Query 013160
Match_columns 448
No_of_seqs 148 out of 222
Neff 5.2
Searched_HMMs 46136
Date Fri Mar 29 01:00:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013160.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013160hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3566 Glycosylphosphatidylin 100.0 7E-67 1.5E-71 546.6 24.4 309 8-399 7-317 (617)
2 PF04114 Gaa1: Gaa1-like, GPI 100.0 2.8E-50 6.1E-55 427.4 17.7 194 145-396 2-195 (504)
3 PRK10199 alkaline phosphatase 98.8 6.8E-08 1.5E-12 99.4 14.9 118 93-225 55-189 (346)
4 PF04389 Peptidase_M28: Peptid 98.2 3.8E-06 8.2E-11 76.9 7.2 64 162-225 1-74 (179)
5 KOG2194 Aminopeptidases of the 97.7 0.00017 3.7E-09 81.2 10.4 162 46-223 38-209 (834)
6 PRK06133 glutamate carboxypept 97.3 0.0045 9.7E-08 64.6 13.8 125 73-226 38-185 (410)
7 PRK08596 acetylornithine deace 97.3 0.004 8.6E-08 65.1 13.3 126 72-224 13-165 (421)
8 TIGR01892 AcOrn-deacetyl acety 97.2 0.0031 6.7E-08 63.7 11.4 119 79-226 4-145 (364)
9 TIGR01883 PepT-like peptidase 97.2 0.0038 8.3E-08 63.3 12.0 122 76-224 4-146 (361)
10 TIGR01879 hydantase amidase, h 97.1 0.0035 7.6E-08 65.1 11.3 100 94-225 32-139 (401)
11 PRK09133 hypothetical protein; 97.0 0.01 2.2E-07 62.9 14.0 129 71-226 36-191 (472)
12 PRK08588 succinyl-diaminopimel 97.0 0.0099 2.1E-07 60.8 12.9 120 74-225 4-148 (377)
13 PRK05111 acetylornithine deace 96.9 0.013 2.9E-07 59.9 13.3 122 74-225 7-157 (383)
14 PRK12890 allantoate amidohydro 96.8 0.01 2.2E-07 61.8 11.2 99 94-224 39-145 (414)
15 TIGR01882 peptidase-T peptidas 96.8 0.048 1E-06 57.0 16.2 99 94-223 34-187 (410)
16 PRK08652 acetylornithine deace 96.7 0.018 3.8E-07 57.9 11.8 115 74-225 4-133 (347)
17 PRK07906 hypothetical protein; 96.7 0.016 3.5E-07 60.5 11.8 122 76-225 3-154 (426)
18 PRK07522 acetylornithine deace 96.7 0.028 6E-07 57.5 13.2 123 74-226 6-151 (385)
19 PRK09290 allantoate amidohydro 96.6 0.019 4.1E-07 59.9 11.3 100 94-225 38-145 (413)
20 TIGR01910 DapE-ArgE acetylorni 96.6 0.022 4.8E-07 58.2 11.7 109 93-226 21-154 (375)
21 PRK12893 allantoate amidohydro 96.6 0.027 5.9E-07 58.4 12.3 101 94-226 41-149 (412)
22 PRK07473 carboxypeptidase; Pro 96.5 0.037 8E-07 57.2 13.0 126 74-226 13-161 (376)
23 PRK12892 allantoate amidohydro 96.4 0.018 3.8E-07 59.7 10.1 99 94-225 40-146 (412)
24 PRK12891 allantoate amidohydro 96.4 0.025 5.5E-07 59.1 11.0 96 94-221 41-144 (414)
25 PRK06446 hypothetical protein; 96.4 0.046 1E-06 57.5 13.0 122 74-226 4-151 (436)
26 PRK07907 hypothetical protein; 96.4 0.057 1.2E-06 57.0 13.7 121 73-225 19-169 (449)
27 PRK13009 succinyl-diaminopimel 96.3 0.055 1.2E-06 55.1 12.9 119 74-225 4-148 (375)
28 PRK08262 hypothetical protein; 96.3 0.058 1.3E-06 57.5 13.6 138 51-225 30-202 (486)
29 TIGR03176 AllC allantoate amid 96.3 0.027 5.9E-07 59.0 10.9 97 94-222 34-138 (406)
30 PF05450 Nicastrin: Nicastrin; 96.3 0.063 1.4E-06 52.9 12.6 123 164-305 3-137 (234)
31 TIGR01893 aa-his-dipept aminoa 96.3 0.037 7.9E-07 59.1 11.7 117 74-225 6-153 (477)
32 COG2234 Iap Predicted aminopep 96.3 0.022 4.8E-07 59.5 9.7 83 144-228 182-277 (435)
33 PRK13013 succinyl-diaminopimel 96.2 0.11 2.4E-06 54.0 14.2 131 72-223 14-170 (427)
34 PRK13983 diaminopimelate amino 96.2 0.096 2.1E-06 53.6 13.6 130 73-225 6-166 (400)
35 PRK13381 peptidase T; Provisio 96.1 0.053 1.1E-06 56.3 11.7 100 94-224 32-184 (404)
36 PRK13590 putative bifunctional 96.1 0.033 7.1E-07 61.5 10.7 96 94-221 215-319 (591)
37 PRK07338 hypothetical protein; 96.1 0.12 2.5E-06 53.5 14.0 117 94-226 41-178 (402)
38 PRK13799 unknown domain/N-carb 96.0 0.044 9.5E-07 60.5 10.7 97 94-222 215-320 (591)
39 PRK06915 acetylornithine deace 96.0 0.11 2.4E-06 54.1 13.1 139 73-224 18-181 (422)
40 PRK06837 acetylornithine deace 95.9 0.12 2.7E-06 54.1 13.4 137 75-223 23-184 (427)
41 PRK13004 peptidase; Reviewed 95.9 0.15 3.2E-06 52.9 13.5 117 73-224 16-158 (399)
