Query 013159
Match_columns 448
No_of_seqs 206 out of 1926
Neff 5.9
Searched_HMMs 46136
Date Fri Mar 29 01:00:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013159.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013159hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02848 adenylosuccinate lyas 100.0 2.3E-76 5E-81 620.6 33.4 366 74-442 2-375 (458)
2 COG0015 PurB Adenylosuccinate 100.0 2.8E-76 6E-81 610.9 31.3 335 87-442 1-346 (438)
3 PRK09285 adenylosuccinate lyas 100.0 4E-75 8.6E-80 611.6 32.6 362 77-442 2-372 (456)
4 cd03302 Adenylsuccinate_lyase_ 100.0 1.3E-70 2.8E-75 575.5 31.2 335 87-442 1-351 (436)
5 cd01598 PurB PurB_like adenylo 100.0 2.6E-70 5.6E-75 570.2 32.0 342 98-442 1-350 (425)
6 PRK07380 adenylosuccinate lyas 100.0 1.4E-69 3.1E-74 566.4 31.2 325 87-442 2-339 (431)
7 PRK08540 adenylosuccinate lyas 100.0 2.6E-69 5.5E-74 567.8 31.4 338 82-442 1-351 (449)
8 PRK07492 adenylosuccinate lyas 100.0 7.2E-69 1.6E-73 561.8 32.3 329 87-442 1-342 (435)
9 PRK08470 adenylosuccinate lyas 100.0 1.2E-68 2.5E-73 561.5 32.1 325 87-442 2-339 (442)
10 cd01595 Adenylsuccinate_lyase_ 100.0 1.7E-68 3.6E-73 551.1 30.3 324 98-442 1-337 (381)
11 PRK06390 adenylosuccinate lyas 100.0 3.2E-68 7E-73 559.6 30.6 337 82-442 1-351 (451)
12 cd01360 Adenylsuccinate_lyase_ 100.0 1.1E-67 2.3E-72 546.2 32.1 323 90-442 1-336 (387)
13 TIGR00928 purB adenylosuccinat 100.0 5.4E-67 1.2E-71 548.2 29.5 332 87-442 1-345 (435)
14 cd01597 pCLME prokaryotic 3-ca 100.0 1.9E-65 4.1E-70 536.9 32.2 332 87-442 2-346 (437)
15 PRK05975 3-carboxy-cis,cis-muc 100.0 3.9E-65 8.4E-70 520.7 31.3 307 86-420 10-322 (351)
16 PRK09053 3-carboxy-cis,cis-muc 100.0 5.4E-65 1.2E-69 535.5 30.0 339 83-442 3-355 (452)
17 TIGR02426 protocat_pcaB 3-carb 100.0 1.5E-64 3.3E-69 514.2 31.5 306 87-419 2-314 (338)
18 COG0165 ArgH Argininosuccinate 100.0 5.1E-61 1.1E-65 496.5 27.4 327 84-442 3-355 (459)
19 PRK04833 argininosuccinate lya 100.0 8.5E-61 1.8E-65 503.7 27.9 330 85-443 2-355 (455)
20 cd01334 Lyase_I Lyase class I 100.0 9E-61 1.9E-65 483.8 25.0 308 108-440 1-325 (325)
21 PRK06705 argininosuccinate lya 100.0 1.8E-60 3.9E-65 506.1 28.5 331 85-442 10-362 (502)
22 PF00206 Lyase_1: Lyase; Inte 100.0 9.5E-62 2.1E-66 488.5 16.5 294 89-397 1-312 (312)
23 TIGR00838 argH argininosuccina 100.0 3.2E-59 6.9E-64 492.1 27.7 328 86-442 1-352 (455)
24 cd01359 Argininosuccinate_lyas 100.0 1.9E-59 4.2E-64 491.2 25.7 313 103-442 4-332 (435)
25 PRK12308 bifunctional arginino 100.0 2E-59 4.3E-64 509.8 26.3 329 86-442 3-354 (614)
26 PLN02646 argininosuccinate lya 100.0 2.8E-58 6E-63 486.4 26.6 328 85-442 17-368 (474)
27 cd01357 Aspartase Aspartase. T 100.0 1.2E-57 2.5E-62 479.2 28.0 320 103-442 36-391 (450)
28 PRK12273 aspA aspartate ammoni 100.0 3.2E-57 6.9E-62 478.3 28.3 318 105-442 45-398 (472)
29 PRK00485 fumC fumarate hydrata 100.0 3.9E-57 8.4E-62 477.0 27.6 324 104-442 41-396 (464)
30 PRK02186 argininosuccinate lya 100.0 2.6E-57 5.6E-62 511.0 27.9 329 88-442 410-762 (887)
31 PRK00855 argininosuccinate lya 100.0 1.6E-56 3.5E-61 472.0 28.4 311 104-442 29-356 (459)
32 PRK13353 aspartate ammonia-lya 100.0 1.3E-56 2.8E-61 473.8 27.4 319 104-442 42-396 (473)
33 TIGR00979 fumC_II fumarate hyd 100.0 8.9E-57 1.9E-61 473.1 25.5 317 105-442 39-393 (458)
34 cd01362 Fumarase_classII Class 100.0 6.1E-56 1.3E-60 466.6 26.9 325 104-442 37-392 (455)
35 PRK06389 argininosuccinate lya 100.0 6.7E-56 1.5E-60 460.9 26.1 321 86-443 3-348 (434)
36 TIGR00839 aspA aspartate ammon 100.0 3.1E-55 6.7E-60 462.1 27.7 320 103-442 38-394 (468)
37 cd01596 Aspartase_like asparta 100.0 1.7E-54 3.6E-59 455.0 27.6 316 104-442 37-391 (450)
38 KOG1316 Argininosuccinate lyas 100.0 9.6E-55 2.1E-59 429.2 22.2 328 83-442 5-358 (464)
39 PLN00134 fumarate hydratase; P 100.0 8.6E-54 1.9E-58 450.5 27.5 317 105-442 34-388 (458)
40 PRK12425 fumarate hydratase; P 100.0 9.4E-54 2E-58 450.7 27.2 318 105-442 40-394 (464)
41 PRK14515 aspartate ammonia-lya 100.0 8.3E-52 1.8E-56 436.7 25.8 320 104-442 48-402 (479)
42 KOG2700 Adenylosuccinate lyase 100.0 1E-42 2.2E-47 354.0 20.8 318 83-416 6-332 (481)
43 COG0114 FumC Fumarase [Energy 100.0 3.4E-42 7.5E-47 346.6 24.1 319 106-435 42-380 (462)
44 COG1027 AspA Aspartate ammonia 100.0 2.6E-40 5.7E-45 332.2 22.4 318 105-438 44-385 (471)
45 KOG1317 Fumarase [Energy produ 100.0 1.4E-35 3E-40 291.7 16.0 240 187-434 153-404 (487)
46 cd01594 Lyase_I_like Lyase cla 100.0 3.5E-34 7.5E-39 274.1 23.3 200 171-430 16-227 (231)
47 KOG2700 Adenylosuccinate lyase 99.8 4.7E-20 1E-24 188.8 1.5 322 62-416 52-377 (481)
48 PRK08937 adenylosuccinate lyas 99.7 3.4E-17 7.3E-22 156.6 9.0 106 335-443 22-137 (216)
49 PF08328 ASL_C: Adenylosuccina 39.0 24 0.00051 31.2 2.3 12 406-417 1-12 (115)
50 KOG4797 Transcriptional regula 27.0 1.8E+02 0.0038 25.6 5.6 36 200-236 55-90 (123)
51 PF14735 HAUS4: HAUS augmin-li 20.1 5.6E+02 0.012 25.4 8.5 83 168-276 42-125 (238)
No 1
>PLN02848 adenylosuccinate lyase
Probab=100.00 E-value=2.3e-76 Score=620.61 Aligned_cols=366 Identities=69% Similarity=1.095 Sum_probs=318.1
Q ss_pred ccccccccccCCCCCccCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCC---CCCcHHHHHHHHHHHccCC
Q 013159 74 REFELSSLTALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEV---PSFSEEAKSYLQGLIDGFN 150 (448)
Q Consensus 74 ~~~~~~~~~~~sp~dgry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giI---p~~~a~a~~~i~~~~~~~~ 150 (448)
++|++++++++||+++||++++++|+.+|||++++++|++||++|+++|+ +.|+| |+.+.++++.|.+.+.+|.
T Consensus 2 ~~~~~~~~~~~~pl~~ry~~~~~e~~~ifSd~a~~~~~l~vE~ala~a~a---~~g~i~~~P~i~~~aa~~i~~~~~~~~ 78 (458)
T PLN02848 2 RDLELSNLTALSPLDGRYWSKVKDLRPIFSEFGLIRYRVLVEVKWLLKLS---QIPEVTEVPPFSDEANSFLEGIIAGFS 78 (458)
T ss_pred CCCCccccccCCCchhhhcCCcHHHHHHcCHHHHHHHHHHHHHHHHHHHH---hcCCCCCCCCCCHHHHHHHHHHHHhcC
Confidence 35778899999999999998889999999999999999999999999999 88988 8766677777766655576
Q ss_pred cccHHhHHHHHhhhCCcHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013159 151 MDDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALC 230 (448)
Q Consensus 151 ~~d~~~l~~~e~~t~hDv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~ 230 (448)
.+|+++++++++.++|||+++|++|+++++..+++.+.++|||+|+|||||+||+++|++|+++..++.+.|..++++|.
T Consensus 79 ~~d~~~~~~~e~~t~hdv~a~~~~l~~~~~~~~~~~~~~~~vH~G~TsqDi~dTa~~L~lr~a~~~~l~~~L~~l~~aL~ 158 (458)
T PLN02848 79 VDDALEVKKIERVTNHDVKAVEYFLKQKCKSHPELAKVLEFFHFACTSEDINNLSHALMLKEGVNSVVLPTMDEIIKAIS 158 (458)
T ss_pred HhhHHHHHHHHHHhCCCcHHHHHHHHHHhccccchhhhhCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66899999999999999999999999999742222236799999999999999999999999998339999999999999
Q ss_pred HHHHHcccceeeccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhHhhhcccccccccccccccCCCCChhhhHHHHHH
Q 013159 231 EIAKDNANISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVK 310 (448)
Q Consensus 231 ~lA~~~~dt~m~gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~ 310 (448)
++|.+|++++|+||||+|||+|||||+|+++|+++|.|+++||.++.+.|+++|||||+++++..+|++||+.+.+++++
T Consensus 159 ~lA~~~~dt~m~GRTH~Q~A~PiTfG~~~a~w~~~L~r~~~rL~~~~l~g~~~GAvGt~aa~~~~~~~~d~~~v~~~la~ 238 (458)
T PLN02848 159 SLAHEFAYVPMLSRTHGQPASPTTLGKEMANFAYRLSRQRKQLSEVKIKGKFAGAVGNYNAHMSAYPEVDWPAVAEEFVT 238 (458)
T ss_pred HHHHHhcCCeeeccccCccceeehHHHHHHHHHHHHHHHHHHHHHHHhccEeecccchhhhhhhccCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997779999999999998767888999999999999
Q ss_pred HcCCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccceeeecCCCCcccCCCCCCcCchHHHHhhhhhh
Q 013159 311 SLGLSFNPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLG 390 (448)
Q Consensus 311 ~LGL~~~~~~~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~ 390 (448)
.|||..++..+|+.+||++++++++++.++++|.||++|+|.+.++|++.+...++++|||||||||||+.+|+++++++
T Consensus 239 ~LGL~~~~~~~~v~~rD~~~e~~~~La~~a~~l~kia~Di~~~~e~ge~~e~~~~~~~GSS~MP~KrNPv~~E~i~~~a~ 318 (458)
T PLN02848 239 SLGLTFNPYVTQIEPHDYMAELFNAVSRFNNILIDFDRDIWSYISLGYFKQITKAGEVGSSTMPHKVNPIDFENSEGNLG 318 (458)
T ss_pred HhCCCCCCchhhHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcccccCCCCCCcCCCCCCcCcHHHHHHHHHHH
Confidence 99999866656789999999999999999999999999999999999988767678999999999999999999998766
Q ss_pred hhhHHHhhhhhhccccccccccccchH--HHHHhHHH---HHHHHhhcccccccccc
Q 013159 391 KANEDLSFLSMKLPISRWQVRSNLTLL--LIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 391 la~~v~g~la~~L~~s~~qRDl~~~~~--~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
.++.....+...++.+++|||+++|.. .+..++.. ....+..+...++|++|
T Consensus 319 ~~~~~~~~~~~~~~~~~~eRD~~~s~~e~~~~~~~~~~~~al~~~~~~l~~L~v~~~ 375 (458)
T PLN02848 319 LANAELSHLSMKLPISRMQRDLTDSTVLRNMGVGLGHSLLAYKSTLRGIGKLQVNEA 375 (458)
T ss_pred HHHHHHHHHHhcCcchhhccccchhhhhccHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 444444444444466789999998752 22333332 66677777788888765
No 2
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.8e-76 Score=610.86 Aligned_cols=335 Identities=33% Similarity=0.435 Sum_probs=294.6
Q ss_pred CCccCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHHHHHhhhCC
Q 013159 87 LDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNH 166 (448)
Q Consensus 87 ~dgry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~~~e~~t~h 166 (448)
+|+||++ ++|+.+|||++++++|++||++|++|++ ++|+||+++++ .|.+... +...|+++++++|++|||
T Consensus 1 ~~~RY~~--~em~~ifS~~~~~~~~l~vE~ala~A~a---elG~Ip~~a~~---~I~~~~~-~~~~d~~~i~eie~~t~H 71 (438)
T COG0015 1 LDGRYSS--PEMRAIFSEEAKLRAWLKVEAALARAQA---ELGVIPAEAAA---EIDAAAA-FAEFDLERIKEIEAETGH 71 (438)
T ss_pred CCcccCc--HHHHHHcCHHHHHHHHHHHHHHHHHHHH---HhCCCCHHHHH---HHHHHhc-ccccCHHHHHHHHHHhCC
Confidence 5899996 8999999999999999999999999999 89999975554 4554433 455689999999999999
Q ss_pred cHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeecccc
Q 013159 167 DVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTH 246 (448)
Q Consensus 167 Dv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH 246 (448)
||+|++++|+++|++ ++++|||+|+|||||+|||++|++|+++. ++.+.|.+++++|.++|.+|+++||+||||
T Consensus 72 dV~a~v~~l~e~~~~-----~~~~~VH~GaTS~DI~Dta~~L~lk~a~~-ii~~~l~~l~~~L~~~A~~~k~t~m~GRTH 145 (438)
T COG0015 72 DVKALVRALAEKVGE-----EASEYVHFGATSQDIIDTALALQLKEALD-LILPDLKRLIEALAELALEHKDTPMLGRTH 145 (438)
T ss_pred CcHHHHHHHHHhcCc-----ccccceecccchHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCeeccccc
Confidence 999999999999984 38999999999999999999999999999 799999999999999999999999999999
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCCCCccc
Q 013159 247 GQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQI 323 (448)
Q Consensus 247 ~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~qi 323 (448)
||||+|||||+++++|+++|.|+++||.++. +.|+++||+||+++++ +.+ ..+++++++.|||..+|+++|+
T Consensus 146 gq~A~PtT~G~k~A~w~~el~R~~~rL~~~~~~~~~g~i~Ga~Gt~Aa~~----~~~-~~ve~~v~e~LGL~~~p~stq~ 220 (438)
T COG0015 146 GQPAEPTTFGKKFANWLAELLRHLERLEEAEERIIVGKIGGAVGTLAALG----DLG-AEVEERVAEKLGLKPAPISTQV 220 (438)
T ss_pred CCCCccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccchhhHhhcC----chh-HHHHHHHHHHcCCCCCCCCccc
Confidence 9999999999999999999999999999885 7899999999998764 333 4688999999999999998899
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccc--eeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhh
Q 013159 324 ETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAY--FKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSM 401 (448)
Q Consensus 324 ~~rD~~ael~~~la~i~~~L~kia~Di~l~~s~g~--~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~ 401 (448)
.+||++++++++|+++++++.|||+|||+|+..++ +++++.+|++|||+|||||||+.+|++.|++.+++.....+..
T Consensus 221 ~~RD~~ae~~~~La~i~~sl~k~a~dIr~l~~~e~~Ev~E~f~~gq~GSSaMPHKrNPi~~E~~~glar~~r~~~~~~~e 300 (438)
T COG0015 221 SPRDRIAEFFSALALLAGSLEKFARDIRLLQRTEVGEVEEPFAKGQVGSSAMPHKRNPIDSENVTGLARVARALVSTLLE 300 (438)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997444 4488999999999999999999999999877766666666666
Q ss_pred hccccccccccccchHHH------HHhHHHHHHHHhhcccccccccc
Q 013159 402 KLPISRWQVRSNLTLLLI------FFNFDLWLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 402 ~L~~s~~qRDl~~~~~~~------~~~~~~~~~ll~~~~~~~~~~~~ 442 (448)
.+ +++||||+++|.... +-..+-.+..+..+...+.++.|
T Consensus 301 ~~-~~whERdlt~ssver~~Lp~~~~~~~~aL~~~~~vl~~L~v~~~ 346 (438)
T COG0015 301 NL-VLWHERDLTDSSVERVILPDAFIAADGALNRLLNVLEGLEVNPE 346 (438)
T ss_pred Hh-HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCHH
Confidence 66 599999999998554 33333366666667777766654
No 3
>PRK09285 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=4e-75 Score=611.58 Aligned_cols=362 Identities=60% Similarity=0.939 Sum_probs=318.4
Q ss_pred cccccccCCCCCccCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCC---CCCCcHHHHHHHHHHHccCCccc
Q 013159 77 ELSSLTALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTE---VPSFSEEAKSYLQGLIDGFNMDD 153 (448)
Q Consensus 77 ~~~~~~~~sp~dgry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~gi---Ip~~~a~a~~~i~~~~~~~~~~d 153 (448)
+...++++|||++||.+.+++|+.+|||++++++|++||+||+++|+ ++|+ ||+.++++++.|.+.+.+|...|
T Consensus 2 ~~~~~~~~~p~~~ry~~~~~e~~~~~s~~~~~~~~l~vE~A~a~a~a---~~g~~~~ip~~~~~~~~~i~~~~~~~~~~d 78 (456)
T PRK09285 2 ELSALTALSPLDGRYASKTAALRPIFSEFGLIRYRVQVEVEWLIALA---AHPGIPEVPPFSAEANAFLRAIVENFSEED 78 (456)
T ss_pred CCccccCCCCCccccCCCCHHHHHHhCHHHHHHHHHHHHHHHHHHHH---hcCCCCCCCCCCHHHHHHHHHHHHhhCccc
Confidence 45579999999999998778999999999999999999999999999 7877 99999999666666554464458
Q ss_pred HHhHHHHHhhhCCcHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 013159 154 ALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKV-MFPVMDKLIKALCEI 232 (448)
Q Consensus 154 ~~~l~~~e~~t~hDv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~-l~~~L~~l~~aL~~l 232 (448)
+++++++++.++|||+++|++|++++|..+++.++++|||+|+|||||+||+++|++|+++. . +.+.|..++++|.++
T Consensus 79 ~~~i~~~e~~~~hdv~a~~~~l~~~~~~~~~~~~~~~~vH~G~Ts~Di~dTa~~L~lr~~l~-~~l~~~L~~l~~~L~~l 157 (456)
T PRK09285 79 AARIKEIERTTNHDVKAVEYFLKEKLAGLPELEAVSEFIHFACTSEDINNLSHALMLKEARE-EVLLPALRELIDALKEL 157 (456)
T ss_pred HHHHHHHHHHhCCChHHHHHHHHHHhcccCcchhHHhHccCCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999742222348999999999999999999999999998 5 899999999999999
Q ss_pred HHHcccceeeccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhHhhhcccccccccccccccCCCCChhhhHHHHHHHc
Q 013159 233 AKDNANISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSL 312 (448)
Q Consensus 233 A~~~~dt~m~gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~L 312 (448)
|++|++++|+||||+|||+|||||+|+++|+++|.|+++||.++.++|+++||+||++++...+|+.||+.+.+.+++.|
T Consensus 158 A~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~~~~g~~~GAvGt~~a~~~~~~~~~~~~v~~~~~~~L 237 (456)
T PRK09285 158 AHEYADVPMLSRTHGQPATPTTLGKEMANVAYRLERQLKQLEAVEILGKINGAVGNYNAHLAAYPEVDWHAFSREFVESL 237 (456)
T ss_pred HHHcCCCeeeceecCCCCeeehHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHhhhcCCccHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999976654557778999999999999
Q ss_pred CCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhh
Q 013159 313 GLSFNPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKA 392 (448)
Q Consensus 313 GL~~~~~~~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la 392 (448)
||..+++++|+.+||++++++++++.++++|+|||+||++|++.|++.+.++++++|||||||||||+.+|+++++.+.+
T Consensus 238 GL~~~~~~~~v~~rD~~~e~~~~la~~a~~L~kia~Di~ll~~~~e~~e~~~~~~~GSS~MPhKrNPv~~E~i~~~a~~~ 317 (456)
T PRK09285 238 GLTWNPYTTQIEPHDYIAELFDAVARFNTILIDLDRDVWGYISLGYFKQKTKAGEIGSSTMPHKVNPIDFENSEGNLGLA 317 (456)
T ss_pred CCCCCCCccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhccCCCCCCCCCCCCCCcCchHHHHHHHHHHHH
Confidence 99999987788999999999999999999999999999999998888777888999999999999999999999977766
Q ss_pred hHHHhhhhhhccccccccccccch--HHHHHhHH---HHHHHHhhcccccccccc
Q 013159 393 NEDLSFLSMKLPISRWQVRSNLTL--LLIFFNFD---LWLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 393 ~~v~g~la~~L~~s~~qRDl~~~~--~~~~~~~~---~~~~ll~~~~~~~~~~~~ 442 (448)
+...+.+...++.+++|||++.|. ..+++.+. .....+..+...++|++|
T Consensus 318 ~~~~~~~~~~~~~~~~eRD~~~~~~e~~~~~~~~~~~~~l~~~~~~l~~L~V~~~ 372 (456)
T PRK09285 318 NALLEHLAAKLPISRWQRDLTDSTVLRNLGVAFGYSLIAYDSLLKGLGKLEVNEA 372 (456)
T ss_pred HHHHHHHHhhccHHhhCCcCchhhhhcchHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 655565555564578999999874 22233333 377778888888888765
No 4
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2. This subgroup contains mainly eukaryotic proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). ASL deficiency has been linked to several pathologies including psychomotor retardation with autistic features, epilepsy and muscle wasting.
Probab=100.00 E-value=1.3e-70 Score=575.52 Aligned_cols=335 Identities=19% Similarity=0.184 Sum_probs=293.5
Q ss_pred CCccCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCC-CCCCcHHHHHHHHHHHccCCcccHHhHHHHHhhhC
Q 013159 87 LDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTE-VPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTN 165 (448)
Q Consensus 87 ~dgry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~gi-Ip~~~a~a~~~i~~~~~~~~~~d~~~l~~~e~~t~ 165 (448)
+||||.+ ++|+.+|||+++++.|++||.+++.+++ ++|+ ||+++++++ .+.+.+ .|++++++++++++
T Consensus 1 ~~~ry~~--~~~~~~fs~~~~~~~~l~~e~ala~a~~---~~g~~ip~~~a~~i---~~~~~~---~d~~~i~~~e~~~~ 69 (436)
T cd03302 1 LASRYAS--KEMVYIFSPRKKFSTWRKLWLWLAEAEK---ELGLDISDEQIEEM---KANVEN---IDFEIAAAEEKKLR 69 (436)
T ss_pred CCCCcCC--HHHHHHcChHHHHHHHHHHHHHHHHhhH---HhCCCCCHHHHHHH---HHhhhc---CCHHHHHHHHHHhC
Confidence 6899995 6999999999999999999999999999 8999 997555555 443323 38999999999999
Q ss_pred CcHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccc
Q 013159 166 HDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRT 245 (448)
Q Consensus 166 hDv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRT 245 (448)
|||++++++|++++|+ +++|||+|+|||||+||+++|++|+++. .+.+.|.+++++|.++|.+|++++|+|||
T Consensus 70 hdv~a~~~~l~~~~~~------~~~~vH~G~TS~Di~dta~~L~lr~a~~-~l~~~L~~l~~~L~~~A~~~~dt~m~GrT 142 (436)
T cd03302 70 HDVMAHVHAFGLLCPA------AAGIIHLGATSCFVTDNTDLIQIRDALD-LILPKLAAVIDRLAEFALEYKDLPTLGFT 142 (436)
T ss_pred cCchHHHHHHHHHhHh------ccCeeeeCcCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCeeeccc
Confidence 9999999999999975 8999999999999999999999999998 59999999999999999999999999999
Q ss_pred cCCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCC--hhhhHHHHHHHcCCCCC-CC
Q 013159 246 HGQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVN--WPQITEDFVKSLGLSFN-PY 319 (448)
Q Consensus 246 H~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d--~~~v~~~la~~LGL~~~-~~ 319 (448)
|+|||+|||||||+++|+++|.|+++||.++. ..++++|+|||+++++..+|+.. |+.+.+++++.|||..+ +.
T Consensus 143 H~Q~A~P~TfG~~~a~~~~~L~r~~~RL~~~~~~~~~~~~~GavGt~a~~~~~~~~dr~~~~~v~~~~a~~LGl~~~~~~ 222 (436)
T cd03302 143 HYQPAQLTTVGKRACLWIQDLLMDLRNLERLRDDLRFRGVKGTTGTQASFLDLFEGDHDKVEALDELVTKKAGFKKVYPV 222 (436)
T ss_pred cCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcChhhhhHHHHhcCCchHHHHHHHHHHHHHHcCCCCCCCc
Confidence 99999999999999999999999999999996 45667899999988877776432 56788899999999987 66
Q ss_pred CccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhh
Q 013159 320 VTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFL 399 (448)
Q Consensus 320 ~~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~l 399 (448)
.+|+.+||+++++++++++++++|+|||+|+++|+++|++.+++..+++||||||||+||+.+|++++ +|+.+.|++
T Consensus 223 ~~~v~~rD~~~e~~~~la~~a~~L~riA~Dl~l~~s~~el~e~~~~g~~GSS~MPhKrNPv~~E~i~~---~a~~~~g~~ 299 (436)
T cd03302 223 TGQTYSRKVDIDVLNALSSLGATAHKIATDIRLLANLKEVEEPFEKGQIGSSAMPYKRNPMRSERCCS---LARHLMNLA 299 (436)
T ss_pred hhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCceecccccCCCCCcccCCCccCcHHHHHHHH---HHHHHHhhH
Confidence 66889999999999999999999999999999999999988866678999999999999999999887 566899988
Q ss_pred hhhc---cccccccccccchHHH---HHhHHH---HHHHHhhcccccccccc
Q 013159 400 SMKL---PISRWQVRSNLTLLLI---FFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 400 a~~L---~~s~~qRDl~~~~~~~---~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
+..+ ..+++|||+..+.... .+.+.. ....+..+...++|++|
T Consensus 300 ~~~~~~~~~~~~Erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~ 351 (436)
T cd03302 300 SNAAQTASTQWFERTLDDSANRRIAIPEAFLAADAILITLQNISEGLVVYPK 351 (436)
T ss_pred HHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHH
Confidence 6665 3567899999876542 233333 66677777788888765
No 5
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL). This subgroup contains EcASL, the product of the purB gene in Escherichia coli, and related proteins. It is a member of the Lyase class I family of the Lyase_I superfamily. Members of the Lyase class I family function as homotetramers to catalyze similar beta-elimination reactions in which a Calpha-N or Calpha-O bond is cleaved with the subsequent release of fumarate as one of the products. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two non-sequential steps in the de novo purine biosynthesis pathway: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=2.6e-70 Score=570.17 Aligned_cols=342 Identities=56% Similarity=0.912 Sum_probs=297.5
Q ss_pred hHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCC---CcHHHHHHHHHHHccCCcccHHhHHHHHhhhCCcHhHHHHH
Q 013159 98 LAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPS---FSEEAKSYLQGLIDGFNMDDALEVKNIERVTNHDVKAVEYF 174 (448)
Q Consensus 98 l~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~---~~a~a~~~i~~~~~~~~~~d~~~l~~~e~~t~hDv~a~e~~ 174 (448)
++++|||++++++|++||.||+++|+ ++|+||+ .+.++.+.|.+.++.++..|+++++++++.++|||+++|++
T Consensus 1 ~~~~~s~~~~~~~~l~vE~ala~a~a---~~g~Ip~~~~~~~~aa~~i~~~~~~~~~~d~~~~~~~~~~~~hdv~al~~~ 77 (425)
T cd01598 1 LRPYFSEYALIKYRVQVEVEWLIALS---NLEEIPEVPPLTKEELKFLRAIIENFSEEDALRIKEIEATTNHDVKAVEYF 77 (425)
T ss_pred CHHHhCHHHHHHHHHHHHHHHHHHHH---hcCCCCCCCCCCHHHHHHHHHHHhhcCccCHHHHHHHHHHHCCCcHHHHHH
Confidence 46899999999999999999999999 8999998 33444444555555555348999999999999999999999
Q ss_pred HHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccccCCCCcccc
Q 013159 175 LKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTT 254 (448)
Q Consensus 175 L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~Q~A~PtT 254 (448)
|++++|..+.+.++++|||+|+|||||+||+++|++|+++..++.+.|.+++++|.++|.+|++|+|+||||+|||+|||
T Consensus 78 l~~~~g~~~~~~~~~~~vH~G~TsnDi~dTa~~L~lr~~l~~~l~~~L~~l~~~L~~lA~~~~dt~m~GrTH~Q~A~P~T 157 (425)
T cd01598 78 LKEKFETLGLLKKIKEFIHFACTSEDINNLAYALMIKEARNEVILPLLKEIIDSLKKLAKEYADVPMLSRTHGQPATPTT 157 (425)
T ss_pred HHHHhcccccchhhhhHhccCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeecccCCccCeehh
Confidence 99999852111247899999999999999999999999994457899999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhHhhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCCCCccccchhHHHHHHH
Q 013159 255 LGKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQIETHDYMAKLFY 334 (448)
Q Consensus 255 fG~~la~~~~~L~r~~~rL~~~~~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~qi~~rD~~ael~~ 334 (448)
||+|+++|+++|.|+++||.++.++|+++||+||++++..++++.+|..+++.+++.|||..++..+|+.+||+++++++
T Consensus 158 fG~~~a~w~~~L~r~~~RL~~~~~~g~~gGavGt~~~~~~~~~~~~~~~~~~~~a~~LgL~~~~~~~~v~~rD~~~e~~~ 237 (425)
T cd01598 158 LGKELAVFVYRLERQYKQLKQIEILGKFNGAVGNFNAHLVAYPDVDWRKFSEFFVTSLGLTWNPYTTQIEPHDYIAELFD 237 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhheeeCchhhhhhhhhccCcccHHHHHHHHHHHhCcCCCCcccchhccHHHHHHHH
Confidence 99999999999999999999999999999999999887655565567789999999999999887767899999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhhhcccccccccccc
Q 013159 335 AFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSMKLPISRWQVRSNL 414 (448)
Q Consensus 335 ~la~i~~~L~kia~Di~l~~s~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~~L~~s~~qRDl~~ 414 (448)
+++.++++|+|||+|+++|++.|++.+.++++++|||||||||||+.+|++++++.+++.+.+.+...++.+++|||++.
