Query 013144
Match_columns 449
No_of_seqs 408 out of 2281
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 00:51:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013144.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013144hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 9.8E-36 2.1E-40 271.5 31.2 268 95-390 9-276 (394)
2 COG2271 UhpC Sugar phosphate p 100.0 2.2E-36 4.8E-41 271.6 25.5 320 92-422 22-344 (448)
3 KOG2532 Permease of the major 100.0 2.7E-35 5.9E-40 280.4 33.8 317 126-448 65-384 (466)
4 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.7E-34 3.7E-39 277.1 33.5 293 95-390 4-309 (412)
5 TIGR00894 2A0114euk Na(+)-depe 100.0 3E-33 6.5E-38 273.6 35.1 296 93-394 13-331 (465)
6 PRK14995 methyl viologen resis 100.0 1.6E-33 3.5E-38 276.7 32.4 291 96-390 3-325 (495)
7 PRK03545 putative arabinose tr 100.0 3.9E-33 8.5E-38 266.6 31.7 267 95-390 5-271 (390)
8 PRK09556 uhpT sugar phosphate 100.0 1.6E-33 3.5E-38 275.2 28.4 292 94-390 24-324 (467)
9 PLN00028 nitrate transmembrane 100.0 1.4E-31 2.9E-36 261.4 36.7 305 97-421 34-347 (476)
10 PRK11663 regulatory protein Uh 100.0 6.7E-32 1.4E-36 261.2 32.2 289 95-389 19-308 (434)
11 TIGR00903 2A0129 major facilit 100.0 6E-32 1.3E-36 254.2 28.8 252 110-390 2-253 (368)
12 PRK10213 nepI ribonucleoside t 100.0 2.7E-31 5.8E-36 253.4 33.5 264 97-390 18-282 (394)
13 TIGR00893 2A0114 d-galactonate 100.0 1.8E-31 3.8E-36 255.8 31.4 280 108-391 3-282 (399)
14 PRK10406 alpha-ketoglutarate t 100.0 1.8E-31 4E-36 258.1 30.9 269 95-390 18-309 (432)
15 TIGR01299 synapt_SV2 synaptic 100.0 5.5E-31 1.2E-35 263.5 34.8 257 94-353 162-474 (742)
16 TIGR00711 efflux_EmrB drug res 100.0 2.1E-31 4.6E-36 262.4 30.0 306 100-417 3-339 (485)
17 PRK11551 putative 3-hydroxyphe 100.0 7.1E-31 1.5E-35 252.7 31.6 273 94-390 10-285 (406)
18 COG2223 NarK Nitrate/nitrite t 100.0 3.6E-31 7.8E-36 238.6 27.1 271 94-390 9-284 (417)
19 TIGR00710 efflux_Bcr_CflA drug 100.0 1.2E-30 2.7E-35 249.2 32.2 265 102-390 8-272 (385)
20 PRK15034 nitrate/nitrite trans 100.0 1.9E-30 4.1E-35 245.5 32.6 267 93-390 28-316 (462)
21 PRK10091 MFS transport protein 100.0 1E-30 2.2E-35 249.0 29.9 261 101-390 5-265 (382)
22 TIGR00886 2A0108 nitrite extru 100.0 1.9E-30 4.2E-35 246.2 31.1 275 102-390 4-291 (366)
23 TIGR00891 2A0112 putative sial 100.0 1.6E-30 3.5E-35 250.1 30.7 293 94-390 7-304 (405)
24 PRK15402 multidrug efflux syst 100.0 1.6E-30 3.6E-35 249.9 30.5 274 94-390 8-281 (406)
25 PRK09705 cynX putative cyanate 100.0 2.7E-30 5.9E-35 246.7 30.9 262 97-390 8-270 (393)
26 PRK03699 putative transporter; 100.0 3E-30 6.6E-35 246.8 31.1 267 96-390 4-271 (394)
27 TIGR00890 2A0111 Oxalate/Forma 100.0 2E-30 4.3E-35 246.9 29.6 260 107-390 11-270 (377)
28 PRK10642 proline/glycine betai 100.0 2.5E-30 5.4E-35 253.9 30.5 278 98-390 15-316 (490)
29 KOG1330 Sugar transporter/spin 100.0 8.7E-32 1.9E-36 244.3 16.6 282 94-390 28-313 (493)
30 PRK11273 glpT sn-glycerol-3-ph 100.0 1.3E-29 2.9E-34 246.5 33.2 291 94-389 24-318 (452)
31 PRK12307 putative sialic acid 100.0 6.4E-30 1.4E-34 247.6 30.7 280 95-390 14-296 (426)
32 PRK15403 multidrug efflux syst 100.0 1E-29 2.2E-34 244.0 31.5 264 101-387 18-281 (413)
33 TIGR00900 2A0121 H+ Antiporter 100.0 1.8E-29 3.9E-34 239.3 32.1 289 104-420 4-298 (365)
34 PRK10133 L-fucose transporter; 100.0 4.7E-29 1E-33 240.6 34.2 271 97-390 24-325 (438)
35 TIGR00881 2A0104 phosphoglycer 100.0 2.8E-30 6.2E-35 246.0 24.7 279 107-390 3-282 (379)
36 KOG2533 Permease of the major 100.0 4.9E-30 1.1E-34 244.9 26.1 293 92-388 38-337 (495)
37 PF07690 MFS_1: Major Facilita 100.0 9.2E-31 2E-35 246.9 21.0 269 105-390 2-273 (352)
38 PRK10473 multidrug efflux syst 100.0 3.9E-29 8.4E-34 239.3 32.3 263 103-390 7-269 (392)
39 PRK10504 putative transporter; 100.0 3.8E-29 8.3E-34 245.2 31.3 288 100-390 11-327 (471)
40 TIGR00892 2A0113 monocarboxyla 100.0 1.4E-29 3.1E-34 245.9 28.0 287 95-387 15-303 (455)
41 PRK09952 shikimate transporter 100.0 4.4E-29 9.5E-34 241.6 30.7 276 93-390 16-316 (438)
42 PRK11102 bicyclomycin/multidru 100.0 2.9E-29 6.2E-34 239.1 28.8 256 113-390 5-260 (377)
43 TIGR00895 2A0115 benzoate tran 100.0 3.8E-29 8.1E-34 240.0 28.6 293 95-390 13-315 (398)
44 PRK15075 citrate-proton sympor 100.0 1.5E-28 3.3E-33 238.0 30.8 269 97-390 13-304 (434)
45 PRK11652 emrD multidrug resist 100.0 4.1E-28 8.8E-33 232.4 33.2 268 97-390 6-273 (394)
46 TIGR00712 glpT glycerol-3-phos 100.0 3.6E-28 7.7E-33 235.7 31.4 290 96-390 24-317 (438)
47 TIGR00805 oat sodium-independe 100.0 1.3E-29 2.8E-34 253.2 20.9 290 101-390 35-397 (633)
48 PRK10077 xylE D-xylose transpo 100.0 1.8E-28 3.9E-33 241.2 27.9 305 95-416 8-353 (479)
49 PRK11043 putative transporter; 100.0 1E-27 2.2E-32 230.2 31.2 259 103-390 10-268 (401)
50 TIGR00879 SP MFS transporter, 100.0 1.4E-28 3E-33 241.9 25.7 294 95-390 24-349 (481)
51 TIGR00885 fucP L-fucose:H+ sym 100.0 2.1E-27 4.6E-32 227.1 32.7 289 101-421 5-321 (410)
52 TIGR00887 2A0109 phosphate:H+ 100.0 1.4E-27 3E-32 235.4 32.2 293 94-390 11-365 (502)
53 PRK11195 lysophospholipid tran 100.0 1.4E-27 3E-32 227.8 30.4 265 103-390 7-271 (393)
54 TIGR00897 2A0118 polyol permea 100.0 2.9E-27 6.4E-32 226.7 32.1 266 104-390 18-287 (402)
55 PRK05122 major facilitator sup 100.0 1.7E-27 3.7E-32 228.6 30.4 283 98-423 14-303 (399)
56 TIGR00899 2A0120 sugar efflux 100.0 1.6E-27 3.4E-32 227.0 29.7 258 106-390 4-265 (375)
57 PRK03893 putative sialic acid 100.0 3.6E-27 7.8E-32 232.9 32.3 285 95-390 16-341 (496)
58 PRK03633 putative MFS family t 100.0 6.8E-27 1.5E-31 222.8 30.7 258 101-390 8-265 (381)
59 TIGR00896 CynX cyanate transpo 100.0 2.8E-27 6.2E-32 223.3 27.8 244 116-390 17-262 (355)
60 PRK10489 enterobactin exporter 100.0 3.5E-27 7.7E-32 227.6 24.3 285 107-422 25-312 (417)
61 PRK11646 multidrug resistance 100.0 9.2E-26 2E-30 215.8 33.0 268 117-422 28-297 (400)
62 PRK09874 drug efflux system pr 100.0 7.1E-26 1.5E-30 218.1 32.0 263 102-390 17-288 (408)
63 PRK12382 putative transporter; 100.0 4.6E-26 9.9E-31 218.1 29.2 256 101-390 17-279 (392)
64 TIGR00898 2A0119 cation transp 100.0 7.1E-27 1.5E-31 231.2 24.2 282 120-420 110-406 (505)
65 TIGR00902 2A0127 phenyl propri 100.0 5E-26 1.1E-30 216.7 28.5 283 104-424 9-295 (382)
66 cd06174 MFS The Major Facilita 100.0 7.4E-26 1.6E-30 213.2 28.8 263 103-423 3-266 (352)
67 PRK15011 sugar efflux transpor 99.9 7E-25 1.5E-29 209.7 32.3 253 108-390 24-282 (393)
68 PRK10054 putative transporter; 99.9 1.6E-25 3.4E-30 213.9 27.2 277 105-417 13-292 (395)
69 TIGR00883 2A0106 metabolite-pr 99.9 1.7E-25 3.6E-30 214.3 27.1 258 109-390 3-285 (394)
70 PRK11128 putative 3-phenylprop 99.9 2.7E-25 5.8E-30 211.8 28.3 278 108-423 13-294 (382)
71 TIGR00901 2A0125 AmpG-related 99.9 5.4E-25 1.2E-29 207.9 30.0 252 116-390 5-275 (356)
72 PRK11010 ampG muropeptide tran 99.9 9.8E-25 2.1E-29 213.5 32.3 265 103-390 16-289 (491)
73 KOG2504 Monocarboxylate transp 99.9 4.8E-25 1E-29 213.0 27.3 321 94-426 41-392 (509)
74 PF06609 TRI12: Fungal trichot 99.9 1.2E-24 2.6E-29 210.2 29.9 288 98-390 43-379 (599)
75 TIGR00806 rfc RFC reduced fola 99.9 2.8E-24 6.1E-29 199.6 30.7 313 114-437 41-368 (511)
76 KOG0254 Predicted transporter 99.9 3.8E-25 8.3E-30 218.1 26.2 306 98-417 44-377 (513)
77 COG0738 FucP Fucose permease [ 99.9 1.4E-23 2.9E-28 188.5 31.3 269 99-390 13-302 (422)
78 KOG3764 Vesicular amine transp 99.9 7.6E-26 1.6E-30 201.3 16.7 264 126-423 98-362 (464)
79 PRK11902 ampG muropeptide tran 99.9 9.7E-24 2.1E-28 202.5 31.2 264 104-390 4-276 (402)
80 PRK08633 2-acyl-glycerophospho 99.9 2.3E-24 5.1E-29 233.7 27.7 258 116-390 27-299 (1146)
81 COG2807 CynX Cyanate permease 99.9 2.1E-23 4.5E-28 184.4 27.9 285 98-421 11-296 (395)
82 PRK06814 acylglycerophosphoeth 99.9 4E-24 8.6E-29 231.1 28.6 269 102-390 18-291 (1140)
83 TIGR00882 2A0105 oligosacchari 99.9 2.8E-23 6E-28 199.1 30.5 293 103-423 6-308 (396)
84 KOG0253 Synaptic vesicle trans 99.9 2.6E-23 5.6E-28 182.9 27.0 340 93-446 72-458 (528)
85 KOG0569 Permease of the major 99.9 9.6E-24 2.1E-28 199.0 24.7 309 98-417 10-353 (485)
86 PF05977 MFS_3: Transmembrane 99.9 1.6E-23 3.6E-28 203.3 26.6 300 100-428 11-313 (524)
87 PRK09528 lacY galactoside perm 99.9 3.7E-23 8E-28 199.7 26.0 289 107-423 18-316 (420)
88 PRK10207 dipeptide/tripeptide 99.9 1.1E-21 2.4E-26 191.2 30.5 162 101-264 16-182 (489)
89 PTZ00207 hypothetical protein; 99.9 2.5E-21 5.4E-26 188.7 30.4 295 93-391 22-422 (591)
90 TIGR00924 yjdL_sub1_fam amino 99.9 5.1E-21 1.1E-25 186.5 31.1 311 102-416 13-366 (475)
91 TIGR00792 gph sugar (Glycoside 99.9 7.8E-22 1.7E-26 191.8 25.3 250 120-390 21-287 (437)
92 TIGR00889 2A0110 nucleoside tr 99.9 2.5E-21 5.4E-26 186.0 26.7 276 104-418 7-300 (418)
93 TIGR02718 sider_RhtX_FptX side 99.9 2.1E-20 4.6E-25 178.7 32.5 265 101-390 3-274 (390)
94 KOG0255 Synaptic vesicle trans 99.9 7.8E-22 1.7E-26 195.7 22.1 277 126-421 110-402 (521)
95 KOG2615 Permease of the major 99.9 1.2E-21 2.6E-26 173.7 18.5 251 127-388 61-325 (451)
96 KOG0252 Inorganic phosphate tr 99.9 3.1E-22 6.8E-27 181.6 12.0 338 92-441 34-424 (538)
97 PRK09584 tppB putative tripept 99.9 7.4E-19 1.6E-23 172.3 28.6 164 103-267 25-192 (500)
98 TIGR01301 GPH_sucrose GPH fami 99.8 6.4E-18 1.4E-22 161.6 30.3 292 102-416 7-353 (477)
99 PF00083 Sugar_tr: Sugar (and 99.8 1.4E-24 3E-29 211.9 -16.1 280 105-390 6-316 (451)
100 KOG2563 Permease of the major 99.8 2.1E-18 4.5E-23 157.1 25.1 280 92-390 38-331 (480)
101 PRK15462 dipeptide/tripeptide 99.8 2.9E-17 6.2E-22 157.9 29.6 168 103-271 13-184 (493)
102 PRK09669 putative symporter Ya 99.8 1.6E-17 3.4E-22 161.6 27.6 248 119-390 30-294 (444)
103 KOG4686 Predicted sugar transp 99.8 4.1E-19 9E-24 151.2 13.8 281 94-390 39-330 (459)
104 PF13347 MFS_2: MFS/sugar tran 99.8 3.6E-18 7.8E-23 165.2 22.1 269 120-419 23-310 (428)
105 PF03825 Nuc_H_symport: Nucleo 99.8 2E-16 4.3E-21 149.6 28.2 280 106-419 9-293 (400)
106 KOG3626 Organic anion transpor 99.8 9.7E-18 2.1E-22 163.5 17.9 292 99-390 97-459 (735)
107 PRK10429 melibiose:sodium symp 99.8 1.1E-16 2.4E-21 156.7 25.3 251 121-390 29-296 (473)
108 PRK09848 glucuronide transport 99.8 3.7E-16 8.1E-21 152.2 26.8 246 121-390 31-294 (448)
109 TIGR01272 gluP glucose/galacto 99.8 3.6E-16 7.8E-21 143.7 24.5 182 187-390 8-208 (310)
110 PF01306 LacY_symp: LacY proto 99.8 4.3E-16 9.4E-21 144.6 24.6 291 106-424 14-314 (412)
111 TIGR00788 fbt folate/biopterin 99.7 1E-16 2.2E-21 155.9 20.6 294 100-413 27-332 (468)
112 PF03137 OATP: Organic Anion T 99.7 1.8E-19 4E-24 175.8 -0.4 288 103-390 7-372 (539)
113 PRK11462 putative transporter; 99.7 6.7E-15 1.5E-19 143.1 30.1 245 121-390 32-293 (460)
114 COG2211 MelB Na+/melibiose sym 99.7 1.5E-14 3.3E-19 135.7 27.7 272 121-420 35-323 (467)
115 COG3104 PTR2 Dipeptide/tripept 99.7 7.6E-15 1.6E-19 136.5 23.4 176 101-276 23-206 (498)
116 PF11700 ATG22: Vacuole efflux 99.7 8.6E-14 1.9E-18 134.3 30.6 242 134-390 70-347 (477)
117 TIGR00880 2_A_01_02 Multidrug 99.7 3.2E-16 7E-21 126.7 11.2 137 140-278 4-140 (141)
118 TIGR00889 2A0110 nucleoside tr 99.7 1.5E-15 3.2E-20 146.2 17.3 160 121-280 230-406 (418)
119 KOG2325 Predicted transporter/ 99.7 2.9E-14 6.2E-19 134.1 24.6 257 96-368 31-306 (488)
120 PF05631 DUF791: Protein of un 99.7 7.3E-14 1.6E-18 125.5 25.0 244 117-386 52-304 (354)
121 PF03209 PUCC: PUCC protein; 99.6 1.7E-13 3.7E-18 125.1 24.9 242 125-386 6-270 (403)
122 PRK05122 major facilitator sup 99.6 2.7E-14 5.9E-19 137.1 21.0 156 121-280 238-393 (399)
123 TIGR00890 2A0111 Oxalate/Forma 99.6 5.5E-15 1.2E-19 140.6 15.3 149 120-268 226-374 (377)
124 PRK09528 lacY galactoside perm 99.6 5.3E-15 1.2E-19 142.9 15.0 151 128-280 256-407 (420)
125 PRK15011 sugar efflux transpor 99.6 4.2E-14 9.1E-19 135.3 19.9 153 120-275 237-390 (393)
126 TIGR01299 synapt_SV2 synaptic 99.6 4.1E-14 8.9E-19 142.7 19.2 140 137-280 598-737 (742)
127 TIGR00902 2A0127 phenyl propri 99.6 7.6E-14 1.7E-18 133.0 20.0 151 117-271 223-374 (382)
128 PRK11551 putative 3-hydroxyphe 99.6 4.2E-14 9.2E-19 136.1 17.9 156 118-275 239-395 (406)
129 PRK10642 proline/glycine betai 99.6 1.9E-13 4.1E-18 134.6 22.7 165 117-282 268-435 (490)
130 PRK12382 putative transporter; 99.6 1.1E-13 2.4E-18 132.6 20.2 152 121-276 238-389 (392)
131 PRK09874 drug efflux system pr 99.6 3.7E-14 8.1E-19 136.6 15.9 156 119-276 239-398 (408)
132 cd06174 MFS The Major Facilita 99.6 8.5E-14 1.8E-18 131.0 17.4 163 109-273 185-349 (352)
133 PRK10489 enterobactin exporter 99.6 1.6E-13 3.4E-18 132.6 18.8 161 119-281 243-404 (417)
134 TIGR00899 2A0120 sugar efflux 99.6 2.9E-13 6.4E-18 128.8 20.2 148 124-274 225-372 (375)
135 PRK03633 putative MFS family t 99.5 7.9E-13 1.7E-17 126.1 21.0 149 121-274 222-370 (381)
136 KOG2816 Predicted transporter 99.5 9.6E-13 2.1E-17 125.6 21.3 305 98-425 21-334 (463)
137 PRK03545 putative arabinose tr 99.5 5.7E-13 1.2E-17 127.5 19.9 153 121-277 228-381 (390)
138 PRK09556 uhpT sugar phosphate 99.5 2.5E-13 5.4E-18 133.0 17.5 172 104-275 263-448 (467)
139 PRK03893 putative sialic acid 99.5 1.1E-13 2.3E-18 137.0 15.0 150 118-267 294-444 (496)
140 TIGR00892 2A0113 monocarboxyla 99.5 7.4E-14 1.6E-18 136.0 13.0 152 117-270 259-415 (455)
141 PRK09705 cynX putative cyanate 99.5 9.7E-13 2.1E-17 125.9 20.2 163 117-282 223-387 (393)
142 COG2270 Permeases of the major 99.5 8.2E-12 1.8E-16 113.9 24.6 243 132-390 56-318 (438)
143 TIGR00893 2A0114 d-galactonate 99.5 5.5E-13 1.2E-17 127.7 18.2 163 108-273 224-396 (399)
144 PRK03699 putative transporter; 99.5 4.6E-13 9.9E-18 128.3 17.2 156 117-275 223-379 (394)
145 TIGR00883 2A0106 metabolite-pr 99.5 2E-13 4.4E-18 130.6 14.1 158 109-266 229-391 (394)
146 TIGR00879 SP MFS transporter, 99.5 4.3E-13 9.2E-18 131.9 16.6 181 100-280 285-474 (481)
147 TIGR00897 2A0118 polyol permea 99.5 1.7E-12 3.7E-17 124.7 19.1 160 114-275 237-400 (402)
148 PRK11663 regulatory protein Uh 99.5 2.4E-12 5.1E-17 124.9 19.7 162 116-277 260-425 (434)
149 PRK11128 putative 3-phenylprop 99.5 3.1E-12 6.8E-17 122.0 19.6 145 121-269 227-372 (382)
150 PRK11273 glpT sn-glycerol-3-ph 99.5 2.4E-12 5.1E-17 125.6 17.7 159 117-275 271-434 (452)
151 TIGR00891 2A0112 putative sial 99.5 8.1E-13 1.8E-17 127.1 13.7 136 123-260 263-400 (405)
152 PRK11010 ampG muropeptide tran 99.5 7E-11 1.5E-15 116.1 27.0 155 121-276 245-403 (491)
153 PF01770 Folate_carrier: Reduc 99.4 4.5E-10 9.7E-15 104.2 29.9 304 120-434 25-352 (412)
154 PRK12307 putative sialic acid 99.4 2.7E-12 5.9E-17 124.4 16.3 143 118-260 250-392 (426)
155 PRK10077 xylE D-xylose transpo 99.4 6.8E-12 1.5E-16 123.6 19.3 164 117-280 289-461 (479)
156 COG2814 AraJ Arabinose efflux 99.4 1.1E-11 2.3E-16 114.4 19.0 165 109-276 222-386 (394)
157 TIGR00882 2A0105 oligosacchari 99.4 6.6E-12 1.4E-16 120.4 17.0 143 130-274 250-393 (396)
158 PRK09952 shikimate transporter 99.4 1.8E-11 3.9E-16 118.8 19.8 152 124-275 276-432 (438)
159 TIGR00900 2A0121 H+ Antiporter 99.4 4.6E-12 9.9E-17 120.0 14.6 132 120-253 232-365 (365)
160 TIGR00895 2A0115 benzoate tran 99.4 3.1E-12 6.8E-17 122.6 13.5 137 110-248 261-397 (398)
161 PF05977 MFS_3: Transmembrane 99.4 2.4E-11 5.1E-16 118.7 19.3 153 118-272 237-390 (524)
162 PF11700 ATG22: Vacuole efflux 99.4 3.7E-11 8.1E-16 116.1 19.8 159 115-275 298-467 (477)
163 PRK10054 putative transporter; 99.4 1.3E-11 2.8E-16 118.1 16.2 152 127-280 237-388 (395)
164 TIGR02718 sider_RhtX_FptX side 99.4 2.1E-11 4.6E-16 116.7 17.4 150 121-270 230-385 (390)
165 PRK10504 putative transporter; 99.4 2E-11 4.2E-16 120.0 16.7 139 116-254 278-418 (471)
166 KOG2504 Monocarboxylate transp 99.4 1.1E-11 2.3E-16 120.6 14.5 176 99-276 298-476 (509)
167 TIGR00792 gph sugar (Glycoside 99.3 2.3E-11 5E-16 118.3 16.1 132 122-255 245-384 (437)
168 PRK15075 citrate-proton sympor 99.3 6.8E-11 1.5E-15 114.8 18.8 142 115-256 254-399 (434)
169 PF01306 LacY_symp: LacY proto 99.3 6E-11 1.3E-15 110.6 17.2 153 127-281 252-405 (412)
170 TIGR00887 2A0109 phosphate:H+ 99.3 1E-11 2.2E-16 122.7 13.1 164 117-281 306-493 (502)
171 TIGR00712 glpT glycerol-3-phos 99.3 3E-11 6.6E-16 117.4 16.0 161 119-279 271-436 (438)
172 PRK15402 multidrug efflux syst 99.3 5.5E-11 1.2E-15 114.5 17.4 154 122-276 238-395 (406)
173 TIGR00881 2A0104 phosphoglycer 99.3 3.2E-11 7E-16 114.7 15.6 142 117-258 234-379 (379)
174 PF06813 Nodulin-like: Nodulin 99.3 4.5E-11 9.8E-16 104.3 15.0 152 97-251 1-157 (250)
175 COG2271 UhpC Sugar phosphate p 99.3 1.8E-11 4E-16 111.5 12.7 179 99-277 252-435 (448)
176 TIGR01272 gluP glucose/galacto 99.3 1.9E-10 4.1E-15 105.9 19.1 154 105-263 146-302 (310)
177 PRK10213 nepI ribonucleoside t 99.3 2.1E-10 4.6E-15 109.7 19.8 146 122-271 240-386 (394)
178 PRK10091 MFS transport protein 99.3 1.8E-10 3.8E-15 109.9 19.1 152 121-275 222-375 (382)
179 TIGR00926 2A1704 Peptide:H+ sy 99.3 5.5E-09 1.2E-13 104.6 28.9 157 120-276 9-182 (654)
180 PRK11902 ampG muropeptide tran 99.3 2E-10 4.4E-15 110.3 17.9 149 122-275 233-389 (402)
181 PRK10406 alpha-ketoglutarate t 99.3 3.5E-10 7.7E-15 109.7 19.7 156 118-274 262-422 (432)
182 PRK11646 multidrug resistance 99.3 8.7E-11 1.9E-15 112.6 15.2 151 120-272 229-384 (400)
183 TIGR00898 2A0119 cation transp 99.3 3E-10 6.5E-15 112.7 18.4 149 126-280 350-498 (505)
184 TIGR00896 CynX cyanate transpo 99.3 2E-10 4.4E-15 108.4 16.4 133 118-253 216-350 (355)
185 PF03825 Nuc_H_symport: Nucleo 99.3 4.7E-10 1E-14 106.4 18.5 166 112-278 220-397 (400)
186 PLN00028 nitrate transmembrane 99.2 1.3E-10 2.7E-15 114.0 14.7 148 124-275 278-432 (476)
187 KOG0569 Permease of the major 99.2 5.8E-11 1.3E-15 112.9 11.6 181 102-283 273-461 (485)
188 PF03092 BT1: BT1 family; Int 99.2 3.1E-10 6.7E-15 109.2 15.8 160 118-278 9-177 (433)
189 PRK09848 glucuronide transport 99.2 4.5E-10 9.8E-15 109.5 17.1 138 117-254 246-391 (448)
190 TIGR02332 HpaX 4-hydroxyphenyl 99.2 1.9E-10 4.2E-15 110.7 14.1 159 105-265 248-410 (412)
191 COG2223 NarK Nitrate/nitrite t 99.2 4.5E-10 9.7E-15 102.7 14.9 173 103-276 222-401 (417)
192 PRK08633 2-acyl-glycerophospho 99.2 4E-10 8.7E-15 123.0 17.4 143 122-266 256-400 (1146)
193 COG2270 Permeases of the major 99.2 4.1E-10 8.8E-15 103.0 14.1 154 118-273 272-426 (438)
194 PRK14995 methyl viologen resis 99.2 1.3E-09 2.8E-14 107.6 18.1 131 120-250 280-412 (495)
195 TIGR00711 efflux_EmrB drug res 99.2 4.7E-10 1E-14 110.7 14.7 134 119-252 275-411 (485)
196 PRK15034 nitrate/nitrite trans 99.2 1.7E-09 3.7E-14 103.4 17.5 160 117-277 270-455 (462)
197 PRK10473 multidrug efflux syst 99.2 2.4E-09 5.2E-14 102.6 18.4 134 125-265 230-363 (392)
198 PRK10133 L-fucose transporter; 99.2 2.2E-09 4.8E-14 104.0 18.2 140 126-270 287-427 (438)
199 TIGR00769 AAA ADP/ATP carrier 99.1 1.8E-07 3.9E-12 89.7 30.3 273 101-390 9-333 (472)
200 PRK11195 lysophospholipid tran 99.1 2.7E-09 5.8E-14 102.1 17.8 140 124-267 231-371 (393)
201 TIGR00710 efflux_Bcr_CflA drug 99.1 1.9E-09 4.2E-14 102.9 16.4 138 121-260 228-370 (385)
202 PF07690 MFS_1: Major Facilita 99.1 8.8E-10 1.9E-14 103.8 12.6 126 117-242 224-352 (352)
203 PRK09669 putative symporter Ya 99.1 2.4E-09 5.1E-14 104.3 15.6 123 133-255 263-392 (444)
204 TIGR00894 2A0114euk Na(+)-depe 99.1 9.2E-10 2E-14 108.0 12.8 172 102-275 264-449 (465)
205 KOG0253 Synaptic vesicle trans 99.1 1.1E-09 2.5E-14 97.7 11.9 131 143-279 390-522 (528)
206 PRK10429 melibiose:sodium symp 99.1 5.4E-09 1.2E-13 102.5 18.0 141 114-254 246-396 (473)
207 COG0477 ProP Permeases of the 99.1 6.6E-09 1.4E-13 95.6 17.5 157 109-267 12-176 (338)
208 PRK06814 acylglycerophosphoeth 99.1 1.7E-09 3.7E-14 117.8 15.3 147 121-267 247-413 (1140)
209 TIGR00901 2A0125 AmpG-related 99.1 9E-10 1.9E-14 104.1 11.5 119 117-235 227-355 (356)
210 PF13347 MFS_2: MFS/sugar tran 99.1 4.5E-09 9.8E-14 101.9 15.9 152 104-255 230-388 (428)
211 PRK11043 putative transporter; 99.1 8.8E-09 1.9E-13 99.0 17.8 135 120-255 224-361 (401)
212 TIGR00903 2A0129 major facilit 99.1 5.7E-09 1.2E-13 98.6 16.1 159 107-273 200-362 (368)
213 KOG4686 Predicted sugar transp 99.0 3.2E-09 6.9E-14 91.5 12.2 164 99-268 267-435 (459)
214 KOG0637 Sucrose transporter an 99.0 1.2E-08 2.7E-13 94.0 16.8 272 101-390 34-362 (498)
215 PRK11102 bicyclomycin/multidru 99.0 1E-08 2.3E-13 97.6 17.0 122 124-246 220-344 (377)
216 TIGR00924 yjdL_sub1_fam amino 99.0 2.1E-08 4.5E-13 98.2 18.5 141 136-276 314-468 (475)
217 KOG3762 Predicted transporter 98.9 6.8E-09 1.5E-13 97.5 10.4 153 121-275 393-546 (618)
218 COG2807 CynX Cyanate permease 98.9 1.2E-07 2.6E-12 85.3 17.1 178 92-276 205-385 (395)
219 TIGR00788 fbt folate/biopterin 98.9 2.4E-08 5.2E-13 97.5 13.8 127 127-253 281-415 (468)
220 KOG3764 Vesicular amine transp 98.9 6.9E-09 1.5E-13 93.9 8.4 165 109-275 280-453 (464)
221 TIGR00885 fucP L-fucose:H+ sym 98.9 1.3E-07 2.8E-12 90.8 17.8 137 120-261 253-397 (410)
222 PRK11462 putative transporter; 98.9 1.5E-07 3.3E-12 91.8 18.4 123 132-254 261-390 (460)
223 PRK11652 emrD multidrug resist 98.9 1.1E-07 2.3E-12 91.3 16.9 127 124-251 233-360 (394)
224 COG2211 MelB Na+/melibiose sym 98.8 4.5E-07 9.7E-12 85.9 19.1 148 107-254 244-399 (467)
225 PRK09584 tppB putative tripept 98.8 1.5E-07 3.3E-12 92.7 16.2 138 135-274 317-477 (500)
226 PF06963 FPN1: Ferroportin1 (F 98.8 5.5E-06 1.2E-10 78.6 24.9 288 101-390 4-323 (432)
227 TIGR00886 2A0108 nitrite extru 98.8 7.1E-08 1.5E-12 91.4 12.2 113 124-237 251-365 (366)
228 COG0738 FucP Fucose permease [ 98.7 3.9E-07 8.4E-12 83.3 15.2 160 105-269 242-402 (422)
229 PF03209 PUCC: PUCC protein; 98.7 1.8E-06 4E-11 79.6 17.5 154 119-272 228-394 (403)
230 PF00083 Sugar_tr: Sugar (and 98.7 2.8E-10 6E-15 111.2 -8.1 163 117-282 271-442 (451)
231 PRK10207 dipeptide/tripeptide 98.7 1.1E-06 2.4E-11 86.2 17.0 140 136-275 311-475 (489)
232 PRK15403 multidrug efflux syst 98.6 1.3E-06 2.9E-11 84.1 16.9 151 117-269 236-390 (413)
233 KOG3098 Uncharacterized conser 98.6 3.6E-06 7.8E-11 79.9 19.1 106 140-248 56-161 (461)
234 PF02487 CLN3: CLN3 protein; 98.6 1.1E-05 2.4E-10 75.3 21.9 137 136-280 61-199 (402)
235 PF03219 TLC: TLC ATP/ADP tran 98.6 0.00017 3.8E-09 69.8 30.0 280 97-390 22-349 (491)
236 PF05978 UNC-93: Ion channel r 98.6 2.3E-06 5.1E-11 69.1 14.5 109 138-249 41-149 (156)
237 KOG2532 Permease of the major 98.6 2.7E-07 5.8E-12 89.0 10.6 176 99-276 258-447 (466)
238 KOG0252 Inorganic phosphate tr 98.6 1.7E-07 3.7E-12 86.7 7.7 182 99-281 304-502 (538)
239 KOG4332 Predicted sugar transp 98.6 1.6E-06 3.4E-11 74.6 12.9 141 115-260 53-204 (454)
240 PF06779 DUF1228: Protein of u 98.5 2.6E-07 5.6E-12 65.3 6.4 80 111-192 4-83 (85)
241 PF06609 TRI12: Fungal trichot 98.5 6.7E-06 1.4E-10 80.9 16.8 149 100-248 311-464 (599)
242 KOG3810 Micronutrient transpor 98.4 2.4E-06 5.3E-11 76.2 11.2 281 128-429 35-333 (433)
243 KOG0254 Predicted transporter 98.4 7.5E-06 1.6E-10 81.3 16.3 177 104-281 300-488 (513)
244 PTZ00207 hypothetical protein; 98.4 9.9E-06 2.1E-10 80.2 15.8 173 100-276 354-552 (591)
245 TIGR01301 GPH_sucrose GPH fami 98.4 2.7E-05 5.9E-10 75.3 18.5 142 138-281 309-476 (477)
246 KOG3574 Acetyl-CoA transporter 98.4 2E-05 4.3E-10 71.4 16.0 263 98-387 30-323 (510)
247 PF12832 MFS_1_like: MFS_1 lik 98.3 2.9E-06 6.3E-11 59.6 7.0 71 104-174 5-75 (77)
248 COG3202 ATP/ADP translocase [E 98.3 0.0042 9.2E-08 58.9 29.7 279 97-390 25-352 (509)
249 KOG2533 Permease of the major 98.2 3.8E-06 8.2E-11 81.4 7.2 160 100-261 274-441 (495)
250 KOG2615 Permease of the major 98.1 3E-05 6.5E-10 70.5 11.5 123 126-250 289-413 (451)
251 KOG0255 Synaptic vesicle trans 98.1 0.00025 5.3E-09 70.8 19.3 160 121-284 340-500 (521)
252 PRK15462 dipeptide/tripeptide 98.1 0.00017 3.6E-09 70.3 17.1 134 135-268 309-469 (493)
253 PF12832 MFS_1_like: MFS_1 lik 98.0 4.7E-05 1E-09 53.5 8.3 62 328-390 4-65 (77)
254 KOG2816 Predicted transporter 97.9 0.00012 2.6E-09 70.6 12.3 126 122-250 265-391 (463)
255 PF00854 PTR2: POT family; In 97.9 5.1E-05 1.1E-09 72.1 9.5 111 165-275 2-122 (372)
256 KOG3762 Predicted transporter 97.9 8E-05 1.7E-09 70.8 9.1 84 101-184 13-97 (618)
257 PF02487 CLN3: CLN3 protein; 97.8 0.0015 3.1E-08 61.4 17.1 142 103-249 251-395 (402)
258 PF13000 Acatn: Acetyl-coenzym 97.8 0.0024 5.2E-08 60.7 17.3 284 102-390 3-339 (544)
259 KOG1237 H+/oligopeptide sympor 97.7 0.00081 1.7E-08 66.7 13.2 179 97-275 35-244 (571)
260 COG3104 PTR2 Dipeptide/tripept 97.6 0.0025 5.5E-08 60.6 15.2 142 134-275 324-486 (498)
261 PRK03612 spermidine synthase; 97.6 0.0054 1.2E-07 60.6 17.7 141 127-269 43-190 (521)
262 KOG3097 Predicted membrane pro 97.5 0.03 6.5E-07 50.3 18.9 68 148-218 72-139 (390)
263 KOG2563 Permease of the major 97.3 0.00033 7.1E-09 65.4 5.0 178 101-278 268-452 (480)
264 TIGR00806 rfc RFC reduced fola 97.0 0.0054 1.2E-07 58.7 10.4 70 344-422 45-115 (511)
265 PF03092 BT1: BT1 family; Int 97.0 0.0037 8.1E-08 60.5 9.6 145 131-275 252-412 (433)
266 PF07672 MFS_Mycoplasma: Mycop 97.0 0.008 1.7E-07 52.3 10.4 101 221-337 2-107 (267)
267 PF06963 FPN1: Ferroportin1 (F 97.0 0.0091 2E-07 57.1 11.7 144 105-248 264-415 (432)
268 KOG3098 Uncharacterized conser 96.8 0.078 1.7E-06 50.9 16.4 143 105-248 246-411 (461)
269 PF06779 DUF1228: Protein of u 96.8 0.01 2.2E-07 42.2 7.8 77 337-423 5-81 (85)
270 TIGR00939 2a57 Equilibrative N 96.7 0.13 2.9E-06 49.7 16.8 113 135-248 308-431 (437)
271 KOG1330 Sugar transporter/spin 96.5 0.011 2.5E-07 55.7 8.3 126 130-255 279-417 (493)
272 KOG2325 Predicted transporter/ 96.3 0.0092 2E-07 57.4 6.3 84 189-272 387-471 (488)
273 TIGR00805 oat sodium-independe 96.1 0.015 3.2E-07 59.3 7.0 69 341-418 49-117 (633)
274 KOG1479 Nucleoside transporter 95.9 0.16 3.4E-06 47.7 12.1 120 101-223 20-150 (406)
275 TIGR00939 2a57 Equilibrative N 95.8 0.21 4.5E-06 48.3 13.0 52 188-244 105-156 (437)
276 PF03137 OATP: Organic Anion T 95.5 0.0036 7.8E-08 62.1 0.0 153 99-251 305-514 (539)
277 PF05631 DUF791: Protein of un 95.5 0.45 9.8E-06 43.9 13.2 37 354-390 63-99 (354)
278 TIGR00880 2_A_01_02 Multidrug 95.2 0.58 1.3E-05 36.6 12.1 37 232-268 5-41 (141)
279 KOG3880 Predicted small molecu 95.2 0.1 2.2E-06 46.6 7.8 140 136-282 64-205 (409)
280 PF01770 Folate_carrier: Reduc 93.7 0.66 1.4E-05 44.0 10.2 99 132-232 283-383 (412)
281 PF06813 Nodulin-like: Nodulin 92.5 0.67 1.4E-05 40.9 8.0 67 339-416 17-83 (250)
282 PF13000 Acatn: Acetyl-coenzym 92.4 2.3 4.9E-05 41.2 11.7 66 191-256 407-472 (544)
283 KOG3626 Organic anion transpor 92.4 2.2 4.7E-05 43.6 12.2 152 100-251 393-649 (735)
284 TIGR00926 2A1704 Peptide:H+ sy 92.3 0.67 1.4E-05 47.3 8.7 100 339-447 2-106 (654)
285 KOG3880 Predicted small molecu 92.3 1.3 2.9E-05 39.9 9.3 140 102-248 254-401 (409)
286 KOG1479 Nucleoside transporter 91.7 2.1 4.5E-05 40.5 10.4 112 132-246 280-400 (406)
287 PF01733 Nucleoside_tran: Nucl 91.6 0.064 1.4E-06 49.4 0.6 110 138-247 186-306 (309)
288 KOG4830 Predicted sugar transp 90.1 0.032 7E-07 48.3 -2.6 61 106-166 24-93 (412)
289 KOG0637 Sucrose transporter an 90.0 0.3 6.5E-06 46.3 3.3 128 137-266 335-486 (498)
290 PRK00293 dipZ thiol:disulfide 89.6 25 0.00055 35.5 21.1 30 358-387 323-352 (571)
291 TIGR00769 AAA ADP/ATP carrier 89.3 23 0.0005 34.7 18.2 72 196-267 273-345 (472)
292 COG1230 CzcD Co/Zn/Cd efflux s 85.5 28 0.0006 31.6 15.1 81 94-180 20-103 (296)
293 PF02990 EMP70: Endomembrane p 85.3 17 0.00036 36.3 12.6 71 318-389 252-322 (521)
294 KOG4332 Predicted sugar transp 85.2 9.1 0.0002 34.0 9.2 135 136-270 284-425 (454)
295 PF07672 MFS_Mycoplasma: Mycop 84.6 15 0.00033 32.5 10.4 101 137-240 144-254 (267)
296 KOG2881 Predicted membrane pro 84.4 28 0.0006 30.6 12.3 16 375-390 255-270 (294)
297 PF06912 DUF1275: Protein of u 83.6 27 0.00059 29.9 16.9 41 221-262 158-198 (209)
298 COG4262 Predicted spermidine s 83.2 39 0.00085 31.4 20.0 152 117-270 25-185 (508)
299 KOG3574 Acetyl-CoA transporter 81.9 7.5 0.00016 36.5 7.7 139 119-257 285-437 (510)
300 PF05978 UNC-93: Ion channel r 79.2 33 0.0007 27.9 10.9 44 365-417 42-85 (156)
301 PRK11715 inner membrane protei 77.0 31 0.00067 33.3 10.5 12 1-12 231-242 (436)
302 PF06123 CreD: Inner membrane 76.7 72 0.0016 30.8 12.9 20 124-143 316-335 (430)
303 PF03219 TLC: TLC ATP/ADP tran 74.7 93 0.002 30.8 18.8 73 196-268 289-362 (491)
304 PRK10263 DNA translocase FtsK; 74.7 39 0.00084 37.3 11.4 25 235-259 141-165 (1355)
305 TIGR00844 c_cpa1 na(+)/h(+) an 74.7 1.2E+02 0.0025 32.0 21.9 35 232-266 108-142 (810)
306 KOG2601 Iron transporter [Inor 74.2 37 0.00081 32.0 9.7 166 102-267 30-217 (503)
307 KOG3810 Micronutrient transpor 72.8 21 0.00046 33.2 7.8 94 137-232 274-369 (433)
308 COG0477 ProP Permeases of the 71.7 30 0.00065 30.7 9.2 52 338-390 16-69 (338)
309 PF01733 Nucleoside_tran: Nucl 68.9 1.3 2.8E-05 40.8 -0.6 40 197-241 5-44 (309)
310 KOG2601 Iron transporter [Inor 68.9 29 0.00063 32.6 7.9 70 323-392 26-95 (503)
311 COG5336 Uncharacterized protei 68.6 15 0.00032 27.3 4.8 27 140-166 48-75 (116)
312 KOG4830 Predicted sugar transp 68.4 3.6 7.9E-05 36.1 2.1 63 328-391 21-92 (412)
313 PF13386 DsbD_2: Cytochrome C 63.5 92 0.002 26.4 17.8 35 356-390 146-180 (199)
314 PF07857 DUF1632: CEO family ( 62.4 70 0.0015 28.4 8.9 36 335-370 189-228 (254)
315 PF12805 FUSC-like: FUSC-like 61.4 65 0.0014 29.2 9.0 37 168-205 3-39 (284)
316 PF07760 DUF1616: Protein of u 61.0 1.2E+02 0.0027 27.5 10.6 82 192-275 22-107 (287)
317 COG3619 Predicted membrane pro 60.5 1.1E+02 0.0025 26.5 19.3 122 132-253 53-196 (226)
318 PRK13629 threonine/serine tran 59.3 1.8E+02 0.0039 28.3 18.4 43 219-266 18-60 (443)
319 PRK10263 DNA translocase FtsK; 55.7 3.3E+02 0.0072 30.6 13.8 21 370-390 141-161 (1355)
320 PF02694 UPF0060: Uncharacteri 53.2 25 0.00053 26.1 3.8 51 134-184 54-104 (107)
321 PRK03612 spermidine synthase; 52.5 2.6E+02 0.0055 28.1 21.2 31 360-390 145-176 (521)
322 PF11947 DUF3464: Protein of u 52.3 1.2E+02 0.0027 24.4 8.0 32 133-164 95-126 (153)
323 COG1457 CodB Purine-cytosine p 51.3 2.4E+02 0.0052 27.4 14.8 147 215-390 11-158 (442)
324 PF03596 Cad: Cadmium resistan 48.6 55 0.0012 27.6 5.7 29 242-270 43-71 (191)
325 KOG2765 Predicted membrane pro 48.4 1.9E+02 0.0042 27.2 9.4 17 158-174 208-224 (416)
326 PF02632 BioY: BioY family; I 48.0 72 0.0016 25.6 6.1 42 140-181 59-100 (148)
327 PF05255 UPF0220: Uncharacteri 47.8 1.3E+02 0.0027 24.8 7.5 59 217-275 14-78 (166)
328 PF11299 DUF3100: Protein of u 47.2 50 0.0011 28.6 5.2 94 154-248 127-229 (241)
329 KOG1237 H+/oligopeptide sympor 47.0 88 0.0019 31.7 7.9 64 188-251 457-520 (571)
330 PRK02237 hypothetical protein; 46.6 43 0.00093 25.0 4.2 51 134-184 56-106 (109)
331 PF02535 Zip: ZIP Zinc transpo 43.4 2.6E+02 0.0056 25.5 16.1 31 189-219 260-291 (317)
332 PF03547 Mem_trans: Membrane t 41.5 3.1E+02 0.0068 25.9 15.3 18 318-335 239-256 (385)
333 PF11947 DUF3464: Protein of u 38.3 77 0.0017 25.5 4.8 51 187-240 95-145 (153)
334 TIGR01666 YCCS hypothetical me 37.5 2.2E+02 0.0047 29.8 9.1 44 161-205 54-97 (704)
335 PTZ00370 STEVOR; Provisional 37.4 1.9E+02 0.0041 26.0 7.4 37 240-276 243-279 (296)
336 PF06638 Strabismus: Strabismu 36.9 1.7E+02 0.0037 28.7 7.6 12 187-198 179-190 (505)
337 COG1268 BioY Uncharacterized c 36.4 90 0.0019 26.1 5.1 24 140-163 88-111 (184)
338 PF04226 Transgly_assoc: Trans 36.1 1.1E+02 0.0024 19.0 5.0 31 240-270 6-40 (48)
339 COG2119 Predicted membrane pro 35.4 2.3E+02 0.005 23.7 7.1 56 124-179 124-179 (190)
340 PF10183 ESSS: ESSS subunit of 35.3 63 0.0014 24.2 3.7 31 250-280 55-85 (105)
341 COG4769 Predicted membrane pro 34.7 90 0.0019 25.4 4.6 54 142-203 81-134 (181)
342 TIGR02230 ATPase_gene1 F0F1-AT 34.6 1.9E+02 0.0041 21.4 6.9 27 227-253 45-71 (100)
343 PF11151 DUF2929: Protein of u 34.5 1.3E+02 0.0029 19.5 5.2 39 235-273 12-50 (57)
344 PF12273 RCR: Chitin synthesis 33.9 19 0.00041 28.2 0.8 17 255-271 1-17 (130)
345 PRK10692 hypothetical protein; 32.3 1.1E+02 0.0025 21.7 4.2 17 163-179 3-19 (92)
346 TIGR01667 YCCS_YHJK integral m 31.7 3.1E+02 0.0067 28.7 9.2 43 162-205 55-97 (701)
347 PF11833 DUF3353: Protein of u 31.5 3.2E+02 0.007 23.1 8.0 31 220-250 136-166 (194)
348 COG0814 SdaC Amino acid permea 30.7 5E+02 0.011 25.1 15.5 26 220-245 9-34 (415)
349 PLN02332 membrane bound O-acyl 30.4 5.4E+02 0.012 25.4 11.1 31 162-194 339-369 (465)
350 COG2076 EmrE Membrane transpor 29.8 2.4E+02 0.0052 21.1 6.8 65 153-218 19-83 (106)
351 PF10785 NADH-u_ox-rdase: NADH 28.7 1.3E+02 0.0029 21.5 4.3 39 146-184 30-75 (86)
352 PRK15049 L-asparagine permease 28.5 5.8E+02 0.013 25.4 10.4 20 253-272 446-465 (499)
353 PF04341 DUF485: Protein of un 27.9 2.4E+02 0.0051 20.4 7.2 39 316-354 6-46 (91)
354 PF10639 UPF0546: Uncharacteri 27.6 92 0.002 23.7 3.5 24 314-337 32-55 (113)
355 COG3202 ATP/ADP translocase [E 26.7 6.4E+02 0.014 25.0 17.7 76 196-271 291-368 (509)
356 PRK10599 calcium/sodium:proton 25.8 4.4E+02 0.0095 25.0 8.3 26 115-140 238-263 (366)
357 COG3559 TnrB3 Putative exporte 25.7 6.2E+02 0.014 24.5 13.7 60 324-383 298-367 (536)
358 PF04024 PspC: PspC domain; I 25.6 2E+02 0.0044 18.9 4.6 33 248-280 20-60 (61)
359 PF10762 DUF2583: Protein of u 25.6 1.4E+02 0.003 21.1 3.7 17 163-179 3-19 (89)
360 PF11368 DUF3169: Protein of u 25.5 4.7E+02 0.01 23.1 11.2 25 224-248 9-33 (248)
361 PF10225 DUF2215: Uncharacteri 25.4 4.8E+02 0.01 23.1 9.7 50 187-240 32-81 (249)
362 KOG1278 Endosomal membrane pro 24.9 89 0.0019 30.9 3.7 33 357-389 356-388 (628)
363 TIGR00836 amt ammonium transpo 24.2 6.5E+02 0.014 24.2 10.5 49 197-245 283-331 (403)
364 PF07556 DUF1538: Protein of u 24.0 4.7E+02 0.01 22.5 7.7 78 187-267 60-139 (212)
365 PF04281 Tom22: Mitochondrial 24.0 3.3E+02 0.0072 21.5 6.1 27 213-239 59-85 (137)
366 TIGR03644 marine_trans_1 proba 23.8 6.6E+02 0.014 24.2 10.9 48 197-245 297-344 (404)
367 COG1113 AnsP Gamma-aminobutyra 23.8 7E+02 0.015 24.4 9.4 23 216-238 196-218 (462)
368 COG2836 Uncharacterized conser 23.5 4.9E+02 0.011 22.6 16.3 34 356-389 160-193 (232)
369 PF02990 EMP70: Endomembrane p 23.3 3.9E+02 0.0086 26.8 8.1 39 219-257 291-332 (521)
370 TIGR00814 stp serine transport 22.8 6.9E+02 0.015 24.0 17.0 27 219-245 2-28 (397)
371 PF13940 Ldr_toxin: Toxin Ldr, 22.6 1.2E+02 0.0026 17.1 2.4 18 368-385 16-33 (35)
372 COG5336 Uncharacterized protei 22.6 3.4E+02 0.0074 20.4 6.5 53 220-272 37-91 (116)
373 PF04547 Anoctamin: Calcium-ac 22.5 7.3E+02 0.016 24.2 12.9 43 314-356 112-154 (452)
374 PF02694 UPF0060: Uncharacteri 22.5 1.1E+02 0.0023 22.9 2.9 31 360-390 54-84 (107)
375 COG0786 GltS Na+/glutamate sym 22.4 6.3E+02 0.014 24.1 8.4 108 135-253 280-389 (404)
376 KOG2887 Membrane protein invol 22.2 4.5E+02 0.0098 21.7 10.8 90 127-227 75-165 (175)
377 TIGR02230 ATPase_gene1 F0F1-AT 22.1 3.1E+02 0.0067 20.4 5.2 25 151-175 59-84 (100)
378 KOG1277 Endosomal membrane pro 21.6 7.7E+02 0.017 24.1 10.2 24 136-159 325-348 (593)
379 PRK14199 camphor resistance pr 21.1 4.1E+02 0.0088 20.7 8.9 13 207-219 80-92 (128)
380 TIGR03727 urea_t_UrtC_arc urea 21.1 4.5E+02 0.0097 24.9 7.6 18 233-250 282-299 (364)
381 PF14362 DUF4407: Domain of un 20.8 4E+02 0.0086 24.3 7.1 10 221-230 10-19 (301)
382 PF13440 Polysacc_synt_3: Poly 20.4 5.5E+02 0.012 22.0 20.6 43 342-385 200-242 (251)
383 PF04550 Phage_holin_2: Phage 20.4 3.4E+02 0.0073 19.5 5.4 33 187-219 29-61 (89)
384 COG2119 Predicted membrane pro 20.3 5.2E+02 0.011 21.7 15.0 21 370-390 144-164 (190)
385 COG4721 ABC-type cobalt transp 20.2 4.9E+02 0.011 21.3 14.0 150 97-265 9-161 (192)
386 PF01810 LysE: LysE type trans 20.1 5.1E+02 0.011 21.5 16.4 21 370-390 143-163 (191)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.8e-36 Score=271.50 Aligned_cols=268 Identities=21% Similarity=0.248 Sum_probs=245.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHH
Q 013144 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (449)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (449)
+..+..+..+.++.|..+.........+|++.+|+|+|..+.|+..|+|.++..+++++...+.||+.||++++..+.++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 33466778888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCc
Q 013144 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (449)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 254 (449)
.+++++++++ +||+.++++|++.|+..|.+++...++..+..|+++|++++++...+..++.++|.+++.++.+.+||
T Consensus 89 i~~n~l~alA--p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GW 166 (394)
T COG2814 89 IVSNLLSALA--PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGW 166 (394)
T ss_pred HHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhH
Confidence 9999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHH
Q 013144 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (449)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (449)
|+.|++.+.++++..+..+...| |++.+. +++....+..+++|+|.++...+..+
T Consensus 167 R~~F~~ia~l~ll~~~~~~~~lP--~~~~~~-----------------------~~~~~~~~~~~~l~~p~v~~~l~~t~ 221 (394)
T COG2814 167 RATFLAIAVLALLALLLLWKLLP--PSEISG-----------------------SLPGPLRTLLRLLRRPGVLLGLLATF 221 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--CccCCC-----------------------CCCcchhHHHHHhcCchHHHHHHHHH
Confidence 99999999999998888888887 221110 11112223448899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 335 MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
+...+.+..++|+..++++..|+|....++.+..++++.++|+.++|++.|| +.|
T Consensus 222 l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~ 276 (394)
T COG2814 222 LFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR 276 (394)
T ss_pred HHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch
Confidence 9999999999999999999999999999999999999999999999999999 555
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-36 Score=271.59 Aligned_cols=320 Identities=20% Similarity=0.240 Sum_probs=272.8
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHH
Q 013144 92 FITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGV 171 (449)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 171 (449)
..++.|+.++..+.+++...++.+-.++.+.|.+.++.++|.+|+|++.+.+.+.+.++.++.|.++||.+.|+.+.+++
T Consensus 22 ~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gL 101 (448)
T COG2271 22 TYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGL 101 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHH
Confidence 34667788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHH--HHHH
Q 013144 172 ALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS--PILM 249 (449)
Q Consensus 172 ~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~--~~l~ 249 (449)
++.++.+++++++ ++.+.+.+.-++.|..+|.-+|.+...++.|++++|||+..++++++.++|..+.|++. +.+.
T Consensus 102 ilsai~nil~Gfs--~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~ 179 (448)
T COG2271 102 ILSAIVNILFGFS--PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFA 179 (448)
T ss_pred HHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999999999999999999999999999999999 8898
Q ss_pred hhhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCc-hhHHHhhccccHHH
Q 013144 250 SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVI-PPFRRLLSKMPTWS 328 (449)
Q Consensus 250 ~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 328 (449)
.+.+||..|++.++++++..++.++..+|+|++..-.+.+|-.....+... ++++.+..+.+ .-++.+++||.+|.
T Consensus 180 ~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~---~~~~~~~ls~~~i~~~YVL~Nk~iW~ 256 (448)
T COG2271 180 FHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYE---EEKENEGLTAWQIFVKYVLKNKLIWL 256 (448)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhh---hhccCCCccHHHHHHHHHHcChHHHH
Confidence 888999999999999999999999999999987654443332111100000 00111101111 23467889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHH
Q 013144 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIA 408 (449)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 408 (449)
+++..++.+..-+++..|.|.|+.|..|+|..++++..+.+=.++++|.+++|+++||+.+.+ |.....+.++.
T Consensus 257 la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr------R~p~~~i~~~~ 330 (448)
T COG2271 257 LALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGR------RGPMALIFMLL 330 (448)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc------cchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999985321 23444555566
Q ss_pred HHHHHHHhhcccch
Q 013144 409 PGIALIGLTAAKSP 422 (449)
Q Consensus 409 ~~~~~~~~~~~~~~ 422 (449)
..++++.+...++.
T Consensus 331 i~~~~~~~w~~~~~ 344 (448)
T COG2271 331 ITASLVLYWLAPNG 344 (448)
T ss_pred HHHHHHHHHcCCCc
Confidence 66666666655543
No 3
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-35 Score=280.41 Aligned_cols=317 Identities=34% Similarity=0.658 Sum_probs=289.9
Q ss_pred hhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhh
Q 013144 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (449)
Q Consensus 126 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 205 (449)
..+++.|..+.+++.+.+..|+.+++++.|++.||||.|+++..+.++.++++++..++...+++.+++.|++||++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 34688899999999999999999999999999999999999999999999999999988556777889999999999999
Q ss_pred hhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh-hCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 013144 206 ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP 284 (449)
Q Consensus 206 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (449)
.+|+...+.++|.|++||++..++..++..+|.+++.+++|++.+. +||+++|++.++.+++..++++++..|+|.+.+
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9999999999999999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhh
Q 013144 285 QISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASW 364 (449)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 364 (449)
...++|+++..+.+... ..++....|++++++++.+|.+.+..+..+++.+.+..+.|.|+++++|++..+.|+
T Consensus 225 ~is~~El~~I~~~k~~~------~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~ 298 (466)
T KOG2532|consen 225 NISEKELKYIEKGKSEA------HVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGF 298 (466)
T ss_pred CCCHHHHHHHHhccccc------ccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhH
Confidence 99999998887765432 111115679999999999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhcccc--hhHHHHHHHHHHHhhhhcccc
Q 013144 365 FSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS--PVMASAWLTLAIGMKSFSHSG 442 (449)
Q Consensus 365 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 442 (449)
+.+++.+...+..+++|.++||+.+|....+..||....++..+.+++++.+.+.+. .+..+.++.+..++.++..+|
T Consensus 299 ~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~G 378 (466)
T KOG2532|consen 299 LSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISG 378 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhh
Confidence 999999999999999999999998877777788899999999999999999888763 445777788888999999999
Q ss_pred cccccC
Q 013144 443 FLVNLQ 448 (449)
Q Consensus 443 ~~~~~~ 448 (449)
++.|.+
T Consensus 379 f~~~~~ 384 (466)
T KOG2532|consen 379 FYKNHQ 384 (466)
T ss_pred hHhhhh
Confidence 998875
No 4
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.7e-34 Score=277.11 Aligned_cols=293 Identities=20% Similarity=0.238 Sum_probs=243.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHH
Q 013144 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (449)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (449)
+.+|..+.++++.+++.+++....+.+.|.+.+|+|++..+.|++.+++.+++.+++++.|++.||+|||+++..++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 34678888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh----
Q 013144 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS---- 250 (449)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~---- 250 (449)
+++.++++++ +|++.+++.|+++|++.+...+....++.|++|+++|+++++++..+..+|.++++.+++++.+
T Consensus 84 ~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 161 (412)
T TIGR02332 84 GIASTATMFA--TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGL 161 (412)
T ss_pred HHHHHHHHHh--cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999 9999999999999999999999999999999999999999999999999999999999998874
Q ss_pred --hhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCc---cccCCCC--C-CCCCchhHHHhhc
Q 013144 251 --QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKP---LLMGNKH--K-PATVIPPFRRLLS 322 (449)
Q Consensus 251 --~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~-~~~~~~~~~~~~~ 322 (449)
..|||+.|++.++++++..++.++..||+|++.+...+++.+...+..... ....+.. + +......+++++
T Consensus 162 ~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 240 (412)
T TIGR02332 162 MALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF- 240 (412)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-
Confidence 369999999998888777777777778888765444443332222111100 0000000 0 001112344444
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 323 KMPTWSIIVANAMHSWGFFVILSWMPIYFNFV-YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
+|.+|...+..++.....+.+.+|+|.|+++. .|++..+++.......++.+++.++.|+++||+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r 309 (412)
T TIGR02332 241 TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER 309 (412)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc
Confidence 57888888888888888999999999999883 367888889999999999999999999999999876
No 5
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=3e-33 Score=273.60 Aligned_cols=296 Identities=26% Similarity=0.505 Sum_probs=252.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhh----------------------hcCCCchhhHHHHHHHHHHHHHh
Q 013144 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSL----------------------AHGWSRSFSGIVQSSFLWGYLVS 150 (449)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~~~~~~~~~g~~~s~~~~~~~~~ 150 (449)
..+.+|.+..+++++..+++.++...+.+.+.+.+ +++++..+.|++.+.+.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 35567888888999999999999999999988876 78999999999999999999999
Q ss_pred hccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHH
Q 013144 151 PIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIA 230 (449)
Q Consensus 151 ~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~ 230 (449)
+++.|+++||+|||+++.++.++.+++.+++.++...+++.+++.|+++|++.+...+....++.|++|+++|++++++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999999999988875542256888999999999999999999999999999999999999999
Q ss_pred HHhhhhhhHhHHHHHHHHHhh-hCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCC
Q 013144 231 MGGFTSGNAIGLVLSPILMSQ-AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHK 309 (449)
Q Consensus 231 ~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (449)
..+..+|.++++++++.+.+. .|||+.|++.++++++..++++...+|+|++.++.+++|.+...+... ++.+
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~------~~~~ 246 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQ------GQKG 246 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcc------cccC
Confidence 999999999999999999988 499999999999888877777777777776555444444443322111 1111
Q ss_pred CCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHH
Q 013144 310 PATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (449)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 389 (449)
+.....+++++++++.+|...+..++.....+.+.+|+|.|+++.+|++..+.++......++.+++.++.|+++||+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~ 326 (465)
T TIGR00894 247 STRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKS 326 (465)
T ss_pred CCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11123468899999999999999999999999999999999999899999999999999999999999999999999987
Q ss_pred hCCCc
Q 013144 390 RGTSV 394 (449)
Q Consensus 390 ~~~~~ 394 (449)
|+...
T Consensus 327 ~~~~~ 331 (465)
T TIGR00894 327 SKTLS 331 (465)
T ss_pred cCCCc
Confidence 75443
No 6
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.6e-33 Score=276.67 Aligned_cols=291 Identities=18% Similarity=0.148 Sum_probs=243.3
Q ss_pred hHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHH
Q 013144 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS 175 (449)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 175 (449)
++|..+..++++.++...|....+.++|.+.+++|.+..+.+|+.+.|.++..++.+++|+++||+|||++++++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhcc-CcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCc
Q 013144 176 LATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWF-PQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (449)
Q Consensus 176 i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 254 (449)
+++++++++ +|++.++++|+++|+|.+...+.....+.+++ |+++|+++++++.....+|..+||.+++.+.++.||
T Consensus 83 ~~~~~~~~a--~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gw 160 (495)
T PRK14995 83 LASLAAAFS--PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYW 160 (495)
T ss_pred HHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh
Confidence 999999999 99999999999999999998998888887776 679999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC-CCHHHHHH----------HHHhccCcc--------------------c
Q 013144 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQ-ISKYELEY----------ILREKQKPL--------------------L 303 (449)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----------~~~~~~~~~--------------------~ 303 (449)
||.|++...++++..++.++..|++++++.+ .+..+... ..+...... .
T Consensus 161 r~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 240 (495)
T PRK14995 161 GSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFI 240 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Confidence 9999998888777766666666765543221 22111000 000000000 0
Q ss_pred cCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHH
Q 013144 304 MGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLL 383 (449)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l 383 (449)
..+. +.+....++ +++|+|.++...+..++.....+....++|.|++..+|+++.++|+...+..++..++.++.|++
T Consensus 241 ~~e~-~~~~p~~~~-~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l 318 (495)
T PRK14995 241 RTQL-AASRPMIDM-RLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGIL 318 (495)
T ss_pred HHHh-cCCCCCcCH-HHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011 112222233 68899999888888888888888888999999999999999999999999999999999999999
Q ss_pred HHHHHHh
Q 013144 384 SDMLIQR 390 (449)
Q Consensus 384 ~dr~g~~ 390 (449)
.||+|+|
T Consensus 319 ~~r~g~~ 325 (495)
T PRK14995 319 VSRLGLR 325 (495)
T ss_pred HHHcCch
Confidence 9999987
No 7
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=3.9e-33 Score=266.58 Aligned_cols=267 Identities=15% Similarity=0.150 Sum_probs=226.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHH
Q 013144 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (449)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (449)
.++|..+..+.+..+..........+.+|.+.+++|.++.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++.
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 5 KVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 34555555555555555455556667789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCc
Q 013144 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (449)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 254 (449)
++++++++++ +|++.++++|+++|++.+...+...+++.|++|+++|++++++...+.++|..+||++++.+.+..||
T Consensus 85 ~~~~~~~~~~--~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw 162 (390)
T PRK03545 85 IASHVLSALA--WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGW 162 (390)
T ss_pred HHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcH
Confidence 9999999999 99999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHH
Q 013144 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (449)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (449)
|+.|++.++++++..+..+...|+.+++++ ....+.++.+|+|.++...+..+
T Consensus 163 ~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~ 215 (390)
T PRK03545 163 RTTFLAIGGGALITLLLLIKLLPLLPSEHS---------------------------GSLKSLPLLFRRPALVSLYLLTV 215 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCc---------------------------chHHHHHHHHhCcHHHHHHHHHH
Confidence 999999988877766655555554432110 01124557888998887766666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 335 MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
+.....+....+.+.|+++.+|.+..+++.......++.++++++.+++.||+++|
T Consensus 216 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~ 271 (390)
T PRK03545 216 VVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG 271 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh
Confidence 66666666678888888887899999999999999999999999999999999876
No 8
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1.6e-33 Score=275.15 Aligned_cols=292 Identities=16% Similarity=0.100 Sum_probs=238.2
Q ss_pred chhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHH
Q 013144 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (449)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 173 (449)
.+..+.++.++++.++..+.++..++++.|.+.+++|++..+.|++.+++.+++.+++++.|+++||+|||+++.+++++
T Consensus 24 ~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~ 103 (467)
T PRK09556 24 FKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLIL 103 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHH
Confidence 44467778888999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHhhh-----ccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHH
Q 013144 174 WSLATFLTPW-----AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (449)
Q Consensus 174 ~~i~~~~~~~-----~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l 248 (449)
.+++.++.++ + ++++.+++.|+++|++.+...+...++++||+|+++||+++|++..+.++|.++++++..++
T Consensus 104 ~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~ 181 (467)
T PRK09556 104 SAICMLGFGASLGSGS--VSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWG 181 (467)
T ss_pred HHHHHHHHHHHHhccc--chHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHH
Confidence 8777766554 5 89999999999999999999999999999999999999999999999999999999998877
Q ss_pred Hhhh---CchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhH-HHhhccc
Q 013144 249 MSQA---GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPF-RRLLSKM 324 (449)
Q Consensus 249 ~~~~---gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 324 (449)
.+.. +||..|.+.+++.++..++.++..++.|++.+..+.++.. .+..... ....+.++......+ +..+|+|
T Consensus 182 ~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ 258 (467)
T PRK09556 182 ANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIF--GEPISEE-DKETESTDMTKWQIFVEYVLKNP 258 (467)
T ss_pred HHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcc--cCccchh-hhccccccCcHHHHHHHHHHcCh
Confidence 6653 6999999888888777777777767766554333222210 0000000 000000011111112 3378999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.+|...+..++.....++...|.|.|+++.+|++..++++......++.+++.++.|+++||+++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r 324 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR 324 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 999999999888888888899999999988899999999999999999999999999999999988
No 9
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=1.4e-31 Score=261.39 Aligned_cols=305 Identities=18% Similarity=0.174 Sum_probs=233.3
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHH
Q 013144 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (449)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i 176 (449)
+++.+...+...+..........+..|.+.+++|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 34555566666777777777888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh------
Q 013144 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS------ 250 (449)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~------ 250 (449)
+.++++++ ++++.++++|++.|++.+.. .....+++|++|+++||+++++.....++|..+++.+.+.+..
T Consensus 114 ~~~~~~~~--~s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~ 190 (476)
T PLN00028 114 AVFCMSLV--SSATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG 190 (476)
T ss_pred HHHHHHHh--cCHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999998 99999999999999998864 4466789999999999999999988888888877766655432
Q ss_pred ---hhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHH
Q 013144 251 ---QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTW 327 (449)
Q Consensus 251 ---~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (449)
..|||+.|++.+++.++..++.++..++.|+.. .++.+ ++ .+.++.+....+++.++++++|
T Consensus 191 ~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~----~~~~~---~~--------~~~~~~~~~~~~~~~~~~~~~~ 255 (476)
T PLN00028 191 APSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGN----YRELK---KS--------GTMPKDSFSKVLRYGVTNYRTW 255 (476)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCc----hhhHH---hc--------CccccccHHHHHHHHHcCchhH
Confidence 248999999999888877766666655544321 01100 00 0001111123456778899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhH
Q 013144 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (449)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 407 (449)
.+.+..++.....+.+..++|.|+.+.+|++..+++.+..+..++.+++++++|+++||++||.... .|+.......+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~--~r~~~~~~~~~ 333 (476)
T PLN00028 256 ILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMR--GRLWALWIVQT 333 (476)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcc--hhHHHHHHHHH
Confidence 8888777766667777889999998888999999999999999999999999999999999874321 12333334444
Q ss_pred HHHHHHHHhhcccc
Q 013144 408 APGIALIGLTAAKS 421 (449)
Q Consensus 408 ~~~~~~~~~~~~~~ 421 (449)
+.++.++.+....+
T Consensus 334 l~~i~~~~~~~~~~ 347 (476)
T PLN00028 334 LGGVFCIWLGRANS 347 (476)
T ss_pred HHHHHHHHhcccch
Confidence 44444444444433
No 10
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=6.7e-32 Score=261.25 Aligned_cols=289 Identities=18% Similarity=0.162 Sum_probs=233.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHH
Q 013144 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (449)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (449)
+.++.......+..+..+++...++..+|.+.+++|++..+.|++.+.+.+++.+++++.|++.||+|||+++.++.++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~ 98 (434)
T PRK11663 19 YWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHH
Confidence 34556666777888888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCc
Q 013144 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (449)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 254 (449)
+++.++++++ ++++.+++.|++.|++.|...+...+++.|++|+++|++++++.+.+.++|..+++.+++.+.+.+||
T Consensus 99 ~~~~~~~~~~--~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw 176 (434)
T PRK11663 99 GIINILFGFS--SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGW 176 (434)
T ss_pred HHHHHHHHHH--hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccH
Confidence 9999999999 99999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhH-HHhhccccHHHHHHHH
Q 013144 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPF-RRLLSKMPTWSIIVAN 333 (449)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 333 (449)
|+.|++.+++.++..+...+..+|+|++....+.++.+...++.. .+.+.++.+....+ +..+++|.+|.+.+..
T Consensus 177 ~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (434)
T PRK11663 177 RYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELA----QQQEGAGLSRKEILTKYVLLNPYIWLLSFSY 252 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccc----hhccccCCChhhhHHHHHhcChHHHHHHHHH
Confidence 999999888776665555555566554321111000000000000 00000001111112 2367788899888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHH
Q 013144 334 AMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (449)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 389 (449)
++.......+..|+|.|+++.+|++..+++.......++.++++++.|+++||+.+
T Consensus 253 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~ 308 (434)
T PRK11663 253 VLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFN 308 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhcc
Confidence 87777888888999999987789999999999999999999999999999999943
No 11
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=6e-32 Score=254.22 Aligned_cols=252 Identities=13% Similarity=0.066 Sum_probs=204.5
Q ss_pred HHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhH
Q 013144 110 LCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSL 189 (449)
Q Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~ 189 (449)
.+...+..+++.+|.+++|+|+++.+.|++.+.+.+++.+++++.|+++||+|||+++..+......+.+..... +++
T Consensus 2 ~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~--~~~ 79 (368)
T TIGR00903 2 ASQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDP--FNY 79 (368)
T ss_pred hhhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHh--ccH
Confidence 345667788999999999999999999999999999999999999999999999998776665555544433444 689
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHH
Q 013144 190 LALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWV 269 (449)
Q Consensus 190 ~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 269 (449)
+.++++|+++|++.+. .+.....++|++|+++|++++++...+..+|..+++++++.+.+.+|||+.|++.++++++..
T Consensus 80 ~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 80 EWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGI 158 (368)
T ss_pred HHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 9999999999999986 556666779999999999999999999999999999999999999999999999888888877
Q ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 013144 270 LVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPI 349 (449)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (449)
+++++..||+|+++++..+. ++...++++++|+|.+|.+.+..++.....+.+.+|+|.