42 PRK09104 hypothetical protein; 95.8 0.12 2.6E-06 54.7 13.1 124 74-226 19-177 (464)
43 PRK04443 acetyl-lysine deacety 95.8 0.12 2.7E-06 52.5 12.6 115 74-226 8-137 (348)
44 PRK07205 hypothetical protein; 95.8 0.13 2.9E-06 54.1 12.8 127 65-225 4-164 (444)
45 PRK05469 peptidase T; Provisio 95.6 0.14 3E-06 53.3 12.1 100 94-224 33-186 (408)
46 TIGR01902 dapE-lys-deAc N-acet 95.6 0.095 2.1E-06 52.9 10.5 110 78-226 3-127 (336)
47 PRK00466 acetyl-lysine deacety 95.5 0.13 2.8E-06 52.3 11.2 111 73-225 11-136 (346)
48 COG0624 ArgE Acetylornithine d 95.5 0.2 4.4E-06 51.9 12.9 123 78-227 19-166 (409)
49 PRK08201 hypothetical protein; 95.5 0.18 3.9E-06 53.3 12.7 103 94-226 41-169 (456)
50 PRK08651 succinyl-diaminopimel 95.5 0.13 2.8E-06 52.8 11.3 130 72-226 6-160 (394)
51 PRK13007 succinyl-diaminopimel 95.4 0.18 3.8E-06 51.0 11.7 114 73-225 8-141 (352)
52 PLN02693 IAA-amino acid hydrol 95.0 0.31 6.6E-06 51.9 12.5 119 72-225 47-183 (437)
53 TIGR01880 Ac-peptdase-euk N-ac 94.7 0.6 1.3E-05 48.3 13.7 123 74-224 11-160 (400)
54 TIGR03526 selenium_YgeY putati 94.7 0.56 1.2E-05 48.6 13.3 117 73-224 14-156 (395)
55 TIGR01891 amidohydrolases amid 94.4 0.5 1.1E-05 48.3 12.0 117 76-225 3-137 (363)
56 PRK15026 aminoacyl-histidine d 94.4 1.5 3.2E-05 47.6 16.0 182 74-304 12-232 (485)
57 PRK07318 dipeptidase PepV; Rev 94.2 0.53 1.2E-05 50.1 12.1 48 177-225 117-166 (466)
58 KOG2195 Transferrin receptor a 94.1 0.15 3.2E-06 57.6 8.0 225 144-375 336-575 (702)
59 TIGR01246 dapE_proteo succinyl 94.1 0.67 1.5E-05 47.3 12.2 114 77-223 4-143 (370)
60 PRK08554 peptidase; Reviewed 93.4 1.1 2.4E-05 47.6 12.7 98 94-225 28-149 (438)
61 TIGR03320 ygeY M20/DapE family 93.2 1.5 3.2E-05 45.4 13.1 117 73-224 14-156 (395)
62 PLN02280 IAA-amino acid hydrol 93.2 1.3 2.9E-05 47.8 13.1 96 94-224 118-232 (478)
63 KOG2526 Predicted aminopeptida 92.9 0.33 7.3E-06 51.8 7.7 80 144-223 191-287 (555)
64 PRK07079 hypothetical protein; 92.0 2.5 5.4E-05 45.0 13.1 126 74-226 19-177 (469)
65 TIGR01886 dipeptidase dipeptid 91.3 2.5 5.5E-05 45.2 12.3 97 95-226 47-166 (466)
66 TIGR01887 dipeptidaselike dipe 91.0 2.7 5.9E-05 44.8 12.2 98 94-226 35-155 (447)
67 PRK06156 hypothetical protein; 89.5 9.2 0.0002 41.6 14.8 51 178-228 154-205 (520)
68 PF09940 DUF2172: Domain of un 89.2 1.7 3.6E-05 45.9 8.5 76 146-227 115-190 (386)
69 TIGR01900 dapE-gram_pos succin 88.1 3.2 6.9E-05 42.9 9.8 99 94-225 17-155 (373)
70 KOG3946 Glutaminyl cyclase [Po 83.0 8.2 0.00018 39.6 9.4 102 93-221 72-185 (338)
71 COG4187 RocB Arginine degradat 82.8 17 0.00038 39.5 12.1 135 72-226 8-188 (553)
72 PRK08737 acetylornithine deace 79.3 26 0.00057 36.2 12.0 113 73-226 7-145 (364)
73 PF01546 Peptidase_M20: Peptid 78.3 8.5 0.00018 34.7 7.2 147 174-369 32-189 (189)
74 KOG2275 Aminoacylase ACY1 and 70.0 54 0.0012 35.3 11.5 118 76-223 30-176 (420)
75 PF05343 Peptidase_M42: M42 gl 65.7 21 0.00046 36.2 7.4 102 178-317 134-245 (292)
76 COG1473 AbgB Metal-dependent a 63.0 1E+02 0.0022 32.9 12.1 118 74-224 14-149 (392)
77 PRK09961 exoaminopeptidase; Pr 57.2 53 0.0011 34.1 8.6 104 177-318 165-279 (344)
78 TIGR03106 trio_M42_hydro hydro 48.5 73 0.0016 33.2 8.0 66 74-173 5-70 (343)
79 PRK09864 putative peptidase; P 45.3 1.3E+02 0.0028 31.7 9.3 101 177-318 174-287 (356)
80 TIGR03107 glu_aminopep glutamy 43.0 1.5E+02 0.0032 31.1 9.3 100 177-314 177-284 (350)
81 TIGR03107 glu_aminopep glutamy 36.2 1E+02 0.0022 32.2 6.9 63 78-173 4-66 (350)
82 PRK09961 exoaminopeptidase; Pr 35.6 1E+02 0.0023 31.9 6.8 62 77-173 5-66 (344)
83 COG1363 FrvX Cellulase M and r 28.6 1.6E+02 0.0036 31.1 6.9 65 74-172 4-68 (355)
84 PF10096 DUF2334: Uncharacteri 28.6 26 0.00056 34.6 1.0 29 370-405 65-95 (243)
85 COG4310 Uncharacterized protei 28.0 1.1E+02 0.0024 32.2 5.4 65 157-226 174-238 (435)
86 PF12357 PLD_C: Phospholipase 27.3 47 0.001 27.5 2.1 44 355-400 12-55 (74)
87 TIGR03106 trio_M42_hydro hydro 25.0 3.7E+02 0.0081 28.0 8.7 103 177-318 182-289 (343)