T Consensus 238 ~La~la~~L~kia~Di~ll~s~ge~~e~~~~~~~GSS~MPhKrNPv~~E~i~~~a~~a~~~~~~~~~~~~~~~~eRD~~~ 317 (425)
T cd01598 238 ALARINTILIDLCRDIWGYISLGYFKQKVKKGEVGSSTMPHKVNPIDFENAEGNLGLSNALLNHLSAKLPISRLQRDLTD 317 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcceeecCCCCCCCcCCCCCCcCchHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccccc
Confidence 99999999999999999999888888778889999999999999999999999888777888777766656889999998
Q ss_pred ch--HHHHHhHH---HHHHHHhhcccccccccc
Q 013159 415 TL--LLIFFNFD---LWLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 415 ~~--~~~~~~~~---~~~~ll~~~~~~~~~~~~ 442 (448)
|. ..+.+.+. .....+..+...++|++|
T Consensus 318 ~~~e~~~~~~~~~~~~al~~~~~ll~~L~v~~~ 350 (425)
T cd01598 318 STVLRNIGVAFGHSLIAYKSLLRGLDKLELNEA 350 (425)
T ss_pred hhhhccHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 74 22233333 377788888888888775
No 6
>PRK07380 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.4e-69 Score=566.42 Aligned_cols=325 Identities=22% Similarity=0.301 Sum_probs=284.2
Q ss_pred CCccCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHHHHHhhhCC
Q 013159 87 LDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNH 166 (448)
Q Consensus 87 ~dgry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~~~e~~t~h 166 (448)
++ ||+ +++|+.+|||++++++|++||++|+++|+ ++|+||+++++++ .+.. +| |+++++++++.++|
T Consensus 2 ~~-~y~--~~~~~~~fs~~~~~~~~l~vE~ala~a~~---~~g~ip~~aa~~i---~~~~-~~---d~~~i~~~~~~~~h 68 (431)
T PRK07380 2 IE-RYT--LPEMGNIWTDTAKFQTWLDVEIAVCEAQA---ELGKIPQEAVEEI---KAKA-NF---DPQRILEIEAEVRH 68 (431)
T ss_pred cc-ccC--cHHHHHHcCHHHHHHHHHHHHHHHHHHHH---HcCCCCHHHHHHH---Hhcc-CC---CHHHHHHHHHHhCC
Confidence 45 998 47999999999999999999999999999 8999997555554 4432 34 79999999999999
Q ss_pred cHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeecccc
Q 013159 167 DVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTH 246 (448)
Q Consensus 167 Dv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH 246 (448)
||+++++.|++++|+ +++|||+|+|||||+||+++|++|+++. .+.+.|.+++++|.++|.+|++|+|+||||
T Consensus 69 ~v~a~v~~l~~~~g~------~~~~vH~G~Ts~Di~dTa~~L~lr~~l~-~l~~~l~~l~~~L~~lA~~~~~t~m~grTH 141 (431)
T PRK07380 69 DVIAFLTNVNEYVGD------AGRYIHLGMTSSDVLDTGLALQLVASLD-LLLEELEDLIQAIRYQAREHRNTVMIGRSH 141 (431)
T ss_pred ChHHHHHHHHHHHHH------hhccccCCCChhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCeeechhc
Confidence 999999999999975 8999999999999999999999999998 599999999999999999999999999999
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCCCCccc
Q 013159 247 GQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQI 323 (448)
Q Consensus 247 ~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~qi 323 (448)
+|||+|||||+|+++|+++|.|+++||.++. ..++++||+||+++. | +++.+.+++.|||..++.++|+
T Consensus 142 ~Q~A~P~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~~l~GAvGt~~~~-------~-~~~~~~~a~~LGl~~~~~~~~v 213 (431)
T PRK07380 142 GIHAEPITFGFKLAGWLAETLRNRERLVRLREDIAVGQISGAVGTYANT-------D-PRVEAITCQKLGLKPDTASTQV 213 (431)
T ss_pred CccceechHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhcCcccC-------C-hhHHHHHHHHcCCCCCCCCCCc
Confidence 9999999999999999999999999999996 678889999997543 2 3577899999999988766688
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccee--eecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhh
Q 013159 324 ETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFK--QVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSM 401 (448)
Q Consensus 324 ~~rD~~ael~~~la~i~~~L~kia~Di~l~~s~g~~~--~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~ 401 (448)
.+||++++++++++.++++|+|||+|+++|+++|+.+ +.+..+++|||||||||||+.+|++++ +|+.+.|.++.
T Consensus 214 ~~rd~~~e~~~~la~~a~~L~kia~Di~~l~~~~~~el~e~~~~g~~GSS~MPhKrNP~~~E~i~~---~a~~~~g~~~~ 290 (431)
T PRK07380 214 ISRDRHAEYVQTLALVGASLERFATEIRNLQRTDVLEVEEYFAKGQKGSSAMPHKRNPIRSERLSG---LARVLRSYAVA 290 (431)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCceeecccCCCCCCCCcCCCCCCCCHHHHHHHH---HHHHHHHHHHH
Confidence 9999999999999999999999999999998755444 455567899999999999999999887 55688888765
Q ss_pred hcc--ccccccccccchH---HHHHhHHH---HHHHHhhcccccccccc
Q 013159 402 KLP--ISRWQVRSNLTLL---LIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 402 ~L~--~s~~qRDl~~~~~---~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
.+. .++||||+++|.. .+++.+.. ....+..+...++|++|
T Consensus 291 ~~~~~~~~~eRD~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~L~v~~~ 339 (431)
T PRK07380 291 ALENVALWHERDISHSSVERVMLPDCSILLHFMLREMTDLVKNLLVYPE 339 (431)
T ss_pred HHHhchhhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 542 4888999998653 44555443 77788888889988875
No 7
>PRK08540 adenylosuccinate lyase; Reviewed
Probab=100.00 E-value=2.6e-69 Score=567.83 Aligned_cols=338 Identities=26% Similarity=0.306 Sum_probs=291.8
Q ss_pred ccCCCCCccCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHHHHH
Q 013159 82 TALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIE 161 (448)
Q Consensus 82 ~~~sp~dgry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~~~e 161 (448)
|+|||+++||+ +++|+.+|||++++++|++||+||+++|+ ++|+||+..+++ |.+.+.. ...|.+.+++++
T Consensus 1 ~~~~~~~~~~~--~~~~~~~~s~~~~~~~~l~ve~A~a~~l~---~~Giip~~~a~~---I~~~l~~-~~i~~~~~~~~~ 71 (449)
T PRK08540 1 MAIHPIDYRYG--TPEMKRVWSEENKLQKMLDVEAALARAEA---ELGLIPEEAAEE---INRKAST-KYVKLERVKEIE 71 (449)
T ss_pred CCcCCcCcccC--CHHHHHHcChHHHHHHHHHHHHHHHHHHH---HcCCCCHHHHHH---HHHhccc-ccCCHHHHHHHH
Confidence 68999999999 48999999999999999999999999999 899999754444 4444433 103677778888
Q ss_pred hhhCCcHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccee
Q 013159 162 RVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISM 241 (448)
Q Consensus 162 ~~t~hDv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m 241 (448)
..++|||+++|++|++++|. +.++|||+|+|||||++|+++|++|+++. .+.+.|..++++|.++|++|++++|
T Consensus 72 ~~~~~~v~~~e~~L~~~~~~-----~~~~~vH~g~S~nDi~~Ta~~L~lr~~l~-~l~~~L~~l~~~L~~~A~~~~~~~m 145 (449)
T PRK08540 72 AEIHHDIMAVVKALSEVCEG-----DAGEYVHFGATSNDIIDTATALQLKDSLE-ILEEKLKKLRGVLLKKAEEHKNTVC 145 (449)
T ss_pred HHhCCCcHHHHHHHHHHhhh-----hhhcceecCccHhhHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCch
Confidence 89999999999999999963 38999999999999999999999999998 4999999999999999999999999
Q ss_pred eccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCC
Q 013159 242 LSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNP 318 (448)
Q Consensus 242 ~gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~ 318 (448)
+||||+|||||||||||+++|++.|.|+++||.++. ..+++||||||.+++ ++..|+ +.+++++.|||+.++
T Consensus 146 ~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgavGt~~a~----~~~~~~-i~~~~a~~LGl~~~~ 220 (449)
T PRK08540 146 IGRTHGQHAVPTTYGMRFAIWASEIQRHLERLEQLKPRVCVGQMTGAVGTQAAF----GEKGIE-IQKRVMEILGLKPVL 220 (449)
T ss_pred hhhcCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHhhheccccccccchhhC----CCccHH-HHHHHHHHcCCCCCC
Confidence 999999999999999999999999999999999986 678889999997654 444444 778999999999987
Q ss_pred CCccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHH
Q 013159 319 YVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDL 396 (448)
Q Consensus 319 ~~~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~ 396 (448)
.++++++||++++++++++.++++|+|||+|+++|++ +|++.+.++++++||||||||+||+.+|+++++ |+.+.
T Consensus 221 ~~~~~~~rd~~~e~~~~l~~~a~~l~kia~Dl~l~s~~e~gei~e~~~~~~~GSSiMP~K~NP~~~E~i~~~---a~~~~ 297 (449)
T PRK08540 221 ISNQVIQRDRHAEFMMFLANIATTLDKIGLEIRNLQRTEIGEVEEEFGKKQVGSSTMPHKRNPITSEQICGL---ARVVR 297 (449)
T ss_pred CcCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCcCCCCCCcCcHHHHHHHHH---HHHHH
Confidence 7678899999999999999999999999999999875 777766567889999999999999999999985 55888
Q ss_pred hhhhhhcc--ccccccccccch---HHHHHhHHH---HHHHHhhcccccccccc
Q 013159 397 SFLSMKLP--ISRWQVRSNLTL---LLIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 397 g~la~~L~--~s~~qRDl~~~~---~~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
|.+...+. .+.++||+++++ ..+.+++.. ...++..+...++|++|
T Consensus 298 g~~~~~~~~~~~~~~rd~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~ 351 (449)
T PRK08540 298 SNVEPALLNNPLWDERDLTNSSCERIIFPESCVLTDHILKLMIKVLEGLRFNPE 351 (449)
T ss_pred HHHHHHHhcchhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 87654442 578999999985 233323333 67788888999998876
No 8
>PRK07492 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=7.2e-69 Score=561.77 Aligned_cols=329 Identities=22% Similarity=0.251 Sum_probs=285.9
Q ss_pred CCccCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHHHHHhhhCC
Q 013159 87 LDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNH 166 (448)
Q Consensus 87 ~dgry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~~~e~~t~h 166 (448)
++.||+ +++|+.+|||+++++.|++||.|++++|+ ++|+||++++++| .+.+.... .|+++++++++.++|
T Consensus 1 ~~~~y~--~~~~~~i~s~~~~~~~~l~vE~ala~a~~---~~g~ip~~aa~~i---~~~~~~~~-~d~~~~~~~~~~~~h 71 (435)
T PRK07492 1 MIPRYS--RPEMVAIWEPETKFRIWFEIEAHACEAQA---ELGVIPKEAAETI---WEKGKDAE-FDVARIDEIEAVTKH 71 (435)
T ss_pred CCcccC--cHHHHHHcCHHHHHHHHHHHHHHHHHHHH---HcCCCCHHHHHHH---HHhCcccC-CCHHHHHHHHHHhCC
Confidence 356898 47999999999999999999999999999 8999997666655 44332222 489999999999999
Q ss_pred cHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeecccc
Q 013159 167 DVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTH 246 (448)
Q Consensus 167 Dv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH 246 (448)
||+++|++|++++|+ .++|||+|+|||||+||+++|++|+++. .+.+.|.+++++|.++|++|++|+|+||||
T Consensus 72 ~v~a~~~~L~~~~g~------~~~~vH~G~Ts~Di~dTa~~L~lr~~~~-~l~~~l~~l~~~L~~~A~~~~~t~m~grTH 144 (435)
T PRK07492 72 DVIAFLTHLAEFVGP------DARFVHQGMTSSDVLDTCLNVQLVRAAD-LLLADLDRVLAALKKRAFEHKDTPTIGRSH 144 (435)
T ss_pred ChHHHHHHHHHHhhH------hhhhhcCCCChhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEEeeccC
Confidence 999999999999975 6999999999999999999999999998 599999999999999999999999999999
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCCCCccc
Q 013159 247 GQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQI 323 (448)
Q Consensus 247 ~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~qi 323 (448)
+|||+|||||+|+++|+++|.|+++||.++. ..+++|||+||+... | +.+.++++++|||+.++.++|+
T Consensus 145 ~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~~~~~~~~~lgGAvGT~~~~-------~-~~~~~~~a~~LGl~~~~~~~~v 216 (435)
T PRK07492 145 GIHAEPTTFGLKLARFYAEFARNRERLVAAREEIATCAISGAVGTFANI-------D-PRVEEHVAKKLGLKPEPVSTQV 216 (435)
T ss_pred CccceehhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccCCccC-------C-hHHHHHHHHHhCCCCCCccccc
Confidence 9999999999999999999999999999996 678899999996432 3 4578999999999998887788
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhh
Q 013159 324 ETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSM 401 (448)
Q Consensus 324 ~~rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~ 401 (448)
.+||++++++++++.++++|+|||+|+++|++ +|++.+.+.+|++||||||||+||+.+|++++ +|+.+.|.+..
T Consensus 217 ~~RD~~~e~~~~la~~~~~L~ria~Di~~l~~~e~~El~e~~~~g~~GSS~MPhKrNP~~~E~i~~---~a~~~~~~~~~ 293 (435)
T PRK07492 217 IPRDRHAMFFATLGVIASSIERLAIEIRHLQRTEVLEAEEFFSPGQKGSSAMPHKRNPVLTENLTG---LARLVRSYVVP 293 (435)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhccccCCCCCCCCCCCCCCCcHHHHHHHH---HHHHHHHHHHH
Confidence 99999999999999999999999999998874 77777767788999999999999999999988 55577776644
Q ss_pred hcc--ccccccccccchHH---HHHh---HHHHHHHHhhcccccccccc
Q 013159 402 KLP--ISRWQVRSNLTLLL---IFFN---FDLWLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 402 ~L~--~s~~qRDl~~~~~~---~~~~---~~~~~~ll~~~~~~~~~~~~ 442 (448)
.+. .++||||++.+... +.+. ....+..+..+...++|++|
T Consensus 294 ~~~~~~~~~eRD~~~~~~e~~~lp~~~~~~~~~l~~~~~~l~~L~v~~~ 342 (435)
T PRK07492 294 AMENVALWHERDISHSSVERMIGPDATITLDFALNRLAGVIEKLVVYPE 342 (435)
T ss_pred HHHhcchhhccCChHHHHhhhHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 432 48899999976433 2233 33377788888999998875
No 9
>PRK08470 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.2e-68 Score=561.53 Aligned_cols=325 Identities=22% Similarity=0.259 Sum_probs=283.7
Q ss_pred CCccCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHHHHHhhhCC
Q 013159 87 LDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNH 166 (448)
Q Consensus 87 ~dgry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~~~e~~t~h 166 (448)
++ ||. +++|+.+|||++++++|++||+||+++|+ ++|+||++++++ |.+.++ .|+++++++++.++|
T Consensus 2 ~~-~y~--~~~~~~i~s~~~~~~~~l~ve~A~a~al~---~~G~Ip~~~a~~---I~~~~~----~d~~~~~~~~~~~~~ 68 (442)
T PRK08470 2 VE-RYA--REEMKKKWTMQAKYDAWLEVEKAAVKAWN---KLGLIPDSDCEK---ICKNAK----FDIARIDEIEKTTKH 68 (442)
T ss_pred Cc-ccC--cHHHHHHcCHHHHHHHHHHHHHHHHHHHH---HcCCCCHHHHHH---HHHhcc----cchHHHHHHHHccCC
Confidence 45 898 47999999999999999999999999999 899999755554 444332 267888999999999
Q ss_pred cHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeecccc
Q 013159 167 DVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTH 246 (448)
Q Consensus 167 Dv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH 246 (448)
||++++++|++++|+ .++|||+|+|||||+||+++|++|+++. .+.+.|.+++++|.++|.+|++|+|+||||
T Consensus 69 dv~~~v~~L~e~~g~------~~~~vH~G~TsnDi~dTa~~L~lr~~l~-~l~~~l~~l~~~L~~lA~~~~~t~m~grTH 141 (442)
T PRK08470 69 DLIAFLTSVSESLGE------ESRFVHYGMTSSDCIDTAVALQMRDSLK-LIIEDVKNLMEAIKKRALEHKDTLMVGRSH 141 (442)
T ss_pred ChHHHHHHHHHHccc------cccceecCCChhchHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCeeecccC
Confidence 999999999999975 6899999999999999999999999998 599999999999999999999999999999
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCCCCccc
Q 013159 247 GQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQI 323 (448)
Q Consensus 247 ~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~qi 323 (448)
+|||+|||||+|+++|+++|.|+++||.+++ .++++||||||+++. | ..++++++++|||+.++..||+
T Consensus 142 ~Q~A~P~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~~lgGAvGt~a~~----~----~~v~~~~a~~LGl~~~~~~~~v 213 (442)
T PRK08470 142 GIHGEPITFGLVLAIWYDEIKRHLKALEHTMEVISVGKISGAMGNFAHA----P----LELEELVCEELGLKPAPVSNQV 213 (442)
T ss_pred CCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcchhcccccC----C----hHHHHHHHHHcCCCCCCCCCCc
Confidence 9999999999999999999999999999996 788999999997543 2 2478999999999987776788
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhh
Q 013159 324 ETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSM 401 (448)
Q Consensus 324 ~~rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~ 401 (448)
.+||++++++++++.++++|+|||+||++|++ +|++.+.+.++++|||||||||||+.+|+++++ |+.+.|.+..
T Consensus 214 ~~RD~~~e~~~~La~~a~~L~ria~Di~~l~~~E~~ev~e~~~~g~~GSS~MPhKrNPv~~E~i~~~---a~~~~~~~~~ 290 (442)
T PRK08470 214 IQRDRYARLASALALLASSCEKIAVAIRHLQRTEVYEAEEYFSKGQKGSSAMPHKRNPVLSENITGL---CRVIRSFATP 290 (442)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceecccCCCCCCCcCCCCCCcCcHHHHHHHHH---HHHHHHHHHH
Confidence 99999999999999999999999999988875 777777777888999999999999999999985 4577776543
Q ss_pred hc--cccccccccccchH---HHHHhHHH---HHHHHhhcccccccccc
Q 013159 402 KL--PISRWQVRSNLTLL---LIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 402 ~L--~~s~~qRDl~~~~~---~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
.+ ..++||||++.|.. .+++++.. .+..+..+...++|++|
T Consensus 291 ~~~~~~~~~eRD~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~ 339 (442)
T PRK08470 291 ALENVALWHERDISHSSVERFILPDAFITTDFMLHRLNNVIENLVVYPE 339 (442)
T ss_pred HHHhchHhhccCCchhHHHhhhHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 33 24789999998652 23555554 77788899999999876
No 10
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like. This group contains ASL, prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. These proteins are members of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). pCMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone, in the beta-ketoadipate pathway. ASL deficiency has been linked t
Probab=100.00 E-value=1.7e-68 Score=551.07 Aligned_cols=324 Identities=32% Similarity=0.427 Sum_probs=285.4
Q ss_pred hHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHHHHHhhhCCcHhHHHHHHHH
Q 013159 98 LAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNHDVKAVEYFLKQ 177 (448)
Q Consensus 98 l~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~~~e~~t~hDv~a~e~~L~~ 177 (448)
|+.+|||++++++|++||+||+++|+ +.|+||++++++ |.+.++.+. .|++++++.+..++|||+++|++|++
T Consensus 1 ~~~~~s~~~~~~~~l~ve~A~a~~l~---~~giip~~~a~~---i~~~l~~~~-~d~~~~~~~~~~~~~~v~~~e~~L~~ 73 (381)
T cd01595 1 MRAIFSEENKLRTWLDVEAALAEAQA---ELGLIPKEAAEE---IRAAADVFE-IDAERIAEIEKETGHDVIAFVYALAE 73 (381)
T ss_pred ChhHhChHHHHHHHHHHHHHHHHHHH---HcCCCCHHHHHH---HHHhhhccc-CCHHHHHHHHHHhCcCcHHHHHHHHH
Confidence 57899999999999999999999999 899999654444 555555553 47888989999999999999999999
Q ss_pred HhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccccCCCCcccchhh
Q 013159 178 KCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTTLGK 257 (448)
Q Consensus 178 ~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~Q~A~PtTfG~ 257 (448)
++|+ ++++|+|+|+|||||++|+++|++|+++. .+.+.+.+++++|.++|++|+|++|+||||+||||||||||
T Consensus 74 ~~g~-----~~~~~vH~g~S~nDi~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~A~~~~dt~m~grTH~Q~A~P~T~G~ 147 (381)
T cd01595 74 KCGE-----DAGEYVHFGATSQDINDTALALQLRDALD-IILPDLDALIDALAKLALEHKDTPMLGRTHGQHALPTTFGK 147 (381)
T ss_pred Hhhh-----HhhhHeecCcCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCChHHhhcCCCCCcchhHHH
Confidence 9985 37999999999999999999999999999 59999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCCCCccccchhHHHHHHH
Q 013159 258 EISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQIETHDYMAKLFY 334 (448)
Q Consensus 258 ~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~qi~~rD~~ael~~ 334 (448)
|+++|+++|.|+++||.++. ..+++|||+||.++.+ . +|+.+++++++.|||..+++.+++.+||+++++++
T Consensus 148 ~~~~~~~~L~r~~~rL~~~~~~~~~~~lGga~G~g~~~~----~-~~~~~~~~~a~~LGl~~~~~~~~~~~rd~~~e~~~ 222 (381)
T cd01595 148 KFAVWAAELLRHLERLEEARERVLVGGISGAVGTHASLG----P-KGPEVEERVAEKLGLKVPPITTQIEPRDRIAELLS 222 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhcccHhhhHhhcC----C-cHHHHHHHHHHHcCCCCCCCCCCcccchHHHHHHH
Confidence 99999999999999999996 5677889999965542 2 56788999999999988887777779999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhhhcc--cccccc
Q 013159 335 AFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSMKLP--ISRWQV 410 (448)
Q Consensus 335 ~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~~L~--~s~~qR 410 (448)
+++.++++|+|||+|+++|++ +|++.++..++++||||||||+||+.+|+++++++ .+.|.+...+. .++|||
T Consensus 223 ~l~~~~~~l~ria~Dl~~~~s~e~gev~~~~~~~~~GSS~MPqK~NP~~~E~i~~~a~---~~~g~~~~~~~~~~~~~er 299 (381)
T cd01595 223 ALALIAGTLEKIATDIRLLQRTEIGEVEEPFEKGQVGSSTMPHKRNPIDSENIEGLAR---LVRALAAPALENLVQWHER 299 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccceeccccCCCCCCccCCCcCCcHHHHHHHHHHH---HHHHHHHHHHHhhhHhhcc
Confidence 999999999999999999987 99998855578999999999999999999998555 77776643332 588999
Q ss_pred ccccch---HHHHHhHHH---HHHHHhhcccccccccc
Q 013159 411 RSNLTL---LLIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 411 Dl~~~~---~~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
|+++++ ..+++.+.. ...++..+...++|++|
T Consensus 300 d~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~ 337 (381)
T cd01595 300 DLSDSSVERNILPDAFLLLDAALSRLQGLLEGLVVNPE 337 (381)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHH
Confidence 999988 666666666 66788888888888876
No 11
>PRK06390 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=3.2e-68 Score=559.65 Aligned_cols=337 Identities=23% Similarity=0.280 Sum_probs=291.6
Q ss_pred ccCCCCCccCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHHHHH
Q 013159 82 TALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIE 161 (448)
Q Consensus 82 ~~~sp~dgry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~~~e 161 (448)
|-+||+++||.+ ++|+.+|||++++++|++||+||+++|+ ++|+||+++++++ .+.+.... .|++++++.+
T Consensus 1 ~~~~~~~~~y~~--~~~~~i~s~~~~~~~~l~ve~A~a~al~---~~Giip~~~a~~I---~~~l~~~~-~d~~~~~~~~ 71 (451)
T PRK06390 1 MVVSPIEYRYGR--DQVKYIFDDENRLRYMLKVEAAIAKAEY---EYGIIPRDAFLDI---KNAVDSNS-VRLERVREIE 71 (451)
T ss_pred CCCCCcCcccCC--HHHHHHcCHHHHHHHHHHHHHHHHHHHH---HcCCCCHHHHHHH---HHhccccc-CCHHHHHHHH
Confidence 457999999995 6999999999999999999999999999 8999997555554 44444332 3788888889
Q ss_pred hhhCCcHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccee
Q 013159 162 RVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISM 241 (448)
Q Consensus 162 ~~t~hDv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m 241 (448)
.+++|||+++|++|+++||+ +++|+|+|+|||||++|+++|++|+++. .+.+.|..++++|.++|.+|++|+|
T Consensus 72 ~~~~~dv~~~~~~L~~~~g~------~~~~iH~G~SsnDi~~Ta~~L~lr~~l~-~l~~~l~~l~~~L~~lA~~~~~t~m 144 (451)
T PRK06390 72 SEIKHDVMALVEALSEQCSA------GKNYVHFGVTSNDINDTATALQIHDFVS-IIKDDIKNLMETLIKLIDEYKDSPM 144 (451)
T ss_pred HHhCCCcHHHHHHHHHHhhh------hhhheecCccHhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCch
Confidence 99999999999999999974 7999999999999999999999999998 5999999999999999999999999
Q ss_pred eccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCC
Q 013159 242 LSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNP 318 (448)
Q Consensus 242 ~gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~ 318 (448)
+||||+|||+|||||||+++|++.|.|+++||.++. ..++++|++||.++.+ .+|+.+++++++.|||+.+.
T Consensus 145 ~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~r~~~~~~~gavGt~a~~g-----~~~~~~~~~~a~~LGl~~~~ 219 (451)
T PRK06390 145 MGRTHGQHASPITFGLKFAVYLDEMSRHLDRLTEMGDRAFAGKVLGPVGTGAALG-----KDALDIQNRVMEILGIYSEI 219 (451)
T ss_pred hhhhCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhcChhhCC-----CcHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999999999999999999996 5788899999976553 23677899999999999976
Q ss_pred CCccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeec-CCCCcccCCCCCCcCchHHHHhhhhhhhhhHH
Q 013159 319 YVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVT-KAGEIGSSTMPHKVNPIDFENSEGNLGKANED 395 (448)
Q Consensus 319 ~~~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~-~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v 395 (448)
..+++.+||++++++++++.++++|+|||+||++|++ +|++.+.. +++++||||||||+||+.+|+++++ +..+
T Consensus 220 ~~~~~~~rD~~~e~~~~l~~la~~l~kia~Di~l~ss~e~g~v~E~~~~~~~~GSSiMP~KrNPv~~E~i~~~---a~~~ 296 (451)
T PRK06390 220 GSTQIVNRDRYIEYLSVINGISVTLEKIATEIRNLQRPEIDEVSEYFDEESQVGSSSMPSKVNPINSENVVSL---SRFI 296 (451)
T ss_pred CccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCCCCCccCCCCCCCcHHHHHHHHH---HHHH
Confidence 6668899999999999999999999999999999986 88886545 4589999999999999999999874 4455
Q ss_pred Hhhhhhh--ccccccccccccch------HHHHHhHHHHHHHHhhcccccccccc
Q 013159 396 LSFLSMK--LPISRWQVRSNLTL------LLIFFNFDLWLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 396 ~g~la~~--L~~s~~qRDl~~~~------~~~~~~~~~~~~ll~~~~~~~~~~~~ 442 (448)
.+..+.. ..++.++||+++++ +..+..+.....++..++..++|++|
T Consensus 297 ~~l~~~~~~~~~~~~erd~~~~~~e~~~~~~~~~~~~~~l~~~~~~l~~l~v~~~ 351 (451)
T PRK06390 297 RSLIIPEYEAGVTWHERDLTNSALERFTIPYASILIDYVLYNMNDVLSHLIIKED 351 (451)
T ss_pred HHhHHHHHHhhhHhhccCCcchHHHHhhHHHHHHHHHHHHHHHHHHHcCCEECHH
Confidence 5444322 23566999999986 44455566677888888889998876
No 12
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1. This subgroup contains bacterial and archeal proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=1.1e-67 Score=546.18 Aligned_cols=323 Identities=26% Similarity=0.323 Sum_probs=282.0
Q ss_pred cCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHHHHHhhhCCcHh
Q 013159 90 RYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNHDVK 169 (448)
Q Consensus 90 ry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~~~e~~t~hDv~ 169 (448)
||+ +++|+.+|||++++++|++||+||+++|+ +.|+||++++++ |.+.++ . |.+++++.+..++||++
T Consensus 1 ~~~--~~~~~~~fs~~~~~~~~l~ve~A~a~~l~---~~Glip~~~a~~---I~~~l~-~---~~~~~~~~~~~~~~dv~ 68 (387)
T cd01360 1 RYG--RPEMKKIWSEENKFRKWLEVEAAVCEAWA---KLGVIPAEAAEE---IRKKAK-F---DVERVKEIEAETKHDVI 68 (387)
T ss_pred CCC--chHHHHHhCHHHHHHHHHHHHHHHHHHHH---HcCCCCHHHHHH---HHHHhh-c---CHHHHHHHHHHhCCChH
Confidence 566 57999999999999999999999999999 899999755555 444443 2 56777888889999999
Q ss_pred HHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccccCCC
Q 013159 170 AVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQP 249 (448)
Q Consensus 170 a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~Q~ 249 (448)
++|++|++++|+ .++|||+|+|||||++|+++|++|+++. .+.+.|.+++++|.++|++|++++||||||+||
T Consensus 69 ~~e~~L~~~~g~------~~~~lH~G~S~nDi~~ta~~L~lr~~l~-~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~ 141 (387)
T cd01360 69 AFVTAIAEYCGE------AGRYIHFGLTSSDVVDTALALQLREALD-IILKDLKELLEVLKKKALEHKDTVMVGRTHGIH 141 (387)
T ss_pred HHHHHHHHHHHH------hhhheeCCCChhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCeeehhhcCCc
Confidence 999999999985 7999999999999999999999999998 499999999999999999999999999999999
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCCCCccccch
Q 013159 250 ASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQIETH 326 (448)
Q Consensus 250 A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~qi~~r 326 (448)
|||||||||+++|+++|.|+++||.++. ..+++|||+||.+++ | +.++++++++|||+.++..+++.+|
T Consensus 142 A~P~TfG~~l~~~~~~L~r~~~rL~~~~~~~~~~~lgga~Gt~~~~----~----~~~~~~~a~~LG~~~~~~~~~~~~r 213 (387)
T cd01360 142 AEPTTFGLKFALWYAEFKRHLERLKEARERILVGKISGAVGTYANL----G----PEVEERVAEKLGLKPEPISTQVIQR 213 (387)
T ss_pred ceeehHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHhhcCccC----C----HHHHHHHHHHcCCCCCCCCCcccCc
Confidence 9999999999999999999999999996 678889999996543 3 2468999999999998877788999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhhhcc
Q 013159 327 DYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSMKLP 404 (448)
Q Consensus 327 D~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~~L~ 404 (448)
|++++++++++.++++|+|||+|+++|++ +|++.+....+++|||||||||||+.+|+++++++ .+.|.+...+.