T Consensus 159 ~~~~~~lp~~p~~~~~~~~~---------------------~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~ 217 (368)
T TIGR00903 159 ILVLAALPALPFQAAEGFGF---------------------KDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEA 217 (368)
T ss_pred HHHHHHcCCCCCCCCCCcch---------------------HHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777788876543210000 000125678999999999999999999999999999999
Q ss_pred HHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 350 YFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 350 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
|+++ .|++.. .+.......+.+.+ ..++++||..||
T Consensus 218 ~L~~-~g~s~~-~~~~~~l~~~~g~~---g~~~~~d~~~r~ 253 (368)
T TIGR00903 218 ALRP-AGLEDI-AGDAVALAILAGLI---GVAVIPDRVARA 253 (368)
T ss_pred HHHH-CCCChH-HHHHHHHHHHHHHH---HHHHhhHHhhhh
Confidence 9987 588764 55555555444444 457888888665
No 12
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=2.7e-31 Score=253.43 Aligned_cols=264 Identities=17% Similarity=0.180 Sum_probs=219.1
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHH
Q 013144 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (449)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i 176 (449)
.|..+..+.+..+............+|++.+++|.++.+.++..+++.++..+++++.|++.||+|||+++..+.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~ 97 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL 97 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH
Confidence 56665666666555555666666778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchH
Q 013144 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (449)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~ 256 (449)
+.++++++ ++++.+++.|+++|++.+...+...+++.|++|+++|++++++...+.++|..+||++++.+.+.+|||+
T Consensus 98 ~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~ 175 (394)
T PRK10213 98 SCLLVSFA--NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRN 175 (394)
T ss_pred HHHHHHHH--ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHH
Confidence 99999998 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHH
Q 013144 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (449)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (449)
.|++.++++++..+......||++++++ ....+.++.+|+|.++...+..++.
T Consensus 176 ~f~~~~~l~~~~~l~~~~~~p~~~~~~~---------------------------~~~~~~~~~l~~~~~~~~~~~~~~~ 228 (394)
T PRK10213 176 VFNAAAVMGVLCIFWIIKSLPSLPGEPS---------------------------HQKQNTFRLLQRPGVMAGMIAIFMS 228 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCcccc---------------------------cchhHHHHHhcCHHHHHHHHHHHHH
Confidence 9999887776655444444454332110 0011345778899888877766666
Q ss_pred HHHHHHHHHHH-HHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 337 SWGFFVILSWM-PIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 337 ~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
....+....++ |.|.+ .+|+++.+.+......+++.+++.++.+++.||.+++
T Consensus 229 ~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~ 282 (394)
T PRK10213 229 FAGQFAFFTYIRPVYMN-LAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL 282 (394)
T ss_pred HHHHHHHHHHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 66666666676 55554 5799999999999999999999999999999985433
No 13
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.8e-31 Score=255.85 Aligned_cols=280 Identities=27% Similarity=0.456 Sum_probs=237.8
Q ss_pred HHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccch
Q 013144 108 LALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADT 187 (449)
Q Consensus 108 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~ 187 (449)
++..+++...++...|.+.+++|.++.+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.++++++ +
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~--~ 80 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA--G 80 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH--c
Confidence 34567788888999999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred hHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHH
Q 013144 188 SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (449)
Q Consensus 188 ~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~ 267 (449)
+++.++++|+++|++.+...+....++.|++|+++|++++++......+|..+++.+++.+.+..+||+.|++.+++.++
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGII 160 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888877
Q ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHH
Q 013144 268 WVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWM 347 (449)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (449)
..+..++..++++++++..++++.+...+..... ..++++++.....+++.+++|+++...+..++..........+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (399)
T TIGR00893 161 WGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAE--QQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWF 238 (399)
T ss_pred HHHHhhheecCCCCccccCCHHHHhhcchhhccc--cccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 7776666666666544333333222111110000 01111222334467788999999999999999899999999999
Q ss_pred HHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhC
Q 013144 348 PIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRG 391 (449)
Q Consensus 348 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 391 (449)
|.|+++.+|.++.++++......++.+++.++.|++.||++||+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 239 PTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999888999999999999999999999999999999999984
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.8e-31 Score=258.14 Aligned_cols=269 Identities=14% Similarity=0.096 Sum_probs=211.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcC---CCchhhHHHHH---HHHHHHHHhhccchhhhhhcCCchHHH
Q 013144 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHG---WSRSFSGIVQS---SFLWGYLVSPIAGGTLVDYYGGKIIMA 168 (449)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~g~~~s---~~~~~~~~~~~~~G~l~dr~Grr~~l~ 168 (449)
++++..+...+++.+++++|...++...|.+.++++ .+..+.+...+ +..++..++++++|+++||+|||+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~ 97 (432)
T PRK10406 18 RRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 345566777788899999999999999999999984 45554444444 444555599999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccchhHH--------HHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHh
Q 013144 169 WGVALWSLATFLTPWAADTSLL--------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAI 240 (449)
Q Consensus 169 ~~~~~~~i~~~~~~~~~~~~~~--------~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~ 240 (449)
++++++++++++++++ +++. .++++|+++|++.|..++...++++|++|+++|+++.++...+...|.++
T Consensus 98 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~ 175 (432)
T PRK10406 98 ISVCMMCFGSLVIACL--PGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL 175 (432)
T ss_pred HHHHHHHHHHHHHhhc--CCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHH
Confidence 9999999999999998 7653 68999999999999999999999999999999999999999888889888
Q ss_pred HHHHHHHHH--------hhhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCC
Q 013144 241 GLVLSPILM--------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPAT 312 (449)
Q Consensus 241 g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (449)
++.+...+. +.+|||++|++.++++++... .....||+++. +.+ +. +
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~~-------~~~-------------~~-~--- 230 (432)
T PRK10406 176 ALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQQ-------ETR-------------AL-K--- 230 (432)
T ss_pred HHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCchH-------HHh-------------hh-c---
Confidence 887765554 257999999987777665432 22223333221 000 00 0
Q ss_pred CchhHHHhhccccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 313 VIPPFRRLLSKMPTWSIIVANAM-HSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
...++++++|+++.+...+...+ ....++.+..|+|.|+++.+|++..+++.......++..++.++.|+++||++||
T Consensus 231 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr 309 (432)
T PRK10406 231 EAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR 309 (432)
T ss_pred ccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 01256788888888776665444 3667788889999999887899988888888888888888899999999999988
No 15
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=5.5e-31 Score=263.55 Aligned_cols=257 Identities=14% Similarity=0.156 Sum_probs=200.6
Q ss_pred chhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHH
Q 013144 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (449)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 173 (449)
.+++|.++++++++.+..+++...++.++|.+.++++++..+.+++.+++.++.+++++++|+++||+|||+++++++++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 46678888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh-
Q 013144 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA- 252 (449)
Q Consensus 174 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~- 252 (449)
.+++.++++++ ++++.++++|++.|++.|+..+...+++.|++|+++|++.++++.+++.+|.++++.++..+...+
T Consensus 242 ~~i~~ll~afa--~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 242 NGFFAFFSSFV--QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred HHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999 999999999999999999999999999999999999999999999999999999999887776543
Q ss_pred ------------CchHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CCCHHHHHHHHHhccCccc----------------
Q 013144 253 ------------GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP-QISKYELEYILREKQKPLL---------------- 303 (449)
Q Consensus 253 ------------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------------- 303 (449)
+||+.+++.++.+++.+ +..+..||+|+... +.+.++.....++......
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~l-l~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~ 398 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFAI-GALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIK 398 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHH
Confidence 58998888777665544 44566788876421 1112222221111110000
Q ss_pred ----cC---C-CCCCC---------------CCchhHHHhhccc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013144 304 ----MG---N-KHKPA---------------TVIPPFRRLLSKM---PTWSIIVANAMHSWGFFVILSWMPIYFNF 353 (449)
Q Consensus 304 ----~~---~-~~~~~---------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (449)
.. + +.+.. ..+.+++++++.+ +++.+++.+++..++++++..|+|.++.+
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~ 474 (742)
T TIGR01299 399 TIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKH 474 (742)
T ss_pred HhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 00000 0112355555443 45677778888899999999999988654
No 16
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=2.1e-31 Score=262.42 Aligned_cols=306 Identities=19% Similarity=0.175 Sum_probs=247.0
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHH
Q 013144 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (449)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~ 179 (449)
.+..++++.++..++....++.+|.+.+++|.+..+.+|+.+.+.++..++.++.|+++||+|||++++++.++..++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45677788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHH
Q 013144 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (449)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~ 259 (449)
+++++ ++++.++++|+++|++.+...+...+++.|++|+++|+++++++..+..+|..+||.+++.+.++.|||+.|+
T Consensus 83 ~~~~~--~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 83 LCGVA--PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHhCc--CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 99999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCC-CCHHHHH----------HHHHhccCccccC--------------------CCC
Q 013144 260 IFGLSGFLWVLVWLSATSSTPDRHPQ-ISKYELE----------YILREKQKPLLMG--------------------NKH 308 (449)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~~~~~~--------------------~~~ 308 (449)
+.+.++++..++.++..|+++++.++ .+..... ....+........ .+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWEL 240 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 98888777666666666654332221 1111100 0000000000000 000
Q ss_pred CCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHH
Q 013144 309 KPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI 388 (449)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 388 (449)
.++....+ .+++++|.++...+..++.....+....++|.|+++.+|+++.++++...+..++.+++.++.|++.||++
T Consensus 241 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~ 319 (485)
T TIGR00711 241 TDDNPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKID 319 (485)
T ss_pred cCCCCccC-HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 11111122 26788999998888888888888888999999999989999999999999999999999999999999999
Q ss_pred HhCCCchhhHHHHHHHHhHHHHHHHHHhh
Q 013144 389 QRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (449)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (449)
+| ..+..+....+++...+.
T Consensus 320 ~~---------~~~~~g~~~~~~~~~~~~ 339 (485)
T TIGR00711 320 PR---------KLVTIGLILYAVGFYWRA 339 (485)
T ss_pred cH---------HHHHHHHHHHHHHHHHHh
Confidence 88 344455555555554443
No 17
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=7.1e-31 Score=252.65 Aligned_cols=273 Identities=22% Similarity=0.238 Sum_probs=227.3
Q ss_pred chhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHH
Q 013144 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (449)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 173 (449)
.+++|..+.+.++..+..+++....++..|.+.+++|.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 34778888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC
Q 013144 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (449)
Q Consensus 174 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 253 (449)
..++.++++++ ++++.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..+
T Consensus 90 ~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 167 (406)
T PRK11551 90 FGLFSLATAQA--WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA 167 (406)
T ss_pred HHHHHHHHHHh--ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 99999999988 9999999999999999999999999999999999999999999999999999999999998888889
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhc---cccHHHHH
Q 013144 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLS---KMPTWSII 330 (449)
Q Consensus 254 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 330 (449)
||+.|++.+++.++..++..+..||+|+..++..+++ +++ ...+..++ .+..+...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------------~~~---~~~~~~~~~~~~~~~~~~~ 226 (406)
T PRK11551 168 WRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGK------------------QRA---PVLRALFGEGRATATLLLW 226 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcch------------------hhh---hhHHHHhhhhhhhHHHHHH
Confidence 9999999887766665555555666553211100000 000 01111222 22334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 331 VANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
+..++.....+....+.|.|+++ .|+++.+.+.......++.+++.++.|++.||+++|
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 285 (406)
T PRK11551 227 ISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPR 285 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 45555556667778889999988 699999999999999999999999999999999987
No 18
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-31 Score=238.62 Aligned_cols=271 Identities=17% Similarity=0.207 Sum_probs=243.4
Q ss_pred chhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHH
Q 013144 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (449)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 173 (449)
++.+++.+.+..+...+.++.+..++++.+.+.+++|+|+.|.+++.++..+...+..++.|.+.||||.|++..+++++
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 44556778888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcc-chhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh
Q 013144 174 WSLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (449)
Q Consensus 174 ~~i~~~~~~~~~-~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 252 (449)
..+.++..+++. .++++++++.+.+.|++.| .+.....++++|+|++++|.++|+.. ..|+|..+...++..+....
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 999999988872 2456799999999999855 58889999999999999999999999 99999999999999999998
Q ss_pred C---chHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCc-hhHHHhhccccHHH
Q 013144 253 G---IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVI-PPFRRLLSKMPTWS 328 (449)
Q Consensus 253 g---wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 328 (449)
| |+....+..+..++..+..++...|.|+.+...+ +.. .+++.+++++++|.
T Consensus 167 g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~------------------------~~~~~~~~~v~~~~~~W~ 222 (417)
T COG2223 167 GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVK------------------------PQLPAQLKAVFSNKDTWL 222 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhcccc------------------------ccchhHHHHHhcCcchHH
Confidence 9 9999999988888888888888888776422111 111 46778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
+++.++..+.++.++..++|.|+++++|.++.++|.......+.+.+.++++|+++||+|.+
T Consensus 223 lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~ 284 (417)
T COG2223 223 LSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGR 284 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccch
Confidence 99999999999999999999999999999999999999999999999999999999999988
No 19
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=1.2e-30 Score=249.22 Aligned_cols=265 Identities=18% Similarity=0.238 Sum_probs=228.1
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHh
Q 013144 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (449)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~ 181 (449)
..+....+..........+..|.+.+++|.++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 87 (385)
T TIGR00710 8 LLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL 87 (385)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 33444445566777788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHH
Q 013144 182 PWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIF 261 (449)
Q Consensus 182 ~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~ 261 (449)
+++ ++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..|||+.|++.
T Consensus 88 ~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~ 165 (385)
T TIGR00710 88 ALS--NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFL 165 (385)
T ss_pred HHH--ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 998 999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHH
Q 013144 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (449)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (449)
++..++..+..++..||+++++++.+. +.....+++.+++|+++...+...+.....+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (385)
T TIGR00710 166 SLAGILLSALIFFILPETLPYEARIQI----------------------STYFETFLLLLKSKMFWGYALIYGASFGGFF 223 (385)
T ss_pred HHHHHHHHHHHHHhCCCCCCCcccCCH----------------------HHHHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 887777666666655554432211100 0112345678889999888877777777777
Q ss_pred HHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
....+.|.++++.+|+++.+++.+.....++.+++.++.+++.||+++|
T Consensus 224 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 272 (385)
T TIGR00710 224 AFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK 272 (385)
T ss_pred HHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 8888899999888899999999999999999999999999999999988
No 20
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=1.9e-30 Score=245.52 Aligned_cols=267 Identities=12% Similarity=0.110 Sum_probs=218.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhh-hcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHH
Q 013144 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGV 171 (449)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 171 (449)
.++-.++.+.+..+..++.+..+..++++.+.+.+ ++|+|.+|.+++.+++.+++.+..++.|++.||+|.|+++.++.
T Consensus 28 ~~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ 107 (462)
T PRK15034 28 GKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFST 107 (462)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 34445678888899999999999999999999877 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhc---cchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHH
Q 013144 172 ALWSLATFLTPWA---ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (449)
Q Consensus 172 ~~~~i~~~~~~~~---~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l 248 (449)
++.++.+++.+++ ..++++.+++.|++.|++ |..++.....+++|+|+++||+++|+.....++|..++++++..+
T Consensus 108 ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~ 186 (462)
T PRK15034 108 AILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLV 186 (462)
T ss_pred HHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 9999999988864 126899999999999998 668899999999999999999999999877778887776666553
Q ss_pred H-----h-------------hhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCC
Q 013144 249 M-----S-------------QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKP 310 (449)
Q Consensus 249 ~-----~-------------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (449)
. . ..+||..+++..++.++..++.++..++.++.
T Consensus 187 i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~---------------------------- 238 (462)
T PRK15034 187 IFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS---------------------------- 238 (462)
T ss_pred HHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc----------------------------
Confidence 3 2 23477777787777777776666665544321
Q ss_pred CCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 311 ATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
+....+.++.+|+|++|.+++.+++.+..+.++..++|.|+++.+ +............+...+.++++|+++||+|++
T Consensus 239 ~~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~ 316 (462)
T PRK15034 239 RASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGV 316 (462)
T ss_pred ccCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch
Confidence 111235568999999999999999999999999999999998854 333333333445577888899999999999988
No 21
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=1e-30 Score=248.99 Aligned_cols=261 Identities=18% Similarity=0.184 Sum_probs=221.8
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHH
Q 013144 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (449)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~ 180 (449)
+..+.+..+..........+.+|.+++++|.+..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l 84 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAM 84 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 44556677777777788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHH
Q 013144 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI 260 (449)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~ 260 (449)
++++ ++++.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|..+++++++.+.+..|||+.|++
T Consensus 85 ~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~ 162 (382)
T PRK10091 85 FTLS--SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLL 162 (382)
T ss_pred HHHh--CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHH
Confidence 9999 99999999999999999998899999999999999999999999999999999999999999998999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHH
Q 013144 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (449)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (449)
.+++.++..+..++..||.+++.+. + .... .+.+|++..|...+..++.....
T Consensus 163 ~~~~~~~~~~~~~~~lp~~~~~~~~-~-------------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 215 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDIRDEAKG-G-------------------------LREQ-FHFLRSPAPWLIFAATMFGNAGV 215 (382)
T ss_pred HHHHHHHHHHHHHHhCCCCCccccc-C-------------------------HHHH-HHHhcChHHHHHHHHHHHHHHHH
Confidence 8887776666555555654321110 0 0011 24567777777666655555555
Q ss_pred HHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
+....+++.++.+.+|+++.+.+++.....++.++++++.+++.||+++|
T Consensus 216 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~ 265 (382)
T PRK10091 216 FAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPL 265 (382)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCch
Confidence 56667778888877899999999999999999999999999999999887
No 22
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=1.9e-30 Score=246.17 Aligned_cols=275 Identities=18% Similarity=0.208 Sum_probs=219.8
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhh-hhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHH
Q 013144 102 SMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (449)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~ 180 (449)
...++..+..+.......+..|. +++++|+++.+.+++.+++.++..+++++.|+++||+|||+.++++.++.+++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~ 83 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLW 83 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 34666777778888889999995 99999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccch-hHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh--------
Q 013144 181 TPWAADT-SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-------- 251 (449)
Q Consensus 181 ~~~~~~~-~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~-------- 251 (449)
++++ + +++.+++.|+++|++.+. .+...+++.|++|+++|++++++.....++|..+++.+++.+...
T Consensus 84 ~~~~--~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 160 (366)
T TIGR00886 84 AGLA--VQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLP 160 (366)
T ss_pred HHHH--hhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9998 8 999999999999999664 566789999999999999999999988888888888888776653
Q ss_pred --hCchHHHH-HHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHH
Q 013144 252 --AGIFGPFV-IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWS 328 (449)
Q Consensus 252 --~gwr~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (449)
.+||+.|+ ..+++..+..++.+...++.|+++++.++.+. .. .....++......++.+++|+++.
T Consensus 161 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 229 (366)
T TIGR00886 161 AHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSF------KG-----ARWSVGTGALGDQLKVFRDRHTWI 229 (366)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhccc------cc-----ccccccchhHHHHHHHHhccchhh
Confidence 38999994 44555554444445555554432211100000 00 000001111124567888999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
..+..++.....+....+.|.|+++.+|+++.+++.+.....++.++++++.|++.||+++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~ 291 (366)
T TIGR00886 230 LALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA 291 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc
Confidence 88888877777888889999999998899999999998899999999999999999999987
No 23
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=1.6e-30 Score=250.12 Aligned_cols=293 Identities=15% Similarity=0.144 Sum_probs=223.1
Q ss_pred chhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHH
Q 013144 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (449)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 173 (449)
++++|+.+..++++++...++....++..|.+.+++|+++.+.+++.+.+.++..+++++.|+++||+|||++++++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~ 86 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL 86 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 45678888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC
Q 013144 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (449)
Q Consensus 174 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 253 (449)
.+++.++++++ ++++.+++.|++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+..+
T Consensus 87 ~~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 164 (405)
T TIGR00891 87 FSAGTLACGFA--PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHHHh--ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999998 9999999999999999999999999999999999999999999999999999999999999988766
Q ss_pred --chHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCH-HHHHHHHHhccCccccCCCCCCCCCchhHHHhhccc--cHHH
Q 013144 254 --IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISK-YELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKM--PTWS 328 (449)
Q Consensus 254 --wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 328 (449)
||+.|++.++..++..+ .....||+++..+..++ ++.....++..... ...+...+......++..+.+ .+..
T Consensus 165 ~~w~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (405)
T TIGR00891 165 DGWRALFFISILPIIFALW-LRKNIPEAEDWKEKHAGKALVRTMVDILYGGE-HRIANIVMTLAAAMVQSAGKRWPTFVY 242 (405)
T ss_pred ccHHHHHHHHHHHHHHHHH-HHHhCCCChhHHHHhhhhhhhhhHHHHHhccc-hhhhhhhhhhhHHhhhhhhhhhHHHHH
Confidence 99999886655544433 33344554322111100 00000000000000 000000000011111111111 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
..+...+..........++|.|+.+.+|++..+.+.+.....++.+++.++.+++.||++||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~ 304 (405)
T TIGR00891 243 LVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRR 304 (405)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch
Confidence 33333444445556677899999888899999999999999999999999999999999988
No 24
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=1.6e-30 Score=249.91 Aligned_cols=274 Identities=13% Similarity=0.083 Sum_probs=233.2
Q ss_pred chhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHH
Q 013144 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (449)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 173 (449)
+++.+.....+.+..+...+....+.+.+|.+.+++|.++.+.++..+.+.+++.+++++.|+++||+|||++++++..+
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 45667777888888888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC
Q 013144 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (449)
Q Consensus 174 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 253 (449)
.+++.++++++ ++++.+++.|+++|++.+...+...+++.|++|+++|++.+++......+|..+||.+++.+.+..+
T Consensus 88 ~~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~ 165 (406)
T PRK15402 88 FILTCLAILLA--QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP 165 (406)
T ss_pred HHHHHHHHHHH--ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 99999999888 9999999999999999998889999999999999999999999998889999999999999999899
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHH
Q 013144 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVAN 333 (449)
Q Consensus 254 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (449)
||+.|++.++..++..+..++..||++++.++.. +.++...+++.++++|.++...+..
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETAGRVGEKL---------------------SLKELGRDYKLVLKNRRFVAGALAL 224 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCccccccc---------------------cHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 9999999888877766655555555433211100 0011223566888999998888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 334 AMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
++..........+.|.++.+.+|+++.+.+.......++.+++.++.+++.||+++|
T Consensus 225 ~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~ 281 (406)
T PRK15402 225 GLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLR 281 (406)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 777666667777889998888899999888887777788899999999999999887
No 25
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=2.7e-30 Score=246.72 Aligned_cols=262 Identities=13% Similarity=0.193 Sum_probs=216.3
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHH
Q 013144 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (449)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i 176 (449)
.|.....++.+.+..... ...++++|.+++|+|+|..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~ 86 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAV 86 (393)
T ss_pred HHHHHHHHHHHHHcchhh-hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHH
Confidence 344444444444443332 6778999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh-Cch
Q 013144 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-GIF 255 (449)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr 255 (449)
+.++++++ ++++.++++|+++|++.+...+....++.|++| ++|+++++++..+..+|..+|+.+++.+.++. +||
T Consensus 87 ~~~~~~~a--~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~ 163 (393)
T PRK09705 87 GALMRELY--PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWY 163 (393)
T ss_pred HHHHHHHC--cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 99999999 999999999999999999999999999999997 88999999999999999999999999998875 899
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHH
Q 013144 256 GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAM 335 (449)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (449)
+.+.+.++..++..+..++..++.|++++ + ++. ..++.+++++.|...+..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~--~~~----~~~~~l~~~~~~~l~~~~~~ 216 (393)
T PRK09705 164 QTLAWWALPAVVALFAWWWQSAREVASSH---------------------K--TTT----TPVRVVFTPRAWTLGVYFGL 216 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccc---------------------C--CCc----CCcccccCHhHHHHHHHHHH
Confidence 99877666655444333333222221100 0 000 11245567888887777777
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 336 HSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
....++....+.|.|+++ +|++..+++.......++.++++++.+++.||+++|
T Consensus 217 ~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~ 270 (393)
T PRK09705 217 INGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR 270 (393)
T ss_pred HHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Confidence 778888899999999988 699999999999999999999999999999999987
No 26
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=3e-30 Score=246.81 Aligned_cols=267 Identities=15% Similarity=0.180 Sum_probs=222.5
Q ss_pred hHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHH
Q 013144 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS 175 (449)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 175 (449)
++++.....++..+.........++.+|++.+++|+|+.+.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35566777788888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh-hhCc
Q 013144 176 LATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QAGI 254 (449)
Q Consensus 176 i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~-~~gw 254 (449)
++.++++++ ++++.+++.|+++|++.|...+...+++.|++|+++|+++++.......+|..++|.+.+.+.. ..||
T Consensus 84 i~~~l~~~~--~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw 161 (394)
T PRK03699 84 LAVAGLMFS--HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEW 161 (394)
T ss_pred HHHHHHHHc--chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH
Confidence 999999998 9999999999999999999899999999999999999999999999999999999999888764 5799
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHH
Q 013144 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (449)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (449)
|+.|++.+++.++..++.++. +.|+..++.++ + +++. .+. ..++.++...+..+
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~~--~~p~~~~~~~~-----------------~--~~~~----~~~-~~~~~~~~~~~~~~ 215 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTLFS--EFPALGKHAPK-----------------A--DKPV----AKE-KWGIGVLFLAIAAL 215 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCccccccCcc-----------------c--cCcc----ccc-cCChHHHHHHHHHH
Confidence 999999888776655544332 22221110000 0 0000 001 12456677777777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 335 MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
+.....+.+..|+|.|+++.+|+++.+++.+.+...++..+++++.++++||+++|
T Consensus 216 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 271 (394)
T PRK03699 216 LYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQ 271 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchh
Confidence 77777788889999999888899999999999999999999999999999999988
No 27
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=2e-30 Score=246.94 Aligned_cols=260 Identities=18% Similarity=0.207 Sum_probs=214.9
Q ss_pred HHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccc
Q 013144 107 ALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAAD 186 (449)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~ 186 (449)
...........+++..|.+.+++|+++.+.|++.+++.++..+++++.|+++||+|||+++.++.++.+++.++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~-- 88 (377)
T TIGR00890 11 IMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIA-- 88 (377)
T ss_pred HHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHH--
Confidence 333344446678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHH
Q 013144 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGF 266 (449)
Q Consensus 187 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~ 266 (449)
++++.++++|++.|++.+...+.....+.|++| ++|+++.++...+.++|..+++++.+.+.+..|||+.|++.+++.+
T Consensus 89 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 167 (377)
T TIGR00890 89 DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFL 167 (377)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 999999999999999999888888899999996 6899999999999999998887777777788899999999998887
Q ss_pred HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHH
Q 013144 267 LWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSW 346 (449)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (449)
+..+..++..++++++..+.+ .+.+......++.+++|.++...+..++..........+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (377)
T TIGR00890 168 LVIVLGAFLIGYPPGQLIKTN--------------------IEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGL 227 (377)
T ss_pred HHHHHHHHheecCchhccccC--------------------cccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHH
Confidence 777666666554433211100 000011124567888999888777777666666666677
Q ss_pred HHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 347 MPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 347 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.+.|.++ +|.+..+.+.......++.++++++.|++.||++||
T Consensus 228 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 270 (377)
T TIGR00890 228 YKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQ 270 (377)
T ss_pred HHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 7777766 688888889999999999999999999999999988
No 28
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=2.5e-30 Score=253.91 Aligned_cols=278 Identities=19% Similarity=0.176 Sum_probs=209.2
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchh-hHH-----HHHHHHHHHHHhhccchhhhhhcCCchHHHHHH
Q 013144 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSF-SGI-----VQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGV 171 (449)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~-----~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 171 (449)
+..+....++.+++++|...++...|.+.++++.+..+ .++ +.++..++..++++++|+++||+|||+++.+++
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 34566778899999999999999999999998644322 222 247788999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccchhHHH--------HHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHH
Q 013144 172 ALWSLATFLTPWAADTSLLA--------LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLV 243 (449)
Q Consensus 172 ~~~~i~~~~~~~~~~~~~~~--------l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~ 243 (449)
+++++++++++++ +|++. ++++|+++|++.|..++...+++.|++|+++||++.++...+..+|..+|+.
T Consensus 95 ~l~~i~~~~~a~~--~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~ 172 (490)
T PRK10642 95 VIMSISTFCIGLI--PSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAG 172 (490)
T ss_pred HHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 88864 8999999999999999999999999999999999999999988889888887
Q ss_pred HHHHHHh--------hhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCch
Q 013144 244 LSPILMS--------QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIP 315 (449)
Q Consensus 244 l~~~l~~--------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (449)
+...+.. .+|||+.|++.++++++. ++.....||+|+..+. .++..+...+ . ..+....
T Consensus 173 ~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~~~~~~~~esp~~~~~-----~~~~~~~~~~-----~--~~~~~~~ 239 (490)
T PRK10642 173 VVVLISTIVGEANFLDWGWRIPFFIALPLGIIG-LYLRHALEETPAFQQH-----VDKLEQGDRE-----G--LQDGPKV 239 (490)
T ss_pred HHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-HHHHHcCCCChhHHHH-----HHhhhhhccc-----c--ccccccC
Confidence 7655432 579999999977655543 3334445665542110 0000000000 0 0001122
Q ss_pred hHHHhhcc-ccHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 316 PFRRLLSK-MPTWS-IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 316 ~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
++++++++ ++.+. .....++....++.+..|+|.|+++.+|++..+.++......++.+++.++.|+++||+|||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr 316 (490)
T PRK10642 240 SFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR 316 (490)
T ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 45566653 22222 22333445667788889999999887899888888777778888899999999999999998
No 29
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.98 E-value=8.7e-32 Score=244.31 Aligned_cols=282 Identities=19% Similarity=0.238 Sum_probs=240.1
Q ss_pred chhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHH
Q 013144 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (449)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 173 (449)
.+..+..+.++++..+++.+|.+.+....+.+++.+|++++..|++.+.+.+.+++++|+.|+++|||.||+++.+|..+
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~i 107 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFI 107 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHH
Confidence 34456788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC
Q 013144 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (449)
Q Consensus 174 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 253 (449)
+.++.++++++ ..||+++++|.+.|+|.+...|+++++++|.+|..+|++++++++.+.++|..+|.+.+..+.+..+
T Consensus 108 W~~Av~~~~fs--~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~ 185 (493)
T KOG1330|consen 108 WTLAVFASGFS--NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF 185 (493)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999988766
Q ss_pred -chHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHH
Q 013144 254 -IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVA 332 (449)
Q Consensus 254 -wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (449)
|||.|+..++++++..++.+++.+|++++.+...+.+. .......+.+.+.+.+.+++.+....+.
T Consensus 186 ~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~-------------~~~~~~ts~~kDl~~l~~~~v~v~~sl~ 252 (493)
T KOG1330|consen 186 WWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGEN-------------KMVKPFTSVWKDLKVLAKIKVFVLSSLG 252 (493)
T ss_pred ceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCC-------------cCCCCccchHHHHHHHHccCceeeehHH
Confidence 99999999999999999888888777654221111100 0112233455677778888887777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh---hCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 333 NAMHSWGFFVILSWMPIYFNFV---YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~---~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.....+...++..|.|.++... .|++..+..++..+...++.+|.+++|.++||+.++
T Consensus 253 ~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~ 313 (493)
T KOG1330|consen 253 IIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRI 313 (493)
T ss_pred HHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHh
Confidence 7777777767777777666543 356666666777888888999999999999998764
No 30
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.98 E-value=1.3e-29 Score=246.48 Aligned_cols=291 Identities=18% Similarity=0.228 Sum_probs=225.0
Q ss_pred chhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHH
Q 013144 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (449)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 173 (449)
++++|.++...++.....+.+...++...|.+.++ |++..+.+++.+.+.++..+++++.|+++||+|||++++++.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~ 102 (452)
T PRK11273 24 RRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 102 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHH
Confidence 44566666666677777777777788888999888 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcc--chhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhH-hHHHHHHHHHh
Q 013144 174 WSLATFLTPWAA--DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNA-IGLVLSPILMS 250 (449)
Q Consensus 174 ~~i~~~~~~~~~--~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~-~g~~l~~~l~~ 250 (449)
.+++.+++++.+ ..+++.+++.|++.|++.|...+.....+.|++|+++|+++++++..+.++|.. .+++++..+..
T Consensus 103 ~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 182 (452)
T PRK11273 103 AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW 182 (452)
T ss_pred HHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 999998887751 137888999999999999998888888999999999999999999999999864 45555444444
Q ss_pred hhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhH-HHhhccccHHHH
Q 013144 251 QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPF-RRLLSKMPTWSI 329 (449)
Q Consensus 251 ~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 329 (449)
..|||+.|++.+++.++..++.++..||+|++....++++.+. +... . ....+.++.+....+ +.++|++.+|..
T Consensus 183 ~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (452)
T PRK11273 183 FNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKN--DYPD-D-YNEKHEQELTAKQIFMQYVLPNKLLWYI 258 (452)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhh--cccc-c-cccccCCCccHHHHHHHHHHcChHHHHH
Confidence 4599999999888877766666666677665432222111110 0000 0 000000111111112 346788999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHH
Q 013144 330 IVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (449)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 389 (449)
.+..++.....+....++|.|+++..|++..+++.......++.+++.++.|+++||+++
T Consensus 259 ~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~ 318 (452)
T PRK11273 259 AIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFR 318 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 888888888888889999999999889998899988888889999999999999999954
No 31
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.98 E-value=6.4e-30 Score=247.60 Aligned_cols=280 Identities=15% Similarity=0.164 Sum_probs=221.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHH
Q 013144 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (449)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (449)
+.++..+..+.+.++...++.....+..|.+.+++|+++.+.+++.+++.++..+++++.|+++||+|||+++.++.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 45566677888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCc
Q 013144 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (449)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 254 (449)
+++.++++++ ++++.++++|+++|++.|...+....++.|++|+++|+++.++...+..+|.++++.+.+.+.+..||
T Consensus 94 ~~~~~~~~~~--~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w 171 (426)
T PRK12307 94 SVGTGLSGLA--SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW 171 (426)
T ss_pred HHHHHHHHHH--hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH
Confidence 9999999999 99999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHH
Q 013144 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (449)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (449)
|+.|++.++..++. +......||+++.. + +.. +... ...+...+....++++++++|.++.......
T Consensus 172 ~~~f~i~~~~~~~~-~~~~~~~p~~~~~~------~-~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (426)
T PRK12307 172 RAAFFVGLLPVLLV-IYIRARAPESKEWE------E-AKL-SGKG----KHSQSAWSVFSLSMKGLFNRAQFPLTLCVFI 238 (426)
T ss_pred HHHHHHHHHHHHHH-HHHHHHCCCChHHH------H-hhh-hccc----cccccchhhhhHHHHHHHhhchHHHHHHHHH
Confidence 99998854433222 21111122221100 0 000 0000 0000011111235678888887765443322
Q ss_pred ---HHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 335 ---MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 335 ---~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
......+.+..++|.|+++ .|+++.+.+.......++.+++.++.|++.||++||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~ 296 (426)
T PRK12307 239 VLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLK 296 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 2223334467789999988 599998999988899999999999999999999988
No 32
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.98 E-value=1e-29 Score=244.02 Aligned_cols=264 Identities=16% Similarity=0.113 Sum_probs=222.3
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHH
Q 013144 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (449)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~ 180 (449)
...+.+..+...+......+.+|.+.+++|.+..+.++..+++.+++.++++++|+++||+|||++++.+.++.+++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 97 (413)
T PRK15403 18 PMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAA 97 (413)
T ss_pred HHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 34445556667778888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHH
Q 013144 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI 260 (449)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~ 260 (449)
++++ ++++.++++|+++|++.+...+...+++.|++|+++|++++++......+|..+||++++.+.+..|||+.|++
T Consensus 98 ~~~a--~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~ 175 (413)
T PRK15403 98 TLFT--TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAI 175 (413)
T ss_pred HHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 9999 99999999999999999877778888999999999999999999999999999999999999988999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHH
Q 013144 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (449)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (449)
.+++.++..+..++..||+++++++.. +.+....++++++|||.+|...+..++.....
T Consensus 176 ~~~~~~i~~~~~~~~lp~~~~~~~~~~---------------------~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~ 234 (413)
T PRK15403 176 IAVMGLIAFVGLLLAMPETVKRGAVPF---------------------SAKSVLRDFRNVFRNRLFLTGAATLSLSYIPM 234 (413)
T ss_pred HHHHHHHHHHHHHHhCCCCccccCCCC---------------------ChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 888877766655555666543211100 00111236678899999999888888888888
Q ss_pred HHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHH
Q 013144 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDML 387 (449)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 387 (449)
+.+..+.|.++++.+|+++.+.++.......+..++..+.+++.++.
T Consensus 235 ~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~ 281 (413)
T PRK15403 235 MSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP 281 (413)
T ss_pred HHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 88888899999998899999999988777777777777777665443
No 33
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.98 E-value=1.8e-29 Score=239.27 Aligned_cols=289 Identities=14% Similarity=0.127 Sum_probs=231.7
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhh
Q 013144 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (449)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 183 (449)
+..+.++..+......+.+|.+..+++.++.+.+++.+++.++..+++++.|+++||+|||++++.+.++.+++.++.++
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 44566677777778888899999999999999999999999999999999999999999999999999999998888887
Q ss_pred ccch-----hHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHH
Q 013144 184 AADT-----SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (449)
Q Consensus 184 ~~~~-----~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f 258 (449)
. + +++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++||.+++.+.+..|||+.|
T Consensus 84 ~--~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~ 161 (365)
T TIGR00900 84 V--ALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAI 161 (365)
T ss_pred H--HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 7 6 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHH
Q 013144 259 VIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSW 338 (449)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (449)
++.++..++..+..+...++++++.+..+.++ +. .++....++.++|+|.++...+..++...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (365)
T TIGR00900 162 WVDAVGFAISALLIVSVRIPELAASEIQALSN-AV----------------LRDTREGIKFVLKNPLLRTLLLLALLFNL 224 (365)
T ss_pred HHHHHHHHHHHHHHHhcccccCCCccccccch-hH----------------HHHHHhHHHHHHcCcHHHHHHHHHHHHHH
Confidence 98877666555444433322221111110000 00 00112245678889998888887777777
Q ss_pred HHHHHH-HHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhh
Q 013144 339 GFFVIL-SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (449)
Q Consensus 339 ~~~~~~-~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (449)
...... .+.|.|.++.+|.++.+.+.......++.+++.++.+++.||.+++ ..+..+....++..+.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~ 295 (365)
T TIGR00900 225 VFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM---------ALMTGAIFVIGLAILVVG 295 (365)
T ss_pred HHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh---------HHHHHHHHHHHHHHHHHH
Confidence 776666 8889999887899999999999999999999999999999999887 334444444555555444
Q ss_pred ccc
Q 013144 418 AAK 420 (449)
Q Consensus 418 ~~~ 420 (449)
..+
T Consensus 296 ~~~ 298 (365)
T TIGR00900 296 LTP 298 (365)
T ss_pred hhc
Confidence 443
No 34
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=4.7e-29 Score=240.57 Aligned_cols=271 Identities=15% Similarity=0.156 Sum_probs=215.8
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHH
Q 013144 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (449)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i 176 (449)
....+..+.+..+...+......+..|.+++++|+++.+.|++.+.+.+++.+++++.|++.||+|||+++.++.+++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~ 103 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYAL 103 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 34556667777788888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh---hhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh---
Q 013144 177 ATFLT---PWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS--- 250 (449)
Q Consensus 177 ~~~~~---~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~--- 250 (449)
+.+++ .++ ++++.++++|+++|+|.|...+..+.++.|+.|+++|+..+++.+..+.+|..+|+.+++.+..
T Consensus 104 ~~~l~~~~~~a--~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 104 GAALFWPAAEI--MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99875 456 8999999999999999999999999999998877777778999999999999999999876541
Q ss_pred ---------------h--------hCchHHHHHHHHHH-HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCC
Q 013144 251 ---------------Q--------AGIFGPFVIFGLSG-FLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGN 306 (449)
Q Consensus 251 ---------------~--------~gwr~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (449)
. .+||++|+....+. ++..++.....|+.+++++ .
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~---------------------~ 240 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH---------------------S 240 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc---------------------c
Confidence 0 25666665433332 2322222222232111100 0
Q ss_pred CCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHH
Q 013144 307 KHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYF-NFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSD 385 (449)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 385 (449)
+.+..+.....++++++|.++...+..++..........|.+.|+ ++.+|+++.++++.+....++.++++++++++.|
T Consensus 241 ~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~ 320 (438)
T PRK10133 241 DAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLIS 320 (438)
T ss_pred cccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000111223456888999988877777777777787888899885 5667999999999999999999999999999999
Q ss_pred HHHHh
Q 013144 386 MLIQR 390 (449)
Q Consensus 386 r~g~~ 390 (449)
|+++|
T Consensus 321 r~g~~ 325 (438)
T PRK10133 321 RFAPH 325 (438)
T ss_pred HcCHH
Confidence 99988
No 35
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.97 E-value=2.8e-30 Score=246.02 Aligned_cols=279 Identities=19% Similarity=0.236 Sum_probs=229.7
Q ss_pred HHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccc
Q 013144 107 ALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAAD 186 (449)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~ 186 (449)
.++..+++...++...|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||++++++.++.+++.++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-- 80 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS-- 80 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh--
Confidence 456777888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHH-HHHHHHHhhhCchHHHHHHHHHH
Q 013144 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGL-VLSPILMSQAGIFGPFVIFGLSG 265 (449)
Q Consensus 187 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~-~l~~~l~~~~gwr~~f~~~~~~~ 265 (449)
++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++ .+++.+.+..+||+.|++.+++.
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 81 TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 57777777889999999988887
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHH
Q 013144 266 FLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILS 345 (449)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (449)
++..++.++..++++++.+..+.++... +........++++.+......+.++++|.++...+..++..........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (379)
T TIGR00881 161 IIVSLICFLLLRDSPQSCGLPPAEEMPN---EEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILD 237 (379)
T ss_pred HHHHHHHheeeCCCccccccCccccCcc---cccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 7766666666666554322111110000 0000000001111112223456788999999998888888888888999
Q ss_pred HHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 346 WMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 346 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
+.|.|+++.+|+++.+++.......++.+++.++.+++.||..++
T Consensus 238 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~ 282 (379)
T TIGR00881 238 WSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNG 282 (379)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCC
Confidence 999999988899999999999999999999999999999987544
No 36
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=4.9e-30 Score=244.86 Aligned_cols=293 Identities=19% Similarity=0.238 Sum_probs=252.4
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhHhhhh-hhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHH
Q 013144 92 FITSERVKVVSMLALALALCNADRVVMS-VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWG 170 (449)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 170 (449)
...+-.+.++..++..++....+...++ ..+..+.+|++....+.+++.+++.++++++.+++|.+.||++..+.+...
T Consensus 38 l~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~ 117 (495)
T KOG2533|consen 38 LLRKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVS 117 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHH
Confidence 3444556777778888888888766554 445557899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHH-
Q 013144 171 VALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM- 249 (449)
Q Consensus 171 ~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~- 249 (449)
.+++++..++.+.. +|++.+++.|++.|+..+..+|....+++.|+.+++|+..++++.+..++|.++|.+++..+.
T Consensus 118 ~~~w~~~~~~~~~~--~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~ 195 (495)
T KOG2533|consen 118 GILWGLFGFLTAAV--HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFK 195 (495)
T ss_pred HHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhh
Confidence 99999988888777 999999999999999999999999999999999999999999999999999999999998864
Q ss_pred -----hhhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccc
Q 013144 250 -----SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKM 324 (449)
Q Consensus 250 -----~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (449)
...||||.|++.+++.++..++.++..|+.|++....+++|+....++.+..... ..+++..+..+++.+++|
T Consensus 196 ~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~dp 273 (495)
T KOG2533|consen 196 LNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSG--GIENKFKWKGFKEALKDP 273 (495)
T ss_pred hcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCC--CcccccCHHHHHHHHhch
Confidence 3468999999999999999999999999999988777777654443332221111 111115667888999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHH
Q 013144 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI 388 (449)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 388 (449)
.+|...+..++.....+++.+|+|.|+++..|++..++..+..+..++++++.+++|+++||++
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999966799999999999999999999999999999953
No 37
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.97 E-value=9.2e-31 Score=246.91 Aligned_cols=269 Identities=26% Similarity=0.398 Sum_probs=221.5
Q ss_pred HHHHHHHHHhHhhhhhhhh-hhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhh
Q 013144 105 ALALALCNADRVVMSVAIV-PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (449)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 183 (449)
+++.++..++.....+..| .+.+++|.++.+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 4567777888888889999 899999999999999999999999999999999999999999999999999999777777
Q ss_pred ccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHH
Q 013144 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (449)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~ 263 (449)
+ ++++.+++.|++.|++.+...+...+++.|++|+++|++++++......+|.+++|.+++.+.+..|||+.|++.++
T Consensus 82 ~--~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~ 159 (352)
T PF07690_consen 82 A--SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAI 159 (352)
T ss_dssp H--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHH
T ss_pred h--hhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccc
Confidence 6 77779999999999999999999999999999999999999999999999999999999999988899999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCch-hHHHhhccccHHHHHHHHHHHHHHHHH
Q 013144 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIP-PFRRLLSKMPTWSIIVANAMHSWGFFV 342 (449)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (449)
+.++..++.....++++++++..++++.+ ++.+.... .++.++++|.+|...+..+........
T Consensus 160 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (352)
T PF07690_consen 160 LSLIAAILFILFLPEPPPPRERESPKESE---------------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSG 224 (352)
T ss_dssp HHHHHHHHHHCCC---STTTT--SSTTTT-----------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHhhhhhhcccccccccccccc---------------cccccccccccccccccchhhhhhhhhhHHHHHHHH
Confidence 88887765444554444333221111100 00111112 256778888887666666666667888
Q ss_pred HHHHHHHHHHHhhCCc-ccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 343 ILSWMPIYFNFVYHID-LRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 343 ~~~~~~~~~~~~~g~s-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
...+.|.|+.+.+|++ ..+.+.......++.+++.++.+++.||++++
T Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 273 (352)
T PF07690_consen 225 FSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR 273 (352)
T ss_dssp HHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred hhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 9999999988888999 78999999999999999999999999998876
No 38
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=3.9e-29 Score=239.31 Aligned_cols=263 Identities=16% Similarity=0.115 Sum_probs=217.8
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhh
Q 013144 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (449)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~ 182 (449)
+.....+..........+.+|.+.+++|.++.+.++..+.+.++..+++++.|+++||+|||+.++.+.++.+++.+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~ 86 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 33344444555555666889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHH
Q 013144 183 WAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFG 262 (449)
Q Consensus 183 ~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~ 262 (449)
++ ++++.+++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..|||+.|++.+
T Consensus 87 ~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~ 164 (392)
T PRK10473 87 LA--ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMA 164 (392)
T ss_pred Hh--CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHH
Confidence 88 8999999999999999999999999999999999999999999999999999999999999888889999999988
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHH
Q 013144 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFV 342 (449)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (449)
++.++..++.++..||+++++++. +.......++.+++++++...+...+.......
T Consensus 165 ~~~~i~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (392)
T PRK10473 165 AMGILVLLLSLFILKETRPARAPA-----------------------ASSKPRENSESLLNRFFLSRLVITTLSVTVILT 221 (392)
T ss_pred HHHHHHHHHHHHHcCCCCCcccCC-----------------------ccchHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 887776666656666544321110 001112344677888877666655555555556
Q ss_pred HHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 343 ILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 343 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
+..+.|.++++.+|+++.+.+......+++.+++.++.+++.||+++|
T Consensus 222 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~ 269 (392)
T PRK10473 222 FVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPR 269 (392)
T ss_pred HHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 667778888887899999999999999999999999999999999988
No 39
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=3.8e-29 Score=245.23 Aligned_cols=288 Identities=14% Similarity=0.113 Sum_probs=233.1
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHH
Q 013144 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (449)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~ 179 (449)
.+.+++++.++..++...+.+..|.+.+++|.++.+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 35566777788888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHH
Q 013144 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (449)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~ 259 (449)
+++++ ++++.+++.|+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.+..|||+.|+
T Consensus 91 ~~~~~--~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~ 168 (471)
T PRK10504 91 FCALS--GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFL 168 (471)
T ss_pred HHHHh--CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHH
Confidence 98888 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHH----------HHhccC-cc------------------ccCCCCCC
Q 013144 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYI----------LREKQK-PL------------------LMGNKHKP 310 (449)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~------------------~~~~~~~~ 310 (449)
+......+..+......|+.+.+.++.+....... .+.... .. ...+++..
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNN 248 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 98877776666666665654433332222111000 000000 00 00001111
Q ss_pred CCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 311 ATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
+....+. +++|||.++...+..++..........+.|.|++..+|.++.++++...+..++.+++.++.+++.||+++|
T Consensus 249 ~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~ 327 (471)
T PRK10504 249 NRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR 327 (471)
T ss_pred CCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 1222233 578999998888888888877777778899999987899999999999888888888889999999999988
No 40
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.97 E-value=1.4e-29 Score=245.87 Aligned_cols=287 Identities=17% Similarity=0.157 Sum_probs=221.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHH
Q 013144 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (449)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (449)
.++|.++..+.+...........++...+.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 44677777777777666666677888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccchhHHHHHH-HHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC
Q 013144 175 SLATFLTPWAADTSLLALLA-MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (449)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~-~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 253 (449)
+++.++++++ ++++.+++ .|+++|++.+...+...+++.++++ ++|+++.++...+..+|..++|++++.+.+.+|
T Consensus 95 ~~~~~~~~~~--~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g 171 (455)
T TIGR00892 95 SLGMILASFS--SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG 171 (455)
T ss_pred HHHHHHHHHh--hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC
Confidence 9999999998 89998865 5799999999877778888999995 899999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCcc-ccCCCCCCCCCchhHHHhhccccHHHHHHH
Q 013144 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPL-LMGNKHKPATVIPPFRRLLSKMPTWSIIVA 332 (449)
Q Consensus 254 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (449)
||+.|++.+++.++..+..++..++.+.......+++ +.......... ......++.....++ +++++|.++...+.
T Consensus 172 wr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 249 (455)
T TIGR00892 172 WRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSK-EGLPPDGSTKKLSKKSTAEKINRFLDF-SLFTHRGFLVYLSG 249 (455)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCccccccccccc-ccCCCCCccccccccchhhhhhhhcch-HHhcCchHHHHHHH
Confidence 9999999988877665555554443221110000000 00000000000 000000000011122 57788999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHH
Q 013144 333 NAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDML 387 (449)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 387 (449)
.++.....+....++|.|+++ .|++..+++.+.++.+++.++++++.|++.||.
T Consensus 250 ~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 303 (455)
T TIGR00892 250 NVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLK 303 (455)
T ss_pred HHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 887777878888899999987 699999999999999999999999999999973
No 41
>PRK09952 shikimate transporter; Provisional
Probab=99.97 E-value=4.4e-29 Score=241.60 Aligned_cols=276 Identities=14% Similarity=0.080 Sum_probs=206.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHhHhhhhhhhhh-hhhhc--CCCchhhHHHH-----HHHHHHHHHhhccchhhhhhcCCc
Q 013144 93 ITSERVKVVSMLALALALCNADRVVMSVAIVP-LSLAH--GWSRSFSGIVQ-----SSFLWGYLVSPIAGGTLVDYYGGK 164 (449)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~--~~~~~~~g~~~-----s~~~~~~~~~~~~~G~l~dr~Grr 164 (449)
+..+++..+....++.+.+++|...++...+. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr 94 (438)
T PRK09952 16 SLSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRK 94 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccH
Confidence 33445667778888999999999999988775 45555 66665 45554 345566788999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhccchhHH--------HHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhh
Q 013144 165 IIMAWGVALWSLATFLTPWAADTSLL--------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS 236 (449)
Q Consensus 165 ~~l~~~~~~~~i~~~~~~~~~~~~~~--------~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~ 236 (449)
++++++.+++++++++++++ ++++ .++++|+++|++.|..++....++.|++|+++|++..+....+..+
T Consensus 95 ~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~ 172 (438)
T PRK09952 95 RMLMLTVWMMGIATALIGLL--PSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGV 172 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999 8876 5889999999999999999999999999999999999999999999
Q ss_pred hhHhHHHHHHHHHh--------hhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCC
Q 013144 237 GNAIGLVLSPILMS--------QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKH 308 (449)
Q Consensus 237 G~~~g~~l~~~l~~--------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (449)
|.+++..+...+.. .+|||+.|++.+++.++. +......||+|+.. +.. ++. ++
T Consensus 173 G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~------~~~---~~~-------~~- 234 (438)
T PRK09952 173 GLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFE------QQQ---HEQ-------AA- 234 (438)
T ss_pred HHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHH------HHH---hhc-------cc-
Confidence 99999887776653 479999999887765442 22222233333210 000 000 00
Q ss_pred CCCCCchhHHHhhccccHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHH
Q 013144 309 KPATVIPPFRRLLSKMPTWSIIV-ANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDML 387 (449)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 387 (449)
.+......+.++++|+.+...+ ..++..+..+....|.|.|+++.+|++...........++..+++.++.|+++||+
T Consensus 235 -~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~ 313 (438)
T PRK09952 235 -AKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF 313 (438)
T ss_pred -ccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0001112334667777666544 45555667777889999999888888877655555566777788889999999999
Q ss_pred HHh
Q 013144 388 IQR 390 (449)
Q Consensus 388 g~~ 390 (449)
+||
T Consensus 314 grr 316 (438)
T PRK09952 314 GRR 316 (438)
T ss_pred Cch
Confidence 988
No 42
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=2.9e-29 Score=239.09 Aligned_cols=256 Identities=16% Similarity=0.211 Sum_probs=219.8
Q ss_pred HhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHH
Q 013144 113 ADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLAL 192 (449)
Q Consensus 113 ~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l 192 (449)
+....+.+.+|.+.+++|+++.+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++.+. ++++.+
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~--~~~~~~ 82 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA--QTIDQL 82 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH--ccHHHH
Confidence 344567788999999999999999999999999999999999999999999999999999999999999998 999999
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHH
Q 013144 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVW 272 (449)
Q Consensus 193 ~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 272 (449)
++.|+++|++.+...+...+++.|++|+++|++++++......+|..++|.+++.+.+..|||+.|++.+++.++..+..
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888877766666
Q ss_pred HHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013144 273 LSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFN 352 (449)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (449)
.+..||+++++++.+ .+.+....++++.+++|.++...+..++.....+.+..+.|.++.
T Consensus 163 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (377)
T PRK11102 163 FFFIPETLPKERRQP--------------------FHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYI 222 (377)
T ss_pred HHhCCccCcccccCC--------------------CChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 555565433211100 000111235567888888888777777777777777788888888
Q ss_pred HhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 353 FVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 353 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
+.+|+++.+.+.+.....++.+++.++.+++.||+|+|
T Consensus 223 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~ 260 (377)
T PRK11102 223 ELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGAL 260 (377)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 87899999999999999999999999999999999988
No 43
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=3.8e-29 Score=239.98 Aligned_cols=293 Identities=22% Similarity=0.272 Sum_probs=226.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHH
Q 013144 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (449)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (449)
+++|..+....+..+..+++.....+..|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+.+..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 34566667777777888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCc
Q 013144 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (449)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 254 (449)
+++.++.++. ++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..||
T Consensus 93 ~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~ 170 (398)
T TIGR00895 93 SVFTLLCALA--TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW 170 (398)
T ss_pred HHHHHHHHHc--cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc
Confidence 9999999888 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHh----ccCccc--cCCCCCC-CCCchhHHHhhcc---c
Q 013144 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILRE----KQKPLL--MGNKHKP-ATVIPPFRRLLSK---M 324 (449)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~-~~~~~~~~~~~~~---~ 324 (449)
++.|++.+++.++..++.+...|++++...+.++++..+..++ ...+.. ..+++.+ +......+.++++ +
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTAR 250 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHH
Confidence 9999998766666666666666666542211122211111111 000000 0000011 1111122223332 2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
..+...+..++.....+....+.|.+..+ +|+++.+++.......++.+++.++.+++.||+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLPKLMVE-LGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR 315 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH
Confidence 34444555556666677777888855544 799999999999999999999999999999999877
No 44
>PRK15075 citrate-proton symporter; Provisional
Probab=99.97 E-value=1.5e-28 Score=237.98 Aligned_cols=269 Identities=15% Similarity=0.124 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHH-HHHH-----HHHHHHhhccchhhhhhcCCchHHHHH
Q 013144 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIV-QSSF-----LWGYLVSPIAGGTLVDYYGGKIIMAWG 170 (449)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~-~s~~-----~~~~~~~~~~~G~l~dr~Grr~~l~~~ 170 (449)
|++....++++.++.++|...++...|.+.++++.++.+.+.+ .+.. .++..+++++.|+++||+|||++++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 4556888899999999999999999999999999988876544 3332 222346889999999999999999999
Q ss_pred HHHHHHHHHHhhhccchhHH--------HHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHH
Q 013144 171 VALWSLATFLTPWAADTSLL--------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGL 242 (449)
Q Consensus 171 ~~~~~i~~~~~~~~~~~~~~--------~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~ 242 (449)
.+++++++++++++ ++++ .++++|+++|++.|...+....+++|++|+++|++++++...+.++|..+++
T Consensus 93 ~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 93 LSIMASGTLLIAFV--PGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 8876 4689999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHH--------hhhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCc
Q 013144 243 VLSPILM--------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVI 314 (449)
Q Consensus 243 ~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (449)
.+++.+. +.+|||++|++.++...+. ++.....|+.. +..+ ++ ++ .+..
T Consensus 171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~----~~~~~~~~e~~-----~~~~---~~--------~~---~~~~ 227 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFI----FLIRRSLEETE-----EFLA---RK--------HR---PSMR 227 (434)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH----HHHHHhcCCCH-----HHHH---hh--------hc---cccc
Confidence 8887763 4679999998754432211 11111111110 0000 00 00 0111
Q ss_pred hhHHHhhccccHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 315 PPFRRLLSKMPTWSI-IVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 315 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
..++...++++.+.. .+..++.....+....|.|.|+++.+|++..++++...+..++.+++.++.|+++||++||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r 304 (434)
T PRK15075 228 EIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRR 304 (434)
T ss_pred cHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 223344555554443 3334445566777889999999988899998888888888899999999999999999988
No 45
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=4.1e-28 Score=232.42 Aligned_cols=268 Identities=18% Similarity=0.205 Sum_probs=222.2
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHH
Q 013144 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (449)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i 176 (449)
.++.+.++.+......+......+.+|.+.+++|.++.+.+++.+.+.++..++++++|+++||+|||+++.++.++..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 44555555566666677777888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchH
Q 013144 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (449)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~ 256 (449)
+.+++.++ ++++.+++.|++.|++.+...+....+..|.+++++|+++.++...+..+|..++|.+++.+.+..|||+
T Consensus 86 ~~~~~~~~--~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~ 163 (394)
T PRK11652 86 GTLVALFA--HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRA 163 (394)
T ss_pred HHHHHHHH--ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHH
Confidence 99999888 9999999999999999998888888999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHH
Q 013144 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (449)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (449)
.|++.++..++..+...+..||+++..++. ++....+++.+++|.++...+..+..
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (394)
T PRK11652 164 CYLFLLLLGAGVTFSMARWMPETRPADARR------------------------TRVLASYRTLLSNRRFNCYLLMLIGT 219 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccCccccch------------------------hHHHHHHHHHHcChHHHHHHHHHHHH
Confidence 999988777665555555556544321110 00123566788888888766666666
Q ss_pred HHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
......+..+.+.++++.+|+++.+.++......++.+++..+.+++.||.+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 273 (394)
T PRK11652 220 LAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL 273 (394)
T ss_pred HHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666677788899888899999999888887788888888888888888743
No 46
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.97 E-value=3.6e-28 Score=235.66 Aligned_cols=290 Identities=19% Similarity=0.231 Sum_probs=226.4
Q ss_pred hHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHH
Q 013144 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS 175 (449)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 175 (449)
.++..+..+.+.+...+.+...+....|.+.+ +|+++.+.+++.+++.++..++.++.|+++||+|||+++.++.++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~ 102 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHH
Confidence 35666677777777777777777878888876 59999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcc--chhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh-hh
Q 013144 176 LATFLTPWAA--DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QA 252 (449)
Q Consensus 176 i~~~~~~~~~--~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~-~~ 252 (449)
++.+++++.+ .++++.+.+.|++.|++.|..++.....+.|++|+++|++++++.+.+..+|..+++.+.+.+.+ ..
T Consensus 103 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 182 (438)
T TIGR00712 103 AVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFN 182 (438)
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhh
Confidence 9988876641 14678888999999999999899999999999999999999999999999999999888776444 57
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchh-HHHhhccccHHHHHH
Q 013144 253 GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPP-FRRLLSKMPTWSIIV 331 (449)
Q Consensus 253 gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 331 (449)
|||+.|++.++++++..++.++..||+|++.+..+.++.+. +..... .++.+.+.+.... .+.++|++.+|...+
T Consensus 183 ~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (438)
T TIGR00712 183 DWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRN--DYPDDY--NEKAEQELTAKEIFMQYVLPNKLLWYIAI 258 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhccc--cccccc--ccccccccchHHHHHHHHccCchHHHHHH
Confidence 99999999988887766666666676654321111110000 000000 0000011111111 234788999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 332 ANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
..++.....+....++|.|+++..|+++.++++...+..++++++.+++|++.||++++
T Consensus 259 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 259 ANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKG 317 (438)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 88887878888889999999998899999999999999999999999999999999654
No 47
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.97 E-value=1.3e-29 Score=253.18 Aligned_cols=290 Identities=17% Similarity=0.184 Sum_probs=227.4
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHH
Q 013144 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (449)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~ 180 (449)
++.+++..+.........+.+++.+.++|+++..+.|++.+.+.++++++.++.|++.||+|||+.+.++++++++++++
T Consensus 35 ~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll 114 (633)
T TIGR00805 35 SLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFL 114 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHH
Confidence 34455566777777888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcc-------------------------------------------------chhHHHHHHHHHHHhhhhhhhhhHHH
Q 013144 181 TPWAA-------------------------------------------------DTSLLALLAMRAVVGLAEGVALPAMN 211 (449)
Q Consensus 181 ~~~~~-------------------------------------------------~~~~~~l~~~r~l~G~g~g~~~~~~~ 211 (449)
+++.. ...+..++++|+++|+|.+..++...
T Consensus 115 ~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~ 194 (633)
T TIGR00805 115 LSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGI 194 (633)
T ss_pred HhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCc
Confidence 87751 00256788999999999999999999
Q ss_pred HHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh----------------------CchHHHHHHHHHHHHHH
Q 013144 212 NMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA----------------------GIFGPFVIFGLSGFLWV 269 (449)
Q Consensus 212 ~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~----------------------gwr~~f~~~~~~~~~~~ 269 (449)
+++.|++|+++|+++++++.....+|.++|+++++++.+.+ +|+..|++.+++.++..
T Consensus 195 ~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~ 274 (633)
T TIGR00805 195 SYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTS 274 (633)
T ss_pred hhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988643 26777888888877766
Q ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHhc-cCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHH
Q 013144 270 LVWLSATSSTPDRHPQISKYELEYILREK-QKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMP 348 (449)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (449)
+.++++.++.|+...+.+.+..+...... ............+.....+++++++|.++...+..++.....+++.+|+|
T Consensus 275 v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP 354 (633)
T TIGR00805 275 IPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLP 354 (633)
T ss_pred HHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555444444322111110000000000 00000000000112234577899999999999999999999999999999
Q ss_pred HHHHHhhCCcccchhhHhhHHHH-HHHHHHHHHHHHHHHHHHh
Q 013144 349 IYFNFVYHIDLRQASWFSAVPWS-VMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 349 ~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~ 390 (449)
.|+++.+|+++.+++++.....+ +.+++.+++|+++||++.+
T Consensus 355 ~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 355 KYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 99999999999999999887766 5688999999999999855
No 48
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.97 E-value=1.8e-28 Score=241.16 Aligned_cols=305 Identities=17% Similarity=0.185 Sum_probs=215.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhc--------CCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchH
Q 013144 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAH--------GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKII 166 (449)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~ 166 (449)
+...+...+..++.+..+++...+++..+.+++++ +.++.+.+++.+.+.++..++++++|+++||+|||++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34556677777888999999999999999888877 8889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcc----------chhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhh
Q 013144 167 MAWGVALWSLATFLTPWAA----------DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS 236 (449)
Q Consensus 167 l~~~~~~~~i~~~~~~~~~----------~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~ 236 (449)
++++.+++.++.+++++.. .+.++.++++|+++|++.|...+...++++|++|+++|++++++.+.+..+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~ 167 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIF 167 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHH
Confidence 9999999999988876530 133677899999999999999999999999999999999999999999999
Q ss_pred hhHhHHHHHHHHH--------hhhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CCCHHHHHHHHHhccCccccCCC
Q 013144 237 GNAIGLVLSPILM--------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP-QISKYELEYILREKQKPLLMGNK 307 (449)
Q Consensus 237 G~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 307 (449)
|.++++.+++.+. +..|||+.|++.++..++..+. .+..||+|+... +.+.++.+...++....
T Consensus 168 G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~------ 240 (479)
T PRK10077 168 GQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQAEGILRKIMGN------ 240 (479)
T ss_pred HHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHcCCHHHHHHHHHHHcCC------
Confidence 9999988877654 3468999999988777776544 445677664311 11122211111111100
Q ss_pred CCCCCCchhHHHhhc-----cccHH-----H----HHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHH
Q 013144 308 HKPATVIPPFRRLLS-----KMPTW-----S----IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVM 373 (449)
Q Consensus 308 ~~~~~~~~~~~~~~~-----~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 373 (449)
.+.+....+.++.++ .+..+ . .....+......+...++.|.++++ .|.+.....+.....++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~ 319 (479)
T PRK10077 241 TLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVIN 319 (479)
T ss_pred hhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHH
Confidence 000000001111110 00100 0 0111112222233445666777766 6888777777777888889
Q ss_pred HHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHh
Q 013144 374 AFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (449)
Q Consensus 374 ~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (449)
+++.++.++++||+||| .++..+.+..+++.+.+
T Consensus 320 ~i~~~~~g~l~dr~g~r---------~~~i~~~~~~~v~~~~l 353 (479)
T PRK10077 320 LTFTVLAIMTVDKFGRK---------PLQIIGALGMAIGMFSL 353 (479)
T ss_pred HHHHHHHHHHHHHhcCh---------HHHHHhHHHHHHHHHHH
Confidence 99999999999999988 44455555555544443
No 49
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=1e-27 Score=230.21 Aligned_cols=259 Identities=20% Similarity=0.174 Sum_probs=216.7
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhh
Q 013144 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (449)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~ 182 (449)
.+.+...+.++....+.+..|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+++..+.++..++.++++
T Consensus 10 ~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 89 (401)
T PRK11043 10 YLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGML 89 (401)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHH
Confidence 33333455566677888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHH
Q 013144 183 WAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFG 262 (449)
Q Consensus 183 ~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~ 262 (449)
++ ++++.+++.|+++|++.+...+...+++.|++|++++++..+.......+|..++|.+++.+.+..|||+.|++.+
T Consensus 90 ~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~ 167 (401)
T PRK11043 90 WV--ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLF 167 (401)
T ss_pred Hh--cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Confidence 98 9999999999999999988888888999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHH
Q 013144 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFV 342 (449)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (449)
++.++..+..++..+++++++ + ++...++++++|+|+++...+...+.....+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~-~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (401)
T PRK11043 168 AITLLLILPTLRLKPSKKARK-Q-------------------------SQDALTFKQLLKSKTYLGNVLIFAACSAAFFA 221 (401)
T ss_pred HHHHHHHHHHHHcCCCCCccc-c-------------------------chHHHHHHHHHcChhHHHHHHHHHHHHHHHHH
Confidence 887776665554433322110 0 00113566788888887766666666666677
Q ss_pred HHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 343 ILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 343 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
+..+.|.++++ +|+++.+.++......++.+++.++.+++.||+++|
T Consensus 222 ~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~ 268 (401)
T PRK11043 222 WLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGE 268 (401)
T ss_pred HHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 77889998877 699999999888888888899999999999999877
No 50
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.97 E-value=1.4e-28 Score=241.93 Aligned_cols=294 Identities=17% Similarity=0.118 Sum_probs=210.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCC--------chhhHHHHHHHHHHHHHhhccchhhhhhcCCchH
Q 013144 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWS--------RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKII 166 (449)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~ 166 (449)
++.+....++.++.+...++.....+..+.+.++++.+ ..+.+++.+++.++..++++++|+++||+|||++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~ 103 (481)
T TIGR00879 24 WKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKS 103 (481)
T ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHH
Confidence 34445555566666777888888999999998888777 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcc-chhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHH
Q 013144 167 MAWGVALWSLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS 245 (449)
Q Consensus 167 l~~~~~~~~i~~~~~~~~~-~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~ 245 (449)
++++.++..++.+++.+.. ..+++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 104 LLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999885541 145678999999999999999999999999999999999999999999999999999999
Q ss_pred ---HHHHhhhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CCCHHHHHHHHHhccCccc----------------cC
Q 013144 246 ---PILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP-QISKYELEYILREKQKPLL----------------MG 305 (449)
Q Consensus 246 ---~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------------~~ 305 (449)
..+.+..|||+.|++.++..++..+ ..+..||+|+... +.+.++......+...... ..
T Consensus 184 ~~~~~~~~~~~w~~~f~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (481)
T TIGR00879 184 SGKVSLNNTLGWRIPLGLQLIPAGLLFL-GLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSI 262 (481)
T ss_pred HHhhcCCCCccHHHHHHHHHHHHHHHHH-HHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHH
Confidence 6655677999999996665555444 3444566553210 1111111111100000000 00
Q ss_pred CCCCCCCCchhHHHhhc---cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHH
Q 013144 306 NKHKPATVIPPFRRLLS---KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGL 382 (449)
Q Consensus 306 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~ 382 (449)
+.+..+..+..+.+..+ .+.++...+..+...........+.|.++++ .|++..+.+....+..++.+++.++.++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 341 (481)
T TIGR00879 263 EKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIF 341 (481)
T ss_pred HHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000111112222221 2223333333333333344556677777766 6999888888888999999999999999
Q ss_pred HHHHHHHh
Q 013144 383 LSDMLIQR 390 (449)
Q Consensus 383 l~dr~g~~ 390 (449)
+.||++||
T Consensus 342 l~d~~~~~ 349 (481)
T TIGR00879 342 LVDRFGRR 349 (481)
T ss_pred HHHHhcch
Confidence 99999988
No 51
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=2.1e-27 Score=227.06 Aligned_cols=289 Identities=17% Similarity=0.161 Sum_probs=223.6
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHH
Q 013144 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (449)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~ 180 (449)
+.+++...+..++.....++..|.+++++|+++.+.|++.+.+.+++.+++++.|++.||+|||+++.++.++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 45666777777888888899999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhhcc-chhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh--------
Q 013144 181 TPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-------- 251 (449)
Q Consensus 181 ~~~~~-~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~-------- 251 (449)
+..+. .++++.+++.|++.|+|.|...+..+.++.+..|+++|++.+++.+...++|..+||.+++.+...
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 64431 168999999999999999999999999999999999999999999999999999999999887532
Q ss_pred ------------------hCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCC
Q 013144 252 ------------------AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATV 313 (449)
Q Consensus 252 ------------------~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (449)
.+||++|++.+++.++..++..+. +. |+.++. + + ++.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~-~~-p~~~~~-~------------------~--~~~~~ 221 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLT-KM-PALNHS-D------------------A--KQISF 221 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC-CCCCcc-c------------------c--ccccc
Confidence 469999999888776655444322 21 111100 0 0 00111
Q ss_pred chhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCC
Q 013144 314 IPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVY-HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGT 392 (449)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 392 (449)
..+.++++|+|+++...+..++.........++++.|.++.. +.+...++........+..+|+++++++.||+++|
T Consensus 222 ~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~-- 299 (410)
T TIGR00885 222 SASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH-- 299 (410)
T ss_pred hhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH--
Confidence 124457888999988888888877777788899999997632 33444445566666677899999999999999887
Q ss_pred CchhhHHHHHHHHhHHHHHHHHHhhcccc
Q 013144 393 SVTLTRKILQSIGFIAPGIALIGLTAAKS 421 (449)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (449)
..+.+..+...+..+.....++
T Consensus 300 -------~~l~i~~~~~~~~~ll~~~~~~ 321 (410)
T TIGR00885 300 -------KVLMAYAIIGMALCLGSIFAGG 321 (410)
T ss_pred -------HHHHHHHHHHHHHHHHHHHcCC
Confidence 2333444444444444444444
No 52
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.97 E-value=1.4e-27 Score=235.35 Aligned_cols=293 Identities=12% Similarity=0.054 Sum_probs=211.9
Q ss_pred chhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhc-----CCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHH
Q 013144 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAH-----GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMA 168 (449)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~ 168 (449)
.+.++..+.++.++.+..+++....+.+.+.+..++ +.+..+.+++.+.+.++..++++++|+++||+|||+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~ 90 (502)
T TIGR00887 11 GWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYG 90 (502)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 456677888889999999999999999988887642 355667899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccchh------HHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHH
Q 013144 169 WGVALWSLATFLTPWAADTS------LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGL 242 (449)
Q Consensus 169 ~~~~~~~i~~~~~~~~~~~~------~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~ 242 (449)
+++++..++.++++++ ++ ++.++++|+++|++.|...+....++.|++|+++|++++++.+....+|.++++
T Consensus 91 ~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~ 168 (502)
T TIGR00887 91 MELIIMIIATVASGLS--PGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGA 168 (502)
T ss_pred HHHHHHHHHHHHHHHc--cCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998887 54 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh-----------------------hhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCC---CCCCHHHHHHHHH
Q 013144 243 VLSPILMS-----------------------QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRH---PQISKYELEYILR 296 (449)
Q Consensus 243 ~l~~~l~~-----------------------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 296 (449)
.++..+.. ..+||+.|.+.++.+++..+ ..+..||+|+.. .+.+++..+...+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lpESpr~l~~~~~~~~~a~~~~~~ 247 (502)
T TIGR00887 169 IVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALY-FRLTIPETPRYTADVAKDVEQAASDMSA 247 (502)
T ss_pred HHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHH-HHHhCCCCHHHHHHhCcchHHHHHHHHH
Confidence 98876542 13799999887776665444 445678888742 2211111111111
Q ss_pred hccCc--cccCC----CCCCCCCchhHHHhhcc---ccH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchh
Q 013144 297 EKQKP--LLMGN----KHKPATVIPPFRRLLSK---MPT----WSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQAS 363 (449)
Q Consensus 297 ~~~~~--~~~~~----~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 363 (449)
..... ...++ +++++....++++++++ ++. +.+....+.....+++...+.|.++++ .|++..+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~ 326 (502)
T TIGR00887 248 VLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAAT 326 (502)
T ss_pred HhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccc
Confidence 11100 00000 00011112356666653 222 222233344445566777788999976 588765332
Q ss_pred h------------HhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 364 W------------FSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 364 ~------------~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
. ......++.+++.++.++++||+|||
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR 365 (502)
T TIGR00887 327 NNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK 365 (502)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch
Confidence 1 12333445677888999999999998
No 53
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=1.4e-27 Score=227.80 Aligned_cols=265 Identities=15% Similarity=0.109 Sum_probs=205.2
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhh
Q 013144 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (449)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~ 182 (449)
.++++.++..+.........+.+.++++.++.+.+++.+.+.+++.++.+++|+++||+|||++++++.++.+++.++++
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 34566666666555556666677889999999999999999999999999999999999999999999999999988887
Q ss_pred hccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHH
Q 013144 183 WAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFG 262 (449)
Q Consensus 183 ~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~ 262 (449)
+. .+. ++.|+++|++.+...|+..+++.|++|+++|++++++.+....+|.++||.+++.+.+. .|+..+.+.+
T Consensus 87 ~~--~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~ 160 (393)
T PRK11195 87 FG--IHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCA 160 (393)
T ss_pred HH--HHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 77 664 78899999999999999999999999999999999999999999999999999999886 4777777665
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHH
Q 013144 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFV 342 (449)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (449)
...++.. +..+..||.++++++.+.+..... + +.+..++.++++|.+........+.......