88 PF15027 DUF4525: Domain of un 24.3 1.1E+02 0.0025 27.9 4.1 57 26-90 10-67 (138)
89 PHA02673 ORF109 EEV glycoprote 24.2 68 0.0015 30.3 2.8 38 7-45 21-58 (161)
90 COG2361 Uncharacterized conser 21.7 1.4E+02 0.0031 26.8 4.2 65 295-366 12-81 (117)
91 PLN02594 phosphatidate cytidyl 21.5 1.1E+02 0.0023 32.4 3.8 34 10-43 53-86 (342)
92 PRK09864 putative peptidase; P 20.1 2.7E+02 0.0059 29.3 6.6 61 77-173 5-65 (356)
No 1
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7e-67 Score=546.63 Aligned_cols=309 Identities=34% Similarity=0.477 Sum_probs=256.0
Q ss_pred ccccchHHHHHHHHHHhchhhHHHHHHHHHHHHHhcc--cCCCcceeeccCCCCcceeeecCchhHHHHHHHHHHHhhhh
Q 013160 8 KKRKRPIVRLAVLLLSHSVLVSVICCTAGVFGLLLLP--VLAKNTYISENALMPGSASSMLSNQEVSEANKLIKELNNLH 85 (448)
Q Consensus 8 ~~~~r~i~rl~~~l~~~~~~lS~ll~l~GI~wll~LP--~l~r~TYISENALlPG~v~s~f~~~d~~~a~~y~~~l~~l~ 85 (448)
++|+|+++|+...+++ .++++++++|+.|+++|+ .+.++|||||||||||||+++|+..+++.+++|.+++++++
T Consensus 7 ~~~~~~~~~l~~r~ia---~lpv~s~v~g~awf~aL~~~pl~~rtyiSEnAlmpg~v~s~~~~~~~~~~~~~~~~~~~~r 83 (617)
T KOG3566|consen 7 PIRQIPLVRLLIRHIA---HLPVFSYVAGLAWFFALALLPLLKRTYISENALMPGQVYSYFRNRDVSDASKLLKDIKNFR 83 (617)
T ss_pred chhhHHhHHHHHhhcc---cchHHHHHHHHHHHHHHhhchhcccceeeccccCccchhhhhhccchhhhHHHHHHHHHHH
Confidence 4788999997544444 555556666666666543 35699999999999999999999999999999999999988
Q ss_pred cCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEE
Q 013160 86 SNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIV 165 (448)
Q Consensus 86 ~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIV 165 (448)
. .... .+..|+...|++.|+|++.|+|+.. ++ ..+.|+|||||+||||||||||||
T Consensus 84 ~-~~s~--~~~~~~~~~~q~FGl~t~~~n~~~~----------------P~-----e~y~G~NvyGilRAPRgdgtEsiv 139 (617)
T KOG3566|consen 84 K-HESQ--VPNAWAEVSMQEFGLETHTQNYSNG----------------PF-----EEYSGENVYGILRAPRGDGTESIV 139 (617)
T ss_pred H-hhcc--cchhHHHHHHHHhCccccccCccCC----------------ch-----hhcCCceEEEEEecCCCCCcceEE
Confidence 7 3322 5789999999999999999997632 11 136699999999999999999999
Q ss_pred EEEEeecCCCCccccchHHHHHHHHHHhccCCccccceEEEeeCCCCCCchhHHHHHHhhcCCCCCCCCCCcccccccCC
Q 013160 166 LVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGN 245 (448)
Q Consensus 166 Lvap~~~~~~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~~~g~~~G~~AWL~aYH~~~~~~~~~~~~~~~~~~~ 245 (448)
|+|||+..+++ | ..|+++++||++||+||+||||||||||+|+ +..|++|||++||++.. ... .+..+
T Consensus 140 l~vP~~~~~~~-~-~~~v~l~lsla~~f~r~~yWsKDII~v~~d~---~~~g~~AwLeaYhd~~s--~~~----~~~ep- 207 (617)
T KOG3566|consen 140 LVVPYGRSSGS-N-SASVALLLSLADYFSRWVYWSKDIIFVFTDG---PALGLDAWLEAYHDILS--LTG----ISVEP- 207 (617)
T ss_pred EEEecccCCCc-c-hhHHHHHHHHHHHhcCCeeecccEEEEEeCC---ccccHHHHHHHhhcccc--ccc----ccccc-
Confidence 99999988776 4 5799999999999999999999999999997 78999999999999521 111 11111
Q ss_pred CCccccccccccchhhhheeeEEeecCCCCCcceEEEEEeecCCCCCChhHHHHHHHHHhhccCccccccccccccchhh
Q 013160 246 NNFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFHWLLNSKW 325 (448)
Q Consensus 246 ~~~~~~~~~~~~RaGsIqAAlvLe~~~~~~~~d~l~I~~EG~NGqLPNLDLiN~v~~la~~~~G~~v~l~~~~~~~~~~w 325 (448)
.....|+|+++||+++|+++. ..|.++|.+||+|||||||||+|+. +++.+++|+.|++++..
T Consensus 208 -------~~i~~ragal~aal~l~~se~--~~d~v~i~~eglNGqlPNLDlf~i~-~~~~~k~g~~v~l~g~~------- 270 (617)
T KOG3566|consen 208 -------DEIQARAGALAAALVLEVSEK--FQDIVEIQYEGLNGQLPNLDLFNIT-QIFMQKEGLLVTLQGKL------- 270 (617)
T ss_pred -------ccccccccceeeEEEEEeccc--cceeEEEEecccCCCCCcchHHHHH-HHHHHhcCceEEEecCc-------
Confidence 223479999999999999955 6899999999999999999999666 55566789999999963
Q ss_pred hhhhHHHHHHHhhhhhhhCCCcccCCChhhHHHHHHHHHHHHhhhhccceehhhhhhhhhhhccceeEEeeeee
Q 013160 326 VKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQVVFSLVVKLIVLHLALSLTHTHTVSGEVG 399 (448)
Q Consensus 326 l~~l~~~~~~i~k~~~~~~~~~~~~~~~~~y~~~~~~l~~s~~~QalG~~~~~~~~~h~~~~~~h~~~~~~~~~ 399 (448)
..++|.. -.+|.+|.++|++.|+.||.|+| .|.|| ++|+|||++=..