T Consensus 214 D~~~e~~~~la~~~~~L~ria~Dl~~~s~~e~gel~e~~~~~~~GSS~MPqKrNP~~~E~i~~~a~---~~~g~~~~~~~ 290 (387)
T cd01360 214 DRHAEYLSTLALIASTLEKIATEIRHLQRTEVLEVEEPFSKGQKGSSAMPHKRNPILSENICGLAR---VIRSNVIPALE 290 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccceecCCCCCCCCcCCCCCCCCCHHHHHHHHHHH---HHHHHHHHHHh
Confidence 99999999999999999999999998875 78777655467899999999999999999998544 77776654331
Q ss_pred --ccccccccccchH---HHHHhHHH---HHHHHhhcccccccccc
Q 013159 405 --ISRWQVRSNLTLL---LIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 405 --~s~~qRDl~~~~~---~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
.++++||+++++. .+++++.. ...++..+...++|++|
T Consensus 291 ~~~~~~~rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~ 336 (387)
T cd01360 291 NVALWHERDISHSSVERVILPDATILLDYILRRMTRVLENLVVYPE 336 (387)
T ss_pred hhHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 4788999999873 45555555 77788999999999876
No 13
>TIGR00928 purB adenylosuccinate lyase. This family consists of adenylosuccinate lyase, the enzyme that catalyzes step 8 in the purine biosynthesis pathway for de novo synthesis of IMP and also the final reaction in the two-step sequence from IMP to AMP.
Probab=100.00 E-value=5.4e-67 Score=548.25 Aligned_cols=332 Identities=35% Similarity=0.443 Sum_probs=285.2
Q ss_pred CCccCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHHHHHhhhCC
Q 013159 87 LDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNH 166 (448)
Q Consensus 87 ~dgry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~~~e~~t~h 166 (448)
+|+||+ +++|+.+|||++++++|++||+||+.+|+ ++|+||++++++ |.+. ..+...|++++++.++.++|
T Consensus 1 ~~~~y~--~~~~~~ifs~~~~~~~~l~ve~A~a~~l~---~~giip~~~a~~---i~~~-~~~~~~d~~~l~~~~~~~~~ 71 (435)
T TIGR00928 1 LDERYG--TPEMRAIWSEENKFKTWLDVEVALLRALA---ELGVIPAEAVKE---IRAK-ANFTDVDLARIKEIEAVTRH 71 (435)
T ss_pred CCcccC--cHHHHHHhCHHHHHHHHHHHHHHHHHHHH---HcCCCCHHHHHH---HHhh-CCCCccCHHHHHHHHHHHCc
Confidence 588998 58999999999999999999999999999 899999755555 4443 33444578889888999999
Q ss_pred cHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeecccc
Q 013159 167 DVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTH 246 (448)
Q Consensus 167 Dv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH 246 (448)
||+++|++|++++|+ +++|||+|+||||+++|+++|++|+++. .+.+.|..++++|.++|++|++++|+||||
T Consensus 72 ~v~~~e~~l~~~~g~------~~~~vh~g~SsnD~~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~A~~~~~t~m~grTH 144 (435)
T TIGR00928 72 DVKAVVYALKEKCGA------EGEFIHFGATSNDIVDTALALLLRDALE-IILPKLKQLIDRLKDLAVEYKDTVMLGRTH 144 (435)
T ss_pred ChHHHHHHHHHHhhh------hhhheeecccHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHccchHhHHhc
Confidence 999999999999974 7999999999999999999999999998 599999999999999999999999999999
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCCCCccc
Q 013159 247 GQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQI 323 (448)
Q Consensus 247 ~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~qi 323 (448)
+|||+|||||||+++|+++|.|+++||.++. ..+++|||+||....+ ++. +.+.+++++.|||+.++.++++
T Consensus 145 ~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lgGa~Gt~~~~~---~~~--~~~~~~~a~~LGl~~~~~~~~~ 219 (435)
T TIGR00928 145 GQHAEPTTLGKKFALWADEMKRQLERLLQAKERIKVGGISGAVGTHAAAY---PLV--EEVEERVTEFLGLKPVPISTQI 219 (435)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccchhhhHhhcc---ccH--HHHHHHHHHhcCCCCCCCCccc
Confidence 9999999999999999999999999999995 5677789999954332 222 4678899999999998765688
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccceee--ecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhh
Q 013159 324 ETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQ--VTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSM 401 (448)
Q Consensus 324 ~~rD~~ael~~~la~i~~~L~kia~Di~l~~s~g~~~~--~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~ 401 (448)
.+||++++++++++.++++|+|||+||++|++.|++++ +...+++|||||||||||+.+|++++++. .+.|..+.
T Consensus 220 ~~rD~~~e~~~~l~~la~~L~ria~Dl~l~s~~~~~el~~~~~~~~~GSS~MP~K~NP~~~E~i~~~a~---~~~g~~~~ 296 (435)
T TIGR00928 220 EPRDRHAELLDALALLATTLEKFAVDIRLLQRTEHFEVEEPFGKGQVGSSAMPHKRNPIDFENVCGLAR---VIRSVLSP 296 (435)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceecccCCCCCCcCCCCcCcCcHHHHHHHHHHH---HHHHHHHH
Confidence 99999999999999999999999999999998555554 33345799999999999999999998554 77777654
Q ss_pred hcc--ccccccccccchH---HHHHhHHH---HHHHHhhcccccccccc
Q 013159 402 KLP--ISRWQVRSNLTLL---LIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 402 ~L~--~s~~qRDl~~~~~---~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
.+. .+++|||++++.. .+++.+.. ...++..+...++|++|
T Consensus 297 ~~~~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~ 345 (435)
T TIGR00928 297 ALENVPLWHERDLTDSSVERIILPDSFILADIMLKTTLKVVKKLVVNPE 345 (435)
T ss_pred HHHHhhHHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHH
Confidence 443 4789999998864 35555555 77788889999999876
No 14
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like. This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.
Probab=100.00 E-value=1.9e-65 Score=536.85 Aligned_cols=332 Identities=22% Similarity=0.263 Sum_probs=286.6
Q ss_pred CCccCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHHHHHhhhCC
Q 013159 87 LDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNH 166 (448)
Q Consensus 87 ~dgry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~~~e~~t~h 166 (448)
+++||+ +++|+.+|||+++++.|+.||.||+++|+ +.|+||++.+++ |.+.+..+. .+++.+.+.+.+++|
T Consensus 2 ~~~~y~--~~~~~~~~s~~~~i~~~~~ve~A~a~~l~---~~Gii~~~~a~~---I~~al~~~~-~~~~~~~~~~~~~~~ 72 (437)
T cd01597 2 LGDLFG--TPAMREIFSDENRVQAMLDVEAALARAQA---ELGVIPKEAAAE---IAAAADVER-LDLEALAEATARTGH 72 (437)
T ss_pred CccccC--CHHHHHHcCcHHHHHHHHHHHHHHHHHHH---HcCCCCHHHHHH---HHHhccccC-CCHHHHHHHHHHhCC
Confidence 678998 47999999999999999999999999999 899999755555 444444442 367888888899999
Q ss_pred cHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeecccc
Q 013159 167 DVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTH 246 (448)
Q Consensus 167 Dv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH 246 (448)
+|+++|++|++++|. +.++|||+||||||+++|+++|++|+++.. +.+.|.+++++|.++|++|++++|+||||
T Consensus 73 ~v~a~e~~l~e~~g~-----~~g~~lH~grSrnD~~~Ta~~l~lr~~l~~-l~~~l~~l~~~L~~~A~~~~~~~m~grTH 146 (437)
T cd01597 73 PAIPLVKQLTAACGD-----AAGEYVHWGATTQDIIDTALVLQLRDALDL-LERDLDALLDALARLAATHRDTPMVGRTH 146 (437)
T ss_pred CcHHHHHHHHHHcCc-----cccCeeecCccHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeehhhc
Confidence 999999999999985 368999999999999999999999999994 99999999999999999999999999999
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCCCCccc
Q 013159 247 GQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQI 323 (448)
Q Consensus 247 ~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~qi 323 (448)
+||||||||||||++|+++|.|+++||.++. ..+++|||+||.+++ |. +++.+++++++.|||+.++.+ ++
T Consensus 147 ~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGga~Gtg~~~----~~-~~~~~~~~~a~~LGf~~~~~~-~~ 220 (437)
T cd01597 147 LQHALPITFGLKVAVWLSELLRHRERLDELRPRVLVVQFGGAAGTLASL----GD-QGLAVQEALAAELGLGVPAIP-WH 220 (437)
T ss_pred CccceechHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccc----CC-cHHHHHHHHHHHcCCCCCCCc-cc
Confidence 9999999999999999999999999999996 678889999996544 42 446788999999999998764 56
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhh
Q 013159 324 ETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSM 401 (448)
Q Consensus 324 ~~rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~ 401 (448)
.+||++++++++++.++++|+|||+|+++|++ +|++.++...+++||||||||+||+.+|+++++ |+.+.|+++.
T Consensus 221 ~~rd~~~e~~~~l~~~a~~l~rla~Dl~l~s~~e~gel~~~~~~~~~GSSiMPqK~NP~~~E~i~~~---a~~~~g~~~~ 297 (437)
T cd01597 221 TARDRIAELASFLALLTGTLGKIARDVYLLMQTEIGEVAEPFAKGRGGSSTMPHKRNPVGCELIVAL---ARRVPGLAAL 297 (437)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeecccCCCCCCCCCCCCCcCcHHHHHHHHH---HHHHHHHHHH
Confidence 89999999999999999999999999999986 787776433589999999999999999999985 4588888765
Q ss_pred hcc--ccccccccc---cchHHHHHhHHH---HHHHHhhcccccccccc
Q 013159 402 KLP--ISRWQVRSN---LTLLLIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 402 ~L~--~s~~qRDl~---~~~~~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
.+. .++||||++ .....+++.+.. ...++..++..++|++|
T Consensus 298 ~~~~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~ 346 (437)
T cd01597 298 LLDAMVQEHERDAGAWHAEWIALPEIFLLASGALEQAEFLLSGLEVNED 346 (437)
T ss_pred HHHhchhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHH
Confidence 553 367999994 444555566655 66688888888888875
No 15
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=3.9e-65 Score=520.70 Aligned_cols=307 Identities=20% Similarity=0.205 Sum_probs=265.3
Q ss_pred CCCccCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHHHHHhhhC
Q 013159 86 PLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTN 165 (448)
Q Consensus 86 p~dgry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~~~e~~t~ 165 (448)
.++.||. +++|+++|||++++++|++||+||+++++ ++|+||++.+++ |.+.++++. .|..++.+.+..++
T Consensus 10 ~~~~~~~--~~~~~~~~s~~~~i~a~l~vE~A~a~a~~---~~G~Ip~~~a~~---I~~a~~~~~-~d~~~~~~~~~~~g 80 (351)
T PRK05975 10 FLSGLFG--DDEIAALFSAEADIAAMLAFEAALAEAEA---EHGIIPAEAAER---IAAACETFE-PDLAALRHATARDG 80 (351)
T ss_pred hhhccCC--CHHHHHHcCcHHHHHHHHHHHHHHHHHHH---HcCCCCHHHHHH---HHHHhccCC-CCHHHHhhHHHhcC
Confidence 3666887 48999999999999999999999999999 899999755555 455555655 37788888999999
Q ss_pred CcHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccc
Q 013159 166 HDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRT 245 (448)
Q Consensus 166 hDv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRT 245 (448)
|++.++++.|++++|. ++++|||+|+|||||+||+++|++|+++. .+.+.|..++++|.++|++|++|+|+|||
T Consensus 81 ~~v~~~v~~l~~~~g~-----~~~~~vH~G~TsnDi~dTa~~L~lr~~l~-~l~~~L~~l~~~L~~lA~~~~~t~m~grT 154 (351)
T PRK05975 81 VVVPALVRQLRAAVGE-----EAAAHVHFGATSQDVIDTSLMLRLKAASE-ILAARLGALIARLDALEATFGQNALMGHT 154 (351)
T ss_pred CcHHHHHHHHHHHhCc-----hhhCcccCCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCeeeccc
Confidence 9999999999999974 47999999999999999999999999998 59999999999999999999999999999
Q ss_pred cCCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCCCCcc
Q 013159 246 HGQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQ 322 (448)
Q Consensus 246 H~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~q 322 (448)
|+|||+|||||+|+++|+++|.|+++||.++. ..+++||||||+++++. .++.+++++++.|||..++ . +
T Consensus 155 H~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~~~~~~~~~lGGAvGt~~~~~~-----~~~~~~~~~a~~LGl~~~~-~-~ 227 (351)
T PRK05975 155 RMQAAIPITVADRLASWRAPLLRHRDRLEALRADVFPLQFGGAAGTLEKLGG-----KAAAVRARLAKRLGLEDAP-Q-W 227 (351)
T ss_pred CCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccHhccCccCCC-----cHHHHHHHHHHHhCcCCCc-c-h
Confidence 99999999999999999999999999999996 68899999999766532 2457899999999997654 3 4
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-cceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhh
Q 013159 323 IETHDYMAKLFYAFVRFNNILIDFDRDVWGYISL-AYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSM 401 (448)
Q Consensus 323 i~~rD~~ael~~~la~i~~~L~kia~Di~l~~s~-g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~ 401 (448)
+.+||++++++++++.++++|+|||+|+++|++. |++.+ +. ++||||||||+||+.+|++++ +++.+.+++..
T Consensus 228 ~~~rD~~~e~~~~la~la~~l~kiA~Di~ll~s~egev~~--~~-~~GSS~MPhKrNPv~~E~i~~---~ar~~~~~~~~ 301 (351)
T PRK05975 228 HSQRDFIADFAHLLSLVTGSLGKFGQDIALMAQAGDEISL--SG-GGGSSAMPHKQNPVAAETLVT---LARFNATQVSG 301 (351)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccC--CC-CCccCCCCCCcCcHHHHHHHH---HHHHHHHHHHH
Confidence 6889999999999999999999999999999864 55544 33 599999999999999999887 45566666544
Q ss_pred hcc--ccccccccccchHHHH
Q 013159 402 KLP--ISRWQVRSNLTLLLIF 420 (448)
Q Consensus 402 ~L~--~s~~qRDl~~~~~~~~ 420 (448)
.+. ...+|||...|...+.
T Consensus 302 ~~~~~~~~~er~~~~~~~e~~ 322 (351)
T PRK05975 302 LHQALVHEQERSGAAWTLEWM 322 (351)
T ss_pred HHhcccchhccCCchHHHHHH
Confidence 332 4788999998775543
No 16
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=5.4e-65 Score=535.45 Aligned_cols=339 Identities=20% Similarity=0.197 Sum_probs=287.2
Q ss_pred cCCCC-CccCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHHHHH
Q 013159 83 ALSPL-DGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIE 161 (448)
Q Consensus 83 ~~sp~-dgry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~~~e 161 (448)
+.|++ ++||. +++|+.+|||++++++|++||.|++++++ ++|+||++.+++| .+.++. +..|++++.+++
T Consensus 3 ~~~~~~~~~~~--~~~~~~i~s~~~~i~a~l~ve~A~A~a~~---~~G~ip~~~a~~I---~~a~~~-~~~d~~~~~~~~ 73 (452)
T PRK09053 3 ASARLTDLYFG--SPAMRAIFSDRATVQRMLDFEAALARAEA---ACGVIPAAAVAPI---EAACDA-ERLDLDALAQAA 73 (452)
T ss_pred CCchhhhhhcC--CHHHHHHcCcHHHHHHHHHHHHHHHHHHH---HcCCCCHHHHHHH---HHhccc-cCCCHHHHHHHH
Confidence 34454 44776 47999999999999999999999999999 8999997666665 444422 213789999999
Q ss_pred hhhCCcHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccee
Q 013159 162 RVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISM 241 (448)
Q Consensus 162 ~~t~hDv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m 241 (448)
.+++|++.+++..|++.++..+ .+.++|||+|+|||||+||+++|++|+++. .+.+.|..++++|.++|++|++|+|
T Consensus 74 ~~~~~~~~~lv~~l~~~~~~~~--~~~~~~vH~G~SsnDi~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~A~~~~~t~~ 150 (452)
T PRK09053 74 ALAGNLAIPLVKQLTAQVAARD--AEAARYVHWGATSQDIIDTGLVLQLRDALD-LLEPDLDRLCDALATLAARHRATPM 150 (452)
T ss_pred hhcCCchHHHHHHHHHHhcccC--cchhccccCCCChhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCCee
Confidence 9999999999999999997311 147999999999999999999999999999 5999999999999999999999999
Q ss_pred eccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCC
Q 013159 242 LSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNP 318 (448)
Q Consensus 242 ~gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~ 318 (448)
+||||+|||+|||||+|+++|+++|.|+++||.++. ..+++||+|||+++++ +..+ .+++++++.|||+.++
T Consensus 151 ~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGgavGt~~~~~----~~~~-~v~~~~a~~LGl~~~~ 225 (452)
T PRK09053 151 VGRTWLQQALPVTLGLKFAGWLDALLRHRQRLAALRPRALVLQFGGAAGTLASLG----EQAL-PVAQALAAELQLALPA 225 (452)
T ss_pred ehhccCCcceechHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccchhhcccccc----cchH-HHHHHHHHHcCCCCCC
Confidence 999999999999999999999999999999999996 6788999999987653 3333 4789999999999877
Q ss_pred CCccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHH
Q 013159 319 YVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDL 396 (448)
Q Consensus 319 ~~~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~ 396 (448)
.++ +.+||++++++++++.++++|+|||+||++|++ +|++.+....+++||||||||+||+.+|++++ +|+.+.
T Consensus 226 ~~~-~~~rD~~~e~~~~la~la~~L~kia~Di~ll~~~e~gev~e~~~~~~~GSSiMP~KrNPv~~E~i~~---~a~~v~ 301 (452)
T PRK09053 226 LPW-HTQRDRIAEFASALGLLAGTLGKIARDVSLLMQTEVGEVFEPAAAGKGGSSTMPHKRNPVGCAAVLT---AATRAP 301 (452)
T ss_pred CCc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhccccCCCCCcCCCCCCCCchHHHHHHH---HHHHHH
Confidence 653 578999999999999999999999999998874 88886656678899999999999999999987 555888
Q ss_pred hhhhhhcc--ccccccccccch---HHHHHhHHH---HHHHHhhcccccccccc
Q 013159 397 SFLSMKLP--ISRWQVRSNLTL---LLIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 397 g~la~~L~--~s~~qRDl~~~~---~~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
|+....+. ...++||+..+. ..+++.+.. ....+..+...++|++|
T Consensus 302 g~~~~~~~~~~~~~erd~~~~~~~~~~l~~~~~~~~~al~~~~~~l~~l~v~~e 355 (452)
T PRK09053 302 GLVATLFAAMPQEHERALGGWHAEWDTLPELACLAAGALAQMAQIVEGLEVDAA 355 (452)
T ss_pred HHHHHHHHhChhhhcccCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHH
Confidence 87755443 477899986654 344555555 66677788888888876
No 17
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase. Members of this family are 3-carboxy-cis,cis-muconate cycloisomerase, the enzyme the catalyzes the second step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=1.5e-64 Score=514.19 Aligned_cols=306 Identities=18% Similarity=0.198 Sum_probs=266.5
Q ss_pred CCccCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHHHHHhhhCC
Q 013159 87 LDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNH 166 (448)
Q Consensus 87 ~dgry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~~~e~~t~h 166 (448)
++++|.+ ++|+.+|||++++++|++||+||+++++ +.|+||++.+++ |.+.++++. .|..++.+.+..++|
T Consensus 2 ~~~~~~~--~~~~~i~sd~~~i~~~~~ve~A~a~al~---~~Gii~~~~a~~---I~~a~~~~~-~d~~~~~~~~~~~~~ 72 (338)
T TIGR02426 2 LDGLFGD--PAALELFSDRAFLRAMLDFEAALARAQA---DAGLIPAEAAAA---IEAACAAAA-PDLEALAHAAATAGN 72 (338)
T ss_pred CccccCC--HHHHHHcCCHHHHHHHHHHHHHHHHHHH---HcCCCCHHHHHH---HHHhhccCC-CCHHHHHhHHHhcCC
Confidence 4668884 7999999999999999999999999999 899999755555 455566665 377888888888999
Q ss_pred cHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeecccc
Q 013159 167 DVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTH 246 (448)
Q Consensus 167 Dv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH 246 (448)
++.++|++|++++|+ ++++|||+|+||||+++|+++|++|+++.. +.+.+.+++++|.++|++|++++|+||||
T Consensus 73 ~~~~~~~~l~~~~g~-----~~g~~vH~G~S~nD~~~Ta~~L~lr~~l~~-l~~~l~~l~~~L~~~A~~~~~~~m~grTH 146 (338)
T TIGR02426 73 PVIPLVKALRKAVAG-----EAARYVHRGATSQDVIDTSLMLQLRDALDL-LLADLGRLADALADLAARHRDTPMTGRTL 146 (338)
T ss_pred cHHHHHHHHHHHhCc-----cccCcccCCCChhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCCceecccC
Confidence 999999999999985 478999999999999999999999999984 99999999999999999999999999999
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCCCCccc
Q 013159 247 GQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQI 323 (448)
Q Consensus 247 ~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~qi 323 (448)
+|||||||||||+++|+++|.|+++||.++. ..+++|||+||.+++ ++.++ .+++++++.|||+.++.+ ++
T Consensus 147 ~Q~A~P~T~G~~l~~~~~~l~r~~~rL~~~~~~~~~~~lGgavGtg~~~----~~~~~-~v~~~~a~~LGl~~~~~~-~~ 220 (338)
T TIGR02426 147 LQQAVPTTFGLKAAGWLAAVLRARDRLAALRTRALPLQFGGAAGTLAAL----GTRGG-AVAAALAARLGLPLPALP-WH 220 (338)
T ss_pred CCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcchhccCCCc----cchHH-HHHHHHHHHhCcCCCCCc-ch
Confidence 9999999999999999999999999999996 678889999997554 33333 478999999999987654 46
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhh
Q 013159 324 ETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSM 401 (448)
Q Consensus 324 ~~rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~ 401 (448)
.+||++++++++++.++++|+|||+|+++|++ +|++.+ ++++||||||||+||+.+|++++++ +.+.|.++.
T Consensus 221 ~~rd~~~e~~~~l~~la~~l~ria~Dl~l~s~~e~gei~~---~~~~GSSiMPqK~NP~~~E~i~~~a---~~~~g~~~~ 294 (338)
T TIGR02426 221 TQRDRIAEFGSALALVAGALGKIAGDIALLSQTEVGEVFE---AGGGGSSAMPHKRNPVGAALLAAAA---RRVPGLAAT 294 (338)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhh---CCCCCcccCCCCCCcHHHHHHHHHH---HHHHHHHHH
Confidence 88999999999999999999999999999985 677644 5579999999999999999999854 478887755
Q ss_pred hcc--ccccccccccchHHH
Q 013159 402 KLP--ISRWQVRSNLTLLLI 419 (448)
Q Consensus 402 ~L~--~s~~qRDl~~~~~~~ 419 (448)
.+. ...+|||...|...+
T Consensus 295 ~~~~~~~~~Er~~~~~~~e~ 314 (338)
T TIGR02426 295 LHAALPQEHERSLGGWHAEW 314 (338)
T ss_pred HHHhchHhhccCCCchHHHH
Confidence 543 477899999886543
No 18
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-61 Score=496.55 Aligned_cols=327 Identities=20% Similarity=0.227 Sum_probs=274.6
Q ss_pred CCCCCccCCCCccchHHhc-----ccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHH
Q 013159 84 LSPLDGRYWSKVKDLAPYM-----SEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVK 158 (448)
Q Consensus 84 ~sp~dgry~~~~~el~~if-----Se~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~ 158 (448)
-.+|.|||+.+.++...-| .|..++.+-+..-+||+.+|+ +.|+|+. ++.++|.+.+.++.. +...-+
T Consensus 3 ~~lwggRf~~~~~~~~~~~~~Si~~D~~l~~~di~~s~AH~~mL~---~~Gii~~---ee~~~I~~~L~~l~~-e~~~g~ 75 (459)
T COG0165 3 NKLWGGRFSGGPDPLVKEFNASISFDKRLAEYDIAGSIAHAKMLA---KQGIITE---EEAAKILEGLEELLE-EIRAGK 75 (459)
T ss_pred CCCCCCCccCCCcHHHHHHhccchhHHHHHHHHHHHhHHHHHHHH---HcCCCCH---HHHHHHHHHHHHHHH-HHhcCC
Confidence 4689999998766655544 455677777777899999999 8999996 444444443333321 110001
Q ss_pred HHHhhhCCcH-hHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 013159 159 NIERVTNHDV-KAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNA 237 (448)
Q Consensus 159 ~~e~~t~hDv-~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~ 237 (448)
.......+|| .++|++|.+++|+ .++++|+||||||+|.|.++||+|+.+.. +...+..|+++|.++|++|.
T Consensus 76 ~~~~~~~EDvH~aiE~~L~~~iG~------~ggkLhtgRSRNDQVatd~rL~lr~~~~~-l~~~i~~l~~aL~~~Ae~~~ 148 (459)
T COG0165 76 FELDPDDEDVHTAIEARLIERIGD------VGGKLHTGRSRNDQVATDLRLWLRDKLLE-LLELIRILQKALLDLAEEHA 148 (459)
T ss_pred ccCCCccccHHHHHHHHHHHHHhh------hhchhccccchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcc
Confidence 1222346799 9999999999996 89999999999999999999999999996 99999999999999999999
Q ss_pred cceeeccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhH------hhhcccccc-cccccccccCCCCChhhhHHHHHH
Q 013159 238 NISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVE------IMGKFAGAV-GNYNAHLSAYPDVNWPQITEDFVK 310 (448)
Q Consensus 238 dt~m~gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~------~lg~~gGAv-GT~~a~~~~~p~~d~~~v~~~la~ 310 (448)
+++||||||+|+|||+|||||+.+|++.|.|+++||.++. |+|. ||. || .|| +| ++.+|+
T Consensus 149 ~~imPGyTHlQ~AQPvtf~H~llay~~~l~RD~~Rl~d~~~rvn~sPLGa--gAlaGt------~~~-iD----R~~tA~ 215 (459)
T COG0165 149 ETVMPGYTHLQRAQPVTFAHHLLAYAEMLARDIERLRDALKRVNVSPLGA--GALAGT------PFP-ID----RERTAE 215 (459)
T ss_pred CCccCCcccccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccc--cccCCC------CCC-CC----HHHHHH
Confidence 9999999999999999999999999999999999999984 6663 553 55 456 34 678899
Q ss_pred HcCCCC---CCCCccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHh
Q 013159 311 SLGLSF---NPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENS 385 (448)
Q Consensus 311 ~LGL~~---~~~~~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~ 385 (448)
.|||+. |+. +++++||+++|+++++++++..|+|||+|+.+|++ |||+++ +++..+||||||||+||+.+|++
T Consensus 216 lLGF~~~~~Nsl-davs~Rdf~le~l~~~s~~~~~LSRlaedlI~wss~EfgfI~l-~D~~sTGSSIMPQKKNPD~~ELi 293 (459)
T COG0165 216 LLGFDAVTRNSL-DAVSDRDFILEFLSAAALIMVHLSRLAEDLILWSSPEFGFIEL-PDEFSTGSSIMPQKKNPDVLELI 293 (459)
T ss_pred HcCCchhhcCch-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCceEeC-CcccccccccCCCCCCCcHHHHH
Confidence 999997 565 47899999999999999999999999999999986 899998 88999999999999999999999
Q ss_pred hhhhhhhhHHHhhhhhhc-----cccccccccccchHHHHHhHHH---HHHHHhhcccccccccc
Q 013159 386 EGNLGKANEDLSFLSMKL-----PISRWQVRSNLTLLLIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 386 ~g~~~la~~v~g~la~~L-----~~s~~qRDl~~~~~~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
||+.| ++.|.+...+ .+..|+||+|+.|+.+|+++++ .+.++..+...++|++|
T Consensus 294 Rgk~g---rv~G~l~~ll~~~k~lPlaYnrDlQedke~lfds~~t~~~~l~~~~~mv~~l~vn~e 355 (459)
T COG0165 294 RGKAG---RVIGALTGLLTIMKGLPLAYNRDLQEDKEPLFDSVDTLEDSLRVLAGMVSGLTVNKE 355 (459)
T ss_pred HHhhh---hhHHHHHHHHHHHhcCcccccHHHHhhhHHHHHHHHHHHHHHHHHHHHHccCeeCHH
Confidence 99888 8888765443 1489999999999999999999 66688888999999876
No 19
>PRK04833 argininosuccinate lyase; Provisional
Probab=100.00 E-value=8.5e-61 Score=503.72 Aligned_cols=330 Identities=18% Similarity=0.187 Sum_probs=276.6
Q ss_pred CCCCccCCCCccchHHhcccchhhHHHHH---HH--HHHHHHHhcCCCCCCCCCCcHHHHHHHH-HHHccCCcccHHhHH
Q 013159 85 SPLDGRYWSKVKDLAPYMSEYGLIYFRVL---VE--IKWLLKLSKIPEVTEVPSFSEEAKSYLQ-GLIDGFNMDDALEVK 158 (448)
Q Consensus 85 sp~dgry~~~~~el~~ifSe~~~i~~~l~---VE--~a~a~ala~~~~~giIp~~~a~a~~~i~-~~~~~~~~~d~~~l~ 158 (448)
.-|++||.+...++...|++...++.|+. || +||+.+|+ ++|+||++.+++|.... .+.++.. .|+..+.