T Consensus 161 ~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~-~---------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 223 (393)
T PRK11195 161 LIYLLAA-LFNLFIPRLGARRPGQSWNPIALL-R---------------DFFHACRVLWRDKLGRFSLAGTTLFWGAGAT 223 (393)
T ss_pred HHHHHHH-HHHhcCCCCcccccccCCCHHHHH-H---------------HHHHHHHHHHhCchhHHHHHHHHHHHHHHHH
Confidence 5444333 333445554432221111100000 0 0012345678888776655555555555566
Q ss_pred HHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 343 ILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 343 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.....|.|+++.+|.++.+.|+.....+++.+++.++.+++.||.+++
T Consensus 224 ~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~ 271 (393)
T PRK11195 224 LRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL 271 (393)
T ss_pred HHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 667778888888999999999999999999999999999998887665
No 54
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.96 E-value=2.9e-27 Score=226.74 Aligned_cols=266 Identities=12% Similarity=0.045 Sum_probs=206.9
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhh-
Q 013144 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP- 182 (449)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~- 182 (449)
..++.+............++++.+++|.++.+.|++.+.+.++..+++++.|++.||+|||+++..+.++.+++.+++.
T Consensus 18 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~ 97 (402)
T TIGR00897 18 GYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIV 97 (402)
T ss_pred HHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 3334333444433444456667789999999999999999999999999999999999999999999999998876553
Q ss_pred --hccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhh-HhHHHHHHHHHhhhCchHHHH
Q 013144 183 --WAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGN-AIGLVLSPILMSQAGIFGPFV 259 (449)
Q Consensus 183 --~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~-~~g~~l~~~l~~~~gwr~~f~ 259 (449)
.. .++++.+++.|+++|++.+...+...+++.+++|+++|++++|+...+.++|. +++|++++.+.+..||+..+|
T Consensus 98 ~~~~-~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~ 176 (402)
T TIGR00897 98 FGLG-HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLW 176 (402)
T ss_pred Hhcc-CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHH
Confidence 21 15788899999999999988888888899999999999999999999999997 689999999988889776666
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHH
Q 013144 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWG 339 (449)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (449)
......++..++.++..++.++.+++.+ +.+.++....++.++|+|.++...+..++....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (402)
T TIGR00897 177 SALAFVLTGGVIALFSNKDIFTPQHMQT-------------------REKFSELGKAATILFTNPNVLLGGMVRIINTIG 237 (402)
T ss_pred HHHHHHHHHHHHHHhccCCCCCcccccC-------------------CcchhhHHHHHHHHHcChhHHHHHHHHHHHHHH
Confidence 5544433333334444443322111000 000111123466789999999888888888888
Q ss_pred HHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 340 FFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 340 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.+...++.|.|+++ +|++..+.+.......++.+++.++.|+++||++||
T Consensus 238 ~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 287 (402)
T TIGR00897 238 LFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWM 287 (402)
T ss_pred HHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 88899999999977 799999999988889999999999999999999987
No 55
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=1.7e-27 Score=228.60 Aligned_cols=283 Identities=21% Similarity=0.185 Sum_probs=207.3
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhhhhhh-hhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHH
Q 013144 98 VKVVSMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (449)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i 176 (449)
++.+..+++..++..++.....+.+|. +.+++|.++.+.|++.+++.++..+++++.|+++||+|||++++.+.++.++
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCAL 93 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHH
Confidence 344556777777788888888888887 6788999999999999999999999999999999999999999999998888
Q ss_pred HHHHhhhcc------chhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh
Q 013144 177 ATFLTPWAA------DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (449)
Q Consensus 177 ~~~~~~~~~------~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~ 250 (449)
+.+.++++. ..+++.+++.|+++|++.+...+...+++.|++|+++|++++++......+|.++|+.+++.+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 173 (399)
T PRK05122 94 SGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH 173 (399)
T ss_pred HHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 776655431 02577899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHH
Q 013144 251 QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSII 330 (449)
Q Consensus 251 ~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (449)
..||++.+++.++..++..+.. . +.|+.++..+ + ..++++.++ +++...
T Consensus 174 ~~g~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~---------------------~----~~~~~~~~~--~~~~~~ 222 (399)
T PRK05122 174 WGGLAGLGLLIMLLALLGLLLA-R---PRPAVPPVKG---------------------E----RLPFRRVLG--RVWPYG 222 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHH-h---cCCCCCCCCc---------------------c----chhHHHHHH--HHHHHH
Confidence 9999999887666554433222 1 1121111000 0 012223332 222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHH
Q 013144 331 VANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPG 410 (449)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 410 (449)
....+..........+.+.|+.+ .|+ .+.+.......++.+++.++.+++.||+++| ..+..+....+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~---------~~~~~~~~~~~ 290 (399)
T PRK05122 223 MGLALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRLGGL---------RVAIVSLLVEI 290 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHHHHHHHHH
Confidence 33333444555667788888876 365 3456666778888899999999999999877 23344444445
Q ss_pred HHHHHhhcccchh
Q 013144 411 IALIGLTAAKSPV 423 (449)
Q Consensus 411 ~~~~~~~~~~~~~ 423 (449)
++.+.+...++.+
T Consensus 291 ~~~~~~~~~~~~~ 303 (399)
T PRK05122 291 LGLLLLWLAPSPW 303 (399)
T ss_pred HHHHHHHHhccHH
Confidence 5544444444433
No 56
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=1.6e-27 Score=227.02 Aligned_cols=258 Identities=17% Similarity=0.099 Sum_probs=205.3
Q ss_pred HHHHHHHHhHhhhhhhhhh-hhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHH-HHHHHHHHHHHhhh
Q 013144 106 LALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAW-GVALWSLATFLTPW 183 (449)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~-~~~~~~i~~~~~~~ 183 (449)
+.++...+......+.+|. +++++|.++.+.|++.+.+.+...+.+++.|+++||+||||.++. +.++..++.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 3456666666777777776 578899999999999999999999999999999999999887654 55666677788888
Q ss_pred ccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHH--HHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHH
Q 013144 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARA--VAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIF 261 (449)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~--~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~ 261 (449)
+ ++++.+++.|+++|.+.+...|...++..|+.|+++|++. .+....+.++|..+||.+++.+.+.+|||+.|++.
T Consensus 84 ~--~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~ 161 (375)
T TIGR00899 84 N--RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTA 161 (375)
T ss_pred c--chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHH
Confidence 8 9999999999999988888889889999999887777654 67888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHH
Q 013144 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (449)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (449)
++..++..++.++..||.|++.++.+ ...+.++.+++|+++...+..++......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (375)
T TIGR00899 162 ALAFVLCGVLVWLFLPSYPRGAPGAL-------------------------TRLEVRGLLASRDTRLLFVACTLMWGCNI 216 (375)
T ss_pred HHHHHHHHHHHHHhCCCcccCccccc-------------------------CcchhhhhhcCcchHHHHHHHHHHHHHHH
Confidence 88877776666666666553221100 00123346677777766665555555555
Q ss_pred HHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
....++|.|+++.+|.++.+.+.......+..+++.++.|++.||+++|
T Consensus 217 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~ 265 (375)
T TIGR00899 217 LYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR 265 (375)
T ss_pred HHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch
Confidence 6667889999888899999999888777777788889999999999988
No 57
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.96 E-value=3.6e-27 Score=232.94 Aligned_cols=285 Identities=17% Similarity=0.172 Sum_probs=212.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHH
Q 013144 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (449)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (449)
+++|+.+..+++..++..++.....+..|.+.+++|+++.+.+++.+.+.++..++.++.|+++||+|||++++.+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 45677888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCc
Q 013144 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (449)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 254 (449)
+++.++++++ ++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+.+..||
T Consensus 96 ~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 173 (496)
T PRK03893 96 SVGTLACGFA--PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW 173 (496)
T ss_pred HHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 9999999998 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC-CHHHHHHHHHhccCccccCCCCCCCCCchh---------HHHhh---
Q 013144 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQI-SKYELEYILREKQKPLLMGNKHKPATVIPP---------FRRLL--- 321 (449)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--- 321 (449)
|+.|++.++..++ .++.....|+.++..++. ++.+.+...+... . .++..... ....+
T Consensus 174 ~~~f~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (496)
T PRK03893 174 RALFFIGILPIIF-ALWLRKNLPEAEDWKEKHAGKAPVRTMVDILY------R--GEHRIINILLTLAAAAALWFCFAGN 244 (496)
T ss_pred HHHHHHHHHHHHH-HHHHHHhCCCchhhhhhccccccchhHHHHHh------c--chhHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999875443333 222223334332211000 0000000000000 0 00000000 00000
Q ss_pred ----------------------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHH
Q 013144 322 ----------------------------SKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVM 373 (449)
Q Consensus 322 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 373 (449)
+.+......+..+......+....++|.|+++.+|++..+++.+.+...++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~ 324 (496)
T PRK03893 245 LQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGA 324 (496)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHH
Confidence 0000011111111111111235578999998778999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 013144 374 AFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 374 ~~~~~~~g~l~dr~g~~ 390 (449)
+++.++.|++.||+++|
T Consensus 325 ~~g~~~~g~l~dr~g~~ 341 (496)
T PRK03893 325 AVGCCVGGFLGDWLGTR 341 (496)
T ss_pred HHHHHHHHHHHHHhcch
Confidence 99999999999999988
No 58
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=6.8e-27 Score=222.76 Aligned_cols=258 Identities=16% Similarity=0.130 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHH
Q 013144 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (449)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~ 180 (449)
+..+.++.++.........+.+|.+.+++|.++.++|++.+.+.++..+++++.|+++||+|||+++..+.++.+++..+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~ 87 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAG 87 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566777778888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHH
Q 013144 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI 260 (449)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~ 260 (449)
++++ ++++.++++|+++|++.+...+...+.+.+..++++|+++++++..+.++|..+|+.+++.+.+...|...+ .
T Consensus 88 ~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~-~ 164 (381)
T PRK03633 88 LGLM--VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPW-V 164 (381)
T ss_pred HHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHH-H
Confidence 9998 999999999999999999988988888889999999999999999999999999999999987654333333 2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHH
Q 013144 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (449)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (449)
.+........+ ++. +.++++.+ + + ...++++.+|+|.++......+......
T Consensus 165 ~~~~~~~~~~~-~~~-~~~~~~~~---------------------~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (381)
T PRK03633 165 TGLVLAAILPL-LFT-RILNQQAE---------------------N--H---DSTSIWPMLKLRQARLGVNGCIISGIVL 216 (381)
T ss_pred HHHHHHHHHHH-HHh-cccCCCCC---------------------C--C---CCCCHHHHHHhcchHHHHHHHHHHHHHH
Confidence 22222221111 221 11111100 0 0 0123456788888776655555555556
Q ss_pred HHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.....++|.|+++ .|.++.+++.......++.+++++..|++.||+++|
T Consensus 217 ~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~ 265 (381)
T PRK03633 217 GSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRL 265 (381)
T ss_pred HHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcH
Confidence 6677889999987 599999999998898899999999999999999988
No 59
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.96 E-value=2.8e-27 Score=223.32 Aligned_cols=244 Identities=16% Similarity=0.196 Sum_probs=201.1
Q ss_pred hhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q 013144 116 VVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAM 195 (449)
Q Consensus 116 ~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~ 195 (449)
...++.+|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|||+++.++.++..++.+.+ .. ++++.+++.
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~--~~~~~l~~~ 93 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA--PGTALLFAG 93 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh--ccHHHHHHH
Confidence 567889999999999999999999999999999999999999999999999999999988888877 66 889999999
Q ss_pred HHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh--CchHHHHHHHHHHHHHHHHHH
Q 013144 196 RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA--GIFGPFVIFGLSGFLWVLVWL 273 (449)
Q Consensus 196 r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~ 273 (449)
|++.|++.+...+....++.|++| ++|++++++.+....+|..+++.+++.+.+.. +||+.|.+.++..++.....
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~- 171 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLAW- 171 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH-
Confidence 999999999888888889999996 68999999999999999999999999888765 39999887765544332222
Q ss_pred HhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013144 274 SATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNF 353 (449)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (449)
.|+.+++++. + ++......++.+|+|.++...+..++....++....++|.|+++
T Consensus 172 --~~~~~~~~~~--------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~ 226 (355)
T TIGR00896 172 --IPQVRRRVAA--------------------N---QTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS 226 (355)
T ss_pred --hhhhccccCC--------------------C---CCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222211100 0 00001123467888888887777777777788888999999988
Q ss_pred hhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 354 VYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 354 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.|++..+.+...+...++.++++++.|++.||+++|
T Consensus 227 -~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~ 262 (355)
T TIGR00896 227 -HGASAATAGSLLALMQLAQAASALLIPALARRVKDQ 262 (355)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccc
Confidence 599999999999999999999999999999999654
No 60
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.96 E-value=3.5e-27 Score=227.55 Aligned_cols=285 Identities=16% Similarity=0.115 Sum_probs=216.1
Q ss_pred HHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhh---
Q 013144 107 ALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW--- 183 (449)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~--- 183 (449)
..++..+......+.+|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++.+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~ 104 (417)
T PRK10489 25 ARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAF 104 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHH
Confidence 34555566667788889999999999999999999999999999999999999999999999988888777665432
Q ss_pred ccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHH
Q 013144 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (449)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~ 263 (449)
...++++.+++.|+++|++.+...+...+++.|+.|+++|+++.++.....++|..+||.+++.+.+..||++.|++.++
T Consensus 105 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~ 184 (417)
T PRK10489 105 LPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAA 184 (417)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHH
Confidence 11268899999999999999988899999999999999999999999999999999999999999998999999998777
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHH
Q 013144 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (449)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (449)
..++..++.+ ..|+.++++++.+ +..++....++..+++|.++...+..++.. .....
T Consensus 185 ~~~~~~~~~~-~l~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 242 (417)
T PRK10489 185 GTFITLLPLL-RLPALPPPPQPRE--------------------HPLRSLLAGFRFLLASPVVGGIALLGGLLT-MASAV 242 (417)
T ss_pred HHHHHHHHHH-hCCCCCCCCcccc--------------------cchHHHHHHHHHHHcChHHHHHHHHHHHHH-HHHhH
Confidence 7665554443 3344332211000 000111224556777887766555544433 24566
Q ss_pred HHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhcccch
Q 013144 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSP 422 (449)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (449)
..++|.|+++.+|.++...+++.....++.+++.++.+++.||.+++ ..+..+.+..+++++.+...++.
T Consensus 243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~---------~~l~~~~~~~~~~~~~~~~~~~~ 312 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG---------LLMLLSTLGSFLAVGLFGLMPMW 312 (417)
T ss_pred HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc---------hHHHHHHHHHHHHHHHHHccchH
Confidence 78899999997899999999999999999999999999999875444 23344444445555555444443
No 61
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.96 E-value=9.2e-26 Score=215.81 Aligned_cols=268 Identities=15% Similarity=0.095 Sum_probs=203.5
Q ss_pred hhhhh-hhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q 013144 117 VMSVA-IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAM 195 (449)
Q Consensus 117 ~~~~~-~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~ 195 (449)
...+. .+.+.+++|.+..+.|++.+.+.+...+.+++.|+++||+|||+++..+.++.+++.+++++. ++++.+++.
T Consensus 28 ~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~ 105 (400)
T PRK11646 28 VVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA--HEPWLLWLS 105 (400)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh--ccHHHHHHH
Confidence 33444 445678999999999999999999999999999999999999999999999999999999988 899999999
Q ss_pred HHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHh
Q 013144 196 RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (449)
Q Consensus 196 r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (449)
|+++|++.+...+...+++.|++|+++|++++++.....++|..+||.+++.+. .+|||+.|++.++..++..++..+.
T Consensus 106 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~ 184 (400)
T PRK11646 106 CILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWL 184 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999889999999999999999999999999999999999999999998 6799999999887776655554444
Q ss_pred cCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013144 276 TSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVY 355 (449)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (449)
.|+.++++. +++...++++.+++|.++...+..+...........++|.|+++.
T Consensus 185 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~- 238 (400)
T PRK11646 185 LPAYKLSTV-------------------------RTPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDI- 238 (400)
T ss_pred CCccccccc-------------------------chhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhh-
Confidence 443211100 001123566788898887766655554444444567889999886
Q ss_pred CCcccchhhHhhHHHHHHHHHHHHHHHHHHH-HHHhCCCchhhHHHHHHHHhHHHHHHHHHhhcccch
Q 013144 356 HIDLRQASWFSAVPWSVMAFTGYLGGLLSDM-LIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSP 422 (449)
Q Consensus 356 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (449)
+.++.+.+++.....++...+....+++.|| .+.+ ..+..+.+..+++.+.+...++.
T Consensus 239 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~---------~~~~~~~~~~~~~~~~l~~~~~~ 297 (400)
T PRK11646 239 AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLE---------HRLMAGLLIMSLSMFPIGMVSNL 297 (400)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh---------HHHHHHHHHHHHHHHHHHHhhhH
Confidence 4477788888777777666655555665554 4333 22234444455555555444443
No 62
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.96 E-value=7.1e-26 Score=218.14 Aligned_cols=263 Identities=19% Similarity=0.142 Sum_probs=201.6
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchh-----hHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHH
Q 013144 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSRSF-----SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (449)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i 176 (449)
..++++.++.........+.+|.+.+++|.+..+ .|++.+++.++..++.+++|+++||+|||+++..+.++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 96 (408)
T PRK09874 17 TVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGI 96 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHH
Confidence 3445566667777778888999999999988654 48999999999999999999999999999999999999999
Q ss_pred HHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchH
Q 013144 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (449)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~ 256 (449)
+.+++++. ++++.+++.|++.|++.+ ..+....++.|++|+++|++++++......+|..++|.+++.+.+..|||+
T Consensus 97 ~~~~~~~~--~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 173 (408)
T PRK09874 97 VMVLMGLA--QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRP 173 (408)
T ss_pred HHHHHHHH--hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 99988888 999999999999999865 467788899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHH-HHHHH
Q 013144 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSII-VANAM 335 (449)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 335 (449)
.|++.+++.++..+..++..+++++..++.++. ...+..+.+++++++... ...+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~ 230 (408)
T PRK09874 174 VFFITASVLFLCFLVTLFCIRENFQPVSKKEML-----------------------HMREVVTSLKNPKLVLSLFVTTLI 230 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccccchhhh-----------------------HHHHHHHhCcCCchHHHHHHHHHH
Confidence 999988887776666666555543221110000 001223455666665433 33333
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCccc---chhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 336 HSWGFFVILSWMPIYFNFVYHIDLR---QASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~g~s~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
..........+++.|+.+..+.... ..+.+....+++.+++.+..|++.||++||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~ 288 (408)
T PRK09874 231 IQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE 288 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 4444455667788888775332221 234555666778888899999999999988
No 63
>PRK12382 putative transporter; Provisional
Probab=99.95 E-value=4.6e-26 Score=218.10 Aligned_cols=256 Identities=17% Similarity=0.147 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhh-hhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHH
Q 013144 101 VSMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (449)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~ 179 (449)
+..+.++.++.........+.+|. +.+++|.|+.++|++.+++.++..++++++|+++||+|||++++.+.+...++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 96 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGL 96 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHH
Confidence 334444555666666677777775 5789999999999999999999999999999999999999999999887776654
Q ss_pred Hh---hhc---cchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC
Q 013144 180 LT---PWA---ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (449)
Q Consensus 180 ~~---~~~---~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 253 (449)
.. +.. ..++++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+||++++.+.+..|
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g 176 (392)
T PRK12382 97 AYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFG 176 (392)
T ss_pred HHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 32 221 115889999999999999999899999999999999999999999999999999999999999999899
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHH
Q 013144 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVAN 333 (449)
Q Consensus 254 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (449)
||+.+.+..+..++..... ...|+.++++ +++ .+.++.++ .++...+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------------------------~~~----~~~~~~~~--~~~~~~~~~ 225 (392)
T PRK12382 177 FAALALTTMVLPLLAWAFN-GTVRKVPAHA------------------------GER----PSLWSVVG--LIWKPGLGL 225 (392)
T ss_pred hHHHHHHHHHHHHHHHHHH-HhccCCCCCc------------------------ccC----chHHHHHH--HHHHhHHHH
Confidence 9988776554433322211 1112211100 000 01112221 122222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 334 AMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
++..........+.|.|+++ .|++ ..+.......++.++++++.|++.||+++|
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~ 279 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGV 279 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 33344555667788888877 4665 355666667777889999999999999987
No 64
>TIGR00898 2A0119 cation transport protein.
Probab=99.95 E-value=7.1e-27 Score=231.23 Aligned_cols=282 Identities=16% Similarity=0.113 Sum_probs=205.0
Q ss_pred hhhhhhhhhcCCC---chhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 013144 120 VAIVPLSLAHGWS---RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (449)
Q Consensus 120 ~~~~~l~~~~~~~---~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 196 (449)
+..+.+.+|+|++ ..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++++++ ++++.+++.|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS--PNYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc--ccHHHHHHHH
Confidence 5678899999998 8999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhc
Q 013144 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (449)
Q Consensus 197 ~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 276 (449)
++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+ ||+.|++.+++.++..+.. +..
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-Hhc
Confidence 999999999999999999999999999999999999999999999999877653 9999999988877766655 556
Q ss_pred CCCCCCCC-CCCHHHHHHHHHh----ccCccc-----c--CCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHH
Q 013144 277 SSTPDRHP-QISKYELEYILRE----KQKPLL-----M--GNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVIL 344 (449)
Q Consensus 277 ~~~~~~~~-~~~~~~~~~~~~~----~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (449)
||+|+... +.+.++..+..++ ...... . +++..++.....+++++++|.++...+...+..+......
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 77765321 1112221111111 100000 0 0000011112467789999988777665555444433333
Q ss_pred HHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhccc
Q 013144 345 SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK 420 (449)
Q Consensus 345 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (449)
..++.++.. .+.+. .......++..+++.++.+++.||+||| ..+..+.+..+++++.+...+
T Consensus 344 ~~~~~~~~~-~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr---------~~~~~~~~~~~~~~l~~~~~~ 406 (505)
T TIGR00898 344 YGLVLDLGN-LGGNI---YLDLFISGLVELPAKLITLLLIDRLGRR---------YTMAASLLLAGVALLLLLFVP 406 (505)
T ss_pred HHHhccccc-cCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHcC
Confidence 333333333 34442 2334455677788999999999999988 444555555555555554443
No 65
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.95 E-value=5e-26 Score=216.68 Aligned_cols=283 Identities=13% Similarity=0.042 Sum_probs=219.6
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHH----HHHHHHHHHHHH
Q 013144 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIM----AWGVALWSLATF 179 (449)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l----~~~~~~~~i~~~ 179 (449)
+.+.++..+.......|.+|.+.+++|.|..++|++.+++.+...++++++|+++||+|||... .++..+..+ .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--A 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--H
Confidence 4456666677778888999999999999999999999999999999999999999999985433 222222222 2
Q ss_pred HhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHH
Q 013144 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (449)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~ 259 (449)
.+..+ ++++.+++.|+++|.+.+...|...++..++ +++|+++.|......++|.+++|++++.+.+.+|||..|+
T Consensus 87 ~~~~~--~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~ 162 (382)
T TIGR00902 87 FSAGA--HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILA 162 (382)
T ss_pred HHHhh--hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHH
Confidence 33456 8999999999999999888889988888765 4788999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHH
Q 013144 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWG 339 (449)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (449)
+.++..++. +..+...|+.+++++. + +++.....++++++|+|++|...+..++....
T Consensus 163 ~~~~~~~~~-~~~~~~~~~~~~~~~~-~--------------------~~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~ 220 (382)
T TIGR00902 163 ILTAGLAFM-LIGFLIKPTIPPKDAI-P--------------------EDESQGDSAFIALLKNPMNLRFLAAVCLIQGA 220 (382)
T ss_pred HHHHHHHHH-HHHHHcCCCCCCCccc-c--------------------ccccccchhHHHHHcChHHHHHHHHHHHHHHH
Confidence 876553332 2233333322221110 0 00011123567899999999999888888888
Q ss_pred HHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhcc
Q 013144 340 FFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA 419 (449)
Q Consensus 340 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (449)
......+.|.|+++ .|.++.++|.......++.+++.++.+++.||++.| .++..+.+..++....+.+.
T Consensus 221 ~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~---------~~l~~~~~~~~~~~~~~~~~ 290 (382)
T TIGR00902 221 HAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR---------DLLLISAIACVGRWAIIGAI 290 (382)
T ss_pred HHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH---------HHHHHHHHHHHHHHHHHHhH
Confidence 88899999999988 799999999998888888888999999999999888 45567777777777777666
Q ss_pred cchhH
Q 013144 420 KSPVM 424 (449)
Q Consensus 420 ~~~~~ 424 (449)
++.+.
T Consensus 291 ~~~~~ 295 (382)
T TIGR00902 291 EAFPL 295 (382)
T ss_pred hhHHH
Confidence 65553
No 66
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.95 E-value=7.4e-26 Score=213.22 Aligned_cols=263 Identities=30% Similarity=0.485 Sum_probs=231.8
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhh
Q 013144 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (449)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~ 182 (449)
.+.+..+....+.....+..|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+.+..+.++..++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 44566677788888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHH
Q 013144 183 WAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFG 262 (449)
Q Consensus 183 ~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~ 262 (449)
+. ++++.+++.|++.|++.+...+...+++.|++|+++|++.+++......+|..+++.+++.+.+..+||+.+++.+
T Consensus 83 ~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (352)
T cd06174 83 FA--SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILA 160 (352)
T ss_pred Hh--ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 98 9999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHH
Q 013144 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFV 342 (449)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (449)
+..++..+...+.. |.++...+..++.......
T Consensus 161 ~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~ 193 (352)
T cd06174 161 ILGLLLALLLLFLL-----------------------------------------------RLLLLLALAFFLLSFGYYG 193 (352)
T ss_pred HHHHHHHHHHHHHH-----------------------------------------------HHHHHHHHHHHHHHhHHHH
Confidence 87776665554431 4567777888888888889
Q ss_pred HHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHH-HHHHHhHHHHHHHHHhhcccc
Q 013144 343 ILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKI-LQSIGFIAPGIALIGLTAAKS 421 (449)
Q Consensus 343 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 421 (449)
...+.|.++++.+|.+..+.+.......++.+++.++.+++.||+++| . .+..+.+...++.+.+...++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~~~~~~~~~~ 264 (352)
T cd06174 194 LLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRR---------RLLLLIGLLLAALGLLLLALAPS 264 (352)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---------hHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999997799999999999999999999999999999999988 3 445555566666665555544
Q ss_pred hh
Q 013144 422 PV 423 (449)
Q Consensus 422 ~~ 423 (449)
.+
T Consensus 265 ~~ 266 (352)
T cd06174 265 LA 266 (352)
T ss_pred HH
Confidence 33
No 67
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.95 E-value=7e-25 Score=209.66 Aligned_cols=253 Identities=15% Similarity=0.085 Sum_probs=181.3
Q ss_pred HHHHHHhHhhhhhhhhh-hhhhcCCCchhhHHHHHHHHH-HHHHhhccchhhhhhcCCchHH-HHHHHHHHHHHHHhhhc
Q 013144 108 LALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLW-GYLVSPIAGGTLVDYYGGKIIM-AWGVALWSLATFLTPWA 184 (449)
Q Consensus 108 ~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l-~~~~~~~~i~~~~~~~~ 184 (449)
.++.........+.++. +.+++|.+++++|++.+...+ +..++.++.|+ .||+||||.+ ..+.++.+++..+.+++
T Consensus 24 ~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 102 (393)
T PRK15011 24 AFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWN 102 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHh
Confidence 44444444455555555 678899999999999876655 55566655555 9999999875 45566666777778888
Q ss_pred cchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchh--hHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHH
Q 013144 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTER--ARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFG 262 (449)
Q Consensus 185 ~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r--g~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~ 262 (449)
++++.+++.+.+.|...+...|...+++.|+.++++| +...++...+.++|.++||++++.+.+++|||+.|++.+
T Consensus 103 --~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~ 180 (393)
T PRK15011 103 --RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAA 180 (393)
T ss_pred --hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHH
Confidence 8999887666555544556788889999998876655 345678889999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhcc-ccHHHHHHHHHHHHHHHH
Q 013144 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSK-MPTWSIIVANAMHSWGFF 341 (449)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 341 (449)
+..++..+..++..||.+++++... + + . .. ..++ +..+......+.......
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------~---~----~~---~~~~~~~~~~~~~~~~~~~~~~~ 233 (393)
T PRK15011 181 VAFIVCGVMVWLFLPSMRKELPLAT-G----------------T---L----EA---PRRNRRDTLLLFVICTLMWGTNS 233 (393)
T ss_pred HHHHHHHHHHHhhcCccCCCCcccc-c----------------c---c----cc---cccccccHHHHHHHHHHHHHHHH
Confidence 8877776666666666543221100 0 0 0 00 0112 223333333344444555
Q ss_pred HHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.+..+.|.|+++.+|+++.+++.+.....++.+++.++.|+++||+++|
T Consensus 234 ~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~ 282 (393)
T PRK15011 234 LYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR 282 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 5667899999888899999999888777778888999999999999988
No 68
>PRK10054 putative transporter; Provisional
Probab=99.95 E-value=1.6e-25 Score=213.88 Aligned_cols=277 Identities=15% Similarity=0.091 Sum_probs=209.4
Q ss_pred HHHHHHHHHhHhhhhhhhh-hhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhh
Q 013144 105 ALALALCNADRVVMSVAIV-PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (449)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 183 (449)
....++.........+.++ .+.+++|.+..+.|++.+.+.++..+++++.|+++||+|||++++++.++.+++.++.++
T Consensus 13 ~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~ 92 (395)
T PRK10054 13 LASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL 92 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH
Confidence 3344445555555555554 566789999999999999999999999999999999999999999999999999999988
Q ss_pred ccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHH
Q 013144 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (449)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~ 263 (449)
. ++++.++++|++.|.+.+...+...++..|..|+++|++++++.....++|.++||++++.+.+ .||+..|++.++
T Consensus 93 ~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~ 169 (395)
T PRK10054 93 V--NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAI 169 (395)
T ss_pred H--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHH
Confidence 8 9999999999999988888888899999999999999999999999999999999999999875 699999999887
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHH
Q 013144 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (449)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (449)
+.++..+...+..|+.++++++. + + + ..+.++.+|+|.++...+..++........
T Consensus 170 ~~~i~~i~~~~~~~~~~~~~~~~--~-------------------~--~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 225 (395)
T PRK10054 170 CSAFPLVFIQIWVQRSEKAIATE--T-------------------G--S-VWSPSVLLQDKALLWFTCSGFLASFVSGAF 225 (395)
T ss_pred HHHHHHHHHHHHHhccccccccc--h-------------------h--h-hhhhhhhccCceehHHHHHHHHHHHHHHHh
Confidence 77766555544444332211100 0 0 0 012257788999988887777777666666
Q ss_pred HHHHHHHHHHh--hCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhh
Q 013144 344 LSWMPIYFNFV--YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (449)
Q Consensus 344 ~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (449)
..+.+.|+... .+.+....+.+.....+.........|++.||.++| ..+..++...++....+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~---------~~l~~~~~~~~~~~~~~~ 292 (395)
T PRK10054 226 ASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR---------PLMTAGTLCFVIGLVGFI 292 (395)
T ss_pred hhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch---------hHHHHHHHHHHHHHHHHH
Confidence 66777777543 244555666776666666666677888999998777 333444444444444443
No 69
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.95 E-value=1.7e-25 Score=214.34 Aligned_cols=258 Identities=17% Similarity=0.145 Sum_probs=200.6
Q ss_pred HHHHHhHhhhhhhhhhhhhhcC--CCchhhHHHHHH-----HHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHh
Q 013144 109 ALCNADRVVMSVAIVPLSLAHG--WSRSFSGIVQSS-----FLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (449)
Q Consensus 109 ~~~~~~~~~~~~~~~~l~~~~~--~~~~~~g~~~s~-----~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~ 181 (449)
+.++++...++...+.+.+++. .++.+.+.+.+. ..++..+++++.|+++||+|||+++.++.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4567788888888888877754 456666665553 233334688999999999999999999999999999999
Q ss_pred hhccchhHH--------HHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHH----
Q 013144 182 PWAADTSLL--------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM---- 249 (449)
Q Consensus 182 ~~~~~~~~~--------~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~---- 249 (449)
+++ ++++ .+++.|+++|++.+...+...+++.|++|+++|++..++...+..+|.++++.++..+.
T Consensus 83 ~~~--~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~ 160 (394)
T TIGR00883 83 GLL--PSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLG 160 (394)
T ss_pred hhC--CChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 998 7764 58899999999999999999999999999999999999999999999999999887664
Q ss_pred ----hhhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhcccc
Q 013144 250 ----SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMP 325 (449)
Q Consensus 250 ----~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (449)
+..+||+.|++.+++.++..+. ....+|+++..+ +. .+++....+.++.+++++
T Consensus 161 ~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~----------------~~~~~~~~~~~~~~~~~~ 218 (394)
T TIGR00883 161 DDALLEWGWRIPFLVSAVLVLIGLYL-RRNLEETPVFEK-----AQ----------------EKHKKKRGPIRETLTKHR 218 (394)
T ss_pred HHHhhccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHH-----HH----------------hccccccCCHHHHHHhch
Confidence 3568999998877665544332 223333322110 00 000111234556677665
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 326 --TWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 326 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
++...+..++.....+....+.|.|+++.+|.++.+.+.......++.+++.++.|++.||++||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 285 (394)
T TIGR00883 219 KPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR 285 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 77777777777777888889999999887899999999999999999999999999999999988
No 70
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.95 E-value=2.7e-25 Score=211.80 Aligned_cols=278 Identities=12% Similarity=0.029 Sum_probs=209.7
Q ss_pred HHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCc----hHHHHHHHHHHHHHHHhhh
Q 013144 108 LALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK----IIMAWGVALWSLATFLTPW 183 (449)
Q Consensus 108 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr----~~l~~~~~~~~i~~~~~~~ 183 (449)
++..........+.+|.+.+++|.+..++|++.+++.++..++++++|++.||+||| +.+.+...+. .......
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHh
Confidence 344445556788888999999999999999999999999999999999999999994 3333322222 2223334
Q ss_pred ccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHH
Q 013144 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (449)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~ 263 (449)
. +++|.+++.|++.|++.+...+...+++.++ .++|+++.+......++|.++||++++++.+++|||..|++.++
T Consensus 91 ~--~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~ 166 (382)
T PRK11128 91 A--HSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTA 166 (382)
T ss_pred c--ccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 5 7899999999999999998899888888876 46788889999999999999999999999999999999988776
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHH
Q 013144 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (449)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (449)
..++..+. .+..|+++++.++ + ++.++...++++++|+|.+|...+..++........
T Consensus 167 ~~~~~~~~-~~~~~~~~~~~~~--------------------~-~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~ 224 (382)
T PRK11128 167 GVASMLLG-QLLRPTIMPQGES--------------------R-QQESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAY 224 (382)
T ss_pred HHHHHHHH-HHccCCCCCcccc--------------------c-cccccccchHHHHHcChhHHHHHHHHHHHHHHhHhH
Confidence 54444333 2333332111100 0 000111246789999999998888777777777778
Q ss_pred HHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhcccchh
Q 013144 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPV 423 (449)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (449)
..+.|.|+++ .|.+..+.|.+.....++.++..++.+++.||+++| ..+..+.+..++..+.+...++.+
T Consensus 225 ~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~ 294 (382)
T PRK11128 225 YGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR---------DLLLLSAICGVVRWGLMGSTTALP 294 (382)
T ss_pred HHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH---------HHHHHHHHHHHHHHHHHHhhhhHH
Confidence 8888999977 699998999998888888888899999999999888 344555566666655555555544
No 71
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.95 E-value=5.4e-25 Score=207.92 Aligned_cols=252 Identities=13% Similarity=0.083 Sum_probs=198.3
Q ss_pred hhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhc-----CCchH-HHHHHHHHHHHHHHhhhcc-chh
Q 013144 116 VVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-----GGKII-MAWGVALWSLATFLTPWAA-DTS 188 (449)
Q Consensus 116 ~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~~-l~~~~~~~~i~~~~~~~~~-~~~ 188 (449)
...++..|.+.+|+|+|.+++|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++...+.++.. ..+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 456778899999999999999999766 455555 89999999998 89986 5667777777766666652 146
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC--------chHHHHH
Q 013144 189 LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG--------IFGPFVI 260 (449)
Q Consensus 189 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g--------wr~~f~~ 260 (449)
++.+.+..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+..| ||..|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 66777888888999898899999999999999999999999999999999999999999988888 9999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhcccc---HHHHHHHHHHHH
Q 013144 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMP---TWSIIVANAMHS 337 (449)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 337 (449)
.++..++..+..++..||++++++. ++++. ++...++++++++|. ++...+..++..
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~~~~-~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQEDASV-PKPLT-------------------QAVLKPIREFFQRKNMIQALLLLLLIVLYK 222 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCccccc-chhHH-------------------HHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 8887777665555555553322111 10000 001135667777775 777777777777
Q ss_pred HHHHHHHHHHHHHHHHhhCCcccchhhHhhHHH-HHHHHHHHHHHHHHHHHHHh
Q 013144 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPW-SVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~g~~ 390 (449)
...+....+.|.|+++ +|+++.+.+......+ ++.+++.++++++.||+|+|
T Consensus 223 ~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~ 275 (356)
T TIGR00901 223 LGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL 275 (356)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 8888888999999998 7999999998887766 56788999999999999987
No 72
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.95 E-value=9.8e-25 Score=213.53 Aligned_cols=265 Identities=16% Similarity=0.149 Sum_probs=206.4
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhc-----CCchH-HHHHHHHHHH
Q 013144 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-----GGKII-MAWGVALWSL 176 (449)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~~-l~~~~~~~~i 176 (449)
.+++..+..+.........+|...++.|.+..++|.+ +.....+ ++.+++|+++||+ |||+. ++++.+..++
T Consensus 16 ~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~ 93 (491)
T PRK11010 16 ILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLV 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHH
Confidence 3444455566666688888999999999999999997 3344444 6899999999999 99985 6677777777
Q ss_pred HHHHhhhc-cchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh-hhCc
Q 013144 177 ATFLTPWA-ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QAGI 254 (449)
Q Consensus 177 ~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~-~~gw 254 (449)
+..++++. +.++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+ ..||
T Consensus 94 ~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GW 173 (491)
T PRK11010 94 AIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGW 173 (491)
T ss_pred HHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCH
Confidence 77777665 225788999999999999999999999999999999999999999999999999999999999988 5799
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHH
Q 013144 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (449)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (449)
|..|++.+++.++..+..++ .||+++..+. +++ .++....++++.++++..|...+..+
T Consensus 174 r~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~-~~~-------------------~~~~~~~~l~~~~~~~~~~~~ll~~~ 232 (491)
T PRK11010 174 QGMYWLMAALLIPCIIATLL-APEPTDTIPV-PKT-------------------LEQAVVAPLRDFFGRNNAWLILLLIV 232 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCcccccc-ccc-------------------hhhhHHHHHHHHHcCcCHHHHHHHHH
Confidence 99999988877766554444 4554322110 000 00011235677888888887776666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCcccchhhHhh-HHHHHHHHHHHHHHHHHHHHHHh
Q 013144 335 MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSA-VPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
+..........+.+.|+.+.+|++..+.+.... ...++.+++.+++|+++||+++|
T Consensus 233 l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~ 289 (491)
T PRK11010 233 LYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLF 289 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 666666667778888887778999999999874 55578899999999999999987
No 73
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.94 E-value=4.8e-25 Score=212.96 Aligned_cols=321 Identities=21% Similarity=0.185 Sum_probs=258.5
Q ss_pred chhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHH
Q 013144 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (449)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 173 (449)
..+.|.+.+...+...........++...+.++++++.+..+++|+.++......+..++.+.+.||||.|.+.++|.++
T Consensus 41 GG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v 120 (509)
T KOG2504|consen 41 GGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLV 120 (509)
T ss_pred CCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHH
Confidence 45567888888788887777778888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccchhHHHHHHHH-HHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh
Q 013144 174 WSLATFLTPWAADTSLLALLAMR-AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (449)
Q Consensus 174 ~~i~~~~~~~~~~~~~~~l~~~r-~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 252 (449)
.++|.++.+++ +++|++++.. ++.|+|.|+.+..+..++..|| +|+|+.+.|+..++.++|.++-|.+..++.+.+
T Consensus 121 ~~~g~~lssF~--~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~ 197 (509)
T KOG2504|consen 121 AALGLLLSSFA--TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY 197 (509)
T ss_pred HHHHHHHHHHH--hhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh
Confidence 99999999999 9999887764 8899999999999999999988 699999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHH------------Hhc--cCccc----------cCCCC
Q 013144 253 GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYIL------------REK--QKPLL----------MGNKH 308 (449)
Q Consensus 253 gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~--~~~~~----------~~~~~ 308 (449)
|||+.+++.+.+.+-..+......|..++..+. ..++.+... ... ..... .+..+
T Consensus 198 G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (509)
T KOG2504|consen 198 GWRGALLIFGGISLNVLVAGALLRPLSPPKKPN-EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPD 276 (509)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch-hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCc
Confidence 999999999988877777777777644443222 000000000 000 00000 00000
Q ss_pred CCC--CCchhH----HHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHH
Q 013144 309 KPA--TVIPPF----RRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGL 382 (449)
Q Consensus 309 ~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~ 382 (449)
+.. ...... .+++++|.++.+.+...+...+++....++|.|..+ .|++..+++.++++.++..++++++.|+
T Consensus 277 ~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~ 355 (509)
T KOG2504|consen 277 KWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGL 355 (509)
T ss_pred cccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhh
Confidence 000 111111 478999999999999999999999999999999996 6999999999999999999999999999
Q ss_pred HHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhcccchhHHH
Q 013144 383 LSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMAS 426 (449)
Q Consensus 383 l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (449)
+.|+...+ ++.+..++++..+++.+.....++.+..+
T Consensus 356 laD~~~~~-------~~~~~~~~ll~~gl~~~~~p~~~~~~~l~ 392 (509)
T KOG2504|consen 356 LADKPGIR-------ALVLFLLTLLIAGLARLFLPFATTYVGLI 392 (509)
T ss_pred hcCccccc-------hHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 99998854 24666777788888887777776665333
No 74
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.94 E-value=1.2e-24 Score=210.21 Aligned_cols=288 Identities=17% Similarity=0.151 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHH
Q 013144 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (449)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~ 177 (449)
...+...++.....++.....+..++.+..|+|- .....|+.+.+.++.+++.++.|+++|.||||+.++.+.++..+|
T Consensus 43 i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG 121 (599)
T PF06609_consen 43 IASFAAFSLAVIAAYFVLVLPASILPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVG 121 (599)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhH
Confidence 3344445555555556666667788999999995 577899999999999999999999999999999999999999999
Q ss_pred HHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHH
Q 013144 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGP 257 (449)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~ 257 (449)
.++++.+ +|...++++..+.|+|.|... .....++|..|.|.|+...++.....-+...+++.++..+..+.+|||.
T Consensus 122 ~Iv~atA--~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~ 198 (599)
T PF06609_consen 122 SIVCATA--QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWI 198 (599)
T ss_pred HHHhhcC--CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchH
Confidence 9999999 999999999999999987765 4566689999999999988888777666677888888877767799999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCC---CCCCHHHHHHHHHh-------------------ccC---c-----------
Q 013144 258 FVIFGLSGFLWVLVWLSATSSTPDRH---PQISKYELEYILRE-------------------KQK---P----------- 301 (449)
Q Consensus 258 f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-------------------~~~---~----------- 301 (449)
|++.+++..+.++..+++..++++++ ++.++.+.-+..+- ... .
T Consensus 199 ~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lv 278 (599)
T PF06609_consen 199 FYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLV 278 (599)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHH
Confidence 99998877665554444433222211 11111111111000 000 0
Q ss_pred --------cccCCCC-CCCCCchhHHHhhccc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc---chhhHhhH
Q 013144 302 --------LLMGNKH-KPATVIPPFRRLLSKM-PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLR---QASWFSAV 368 (449)
Q Consensus 302 --------~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~---~~~~~~~~ 368 (449)
+...|.. ..+....|. +++|++ .+...++..++....++....+.|......++-++. ..++...+
T Consensus 279 iG~~~Lv~F~~wE~~~~~~~Pl~P~-~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~ 357 (599)
T PF06609_consen 279 IGFVLLVAFVVWEWFGAPKDPLFPH-RLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSP 357 (599)
T ss_pred HHHHHHHHHHHhhhhccCCCCcCCH-HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhh
Confidence 0111211 112333344 678874 455556677777777888888899988887777653 57788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 013144 369 PWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 369 ~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.+.+..++..+.|.+..++++-
T Consensus 358 ~~fg~~~g~~i~g~l~~~ir~~ 379 (599)
T PF06609_consen 358 VGFGSCAGAVILGLLFSKIRHI 379 (599)
T ss_pred HHHHHHHHHHHHHHHHHHccch
Confidence 8888899999999999888755
No 75
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.94 E-value=2.8e-24 Score=199.58 Aligned_cols=313 Identities=11% Similarity=0.033 Sum_probs=223.7
Q ss_pred hHhhhhhhhhhhhhhcCCCchh-hHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHH
Q 013144 114 DRVVMSVAIVPLSLAHGWSRSF-SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLAL 192 (449)
Q Consensus 114 ~~~~~~~~~~~l~~~~~~~~~~-~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l 192 (449)
-+...+.+.|.+.+++|+|+.+ .|.+.+++..+++++.++.|+++||+|.|+++.++.+.+++.+++.+++ +++..+
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa--~Sl~~L 118 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG--TSVWHM 118 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--HHHHHH
Confidence 3667788899999999999999 9999999999999999999999999999999999999999999999999 999999
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHH--HHHHHHHHH
Q 013144 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIF--GLSGFLWVL 270 (449)
Q Consensus 193 ~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~--~~~~~~~~~ 270 (449)
.+.|++.|++.|... +...++..|+|+++|+++.++..++..+|.++++++++. ...+|||+-+... .+.+....+
T Consensus 119 ~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~ 196 (511)
T TIGR00806 119 QLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSV 196 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHH
Confidence 999999999999988 999999999999999999999999999999999999999 5568999866553 223333444
Q ss_pred HHHHhcCCCCCCCCCCCHHHHH-H---HHHhccCccccCCCC-CC-------CCCchhHHHhhccccHHHHHHHHHHHHH
Q 013144 271 VWLSATSSTPDRHPQISKYELE-Y---ILREKQKPLLMGNKH-KP-------ATVIPPFRRLLSKMPTWSIIVANAMHSW 338 (449)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (449)
++.+++|.+++..-..++++.+ . ..+...........+ .+ ...+..++...+||.+....+-..+...
T Consensus 197 ~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~ 276 (511)
T TIGR00806 197 FLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSA 276 (511)
T ss_pred HHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhh
Confidence 4455556433321000000000 0 000000000000000 00 0123345666788999999999989888
Q ss_pred HHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhc
Q 013144 339 GFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA 418 (449)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (449)
+++.+.+|......+..+-....-|.+-++..+.+.+..+..|++-.++.+- ....+.+..++.+..++++..
T Consensus 277 g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~-------~~l~l~v~s~~~~gll~~m~~ 349 (511)
T TIGR00806 277 GYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW-------SKLLIAVVSAIQAGLVFWMSQ 349 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh-------HHHHHHHHHHHHHHHhhhhhc
Confidence 9988888888877765332222345566666667777788888874444222 235555666666777777777
Q ss_pred ccchhHHHHHHHHHHHhhh
Q 013144 419 AKSPVMASAWLTLAIGMKS 437 (449)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~ 437 (449)
.++.|......++.-..+.
T Consensus 350 t~~Iw~~Y~~yvlf~~~y~ 368 (511)
T TIGR00806 350 SHDIWVLYVTYVLFRGIYQ 368 (511)
T ss_pred ccchHHHHHHHHHHHHHHH
Confidence 7777755444444433333
No 76
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=3.8e-25 Score=218.12 Aligned_cols=306 Identities=18% Similarity=0.121 Sum_probs=218.8
Q ss_pred HHHHHHHHHHHHHHHHh--Hhhhhhhhhhhhhhc-----CCCc--hhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHH
Q 013144 98 VKVVSMLALALALCNAD--RVVMSVAIVPLSLAH-----GWSR--SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMA 168 (449)
Q Consensus 98 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~-----~~~~--~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~ 168 (449)
........+..+..+++ ....+++...+.++. ..+. .+.+|+.+...++..+++++.|+++|++|||+.++
T Consensus 44 ~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~ 123 (513)
T KOG0254|consen 44 ILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLL 123 (513)
T ss_pred HHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 34444445555555554 455566666666532 2222 35599999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHH
Q 013144 169 WGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (449)
Q Consensus 169 ~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l 248 (449)
++.+++.++.++++++ +|+++++++|+++|+|.|......+.+++|..|++.||...+..+....+|..++..++...
T Consensus 124 ~~~~~~~iG~ii~~~a--~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~ 201 (513)
T KOG0254|consen 124 LAVVLFLIGAIIIALA--PSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGT 201 (513)
T ss_pred HHHHHHHHHHHHHHHh--hhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999 99999999999999999999999999999999999999999999999999999996655554
Q ss_pred Hhh-hCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhccC--ccccC-----------CCCCCCCC
Q 013144 249 MSQ-AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQ-ISKYELEYILREKQK--PLLMG-----------NKHKPATV 313 (449)
Q Consensus 249 ~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~-----------~~~~~~~~ 313 (449)
.+. .+||..+.+..+.+++..+. .+..||+|+.--+ .+.++.+........ ..... .+......
T Consensus 202 ~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (513)
T KOG0254|consen 202 SKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEG 280 (513)
T ss_pred ccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccc
Confidence 332 48999999999988888887 7777888865322 222222222221111 00000 00000000
Q ss_pred chhHHHhh----ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHH
Q 013144 314 IPPFRRLL----SKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (449)
Q Consensus 314 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 389 (449)
...+++++ +++.++.+.+..+.+..+.+....|.+.+++.. |.+... .......++...++.+++.++.||+||
T Consensus 281 ~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~-g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gR 358 (513)
T KOG0254|consen 281 KASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA-GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGR 358 (513)
T ss_pred cccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 00122333 233455667777777777788888999998885 766443 555566777788888889999999999
Q ss_pred hCCCchhhHHHHHHHHhHHHHHHHHHhh
Q 013144 390 RGTSVTLTRKILQSIGFIAPGIALIGLT 417 (449)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (449)
| .+++.+...+.++.+++.
T Consensus 359 r---------~lll~s~~~m~~~~~~~~ 377 (513)
T KOG0254|consen 359 R---------KLLLFGAAGMSICLVILA 377 (513)
T ss_pred H---------HHHHHhHHHHHHHHHHHH
Confidence 8 566666666666555443
No 77
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=1.4e-23 Score=188.45 Aligned_cols=269 Identities=16% Similarity=0.159 Sum_probs=227.7
Q ss_pred HHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHH
Q 013144 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT 178 (449)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~ 178 (449)
..+..+....++.++......+.+|.+++.++++..+++++...+..++.+.+++.|++.+|+|+|+.+++++.++++++
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGA 92 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 45566677777888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhc-cchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh------
Q 013144 179 FLTPWA-ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ------ 251 (449)
Q Consensus 179 ~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~------ 251 (449)
.+..-+ ...+|..++++-++.|.|.+...+.++.+++...++++-.+-+++.+.+.++|.++||++++.+..+
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 987422 2278999999999999999999999999999999998889999999999999999999999998762
Q ss_pred -------------hCchHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhH
Q 013144 252 -------------AGIFGPFVIFGLSGFLWVLVWLSAT-SSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPF 317 (449)
Q Consensus 252 -------------~gwr~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (449)
-.|+++|...+...++..+...... |+.++..+ +..+......
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~-----------------------~~~~~~~~~~ 229 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAP-----------------------SLGASGSAGL 229 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccc-----------------------cccccccchH
Confidence 1388888887777666555444432 22221110 0111111145
Q ss_pred HHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 318 RRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.+++++|+++...+..+++-.....+..|++.|+.+..|.+..++....+.++.+.++|++++.++..|+...
T Consensus 230 ~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~ 302 (422)
T COG0738 230 SSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE 302 (422)
T ss_pred HHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 6899999999999999999999999999999999997799999999999999999999999999999998776
No 78
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=7.6e-26 Score=201.33 Aligned_cols=264 Identities=20% Similarity=0.164 Sum_probs=224.2
Q ss_pred hhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhh
Q 013144 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (449)
Q Consensus 126 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 205 (449)
..+++-.++++|++.+.+.+.+.+.+++.|.+.||+|+|-.+++|++++...++++++. ++|+.++++|.+||+|.+.
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg--~sy~~l~vAR~LQgvgsA~ 175 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG--NSYPMLFVARSLQGVGSAF 175 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc--chhHHHHHHHHHhhhhHHH
Confidence 34456788999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhHHHHHHhhccCcch-hhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 013144 206 ALPAMNNMVARWFPQTE-RARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP 284 (449)
Q Consensus 206 ~~~~~~~~i~~~~~~~~-rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (449)
.++.+.++++|.+|+++ |++++|+...+.++|..+||+.||.+.+..|.+.+|++.+++.++-..+.++..++...+..
T Consensus 176 ~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~ 255 (464)
T KOG3764|consen 176 ADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD 255 (464)
T ss_pred HHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc
Confidence 99999999999998654 89999999999999999999999999999999999999999999988887777654333211
Q ss_pred CCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhh
Q 013144 285 QISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASW 364 (449)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 364 (449)
......++++++++|.++.........+.......-.++.++.+.+..+..+.|.
T Consensus 256 -------------------------~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~ 310 (464)
T KOG3764|consen 256 -------------------------STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGL 310 (464)
T ss_pred -------------------------ccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceee
Confidence 1112236779999999998888777777777777788889888887755558999
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhcccchh
Q 013144 365 FSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPV 423 (449)
Q Consensus 365 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (449)
.+....+...++..+.|.+.||++.- |......+++..+++.....+.++..
T Consensus 311 ~fLp~~~~y~ig~~lfg~la~k~~~~-------~wl~~~~gl~~~G~~~~~iP~~~~~~ 362 (464)
T KOG3764|consen 311 AFLPASLSYAIGTNLFGKLADKYPHL-------RWLLSLGGLATVGVSSGPIPFATSIA 362 (464)
T ss_pred eecccccchhccCchHHHHHHhcCch-------hHHHHHHHHHHHHHHhchhHhhhhHH
Confidence 99999999999999999999999854 23455566666666666655554443
No 79
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.94 E-value=9.7e-24 Score=202.47 Aligned_cols=264 Identities=11% Similarity=0.047 Sum_probs=204.2
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhc-----CCch-HHHHHHHHHHHH
Q 013144 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-----GGKI-IMAWGVALWSLA 177 (449)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~-~l~~~~~~~~i~ 177 (449)
....++..+.........+|.+.++.|++.+++|++..+... .+..+++|+++||+ |||| .+.++.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 344556667777788888999999999999999999777765 69999999999999 8876 788888888888
Q ss_pred HHHhhhcc-chhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh-hCch
Q 013144 178 TFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-AGIF 255 (449)
Q Consensus 178 ~~~~~~~~-~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr 255 (449)
..+.++.+ ..+++.+++..++.++..+...++..+++.|++|+++|+++.++...+..+|.++++.+++.+.+. .|||
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 77777762 245788888888889888999999999999999999999999999999999999999999999885 5999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHH
Q 013144 256 GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAM 335 (449)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (449)
..|++.+++.++..+.. +..||+++..++.+ +. +++...++++++|+|.++...+..++
T Consensus 162 ~~f~i~a~~~l~~~l~~-~~~~e~~~~~~~~~-~~-------------------~~~~~~~~~~l~~~~~~~~~l~~~~l 220 (402)
T PRK11902 162 NTYLLMAGLMLAGALTT-LWAPEPEVPARPPR-SL-------------------GEAVVGPLRDFFSRRGAWALLLLIVL 220 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HhcCCCcccccccc-hh-------------------HHHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 99999888776554443 34454432211100 00 00122367789999998887776666
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHH-HHHHHHHHHHHHHHHHHHh
Q 013144 336 HSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWS-VMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~ 390 (449)
..........+.+.++.+.+|+++.+.+++....+. +.+++.++++++.||+++|
T Consensus 221 ~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~ 276 (402)
T PRK11902 221 YKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY 276 (402)
T ss_pred HHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 655544444455566767689999999988766554 5788999999999999987
No 80
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.93 E-value=2.3e-24 Score=233.73 Aligned_cols=258 Identities=17% Similarity=0.148 Sum_probs=196.4
Q ss_pred hhhhhhhhhhhhhcCCCc--hhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHh---hhccchhHH
Q 013144 116 VVMSVAIVPLSLAHGWSR--SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT---PWAADTSLL 190 (449)
Q Consensus 116 ~~~~~~~~~l~~~~~~~~--~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~---~~~~~~~~~ 190 (449)
.....+.+.+..+++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++..++.++. ... ++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~--~~~~ 104 (1146)
T PRK08633 27 GHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYL--GWFW 104 (1146)
T ss_pred HHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHH--ccHH
Confidence 344445555666666554 457999999999999999999999999999999999887766655543 334 6899
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh--------h-CchHHHHHH
Q 013144 191 ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ--------A-GIFGPFVIF 261 (449)
Q Consensus 191 ~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~--------~-gwr~~f~~~ 261 (449)
.++++|+++|++.+...++..+++.|++|+++|++++++...+..+|.++|+++++++.+. + +|++.+.+.
T Consensus 105 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 184 (1146)
T PRK08633 105 LAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLV 184 (1146)
T ss_pred HHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876 2 345555444
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHH
Q 013144 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (449)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (449)
++...+..++..+..|+.++......+.+ .....+.....++.++++|.++...+..++......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 249 (1146)
T PRK08633 185 LLAVAVLGLIFAYRLPKVPAAAPEVFDKK---------------KYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQ 249 (1146)
T ss_pred HHHHHHHHHHHHhcCcCCCCCCccccccc---------------ccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 44333333333444455543322110000 000011122356678888888888777777777777
Q ss_pred HHHHHHHHHHHHhhCCccc-chhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 342 VILSWMPIYFNFVYHIDLR-QASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
....++|.|+.+.+|++.. ..+++.+...++.+++.++.+++.||++++
T Consensus 250 ~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~ 299 (1146)
T PRK08633 250 LAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL 299 (1146)
T ss_pred HHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc
Confidence 7888999999998999998 899999999999999999999999998876
No 81
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.93 E-value=2.1e-23 Score=184.38 Aligned_cols=285 Identities=16% Similarity=0.219 Sum_probs=234.7
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHH
Q 013144 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (449)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~ 177 (449)
+..+..+.+..+----.....++.++.+++|+|++.+..|+++++..++..+.+++..++..|+|.++.+..++++.++|
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 44444444444444455678889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh-CchH
Q 013144 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-GIFG 256 (449)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~ 256 (449)
..+-.. .+.+.++.+-.+.|.|.+......+.++.+.|| |+-+..+|++++..++|..+++.+...+.++. |||.
T Consensus 91 ~~iR~~---~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~ 166 (395)
T COG2807 91 ILIRSL---GGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRG 166 (395)
T ss_pred HHHHhc---ccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHH
Confidence 998765 377888999999999999999999999999996 78899999999999999999999999998887 7999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHH
Q 013144 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (449)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (449)
...+.+.++++.+++++.-..+.. .. ..+....+-..++|+|..|.+.+.+.++
T Consensus 167 aL~~WAl~allAl~~WlPq~~r~~--~~------------------------~~~~~~~~~~~vw~~~~aW~vtLfmGlq 220 (395)
T COG2807 167 ALGFWALLALLALLIWLPQALREQ--AA------------------------SIATKLVSVRKVWRSPLAWQVTLFMGLQ 220 (395)
T ss_pred HHHHHHHHHHHHHHHHhhhccccc--cc------------------------ccccccccccccccCchhHHHHHHHHhh
Confidence 999999999998887776531110 00 0000111223689999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHh
Q 013144 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (449)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (449)
+..+|....|+|.++.|. |+|+.++|.+.+...+.+++..+....+.+|...+ +.+.......+.++.+.+
T Consensus 221 S~~~Y~~~~WLP~ili~~-G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~--------r~~~~~~~~~~l~G~~G~ 291 (395)
T COG2807 221 SLLYYIVIGWLPAILIDR-GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQ--------RPLVVLALLLMLVGLVGL 291 (395)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccc--------chHHHHHHHHHHHHHHHH
Confidence 999999999999999995 99999999999999999999999999999986554 234444444445555555
Q ss_pred hcccc
Q 013144 417 TAAKS 421 (449)
Q Consensus 417 ~~~~~ 421 (449)
.+.+.
T Consensus 292 ~~~P~ 296 (395)
T COG2807 292 LLAPG 296 (395)
T ss_pred HHhhh
Confidence 44433
No 82
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.93 E-value=4e-24 Score=231.13 Aligned_cols=269 Identities=16% Similarity=0.094 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHHhHhhhhhhh-hhhhhhcCCCc-hhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHH---HHHHHHH
Q 013144 102 SMLALALALCNADRVVMSVAI-VPLSLAHGWSR-SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAW---GVALWSL 176 (449)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~-~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~---~~~~~~i 176 (449)
...++..+..++....+.... ..+..+.+.+. ...++..+++.+++.++++++|+++||+|||+++.. +.++..+
T Consensus 18 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~ 97 (1140)
T PRK06814 18 WTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAA 97 (1140)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHH
Confidence 334444444444444433332 23444444332 457888999999999999999999999999997633 2223333
Q ss_pred HHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchH
Q 013144 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (449)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~ 256 (449)
..+++... +++++++++|+++|++.+...|+..+++.+++|+++|++++|+.+++.++|.++||++++++....||++
T Consensus 98 ~~~~~~~~--~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~ 175 (1140)
T PRK06814 98 LAIYGFHL--NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVI 175 (1140)
T ss_pred HHHHHHHH--hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 33334445 7999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHH
Q 013144 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (449)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (449)
.|+..++..++..++.++ .++.+...+...... ...+.....++.+.++|.++...+..++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (1140)
T PRK06814 176 LVALLMGIAVLGWLASLF-IPKTGNAAPDLKIDR-----------------NIIRSTITLLKYAKADKRIWLAILGISWF 237 (1140)
T ss_pred HHHHHHHHHHHHHHHHhh-CCCCCCCCCCCeecc-----------------chHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 995555555544444433 444332211110000 00001123567888999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
++....+..++|.|+++.+|.++...+++.+..+++.+++.++.|+++++..++
T Consensus 238 ~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~ 291 (1140)
T PRK06814 238 WLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITL 291 (1140)
T ss_pred HHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceee
Confidence 888888889999999998999999999999999999999999999999876655
No 83
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.93 E-value=2.8e-23 Score=199.07 Aligned_cols=293 Identities=13% Similarity=0.060 Sum_probs=205.8
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhh-hhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHh
Q 013144 103 MLALALALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (449)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~ 181 (449)
.+....++.+.....+.+.+|.. .+++|.++.+.|++.+++.++..+++++.|+++||+|||+.++.++...+++....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 85 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPF 85 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 34445555666666666676664 56789999999999999999999999999999999999999988777666544322
Q ss_pred ---hhcc---chhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCch
Q 013144 182 ---PWAA---DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (449)
Q Consensus 182 ---~~~~---~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr 255 (449)
.+.+ .+.+..+++.+++.|++.+...+....+..|.. ++++..++......++|.++||.+++.+.+ .+||
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~ 162 (396)
T TIGR00882 86 FIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQ 162 (396)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCch
Confidence 1120 023444567789999998888888888877754 344567788888889999999999998865 5999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHH
Q 013144 256 GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAM 335 (449)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (449)
+.|++.+++.++..++.+...|++|++++ .+. .. +.++++....+.++++|+|.++...+..++
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~----~~------~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 226 (396)
T TIGR00882 163 IVFWLGSGFALILMLLLMFAKPKAPSSAT------VAN----AL------GANASAFSLKLALELFRQRKFWMFVLYVVG 226 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCchhhh------hhc----cc------ccccCCCCHHHHHHHHcCCcHHHHHHHHHH
Confidence 99999888887766665554444332110 000 00 001112223467789999998877776666
Q ss_pred HHHHHHHHHHHHHHHHHHhh---CCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHH
Q 013144 336 HSWGFFVILSWMPIYFNFVY---HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIA 412 (449)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (449)
....+.....+.+.|+++.+ +.+....+.......+..+++.+..+++.||+++| ..+.++.+..++.
T Consensus 227 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~---------~~l~~~~~l~~l~ 297 (396)
T TIGR00882 227 VACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK---------NALLIAGTIMSVR 297 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---------hhHHHHHHHHHHH
Confidence 66666666677888888764 44555678888888888888999999999999988 2334444444444
Q ss_pred HHHhhcccchh
Q 013144 413 LIGLTAAKSPV 423 (449)
Q Consensus 413 ~~~~~~~~~~~ 423 (449)
.......++.+
T Consensus 298 ~~~~~~~~~~~ 308 (396)
T TIGR00882 298 IIGSSFATTAL 308 (396)
T ss_pred HHHHHhcCChH
Confidence 44444444444
No 84
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=2.6e-23 Score=182.94 Aligned_cols=340 Identities=15% Similarity=0.100 Sum_probs=246.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHH
Q 013144 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (449)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 172 (449)
..+.+|........+.....+.....+.+.|.+.+..|.+..+..++......+..+++..+|.++|++|||+.+.+..+
T Consensus 72 fgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l 151 (528)
T KOG0253|consen 72 FGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFL 151 (528)
T ss_pred cccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHH
Confidence 45667888888888888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh
Q 013144 173 LWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (449)
Q Consensus 173 ~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 252 (449)
..++..++.+.+ +|+..+.+.|.+.|+|.|+ .|...++-.|..|..+|+..+-.. ..+.+|.++...+...++.++
T Consensus 152 ~t~v~~~is~~s--pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~ 227 (528)
T KOG0253|consen 152 VTGVFGVISGAS--PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF 227 (528)
T ss_pred HHHHHHHhhcCC--CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999 9999999999999999999 999999999999999999888777 999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhcCCCCCCC-CCCCHHH----HHHHHHhccCcccc-----------C---------CC
Q 013144 253 GIFGPFVIFGLSGFLWVLVWLSATSSTPDRH-PQISKYE----LEYILREKQKPLLM-----------G---------NK 307 (449)
Q Consensus 253 gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~-----------~---------~~ 307 (449)
||||.......+..+.+.+.+ ..||+|+-. .+.++.+ .+++.+.+++.... + ..
T Consensus 228 gwr~~l~~~~~pl~~~a~f~~-w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~ 306 (528)
T KOG0253|consen 228 GWRYLLFTSSTPLMFAARFLV-WVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKS 306 (528)
T ss_pred hHHHHHHHHHhHHHHHHHHHh-hcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhh
Confidence 999998888766555555444 456666532 2222222 22222222221100 0 00
Q ss_pred CCCCCCchhHHHhhcc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CC---------------ccc-chhhH-
Q 013144 308 HKPATVIPPFRRLLSK---MPTWSIIVANAMHSWGFFVILSWMPIYFNFVY--HI---------------DLR-QASWF- 365 (449)
Q Consensus 308 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~---------------s~~-~~~~~- 365 (449)
...+........++.. +.........+...+.+++........++... +. ... ...+.
T Consensus 307 ~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrd 386 (528)
T KOG0253|consen 307 SAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRD 386 (528)
T ss_pred ccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHH
Confidence 1112233344444422 22333444455555556655544444444321 00 000 11111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhcccchhHHHHHHHHHHHhhhhccccccc
Q 013144 366 SAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLV 445 (449)
Q Consensus 366 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (449)
..+..+....|.++.+++.||+||| ..+...++..+++++.+....+......+++.+-++...++...++
T Consensus 387 llitslaefPGlLIt~~iverlGRK---------kTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYv 457 (528)
T KOG0253|consen 387 LLITSLAEFPGLLITGVIVERLGRK---------KTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYV 457 (528)
T ss_pred HHHHHHhhCCchhHHHHHHHHhcch---------hHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEE
Confidence 3345667788999999999999999 5667777888888887777766666666777776676666666665
Q ss_pred c
Q 013144 446 N 446 (449)
Q Consensus 446 ~ 446 (449)
+
T Consensus 458 Y 458 (528)
T KOG0253|consen 458 Y 458 (528)
T ss_pred e
Confidence 4
No 85
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=9.6e-24 Score=199.00 Aligned_cols=309 Identities=18% Similarity=0.146 Sum_probs=222.4
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhhhhhhhh--------hhcC--CCch----hhHHHHHHHHHHHHHhhccchhhhhhcCC
Q 013144 98 VKVVSMLALALALCNADRVVMSVAIVPLS--------LAHG--WSRS----FSGIVQSSFLWGYLVSPIAGGTLVDYYGG 163 (449)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~~~~--~~~~----~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr 163 (449)
........++.+-.++....+++..+.+. +++| .++. ..+.+.+.+.+|.++|++..|.++||+||
T Consensus 10 ~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GR 89 (485)
T KOG0569|consen 10 LLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGR 89 (485)
T ss_pred HHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 33444455555666666666666554443 3345 3433 34677889999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHH
Q 013144 164 KIIMAWGVALWSLATFLTPWA-ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGL 242 (449)
Q Consensus 164 r~~l~~~~~~~~i~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~ 242 (449)
|..++++.++..++.++..++ ..+++.+++++|++.|+..|......+.++.|..|.+.||....+.+.+..+|..++.
T Consensus 90 K~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~ 169 (485)
T KOG0569|consen 90 KNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQ 169 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHH
Confidence 999999999888887776554 1278999999999999999999999999999999999999999999999999999997
Q ss_pred HHHHH--HHhhhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCC--CCCCHHHHHHHHHhccCc-----------cccCCC
Q 013144 243 VLSPI--LMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRH--PQISKYELEYILREKQKP-----------LLMGNK 307 (449)
Q Consensus 243 ~l~~~--l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-----------~~~~~~ 307 (449)
.++.- +.+...|++.+.+..+++++..+.. ...||+|+.- ++.+.+++.+..+.-... ...+++
T Consensus 170 ~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l-~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~ 248 (485)
T KOG0569|consen 170 VLGLPSLLGTEDLWPYLLAFPLIPALLQLALL-PFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEE 248 (485)
T ss_pred HHccHHhcCCCcchHHHHHHHHHHHHHHHHHH-hcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHh
Confidence 76633 3344569999998888877766554 4568888642 233333333322211100 000111
Q ss_pred CCCCCCchhHHHhhccccHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHH
Q 013144 308 HKPATVIPPFRRLLSKMPTWS-----IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGL 382 (449)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~ 382 (449)
+..+....++++++++|.... +.+....+..+.+....|...++++. |++..++.+.....++...+.++++.+
T Consensus 249 ~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~a-G~~~~~a~~an~~~g~v~~~~t~~~~~ 327 (485)
T KOG0569|consen 249 ELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTA-GFTPEEAQYANLGIGIVNLLSTLVSPF 327 (485)
T ss_pred ccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122224456778888765433 33444445556677788888888884 999999999999999999999999999
Q ss_pred HHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhh
Q 013144 383 LSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (449)
Q Consensus 383 l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (449)
+.||.||| .+++.+..++.+..+.+.
T Consensus 328 lid~~gRR---------pLll~~~~~~~~~~~~~~ 353 (485)
T KOG0569|consen 328 LIDRLGRR---------PLLLISLSLMAVALLLMS 353 (485)
T ss_pred HHHhcCCc---------HHHHHHHHHHHHHHHHHH
Confidence 99999999 555655555555554443
No 86
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.93 E-value=1.6e-23 Score=203.32 Aligned_cols=300 Identities=19% Similarity=0.158 Sum_probs=235.2
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHH
Q 013144 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (449)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~ 179 (449)
.+..++.+.+++.+...+.....+.+..++.-|+...+++.++..+...+.++++|.++||++||++++.+-++.++..+
T Consensus 11 ~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~ 90 (524)
T PF05977_consen 11 NFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVAL 90 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH
Confidence 45556777788888888888888888888888999999999999999999999999999999999999999988776655
Q ss_pred Hhhhc---cchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchH
Q 013144 180 LTPWA---ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (449)
Q Consensus 180 ~~~~~---~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~ 256 (449)
+.++. ...+.+.+++.-++.|++.+...|+.++++.|..|+++...+.++.+...++..++||.++|.+...+|-.+
T Consensus 91 ~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~ 170 (524)
T PF05977_consen 91 LLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAA 170 (524)
T ss_pred HHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 44332 225789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHH
Q 013144 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (449)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (449)
.|.+.++..++.++......++.+++ +..++ +..+..+..++.+.++|.+....+..++.
T Consensus 171 ~f~inalsfl~~i~~l~~~~~~~~~~--~~~~e------------------~~~~~l~~G~ryv~~~~~l~~~l~~~~~~ 230 (524)
T PF05977_consen 171 AFLINALSFLISILALLRWKPPPPPS--SLPRE------------------RFFSALREGLRYVRSSPPLRSVLLRSFLF 230 (524)
T ss_pred HHHHHHHHHHHHHHHHHHcccccccc--ccchh------------------hhhhhHHHHHHHHhcchHHHHHHHHHHHH
Confidence 99998776555444433332222111 11111 01112234566666677777666666666
Q ss_pred HHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHh
Q 013144 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (449)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (449)
++....+...+|.+.++.+|.++...|++.+..++|.++|.++.+++.+|++++ .++..+.+..+++++.+
T Consensus 231 ~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~---------~lv~~~~~~~a~~~~~l 301 (524)
T PF05977_consen 231 NLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR---------RLVLLASLLFALALLLL 301 (524)
T ss_pred HHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc---------hhhHHHHHHHHHHHHHH
Confidence 666666777899999999999999999999999999999999999988887765 34456666777777777
Q ss_pred hcccchhHHHHH
Q 013144 417 TAAKSPVMASAW 428 (449)
Q Consensus 417 ~~~~~~~~~~~~ 428 (449)
.+.++.+.....