T Consensus 271 -----------------~~~d~~s---~~~~~s~l~tl~~~l~~QA~g~p----tg~Hg---lf~~Y~vdaLTl 317 (617)
T KOG3566|consen 271 -----------------LPLDWHS---NSMYLSGLKTLLLMLLTQASGSP----TGIHG---LFLRYRVDALTL 317 (617)
T ss_pred -----------------CCccccc---CchhhhhHHHHHHHHHHHHhcCC----CCccc---cccccccceEEe
Confidence 3445633 34999999999999999999999 88899 799999999766
No 2
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=100.00 E-value=2.8e-50 Score=427.36 Aligned_cols=194 Identities=35% Similarity=0.491 Sum_probs=164.7
Q ss_pred ccceEEEEEcCCCCCCceeEEEEEEeecCCCCccccchHHHHHHHHHHhccCCccccceEEEeeCCCCCCchhHHHHHHh
Q 013160 145 YGINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRD 224 (448)
Q Consensus 145 ~G~NvygIlRAPRgdGtEAIVLvap~~~~~~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~~~g~~~G~~AWL~a 224 (448)
+|+|+|||+|||||||||||||+|||++.+++.| ..|+|+++||+|||+|++||||||||||+|+ +..|++|||++
T Consensus 2 ~G~nvy~i~rapR~d~tEaivl~~~~~~~~~~~n-~~~v~l~lal~~~~~~~~~wsKDii~l~~~~---~~~g~~awl~~ 77 (504)
T PF04114_consen 2 SGTNVYGILRAPRGDGTEAIVLVVPWRDSDGEYN-AGGVALALALARYFRRQSYWSKDIIFLFTDD---ELAGMQAWLEA 77 (504)
T ss_pred CceEEEEEEecCCCCCceeEEEEEecCCCCcccc-hhhHHHHHHHHHHhhhchhhhccEEEEecCC---cchHHHHHHHH
Confidence 6999999999999999999999999999887555 7899999999999999999999999999996 57999999999
Q ss_pred hcCCCCCCCCCCcccccccCCCCccccccccccchhhhheeeEEeecCCCCCcceEEEEEeecCCCCCChhHHHHHHHHH
Q 013160 225 YHTPAFSNLDSLNTETCHVGNNNFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLA 304 (448)
Q Consensus 225 YH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~RaGsIqAAlvLe~~~~~~~~d~l~I~~EG~NGqLPNLDLiN~v~~la 304 (448)
||+.+.++... ...+.|+|+||||++||+++. .+++++|++||+|||||||||||++++++
T Consensus 78 Yh~~~~~~~~~-----------------~~l~~~~G~i~aAl~le~~~~--~~~~v~i~~eG~NGqLPNLDL~N~~~~i~ 138 (504)
T PF04114_consen 78 YHDSNTKGLSS-----------------SPLPLRAGSIQAALVLEYPSD--SFSSVEIKYEGLNGQLPNLDLVNTVVRIA 138 (504)
T ss_pred HhCCCCccccc-----------------cCCCCCCcceeEEEEEEecCC--CccEEEEEEecCCCCCCCchHHHHHHHHH
Confidence 99975432221 124479999999999999976 46779999999999999999999999999
Q ss_pred hhccCccccccccccccchhhhhhhHHHHHHHhhhhhhhCCCcccCCChhhHHHHHHHHHHHHhhhhccceehhhhhhhh
Q 013160 305 VHRQGLRVKVEQFHWLLNSKWVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQVVFSLVVKLIVLHL 384 (448)
Q Consensus 305 ~~~~G~~v~l~~~~~~~~~~wl~~l~~~~~~i~k~~~~~~~~~~~~~~~~~y~~~~~~l~~s~~~QalG~~~~~~~~~h~ 384 (448)
++ +|+++.++...... +| .+..+|..+.++|+++|++||+|+| .|.|+
T Consensus 139 ~~-~gi~~~~~~~~~~~------------------------~~---~~~~~~~~~l~~l~~~~~~~a~g~p----~g~H~ 186 (504)
T PF04114_consen 139 EK-EGIPMGVSLHLQPS------------------------DW---HSNSDYESRLKTLLRGMLNQALGGP----TGPHG 186 (504)
T ss_pred Hh-cCCCcccccccccc------------------------cc---ccccchHHHHHHHHHHHHHhccCCC----CCCch
Confidence 86 46666544331111 12 2346899999999999999999999 89999
Q ss_pred hhhccceeEEee
Q 013160 385 ALSLTHTHTVSG 396 (448)
Q Consensus 385 ~~~~~h~~~~~~ 396 (448)
.||+|+|.+
T Consensus 187 ---~f~~y~I~a 195 (504)
T PF04114_consen 187 ---AFLRYRIDA 195 (504)
T ss_pred ---hhhhcCccE
Confidence 699998876
No 3
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=98.82 E-value=6.8e-08 Score=99.38 Aligned_cols=118 Identities=13% Similarity=0.227 Sum_probs=90.0
Q ss_pred cchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeec
Q 013160 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (448)
Q Consensus 93 ~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~ 172 (448)
...++||.++|+++|+++..|.|+.+.. +..... ..+. ....|.||+|.+++ .+.|.||+++|||+
T Consensus 55 ~~aA~yL~~~f~~lG~~v~~q~f~~~~~-------~~~~~g---~~~~-~~~~g~nVIa~~~G---~~~~~Ill~AH~DT 120 (346)
T PRK10199 55 MLSADYLRQQFQQMGYQSDIRTFNSRYI-------YTARDN---RKNW-HNVTGSTVIAAHEG---KAPQQIIIMAHLDT 120 (346)
T ss_pred HHHHHHHHHHHHHCCCceEeeeccccce-------eecccc---cccc-cCCccceEEEEECC---CCCCeEEEEEEcCc
Confidence 3578999999999999999888764310 011000 0111 13568999999865 45689999999997
Q ss_pred C-----------------CCCccccchHHHHHHHHHHhccCCccccceEEEeeCCCCCCchhHHHHHHhh
Q 013160 173 V-----------------KGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDY 225 (448)
Q Consensus 173 ~-----------------~~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~~~g~~~G~~AWL~aY 225 (448)
. .|..|+++|+|.+|.+++.|++.+ ..++|.|+++++++.+..|.++|++..