T Consensus 2 ~~~~~r~~~~~~~~~~~~~~~~~~d~~l~~~~i~~~~Aha~~l~---e~Gii~~~~a~~I~~al~~i~~~~~-~~~~~~~ 77 (455)
T PRK04833 2 ALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALV---TVGVLTADEQQQLEEALNELLEEVR-ANPQQIL 77 (455)
T ss_pred cCcccccCCcchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHhhhh-cCCcccC
Confidence 34788999877789999999999999999 99 99999999 99999986666653222 1111111 1222222
Q ss_pred HHHhhhCCcH-hHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 013159 159 NIERVTNHDV-KAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNA 237 (448)
Q Consensus 159 ~~e~~t~hDv-~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~ 237 (448)
....+|| ..+|++|.+++|+ .++|+|+|+||||+++|+++|++|+++.. +.+.|..++++|.++|++|+
T Consensus 78 ---~~~~edv~~~ie~~L~~~~g~------~g~~lH~grSrnD~~~Ta~rl~~r~~l~~-l~~~l~~l~~~L~~~A~~~~ 147 (455)
T PRK04833 78 ---ASDAEDIHSWVEGKLIDKVGD------LGKKLHTGRSRNDQVATDLKLWCKDQVAE-LLTALRQLQSALVETAENNQ 147 (455)
T ss_pred ---CCCCchHHHHHHHHHHHHhcc------ccCcccCCCCchhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcC
Confidence 2334578 7777799999975 78899999999999999999999999994 99999999999999999999
Q ss_pred cceeeccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhccccc--ccccccccccCCCCChhhhHHHHHHHc
Q 013159 238 NISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGA--VGNYNAHLSAYPDVNWPQITEDFVKSL 312 (448)
Q Consensus 238 dt~m~gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGA--vGT~~a~~~~~p~~d~~~v~~~la~~L 312 (448)
+++||||||+|||||||||||+++|++.|.|+++||.++. ..+++||+ +||. +| +| +++++++|
T Consensus 148 ~tvm~GrTH~Q~AqP~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgaA~~GT~------~~-~d----r~~~a~~L 216 (455)
T PRK04833 148 DAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGSGALAGTA------YE-ID----REQLAGWL 216 (455)
T ss_pred CCEEeccccCccceeccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCC------CC-CC----HHHHHHHh
Confidence 9999999999999999999999999999999999999985 45566666 5873 22 23 68899999
Q ss_pred CCCCCCCC--ccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhh
Q 013159 313 GLSFNPYV--TQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGN 388 (448)
Q Consensus 313 GL~~~~~~--~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~ 388 (448)
||+.+..+ +++.+||+++++++++++++++|+|||+|+++|++ +|++++ .++.++||||||||+||+.+|+++++
T Consensus 217 Gf~~~~~n~~~a~~~rd~~~e~~~~l~~~a~~L~ria~Dl~l~ss~e~g~~el-~~~~~~gSSiMPqKrNP~~~E~ir~~ 295 (455)
T PRK04833 217 GFASATRNSLDSVSDRDHVLELLSDASISMVHLSRFAEDLIFFNSGEAGFVEL-SDRVTSGSSLMPQKKNPDALELIRGK 295 (455)
T ss_pred CCCCCCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceee-CCCCCCCcccCCCCCCChHHHHHHHH
Confidence 99886433 25789999999999999999999999999999985 898888 57888999999999999999999985
Q ss_pred hhhhhHHHhhhhhhc-----cccccccccccchHHHHHhHHH---HHHHHhhccccccccccc
Q 013159 389 LGKANEDLSFLSMKL-----PISRWQVRSNLTLLLIFFNFDL---WLCLLRQVPWYLKFKSDL 443 (448)
Q Consensus 389 ~~la~~v~g~la~~L-----~~s~~qRDl~~~~~~~~~~~~~---~~~ll~~~~~~~~~~~~~ 443 (448)
++ .+.|+++..+ ..++|+||++++++.+++.++. ...++..++..++|++|-
T Consensus 296 a~---~~~g~~~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~r 355 (455)
T PRK04833 296 CG---RVQGALTGMLMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPR 355 (455)
T ss_pred HH---HHHhhHHHHHHHHhCChHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCeECHHH
Confidence 55 8888775444 2478999999999999999988 667888899999998763
No 20
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions. The Lyase class I family contains class II fumarase, aspartase, adenylosuccinate lyase (ASL), argininosuccinate lyase (ASAL), prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. It belongs to the Lyase_I superfamily. Proteins of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits.
Probab=100.00 E-value=9e-61 Score=483.79 Aligned_cols=308 Identities=28% Similarity=0.313 Sum_probs=251.7
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHH-HHHhhhCCcHhHHHHHHHHHhccCcchh
Q 013159 108 IYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVK-NIERVTNHDVKAVEYFLKQKCQSQPEIA 186 (448)
Q Consensus 108 i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~-~~e~~t~hDv~a~e~~L~~~~g~~~~l~ 186 (448)
+++|+.||.||+++|+ ++|+||++.++++. +.+..+. .|.++.. +.+..++|+++++|++|++++|+
T Consensus 1 ~~~~l~ve~A~a~al~---~~Gli~~~~a~~I~---~~l~~~~-~~~~~~~~~~~~~~~~~~~~~e~~l~~~~g~----- 68 (325)
T cd01334 1 IRADLQVEKAHAKALA---ELGLLPKEAAEAIL---AALDEIL-EGIAADQVEQEGSGTHDVMAVEEVLAERAGE----- 68 (325)
T ss_pred CHHHHHHHHHHHHHHH---HCCCCCHHHHHHHH---HHHHHHH-hCccccCeeeCCCCccHHHHHHHHHHHHhcc-----
Confidence 4789999999999999 89999976666654 3333332 1333332 56778889999999999999986
Q ss_pred hccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccccCCCCcccchhhHHHHHHHHH
Q 013159 187 KVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTTLGKEISVFAIRL 266 (448)
Q Consensus 187 ~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~Q~A~PtTfG~~la~~~~~L 266 (448)
+.++|+|+|+|||||++|+++|++|+++. .+.+.+.+++++|.++|.+|++|+|+||||+|||+|||||||+++|+++|
T Consensus 69 ~~~~~lH~G~S~nDi~~ta~~l~lr~~~~-~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l 147 (325)
T cd01334 69 LNGGYVHTGRSSNDIVDTALRLALRDALD-ILLPALKALIDALAAKAEEHKDTVMPGRTHLQDAQPTTLGHELAAWAAEL 147 (325)
T ss_pred ccCCCCccCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCcEeecccccccCccccHHHHHHHHHHHH
Confidence 35999999999999999999999999999 59999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhH---hhhccc-ccccccccccccCCCCChhhhHHHHHHHcCCCC-CCCCc-cccchhHHHHHHHHHHHHH
Q 013159 267 GRERQEISQVE---IMGKFA-GAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSF-NPYVT-QIETHDYMAKLFYAFVRFN 340 (448)
Q Consensus 267 ~r~~~rL~~~~---~lg~~g-GAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~-~~~~~-qi~~rD~~ael~~~la~i~ 340 (448)
.|+++||.++. ..+++| ||+|+.+.. ++.+++++++.|||.. ++.++ ++++||++++++++++.++
T Consensus 148 ~r~~~rL~~~~~~~~~~~lG~gA~g~~~~~--------~~~~~~~~a~~LG~~~~~~~~~~a~~~rd~~~e~~~~l~~~~ 219 (325)
T cd01334 148 ERDLERLEEALKRLNVLPLGGGAVGTGANA--------PPIDRERVAELLGFFGPAPNSTQAVSDRDFLVELLSALALLA 219 (325)
T ss_pred HHHHHHHHHHHHHhhhcCCcHhHHhCcCCC--------CcchHHHHHHHhcCcCcCcCHHHHHhCcHHHHHHHHHHHHHH
Confidence 99999999996 567777 999885432 1346899999999944 33333 4799999999999999999
Q ss_pred HHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhhhcc-----ccccccccc
Q 013159 341 NILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSMKLP-----ISRWQVRSN 413 (448)
Q Consensus 341 ~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~~L~-----~s~~qRDl~ 413 (448)
++|+|||+|+++|++ +|++.++. ..++|||||||||||+.+|+++++++ .+.|.++..+. ..++.+|.+
T Consensus 220 ~~l~ria~Dl~~~~~~e~gev~~~~-~~~~gSS~MP~KrNP~~~E~i~~~a~---~~~g~~~~~~~~~~~~~~~~~~~~~ 295 (325)
T cd01334 220 VSLSKIANDLRLLSSGEFGEVELPD-AKQPGSSIMPQKVNPVILELVRGLAG---RVIGNLAALLEALKGGPLEDNVDSP 295 (325)
T ss_pred HHHHHHHHHHHHHcCCCCCeEECCC-CCCCCcccCCCCCCCHHHHHHHHHHH---HHhhHHHHHHHHHhcCchhhhcccH
Confidence 999999999999986 89998843 34899999999999999999998544 77777654432 233556666
Q ss_pred cchHHHHHhHHH---HHHHHhhcccccccc
Q 013159 414 LTLLLIFFNFDL---WLCLLRQVPWYLKFK 440 (448)
Q Consensus 414 ~~~~~~~~~~~~---~~~ll~~~~~~~~~~ 440 (448)
.....+++.+.. ...++..+...++|+
T Consensus 296 ~~~~~l~~~~~~~~~~l~~~~~~~~~l~v~ 325 (325)
T cd01334 296 VEREALPDSFDLLDAALRLLTGVLEGLEVN 325 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcCEeC
Confidence 666666666666 555666666666653
No 21
>PRK06705 argininosuccinate lyase; Provisional
Probab=100.00 E-value=1.8e-60 Score=506.11 Aligned_cols=331 Identities=15% Similarity=0.122 Sum_probs=278.4
Q ss_pred CCCCccCCCCccc-hH----HhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHHH
Q 013159 85 SPLDGRYWSKVKD-LA----PYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKN 159 (448)
Q Consensus 85 sp~dgry~~~~~e-l~----~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~~ 159 (448)
.-+++||.+++.+ +. .-|.++++++.|++||+||+.+|+ +.|+||++++++|. +.+..+...|++++.
T Consensus 10 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~ve~Aha~~l~---~~GiIp~e~a~~I~---~al~~~~~~~~~~l~- 82 (502)
T PRK06705 10 KSEGADFPGKTYVDCVLQHVFNFQRNYLLKDMFQVHKAHIVMLT---EENLMKKEEAKFIL---HALKKVEEIPEEQLL- 82 (502)
T ss_pred HHhcccCCCCcchhHHhhcccchhHHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHH---HHHHHhhhcccCccc-
Confidence 3467788764322 21 245688899999999999999999 89999986666653 333322112455554
Q ss_pred HHhhhCCcH-hHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Q 013159 160 IERVTNHDV-KAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNAN 238 (448)
Q Consensus 160 ~e~~t~hDv-~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~d 238 (448)
...++||| ..+|.++.+..|+ ++++|+|+|+|||||++|+++|++|+++.. +.+.|..++++|.++|++|++
T Consensus 83 -~~~~~edv~~~ie~~l~~~~G~-----~~g~~lH~GrSrnD~v~Ta~~L~lr~~l~~-l~~~l~~l~~~l~~~A~~~~~ 155 (502)
T PRK06705 83 -YTEQHEDLFFLVEHLISQEAKS-----DFVSNMHIGRSRNDMGVTMYRMSLRRYVLR-LMEHHLLLQESILQLAADHKE 155 (502)
T ss_pred -cCCCCCchHHHHHHHHHHhcCc-----hhhccccCCCCHhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCC
Confidence 56789999 8888888888763 379999999999999999999999999995 999999999999999999999
Q ss_pred ceeeccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCC
Q 013159 239 ISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLS 315 (448)
Q Consensus 239 t~m~gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~ 315 (448)
|+||||||+|||||||||||+++|++.|.|+++||.+++ ..+++||++|+.++ +| ..+++++++|||+
T Consensus 156 t~m~g~TH~Q~AqP~T~G~~l~~~~~~l~r~~~rL~~~~~r~~~~plGgaag~gt~----~~-----~~r~~~a~~LGf~ 226 (502)
T PRK06705 156 TIMPAYTHTQPAQPTTFGHYTLAIYDTMQRDLERMKKTYKLLNQSPMGAAALSTTS----FP-----IKRERVADLLGFT 226 (502)
T ss_pred CEEecccCCccceehHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCchhhhhccCC----ch-----HHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999985 67888899988543 33 4689999999999
Q ss_pred CCCCC--ccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhh
Q 013159 316 FNPYV--TQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGK 391 (448)
Q Consensus 316 ~~~~~--~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~l 391 (448)
.+... .++.+||++++++++++.++++|+|||+||++|++ +|++++ .+...+|||||||||||+.+|+++++++
T Consensus 227 ~~~~ns~~a~~~rD~~~e~~~~la~~~~~L~Ria~Dl~~~ss~e~g~iel-~e~~~~gSSiMPqKrNP~~~E~ir~~a~- 304 (502)
T PRK06705 227 NVIENSYDAVAGADYLLEVSSLLMVMMTNTSRWIHDFLLLATKEYDGITV-ARPYVQISSIMPQKRNPVSIEHARAITS- 304 (502)
T ss_pred CCcCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeeee-cCCCCCccCCCCCCcCCHHHHHHHHHHH-
Confidence 85422 24688999999999999999999999999999975 898887 6677799999999999999999998554
Q ss_pred hhHHHhhhhhhcc-----ccccccccccc-hHHHHHhHHHH---HHHHhhcccccccccc
Q 013159 392 ANEDLSFLSMKLP-----ISRWQVRSNLT-LLLIFFNFDLW---LCLLRQVPWYLKFKSD 442 (448)
Q Consensus 392 a~~v~g~la~~L~-----~s~~qRDl~~~-~~~~~~~~~~~---~~ll~~~~~~~~~~~~ 442 (448)
.+.|+++..+. ..+|.+|++.. ++.+|.+++.. +.++..++..++|++|
T Consensus 305 --~~~g~~~~~l~~~~~~~~~~~~d~q~~~~~~~~~~~~~~~~~l~~~~~~l~~l~v~~~ 362 (502)
T PRK06705 305 --SALGEAFTVFQMIHNTPFGDIVDTEDDLQPYLYKGIEKAIRVFCIMNAVIRTMKVEED 362 (502)
T ss_pred --HHHHHHHHHHHHhcCCcchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHCcCEECHH
Confidence 88887755442 47889998877 89999999996 8899999999999986
No 22
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F ....
Probab=100.00 E-value=9.5e-62 Score=488.51 Aligned_cols=294 Identities=27% Similarity=0.423 Sum_probs=244.6
Q ss_pred ccCCCCccchHHhcccchhhHHHHH-----HHHHHHHHHhcCCCCCCCCCCcHHHHHHH-HHHHccCCcccHHhHHHHHh
Q 013159 89 GRYWSKVKDLAPYMSEYGLIYFRVL-----VEIKWLLKLSKIPEVTEVPSFSEEAKSYL-QGLIDGFNMDDALEVKNIER 162 (448)
Q Consensus 89 gry~~~~~el~~ifSe~~~i~~~l~-----VE~a~a~ala~~~~~giIp~~~a~a~~~i-~~~~~~~~~~d~~~l~~~e~ 162 (448)
|||..+++++..+||+.+.+++|+. +|++|++|++ +.|+||++.+++|.+. ..+..+++..|...++..+.
T Consensus 1 Gr~~~~~~~~~~~~s~~~~~~~~l~~~~~~~e~a~~~a~a---~~g~i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~ 77 (312)
T PF00206_consen 1 GRYEVPTDEMYAIFSDRARFDFWLAEYDIRVEAALAKALA---EAGIIPKEAADAIVKALEEILEDGDLDDAFELDEIEE 77 (312)
T ss_dssp EEEEEETTHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHH---HTTSSTHHHHHHHHHHHHHHHHHTCTHGHHHHCSCSS
T ss_pred CCcCCchHHHHHHHCHHHHhCCEeeccHHHHHHHHHHHHH---HhhcchHHHHHHHHHHHHHHHHhhccccccchhhhhc
Confidence 6888889999999999999999999 9999999999 8999998777776542 33333354434455655565
Q ss_pred hhCCcHhH-HHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccee
Q 013159 163 VTNHDVKA-VEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISM 241 (448)
Q Consensus 163 ~t~hDv~a-~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m 241 (448)
.+++++.+ ++.++.++++..+ +.++|||+|+|||||+||+++|++|+++...+.+.|.+++++|.++|++|++|+|
T Consensus 78 ~~~~~~~~~l~~~~~e~~~~~~---~~~~~vH~G~Ts~Di~~Ta~~l~lr~~~~~~l~~~l~~l~~~L~~~a~~~~~t~~ 154 (312)
T PF00206_consen 78 DIGHAVEANLNEVLGELLGEPP---EAGGWVHYGRTSNDIVDTALRLQLRDALLELLLERLKALIDALAELAEEHKDTPM 154 (312)
T ss_dssp SHHHHHHHHHHHHHHHHHTHSS---GGGGGTTTT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSEE
T ss_pred cchhHHHHHHHHHhhhhhhccc---cccccccCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhcCcee
Confidence 55666644 6666666555222 4899999999999999999999999999436999999999999999999999999
Q ss_pred eccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcC-CCC-
Q 013159 242 LSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLG-LSF- 316 (448)
Q Consensus 242 ~gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LG-L~~- 316 (448)
+||||+|||+|||||+|+++|+++|.|+++||+++. ..+++|||+|+.++++ .+ ..+.+++++.|| |..
T Consensus 155 ~grTh~Q~A~P~T~G~~~a~~~~~l~r~~~rL~~~~~~~~~~~lgga~g~gt~~~-----~~-~~~~~~~~~~L~~~~~l 228 (312)
T PF00206_consen 155 PGRTHGQPAQPTTFGHKLAAWADELARDLERLEEARKRLNVSPLGGAVGAGTSLG-----ID-REFQERVAEELGEFTGL 228 (312)
T ss_dssp EEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEETTTTTTTSSHTT-----SH-HHHHHHHHHHHHHHHCS
T ss_pred ccccccccccceeHHHHHHHHHHHHHHHHHHHHHhHhHHHHHhccCCCccccccc-----cC-cchhhhHHhhhhhhhhc
Confidence 999999999999999999999999999999999996 7888899998866543 22 234557777777 433
Q ss_pred ----CCCCccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhh
Q 013159 317 ----NPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLG 390 (448)
Q Consensus 317 ----~~~~~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~ 390 (448)
+++.+|+.+||++++++++++.++++|+|||+|+++|++ +|++++..+.+++||||||||+||+.+|++++
T Consensus 229 ~~~~~~~~~~~~~rd~~~e~~~~l~~l~~~l~kia~Dl~~~~s~e~g~~~~~~~~~~~GSS~MP~K~NP~~~E~i~~--- 305 (312)
T PF00206_consen 229 GVPAPNWHDAVSSRDRLAELASALALLAGTLSKIAEDLRLLSSTEIGEVEEPFPEGQVGSSIMPHKRNPVILENIRG--- 305 (312)
T ss_dssp TEECSSHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTSSEEEEGGGSSSCSSSSTTCEETHHHHHHHH---
T ss_pred ccchhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeecccccccCCCccCCCCCCCHHHHHHHH---
Confidence 445568899999999999999999999999999999987 99999988888889999999999999999987
Q ss_pred hhhHHHh
Q 013159 391 KANEDLS 397 (448)
Q Consensus 391 la~~v~g 397 (448)
+|++++|
T Consensus 306 ~a~~v~G 312 (312)
T PF00206_consen 306 LARQVIG 312 (312)
T ss_dssp HHHHHHH
T ss_pred hhhcCcC
Confidence 4557765
No 23
>TIGR00838 argH argininosuccinate lyase. This model describes argininosuccinate lyase, but may include examples of avian delta crystallins, in which argininosuccinate lyase activity may or may not be present and the biological role is to provide the optically clear cellular protein of the eye lens.
Probab=100.00 E-value=3.2e-59 Score=492.10 Aligned_cols=328 Identities=17% Similarity=0.166 Sum_probs=272.6
Q ss_pred CCCccCCCCccchHHhcc-----cchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccH-HhHHH
Q 013159 86 PLDGRYWSKVKDLAPYMS-----EYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDA-LEVKN 159 (448)
Q Consensus 86 p~dgry~~~~~el~~ifS-----e~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~-~~l~~ 159 (448)
.|++||..++.+....|+ |..++++.+.+++||+.+|+ +.|+||++.+++| .+.++++..... ..+
T Consensus 1 ~~~~r~~~~~~~~~~~~~~~~~~d~~l~~~~i~~~~Ah~~~L~---~~G~l~~~~a~~I---~~al~~i~~~~~~~~~-- 72 (455)
T TIGR00838 1 LWGGRFTGGMDPRVAKFNASLSFDKELAEYDIEGSIAHTKMLK---KAGILTEEEAAKI---IEGLNELKEEGREGPF-- 72 (455)
T ss_pred CCCccCCCCccHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHH---HHHHHHHHcCcccCCc--
Confidence 389999987788788888 89999999999999999999 8999997666555 333333321111 011
Q ss_pred HHhhhCCcH-hHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Q 013159 160 IERVTNHDV-KAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNAN 238 (448)
Q Consensus 160 ~e~~t~hDv-~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~d 238 (448)
......+|+ +++|++|++++|. +.++|||+|+||||+++|+++|++|+++.. +.+.|..++++|.++|++|++
T Consensus 73 ~~~~~~~d~~~~ie~~l~e~~g~-----~~g~~iH~g~SrnD~~~Ta~~L~lr~~l~~-l~~~L~~l~~~L~~~A~~~~~ 146 (455)
T TIGR00838 73 ILDPDDEDIHMAIERELIDRVGE-----DLGGKLHTGRSRNDQVATDLRLYLRDHVLE-LAEALLDLQDALIELAEKHVE 146 (455)
T ss_pred CCCCCcCcHHHHHHHHHHHHhCC-----CccCCccCCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHccC
Confidence 122345788 9999999999984 368899999999999999999999999995 999999999999999999999
Q ss_pred ceeeccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhccccc-c-cccccccccCCCCChhhhHHHHHHHcC
Q 013159 239 ISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGA-V-GNYNAHLSAYPDVNWPQITEDFVKSLG 313 (448)
Q Consensus 239 t~m~gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGA-v-GT~~a~~~~~p~~d~~~v~~~la~~LG 313 (448)
++||||||+|||+|||||||+++|+++|.|+++||.++. ..+++||+ + || .+| ..++.+++.||
T Consensus 147 ~~m~grTH~Q~A~P~T~G~~~~~~~~~L~r~~~rL~~~~~~~~~~plGg~a~aGt------~~~-----~~r~~~a~~LG 215 (455)
T TIGR00838 147 TLMPGYTHLQRAQPITLAHHLLAYAEMLLRDYERLQDALKRVNVSPLGSGALAGT------GFP-----IDREYLAELLG 215 (455)
T ss_pred CEeecccccccceeccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhcccCC------CCC-----CCHHHHHHHcC
Confidence 999999999999999999999999999999999999986 34555544 3 43 233 23678999999
Q ss_pred CCCCCCC--ccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhh
Q 013159 314 LSFNPYV--TQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNL 389 (448)
Q Consensus 314 L~~~~~~--~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~ 389 (448)
|+.+..+ +++.+||++++++++++.++++|+|||+|+++|++ +|++.+ ++.+++||||||||+||+.+|++++++
T Consensus 216 ~~~~~~n~~~a~~~rd~~~e~~~~l~~~a~~L~ria~Dl~l~ss~e~gei~l-p~~~~~GSSiMP~K~NP~~~E~i~~~a 294 (455)
T TIGR00838 216 FDAVTENSLDAVSDRDFILELLFVAALIMVHLSRFAEDLILWSTGEFGFVEL-PDEFSSGSSIMPQKKNPDVAELIRGKT 294 (455)
T ss_pred CCCCcCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeC-CCCCCCccCCCCCCcCChHHHHHHHHH
Confidence 9985432 25889999999999999999999999999999986 899876 556789999999999999999999854
Q ss_pred hhhhHHHhhhhhhc-----cccccccccccchHHHHHhHHH---HHHHHhhcccccccccc
Q 013159 390 GKANEDLSFLSMKL-----PISRWQVRSNLTLLLIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 390 ~la~~v~g~la~~L-----~~s~~qRDl~~~~~~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
+ .+.|+....+ ..++|+||+++.+..++..+.. ...++..+...++|++|
T Consensus 295 ~---~~~g~~~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~~~~al~~~~~~i~~l~v~~~ 352 (455)
T TIGR00838 295 G---RVQGNLTGMLMTLKALPLAYNRDLQEDKEPLFDALKTVELSLEMATGMLDTITVNKE 352 (455)
T ss_pred H---HHhhhHHHHHHHHhcCChHhhhhhHhhHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 4 8888765444 1477999999999988888877 66788889999999876
No 24
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL). This group contains ASAL and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASAL is a cytosolic enzyme which catalyzes the reversible breakdown of argininosuccinate to arginine and fumarate during arginine biosynthesis. In ureotelic species ASAL also catalyzes a reaction involved in the production of urea. Included in this group are the major soluble avian eye lens proteins from duck, delta 1 and delta 2 crystallin. Of these two isoforms only delta 2 has retained ASAL activity. These crystallins may have evolved by, gene recruitment of ASAL followed by gene duplication.