T Consensus 302 al~~~~~~~~~~ 313 (524)
T PF05977_consen 302 ALSPSFWLALIA 313 (524)
T ss_pred hcchHHHHHHHH
Confidence 777666644333
No 87
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.92 E-value=3.7e-23 Score=199.71 Aligned_cols=289 Identities=13% Similarity=0.043 Sum_probs=186.5
Q ss_pred HHHHHHHhHhhhhhhhh-hhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhh-c
Q 013144 107 ALALCNADRVVMSVAIV-PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW-A 184 (449)
Q Consensus 107 ~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~-~ 184 (449)
..++.........+.++ .+.+++|+++.+.|++.+++.++..++++++|+++||+|||++++++..+.+++...... .
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~ 97 (420)
T PRK09528 18 FFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYV 97 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH
Confidence 33444443344444444 456669999999999999999999999999999999999999998877666555432211 1
Q ss_pred cch-----hHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHH
Q 013144 185 ADT-----SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (449)
Q Consensus 185 ~~~-----~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~ 259 (449)
..+ .+...++++++.|.+.....+....+..+ . .++++..++......++|..++|++++.+.+ .+|++.|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~ 174 (420)
T PRK09528 98 FAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFW 174 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHH
Confidence 001 11112233444444333333333343322 2 3567788899999999999999999999876 48999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHH
Q 013144 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWG 339 (449)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (449)
+.++++++..++.++..++++++.... +++ ++++++....+.++.+|+|.++...+..+.....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------------~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~ 238 (420)
T PRK09528 175 LGSGSALILLVLLFFAKPDAPSTAKVA-NAL---------------GANASAVSLKDALALLKLPKFWFLVLYVIGVACF 238 (420)
T ss_pred HHHHHHHHHHHHHhcccccccchhhhc-cch---------------hcccccccHHHHHHHccCCCeEeehHHHHHHHHH
Confidence 988877766666555544433221100 000 0011112234556788899887766655555555
Q ss_pred HHHHHHHHHHHHHHhh---CCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHh
Q 013144 340 FFVILSWMPIYFNFVY---HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (449)
Q Consensus 340 ~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (449)
......+.|.|+.+.+ +.+..+.+.+.+...++.+++.++.|++.||+++| ..+..+.++.++..++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~---------~~~~~~~~l~~~~~~l~ 309 (420)
T PRK09528 239 YDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAK---------NALLLAGTIMAVRIIGS 309 (420)
T ss_pred HHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc---------hhhHHHHHHHHHHHHHH
Confidence 5556667788777643 45556778888888888999999999999999998 23344444445555555
Q ss_pred hcccchh
Q 013144 417 TAAKSPV 423 (449)
Q Consensus 417 ~~~~~~~ 423 (449)
.+.++.+
T Consensus 310 ~~~~~~~ 316 (420)
T PRK09528 310 GFATGPL 316 (420)
T ss_pred HhcccHH
Confidence 5555544
No 88
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.91 E-value=1.1e-21 Score=191.15 Aligned_cols=162 Identities=15% Similarity=0.176 Sum_probs=138.0
Q ss_pred HHHHHHHHHHHHHhHhhhh-hhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhh-cCCchHHHHHHHHHHHHH
Q 013144 101 VSMLALALALCNADRVVMS-VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLAT 178 (449)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~i~~ 178 (449)
+..+++..+...+..+... .....+.+++|.+..+.+++.+.+.....+..+++|+++|| +|||++++++.+++.++.
T Consensus 16 ~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~ 95 (489)
T PRK10207 16 FFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGY 95 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHH
Confidence 4444445555555544444 45556678899999999999999999999999999999999 999999999999999999
Q ss_pred HHhhhccchhHH-HHHHHHHHHhhhhhhhhhHHHHHHhhccCcc--hhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCch
Q 013144 179 FLTPWAADTSLL-ALLAMRAVVGLAEGVALPAMNNMVARWFPQT--ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (449)
Q Consensus 179 ~~~~~~~~~~~~-~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~--~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr 255 (449)
++++++ ++.. .++++|+++|+|.|...+...+++.|.+|++ +|+.++++++.+.++|.++||.+++++.+++|||
T Consensus 96 ~~~~~~--~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~ 173 (489)
T PRK10207 96 FMTGMS--LLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYS 173 (489)
T ss_pred HHHHHh--ccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChH
Confidence 999988 6544 3558999999999999999999999999877 4588999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 013144 256 GPFVIFGLS 264 (449)
Q Consensus 256 ~~f~~~~~~ 264 (449)
+.|++.++.
T Consensus 174 ~~F~i~~i~ 182 (489)
T PRK10207 174 VTYNLCGAG 182 (489)
T ss_pred HHHHHHHHH
Confidence 999986543
No 89
>PTZ00207 hypothetical protein; Provisional
Probab=99.90 E-value=2.5e-21 Score=188.66 Aligned_cols=295 Identities=12% Similarity=0.049 Sum_probs=212.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHH
Q 013144 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (449)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 172 (449)
...++|..+.......... ...+.++...+.+++++|+|..+++++.+.. .....++++.|++.||+|+|++++++.+
T Consensus 22 ~e~~Rw~~lva~~~~~~~~-g~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~l 99 (591)
T PTZ00207 22 NEPRRFALLVLGAFCSICT-SFMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMT 99 (591)
T ss_pred cccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 3456676666555544443 3445677888999999999999999998874 3455678789999999999999999999
Q ss_pred HHHHHHHHhhhccc----hhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHH
Q 013144 173 LWSLATFLTPWAAD----TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (449)
Q Consensus 173 ~~~i~~~~~~~~~~----~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l 248 (449)
+++++.++++++.. ++++.+.+.|++.|+|.+...+.+...+.+|+| ++||++.|+...+.++|.++.+.+...+
T Consensus 100 l~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l 178 (591)
T PTZ00207 100 VFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAF 178 (591)
T ss_pred HHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888621 489999999999999999999999999999996 8899999999999999997644444444
Q ss_pred HhhhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCC-----CCCCHHHHHHHH-Hhc---cCc------------------
Q 013144 249 MSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRH-----PQISKYELEYIL-REK---QKP------------------ 301 (449)
Q Consensus 249 ~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~---~~~------------------ 301 (449)
.. .+|++.|++.+++.++..++++.+.+++|... ++.++++..... ... .++
T Consensus 179 ~~-~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~ 257 (591)
T PTZ00207 179 FS-DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIV 257 (591)
T ss_pred HH-HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHH
Confidence 33 37899999998888887777777666554322 111222222000 000 000
Q ss_pred --------------------------------cc--------------c-CC----------------CC--------C-
Q 013144 302 --------------------------------LL--------------M-GN----------------KH--------K- 309 (449)
Q Consensus 302 --------------------------------~~--------------~-~~----------------~~--------~- 309 (449)
.. . ++ .+ +
T Consensus 258 yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (591)
T PTZ00207 258 FLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDY 337 (591)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccC
Confidence 00 0 00 00 0
Q ss_pred C-CCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccc--hhhHhhHHHHHHHHHHHHHHHHHHH
Q 013144 310 P-ATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQ--ASWFSAVPWSVMAFTGYLGGLLSDM 386 (449)
Q Consensus 310 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~--~~~~~~~~~~~~~~~~~~~g~l~dr 386 (449)
. +.....+.+.+++..+|.+.+..++.......+...+.++.+..-|.+... ...+.+..++.+.+|++..|.++..
T Consensus 338 ~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~ 417 (591)
T PTZ00207 338 IAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIW 417 (591)
T ss_pred CCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHH
Confidence 0 001126778888999999999999998888888888888888742663322 2337789999999999999999955
Q ss_pred HHHhC
Q 013144 387 LIQRG 391 (449)
Q Consensus 387 ~g~~~ 391 (449)
..+|+
T Consensus 418 ~~~~~ 422 (591)
T PTZ00207 418 SQKRR 422 (591)
T ss_pred HHhhc
Confidence 55554
No 90
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.90 E-value=5.1e-21 Score=186.47 Aligned_cols=311 Identities=12% Similarity=0.078 Sum_probs=205.3
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhh-hhh--cCCCchhhHHHHHHHHHHHHHhhccchhhhhh-cCCchHHHHHHHHHHHH
Q 013144 102 SMLALALALCNADRVVMSVAIVPL-SLA--HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLA 177 (449)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l-~~~--~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~i~ 177 (449)
..+++..+...+..+...+.+|.+ .++ +|.+..+.+++.+.+.++..++++++|+++|| +|||++++++.++.+++
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g 92 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLG 92 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 344455555556555666666665 445 89999999999999999999999999999999 89999999999999999
Q ss_pred HHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcch---hhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCc
Q 013144 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTE---RARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (449)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~---rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 254 (449)
.++.+++ ++++.++++|++.|+|.|...+...++++|++|+++ |+.+++++..+.++|.++||.+++++.++.||
T Consensus 93 ~~~~~~~--~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~ 170 (475)
T TIGR00924 93 HFMLAMS--IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGY 170 (475)
T ss_pred HHHHHhc--ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 9999988 888999999999999999999999999999998754 88899999999999999999999999998999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcC---CCCCCCCCCCHHHHHHHHHhc----------cCccccCCCCC------------
Q 013144 255 FGPFVIFGLSGFLWVLVWLSATS---STPDRHPQISKYELEYILREK----------QKPLLMGNKHK------------ 309 (449)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~------------ 309 (449)
++.|++.++..++..+..++..+ +.|++.++.++++.+...... .......+...
T Consensus 171 ~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (475)
T TIGR00924 171 HVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAV 250 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 99999977655544443333222 122111111111111100000 00000000000
Q ss_pred -------CCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc----chhhHhhHHHHHHHHHHH
Q 013144 310 -------PATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLR----QASWFSAVPWSVMAFTGY 378 (449)
Q Consensus 310 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~----~~~~~~~~~~~~~~~~~~ 378 (449)
..+......+..|...+..+.+...+....+....+.++.+.++..+.+.. ..+++.+...+..++..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p 330 (475)
T TIGR00924 251 IIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSP 330 (475)
T ss_pred HHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHH
Confidence 000000000111222344455555566666666677788888775444322 266788888888888877
Q ss_pred HHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHh
Q 013144 379 LGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (449)
Q Consensus 379 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (449)
+..++..|+.||+.......| +.++++..+++...+
T Consensus 331 ~~~~~~~~l~~~~~~~~~~~k--~~~G~~l~~~~~~~~ 366 (475)
T TIGR00924 331 VLAMIWTRLGRKGKDPTTPLK--FTLGMLFCGASFLTF 366 (475)
T ss_pred HHHHHHHHHHhCCCCCCcHHH--HHHHHHHHHHHHHHH
Confidence 777777777776332222222 244555555554443
No 91
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.90 E-value=7.8e-22 Score=191.78 Aligned_cols=250 Identities=17% Similarity=0.137 Sum_probs=191.7
Q ss_pred hhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhh----cCCch-HHHHHHHHHHHHHHHhhhccc----hhHH
Q 013144 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGKI-IMAWGVALWSLATFLTPWAAD----TSLL 190 (449)
Q Consensus 120 ~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~-~l~~~~~~~~i~~~~~~~~~~----~~~~ 190 (449)
...+.+.+++|+++.++|++.++..+..++..|+.|+++|| +|||| .++++....+++.+++...+. ....
T Consensus 21 ~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~ 100 (437)
T TIGR00792 21 YLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLV 100 (437)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHH
Confidence 35666778899999999999999999999999999999998 67744 677888888888887766621 1256
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHhhcc-CcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh-------hhCchHHHHHHH
Q 013144 191 ALLAMRAVVGLAEGVALPAMNNMVARWF-PQTERARAVAIAMGGFTSGNAIGLVLSPILMS-------QAGIFGPFVIFG 262 (449)
Q Consensus 191 ~l~~~r~l~G~g~g~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~-------~~gwr~~f~~~~ 262 (449)
.+++.+++.+++.+...+...++..|.. ++++|++..++...+..+|..+++.+.+.+.. ..|||+.+++.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~ 180 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLA 180 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHH
Confidence 7788889999998888888888889987 57899999999999999998888777666553 357999999988
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHH
Q 013144 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFV 342 (449)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (449)
++.++..++.++..+|++++.+. +++++.+....++.++++|.++...+..++.....+.
T Consensus 181 ~l~~~~~~~~~~~~~e~~~~~~~--------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (437)
T TIGR00792 181 LIGVVSLIICFFGTKERYSEIPK--------------------NIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNI 240 (437)
T ss_pred HHHHHHHHHHHcCCEecCCCCCc--------------------ccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 88877766666665554421110 0011122344677888999999888888877777776
Q ss_pred HHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 343 ILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 343 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
...+.+.|.+..++ ++...+.+.....++.+++.++.+++.||+|+|
T Consensus 241 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~ 287 (437)
T TIGR00792 241 KNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK 287 (437)
T ss_pred HcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 66666667666555 455667777777888999999999999999987
No 92
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.90 E-value=2.5e-21 Score=186.03 Aligned_cols=276 Identities=12% Similarity=-0.029 Sum_probs=190.6
Q ss_pred HHHHHHHHHHhHhhh-hhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCC-chHHHHHHHHHHHHHHHh
Q 013144 104 LALALALCNADRVVM-SVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KIIMAWGVALWSLATFLT 181 (449)
Q Consensus 104 ~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~~i~~~~~ 181 (449)
+++..+..+.....+ ++..+.+.+++|++..++|++.+++.++..++++++|+++||+|| |+++.++.++..++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 344455555555555 556666778899999999999999999999999999999999965 778888888888888888
Q ss_pred hhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHh--------hccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC
Q 013144 182 PWAADTSLLALLAMRAVVGLAEGVALPAMNNMVA--------RWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (449)
Q Consensus 182 ~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~--------~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 253 (449)
.+. ++++.+++.|++.|++.+...+...++.. |......|.+.+| .+|.++||.+++.+....+
T Consensus 87 ~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~ 158 (418)
T TIGR00889 87 AQV--TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELS 158 (418)
T ss_pred HHh--cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccch
Confidence 888 89999999999999987777766655532 2222223444444 4688888998888743333
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHH
Q 013144 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVAN 333 (449)
Q Consensus 254 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (449)
|+ +|++.+++.++..++ .+..||.|+.+++.+.+ .++....+.++++|+|+++...+..
T Consensus 159 ~~-~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~-------------------~~~~~~~~~~~~~k~~~~~~~~~~~ 217 (418)
T TIGR00889 159 NI-QLYITAGSSALLGVF-ALTLPDIPVAKSTAKMS-------------------IKVMLGLDAFILFKNKRMAIFFFFS 217 (418)
T ss_pred hH-HHHHHHHHHHHHHHH-HhcCCCCCCCccccccC-------------------HHHHhhhhHHHHhcCCCeeeHHHHH
Confidence 54 355555555554444 34456554321110000 0000011345688899988887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcc--------cchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHH
Q 013144 334 AMHSWGFFVILSWMPIYFNFVYHIDL--------RQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIG 405 (449)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~s~--------~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 405 (449)
++..........+.+.|+++ .|.++ ...+...+...+..+++.++.|++.||+|+| .++..+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r---------~~l~~~ 287 (418)
T TIGR00889 218 MLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK---------KVMLLS 287 (418)
T ss_pred HHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHH
Confidence 77666666666778888877 36544 5568888888889999999999999999988 445555
Q ss_pred hHHHHHHHHHhhc
Q 013144 406 FIAPGIALIGLTA 418 (449)
Q Consensus 406 ~~~~~~~~~~~~~ 418 (449)
.+..++....+..
T Consensus 288 ~~~~~v~~~l~~~ 300 (418)
T TIGR00889 288 LVAWALRFGFFAY 300 (418)
T ss_pred HHHHHHHHHHHHH
Confidence 5555555444443
No 93
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.90 E-value=2.1e-20 Score=178.70 Aligned_cols=265 Identities=12% Similarity=0.005 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHH--HHHHHHHHHHhhccc-hhhhhhcCCchHHHHHHHHH-HH
Q 013144 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIV--QSSFLWGYLVSPIAG-GTLVDYYGGKIIMAWGVALW-SL 176 (449)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~--~s~~~~~~~~~~~~~-G~l~dr~Grr~~l~~~~~~~-~i 176 (449)
+..+...++..+.......+.+|.+.++.|.+.+++|++ .++..+...+.++++ ++..||+||||..++.+.+. ++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 456667778888888899999999999999999999997 466788888888888 55799999999876665432 21
Q ss_pred HHHHhh-hccchh-HHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCc
Q 013144 177 ATFLTP-WAADTS-LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (449)
Q Consensus 177 ~~~~~~-~~~~~~-~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 254 (449)
.....+ +....+ ..+++..-++.++..+...+...++..|..++++++...+....+..+|.++|+.+.+++.+..||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 222222 211122 334455556677777888888888999999988889999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHH
Q 013144 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (449)
Q Consensus 255 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (449)
|..|++.+++.++..+..++..|+++++++. ++....++++++|+|.++...+..+
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~l~~~~~~~~~~~~~ 218 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAVASPEA------------------------PLARRASLFRFFRRPLAWSLLALAL 218 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCcccc------------------------chhhHHHHHHHHcCcCHHHHHHHHH
Confidence 9999999988777666655554443221110 0001135678899999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHH-HHHHHHHHHHHHHHHHHHh
Q 013144 335 MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWS-VMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~ 390 (449)
+..........+.+.|+++ .|+++.+++......+. ..+++.++.|++.||+|+|
T Consensus 219 l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~ 274 (390)
T TIGR02718 219 LSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW 274 (390)
T ss_pred HHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 8777788888899999988 59999999998887764 5667789999999999988
No 94
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.89 E-value=7.8e-22 Score=195.70 Aligned_cols=277 Identities=17% Similarity=0.101 Sum_probs=194.6
Q ss_pred hhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhh
Q 013144 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (449)
Q Consensus 126 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 205 (449)
.+.++.+.....+..+++.+|..+|++++|+++||+|||+++++++++..++.++.+++ +|++.+++.|+++|++.+.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a--~~~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA--PNYWMFLIFRFLSGFFGSG 187 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHhhccc
Confidence 35566788899999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 013144 206 ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQ 285 (449)
Q Consensus 206 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (449)
....+..++.|++++++|+.+..+ ......+..+++++++++.. +||+.+++..++.++.++. +++.+|.|+....
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~ 263 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLS 263 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHH
Confidence 999999999999999999999999 88888888888888888877 8999999999988877666 5566677765322
Q ss_pred -CCHHHHHHHHHhccC------cc----cc--C-C--CCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 013144 286 -ISKYELEYILREKQK------PL----LM--G-N--KHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPI 349 (449)
Q Consensus 286 -~~~~~~~~~~~~~~~------~~----~~--~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (449)
.+.++..+..++..+ .. .. . + ..........+.++++.|++....+...+..+.......-++.
T Consensus 264 ~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~ 343 (521)
T KOG0255|consen 264 KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSL 343 (521)
T ss_pred cCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhh
Confidence 222333322222110 00 00 0 0 0001112234667777775444444333333222222222222
Q ss_pred HHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhcccc
Q 013144 350 YFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS 421 (449)
Q Consensus 350 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (449)
.... +|.+ ........+.....+....+...|+.||| .....+.+..+++++.......
T Consensus 344 ~~~~-lg~~---~~~~~~~~~~~~~p~~~~~~~~~~~~gR~---------~~~~~~~~~~~~~~~~~~~~~~ 402 (521)
T KOG0255|consen 344 NVSG-LGGN---IYLNFTLSGLVELPAYFRNGLLLPEFGRR---------PPLFLSLFLAGIGLLLFGWLPD 402 (521)
T ss_pred hhhh-cCch---HHHHHHHHHHHHhhHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHhhc
Confidence 2222 2332 23333444446677777778999999888 5666666666666666655543
No 95
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.89 E-value=1.2e-21 Score=173.67 Aligned_cols=251 Identities=14% Similarity=0.030 Sum_probs=168.4
Q ss_pred hhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhh
Q 013144 127 LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVA 206 (449)
Q Consensus 127 ~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~ 206 (449)
+..+.+..-.|.+.+.+.+++.+.++.+|.++||||||+++++|++..++...+.+++ .|+..++++|++.|+..|.
T Consensus 61 ~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S--~~F~afv~aR~l~Gi~kgn- 137 (451)
T KOG2615|consen 61 EPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS--RNFAAFVLARFLGGIFKGN- 137 (451)
T ss_pred CcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhhhhccCc-
Confidence 3334456678999999999999999999999999999999999999999999999999 9997788889999999875
Q ss_pred hhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh---hhCchHHH---HHHHHHHHHHHHHHHHhcCCCC
Q 013144 207 LPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS---QAGIFGPF---VIFGLSGFLWVLVWLSATSSTP 280 (449)
Q Consensus 207 ~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~---~~gwr~~f---~~~~~~~~~~~~~~~~~~~~~~ 280 (449)
..++.++++|.+++|+|+++++.++..+++|.++||.+|+++.+ ..|--+.+ ++..+++........++.||+-
T Consensus 138 l~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 138 LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred hHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 67789999999999999999999999999999999999999987 33322111 1222222221233344456654
Q ss_pred CCCCCCCH-HHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHH-------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 013144 281 DRHPQISK-YELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTW-------SIIVANAMHSWGFFVILSWMPIYFN 352 (449)
Q Consensus 281 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (449)
+.+++.++ .+.++..+... +. .+.+ +..-....||+... .+.+..+.+...+..+.++.+.+..
T Consensus 218 ~~rk~~~~~~~~~~~~~~~~------~~-~~~~-~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~ 289 (451)
T KOG2615|consen 218 PLRKRNDEHSTLQEAADDRL------AL-LKFA-RIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTH 289 (451)
T ss_pred cchhhcccccchhhhhhhhh------hh-cchh-hhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhc
Confidence 43333211 00111000000 00 0000 00111233443322 2233333333344444444444445
Q ss_pred HhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHH
Q 013144 353 FVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI 388 (449)
Q Consensus 353 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 388 (449)
+.+|+++.+.|.+++..++...+.+.......+|.+
T Consensus 290 ~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~ 325 (451)
T KOG2615|consen 290 GRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYK 325 (451)
T ss_pred CccCCChhhheeeeehhhHHHHHHHHhccccccccc
Confidence 668999999999999998888877777766666654
No 96
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.88 E-value=3.1e-22 Score=181.59 Aligned_cols=338 Identities=13% Similarity=0.127 Sum_probs=234.7
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhc-C-------CCchhhHHHHHHHHHHHHHhhccchhhhhhcCC
Q 013144 92 FITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAH-G-------WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG 163 (449)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~-------~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr 163 (449)
...+++...+.+..++.+.+.++..+++.+.+.+...+ | .++...+.+..+..+|.++|++++|++.||+||
T Consensus 34 g~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GR 113 (538)
T KOG0252|consen 34 GLQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGR 113 (538)
T ss_pred chhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 34567788889999999999999999999988887654 2 455677899999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHhhhccc-----hhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhh
Q 013144 164 KIIMAWGVALWSLATFLTPWAAD-----TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGN 238 (449)
Q Consensus 164 r~~l~~~~~~~~i~~~~~~~~~~-----~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~ 238 (449)
|+++...++++.++++++++... .-.+++.+.|++.|+|.|+.+|.+.++.+|...+++||...+.+.+..++|.
T Consensus 114 K~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 114 KKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred hhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 99999999999999998877621 2377899999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHhhh---------------CchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccc
Q 013144 239 AIGLVLSPILMSQA---------------GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLL 303 (449)
Q Consensus 239 ~~g~~l~~~l~~~~---------------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (449)
..|.+++-.+...+ =||..|.+.++++++... +.+..||+++...-.+++ .+...++.++...
T Consensus 194 laG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly-~Rl~M~Et~~Y~al~~~~-~~~a~~d~~k~~~ 271 (538)
T KOG0252|consen 194 LAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLY-FRLKMPETARYTALVSKK-LKQAAGDMKKVLS 271 (538)
T ss_pred hhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH-hhhcCCcchhHHHHhhcC-Hhhhhhccccccc
Confidence 98888877664321 299998887777666443 344456655432111111 0011111111100
Q ss_pred c---------CCCCCCCCCchhHHHhhcc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhh-------
Q 013144 304 M---------GNKHKPATVIPPFRRLLSK---MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASW------- 364 (449)
Q Consensus 304 ~---------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~------- 364 (449)
. ...+..++....+...+.. +.....+..+|+.-.++|....+....++. .|+.+.+..+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA 350 (538)
T KOG0252|consen 272 VDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVA 350 (538)
T ss_pred cccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHH
Confidence 0 0001111111122222222 456667778888888888888888888887 4776655444
Q ss_pred -HhhHH-HHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhcccc----hhHHHHHHHHHHHhhhh
Q 013144 365 -FSAVP-WSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS----PVMASAWLTLAIGMKSF 438 (449)
Q Consensus 365 -~~~~~-~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 438 (449)
...+. ..+.+.|..+...++|++||+ ...+.+++++.+..+.+....+ .....++..+..++..+
T Consensus 351 ~~~~iia~~~~vPGyw~tv~~id~iGRk---------~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NF 421 (538)
T KOG0252|consen 351 EGNLIIAVCSTVPGYWFTVYFIDIIGRK---------YIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNF 421 (538)
T ss_pred HHHHHHHHHccCCceeEEEEEeehhhhH---------HHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhc
Confidence 11111 122234556777899999998 7778888888888887776544 12223344445555555
Q ss_pred ccc
Q 013144 439 SHS 441 (449)
Q Consensus 439 ~~~ 441 (449)
+..
T Consensus 422 GPn 424 (538)
T KOG0252|consen 422 GPN 424 (538)
T ss_pred CCC
Confidence 443
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.85 E-value=7.4e-19 Score=172.33 Aligned_cols=164 Identities=15% Similarity=0.133 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHhHhhhhh-hhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhh-cCCchHHHHHHHHHHHHHHH
Q 013144 103 MLALALALCNADRVVMSV-AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLATFL 180 (449)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~i~~~~ 180 (449)
.+++..+...+..+.+.. ....+.+++|.+..+.+++.+.+........+++|+++|| +|||++++++.++.+++..+
T Consensus 25 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l 104 (500)
T PRK09584 25 LIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYAL 104 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 344444444444444444 4445668899999999999988887777777889999999 59999999999999999998
Q ss_pred hhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcch--hhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHH
Q 013144 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTE--RARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (449)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~--rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f 258 (449)
++++. ++.+.++++|+++|+|.|...+...+++.|++|+++ |+.++++++.+.++|..+||.+++++.+++|||+.|
T Consensus 105 ~~~~~-~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F 183 (500)
T PRK09584 105 VAWSG-HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAF 183 (500)
T ss_pred HHHhc-ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHH
Confidence 88861 346677888999999999989999999999998643 556889999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 013144 259 VIFGLSGFL 267 (449)
Q Consensus 259 ~~~~~~~~~ 267 (449)
++.++..++
T Consensus 184 ~i~~i~~~i 192 (500)
T PRK09584 184 ALSVVGMLI 192 (500)
T ss_pred HHHHHHHHH
Confidence 997754444
No 98
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.84 E-value=6.4e-18 Score=161.64 Aligned_cols=292 Identities=16% Similarity=0.086 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhh----hcCCchHHHHH-HHHHHH
Q 013144 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD----YYGGKIIMAWG-VALWSL 176 (449)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Grr~~l~~~-~~~~~i 176 (449)
+.++...+...+.+....+..+++.+++|.+..+.+++..+..+...+.+++.|+++| |+|||+.++++ .....+
T Consensus 7 i~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~ 86 (477)
T TIGR01301 7 LRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAF 86 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHH
Confidence 3344444555666667777777788999999999999999999999999999999999 59999988875 666666
Q ss_pred HHHHhhhccchhHH-----------------HHHHHHHHHhhhhhhhhhHHHHHHhhccCcchh--hHHHHHHHHhhhhh
Q 013144 177 ATFLTPWAADTSLL-----------------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTER--ARAVAIAMGGFTSG 237 (449)
Q Consensus 177 ~~~~~~~~~~~~~~-----------------~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r--g~~~~~~~~~~~~G 237 (449)
+.++.+++ ++.+ .++++-.+..++.....+...++++|.+|+++| +.+.++.+...++|
T Consensus 87 ~l~ll~~~--~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG 164 (477)
T TIGR01301 87 AVILIGFA--ADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIG 164 (477)
T ss_pred HHHHHHhC--chhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHH
Confidence 66777776 4432 233333445557777888899999999998765 68999999999999
Q ss_pred hHhHHHHHHHH--Hhhh-------------CchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCcc
Q 013144 238 NAIGLVLSPIL--MSQA-------------GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPL 302 (449)
Q Consensus 238 ~~~g~~l~~~l--~~~~-------------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (449)
.++|+.++++. .+.+ +.|+.|++.+++.++..++..+..+|.|...++..+++ +.
T Consensus 165 ~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~-~~--------- 234 (477)
T TIGR01301 165 NVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS-EA--------- 234 (477)
T ss_pred HHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh-hc---------
Confidence 99999999875 2222 56889999888877777777777777654221110000 00
Q ss_pred ccCCCCCCCCCchhHHHhhcc-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCcccc----------hhhHh
Q 013144 303 LMGNKHKPATVIPPFRRLLSK-----MPTWSIIVANAMHSWGFFVILSWMPIYFNF-VYHIDLRQ----------ASWFS 366 (449)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~----------~~~~~ 366 (449)
++.++......+++++++ |.++.+++..++..++.+.+..|.+.|+.+ .++-++.. ..+..
T Consensus 235 ---~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l 311 (477)
T TIGR01301 235 ---APPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGL 311 (477)
T ss_pred ---ccccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHH
Confidence 000011111123333322 568889999999999999999999999874 55543321 11233
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHh
Q 013144 367 AVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (449)
Q Consensus 367 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (449)
....+...+.+++..++.+|+|+| |.+..++.+..++++...
T Consensus 312 ~~~s~~~~i~s~~l~~l~~~~g~~--------k~~~~~s~~~~~~~l~~~ 353 (477)
T TIGR01301 312 MLNSVVLGITSIGMEKLCRGWGAG--------KRLWGIVNIILAICLAAT 353 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc--------hhHHHHHHHHHHHHHHHH
Confidence 344445556666777777777743 234345544444444443
No 99
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.84 E-value=1.4e-24 Score=211.88 Aligned_cols=280 Identities=19% Similarity=0.183 Sum_probs=193.7
Q ss_pred HHHHHHHHHhHhhhhhhhhhhh--hhcCC---------CchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHH
Q 013144 105 ALALALCNADRVVMSVAIVPLS--LAHGW---------SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (449)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~--~~~~~---------~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 173 (449)
.++.+..+++....+...+... ..+.. +..+.+++.+...+|..+|+++.|.++||+|||+.++++.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 3445777777777766655544 22222 223578999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccch---hHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh
Q 013144 174 WSLATFLTPWAADT---SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (449)
Q Consensus 174 ~~i~~~~~~~~~~~---~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~ 250 (449)
..++.++.+++ + +++.+.++|+++|++.|...+....++.|..|+++|++..++.+.+..+|..++..++..+..
T Consensus 86 ~~i~~~~~~~~--~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~ 163 (451)
T PF00083_consen 86 MIIGSILIAFA--PSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY 163 (451)
T ss_pred ccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999 8 999999999999999999999999999999999999999999999999999999888766644
Q ss_pred hh---CchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC-CHHHHHHHHHhccC------ccccC--CCCCCCCCchhHH
Q 013144 251 QA---GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQI-SKYELEYILREKQK------PLLMG--NKHKPATVIPPFR 318 (449)
Q Consensus 251 ~~---gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~ 318 (449)
.. +||+.+++.++++++..+.. +..||+|+.--.. +.+|.++..++... +..+. +.++.++....++
T Consensus 164 ~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (451)
T PF00083_consen 164 YSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWR 242 (451)
T ss_pred ccccccccccccccccccccccccc-cccccccceecccccccccccccccccccccccccccccccccccccccceeee
Confidence 33 49999999888887655544 5668888753222 22222222222100 00000 0001111113455
Q ss_pred Hhhcccc----HHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 319 RLLSKMP----TWSIIVANAMH-SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 319 ~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
++++++. +........+. ..+.+....+.+.++++ .+.+.. -.......+...++.+++.++.||+|||
T Consensus 243 ~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr 316 (451)
T PF00083_consen 243 DLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRR 316 (451)
T ss_pred eccccccccccccccccccccccccccccccccccccccc-cccccc--cccccccccccccccccccccccccccc
Confidence 6666532 22222222222 33334455566666655 476655 2233344456677788888999999999
No 100
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.84 E-value=2.1e-18 Score=157.11 Aligned_cols=280 Identities=15% Similarity=0.138 Sum_probs=225.9
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHH
Q 013144 92 FITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGV 171 (449)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 171 (449)
+..++||.++++.++..+.+.+.+..+++........++ +....-|..-+|++.+....+++-|+.||+|-|..++++.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 356788999999999999999999999999999988899 8888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccc----hhHH--HHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHH
Q 013144 172 ALWSLATFLTPWAAD----TSLL--ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS 245 (449)
Q Consensus 172 ~~~~i~~~~~~~~~~----~~~~--~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~ 245 (449)
...++|..+-..+.. +.++ ....+..+.+.+.-.....-..+..-||++++|..+..+-..+..+|.++|.++.
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcc
Confidence 999999998665521 3455 7778889999888877777778889999999999999999999999999999998
Q ss_pred HHHHhhh------CchH--HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhH
Q 013144 246 PILMSQA------GIFG--PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPF 317 (449)
Q Consensus 246 ~~l~~~~------gwr~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (449)
..+..+- .|.. .|+..+.++.+.+++..+..+++|+.++....... .+.+.....
T Consensus 197 pilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~-----------------~~~~f~~si 259 (480)
T KOG2563|consen 197 PILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAAL-----------------QDASFPKSI 259 (480)
T ss_pred ceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhh-----------------hcCcHHHHH
Confidence 8887643 3544 35545555555555556666665554433221111 122345678
Q ss_pred HHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 318 RRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
++.++++++....+.+.+....+++..+.+-.-+.. .|++...+|+......++++++.++.|.+.||.++-
T Consensus 260 ~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f 331 (480)
T KOG2563|consen 260 KSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF 331 (480)
T ss_pred HHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence 899999999999999888888888887777655555 377778999999999999999999999999998765
No 101
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.82 E-value=2.9e-17 Score=157.85 Aligned_cols=168 Identities=13% Similarity=0.108 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHhHhhhhhhhhh-hhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhc-CCchHHHHHHHHHHHHHHH
Q 013144 103 MLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALWSLATFL 180 (449)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~i~~~~ 180 (449)
.++...+...+..+.+...+|. +.+++|.++.+.+.+.+.+.....++.+++|+++||+ |||++++++.++..++.++
T Consensus 13 ~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~ll 92 (493)
T PRK15462 13 YVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVV 92 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHH
Confidence 3444444445444455555554 4567899999999999999999999999999999999 9999999999999999887
Q ss_pred hhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcc--hhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHH
Q 013144 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQT--ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (449)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~--~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f 258 (449)
++... .+...++++..+.++|.|...+...++++|.+|++ +|..++++...+.++|..++|.+.+++.+..||++.|
T Consensus 93 l~~~~-~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F 171 (493)
T PRK15462 93 LGASE-IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGF 171 (493)
T ss_pred HHHhh-cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHH
Confidence 76541 12233444455556667777788889999999875 6999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 013144 259 VIFGLSGFLWVLV 271 (449)
Q Consensus 259 ~~~~~~~~~~~~~ 271 (449)
.+.++..++.++.
T Consensus 172 ~iaaigm~l~li~ 184 (493)
T PRK15462 172 GLAAVGMIAGLVI 184 (493)
T ss_pred HHHHHHHHHHHHH
Confidence 9876544443333
No 102
>PRK09669 putative symporter YagG; Provisional
Probab=99.81 E-value=1.6e-17 Score=161.57 Aligned_cols=248 Identities=16% Similarity=0.088 Sum_probs=175.1
Q ss_pred hhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhh----cCCc-hHHHHHHHHHHHHHHHhhhcc----chhH
Q 013144 119 SVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGK-IIMAWGVALWSLATFLTPWAA----DTSL 189 (449)
Q Consensus 119 ~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr-~~l~~~~~~~~i~~~~~~~~~----~~~~ 189 (449)
......+.+++|++..++|.+.++..+..++..|+.|+++|| +||| +.++.+.+..++..++....+ ...+
T Consensus 30 ~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~ 109 (444)
T PRK09669 30 LFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKI 109 (444)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 345666778899999999999999999999999999999999 7874 556677777777776554442 1235
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHhhcc-CcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh-------hhCchHHHHHH
Q 013144 190 LALLAMRAVVGLAEGVALPAMNNMVARWF-PQTERARAVAIAMGGFTSGNAIGLVLSPILMS-------QAGIFGPFVIF 261 (449)
Q Consensus 190 ~~l~~~r~l~G~g~g~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~-------~~gwr~~f~~~ 261 (449)
+++++..++.+.+.........++.+|+. ++++|.+..++...+..+|..+++.+...+.. ..||+..+.+.
T Consensus 110 ~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~ 189 (444)
T PRK09669 110 IYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVM 189 (444)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 66777777777777777777889999998 56889999899888888888888776555443 24688888888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHH
Q 013144 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (449)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (449)
++++++..++.++..+|.++..+ +++.+...+++.++|||.++...+..++......
T Consensus 190 ~ii~~v~~~~~~~~~~e~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~ 246 (444)
T PRK09669 190 GLLGVVLFFCCFFMTKERYTPEV-----------------------DNSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVV 246 (444)
T ss_pred HHHHHHHHHHHhCCeEEecCCCC-----------------------cCCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 77776665555554444321110 0112234567888999999888877776666665
Q ss_pred HHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
......+.|.+...+. +...+.+.....+..+++.++.+++.||+|+|
T Consensus 247 ~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~ 294 (444)
T PRK09669 247 TRGGATLYYVNYVLLR-PDLATLFLVTGMIAGLFGALLSERLLGKFDRV 294 (444)
T ss_pred HHhhhhheeeeeecCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 5555454444443332 23334444555567778888999999999988
No 103
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.81 E-value=4.1e-19 Score=151.16 Aligned_cols=281 Identities=15% Similarity=0.207 Sum_probs=211.5
Q ss_pred chhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhh-cCCchHHHHHHH
Q 013144 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVA 172 (449)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~ 172 (449)
..+|...+..+|+..+.+++.....+....++..|.+++.++..++.+.|.....+.+++.|++.|| +|-|..-++-+.
T Consensus 39 l~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~ 118 (459)
T KOG4686|consen 39 LGHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCI 118 (459)
T ss_pred hhhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHH
Confidence 3456677788888888888888888888899999999999999999999999999999999999997 788888777788
Q ss_pred HHHHHHHHhhhcc-chhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh
Q 013144 173 LWSLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ 251 (449)
Q Consensus 173 ~~~i~~~~~~~~~-~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~ 251 (449)
+..+|.++.+... .+.+|.+.++|++.|+|.-...++.+++...|+..|+.+.++|+..+...+|..+--.+.+++.+.
T Consensus 119 fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 119 FVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred HHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 8888888765431 278999999999999998888889999999999999999999999999999998888888887765
Q ss_pred hCch------H---HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhc
Q 013144 252 AGIF------G---PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLS 322 (449)
Q Consensus 252 ~gwr------~---~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (449)
.+-- . .....+...+..-++..... ...++.+++..+..+.. ..++ ....+. .-+
T Consensus 199 ~~~~~~~~ghT~LG~~l~~~~~tc~~slical~l--------g~~D~rAerilh~e~g~--~Ge~----pkLtdv-~~f- 262 (459)
T KOG4686|consen 199 MGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSL--------GLSDDRAERILHLEEGF--LGEE----PKLTDV-NTF- 262 (459)
T ss_pred HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHh--------hhhhhHHHHHHhhhcCc--ccCC----cccccc-ccc-
Confidence 4311 0 11111111111111111110 00111122222111110 0011 111111 111
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 323 KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.|.+|.+.++.++.+...+.+...-|.++++.+|+|+..++.+.+.......+..++.|.++||.|++
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n 330 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFN 330 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcce
Confidence 47899999999999999999999999999999999999999999999888999999999999999988
No 104
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.81 E-value=3.6e-18 Score=165.25 Aligned_cols=269 Identities=18% Similarity=0.218 Sum_probs=207.4
Q ss_pred hhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhh----hcCCch-HHHHHHHHHHHHHHHhhhc-c-c----hh
Q 013144 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD----YYGGKI-IMAWGVALWSLATFLTPWA-A-D----TS 188 (449)
Q Consensus 120 ~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Grr~-~l~~~~~~~~i~~~~~~~~-~-~----~~ 188 (449)
...+.+.+.+|+++..+|++..+..+..++..|+.|.++| |+|||| .++++....+++.+++... + . ..
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 4466677788999999999999999999999999999999 899766 5567778888887776654 2 0 13
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHhhccC-cchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh-------CchHHHHH
Q 013144 189 LLALLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-------GIFGPFVI 260 (449)
Q Consensus 189 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~-------gwr~~f~~ 260 (449)
..++.+..++..++.........++..|..+ +++|.+..+.-..+..+|.++...+.+.+.+.+ +|++..++
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 4456777777799989889999999999997 578999999999999999877777776665432 58999998
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHH
Q 013144 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (449)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (449)
.+++.++..++..+..+|.+++. .+++++.+.+..++.+++||.++...+..++.....
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~---------------------~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~ 241 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEV---------------------TEQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAF 241 (428)
T ss_pred HHHHHHHHhhhhhheeeeccccc---------------------cccccccccccchhhhcccchHHHHHHHHHHHHhhh
Confidence 88888887777777776621111 122333445567889999999999999999988888
Q ss_pred HHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhcc
Q 013144 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA 419 (449)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (449)
.......+.|.+...|.+ ...+.+.....++.+++.++.++++||+|+|+ ....+.+..+++.+.+.+.
T Consensus 242 ~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~---------~~~~~~~~~~~~~~~~~~~ 310 (428)
T PF13347_consen 242 ALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKK---------VYIIGLLLAALGFLLLFFL 310 (428)
T ss_pred hhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHcccee---------ehhhhHHHHHHHHHHHHHH
Confidence 888888899999887776 55677777888889999999999999999983 3344444444444444443
No 105
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.78 E-value=2e-16 Score=149.63 Aligned_cols=280 Identities=15% Similarity=0.092 Sum_probs=202.5
Q ss_pred HHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcC-CchHHHHHHHHHHHHHHHhhhc
Q 013144 106 LALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG-GKIIMAWGVALWSLATFLTPWA 184 (449)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-rr~~l~~~~~~~~i~~~~~~~~ 184 (449)
..+++.++..+++.|..+..-++.|.|..|+|.+.+...+...++++++|.++||++ +|+.+.+..++.++........
T Consensus 9 ~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~ 88 (400)
T PF03825_consen 9 LMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFS 88 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 345555666667777888888899999999999999999999999999999999986 5778878777777777666666
Q ss_pred cchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHH-HHHHHhhhCc---hHHHHH
Q 013144 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVL-SPILMSQAGI---FGPFVI 260 (449)
Q Consensus 185 ~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l-~~~l~~~~gw---r~~f~~ 260 (449)
++++.+++.-++..+......|...++.-+... +++.-.|-.-...++|.+++... ++.+....++ .+.+++
T Consensus 89 --~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i 164 (400)
T PF03825_consen 89 --SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYI 164 (400)
T ss_pred --ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHH
Confidence 889988888888888888888888888888874 34455566666667777666543 2333333332 345555
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHH
Q 013144 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (449)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (449)
.+...++..... +..|+.|.+++. ++..++....+..+++|+|+++...+..++.....
T Consensus 165 ~~~~~~ll~~~~-l~lp~~~~~~~~--------------------~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~ 223 (400)
T PF03825_consen 165 AAILSLLLAGFA-LFLPKTPPKRSA--------------------KESVKKLLGLDALKLLKNPRFLVFLLAAFLIGISH 223 (400)
T ss_pred HHHHHHHHHHHH-HhCCCCcccccc--------------------CCCcccccchHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 555544433333 334555522111 11111112224457999999999999888888888
Q ss_pred HHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhcc
Q 013144 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA 419 (449)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (449)
.....+.+.|+++..|.+....+...++..+..++.-...+++..|+|.+ .++.++.+..++=..++...
T Consensus 224 ~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~---------~ll~~a~~~~~vR~~l~a~~ 293 (400)
T PF03825_consen 224 AAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK---------WLLLLALVAYAVRWLLYAYF 293 (400)
T ss_pred HHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHHHHHHHh
Confidence 88999999999996337777788877777778888888889999998877 56677777777776666665
No 106
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.77 E-value=9.7e-18 Score=163.49 Aligned_cols=292 Identities=16% Similarity=0.147 Sum_probs=229.7
Q ss_pred HHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHH
Q 013144 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT 178 (449)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~ 178 (449)
..+.++++..+...+....+...+..+.+.|+++.++.|++.+.+-++..+...+..+..-|.-|-+.+-+|++++++++
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 34556666677777777888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhc--------------------c---------------------------chh--HH-HHHHHHHHHhhhhhhhhh
Q 013144 179 FLTPWA--------------------A---------------------------DTS--LL-ALLAMRAVVGLAEGVALP 208 (449)
Q Consensus 179 ~~~~~~--------------------~---------------------------~~~--~~-~l~~~r~l~G~g~g~~~~ 208 (449)
+++++- + ..+ ++ .++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 997652 0 000 33 577889999999999999
Q ss_pred HHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh-------------------CchHHHHHHHHHHHHHH
Q 013144 209 AMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-------------------GIFGPFVIFGLSGFLWV 269 (449)
Q Consensus 209 ~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~-------------------gwr~~f~~~~~~~~~~~ 269 (449)
.+.+|+-|...+++-+..+|+......+|.++|.++++++...+ -|...|++.+.+.++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999986522 26777888888888888
Q ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHhccCc-cccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHH
Q 013144 270 LVWLSATSSTPDRHPQISKYELEYILREKQKP-LLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMP 348 (449)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (449)
+..++++++.|+..++.+.++.+....+.... ......++-+.....++++++||.+...++...+....+.++.+++|
T Consensus 337 ~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlP 416 (735)
T KOG3626|consen 337 VPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLP 416 (735)
T ss_pred HHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhH
Confidence 87777766666554432111111111111000 00000001123345678899999999999999999999999999999
Q ss_pred HHHHHhhCCcccchhhHhhHHHHH-HHHHHHHHHHHHHHHHHh
Q 013144 349 IYFNFVYHIDLRQASWFSAVPWSV-MAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 349 ~~~~~~~g~s~~~~~~~~~~~~~~-~~~~~~~~g~l~dr~g~~ 390 (449)
.|++..+|.++..+..+....++. ..+|.+++|++..|+.-+
T Consensus 417 KyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 417 KYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 999999999999999988776664 477889999999988644
No 107
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.77 E-value=1.1e-16 Score=156.70 Aligned_cols=251 Identities=12% Similarity=0.009 Sum_probs=176.8
Q ss_pred hhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhh----hcCC-chHHHHHHHHHHHHHHHhhhccc--h--hHHH
Q 013144 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD----YYGG-KIIMAWGVALWSLATFLTPWAAD--T--SLLA 191 (449)
Q Consensus 121 ~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Gr-r~~l~~~~~~~~i~~~~~~~~~~--~--~~~~ 191 (449)
....+.+.+|+++.++|.+..+..+.-++..|+.|.++| |+|| |+.++++.+..+++.+++...+. + .+..
T Consensus 29 l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~ 108 (473)
T PRK10429 29 LMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVF 108 (473)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHH
Confidence 455566778999999999999999999999999999999 6698 56677788777777666544310 1 2456
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhcc-CcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh-------hCchHHHHHHHH
Q 013144 192 LLAMRAVVGLAEGVALPAMNNMVARWF-PQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-------AGIFGPFVIFGL 263 (449)
Q Consensus 192 l~~~r~l~G~g~g~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~-------~gwr~~f~~~~~ 263 (449)
+++..++.+++.....+...++..|.. ++++|.+..++-..+.++|..+.+.+...+.+. .||+....+.++
T Consensus 109 ~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~ 188 (473)
T PRK10429 109 VCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIA 188 (473)
T ss_pred HHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 667777888888888888999999999 589999999987777777766666555443332 246666666666
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHH
Q 013144 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (449)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (449)
+.++..+..++..+|.+...... .+++++.+.+..++.+++||.++...+..++........
T Consensus 189 ~~~~~~~~~~~~~~e~~~~~~~~------------------~~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~ 250 (473)
T PRK10429 189 FFIVSTIITLRNVHEVYSSDNQV------------------SAEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNII 250 (473)
T ss_pred HHHHHHHHHHcCceecCCccccc------------------cccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 65555555555445442211000 001112233445667778988888888888777777777
Q ss_pred HHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
..+.+.|++...+ +....+.+.....++.+++.++.+++.||+|+|
T Consensus 251 ~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk 296 (473)
T PRK10429 251 NGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRR 296 (473)
T ss_pred hhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 6777766665433 445566666666788899999999999999988
No 108
>PRK09848 glucuronide transporter; Provisional
Probab=99.76 E-value=3.7e-16 Score=152.17 Aligned_cols=246 Identities=11% Similarity=0.046 Sum_probs=159.9
Q ss_pred hhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhc----CCchHH-HHHHHHHHHHHHHhhhcc-----chhHH
Q 013144 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY----GGKIIM-AWGVALWSLATFLTPWAA-----DTSLL 190 (449)
Q Consensus 121 ~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~----Grr~~l-~~~~~~~~i~~~~~~~~~-----~~~~~ 190 (449)
....+.+.+|+++.++|.+.+...+..++..++.|+++||. |||+.. +++.+...+..++....+ ....+
T Consensus 31 l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (448)
T PRK09848 31 LLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVV 110 (448)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHH
Confidence 44567778899999999999999999999999999999996 767644 555554544444432111 01234
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHhhccC-cchhhHHHHHHHHhhh-----hhhHhHHHHHHHHHhhh--CchHHHHHHH
Q 013144 191 ALLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFT-----SGNAIGLVLSPILMSQA--GIFGPFVIFG 262 (449)
Q Consensus 191 ~l~~~r~l~G~g~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~-----~G~~~g~~l~~~l~~~~--gwr~~f~~~~ 262 (449)
.+++..++.+++.+...+...++..+..+ +++|.+..++-..+.+ +|..++|.+++...... +|.....+.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~ 190 (448)
T PRK09848 111 YAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLA 190 (448)
T ss_pred HHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 45556677888888888777787777764 4678887766654433 44555555554321111 1211112223
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHH
Q 013144 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFV 342 (449)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (449)
+++++..++.....||+++.+ .++......++.++|||.++...+..++.......
T Consensus 191 v~~~~~~~~~~~~~~e~~~~~------------------------~~~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~ 246 (448)
T PRK09848 191 IAGMVLYFICFKSTRENVVRI------------------------VAQPSLKISLQTLKRNRPLFMLCIGALCVLISTFA 246 (448)
T ss_pred HHHHHHHHHHHcCcEeccCCC------------------------ccCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 333332223333333332111 01112334577899999999988888888888888
Q ss_pred HHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 343 ILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 343 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.....|.|+++.+|.++...++......++.+++.++.+++.||+++|
T Consensus 247 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~ 294 (448)
T PRK09848 247 VSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK 294 (448)
T ss_pred HhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 888888898888887766555555444566788899999999999987
No 109
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.76 E-value=3.6e-16 Score=143.74 Aligned_cols=182 Identities=12% Similarity=0.076 Sum_probs=144.1
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh---------------
Q 013144 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ--------------- 251 (449)
Q Consensus 187 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~--------------- 251 (449)
.+|+.++++-++.|.|.+...+..+.++++..+++++++.+++.+.++++|..+||.+++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~ 87 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAE 87 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHH
Confidence 78999999999999999999999999999999999999999999999999999999999988732
Q ss_pred -hCchHHHHHHHHHHHHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHH
Q 013144 252 -AGIFGPFVIFGLSGFLWVLVWLSA-TSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSI 329 (449)
Q Consensus 252 -~gwr~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (449)
..|+++|++.+.+.++..+++.+. .||.+++.. ++ . .+++. ...++.+++|.++..
T Consensus 88 ~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~----~~---------------~-~~~~~--~~~~~~~~~~~~~l~ 145 (310)
T TIGR01272 88 AAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADV----AR---------------V-SSGDT--TQKTSAFQFTHLVLG 145 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccc----cc---------------c-ccccc--cchhhHHhhHHHHHH
Confidence 479999997766655544443333 222111100 00 0 00000 012246778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--hCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 330 IVANAMHSWGFFVILSWMPIYFNFV--YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.+..++......+...|++.|+.+. +|+++.+++...+....+.++|+++++++.||+++|
T Consensus 146 ~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~ 208 (310)
T TIGR01272 146 ALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG 208 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 8888887778999999999999864 689999999999999999999999999999999987
No 110
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.76 E-value=4.3e-16 Score=144.61 Aligned_cols=291 Identities=16% Similarity=0.121 Sum_probs=187.6
Q ss_pred HHHHHHHHhHhhhhhhhhhhh-hhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHH--HHH-HHh
Q 013144 106 LALALCNADRVVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS--LAT-FLT 181 (449)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~--i~~-~~~ 181 (449)
+.++..++.++..-+..+... ++.|++.+++|.+.++..+...+.+++.|.++||+|.||-++..+.+.. .+. +..
T Consensus 14 ~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~ 93 (412)
T PF01306_consen 14 LFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIY 93 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 334444444556666655544 4589999999999999999999999999999999997775544433222 222 222
Q ss_pred hhcc--chhH-HHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHH
Q 013144 182 PWAA--DTSL-LALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (449)
Q Consensus 182 ~~~~--~~~~-~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f 258 (449)
.+.+ ..|. ...+++-+..|+......|+.-+++.++. ++.+.-.|-.-+..++|.+++..++|.+.+. +-...|
T Consensus 94 v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~f 170 (412)
T PF01306_consen 94 VFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIF 170 (412)
T ss_dssp THHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHH
Confidence 2220 0222 23344444455555566677777777665 4556667777788899999999999999874 556788
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHH
Q 013144 259 VIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSW 338 (449)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (449)
|+....+++..++.++..|+.+++.+..+.. ..++++....+..+++|+|++|.+.+.......
T Consensus 171 wi~s~~~~il~lll~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~ 234 (412)
T PF01306_consen 171 WIASAAAIILLLLLLLLKPDVPPQAEVADAL----------------GAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAA 234 (412)
T ss_dssp HHHHHHHHHHHHHHHSS---SSSSS-SSTTS----------------SS------HHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcCchhhhhhccc----------------ccCCCCCcHHHHHHHhcchhHHHHHHHHHHHHH
Confidence 8777666666655555554444332111100 111122223456689999999999988888777
Q ss_pred HHHHHHHHHHHHHHHhh---CCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHH
Q 013144 339 GFFVILSWMPIYFNFVY---HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG 415 (449)
Q Consensus 339 ~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (449)
.+..+...++.|++..+ +.+....|++.+...+..++...+.+++.+|+|.| ..+.++..++.+=.++
T Consensus 235 ~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k---------~~Lllag~i~~iRi~~ 305 (412)
T PF01306_consen 235 IYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK---------NLLLLAGVIMAIRIIG 305 (412)
T ss_dssp HHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH---------hHHHHHHHHHHHHHHH
Confidence 88888777888887643 23445678888888888899999999999999998 4555555667777777
Q ss_pred hhcccchhH
Q 013144 416 LTAAKSPVM 424 (449)
Q Consensus 416 ~~~~~~~~~ 424 (449)
.+..++++.
T Consensus 306 ~~~~~~~~~ 314 (412)
T PF01306_consen 306 SGFATNPWV 314 (412)
T ss_dssp HHT--SHHH
T ss_pred HhhhcchHH
Confidence 777777764
No 111
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.75 E-value=1e-16 Score=155.93 Aligned_cols=294 Identities=12% Similarity=-0.025 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcC-----CchHHHHHHHHH
Q 013144 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG-----GKIIMAWGVALW 174 (449)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~l~~~~~~~ 174 (449)
.+.++...++..+..........+.+.+++|+++++++...+...+...+-.+ +|+++||++ ||+.++++.++.
T Consensus 27 ~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 27 VLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHH
Confidence 44455556666676644445566667778999999999999999999999766 999999998 778888887776
Q ss_pred H-HHHHHhhhccchhH-HHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHH---HHHHHHhhhhhhHhHHHHHHHHH
Q 013144 175 S-LATFLTPWAADTSL-LALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARA---VAIAMGGFTSGNAIGLVLSPILM 249 (449)
Q Consensus 175 ~-i~~~~~~~~~~~~~-~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~---~~~~~~~~~~G~~~g~~l~~~l~ 249 (449)
+ +.....+.. ++. ....+..++.+++.+...+++.++..|..+ +++... .++.....++|.++|+.++|.+.
T Consensus 106 ~~~~~~~l~~~--~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~ 182 (468)
T TIGR00788 106 SAILYGLLPGK--VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL 182 (468)
T ss_pred HHHHHHhcccc--cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 3 443334433 444 344458899999999999999999999998 555443 33444445689999999999999
Q ss_pred hhhCchHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHH
Q 013144 250 SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPD-RHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWS 328 (449)
Q Consensus 250 ~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (449)
+.++|+..|++.+++.++..+.. +..+|++. ..++..+++.......... .....++.....++.+++|.++.
T Consensus 183 ~~~~~~~~f~~~a~l~ll~~~~~-~~~~E~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~l~~~~i~~ 256 (468)
T TIGR00788 183 DKTLTRILFLITAALLLLQLFVS-NLSKERRAFVRPRIGTYLEMNMALLTLG-----VLANVKVQILGLRGAIQLLEIAK 256 (468)
T ss_pred HhcCcchHHHHHHHHHHHHHHHH-Hhcccccccccccccccchhhhhhhhhh-----HHHHHHHHHHHHHHHHhcHHHHH
Confidence 99999999999888877764443 44455431 1111000000000000000 00000011124556677888877
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhH
Q 013144 329 IIVANAM-HSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (449)
Q Consensus 329 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 407 (449)
..+..++ ...........+ .+.++..|+++.+.|......+++.+++..+.+++.+|++.| .++.++.+
T Consensus 257 ~l~fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r---------~~l~~~~~ 326 (468)
T TIGR00788 257 PLIFIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR---------LLFGVTTL 326 (468)
T ss_pred HHHHHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH---------HHHHHHHH
Confidence 6555555 221111111111 122345799999999999999988899988888888888766 44455555
Q ss_pred HHHHHH
Q 013144 408 APGIAL 413 (449)
Q Consensus 408 ~~~~~~ 413 (449)
..+++.
T Consensus 327 l~~~~~ 332 (468)
T TIGR00788 327 LYTLSS 332 (468)
T ss_pred HHHHHH
Confidence 444443
No 112
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.74 E-value=1.8e-19 Score=175.76 Aligned_cols=288 Identities=16% Similarity=0.161 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhh
Q 013144 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (449)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~ 182 (449)
.+++..+...+........+..+.++|+++.++.|++.+.+-++..+..++..++.+|..|-+.+-++.+++++|+++++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHh
Confidence 34444444466667778889999999999999999999999999999999999999998888999999999999999865
Q ss_pred hcc------------------------c------------------------hhHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 013144 183 WAA------------------------D------------------------TSLLALLAMRAVVGLAEGVALPAMNNMV 214 (449)
Q Consensus 183 ~~~------------------------~------------------------~~~~~l~~~r~l~G~g~g~~~~~~~~~i 214 (449)
+-. + .-++.++++.++.|+|....++.+.+|+
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 420 0 0145688999999999999999999999
Q ss_pred hhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh---------------------C-chHHHHHHHHHHHHHHHHH
Q 013144 215 ARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA---------------------G-IFGPFVIFGLSGFLWVLVW 272 (449)
Q Consensus 215 ~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~---------------------g-wr~~f~~~~~~~~~~~~~~ 272 (449)
-|..++++-+..+|+..+...+|.++|.++++.+...+ | |...|++.+.+.++..+..
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl 246 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL 246 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998875421 2 6667777777777777766
Q ss_pred HHhcCCCCCCCCCCCHHHHHHHHHhcc-CccccCC------CCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHH
Q 013144 273 LSATSSTPDRHPQISKYELEYILREKQ-KPLLMGN------KHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILS 345 (449)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (449)
++++++-|...+..+.++.++...... ......+ ...-+......+++++||.+....+...+......++.+
T Consensus 247 ~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~t 326 (539)
T PF03137_consen 247 FFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFAT 326 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Confidence 666555554411111111110000000 0000000 112344556778999999999999999999999999999
Q ss_pred HHHHHHHHhhCCcccchhhHhhHHHH-HHHHHHHHHHHHHHHHHHh
Q 013144 346 WMPIYFNFVYHIDLRQASWFSAVPWS-VMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 346 ~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~ 390 (449)
+.|.|++..++.++.+++++.....+ +.++|.+++|++.+|++-+
T Consensus 327 F~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~ 372 (539)
T PF03137_consen 327 FLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLS 372 (539)
T ss_dssp ----------------------------------------------
T ss_pred HHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCc
Confidence 99999999999999999988876665 5678889999999998654
No 113
>PRK11462 putative transporter; Provisional
Probab=99.73 E-value=6.7e-15 Score=143.14 Aligned_cols=245 Identities=13% Similarity=0.075 Sum_probs=177.9
Q ss_pred hhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhh----cCCch-HHHHHHHHHHHHHHHhhhccc----hhHHH
Q 013144 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGKI-IMAWGVALWSLATFLTPWAAD----TSLLA 191 (449)
Q Consensus 121 ~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~-~l~~~~~~~~i~~~~~~~~~~----~~~~~ 191 (449)
....+.+.+|+++..+|.+..+.-+--++.-|+.|.++|| +|||| .++++.+..+++.+++...+. .....
T Consensus 32 l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y 111 (460)
T PRK11462 32 MMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIY 111 (460)
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 4555667889999999999999999999999999999996 78765 555676778877776654421 11556
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhccC-cchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh-------CchHHHHHHHH
Q 013144 192 LLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-------GIFGPFVIFGL 263 (449)
Q Consensus 192 l~~~r~l~G~g~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~-------gwr~~f~~~~~ 263 (449)
+++.-++..++.......-.++..|..+ +++|.+..++...+..+|..+++.+...+.+.. ||+....+.++
T Consensus 112 ~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~i 191 (460)
T PRK11462 112 AAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSV 191 (460)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 6777777888888888888999999997 789999999999999999888888776655443 47777777777
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHH
Q 013144 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (449)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (449)
++++..++.+...+|.++.++ ++.+.+..++..++||.++.+....++........
T Consensus 192 i~~i~~~i~~~~~kE~~~~~~------------------------~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~ 247 (460)
T PRK11462 192 VAFMMLAFCFFTTKERVEAPP------------------------TTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVR 247 (460)
T ss_pred HHHHHHHHHHhcceeccCCCc------------------------cCCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 666655555554444322110 11123346678888988877776666666665555
Q ss_pred HHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
......|.+...|.. ...+.+.....++++++.++++++.||+++|
T Consensus 248 ~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk 293 (460)
T PRK11462 248 GGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWKCKV 293 (460)
T ss_pred HhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 555555555554433 3345566677788899999999999999887
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.71 E-value=1.5e-14 Score=135.70 Aligned_cols=272 Identities=16% Similarity=0.137 Sum_probs=213.3
Q ss_pred hhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhh----cCCc-hHHHHHHHHHHHHHHHhhhccc----hhHHH
Q 013144 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGK-IIMAWGVALWSLATFLTPWAAD----TSLLA 191 (449)
Q Consensus 121 ~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr-~~l~~~~~~~~i~~~~~~~~~~----~~~~~ 191 (449)
++-.+.+.+|+++..+|.+..+--+--++.-|+.|.++|| +||+ +.++.+.+..++.+.++-.+++ .+...
T Consensus 35 Ll~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~y 114 (467)
T COG2211 35 LLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIY 114 (467)
T ss_pred HHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHH
Confidence 4455667789999999999999999999999999999996 7765 4677777888888888877742 35667
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhccC-cchhhHHHHHHHHhhhhhhHhHHHHHHHHHh-------hhCchHHHHHHHH
Q 013144 192 LLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMS-------QAGIFGPFVIFGL 263 (449)
Q Consensus 192 l~~~r~l~G~g~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~-------~~gwr~~f~~~~~ 263 (449)
.++...+.+++.......-.++.+|+.+ ++||.+..++-..+.++|..+...+...+.. ..||+...++.++
T Consensus 115 a~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~v 194 (467)
T COG2211 115 ALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGV 194 (467)
T ss_pred HHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHH
Confidence 7888899999999888888999999985 7899999999999999998777777666654 3478888888888
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHH
Q 013144 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (449)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (449)
++++..+.+++-.+|.+.+.... ++..+.+....+..+++||.+...++..++...+.+..
T Consensus 195 i~~i~~l~~~~~v~ER~~~~~~~-------------------~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~ 255 (467)
T COG2211 195 IGVILLLFCFFNVKERVVETQPT-------------------KTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIR 255 (467)
T ss_pred HHHHHHHHHHHHhhcccCccccC-------------------cccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 88888888887776665432211 11122333345567889999999999888888888888
Q ss_pred HHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhccc
Q 013144 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK 420 (449)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (449)
......|.+..+|.+.............+.+++.++..++.+|+|+| .+...+.++..++.+++.+.+
T Consensus 256 ~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk---------~~~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 256 GSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK---------KLFLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred hhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH---------HHHHHHHHHHHHHHHHHHhhc
Confidence 88889999888888888888888888888888899999999999998 444555555555555555554
No 115
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.69 E-value=7.6e-15 Score=136.47 Aligned_cols=176 Identities=15% Similarity=0.242 Sum_probs=144.8
Q ss_pred HHHHHHHHHHHHHhHhhhh-hhhhhhhhhcC----CCchhhHHHHHHHHHHHHHhhccchhhhhhc-CCchHHHHHHHHH
Q 013144 101 VSMLALALALCNADRVVMS-VAIVPLSLAHG----WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALW 174 (449)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~----~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~ 174 (449)
+..+....+..-+..+-+. ...-++..+++ .+++++.-+.++|..-.-+..+++|+++||+ |+|+++..+.+++
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~ 102 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILM 102 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 3445555555555544433 33444444444 9999999999999999999999999999995 9999999999999
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcch--hhHHHHHHHHhhhhhhHhHHHHHHHHHhhh
Q 013144 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTE--RARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (449)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~--rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 252 (449)
.+|.++.+.....+...++++-++.++|.|..-+...++++|.+|+++ |-..++++.++.++|..++|.+.+++.+.+
T Consensus 103 ~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~ 182 (498)
T COG3104 103 AIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY 182 (498)
T ss_pred HHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh
Confidence 999999887711268889999999999999999999999999998643 888999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhc
Q 013144 253 GIFGPFVIFGLSGFLWVLVWLSAT 276 (449)
Q Consensus 253 gwr~~f~~~~~~~~~~~~~~~~~~ 276 (449)
||...|...++-..+.++..++..
T Consensus 183 g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 183 GWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999998877766666555544
No 116
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.69 E-value=8.6e-14 Score=134.30 Aligned_cols=242 Identities=18% Similarity=0.116 Sum_probs=186.7
Q ss_pred hhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHH-HHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHH
Q 013144 134 SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAW-GVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNN 212 (449)
Q Consensus 134 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~-~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~ 212 (449)
+..++..++..+..++..|+.|.++|+-|+||.++. ..++..+.+.+..+....+++...+.-++.-++.+.......+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455788899999999999999999999997765544 4445555666666653356666666677777788888899999
Q ss_pred HHhhccCcchh--------------------------hHHHHHHHHhhhhhhHhHHHHHHHHHhh--------hCchHHH
Q 013144 213 MVARWFPQTER--------------------------ARAVAIAMGGFTSGNAIGLVLSPILMSQ--------AGIFGPF 258 (449)
Q Consensus 213 ~i~~~~~~~~r--------------------------g~~~~~~~~~~~~G~~~g~~l~~~l~~~--------~gwr~~f 258 (449)
++.|..+++++ ++..+.-.....+|.++.-.+.-.+... .+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999998888 8999998888889988887776665432 2358888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHH
Q 013144 259 VIFGLSGFLWVLVWLSATSSTPDRHPQ-ISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHS 337 (449)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (449)
.+.++.-++..+..++..|+.|+.++. ....-..... +..+..+|++.|.|.+....+..++..
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~---------------~~l~~t~k~~~~~~~~~~fLia~~l~~ 294 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGF---------------KRLWRTFKEIRKLRQLFLFLIAYFLYS 294 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHH---------------HHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 888888888888778887777652211 1111111000 112235667777888999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
-+...+......|.++.+|++..+...+.....+.+++|.++.|++.||+|.|
T Consensus 295 dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k 347 (477)
T PF11700_consen 295 DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPK 347 (477)
T ss_pred HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999999999999987
No 117
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.68 E-value=3.2e-16 Score=126.70 Aligned_cols=137 Identities=21% Similarity=0.366 Sum_probs=124.1
Q ss_pred HHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccC
Q 013144 140 QSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFP 219 (449)
Q Consensus 140 ~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~ 219 (449)
.+.+.++..++.++.|++.||+|||+.+..+..+..++.++.... ++++.+.+.+++.|++.+...+....++.|.+|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS--SNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 455678889999999999999999999999999999999888888 899999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhcCC
Q 013144 220 QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSS 278 (449)
Q Consensus 220 ~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 278 (449)
+++|++..++......+|..+++.+++.+.+..+|++.|++.++..++..+...+..||
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999998999999999888777766666665543
No 118
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.68 E-value=1.5e-15 Score=146.16 Aligned_cols=160 Identities=14% Similarity=0.072 Sum_probs=133.9
Q ss_pred hhhhhhhhcCCC--------chhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccc--hhHH
Q 013144 121 AIVPLSLAHGWS--------RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAAD--TSLL 190 (449)
Q Consensus 121 ~~~~l~~~~~~~--------~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~--~~~~ 190 (449)
..+...++.|.+ ..+.+.+.++..++..++.++.|+++||+|+|+++.++.++.+++..+...... .+++
T Consensus 230 ~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~ 309 (418)
T TIGR00889 230 FGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYA 309 (418)
T ss_pred hHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHH
Confidence 334445555544 366799999999999999999999999999999999999999988776665311 1356
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHH-HhhhhhhHhHHHHHHHHHhh------hCchHHHHHHHH
Q 013144 191 ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQ------AGIFGPFVIFGL 263 (449)
Q Consensus 191 ~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~-~~~~~G~~~g~~l~~~l~~~------~gwr~~f~~~~~ 263 (449)
.+++.+++.|++.+...+....++.|++|+++|++++|+.+ ....+|.++||+++|.+.++ +||++.|++.++
T Consensus 310 ~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~ 389 (418)
T TIGR00889 310 LLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAG 389 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHH
Confidence 77888999999999888999999999999999999999997 67889999999999999987 469999999888
Q ss_pred HHHHHHHHHHHhcCCCC
Q 013144 264 SGFLWVLVWLSATSSTP 280 (449)
Q Consensus 264 ~~~~~~~~~~~~~~~~~ 280 (449)
+.++..++.+++.+|+.
T Consensus 390 ~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 390 YIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHHHHHhCCcc
Confidence 88887777777777653
No 119
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.67 E-value=2.9e-14 Score=134.13 Aligned_cols=257 Identities=14% Similarity=0.143 Sum_probs=185.2
Q ss_pred hHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhh--cCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCC-chHHHHHHH
Q 013144 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLA--HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KIIMAWGVA 172 (449)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~ 172 (449)
.+|+.+.+..+..++......++.+..-+..++ .+.+.+..||+.++..++.+++++.+|++..|.+. |+.++.+.+
T Consensus 31 t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~i 110 (488)
T KOG2325|consen 31 TNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFL 110 (488)
T ss_pred CchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHH
Confidence 347778888888888888877777666555555 77888999999999999999999999999999997 889999999
Q ss_pred HHHHHHHHh-hhc--cchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHH
Q 013144 173 LWSLATFLT-PWA--ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (449)
Q Consensus 173 ~~~i~~~~~-~~~--~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~ 249 (449)
+..+|+++. ++. +....+.++++|++.|+|.|. .....+|+++-...++|.++++....+..+|.++||.++..+.
T Consensus 111 i~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 111 IAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 999999987 333 223788999999999999776 6778999999888899999999999999999999999988775
Q ss_pred hhh--C-----------chHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchh
Q 013144 250 SQA--G-----------IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPP 316 (449)
Q Consensus 250 ~~~--g-----------wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (449)
... | +..+-|+.+++.++.+++..+..+|.+++..+.+.++.++.. .+.++.+..+.+
T Consensus 190 ~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~d 260 (488)
T KOG2325|consen 190 PLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEEEK---------SDIEKVKKPKLD 260 (488)
T ss_pred hhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchhhc---------cchhhhccCChh
Confidence 421 2 334667788888888887777777776554322111110000 000011111111
Q ss_pred HHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhH
Q 013144 317 FRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAV 368 (449)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~ 368 (449)
+ +..+.+.+..+...+......+..+.+....++++..++....+.
T Consensus 261 ~------~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi 306 (488)
T KOG2325|consen 261 W------VAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGI 306 (488)
T ss_pred H------HHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhh
Confidence 1 223445555556666666666777777777788877776555444
No 120
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.66 E-value=7.3e-14 Score=125.50 Aligned_cols=244 Identities=16% Similarity=0.120 Sum_probs=171.7
Q ss_pred hhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 013144 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (449)
Q Consensus 117 ~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 196 (449)
..+|..-.+-+++|.++.|++.+........++..++.|.++||+|||+.-++.+++.+++++.- .. ++++.++++|
T Consensus 52 LQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k-~~--~~~~~L~~GR 128 (354)
T PF05631_consen 52 LQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK-HS--SNYPVLLLGR 128 (354)
T ss_pred hhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-hc--cccHHHHHHH
Confidence 34444445557899999999999999999999999999999999999999999999999998754 44 7999999999
Q ss_pred HHHhhhhhhhhhHHHHHHh-hc----cCcchhhHHHHHHH-HhhhhhhHhHHHHHHHHHhhhCc--hHHHHHHHHHHHHH
Q 013144 197 AVVGLAEGVALPAMNNMVA-RW----FPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQAGI--FGPFVIFGLSGFLW 268 (449)
Q Consensus 197 ~l~G~g~g~~~~~~~~~i~-~~----~~~~~rg~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gw--r~~f~~~~~~~~~~ 268 (449)
++.|++......+-.++.. |. +|++..+..++... ...++-.+++.+++..+.+..|. ..+|....++.++.