T Consensus 121 V~p~~~~~~~~~~~g~~~~GA~DnasGvA~lLe~ar~l~~~~-~~~~I~fv~~~~EE~Gl~GS~~~~~~~ 189 (346)
T PRK10199 121 YAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAERLKNVP-TEYGIRFVATSGEEEGKLGAENLLKRM 189 (346)
T ss_pred CCCCCCCccccCCCCcccCCccccHHHHHHHHHHHHHHhhCC-CCCcEEEEEECCcccCcHHHHHHHHhc
Confidence 4 256777899999999999998766 468999999988888899999999864
No 4
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.19 E-value=3.8e-06 Score=76.94 Aligned_cols=64 Identities=16% Similarity=0.210 Sum_probs=52.2
Q ss_pred eeEEEEEEeecC---------CCCccccchHHHHHHHHHHhccCC-ccccceEEEeeCCCCCCchhHHHHHHhh
Q 013160 162 EAIVLVTPYNAV---------KGGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRDY 225 (448)
Q Consensus 162 EAIVLvap~~~~---------~~~~~~a~gval~LaLa~yl~r~~-~wAKDIIfv~~D~~~g~~~G~~AWL~aY 225 (448)
|.|||+++||+. .|+.+|+.|++++|.+||.|++.. -..|+|+||+.|+++.+..|.++|++..
T Consensus 1 e~ivi~aH~Ds~~~~~~~~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~~~~~ 74 (179)
T PF04389_consen 1 EYIVIGAHYDSVGGDADGSWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAFVEHD 74 (179)
T ss_dssp EEEEEEEE--BESCCC-TCSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHHHHHH
T ss_pred CEEEEEeecCCCCCcCCCcccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHHHHhh
Confidence 889999999983 355677999999999999999842 2368999999999988899999999943
No 5
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.70 E-value=0.00017 Score=81.19 Aligned_cols=162 Identities=17% Similarity=0.243 Sum_probs=100.1
Q ss_pred CCCcceeeccCCCCcceeeecCchhHHHHHHHHHHHhhhhcCCCCCc---cchHHHHHHHHHhcCCceee--eecccCCc
Q 013160 46 LAKNTYISENALMPGSASSMLSNQEVSEANKLIKELNNLHSNPLGAT---TESHGIIAKYMSNLGAQVNN--HKFHPQLN 120 (448)
Q Consensus 46 l~r~TYISENALlPG~v~s~f~~~d~~~a~~y~~~l~~l~~~~~~~~---~~~~~~l~~~l~~lGLev~~--q~f~~~~~ 120 (448)
+.++....+-+..|+| |+.+. |.+-..++...-..+..+. ....+++.+++.++.-.... ++.+....
T Consensus 38 ~~~pl~~~~e~~~~~~----f~~~r---A~~~l~~ls~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q 110 (834)
T KOG2194|consen 38 LPEPLTQPQEQTLPSQ----FSEAR---ALKDLLSLSAAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQ 110 (834)
T ss_pred ccccCCCcchhcCchh----hHHHH---HHHHHHHHHhcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheecee
Confidence 4666666666666664 44443 4444555555433332221 23567887777766533222 11111000
Q ss_pred ccCCCccccCCCCCccccCCccc-cccceEEEEEcCCCCCCceeEEEEEEeecC---CCCccccchHHHHHHHHHHhccC
Q 013160 121 QFHPLHFFSGPDSGVMQENSTRS-LYGINTVGIIRAPRGDGKEAIVLVTPYNAV---KGGVRETLSLGIAYSVFSLLTRV 196 (448)
Q Consensus 121 ~f~p~~ffss~~~~~~~~n~~~~-~~G~NvygIlRAPRgdGtEAIVLvap~~~~---~~~~~~a~gval~LaLa~yl~r~ 196 (448)
. . ++++ ..++.+.. ....||.--+-.--++.+++++|.++||+. .|+.++..++|.+|.++|++.+.
T Consensus 111 -~-~------sg~~-~~~~~~~~Y~~i~NIvVki~~k~~~~~~~lLlnaHfDSvpt~~gAtDDg~~va~mLe~lRv~s~~ 181 (834)
T KOG2194|consen 111 -S-A------SGSF-ILEGMTLVYQNISNIVVKISPKNGNDKNALLLNAHFDSVPTGPGATDDGSGVASMLEALRVLSKS 181 (834)
T ss_pred -e-c------ccee-eehhhhheeeeeeeEEEecCCCCCCccceeeeeccccccCCCCCCCcchhHHHHHHHHHHHhhcC
Confidence 0 0 0011 11122111 346777776666666777799999999985 45567789999999999999774
Q ss_pred -CccccceEEEeeCCCCCCchhHHHHHH
Q 013160 197 -TWLAKDIIWLVADSQYGEYAPVAAWLR 223 (448)
Q Consensus 197 -~~wAKDIIfv~~D~~~g~~~G~~AWL~ 223 (448)
+-+-+||||+|-+.++..+.|.++|+.