Probab=100.00 E-value=1.9e-59 Score=491.21 Aligned_cols=313 Identities=19% Similarity=0.154 Sum_probs=265.0
Q ss_pred ccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHH-ccCCcccHHhHHHHHhhhCCcHhHHHHHHHHHhcc
Q 013159 103 SEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLI-DGFNMDDALEVKNIERVTNHDVKAVEYFLKQKCQS 181 (448)
Q Consensus 103 Se~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~-~~~~~~d~~~l~~~e~~t~hDv~a~e~~L~~~~g~ 181 (448)
.|.+++++|+.||.||+.+|+ +.|+||++.+++|......+ +.+ +.+++.... .++|+++++|++|++++|+
T Consensus 4 ~d~~~~~~~~~ve~A~a~al~---~~Gii~~~~a~~I~~al~~~~~~~---~~~~~~~~~-~~~~~~~~~e~~l~~~~g~ 76 (435)
T cd01359 4 FDRRLFEEDIAGSIAHAVMLA---EQGILTEEEAAKILAGLAKIRAEI---EAGAFELDP-EDEDIHMAIERRLIERIGD 76 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHhhc---ccCCccCCC-CCCcHHHHHHHHHHHHHHH
Confidence 467889999999999999999 89999987777764322211 122 344554433 5666779999999999974
Q ss_pred CcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccccCCCCcccchhhHHHH
Q 013159 182 QPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTTLGKEISV 261 (448)
Q Consensus 182 ~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~Q~A~PtTfG~~la~ 261 (448)
.++|||+|+|||||++|+++|++|+++.. +.+.|.+++++|.++|++|++++|+||||+|||+|||||+|+++
T Consensus 77 ------~~~~iH~G~SsnDi~~Ta~~L~lr~~l~~-l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~T~G~~~~~ 149 (435)
T cd01359 77 ------VGGKLHTGRSRNDQVATDLRLYLRDALLE-LLELLLDLQRALLDRAEEHADTIMPGYTHLQRAQPITFGHYLLA 149 (435)
T ss_pred ------HHhhhhccCCHHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCEecCCCCCccceeccHHHHHHH
Confidence 78899999999999999999999999995 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCCCCc--cccchhHHHHHHHHH
Q 013159 262 FAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVT--QIETHDYMAKLFYAF 336 (448)
Q Consensus 262 ~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~--qi~~rD~~ael~~~l 336 (448)
|+++|.|+++||.++. ..+++||++|+..+ +| ..++.+++.|||+.+..++ ++.+||+++++++++
T Consensus 150 ~~~~l~r~~~rL~~~~~~~~~~~lGgaag~gt~----~~-----~~~~~~a~~LG~~~~~~~~~~a~~~rd~~~e~~~~l 220 (435)
T cd01359 150 YAEMLERDLERLADAYKRVNVSPLGAGALAGTT----FP-----IDRERTAELLGFDGPTENSLDAVSDRDFVLEFLSAA 220 (435)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCcccccccCCC----CC-----CCHHHHHHHcCCCCCccCHHHHHhcchHHHHHHHHH
Confidence 9999999999999996 56788899987443 23 3478899999999765442 357899999999999
Q ss_pred HHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhhhcc-----ccccc
Q 013159 337 VRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSMKLP-----ISRWQ 409 (448)
Q Consensus 337 a~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~~L~-----~s~~q 409 (448)
+.++++|+||++|+++|++ +|++.+ ++..++|||||||||||+.+|++++ +++.+.|++...+. .++++
T Consensus 221 ~~~a~~l~ria~Dl~l~~~~e~gev~l-pe~~~~GSS~MP~KrNP~~~E~i~~---~a~~~~g~~~~~~~~~~~~~~~~~ 296 (435)
T cd01359 221 ALLMVHLSRLAEDLILWSTQEFGFVEL-PDAYSTGSSIMPQKKNPDVLELIRG---KAGRVIGALAGLLTTLKGLPLAYN 296 (435)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCeeeC-CCCCCCccccCCCCCCCcHHHHHHH---HHHHHhhHHhHHHHHhcCCCCccc
Confidence 9999999999999999986 898886 4566699999999999999999988 45588887644332 47799
Q ss_pred cccccchHHHHHhHHH---HHHHHhhcccccccccc
Q 013159 410 VRSNLTLLLIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 410 RDl~~~~~~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
||++...+.+++.+.. .+.++..++..++|++|
T Consensus 297 ~d~~~~~~~l~~~~~~~~~al~~~~~~l~~l~v~~~ 332 (435)
T cd01359 297 KDLQEDKEPLFDAVDTLIASLRLLTGVISTLTVNPE 332 (435)
T ss_pred hhHHHhhHHHHHHHHHHHHHHHHHHHHHhhCEECHH
Confidence 9999998888888877 77788889999999876
No 25
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=100.00 E-value=2e-59 Score=509.76 Aligned_cols=329 Identities=16% Similarity=0.154 Sum_probs=274.7
Q ss_pred CCCccCCCCccchHHhcccchhhHHHHHHH-----HHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCC---cccHHhH
Q 013159 86 PLDGRYWSKVKDLAPYMSEYGLIYFRVLVE-----IKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFN---MDDALEV 157 (448)
Q Consensus 86 p~dgry~~~~~el~~ifSe~~~i~~~l~VE-----~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~---~~d~~~l 157 (448)
-|++||.++..+...+|++...++.|+.+| +||+.+|+ +.|+||++.+++|. +.++.+. ..|++.+
T Consensus 3 ~~~~r~~~~~~~~~~~~~~~~~~~~~l~~e~i~~~~A~a~~l~---~~Giip~~~a~~I~---~~l~~~~~~~~~~~~~~ 76 (614)
T PRK12308 3 LWGGRFSQAADTRFKQFNDSLRFDYRLAEQDIVGSIAWSKALL---SVGVLSEEEQQKLE---LALNELKLEVMEDPEQI 76 (614)
T ss_pred ccccCCCCcccHHHHHHhcCHHHHHHHHHHHHHHhHHHHHHHH---HCCCCCHHHHHHHH---HHHHHHHHHHhcCCCCC
Confidence 478999987788777999999999999999 99999999 89999976666653 3332221 0133444
Q ss_pred HHHHhhhCCcHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 013159 158 KNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNA 237 (448)
Q Consensus 158 ~~~e~~t~hDv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~ 237 (448)
.+.+.+++|+ .+|++|.+++|+ +++|+|+|+||||+++|+++|++|+++.. +.+.|.+++++|.++|++|+
T Consensus 77 ~~~~~ed~h~--~ie~~L~~~~g~------~~~~iH~g~S~nD~~~Ta~~L~~r~~~~~-l~~~l~~l~~~l~~~a~~~~ 147 (614)
T PRK12308 77 LLSDAEDIHS--WVEQQLIGKVGD------LGKKLHTGRSRNDQVATDLKLWCRQQGQQ-LLLALDQLQQQMVNVAERHQ 147 (614)
T ss_pred CCCccccHHH--HHHHHHHHHhcc------cccceecCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcC
Confidence 4455554444 466999999975 79999999999999999999999999994 99999999999999999999
Q ss_pred cceeeccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCC
Q 013159 238 NISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGL 314 (448)
Q Consensus 238 dt~m~gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL 314 (448)
+|+|+||||+|||||+|||||+++|+++|.|+++||.++. ..+++|| |++++. .+| ..++++++.|||
T Consensus 148 ~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGg--ga~agt--~~~-----~~r~~~a~~LG~ 218 (614)
T PRK12308 148 GTVLPGYTHLQRAQPVTFAHWCLAYVEMFERDYSRLEDALTRLDTCPLGS--GALAGT--AYP-----IDREALAHNLGF 218 (614)
T ss_pred CCEeecCcCCcccEEecHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchh--ccccCC--CCC-----CCHHHHHHHhCC
Confidence 9999999999999999999999999999999999999985 3455554 332211 234 347889999999
Q ss_pred CCCCCC--ccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhh
Q 013159 315 SFNPYV--TQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLG 390 (448)
Q Consensus 315 ~~~~~~--~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~ 390 (448)
..+..+ +++.+||++++++++++.++++|+|||+|+++|++ +|++++ .+..++||||||||+||+.+|+++++
T Consensus 219 ~~~~~n~~da~~~rd~~~e~~~~l~~~~~~l~ria~Dl~~~ss~e~g~~el-~~~~~~gSSiMPqK~NP~~~E~i~~~-- 295 (614)
T PRK12308 219 RRATRNSLDSVSDRDHVMELMSVASISMLHLSRLAEDLIFYNSGESGFIEL-ADTVTSGSSLMPQKKNPDALELIRGK-- 295 (614)
T ss_pred CCCcCCHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCEEe-CccCCCccccCcCccCCcHHHHHHHH--
Confidence 875432 35889999999999999999999999999999985 898888 57788999999999999999999985
Q ss_pred hhhHHHhhhhhhc-----cccccccccccchHHHHHhHHH---HHHHHhhcccccccccc
Q 013159 391 KANEDLSFLSMKL-----PISRWQVRSNLTLLLIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 391 la~~v~g~la~~L-----~~s~~qRDl~~~~~~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
++.+.|+++..+ .+++|+||++++++.+++.++. ...++..++..++|++|
T Consensus 296 -a~~~~g~~~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~ 354 (614)
T PRK12308 296 -TGRVYGALAGMMMTVKALPLAYNKDMQEDKEGLFDALDTWNDCMEMAALCFDGIKVNGE 354 (614)
T ss_pred -HHHHhhHHHHHHHHHcCCchhhccchhhhHHHHHHHHHHHHHHHHHHHHHhCcCEECHH
Confidence 458888775544 2478999999999999999988 66688889999999875
No 26
>PLN02646 argininosuccinate lyase
Probab=100.00 E-value=2.8e-58 Score=486.36 Aligned_cols=328 Identities=18% Similarity=0.165 Sum_probs=267.1
Q ss_pred CCCCccCCCCccchHHhc-----ccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccH-HhHH
Q 013159 85 SPLDGRYWSKVKDLAPYM-----SEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDA-LEVK 158 (448)
Q Consensus 85 sp~dgry~~~~~el~~if-----Se~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~-~~l~ 158 (448)
..|.|||...+.+...-| -|..++++-+.+.+||+.+++ +.|+||++.+++| .+.++++..... ..+.
T Consensus 17 ~~w~~r~~~~~~~~~~~~~~s~~~d~~l~~~di~~~~Aha~~L~---~~Gii~~~~a~~I---~~al~~i~~~~~~~~f~ 90 (474)
T PLN02646 17 KLWGGRFEEGVTPAVEKFNESISFDKRLYKEDIMGSKAHASMLA---KQGIITDEDRDSI---LDGLDEIEKEIEAGKFE 90 (474)
T ss_pred hhhcCCCCCCccHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHH---HHHHHHHHcCcccCCCc
Confidence 479999987555433322 355678888888999999999 8999997555554 333333321100 0110
Q ss_pred HHHhhhCCcH-hHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 013159 159 NIERVTNHDV-KAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNA 237 (448)
Q Consensus 159 ~~e~~t~hDv-~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~ 237 (448)
.....+|+ +++|++|.+++|+ .++|||+|+|||||++|+++|++|+++.. +.+.|.+++++|.++|++|+
T Consensus 91 --~~~~~ed~h~~iE~~L~e~~G~------~g~~lH~grSrND~v~Ta~~L~lr~~l~~-l~~~L~~L~~~L~~~A~~~~ 161 (474)
T PLN02646 91 --WRPDREDVHMNNEARLTELIGE------PAKKLHTARSRNDQVATDTRLWCRDAIDV-IRKRIKTLQVALVELAEKNV 161 (474)
T ss_pred --CCCCCCchHHHHHHHHHHHhch------hhCcccCCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcC
Confidence 11223688 9999999999985 68899999999999999999999999995 99999999999999999999
Q ss_pred cceeeccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhccc-ccc-cccccccccCCCCChhhhHHHHHHHc
Q 013159 238 NISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFA-GAV-GNYNAHLSAYPDVNWPQITEDFVKSL 312 (448)
Q Consensus 238 dt~m~gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~g-GAv-GT~~a~~~~~p~~d~~~v~~~la~~L 312 (448)
+++||||||+|||||||||||+++|++.|.|+++||.++. ..+++| ||+ || .+| +| ++.+++.|
T Consensus 162 dtvmpGrTHlQ~AqPiT~G~~l~~~~~~l~rd~~RL~~~~~r~~~~pLGgga~aGt------~~~-id----r~~~A~~L 230 (474)
T PLN02646 162 DLVVPGYTHLQRAQPVLLSHWLLSHVEQLERDAGRLVDCRPRVNFCPLGSCALAGT------GLP-ID----RFMTAKDL 230 (474)
T ss_pred CCEEecccCCccceeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhcCC------CCC-CC----HHHHHHHh
Confidence 9999999999999999999999999999999999999985 344444 343 44 233 22 77899999
Q ss_pred CCCCCCCC--ccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhh
Q 013159 313 GLSFNPYV--TQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGN 388 (448)
Q Consensus 313 GL~~~~~~--~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~ 388 (448)
||..+..+ +++.+||++++++++++.++++|+|||+|+++|++ +|++.+ ++++++|||||||||||+.+|+++++
T Consensus 231 Gf~~~~~n~~da~~~RD~~~e~~~~la~ia~~LsRia~Dl~l~ss~e~g~v~~-~d~~~~GSSiMPqKrNP~~~E~ir~~ 309 (474)
T PLN02646 231 GFTAPMRNSIDAVSDRDFVLEFLFANSITAIHLSRLGEEWVLWASEEFGFVTP-SDAVSTGSSIMPQKKNPDPMELVRGK 309 (474)
T ss_pred CCCCCCCChHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeeee-CCCCCCCcCCCCCCCCCHHHHHHHHH
Confidence 99775433 35899999999999999999999999999999985 899998 58899999999999999999999985
Q ss_pred hhhhhHHHhhhhhhc-----cccccccccccchHHHHHhHHH---HHHHHhhcccccccccc
Q 013159 389 LGKANEDLSFLSMKL-----PISRWQVRSNLTLLLIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 389 ~~la~~v~g~la~~L-----~~s~~qRDl~~~~~~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
++ ++.|++...+ .++.|+||+|+.++.+++.++. .+.++..+...++|++|
T Consensus 310 a~---~v~G~~~~~~~~~~~~p~~~~rD~q~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~ 368 (474)
T PLN02646 310 SA---RVIGDLVTVLALCKGLPTAYNRDLQEDKEPLFDSVDTVSDMLEVATEFAQNITFNPE 368 (474)
T ss_pred HH---HHHhhhHHHHHHhcCCchHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 54 8888775443 1368999999999999999988 66788888999999876
No 27
>cd01357 Aspartase Aspartase. This subgroup contains Escherichia coli aspartase (L-aspartate ammonia-lyase), Bacillus aspartase and related proteins. It is a member of the Lyase class I family, which includes both aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid.
Probab=100.00 E-value=1.2e-57 Score=479.23 Aligned_cols=320 Identities=20% Similarity=0.146 Sum_probs=257.8
Q ss_pred ccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHc--cC-CcccHHhHHHHHhhh----CCcHhHHHHHH
Q 013159 103 SEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLID--GF-NMDDALEVKNIERVT----NHDVKAVEYFL 175 (448)
Q Consensus 103 Se~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~--~~-~~~d~~~l~~~e~~t----~hDv~a~e~~L 175 (448)
.|.+++++|++||.||++||+ +.|+||++.+++|.+....+. .+ +...++.+.+.+.++ .|++++.. +
T Consensus 36 ~d~~~i~~~l~ve~A~a~al~---~~Giip~~~a~~I~~al~~i~~~~~~d~~~~~~~~~~~~~~~~~~~~~vi~~~--~ 110 (450)
T cd01357 36 IHPELIRALAMVKKAAALANA---ELGLLDEEKAEAIVKACDEIIAGKLHDQFVVDVIQGGAGTSTNMNANEVIANR--A 110 (450)
T ss_pred cCHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHhccccCCCccchhhccccchhhhhHhHHHHHH--H
Confidence 378899999999999999999 899999877777643222111 12 111133444444444 56666655 4
Q ss_pred HHHhccCcchhhccCc--------cccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccccC
Q 013159 176 KQKCQSQPEIAKVLEF--------FHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHG 247 (448)
Q Consensus 176 ~~~~g~~~~l~~~~~~--------vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~ 247 (448)
.+++|+ ++++| ||+|+||||+++|+++|++|+++.. +.+.|.+++++|.++|++|++|+|+||||+
T Consensus 111 ~e~~g~-----~~g~~~~~h~~~~vH~GrSrnD~v~Ta~~L~lr~~l~~-l~~~L~~l~~~L~~~A~~~~~t~m~GrTH~ 184 (450)
T cd01357 111 LELLGH-----EKGEYQYVHPNDHVNMSQSTNDVYPTALRLALILLLRK-LLDALAALQEAFQAKAREFADVLKMGRTQL 184 (450)
T ss_pred HHHhCc-----cccCCcccCCcccccCCCChHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHccCCEeeccccC
Confidence 788874 25676 9999999999999999999999994 999999999999999999999999999999
Q ss_pred CCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccc-cccccccccccCCCCChhhhHHHHHHHcCCCCCCCC---
Q 013159 248 QPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAG-AVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYV--- 320 (448)
Q Consensus 248 Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gG-AvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~--- 320 (448)
|||||||||||+++|+++|.|+++||.++. ..+++|| |+||.......+ -+.+.+++++.|||+.++..
T Consensus 185 Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg~AvGt~~~~~~~~----~~~v~~~~a~~LGl~~~~~~n~~ 260 (450)
T cd01357 185 QDAVPMTLGQEFGAYATALKRDRARIYKARERLREVNLGGTAIGTGINAPPGY----IELVVEKLSEITGLPLKRAENLI 260 (450)
T ss_pred cccccchHHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCChhH----HHHHHHHHHHHhCCCCccCcCHH
Confidence 999999999999999999999999999985 5667776 899853221111 14678899999999964332
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh-----ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHH
Q 013159 321 TQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS-----LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANED 395 (448)
Q Consensus 321 ~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s-----~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v 395 (448)
+++.+||++++++++++.++++|+|||+|+++|+| +|++.+ +.+++|||||||||||+.+|++++ +|+.+
T Consensus 261 ~a~~~rd~~~e~~~~l~~~a~~L~riA~Di~l~ss~e~~~~gev~~--p~~~~GSSiMPqKrNP~~~E~ir~---~a~~v 335 (450)
T cd01357 261 DATQNTDAFVEVSGALKRLAVKLSKIANDLRLLSSGPRAGLGEINL--PAVQPGSSIMPGKVNPVIPEVVNQ---VAFQV 335 (450)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCceeEEC--CCCCCcCCCCCCCcCcHHHHHHHH---HHHHH
Confidence 36689999999999999999999999999999983 677776 368999999999999999999987 45588
Q ss_pred Hhhhhhh-c----cccccccccccchHHHHHhHHH---HHHHH-hhcccccccccc
Q 013159 396 LSFLSMK-L----PISRWQVRSNLTLLLIFFNFDL---WLCLL-RQVPWYLKFKSD 442 (448)
Q Consensus 396 ~g~la~~-L----~~s~~qRDl~~~~~~~~~~~~~---~~~ll-~~~~~~~~~~~~ 442 (448)
.|+++.. + ..++++++.+..++.+|.+++. .+.++ ..+...++|++|
T Consensus 336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~v~~e 391 (450)
T cd01357 336 IGNDLTITMAAEAGQLELNVFEPVIAYNLLESIDILTNAVRTLRERCIDGITANEE 391 (450)
T ss_pred hhHHHHHHHHHhcCcchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 8876544 2 2467888998999999996666 66677 488999999876
No 28
>PRK12273 aspA aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=3.2e-57 Score=478.26 Aligned_cols=318 Identities=20% Similarity=0.159 Sum_probs=257.0
Q ss_pred chhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHH-ccC--CcccHHhHHHHHhhhC----CcHhHHHHHHHH
Q 013159 105 YGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLI-DGF--NMDDALEVKNIERVTN----HDVKAVEYFLKQ 177 (448)
Q Consensus 105 ~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~-~~~--~~~d~~~l~~~e~~t~----hDv~a~e~~L~~ 177 (448)
.+++++|++||+||+++|+ ++|+||++.+++|......+ +.. +..+++...+.+.++. |++++.. .+ +
T Consensus 45 ~~~~~~~l~ve~A~a~al~---~~Gii~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~e~~~~~v~~~i~~~-~~-e 119 (472)
T PRK12273 45 PELIRALAMVKKAAALANK---ELGLLDEEKADAIVAACDEILAGKLHDQFVVDVIQGGAGTSTNMNANEVIANR-AL-E 119 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHhccccCCcccchhhccccchhhhHHHHHHHHH-HH-H
Confidence 5689999999999999999 89999987777764322211 101 1124445545555555 5555554 34 7
Q ss_pred HhccCcchhhccCc--cc------cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccccCCC
Q 013159 178 KCQSQPEIAKVLEF--FH------FACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQP 249 (448)
Q Consensus 178 ~~g~~~~l~~~~~~--vH------~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~Q~ 249 (448)
++|. +.++| || +|+||||+++|+++|++|+++.. +.+.|.+++++|.++|++|++|+|+||||+||
T Consensus 120 ~~g~-----~~~~~~~vHp~d~v~~GrSrnD~v~Ta~~L~lr~~l~~-l~~~L~~l~~~L~~~A~~~~dt~m~GrTH~Q~ 193 (472)
T PRK12273 120 LLGH-----EKGEYQYVHPNDHVNMSQSTNDAYPTAIRIALLLSLRK-LLDALEQLQEAFEAKAKEFADILKMGRTQLQD 193 (472)
T ss_pred HhCc-----ccCCcceeCCCCCCCCCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHccCCEEeecccCcc
Confidence 8874 25677 99 99999999999999999999995 99999999999999999999999999999999
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccc-cccccccccccCCCCChhhhHHHHHHHcCCCCCCCC---cc
Q 013159 250 ASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAG-AVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYV---TQ 322 (448)
Q Consensus 250 A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gG-AvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~---~q 322 (448)
|||||||||+++|+++|.|+++||.++. ..+++|| |+||..... ++. -+.+.+++++.|||+.++.. ++
T Consensus 194 AqP~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~plGg~AvGT~~~i~---~~~-~~~v~~~~A~~LGf~~~~~~n~~da 269 (472)
T PRK12273 194 AVPMTLGQEFGAYAVALAEDRKRLYRAAELLREVNLGATAIGTGLNAP---PGY-IELVVEKLAEITGLPLVPAEDLIEA 269 (472)
T ss_pred ceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccceeCCCCCC---hhH-HHHHHHHHHHHcCCCcccCcCHHHH
Confidence 9999999999999999999999999985 5666766 899853221 111 14678899999999964332 36
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh-----ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHh
Q 013159 323 IETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS-----LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLS 397 (448)
Q Consensus 323 i~~rD~~ael~~~la~i~~~L~kia~Di~l~~s-----~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g 397 (448)
+.+||++++++++++.++++|+|||+||++|+| +|++.+ +.+++|||||||||||+.+|++++. |+++.|
T Consensus 270 ~~~rD~~~e~~~~la~la~~L~rlA~Di~llss~e~~e~gev~l--p~~~~GSSiMPqKrNP~~~E~ir~~---a~~v~G 344 (472)
T PRK12273 270 TQDTGAFVEVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINL--PAVQAGSSIMPGKVNPVIPEVVNQV---CFQVIG 344 (472)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCceEEEC--CCCCCcCCCCCcccCcHHHHHHHHH---HHHHhh
Confidence 789999999999999999999999999999984 677776 3589999999999999999999984 558888
Q ss_pred hhhhhc-----cccccccccccchHHHHHhHHH---HHHHHhh-cccccccccc
Q 013159 398 FLSMKL-----PISRWQVRSNLTLLLIFFNFDL---WLCLLRQ-VPWYLKFKSD 442 (448)
Q Consensus 398 ~la~~L-----~~s~~qRDl~~~~~~~~~~~~~---~~~ll~~-~~~~~~~~~~ 442 (448)
++...+ ..+.++++.+..++.+|++++. ...++.. +...++|++|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~v~~e 398 (472)
T PRK12273 345 NDTTVTMAAEAGQLELNVMEPVIAYNLFESISILTNACRTLREKCIDGITANEE 398 (472)
T ss_pred hHHHHHHHHHcCCchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 875554 2467889999999999777777 6667774 8899999876
No 29
>PRK00485 fumC fumarate hydratase; Reviewed
Probab=100.00 E-value=3.9e-57 Score=477.02 Aligned_cols=324 Identities=19% Similarity=0.173 Sum_probs=246.9
Q ss_pred cchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHH-cc-CCcccHHhHHHHHhhhC-----CcHhHHHHHHH
Q 013159 104 EYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLI-DG-FNMDDALEVKNIERVTN-----HDVKAVEYFLK 176 (448)
Q Consensus 104 e~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~-~~-~~~~d~~~l~~~e~~t~-----hDv~a~e~~L~ 176 (448)
|.+++++|++||.||+++|+ ++|+||++.+++|...+..+ +. ++..=+..+.+....++ |++.+. .+.
T Consensus 41 ~~~~~~~~l~ve~A~a~al~---~~Giip~~~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~--~~~ 115 (464)
T PRK00485 41 PRELIRALALLKKAAARVNA---ELGLLDAEKADAIVAAADEVIAGKHDDHFPLDVWQTGSGTQSNMNVNEVIAN--RAS 115 (464)
T ss_pred CHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHhCccccCCCcchhhccccccccccHHHHHHH--HHH
Confidence 57899999999999999999 89999987777764322221 21 21000233333344444 444333 334
Q ss_pred HHhccC---cchhhccCccccCCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcccceeeccccCCCCcc
Q 013159 177 QKCQSQ---PEIAKVLEFFHFACTSEDINNLAHALMLKEAI-NKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASP 252 (448)
Q Consensus 177 ~~~g~~---~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al-~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~Q~A~P 252 (448)
+..|.. .+--..++|||+|+|||||++|+++|++|+++ .. +.+.|.+++++|.++|++|++++||||||+|+|||
T Consensus 116 ~~~g~~~~~~~~~h~~~~vh~G~SrnD~v~Ta~~L~lr~~l~~~-l~~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~P 194 (464)
T PRK00485 116 ELLGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLAIVER-LLPALEHLRDTLAAKAEEFADIVKIGRTHLQDATP 194 (464)
T ss_pred HhcCccccccCccCccccCCCCCCchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCeeeeeecCcCcee
Confidence 444531 00001578888999999999999999999999 74 99999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhH---hhhcccc-cccccccccccCCCCChhhhHHHHHHHcCCCCCCCCc---cccc
Q 013159 253 TTLGKEISVFAIRLGRERQEISQVE---IMGKFAG-AVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVT---QIET 325 (448)
Q Consensus 253 tTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gG-AvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~---qi~~ 325 (448)
||||||+++|+++|.|+++||.++. ..+++|| |+||..+....| -+.+.+++++.|||+.++..+ ++.+
T Consensus 195 iTfG~~~~~~~~~l~R~~~RL~~~~~r~~~~pLGg~AvGT~~~~~~~~----~~~v~~~~A~~LGl~~~~~~n~~da~~~ 270 (464)
T PRK00485 195 LTLGQEFSGYAAQLEHGIERIEAALPHLYELALGGTAVGTGLNAHPGF----AERVAEELAELTGLPFVTAPNKFEALAA 270 (464)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccCCccCChhH----HHHHHHHHHHHhCCCCccCcCHHHHHhc
Confidence 9999999999999999999999985 5677776 899953322111 146778999999999655443 4589
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhh-----hccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhh
Q 013159 326 HDYMAKLFYAFVRFNNILIDFDRDVWGYI-----SLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLS 400 (448)
Q Consensus 326 rD~~ael~~~la~i~~~L~kia~Di~l~~-----s~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la 400 (448)
||++++++++++.++++|+|||+|+++|+ ++|++.+ +.+++|||||||||||+.+|+++++ |+.+.|++.
T Consensus 271 rD~~~e~~~~la~la~~L~ria~Dl~l~ss~~~~e~gev~l--p~~~~GSSiMPqKrNP~~~E~ir~~---a~~v~g~~~ 345 (464)
T PRK00485 271 HDALVEASGALKTLAVSLMKIANDIRWLASGPRCGLGEISL--PENEPGSSIMPGKVNPTQCEALTMV---CAQVMGNDA 345 (464)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCceEEc--CCCCCCCCCCCCCCCcHHHHHHHHH---HHHHhhhHH
Confidence 99999999999999999999999999998 3788887 3467999999999999999999984 558888876
Q ss_pred hhc---cccccccccccc--hHHHHHhHHH---HHHHHh-hcccccccccc
Q 013159 401 MKL---PISRWQVRSNLT--LLLIFFNFDL---WLCLLR-QVPWYLKFKSD 442 (448)
Q Consensus 401 ~~L---~~s~~qRDl~~~--~~~~~~~~~~---~~~ll~-~~~~~~~~~~~ 442 (448)
..+ ....+|||...+ ...++..+.. ...++. .+...++|++|
T Consensus 346 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~v~~e 396 (464)
T PRK00485 346 AVTFAGSQGNFELNVFKPVIAYNFLQSIRLLADAMRSFADHCVVGIEPNRE 396 (464)
T ss_pred HHHHHhccCcccccccChHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 555 246678888764 3445555555 222333 67888888776
No 30
>PRK02186 argininosuccinate lyase; Provisional
Probab=100.00 E-value=2.6e-57 Score=511.03 Aligned_cols=329 Identities=17% Similarity=0.133 Sum_probs=272.4
Q ss_pred Ccc-CCCCccchHHhcc-------cchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHHH
Q 013159 88 DGR-YWSKVKDLAPYMS-------EYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKN 159 (448)
Q Consensus 88 dgr-y~~~~~el~~ifS-------e~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~~ 159 (448)
-|| +.+.+++++.+|+ +++++++|+++|+||+.||+ +.|+||++.+++|. +.+..+...+++++..
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ah~~~l~---~~gii~~~~a~~I~---~~l~~~~~~~~~~~~~ 483 (887)
T PRK02186 410 AGAARPGLPPEAQAIVYGPGASEAPLAELDHLAAIDEAHLVMLG---DTGIVAPERARPLL---DAHRRLRDAGFAPLLA 483 (887)
T ss_pred CCccccCCChhhhceecCCCcchhhhhhhHHHHHHHHHHHHHHH---HCCCCCHHHHHHHH---HHHHHHHHhHHhhCcC
Confidence 345 4456899999999 99999999999999999999 89999986666653 3332221124444444
Q ss_pred HHhhhCCcHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Q 013159 160 IERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANI 239 (448)
Q Consensus 160 ~e~~t~hDv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt 239 (448)
.....+ +++++|++|.+++|. ++++|+|+|+|||||++|+++|++|+++.. +.+.|..++++|.++|++|+++
T Consensus 484 ~~~~~~-~~~~~e~~L~~~~g~-----~~~~~lH~grSrnD~v~T~~~l~lr~~~~~-l~~~l~~l~~~L~~~A~~~~~~ 556 (887)
T PRK02186 484 RPAPRG-LYMLYEAYLIERLGE-----DVGGVLQTARSRNDINATTTKLHLREATSR-AFDALWRLRRALVFKASANVDC 556 (887)
T ss_pred CCCCcc-hHHHHHHHHHHHhCh-----hhhcccCccccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCC
Confidence 333333 559999999999984 379999999999999999999999999995 9999999999999999999999
Q ss_pred eeeccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCCC
Q 013159 240 SMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSF 316 (448)
Q Consensus 240 ~m~gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~ 316 (448)
+||||||+|||||||||||+++|+++|.|+++||.+++ ..+++||++|+.++ +| +| ++++++.|||+.