T Consensus 129 vlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~ 208 (354)
T PF05631_consen 129 VLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVA 208 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 9999999999888877664 33 34344444444444 33344456666667777776654 78888877777776
Q ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHH-HHH
Q 013144 269 VLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVIL-SWM 347 (449)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 347 (449)
.+++....+|+..+..+..+ ..+.....++.+.++|+++.+.++..+.-...+.+. .|.
T Consensus 209 ~~~I~~~W~ENyg~~~~~~~--------------------~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWt 268 (354)
T PF05631_consen 209 AVLILKTWPENYGDTSSSSS--------------------LSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWT 268 (354)
T ss_pred HHHHHhcccccCCCcccccc--------------------hHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeee
Confidence 66666655655433211110 011112345677888999888887777776666655 555
Q ss_pred HHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHH
Q 013144 348 PIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM 386 (449)
Q Consensus 348 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 386 (449)
|..- . +-....-|++++.+.+..++|+.+..++..+
T Consensus 269 PaL~-~--~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 269 PALD-P--DDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred ceec-C--CCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5543 2 1223457888888888888888777655443
No 121
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.64 E-value=1.7e-13 Score=125.10 Aligned_cols=242 Identities=14% Similarity=0.081 Sum_probs=179.1
Q ss_pred hhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcC-----Cch-HHHHHHHHHHHHHHHhhhc----cc-------h
Q 013144 125 LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG-----GKI-IMAWGVALWSLATFLTPWA----AD-------T 187 (449)
Q Consensus 125 l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~-~l~~~~~~~~i~~~~~~~~----~~-------~ 187 (449)
+..|++++....+.+.+...+... ..+.+|+.+|+.+ ||. -+..|.+..+.+..+.+++ .. +
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 456899999999999998887765 5888899999998 775 4455555666555554433 11 1
Q ss_pred h-HH--HHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchH---HHHHH
Q 013144 188 S-LL--ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG---PFVIF 261 (449)
Q Consensus 188 ~-~~--~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~---~f~~~ 261 (449)
. .+ ...+...+.|+|.+...+...++++|..|+++|+++.++.....-+|.+++..+.+.+.+.+.-.- .+...
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 2 22 344556789999999999999999999999999999999999999999999999999887665322 22223
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHH
Q 013144 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (449)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (449)
+++.++..++..+-. |++..+.. ..+++++......++++..+|+...+.+..++...+++
T Consensus 165 a~i~~~l~~ia~wg~-E~r~~~~~------------------~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~ 225 (403)
T PF03209_consen 165 ALIALLLNLIALWGQ-EPRRSRRA------------------AAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFF 225 (403)
T ss_pred HHHHHHHHHHHHHhc-ccCCcccc------------------cCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHH
Confidence 333333333333322 22111111 01233445556678888899999998888888888888
Q ss_pred HHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHH
Q 013144 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM 386 (449)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 386 (449)
.-...+-.|-.+++|++..+...+....+.+.+++..+.|++..|
T Consensus 226 ~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~ 270 (403)
T PF03209_consen 226 MQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSR 270 (403)
T ss_pred hhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 888999999999999999999999999999999999999988763
No 122
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.64 E-value=2.7e-14 Score=137.10 Aligned_cols=156 Identities=19% Similarity=0.175 Sum_probs=132.1
Q ss_pred hhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHh
Q 013144 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (449)
Q Consensus 121 ~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G 200 (449)
..+.+.++.|. .+.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++.++. ++.+.+++..++.|
T Consensus 238 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G 313 (399)
T PRK05122 238 FITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA--PSPWMALIGAALTG 313 (399)
T ss_pred HHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHH
Confidence 33444445555 345677788899999999999999999999999999999888888888777 88888888999999
Q ss_pred hhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhcCCCC
Q 013144 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (449)
Q Consensus 201 ~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (449)
++.+...+.....+.|..|+++|+++.+++.....+|..+++.+.+.+.+..||++.|++.+.+.++..+..++..++.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 314 FGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99998888888888899999999999999999999999999999999999999999999988887776666665544333
No 123
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.63 E-value=5.5e-15 Score=140.60 Aligned_cols=149 Identities=15% Similarity=0.077 Sum_probs=128.3
Q ss_pred hhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH
Q 013144 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVV 199 (449)
Q Consensus 120 ~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~ 199 (449)
...+++.++++.++.+.+++.+.+.++..++.++.|++.||+|||+.+.++.++..++.++..+.+..+...+++..++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALV 305 (377)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHH
Confidence 34455667889999999999999999999999999999999999999999999999888877776212333455667888
Q ss_pred hhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHH
Q 013144 200 GLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLW 268 (449)
Q Consensus 200 G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~ 268 (449)
|++.+...+....++.|.+|+++|+++.|+......+|..++|.+.+.+.+..||++.|++.+++.++.
T Consensus 306 g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 306 FFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 998888888888999999999999999999999999999999999999999999999999887766553
No 124
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.63 E-value=5.3e-15 Score=142.93 Aligned_cols=151 Identities=13% Similarity=0.094 Sum_probs=131.9
Q ss_pred hcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhh
Q 013144 128 AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVAL 207 (449)
Q Consensus 128 ~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~ 207 (449)
+.+.+..+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.+++ ++.+.+++.+++.|++.+...
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~--~~~~~~~~~~~l~g~~~~~~~ 333 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA--TGPLEVSILKLLHAFEVPFLL 333 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHH
Confidence 346677789999999999999999999999999999999999999999998888888 899999999999999998888
Q ss_pred hHHHHHHhhccCcchhhHHHHH-HHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhcCCCC
Q 013144 208 PAMNNMVARWFPQTERARAVAI-AMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (449)
Q Consensus 208 ~~~~~~i~~~~~~~~rg~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (449)
+....++.|.+|++.|+...+. ++....+|.++++.+.|++.+..||+..|.+.+++.++..++.++..++++
T Consensus 334 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 334 VGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 8888999999999999887665 667788999999999999999999999999988887766666665554433
No 125
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.62 E-value=4.2e-14 Score=135.35 Aligned_cols=153 Identities=11% Similarity=0.014 Sum_probs=127.6
Q ss_pred hhhhh-hhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 013144 120 VAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAV 198 (449)
Q Consensus 120 ~~~~~-l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l 198 (449)
...|. +++++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.+...+........ ++.+.+++.+++
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~l 314 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMA--HSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHH
Confidence 34454 456789999999999888888888899999999999999998887776666555555555 778888889999
Q ss_pred HhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHh
Q 013144 199 VGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (449)
Q Consensus 199 ~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (449)
.+++.|...+....+..|.+| ++|+++.++++...++|..+|+.+++.+.+.+||+..|++.+++.++..+..++.
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 999888877888888999997 5699999999999999999999999999999999999998887777766655544
No 126
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.60 E-value=4.1e-14 Score=142.68 Aligned_cols=140 Identities=17% Similarity=0.166 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhh
Q 013144 137 GIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVAR 216 (449)
Q Consensus 137 g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~ 216 (449)
.+...+..++..++.++.|+++||+|||++++++.++.+++.++.++. ++...+++.+++.|++.+..++...++++|
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~--~s~~~ll~~~~l~g~~~~~~~~~~~a~~aE 675 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG--NSESAMIALLCLFGGLSIAAWNALDVLTVE 675 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344567778999999999999999999999999999999999998888 888888888999999888889999999999
Q ss_pred ccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhcCCCC
Q 013144 217 WFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (449)
Q Consensus 217 ~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (449)
++|.++|++++|+..+...+|.++||++++.+.+. +...+|++.+++.++.+++.++ +||+.
T Consensus 676 l~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET~ 737 (742)
T TIGR01299 676 LYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDTR 737 (742)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCCc
Confidence 99999999999999999999999999999988764 4567777777776665555554 36544
No 127
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.60 E-value=7.6e-14 Score=133.02 Aligned_cols=151 Identities=13% Similarity=0.021 Sum_probs=134.2
Q ss_pred hhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 013144 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (449)
Q Consensus 117 ~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 196 (449)
.+....|.+.+++|.++.++|++.+...++..++.++.+++.||+|+|+.+.++.++..+..++.++. ++.+.+++.+
T Consensus 223 ~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~q 300 (382)
T TIGR00902 223 AYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI--EAFPLIFLLQ 300 (382)
T ss_pred HHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH--hhHHHHHHHH
Confidence 34445566667799999999999999999999999999999999999999999999999999999888 9999999999
Q ss_pred HHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHH-HhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHH
Q 013144 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLV 271 (449)
Q Consensus 197 ~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 271 (449)
+++|+..|...+....++.+. |+++|+...++++ ...++|..+|+.++|.+.+++|+ ..|++.++++++..++
T Consensus 301 ~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 301 ILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 999999999999999999998 9999999999986 57789999999999999999986 6677777777655443
No 128
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.60 E-value=4.2e-14 Score=136.12 Aligned_cols=156 Identities=19% Similarity=0.133 Sum_probs=130.4
Q ss_pred hhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 013144 118 MSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (449)
Q Consensus 118 ~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 197 (449)
.....|.+.++.|.++.+.+++.+.+.++..++.++.|++.||+|||+.+..+.+..+++.++..+. ++.+.+.+..+
T Consensus 239 ~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 316 (406)
T PRK11551 239 LLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAA--PSFAGMLLAGF 316 (406)
T ss_pred HHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc--CcHHHHHHHHH
Confidence 3344677777889999999999999999999999999999999999999988777777777766666 77788888888
Q ss_pred HHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC-chHHHHHHHHHHHHHHHHHHHh
Q 013144 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLVWLSA 275 (449)
Q Consensus 198 l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~ 275 (449)
+.|++.+...+...+++.|.+|+++|++.+|+.+....+|..+||.++|.+.++.+ |...++..+...++..+..++.
T Consensus 317 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 317 AAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888999999999999999999999999999999999999999988754 5556666555555554544444
No 129
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.60 E-value=1.9e-13 Score=134.62 Aligned_cols=165 Identities=13% Similarity=0.126 Sum_probs=124.2
Q ss_pred hhhhhhhhhh-hhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHH-hhhccchhHHHHHH
Q 013144 117 VMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL-TPWAADTSLLALLA 194 (449)
Q Consensus 117 ~~~~~~~~l~-~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~-~~~~~~~~~~~l~~ 194 (449)
......|.+. +++|.+..+.++..+...++..++.++.|+++||+|||+++.++.++..++.+. ......++...+++
T Consensus 268 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (490)
T PRK10642 268 MLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFA 347 (490)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 3444556644 567888888888888899999999999999999999999988887654443332 11111156778888
Q ss_pred HHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh-CchHHHHHHHHHHHHHHHHHH
Q 013144 195 MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-GIFGPFVIFGLSGFLWVLVWL 273 (449)
Q Consensus 195 ~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~ 273 (449)
++++.|++.+........++.|.+|++.|+.++++......++..++|.+.+++.+.. +|+.++++..+.+++.++..+
T Consensus 348 ~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 427 (490)
T PRK10642 348 GLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV 427 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 9999999888777788889999999999999999855556666788999999888765 478777776666666555544
Q ss_pred HhcCCCCCC
Q 013144 274 SATSSTPDR 282 (449)
Q Consensus 274 ~~~~~~~~~ 282 (449)
+ .||+|++
T Consensus 428 ~-~pes~~~ 435 (490)
T PRK10642 428 T-MKETANR 435 (490)
T ss_pred H-hccccCC
Confidence 4 4777654
No 130
>PRK12382 putative transporter; Provisional
Probab=99.59 E-value=1.1e-13 Score=132.56 Aligned_cols=152 Identities=18% Similarity=0.217 Sum_probs=130.9
Q ss_pred hhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHh
Q 013144 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (449)
Q Consensus 121 ~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G 200 (449)
..+...++.+.+ +.++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+. ++.+.+++..++.|
T Consensus 238 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g 313 (392)
T PRK12382 238 FVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA--PTAWVALAGAALTG 313 (392)
T ss_pred HHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc--ccHHHHHHHHHHHH
Confidence 344444555654 35667777888889999999999999999999999999999988888777 78888888999999
Q ss_pred hhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhc
Q 013144 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (449)
Q Consensus 201 ~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 276 (449)
++.+...+...+.+.|.+|+++||++.++.+....+|..+||.+.+.+.++.||++.|++.+++.++..++.++..
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 314 AGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 9999888888899999999999999999999999999999999999999999999999998888777666665543
No 131
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.58 E-value=3.7e-14 Score=136.61 Aligned_cols=156 Identities=17% Similarity=0.149 Sum_probs=130.8
Q ss_pred hhhhhhhhhhcCCCch----hhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHH
Q 013144 119 SVAIVPLSLAHGWSRS----FSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLA 194 (449)
Q Consensus 119 ~~~~~~l~~~~~~~~~----~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~ 194 (449)
.+..+.+..+.+.+.. ..+.+.++..++..++.+..|++.||+|||+.+..+..+..++.+...+. ++.+.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 316 (408)
T PRK09874 239 APILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV--QTPLQLGI 316 (408)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh--ccHHHHHH
Confidence 3444444444332322 34666677788888999999999999999999999999888888777777 78888899
Q ss_pred HHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 013144 195 MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (449)
Q Consensus 195 ~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 274 (449)
.+++.|++.+...+...+++.+..|+++||+.+++......+|..+||.+++.+.+..||++.|++.+++.++..+..++
T Consensus 317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 317 LRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888777666655
Q ss_pred hc
Q 013144 275 AT 276 (449)
Q Consensus 275 ~~ 276 (449)
..
T Consensus 397 ~~ 398 (408)
T PRK09874 397 SL 398 (408)
T ss_pred HH
Confidence 44
No 132
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.58 E-value=8.5e-14 Score=130.97 Aligned_cols=163 Identities=25% Similarity=0.327 Sum_probs=144.8
Q ss_pred HHHHHhHhhhhhhhhhhhhhc-CCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCch-HHHHHHHHHHHHHHHhhhccc
Q 013144 109 ALCNADRVVMSVAIVPLSLAH-GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKI-IMAWGVALWSLATFLTPWAAD 186 (449)
Q Consensus 109 ~~~~~~~~~~~~~~~~l~~~~-~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~i~~~~~~~~~~ 186 (449)
+.............+.+.++. |.++.+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.++....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-- 262 (352)
T cd06174 185 FLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA-- 262 (352)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh--
Confidence 333344444555566666554 899999999999999999999999999999999999 9999999999999999888
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHH
Q 013144 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGF 266 (449)
Q Consensus 187 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~ 266 (449)
++.+.+++..++.|++.+...+....++.|..|+++|++.+++......+|..+++.+.+.+.+..+|++.+++.+++.+
T Consensus 263 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~ 342 (352)
T cd06174 263 PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALAL 342 (352)
T ss_pred ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999988887
Q ss_pred HHHHHHH
Q 013144 267 LWVLVWL 273 (449)
Q Consensus 267 ~~~~~~~ 273 (449)
+..+...
T Consensus 343 i~~i~~~ 349 (352)
T cd06174 343 LAALLLL 349 (352)
T ss_pred HHHHHhe
Confidence 7666543
No 133
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.57 E-value=1.6e-13 Score=132.57 Aligned_cols=161 Identities=14% Similarity=0.060 Sum_probs=139.2
Q ss_pred hhhhhhhhhh-cCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 013144 119 SVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (449)
Q Consensus 119 ~~~~~~l~~~-~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 197 (449)
....|.+.++ +|.++.+.|++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+. ++.+.+.++.+
T Consensus 243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 320 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM--PMWILAVLCLA 320 (417)
T ss_pred HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc--chHHHHHHHHH
Confidence 3445666566 89999999999999999999999999999999888888888888888888887777 88888888899
Q ss_pred HHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhcC
Q 013144 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATS 277 (449)
Q Consensus 198 l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 277 (449)
+.|++.+...+...+++.|..|++.||++++++.....+|..+|+.+.|.+.+..|++..+++.+...++..++.....+
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 99999888788888999999999999999999999999999999999999999999999998888777666666666555
Q ss_pred CCCC
Q 013144 278 STPD 281 (449)
Q Consensus 278 ~~~~ 281 (449)
+.++
T Consensus 401 ~~~~ 404 (417)
T PRK10489 401 ELRR 404 (417)
T ss_pred cccc
Confidence 5443
No 134
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.56 E-value=2.9e-13 Score=128.78 Aligned_cols=148 Identities=13% Similarity=0.048 Sum_probs=126.7
Q ss_pred hhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhh
Q 013144 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAE 203 (449)
Q Consensus 124 ~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~ 203 (449)
.+.+++|.++.+.+++.+...+...++.++.|++.||+|||+++.++.++..+......+. ++.+.+++.+++.|++.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~ 302 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAAD--NSLWALLMLQLLNAIFI 302 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 3457789999999999888888888889999999999999999988887766666555566 78888888999999999
Q ss_pred hhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 013144 204 GVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (449)
Q Consensus 204 g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 274 (449)
+...+....++.|..|+ +++.++++......+|..++|.+++.+.+..||+..|++.++..++..++..+
T Consensus 303 g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 303 GILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 98888889999999874 66799999999999999999999999999999999999988877766655443
No 135
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.54 E-value=7.9e-13 Score=126.08 Aligned_cols=149 Identities=15% Similarity=0.179 Sum_probs=124.2
Q ss_pred hhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHh
Q 013144 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (449)
Q Consensus 121 ~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G 200 (449)
.+|.+.++.|.++.+.+++.+...++..+++++.|++.||+|+|+++..+..+..++.+... .. .......++.|
T Consensus 222 ~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~----~~-~~~~~~~~l~g 296 (381)
T PRK03633 222 LMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML----SQ-AAMAPALFILG 296 (381)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh----hh-HHHHHHHHHHH
Confidence 45666677899999999999999999999999999999999999999988888877665442 11 23345667788
Q ss_pred hhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 013144 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (449)
Q Consensus 201 ~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 274 (449)
++.+...|...+++.|..|+++++...+......++|..+||.++|.+.++.||++.|++.+.+.++..+..+.
T Consensus 297 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 297 AAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 87777889999999999998888888888888999999999999999999999999999988877765544433
No 136
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.54 E-value=9.6e-13 Score=125.65 Aligned_cols=305 Identities=19% Similarity=0.164 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCch-hhHHHHH----HHHHHHHHhhccchhhhhhcCCchHHHHHHH
Q 013144 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRS-FSGIVQS----SFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (449)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~g~~~s----~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 172 (449)
+.+.....+-.+..++.........+...+.++.+.. ..+.... ...+...+.++..|.++||+|||..+....+
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~ 100 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLF 100 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHH
Confidence 3444555555555555555556666666665543222 2233333 3367788899999999999999999999999
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHHHhhhh--hhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh
Q 013144 173 LWSLATFLTPWAADTSLLALLAMRAVVGLAE--GVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (449)
Q Consensus 173 ~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~--g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~ 250 (449)
...+..+...+. . +|.++ +.|+.. +.....+.++++|....++|...+|+.......+..++|.+++.+..
T Consensus 101 ~~~l~~~~~~~~--~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~ 173 (463)
T KOG2816|consen 101 GTILPALCLLFQ--G-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK 173 (463)
T ss_pred HHHHhHHHHHHH--H-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 999998888775 3 44444 444433 35577888999999999999999999999999999999999999999
Q ss_pred hhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHH
Q 013144 251 QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSII 330 (449)
Q Consensus 251 ~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (449)
..|.-.+|.+.++..++..+..++..||+..++++.+... ...... .....+..+.....+..-.+|..+.++
T Consensus 174 ~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~l~l~ 246 (463)
T KOG2816|consen 174 FLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATL-----RELTPG--SLDSSHVADAFQSLTKVGPDRLLLLLL 246 (463)
T ss_pred hcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccc-----cccCCC--cccchhhhhhhhhhcccCCCccchHHH
Confidence 9999999999999998888888888888765543321000 000000 000001111111112222234555555
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHH-HHHHHHHHhCCCchhhHHHHHHHHhHH
Q 013144 331 VANAMHSWGFFVILS-WMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGG-LLSDMLIQRGTSVTLTRKILQSIGFIA 408 (449)
Q Consensus 331 ~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~g~~~~~~~~~~~~~~~~~~~~ 408 (449)
+..++.......-.. ..+.|+...+++++.+.+.+.+.......+++++.. .+...++.+ .++..++..
T Consensus 247 l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~---------~~i~lGl~~ 317 (463)
T KOG2816|consen 247 LVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEK---------RLISLGLLS 317 (463)
T ss_pred HHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------hHhhHHHHH
Confidence 555544444333222 446778888999999999999999999999887766 677777777 366777777
Q ss_pred HHHHHHHhhcccchhHH
Q 013144 409 PGIALIGLTAAKSPVMA 425 (449)
Q Consensus 409 ~~~~~~~~~~~~~~~~~ 425 (449)
-.+....+.+....|..
T Consensus 318 ~~~~~~~~af~~~~w~~ 334 (463)
T KOG2816|consen 318 EFLQLLLFAFATETWMM 334 (463)
T ss_pred HHHHHHHHHHhccchhh
Confidence 77777777777666643
No 137
>PRK03545 putative arabinose transporter; Provisional
Probab=99.54 E-value=5.7e-13 Score=127.47 Aligned_cols=153 Identities=17% Similarity=0.098 Sum_probs=126.0
Q ss_pred hhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHH-HhhhccchhHHHHHHHHHHH
Q 013144 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF-LTPWAADTSLLALLAMRAVV 199 (449)
Q Consensus 121 ~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~-~~~~~~~~~~~~l~~~r~l~ 199 (449)
..+.+.+++|.+..+.+++.+...++..++.++.|++.||+|||+.. .+..+..++.. +.... ++.+.+++..++.
T Consensus 228 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~--~~~~~~~~~~~l~ 304 (390)
T PRK03545 228 IEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAA--NSEWHLSVLSIFW 304 (390)
T ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHh--chHHHHHHHHHHH
Confidence 34445666899999999999999999999999999999999988754 44444444433 33445 7788888899999
Q ss_pred hhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhcC
Q 013144 200 GLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATS 277 (449)
Q Consensus 200 G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 277 (449)
|++.+...+...+.+.+..| ++|+++++++.....+|..+||+++|.+.+++|++..|++.+++.++.++..+...+
T Consensus 305 g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 305 GIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 99988777778888888876 688999999999999999999999999999999999999998888877776666554
No 138
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.54 E-value=2.5e-13 Score=133.04 Aligned_cols=172 Identities=17% Similarity=0.078 Sum_probs=126.2
Q ss_pred HHHHHHHHHHhHhhhhhhhhh-hhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhh
Q 013144 104 LALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (449)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~ 182 (449)
+++..++.+..........|. +.+++|.+..+.++..+...++..++.+++|+++||+|||+.+.....+..++..+..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~ 342 (467)
T PRK09556 263 LCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGV 342 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHH
Confidence 334444444443344555664 5577999999999999999999999999999999999999887765554444332222
Q ss_pred hccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhh-hhHhHHHHHHHHHh-----------
Q 013144 183 WAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS-GNAIGLVLSPILMS----------- 250 (449)
Q Consensus 183 ~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~-G~~~g~~l~~~l~~----------- 250 (449)
+...++.+.+.+.+++.|++.............|.+|+++||.+.|+.+....+ |..++|.+.|.+.+
T Consensus 343 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~ 422 (467)
T PRK09556 343 YQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGY 422 (467)
T ss_pred HHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccc
Confidence 221156667778888888654443434446777999999999999999988886 77999999999999
Q ss_pred -hhCchHHHHHHHHHHHHHHHHHHHh
Q 013144 251 -QAGIFGPFVIFGLSGFLWVLVWLSA 275 (449)
Q Consensus 251 -~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (449)
..||+..|++.++..++..+..++.
T Consensus 423 ~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 423 TLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred cccChHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999998877766655544433
No 139
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.54 E-value=1.1e-13 Score=137.04 Aligned_cols=150 Identities=12% Similarity=0.108 Sum_probs=119.2
Q ss_pred hhhhhhhhh-hhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 013144 118 MSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (449)
Q Consensus 118 ~~~~~~~l~-~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 196 (449)
....+|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+++..+.++..++.++.......+.+.+.+..
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 344566665 5899999999999999999999999999999999999999998887777665544433224455555555
Q ss_pred HHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHH
Q 013144 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (449)
Q Consensus 197 ~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~ 267 (449)
++.++......+...+++.|.+|+++|++++++......+|..+||.+++.+.+..||+..+...+....+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 55554444445677788999999999999999999999999999999999999999999888765544433
No 140
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.53 E-value=7.4e-14 Score=136.02 Aligned_cols=152 Identities=14% Similarity=0.061 Sum_probs=125.5
Q ss_pred hhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhc--CCchHHHH--HHHHHHHHHHHhhhccchhHHHH
Q 013144 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY--GGKIIMAW--GVALWSLATFLTPWAADTSLLAL 192 (449)
Q Consensus 117 ~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~--Grr~~l~~--~~~~~~i~~~~~~~~~~~~~~~l 192 (449)
.....++.+.+++|.+..+.+++.++..++..++.++.|+++||. ++|+...+ +.++.+++.+++... ++++.+
T Consensus 259 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~--~~~~~~ 336 (455)
T TIGR00892 259 APIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALA--GDYTGL 336 (455)
T ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHh--chHHHH
Confidence 334455666678899999999999999999999999999999984 34433333 334444555556666 889999
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh-CchHHHHHHHHHHHHHHH
Q 013144 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-GIFGPFVIFGLSGFLWVL 270 (449)
Q Consensus 193 ~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~ 270 (449)
++.+++.|++.+...+...+++.|.+|++++++.+++++....+|.++||.++|.+.+.. +|++.|++.+++.++..+
T Consensus 337 ~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 337 VIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998877 599999998877665544
No 141
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.53 E-value=9.7e-13 Score=125.87 Aligned_cols=163 Identities=15% Similarity=0.106 Sum_probs=129.1
Q ss_pred hhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 013144 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (449)
Q Consensus 117 ~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 196 (449)
......|.+.+++|.+..+.|+..+.+.++..++.++.|++.||+|||+.+..+..+..++..+....+ ++...+. -
T Consensus 223 ~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~--~ 299 (393)
T PRK09705 223 SLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLP-LQLPVLW--A 299 (393)
T ss_pred HHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHcc-chHHHHH--H
Confidence 444456666667899999999999999999999999999999999999999998888777766554331 3322222 2
Q ss_pred HHHhhhhhhhhhHHHHHHhhccC-cchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC-chHHHHHHHHHHHHHHHHHHH
Q 013144 197 AVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLVWLS 274 (449)
Q Consensus 197 ~l~G~g~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~ 274 (449)
++.|++.+...+.......+..+ +++|++..++.+....++..++|.+.+++.+..| |...|++.++.+++..+....
T Consensus 300 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK09705 300 MVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLR 379 (393)
T ss_pred HHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 46688888888887777777775 5789999999999999999999999999999876 888888877777776666666
Q ss_pred hcCCCCCC
Q 013144 275 ATSSTPDR 282 (449)
Q Consensus 275 ~~~~~~~~ 282 (449)
..||++.+
T Consensus 380 ~~~~~~~~ 387 (393)
T PRK09705 380 FAPARFPQ 387 (393)
T ss_pred hccccccc
Confidence 66665543
No 142
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.52 E-value=8.2e-12 Score=113.94 Aligned_cols=243 Identities=14% Similarity=0.102 Sum_probs=183.9
Q ss_pred CchhhHHHHHHHHHHHHHhhccchhhhhhcCCch-HHHHHHHHHHHHHHHhhhccc-hhHHHHHHHHHHHhhhhhhhhhH
Q 013144 132 SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKI-IMAWGVALWSLATFLTPWAAD-TSLLALLAMRAVVGLAEGVALPA 209 (449)
Q Consensus 132 ~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~i~~~~~~~~~~-~~~~~l~~~r~l~G~g~g~~~~~ 209 (449)
+.+..+...++..+..++.+|+.|.++|+.|+|| .+-+...+..++..+..+.+. +.++..++.-.+..++.....+.
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 3456788888999999999999999999999665 555555566666666677743 34555666778889998888999
Q ss_pred HHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHH------------------hhhCchHHHHHHHHHHHHHHHH
Q 013144 210 MNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM------------------SQAGIFGPFVIFGLSGFLWVLV 271 (449)
Q Consensus 210 ~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~------------------~~~gwr~~f~~~~~~~~~~~~~ 271 (449)
-.+++.+..++++-++..++-.....+|..+.-++.-... +...-|.++.+.++..++..+-
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 9999999999988888888877777777766655532211 1123677888888887777777
Q ss_pred HHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013144 272 WLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYF 351 (449)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (449)
.++..++.++...... ..... .-++.+..+++..+++.+....+..++..=+.++.......|.
T Consensus 216 m~~~v~~~~~~~~~~~-~~l~~---------------g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg 279 (438)
T COG2270 216 MILNVHDAEKISSPPP-TALRN---------------GFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFG 279 (438)
T ss_pred HHhcccccccccccch-HHHHH---------------HHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 7777666654321110 00000 0011234677888888999999999999999999999999999
Q ss_pred HHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 352 NFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 352 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
...+|++..+..++.....+.++++.++.|++.||+|.|
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k 318 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSK 318 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 988999999999999999999999999999999999988
No 143
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.52 E-value=5.5e-13 Score=127.66 Aligned_cols=163 Identities=17% Similarity=0.104 Sum_probs=119.2
Q ss_pred HHHHHHhHhhhhhhhhhh-hhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCch--HHH------HHHHHHHHHH
Q 013144 108 LALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKI--IMA------WGVALWSLAT 178 (449)
Q Consensus 108 ~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~--~l~------~~~~~~~i~~ 178 (449)
.+.............|.+ .+++|.++.+.+++.+...++..++.++.|++.||+|||+ ... .+.++..+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (399)
T TIGR00893 224 QFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLM 303 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Confidence 333333444444455554 5668999999999999999999999999999999999996 111 1111111112
Q ss_pred HHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC-chHH
Q 013144 179 FLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGP 257 (449)
Q Consensus 179 ~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~ 257 (449)
...... ++.+..+....+.+++.+ ..+...+++.|.+|+++|+++.++......+|..++|.+.+.+.+..| |++.
T Consensus 304 ~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~ 380 (399)
T TIGR00893 304 FATNYV--NIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGA 380 (399)
T ss_pred HHhccc--hhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHH
Confidence 222222 355555555555555555 789999999999999999999999999999999999999999999988 9999
Q ss_pred HHHHHHHHHHHHHHHH
Q 013144 258 FVIFGLSGFLWVLVWL 273 (449)
Q Consensus 258 f~~~~~~~~~~~~~~~ 273 (449)
|++.++..++..+..+
T Consensus 381 ~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 381 LMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9988877766655544
No 144
>PRK03699 putative transporter; Provisional
Probab=99.52 E-value=4.6e-13 Score=128.28 Aligned_cols=156 Identities=12% Similarity=0.088 Sum_probs=129.6
Q ss_pred hhhhhhhhhh-hhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q 013144 117 VMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAM 195 (449)
Q Consensus 117 ~~~~~~~~l~-~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~ 195 (449)
.+....|.+. +++|.+..+.+++.+.+.++..++.++.|+++||+|||+.+.....+..+...+.... ++.+.+.+.
T Consensus 223 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~ 300 (394)
T PRK03699 223 TFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNT--DDPSHLLYA 300 (394)
T ss_pred HHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHc--CCchHHHHH
Confidence 3444556555 6789999999999999999999999999999999999999988888777776666666 777777778
Q ss_pred HHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHh
Q 013144 196 RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (449)
Q Consensus 196 r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (449)
.++.|++.+...+...++..|..| ++++...+.......+|..++|.+.+.+.+..||+..+++.+++.++..+.+...
T Consensus 301 ~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 301 ILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHH
Confidence 889999888888888888888775 5567888998889999999999999999999999999998877766665544443
No 145
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.51 E-value=2e-13 Score=130.62 Aligned_cols=158 Identities=13% Similarity=0.117 Sum_probs=122.4
Q ss_pred HHHHHhHhhhhhhhhhhh-hhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHH--HHhhhcc
Q 013144 109 ALCNADRVVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT--FLTPWAA 185 (449)
Q Consensus 109 ~~~~~~~~~~~~~~~~l~-~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~--~~~~~~~ 185 (449)
+.............|.+. +++|.++.+.++..+...++..++.++.|+++||+|||+.+..+..+..+.. ++..+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (394)
T TIGR00883 229 IATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLD 308 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 333333444445556554 6789999999999999999999999999999999999998776555444433 2222221
Q ss_pred chhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHH-HHhhhhhhHhHHHHHHHHHhhhC-chHHHHHHHH
Q 013144 186 DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIA-MGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGL 263 (449)
Q Consensus 186 ~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~-~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~ 263 (449)
.++.+.+++..++.|++.+...+...+++.|.+|+++|+++.++. .....+|..++|.+++.+.++.| |++.++..+.
T Consensus 309 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 309 SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAA 388 (394)
T ss_pred CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHH
Confidence 256777778889999999888999999999999999999999984 56667899999999999999988 8888777665
Q ss_pred HHH
Q 013144 264 SGF 266 (449)
Q Consensus 264 ~~~ 266 (449)
.++
T Consensus 389 ~~l 391 (394)
T TIGR00883 389 LAL 391 (394)
T ss_pred HHH
Confidence 443
No 146
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.51 E-value=4.3e-13 Score=131.91 Aligned_cols=181 Identities=17% Similarity=0.108 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHH
Q 013144 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (449)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~ 179 (449)
.+....+..+.............|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 364 (481)
T TIGR00879 285 LFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLF 364 (481)
T ss_pred HHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 33334444443333334445566778888999998899999999999999999999999999999999999888888877
Q ss_pred Hhhh---ccch------hHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh
Q 013144 180 LTPW---AADT------SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (449)
Q Consensus 180 ~~~~---~~~~------~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~ 250 (449)
+.++ ...+ +...+....++.+.......+....++.|.+|+++|++++++......+|.++++.+.+.+.+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~ 444 (481)
T TIGR00879 365 VLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLE 444 (481)
T ss_pred HHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6652 1112 333333333333333333456677788999999999999999999999999999999999999
Q ss_pred hhCchHHHHHHHHHHHHHHHHHHHhcCCCC
Q 013144 251 QAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (449)
Q Consensus 251 ~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (449)
+.||++.|++.++++++..++.++..||++
T Consensus 445 ~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 445 SIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred hcCccceehhHHHHHHHHHHHHheecccCC
Confidence 999999999988888877777666665544
No 147
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.50 E-value=1.7e-12 Score=124.65 Aligned_cols=160 Identities=13% Similarity=0.109 Sum_probs=123.7
Q ss_pred hHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHH-HHHHHHHHHHHHhhhc---cchhH
Q 013144 114 DRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMA-WGVALWSLATFLTPWA---ADTSL 189 (449)
Q Consensus 114 ~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~-~~~~~~~i~~~~~~~~---~~~~~ 189 (449)
.........|.+.+++|.+..+.+++.+...++..++.+..|+++||+|||+.+. .+.+..+++.+.+.+. ..++.
T Consensus 237 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~ 316 (402)
T TIGR00897 237 GLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSF 316 (402)
T ss_pred HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcH
Confidence 3334445667777889999999999999999999999999999999999988764 3333333333332221 11467
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHH
Q 013144 190 LALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWV 269 (449)
Q Consensus 190 ~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 269 (449)
+.+++..++.|++.+...+ ....+.|..| ++||++.|+.+....+|..++|.+++.+.+..||+..|++.+++.++..
T Consensus 317 ~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~ 394 (402)
T TIGR00897 317 AVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSA 394 (402)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence 7777888999998887555 4566777654 6899999999999999999999999999999999999999888877766
Q ss_pred HHHHHh
Q 013144 270 LVWLSA 275 (449)
Q Consensus 270 ~~~~~~ 275 (449)
++..+.
T Consensus 395 ~~~~~~ 400 (402)
T TIGR00897 395 FLTAFI 400 (402)
T ss_pred HHHHHh
Confidence 655543
No 148
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.49 E-value=2.4e-12 Score=124.89 Aligned_cols=162 Identities=14% Similarity=-0.065 Sum_probs=112.9
Q ss_pred hhhhhhhhhhh-hhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhc--CCchHH-HHHHHHHHHHHHHhhhccchhHHH
Q 013144 116 VVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY--GGKIIM-AWGVALWSLATFLTPWAADTSLLA 191 (449)
Q Consensus 116 ~~~~~~~~~l~-~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~--Grr~~l-~~~~~~~~i~~~~~~~~~~~~~~~ 191 (449)
.......|.+. +++|.+..+.++..+.+.++..++.++.|+++||+ ++|+.. ....+...+........+..+...
T Consensus 260 ~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (434)
T PRK11663 260 AAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVM 339 (434)
T ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHH
Confidence 34444455554 67899999999999999999999999999999999 333322 221111111111111111134444
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHH
Q 013144 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLV 271 (449)
Q Consensus 192 l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 271 (449)
+.+..+..|++...........+.|.+|+++|+.++|+.+....+|.+++|.+.+.+.+..||+..|++.++++++..+.
T Consensus 340 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~ 419 (434)
T PRK11663 340 QAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALL 419 (434)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 44444555554333233345667899999999999999999999999999999999999999999999998888777666
Q ss_pred HHHhcC
Q 013144 272 WLSATS 277 (449)
Q Consensus 272 ~~~~~~ 277 (449)
.++..+
T Consensus 420 ~~~~~~ 425 (434)
T PRK11663 420 LLPFLN 425 (434)
T ss_pred HHHHHh
Confidence 655543
No 149
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.48 E-value=3.1e-12 Score=121.96 Aligned_cols=145 Identities=19% Similarity=0.081 Sum_probs=123.9
Q ss_pred hhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHh
Q 013144 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (449)
Q Consensus 121 ~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G 200 (449)
..+.+.++.|.++.+.|++.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+.. ++.+.+++..++.|
T Consensus 227 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g 304 (382)
T PRK11128 227 FSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST--TALPWLIVIQILHC 304 (382)
T ss_pred HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHH
Confidence 3345556789999999999999999999999999999999999999999999999988888888 89999999999999
Q ss_pred hhhhhhhhHHHHHHhhccCcchhhHHHHHHH-HhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHH
Q 013144 201 LAEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWV 269 (449)
Q Consensus 201 ~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 269 (449)
++.+...+....++.+. +++++++..++.. ....+|..+||.++|.+.+.+|+ ..|+..+++.++.+
T Consensus 305 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 305 GTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 99999899999999887 5677789999886 55678889999999999999887 46666666555443
No 150
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.46 E-value=2.4e-12 Score=125.58 Aligned_cols=159 Identities=11% Similarity=0.004 Sum_probs=111.1
Q ss_pred hhhhhhhhhh-hhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhc--CCchHH-HHHHHHHHHHHHHhhhccchhHHHH
Q 013144 117 VMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY--GGKIIM-AWGVALWSLATFLTPWAADTSLLAL 192 (449)
Q Consensus 117 ~~~~~~~~l~-~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~--Grr~~l-~~~~~~~~i~~~~~~~~~~~~~~~l 192 (449)
......|.+. +++|.+..+.++....+.++..++.++.|+++||+ |||+.. .....+..++.++..+....+.+.+
T Consensus 271 ~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 350 (452)
T PRK11273 271 GILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVD 350 (452)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHH
Confidence 3444566654 45789999999999999999999999999999999 555432 2223333333333222211345555
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhH-hHHHHHHHHHhhhCchHHHHHHHHHHHHHHHH
Q 013144 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNA-IGLVLSPILMSQAGIFGPFVIFGLSGFLWVLV 271 (449)
Q Consensus 193 ~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~-~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 271 (449)
.++.++.|.+..........+..|.+|+++||++.|+.+....+|.. ++|.+.+.+.+..||+..|++.++.+++.++.
T Consensus 351 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~ 430 (452)
T PRK11273 351 MACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVIL 430 (452)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 55555566544333334455678999999999999999988888765 47999999999999999999888777666555
Q ss_pred HHHh
Q 013144 272 WLSA 275 (449)
Q Consensus 272 ~~~~ 275 (449)
....
T Consensus 431 ~~~~ 434 (452)
T PRK11273 431 LIVV 434 (452)
T ss_pred HHHH
Confidence 4443
No 151
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.46 E-value=8.1e-13 Score=127.08 Aligned_cols=136 Identities=13% Similarity=0.077 Sum_probs=115.3
Q ss_pred hhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHH-HhhhccchhHHHHHHHHHHHhh
Q 013144 123 VPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF-LTPWAADTSLLALLAMRAVVGL 201 (449)
Q Consensus 123 ~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~-~~~~~~~~~~~~l~~~r~l~G~ 201 (449)
+.+.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+.++.++..+..+ +.... ++.+.+.+..++.|+
T Consensus 263 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 340 (405)
T TIGR00891 263 TYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIG--ANVAVLGLGLFFQQM 340 (405)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhC--CchHHHHHHHHHHHH
Confidence 345567899999999999999999999999999999999999999888776644333 33334 677777777788888
Q ss_pred hhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC-chHHHHH
Q 013144 202 AEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVI 260 (449)
Q Consensus 202 g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~ 260 (449)
..+...+...+++.|.+|+++|++++|+......+|..++|+++|.+.++.| |+..+..
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 341 LVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 7777788888999999999999999999999999999999999999999988 8776655
No 152
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.45 E-value=7e-11 Score=116.07 Aligned_cols=155 Identities=14% Similarity=0.060 Sum_probs=122.9
Q ss_pred hhhhhhhhcCCCchhhHHHHH-HHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHh---hhccchhHHHHHHHH
Q 013144 121 AIVPLSLAHGWSRSFSGIVQS-SFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT---PWAADTSLLALLAMR 196 (449)
Q Consensus 121 ~~~~l~~~~~~~~~~~g~~~s-~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~---~~~~~~~~~~l~~~r 196 (449)
..|.+.+++|.+..+.+++.. ...++..++.++.|+++||+|+|+.+.++.++.+++.++. +.. .++.+.+.+.-
T Consensus 245 ~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~-~~~~~~l~~~~ 323 (491)
T PRK11010 245 TTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT-DKNLYSMGAAV 323 (491)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc-cccHHHHHHHH
Confidence 344556778999999999974 6678999999999999999999998877666555544332 232 14555566666
Q ss_pred HHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhc
Q 013144 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (449)
Q Consensus 197 ~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 276 (449)
+++.++.|...+...++..+..+++.++...++.+....+|..+++.+.|.+.+..||+..|.+.++++++..+......
T Consensus 324 ~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666666666777888899999999999999999999999999999999999999999999998888887766665553
No 153
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.44 E-value=4.5e-10 Score=104.19 Aligned_cols=304 Identities=13% Similarity=0.067 Sum_probs=202.1
Q ss_pred hhhhhhhhh-cCCCchhhH-HHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 013144 120 VAIVPLSLA-HGWSRSFSG-IVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (449)
Q Consensus 120 ~~~~~l~~~-~~~~~~~~g-~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 197 (449)
...|.+.+. .|++..|+. -+.-...-.+.+..++...+.|..|.|++++++.+...+...+..+. ++...+-+..+
T Consensus 25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~--~sv~~mq~~q~ 102 (412)
T PF01770_consen 25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG--TSVLAMQLMQF 102 (412)
T ss_pred cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH--CcHHHHHHHHH
Confidence 344555554 788888775 45556666777888889999999999999999999999999998888 99999999999
Q ss_pred HHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh--CchHHHHHHHHHHHHHHHHHHHh
Q 013144 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA--GIFGPFVIFGLSGFLWVLVWLSA 275 (449)
Q Consensus 198 l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~ 275 (449)
+.|++.+. ..+-++++-...|+++-.++.+...+..-+|..++.++|..+.... .++..+++......+..+..++
T Consensus 103 ~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~f- 180 (412)
T PF01770_consen 103 FYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALF- 180 (412)
T ss_pred HHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH-
Confidence 99999886 7778888888889999999999999999999999999999887643 3455555544333333333333
Q ss_pred cCCCCCCCCCCCH----HH-----HHHHHHhccCc-cccCCCC-CCC-------CCchhHHHhhccccHHHHHHHHHHHH
Q 013144 276 TSSTPDRHPQISK----YE-----LEYILREKQKP-LLMGNKH-KPA-------TVIPPFRRLLSKMPTWSIIVANAMHS 337 (449)
Q Consensus 276 ~~~~~~~~~~~~~----~~-----~~~~~~~~~~~-~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (449)
.|..++..-..++ .+ .+...+..+.. ....+.. .+. ..+..+++..++|.++...+...+..
T Consensus 181 LP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~at 260 (412)
T PF01770_consen 181 LPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFAT 260 (412)
T ss_pred cCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 4544432111000 00 00000000000 0000000 000 12334566778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHh--hCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHH
Q 013144 338 WGFFVILSWMPIYFNFV--YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG 415 (449)
Q Consensus 338 ~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (449)
.+++.+.++......+. -+-...--|.+-+...+.+.++.+..|++..++.+. ....+.+..+..+..++.
T Consensus 261 cgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~-------~~l~l~~~S~l~a~~L~l 333 (412)
T PF01770_consen 261 CGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW-------GELALGVFSLLQAGLLFL 333 (412)
T ss_pred hHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH-------HHHHHHHHHHHHHHHHHH
Confidence 99988888888887775 122233346666777777788888888885555443 224445555666677777
Q ss_pred hhcccchhHHHHHHHHHHH
Q 013144 416 LTAAKSPVMASAWLTLAIG 434 (449)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~ 434 (449)
+...++.+......++..+
T Consensus 334 m~~t~~Iwv~Y~~yIif~~ 352 (412)
T PF01770_consen 334 MSFTGNIWVCYAGYIIFRS 352 (412)
T ss_pred HHHhhHHHHHHHHHHHHHH
Confidence 7777676655444444333
No 154
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.44 E-value=2.7e-12 Score=124.42 Aligned_cols=143 Identities=13% Similarity=0.080 Sum_probs=108.2
Q ss_pred hhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 013144 118 MSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (449)
Q Consensus 118 ~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 197 (449)
.....|.+.++.|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+.++..+..++......++...+.+..+
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 34456766677899999999999999999999999999999999999999988887776655544331123322222222
Q ss_pred HHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHH
Q 013144 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI 260 (449)
Q Consensus 198 l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~ 260 (449)
..+++.....+..+.++.|.+|+++||+++|+......+|..++|.+.+.+.+..|+....++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTF 392 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 233332333456677889999999999999999999999999999999999998887654443
No 155
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.44 E-value=6.8e-12 Score=123.59 Aligned_cols=164 Identities=18% Similarity=0.060 Sum_probs=124.2
Q ss_pred hhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchh-H-HHHHH
Q 013144 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTS-L-LALLA 194 (449)
Q Consensus 117 ~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~-~-~~l~~ 194 (449)
......|.+.+++|.+....++......+...++.++.|+++||+|||++++.+.++.+++.++.+.....+ . ...+.
T Consensus 289 ~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 368 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALL 368 (479)
T ss_pred HHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 334456778788898888788888888889999999999999999999999999999988887765431111 1 12233
Q ss_pred HHHHHhhhhhh-hhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHH------hhhCchHHHHHHHHHHHH
Q 013144 195 MRAVVGLAEGV-ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM------SQAGIFGPFVIFGLSGFL 267 (449)
Q Consensus 195 ~r~l~G~g~g~-~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~------~~~gwr~~f~~~~~~~~~ 267 (449)
+-++.+++.+. ..+....++.|.+|+++|+.++|+......+|.++++.+.+.+. +..+|++.|++.++++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVL 448 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHH
Confidence 33444444443 34678899999999999999999999999999998876665443 577899999998887777
Q ss_pred HHHHHHHhcCCCC
Q 013144 268 WVLVWLSATSSTP 280 (449)
Q Consensus 268 ~~~~~~~~~~~~~ 280 (449)
..++.++..||++
T Consensus 449 ~~~~~~~~~~e~~ 461 (479)
T PRK10077 449 AALFMWKFVPETK 461 (479)
T ss_pred HHHHHHhccccCC
Confidence 7766666666544
No 156
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.44 E-value=1.1e-11 Score=114.36 Aligned_cols=165 Identities=20% Similarity=0.209 Sum_probs=137.2
Q ss_pred HHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchh
Q 013144 109 ALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTS 188 (449)
Q Consensus 109 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~ 188 (449)
+........++.+-|.+.+..|.+.+.++++.-+|.++..++.++.|++.|| +.|+.+.....+..+..+...+.. ++
T Consensus 222 l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~-~~ 299 (394)
T COG2814 222 LFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTG-AS 299 (394)
T ss_pred HHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhc-ch
Confidence 3334444577788899999999999999999999999999999999999999 999999888787777777665552 56
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHH
Q 013144 189 LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLW 268 (449)
Q Consensus 189 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~ 268 (449)
.+..++.-++.|++.+.........+++ .-++.++.+.++....+++|..+|..+||.+.+++|+....++.+++.++.
T Consensus 300 ~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a 378 (394)
T COG2814 300 PALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLA 378 (394)
T ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Confidence 6667777777888777666666666666 336899999999999999999999999999999999999999999988887
Q ss_pred HHHHHHhc
Q 013144 269 VLVWLSAT 276 (449)
Q Consensus 269 ~~~~~~~~ 276 (449)
.++.+...
T Consensus 379 ~~~~~~~~ 386 (394)
T COG2814 379 LLLALLSA 386 (394)
T ss_pred HHHHHHHH
Confidence 77666554
No 157
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.42 E-value=6.6e-12 Score=120.44 Aligned_cols=143 Identities=13% Similarity=0.091 Sum_probs=124.0
Q ss_pred CCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhH
Q 013144 130 GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPA 209 (449)
Q Consensus 130 ~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~ 209 (449)
+.+....|++.+...+...++.+..|++.||+|+|+.+.++.++.+++..+.+.+ ++.+.+++.++++|++.+.....
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~ 327 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFA--TTALEVVILKMLHAFEVPFLLVG 327 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHH
Confidence 5566778999999999999999999999999999999999999999888877777 88998999999999998877777
Q ss_pred HHHHHhhccCcchhhHHHHH-HHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 013144 210 MNNMVARWFPQTERARAVAI-AMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (449)
Q Consensus 210 ~~~~i~~~~~~~~rg~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 274 (449)
...++.+..+++.++...+. .+....+|..+++.++|++.+..||+..|++.+++.++..++..+
T Consensus 328 ~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 328 CFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888888877766 667899999999999999999999999999988887776665544
No 158
>PRK09952 shikimate transporter; Provisional
Probab=99.41 E-value=1.8e-11 Score=118.81 Aligned_cols=152 Identities=11% Similarity=0.047 Sum_probs=114.2
Q ss_pred hhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhc--cchhHHHHHHHHHHHhh
Q 013144 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA--ADTSLLALLAMRAVVGL 201 (449)
Q Consensus 124 ~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~--~~~~~~~l~~~r~l~G~ 201 (449)
.+.+++|.+......+.....+...++.++.|+++||+|||+++..+.++..++.+..... ..++.+.+++..++.|+
T Consensus 276 y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (438)
T PRK09952 276 YSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANI 355 (438)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 4456788888776666666777778888999999999999999888877665554333221 11345555566677788
Q ss_pred hhhhhhhHHHHHHhhccCcchhhHHHHHHHH-hhhhhhHhHHHHHHHHHhhh--CchHHHHHHHHHHHHHHHHHHHh
Q 013144 202 AEGVALPAMNNMVARWFPQTERARAVAIAMG-GFTSGNAIGLVLSPILMSQA--GIFGPFVIFGLSGFLWVLVWLSA 275 (449)
Q Consensus 202 g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~-~~~~G~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~ 275 (449)
+.+...+...++++|.+|.+.|+.+.++... +..+|..++|.+.+.+.+.. +|+..+...++.+++..+..+..
T Consensus 356 ~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 356 AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 8888888899999999999999999888554 45589999999999998754 48888887777777666665543
No 159
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.40 E-value=4.6e-12 Score=119.96 Aligned_cols=132 Identities=17% Similarity=0.235 Sum_probs=119.4
Q ss_pred hhhhhhhhh-cCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccch-hHHHHHHHHH
Q 013144 120 VAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADT-SLLALLAMRA 197 (449)
Q Consensus 120 ~~~~~l~~~-~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~-~~~~l~~~r~ 197 (449)
...|.+.++ +|.++.+.+++.+...++..++.++.+++.||+|||+.+..+.++.+++..+..+. + +++.+++..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 309 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLT--PPNFPLFLVLWF 309 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh--chhHHHHHHHHH
Confidence 455666655 89999999999999999999999999999999999999999888888888887777 5 4888899999
Q ss_pred HHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC
Q 013144 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (449)
Q Consensus 198 l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 253 (449)
+.|++.+...+...+++.|..|+++|+++.++......+|..+++.++|.+.+..|
T Consensus 310 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 310 AIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999988654
No 160
>TIGR00895 2A0115 benzoate transport.
Probab=99.40 E-value=3.1e-12 Score=122.62 Aligned_cols=137 Identities=21% Similarity=0.225 Sum_probs=111.6
Q ss_pred HHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhH
Q 013144 110 LCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSL 189 (449)
Q Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~ 189 (449)
.............|.+.+++|.++.+.+++.+...++..++.++.|++.||+|||+.+....+......++.... ++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 338 (398)
T TIGR00895 261 MLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTL--FSP 338 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh--hCH
Confidence 333334444555678888899999999999999999999999999999999999955444443333333333324 677
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHH
Q 013144 190 LALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (449)
Q Consensus 190 ~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l 248 (449)
+.+++..++.|++.+...+...+++.|.+|+++|++++|+......+|..+||.++|.+
T Consensus 339 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 339 TLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 77888889999999999999999999999999999999999999999999999999875
No 161
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.40 E-value=2.4e-11 Score=118.74 Aligned_cols=153 Identities=20% Similarity=0.198 Sum_probs=137.5
Q ss_pred hhhhhhhhh-hhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 013144 118 MSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (449)
Q Consensus 118 ~~~~~~~l~-~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 196 (449)
+...+|.+. +++|.++..+|++.+.+.+|..+++++.+++.+|+++++.+..+.++.+++.+..+++ ++.+..++.-
T Consensus 237 ~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~--~~~~~~~~~l 314 (524)
T PF05977_consen 237 VWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS--PSFWLALIAL 314 (524)
T ss_pred HHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc--hHHHHHHHHH
Confidence 334567665 5689999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHH
Q 013144 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVW 272 (449)
Q Consensus 197 ~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 272 (449)
++.|++.....+...+.+.+..|++.||+.++++.+....+..+|..+.|.+.+.+|.+..+.+.++..++..++.
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 9999999998999999999999999999999999999999999999999999999999999888776555444443
No 162
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.39 E-value=3.7e-11 Score=116.12 Aligned_cols=159 Identities=14% Similarity=0.160 Sum_probs=137.9
Q ss_pred HhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCc--hHHHHHHHHHHHHHHHhhh--------c
Q 013144 115 RVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK--IIMAWGVALWSLATFLTPW--------A 184 (449)
Q Consensus 115 ~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr--~~l~~~~~~~~i~~~~~~~--------~ 184 (449)
..+.........+++|++..+...+.-...+..+++++++|++.||+|.| ++++++++++.+..+...+ .
T Consensus 298 ~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~ 377 (477)
T PF11700_consen 298 NTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGL 377 (477)
T ss_pred HHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCc
Confidence 34445555666679999999999999999999999999999999999999 8888888888665555444 4
Q ss_pred cchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC-chHHHHHHHH
Q 013144 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGL 263 (449)
Q Consensus 185 ~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~ 263 (449)
++-+.+.+.-++.|+..|..++.+.++.+|+.|+++.+..+|++....-....+||.+.+.+.+..| -|+.+....+
T Consensus 378 --~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~ 455 (477)
T PF11700_consen 378 --KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLV 455 (477)
T ss_pred --ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 7888899999999999999999999999999999999999999999999999999999999999877 8999888877
Q ss_pred HHHHHHHHHHHh
Q 013144 264 SGFLWVLVWLSA 275 (449)
Q Consensus 264 ~~~~~~~~~~~~ 275 (449)
+.++.+++.++.
T Consensus 456 lf~~gl~ll~~v 467 (477)
T PF11700_consen 456 LFLIGLILLFFV 467 (477)
T ss_pred HHHHHHHHHhhc
Confidence 777766665544
No 163
>PRK10054 putative transporter; Provisional
Probab=99.38 E-value=1.3e-11 Score=118.14 Aligned_cols=152 Identities=16% Similarity=0.113 Sum_probs=125.0
Q ss_pred hhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhh
Q 013144 127 LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVA 206 (449)
Q Consensus 127 ~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~ 206 (449)
++.+.+....+++.+.+.+......++.|++.||+++|+.+..++.+.+++.....+.. ++.+.+++..++.|+|.+..
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~ 315 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSG-NSLLLWGMSAAVFTVGEIIY 315 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcc-hHHHHHHHHHHHHHHHHHHH
Confidence 45566777888888888888888888999999999999999999988888887776531 57777788899999999988
Q ss_pred hhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhcCCCC
Q 013144 207 LPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (449)
Q Consensus 207 ~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (449)
.|...+++.+..|++.|+++.+..+ ...+|..+||.++|.+.++.|....|++.+....+..++.+.-.+|+|
T Consensus 316 ~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (395)
T PRK10054 316 APGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLMLKGMRARP 388 (395)
T ss_pred HhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHhccccCc
Confidence 8999999999999999999998765 566899999999999999999999998877666665555554444433
No 164
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.38 E-value=2.1e-11 Score=116.69 Aligned_cols=150 Identities=18% Similarity=0.121 Sum_probs=115.7
Q ss_pred hhhhhhhhcCCCchhhHHHHHHHH-HHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhh-c---cchhHHHHHHH
Q 013144 121 AIVPLSLAHGWSRSFSGIVQSSFL-WGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW-A---ADTSLLALLAM 195 (449)
Q Consensus 121 ~~~~l~~~~~~~~~~~g~~~s~~~-~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~-~---~~~~~~~l~~~ 195 (449)
..+.+.+|.|.++.++|++..... ....++.++.|++.||+|+|+.+.++.++.++..+.... . ..++...+...
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 345555678999999999988876 466778899999999999999998877766443332221 1 01334445555
Q ss_pred HHHHhhhhhhhhhHHHHHHhhccCc-chhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHH
Q 013144 196 RAVVGLAEGVALPAMNNMVARWFPQ-TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (449)
Q Consensus 196 r~l~G~g~g~~~~~~~~~i~~~~~~-~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~ 270 (449)
..+.+++.|...+...+.+.+..++ +++++.+++.+...++|..+||.++|.+.+..||+..|++.+++.++..+
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 6667777787778888887777766 78999999999999999999999999999999999999987776665443
No 165
>PRK10504 putative transporter; Provisional
Probab=99.36 E-value=2e-11 Score=120.01 Aligned_cols=139 Identities=13% Similarity=0.142 Sum_probs=116.2
Q ss_pred hhhhhhhhhhhh-hcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhcc-chhHHHHH
Q 013144 116 VVMSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA-DTSLLALL 193 (449)
Q Consensus 116 ~~~~~~~~~l~~-~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~-~~~~~~l~ 193 (449)
.......|.+.+ .+|.++.+.++....+.++..++.++.|++.||+|||+++..+.++.+++..+..+.. .++.+.+.
T Consensus 278 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (471)
T PRK10504 278 GMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLP 357 (471)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHH
Confidence 344445666554 5899999999999999999999999999999999999999999998888876665532 13444555
Q ss_pred HHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCc
Q 013144 194 AMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (449)
Q Consensus 194 ~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 254 (449)
+..++.|++.+...+....++.+..|+++++.+.++.+....+|..+|+.+++.+.+..|+
T Consensus 358 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 358 FVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 6678889999988899999999999999999999999999999999999999999887665
No 166
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.36 E-value=1.1e-11 Score=120.59 Aligned_cols=176 Identities=18% Similarity=0.177 Sum_probs=156.5
Q ss_pred HHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcC--CchHHHHHHHHHHH
Q 013144 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG--GKIIMAWGVALWSL 176 (449)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G--rr~~l~~~~~~~~i 176 (449)
..+..+.+...+...........+|...++++.++.+.+.+.++..+...++.++.|+++|+.. ++.+..+++++.++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 4455666666667777778888899999999999999999999999999999999999999988 55688888888888
Q ss_pred HHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC-ch
Q 013144 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IF 255 (449)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr 255 (449)
+.+.+++. ++++.+.....+.|++.|........++.|..+.++-..+.|+...+.+++.++||+++|.+.+..| |.
T Consensus 378 ~~~~~p~~--~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~ 455 (509)
T KOG2504|consen 378 ARLFLPFA--TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYD 455 (509)
T ss_pred HHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCee
Confidence 88889999 9999999999999999999988888999999999999999999999999999999999999988877 99
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 013144 256 GPFVIFGLSGFLWVLVWLSAT 276 (449)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~~~~ 276 (449)
..|+..++..++..+++++..
T Consensus 456 ~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 456 HAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eehhhcChHHHHHHHHHHHhH
Confidence 999998888777776655553
No 167
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.35 E-value=2.3e-11 Score=118.33 Aligned_cols=132 Identities=17% Similarity=0.170 Sum_probs=110.6
Q ss_pred hhhhhh-hcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHh
Q 013144 122 IVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (449)
Q Consensus 122 ~~~l~~-~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G 200 (449)
.+.+.+ .++ ++.+.+++.+...++..++.+++++++||+|+|+++.++.++.+++.++..+.. ++.+.+++..++.|
T Consensus 245 ~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g 322 (437)
T TIGR00792 245 QVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG-SNLPLILVLIILAG 322 (437)
T ss_pred hheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc-hhHHHHHHHHHHHH
Confidence 344333 334 566778888888999999999999999999999999999998888877766652 46677788888999
Q ss_pred hhhhhhhhHHHHHHhhccC-------cchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCch
Q 013144 201 LAEGVALPAMNNMVARWFP-------QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (449)
Q Consensus 201 ~g~g~~~~~~~~~i~~~~~-------~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr 255 (449)
++.+...+...++++|..+ ++++|.+.|+.+....+|..+++.+.+.+.+..||.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 323 FGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999998865 456899999999999999999999999999887773
No 168
>PRK15075 citrate-proton symporter; Provisional
Probab=99.34 E-value=6.8e-11 Score=114.78 Aligned_cols=142 Identities=17% Similarity=0.077 Sum_probs=104.4
Q ss_pred Hhhhhhhhhhhhh-hcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHH-h-hhccchhHHH
Q 013144 115 RVVMSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL-T-PWAADTSLLA 191 (449)
Q Consensus 115 ~~~~~~~~~~l~~-~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~-~-~~~~~~~~~~ 191 (449)
........|.+.+ .+|.+..+.++....+.++..++.++.|+++||+|||+++..+.++..+.... . .....+++..
T Consensus 254 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (434)
T PRK15075 254 FYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFAR 333 (434)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHH
Confidence 3344455666544 47999999999999999999999999999999999999888765544332211 1 1111145555
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhh-hhhhHhHHHHHHHHHhhhCchH
Q 013144 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGF-TSGNAIGLVLSPILMSQAGIFG 256 (449)
Q Consensus 192 l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~-~~G~~~g~~l~~~l~~~~gwr~ 256 (449)
+.+..++.|++.+...+....++.|.+|+++|+.++++..... .++..++|.+.+.+.++.|+++
T Consensus 334 ~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~ 399 (434)
T PRK15075 334 MLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKA 399 (434)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCch
Confidence 5555666777777777777788999999999999999865444 4457789999999999888653
No 169
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.34 E-value=6e-11 Score=110.59 Aligned_cols=153 Identities=14% Similarity=0.116 Sum_probs=133.1
Q ss_pred hhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhh
Q 013144 127 LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVA 206 (449)
Q Consensus 127 ~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~ 206 (449)
++-+.++...|.+.+...+.-++.-.+..++.+|+|.|+.++++.+++.+=.++++++ ++.+.+.+.+.+.|+-.+..
T Consensus 252 ~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~--~~~~~i~~~klLH~~e~~l~ 329 (412)
T PF01306_consen 252 QSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA--TNPWVISLIKLLHALEFPLL 329 (412)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----SHHHHHHHHHHHHHHHHHH
T ss_pred cccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh--cchHHHHHHHHHHHHHHHHH
Confidence 3334456789999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred hhHHHHHHhhccCcchhhHHHHHH-HHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 013144 207 LPAMNNMVARWFPQTERARAVAIA-MGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPD 281 (449)
Q Consensus 207 ~~~~~~~i~~~~~~~~rg~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~ 281 (449)
......|+++.+|++..++...+. +...++|..+.+.++|.+.|+.|.+.+|++.+.+.++..++..+..+++++
T Consensus 330 lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 330 LVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 999999999999988888888774 688899999999999999999999999999999888888887777755443
No 170
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.34 E-value=1e-11 Score=122.74 Aligned_cols=164 Identities=20% Similarity=0.066 Sum_probs=109.5
Q ss_pred hhhhhhhhhhhhcCCCchhhHH------------HHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhc
Q 013144 117 VMSVAIVPLSLAHGWSRSFSGI------------VQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (449)
Q Consensus 117 ~~~~~~~~l~~~~~~~~~~~g~------------~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~ 184 (449)
......|.+.++.|.+....+. ......++..++.++.++++||+|||++++++.++.+++.++.++.
T Consensus 306 ~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~ 385 (502)
T TIGR00887 306 GVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFA 385 (502)
T ss_pred ccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 3344467777777776543221 2334445666788889999999999999998888877776665543
Q ss_pred cc--hhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh----------h
Q 013144 185 AD--TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ----------A 252 (449)
Q Consensus 185 ~~--~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~----------~ 252 (449)
.. ++...+...-+...++.....+....+.+|.+|.+.|+++.++......+|.+++|.+.+++.+. .
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 465 (502)
T TIGR00887 386 YNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGI 465 (502)
T ss_pred HHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccc
Confidence 10 11111121112222222233556677889999999999999999999999999999999998873 3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 013144 253 GIFGPFVIFGLSGFLWVLVWLSATSSTPD 281 (449)
Q Consensus 253 gwr~~f~~~~~~~~~~~~~~~~~~~~~~~ 281 (449)
++...|++.++.+++..+.. ++.||++.
T Consensus 466 ~~~~~~~i~~~~~~~~~i~~-~~lpEt~~ 493 (502)
T TIGR00887 466 WMGHVLEIFALFMFLGILFT-LLIPETKG 493 (502)
T ss_pred cchHHHHHHHHHHHHHHHHh-eEeccCCC
Confidence 45667787777776655544 45566543
No 171
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.34 E-value=3e-11 Score=117.37 Aligned_cols=161 Identities=11% Similarity=-0.029 Sum_probs=110.7
Q ss_pred hhhhhhhhh-hcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHH---HHHHHhhhccchhHHHHHH
Q 013144 119 SVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS---LATFLTPWAADTSLLALLA 194 (449)
Q Consensus 119 ~~~~~~l~~-~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~---i~~~~~~~~~~~~~~~l~~ 194 (449)
....|.+.+ ..|.++.+.++...++.++..++.++.|+++||+|+++....+..+.. ++.++.......+.+...+
T Consensus 271 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (438)
T TIGR00712 271 LDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMI 350 (438)
T ss_pred HHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHH
Confidence 334555544 478999999999999999999999999999999975442223332221 1222222221124444444
Q ss_pred HHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhh-hHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHH
Q 013144 195 MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSG-NAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWL 273 (449)
Q Consensus 195 ~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G-~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 273 (449)
.-++.|++.............|.+|+++|+.+.|+.+....+| .++||.+.|.+.++.||.+.|++.+...++..+..+
T Consensus 351 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 430 (438)
T TIGR00712 351 CMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 430 (438)
T ss_pred HHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 4455565433322333456789999999999999998887776 578999999999999999999988777777666666
Q ss_pred HhcCCC
Q 013144 274 SATSST 279 (449)
Q Consensus 274 ~~~~~~ 279 (449)
+..+|+
T Consensus 431 ~~~~~~ 436 (438)
T TIGR00712 431 VVMIGE 436 (438)
T ss_pred HHHhhc
Confidence 666554
No 172
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.33 E-value=5.5e-11 Score=114.46 Aligned_cols=154 Identities=14% Similarity=0.034 Sum_probs=121.3
Q ss_pred hhh-hhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhcc---chhHHHHHHHHH
Q 013144 122 IVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA---DTSLLALLAMRA 197 (449)
Q Consensus 122 ~~~-l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~---~~~~~~l~~~r~ 197 (449)
.|. +.+++|.++.+.++......++..++.++.|++.||+|+|+.+.++.++..++.++.++.+ .++++.+++.-+
T Consensus 238 ~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
T PRK15402 238 SPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLS 317 (406)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHH
Confidence 444 3567899999999998888889999999999999999999999999888877777665531 146777788889
Q ss_pred HHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhc
Q 013144 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (449)
Q Consensus 198 l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 276 (449)
+.|+|.+...+......... ++++||+..+..+....+|..+|+.+++.+.+..++....+..++.+++.++......
T Consensus 318 ~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK15402 318 LYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIFL 395 (406)
T ss_pred HHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999988777766665444 4589999999999999999999999999998888877766665555555444444443
No 173
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.33 E-value=3.2e-11 Score=114.72 Aligned_cols=142 Identities=15% Similarity=0.012 Sum_probs=105.3
Q ss_pred hhhhhhhh-hhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCC-chHHH-HHH-HHHHHHHHHhhhccchhHHHH
Q 013144 117 VMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KIIMA-WGV-ALWSLATFLTPWAADTSLLAL 192 (449)
Q Consensus 117 ~~~~~~~~-l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~-~~~-~~~~i~~~~~~~~~~~~~~~l 192 (449)
......|. +.+++|.++.+.++..+...++..++.++.|++.||+++ |+... ... ....++..........+.+.+
T Consensus 234 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (379)
T TIGR00881 234 GILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMD 313 (379)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHH
Confidence 33434444 456789999999999999999999999999999998643 33222 222 122222222222111456666
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHH
Q 013144 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (449)
Q Consensus 193 ~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f 258 (449)
.+..++.|+......+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..||++.|
T Consensus 314 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 314 LICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 677777887666666677788999999999999999999999999999999999999999999764
No 174
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.33 E-value=4.5e-11 Score=104.27 Aligned_cols=152 Identities=18% Similarity=0.098 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHH
Q 013144 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (449)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i 176 (449)
||..+......... ....+.++..-|++++++|+|.+|...+.+...+|..+ .++.|.+.|++|++.++++|.+...+
T Consensus 1 rW~~l~a~~~v~~~-~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 1 RWLSLVASIWVQLC-SGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred ChhhHHHHHHHHHh-cCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 46655555555543 34567788889999999999999999999999999987 58889999999999999999999999
Q ss_pred HHHHhhhcc-----chhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh
Q 013144 177 ATFLTPWAA-----DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ 251 (449)
Q Consensus 177 ~~~~~~~~~-----~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~ 251 (449)
|..+...+. ..++|.+.+..++.|.+.+...+++.....+.|| ++||.+.|+.-...+++..+-..+...+.+.
T Consensus 79 GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 79 GYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 988766541 2578889888899999888777887777778897 6899999999999999988887777766554
No 175
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.33 E-value=1.8e-11 Score=111.55 Aligned_cols=179 Identities=20% Similarity=0.118 Sum_probs=144.6
Q ss_pred HHHHHHHHHHHHHHHhHhhhhhhhhh-hhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhc--CCchHHH-HHHHHH
Q 013144 99 KVVSMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY--GGKIIMA-WGVALW 174 (449)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~--Grr~~l~-~~~~~~ 174 (449)
..+.+++++++..+..++.+.--.|. +.|..|.+...+++..+.+-.+...+.+++|+++||+ |||..+. +.++..
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 35667778888888888777766665 5567799999999999999999999999999999996 7776544 444444
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhh-hhHhHHHHHHHHHhhhC
Q 013144 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS-GNAIGLVLSPILMSQAG 253 (449)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~-G~~~g~~l~~~l~~~~g 253 (449)
.++.+..-+++..|+++..++-++.|+..-+..-..-....|..|++--|.+.|+.+.+..+ |.+.+....+++.+.+|
T Consensus 332 ~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g 411 (448)
T COG2271 332 TASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWG 411 (448)
T ss_pred HHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCC
Confidence 44455555554457788899999999988777777888889999999999999999999998 99999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcC
Q 013144 254 IFGPFVIFGLSGFLWVLVWLSATS 277 (449)
Q Consensus 254 wr~~f~~~~~~~~~~~~~~~~~~~ 277 (449)
|...|++..+.+++..++......
T Consensus 412 W~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 412 WDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHh
Confidence 999999987777766665555543
No 176
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.32 E-value=1.9e-10 Score=105.88 Aligned_cols=154 Identities=16% Similarity=0.144 Sum_probs=117.2
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhh---hcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHh
Q 013144 105 ALALALCNADRVVMSVAIVPLSL---AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (449)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~ 181 (449)
.+..++............+.+.+ .+|.++.+.++..+.+..+..++.+..+++.||+|+|+++.++..+..++.++.
T Consensus 146 ~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~ 225 (310)
T TIGR01272 146 ALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGA 225 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 34444433333343433344333 368999999999999999999999999999999999999988888888877666
Q ss_pred hhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHH
Q 013144 182 PWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIF 261 (449)
Q Consensus 182 ~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~ 261 (449)
... ++... ..+-++.|++.+..+|...+...+..|+ +.+.+.++. ....+|.+++|++.|.+.+..|.+..|++.