T Consensus 182 ~~~l~~~vVFLfNgaEE~~L~gsH~FIt 209 (834)
T KOG2194|consen 182 DKLLTHSVVFLFNGAEESGLLGSHAFIT 209 (834)
T ss_pred CCcccccEEEEecCcccchhhhccccee
Confidence 667899999999998888899988865
No 6
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=97.27 E-value=0.0045 Score=64.59 Aligned_cols=125 Identities=16% Similarity=0.204 Sum_probs=83.4
Q ss_pred HHHHHHHHHhhhhcCCCCC--ccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEE
Q 013160 73 EANKLIKELNNLHSNPLGA--TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTV 150 (448)
Q Consensus 73 ~a~~y~~~l~~l~~~~~~~--~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~Nvy 150 (448)
.+.++.+++-+..+.+..+ .....+||.++|+++|+++..+... ...+.|++
T Consensus 38 ~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~--------------------------~~~~~~li 91 (410)
T PRK06133 38 AYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTP--------------------------PSAGDMVV 91 (410)
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccC--------------------------CCCCCeEE
Confidence 4445555555554433221 1246899999999999998654321 12357999
Q ss_pred EEEcCCCCCCceeEEEEEEeecCC--------------------CCccccchHHHHHHHHHHhccCCc-cccceEEEeeC
Q 013160 151 GIIRAPRGDGKEAIVLVTPYNAVK--------------------GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVAD 209 (448)
Q Consensus 151 gIlRAPRgdGtEAIVLvap~~~~~--------------------~~~~~a~gval~LaLa~yl~r~~~-wAKDIIfv~~D 209 (448)
+.+... +.-.|++.+++|..- |..+...+++.+++.++++++... +..+|.|+|+-
T Consensus 92 a~~~g~---~~~~ill~~H~D~Vp~~~~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 168 (410)
T PRK06133 92 ATFKGT---GKRRIMLIAHMDTVYLPGMLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNP 168 (410)
T ss_pred EEECCC---CCceEEEEeecCccCCCCccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEC
Confidence 998542 234799999987652 112335689999999999988654 34799999964
Q ss_pred CCCCCchhHHHHHHhhc
Q 013160 210 SQYGEYAPVAAWLRDYH 226 (448)
Q Consensus 210 ~~~g~~~G~~AWL~aYH 226 (448)
+++.+..|++.+++++.
T Consensus 169 dEE~g~~G~~~~~~~~~ 185 (410)
T PRK06133 169 DEETGSPGSRELIAELA 185 (410)
T ss_pred CcccCCccHHHHHHHHh
Confidence 44444579999998864
No 7
>PRK08596 acetylornithine deacetylase; Validated
Probab=97.26 E-value=0.004 Score=65.12 Aligned_cols=126 Identities=19% Similarity=0.219 Sum_probs=83.5
Q ss_pred HHHHHHHHHHhhhhcCCCC--CccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceE
Q 013160 72 SEANKLIKELNNLHSNPLG--ATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINT 149 (448)
Q Consensus 72 ~~a~~y~~~l~~l~~~~~~--~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~Nv 149 (448)
+.+.++.++|-+..+.+.. ...+..+||+++|+++|+++..+... ....|+
T Consensus 13 ~~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~---------------------------~~~~nv 65 (421)
T PRK08596 13 DELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVY---------------------------PNDPNV 65 (421)
T ss_pred HHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEcc---------------------------CCCceE
Confidence 3455566666655544321 22346899999999999987655421 123599
Q ss_pred EEEEcCCCCCCceeEEEEEEeecCC------------------------CCccccchHHHHHHHHHHhccCC-ccccceE
Q 013160 150 VGIIRAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVT-WLAKDII 204 (448)
Q Consensus 150 ygIlRAPRgdGtEAIVLvap~~~~~------------------------~~~~~a~gval~LaLa~yl~r~~-~wAKDII 204 (448)
++.+++-..++...|+|..++|... |..|..++++.++..++.+++.. -+..||+
T Consensus 66 ia~~~g~~~~~~~~lll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~ 145 (421)
T PRK08596 66 VGVKKGTESDAYKSLIINGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLI 145 (421)
T ss_pred EEEecCCCCCCCcEEEEeccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEE
Confidence 9998642122234699999887521 12234578888888888887764 3678999
Q ss_pred EEeeCCCCCCchhHHHHHHh
Q 013160 205 WLVADSQYGEYAPVAAWLRD 224 (448)
Q Consensus 205 fv~~D~~~g~~~G~~AWL~a 224 (448)
|+|+-+++.+..|++.+++.
T Consensus 146 ~~~~~dEE~g~~G~~~~~~~ 165 (421)
T PRK08596 146 FQSVIGEEVGEAGTLQCCER 165 (421)
T ss_pred EEEEeccccCCcCHHHHHhc
Confidence 99974455455799999876
No 8
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=97.20 E-value=0.0031 Score=63.71 Aligned_cols=119 Identities=16% Similarity=0.140 Sum_probs=79.6
Q ss_pred HHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCC
Q 013160 79 KELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRG 158 (448)
Q Consensus 79 ~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRg 158 (448)
++|-+..+.+.+...+..+||.++|+++|+++..+...+ ...+.|+++.+.+
T Consensus 4 ~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~-------------------------~~~~~nl~~~~~~--- 55 (364)
T TIGR01892 4 TKLVAFDSTSFRPNVDLIDWAQAYLEALGFSVEVQPFPD-------------------------GAEKSNLVAVIGP--- 55 (364)
T ss_pred HHhhCcCCcCCccHHHHHHHHHHHHHHcCCeEEEEeCCC-------------------------CCccccEEEEecC---
Confidence 344444433322213578999999999999887654210 1135799999843
Q ss_pred CCceeEEEEEEeecCC-----------------------CCccccchHHHHHHHHHHhccCCccccceEEEeeCCCCCCc
Q 013160 159 DGKEAIVLVTPYNAVK-----------------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEY 215 (448)
Q Consensus 159 dGtEAIVLvap~~~~~-----------------------~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~~~g~~ 215 (448)
.+...|+|.++.|... |..+.-.+++.+|+.+++|++.. +..+|.|+|+-+++.+.