T Consensus 557 ~m~g~TH~Q~A~P~T~G~~~~~~~~~l~r~~~rl~~~~~r~~~~plG~aag~gt~----~~-~~----~~~~a~~LGf~~ 627 (887)
T PRK02186 557 ALPIYSQYQPALPGSLGHYLLAVDGALARETHALFALFEHIDVCPLGAGAGGGTT----FP-ID----PEFVARLLGFEQ 627 (887)
T ss_pred EeecCccCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCcccccccCCC----CC-CC----HHHHHHHcCCCC
Confidence 99999999999999999999999999999999999986 56778888887443 33 23 578899999997
Q ss_pred CCCC--ccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhh
Q 013159 317 NPYV--TQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKA 392 (448)
Q Consensus 317 ~~~~--~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la 392 (448)
+..+ .++.+||++++++++++.++++|+|||+|+++|++ +|++.+ ++.+++|||||||||||+.+|+++++++
T Consensus 628 ~~~n~~da~~~rd~~~e~~~~l~~~~~~l~ria~Dl~~~~~~e~g~i~~-~~~~~~gSSiMPqKrNP~~~E~ir~~~~-- 704 (887)
T PRK02186 628 PAPNSLDAVASRDGVLHFLSAMAAISTVLSRLAQDLQLWTTREFALVSL-PDALTGGSSMLPQKKNPFLLEFVKGRAG-- 704 (887)
T ss_pred CccCHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEC-CCccccccCCCCCCCCCcHHHHHHHHHH--
Confidence 5443 36799999999999999999999999999999875 899988 4578899999999999999999998555
Q ss_pred hHHHhhhhhhc---cccccc--cc-cccchHHHHHhHHH---HHHHHhhcccccccccc
Q 013159 393 NEDLSFLSMKL---PISRWQ--VR-SNLTLLLIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 393 ~~v~g~la~~L---~~s~~q--RD-l~~~~~~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
.+.|++...+ ....++ .| .++.+..++++++. .+.++..++..++|++|
T Consensus 705 -~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~ 762 (887)
T PRK02186 705 -VVAGALASASAALGKTPFSNSFEAGSPMNGPIAQACAAIEDAAAVLVLLIDGLEADQA 762 (887)
T ss_pred -HHhhHHHHHHHHHccCCcccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhCEECHH
Confidence 8888875544 123334 44 36677888888888 66688889999999876
No 31
>PRK00855 argininosuccinate lyase; Provisional
Probab=100.00 E-value=1.6e-56 Score=472.01 Aligned_cols=311 Identities=19% Similarity=0.150 Sum_probs=258.7
Q ss_pred cchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccH-HhHHHHHhhhCCcH-hHHHHHHHHHhcc
Q 013159 104 EYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDA-LEVKNIERVTNHDV-KAVEYFLKQKCQS 181 (448)
Q Consensus 104 e~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~-~~l~~~e~~t~hDv-~a~e~~L~~~~g~ 181 (448)
|..++++.+.+++||+.+++ +.|+||++.+++| .+.++++..... ..+ . ....++|+ .++|++|.+++|+
T Consensus 29 ~~~~~~~~~~~~~Aha~~l~---~~G~l~~~~a~~i---~~al~~i~~~~~~~~~-~-~~~~~~d~~~~ie~~l~~~~g~ 100 (459)
T PRK00855 29 DKRLAEEDIAGSIAHARMLA---KQGILSEEEAEKI---LAGLDEILEEIEAGKF-E-FSPELEDIHMAIEARLTERIGD 100 (459)
T ss_pred hHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHH---HHHHHHHHhhcccCCc-c-cCCCCCcHHHHHHHHHHHHhcc
Confidence 46688999999999999999 8999997655554 333333321100 011 0 01246788 9999999999984
Q ss_pred CcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccccCCCCcccchhhHHHH
Q 013159 182 QPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTTLGKEISV 261 (448)
Q Consensus 182 ~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~Q~A~PtTfG~~la~ 261 (448)
.+++||+|+||||+++|+++|++|+++.. +.+.|.+++++|.++|++|++|+|+||||+|||||||||||+++
T Consensus 101 ------~g~~iH~g~SrnD~~~Ta~~L~~r~~l~~-l~~~L~~l~~~L~~~A~~~~~t~m~GrTH~Q~A~P~T~G~~l~~ 173 (459)
T PRK00855 101 ------VGGKLHTGRSRNDQVATDLRLYLRDEIDE-IAELLLELQKALLDLAEEHADTIMPGYTHLQRAQPVTFGHHLLA 173 (459)
T ss_pred ------ccCcccCCCCHhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCEeecCcCCccceeecHHHHHHH
Confidence 67899999999999999999999999995 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCCCC--ccccchhHHHHHHHHH
Q 013159 262 FAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYV--TQIETHDYMAKLFYAF 336 (448)
Q Consensus 262 ~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~--~qi~~rD~~ael~~~l 336 (448)
|++.|.|+++||.++. ..+++||++|+.. .+| ..++.+++.|||..+..+ +++.+||+++++++++
T Consensus 174 ~~~~L~r~~~rL~~~~~~~~~~plGgaag~gt----~~~-----~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~e~~~~l 244 (459)
T PRK00855 174 YAEMLARDLERLRDARKRVNRSPLGSAALAGT----TFP-----IDRERTAELLGFDGVTENSLDAVSDRDFALEFLSAA 244 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcchhhhcCC----CCC-----cCHHHHHHHcCCCCCCCCHHHHHHccHHHHHHHHHH
Confidence 9999999999999986 5677788887532 233 247789999999985432 2678999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhhhc----c-ccccc
Q 013159 337 VRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSMKL----P-ISRWQ 409 (448)
Q Consensus 337 a~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~~L----~-~s~~q 409 (448)
+.++++|+|||+|+++|++ +|++.+ ++.+++||||||||+||+.+|+++++++ .+.|++...+ + .++|+
T Consensus 245 ~~la~~L~ria~Dl~l~ss~e~gei~~-p~~~~~gSSiMPqK~NP~~~E~i~~~a~---~~~g~~~~~~~~~~~~~~~~~ 320 (459)
T PRK00855 245 SLLMVHLSRLAEELILWSSQEFGFVEL-PDAFSTGSSIMPQKKNPDVAELIRGKTG---RVYGNLTGLLTVMKGLPLAYN 320 (459)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCeEeC-CCCCCCCcCCCCCCCCCHHHHHHHHHHH---HHHhhHHHHHHHhcCchHHhh
Confidence 9999999999999999986 688887 4566799999999999999999998554 8888775444 2 37899
Q ss_pred cccccchHHHHHhHHH---HHHHHhhcccccccccc
Q 013159 410 VRSNLTLLLIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 410 RDl~~~~~~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
||+++.+..+++++.. ...++..+...++|++|
T Consensus 321 rD~~~~~~~l~~~~~~~~~al~~~~~~l~~l~v~~~ 356 (459)
T PRK00855 321 RDLQEDKEPLFDAVDTLKLSLEAMAGMLETLTVNKE 356 (459)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 9999999999888887 66678889999999876
No 32
>PRK13353 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=1.3e-56 Score=473.78 Aligned_cols=319 Identities=18% Similarity=0.121 Sum_probs=253.4
Q ss_pred cchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCccc---HHhHHHHHhhh----CCcHhHHHHHHH
Q 013159 104 EYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDD---ALEVKNIERVT----NHDVKAVEYFLK 176 (448)
Q Consensus 104 e~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d---~~~l~~~e~~t----~hDv~a~e~~L~ 176 (448)
..+++++|++||+||+++++ +.|+||++.+++|.+....+.+-...| ++.+.+.+.++ +|+|++ +++.
T Consensus 42 ~~~~i~a~~~ve~A~a~~l~---~~Glip~~~a~~I~~al~~i~~~~~~d~f~~~~~~~~~~~~~~~n~~~vi~--~~l~ 116 (473)
T PRK13353 42 HPELIRAFAQVKKAAALANA---DLGLLPRRIAEAIVQACDEILAGKLHDQFIVDPIQGGAGTSTNMNANEVIA--NRAL 116 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHhccccCCCCcchhhccccchhcchhhHHHH--HHHH
Confidence 36799999999999999999 899999877777643222211001112 33333333343 444444 8899
Q ss_pred HHhccCcchhhccC--------ccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccccCC
Q 013159 177 QKCQSQPEIAKVLE--------FFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQ 248 (448)
Q Consensus 177 ~~~g~~~~l~~~~~--------~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~Q 248 (448)
+++|+ +.++ +||+|+||||+++|+++|++|+++.. +.+.|.+++++|.++|++|++++|+||||+|
T Consensus 117 e~~g~-----~~g~~~~~hp~d~vH~GrSrnD~v~Ta~~L~~r~~l~~-l~~~L~~l~~~L~~~A~~~~~~im~GrTH~Q 190 (473)
T PRK13353 117 ELLGG-----EKGDYHYVSPNDHVNMAQSTNDVFPTAIRIAALNLLEG-LLAAMGALQDVFEEKAAEFDHVIKMGRTQLQ 190 (473)
T ss_pred HHhCc-----cccCCccCCcccCccCCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeeccccCc
Confidence 99985 2566 49999999999999999999999995 9999999999999999999999999999999
Q ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccc-cccccccccccCCCCChhhhHHHHHHHcCCCCCCCC---c
Q 013159 249 PASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAG-AVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYV---T 321 (448)
Q Consensus 249 ~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gG-AvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~---~ 321 (448)
||+|||||||+++|+++|.|+++||.++. ..+++|| |+||..... ++.. .++.+++++.|||+.++.. +
T Consensus 191 ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg~AvGT~~~~~---~~~~-~~~~~~la~~LG~~~~~~~n~~~ 266 (473)
T PRK13353 191 DAVPITLGQEFSAYARALKRDRKRIQQAREHLYEVNLGGTAVGTGLNAD---PEYI-ERVVKHLAAITGLPLVGAEDLVD 266 (473)
T ss_pred cceeecHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccccCCccCC---hhHH-HHHHHHHHHHhCCCCccccchHh
Confidence 99999999999999999999999999985 5666776 899943221 1111 3567789999999965432 2
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhhhhhh-----hccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHH
Q 013159 322 QIETHDYMAKLFYAFVRFNNILIDFDRDVWGYI-----SLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDL 396 (448)
Q Consensus 322 qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~-----s~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~ 396 (448)
++++||++++++++++.++++|+|||+||++|+ ++|++.+ +.+++|||||||||||+.+|.++++ |+++.
T Consensus 267 a~~~rD~~~e~~~~la~la~~l~riA~Dl~llss~pr~e~gev~l--p~~~~GSSiMPqKrNP~~~E~ir~~---a~~v~ 341 (473)
T PRK13353 267 ATQNTDAFVEVSGALKVCAVNLSKIANDLRLLSSGPRTGLGEINL--PAVQPGSSIMPGKVNPVMPEVVNQI---AFQVI 341 (473)
T ss_pred hhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCceEEEC--CCCCCCCCCCCCCcCChHHHHHHHH---HHHHH
Confidence 568999999999999999999999999999998 5788876 3389999999999999999999984 55888
Q ss_pred hhhhhhc-----cccccccccccchHHHHHhHHH---HHHHHh-hcccccccccc
Q 013159 397 SFLSMKL-----PISRWQVRSNLTLLLIFFNFDL---WLCLLR-QVPWYLKFKSD 442 (448)
Q Consensus 397 g~la~~L-----~~s~~qRDl~~~~~~~~~~~~~---~~~ll~-~~~~~~~~~~~ 442 (448)
|++...+ ..++++++.+..++.+|..++. ....+. .++..++|++|
T Consensus 342 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~vn~e 396 (473)
T PRK13353 342 GNDVTITLAAEAGQLELNVMEPVIAFNLLESISILTNACRAFTDNCVKGIEANEE 396 (473)
T ss_pred hHHHHHHHHHHcCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 8875544 1466788888888889999855 333333 68888888876
No 33
>TIGR00979 fumC_II fumarate hydratase, class II. Putative fumarases from several species (Mycobacterium tuberculosis, Streptomyces coelicolor, Pseudomonas aeruginosa) branch deeply, although within the same branch of a phylogenetic tree rooted by aspartate ammonia-lyase sequences, and score between the trusted and noise cutoffs.
Probab=100.00 E-value=8.9e-57 Score=473.12 Aligned_cols=317 Identities=22% Similarity=0.170 Sum_probs=252.7
Q ss_pred chhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCccc---HHhHHHHHhhhC-----CcHhHHHHHHH
Q 013159 105 YGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDD---ALEVKNIERVTN-----HDVKAVEYFLK 176 (448)
Q Consensus 105 ~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d---~~~l~~~e~~t~-----hDv~a~e~~L~ 176 (448)
..++++|++||.||+++|+ ++|+||++.+++|.+-+..+..-. .| +..+.+.++.++ |+|+++ .|.
T Consensus 39 ~~~i~a~~~ve~A~a~a~~---~~Giip~~~a~~I~~a~~~i~~~~-~~~~~~~~~~~~~~~~~~~m~~~~via~--~l~ 112 (458)
T TIGR00979 39 LELIHAFAILKKAAAIVNE---DLGKLDAKKADAIVQAADEILAGK-LDDHFPLVVWQTGSGTQSNMNVNEVIAN--RAI 112 (458)
T ss_pred HHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHhcc-ccCCCceecccccccccccccHHHHHHH--HHH
Confidence 6799999999999999999 899999877777643222211101 12 344556666777 777776 889
Q ss_pred HHhccCcchhhc--cCccc------cCCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcccceeeccccC
Q 013159 177 QKCQSQPEIAKV--LEFFH------FACTSEDINNLAHALMLKEAI-NKVMFPVMDKLIKALCEIAKDNANISMLSRTHG 247 (448)
Q Consensus 177 ~~~g~~~~l~~~--~~~vH------~G~TsnDi~dTa~~L~lr~al-~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~ 247 (448)
+++|. +. ++||| +|+|||||++|+++|++|+++ .. +.+.|.+++++|.++|++|++++|+||||+
T Consensus 113 e~~g~-----~~g~~~~vH~~d~vn~G~S~nDiv~Ta~~L~lr~~l~~~-l~~~l~~l~~~L~~~A~~~~dt~m~GrTH~ 186 (458)
T TIGR00979 113 ELLGG-----KLGSKQPVHPNDHVNKSQSSNDTFPTAMHIAAVLAIKNQ-LIPALENLKKTLDAKSKEFAHIVKIGRTHL 186 (458)
T ss_pred HHcCc-----ccCCCceeCCCCCCCCCCCcccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHccCCeeeccccc
Confidence 99974 24 45699 799999999999999999999 55 999999999999999999999999999999
Q ss_pred CCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccc-cccccccccccCCCCChhhhHHHHHHHcCCCCCCCC---
Q 013159 248 QPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAG-AVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYV--- 320 (448)
Q Consensus 248 Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gG-AvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~--- 320 (448)
|||+|||||+|+++|+++|.|+++||.+++ ..+++|| |+||..... ++++ +++.+++++.|||+.++..
T Consensus 187 Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~---~~~~-~~v~~~~a~~LGl~~~~~~n~~ 262 (458)
T TIGR00979 187 QDATPLTLGQEFSGYVAQLEHGLERIAYSLPHLYELAIGGTAVGTGLNTH---PGFD-EKVAEEIAKETGLPFVTAPNKF 262 (458)
T ss_pred ccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhcCCccCC---hhHH-HHHHHHHHHHhCCCCeecCcHH
Confidence 999999999999999999999999999985 5677777 899954332 1111 4577889999999985544
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhh-----hccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHH
Q 013159 321 TQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYI-----SLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANED 395 (448)
Q Consensus 321 ~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~-----s~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v 395 (448)
.++.+||++++++++++.++++|+|||+||++|+ ++|++.+ +.+++||||||||+||+.+|++++ +|+.+
T Consensus 263 ~~~~~rD~~~e~~~~La~la~~L~kia~Dl~llss~~~~e~gev~~--p~~~~GSSiMP~K~NP~~~E~i~~---~a~~v 337 (458)
T TIGR00979 263 EALAAHDAIVEAHGALKTLAASLMKIANDIRWLGSGPRCGLGELFI--PENEPGSSIMPGKVNPTQCEALTM---VCVQV 337 (458)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCceeEEC--CCCCCCCCCCCCCcCCHHHHHHHH---HHHHH
Confidence 2568999999999999999999999999999998 3788776 348999999999999999999987 56699
Q ss_pred Hhhhhhhcc-ccccccccccchHH----HHHhHHH---HHHHHh-hcccccccccc
Q 013159 396 LSFLSMKLP-ISRWQVRSNLTLLL----IFFNFDL---WLCLLR-QVPWYLKFKSD 442 (448)
Q Consensus 396 ~g~la~~L~-~s~~qRDl~~~~~~----~~~~~~~---~~~ll~-~~~~~~~~~~~ 442 (448)
.|++...+. ...++.+++.+++. ++..+.. ...++. .+...++|++|
T Consensus 338 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~v~~e 393 (458)
T TIGR00979 338 MGNDATIGFAGSQGNFELNVFKPVIIYNFLQSVRLLSDAMESFRDHCVVGIEPNKE 393 (458)
T ss_pred HhhHHHHHHHHHhccchhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 998765553 35678888888888 4444444 122222 46667777765
No 34
>cd01362 Fumarase_classII Class II fumarases. This subgroup contains Escherichia coli fumarase C, human mitochondrial fumarase, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=6.1e-56 Score=466.64 Aligned_cols=325 Identities=19% Similarity=0.148 Sum_probs=246.3
Q ss_pred cchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHH-cc-CCcccHHhHHHHHhhhC-----CcHhHHHHHHH
Q 013159 104 EYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLI-DG-FNMDDALEVKNIERVTN-----HDVKAVEYFLK 176 (448)
Q Consensus 104 e~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~-~~-~~~~d~~~l~~~e~~t~-----hDv~a~e~~L~ 176 (448)
++.+++.|++||.||+++|+ ++|+||+..+++|......+ +. ++..=+..+.+....++ |++++ .+.+
T Consensus 37 ~~~~i~~~l~ve~A~a~al~---~~GiIp~~~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~--~~~~ 111 (455)
T cd01362 37 PRELIRALGLLKKAAAQANA---ELGLLDEEKADAIVQAADEVIAGKLDDHFPLVVWQTGSGTQTNMNVNEVIA--NRAI 111 (455)
T ss_pred CHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHhcccccCCceehhhccccccccccHHHHHH--HHHH
Confidence 46789999999999999999 89999987777764322222 21 21000223333344444 44433 3444
Q ss_pred HHhccCcc---hhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccccCCCCccc
Q 013159 177 QKCQSQPE---IAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPT 253 (448)
Q Consensus 177 ~~~g~~~~---l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~Q~A~Pt 253 (448)
++.|+... ..+.++|||+|+|||||++|+++|++|+++..++.+.+.+++++|.++|++|++++|+||||+||||||
T Consensus 112 ~~~g~~~g~~~~~~~~~~vH~G~SrnDiv~Ta~~L~lr~~l~~~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~ 191 (455)
T cd01362 112 ELLGGVLGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAALALQERLLPALKHLIDALDAKADEFKDIVKIGRTHLQDATPL 191 (455)
T ss_pred HhcCcccCCcCcCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCCCCeee
Confidence 55452100 003588999999999999999999999999546999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhH---hhhcccc-cccccccccccCCCCChhhhHHHHHHHcCCCCCCCCc---cccch
Q 013159 254 TLGKEISVFAIRLGRERQEISQVE---IMGKFAG-AVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVT---QIETH 326 (448)
Q Consensus 254 TfG~~la~~~~~L~r~~~rL~~~~---~lg~~gG-AvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~---qi~~r 326 (448)
|||||+++|+++|.|+++||.+++ ..+++|| |+||..+....| -+.+.+++++.|||..++..+ ++.+|
T Consensus 192 TfG~~~~~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~----~~~v~~~~a~~LGl~~~~~~n~~da~~~r 267 (455)
T cd01362 192 TLGQEFSGYAAQLEHAIARIEAALPRLYELALGGTAVGTGLNAHPGF----AEKVAAELAELTGLPFVTAPNKFEALAAH 267 (455)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcCCeeccCCccCChhH----HHHHHHHHHHHhCCCCccCCCHHHHHhCC
Confidence 999999999999999999999986 5777876 899954332111 135778999999999755433 45889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhh-----hccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhh
Q 013159 327 DYMAKLFYAFVRFNNILIDFDRDVWGYI-----SLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSM 401 (448)
Q Consensus 327 D~~ael~~~la~i~~~L~kia~Di~l~~-----s~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~ 401 (448)
|++++++++++.++++|+|||+|+++|+ ++|++.+ +.+++||||||||+||+.+|++++ +++.+.|++..
T Consensus 268 D~~~e~~~~l~~la~~l~ria~Dl~~~~s~~~~e~gev~~--~~~~~GSS~MPqKrNP~~~E~ir~---~a~~~~g~~~~ 342 (455)
T cd01362 268 DALVEASGALKTLAVSLMKIANDIRWLGSGPRCGLGELSL--PENEPGSSIMPGKVNPTQCEALTM---VAAQVMGNDAA 342 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCCceEEC--CCCCCCCCCCCCCCCcHHHHHHHH---HHHHHhhhHHH
Confidence 9999999999999999999999999998 3788876 347999999999999999999998 45588887755
Q ss_pred hcc---c--cccccccccchHHHHHhHHH----HHHHHhhcccccccccc
Q 013159 402 KLP---I--SRWQVRSNLTLLLIFFNFDL----WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 402 ~L~---~--s~~qRDl~~~~~~~~~~~~~----~~~ll~~~~~~~~~~~~ 442 (448)
.+. . ..++.|.+.....++..+.. ...+...+...++|++|
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~v~~~ 392 (455)
T cd01362 343 ITIAGSSGNFELNVFKPVIIYNLLQSIRLLADACRSFADKCVAGIEPNRE 392 (455)
T ss_pred HHHHHhcCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 542 2 22345555445566666666 22233477888888876
No 35
>PRK06389 argininosuccinate lyase; Provisional
Probab=100.00 E-value=6.7e-56 Score=460.88 Aligned_cols=321 Identities=17% Similarity=0.179 Sum_probs=261.4
Q ss_pred CCCccCCCCcc-c-hHHhcc-----cchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHH
Q 013159 86 PLDGRYWSKVK-D-LAPYMS-----EYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVK 158 (448)
Q Consensus 86 p~dgry~~~~~-e-l~~ifS-----e~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~ 158 (448)
.|+|||...++ + +..+++ |..++++.+.+.+||+.+|+ +.|+||++.+..+ .+.+.++.. ..+
T Consensus 3 lw~gr~~~~~~~~~~~~~~~~s~~~D~~l~~~di~~~~AH~~mL~---~~gii~~~e~~~i---~~~L~~i~~---~~~- 72 (434)
T PRK06389 3 IWSGGAGEELENDFYDNIVKDDIDADKNLIKYEIINLLAYHVALA---QRRLITEKAPKCV---INALIDIYK---NGI- 72 (434)
T ss_pred CcccccCCCCchHHHHHHHCCCHHHHHHHHHHHHHHhHHHHHHHH---HCCCCCHHHHHHH---HHHHHHHHc---CCC-
Confidence 79999998655 4 333322 55678888888999999999 8999997555444 333333311 000
Q ss_pred HHHhhhCCcH-hHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 013159 159 NIERVTNHDV-KAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNA 237 (448)
Q Consensus 159 ~~e~~t~hDv-~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~ 237 (448)
+ .....+|+ .++|++|.+++|+ +++++|+||||||++.|+++|++|+.+.. +...+.+++++|.++ |.
T Consensus 73 ~-~~~~~EDvh~~iE~~L~~~~G~------~gg~lhtgRSRNDqvat~~RL~~r~~~~~-~~~~l~~l~~~l~~~---~~ 141 (434)
T PRK06389 73 E-IDLDLEDVHTAIENFVIRRCGD------MFKNFRLFLSRNEQVHADLNLFIIDKIIE-IEKILYEIIKVIPGF---NL 141 (434)
T ss_pred c-CCCCCCchHHHHHHHHHHHhch------hhhhhcccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH---cc
Confidence 0 11234699 9999999999996 89999999999999999999999999996 999999999999965 99
Q ss_pred cceeeccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhH------hhhcccccccccccccccCCCCChhhhHHHHHHH
Q 013159 238 NISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVE------IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKS 311 (448)
Q Consensus 238 dt~m~gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~------~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~ 311 (448)
|++||||||+|||||+|||||+++|++.|.|+++||.++. |+|. ||++||. +| + .++++|++
T Consensus 142 dtimpGyTHlQ~AqP~TfG~~l~a~a~~L~rd~~RL~~~~~r~~~~pLGa-ga~~Gt~------~~-i----dr~~~A~l 209 (434)
T PRK06389 142 KGRLPGYTHFRQAMPMTVNTYINYIKSILYHHINNLDSFLMDLREMPYGY-GSGYGSP------SS-V----KFNQMSEL 209 (434)
T ss_pred CceeccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhh-hhhhcCC------ch-h----hHHHHHHH
Confidence 9999999999999999999999999999999999999985 4542 5566773 22 2 47889999
Q ss_pred cCCCCC---CCCccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccceeeecCCCCcccCCCCCCcCchHHHHhhhh
Q 013159 312 LGLSFN---PYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGN 388 (448)
Q Consensus 312 LGL~~~---~~~~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~ 388 (448)
|||+.+ +...+...+|.+++++++++.++++|+|||+|+++|++.|++++ ++..++|||||||||||+.+|.++++
T Consensus 210 LGf~~~~~n~~~a~~~~~~~~~e~~~~la~la~~LsRiA~Dl~l~ss~g~iel-pd~~~~GSSiMPqKrNP~~~E~ir~~ 288 (434)
T PRK06389 210 LGMEKNIKNPVYSSSLYIKTIENISYLISSLAVDLSRICQDIIIYYENGIITI-PDEFTTGSSLMPNKRNPDYLELFQGI 288 (434)
T ss_pred hCCCCCCCCCchhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEe-cCCCCCCCCCCCCCcCcHHHHHHHHH
Confidence 999983 33223344555889999999999999999999999999899987 56778999999999999999999986
Q ss_pred hhhhhHHHhhhhhhc-----cccccccccccchHHHHHhHHH---HHHHHhhccccccccccc
Q 013159 389 LGKANEDLSFLSMKL-----PISRWQVRSNLTLLLIFFNFDL---WLCLLRQVPWYLKFKSDL 443 (448)
Q Consensus 389 ~~la~~v~g~la~~L-----~~s~~qRDl~~~~~~~~~~~~~---~~~ll~~~~~~~~~~~~~ 443 (448)
++ ++.|.++..+ ..++|+||+|+.++.+|.++++ .+.++..++..++|++|-
T Consensus 289 a~---~v~g~~~~~~~~~~n~~~~y~~D~q~~~~~~~~~~~~~~~~l~l~~~~i~~l~~~~~~ 348 (434)
T PRK06389 289 AA---ESISVLSFIAQSELNKTTGYHRDFQIVKDSTISFINNFERILLGLPDLLYNIKFEITN 348 (434)
T ss_pred HH---HHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeECHHH
Confidence 65 7777764333 1479999999999999999999 666899999999997764
No 36
>TIGR00839 aspA aspartate ammonia-lyase. Fumarate hydratase scores as high as 570 bits against this model.
Probab=100.00 E-value=3.1e-55 Score=462.15 Aligned_cols=320 Identities=18% Similarity=0.157 Sum_probs=249.6
Q ss_pred ccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHH-HHHccCCcccHHhHHHHHhhhC-------CcHhHHHHH
Q 013159 103 SEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQ-GLIDGFNMDDALEVKNIERVTN-------HDVKAVEYF 174 (448)
Q Consensus 103 Se~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~-~~~~~~~~~d~~~l~~~e~~t~-------hDv~a~e~~ 174 (448)
..++++++|++||.||+++|+ ++|+||++.+++|.+.. ..++.-...+...+......+| |+|++ ..
T Consensus 38 ~~~~~i~~~l~ve~A~a~al~---e~GiIp~~~a~~I~~al~~~~d~~~~~~~~~l~~~~~~~g~~~~~~v~~vie--~~ 112 (468)
T TIGR00839 38 DIPEFVRGMVMVKKAAALANK---ELGTIPESIANAIVAACDEILNNGKCHDQFPVDVYQGGAGTSVNMNTNEVIA--NL 112 (468)
T ss_pred chHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHhcccccccccccHHHccCccccccchHHHHH--HH
Confidence 347899999999999999999 89999987777775322 2111000012345566666777 44444 44
Q ss_pred HHHHhccCcchhhccCcccc--------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeecccc
Q 013159 175 LKQKCQSQPEIAKVLEFFHF--------ACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTH 246 (448)
Q Consensus 175 L~~~~g~~~~l~~~~~~vH~--------G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH 246 (448)
|.+++|. +.++|+|+ |+||||+++|+++|++|+++.. +.+.|.+++++|.++|++|++++|+||||
T Consensus 113 l~e~~g~-----~~g~~~H~~p~~~v~~G~S~nD~v~Ta~~L~lr~~l~~-l~~~l~~l~~~L~~~A~~~~~t~m~grTH 186 (468)
T TIGR00839 113 ALELMGH-----QKGEYQYLNPNDHVNKSQSTNDAYPTGFRIAVYSSLIK-LVDAINQLRDGFEQKAKEFADILKMGRTQ 186 (468)
T ss_pred HHHHhCc-----cccCeeecCCCCCCCCCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHccCCeeecccc
Confidence 8999974 37899995 9999999999999999999995 99999999999999999999999999999
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccc-cccccccccccCCCCChhhhHHHHHHHcCCCCCCCC--
Q 013159 247 GQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAG-AVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYV-- 320 (448)
Q Consensus 247 ~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gG-AvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~-- 320 (448)
+|||||||||+|+++|+++|.|+++||.++. ..+++|| |+||..+.. ++. -+.+++++++.|||+.++..
T Consensus 187 ~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~---~~~-~~~v~~~~a~~LGl~~~~~~n~ 262 (468)
T TIGR00839 187 LQDAVPMTLGQEFEAFSILLEEEVKNIKRTAELLLEVNLGATAIGTGLNTP---PEY-SPLVVKKLAEVTGLPCVPAENL 262 (468)
T ss_pred CccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcceeCCCcCC---hhH-HHHHHHHHHHHhCCCCCCCccH
Confidence 9999999999999999999999999999985 5666776 899853321 111 24688999999999986432
Q ss_pred -ccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh-----ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhH
Q 013159 321 -TQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS-----LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANE 394 (448)
Q Consensus 321 -~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s-----~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~ 394 (448)
.++.+||++++++++++.++++|+|||+|+++|+| +|++.+ +.+++||||||||+||+.+|.+++ +|+.
T Consensus 263 ~da~~~rd~~~e~~~~l~~la~~L~ria~Dl~l~~s~~~~~~~ev~~--~~~~~gSS~MPqKrNP~~~E~ir~---~a~~ 337 (468)
T TIGR00839 263 IEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINL--PELQAGSSIMPAKVNPVVPEVVNQ---VCFK 337 (468)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCceEEeC--CCCCCCCCCCCCCcCcHHHHHHHH---HHHH
Confidence 24578999999999999999999999999999984 455665 468999999999999999999987 5558
Q ss_pred HHhhhhhhcc-cccccccccc----chHHHHHhHHH---HH-HHHhhcccccccccc
Q 013159 395 DLSFLSMKLP-ISRWQVRSNL----TLLLIFFNFDL---WL-CLLRQVPWYLKFKSD 442 (448)
Q Consensus 395 v~g~la~~L~-~s~~qRDl~~----~~~~~~~~~~~---~~-~ll~~~~~~~~~~~~ 442 (448)
+.|+++..+. ....+.+.+. ..+.+|.++.. .. .+...+...++|++|
T Consensus 338 ~~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~vn~e 394 (468)
T TIGR00839 338 VIGNDTTVTLAAEAGQLQLNVMEPVIGQAMFESIHILTNACYNLTDKCVNGITANKE 394 (468)
T ss_pred HHhHHHHHHHHHhcCChHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 8888766522 1112222222 24556666676 22 246678899999876
No 37
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. This group contains aspartase (L-aspartate ammonia-lyase), fumarase class II enzymes, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=1.7e-54 Score=455.02 Aligned_cols=316 Identities=21% Similarity=0.162 Sum_probs=240.9
Q ss_pred cchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCc--cc---HHhHHHHHhhhCCcH-hHHHH----
Q 013159 104 EYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNM--DD---ALEVKNIERVTNHDV-KAVEY---- 173 (448)
Q Consensus 104 e~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~--~d---~~~l~~~e~~t~hDv-~a~e~---- 173 (448)
+++++++|++||.||+++|+ +.|+||++.+++|.. .+..+.. .| ...+.+.... .|+ .+++.