T Consensus 226 ~~~--~~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~ 300 (310)
T TIGR01272 226 ALT--HGYVA-MWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALP 300 (310)
T ss_pred HHc--CCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHH
Confidence 555 44332 2355588999999999999999998864 456666765 556789999999999999999999888754
Q ss_pred HH
Q 013144 262 GL 263 (449)
Q Consensus 262 ~~ 263 (449)
.+
T Consensus 301 ~~ 302 (310)
T TIGR01272 301 VP 302 (310)
T ss_pred HH
Confidence 43
No 177
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.31 E-value=2.1e-10 Score=109.71 Aligned_cols=146 Identities=16% Similarity=0.162 Sum_probs=117.7
Q ss_pred hhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHH-HHHHHHHhhhccchhHHHHHHHHHHHh
Q 013144 122 IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL-WSLATFLTPWAADTSLLALLAMRAVVG 200 (449)
Q Consensus 122 ~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~-~~i~~~~~~~~~~~~~~~l~~~r~l~G 200 (449)
.|.+.+++|.++.+.+++...+.++..++.++.|++.||.+ |+.++.+..+ .....++.... ++.+.+.+..++.|
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~l~G 316 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWG--SDKIVATGVAIIWG 316 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHH
Confidence 46677788999999999999999999999999999999964 4444444444 33334444455 67888888899999
Q ss_pred hhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHH
Q 013144 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLV 271 (449)
Q Consensus 201 ~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 271 (449)
++.+...+...+++.+..| +++++..++......+|..+|+.++|.+.+..|++..++..+.+.++..+.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 317 LTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred HHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHH
Confidence 9999989999989999887 567788888888899999999999999999999999988877665554433
No 178
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.31 E-value=1.8e-10 Score=109.95 Aligned_cols=152 Identities=14% Similarity=0.024 Sum_probs=113.1
Q ss_pred hhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHh
Q 013144 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (449)
Q Consensus 121 ~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G 200 (449)
..|.+.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++..... ++.+..++..++.+
T Consensus 222 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~ 300 (382)
T PRK10091 222 IKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFG-GMKTASLIFAFICC 300 (382)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHH
Confidence 34556667899999999999999999999999999999999999999998888888776554321 45566666666777
Q ss_pred hhhhhhhhHHH-HHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh-hCchHHHHHHHHHHHHHHHHHHHh
Q 013144 201 LAEGVALPAMN-NMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-AGIFGPFVIFGLSGFLWVLVWLSA 275 (449)
Q Consensus 201 ~g~g~~~~~~~-~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~ 275 (449)
++.....+... ....+..+++.++... ......+|..+||.++|.+.+. .+|++.+.+.+++.++........
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 301 AGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 76554444334 3444544555555543 3567889999999999999985 689999999877766555444443
No 179
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.28 E-value=5.5e-09 Score=104.58 Aligned_cols=157 Identities=18% Similarity=0.243 Sum_probs=128.4
Q ss_pred hhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhh-cCCchHHHHHHHHHHHHHHHhhhccch------hHHHH
Q 013144 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLATFLTPWAADT------SLLAL 192 (449)
Q Consensus 120 ~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~~~------~~~~l 192 (449)
.....+.+.+|.+...+..+...+....-+.++++|.++|+ +|+++.++++.++..+|.++.++...+ .....
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 34445556789999999999999999999999999999997 699999999999999999887765211 12346
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhccCcc---hhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh-------CchHHHHHHH
Q 013144 193 LAMRAVVGLAEGVALPAMNNMVARWFPQT---ERARAVAIAMGGFTSGNAIGLVLSPILMSQA-------GIFGPFVIFG 262 (449)
Q Consensus 193 ~~~r~l~G~g~g~~~~~~~~~i~~~~~~~---~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~-------gwr~~f~~~~ 262 (449)
+++-.+..+|.|++-+...+...|-++++ +|-..+.++..+.++|+.+++++.+++.+.. +|...|.+.+
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~ 168 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPA 168 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHH
Confidence 67788899999999999999999999754 4778899999999999999999999887443 6999999988
Q ss_pred HHHHHHHHHHHHhc
Q 013144 263 LSGFLWVLVWLSAT 276 (449)
Q Consensus 263 ~~~~~~~~~~~~~~ 276 (449)
+..++..++.....
T Consensus 169 i~m~ia~lvf~~g~ 182 (654)
T TIGR00926 169 ILMILALIVFMAGS 182 (654)
T ss_pred HHHHHHHHHHHHhc
Confidence 88777666655443
No 180
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.28 E-value=2e-10 Score=110.31 Aligned_cols=149 Identities=17% Similarity=0.125 Sum_probs=109.8
Q ss_pred hhhhhhhcCCCchhhHHHHHHH-HHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHh---hhccchhHHHHHHHH-
Q 013144 122 IVPLSLAHGWSRSFSGIVQSSF-LWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT---PWAADTSLLALLAMR- 196 (449)
Q Consensus 122 ~~~l~~~~~~~~~~~g~~~s~~-~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~---~~~~~~~~~~l~~~r- 196 (449)
.+.+.+++|.++.+.+++.+.. .++..++.++.|++.||+|+|+.+.++.++..+..+.. ++.+ ++.+.+++.-
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~~ 311 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTP-KHLWTMALAIG 311 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcHHHHHHHHH
Confidence 3456677899999999998665 45688999999999999999998887777666554433 3331 3555555544
Q ss_pred ---HHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHH
Q 013144 197 ---AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWL 273 (449)
Q Consensus 197 ---~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 273 (449)
+..|++.+...+....++.+.+|.+++ ++.+...++|..+++.++|.+.+.+||+..|.+.++++++..++.+
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 456666777777888888888876654 4455556777777777899999999999999998888877655554
Q ss_pred Hh
Q 013144 274 SA 275 (449)
Q Consensus 274 ~~ 275 (449)
..
T Consensus 388 ~~ 389 (402)
T PRK11902 388 LM 389 (402)
T ss_pred HH
Confidence 43
No 181
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.28 E-value=3.5e-10 Score=109.70 Aligned_cols=156 Identities=17% Similarity=0.090 Sum_probs=101.5
Q ss_pred hhhhhhh-hhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhh--hccchhHHHHHH
Q 013144 118 MSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP--WAADTSLLALLA 194 (449)
Q Consensus 118 ~~~~~~~-l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~--~~~~~~~~~l~~ 194 (449)
....+|. +.+++|.+..+.++..++..++..++.++.|+++||+|||+.+.++.++.++..+... ....++....+.
T Consensus 262 ~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (432)
T PRK10406 262 FTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFG 341 (432)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 3344555 4456899998999999988888899999999999999999988777665443332111 110023333222
Q ss_pred HHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhh-hhHhHHHHHHHHHhhhC-chHHHHHHHHHHHHHHHHH
Q 013144 195 MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS-GNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLVW 272 (449)
Q Consensus 195 ~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~-G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~ 272 (449)
.-.+.+++.+...+....+++|++|++.|+.+.|+.....++ .....|.+.+.+ +..| |...+++.++..++..+..
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~ 420 (432)
T PRK10406 342 LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVS 420 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHH
Confidence 223333334444456778899999999999999998866554 344477777755 4445 5556666555555555544
Q ss_pred HH
Q 013144 273 LS 274 (449)
Q Consensus 273 ~~ 274 (449)
++
T Consensus 421 ~~ 422 (432)
T PRK10406 421 LM 422 (432)
T ss_pred HH
Confidence 44
No 182
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.28 E-value=8.7e-11 Score=112.60 Aligned_cols=151 Identities=16% Similarity=0.134 Sum_probs=119.4
Q ss_pred hhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhh-cCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 013144 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAV 198 (449)
Q Consensus 120 ~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l 198 (449)
...|.+.++.+.++.+.+++.+...++..++..+.+++.|| ++.++.+..+.++.+++.++.++. ++++.+++..++
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l 306 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV--SNLQQLFTLICL 306 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHH
Confidence 34666666655577889999888887777666666777765 666777788888888888877777 888888888888
Q ss_pred HhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh---C-chHHHHHHHHHHHHHHHHH
Q 013144 199 VGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA---G-IFGPFVIFGLSGFLWVLVW 272 (449)
Q Consensus 199 ~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~---g-wr~~f~~~~~~~~~~~~~~ 272 (449)
.|++.+...|...+++.|..|+++||+.+|+.+....+|..+||.++|.+.++. + -...++..++++++..+..
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLAL 384 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHH
Confidence 999988888999999999999999999999999999999999999999998874 3 3455555555555544443
No 183
>TIGR00898 2A0119 cation transport protein.
Probab=99.26 E-value=3e-10 Score=112.69 Aligned_cols=149 Identities=19% Similarity=0.108 Sum_probs=114.4
Q ss_pred hhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhh
Q 013144 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (449)
Q Consensus 126 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 205 (449)
.++++.+.. +......+....+.++.+++.||+|||+.+.++.++.+++.++..+.+..+.+..++.-++.+++.+.
T Consensus 350 ~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (505)
T TIGR00898 350 LGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITS 426 (505)
T ss_pred ccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHH
Confidence 344454432 33345566777888899999999999999999999999988887776322335556666777788788
Q ss_pred hhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhcCCCC
Q 013144 206 ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (449)
Q Consensus 206 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (449)
..+..+.+..|.+|++.|+.++|+.+....+|.+++|.+.+ + ...++..++++.+...++..++.++ .||+.
T Consensus 427 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~ 498 (505)
T TIGR00898 427 AFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLF-LPETK 498 (505)
T ss_pred HHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHc-CcCCC
Confidence 88889999999999999999999999999999999999988 4 3456777888877777776665544 45543
No 184
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.26 E-value=2e-10 Score=108.42 Aligned_cols=133 Identities=17% Similarity=0.086 Sum_probs=107.7
Q ss_pred hhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhc-CCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 013144 118 MSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (449)
Q Consensus 118 ~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 196 (449)
.....|.+.++.|.+..+.+++.+...++..++.++.|++.||+ +||+.+.++..+.+++.++..+. ++..... .-
T Consensus 216 ~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~ 292 (355)
T TIGR00896 216 LIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFA--PMHGLWA-WA 292 (355)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHh--hhhHHHH-HH
Confidence 34456766677899999999999999999999999999999999 56777778888888887777666 4322222 35
Q ss_pred HHHhhhhhhhhhHHHHHHhhccC-cchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC
Q 013144 197 AVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (449)
Q Consensus 197 ~l~G~g~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 253 (449)
++.|++.|...+...+.+.+..+ +++++...++.+....+|..++|.+.|.+.++.|
T Consensus 293 ~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 293 LVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 67899999988888787765554 5667899999999899999999999999998876
No 185
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.25 E-value=4.7e-10 Score=106.40 Aligned_cols=166 Identities=17% Similarity=0.202 Sum_probs=127.6
Q ss_pred HHhHhhhhhhhhhhhhhcC-CCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHH
Q 013144 112 NADRVVMSVAIVPLSLAHG-WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLL 190 (449)
Q Consensus 112 ~~~~~~~~~~~~~l~~~~~-~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~ 190 (449)
......+....+...++.| .+....+.+.+...++=++.-...+++..|+|.|+++.++++..++=..+.+... ++.+
T Consensus 220 ~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~-~~~~ 298 (400)
T PF03825_consen 220 GISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFS-DPWP 298 (400)
T ss_pred HHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhc-CCcH
Confidence 3333344444555566776 6777788888888888889999999999999999999999999999888877662 2322
Q ss_pred H----HHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHH-hhhhhhHhHHHHHHHHHhhhCch------HHHH
Q 013144 191 A----LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMG-GFTSGNAIGLVLSPILMSQAGIF------GPFV 259 (449)
Q Consensus 191 ~----l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~-~~~~G~~~g~~l~~~l~~~~gwr------~~f~ 259 (449)
. .++...++|+..|..+..+..++.+..|++.|+++.++++. ..++|..+|..++|++.+++|-+ ..+.
T Consensus 299 ~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~ 378 (400)
T PF03825_consen 299 FIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFL 378 (400)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHH
Confidence 2 23345679999999999999999999999999999999876 56899999999999999987744 3445
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q 013144 260 IFGLSGFLWVLVWLSATSS 278 (449)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~ 278 (449)
+.+.+.++..++.++..+|
T Consensus 379 v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 379 VFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHHHhhccC
Confidence 5555555555555444443
No 186
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.25 E-value=1.3e-10 Score=114.04 Aligned_cols=148 Identities=17% Similarity=0.026 Sum_probs=105.5
Q ss_pred hhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCc-------hHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 013144 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK-------IIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (449)
Q Consensus 124 ~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr-------~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 196 (449)
.+.+++|.+..+.+++.+++.++..++.++.|+++||+||| ..+.+..++.++..++.+.. ++.+..++.-
T Consensus 278 ~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~--~~~~~~~~~~ 355 (476)
T PLN00028 278 YFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRA--NSLGAAIVVM 355 (476)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhccc--chHHHHHHHH
Confidence 34567899999999999999999999999999999999865 23333333333444444445 5666666666
Q ss_pred HHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHh
Q 013144 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (449)
Q Consensus 197 ~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (449)
++.+++.+...+...+++.+.. +++||...|+...+..+|..+++.+.+ ..+..+|+..|++.+++.++..++.++.
T Consensus 356 ~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 356 ILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred HHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 6777776666666667777765 478999999987777677766665543 1123469999999887777766655554
No 187
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.24 E-value=5.8e-11 Score=112.90 Aligned_cols=181 Identities=17% Similarity=0.105 Sum_probs=138.8
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHh
Q 013144 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (449)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~ 181 (449)
..+.+......-+..........+-++-|++..++.+......+...+..+.+..+.||+|||+.++.+..+..+..+++
T Consensus 273 i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~ 352 (485)
T KOG0569|consen 273 IGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLM 352 (485)
T ss_pred HHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 33333333333444455566677888889999999999999999999999999999999999999999999999988876
Q ss_pred hhccc--hhH--H---HHHHHHHHHhhhhh-hhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC
Q 013144 182 PWAAD--TSL--L---ALLAMRAVVGLAEG-VALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (449)
Q Consensus 182 ~~~~~--~~~--~---~l~~~r~l~G~g~g-~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 253 (449)
..... ... | ..+++.++..++.+ +.-|...-+.+|.+|++.|+.++++......+..++-...-..+.+.+|
T Consensus 353 ~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g 432 (485)
T KOG0569|consen 353 SIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG 432 (485)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 55411 111 1 12334444333333 2367888999999999999999999999999988888888778877777
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 013144 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRH 283 (449)
Q Consensus 254 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (449)
- +.|+..++.+++..+..++..||++.+.
T Consensus 433 ~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 433 P-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred c-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 6 7888888898888888899998887543
No 188
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.22 E-value=3.1e-10 Score=109.22 Aligned_cols=160 Identities=18% Similarity=0.117 Sum_probs=129.2
Q ss_pred hhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcC-----CchHHHHHHHHHHHHHHHhhhccc--hhHH
Q 013144 118 MSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG-----GKIIMAWGVALWSLATFLTPWAAD--TSLL 190 (449)
Q Consensus 118 ~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~l~~~~~~~~i~~~~~~~~~~--~~~~ 190 (449)
.....+.+++++|+++.+.....+...+...+ .+++|.++|-+. ||+-++++.++..++.+.++..+. .+..
T Consensus 9 ~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 9 RLAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 34567889999999999999999888888755 555799999863 556677777777666665555421 4577
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHhhccC--cchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHH
Q 013144 191 ALLAMRAVVGLAEGVALPAMNNMVARWFP--QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLW 268 (449)
Q Consensus 191 ~l~~~r~l~G~g~g~~~~~~~~~i~~~~~--~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~ 268 (449)
...+.-++..+|.+....++-+++.|... ++.||...+.......+|.+++..++|.+.+..++++.|.+.+++..+.
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLM 167 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHH
Confidence 77777888999999999999999999983 3448889999999999999999999999999999999999988887777
Q ss_pred HHHHHHhcCC
Q 013144 269 VLVWLSATSS 278 (449)
Q Consensus 269 ~~~~~~~~~~ 278 (449)
.+..++..+|
T Consensus 168 ~~~~~~~~~e 177 (433)
T PF03092_consen 168 LIVALFLLEE 177 (433)
T ss_pred HHHHHHhhhh
Confidence 7666676665
No 189
>PRK09848 glucuronide transporter; Provisional
Probab=99.22 E-value=4.5e-10 Score=109.53 Aligned_cols=138 Identities=19% Similarity=0.153 Sum_probs=110.7
Q ss_pred hhhhhhhhh-hhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q 013144 117 VMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAM 195 (449)
Q Consensus 117 ~~~~~~~~l-~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~ 195 (449)
......+.+ ++.+|.++...++......++..++.++++++.||+|+|+++.++.++..++.++..+.+..+++.+++.
T Consensus 246 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 325 (448)
T PRK09848 246 AVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVA 325 (448)
T ss_pred HHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHH
Confidence 333344544 4456766655555555556778889999999999999999999999998888877776533577778888
Q ss_pred HHHHhhhhhhhhhHHHHHHhhccCcc-------hhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCc
Q 013144 196 RAVVGLAEGVALPAMNNMVARWFPQT-------ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (449)
Q Consensus 196 r~l~G~g~g~~~~~~~~~i~~~~~~~-------~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 254 (449)
.++.|+|.+...+...++.+|..|.+ ++|...++.+....+|..+|+.+.+.+.+..|+
T Consensus 326 ~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 326 LAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88999999999999999999988754 359999999999999999999999998877665
No 190
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.21 E-value=1.9e-10 Score=110.71 Aligned_cols=159 Identities=14% Similarity=0.027 Sum_probs=109.4
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhc--CCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchH-HHHHHHHHHHHHHHh
Q 013144 105 ALALALCNADRVVMSVAIVPLSLAH--GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKII-MAWGVALWSLATFLT 181 (449)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~-l~~~~~~~~i~~~~~ 181 (449)
.+.+++.......+...+|.+.+++ +.+..+.++..+...++..++.++.|+++||++||+. +....++..++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~ 327 (412)
T TIGR02332 248 TLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLA 327 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHH
Confidence 3333444444445556677777764 5677889999999999999999999999999998774 444444444443322
Q ss_pred hhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC-chHHHHH
Q 013144 182 PWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVI 260 (449)
Q Consensus 182 ~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~ 260 (449)
... ++....+++-.+.++|.....+.......|.+|+++|+.+.|+.+....+|.+++|.+.+.+.+..| |++.|++
T Consensus 328 ~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~ 405 (412)
T TIGR02332 328 SAT--DHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWF 405 (412)
T ss_pred Hhc--CCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHH
Confidence 222 2222222222233333333344445555788999999999999999999999999999999999875 9999987
Q ss_pred HHHHH
Q 013144 261 FGLSG 265 (449)
Q Consensus 261 ~~~~~ 265 (449)
.++..
T Consensus 406 ~~~~~ 410 (412)
T TIGR02332 406 VAALL 410 (412)
T ss_pred HHHHH
Confidence 66543
No 191
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.20 E-value=4.5e-10 Score=102.70 Aligned_cols=173 Identities=17% Similarity=0.117 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHhHhhhhhhhhh-hhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHh
Q 013144 103 MLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (449)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~ 181 (449)
.+++.++..+.....++..+|. ++++|++++.+.|.+...+.+...+..+.+|+++||+|.+|++.+....++++..+.
T Consensus 222 ~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l 301 (417)
T COG2223 222 LLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALL 301 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHH
Confidence 3444444444444455555555 567899999999999999999999999999999999999999999999999988887
Q ss_pred hhccc-----hhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC-ch
Q 013144 182 PWAAD-----TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IF 255 (449)
Q Consensus 182 ~~~~~-----~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr 255 (449)
.+..+ .+....++.-+..++..|.-......++..++| ++-|.+.|+.+...++|...-|..-+...+..| +.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~ 380 (417)
T COG2223 302 SLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYT 380 (417)
T ss_pred HccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHH
Confidence 66521 233333333333444444444456677777885 588999999999999999999999898888777 89
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 013144 256 GPFVIFGLSGFLWVLVWLSAT 276 (449)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~~~~ 276 (449)
..|++.....++..+..+...
T Consensus 381 ~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 381 GAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999998887777666544443
No 192
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.20 E-value=4e-10 Score=123.02 Aligned_cols=143 Identities=17% Similarity=0.179 Sum_probs=122.5
Q ss_pred hhhhhhhcCCCch-hhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHh
Q 013144 122 IVPLSLAHGWSRS-FSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (449)
Q Consensus 122 ~~~l~~~~~~~~~-~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G 200 (449)
.+.+.+.+|.+.. +.+++.+...++..++.++.|++.||+++|+++.++.++.+++.++..+. .+.+.++++.++.|
T Consensus 256 ~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g 333 (1146)
T PRK08633 256 PAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA--PSLASVLVLFFLFG 333 (1146)
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHH
Confidence 3445567899998 99999999999999999999999999999999999999888888888887 78888889999999
Q ss_pred hhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh-hCchHHHHHHHHHHH
Q 013144 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-AGIFGPFVIFGLSGF 266 (449)
Q Consensus 201 ~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~ 266 (449)
++.+...+...+++.+..|+++||+++++.+....+|.++++.+++.+... +++...|++.+.+.+
T Consensus 334 ~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 334 FSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTL 400 (1146)
T ss_pred HHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 999998999999999999999999999999999999998888888776542 345556665554443
No 193
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.19 E-value=4.1e-10 Score=103.01 Aligned_cols=154 Identities=16% Similarity=0.179 Sum_probs=131.4
Q ss_pred hhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 013144 118 MSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (449)
Q Consensus 118 ~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 197 (449)
.......-..++|++..+..++.....+..+++++++|++.||+|.|+++..++++..+.++..-+. ..-..+.++-.
T Consensus 272 l~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~--~~~~~f~i~gl 349 (438)
T COG2270 272 LAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFL--EGELDFWILGL 349 (438)
T ss_pred HHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHc--cccHHHHHHHH
Confidence 3334444556999999999999999999999999999999999999999999999999998887777 66666677778
Q ss_pred HHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC-chHHHHHHHHHHHHHHHHHH
Q 013144 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLVWL 273 (449)
Q Consensus 198 l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~ 273 (449)
+.|+..|..+..+.++.++..|+++-++.+|+++.....+..+||.+.+.+.+..| -|..+....++..+.+++.+
T Consensus 350 l~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~ 426 (438)
T COG2270 350 LVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLL 426 (438)
T ss_pred HHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEE
Confidence 99999999999999999999999999999999999999999999999999988654 67777666555555444433
No 194
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.18 E-value=1.3e-09 Score=107.56 Aligned_cols=131 Identities=22% Similarity=0.277 Sum_probs=112.5
Q ss_pred hhhh-hhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhc-cchhHHHHHHHHH
Q 013144 120 VAIV-PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA-ADTSLLALLAMRA 197 (449)
Q Consensus 120 ~~~~-~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~-~~~~~~~l~~~r~ 197 (449)
...| .+++.+|.++.+.|+....+.++..++.++.|++.||+|+|+.+..+.++.+++.++.... ..++.+...+..+
T Consensus 280 ~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 359 (495)
T PRK14995 280 LLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMA 359 (495)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Confidence 3444 4555689999999999999999999999999999999999999999998888877655432 1245666777889
Q ss_pred HHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh
Q 013144 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (449)
Q Consensus 198 l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~ 250 (449)
+.|+|.|...+.....+.+..|+++++.+.++.+...++|..+|+.+.+.+.+
T Consensus 360 l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 360 LLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999899999999999999999999999999999999999988865
No 195
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.17 E-value=4.7e-10 Score=110.72 Aligned_cols=134 Identities=15% Similarity=0.229 Sum_probs=114.6
Q ss_pred hhhhhhhh-hhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhh--ccchhHHHHHHH
Q 013144 119 SVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW--AADTSLLALLAM 195 (449)
Q Consensus 119 ~~~~~~l~-~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~--~~~~~~~~l~~~ 195 (449)
....|.+. +.+|.++.+.++......++..++.++.|++.||+|||+.+.++..+.+++..+..+ .+..+++.+++.
T Consensus 275 ~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (485)
T TIGR00711 275 FYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALP 354 (485)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHH
Confidence 33455544 457999999999999999999999999999999999999999999988888887662 222467777788
Q ss_pred HHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh
Q 013144 196 RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (449)
Q Consensus 196 r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 252 (449)
.++.|+|.+...+.......+..|+++|+.+.++.+....+|..+|+.+.+.+.++.
T Consensus 355 ~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 355 QFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999888777888888899999999999999999999999999999987653
No 196
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.16 E-value=1.7e-09 Score=103.40 Aligned_cols=160 Identities=16% Similarity=0.103 Sum_probs=110.3
Q ss_pred hhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhc-c---chhHHHH
Q 013144 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA-A---DTSLLAL 192 (449)
Q Consensus 117 ~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~-~---~~~~~~l 192 (449)
.++..+|.+.++ ..+.........+..+...+..+++|+++||+|+|+++.++.+...++....... + ..+++.+
T Consensus 270 g~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~ 348 (462)
T PRK15034 270 GFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAF 348 (462)
T ss_pred HHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHH
Confidence 344445554433 2233333333445678888999999999999999999999998777776442222 1 1356666
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhccCc---------------------chhhHHHHHHHHhhhhhhHhHHHHHHHHHhh
Q 013144 193 LAMRAVVGLAEGVALPAMNNMVARWFPQ---------------------TERARAVAIAMGGFTSGNAIGLVLSPILMSQ 251 (449)
Q Consensus 193 ~~~r~l~G~g~g~~~~~~~~~i~~~~~~---------------------~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~ 251 (449)
.+.-+...++.|........++.+++|+ ++-|.+.|+.+....+|..+-|.+-+...+.
T Consensus 349 ~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~ 428 (462)
T PRK15034 349 YAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNM 428 (462)
T ss_pred HHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHH
Confidence 6666665566666666777788888864 2578899999999999999999887777766
Q ss_pred hC-chHHHHHHHHHHHHHHHHHHHhcC
Q 013144 252 AG-IFGPFVIFGLSGFLWVLVWLSATS 277 (449)
Q Consensus 252 ~g-wr~~f~~~~~~~~~~~~~~~~~~~ 277 (449)
.| +...|+...+..++..++.+...-
T Consensus 429 ~g~~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 429 TGSPVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44 888888877776666665555543
No 197
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.15 E-value=2.4e-09 Score=102.59 Aligned_cols=134 Identities=16% Similarity=0.077 Sum_probs=97.0
Q ss_pred hhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhh
Q 013144 125 LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEG 204 (449)
Q Consensus 125 l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g 204 (449)
+.+++|.++.+.+.+.+...++..++.++.|++.||+|||+.+.++..+..++.++..+. ++.+..++.-.+.+.|.+
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~~ 307 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALS--PSHAVSLFGITLICAGFS 307 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999999999999988888887776 555444444444444444
Q ss_pred hhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHH
Q 013144 205 VALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSG 265 (449)
Q Consensus 205 ~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~ 265 (449)
...+. ....+..|.++|+ +..+....++..+|+.+++++.+..|+.....+.+++.
T Consensus 308 ~~~~~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 308 VGFGV--AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred HHhHH--HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 33333 2334455544543 44445566788888888888888888876555554433
No 198
>PRK10133 L-fucose transporter; Provisional
Probab=99.15 E-value=2.2e-09 Score=103.98 Aligned_cols=140 Identities=11% Similarity=0.100 Sum_probs=113.8
Q ss_pred hhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhh
Q 013144 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (449)
Q Consensus 126 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 205 (449)
++.+|.++.+.++....+.++..++.++.|++.||+|+|+++..+.++..++.++..+. ++.+ .+..-.+.|++.+.
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~--~~~~-~~~~~~l~glg~~~ 363 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA--GGHV-GLIALTLCSAFMSI 363 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc--CChH-HHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999999999999988887777666665 4432 34556789999999
Q ss_pred hhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC-chHHHHHHHHHHHHHHH
Q 013144 206 ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVL 270 (449)
Q Consensus 206 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~ 270 (449)
.+|...+...|..| ++.+.+.++... ..+|..++|.+.|.+.+..| -|..|++..+..+....
T Consensus 364 i~P~~~s~a~~~~~-~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 364 QYPTIFSLGIKNLG-QDTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HHHHHHHHHHcccc-hhhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 99999999999886 456777777764 44788889999999999887 78888765555444333
No 199
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.14 E-value=1.8e-07 Score=89.66 Aligned_cols=273 Identities=10% Similarity=-0.051 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhhhhcCC-----CchhhHHHHHHHHHHHHHh-hccchhhhhhcCCchHHHHHHHHH
Q 013144 101 VSMLALALALCNADRVVMSVAIVPLSLAHGW-----SRSFSGIVQSSFLWGYLVS-PIAGGTLVDYYGGKIIMAWGVALW 174 (449)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~g~~~s~~~~~~~~~-~~~~G~l~dr~Grr~~l~~~~~~~ 174 (449)
+..+.+..++..++.+ ++-++++.+.+ ....+.++-+...+...+. .++.+++++|++|++++-+....+
T Consensus 9 ~~~~~l~fF~il~~Y~----iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F 84 (472)
T TIGR00769 9 FLPLFLMFFCILFNYT----ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPF 84 (472)
T ss_pred HHHHHHHHHHHHHHHH----HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHH
Confidence 3344444444444333 34556666654 3467899999888877776 888999999999999988887777
Q ss_pred HHHHHHhhhc--cch---------------------------hHHHHHHHHHHHhhhhhhhhh-HHHHHHhhccCcchhh
Q 013144 175 SLATFLTPWA--ADT---------------------------SLLALLAMRAVVGLAEGVALP-AMNNMVARWFPQTERA 224 (449)
Q Consensus 175 ~i~~~~~~~~--~~~---------------------------~~~~l~~~r~l~G~g~g~~~~-~~~~~i~~~~~~~~rg 224 (449)
.+...++++. +.+ +.|...+..+...+-...... .-..+++|.++.++-.
T Consensus 85 ~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qak 164 (472)
T TIGR00769 85 LGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAK 164 (472)
T ss_pred HHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 7776665554 101 133333444455555455554 7788999999999999
Q ss_pred HHHHHHHHhhhhhhHhHHHHHHHHHhh--------hCch----HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHH
Q 013144 225 RAVAIAMGGFTSGNAIGLVLSPILMSQ--------AGIF----GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELE 292 (449)
Q Consensus 225 ~~~~~~~~~~~~G~~~g~~l~~~l~~~--------~gwr----~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (449)
|..++++.+.++|.++++.+..++.+. ..|. +.+.+.++.+++...+.....+....+++..+.++
T Consensus 165 Rfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-- 242 (472)
T TIGR00769 165 RFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYNPAL-- 242 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhh--
Confidence 999999999999999999998888731 1242 23333333334433333333222211111111110
Q ss_pred HHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccc----hhhHhhH
Q 013144 293 YILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQ----ASWFSAV 368 (449)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~~~~~~~ 368 (449)
...+++++.+....++.++++|.++.+++...+++...+.+....-..+.+.+ -++.+ .|.+...
T Consensus 243 ----------~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~-p~~~~~~~f~g~~~~~ 311 (472)
T TIGR00769 243 ----------KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQY-PSPNEYSAFMGDFSTW 311 (472)
T ss_pred ----------ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHH
Confidence 00122234455678899999999999888888887777777665555555543 23322 3334455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 013144 369 PWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 369 ~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.++..++.+++.+++.+|+|-+
T Consensus 312 ~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 312 TGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHHHHHHHHhhHH
Confidence 5566666677778999999877
No 200
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.14 E-value=2.7e-09 Score=102.08 Aligned_cols=140 Identities=19% Similarity=0.153 Sum_probs=114.1
Q ss_pred hhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhh
Q 013144 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAE 203 (449)
Q Consensus 124 ~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~ 203 (449)
.+.+.+|.++.+.|++.+...++..++++..+++.||+++|+++..+.. .++..++.++. ++++..++..++.|++.
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~--~~~~~~~~~~~~~G~~~ 307 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQ--HSLLPAYPLLILIGALG 307 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHH--hHHHHHHHHHHHHHHhh
Confidence 4556789999999999999999999999999999999999998888753 44444455555 77887888888999999
Q ss_pred hhhhhHHHHHHhhccCcch-hhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHH
Q 013144 204 GVALPAMNNMVARWFPQTE-RARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (449)
Q Consensus 204 g~~~~~~~~~i~~~~~~~~-rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~ 267 (449)
+...+...+.+.+..|++. +|++.++.+...++|..++..+.+.+ ...|-+..+++.+...++
T Consensus 308 g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 371 (393)
T PRK11195 308 GFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLV 371 (393)
T ss_pred hhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHH
Confidence 9888888888888766554 79999999999999999999998865 567877777665444333
No 201
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.13 E-value=1.9e-09 Score=102.88 Aligned_cols=138 Identities=15% Similarity=0.168 Sum_probs=103.6
Q ss_pred hhhh-hhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhcc---chhHHHHHHHH
Q 013144 121 AIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA---DTSLLALLAMR 196 (449)
Q Consensus 121 ~~~~-l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~---~~~~~~l~~~r 196 (449)
..|. +.+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+..++.++..+.. .++.+.+++..
T Consensus 228 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (385)
T TIGR00710 228 GAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPM 307 (385)
T ss_pred cChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHH
Confidence 3444 4457899999999999999999999999999999999999999988888877776655431 12345556667
Q ss_pred HHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhh-hhHhHHHHHHHHHhhhCchHHHHH
Q 013144 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS-GNAIGLVLSPILMSQAGIFGPFVI 260 (449)
Q Consensus 197 ~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~-G~~~g~~l~~~l~~~~gwr~~f~~ 260 (449)
++.|++.+...+.......|..| ++|+++.++.+..... |.+.++.++ .+.+..+|...+..
T Consensus 308 ~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 308 MFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS-LIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH-hccccChHHHHHHH
Confidence 88999999889999999999886 6899999998776654 555555544 44443344433333
No 202
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.10 E-value=8.8e-10 Score=103.77 Aligned_cols=126 Identities=19% Similarity=0.225 Sum_probs=109.0
Q ss_pred hhhhhhhhh-hhhcCCC-chhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccc-hhHHHHH
Q 013144 117 VMSVAIVPL-SLAHGWS-RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAAD-TSLLALL 193 (449)
Q Consensus 117 ~~~~~~~~l-~~~~~~~-~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~-~~~~~l~ 193 (449)
......|.+ .+++|.+ ..+.+++.+...+...++.++.|++.||+|+|+.+........++.+...+... ++....+
T Consensus 224 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (352)
T PF07690_consen 224 GFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLI 303 (352)
T ss_dssp HHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHH
T ss_pred HhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 355556664 8889999 799999999999999999999999999999998888888888877777665521 2557777
Q ss_pred HHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHH
Q 013144 194 AMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGL 242 (449)
Q Consensus 194 ~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~ 242 (449)
+.-++.|++.+...+....++.|.+|+++||++.|+.....++|..+||
T Consensus 304 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 304 IALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 7889999999999999999999999999999999999999999999987
No 203
>PRK09669 putative symporter YagG; Provisional
Probab=99.09 E-value=2.4e-09 Score=104.35 Aligned_cols=123 Identities=9% Similarity=0.147 Sum_probs=98.2
Q ss_pred chhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHH
Q 013144 133 RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNN 212 (449)
Q Consensus 133 ~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~ 212 (449)
+...+.+.....+...++.+++++++||+|+|+.+.++.++..+..+...+.+.++.+.+++..++.|++.+...+...+
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a 342 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS 342 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445666677788888999999999999999999988876665444333332267888888889999999999999999
Q ss_pred HHhhccCc-------chhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCch
Q 013144 213 MVARWFPQ-------TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (449)
Q Consensus 213 ~i~~~~~~-------~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr 255 (449)
+++|..+. +..|...+..+....+|..+|+.+++.+.+..|+.
T Consensus 343 m~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 343 MFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99998852 23467889999999999999999999998877763
No 204
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.09 E-value=9.2e-10 Score=107.96 Aligned_cols=172 Identities=14% Similarity=0.076 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhh-hhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHH--------HHHHH
Q 013144 102 SMLALALALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIM--------AWGVA 172 (449)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l--------~~~~~ 172 (449)
...++..+........+...+|.+ .+.+|.+..+.+++.++..++..++.++.|+++||+++|+.. ..+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 343 (465)
T TIGR00894 264 WAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIG 343 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 333444444444444444455654 566899999999999999999999999999999998755321 11111
Q ss_pred HH--HHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh
Q 013144 173 LW--SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (449)
Q Consensus 173 ~~--~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~ 250 (449)
.. ++..+..... ..+.+..++.-.+.+.+.+...+.......|..| +.+|.+.++.+....+|..++|.+.+.+.+
T Consensus 344 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~ 421 (465)
T TIGR00894 344 GLGPGIFAYALPYL-SAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILS 421 (465)
T ss_pred HHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeC
Confidence 11 1111111111 1344444555555566555555555556667775 589999999999999999999999998876
Q ss_pred hh---CchHHHHHHHHHHHHHHHHHHHh
Q 013144 251 QA---GIFGPFVIFGLSGFLWVLVWLSA 275 (449)
Q Consensus 251 ~~---gwr~~f~~~~~~~~~~~~~~~~~ 275 (449)
.. +|+..|++.++..++..++..+.
T Consensus 422 ~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 422 QDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 43 48889988887777766555443
No 205
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.09 E-value=1.1e-09 Score=97.72 Aligned_cols=131 Identities=18% Similarity=0.186 Sum_probs=97.3
Q ss_pred HHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhH--HHHHHHHHHHhhhhhhhhhHHHHHHhhccCc
Q 013144 143 FLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSL--LALLAMRAVVGLAEGVALPAMNNMVARWFPQ 220 (449)
Q Consensus 143 ~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~--~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~ 220 (449)
..+.-.-|.++.+++.||+|||+.|..+.++++++.++......+|. .+++.+|++... .+.+.++|..|.+|.
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg----~fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISG----AFQVAYVYTPEVYPT 465 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhc----hheEEEEecCcccch
Confidence 44556678889999999999999999999999999988766632332 234555655443 355678899999999
Q ss_pred chhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhcCCC
Q 013144 221 TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSST 279 (449)
Q Consensus 221 ~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 279 (449)
+-|+...|..+....+|.++.|+++ +.....-..+..+.+..+++..+...+++-|+
T Consensus 466 avRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 466 AVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 9999999999999999999999998 33333444455556666666666655554443
No 206
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.09 E-value=5.4e-09 Score=102.54 Aligned_cols=141 Identities=13% Similarity=-0.011 Sum_probs=109.2
Q ss_pred hHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhh---ccchhHH
Q 013144 114 DRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW---AADTSLL 190 (449)
Q Consensus 114 ~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~---~~~~~~~ 190 (449)
.........+.+.+....++...+++.+...++..++.+++++++||+|+|+.+.++..+..++.+...+ ...++.+
T Consensus 246 ~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (473)
T PRK10429 246 ASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNAL 325 (473)
T ss_pred HHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHH
Confidence 3334444445555544445667778888888899999999999999999999999888877766555432 2225677
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHhhccC-------cchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCc
Q 013144 191 ALLAMRAVVGLAEGVALPAMNNMVARWFP-------QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (449)
Q Consensus 191 ~l~~~r~l~G~g~g~~~~~~~~~i~~~~~-------~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 254 (449)
.+++.-++.|++.+...+...++++|..+ .++.|..++.......+|..+++.+.|.+.+..|+
T Consensus 326 ~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 326 LIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77888889999999999999999999965 33356689999999999999999999999887665
No 207
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.08 E-value=6.6e-09 Score=95.59 Aligned_cols=157 Identities=31% Similarity=0.497 Sum_probs=129.5
Q ss_pred HHHHHhHhhhhhhhhhhhhhcCCCc--hhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccc
Q 013144 109 ALCNADRVVMSVAIVPLSLAHGWSR--SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAAD 186 (449)
Q Consensus 109 ~~~~~~~~~~~~~~~~l~~~~~~~~--~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~ 186 (449)
+....+........+.+..+++.+. ...++..+.+.++..++.++.|.+.||+|||+.+..+.....++.+++++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~-- 89 (338)
T COG0477 12 LLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALA-- 89 (338)
T ss_pred HHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhC--
Confidence 3333566666777888888877666 589999999999999999999999999999998888887766666777776
Q ss_pred hh--HHHHHHHHHHHhhhhhhhhhHHHHHHhhccCc-chhhHHHHHHHH-hhhhhhHhHHHHHHHHHhh--hCchHHHHH
Q 013144 187 TS--LLALLAMRAVVGLAEGVALPAMNNMVARWFPQ-TERARAVAIAMG-GFTSGNAIGLVLSPILMSQ--AGIFGPFVI 260 (449)
Q Consensus 187 ~~--~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~-~~rg~~~~~~~~-~~~~G~~~g~~l~~~l~~~--~gwr~~f~~ 260 (449)
.+ .+.+++.|+++|++.+...+...+++.|+.|+ ++|+...+.... ...+|..+++.+++.+... .+||+.|..
T Consensus 90 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (338)
T COG0477 90 PNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLL 169 (338)
T ss_pred ccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 54 99999999999999999999999999999987 689999999888 5888999999888777654 579997776
Q ss_pred HHHHHHH
Q 013144 261 FGLSGFL 267 (449)
Q Consensus 261 ~~~~~~~ 267 (449)
.......
T Consensus 170 ~~~~~~~ 176 (338)
T COG0477 170 AALLGLL 176 (338)
T ss_pred HHHHHHH
Confidence 6655543
No 208
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.08 E-value=1.7e-09 Score=117.84 Aligned_cols=147 Identities=15% Similarity=0.126 Sum_probs=118.4
Q ss_pred hhhhh-hhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhc---------------
Q 013144 121 AIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA--------------- 184 (449)
Q Consensus 121 ~~~~l-~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~--------------- 184 (449)
..|.+ .+.+|.++.+.|++.+++.++.+++.++.|++.|++++++.+..+.++.+++.+..++.
T Consensus 247 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (1140)
T PRK06814 247 QLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSIL 326 (1140)
T ss_pred HhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchh
Confidence 44554 45589999999999999999999999999999999888877766666666555433331
Q ss_pred ---cchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh-hhCchHHHHH
Q 013144 185 ---ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QAGIFGPFVI 260 (449)
Q Consensus 185 ---~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~-~~gwr~~f~~ 260 (449)
..++.+.+++..++.|++.+...+...+++.+.+|+++||+++|+.++...+|..+++++++.+.+ ..++...+++
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~ 406 (1140)
T PRK06814 327 VFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILF 406 (1140)
T ss_pred hhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 015667788889999999999999999999999999999999999999999999999999999874 4566766666
Q ss_pred HHHHHHH
Q 013144 261 FGLSGFL 267 (449)
Q Consensus 261 ~~~~~~~ 267 (449)
.+++.++
T Consensus 407 ~~~~~~~ 413 (1140)
T PRK06814 407 IALANLI 413 (1140)
T ss_pred HHHHHHH
Confidence 5554433
No 209
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.08 E-value=9e-10 Score=104.07 Aligned_cols=119 Identities=14% Similarity=0.118 Sum_probs=97.4
Q ss_pred hhhhhhhhhhhhcCCCchhhHHHHHHHH-HHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhc--cc-------
Q 013144 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFL-WGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA--AD------- 186 (449)
Q Consensus 117 ~~~~~~~~l~~~~~~~~~~~g~~~s~~~-~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~--~~------- 186 (449)
......|.+.+++|.++.+.+.+.+... ++..++.+++|++.||+|||+.+..+.++.+++..+..+. ..
T Consensus 227 ~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (356)
T TIGR00901 227 AATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITF 306 (356)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc
Confidence 3444556665669999999998888766 6788999999999999999999998888887776654432 11
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhh
Q 013144 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFT 235 (449)
Q Consensus 187 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~ 235 (449)
++.+.+..+.++.+++.+...+...+++.|.+|+++||+.+|+.++..+
T Consensus 307 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 307 PHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 2457788888999999999999999999999999999999999887654
No 210
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.06 E-value=4.5e-09 Score=101.85 Aligned_cols=152 Identities=16% Similarity=0.103 Sum_probs=124.3
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhh
Q 013144 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (449)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 183 (449)
+.+..++............+.+.++.--++...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..+
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~ 309 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFF 309 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHH
Confidence 33334444444445555566666553224467888889999999999999999999999999999999999999999888
Q ss_pred ccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCc-------chhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCch
Q 013144 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQ-------TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (449)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~-------~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr 255 (449)
.+.++.+.+++.-++.|++.+..++...++++|..+. ++.|...+..+....+|..+++.+.+.+.+..|+.
T Consensus 310 ~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 310 LGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 8224999999999999999999999999999999863 34589999999999999999999999988766653
No 211
>PRK11043 putative transporter; Provisional
Probab=99.06 E-value=8.8e-09 Score=99.01 Aligned_cols=135 Identities=19% Similarity=0.234 Sum_probs=103.6
Q ss_pred hhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHh---hhccchhHHHHHHHH
Q 013144 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT---PWAADTSLLALLAMR 196 (449)
Q Consensus 120 ~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~---~~~~~~~~~~l~~~r 196 (449)
...|.+.+++|.++.+.|+....+.++..++.+..+++.||+|+|+.+....+..+++.+.. .....++.+.+++..
T Consensus 224 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (401)
T PRK11043 224 TGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPF 303 (401)
T ss_pred HHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHH
Confidence 34566677789999999999888999999999999999999999987666555544443322 221114566666777
Q ss_pred HHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCch
Q 013144 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (449)
Q Consensus 197 ~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr 255 (449)
.+.|++.+...+...+...|..| ++||++.++.+.....+...++.+.+.+.+.....
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 361 (401)
T PRK11043 304 CVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLT 361 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhH
Confidence 88899999889988888888775 68999999999988888888888888886643333
No 212
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.06 E-value=5.7e-09 Score=98.56 Aligned_cols=159 Identities=12% Similarity=0.034 Sum_probs=108.4
Q ss_pred HHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCc---hHHH-HHHHHHHHHHHHhh
Q 013144 107 ALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK---IIMA-WGVALWSLATFLTP 182 (449)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr---~~l~-~~~~~~~i~~~~~~ 182 (449)
..++.......+..-+|.+.++.|.+.. .+...++..+...++ .++++||.+|| +... ...++.++...+.+
T Consensus 200 ~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~ 275 (368)
T TIGR00903 200 ILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALA 275 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444445567777777777754 566655555555555 47788877654 3323 23444444444445
Q ss_pred hccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHH
Q 013144 183 WAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFG 262 (449)
Q Consensus 183 ~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~ 262 (449)
+. .+....++.-.+.|++.....+...++.+|.+|++.|+++.|+.+....+|.+++|.+.+.+.. |-+..|.+.+
T Consensus 276 ~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~ 351 (368)
T TIGR00903 276 FE--LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLA 351 (368)
T ss_pred Hc--cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHH
Confidence 44 4444555556677777777778888999999999999999999999999999999999887773 7777888877
Q ss_pred HHHHHHHHHHH
Q 013144 263 LSGFLWVLVWL 273 (449)
Q Consensus 263 ~~~~~~~~~~~ 273 (449)
+..++..+..+
T Consensus 352 ~~~~i~~~~~~ 362 (368)
T TIGR00903 352 ILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHH
Confidence 77776665544
No 213
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.05 E-value=3.2e-09 Score=91.51 Aligned_cols=164 Identities=15% Similarity=0.124 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHH-
Q 013144 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA- 177 (449)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~- 177 (449)
.++.+++..+.+..+... ...-..+++++|+++...+.+.+......++.+++.|.++||+|++-..+.+..+..+.
T Consensus 267 w~~~iicv~yyva~fPFi--~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~ 344 (459)
T KOG4686|consen 267 WVLVIICVLYYVAWFPFI--TLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLG 344 (459)
T ss_pred HHHHHHHHHHHHHHHHHh--hhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHH
Confidence 445555555555544333 23344578899999999999999888889999999999999999998777666655444
Q ss_pred HHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC---c
Q 013144 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG---I 254 (449)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g---w 254 (449)
-....+ +++.=+++-.+.|+............++...|+++.|.+.|..++..++|..+.|++++++.+.-| |
T Consensus 345 H~~l~F----t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~ 420 (459)
T KOG4686|consen 345 HSGLFF----TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDN 420 (459)
T ss_pred hhhHHh----hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhh
Confidence 333333 233334556677887766555566778888999999999999999999999999999999998655 4
Q ss_pred hHHHHH-HHHHHHHH
Q 013144 255 FGPFVI-FGLSGFLW 268 (449)
Q Consensus 255 r~~f~~-~~~~~~~~ 268 (449)
--.|.+ .+.+++..
T Consensus 421 le~ffl~~~~~aL~s 435 (459)
T KOG4686|consen 421 LEAFFLIIGLMALTS 435 (459)
T ss_pred HHHHHHHHHHHHHHH
Confidence 334443 34444443
No 214
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.04 E-value=1.2e-08 Score=94.00 Aligned_cols=272 Identities=17% Similarity=0.150 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhh----cCCchHHHH-HHHHHH
Q 013144 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGKIIMAW-GVALWS 175 (449)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~~l~~-~~~~~~ 175 (449)
++.+....+...+.+..-....+++.+++|++....+.+.-...+...+.+++.|..+|| |||||.++. +.+...
T Consensus 34 li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~ 113 (498)
T KOG0637|consen 34 LISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIA 113 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHH
Confidence 334444444445555555566788888999999999999999999999999999999995 898875554 445556
Q ss_pred HHHHHhhhccchh-----------------HHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhH-HHHHHHHhhhhh
Q 013144 176 LATFLTPWAADTS-----------------LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERAR-AVAIAMGGFTSG 237 (449)
Q Consensus 176 i~~~~~~~~~~~~-----------------~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~-~~~~~~~~~~~G 237 (449)
++.++.+++ .+ ...++++--+.=++.-.....+-+++.|...++++.+ +.+.+..+..+|
T Consensus 114 ~~l~Lig~a--aDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 114 VSLFLIGYA--ADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHhhhhhH--hhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhc
Confidence 666666665 32 2334444445555555778889999999997776666 999999999999
Q ss_pred hHhHHHHHHHHHhhhCchHHH---------HHHHHHHHHHHHHHHHhcCCC------CCCCCCCCHHHHHHHHHhccCcc
Q 013144 238 NAIGLVLSPILMSQAGIFGPF---------VIFGLSGFLWVLVWLSATSST------PDRHPQISKYELEYILREKQKPL 302 (449)
Q Consensus 238 ~~~g~~l~~~l~~~~gwr~~f---------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 302 (449)
..+|..+++++ +|+-.| ..++.+-.....-+.+...++ +.++++..+. ++.
T Consensus 192 nvLGY~~g~y~----~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~--~~~-------- 257 (498)
T KOG0637|consen 192 NVLGYALGSYL----GLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKG--TTA-------- 257 (498)
T ss_pred ceeeeeccccc----CceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCc--ccc--------
Confidence 99999988744 544221 111111111111111111111 1111111110 000
Q ss_pred ccCCCCCCCCCchh-HHHhh-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCcccc---------------hh-
Q 013144 303 LMGNKHKPATVIPP-FRRLL-SKMPTWSIIVANAMHSWGFFVILSWMPIYFNF-VYHIDLRQ---------------AS- 363 (449)
Q Consensus 303 ~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~---------------~~- 363 (449)
+.+..+...... +..+. ..|..|.+++...+...+.+.+..+...++.+ .++-++.. .|
T Consensus 258 --~~~~~~~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~ 335 (498)
T KOG0637|consen 258 --RSKSSKLPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGC 335 (498)
T ss_pred --cccccCcchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccch
Confidence 000000000001 11111 23568888899999888888888888887754 34443321 11
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 364 WFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 364 ~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
+=+.+..+...+.+...-++.+|+|-|
T Consensus 336 ~GL~ins~~lgi~S~~~~~l~~~~g~r 362 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYSLLVEKLSRKFGTR 362 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 223344555666677788888888854
No 215
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.03 E-value=1e-08 Score=97.61 Aligned_cols=122 Identities=17% Similarity=0.099 Sum_probs=88.6
Q ss_pred hhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhc--cchhHHHHHHHHHHHhh
Q 013144 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA--ADTSLLALLAMRAVVGL 201 (449)
Q Consensus 124 ~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~--~~~~~~~l~~~r~l~G~ 201 (449)
.+.+++|.++.+.+++.+...++..++.++.|++.||+|||+.+.++..+..+..+..... ...+++.+.++-.+.+.
T Consensus 220 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (377)
T PRK11102 220 VYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVG 299 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3456689999999999999999999999999999999999999988887654433322111 01355555555556566
Q ss_pred hhhhhhhHHHHHHhhccCcchhhHHHHHHHHh-hhhhhHhHHHHHH
Q 013144 202 AEGVALPAMNNMVARWFPQTERARAVAIAMGG-FTSGNAIGLVLSP 246 (449)
Q Consensus 202 g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~-~~~G~~~g~~l~~ 246 (449)
+.+........++.|..| ++++.+.++.... ..+|..+++.+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 300 CVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 666666667777888776 8899999987553 4566666666544
No 216
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.01 E-value=2.1e-08 Score=98.21 Aligned_cols=141 Identities=16% Similarity=0.039 Sum_probs=114.6
Q ss_pred hHHHHHHHHHHHHHhhccchh----hhhh-cCCchHH--HHHHHHHHHHHHHhhhc-------cchhHHHHHHHHHHHhh
Q 013144 136 SGIVQSSFLWGYLVSPIAGGT----LVDY-YGGKIIM--AWGVALWSLATFLTPWA-------ADTSLLALLAMRAVVGL 201 (449)
Q Consensus 136 ~g~~~s~~~~~~~~~~~~~G~----l~dr-~Grr~~l--~~~~~~~~i~~~~~~~~-------~~~~~~~l~~~r~l~G~ 201 (449)
.+++.+...+...+.+++..+ +.+| .+.+... .+|+++.+++.+..++. ...|++++++..++.|+
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 788999999999999888664 4444 2333433 77888888887776641 01699999999999999
Q ss_pred hhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhc
Q 013144 202 AEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (449)
Q Consensus 202 g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 276 (449)
|.....|...+++.+..|++.||+++|++.....+|..+++.+........+|.+.|...++..++..++.++..
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988877777899888888877776666655543
No 217
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.92 E-value=6.8e-09 Score=97.48 Aligned_cols=153 Identities=16% Similarity=0.180 Sum_probs=136.4
Q ss_pred hhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHh
Q 013144 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (449)
Q Consensus 121 ~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G 200 (449)
.+-.-.||++..+..-|........+-++.-++.+++..|+|+-+++.+++.+..+=.+..... +|.|+.+-..+++|
T Consensus 393 FLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L--~n~W~vLPieilqg 470 (618)
T KOG3762|consen 393 FLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL--QNPWMVLPIEILQG 470 (618)
T ss_pred HHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh--cCchheeeHHHHHH
Confidence 3344457778788888888888888888899999999999999999999999999999888888 99999999999999
Q ss_pred hhhhhhhhHHHHHHhhccCcchhhHHHHHHH-HhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHh
Q 013144 201 LAEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (449)
Q Consensus 201 ~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (449)
+..+.+|.++.+|+++..||+-|..+.++.+ ...++|-.+|.++||.+.+.+|-|..|.+.++.+++.+++....
T Consensus 471 it~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 471 ITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred HHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999985 66789999999999999999999999999998888776655544
No 218
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.90 E-value=1.2e-07 Score=85.26 Aligned_cols=178 Identities=16% Similarity=0.109 Sum_probs=138.5
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhc-CCchHHHHH
Q 013144 92 FITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWG 170 (449)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~ 170 (449)
++++..|.+.....+-.+ ..++.-.-+|.+..|.|+|+.+.|++.+...+......+....+.+|. .+|+..+..
T Consensus 205 w~~~~aW~vtLfmGlqS~----~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~ 280 (395)
T COG2807 205 WRSPLAWQVTLFMGLQSL----LYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLA 280 (395)
T ss_pred ccCchhHHHHHHHHhhHH----HHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 444555665544444333 334555568999999999999999999999999999999999999965 578888888
Q ss_pred HHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccC-cchhhHHHHHHHHhhhhhhHhHHHHHHHHH
Q 013144 171 VALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (449)
Q Consensus 171 ~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~ 249 (449)
.+++.+|.+.+.+.+.++++.. -++.|+|.|..++.+..++.+-.+ +++-+...++.+....+=..+||.+.|++.
T Consensus 281 ~~~~l~G~~G~~~~P~~~~~lw---~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lh 357 (395)
T COG2807 281 LLLMLVGLVGLLLAPGQLPILW---ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLH 357 (395)
T ss_pred HHHHHHHHHHHHHhhhhHHHHH---HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHH
Confidence 8888888888877743333333 489999999999999999998875 455566777777777777889999999999
Q ss_pred hhh-CchHHHHHHHHHHHHHHHHHHHhc
Q 013144 250 SQA-GIFGPFVIFGLSGFLWVLVWLSAT 276 (449)
Q Consensus 250 ~~~-gwr~~f~~~~~~~~~~~~~~~~~~ 276 (449)
|.. +|+...+..+...++..+.-+..-
T Consensus 358 Da~gsw~~~~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 358 DATGSWSAPLVLLALATLLMLIFGLRAG 385 (395)
T ss_pred HhcCChHHHHHHHHHHHHHHHHHHhhcc
Confidence 875 499999888888777776665543
No 219
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.89 E-value=2.4e-08 Score=97.49 Aligned_cols=127 Identities=14% Similarity=0.163 Sum_probs=112.0
Q ss_pred hhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhcc--------chhHHHHHHHHHH
Q 013144 127 LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA--------DTSLLALLAMRAV 198 (449)
Q Consensus 127 ~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~--------~~~~~~l~~~r~l 198 (449)
+.+|.++.+.|++.....++.+++....+++.+|++.|+++.++.++.+++.+...... .++.+.++..-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 56899999999999999999999999999999999999999999999998876543110 0334456666789
Q ss_pred HhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC
Q 013144 199 VGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (449)
Q Consensus 199 ~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 253 (449)
.+++.+........++.+..|++++|...++..+..++|..+++.+++.+.++.|
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999998877
No 220
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.88 E-value=6.9e-09 Score=93.93 Aligned_cols=165 Identities=18% Similarity=0.163 Sum_probs=129.6
Q ss_pred HHHHHhHhhhhhhhhh-hhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcC--CchHHHHHHHHHHHHHHHhhhcc
Q 013144 109 ALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG--GKIIMAWGVALWSLATFLTPWAA 185 (449)
Q Consensus 109 ~~~~~~~~~~~~~~~~-l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G--rr~~l~~~~~~~~i~~~~~~~~~ 185 (449)
..........-|.++. +.|.+..+..+.|+..--..+.+.++..+.|.++||++ |-.....+++..++.+....++
T Consensus 280 ~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~- 358 (464)
T KOG3764|consen 280 TFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFA- 358 (464)
T ss_pred hhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhh-
Confidence 3344444455555555 56677866779999999999999999999999999999 5344455555555556666777
Q ss_pred chhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcc------hhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHH
Q 013144 186 DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQT------ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (449)
Q Consensus 186 ~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~------~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~ 259 (449)
+++.++++-++..|++.+...........+..+.+ -.|..-++....+.+|.++||.++|.+.+..|++|...
T Consensus 359 -~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~ 437 (464)
T KOG3764|consen 359 -TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMT 437 (464)
T ss_pred -hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHH
Confidence 99999999999999998887777666666666543 34788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 013144 260 IFGLSGFLWVLVWLSA 275 (449)
Q Consensus 260 ~~~~~~~~~~~~~~~~ 275 (449)
+.++..++...+..++
T Consensus 438 iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 438 IIGILNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999888777665554
No 221
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.87 E-value=1.3e-07 Score=90.84 Aligned_cols=137 Identities=12% Similarity=0.179 Sum_probs=103.1
Q ss_pred hhhhhhhhhc--CCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 013144 120 VAIVPLSLAH--GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (449)
Q Consensus 120 ~~~~~l~~~~--~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 197 (449)
..++...++. +.+....+...+.+..+..++.++.+++.||+++|+++.++.++..+..++..+. ++... +..-+
T Consensus 253 s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~--~~~~~-~~~l~ 329 (410)
T TIGR00885 253 TFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFA--GGHVG-LYCLT 329 (410)
T ss_pred HHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc--CChHH-HHHHH
Confidence 3344444443 4444555666777778899999999999999999999999999999888888877 55444 56667
Q ss_pred HHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh------CchHHHHHH
Q 013144 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA------GIFGPFVIF 261 (449)
Q Consensus 198 l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~------gwr~~f~~~ 261 (449)
+.|++.+..+|...++..+..+++.+....++.. . .+|..++|++.|.+.|.. +.+..|++.
T Consensus 330 ~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~-~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~ 397 (410)
T TIGR00885 330 LCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVM-A-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILP 397 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHH-H-HhccchHHHHHHHHHHHhcccccCccchHHHHH
Confidence 8888888889999999999997555433333333 3 399999999999999954 477777763
No 222
>PRK11462 putative transporter; Provisional
Probab=98.87 E-value=1.5e-07 Score=91.79 Aligned_cols=123 Identities=15% Similarity=0.171 Sum_probs=88.7
Q ss_pred CchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHH
Q 013144 132 SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMN 211 (449)
Q Consensus 132 ~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~ 211 (449)
++...+++.+.+.++.+++.+++++++||+|+|+++..+..+..+..++..+.+..+...+++.-++.|++.+...+...
T Consensus 261 ~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~ 340 (460)
T PRK11462 261 TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQW 340 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455677788888999999999999999999998776655544444443333223343445555677888877777777
Q ss_pred HHHhhccC-------cchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCc
Q 013144 212 NMVARWFP-------QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (449)
Q Consensus 212 ~~i~~~~~-------~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 254 (449)
++++|..+ .++.|..++.......+|..+|+.+++.+.+..|+
T Consensus 341 ~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 341 VMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 78887765 33346666777788999999999999998876665
No 223
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.86 E-value=1.1e-07 Score=91.29 Aligned_cols=127 Identities=17% Similarity=0.142 Sum_probs=96.3
Q ss_pred hhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHH-HHHHHHHHhhhccchhHHHHHHHHHHHhhh
Q 013144 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA-LWSLATFLTPWAADTSLLALLAMRAVVGLA 202 (449)
Q Consensus 124 ~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~-~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g 202 (449)
.+.+.+|.++.+.+++.....++..++.++.+++.||++++........ +..+...........+.+.+.+..++.|++
T Consensus 233 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 312 (394)
T PRK11652 233 LMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFG 312 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 3444589999999999999999999999999999999984333222222 222222222221114567778888999999
Q ss_pred hhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh
Q 013144 203 EGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ 251 (449)
Q Consensus 203 ~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~ 251 (449)
.+...+...++..|.+| +++|.+.++.+....+|..+++.+++.+...
T Consensus 313 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 313 AGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 99999999999999886 6889999999999999999999998887654
No 224
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.83 E-value=4.5e-07 Score=85.92 Aligned_cols=148 Identities=17% Similarity=0.116 Sum_probs=120.4
Q ss_pred HHHHHHHhHhhhhhhhhhhhh-hcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhcc
Q 013144 107 ALALCNADRVVMSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA 185 (449)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~ 185 (449)
..++........+.......+ -+|.++.+..+.......+..++.+++.++.+|+|+|+++.++.++..++.++..+.+
T Consensus 244 ~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 244 MNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred HHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc
Confidence 444444444455555555443 4577777888888888888888899999999999999999999999999999988886
Q ss_pred chhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCc-------chhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCc
Q 013144 186 DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQ-------TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (449)
Q Consensus 186 ~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~-------~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 254 (449)
.++.+.+++..++.++|.+...+...++++|..+- +.-|...+....+.-+|.+++..+.+++.+..|+
T Consensus 324 ~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 324 AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 56899999999999999999999999999988642 3347888888888889999999998888776654
No 225
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.81 E-value=1.5e-07 Score=92.74 Aligned_cols=138 Identities=14% Similarity=0.028 Sum_probs=105.0
Q ss_pred hhHHHHHHHHHHHHHhhccc----hhhhhhcCCchHHHHHHHHHHHHHHHhhhccchh---------HHHHHHHHHHHhh
Q 013144 135 FSGIVQSSFLWGYLVSPIAG----GTLVDYYGGKIIMAWGVALWSLATFLTPWAADTS---------LLALLAMRAVVGL 201 (449)
Q Consensus 135 ~~g~~~s~~~~~~~~~~~~~----G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~---------~~~l~~~r~l~G~ 201 (449)
..+++.+...+...+..++. +++.+|++..+.+.+++++.+++.+..++. .+ .++++...++.|+
T Consensus 317 ~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~--~~~~~~~~~vs~~~~~~~~~l~~~ 394 (500)
T PRK09584 317 EPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLG--AKFANDAGIVSVNWLIASYGLQSI 394 (500)
T ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHH--HHhcCCCCccCHHHHHHHHHHHHH
Confidence 35677777776666666665 666777777788999999999998887766 44 5688999999999
Q ss_pred hhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh----------hhCchHHHHHHHHHHHHHHHH
Q 013144 202 AEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS----------QAGIFGPFVIFGLSGFLWVLV 271 (449)
Q Consensus 202 g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~----------~~gwr~~f~~~~~~~~~~~~~ 271 (449)
|.+...|...+++.+..|++.||+++|++.....+|..++..+...... ..+..+.|...++.+++..++
T Consensus 395 ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~ 474 (500)
T PRK09584 395 GELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVL 474 (500)
T ss_pred HHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998888777777777666543211 113567787777766554444
Q ss_pred HHH
Q 013144 272 WLS 274 (449)
Q Consensus 272 ~~~ 274 (449)
.+.
T Consensus 475 ~~~ 477 (500)
T PRK09584 475 MLL 477 (500)
T ss_pred HHH
Confidence 443
No 226
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.78 E-value=5.5e-06 Score=78.65 Aligned_cols=288 Identities=13% Similarity=0.008 Sum_probs=166.7
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhhhhcCC-CchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHH
Q 013144 101 VSMLALALALCNADRVVMSVAIVPLSLAHGW-SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (449)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~ 179 (449)
...+....++...+.-++....+.+..+..- +---.+...-.-.+..+++++..|.+.||..|.+++-.+.+..-++..
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 3456677778888888888888887777642 333445555566677788888999999999999987777665444433
Q ss_pred Hhhh------ccch-------hHHHHHHHHHHHhhhhhhh-hhHHHHHHhhcc------CcchhhHHHHHHHHhhhhhhH
Q 013144 180 LTPW------AADT-------SLLALLAMRAVVGLAEGVA-LPAMNNMVARWF------PQTERARAVAIAMGGFTSGNA 239 (449)
Q Consensus 180 ~~~~------~~~~-------~~~~l~~~r~l~G~g~g~~-~~~~~~~i~~~~------~~~~rg~~~~~~~~~~~~G~~ 239 (449)
+.+. ...+ -+..+++.-.+.|.-.-.. .....++=.||. +++.+.+.++..--.=-+--+
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckl 163 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKL 163 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHH
Confidence 2211 1101 1122222222222211111 111222223443 334455666666555566789
Q ss_pred hHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHH----HhcCCCCCCCCCCCHHHHHHHHHhccCccccCCC-------C
Q 013144 240 IGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWL----SATSSTPDRHPQISKYELEYILREKQKPLLMGNK-------H 308 (449)
Q Consensus 240 ~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 308 (449)
++|++.|.+.+..+.+...++.+...++..++=+ ...+..|+-..+.++++.+...+........... +
T Consensus 164 laPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (432)
T PF06963_consen 164 LAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWN 243 (432)
T ss_pred HHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHH
Confidence 9999999999988988888777777666544322 2222333221111111100000000000000000 0
Q ss_pred CCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHH
Q 013144 309 KPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI 388 (449)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 388 (449)
.-+....+|+..+++|.+.......++ ++...++...+..|+... |+++...|.+-....+.++.+.++..++.+|+|
T Consensus 244 ~~~~~~~~w~~Y~~q~vflas~alalL-Y~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riG 321 (432)
T PF06963_consen 244 PLRTIIRGWRTYFRQPVFLASFALALL-YFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIG 321 (432)
T ss_pred HHHHHhccHHHHHhCHHHHHHHHHHHH-HHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 001123355666766655544444444 444566778889999986 999999999999999999999999999999998
Q ss_pred Hh
Q 013144 389 QR 390 (449)
Q Consensus 389 ~~ 390 (449)
..
T Consensus 322 lv 323 (432)
T PF06963_consen 322 LV 323 (432)
T ss_pred ch
Confidence 65
No 227
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.77 E-value=7.1e-08 Score=91.44 Aligned_cols=113 Identities=15% Similarity=0.083 Sum_probs=87.8
Q ss_pred hhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccch--hHHHHHHHHHHHhh
Q 013144 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADT--SLLALLAMRAVVGL 201 (449)
Q Consensus 124 ~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~--~~~~l~~~r~l~G~ 201 (449)
.+.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+......+..+..+...+ +.+.+++.-.+.++
T Consensus 251 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (366)
T TIGR00886 251 FFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFF 330 (366)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHH
Confidence 4456689999999999999999999999999999999999988887777766666555443212 56665555566666
Q ss_pred hhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhh
Q 013144 202 AEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSG 237 (449)
Q Consensus 202 g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G 237 (449)
+.|...+...+++.+..| +++|.+.|+.+...++|
T Consensus 331 ~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 331 FSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred Hhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 666666667778888886 79999999999887776
No 228
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.74 E-value=3.9e-07 Score=83.27 Aligned_cols=160 Identities=19% Similarity=0.213 Sum_probs=127.4
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhh-cCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhh
Q 013144 105 ALALALCNADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (449)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 183 (449)
.++.|+...........++.+.++ .|.++.+.+...+.+..+.++|.++.-++..|+...|.+.+..++..+-++..++
T Consensus 242 vl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l 321 (422)
T COG0738 242 VLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVAL 321 (422)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444455555566666555 8999999999999999999999999999999999999999999888888888888
Q ss_pred ccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHH
Q 013144 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (449)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~ 263 (449)
. ++...+ .+-++.|+..+..+|...+...+..| ++ ....|..-....+|.++-|.+.|++.|..|-...+.....
T Consensus 322 ~--~g~v~~-~~l~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pl 396 (422)
T COG0738 322 I--GGVVAL-YALFLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPL 396 (422)
T ss_pred h--cChHHH-HHHHHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 8 775444 44578899999999999999999998 34 3444445555678999999999999999998888886666
Q ss_pred HHHHHH
Q 013144 264 SGFLWV 269 (449)
Q Consensus 264 ~~~~~~ 269 (449)
+|.+.+
T Consensus 397 lc~lyV 402 (422)
T COG0738 397 LCYLYV 402 (422)
T ss_pred HHHHHH
Confidence 666655
No 229
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.67 E-value=1.8e-06 Score=79.58 Aligned_cols=154 Identities=16% Similarity=0.078 Sum_probs=124.3
Q ss_pred hhhhhhh-hhhcCCCchhhHHHHHHHHHHHHHhhccchhhhh-hcCCchHHHHHHHHHHHHHHHhhhc-cchhHHHHHHH
Q 013144 119 SVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD-YYGGKIIMAWGVALWSLATFLTPWA-ADTSLLALLAM 195 (449)
Q Consensus 119 ~~~~~~l-~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~d-r~Grr~~l~~~~~~~~i~~~~~~~~-~~~~~~~l~~~ 195 (449)
.+++.++ .+-||++..+..-+...+..|..++-...|++.. |.++|+.-.+++....++..+..++ ...+.+.+...
T Consensus 228 D~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~ 307 (403)
T PF03209_consen 228 DVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPG 307 (403)
T ss_pred HHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 3444444 4558999999999999999999999999999988 6778888888888888877664443 22678899999
Q ss_pred HHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh----------hCchHHHHHHHHHH
Q 013144 196 RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ----------AGIFGPFVIFGLSG 265 (449)
Q Consensus 196 r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~----------~gwr~~f~~~~~~~ 265 (449)
-++.|++.|.......+..-+...+++-|..+|.+.....++..+|..+++.+.|. .+|-.+|.+-++..
T Consensus 308 ~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll 387 (403)
T PF03209_consen 308 VFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLL 387 (403)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998763 23555666665555
Q ss_pred HHHHHHH
Q 013144 266 FLWVLVW 272 (449)
Q Consensus 266 ~~~~~~~ 272 (449)
++.+++.
T Consensus 388 ~~a~~ll 394 (403)
T PF03209_consen 388 LAALVLL 394 (403)
T ss_pred HHHHHHH
Confidence 5444433
No 230
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.66 E-value=2.8e-10 Score=111.23 Aligned_cols=163 Identities=16% Similarity=0.172 Sum_probs=111.9
Q ss_pred hhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhh--hc-cch-----h
Q 013144 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP--WA-ADT-----S 188 (449)
Q Consensus 117 ~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~--~~-~~~-----~ 188 (449)
......+.+.++.+.+.. -+......+...++.++...+.||+|||+.++.+..+.+++.+..+ .. ..+ +
T Consensus 271 ~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (451)
T PF00083_consen 271 FIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWS 348 (451)
T ss_pred cccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 444456777777777666 2222344455566777778999999999999999999888877764 11 111 2
Q ss_pred HHHHHHHHHH-HhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHH
Q 013144 189 LLALLAMRAV-VGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (449)
Q Consensus 189 ~~~l~~~r~l-~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~ 267 (449)
+..+...... .+++. +..+....+.+|.+|.+.|+.+.++......++.++++.+...+.+..+-...+++.+.++++
T Consensus 349 ~~~i~~~~l~~~~~~~-g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i 427 (451)
T PF00083_consen 349 ILSIVFLALFFAFFSL-GWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLI 427 (451)
T ss_pred cccceeeeeccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHH
Confidence 2222222221 22222 335666788899999999999999999999999999999888887776634556666666666
Q ss_pred HHHHHHHhcCCCCCC
Q 013144 268 WVLVWLSATSSTPDR 282 (449)
Q Consensus 268 ~~~~~~~~~~~~~~~ 282 (449)
..++.+++.||+..+
T Consensus 428 ~~i~~~~~lpET~g~ 442 (451)
T PF00083_consen 428 AIIFVYFFLPETKGK 442 (451)
T ss_pred HHhheeEEEeeCCCC
Confidence 667777777877653
No 231
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.66 E-value=1.1e-06 Score=86.17 Aligned_cols=140 Identities=16% Similarity=0.026 Sum_probs=107.5
Q ss_pred hHHHHHHHHHHHHHhhccchhhhhhcCCchH-------HHHHHHHHHHHHHHhh-----hc---cchhHHHHHHHHHHHh
Q 013144 136 SGIVQSSFLWGYLVSPIAGGTLVDYYGGKII-------MAWGVALWSLATFLTP-----WA---ADTSLLALLAMRAVVG 200 (449)
Q Consensus 136 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~-------l~~~~~~~~i~~~~~~-----~~---~~~~~~~l~~~r~l~G 200 (449)
.+++.+...+...+..++.+++.||+|+|+. +.+|+++.+++.+..+ +. ...++++++..-++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 4667777778888889999999999999974 7778787777764321 11 1146788888999999
Q ss_pred hhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh----------hhCchHHHHHHHHHHHHHHH
Q 013144 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS----------QAGIFGPFVIFGLSGFLWVL 270 (449)
Q Consensus 201 ~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~----------~~gwr~~f~~~~~~~~~~~~ 270 (449)
+|.+...+...+++.+..|++.++.++|++.....+|..+|..++..... .-...+.|...++.+++..+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888865521 01245666666666655555
Q ss_pred HHHHh
Q 013144 271 VWLSA 275 (449)
Q Consensus 271 ~~~~~ 275 (449)
+.+..