T Consensus 56 ~~~~~i~l~~H~Dtvp~~~~~w~~~Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~~-~~~~v~~~~~~~EE~g~ 134 (364)
T TIGR01892 56 SGAGGLALSGHTDVVPYDDAAWTRDPFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAEQ-LKKPLHLALTADEEVGC 134 (364)
T ss_pred CCCCeEEEEcccccccCCCCcCCCCCCcceeeCCEEEecCccccchHHHHHHHHHHHHHhcC-cCCCEEEEEEeccccCC
Confidence 2445799998876531 11233467899999999998765 57899999964444445
Q ss_pred hhHHHHHHhhc
Q 013160 216 APVAAWLRDYH 226 (448)
Q Consensus 216 ~G~~AWL~aYH 226 (448)
.|++..++++.
T Consensus 135 ~G~~~~~~~~~ 145 (364)
T TIGR01892 135 TGAPKMIEAGA 145 (364)
T ss_pred cCHHHHHHhcC
Confidence 79999998874
No 9
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=97.20 E-value=0.0038 Score=63.30 Aligned_cols=122 Identities=11% Similarity=0.097 Sum_probs=80.8
Q ss_pred HHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcC
Q 013160 76 KLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRA 155 (448)
Q Consensus 76 ~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRA 155 (448)
++.++|-+....+..+ .+..+||.++|+++|+++..+..... ...+.|+++++++
T Consensus 4 ~~~~~l~~i~s~s~~e-~~~~~~l~~~l~~~g~~~~~~~~~~~------------------------~~~~~~~~~~~~g 58 (361)
T TIGR01883 4 KYFLELIQIDSESGKE-KAILTYLKKQITKLGIPVSLDEVPAE------------------------VSNDNNLIARLPG 58 (361)
T ss_pred HHHHHHeecCCCCCcH-HHHHHHHHHHHHHcCCEEEEeccccc------------------------cCCCceEEEEEeC
Confidence 3445555544433332 35789999999999998765542100 1235799999975
Q ss_pred CCCCCceeEEEEEEeecCCC-----------------C----ccccchHHHHHHHHHHhccCCccccceEEEeeCCCCCC
Q 013160 156 PRGDGKEAIVLVTPYNAVKG-----------------G----VRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGE 214 (448)
Q Consensus 156 PRgdGtEAIVLvap~~~~~~-----------------~----~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~~~g~ 214 (448)
. ++...|+|.++.|.... . .+...+++.+|.+++.+++..-+..+|.|+|+=+++.+
T Consensus 59 ~--~~~~~i~l~~H~D~V~~~~~~~~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~~~~~~v~~~~~~~EE~g 136 (361)
T TIGR01883 59 T--VKFDTIFFCGHMDTVPPGAGPEPVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEETPHGTIEFIFTVKEELG 136 (361)
T ss_pred C--CCCCcEEEEeeccccCCCCCCCceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccC
Confidence 3 22357999999876321 1 23357899999999999775445679999996444445
Q ss_pred chhHHHHHHh
Q 013160 215 YAPVAAWLRD 224 (448)
Q Consensus 215 ~~G~~AWL~a 224 (448)
..|++.|++.
T Consensus 137 ~~G~~~~~~~ 146 (361)
T TIGR01883 137 LIGMRLFDES 146 (361)
T ss_pred chhHhHhChh
Confidence 6799988764
No 10
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=97.14 E-value=0.0035 Score=65.12 Aligned_cols=100 Identities=15% Similarity=0.088 Sum_probs=75.3
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeecC
Q 013160 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~~ 173 (448)
..++||.++|+++|+++.... . .|++|.+++.. .+...+++..|+|..
T Consensus 32 ~~~~~l~~~~~~~G~~~~~~~------------------------------~-~nl~a~~~g~~-~~~~~l~~~~H~DtV 79 (401)
T TIGR01879 32 EAQDLFKKRMRAAGLEVRFDE------------------------------V-GNLIGRKEGTE-PPLEVVLSGSHIDTV 79 (401)
T ss_pred HHHHHHHHHHHHCCCEEEEec------------------------------C-CcEEEEecCCC-CCCCEEEEecccccC
Confidence 478999999999999885321 1 29999996532 123689999999886
Q ss_pred --CCCccccchHHHHHHHHHHhccCCc-cccceEEEeeCCCCC-----CchhHHHHHHhh
Q 013160 174 --KGGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYG-----EYAPVAAWLRDY 225 (448)
Q Consensus 174 --~~~~~~a~gval~LaLa~yl~r~~~-wAKDIIfv~~D~~~g-----~~~G~~AWL~aY 225 (448)
.+..++..|++.++..++.+++... +.+||.|+++-++++ ...|.+.|+...
T Consensus 80 ~~gg~~dg~~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~ 139 (401)
T TIGR01879 80 VNGGNFDGQLGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLA 139 (401)
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhccc
Confidence 3344556789999999999988755 689999999755544 567888887643
No 11
>PRK09133 hypothetical protein; Provisional
Probab=97.04 E-value=0.01 Score=62.94 Aligned_cols=129 Identities=21% Similarity=0.205 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHhhhhcCCC-CCccchHHHHHHHHHhcCCceeeee-cccCCcccCCCccccCCCCCccccCCccccccce
Q 013160 71 VSEANKLIKELNNLHSNPL-GATTESHGIIAKYMSNLGAQVNNHK-FHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGIN 148 (448)
Q Consensus 71 ~~~a~~y~~~l~~l~~~~~-~~~~~~~~~l~~~l~~lGLev~~q~-f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~N 148 (448)
...+.++.++|-+..+.+. +......+||.++|+++|+++.... +.. .....|
T Consensus 36 ~~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~-------------------------~~~~~n 90 (472)
T PRK09133 36 QQAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGP-------------------------YPRKGN 90 (472)
T ss_pred HHHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccC-------------------------CCCcee
Confidence 3345566666666655431 2223578999999999999864322 110 013469
Q ss_pred EEEEEcCCCCCCceeEEEEEEeecC-----------------------CCCccccchHHHHHHHHHHhccCC-ccccceE
Q 013160 149 TVGIIRAPRGDGKEAIVLVTPYNAV-----------------------KGGVRETLSLGIAYSVFSLLTRVT-WLAKDII 204 (448)
Q Consensus 149 vygIlRAPRgdGtEAIVLvap~~~~-----------------------~~~~~~a~gval~LaLa~yl~r~~-~wAKDII 204 (448)
+++.++++. ....++|..|+|.. .|..|+.++++.++..++++++.. -..++|.