T Consensus 37 ~~~~i~~~l~ve~A~a~al~---~~Giip~~~a~~I~~---~l~~i~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~i~~ 108 (450)
T cd01596 37 PPELIRALALVKKAAALANA---ELGLLDEEKADAIVQ---ACDEVIAGKLDDQFPLDVWQTGSG--TSTNMNVNEVIAN 108 (450)
T ss_pred CHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHH---HHHHHHcCcccCCCcccHHhccCc--ccccchHHHHHHH
Confidence 46799999999999999999 899999877776643 3322210 11 1122222222 232 33332
Q ss_pred HHHHHhccCcchhhccCc--------cccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccc
Q 013159 174 FLKQKCQSQPEIAKVLEF--------FHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRT 245 (448)
Q Consensus 174 ~L~~~~g~~~~l~~~~~~--------vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRT 245 (448)
++.+++|+ ..++| +|+|+|||||++|+++|++|+++.. +.+.|.+++++|.++|++|++++|||||
T Consensus 109 ~~~~~~g~-----~~g~~~~h~~~~v~h~g~SrnD~v~t~~~L~lr~~l~~-l~~~l~~l~~~L~~lA~~~~~t~m~grT 182 (450)
T cd01596 109 RALELLGG-----KKGKYPVHPNDDVNNSQSSNDDFPPAAHIAAALALLER-LLPALEQLQDALDAKAEEFADIVKIGRT 182 (450)
T ss_pred HHHHHhcc-----ccCCcccCCCcccCCCCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeeccc
Confidence 34466663 24677 6799999999999999999999995 9999999999999999999999999999
Q ss_pred cCCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccc-cccccccccccCCCCChhhhHHHHHHHcCCCCCCCC-
Q 013159 246 HGQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAG-AVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYV- 320 (448)
Q Consensus 246 H~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gG-AvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~- 320 (448)
|+|+|||||||||+++|+++|.|+++||..+. ..+++|| |+||..+....+ -+.+.+++++.|||+.++..
T Consensus 183 H~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGg~A~Gt~~~~~~~~----~~~v~~~~a~~LGl~~~~~~n 258 (450)
T cd01596 183 HLQDAVPLTLGQEFSGYAAQLARDIARIEAALERLRELNLGGTAVGTGLNAPPGY----AEKVAAELAELTGLPFVTAPN 258 (450)
T ss_pred cccCCeeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcceeCCCCCChhH----HHHHHHHHHHHhCCCCccCcC
Confidence 99999999999999999999999999999985 5677776 899853321111 14678899999999964433
Q ss_pred --ccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhh-----hccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhh
Q 013159 321 --TQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYI-----SLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKAN 393 (448)
Q Consensus 321 --~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~-----s~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~ 393 (448)
+++.+||+++++++++++++++|+|||+|+++|+ ++|++.++ .+++|||||||||||+.+|++++ +|+
T Consensus 259 ~~d~~~~rd~~~e~~~~la~~~~~l~ria~Dl~~~ss~~~~e~gev~~~--~~~~GSS~MPqKrNP~~~E~ir~---~a~ 333 (450)
T cd01596 259 LFEATAAHDALVEVSGALKTLAVSLSKIANDLRLLSSGPRAGLGEINLP--ANQPGSSIMPGKVNPVIPEAVNM---VAA 333 (450)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCeeEECC--CCCCCCCCCCCCCCCHHHHHHHH---HHH
Confidence 3678999999999999999999999999999998 37888773 38999999999999999999998 555
Q ss_pred HHHhhhhhhc---cccccccccccc--hHHHHHhHHH---HHHH-Hhhcccccccccc
Q 013159 394 EDLSFLSMKL---PISRWQVRSNLT--LLLIFFNFDL---WLCL-LRQVPWYLKFKSD 442 (448)
Q Consensus 394 ~v~g~la~~L---~~s~~qRDl~~~--~~~~~~~~~~---~~~l-l~~~~~~~~~~~~ 442 (448)
.+.|+++..+ ....++|....+ ...++..+.. ...+ ...+...++|++|
T Consensus 334 ~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~v~~~ 391 (450)
T cd01596 334 QVIGNDTAITMAGSAGQLELNVFKPVIAYNLLQSIRLLANACRSFRDKCVEGIEANEE 391 (450)
T ss_pred HHhccHHHHHHHhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 9999876555 234555532221 1225565555 2223 3378888888876
No 38
>KOG1316 consensus Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.6e-55 Score=429.22 Aligned_cols=328 Identities=20% Similarity=0.197 Sum_probs=277.6
Q ss_pred cCCCCCccCCCCccchHHhcccch-----hhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhH
Q 013159 83 ALSPLDGRYWSKVKDLAPYMSEYG-----LIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEV 157 (448)
Q Consensus 83 ~~sp~dgry~~~~~el~~ifSe~~-----~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l 157 (448)
....|+|||...+.++..-|.+.- +++.-++--.|++.+|. +.|+|.. .+.+.|.+-++.+.. +++.-
T Consensus 5 ~~KlWGGRFtg~~dp~m~~fn~Si~ydk~ly~~Dv~gSkaya~~L~---~~glit~---~e~dkil~gLe~i~~-ew~~~ 77 (464)
T KOG1316|consen 5 SQKLWGGRFTGAVDPLMEKFNASIPYDKRLYEADVDGSKAYAKALE---KAGLITE---AELDKILKGLEKIRR-EWAAG 77 (464)
T ss_pred chhhhccccCCCCCHHHHHhhccCccchHHHHhhhhhhHHHHHHHH---HcCCCcH---HHHHHHHHHHHHHHH-HHhcC
Confidence 356799999999999988886655 44444555689999999 8999984 565556554444321 22221
Q ss_pred HHHHhhhCCcH-hHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 013159 158 KNIERVTNHDV-KAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDN 236 (448)
Q Consensus 158 ~~~e~~t~hDv-~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~ 236 (448)
+-.-....+|| .+.|+.|.+.+|+ .++++|+||||||++.|.++||+|+++.. +.-.+..|++++.++|+.+
T Consensus 78 kf~~~p~dEDvHtanErrL~eliG~------~agKlHTgRSRNDQV~TDlRLw~r~~i~~-~~~~l~~L~~~~v~rAe~~ 150 (464)
T KOG1316|consen 78 KFKLNPNDEDVHTANERRLTELIGE------IAGKLHTGRSRNDQVVTDLRLWLRDAIDT-ILGLLWNLIRVLVDRAEAE 150 (464)
T ss_pred ceEeCCCchhhhhHHHHHHHHHHhh------hhhhcccCccccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhc
Confidence 11223456799 9999999999996 89999999999999999999999999996 8888889999999999999
Q ss_pred ccceeeccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhH------hhhcccccc-cccccccccCCCCChhhhHHHHH
Q 013159 237 ANISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVE------IMGKFAGAV-GNYNAHLSAYPDVNWPQITEDFV 309 (448)
Q Consensus 237 ~dt~m~gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~------~lg~~gGAv-GT~~a~~~~~p~~d~~~v~~~la 309 (448)
.+++||||||+|.|||+.|.||+..++..|.|+..||.+++ |+| +||. || .++ +| ++-++
T Consensus 151 ~dvlmpGYTHLQRAQpvrwsH~LlSha~~l~~D~~Rl~q~~~R~n~~PLG--agALAGn------pl~-iD----R~~la 217 (464)
T KOG1316|consen 151 LDVLMPGYTHLQRAQPVRWSHWLLSHAEQLTRDLGRLVQIRKRLNQLPLG--AGALAGN------PLG-ID----REFLA 217 (464)
T ss_pred cCeeccChhhhhhccCchhHHHHHHHHHHHHhHHHHHHHHHHHhccCCcc--cchhcCC------CCC-cc----HHHHH
Confidence 99999999999999999999999999999999999999995 566 3664 66 233 44 55678
Q ss_pred HHcCCCC---CCCCccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHH
Q 013159 310 KSLGLSF---NPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFEN 384 (448)
Q Consensus 310 ~~LGL~~---~~~~~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~ 384 (448)
+.|||.. |+. ++++.||+++|++.|.++++.+|+|+|+|+.+|++ |||+.+ .+++.+|||+||||+||+.+|.
T Consensus 218 ~~LgF~~v~~NSm-~AvsDRDFVvef~fw~sm~m~HlSRlaEdlIiy~t~EF~Fv~l-SDaySTGSSlMPQKKNpDslEL 295 (464)
T KOG1316|consen 218 EELGFEGVIMNSM-DAVSDRDFVVEFLFWASMVMTHLSRLAEDLIIYSTKEFGFVTL-SDAYSTGSSLMPQKKNPDSLEL 295 (464)
T ss_pred HhcCCcccchhhh-hccccchhHHHHHHHHHHHHHHHHHHhhHhheeeccccCceee-ccccccCcccCCCCCCCCHHHH
Confidence 9999998 455 47999999999999999999999999999999974 999987 7889999999999999999999
Q ss_pred hhhhhhhhhHHHhhhhhhcc-----ccccccccccchHHHHHhHHH---HHHHHhhcccccccccc
Q 013159 385 SEGNLGKANEDLSFLSMKLP-----ISRWQVRSNLTLLLIFFNFDL---WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 385 ~~g~~~la~~v~g~la~~L~-----~s~~qRDl~~~~~~~~~~~~~---~~~ll~~~~~~~~~~~~ 442 (448)
+||+.| +|+|.+.+.|. ++.|++|+|++|+++|+++++ +..+..+|..++-||+|
T Consensus 296 lRgksg---rV~gdl~g~lmt~KG~PstYnkDlQeDKep~Fds~~tv~~~l~v~tgv~stltvn~e 358 (464)
T KOG1316|consen 296 LRGKSG---RVFGDLTGLLMTLKGLPSTYNKDLQEDKEPLFDSSKTVSDSLQVATGVISTLTVNQE 358 (464)
T ss_pred hccccc---eehhhhHHHHHHhcCCccccccchhhhhhHHHhhHHHHHHHHHHHHHHhhheeECHH
Confidence 999877 99998866552 599999999999999999999 77789999999999876
No 39
>PLN00134 fumarate hydratase; Provisional
Probab=100.00 E-value=8.6e-54 Score=450.53 Aligned_cols=317 Identities=18% Similarity=0.101 Sum_probs=242.5
Q ss_pred chhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcc---cHHhHHH----HHhhhCCcH-hHHHHHHH
Q 013159 105 YGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMD---DALEVKN----IERVTNHDV-KAVEYFLK 176 (448)
Q Consensus 105 ~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~---d~~~l~~----~e~~t~hDv-~a~e~~L~ 176 (448)
..+++.++.|+.||++|+. +.|+||++.+++|. +.++++... +.-.+.. .-..++.|| ..+|.++.
T Consensus 34 ~~~i~a~~~v~~A~a~~l~---~~G~l~~~~a~~I~---~al~ei~~~~~~~~f~~~~~~~g~g~~~~~~v~evie~~l~ 107 (458)
T PLN00134 34 EPIVRAFGIVKKAAAKVNM---EYGLLDPDIGKAIM---QAADEVAEGKLDDHFPLVVWQTGSGTQTNMNANEVIANRAA 107 (458)
T ss_pred HHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHH---HHHHHHHcCcccCCccccccccCCcccccCcHHHHHHHHHH
Confidence 6699999999999999999 89999976666653 333332111 0000111 111235677 78999999
Q ss_pred HHhccCcchhhccCc--cc------cCCChhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcccceeeccccC
Q 013159 177 QKCQSQPEIAKVLEF--FH------FACTSEDINNLAHALMLKEA-INKVMFPVMDKLIKALCEIAKDNANISMLSRTHG 247 (448)
Q Consensus 177 ~~~g~~~~l~~~~~~--vH------~G~TsnDi~dTa~~L~lr~a-l~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~ 247 (448)
+++|. +.++| +| +|+||||+++|+++|++|+. +. .+.+.|.+++++|.++|++|++++|+||||+
T Consensus 108 e~~g~-----~~g~~~~lHp~d~vh~G~S~nDiv~Ta~~L~~~~~~~~-~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~ 181 (458)
T PLN00134 108 EILGG-----PVGEKSPVHPNDHVNRSQSSNDTFPTAMHIAAATEIHS-RLIPALKELHESLRAKSFEFKDIVKIGRTHL 181 (458)
T ss_pred HHhCc-----ccCCccccCcccccCCCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence 99985 35666 66 99999999999999999954 76 4999999999999999999999999999999
Q ss_pred CCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccc-cccccccccccCCCCChhhhHHHHHHHcCCCCCCCCc--
Q 013159 248 QPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAG-AVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVT-- 321 (448)
Q Consensus 248 Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gG-AvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~-- 321 (448)
|+|+|||||+|+++|++.|.|+++||.++. ..+++|| ||||..... +++ -+.+.+++++.|||+.++..+
T Consensus 182 Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~---~~~-~~~v~~~la~~LGl~~~~~~n~~ 257 (458)
T PLN00134 182 QDAVPLTLGQEFSGYATQVKYGLNRVQCTLPRLYELAQGGTAVGTGLNTK---KGF-DEKIAAAVAEETGLPFVTAPNKF 257 (458)
T ss_pred CCCeeecHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCccCC---hhH-HHHHHHHHHHHhCCCCCCCccHH
Confidence 999999999999999999999999999985 5666776 899843221 111 146788999999999865443
Q ss_pred -cccchhHHHHHHHHHHHHHHHHHHHHHhhhhhh-----hccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHH
Q 013159 322 -QIETHDYMAKLFYAFVRFNNILIDFDRDVWGYI-----SLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANED 395 (448)
Q Consensus 322 -qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~-----s~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v 395 (448)
++.+||++++++++++.++++|+|||+|+++|+ ++|++.+ +..++||||||||+||+.+|.+++ +|+++
T Consensus 258 da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~p~~e~gev~l--p~~~~GSSiMP~KrNPv~~E~i~~---~a~~v 332 (458)
T PLN00134 258 EALAAHDAFVELSGALNTVAVSLMKIANDIRLLGSGPRCGLGELNL--PENEPGSSIMPGKVNPTQCEALTM---VCAQV 332 (458)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcceEEC--CCCCCCCCCCCCCcCCHHHHHHHH---HHHHH
Confidence 458999999999999999999999999999998 4788776 345799999999999999999987 45599
Q ss_pred Hhhhhhhc-cccccccccccchH----HHHHhHHH----HHHHHhhcccccccccc
Q 013159 396 LSFLSMKL-PISRWQVRSNLTLL----LIFFNFDL----WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 396 ~g~la~~L-~~s~~qRDl~~~~~----~~~~~~~~----~~~ll~~~~~~~~~~~~ 442 (448)
.|++...+ .....+..++.+++ .++..+.. ...+...+...++|++|
T Consensus 333 ~g~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~l~~l~vn~e 388 (458)
T PLN00134 333 MGNHVAITVGGSAGHFELNVFKPLIAYNLLHSIRLLGDASASFRKNCVRGIEANRE 388 (458)
T ss_pred HhHHHHHHHHHhcCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 99876555 22222233333566 44444444 22233467777777765
No 40
>PRK12425 fumarate hydratase; Provisional
Probab=100.00 E-value=9.4e-54 Score=450.68 Aligned_cols=318 Identities=17% Similarity=0.099 Sum_probs=241.7
Q ss_pred chhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccH-HhH--HHHHhhhCCcH-hHHHHHH----H
Q 013159 105 YGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDA-LEV--KNIERVTNHDV-KAVEYFL----K 176 (448)
Q Consensus 105 ~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~-~~l--~~~e~~t~hDv-~a~e~~L----~ 176 (448)
..+|+++..|-.||+.++. +.|+|+++.+++|. +.++++..... ..+ .-.....++|+ +.++..| .
T Consensus 40 ~~~i~a~~~ik~Aha~~l~---~~G~l~~~~~~~I~---~al~ei~~~~~~~~f~~~~~~~g~~ed~~mnvnevi~~~~~ 113 (464)
T PRK12425 40 LAVLHALALIKKAAARVND---RNGDLPADIARLIE---QAADEVLDGQHDDQFPLVVWQTGSGTQSNMNVNEVIAGRAN 113 (464)
T ss_pred HHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHH---HHHHHHHcCcccCCCCccCCCCCCcchHHHHHHHHHHHHHH
Confidence 5699999999999999999 89999976666653 33333211111 010 00112336788 8885554 5
Q ss_pred HHhccCcchhhccCc--------cccCCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcccceeeccccC
Q 013159 177 QKCQSQPEIAKVLEF--------FHFACTSEDINNLAHALMLKEAI-NKVMFPVMDKLIKALCEIAKDNANISMLSRTHG 247 (448)
Q Consensus 177 ~~~g~~~~l~~~~~~--------vH~G~TsnDi~dTa~~L~lr~al-~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~ 247 (448)
+++|. +.+++ ||+|+||||+++|+++|++|+++ .. +.+.|.+++++|.++|++|++++|+||||+
T Consensus 114 e~~G~-----~~g~~~~vhpn~~vh~g~S~ND~~~Ta~~L~~r~~l~~~-l~~~L~~l~~~L~~~A~~~~~tim~GrTHl 187 (464)
T PRK12425 114 ELAGN-----GRGGKSPVHPNDHVNRSQSSNDCFPTAMHIAAAQAVHEQ-LLPAIAELSGGLAEQSARHAKLVKTGRTHM 187 (464)
T ss_pred HHhCc-----ccccccccCchhcccCCCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeeccccc
Confidence 55553 24444 99999999999999999999999 55 999999999999999999999999999999
Q ss_pred CCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhh-cccccccccccccccCCCCChhhhHHHHHHHcCCCCCCCCc--
Q 013159 248 QPASPTTLGKEISVFAIRLGRERQEISQVE---IMG-KFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVT-- 321 (448)
Q Consensus 248 Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg-~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~-- 321 (448)
|+||||||||||++|++.|.|+++||.++. ..+ .++||+||..... +++ ++.+.+.+++.|||+.++..+
T Consensus 188 Q~A~PiT~G~~~~a~~~~l~rd~~RL~~~~~r~~~~plGggAvGT~~~~~---~~~-~~~~~~~La~~LG~~~~~~~n~~ 263 (464)
T PRK12425 188 MDATPITFGQELSAFVAQLDYAERAIRAALPAVCELAQGGTAVGTGLNAP---HGF-AEAIAAELAALSGLPFVTAPNKF 263 (464)
T ss_pred ccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhcCcccCC---ccH-HHHHHHHHHHHhCCCCcccccHH
Confidence 999999999999999999999999999985 222 4478999942211 111 356788899999999865433
Q ss_pred -cccchhHHHHHHHHHHHHHHHHHHHHHhhhhhh---hccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHh
Q 013159 322 -QIETHDYMAKLFYAFVRFNNILIDFDRDVWGYI---SLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLS 397 (448)
Q Consensus 322 -qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~---s~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g 397 (448)
++++||++++++++++.++++|+|||+||++|+ ++|+.++..+..++||||||||+||+.+|.++++ |+++.|
T Consensus 264 da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llsS~p~~g~~ei~lp~~~~GSSiMPqK~NP~~~E~i~~~---a~~v~G 340 (464)
T PRK12425 264 AALAGHEPLVSLSGALKTLAVALMKIANDLRLLGSGPRAGLAEVRLPANEPGSSIMPGKVNPTQCEALSML---ACQVMG 340 (464)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCceEEECCCCCCCCCCCCCCcCCHHHHHHHHH---HHHHHh
Confidence 568999999999999999999999999999998 4555544456679999999999999999999984 559999
Q ss_pred hhhhhcccccccccccc--chHH----HHHhHHH----HHHHHhhcccccccccc
Q 013159 398 FLSMKLPISRWQVRSNL--TLLL----IFFNFDL----WLCLLRQVPWYLKFKSD 442 (448)
Q Consensus 398 ~la~~L~~s~~qRDl~~--~~~~----~~~~~~~----~~~ll~~~~~~~~~~~~ 442 (448)
++...+... -+++++. +++. +|..++. ...+...+...++|++|
T Consensus 341 ~~~~v~~~~-~~~~~q~n~~~~~~~~~~l~s~~~l~~~~~~~~~~~i~~l~vn~e 394 (464)
T PRK12425 341 NDATIGFAA-SQGHLQLNVFKPVIIHNLLQSIRLLADGCRNFQQHCVAGLEPDAE 394 (464)
T ss_pred HHHHHHHHH-hcCCchhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 886555311 1244444 6666 5555555 22344467777777765
No 41
>PRK14515 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=8.3e-52 Score=436.73 Aligned_cols=320 Identities=17% Similarity=0.091 Sum_probs=246.7
Q ss_pred cchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHH-HHHHHccCCcccHHhHHHHHhhhCCc------H-hHHHHHH
Q 013159 104 EYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSY-LQGLIDGFNMDDALEVKNIERVTNHD------V-KAVEYFL 175 (448)
Q Consensus 104 e~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~-i~~~~~~~~~~d~~~l~~~e~~t~hD------v-~a~e~~L 175 (448)
+..++++...+-.||+.++. +.|+++++.+++|.+ +.++.+... .+ .+.-....++.+ | ..+|+.+
T Consensus 48 ~~~~i~~~~~v~~A~a~~l~---~~G~l~~~~~~~I~~al~ei~~~~~-~~--~f~~~~~~~g~~t~~nmnvnevie~~~ 121 (479)
T PRK14515 48 HEGLIKAFAIVKKAAALANT---DVGRLELNKGGAIAEAAQEILDGKW-HD--HFIVDPIQGGAGTSMNMNANEVIANRA 121 (479)
T ss_pred CHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHcCcc-cC--CCCCCcccCCCcccccchHHHHHHHHH
Confidence 35699999999999999999 899999866666642 222221110 01 110011122334 5 6699999
Q ss_pred HHHhccCcchhhccC--------ccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccccC
Q 013159 176 KQKCQSQPEIAKVLE--------FFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHG 247 (448)
Q Consensus 176 ~~~~g~~~~l~~~~~--------~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~ 247 (448)
.+++|. +.++ +||+||||||+++||++|++|+.+.. +.+.|..++++|.++|++|++++|+||||+
T Consensus 122 ~~~~G~-----~~g~~~~~hpnd~vn~grS~ND~v~Ta~~L~~~~~l~~-l~~~L~~L~~~L~~~A~~~~~~vm~GrTHl 195 (479)
T PRK14515 122 LELLGM-----EKGDYHYISPNSHVNMAQSTNDAFPTAIHIATLNALEG-LLQTMGYMHDVFELKAEQFDHVIKMGRTHL 195 (479)
T ss_pred HHHhCc-----ccCCccccCccccCCCCCCchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccchhcc
Confidence 999985 1344 67799999999999999999999995 999999999999999999999999999999
Q ss_pred CCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhccc-ccccccccccccCCCCChhhhHHHHHHHcCCCCCCCC---
Q 013159 248 QPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFA-GAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYV--- 320 (448)
Q Consensus 248 Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~g-GAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~--- 320 (448)
|||+||||||||++|++.|.|+++||.++. ..+++| ||+||..... +++ -.++...+++.+||..++..
T Consensus 196 Q~A~PiT~G~~~~~~a~~l~r~~~RL~~~~~~l~~~pLG~gAvGT~~~~~---~~~-~~~~l~~la~~~gl~~~~~~n~~ 271 (479)
T PRK14515 196 QDAVPIRLGQEFKAYSRVLERDMKRIQQSRQHLYEVNMGATAVGTGLNAD---PEY-IEAVVKHLAAISELPLVGAEDLV 271 (479)
T ss_pred ccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCCCC---hhH-HHHHHHHHHHHhCCCCCCCcchH
Confidence 999999999999999999999999999985 455555 8999942221 111 13456677888998765322
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhh---hccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHh
Q 013159 321 TQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYI---SLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLS 397 (448)
Q Consensus 321 ~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~---s~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g 397 (448)
+++++||++++++++++.++++|+|||+||++|+ .+|+.++..+.+++|||||||||||+.+|.+++ +|+++.|
T Consensus 272 da~~~rd~~~e~~~~l~~la~~L~kiA~Dl~llsS~p~~g~~Ei~lp~~~~GSSiMP~KrNP~~~E~i~~---~a~~v~G 348 (479)
T PRK14515 272 DATQNTDAYTEVSAALKVCMMNMSKIANDLRLMASGPRVGLAEIMLPARQPGSSIMPGKVNPVMPEVINQ---IAFQVIG 348 (479)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCeeEEeCCCCCCCcCCCCcccCchHHHHHHH---HHHHHHh
Confidence 3568899999999999999999999999999998 478877556668999999999999999999998 4559999
Q ss_pred hhhhhcc-ccccccccccchH----HHHHhHHH---HHHHHh-hcccccccccc
Q 013159 398 FLSMKLP-ISRWQVRSNLTLL----LIFFNFDL---WLCLLR-QVPWYLKFKSD 442 (448)
Q Consensus 398 ~la~~L~-~s~~qRDl~~~~~----~~~~~~~~---~~~ll~-~~~~~~~~~~~ 442 (448)
+....+. ...|+.+++...| .+|.+++. ....+. .+...++|++|
T Consensus 349 ~~~~~~~~~~~~~le~n~~~p~i~~~l~~si~~l~~al~~~~~~~l~gl~vn~e 402 (479)
T PRK14515 349 NDHTICLASEAGQLELNVMEPVLVFNLLQSISIMNNGFRAFTDNCLKGIEANED 402 (479)
T ss_pred HHHHHHHHHhcccHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 8754443 4567888887766 45665555 332333 36777888765
No 42
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=1e-42 Score=353.97 Aligned_cols=318 Identities=22% Similarity=0.237 Sum_probs=275.1
Q ss_pred cCCCCCccCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHccCCcccHHhHHHHHh
Q 013159 83 ALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIER 162 (448)
Q Consensus 83 ~~sp~dgry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~~~~~~~d~~~l~~~e~ 162 (448)
..+|..+||.+ ..+|.++||+.+.++.|-++..-++.|.. ..+++.||+ ++++++... .+++..|+..+.+.+.
T Consensus 6 ~~~pls~ry~~-~~~l~~~~s~~~~~~twr~lw~~lA~ae~-~lgL~~itk---~ai~e~~s~-~~~e~~d~~~l~~ee~ 79 (481)
T KOG2700|consen 6 YKSPLSGRYAS-ISELNPIFSDRNKFSTWRRLWLWLAEAEK-ELGLTTITK---EAIEEMKSS-RDIENIDFTALSPEEG 79 (481)
T ss_pred CCCcccceecc-ccccchhhhhhhhhhhhhHHHHhhhhhhh-cCCcccchH---HHHHHHHhh-ccccccchhhcChhhh
Confidence 56899999996 47999999999999988888766666655 235556775 555555543 3566668999999999
Q ss_pred hhCCcHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceee
Q 013159 163 VTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISML 242 (448)
Q Consensus 163 ~t~hDv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~ 242 (448)
+.+|||++++..+.+.|.. +.+++|.|+|++++.|.+....+|++.+ .+.+.|..+|+.|..++.+|++++|.
T Consensus 80 r~~hdVmahvh~~~~~cp~------aagiihlgatsc~vtdnadli~~rd~~k-~i~~~l~~vIdrls~~~~~~k~~~~~ 152 (481)
T KOG2700|consen 80 RYRHDVMAHVHSFGELCPI------AAGIIHLGATSCFVTDNADLIELRDASK-LILPYLAGVIDRLSQFADKYKEKPTL 152 (481)
T ss_pred hhcccHHHHHHHHHhhcch------hcceEEeeeeeeeecCCccceechhHHH-HHHHHHHHHHHHHHHHHHHhccceec
Confidence 9999999999999999865 7889999999999999999999999999 59999999999999999999999999
Q ss_pred ccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhH---hhhcccccccccccccccCCCCC--hhhhHHHHHHHcCCCCC
Q 013159 243 SRTHGQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVN--WPQITEDFVKSLGLSFN 317 (448)
Q Consensus 243 gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~---~lg~~gGAvGT~~a~~~~~p~~d--~~~v~~~la~~LGL~~~ 317 (448)
||||.|+|+|+|||++.+-|..+|.+++++|..+. -...++||+||.+++...+.+.. .++.++.+++.+||...
T Consensus 153 g~Th~q~A~l~tfgkr~~~~~qel~~~l~~f~~~~~~~~~~~~kga~gtqasf~~l~~~~~~kv~~ld~Lv~k~~gf~~~ 232 (481)
T KOG2700|consen 153 GRTHLQPAQLTTFGKRMCLWIQELLRDLERFHRARTDVRFRGLKGATGTQASFLSLFLGDMDKVEKLDSLVTKELGFVPM 232 (481)
T ss_pred ccccCccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHhhcccHHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999999999999999986 34556899999988876665432 22344466799999986
Q ss_pred CCCc-cccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHH
Q 013159 318 PYVT-QIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDL 396 (448)
Q Consensus 318 ~~~~-qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~ 396 (448)
...| |+.+||..++..+.+++++++..|++.|++++..+++++++++++++|||+||+||||+.+|++++ +++.+.
T Consensus 233 ~~~TGQt~sr~~~~~~~~~la~lgat~~k~~Tdirll~~~~ev~epFea~q~gsSaMp~krNpm~~E~its---lar~l~ 309 (481)
T KOG2700|consen 233 YIVTGQTYSRKTDAEEVAPLASLGATAHKYATDIRLLAKFAEVEEPFEAHQIGSSAMPYKRNPMRCERITS---LARHLR 309 (481)
T ss_pred ccccCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCCCCCCCchhHHHhH---HHHHHH
Confidence 5555 899999999999999999999999999999999999999999999999999999999999999664 888999
Q ss_pred hhhhhhcc---ccccccccccch
Q 013159 397 SFLSMKLP---ISRWQVRSNLTL 416 (448)
Q Consensus 397 g~la~~L~---~s~~qRDl~~~~ 416 (448)
.+.+..++ +.+++|++.+|.