T Consensus 471 ~~~~~ 475 (489)
T PRK10207 471 VMALM 475 (489)
T ss_pred HHHHH
Confidence 44443
No 232
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.65 E-value=1.3e-06 Score=84.10 Aligned_cols=151 Identities=12% Similarity=-0.002 Sum_probs=100.5
Q ss_pred hhhhhhhhhh-hhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhc---cchhHHHH
Q 013144 117 VMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA---ADTSLLAL 192 (449)
Q Consensus 117 ~~~~~~~~l~-~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~---~~~~~~~l 192 (449)
.+....|.+. +.+|.++.+.++.......+..++..+.+++.++.++++.+.....+..++.++.... ..++++.+
T Consensus 236 ~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~ 315 (413)
T PRK15403 236 SWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWS 315 (413)
T ss_pred HHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHH
Confidence 4444556554 4569999999999888888888888888887755555444333333333333322211 11445556
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHH
Q 013144 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWV 269 (449)
Q Consensus 193 ~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 269 (449)
++..++.|+|.+...+......- .-....+|++.++.+.....+..+++.+++++.++ +-++.|...+++..+..
T Consensus 316 ~~~~~l~~~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~ 390 (413)
T PRK15403 316 VLGTSLYAFGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVIV 390 (413)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHH
Confidence 77888899999888887775332 22233579999999998888999999999988766 66777766655544433
No 233
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.64 E-value=3.6e-06 Score=79.88 Aligned_cols=106 Identities=15% Similarity=0.135 Sum_probs=94.5
Q ss_pred HHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccC
Q 013144 140 QSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFP 219 (449)
Q Consensus 140 ~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~ 219 (449)
.++....+.++.++.+.+.|+.|.|+.|.++..++....+..-+ .|-+.+++.-.+.|+|.+..+..--.+++|..+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~---~N~y~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF---PNSYYLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh---cchHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence 67778888899999999999999999999999999988877654 578888999999999999999999999999999
Q ss_pred cchhhHHHHHHHHhhhhhhHhHHHHHHHH
Q 013144 220 QTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (449)
Q Consensus 220 ~~~rg~~~~~~~~~~~~G~~~g~~l~~~l 248 (449)
++++.+..++.......+.++|..+...+
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 99999999999999988888887665444
No 234
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.64 E-value=1.1e-05 Score=75.28 Aligned_cols=137 Identities=15% Similarity=0.176 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHh
Q 013144 136 SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVA 215 (449)
Q Consensus 136 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~ 215 (449)
.+.+.-+-.+...+..+.+.++.+|+.-+.=..++.++..++.++.+++ ++.+.=+++-++.+++.|........+..
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~--~~v~~~l~Gv~las~ssg~GE~tfL~lt~ 138 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFS--PSVWVRLLGVVLASLSSGLGEVTFLSLTH 138 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeec--cchhHHHHHHHHHhhhhhhhHHHHHHHHH
Confidence 3445556667777777778888999886666666777888899999998 99999999999999999988888888654
Q ss_pred hccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCc--hHHHHHHHHHHHHHHHHHHHhcCCCC
Q 013144 216 RWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI--FGPFVIFGLSGFLWVLVWLSATSSTP 280 (449)
Q Consensus 216 ~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (449)
.+++ ..++-++++.+.++++|+..-..+.+ .|+ |..+.+...+.++..+..++..|.++
T Consensus 139 -~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~ 199 (402)
T PF02487_consen 139 -FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPP 199 (402)
T ss_pred -hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 5653 35788999999999999888766666 565 77888877777666666666665443
No 235
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.61 E-value=0.00017 Score=69.81 Aligned_cols=280 Identities=11% Similarity=-0.005 Sum_probs=166.7
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHH-HHHHhhccchhhhhhcCCchHHHHHHHHHH
Q 013144 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLW-GYLVSPIAGGTLVDYYGGKIIMAWGVALWS 175 (449)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 175 (449)
.+..+..+.+..++..++....-..-..+.-.- ..+..+.++=....+ +..+...+..+++++++|.+++-+....+.
T Consensus 22 E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~-~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~ 100 (491)
T PF03219_consen 22 ELKKFLPLALMFFFILFNYTILRDLKDTLVVTA-QGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFL 100 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEec-CChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 344555566666666655444433332222111 145566666554444 344556778999999999998887777777
Q ss_pred HHHHHhhhc--c-----ch----------------------hHHHHHHHHHHHhhhhhhhhh-HHHHHHhhccCcchhhH
Q 013144 176 LATFLTPWA--A-----DT----------------------SLLALLAMRAVVGLAEGVALP-AMNNMVARWFPQTERAR 225 (449)
Q Consensus 176 i~~~~~~~~--~-----~~----------------------~~~~l~~~r~l~G~g~g~~~~-~~~~~i~~~~~~~~rg~ 225 (449)
....+.++. | ++ +.|.+.+..+..-+-.....+ .-..+.+|.++.+|-.+
T Consensus 101 ~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKR 180 (491)
T PF03219_consen 101 GFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKR 180 (491)
T ss_pred HHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 666665553 0 01 122223333333333333333 45788999999999999
Q ss_pred HHHHHHHhhhhhhHhHHHHHHHHHh---------hhCchHHHHH----HHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHH
Q 013144 226 AVAIAMGGFTSGNAIGLVLSPILMS---------QAGIFGPFVI----FGLSGFLWVLVWLSATSSTPDRHPQISKYELE 292 (449)
Q Consensus 226 ~~~~~~~~~~~G~~~g~~l~~~l~~---------~~gwr~~f~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (449)
..+++..+.++|.+++..+..++.+ ...|...+.. ..+.+++...+.....++..+++...+...
T Consensus 181 fYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~~~~-- 258 (491)
T PF03219_consen 181 FYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFYPSAK-- 258 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchhhh--
Confidence 9999999999999999999888877 1235543322 122222222222222222111111100000
Q ss_pred HHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccc----hhhHhhH
Q 013144 293 YILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQ----ASWFSAV 368 (449)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~~~~~~~ 368 (449)
....++++.+....++.++|+|.+..+++...+++...+.+....-..+++.+. ++.+ .|.....
T Consensus 259 ----------~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ysafmG~~~~~ 327 (491)
T PF03219_consen 259 ----------KKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYP-DPNDYSAFMGKFSSW 327 (491)
T ss_pred ----------cccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHHHHHHHHHHHH
Confidence 011233444556788889999999999998888888888777666666666443 3322 3445556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 013144 369 PWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 369 ~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.++..++..++++.+.+|+|-+
T Consensus 328 tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 328 TGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhhHH
Confidence 6666777778888999988877
No 236
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.61 E-value=2.3e-06 Score=69.08 Aligned_cols=109 Identities=14% Similarity=0.168 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhc
Q 013144 138 IVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARW 217 (449)
Q Consensus 138 ~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~ 217 (449)
.-.++......+++++.+.+.+++|.|+.++++.+.+.+-.... +. ++.+.++.+-++.|++.+..++....++.+.
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~--~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FY--PNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hh--hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 34455666677777888899999999999999999998766554 44 7889999999999999999999999999999
Q ss_pred cCcchhhHHHHHHHHhhhhhhHhHHHHHHHHH
Q 013144 218 FPQTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (449)
Q Consensus 218 ~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~ 249 (449)
.++++|++..+++......+.++|.++.-.+.
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988888887765553
No 237
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.60 E-value=2.7e-07 Score=88.99 Aligned_cols=176 Identities=13% Similarity=0.059 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHHHhHhhhhhhhhhh-hhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCC---------chHHH
Q 013144 99 KVVSMLALALALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG---------KIIMA 168 (449)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr---------r~~l~ 168 (449)
..+..+++..+........+...+|.. .+-+|.+..+.|++.++..+...+..+++|.++||.-+ |-.-.
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 345566666676666666766667775 45689999999999999999999999999999998855 22334
Q ss_pred HHHHHHHHHHHHhhhccchhH-HHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHH
Q 013144 169 WGVALWSLATFLTPWAADTSL-LALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPI 247 (449)
Q Consensus 169 ~~~~~~~i~~~~~~~~~~~~~-~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~ 247 (449)
++....+++.+..++..+.+. ..+.+.-+..++ .|...+..+.-..|.. +++-+..+|+.+....+..+++|.+.+.
T Consensus 338 i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~-~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~ 415 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGL-SGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGI 415 (466)
T ss_pred HHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHH-cccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheee
Confidence 444455555555555532122 222222222222 2222333333344445 5888999999999999999999999999
Q ss_pred HHh---hhCchHHHHHHHHHHHHHHHHHHHhc
Q 013144 248 LMS---QAGIFGPFVIFGLSGFLWVLVWLSAT 276 (449)
Q Consensus 248 l~~---~~gwr~~f~~~~~~~~~~~~~~~~~~ 276 (449)
+.. ...||++|++.+++.++..+++.++-
T Consensus 416 ~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 416 IVTDNTREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred EeCCCCHHHHHHHHHHHHHHHHHhchheeEee
Confidence 984 34799999999988888776655554
No 238
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.57 E-value=1.7e-07 Score=86.68 Aligned_cols=182 Identities=15% Similarity=0.044 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHH--------HHHHHHH-HHHHhhccchhhhhhcCCchHHHH
Q 013144 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGI--------VQSSFLW-GYLVSPIAGGTLVDYYGGKIIMAW 169 (449)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~--------~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~ 169 (449)
..+...+...|+.-...+..+.....+.+.++..+..... ...+... ++..+-.+...++|+.|||+..+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 5566667777777666777777777787777664443322 2222233 333477788899999999999999
Q ss_pred HHHHHHHHHHHhhhccch--hHHHHHHHHHHHhhhh-hhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHH
Q 013144 170 GVALWSLATFLTPWAADT--SLLALLAMRAVVGLAE-GVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSP 246 (449)
Q Consensus 170 ~~~~~~i~~~~~~~~~~~--~~~~l~~~r~l~G~g~-g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~ 246 (449)
+.+++.+..+..+....+ +-..+++...+..+.. -+.......+-+|.+|.+-|+.+-|+..+..-.|.++|...-.
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 999999999988877221 1222222222222221 1223445566789999999999999999999999999999999
Q ss_pred HHHh-----hhCchHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 013144 247 ILMS-----QAGIFGPFVIFGLSGFLWVLVWLSATSSTPD 281 (449)
Q Consensus 247 ~l~~-----~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~ 281 (449)
.+.+ ..|.|++|++.+...++..+..+++ ||+..
T Consensus 464 ~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk~ 502 (538)
T KOG0252|consen 464 YLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI-PETKG 502 (538)
T ss_pred HhhhccCCccccchHHHHHHHHHHHHhHheeEEe-ecccc
Confidence 9998 7899999999999888877766655 45443
No 239
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.57 E-value=1.6e-06 Score=74.56 Aligned_cols=141 Identities=15% Similarity=0.088 Sum_probs=95.3
Q ss_pred HhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHH
Q 013144 115 RVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLA 194 (449)
Q Consensus 115 ~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~ 194 (449)
....+|..-.+-+.++....++|.+........++...+.|-++|+.|||+.-+.-++.+.++++- -.+ +.|-.+++
T Consensus 53 DWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT-KhS--pqYkVLmV 129 (454)
T KOG4332|consen 53 DWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT-KHS--PQYKVLMV 129 (454)
T ss_pred hhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh-hcC--CceEEEee
Confidence 334556666677888888999999988888888999999999999999999655555555444432 234 88999999
Q ss_pred HHHHHhhhhhhhhhHHHHHH-hhccCcchhhHHHHHHH--------HhhhhhhHhHHHHHHHHHhhhC--chHHHHH
Q 013144 195 MRAVVGLAEGVALPAMNNMV-ARWFPQTERARAVAIAM--------GGFTSGNAIGLVLSPILMSQAG--IFGPFVI 260 (449)
Q Consensus 195 ~r~l~G~g~g~~~~~~~~~i-~~~~~~~~rg~~~~~~~--------~~~~~G~~~g~~l~~~l~~~~g--wr~~f~~ 260 (449)
+|++-|+..+..+.+--++. .|.- ++|+.-.-+.. .+..+-.+++.+.+..+.+.++ --.+|-.
T Consensus 130 GR~LGGiaTsLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdA 204 (454)
T KOG4332|consen 130 GRVLGGIATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDA 204 (454)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHH
Confidence 99999999998888777654 4443 23332222221 2233344555556666666554 3344433
No 240
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.54 E-value=2.6e-07 Score=65.31 Aligned_cols=80 Identities=20% Similarity=0.196 Sum_probs=73.6
Q ss_pred HHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHH
Q 013144 111 CNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLL 190 (449)
Q Consensus 111 ~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~ 190 (449)
.+..+..+++.+|.+++|.++|.++.||+.++..+|+.+|++...++.++..+++.+..+.+...+..+.+++. ++.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~--~~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT--HSFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH--hchH
Confidence 35677889999999999999999999999999999999999999999999888999999999999999999998 7766
Q ss_pred HH
Q 013144 191 AL 192 (449)
Q Consensus 191 ~l 192 (449)
.+
T Consensus 82 ~w 83 (85)
T PF06779_consen 82 LW 83 (85)
T ss_pred HH
Confidence 54
No 241
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.49 E-value=6.7e-06 Score=80.93 Aligned_cols=149 Identities=13% Similarity=0.090 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhhhhhh-cCCCc---hhhHHHHHHHHHHHHHhhccchhhhhhcCCc-hHHHHHHHHH
Q 013144 100 VVSMLALALALCNADRVVMSVAIVPLSLA-HGWSR---SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK-IIMAWGVALW 174 (449)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~---~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr-~~l~~~~~~~ 174 (449)
.+.+..+..++.++.........|..... ++-+. ...++....+.++..+++.+.|.+.-+++|- +.++++.+++
T Consensus 311 ~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ 390 (599)
T PF06609_consen 311 GFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLM 390 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHH
Confidence 34444455555555555666666665443 34333 3578888899999999999999999988864 4556777777
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHH
Q 013144 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (449)
Q Consensus 175 ~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l 248 (449)
.++..+++....+|....+..-++.|+|.|...........-..|+++-|.+.++..+...+|+.+|..+...+
T Consensus 391 ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 391 TAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred HHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 76655555443356666677788999999998888888888888999999999999999999999988776444
No 242
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.44 E-value=2.4e-06 Score=76.15 Aligned_cols=281 Identities=15% Similarity=0.058 Sum_probs=177.7
Q ss_pred hcCCCchhhH-HHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhh
Q 013144 128 AHGWSRSFSG-IVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVA 206 (449)
Q Consensus 128 ~~~~~~~~~g-~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~ 206 (449)
+.++++.++. =+.-...-.+.+.-++.=.+.|..--|+++++-.+.......+.-+. ++.+.+=+.-++.|...+.
T Consensus 35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g--~sV~~mQvlE~FyG~~tAa- 111 (433)
T KOG3810|consen 35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFG--PSVKAMQVLEFFYGPATAA- 111 (433)
T ss_pred CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhc--CCchheeeehhhcChHHHH-
Confidence 4456655543 11222233334444445568999999999888888777788888888 9999999999999998765
Q ss_pred hhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC--chHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 013144 207 LPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG--IFGPFVIFGLSGFLWVLVWLSATSSTPDRHP 284 (449)
Q Consensus 207 ~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (449)
..+-++++-+..+++++.++.+..-+..-.|..+|..++..+..... +...-++......+..+ +.++.|..++..-
T Consensus 112 EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~-~A~fLP~v~rSl~ 190 (433)
T KOG3810|consen 112 EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVL-LALFLPRVKRSLY 190 (433)
T ss_pred HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHH-HHhhCCCCchhhh
Confidence 67788889888999999999999999999999999999988876433 33333333222222223 3334444442211
Q ss_pred CCCHHHHHHHHHhccCccccCCCCCCCC-----------CchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013144 285 QISKYELEYILREKQKPLLMGNKHKPAT-----------VIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNF 353 (449)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (449)
...++++.. ..+. ++...+.+ .+..+....++|++....+...+...+++....+......+
T Consensus 191 f~~~~~~~~-v~~~------e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~ 263 (433)
T KOG3810|consen 191 FHRLEDKIS-VGDL------EEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKE 263 (433)
T ss_pred hhcccccce-eccc------hhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHh
Confidence 111111000 0000 00111111 12244566688999999999999888998888888777776
Q ss_pred hhCCcccch----hhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhcccchhHHHHHH
Q 013144 354 VYHIDLRQA----SWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWL 429 (449)
Q Consensus 354 ~~g~s~~~~----~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (449)
.. +..+ |..=++..+.++++.+..|.+.-.+.|. +..++.++.+..+..++.+....+.|...+..
T Consensus 264 ~~---~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~-------g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~y 333 (433)
T KOG3810|consen 264 VA---PNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRW-------GDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGY 333 (433)
T ss_pred hC---CCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchh-------hHHHHHHHHHHhhhhhhhhhcccceehhhhhH
Confidence 52 2222 3344455566677777777775555444 35677777777777777777777766444333
No 243
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.44 E-value=7.5e-06 Score=81.28 Aligned_cols=177 Identities=16% Similarity=0.092 Sum_probs=114.4
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhh
Q 013144 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (449)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 183 (449)
+.+..+.............+.+.+..|.+... .+...+..+...++..+...+.||+|||+.++.+...+.++.++++.
T Consensus 300 ~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~ 378 (513)
T KOG0254|consen 300 LLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAV 378 (513)
T ss_pred HHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHH
Confidence 33333333344445555667777777766443 55555666667777777799999999999999999999999988765
Q ss_pred ccch-----------hHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh
Q 013144 184 AADT-----------SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (449)
Q Consensus 184 ~~~~-----------~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 252 (449)
.... ....+...-+.......+..+....+.+|.+|.+-|+++.++......+...+-......+.+..
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~ 458 (513)
T KOG0254|consen 379 VGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEAL 458 (513)
T ss_pred HHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5100 11222222222222233335566678899999999999999988777766655544444444444
Q ss_pred CchHHHHHHHHHHHHHHH-HHHHhcCCCCC
Q 013144 253 GIFGPFVIFGLSGFLWVL-VWLSATSSTPD 281 (449)
Q Consensus 253 gwr~~f~~~~~~~~~~~~-~~~~~~~~~~~ 281 (449)
++...|...+..+.+... ..++..||+..
T Consensus 459 ~~~~~f~~f~~~~~~~~~~fv~~~~pETkg 488 (513)
T KOG0254|consen 459 GIGGTFGYFGGICLLSLIIFVFFFVPETKG 488 (513)
T ss_pred cccchHHHHHHHHHHHHHHHheEEcccCCC
Confidence 456677776666666666 56666666654
No 244
>PTZ00207 hypothetical protein; Provisional
Probab=98.40 E-value=9.9e-06 Score=80.15 Aligned_cols=173 Identities=12% Similarity=0.010 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhhhhhhc-CC-CchhhHH-HHHHHHHHHHHhhccchhhhhh---------cCCchHH
Q 013144 100 VVSMLALALALCNADRVVMSVAIVPLSLAH-GW-SRSFSGI-VQSSFLWGYLVSPIAGGTLVDY---------YGGKIIM 167 (449)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~-~~~~~g~-~~s~~~~~~~~~~~~~G~l~dr---------~Grr~~l 167 (449)
-+++++...++.......+..-+.++.+.+ |. .+.+... +++++.++..+|.+..|.+... +.|--.+
T Consensus 354 d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l 433 (591)
T PTZ00207 354 RLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIAL 433 (591)
T ss_pred hHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHH
Confidence 344555555555555555556677788888 65 2232233 7899999999999999988721 2222234
Q ss_pred HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhH-HHHHH
Q 013144 168 AWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIG-LVLSP 246 (449)
Q Consensus 168 ~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g-~~l~~ 246 (449)
.+..+ +.++.++.++. -....+++.-++.|++.|..++.....++|+|. |+-|+-..+......+|..+- ..+.|
T Consensus 434 ~~~~~-~~~~~lll~~~--~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G 509 (591)
T PTZ00207 434 FIPSV-CIITMLTLFLT--LPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYG 509 (591)
T ss_pred HHHHH-HHHHHHHHHHH--CCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHH
Confidence 44444 67777776666 333789999999999999999999999999998 999999999999999998776 56777
Q ss_pred HHHhhh----------C---chHHHHHHHHHHHHHHHHHHHhc
Q 013144 247 ILMSQA----------G---IFGPFVIFGLSGFLWVLVWLSAT 276 (449)
Q Consensus 247 ~l~~~~----------g---wr~~f~~~~~~~~~~~~~~~~~~ 276 (449)
.+.+.- | +|.+|++.+.+++...+....+.
T Consensus 510 ~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 510 EWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVH 552 (591)
T ss_pred HHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhee
Confidence 776532 2 78899998888887777655543
No 245
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.40 E-value=2.7e-05 Score=75.35 Aligned_cols=142 Identities=12% Similarity=0.001 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHhhccchhhhhhcCC-chHHHHHHHHHHHHHHHhhhccchh---------------------HHHHHHH
Q 013144 138 IVQSSFLWGYLVSPIAGGTLVDYYGG-KIIMAWGVALWSLATFLTPWAADTS---------------------LLALLAM 195 (449)
Q Consensus 138 ~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~~i~~~~~~~~~~~~---------------------~~~l~~~ 195 (449)
|....+.+...+.+++.-++.+|+|+ |++..++.++.+++.....+. ++ .+..++.
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 386 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLV--TYVAKNSRYYDGDGESLPPPTGIKASALIV 386 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHH--HhhhhccccccccccccCcchhhHHHHHHH
Confidence 44455666666777788889999995 777799988888887777655 32 3777888
Q ss_pred HHHHhhhhhhhhhHHHHHHhhccCc--chhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC--chHHHHHHHHHHHHHHHH
Q 013144 196 RAVVGLAEGVALPAMNNMVARWFPQ--TERARAVAIAMGGFTSGNAIGLVLSPILMSQAG--IFGPFVIFGLSGFLWVLV 271 (449)
Q Consensus 196 r~l~G~g~g~~~~~~~~~i~~~~~~--~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g--wr~~f~~~~~~~~~~~~~ 271 (449)
-.+.|+..+.....-++++++..++ ++.|..+|+++.+..+.+++..+..|.+.+.+| -.+.+.+.++..++..+.
T Consensus 387 ~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~ 466 (477)
T TIGR01301 387 FAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLL 466 (477)
T ss_pred HHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHH
Confidence 8999999999999999999999984 556999999999999999999988888766655 566788888888888888
Q ss_pred HHHhcCCCCC
Q 013144 272 WLSATSSTPD 281 (449)
Q Consensus 272 ~~~~~~~~~~ 281 (449)
.++..|+++.
T Consensus 467 ~~~~~~~~~~ 476 (477)
T TIGR01301 467 ALILLPRPRV 476 (477)
T ss_pred HHHhCCCCCC
Confidence 8888877654
No 246
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.40 E-value=2e-05 Score=71.38 Aligned_cols=263 Identities=13% Similarity=0.029 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhh-----hcCCchHHHH-HH
Q 013144 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD-----YYGGKIIMAW-GV 171 (449)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~d-----r~Grr~~l~~-~~ 171 (449)
...+..+.+.+.+.+...+... .+|.+.+.-|.|-++.+...-++. -..--++|.++.| |+||||.-++ +.
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvvp~q 106 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQ 106 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceeeehH
Confidence 3455666677777777777777 889988877888777665543221 1234567888999 9999984332 22
Q ss_pred HHHHHHHHHhhhc---------cchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHH
Q 013144 172 ALWSLATFLTPWA---------ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGL 242 (449)
Q Consensus 172 ~~~~i~~~~~~~~---------~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~ 242 (449)
.+.+....+.+.- ..++...+....++.-+..+.-..+.-.+.-.+..+++-|.+......+.+.|.++|.
T Consensus 107 ~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~ 186 (510)
T KOG3574|consen 107 YLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGN 186 (510)
T ss_pred HHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhc
Confidence 2222222222211 1134444545556667777777777777777888888887777776666666666665
Q ss_pred HHHHHHHh-------hhCch---------HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccCccccCC
Q 013144 243 VLSPILMS-------QAGIF---------GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGN 306 (449)
Q Consensus 243 ~l~~~l~~-------~~gwr---------~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (449)
.+--.+-. ..+|. ..+++.+.+.++...+..+..+|+++...+ + .
T Consensus 187 ~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~---e----------------~ 247 (510)
T KOG3574|consen 187 VVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDE---E----------------L 247 (510)
T ss_pred ceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhh---h----------------h
Confidence 44322221 11222 233444555555555555554444432100 0 0
Q ss_pred CCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHH
Q 013144 307 KHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM 386 (449)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 386 (449)
+..-+....-++++++-|.+...+......=.++.+-....+.-+.| .|++..+.++...+. +..+++.++...|
T Consensus 248 ~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~----~plqI~l~~~~gk 322 (510)
T KOG3574|consen 248 ELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPL----VPLQIALPLYIGK 322 (510)
T ss_pred hcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeeh----hhHHHhhhhhhee
Confidence 00111112245677788888888888777778888888888888888 499988877766443 3344444444444
Q ss_pred H
Q 013144 387 L 387 (449)
Q Consensus 387 ~ 387 (449)
+
T Consensus 323 ~ 323 (510)
T KOG3574|consen 323 W 323 (510)
T ss_pred e
Confidence 3
No 247
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.31 E-value=2.9e-06 Score=59.60 Aligned_cols=71 Identities=18% Similarity=0.108 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHH
Q 013144 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (449)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (449)
+-..+++.+...+...|.++...++.|+|+.++|.+.++..+...++++++|.++||+++++.++....+.
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34455666666677778888888899999999999999999999999999999999999999877766554
No 248
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.27 E-value=0.0042 Score=58.91 Aligned_cols=279 Identities=10% Similarity=-0.020 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcC---CCchhhHHHHHHHHH-HHHHhhccchhhhhhcCCchHHHHHHH
Q 013144 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHG---WSRSFSGIVQSSFLW-GYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (449)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~~ 172 (449)
.+..+..+.+..++..+..... -.+.+.+. ..+..+.++-+...+ +..+..++.+++.+++.+.+++-+.+.
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~l----R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~ 100 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLL----RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILG 100 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 4445555555555555554443 34444443 356677888888888 777888899999999999999988888
Q ss_pred HHHHHHHHhhhcc-------chh-----------------------HHHHHHHHHHHhhhhhhhhh-HHHHHHhhccCcc
Q 013144 173 LWSLATFLTPWAA-------DTS-----------------------LLALLAMRAVVGLAEGVALP-AMNNMVARWFPQT 221 (449)
Q Consensus 173 ~~~i~~~~~~~~~-------~~~-----------------------~~~l~~~r~l~G~g~g~~~~-~~~~~i~~~~~~~ 221 (449)
.+....+++++.- +++ .|...+..++.-+-...... .-.....|.+..+
T Consensus 101 ~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~ 180 (509)
T COG3202 101 FFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIE 180 (509)
T ss_pred HHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 8888877777641 011 13333333333333333333 5567788999999
Q ss_pred hhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh-C---------chHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHH
Q 013144 222 ERARAVAIAMGGFTSGNAIGLVLSPILMSQA-G---------IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYEL 291 (449)
Q Consensus 222 ~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~-g---------wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (449)
|-.|..++++.+.+++..++..+..++..+. . .+..+.+.+..+++.+.+..+.-+...+++.......+
T Consensus 181 eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~ 260 (509)
T COG3202 181 EAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKK 260 (509)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhc
Confidence 9999999999999999999998888886521 1 23334444444444444444443333332221100000
Q ss_pred HHHHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccch---hhHhhH
Q 013144 292 EYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQA---SWFSAV 368 (449)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~---~~~~~~ 368 (449)
.++.++.+......++.+.|+|.++.+++...+++.+.+.+....-.-.++.+....... |.+...
T Consensus 261 -----------kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~ 329 (509)
T COG3202 261 -----------KKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIW 329 (509)
T ss_pred -----------ccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHH
Confidence 001222334455678888899999999988888888877776444343444333332233 333444
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHh
Q 013144 369 PWSV-MAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 369 ~~~~-~~~~~~~~g~l~dr~g~~ 390 (449)
.++. .++...+++.+.+|.|..
T Consensus 330 tgvv~~v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 330 TGVVSLVVFLFPGSNLIRRVGWF 352 (509)
T ss_pred HHHHHHHHHHhhhHHHHHHhhHH
Confidence 4444 344556778888888765
No 249
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.18 E-value=3.8e-06 Score=81.41 Aligned_cols=160 Identities=13% Similarity=0.085 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhhhhhh-cCCCchhhHHHHHHHHHHHHHhhccchhhhhh----cCCchHHHHHHHHH
Q 013144 100 VVSMLALALALCNADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGKIIMAWGVALW 174 (449)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~~l~~~~~~~ 174 (449)
.+...++..++.....+.+...+|.+.++ .|.+..+.+.+.+.+.++.+++.+++|+++|| ..+|......+.++
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 34556666666777777777788887777 56899999999999999999999999999999 67777766666665
Q ss_pred HHHH-HHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchh-hHHHHHHHHhhhhhhHhHH-HHHHHHHhh
Q 013144 175 SLAT-FLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTER-ARAVAIAMGGFTSGNAIGL-VLSPILMSQ 251 (449)
Q Consensus 175 ~i~~-~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r-g~~~~~~~~~~~~G~~~g~-~l~~~l~~~ 251 (449)
.+.. +..... .+......+-+..+.+.+...+......++...++.| -...+....+.+.+.++++ ..-+.....
T Consensus 354 ~~~g~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~ 431 (495)
T KOG2533|consen 354 AIIGAISLLAA--AVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPR 431 (495)
T ss_pred HHHHHHHHHhh--ccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcc
Confidence 5554 433333 3344444444444455556667777777777755443 3334444444444444433 333444455
Q ss_pred hCchHHHHHH
Q 013144 252 AGIFGPFVIF 261 (449)
Q Consensus 252 ~gwr~~f~~~ 261 (449)
++|-+.|+..
T Consensus 432 y~~~~~f~~~ 441 (495)
T KOG2533|consen 432 YGWGAVFYML 441 (495)
T ss_pred hhhhhHHHHH
Confidence 7888888543
No 250
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.14 E-value=3e-05 Score=70.46 Aligned_cols=123 Identities=20% Similarity=0.203 Sum_probs=111.6
Q ss_pred hhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcC--CchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhh
Q 013144 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG--GKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAE 203 (449)
Q Consensus 126 ~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G--rr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~ 203 (449)
.+.+|.++.|.|-+.+...+...+.+....+..||.. -+..+..++.+..-..++.+.+ +....++++-.+-.+..
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~--~~~~~l~~~s~l~sf~~ 366 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA--RTPVVLYLGSTLKSFST 366 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc--ccchhhhHHHHHHHHHH
Confidence 3779999999999999999999999999999999998 7778888887777777777788 88889999999999999
Q ss_pred hhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh
Q 013144 204 GVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (449)
Q Consensus 204 g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~ 250 (449)
+...+....++....|+++||..+|+..+...++-++||+++|.+..
T Consensus 367 A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 367 ASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 99999999999999999999999999999999999999999988754
No 251
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.13 E-value=0.00025 Score=70.80 Aligned_cols=160 Identities=15% Similarity=0.105 Sum_probs=110.9
Q ss_pred hhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhH-HHHHHHHHHH
Q 013144 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSL-LALLAMRAVV 199 (449)
Q Consensus 121 ~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~-~~l~~~r~l~ 199 (449)
.++.....+|.+......+... .........+...|++|||..+..+..+..++.++.++...... +...+...+.
T Consensus 340 gl~~~~~~lg~~~~~~~~~~~~---~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (521)
T KOG0255|consen 340 GLSLNVSGLGGNIYLNFTLSGL---VELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLG 416 (521)
T ss_pred hhhhhhhhcCchHHHHHHHHHH---HHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHH
Confidence 3444445566544333333332 44444445589999999999999999999999999888732222 2455556666
Q ss_pred hhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhcCCC
Q 013144 200 GLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSST 279 (449)
Q Consensus 200 G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 279 (449)
.++.+..+.....+.+|.+|...|..+.+..+....+|.+++|.+...... ......+.+.+..+.+..++..++.||+
T Consensus 417 ~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet 495 (521)
T KOG0255|consen 417 KFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPET 495 (521)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCccc
Confidence 666666777779999999999999999999999999999999998766544 2222233334555566666665677777
Q ss_pred CCCCC
Q 013144 280 PDRHP 284 (449)
Q Consensus 280 ~~~~~ 284 (449)
.....
T Consensus 496 ~~~~l 500 (521)
T KOG0255|consen 496 KGKPL 500 (521)
T ss_pred CCCCC
Confidence 65544
No 252
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.12 E-value=0.00017 Score=70.26 Aligned_cols=134 Identities=16% Similarity=0.067 Sum_probs=98.9
Q ss_pred hhHHHHHHHHHHHHHhhccchhhhhhcCC--ch-----HHHHHHHHHHHHHHHhhhc----c---chhHHHHHHHHHHHh
Q 013144 135 FSGIVQSSFLWGYLVSPIAGGTLVDYYGG--KI-----IMAWGVALWSLATFLTPWA----A---DTSLLALLAMRAVVG 200 (449)
Q Consensus 135 ~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr--r~-----~l~~~~~~~~i~~~~~~~~----~---~~~~~~l~~~r~l~G 200 (449)
..+|..++..+...+.+|+.+++=.|.+| |. =+.+|+++.+++.+...++ . ..+.+++++..++++
T Consensus 309 p~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t 388 (493)
T PRK15462 309 PTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMG 388 (493)
T ss_pred CHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 46788899999888888888888677633 21 2778888888887666432 1 136788999999999
Q ss_pred hhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhh-hhhhHhHHHHHHHHHhh------------hCchHHHHHHHHHHHH
Q 013144 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGF-TSGNAIGLVLSPILMSQ------------AGIFGPFVIFGLSGFL 267 (449)
Q Consensus 201 ~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~-~~G~~~g~~l~~~l~~~------------~gwr~~f~~~~~~~~~ 267 (449)
+|.-...|...+.+++..|++.||+.+|.+.... .+|..++..+++..... ..+...|...+..+++
T Consensus 389 ~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 468 (493)
T PRK15462 389 FAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALA 468 (493)
T ss_pred HHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999996643 57777766666555210 1244566666665554
Q ss_pred H
Q 013144 268 W 268 (449)
Q Consensus 268 ~ 268 (449)
.
T Consensus 469 ~ 469 (493)
T PRK15462 469 C 469 (493)
T ss_pred H
Confidence 4
No 253
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.02 E-value=4.7e-05 Score=53.49 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.+-..+++.+.+...+..++|.|+++ .|+++.++|.+.++..+..+++.++.|+++||.+++
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 44556777788888889999999998 599999999999999999999999999999999988
No 254
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.94 E-value=0.00012 Score=70.65 Aligned_cols=126 Identities=20% Similarity=0.230 Sum_probs=112.3
Q ss_pred hhhhhhhcCCCchhhHHHHHHHHHHHHHhhccch-hhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHh
Q 013144 122 IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGG-TLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (449)
Q Consensus 122 ~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G-~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G 200 (449)
.-.+...++.++.+.+...+...+...+++++.. .+...+|-|++..+|++...+...+.+++ ++.|+++...++.+
T Consensus 265 ~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~--~~~w~~~~~~v~~~ 342 (463)
T KOG2816|consen 265 LLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA--TETWMMFAAGVVVA 342 (463)
T ss_pred EEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh--ccchhhhHHHHHHH
Confidence 4556678999999999888888888888888776 78888999999999999999999999999 99999999998888
Q ss_pred hhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHh
Q 013144 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (449)
Q Consensus 201 ~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~ 250 (449)
+. +...|...+.++.+..++++|+++++.+....+...++|.+-+.+..
T Consensus 343 ~~-~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 343 LA-GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred hh-cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 86 55689999999999999999999999999999999999998877754
No 255
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.92 E-value=5.1e-05 Score=72.05 Aligned_cols=111 Identities=20% Similarity=0.234 Sum_probs=90.8
Q ss_pred hHHHHHHHHHHHHHHHhhhccch-------hHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcc---hhhHHHHHHHHhh
Q 013144 165 IIMAWGVALWSLATFLTPWAADT-------SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQT---ERARAVAIAMGGF 234 (449)
Q Consensus 165 ~~l~~~~~~~~i~~~~~~~~~~~-------~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~---~rg~~~~~~~~~~ 234 (449)
|+++++.+++.+|.++..++..+ +.+.++++-.+.++|.|+.-|...++++|-++++ +|...+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 57888999999998885444111 2467899999999999999999999999999765 5788899999999
Q ss_pred hhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHh
Q 013144 235 TSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (449)
Q Consensus 235 ~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (449)
++|..++..+.+++-++.||.+.|.+.++..++..+..+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999888877766655544
No 256
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.85 E-value=8e-05 Score=70.80 Aligned_cols=84 Identities=17% Similarity=0.128 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHH-HHHHHHHHH
Q 013144 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWG-VALWSLATF 179 (449)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~-~~~~~i~~~ 179 (449)
+..+=+.++..+.....+.|.++.+-+++|+++.+.|.+++.-.+..+++.|++|.++|||-+||.++++ .+......+
T Consensus 13 l~~~k~f~~~~~~~~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~f 92 (618)
T KOG3762|consen 13 LIVAKLFYLFFGARFGSLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATF 92 (618)
T ss_pred hheeeeeeeeeeecccccchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 3344445555666667788888899999999999999999999999999999999999999876655554 555555566
Q ss_pred Hhhhc
Q 013144 180 LTPWA 184 (449)
Q Consensus 180 ~~~~~ 184 (449)
+..+.
T Consensus 93 ll~fv 97 (618)
T KOG3762|consen 93 LLVFV 97 (618)
T ss_pred heeec
Confidence 65555
No 257
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.83 E-value=0.0015 Score=61.39 Aligned_cols=142 Identities=11% Similarity=-0.031 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHH---H
Q 013144 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT---F 179 (449)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~---~ 179 (449)
-+.+.++..+.....+.+.+.. ..++.-...+..+....|.+|..++.--...+ |+-+-+++.+-.++..+.. .
T Consensus 251 PL~lVY~aEY~InqGv~~tl~f-p~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s 327 (402)
T PF02487_consen 251 PLFLVYFAEYFINQGVAPTLLF-PNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQS 327 (402)
T ss_pred HHHHHHHHHHHHHhchHHHhcC-CccCCCHHHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHH
Confidence 3445555555443333322211 12233345677888888888877775433222 3322232222222222222 2
Q ss_pred HhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHH
Q 013144 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (449)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~ 249 (449)
+.-+. ++.|.+++.-+..|+..|..++.....+.|-.|+++|..++|..+.+-++|..++..++-.+-
T Consensus 328 ~~~fi--psi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 328 WYRFI--PSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHh--hHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 23344 789999999999999999999999999999999999999999999999999999988876653
No 258
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.77 E-value=0.0024 Score=60.67 Aligned_cols=284 Identities=11% Similarity=0.012 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhh--cCCCchhhHHHHH---HHHHHHHHhhccchhhhhhcCCchHHHH------H
Q 013144 102 SMLALALALCNADRVVMSVAIVPLSLA--HGWSRSFSGIVQS---SFLWGYLVSPIAGGTLVDYYGGKIIMAW------G 170 (449)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~s---~~~~~~~~~~~~~G~l~dr~Grr~~l~~------~ 170 (449)
.++.+.+++.+...+.....+|.+.++ -+++.+|.|...- -|.+=..=++++=.....|+||||..++ |
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g 82 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSG 82 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHH
Confidence 345666777776666655667887777 5777777765432 1222222222222344448999985443 3
Q ss_pred HHHHHHHHHH----------hhhcc--c---h--hHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHh
Q 013144 171 VALWSLATFL----------TPWAA--D---T--SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGG 233 (449)
Q Consensus 171 ~~~~~i~~~~----------~~~~~--~---~--~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~ 233 (449)
..+..++.-. -.... . + +...+....++.=+-.+.-..+.-.+.-.+..+++++.+..-...+
T Consensus 83 ~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG 162 (544)
T PF13000_consen 83 ILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVG 162 (544)
T ss_pred HHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhH
Confidence 3222222222 00000 0 0 1112223332333333444444555555566778887777766666
Q ss_pred hhhhhHhHHHHHHHHHhh-h---Cch------------HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHh
Q 013144 234 FTSGNAIGLVLSPILMSQ-A---GIF------------GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILRE 297 (449)
Q Consensus 234 ~~~G~~~g~~l~~~l~~~-~---gwr------------~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (449)
.+.|..++..+--.+.+. + =+| .-..+.+.+.++..+...++.+|.|......+.+..+.....
T Consensus 163 ~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~ 242 (544)
T PF13000_consen 163 QTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDGK 242 (544)
T ss_pred hhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCcccccccccccc
Confidence 666666665554433221 0 011 112334444445555555666665532211110100000000
Q ss_pred ccC---ccccCC---CCCCCCCc---hhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhH
Q 013144 298 KQK---PLLMGN---KHKPATVI---PPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAV 368 (449)
Q Consensus 298 ~~~---~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~ 368 (449)
.+. +....+ .++....+ ..+.+++|-|.+..+.+..+..-.++.........-+.+ .|++.++.+....+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~li 321 (544)
T PF13000_consen 243 SKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVLI 321 (544)
T ss_pred ccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHHH
Confidence 000 000000 00111112 233456677888888888888777777777777777778 59999887766544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 013144 369 PWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 369 ~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.+...++.|+++.|+-+.
T Consensus 322 ----~~P~qii~~~~~~Kws~g 339 (544)
T PF13000_consen 322 ----DFPFQIILPYYIGKWSAG 339 (544)
T ss_pred ----hhhHHHHHHHHhhhhhcC
Confidence 566667777777776543
No 259
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.66 E-value=0.00081 Score=66.72 Aligned_cols=179 Identities=16% Similarity=0.082 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHHHHHHHhH-hhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhc-CCchHHHHHHHHH
Q 013144 97 RVKVVSMLALALALCNADR-VVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALW 174 (449)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~ 174 (449)
.|.....+.......-+.. +.....+..+.+++|.....+.-..+.+........+..+.++|-| ||-+++.++.++.
T Consensus 35 ~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~ 114 (571)
T KOG1237|consen 35 GWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLIS 114 (571)
T ss_pred hhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4444444433333333332 3346777888889998888888899999999999999999999975 8999999999999
Q ss_pred HHHHHHhhhc-------c-----------ch-----hHHHHHHHHHHHhhhhhhhhhHHHHHHhhccC---cc---hhhH
Q 013144 175 SLATFLTPWA-------A-----------DT-----SLLALLAMRAVVGLAEGVALPAMNNMVARWFP---QT---ERAR 225 (449)
Q Consensus 175 ~i~~~~~~~~-------~-----------~~-----~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~---~~---~rg~ 225 (449)
.+|.++..+. + ++ ....++.+.-+..+|.|+.-+...++-+|-++ ++ .+..
T Consensus 115 ~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~ 194 (571)
T KOG1237|consen 115 LLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPS 194 (571)
T ss_pred HHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCccc
Confidence 9987654333 0 00 13356777778888999999999999999997 32 2347
Q ss_pred HHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHh
Q 013144 226 AVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (449)
Q Consensus 226 ~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 275 (449)
.+.++....++|..++..+..++=++.||.+.|.+..+..++.+++++..
T Consensus 195 fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 195 FFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcC
Confidence 88899999999999999988888778899999999887776665554443
No 260
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.62 E-value=0.0025 Score=60.62 Aligned_cols=142 Identities=16% Similarity=0.080 Sum_probs=108.7
Q ss_pred hhhHHHHHHHHHHHHHhhccchhhhhhcCCc-------hHHHHHHHHHHHHHHHhhhc--------cchhHHHHHHHHHH
Q 013144 134 SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK-------IIMAWGVALWSLATFLTPWA--------ADTSLLALLAMRAV 198 (449)
Q Consensus 134 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr-------~~l~~~~~~~~i~~~~~~~~--------~~~~~~~l~~~r~l 198 (449)
-..+|..+...+..++.+++..++-.+.++| .-+-+++.+.+.+.++.... ...+.++++...++
T Consensus 324 vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l 403 (498)
T COG3104 324 VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVL 403 (498)
T ss_pred cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHH
Confidence 4568899999999999999988888885554 23455556666555544332 12479999999999
Q ss_pred HhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHH------HHhhhCchHHHHHHHHHHHHHHHHH
Q 013144 199 VGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPI------LMSQAGIFGPFVIFGLSGFLWVLVW 272 (449)
Q Consensus 199 ~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~------l~~~~gwr~~f~~~~~~~~~~~~~~ 272 (449)
+++|.=+..|++.+++....|++-.+.+++.+......|..++..+++. ..+...-...|+..+..+++..+..
T Consensus 404 ~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~ 483 (498)
T COG3104 404 QSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILL 483 (498)
T ss_pred HHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998888887773 3344456667777777776666554
Q ss_pred HHh
Q 013144 273 LSA 275 (449)
Q Consensus 273 ~~~ 275 (449)
+..
T Consensus 484 ~~~ 486 (498)
T COG3104 484 LLL 486 (498)
T ss_pred HHh
Confidence 444
No 261
>PRK03612 spermidine synthase; Provisional
Probab=97.58 E-value=0.0054 Score=60.56 Aligned_cols=141 Identities=19% Similarity=0.205 Sum_probs=86.7
Q ss_pred hhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHH---HHHHHhhhc-c-chh-HHHHHHHHHHHh
Q 013144 127 LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS---LATFLTPWA-A-DTS-LLALLAMRAVVG 200 (449)
Q Consensus 127 ~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~---i~~~~~~~~-~-~~~-~~~l~~~r~l~G 200 (449)
.-+|-+..+.+.+.+++.+|.++|+.+.+++.++.-++.. .+-+.+.. ++..+.... . ... ...++..-++.|
T Consensus 43 ~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 121 (521)
T PRK03612 43 YLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIG 121 (521)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468888899999999999999999999887643222221 11111111 111111111 0 011 122344456778
Q ss_pred hhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHH-hhhCchHHHHHHHHHHHHHH
Q 013144 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM-SQAGIFGPFVIFGLSGFLWV 269 (449)
Q Consensus 201 ~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~-~~~gwr~~f~~~~~~~~~~~ 269 (449)
+..|+..|....+..+.. .++-+...|-......+|.++|.++.+++. ..+|-....++.+.+.++..
T Consensus 122 ~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 122 LLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 888888888777776543 234567788899999999999999988865 46775544444444444333
No 262
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.48 E-value=0.03 Score=50.34 Aligned_cols=68 Identities=18% Similarity=0.185 Sum_probs=52.2
Q ss_pred HHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhcc
Q 013144 148 LVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWF 218 (449)
Q Consensus 148 ~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~ 218 (449)
+..+++.+.+..++|-|+++.++...+...-..- +- +.+..++-.-...|+|.+..+..--+|+++..
T Consensus 72 ~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~--pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 72 IDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LE--PRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cc--hhHHhhccHHHhhccccccccccCcceecHHH
Confidence 3444444589999999999999998887654433 22 78999999999999999988877667766655
No 263
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.30 E-value=0.00033 Score=65.43 Aligned_cols=178 Identities=12% Similarity=0.074 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCC-chHHHHHHHHHHHHHH
Q 013144 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KIIMAWGVALWSLATF 179 (449)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~~i~~~ 179 (449)
+.++.+.+.......+.....+......-|.+....|++.....++.++++.+.|.+.||... |.++++......++..
T Consensus 268 F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~ 347 (480)
T KOG2563|consen 268 FIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTL 347 (480)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 333444444444444455555554445556677889999999999999999999999999874 4555555555555532
Q ss_pred H-hhhc-cchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC----
Q 013144 180 L-TPWA-ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG---- 253 (449)
Q Consensus 180 ~-~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g---- 253 (449)
. .-+. .....+.++....+.|++.....|...-+-.|..-|..-+.-.|+.....++=.++-..+-+.+.+..+
T Consensus 348 ~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~ 427 (480)
T KOG2563|consen 348 MLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGN 427 (480)
T ss_pred HHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCC
Confidence 2 1111 012345566677788888888899888888887654544566666665555555555555566655555
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcCC
Q 013144 254 IFGPFVIFGLSGFLWVLVWLSATSS 278 (449)
Q Consensus 254 wr~~f~~~~~~~~~~~~~~~~~~~~ 278 (449)
|...-+.....+++.+++..+..|+
T Consensus 428 ~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 428 TFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred CccchhHhHHHHHHHHHHHhhhhhh
Confidence 3333344444445555555555443
No 264
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.04 E-value=0.0054 Score=58.74 Aligned_cols=70 Identities=14% Similarity=-0.053 Sum_probs=54.3
Q ss_pred HHHHHHHHHHhhCCcccc-hhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhcccch
Q 013144 344 LSWMPIYFNFVYHIDLRQ-ASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSP 422 (449)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (449)
..+...++.+.+|++..+ .|.+...+..+..+..+.+|+++||+|.| .++..+.+.-++..++..+..+.
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K---------~vL~l~~l~Wsl~t~L~~fa~Sl 115 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK---------PVLVLQALSFVCVWLLLLLGTSV 115 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch---------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445666678999999 99999999999999999999999999988 45566666666666666555443
No 265
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.04 E-value=0.0037 Score=60.51 Aligned_cols=145 Identities=14% Similarity=0.101 Sum_probs=109.6
Q ss_pred CCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhc--------cchhHHHHHHHHHHHhhh
Q 013144 131 WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA--------ADTSLLALLAMRAVVGLA 202 (449)
Q Consensus 131 ~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~--------~~~~~~~l~~~r~l~G~g 202 (449)
.++...|.+..+..++..++..+.....-+..-|+++..+.++..+..+.-... +.++.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 888999999999999999999999888888898999988888877766542211 012334444455777777
Q ss_pred hhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCc--------hHHHHHHHHHHHHHHHHHHH
Q 013144 203 EGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI--------FGPFVIFGLSGFLWVLVWLS 274 (449)
Q Consensus 203 ~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw--------r~~f~~~~~~~~~~~~~~~~ 274 (449)
.+..+-....+++|..|+..-|...++..+..++|..++..++..+.+.++. .+..++..+..++.+.+..+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 7777888899999999999999999999999999999999999999887762 23334444445444444434
Q ss_pred h
Q 013144 275 A 275 (449)
Q Consensus 275 ~ 275 (449)
+
T Consensus 412 L 412 (433)
T PF03092_consen 412 L 412 (433)
T ss_pred c
Confidence 4
No 266
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.03 E-value=0.008 Score=52.31 Aligned_cols=101 Identities=17% Similarity=0.207 Sum_probs=59.1
Q ss_pred chhhHHHHHHHHhhhhhhHhHHHHHHHH---Hh--hhCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Q 013144 221 TERARAVAIAMGGFTSGNAIGLVLSPIL---MS--QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYIL 295 (449)
Q Consensus 221 ~~rg~~~~~~~~~~~~G~~~g~~l~~~l---~~--~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (449)
|+|+....+...+.++|.++.-+.--.- .+ .-.|++++.+.+++.++.+++..++-.+-....+. ++++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~~----- 75 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQE----- 75 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-cccc-----
Confidence 5666666777777788877654432111 11 23599999999888877777666664332221111 0110
Q ss_pred HhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHH
Q 013144 296 REKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHS 337 (449)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (449)
.++.+........+.+|++..|...+.+....
T Consensus 76 ----------k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 76 ----------KENSTLSKKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred ----------cccccccccchHHHHHccchHHHHHHHHHHHh
Confidence 01111222357789999999998887766543
No 267
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.01 E-value=0.0091 Score=57.10 Aligned_cols=144 Identities=17% Similarity=0.074 Sum_probs=102.8
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhc
Q 013144 105 ALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (449)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~ 184 (449)
.++..+-++..-.++..+......-|+++..+|..-+...+....+.+...++.+|+|..+.=+++.....+...++..+
T Consensus 264 s~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~ 343 (432)
T PF06963_consen 264 SFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVS 343 (432)
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHH
Confidence 33333333333334455555555559999999999999999999999999999999999887777766544443333221
Q ss_pred ---cc-----hhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHH
Q 013144 185 ---AD-----TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (449)
Q Consensus 185 ---~~-----~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l 248 (449)
+. .+...++.+-.+.=+|.=+......-++.|..|+++||...|.-.+..++--.+-..++-.+
T Consensus 344 ~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 344 FWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 11 24555555555666665566788889999999999999999999998888877776665433
No 268
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.85 E-value=0.078 Score=50.93 Aligned_cols=143 Identities=13% Similarity=0.135 Sum_probs=96.6
Q ss_pred HHHHHHHHHhHhhhhhhhhhh---hhhcCCCchh-hHHHHHHHHHHHHHhhccchhhhh---hcCCchHHHHHHHHHHHH
Q 013144 105 ALALALCNADRVVMSVAIVPL---SLAHGWSRSF-SGIVQSSFLWGYLVSPIAGGTLVD---YYGGKIIMAWGVALWSLA 177 (449)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~-~g~~~s~~~~~~~~~~~~~G~l~d---r~Grr~~l~~~~~~~~i~ 177 (449)
....+..+.....+....|.- ....+.+... .+.-.-...++..++..+.+.+.+ ++||++.+.++.++..++
T Consensus 246 ~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~ 325 (461)
T KOG3098|consen 246 FPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIG 325 (461)
T ss_pred HHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHH
Confidence 333344444444444444442 2223333322 233333444555555566666664 589999999999999998
Q ss_pred HHHhhhcc----------------chhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhH
Q 013144 178 TFLTPWAA----------------DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIG 241 (449)
Q Consensus 178 ~~~~~~~~----------------~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g 241 (449)
.++.-... .+++...++.-++.|++.+......+.++++.. +++|..+.++.-.-..++..++
T Consensus 326 ~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 326 FLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVA 404 (461)
T ss_pred HHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHH
Confidence 88765441 135777888899999999999999999999999 6889999999988888888776
Q ss_pred HHHHHHH
Q 013144 242 LVLSPIL 248 (449)
Q Consensus 242 ~~l~~~l 248 (449)
-......
T Consensus 405 ~f~~~~~ 411 (461)
T KOG3098|consen 405 FFFSPYL 411 (461)
T ss_pred hhhhhhh
Confidence 6655443
No 269
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.83 E-value=0.01 Score=42.16 Aligned_cols=77 Identities=17% Similarity=0.205 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHh
Q 013144 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (449)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (449)
..+-+.+...+|...++ .++|..+++++.+...++.++|.+...++.++..++ .++..+++...+.++.+
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~---------~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR---------RLLRAGLLLTVLSTAAM 74 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH---------HHHHHHHHHHHHHHHHH
Confidence 44566777788888877 599999999999999999999999999988875544 45567777777777777
Q ss_pred hcccchh
Q 013144 417 TAAKSPV 423 (449)
Q Consensus 417 ~~~~~~~ 423 (449)
...++.+
T Consensus 75 a~~~~~~ 81 (85)
T PF06779_consen 75 ALTHSFW 81 (85)
T ss_pred HHHhchH
Confidence 7665554
No 270
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.66 E-value=0.13 Score=49.67 Aligned_cols=113 Identities=15% Similarity=0.092 Sum_probs=77.2
Q ss_pred hhHHHHHHHHHHHHHhhccchhhhhhcCCc--hHHHHHH--HHHHHHHHHhhhcc-------chhHHHHHHHHHHHhhhh
Q 013144 135 FSGIVQSSFLWGYLVSPIAGGTLVDYYGGK--IIMAWGV--ALWSLATFLTPWAA-------DTSLLALLAMRAVVGLAE 203 (449)
Q Consensus 135 ~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr--~~l~~~~--~~~~i~~~~~~~~~-------~~~~~~l~~~r~l~G~g~ 203 (449)
..-.....+.++-.+|..+..+.. .-++| ++++.+. +++.-..++|..-+ .++-+..++.-++.|+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 334566778888888887554331 11223 3332222 22333333443221 146666777799999999
Q ss_pred hhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHH
Q 013144 204 GVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (449)
Q Consensus 204 g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l 248 (449)
|-....+..+..+..++++|..+..+...+..+|..+|..++-.+
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998876544
No 271
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.55 E-value=0.011 Score=55.66 Aligned_cols=126 Identities=17% Similarity=0.083 Sum_probs=76.4
Q ss_pred CCCchhhHHHHHHHHHHHHHhhccchhhhhhc----CCchHHHHHHHHHHHHH------HHhhhccchhHHHHHHHHHHH
Q 013144 130 GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY----GGKIIMAWGVALWSLAT------FLTPWAADTSLLALLAMRAVV 199 (449)
Q Consensus 130 ~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~----Grr~~l~~~~~~~~i~~------~~~~~~~~~~~~~l~~~r~l~ 199 (449)
|.+..+.-++..+...+..+|.+.+|.++||+ .+-....+.-+..+.+. +.+......+...+.+.-++.
T Consensus 279 ~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~ 358 (493)
T KOG1330|consen 279 GFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLV 358 (493)
T ss_pred CCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 44555666777888899999999999999993 22122222222222222 111111112333333344455
Q ss_pred hhhhhh-hhhHHHHHHhhccCcchhhHHHHHHHHhhh-hhhHhHHHHHHHHHhh-hCch
Q 013144 200 GLAEGV-ALPAMNNMVARWFPQTERARAVAIAMGGFT-SGNAIGLVLSPILMSQ-AGIF 255 (449)
Q Consensus 200 G~g~g~-~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~-~G~~~g~~l~~~l~~~-~gwr 255 (449)
|.-... .+....-+..|..|+++|..+.++-..... +|.+-+|.+.|.+.++ .||+
T Consensus 359 g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 359 GETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 554432 234455667888999999999999765554 5666677688898886 4676
No 272
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.29 E-value=0.0092 Score=57.36 Aligned_cols=84 Identities=13% Similarity=0.199 Sum_probs=66.9
Q ss_pred HHHHHHHH-HHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHH
Q 013144 189 LLALLAMR-AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (449)
Q Consensus 189 ~~~l~~~r-~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~ 267 (449)
.+.+++.. ++.|.+.-.......++-+|...+++++.+.++++.....+..+||++...+....|.|+...+.+...++
T Consensus 387 ~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~ 466 (488)
T KOG2325|consen 387 LILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLV 466 (488)
T ss_pred hhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHH
Confidence 34445553 46777777777788899999999999999999999999999999999999999999999888776555444
Q ss_pred HHHHH
Q 013144 268 WVLVW 272 (449)
Q Consensus 268 ~~~~~ 272 (449)
...++
T Consensus 467 ~~~l~ 471 (488)
T KOG2325|consen 467 VAALW 471 (488)
T ss_pred HHHHH
Confidence 44433
No 273
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.08 E-value=0.015 Score=59.31 Aligned_cols=69 Identities=7% Similarity=-0.052 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhhc
Q 013144 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA 418 (449)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (449)
.++....-..+++.++++..+.|++.+.+.++.+++.++.+++.||.+||+ .+.++.++.+++.++++.
T Consensus 49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~---------~i~~g~ll~~lg~ll~al 117 (633)
T TIGR00805 49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPI---------VIGIGCAIMGLGSFLLSL 117 (633)
T ss_pred HHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcce---------EEEecHHHHHHHHHHHhC
Confidence 333333333445568999999999999999999999999999999999883 334555555555554433
No 274
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.88 E-value=0.16 Score=47.71 Aligned_cols=120 Identities=13% Similarity=-0.009 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHH----HhhccchhhhhhcCCchHHHHHHHHHHH
Q 013144 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYL----VSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (449)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~----~~~~~~G~l~dr~Grr~~l~~~~~~~~i 176 (449)
..+.++..+.....+..+..+.++..+++-.+.. .-.....+.+... +....-..+.-|.-+| +.........+
T Consensus 20 ~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~-~~~~l~~~~il 97 (406)
T KOG1479|consen 20 YLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTR-VGYLLSLIAIL 97 (406)
T ss_pred HHHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 3344444445556677777778888777643333 3333333444333 4444444445552222 11111111111
Q ss_pred HHHHhhhc-------cchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchh
Q 013144 177 ATFLTPWA-------ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTER 223 (449)
Q Consensus 177 ~~~~~~~~-------~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r 223 (449)
..+.+.++ ....++..++.-.+.|++.|......+...++ +|++.-
T Consensus 98 ~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~yt 150 (406)
T KOG1479|consen 98 FIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYT 150 (406)
T ss_pred HHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHH
Confidence 11222222 12356677777888899988888887777775 555554
No 275
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.76 E-value=0.21 Score=48.32 Aligned_cols=52 Identities=12% Similarity=0.171 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHH
Q 013144 188 SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVL 244 (449)
Q Consensus 188 ~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l 244 (449)
.++..++.-++.|++.+.......++.+ .+|++ .++.+..+.+++++++.++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHH
Confidence 5777778888999999998888888777 56644 3455556666666665544
No 276
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.51 E-value=0.0036 Score=62.08 Aligned_cols=153 Identities=14% Similarity=0.120 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhHhhhhhhhh-hhhhhcCCCchhhHHHHHHHHH-HHHHhhccchhhhhhcC--CchHHHHHHHHH
Q 013144 99 KVVSMLALALALCNADRVVMSVAIV-PLSLAHGWSRSFSGIVQSSFLW-GYLVSPIAGGTLVDYYG--GKIIMAWGVALW 174 (449)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~G--rr~~l~~~~~~~ 174 (449)
..+....++.....+....+....| .+..+|++++++++++..+..+ +.++|.+++|++..|+. .|+.+....+..
T Consensus 305 p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~ 384 (539)
T PF03137_consen 305 PVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVS 384 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHH
Confidence 3445555555555555545555554 4566899999999999876666 66789999999999985 455554444444
Q ss_pred HHHHHHh---hhc-------------c------------------------------------chhHHHHHHHHHHHhhh
Q 013144 175 SLATFLT---PWA-------------A------------------------------------DTSLLALLAMRAVVGLA 202 (449)
Q Consensus 175 ~i~~~~~---~~~-------------~------------------------------------~~~~~~l~~~r~l~G~g 202 (449)
.++.++. .+. . ++.+..+++..++.-+.
T Consensus 385 ~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~ 464 (539)
T PF03137_consen 385 IVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFF 464 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHH
Confidence 4443320 000 0 01234455555555555
Q ss_pred hhhhhhHHHHHHhhccCcchhhHHHHHHHHhhh-hhhHhHHHHHHHHHhh
Q 013144 203 EGVALPAMNNMVARWFPQTERARAVAIAMGGFT-SGNAIGLVLSPILMSQ 251 (449)
Q Consensus 203 ~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~-~G~~~g~~l~~~l~~~ 251 (449)
.+...+.....+-+..|+++|..++|+...... +|.+-||++-|.+.|.
T Consensus 465 ~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 465 TFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp --------------------------------------------------
T ss_pred HHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 555555666666688899999999999876554 6889999999998875
No 277
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.46 E-value=0.45 Score=43.91 Aligned_cols=37 Identities=19% Similarity=0.208 Sum_probs=34.4
Q ss_pred hhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 354 VYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 354 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.+|++..+++.++........+...+.|.+.||+|||
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk 99 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK 99 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Confidence 4799999999999998888999999999999999998
No 278
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=95.21 E-value=0.58 Score=36.55 Aligned_cols=37 Identities=22% Similarity=0.128 Sum_probs=27.4
Q ss_pred HhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHH
Q 013144 232 GGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLW 268 (449)
Q Consensus 232 ~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~ 268 (449)
....++..++.++.+.+.+..|.|..+........+.
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~ 41 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLS 41 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHH
Confidence 3456788888899999999999888877655444433
No 279
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=95.18 E-value=0.1 Score=46.60 Aligned_cols=140 Identities=16% Similarity=0.156 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHh
Q 013144 136 SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVA 215 (449)
Q Consensus 136 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~ 215 (449)
.|.+.-+-.+...+..+.+....||+.--.=..+..++.+.+.++.+++ ++.++-+.+-.+..++.|.-...-.++-+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs--~s~~~sL~GV~~aSissGlGEiTFL~lss 141 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFS--NSVPMSLLGVVFASISSGLGEITFLALSS 141 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEec--cchhHHHhhhhhhhhcCCcceeehhhhhc
Confidence 3445555556666666777778888654444455667777888888898 99999899888988888876655555443
Q ss_pred hccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh--hCchHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 013144 216 RWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ--AGIFGPFVIFGLSGFLWVLVWLSATSSTPDR 282 (449)
Q Consensus 216 ~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~--~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 282 (449)
. +| ...++-++.+.+.++++|..--..+.+. +.-|.+.++...+.++.....++.+++++..
T Consensus 142 ~-Y~----~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~ 205 (409)
T KOG3880|consen 142 R-YP----SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESV 205 (409)
T ss_pred c-CC----CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccc
Confidence 3 33 2446677777888888887766666663 4577888887777777777777776655443
No 280
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=93.74 E-value=0.66 Score=44.02 Aligned_cols=99 Identities=12% Similarity=0.054 Sum_probs=73.7
Q ss_pred CchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHH--HHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhH
Q 013144 132 SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWG--VALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPA 209 (449)
Q Consensus 132 ~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~--~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~ 209 (449)
+..--|.+-++..+..+++++..|++-.++.+..-+.++ .++.+...++++.. +|.|..+++.++.+...-...+.
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t--~~Iwv~Y~~yIif~~~y~fliTi 360 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFT--GNIWVCYAGYIIFRSLYMFLITI 360 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHH
Confidence 334458888899999999999999997777775544433 34444555566677 89999999999888888877888
Q ss_pred HHHHHhhccCcchhhHHHHHHHH
Q 013144 210 MNNMVARWFPQTERARAVAIAMG 232 (449)
Q Consensus 210 ~~~~i~~~~~~~~rg~~~~~~~~ 232 (449)
+..-++.....+.-|..+|+...
T Consensus 361 A~~qIA~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 361 ASFQIAKNLSEERYALVFGINTF 383 (412)
T ss_pred HHHHHHHhccccceeeeeeeHHH
Confidence 88878877776777777766544
No 281
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=92.54 E-value=0.67 Score=40.94 Aligned_cols=67 Identities=19% Similarity=0.127 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHh
Q 013144 339 GFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (449)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (449)
..|.+..|.|. +++.+|+|..+...+.....++..+ .++.|.+.|+.|.+ ..+.++.+...++...+
T Consensus 17 t~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~---------~~l~iG~~~~~~GY~~~ 83 (250)
T PF06813_consen 17 TTYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPW---------VVLLIGAVLGFVGYGLL 83 (250)
T ss_pred cccchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchH---------HHHHHHHHHHHHHHHHH
Confidence 44555566655 4556899999999988888888876 48889999999988 44455554444444433
No 282
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=92.41 E-value=2.3 Score=41.22 Aligned_cols=66 Identities=9% Similarity=-0.009 Sum_probs=53.5
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchH
Q 013144 191 ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (449)
Q Consensus 191 ~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~ 256 (449)
.+++.-++..+..-..+++..++-+.+.+|.-=|..|.+.++..++|+-.-..+.-.+++.+-++.
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~~ 472 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVAT 472 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhccccc
Confidence 344556778888888889999999999999999999999999999998877777666766655543
No 283
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.40 E-value=2.2 Score=43.61 Aligned_cols=152 Identities=14% Similarity=0.129 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhhh-hhhhcCCCchhhHHHHHHHH-HHHHHhhccchhhhhhcC--CchHHHHHHHHHH
Q 013144 100 VVSMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFL-WGYLVSPIAGGTLVDYYG--GKIIMAWGVALWS 175 (449)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~g~~~s~~~-~~~~~~~~~~G~l~dr~G--rr~~l~~~~~~~~ 175 (449)
++.+..++..+......-+...+|- +.++|+.+.+.+..+.+... -+.++|.+++|++..|+- .|.+..+.++...
T Consensus 393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~ 472 (735)
T KOG3626|consen 393 IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSV 472 (735)
T ss_pred hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHH
Confidence 3444555555555544444455554 56679999999999886544 455788889999999874 4444444444433
Q ss_pred HHHHH---hhh---------------------------------------------------------------------
Q 013144 176 LATFL---TPW--------------------------------------------------------------------- 183 (449)
Q Consensus 176 i~~~~---~~~--------------------------------------------------------------------- 183 (449)
+..+. ..+
T Consensus 473 l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~ 552 (735)
T KOG3626|consen 473 LSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSD 552 (735)
T ss_pred HHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCC
Confidence 33332 100
Q ss_pred ----------cc------------------chhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhh
Q 013144 184 ----------AA------------------DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFT 235 (449)
Q Consensus 184 ----------~~------------------~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~ 235 (449)
.+ +..+..+++.-++.-+..+...+..+.++-+..++++|..++|+..+...
T Consensus 553 ~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~ir 632 (735)
T KOG3626|consen 553 GNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIR 632 (735)
T ss_pred CceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHH
Confidence 00 01123344444444444444456666677788899999999999876655
Q ss_pred -hhhHhHHHHHHHHHhh
Q 013144 236 -SGNAIGLVLSPILMSQ 251 (449)
Q Consensus 236 -~G~~~g~~l~~~l~~~ 251 (449)
+|.+-+|++-|+++|.
T Consensus 633 llg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 633 LLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHhcCCchHhhhhhHhh
Confidence 7999999999999873
No 284
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=92.32 E-value=0.67 Score=47.35 Aligned_cols=100 Identities=10% Similarity=0.056 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHH-HHhCCCchhhHHHHHHHHhHHHHHHHHHhh
Q 013144 339 GFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDML-IQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (449)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (449)
.+|++...+..|+.+.+|++...+..+...+....-+..+++|++.|++ |++ ..+..+.++..++..++.
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~---------~tIl~~~ii~~lG~~lla 72 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKF---------KTILYLSIVYVVGHALLS 72 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH---------HHHHHHHHHHHHHHHHHH
Confidence 4566777888888888899988888888888777888889999999985 555 233333333344443333
Q ss_pred cccch----hHHHHHHHHHHHhhhhccccccccc
Q 013144 418 AAKSP----VMASAWLTLAIGMKSFSHSGFLVNL 447 (449)
Q Consensus 418 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (449)
....+ ........+++.+...+.+++-.+.
T Consensus 73 i~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~v 106 (654)
T TIGR00926 73 FGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCV 106 (654)
T ss_pred hccCcccccchHHHHHHHHHHHHHhhccccccCc
Confidence 32111 1112223455556666666655443
No 285
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=92.30 E-value=1.3 Score=39.88 Aligned_cols=140 Identities=16% Similarity=0.011 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhh-hhhhcCCC-chhhHHHHHHHHHHHHHhhccchhhhhhcCC-ch-----HHHHHHHH
Q 013144 102 SMLALALALCNADRVVMSVAIVP-LSLAHGWS-RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KI-----IMAWGVAL 173 (449)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~-~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~-----~l~~~~~~ 173 (449)
+-++..++..++........+-. -.+.+..+ ++|.-|....|.+|..+..- +-++=+ +. .+-.-.++
T Consensus 254 vPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqvlYQlGVFiSRS-----S~~~~~~p~l~~LailQ~vNl~ 328 (409)
T KOG3880|consen 254 VPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQVLYQLGVFISRS-----SINLFTMPYLWLLAILQFVNLL 328 (409)
T ss_pred HHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhheeeeeeEEEEec-----cceEEechHHHHHHHHHHHHHH
Confidence 33455555555443332222111 12333333 34678888888876544332 222211 11 12222333
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHH
Q 013144 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (449)
Q Consensus 174 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l 248 (449)
+.+...+..+. +++|..++.-+.-|+-.|..++...--+.+-.++++|-.+++.....-++|..++..++-.+
T Consensus 329 ff~~~a~~~ft--psi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 329 FFLLQAWYWFT--PSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHhc--cHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 44444556666 89999999999999998988888887777777889999999999999898888887766444
No 286
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.69 E-value=2.1 Score=40.47 Aligned_cols=112 Identities=16% Similarity=0.065 Sum_probs=79.0
Q ss_pred CchhhHHHHHH-HHHHHHHhhccchhhhhhcCCchHHHHHHH-HHHHHHHH-h------hhccchhHHHHHHHHHHHhhh
Q 013144 132 SRSFSGIVQSS-FLWGYLVSPIAGGTLVDYYGGKIIMAWGVA-LWSLATFL-T------PWAADTSLLALLAMRAVVGLA 202 (449)
Q Consensus 132 ~~~~~g~~~s~-~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~-~~~i~~~~-~------~~~~~~~~~~l~~~r~l~G~g 202 (449)
++...-++... +.+.-.+|.+.+.++-+.= ||+..+..++ ...+-.+. | .+- .+-+++++.-.+.|+.
T Consensus 280 ~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~--~~~~~~~~l~~~lgls 356 (406)
T KOG1479|consen 280 GDWYALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLLFIPLFLLCNYPPLPVVF--ESDGWFIFLMSLLGLS 356 (406)
T ss_pred chhhHHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHHHHHHHHHhccCCCCcee--cCchHHHHHHHHHHhc
Confidence 34445556666 8888888877776666653 4443333222 33333333 1 112 5777888889999999
Q ss_pred hhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHH
Q 013144 203 EGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSP 246 (449)
Q Consensus 203 ~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~ 246 (449)
.|-.......+..+-.|++++-.+-.+.......|...|..++.
T Consensus 357 nGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 357 NGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred cchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999999999999999999988888888888888888877654
No 287
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=91.61 E-value=0.064 Score=49.40 Aligned_cols=110 Identities=15% Similarity=0.034 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHhhccchhhhhh-cCCchHHHHHH--HHHHHHHHHhhhcc--------chhHHHHHHHHHHHhhhhhhh
Q 013144 138 IVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGV--ALWSLATFLTPWAA--------DTSLLALLAMRAVVGLAEGVA 206 (449)
Q Consensus 138 ~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~--~~~~i~~~~~~~~~--------~~~~~~l~~~r~l~G~g~g~~ 206 (449)
.....+.++-.+|..+.++..=+ -.+|++...+. +++.-..++|...+ .+|-+..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 34567888888888877764211 12444443221 12222222231110 145566777889999999999
Q ss_pred hhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHH
Q 013144 207 LPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPI 247 (449)
Q Consensus 207 ~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~ 247 (449)
.+.+..+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888877543
No 288
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=90.10 E-value=0.032 Score=48.31 Aligned_cols=61 Identities=13% Similarity=0.044 Sum_probs=41.9
Q ss_pred HHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhh---------hhhcCCchH
Q 013144 106 LALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTL---------VDYYGGKII 166 (449)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l---------~dr~Grr~~ 166 (449)
.+.+.+-....++-..+-.+.++.|+++.....+.-+..+.-++..++.|.. .||+|||+.