T Consensus 310 ~~v~~al~~~~~qw~Ertl~dSa 332 (481)
T KOG2700|consen 310 PYVTQALNTASVQWHERTLDDSA 332 (481)
T ss_pred HHHHHHhhhHHHHHhhccccccc
Confidence 99887775 567799999887
No 43
>COG0114 FumC Fumarase [Energy production and conversion]
Probab=100.00 E-value=3.4e-42 Score=346.59 Aligned_cols=319 Identities=22% Similarity=0.200 Sum_probs=245.9
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHH-HHc-cCCcccHHhHHHHHhhh--CCcH-hHHHHHHHHHhc
Q 013159 106 GLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQG-LID-GFNMDDALEVKNIERVT--NHDV-KAVEYFLKQKCQ 180 (448)
Q Consensus 106 ~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~-~~~-~~~~~d~~~l~~~e~~t--~hDv-~a~e~~L~~~~g 180 (448)
.+++++-.+-.+-+++=. ++|.+|+.-+++|...+. +++ .++..=+-.+.+--..| |-.+ .-+-..-.+.+|
T Consensus 42 ~~I~Al~~lKkaaA~~N~---~LG~L~~~~a~aI~~Aadev~~Gk~d~~FPl~VwQTGSGTqsNMN~NEVIanrA~e~~g 118 (462)
T COG0114 42 EIIRALGLLKKAAAQVNA---DLGLLDPEKADAIIAAADEVLAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLG 118 (462)
T ss_pred HHHHHHHHHHHHHHHHHH---HhCCCCHHHHHHHHHHHHHHHcCcccCCCCeEEEecCCCccccccHHHHHHHHHHHHhC
Confidence 467777777777777777 899999877777653322 221 11100000011111111 1122 111122234444
Q ss_pred c-Cc--chhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccccCCCCcccchhh
Q 013159 181 S-QP--EIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTTLGK 257 (448)
Q Consensus 181 ~-~~--~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~Q~A~PtTfG~ 257 (448)
. .. ......++|++|+||||+++||+++....++...|+|.|+.|+++|.++|++|.+++.+||||+|+|.|+|||+
T Consensus 119 g~~g~~~~VHPNDhVN~sQSSNDtfPTAmhIAa~~~v~~~LiPaL~~L~~~L~~Ka~~~~~iVKiGRTHLqDAtPlTlGQ 198 (462)
T COG0114 119 GELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLAVVNRLIPALKHLIKTLAAKAEEFADVVKIGRTHLQDATPLTLGQ 198 (462)
T ss_pred cccCCCCCCCCCCcCCcccccCcchhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhcCcccccccCcchhhh
Confidence 1 00 01234789999999999999999999999987789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhH----hhhcccccccc-cccccccCCCCChhhhHHHHHHHcCCCCCCCCc---cccchhHH
Q 013159 258 EISVFAIRLGRERQEISQVE----IMGKFAGAVGN-YNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVT---QIETHDYM 329 (448)
Q Consensus 258 ~la~~~~~L~r~~~rL~~~~----~lg~~gGAvGT-~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~---qi~~rD~~ 329 (448)
+|++|+..|.+.+++++... .+...|+|||| +|+| |++. +.+.+.+++..|+++.+..+ +...+|.+
T Consensus 199 E~sGy~~ql~~~~~~i~~~l~~l~eLAiGGTAVGTGlNa~----p~f~-ekva~~i~~~TG~~F~~a~NkF~al~~hd~l 273 (462)
T COG0114 199 EFSGYAAQLEHALERIEASLPHLYELAIGGTAVGTGLNAH----PEFG-EKVAEELAELTGLPFVTAPNKFEALAAHDAL 273 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccCcCCC----ccHH-HHHHHHHHHHhCCCcccCCcHHHHHhcchHH
Confidence 99999999999999999873 45555899999 9988 4443 56788889999998854432 67889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhh---ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhh-hhhhccc
Q 013159 330 AKLFYAFVRFNNILIDFDRDVWGYIS---LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSF-LSMKLPI 405 (448)
Q Consensus 330 ael~~~la~i~~~L~kia~Di~l~~s---~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~-la~~L~~ 405 (448)
+++.++|..++..|.|||+||++|.| .|+.++..|+.++||||||+|+||+.+|.+-+. |.+|+|. .+.....
T Consensus 274 v~~~Gal~~lA~~L~KIAnDiR~l~SGPr~GLgEi~lPenePGSSIMPGKVNPtq~EA~tmv---~~QV~Gnd~ai~~ag 350 (462)
T COG0114 274 VEASGALRTLAVSLMKIANDIRWLGSGPRCGLGEIELPENEPGSSIMPGKVNPTQCEALTMV---AAQVIGNDAAIAFAG 350 (462)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCCCccCCCCCCCchhHHHHHHH---HHHHHcchHHHHHhh
Confidence 99999999999999999999999987 666666678999999999999999999998874 4499995 4566677
Q ss_pred cccccccccchHHHHHhHHHHHHHHhhccc
Q 013159 406 SRWQVRSNLTLLLIFFNFDLWLCLLRQVPW 435 (448)
Q Consensus 406 s~~qRDl~~~~~~~~~~~~~~~~ll~~~~~ 435 (448)
+.++.+|+.++|.+.+++.++..||.+.+.
T Consensus 351 s~GnFELNv~~Pvi~~N~LqS~~LLada~~ 380 (462)
T COG0114 351 SQGNFELNVFKPVIAYNFLQSVRLLADAMR 380 (462)
T ss_pred ccCceeeccccHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999998888777654
No 44
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-40 Score=332.19 Aligned_cols=318 Identities=20% Similarity=0.187 Sum_probs=252.4
Q ss_pred chhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHH-c-----cCCcccHHhHHHHHhhhCC--cH-hHHHHHH
Q 013159 105 YGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLI-D-----GFNMDDALEVKNIERVTNH--DV-KAVEYFL 175 (448)
Q Consensus 105 ~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~i~~~~-~-----~~~~~d~~~l~~~e~~t~h--Dv-~a~e~~L 175 (448)
+.+++.++.|-.|-+.|-. ++|.+|+.-+++|.+.+..+ + +|-. |. .+.-+.|-. .+ .-+-..-
T Consensus 44 p~~i~a~~~VKKAaAlaN~---elg~l~~~~~~aIv~ACDeil~Gk~~dqFvv-D~---~QGGAGTS~NMN~NEVIAN~A 116 (471)
T COG1027 44 PEFIRAMAMVKKAAALANK---ELGALPKEIADAIVKACDEILDGKCHDQFVV-DV---YQGGAGTSTNMNANEVIANRA 116 (471)
T ss_pred HHHHHHHHHHHHHHHHhhh---hhCCCCHHHHHHHHHHHHHHHcCccccccce-ec---cccCCCccccccHHHHHHHHH
Confidence 5689999999998888877 89999987777765443322 1 1211 11 111222211 11 1111222
Q ss_pred HHHhccC-cc--hhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccccCCCCcc
Q 013159 176 KQKCQSQ-PE--IAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASP 252 (448)
Q Consensus 176 ~~~~g~~-~~--l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~Q~A~P 252 (448)
-+.+|.. ++ .-...++|++++|+||+.+|++++.+...+.+ |.+.+..|++++.+|+++|++++++||||+|+|.|
T Consensus 117 lE~lG~~KGeY~~~hPndhVNmsQSTND~yPTa~ria~~~~l~~-L~~al~~L~~af~~Ka~EF~~ilKmGRTqLQDAvP 195 (471)
T COG1027 117 LELLGHEKGEYQYLHPNDHVNMSQSTNDAYPTAFRIAVYKSLRK-LIDALEDLIEAFERKAKEFADILKMGRTQLQDAVP 195 (471)
T ss_pred HHHhcCCCCceeeeCCccccchhhcccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhhcChhhhccccc
Confidence 3444431 11 11236779999999999999999999999996 99999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhH----hhhcccccccc-cccccccCCCCChhhhHHHHHHHcCCCCCCCC---cccc
Q 013159 253 TTLGKEISVFAIRLGRERQEISQVE----IMGKFAGAVGN-YNAHLSAYPDVNWPQITEDFVKSLGLSFNPYV---TQIE 324 (448)
Q Consensus 253 tTfG~~la~~~~~L~r~~~rL~~~~----~lg~~gGAvGT-~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~---~qi~ 324 (448)
+|+|++|.+|+..|.|++.||.++. .+.-.|+|+|| .|++. .|. +.+.+.+++..|++..+.. .+++
T Consensus 196 mtlGqEF~Afa~~l~ed~~ri~~~~~~l~evNlGgTAiGTGiNa~~-~Y~----~~vv~~l~evtg~~~~~A~~Lieatq 270 (471)
T COG1027 196 MTLGQEFGAFAVALKEDIKRIYRAAELLLEVNLGGTAIGTGINAPK-GYI----ELVVKKLAEVTGLPLVPAENLIEATQ 270 (471)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCceeeccCcCCCh-hHH----HHHHHHHHHHhCCCCccchhHHHHHh
Confidence 9999999999999999999999885 22223688999 88874 243 4577899999999886543 2567
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhhhh---ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhh-hh
Q 013159 325 THDYMAKLFYAFVRFNNILIDFDRDVWGYIS---LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSF-LS 400 (448)
Q Consensus 325 ~rD~~ael~~~la~i~~~L~kia~Di~l~~s---~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~-la 400 (448)
+.|.++++.+++.+++..|+|+++|+++++| .|+-++.+|+.|.||||||.|+||+.+|.+.+ .|..|+|+ .+
T Consensus 271 ~~~afv~vsg~lk~~Av~LsKI~NDlRLLsSGPr~Gl~EI~LP~~Q~GSSIMPgKVNPVipEvvnQ---vcf~ViGnD~t 347 (471)
T COG1027 271 DTGAFVMVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLPAVQAGSSIMPGKVNPVIPEVVNQ---VCFKVIGNDTT 347 (471)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhhhhhhhccCCccCcccccCCCCCCCCCCCCCCcCchhHHHHHH---HHHHHhcchHH
Confidence 8999999999999999999999999999998 77778888999999999999999999999887 56699995 56
Q ss_pred hhccccccccccccchHHHHHhHHHHHHHHhhcccccc
Q 013159 401 MKLPISRWQVRSNLTLLLIFFNFDLWLCLLRQVPWYLK 438 (448)
Q Consensus 401 ~~L~~s~~qRDl~~~~~~~~~~~~~~~~ll~~~~~~~~ 438 (448)
..++...+|..|+.+.|.+.+++..+..+|+..+..++
T Consensus 348 it~AaeaGQLqLNvmePvI~~~l~~Si~iL~na~~~l~ 385 (471)
T COG1027 348 ITMAAEAGQLQLNVMEPVIAYALFESISILTNACRNLR 385 (471)
T ss_pred HHHHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777889999999999999999999888887766543
No 45
>KOG1317 consensus Fumarase [Energy production and conversion]
Probab=100.00 E-value=1.4e-35 Score=291.68 Aligned_cols=240 Identities=23% Similarity=0.227 Sum_probs=212.7
Q ss_pred hccCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccccCCCCcccchhhHHHHHHHHH
Q 013159 187 KVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTTLGKEISVFAIRL 266 (448)
Q Consensus 187 ~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH~Q~A~PtTfG~~la~~~~~L 266 (448)
...++++..+||||..+|++++..-..+...|+|.|..|.++|..++++|+|++.+||||.|+|.|.|+|++|++|++.+
T Consensus 153 HPNdHvN~SQSSNDTFPtamHIa~~~ei~~~L~P~l~~L~~aL~aKs~EfkdIiKIGRTHtqDAvPLTLGQEFsgY~qQ~ 232 (487)
T KOG1317|consen 153 HPNDHVNKSQSSNDTFPTAMHIAAATEINSRLIPALTNLRDALEAKSKEFKDIIKIGRTHTQDAVPLTLGQEFSGYVQQV 232 (487)
T ss_pred CCccccccccccCCccchHHHHHHHHHHHHhhhHHHHHHHHHHHhhhHHHHHHHHhcccccccccccchhhhhhhHHHHH
Confidence 34788999999999999999999988887789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh----Hhhhcccccccc-cccccccCCCCChhhhHHHHHHHcCCCCCCCCc---cccchhHHHHHHHHHHH
Q 013159 267 GRERQEISQV----EIMGKFAGAVGN-YNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVT---QIETHDYMAKLFYAFVR 338 (448)
Q Consensus 267 ~r~~~rL~~~----~~lg~~gGAvGT-~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~---qi~~rD~~ael~~~la~ 338 (448)
...++|++.. +.+.+.|+|||| +|.- ++++ +++.++++++.||++...++ +...||.++|+.+++..
T Consensus 233 ~ngl~Rv~~~lpr~y~LA~GGTAVGTGLNTr----~GFa-eK~a~~va~ltgLpFvtApNkFEALAahDA~VE~~GalNt 307 (487)
T KOG1317|consen 233 TNGLQRVAATLPRLYQLAQGGTAVGTGLNTR----KGFA-EKIAARVAELTGLPFVTAPNKFEALAAHDAMVEVSGALNT 307 (487)
T ss_pred HHHHHHHHhhhhHHHHHhcCCcccccccccc----ccHH-HHHHHHHHHHhCCCceecccHHHHHHhhhhHHHhcccHHH
Confidence 9999999876 356777899999 6643 4555 67889999999999854432 57789999999999999
Q ss_pred HHHHHHHHHHhhhhhhh---ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHh-hhhhhcccccccccccc
Q 013159 339 FNNILIDFDRDVWGYIS---LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLS-FLSMKLPISRWQVRSNL 414 (448)
Q Consensus 339 i~~~L~kia~Di~l~~s---~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g-~la~~L~~s~~qRDl~~ 414 (448)
++.+|.||++||+.+.| .|+.++.+|+.+.||||||.|+||..||.+-..|. +++| ++++...-|.++.+|+.
T Consensus 308 ~A~SlmKianDIRfLGSGPRcGlgEL~LPENEPGSSIMPGKVNPTQcEamTmvca---QVMGN~vAvtvgGsnGhFELNV 384 (487)
T KOG1317|consen 308 IAVSLMKIANDIRFLGSGPRCGLGELMLPENEPGSSIMPGKVNPTQCEAMTMVCA---QVMGNHVAVTVGGSNGHFELNV 384 (487)
T ss_pred HHHHHHHHhhhhhhccCCCCCCccccccCCCCCCcccCCCCCCcHHHHHHHHHHH---HHhcCceEEEecccCceeEEec
Confidence 99999999999999986 77777778999999999999999999999887554 9999 56777777899999999
Q ss_pred chHHHHHhHHHHHHHHhhcc
Q 013159 415 TLLLIFFNFDLWLCLLRQVP 434 (448)
Q Consensus 415 ~~~~~~~~~~~~~~ll~~~~ 434 (448)
++|.+..+++.+..|+.+..
T Consensus 385 FKP~i~~nvL~SirLl~D~~ 404 (487)
T KOG1317|consen 385 FKPLIASNVLHSIRLLADAS 404 (487)
T ss_pred chHHHHHHHHHHHHHhhhhh
Confidence 99999999999777776543
No 46
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions. Lyase class I_like superfamily of enzymes that catalyze beta-elimination reactions and are active as homotetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. This superfamily contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase. The lyase class I family comprises proteins similar to class II fumarase, aspartase, adenylosuccinate lyase, argininosuccinate lyase, and 3-carboxy-cis, cis-muconate lactonizing enzyme which, for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. Histidine or phenylalanine ammonia-lyase catalyze a beta-elimination of ammonia from histidine and phenylalanine, respective
Probab=100.00 E-value=3.5e-34 Score=274.05 Aligned_cols=200 Identities=28% Similarity=0.316 Sum_probs=165.9
Q ss_pred HHHHHHHHhccCcchhhccCc-----cccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeeccc
Q 013159 171 VEYFLKQKCQSQPEIAKVLEF-----FHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRT 245 (448)
Q Consensus 171 ~e~~L~~~~g~~~~l~~~~~~-----vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRT 245 (448)
+|++|.+.++. ..++. +|+|+||||+++|+.++++|+++.. +.+.+..+.+++..+|++|++++|+|||
T Consensus 16 i~~~L~~~~~~-----~~~~~~~~~~~h~g~s~~d~~~t~~~~~~~~~l~~-l~~~l~~~~~~l~~~a~~~~~~~~~~~t 89 (231)
T cd01594 16 VEEVLAGRAGE-----LAGGLHGSALVHKGRSSNDIGTTALRLALRDALDD-LLPLLKALIDALALKAEAHKGTVMPGRT 89 (231)
T ss_pred HHHHHHHHHHH-----HhccccCCCCCCCCCCCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCEeeccc
Confidence 55566666554 23444 4999999999999999999999995 9999999999999999999999999999
Q ss_pred cCCCCcccchhhHHHHHHHHHHHHHHHHHHhHhhhcccccccccccccccCCCCChhhhHHHHHHHcCCCCCCCCccccc
Q 013159 246 HGQPASPTTLGKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQIET 325 (448)
Q Consensus 246 H~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~~lg~~gGAvGT~~a~~~~~p~~d~~~v~~~la~~LGL~~~~~~~qi~~ 325 (448)
|+|+|+|+|||+++++|.+.|.|+++||.++
T Consensus 90 h~q~A~p~t~g~~~~~~~~~l~~~~~rL~~~------------------------------------------------- 120 (231)
T cd01594 90 HLQDAQPVTLGYELRAWAQVLGRDLERLEEA------------------------------------------------- 120 (231)
T ss_pred ccccCccccHHHHHHHHHHHHHHHHHHHHHH-------------------------------------------------
Confidence 9999999999999999999999999999876
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhhhc
Q 013159 326 HDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSMKL 403 (448)
Q Consensus 326 rD~~ael~~~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~~L 403 (448)
+++++++.++.++..|+||++|++.|.+ ++++.++...+++|||+||||+||+.+|.++++.. .+.+.....+
T Consensus 121 --~~~~~~~~l~~~~~~l~r~a~d~~~~~~~~~~~~~~~~~~~~~gSS~mp~k~Np~~~e~~~~~~~---~~~~~~~~~~ 195 (231)
T cd01594 121 --AVAEALDALALAAAHLSKIAEDLRLLLSGEFGELGEPFLPGQPGSSIMPQKVNPVAAELVRGLAG---LVIGNLVAVL 195 (231)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeeeCccCCCCCCCcCCCCCCCCHHHHHHHHHHH---HHHhhHHHHH
Confidence 8899999999999999999999998875 55555533336899999999999999999988555 6666554444
Q ss_pred cc-----cccccccccchHHHHHhHHHHHHHH
Q 013159 404 PI-----SRWQVRSNLTLLLIFFNFDLWLCLL 430 (448)
Q Consensus 404 ~~-----s~~qRDl~~~~~~~~~~~~~~~~ll 430 (448)
+. .+++.|.+.....+++.+......+
T Consensus 196 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l 227 (231)
T cd01594 196 TALKGGPERDNEDSPSMREILADSLLLLIDAL 227 (231)
T ss_pred HHHhcccccccccCHHHHHHHHHHHHHHHHHH
Confidence 32 2567777777777777777644443
No 47
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=99.77 E-value=4.7e-20 Score=188.83 Aligned_cols=322 Identities=22% Similarity=0.205 Sum_probs=258.2
Q ss_pred hhhhccccccccccccccccccCCCCCccCCCCccchHHhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHH
Q 013159 62 YKKVVNMSKVDSREFELSSLTALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSY 141 (448)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~sp~dgry~~~~~el~~ifSe~~~i~~~l~VE~a~a~ala~~~~~giIp~~~a~a~~~ 141 (448)
.+....+......+++.+++++++|.++||+.++.....-|++.......+.++.||.......+++-.+|......+-+
T Consensus 52 itk~ai~e~~s~~~~e~~d~~~l~~ee~r~~hdVmahvh~~~~~cp~aagiihlgatsc~vtdnadli~~rd~~k~i~~~ 131 (481)
T KOG2700|consen 52 ITKEAIEEMKSSRDIENIDFTALSPEEGRYRHDVMAHVHSFGELCPIAAGIIHLGATSCFVTDNADLIELRDASKLILPY 131 (481)
T ss_pred chHHHHHHHHhhccccccchhhcChhhhhhcccHHHHHHHHHhhcchhcceEEeeeeeeeecCCccceechhHHHHHHHH
Confidence 33344444455567888999999999999999999999999999999999999999999988888888899888888878
Q ss_pred HHHHHccCCc-ccHHhHHHHHhhhCCcHhHHHHHHHHHhccCcchhhccCccccCCChhhHHHHHHHHHHHHHHHHHHHH
Q 013159 142 LQGLIDGFNM-DDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFP 220 (448)
Q Consensus 142 i~~~~~~~~~-~d~~~l~~~e~~t~hDv~a~e~~L~~~~g~~~~l~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~ 220 (448)
+..+++.+.. .+.-+.+..+..|+++..+++++.++.|--.++|..+-+++|..|++.|+....-+.....++..++.+
T Consensus 132 l~~vIdrls~~~~~~k~~~~~g~Th~q~A~l~tfgkr~~~~~qel~~~l~~f~~~~~~~~~~~~kga~gtqasf~~l~~~ 211 (481)
T KOG2700|consen 132 LAGVIDRLSQFADKYKEKPTLGRTHLQPAQLTTFGKRMCLWIQELLRDLERFHRARTDVRFRGLKGATGTQASFLSLFLG 211 (481)
T ss_pred HHHHHHHHHHHHHHhccceecccccCccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHhhcc
Confidence 8877776652 234445667788999999999999999987788888899999999999999999999999999887888
Q ss_pred HHHHHHHHHHHHHHHcccceeeccccCCCCcccchhhHHHHHHHHHHHHHHHHHHhHhhhcccccccccccccccCCCCC
Q 013159 221 VMDKLIKALCEIAKDNANISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVN 300 (448)
Q Consensus 221 ~L~~l~~aL~~lA~~~~dt~m~gRTH~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~~~lg~~gGAvGT~~a~~~~~p~~d 300 (448)
..+++++...-.+++..=.+|..+| ||++.|.+.|++++..+.......+-+-+++.++++++++|.|+++-.++..++
T Consensus 212 ~~~kv~~ld~Lv~k~~gf~~~~~~T-GQt~sr~~~~~~~~~la~lgat~~k~~Tdirll~~~~ev~epFea~q~gsSaMp 290 (481)
T KOG2700|consen 212 DMDKVEKLDSLVTKELGFVPMYIVT-GQTYSRKTDAEEVAPLASLGATAHKYATDIRLLAKFAEVEEPFEAHQIGSSAMP 290 (481)
T ss_pred cHHHHHHHHHHHHHHhCCCcccccc-CCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCC
Confidence 8888877776667999999999999 999999999999999999999888888888999999999999998877676666
Q ss_pred hh--hhHHHHHHHcCCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccceeeecCCCCcccCCCCCCcC
Q 013159 301 WP--QITEDFVKSLGLSFNPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHKVN 378 (448)
Q Consensus 301 ~~--~v~~~la~~LGL~~~~~~~qi~~rD~~ael~~~la~i~~~L~kia~Di~l~~s~g~~~~~~~~~~~GSS~MPhKrN 378 (448)
|+ -++.+.+-.|+...+++. +..-.++ +++ .-++..|+|+||||+|
T Consensus 291 ~krNpm~~E~itslar~l~~~v--------------------~~al~~~----------~~q--w~Ertl~dSa~~rivl 338 (481)
T KOG2700|consen 291 YKRNPMRCERITSLARHLRPYV--------------------TQALNTA----------SVQ--WHERTLDDSANRRIVL 338 (481)
T ss_pred CCCCCchhHHHhHHHHHHHHHH--------------------HHHhhhH----------HHH--Hhhcccccccccceec
Confidence 65 222222222222222221 1111111 221 2357899999999999
Q ss_pred chHHHHhhhhhh-hhhHHHhhhhhhccccccccccccch
Q 013159 379 PIDFENSEGNLG-KANEDLSFLSMKLPISRWQVRSNLTL 416 (448)
Q Consensus 379 Pv~~E~~~g~~~-la~~v~g~la~~L~~s~~qRDl~~~~ 416 (448)
|+.|++..++++ ++|...|...-..++++.+||...+.
T Consensus 339 P~~Fl~ad~~L~~~~ni~~gl~v~p~~i~r~i~~e~~~~ 377 (481)
T KOG2700|consen 339 PDAFLTADGNLGTLLNILEGLVVYPKVIERNIRDELPFM 377 (481)
T ss_pred hHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHhhhhHH
Confidence 999999999999 88888887776667888888877654
No 48
>PRK08937 adenylosuccinate lyase; Provisional
Probab=99.70 E-value=3.4e-17 Score=156.57 Aligned_cols=106 Identities=21% Similarity=0.148 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhh--ccceeeecCCCCcccCCCCCCcCchHHHHhhhhhhhhhHHHhhhhhhcc--cccccc
Q 013159 335 AFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSMKLP--ISRWQV 410 (448)
Q Consensus 335 ~la~i~~~L~kia~Di~l~~s--~g~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~v~g~la~~L~--~s~~qR 410 (448)
+++.++++|+|||+|+++|++ +|++.++.+.+++||||||||+||+.+|++++ +++.+.|++...+. .+++||
T Consensus 22 ~l~~i~~~l~ria~Dl~~~~s~e~gei~~~~~~~~~gSSiMP~K~NP~~~E~i~~---~a~~~~g~~~~~~~~~~~~~er 98 (216)
T PRK08937 22 VLALIATSLEKFANEIRLLQRSEIREVEEPFAKGQKGSSAMPHKRNPIGSERITG---LARVLRSYLVTALENVPLWHER 98 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccceeecccccCCCCCccCCCccCcHHHHHHHH---HHHHHHHHHHHHHHHhHHHhcc
Confidence 899999999999999999975 88888866689999999999999999999998 45588887654432 477899
Q ss_pred ccccch---HHHHHhHHH---HHHHHhhccccccccccc
Q 013159 411 RSNLTL---LLIFFNFDL---WLCLLRQVPWYLKFKSDL 443 (448)
Q Consensus 411 Dl~~~~---~~~~~~~~~---~~~ll~~~~~~~~~~~~~ 443 (448)
|++.++ ..+++++.. .+..+..+...++|++|-
T Consensus 99 d~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~r 137 (216)
T PRK08937 99 DLSHSSAERIALPDAFLALDYILNRFVNILENLVVFPEN 137 (216)
T ss_pred CCchhHHHhhHHHHHHHHHHHHHHHHHHHHccCEECHHH
Confidence 999886 456666666 666777888888888763
No 49
>PF08328 ASL_C: Adenylosuccinate lyase C-terminal; InterPro: IPR013539 This domain is found at the C terminus of adenylosuccinate lyase(ASL; PurB in Escherichia coli). It has been identified in bacteria, eukaryotes and archaea and is found together with the lyase domain IPR000362 from INTERPRO. ASL catalyses the cleavage of succinylaminoimidazole carboxamide ribotide to aminoimidazole carboxamide ribotide and fumarate and the cleavage of adenylosuccinate to adenylate and fumarate []. ; GO: 0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, 0006188 IMP biosynthetic process; PDB: 2HVG_A 2QGA_C 2PTS_A 2PTR_A 2PTQ_B 3BHG_A 3GZH_A.
Probab=38.98 E-value=24 Score=31.19 Aligned_cols=12 Identities=33% Similarity=0.498 Sum_probs=9.0
Q ss_pred cccccccccchH
Q 013159 406 SRWQVRSNLTLL 417 (448)
Q Consensus 406 s~~qRDl~~~~~ 417 (448)
|+|||||.+|+.
T Consensus 1 SR~QRDLtDSTv 12 (115)
T PF08328_consen 1 SRWQRDLTDSTV 12 (115)
T ss_dssp -STTB-THHHHH
T ss_pred CcccccchHHHH
Confidence 689999999984
No 50
>KOG4797 consensus Transcriptional regulator [Transcription]
Probab=27.00 E-value=1.8e+02 Score=25.62 Aligned_cols=36 Identities=14% Similarity=0.280 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 013159 200 DINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDN 236 (448)
Q Consensus 200 Di~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~ 236 (448)
|.+-|-++..+|+.++ +|...+.+|.+....+-.++
T Consensus 55 DLVKtHLmfAVREEVe-~Lk~qI~eL~er~~~Le~EN 90 (123)
T KOG4797|consen 55 DLVKTHLMFAVREEVE-VLKEQIRELEERNSALEREN 90 (123)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 6788899999999999 69999999998888777766
No 51
>PF14735 HAUS4: HAUS augmin-like complex subunit 4
Probab=20.06 E-value=5.6e+02 Score=25.36 Aligned_cols=83 Identities=20% Similarity=0.218 Sum_probs=64.1
Q ss_pred HhHHHHHHHHHhccCcchhhccCccc-cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccceeecccc
Q 013159 168 VKAVEYFLKQKCQSQPEIAKVLEFFH-FACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTH 246 (448)
Q Consensus 168 v~a~e~~L~~~~g~~~~l~~~~~~vH-~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~aL~~lA~~~~dt~m~gRTH 246 (448)
..-+|..|+++|-. ...|.| -.-++++.+..|....|-+.+.. -...+.+..+.+.+..
T Consensus 42 ~~eiE~~Lk~KC~~------Lls~~~p~~~~~s~~l~~ak~~~L~~~l~~-ek~~~~~~k~~~~e~~------------- 101 (238)
T PF14735_consen 42 PREIEERLKKKCFS------LLSYHQPDSESSSEGLKAAKSWQLPELLRE-EKQRLEKEKAQLRELL------------- 101 (238)
T ss_pred HHHHHHHHHHHHHH------HHHHhCCCCccccchhhHhHHHhHHHHHHH-HHHHHHHHHHHHHHHH-------------
Confidence 36788999999965 555665 55666777788888888888875 7777777777766654
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHHHHHHh
Q 013159 247 GQPASPTTLGKEISVFAIRLGRERQEISQV 276 (448)
Q Consensus 247 ~Q~A~PtTfG~~la~~~~~L~r~~~rL~~~ 276 (448)
......++.|...|.+.++.|..+
T Consensus 102 ------~~l~~q~~~y~~vL~~cl~~L~~l 125 (238)
T PF14735_consen 102 ------VLLERQFATYYQVLLQCLQLLQKL 125 (238)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678999999999999999886
Done!