T Consensus 24 vGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 24 VGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred hhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceee
Confidence 3444444444444444445556778888888888888888888888888644 569999874
No 289
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=89.95 E-value=0.3 Score=46.34 Aligned_cols=128 Identities=13% Similarity=0.007 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhh
Q 013144 137 GIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVAR 216 (449)
Q Consensus 137 g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~ 216 (449)
.|-..++.+...+.+....++.+|+|-|+.+..+...+.++..+.+.. ++.+....-+...|+-.+.....-...+++
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~--~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~ 412 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLV--LNTYVVLSHRSTAGILSSPLLTVPYGALAL 412 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhh--hhHHHHHHHHhhcceeecchhcccHHHHHH
Confidence 466667888888999999999999998777777777788888888878 888888888888886666555555555544
Q ss_pred ccCc-----------------------chhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC-chHHHHHHHHHHH
Q 013144 217 WFPQ-----------------------TERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGF 266 (449)
Q Consensus 217 ~~~~-----------------------~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~ 266 (449)
+.-. ..+|...|+.++...+.+++.....|.+.+..| =+.+-+..++.++
T Consensus 413 y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~ 486 (498)
T KOG0637|consen 413 YAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVAL 486 (498)
T ss_pred HHHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHH
Confidence 3211 224677778888888888888887787777665 3444344444433
No 290
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=89.59 E-value=25 Score=35.52 Aligned_cols=30 Identities=17% Similarity=-0.051 Sum_probs=16.4
Q ss_pred cccchhhHhhHHHHHHHHHHHHHHHHHHHH
Q 013144 358 DLRQASWFSAVPWSVMAFTGYLGGLLSDML 387 (449)
Q Consensus 358 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 387 (449)
++...+..+..++++..+--++.+....|+
T Consensus 323 ~~~~g~~~l~~~gLG~~~Plll~~~~~~~~ 352 (571)
T PRK00293 323 DLLLGGLTLYLLALGMGLPLILITTFGNKL 352 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344455566666666655455555555444
No 291
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=89.28 E-value=23 Score=34.71 Aligned_cols=72 Identities=13% Similarity=0.060 Sum_probs=56.4
Q ss_pred HHHHhhhhhhhhhHHHHHHhhccC-cchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHH
Q 013144 196 RAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (449)
Q Consensus 196 r~l~G~g~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~ 267 (449)
-++.|+........--..+.+.+| +++|...+|-++...++..++..++++.+.+.+||.....+.-++.++
T Consensus 273 vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 273 VIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 345666666667777778888886 457899999999998888878888889999999999888776655544
No 292
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=85.54 E-value=28 Score=31.56 Aligned_cols=81 Identities=14% Similarity=0.076 Sum_probs=49.7
Q ss_pred chhHHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhh---cCCchHHHHH
Q 013144 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY---YGGKIIMAWG 170 (449)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr---~Grr~~l~~~ 170 (449)
..++....+++.+++++.-...+..+-.+..+.+.+|.-....++..++...... .+-.++ ||.||.=+++
T Consensus 20 ~~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~~a------~r~~~~~~TfGy~R~eiLa 93 (296)
T COG1230 20 NERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKLA------RRPATKRFTFGYKRLEILA 93 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHHHh------cCCCCCCCCccHhHHHHHH
Confidence 3444555566666666666666677777788888888766666666665544432 233333 7888766666
Q ss_pred HHHHHHHHHH
Q 013144 171 VALWSLATFL 180 (449)
Q Consensus 171 ~~~~~i~~~~ 180 (449)
.++.++..+.
T Consensus 94 a~~nav~Li~ 103 (296)
T COG1230 94 AFLNALLLIV 103 (296)
T ss_pred HHHHHHHHHH
Confidence 5555554443
No 293
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=85.31 E-value=17 Score=36.31 Aligned_cols=71 Identities=8% Similarity=0.200 Sum_probs=34.4
Q ss_pred HHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHH
Q 013144 318 RRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (449)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 389 (449)
.++||.|+- ...+..+...............++.-..-+++..-|.+.....+..++.+.++|+.+-|+-+
T Consensus 252 gDVFR~P~~-~~lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk 322 (521)
T PF02990_consen 252 GDVFRPPKH-PMLLSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYK 322 (521)
T ss_pred HHHhcCcCC-chHHHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 477887762 22222222222222233333333333222455555555555555566666677777666644
No 294
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=85.19 E-value=9.1 Score=34.04 Aligned_cols=135 Identities=13% Similarity=0.075 Sum_probs=83.2
Q ss_pred hHHHHHHHHHHHHHhhccchhhhhhcCCc--hHHHHHHHHHHHHHHHhh----hccc-hhHHHHHHHHHHHhhhhhhhhh
Q 013144 136 SGIVQSSFLWGYLVSPIAGGTLVDYYGGK--IIMAWGVALWSLATFLTP----WAAD-TSLLALLAMRAVVGLAEGVALP 208 (449)
Q Consensus 136 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr--~~l~~~~~~~~i~~~~~~----~~~~-~~~~~l~~~r~l~G~g~g~~~~ 208 (449)
-|.+.+.++++.++|+-+..++..|-..| ..+.+..++..+...+.. .++. .+...=+++..+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 48999999999999999998888876665 345555444444433322 2211 1222224555556667788999
Q ss_pred HHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHH
Q 013144 209 AMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (449)
Q Consensus 209 ~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~ 270 (449)
....+=+++.|++.|...+.++-.-.++=..++-..--.=....+-|..|-++.+...+..+
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASI 425 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHH
Confidence 99999999999999999998876554443333211100000012456777776665554433
No 295
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=84.63 E-value=15 Score=32.48 Aligned_cols=101 Identities=14% Similarity=0.195 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHhhccchhhhhh-cCCchHHH----HHHHHHHHHHHHhhhc-cch--hHHHHHHHHHHHhhhhhhhhh
Q 013144 137 GIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMA----WGVALWSLATFLTPWA-ADT--SLLALLAMRAVVGLAEGVALP 208 (449)
Q Consensus 137 g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~----~~~~~~~i~~~~~~~~-~~~--~~~~l~~~r~l~G~g~g~~~~ 208 (449)
....-++..|..+|.+..|++... +.||+.+. .++++..+..+..+.. ..+ ++..+++.-++.|+..=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 445556777777888888888775 45555333 3344444444432121 112 466788888888887544444
Q ss_pred HHHHHHhhcc--CcchhhHHHHHHHHhhhhhhHh
Q 013144 209 AMNNMVARWF--PQTERARAVAIAMGGFTSGNAI 240 (449)
Q Consensus 209 ~~~~~i~~~~--~~~~rg~~~~~~~~~~~~G~~~ 240 (449)
+...+=-|+= .|++-|..+|+ .+++|.++
T Consensus 224 ViL~lPhEyK~~~pk~ig~~Fg~---iWGfGY~~ 254 (267)
T PF07672_consen 224 VILNLPHEYKGYNPKKIGIQFGL---IWGFGYIF 254 (267)
T ss_pred HHhcChhhhcCCCcceehhHHHH---HHHHHHHH
Confidence 4333333322 33444444444 44555443
No 296
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=84.38 E-value=28 Score=30.56 Aligned_cols=16 Identities=19% Similarity=0.171 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHh
Q 013144 375 FTGYLGGLLSDMLIQR 390 (449)
Q Consensus 375 ~~~~~~g~l~dr~g~~ 390 (449)
+..+-+-+++.|+..|
T Consensus 255 lAVigGk~lAskIS~r 270 (294)
T KOG2881|consen 255 LAVIGGKYLASKISVR 270 (294)
T ss_pred HHHhhhHHHhhhheeE
Confidence 3333444567777766
No 297
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=83.59 E-value=27 Score=29.88 Aligned_cols=41 Identities=20% Similarity=0.267 Sum_probs=24.2
Q ss_pred chhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHH
Q 013144 221 TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFG 262 (449)
Q Consensus 221 ~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~ 262 (449)
+++.+.-.......-++..+|..+++.+.+..+.+ ..++.+
T Consensus 158 ~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~ 198 (209)
T PF06912_consen 158 KDRALRRALRYLLIILSFFIGAILGALLYRRLGFW-ALLLPA 198 (209)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHH
Confidence 33333444455556667777777777777777753 334333
No 298
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=83.21 E-value=39 Score=31.41 Aligned_cols=152 Identities=18% Similarity=0.198 Sum_probs=87.5
Q ss_pred hhhhhhhhhhhhc-CCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHH-------HHHhhhccchh
Q 013144 117 VMSVAIVPLSLAH-GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA-------TFLTPWAADTS 188 (449)
Q Consensus 117 ~~~~~~~~l~~~~-~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~-------~~~~~~~~~~~ 188 (449)
+.-.++..+...+ |-.--|.+.+.+.|.....+|+...-++.|---.-+.+..-.++..++ .+.+++-..++
T Consensus 25 vyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~ 104 (508)
T COG4262 25 VYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPS 104 (508)
T ss_pred HHHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchH
Confidence 3334444555544 556678899999999999999998888777533322222222222221 11222222357
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHH-HhhhCchHHHHHHHHHHHH
Q 013144 189 LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL-MSQAGIFGPFVIFGLSGFL 267 (449)
Q Consensus 189 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l-~~~~gwr~~f~~~~~~~~~ 267 (449)
-+.+++.-++.|.-.|...|..+.++..-. .+-....+.....-.+|...+.++-.++ ....|---.-...+++.++
T Consensus 105 ~~Vly~lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~ 182 (508)
T COG4262 105 RLVLYALTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLA 182 (508)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHH
Confidence 888899999999999999999999888722 1222222333333556666666655554 3344533333334444444
Q ss_pred HHH
Q 013144 268 WVL 270 (449)
Q Consensus 268 ~~~ 270 (449)
..+
T Consensus 183 aAv 185 (508)
T COG4262 183 AAV 185 (508)
T ss_pred HHH
Confidence 443
No 299
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=81.87 E-value=7.5 Score=36.47 Aligned_cols=139 Identities=9% Similarity=-0.055 Sum_probs=85.1
Q ss_pred hhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHH----HHHHHHHHHHhhhc---c------
Q 013144 119 SVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWG----VALWSLATFLTPWA---A------ 185 (449)
Q Consensus 119 ~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~----~~~~~i~~~~~~~~---~------ 185 (449)
..+.+.-.-|.|++..+.+++.-...-..++.+...|.+....-+-.+.+-+ .....+...+.... .
T Consensus 285 da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~ 364 (510)
T KOG3574|consen 285 DALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTF 364 (510)
T ss_pred hhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCce
Confidence 3344555568899999888877444444444444455554422111111111 11111111111111 0
Q ss_pred chhHHH-HHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHH
Q 013144 186 DTSLLA-LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGP 257 (449)
Q Consensus 186 ~~~~~~-l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~ 257 (449)
...+.. ++....+.+...-..+...++..+++.+|.--|..|.+.+...++|.-.-..+...+.+.++|.-+
T Consensus 365 ~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~C 437 (510)
T KOG3574|consen 365 PRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQC 437 (510)
T ss_pred eechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceeec
Confidence 012333 344466777767777888999999999999999999999999999998888888888887777644
No 300
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=79.20 E-value=33 Score=27.88 Aligned_cols=44 Identities=11% Similarity=0.110 Sum_probs=30.4
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhHHHHHHHHHhh
Q 013144 365 FSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (449)
Q Consensus 365 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (449)
-.++......+..++.+.+.+++|.| +.+.++.+...+......
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K---------~sm~lg~~~y~~y~~~~~ 85 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPK---------WSMILGSLGYAIYIASFF 85 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhH---------HHHHHHHHHHHHHHHHHH
Confidence 34455566778888999999999988 566666665555554443
No 301
>PRK11715 inner membrane protein; Provisional
Probab=77.02 E-value=31 Score=33.29 Aligned_cols=12 Identities=17% Similarity=-0.133 Sum_probs=7.1
Q ss_pred CCCCCCCCCcce
Q 013144 1 MSSCSLSPYRPI 12 (449)
Q Consensus 1 ~~~~~~~~~~~~ 12 (449)
|+|+|+||.+..
T Consensus 231 l~S~WphPSF~G 242 (436)
T PRK11715 231 LTSNWPHPSFVG 242 (436)
T ss_pred EEcCCcCCCCCC
Confidence 456666665554
No 302
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=76.66 E-value=72 Score=30.82 Aligned_cols=20 Identities=10% Similarity=-0.187 Sum_probs=10.3
Q ss_pred hhhhhcCCCchhhHHHHHHH
Q 013144 124 PLSLAHGWSRSFSGIVQSSF 143 (449)
Q Consensus 124 ~l~~~~~~~~~~~g~~~s~~ 143 (449)
++.+...+-+-|+.++..+.
T Consensus 316 E~~~~~~iHpiQY~LVGlAl 335 (430)
T PF06123_consen 316 ELLSKLRIHPIQYLLVGLAL 335 (430)
T ss_pred HHHhcCcccHHHHHHHHHHH
Confidence 33344455566666554433
No 303
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=74.75 E-value=93 Score=30.82 Aligned_cols=73 Identities=10% Similarity=0.050 Sum_probs=54.3
Q ss_pred HHHHhhhhhhhhhHHHHHHhhccC-cchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHH
Q 013144 196 RAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLW 268 (449)
Q Consensus 196 r~l~G~g~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~ 268 (449)
-+..|+........--..+.+.+| ++++...+|-++...++-.++-..+++.+...+||+..-.+.-+..++.
T Consensus 289 vi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit 362 (491)
T PF03219_consen 289 VIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILIT 362 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHH
Confidence 345666666666777777778886 4567888888888888777777788899999999999887754444433
No 304
>PRK10263 DNA translocase FtsK; Provisional
Probab=74.74 E-value=39 Score=37.28 Aligned_cols=25 Identities=32% Similarity=0.353 Sum_probs=14.0
Q ss_pred hhhhHhHHHHHHHHHhhhCchHHHH
Q 013144 235 TSGNAIGLVLSPILMSQAGIFGPFV 259 (449)
Q Consensus 235 ~~G~~~g~~l~~~l~~~~gwr~~f~ 259 (449)
..|+++|..++..+...+|.-...+
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~vGa~L 165 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSSGGTI 165 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHHHHHH
Confidence 3466666666666666555444333
No 305
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=74.67 E-value=1.2e+02 Score=31.96 Aligned_cols=35 Identities=14% Similarity=-0.001 Sum_probs=19.3
Q ss_pred HhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHH
Q 013144 232 GGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGF 266 (449)
Q Consensus 232 ~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~ 266 (449)
.+..++.++..+++.++...++|...+++.++++.
T Consensus 108 ~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILAP 142 (810)
T TIGR00844 108 PVMTSGWLVIALFVWILVPGLNFPASLLMGACITA 142 (810)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcC
Confidence 33344555555554445445677777766666553
No 306
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=74.16 E-value=37 Score=31.97 Aligned_cols=166 Identities=11% Similarity=0.070 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCc-hhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHH
Q 013144 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSR-SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (449)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~ 180 (449)
+.+.+++++.-...-.+.......+.+++-+. ...+.-...-.....+..++.|...|+..|+|++...+++.-++..+
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~v 109 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIV 109 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHH
Confidence 34556666666666677777777777766433 33333334445566777888899999999999888777654444333
Q ss_pred h------hhccc----hhHHHHHHHHHHHhhhhhh--hhhHHHHHH--hhcc----CcchhhHHH---HHHHHhhhhhhH
Q 013144 181 T------PWAAD----TSLLALLAMRAVVGLAEGV--ALPAMNNMV--ARWF----PQTERARAV---AIAMGGFTSGNA 239 (449)
Q Consensus 181 ~------~~~~~----~~~~~l~~~r~l~G~g~g~--~~~~~~~~i--~~~~----~~~~rg~~~---~~~~~~~~~G~~ 239 (449)
+ .+... .++..+..+-++.-.-.+. ....+.+++ .||. ..+.+.... +..-..=..-..
T Consensus 110 agglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~ 189 (503)
T KOG2601|consen 110 AGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNL 189 (503)
T ss_pred HHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhc
Confidence 2 22211 2444444444433322221 112222211 2332 233344443 333333444577
Q ss_pred hHHHHHHHHHhhhCchHHHHHHHHHHHH
Q 013144 240 IGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (449)
Q Consensus 240 ~g~~l~~~l~~~~gwr~~f~~~~~~~~~ 267 (449)
+.|.+.|.+.+..+-|..-.+.++.+++
T Consensus 190 Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 190 LAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhhhcccceeechhhhhhhhHHHHHH
Confidence 8999999998888888766655555544
No 307
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=72.80 E-value=21 Score=33.17 Aligned_cols=94 Identities=12% Similarity=0.009 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHH--HHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 013144 137 GIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA--LWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMV 214 (449)
Q Consensus 137 g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~--~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i 214 (449)
|..-++..+..+++.+..|.+--.+.|..-++++.. ..+...++++-. ++.|..+++.++.+.-.....+.+..-+
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t--~~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQT--QHIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcc--cceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 566677778888899999999988887754444443 333334445555 8899988888888877777788888888
Q ss_pred hhccCcchhhHHHHHHHH
Q 013144 215 ARWFPQTERARAVAIAMG 232 (449)
Q Consensus 215 ~~~~~~~~rg~~~~~~~~ 232 (449)
++-...+.-|..+|+...
T Consensus 352 A~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTF 369 (433)
T ss_pred HHhhhhhhheeeeehHHH
Confidence 888877777877777654
No 308
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=71.68 E-value=30 Score=30.74 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHhhCCcc--cchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 338 WGFFVILSWMPIYFNFVYHIDL--RQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
..........+.+..+ .+.+. ...++......+...++.++.|.+.||.|||
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 69 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR 69 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch
Confidence 3333444555666555 34444 3678888888888888889999999999877
No 309
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=68.93 E-value=1.3 Score=40.81 Aligned_cols=40 Identities=23% Similarity=0.307 Sum_probs=0.0
Q ss_pred HHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhH
Q 013144 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIG 241 (449)
Q Consensus 197 ~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g 241 (449)
++.|++.+.......++.+. +|++.. ..+..+.++++++.
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y~----~a~~~Gq~~aGv~~ 44 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKYT----QAVMIGQGLAGVIV 44 (309)
T ss_dssp ---------------------------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHHH----HHHHhhccHHHHHH
Confidence 45677777777777777775 665543 33334444444443
No 310
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=68.90 E-value=29 Score=32.63 Aligned_cols=70 Identities=10% Similarity=0.066 Sum_probs=51.1
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHhCC
Q 013144 323 KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGT 392 (449)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 392 (449)
++....+...+++..++--...+....|+....|-|-..++..-.+-+...++...+.|...|+..|.+.
T Consensus 26 s~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kv 95 (503)
T KOG2601|consen 26 SSTVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKV 95 (503)
T ss_pred cceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHH
Confidence 3445556777788888888888888888888766666666666666666677777788888899888743
No 311
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.60 E-value=15 Score=27.26 Aligned_cols=27 Identities=22% Similarity=0.132 Sum_probs=16.7
Q ss_pred HHHHHHHHHHhhccchhhhhhc-CCchH
Q 013144 140 QSSFLWGYLVSPIAGGTLVDYY-GGKII 166 (449)
Q Consensus 140 ~s~~~~~~~~~~~~~G~l~dr~-Grr~~ 166 (449)
.+.-.++..+.....||+.||| |-++.
T Consensus 48 lssefIsGilVGa~iG~llD~~agTsPw 75 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKFAGTSPW 75 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 3445555556666679999985 44443
No 312
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=68.38 E-value=3.6 Score=36.13 Aligned_cols=63 Identities=8% Similarity=0.082 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHH---------HHHHHHHHhC
Q 013144 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGG---------LLSDMLIQRG 391 (449)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g---------~l~dr~g~~~ 391 (449)
...+..+..-.......+++-.|+++. |.++.....++....+...+..++.| +-.||+|||.
T Consensus 21 ~yGvGHmlNDitAScWFTYlllfltqi-glsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~ 92 (412)
T KOG4830|consen 21 AYGVGHMLNDITASCWFTYLLLFLTQI-GLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRM 92 (412)
T ss_pred eechhHHHhhHHHHHHHHHHHHHHHHh-cCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhccee
Confidence 344455555566666778888888886 99998888777777777777777664 4467999883
No 313
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=63.55 E-value=92 Score=26.39 Aligned_cols=35 Identities=17% Similarity=-0.048 Sum_probs=28.0
Q ss_pred CCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 356 HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 356 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.-|+.+.......++++.++..+..+....+.+++
T Consensus 146 s~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 146 SGSPLYGALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred cCChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 44677778888899999988888888888877665
No 314
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=62.41 E-value=70 Score=28.39 Aligned_cols=36 Identities=6% Similarity=-0.207 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhh----CCcccchhhHhhHHH
Q 013144 335 MHSWGFFVILSWMPIYFNFVY----HIDLRQASWFSAVPW 370 (449)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~----g~s~~~~~~~~~~~~ 370 (449)
......++....=..|+++.- +-+.....++++-+.
T Consensus 189 v~aGvlyGs~fvPv~Yi~~~~~~y~~as~~~ldYvFs~f~ 228 (254)
T PF07857_consen 189 VFAGVLYGSNFVPVIYIQDHPDIYPGASQNGLDYVFSHFS 228 (254)
T ss_pred HHHHHHHhcccchHHHHHhCccccCCCCCcchheeHHHHh
Confidence 334455566655566777753 334444445554443
No 315
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=61.37 E-value=65 Score=29.16 Aligned_cols=37 Identities=16% Similarity=0.131 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhh
Q 013144 168 AWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (449)
Q Consensus 168 ~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 205 (449)
+.+++++++.+++..+.. ++.|.+.+.-++.+++.++
T Consensus 3 ~~~~~~~~~~s~~~~l~~-~~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLF-PYPWLLILVLALLTFFFGM 39 (284)
T ss_pred HHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHH
Confidence 444555545555544441 4555555555666665554
No 316
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=60.95 E-value=1.2e+02 Score=27.45 Aligned_cols=82 Identities=13% Similarity=0.150 Sum_probs=43.6
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh--CchHHHHH--HHHHHHH
Q 013144 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA--GIFGPFVI--FGLSGFL 267 (449)
Q Consensus 192 l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~--gwr~~f~~--~~~~~~~ 267 (449)
--..|.+.|+-.= .+..++++++-.||.+++--..--.....++..++-+++|-.+ +.. |.+..-+. .+++.++
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l-~~~~~~i~~~~i~~~l~~~t~~ 99 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL-NYTPWGIRLIPILISLSIFTLV 99 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH-HhccCCcchhHHHHHHHHHHHH
Confidence 5667888888654 3566899999999865543333333333444445555554444 433 43433333 3334444
Q ss_pred HHHHHHHh
Q 013144 268 WVLVWLSA 275 (449)
Q Consensus 268 ~~~~~~~~ 275 (449)
..++....
T Consensus 100 ~~~~a~~r 107 (287)
T PF07760_consen 100 LSIIAYIR 107 (287)
T ss_pred HHHHHHHh
Confidence 44444443
No 317
>COG3619 Predicted membrane protein [Function unknown]
Probab=60.53 E-value=1.1e+02 Score=26.49 Aligned_cols=122 Identities=9% Similarity=0.102 Sum_probs=55.1
Q ss_pred CchhhHHHHHHHHHHHHHhhccchhhhhhcCC-ch-H-HHHHHHHHHHHHHHhhhcc--chhHHHHHHHHHHHh------
Q 013144 132 SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KI-I-MAWGVALWSLATFLTPWAA--DTSLLALLAMRAVVG------ 200 (449)
Q Consensus 132 ~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~-~-l~~~~~~~~i~~~~~~~~~--~~~~~~l~~~r~l~G------ 200 (449)
.+...........+..+++......+..|..| .. . .....++........++.+ .++....+..-+..|
T Consensus 53 ~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg~Qnasf 132 (226)
T COG3619 53 GDAALAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMGIQNASF 132 (226)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHH
Confidence 35555666777777777775555544444443 12 2 2222222222233333321 134444444444444
Q ss_pred -----hhhhhhhh-----HHHHHHhhccCcc-hhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC
Q 013144 201 -----LAEGVALP-----AMNNMVARWFPQT-ERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (449)
Q Consensus 201 -----~g~g~~~~-----~~~~~i~~~~~~~-~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 253 (449)
.+.+..+. ....-+.+++..| +.-.--...+...-.+.++|.+.++.+...+|
T Consensus 133 ~k~~g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 133 RKVGGAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HHhcCccccchhhhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22221111 1112233444332 22233344445555667777777777666555
No 318
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=59.31 E-value=1.8e+02 Score=28.33 Aligned_cols=43 Identities=7% Similarity=0.136 Sum_probs=30.6
Q ss_pred CcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHHHH
Q 013144 219 PQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGF 266 (449)
Q Consensus 219 ~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~ 266 (449)
.+++.+..+++++++.+.|...-|+..+. +|-|+..+..+++.
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~-----~Gf~p~lillll~~ 60 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGF-----GGLIPILLMLVLAY 60 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhc-----chHHHHHHHHHHHH
Confidence 45677888999999999999888887664 45555555444433
No 319
>PRK10263 DNA translocase FtsK; Provisional
Probab=55.72 E-value=3.3e+02 Score=30.61 Aligned_cols=21 Identities=19% Similarity=0.039 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 013144 370 WSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 370 ~~~~~~~~~~~g~l~dr~g~~ 390 (449)
..|+++|.++...+...+|.-
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~v 161 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSS 161 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHH
Confidence 457888888888888888765
No 320
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=53.15 E-value=25 Score=26.14 Aligned_cols=51 Identities=20% Similarity=0.120 Sum_probs=42.7
Q ss_pred hhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhc
Q 013144 134 SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (449)
Q Consensus 134 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~ 184 (449)
...|=+.++|.-.+++.++.+++..|+.-+.+-=.++..+..+|..+..+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 567889999999999999999999999988887777777777777665544
No 321
>PRK03612 spermidine synthase; Provisional
Probab=52.52 E-value=2.6e+02 Score=28.07 Aligned_cols=31 Identities=13% Similarity=-0.102 Sum_probs=23.1
Q ss_pred cchhhHhhHHHHHHHHHHHHHHHHH-HHHHHh
Q 013144 360 RQASWFSAVPWSVMAFTGYLGGLLS-DMLIQR 390 (449)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~g~l~-dr~g~~ 390 (449)
..+|.++....+|+++|.++.+++. ..+|-.
T Consensus 145 ~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~ 176 (521)
T PRK03612 145 HNVATVLAADYLGALVGGLAFPFLLLPRLGLI 176 (521)
T ss_pred hhhhhhHhHHhHHHHHHHHHHHHHHHHhcchH
Confidence 4577888888888888888877654 467754
No 322
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=52.33 E-value=1.2e+02 Score=24.39 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=26.7
Q ss_pred chhhHHHHHHHHHHHHHhhccchhhhhhcCCc
Q 013144 133 RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK 164 (449)
Q Consensus 133 ~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr 164 (449)
+..+.++.+...++..+..+-.|.|+-.+...
T Consensus 95 P~~~~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred CchHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 35667888888889999999999999998865
No 323
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=51.31 E-value=2.4e+02 Score=27.43 Aligned_cols=147 Identities=10% Similarity=-0.081 Sum_probs=75.6
Q ss_pred hhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh-hCchHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCHHHHHH
Q 013144 215 ARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEY 293 (449)
Q Consensus 215 ~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (449)
.|..|+++|--...+.....+.-..++....|.+... +++++..+...+-.++..+...+.--.-++..-
T Consensus 11 ~~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i~~A~~s~~Ga~~Gl--------- 81 (442)
T COG1457 11 IEPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGIFMAYFSYQGARTGL--------- 81 (442)
T ss_pred CCCCChhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhccccCC---------
Confidence 4667888885555666665555555555555554433 567766655444333333333322111111100
Q ss_pred HHHhccCccccCCCCCCCCCchhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccchhhHhhHHHHHH
Q 013144 294 ILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVM 373 (449)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 373 (449)
+....-|..+-.+--+...+...+...+.++.+.++.-.... ..+.....+...+.++..
T Consensus 82 ------------------pqmi~sR~~fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~~--~~~~~~~~~~ili~g~l~ 141 (442)
T COG1457 82 ------------------PQMILSRYPFGVKGSILPSLLNGITLIGWFGVNVILSGIAIG--SGTGLPVWAGILIIGVLM 141 (442)
T ss_pred ------------------ChheeecccccchhHHHHHHHHHHHHhhHHHHHHHHhccccc--cCCCCcHHHHHHHHHHHH
Confidence 000011233333444556666666667777777665544311 113334444555566666
Q ss_pred HHHHHHHHHHHHHHHHh
Q 013144 374 AFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 374 ~~~~~~~g~l~dr~g~~ 390 (449)
.+..+++-+...++.|-
T Consensus 142 ~l~~ifG~r~l~~l~~~ 158 (442)
T COG1457 142 TLVTIFGYRALHKLERI 158 (442)
T ss_pred HHHHHHhHHHHHHHHHH
Confidence 77777777787777665
No 324
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=48.56 E-value=55 Score=27.58 Aligned_cols=29 Identities=10% Similarity=-0.065 Sum_probs=12.4
Q ss_pred HHHHHHHHhhhCchHHHHHHHHHHHHHHH
Q 013144 242 LVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (449)
Q Consensus 242 ~~l~~~l~~~~gwr~~f~~~~~~~~~~~~ 270 (449)
+.+++.......-.|.....+++.+...+
T Consensus 43 Sl~~~~~l~~ip~~wiLGlLGliPI~lGi 71 (191)
T PF03596_consen 43 SLLGAFGLLFIPPEWILGLLGLIPIYLGI 71 (191)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 33344433333444444444444444444
No 325
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=48.43 E-value=1.9e+02 Score=27.17 Aligned_cols=17 Identities=18% Similarity=0.116 Sum_probs=12.1
Q ss_pred hhhcCCchHHHHHHHHH
Q 013144 158 VDYYGGKIIMAWGVALW 174 (449)
Q Consensus 158 ~dr~Grr~~l~~~~~~~ 174 (449)
.||+.-.|++.+.+-+.
T Consensus 208 ~e~ft~sKllav~~si~ 224 (416)
T KOG2765|consen 208 VERFTLSKLLAVFVSIA 224 (416)
T ss_pred cchhhHHHHHHHHHhhc
Confidence 89999888866544433
No 326
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=48.00 E-value=72 Score=25.63 Aligned_cols=42 Identities=10% Similarity=0.166 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHh
Q 013144 140 QSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (449)
Q Consensus 140 ~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~ 181 (449)
+.-|.+++.+.+.+.|++.+|..+++..........++..++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~ii 100 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLII 100 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 346888999999999999999988743333333333444333
No 327
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=47.82 E-value=1.3e+02 Score=24.79 Aligned_cols=59 Identities=17% Similarity=0.139 Sum_probs=32.8
Q ss_pred ccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh------CchHHHHHHHHHHHHHHHHHHHh
Q 013144 217 WFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA------GIFGPFVIFGLSGFLWVLVWLSA 275 (449)
Q Consensus 217 ~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~------gwr~~f~~~~~~~~~~~~~~~~~ 275 (449)
.+|..++.+..+.+.++.-.+...--.+=+.+.... .+...+++.++++.+..++.-..
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V 78 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSV 78 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhccc
Confidence 345555556665555544444433334444443322 47778888888877766655443
No 328
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=47.23 E-value=50 Score=28.57 Aligned_cols=94 Identities=17% Similarity=0.224 Sum_probs=55.4
Q ss_pred chhhhhhcCCch--------HHHHHHHHHHHHHHHh-hhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhh
Q 013144 154 GGTLVDYYGGKI--------IMAWGVALWSLATFLT-PWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERA 224 (449)
Q Consensus 154 ~G~l~dr~Grr~--------~l~~~~~~~~i~~~~~-~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg 224 (449)
.+.++||||-+. ++++|.++-.+..-+. .+...-+...=...-.-.|+|.|..+.++..-+.+.+| +...
T Consensus 127 laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~ 205 (241)
T PF11299_consen 127 LAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALAMASGVGSGSMMAAASGALAAAYP-EMAD 205 (241)
T ss_pred eeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHHHHcCCcHHHHHHHHHHHHHHHCc-chHH
Confidence 378899998642 4444444443332221 11100111122344556899999999999999999996 5556
Q ss_pred HHHHHHHHhhhhhhHhHHHHHHHH
Q 013144 225 RAVAIAMGGFTSGNAIGLVLSPIL 248 (449)
Q Consensus 225 ~~~~~~~~~~~~G~~~g~~l~~~l 248 (449)
...++.....-+..+.|-.+.-++
T Consensus 206 ~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 206 QILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677776666666666555544443
No 329
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=46.95 E-value=88 Score=31.67 Aligned_cols=64 Identities=17% Similarity=0.151 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhh
Q 013144 188 SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ 251 (449)
Q Consensus 188 ~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~ 251 (449)
|.++++--.++.|++.........-+.-+-+|++-|..+.+++....++|..+..++.......
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6788888899999999998888888888889999999999999999999999999988776544
No 330
>PRK02237 hypothetical protein; Provisional
Probab=46.56 E-value=43 Score=24.96 Aligned_cols=51 Identities=16% Similarity=0.011 Sum_probs=41.7
Q ss_pred hhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhc
Q 013144 134 SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (449)
Q Consensus 134 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~ 184 (449)
+..|=+.++|.-.+++.++.+++..|+.-+-+-=.+|..+..+|..+.-+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 447899999999999999999999999988777777777777776655444
No 331
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=43.38 E-value=2.6e+02 Score=25.53 Aligned_cols=31 Identities=16% Similarity=0.187 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHhhhhhhhh-hHHHHHHhhccC
Q 013144 189 LLALLAMRAVVGLAEGVAL-PAMNNMVARWFP 219 (449)
Q Consensus 189 ~~~l~~~r~l~G~g~g~~~-~~~~~~i~~~~~ 219 (449)
...-.+--.+.+++.|... ....-++.|...
T Consensus 260 ~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~ 291 (317)
T PF02535_consen 260 SSSDIVSGILLAFAAGTFLYVAFVELLPEEFH 291 (317)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334445566777766543 333334444443
No 332
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=41.54 E-value=3.1e+02 Score=25.92 Aligned_cols=18 Identities=22% Similarity=0.364 Sum_probs=10.5
Q ss_pred HHhhccccHHHHHHHHHH
Q 013144 318 RRLLSKMPTWSIIVANAM 335 (449)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~ 335 (449)
++.+++|.++...+...+
T Consensus 239 ~~~~~nP~~~a~~lgli~ 256 (385)
T PF03547_consen 239 LKLFKNPPLIAIILGLII 256 (385)
T ss_pred HHHHhCcHHHHHHHHHHH
Confidence 456667776665554444
No 333
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=38.28 E-value=77 Score=25.53 Aligned_cols=51 Identities=12% Similarity=0.039 Sum_probs=35.2
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHh
Q 013144 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAI 240 (449)
Q Consensus 187 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~ 240 (449)
+++..+++.-++.|+|. ..+.|.+++--.++++-|..+|+-..-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 45555665555555543 3456667777788888899999988888776554
No 334
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=37.53 E-value=2.2e+02 Score=29.82 Aligned_cols=44 Identities=11% Similarity=0.001 Sum_probs=29.1
Q ss_pred cCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhh
Q 013144 161 YGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (449)
Q Consensus 161 ~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 205 (449)
-||.+-++++.++++++++...+.. +..|.+..+-++.+++.++
T Consensus 54 ~~R~~~l~~t~~~f~i~sl~v~ll~-~~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 54 TGRLKNVIFTLICFSIASFSVELLF-GKPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHH
Confidence 3566778888888888887766551 4555666666666665544
No 335
>PTZ00370 STEVOR; Provisional
Probab=37.41 E-value=1.9e+02 Score=26.02 Aligned_cols=37 Identities=5% Similarity=-0.025 Sum_probs=20.7
Q ss_pred hHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHhc
Q 013144 240 IGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (449)
Q Consensus 240 ~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 276 (449)
.|+..+.......+|-..-++..+++++++++..++.
T Consensus 243 agtAAtaAsaaF~Pygiaalvllil~vvliilYiwly 279 (296)
T PTZ00370 243 AGTAASAASSAFYPYGIAALVLLILAVVLIILYIWLY 279 (296)
T ss_pred cchHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444443344666666666666666666655554
No 336
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=36.93 E-value=1.7e+02 Score=28.65 Aligned_cols=12 Identities=17% Similarity=0.221 Sum_probs=10.2
Q ss_pred hhHHHHHHHHHH
Q 013144 187 TSLLALLAMRAV 198 (449)
Q Consensus 187 ~~~~~l~~~r~l 198 (449)
-+||.+++.|++
T Consensus 179 ~syWLFY~vrIl 190 (505)
T PF06638_consen 179 FSYWLFYGVRIL 190 (505)
T ss_pred HHHHHHhhheee
Confidence 689999998886
No 337
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=36.38 E-value=90 Score=26.12 Aligned_cols=24 Identities=17% Similarity=0.412 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhhccchhhhhhcCC
Q 013144 140 QSSFLWGYLVSPIAGGTLVDYYGG 163 (449)
Q Consensus 140 ~s~~~~~~~~~~~~~G~l~dr~Gr 163 (449)
+.-|.+++.+++++.|++.||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 346788889999999999999885
No 338
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=36.05 E-value=1.1e+02 Score=19.04 Aligned_cols=31 Identities=23% Similarity=0.198 Sum_probs=14.6
Q ss_pred hHHHHHHHHHhhhC----chHHHHHHHHHHHHHHH
Q 013144 240 IGLVLSPILMSQAG----IFGPFVIFGLSGFLWVL 270 (449)
Q Consensus 240 ~g~~l~~~l~~~~g----wr~~f~~~~~~~~~~~~ 270 (449)
+|..+++++...++ +.+.-++.+++..+.++
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill 40 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILL 40 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHH
Confidence 44444555444433 35544555555444433
No 339
>COG2119 Predicted membrane protein [Function unknown]
Probab=35.39 E-value=2.3e+02 Score=23.68 Aligned_cols=56 Identities=5% Similarity=0.053 Sum_probs=37.0
Q ss_pred hhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHH
Q 013144 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (449)
Q Consensus 124 ~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~ 179 (449)
.+..+.+......--......++..++...+.++++|+..|++-.++.+++.+..+
T Consensus 124 aLaA~~~~~~~V~~Gt~lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal 179 (190)
T COG2119 124 ALAADYHSPWAVFAGTTLGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFAL 179 (190)
T ss_pred HHhhcCCCceeeehhhHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 34455554322222223355667778888889999999999988888777666553
No 340
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=35.26 E-value=63 Score=24.17 Aligned_cols=31 Identities=19% Similarity=0.129 Sum_probs=22.8
Q ss_pred hhhCchHHHHHHHHHHHHHHHHHHHhcCCCC
Q 013144 250 SQAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (449)
Q Consensus 250 ~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (449)
+..+|+.+|++...++++.+.+.+...||..
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 4568999999877777777777777666554
No 341
>COG4769 Predicted membrane protein [Function unknown]
Probab=34.75 E-value=90 Score=25.37 Aligned_cols=54 Identities=11% Similarity=0.116 Sum_probs=36.7
Q ss_pred HHHHHHHHhhccchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhh
Q 013144 142 SFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAE 203 (449)
Q Consensus 142 ~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~ 203 (449)
.+.+...+.+...-++..++|+|.+=.++.-++ .++. +|..++.+.+++.|-..
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~--hNl~QLivas~Lv~~~~ 134 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFT--HNLGQLIVASFLVFTTS 134 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHH--HhHHHHHHHHHHHhcch
Confidence 344555566666678888999988755544333 3456 89999999998876543
No 342
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=34.60 E-value=1.9e+02 Score=21.42 Aligned_cols=27 Identities=7% Similarity=-0.005 Sum_probs=15.3
Q ss_pred HHHHHHhhhhhhHhHHHHHHHHHhhhC
Q 013144 227 VAIAMGGFTSGNAIGLVLSPILMSQAG 253 (449)
Q Consensus 227 ~~~~~~~~~~G~~~g~~l~~~l~~~~g 253 (449)
+|.......+..++|..+|.+|-..++
T Consensus 45 ~g~IG~~~v~pil~G~~lG~WLD~~~~ 71 (100)
T TIGR02230 45 FGLIGWSVAIPTLLGVAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 334444444556666666666666665
No 343
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=34.50 E-value=1.3e+02 Score=19.54 Aligned_cols=39 Identities=13% Similarity=0.116 Sum_probs=21.0
Q ss_pred hhhhHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHH
Q 013144 235 TSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWL 273 (449)
Q Consensus 235 ~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 273 (449)
-+|.++|.+.+..-...+++.....+..+.+++..++..
T Consensus 12 il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~ 50 (57)
T PF11151_consen 12 ILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIA 50 (57)
T ss_pred HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 345555555544444455666666665555555554444
No 344
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=33.87 E-value=19 Score=28.15 Aligned_cols=17 Identities=12% Similarity=-0.005 Sum_probs=8.6
Q ss_pred hHHHHHHHHHHHHHHHH
Q 013144 255 FGPFVIFGLSGFLWVLV 271 (449)
Q Consensus 255 r~~f~~~~~~~~~~~~~ 271 (449)
||++++..+++++++++
T Consensus 1 RW~l~~iii~~i~l~~~ 17 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLF 17 (130)
T ss_pred CeeeHHHHHHHHHHHHH
Confidence 56666555544444333
No 345
>PRK10692 hypothetical protein; Provisional
Probab=32.31 E-value=1.1e+02 Score=21.66 Aligned_cols=17 Identities=24% Similarity=0.130 Sum_probs=8.0
Q ss_pred CchHHHHHHHHHHHHHH
Q 013144 163 GKIIMAWGVALWSLATF 179 (449)
Q Consensus 163 rr~~l~~~~~~~~i~~~ 179 (449)
||...+++.+++++|.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (92)
T PRK10692 3 RKNASLLGNVLMGLGLV 19 (92)
T ss_pred chhhHHHhhHHHHHHHH
Confidence 44444445444444443
No 346
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=31.65 E-value=3.1e+02 Score=28.73 Aligned_cols=43 Identities=12% Similarity=0.089 Sum_probs=29.5
Q ss_pred CCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhh
Q 013144 162 GGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (449)
Q Consensus 162 Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 205 (449)
||.+-++++.++++++++...+.. +..|.+..+-++.+++.++
T Consensus 55 ~R~~~l~it~~~f~i~sl~v~ll~-~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 55 GRLKNLIITLSCFSIASFLVQLLF-PKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHH
Confidence 567788888888888888776651 4555555555666665554
No 347
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=31.47 E-value=3.2e+02 Score=23.12 Aligned_cols=31 Identities=26% Similarity=0.420 Sum_probs=23.1
Q ss_pred cchhhHHHHHHHHhhhhhhHhHHHHHHHHHh
Q 013144 220 QTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (449)
Q Consensus 220 ~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~ 250 (449)
.++.+++.++...+..+|.++|..+..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4567888888777778888888887776643
No 348
>COG0814 SdaC Amino acid permeases [Amino acid transport and metabolism]
Probab=30.70 E-value=5e+02 Score=25.08 Aligned_cols=26 Identities=12% Similarity=0.026 Sum_probs=18.9
Q ss_pred cchhhHHHHHHHHhhhhhhHhHHHHH
Q 013144 220 QTERARAVAIAMGGFTSGNAIGLVLS 245 (449)
Q Consensus 220 ~~~rg~~~~~~~~~~~~G~~~g~~l~ 245 (449)
++.++..+.+..+..+.|...-|...
T Consensus 9 ~s~~~~vl~l~gT~IGAGvL~lP~a~ 34 (415)
T COG0814 9 SSDLGGVLILAGTAIGAGVLFLPVAF 34 (415)
T ss_pred cchHHHHHHHHccccccchhhhhHHh
Confidence 46677788888887777777777654
No 349
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=30.39 E-value=5.4e+02 Score=25.36 Aligned_cols=31 Identities=10% Similarity=0.000 Sum_probs=19.3
Q ss_pred CCchHHHHHHHHHHHHHHHhhhccchhHHHHHH
Q 013144 162 GGKIIMAWGVALWSLATFLTPWAADTSLLALLA 194 (449)
Q Consensus 162 Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~ 194 (449)
|.|+......+.+.++.++-++. ++|....+
T Consensus 339 ~~~~~~~~~~~t~~~sa~WHG~~--~gYyl~fl 369 (465)
T PLN02332 339 GKKPGFFQLLATQTVSAVWHGLY--PGYILFFV 369 (465)
T ss_pred CcchhHHHHHHHHHHHHHHhcCC--cHHHHHHH
Confidence 44555555556666777777777 66665543
No 350
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=29.81 E-value=2.4e+02 Score=21.14 Aligned_cols=65 Identities=9% Similarity=-0.063 Sum_probs=36.5
Q ss_pred cchhhhhhcCCchHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhcc
Q 013144 153 AGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWF 218 (449)
Q Consensus 153 ~~G~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~ 218 (449)
..=+.+|.+.|+...+...+.+.++..+.+.+. ++...=++--+-.|+|..........+..|-.
T Consensus 19 ~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~al-k~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l 83 (106)
T COG2076 19 TLLKYSDGFTRLWPSILTIVGYGLSFYLLSLAL-KTIPLGVAYAIWTGIGIVGTALVGVLLFGESL 83 (106)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHHHH-hhCchHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 334677777788777777777777766666552 22333233334556665554444444444433
No 351
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=28.71 E-value=1.3e+02 Score=21.50 Aligned_cols=39 Identities=15% Similarity=0.101 Sum_probs=26.4
Q ss_pred HHHHhhccchhhhhhcCC-------chHHHHHHHHHHHHHHHhhhc
Q 013144 146 GYLVSPIAGGTLVDYYGG-------KIIMAWGVALWSLATFLTPWA 184 (449)
Q Consensus 146 ~~~~~~~~~G~l~dr~Gr-------r~~l~~~~~~~~i~~~~~~~~ 184 (449)
+...+.+.++++.+|..+ ++.+.++.++...+.++++..
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayq 75 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQ 75 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 334445555666666554 778888888888888887765
No 352
>PRK15049 L-asparagine permease; Provisional
Probab=28.53 E-value=5.8e+02 Score=25.37 Aligned_cols=20 Identities=20% Similarity=0.326 Sum_probs=10.6
Q ss_pred CchHHHHHHHHHHHHHHHHH
Q 013144 253 GIFGPFVIFGLSGFLWVLVW 272 (449)
Q Consensus 253 gwr~~f~~~~~~~~~~~~~~ 272 (449)
..|+...+.....++..+.+
T Consensus 446 ~~~~~~~~~~~~~~~~~~~~ 465 (499)
T PRK15049 446 NGTYTIAALPIIGILLVIGW 465 (499)
T ss_pred chHHHHHHHHHHHHHHHHHH
Confidence 36666666555544444444
No 353
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=27.94 E-value=2.4e+02 Score=20.40 Aligned_cols=39 Identities=15% Similarity=0.409 Sum_probs=26.3
Q ss_pred hHHHhhcc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 316 PFRRLLSK--MPTWSIIVANAMHSWGFFVILSWMPIYFNFV 354 (449)
Q Consensus 316 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (449)
.++++.|. +..+.+.+..+..++++.....+.|..+...
T Consensus 6 ~f~~L~r~r~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~ 46 (91)
T PF04341_consen 6 EFQELVRRRRRLAWPLSAIFLVLYFGFVLLSAFAPELMATP 46 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHcCc
Confidence 45555544 3355666677777777777888888887764
No 354
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=27.56 E-value=92 Score=23.67 Aligned_cols=24 Identities=17% Similarity=0.041 Sum_probs=15.3
Q ss_pred chhHHHhhccccHHHHHHHHHHHH
Q 013144 314 IPPFRRLLSKMPTWSIIVANAMHS 337 (449)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ 337 (449)
....+.++++++++...+......
T Consensus 32 ~~~~~~Ll~n~~y~ipf~lNq~GS 55 (113)
T PF10639_consen 32 LQEIKFLLLNPKYIIPFLLNQSGS 55 (113)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHH
Confidence 445667788888777666555443
No 355
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=26.67 E-value=6.4e+02 Score=25.03 Aligned_cols=76 Identities=12% Similarity=0.028 Sum_probs=53.9
Q ss_pred HHHHhhhhhhhhhHHHHHHhhccCc-chhhHHHHHHHHhhhhh-hHhHHHHHHHHHhhhCchHHHHHHHHHHHHHHHH
Q 013144 196 RAVVGLAEGVALPAMNNMVARWFPQ-TERARAVAIAMGGFTSG-NAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLV 271 (449)
Q Consensus 196 r~l~G~g~g~~~~~~~~~i~~~~~~-~~rg~~~~~~~~~~~~G-~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 271 (449)
-...|++.-.....--+-+.+.+|. +++...+|-++...++- .++.-.+++-+....||-+.-.+.-++.++..++
T Consensus 291 vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~l 368 (509)
T COG3202 291 VLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVL 368 (509)
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 3445555556666666677777873 45888888888777776 6677778888999999998887766666555443
No 356
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=25.80 E-value=4.4e+02 Score=24.97 Aligned_cols=26 Identities=12% Similarity=0.156 Sum_probs=20.8
Q ss_pred HhhhhhhhhhhhhhcCCCchhhHHHH
Q 013144 115 RVVMSVAIVPLSLAHGWSRSFSGIVQ 140 (449)
Q Consensus 115 ~~~~~~~~~~l~~~~~~~~~~~g~~~ 140 (449)
.-.....+....+++|+++...|.+.
T Consensus 238 Ae~lv~sIe~~v~~~Glp~afiGvII 263 (366)
T PRK10599 238 TKMNASPLETLLTSMNAPVAFTGFLV 263 (366)
T ss_pred HHHhHhhHHHHHHhcCCCHHHHHHHH
Confidence 44556677888899999999999876
No 357
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=25.70 E-value=6.2e+02 Score=24.54 Aligned_cols=60 Identities=3% Similarity=-0.123 Sum_probs=30.0
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------hCCcccchhhHhhHHHHHHHHHHHHHHHH
Q 013144 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFV----------YHIDLRQASWFSAVPWSVMAFTGYLGGLL 383 (449)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l 383 (449)
...+...+..+.....+..+.--+-.++++. .+....+.+.+...+.+.+++.....-.+
T Consensus 298 g~lI~W~v~~fllglvygs~fg~l~~fL~~n~avrqave~~e~ag~le~~Flv~lfsIisil~a~~~V~~ 367 (536)
T COG3559 298 GSLILWTVGLFLLGLVYGSVFGGLGDFLGDNTAVRQAVERMEGAGALEQAFLVLLFSIISILAAAFAVSL 367 (536)
T ss_pred CccHHHHHHHHHHHHHHHHHhhhhhhhhcCcHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555665555555554444444331 23333444455556666665555444333
No 358
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=25.64 E-value=2e+02 Score=18.93 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=15.6
Q ss_pred HHhhhC-----chHHHHHHHHHH---HHHHHHHHHhcCCCC
Q 013144 248 LMSQAG-----IFGPFVIFGLSG---FLWVLVWLSATSSTP 280 (449)
Q Consensus 248 l~~~~g-----wr~~f~~~~~~~---~~~~~~~~~~~~~~~ 280 (449)
+.+++| +|..|.+..++. ++.=++.++..|+.|
T Consensus 20 lA~~~gid~~~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 20 LAEYFGIDPTLVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 445555 455555544432 222233445555544
No 359
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=25.61 E-value=1.4e+02 Score=21.08 Aligned_cols=17 Identities=24% Similarity=0.202 Sum_probs=8.1
Q ss_pred CchHHHHHHHHHHHHHH
Q 013144 163 GKIIMAWGVALWSLATF 179 (449)
Q Consensus 163 rr~~l~~~~~~~~i~~~ 179 (449)
||...+++..++++|.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMV 19 (89)
T ss_pred chhhHHHhhHHHHHhHH
Confidence 44444555555544443
No 360
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=25.51 E-value=4.7e+02 Score=23.06 Aligned_cols=25 Identities=24% Similarity=0.266 Sum_probs=12.5
Q ss_pred hHHHHHHHHhhhhhhHhHHHHHHHH
Q 013144 224 ARAVAIAMGGFTSGNAIGLVLSPIL 248 (449)
Q Consensus 224 g~~~~~~~~~~~~G~~~g~~l~~~l 248 (449)
.+.....-.+.-+|+++|...+..-
T Consensus 9 ~~~~~~illg~~iGg~~G~~~~~~~ 33 (248)
T PF11368_consen 9 LRFLLLILLGGLIGGFIGFFIGRIG 33 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555555555444333
No 361
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=25.36 E-value=4.8e+02 Score=23.13 Aligned_cols=50 Identities=16% Similarity=0.280 Sum_probs=27.0
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHh
Q 013144 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAI 240 (449)
Q Consensus 187 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~ 240 (449)
.|...++.+-...|+-... ....-.+....| +|.....+...++++|..+
T Consensus 32 ~s~~FyY~sg~~lGv~~s~--li~~~~~~k~lP--rk~~~~~~l~gg~~~~~y~ 81 (249)
T PF10225_consen 32 RSVLFYYSSGISLGVLASL--LILLFQLSKLLP--RKSMFYAVLYGGWSFGLYF 81 (249)
T ss_pred cChhHHHhhhHHHHHHHHH--HHHHHHHHHHcc--CcchhHHHHhhhhHHHHHH
Confidence 6777777776666664332 333445678888 4444444444434444433
No 362
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.88 E-value=89 Score=30.90 Aligned_cols=33 Identities=15% Similarity=0.294 Sum_probs=22.0
Q ss_pred CcccchhhHhhHHHHHHHHHHHHHHHHHHHHHH
Q 013144 357 IDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (449)
Q Consensus 357 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 389 (449)
.+++.=|-+.+...+..++..+++|+.+-|+-+
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rlyk 388 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARLYK 388 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhhHh
Confidence 567666666666666666777777777777644
No 363
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=24.19 E-value=6.5e+02 Score=24.25 Aligned_cols=49 Identities=16% Similarity=0.107 Sum_probs=28.7
Q ss_pred HHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHH
Q 013144 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS 245 (449)
Q Consensus 197 ~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~ 245 (449)
++.|+..|........++.+..+-++---+.++...+.-+|.++.++++
T Consensus 283 ~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 283 IIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 4455555555555555566666555554567777666666666555544
No 364
>PF07556 DUF1538: Protein of unknown function (DUF1538); InterPro: IPR011435 This family of protenis of unknown function contains several conserved glycines and phenylalanines.
Probab=24.04 E-value=4.7e+02 Score=22.54 Aligned_cols=78 Identities=22% Similarity=0.166 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhHHHHHHhhcc--CcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhCchHHHHHHHHH
Q 013144 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWF--PQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLS 264 (449)
Q Consensus 187 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~--~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~ 264 (449)
.+.|.++..-++.|+......|...++..+.- .+.+-.+..=+...+.++|..++--+...+ +||...+++....
T Consensus 60 ~~~~~l~~~gf~lGf~~t~AEPal~vL~~qve~vs~G~i~~~~l~~~vaiGVg~~i~lg~lRIi---~g~~l~~~l~~~Y 136 (212)
T PF07556_consen 60 GSLWLLLLFGFVLGFLVTIAEPALRVLADQVEEVSGGSIPKSVLILAVAIGVGIFIALGMLRII---FGIPLWYFLIPGY 136 (212)
T ss_pred CCcEEeHHHHHHHHHHHHhhCcHHHHHHHHHHHhCcCCcchhHHHHHHHHHHHHHHHHHHHHHH---hCCcHHHHHHHHH
Confidence 57888888899999999999998887765432 222223333344444444444443333333 3777666554444
Q ss_pred HHH
Q 013144 265 GFL 267 (449)
Q Consensus 265 ~~~ 267 (449)
.++
T Consensus 137 ~l~ 139 (212)
T PF07556_consen 137 ILV 139 (212)
T ss_pred HHH
Confidence 433
No 365
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=24.03 E-value=3.3e+02 Score=21.53 Aligned_cols=27 Identities=11% Similarity=0.113 Sum_probs=19.9
Q ss_pred HHhhccCcchhhHHHHHHHHhhhhhhH
Q 013144 213 MVARWFPQTERARAVAIAMGGFTSGNA 239 (449)
Q Consensus 213 ~i~~~~~~~~rg~~~~~~~~~~~~G~~ 239 (449)
-+.|++|++.|....+.+........-
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~k~ 85 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAVKS 85 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 367999999999888877755544433
No 366
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=23.80 E-value=6.6e+02 Score=24.21 Aligned_cols=48 Identities=10% Similarity=0.082 Sum_probs=26.3
Q ss_pred HHHhhhhhhhhhHHHHHHhhccCcchhhHHHHHHHHhhhhhhHhHHHHH
Q 013144 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS 245 (449)
Q Consensus 197 ~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~ 245 (449)
++.|+..|........++ |...-++---+.++...+...|.+..++..
T Consensus 297 ~iiG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 297 TLIGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 344454454444445444 445555555667777666666666555543
No 367
>COG1113 AnsP Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]
Probab=23.76 E-value=7e+02 Score=24.43 Aligned_cols=23 Identities=22% Similarity=0.267 Sum_probs=15.7
Q ss_pred hccCcchhhHHHHHHHHhhhhhh
Q 013144 216 RWFPQTERARAVAIAMGGFTSGN 238 (449)
Q Consensus 216 ~~~~~~~rg~~~~~~~~~~~~G~ 238 (449)
..+|..-+|...++....+..+.
T Consensus 196 GffP~G~~g~~~~~~~v~Faf~G 218 (462)
T COG1113 196 GFFPNGFLGFLSALQIVMFAFGG 218 (462)
T ss_pred CcCCCchHHHHHHHHHHHHHHhh
Confidence 35777778888887766665544
No 368
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=23.53 E-value=4.9e+02 Score=22.62 Aligned_cols=34 Identities=9% Similarity=-0.188 Sum_probs=27.3
Q ss_pred CCcccchhhHhhHHHHHHHHHHHHHHHHHHHHHH
Q 013144 356 HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (449)
Q Consensus 356 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 389 (449)
.-|+.+-+.....++++.....+..|..++++..
T Consensus 160 tgS~~~Gal~mlaFGlGTlP~ll~~G~~s~~~s~ 193 (232)
T COG2836 160 TGSAFEGALVMLAFGLGTLPNLLAMGIFSSKLSK 193 (232)
T ss_pred cCCHHHHHHHHHHHhhcccHHHHHHHHHHHHHHH
Confidence 3467778888889999998888888888888753
No 369
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=23.26 E-value=3.9e+02 Score=26.76 Aligned_cols=39 Identities=15% Similarity=0.056 Sum_probs=24.9
Q ss_pred CcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC---chHH
Q 013144 219 PQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG---IFGP 257 (449)
Q Consensus 219 ~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g---wr~~ 257 (449)
.+++||..+...-....+.+.++..+++.+...++ |+..
T Consensus 291 ~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~~W~~~ 332 (521)
T PF02990_consen 291 SPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGGKKWKKN 332 (521)
T ss_pred cccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCCCceeeh
Confidence 35667777777666667666776666666655443 6653
No 370
>TIGR00814 stp serine transporter. The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.
Probab=22.77 E-value=6.9e+02 Score=24.00 Aligned_cols=27 Identities=7% Similarity=0.060 Sum_probs=21.1
Q ss_pred CcchhhHHHHHHHHhhhhhhHhHHHHH
Q 013144 219 PQTERARAVAIAMGGFTSGNAIGLVLS 245 (449)
Q Consensus 219 ~~~~rg~~~~~~~~~~~~G~~~g~~l~ 245 (449)
.+++.+..+.+.++..+.|...-|..+
T Consensus 2 ~~~d~~w~~~l~gt~IGaGiL~LP~~a 28 (397)
T TIGR00814 2 TKTDTGWMLGLYGTAIGAGVLFLPIQA 28 (397)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 356678888888888888888888763
No 371
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=22.60 E-value=1.2e+02 Score=17.08 Aligned_cols=18 Identities=17% Similarity=0.248 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013144 368 VPWSVMAFTGYLGGLLSD 385 (449)
Q Consensus 368 ~~~~~~~~~~~~~g~l~d 385 (449)
...+++++.+++.+|+-+
T Consensus 16 AP~iagIi~s~iv~w~~~ 33 (35)
T PF13940_consen 16 APIIAGIIASLIVGWLRN 33 (35)
T ss_pred hHHHHHHHHHHHHHHHHh
Confidence 344555666666666544
No 372
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.58 E-value=3.4e+02 Score=20.40 Aligned_cols=53 Identities=15% Similarity=0.028 Sum_probs=25.5
Q ss_pred cchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhh-C-chHHHHHHHHHHHHHHHHH
Q 013144 220 QTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-G-IFGPFVIFGLSGFLWVLVW 272 (449)
Q Consensus 220 ~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~-g-wr~~f~~~~~~~~~~~~~~ 272 (449)
++.++.+.++--+.--++.++-...-|++.+++ | =.|..++..++++.+.+..
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~ln 91 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLN 91 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 345666666654444444443334445555543 3 3344444444554444433
No 373
>PF04547 Anoctamin: Calcium-activated chloride channel; InterPro: IPR007632 This family contains the anoctamin/TMEM16 proteins which are thought to be calcium-dependent chloride channel [].
Probab=22.48 E-value=7.3e+02 Score=24.21 Aligned_cols=43 Identities=21% Similarity=0.499 Sum_probs=21.4
Q ss_pred chhHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 013144 314 IPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYH 356 (449)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 356 (449)
...+++.+|.-..+.+.+...+...+......++-.++.+.+.
T Consensus 112 ~p~~~r~~r~~~s~~ivl~~i~i~~~~~~~~~~~~~~~~~~~~ 154 (452)
T PF04547_consen 112 YPPWKRILRYLVSVPIVLLFILIVIGIVIGVFYLRIYLTEIYS 154 (452)
T ss_pred CcHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3445555555334444444444444444455556666665544
No 374
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=22.47 E-value=1.1e+02 Score=22.92 Aligned_cols=31 Identities=19% Similarity=0.045 Sum_probs=26.2
Q ss_pred cchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 013144 360 RQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 390 (449)
...|-.++.++...++.+++.++..|+....
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd 84 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPD 84 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCC
Confidence 4567788888888999999999999987554
No 375
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism]
Probab=22.37 E-value=6.3e+02 Score=24.11 Aligned_cols=108 Identities=9% Similarity=0.046 Sum_probs=57.1
Q ss_pred hhHHHHHHHHHHHHHhhccchhhhhhcCCchHHHHHHH-HHHHHHHHhhhc-cchhHHHHHHHHHHHhhhhhhhhhHHHH
Q 013144 135 FSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA-LWSLATFLTPWA-ADTSLLALLAMRAVVGLAEGVALPAMNN 212 (449)
Q Consensus 135 ~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~-~~~i~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~ 212 (449)
.+|-+.....+.+++.++=---++|...+--+++..-. .+.+.++...+- ..+||..-+.+---.|+|.|. .|.+.+
T Consensus 280 ~ig~vsL~lflamALmSlkLweL~~l~lpl~viL~vQ~i~m~lfa~fvtfr~mG~~YdAaV~~~G~~G~gLGA-TPtAia 358 (404)
T COG0786 280 VIGNVSLSLFLAMALMSLKLWELADLALPLLVILAVQTIVMALFAIFVTFRLMGKNYDAAVLAAGHCGFGLGA-TPTAIA 358 (404)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHhcccccCccCC-cHHHHH
Confidence 34444555666666666655556666555443333222 222222211110 126777777766677777765 555555
Q ss_pred HHhhccCcchhhHHHHHHHHhhhhhhHhHHHHHHHHHhhhC
Q 013144 213 MVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (449)
Q Consensus 213 ~i~~~~~~~~rg~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 253 (449)
-+.... +|.|. ..-..++-|++++++.+..+
T Consensus 359 nM~av~-~k~g~---------S~kAf~ivPiVGAffid~in 389 (404)
T COG0786 359 NMQAVT-EKFGP---------SHKAFIVVPIVGAFFIDIIN 389 (404)
T ss_pred hhhcch-hhcCC---------CceeeEEeehHHHHHHHHHH
Confidence 555443 34443 33455677777777776544
No 376
>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.16 E-value=4.5e+02 Score=21.69 Aligned_cols=90 Identities=11% Similarity=0.037 Sum_probs=45.7
Q ss_pred hhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCchH-HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhh
Q 013144 127 LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKII-MAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (449)
Q Consensus 127 ~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~-l~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 205 (449)
+.|++-. ..|-+..+...+...|.. ..+..-+.++|. ..+..+...+.++.+++.. +|...=++..++|.++.-
T Consensus 75 ~kFal~~-TlGnll~i~sf~fLmGP~--~ql~~m~~p~Rl~~T~~~l~~~~~Tly~al~~-ks~iLtllf~ilq~lali- 149 (175)
T KOG2887|consen 75 RKFALLY-TLGNLLAIGSFAFLMGPV--SQLKHMFSPERLPATLSYLATMVLTLYVALWL-KSKILTLLFCILQVLALI- 149 (175)
T ss_pred ceeehhH-HHHHHHHHHHHHHHHhHH--HHHHHhcChhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-
Confidence 4555432 233333333333333322 445555665553 3334444444444444332 677777777788877532
Q ss_pred hhhHHHHHHhhccCcchhhHHH
Q 013144 206 ALPAMNNMVARWFPQTERARAV 227 (449)
Q Consensus 206 ~~~~~~~~i~~~~~~~~rg~~~ 227 (449)
-|.-.++|-.++|.-.
T Consensus 150 ------wYslSyiP~g~~gv~~ 165 (175)
T KOG2887|consen 150 ------WYSLSYIPFGRSGVSK 165 (175)
T ss_pred ------HHHHHhCcchhhHHHH
Confidence 2344567777766543
No 377
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=22.06 E-value=3.1e+02 Score=20.35 Aligned_cols=25 Identities=16% Similarity=0.197 Sum_probs=12.0
Q ss_pred hccchhhhhh-cCCchHHHHHHHHHH
Q 013144 151 PIAGGTLVDY-YGGKIIMAWGVALWS 175 (449)
Q Consensus 151 ~~~~G~l~dr-~Grr~~l~~~~~~~~ 175 (449)
..+.|...|+ ||-++.+.+.+++.+
T Consensus 59 G~~lG~WLD~~~~t~~~~tl~~lllG 84 (100)
T TIGR02230 59 GVAVGIWLDRHYPSPFSWTLTMLIVG 84 (100)
T ss_pred HHHHHHHHHhhcCCCcHHHHHHHHHH
Confidence 3344666664 555554444443333
No 378
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.58 E-value=7.7e+02 Score=24.13 Aligned_cols=24 Identities=17% Similarity=0.232 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHHHHhhccchhhhh
Q 013144 136 SGIVQSSFLWGYLVSPIAGGTLVD 159 (449)
Q Consensus 136 ~g~~~s~~~~~~~~~~~~~G~l~d 159 (449)
-|-+.+...+.+++.+++.|+.+.
T Consensus 325 rGal~saaI~vYAlTs~i~GY~~g 348 (593)
T KOG1277|consen 325 RGALLSAAIVVYALTSPINGYVSG 348 (593)
T ss_pred chHHHHHHHHHHHhcccccccccc
Confidence 566677777777777777776655
No 379
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=21.10 E-value=4.1e+02 Score=20.72 Aligned_cols=13 Identities=8% Similarity=0.082 Sum_probs=7.5
Q ss_pred hhHHHHHHhhccC
Q 013144 207 LPAMNNMVARWFP 219 (449)
Q Consensus 207 ~~~~~~~i~~~~~ 219 (449)
.+.-.++..|...
T Consensus 80 fTTFSTf~~E~~~ 92 (128)
T PRK14199 80 LTTFSTFSYETIN 92 (128)
T ss_pred cccHHHHHHHHHH
Confidence 4555666666654
No 380
>TIGR03727 urea_t_UrtC_arc urea ABC transporter, permease protein UrtC, archaeal type. Members of this protein family are ABC transporter permease subunits restricted to the Archaea. Several lines of evidence suggest this protein is functionally analogous, as well as homologous, to the UrtC subunit of the Corynebacterium glutamicum urea transporter. All members of the operon show sequence similarity to urea transport subunits, the gene is located near the urease structural subunits in two of three species, and partial phylogenetic profiling identifies this permease subunit as closely matching the profile of urea utilization.
Probab=21.09 E-value=4.5e+02 Score=24.89 Aligned_cols=18 Identities=6% Similarity=0.130 Sum_probs=11.8
Q ss_pred hhhhhhHhHHHHHHHHHh
Q 013144 233 GFTSGNAIGLVLSPILMS 250 (449)
Q Consensus 233 ~~~~G~~~g~~l~~~l~~ 250 (449)
..+.|...|+++++.+..
T Consensus 282 lGG~gs~~G~i~Ga~ll~ 299 (364)
T TIGR03727 282 LGGRESLLGAIVATVAIE 299 (364)
T ss_pred cCCCCchHHHHHHHHHHH
Confidence 445667777777776643
No 381
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=20.76 E-value=4e+02 Score=24.31 Aligned_cols=10 Identities=30% Similarity=0.474 Sum_probs=4.1
Q ss_pred chhhHHHHHH
Q 013144 221 TERARAVAIA 230 (449)
Q Consensus 221 ~~rg~~~~~~ 230 (449)
.+|.+..++-
T Consensus 10 ~er~k~~~~G 19 (301)
T PF14362_consen 10 AERNKYAGIG 19 (301)
T ss_pred HHHHHHHHHH
Confidence 4444444433
No 382
>PF13440 Polysacc_synt_3: Polysaccharide biosynthesis protein
Probab=20.40 E-value=5.5e+02 Score=21.98 Aligned_cols=43 Identities=12% Similarity=0.064 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhhCCcccchhhHhhHHHHHHHHHHHHHHHHHH
Q 013144 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSD 385 (449)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 385 (449)
......+.++...+ +++.+.|.+.....+...+..++...+..
T Consensus 200 ~~~~~~~~~li~~~-l~~~~~g~y~~a~~l~~~~~~~~~~~i~~ 242 (251)
T PF13440_consen 200 WLLSQIDRLLIGYF-LGPEAVGIYSVAQRLASLPASLLSSAISS 242 (251)
T ss_pred HHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666642 37788888777666665444344444433
No 383
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=20.35 E-value=3.4e+02 Score=19.52 Aligned_cols=33 Identities=24% Similarity=0.164 Sum_probs=23.6
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccC
Q 013144 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFP 219 (449)
Q Consensus 187 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~ 219 (449)
+--+=++++|.+.|-+.+..-.+......|.-|
T Consensus 29 pit~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~p 61 (89)
T PF04550_consen 29 PITLRLFIGRVILGSAVSVVAGAALIQFPDLPP 61 (89)
T ss_pred CCchhHHhHHHHHhhHHHHHHHHHHhcCCCCCH
Confidence 456678999999999887766665555555544
No 384
>COG2119 Predicted membrane protein [Function unknown]
Probab=20.27 E-value=5.2e+02 Score=21.67 Aligned_cols=21 Identities=24% Similarity=0.289 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 013144 370 WSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 370 ~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.+++.++.+.+.++++|+..|
T Consensus 144 ~l~s~laVl~G~~ia~ki~~r 164 (190)
T COG2119 144 ILASVLAVLLGKLIAGKLPER 164 (190)
T ss_pred HHHHHHHHHHHHHHHccCCHH
Confidence 345666777778888888776
No 385
>COG4721 ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]
Probab=20.19 E-value=4.9e+02 Score=21.33 Aligned_cols=150 Identities=13% Similarity=0.039 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHHHHhhccchhhhhhcCCch-HHHHHHHHHH
Q 013144 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKI-IMAWGVALWS 175 (449)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~ 175 (449)
...+..++.......+..++.++.++...-.-+++++..-+.+..+..++..++.++. ||+ .-+++-++.+
T Consensus 9 dIvi~svlsi~fgvvfl~w~~~~~v~at~lhp~ale~~~~~i~~GiW~maavi~~l~I--------pkpGaAl~~Ev~Aa 80 (192)
T COG4721 9 DIVILSVLSIVFGVVFLGWGYVGNVLATLLHPLALEPFANEILFGIWFMAAVIAALFI--------PKPGAALIGEVLAA 80 (192)
T ss_pred HHHHHHHHHHHHHhheeehhhhhHHHHHhcchhhcCccccchHHHHHHHHHHHeeeee--------cCCcHHHHHHHHHH
Confidence 3344444444444444555555555555544444666555666666666665555542 333 3445555555
Q ss_pred HHHHHhhhccchhHHHHHHHHHHHhhhhhhhhhHHHHHHhhccCcchhhHHHH-HHHHhhhhhhHhHHH-HHHHHHhhhC
Q 013144 176 LATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVA-IAMGGFTSGNAIGLV-LSPILMSQAG 253 (449)
Q Consensus 176 i~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~rg~~~~-~~~~~~~~G~~~g~~-l~~~l~~~~g 253 (449)
+...+.+- +.=..-++.-++||+|.-..+.. +.-+.+..... +.+++.+++.++--. ..|++....|
T Consensus 81 ~ve~ll~s---qfgi~tivsgfvQGlgaE~vFa~--------~kyr~~Sl~~~mlagmg~~~~sf~~eyf~~Gyla~s~~ 149 (192)
T COG4721 81 LVEVLLGS---QFGIGTIVSGFVQGLGAEFVFAV--------TKYRYYSLPVLMLAGMGITLASFVYEYFKLGYLAFSLG 149 (192)
T ss_pred HHHHHHcC---CCCchHHHHHHHHhhhhhHHHHH--------HHHHHhhHHHHHHHhhchhHHHHHHHHHHHhHHhhccc
Confidence 55544421 22223345568899886654332 11122222222 122333333333222 2366666778
Q ss_pred chHHHHHHHHHH
Q 013144 254 IFGPFVIFGLSG 265 (449)
Q Consensus 254 wr~~f~~~~~~~ 265 (449)
|...+.+.-.++
T Consensus 150 fnli~lv~rlIS 161 (192)
T COG4721 150 FNLILLVVRLIS 161 (192)
T ss_pred hhHHHHHHHHHH
Confidence 888776654443
No 386
>PF01810 LysE: LysE type translocator; InterPro: IPR001123 Lysine exporter protein is involved in the efflux of excess L-lysine as a control for intracellular levels of L-lysine. A number of proteins belong to this family. These include the chemotactic transduction protein from Pseudomonas aeruginosa, the threonine efflux protein and a number of uncharacterised proteins from a variety of sources.; GO: 0006865 amino acid transport, 0016020 membrane
Probab=20.11 E-value=5.1e+02 Score=21.45 Aligned_cols=21 Identities=19% Similarity=0.034 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 013144 370 WSVMAFTGYLGGLLSDMLIQR 390 (449)
Q Consensus 370 ~~~~~~~~~~~g~l~dr~g~~ 390 (449)
.++..+.-...+....|.+++
T Consensus 143 ~~~~~~w~~~~~~~~~~~~~~ 163 (191)
T PF01810_consen 143 FLGSLLWFLLLALLGSRLRRK 163 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333444444455555555544
Done!