T Consensus 91 li~~~~g~~--~~~~lll~~H~DtVp~~~~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~ 168 (472)
T PRK09133 91 LVARLRGTD--PKKPILLLAHMDVVEAKREDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDII 168 (472)
T ss_pred EEEEecCCC--CCCcEEEEeecccCCCChhcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEE
Confidence 999997542 22579998888742 122345678999998888888765 3457999
Q ss_pred EEeeCCCC-CCchhHHHHHHhhc
Q 013160 205 WLVADSQY-GEYAPVAAWLRDYH 226 (448)
Q Consensus 205 fv~~D~~~-g~~~G~~AWL~aYH 226 (448)
|+++-+++ ++..|++.+++++.
T Consensus 169 ~~~~~dEE~~g~~G~~~l~~~~~ 191 (472)
T PRK09133 169 LALTGDEEGTPMNGVAWLAENHR 191 (472)
T ss_pred EEEECccccCccchHHHHHHHHh
Confidence 99975555 56789999998765
No 12
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=97.00 E-value=0.0099 Score=60.76 Aligned_cols=120 Identities=13% Similarity=0.058 Sum_probs=80.5
Q ss_pred HHHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEE
Q 013160 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (448)
Q Consensus 74 a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIl 153 (448)
+.++.++|-+..+.+.++ ....+||.++|+++|+++..+.+. ..+.|+++.+
T Consensus 4 ~~~~l~~Lv~i~s~s~~e-~~~~~~l~~~l~~~G~~~~~~~~~---------------------------~~~~~l~a~~ 55 (377)
T PRK08588 4 KIQILADIVKINSVNDNE-IEVANYLQDLFAKHGIESKIVKVN---------------------------DGRANLVAEI 55 (377)
T ss_pred HHHHHHHHhcCCCCCCcH-HHHHHHHHHHHHHCCCceEEEecC---------------------------CCCceEEEEe
Confidence 445566666665544332 367899999999999987654321 1246899887
Q ss_pred cCCCCCCceeEEEEEEeecCCC------------------------CccccchHHHHHHHHHHhccCC-ccccceEEEee
Q 013160 154 RAPRGDGKEAIVLVTPYNAVKG------------------------GVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVA 208 (448)
Q Consensus 154 RAPRgdGtEAIVLvap~~~~~~------------------------~~~~a~gval~LaLa~yl~r~~-~wAKDIIfv~~ 208 (448)
.. +...|++.+++|.... ..+...+++.++..++.|++.. .+.++|.|+|+
T Consensus 56 g~----~~~~il~~~H~DtVp~~~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~ 131 (377)
T PRK08588 56 GS----GSPVLALSGHMDVVAAGDVDKWTYDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLAT 131 (377)
T ss_pred CC----CCceEEEEeeecccCCCCcccCcCCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEE
Confidence 32 3368999998865421 1133467888777777776654 56799999997
Q ss_pred CCCCCCchhHHHHHHhh
Q 013160 209 DSQYGEYAPVAAWLRDY 225 (448)
Q Consensus 209 D~~~g~~~G~~AWL~aY 225 (448)
-+++.+..|+++++++.
T Consensus 132 ~dEE~g~~G~~~~~~~~ 148 (377)
T PRK08588 132 AGEEVGELGAKQLTEKG 148 (377)
T ss_pred cccccCchhHHHHHhcC
Confidence 44444457999999873
No 13
>PRK05111 acetylornithine deacetylase; Provisional
Probab=96.94 E-value=0.013 Score=59.87 Aligned_cols=122 Identities=13% Similarity=0.128 Sum_probs=78.9
Q ss_pred HHHHHHHHhhhhcCCCCCc------cchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccc
Q 013160 74 ANKLIKELNNLHSNPLGAT------TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGI 147 (448)
Q Consensus 74 a~~y~~~l~~l~~~~~~~~------~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~ 147 (448)
..+++++|-+..+-+..+. ....+||.++|+++|+++..+.... ...+.
T Consensus 7 ~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-------------------------~~~~~ 61 (383)
T PRK05111 7 FIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPG-------------------------TRGKF 61 (383)
T ss_pred HHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCC-------------------------CCCCc
Confidence 4455666655554443211 2368999999999999876554210 01246
Q ss_pred eEEEEEcCCCCCCceeEEEEEEeecCC-----------------------CCccccchHHHHHHHHHHhccCCccccceE
Q 013160 148 NTVGIIRAPRGDGKEAIVLVTPYNAVK-----------------------GGVRETLSLGIAYSVFSLLTRVTWLAKDII 204 (448)
Q Consensus 148 NvygIlRAPRgdGtEAIVLvap~~~~~-----------------------~~~~~a~gval~LaLa~yl~r~~~wAKDII 204 (448)
|++|.+.. +.+.|++.+++|... |..+.-++++.+++.++.|++.. ...||+
T Consensus 62 nvia~~g~----~~~~il~~~H~Dvvp~~~~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~-~~~~i~ 136 (383)
T PRK05111 62 NLLASLGS----GEGGLLLAGHTDTVPFDEGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLTK-LKKPLY 136 (383)
T ss_pred eEEEEeCC----CCCeEEEEeeeceecCCCCcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhcC-CCCCeE
Confidence 99999832 223599888776531 11223457888888888887654 468999
Q ss_pred EEeeCCCCCCchhHHHHHHhh
Q 013160 205 WLVADSQYGEYAPVAAWLRDY 225 (448)
Q Consensus 205 fv~~D~~~g~~~G~~AWL~aY 225 (448)
|+|+-+++.+..|++++++++
T Consensus 137 ~~~~~~EE~g~~G~~~~~~~~ 157 (383)
T PRK05111 137 ILATADEETSMAGARAFAEAT 157 (383)
T ss_pred EEEEeccccCcccHHHHHhcC
Confidence 999754544457999999875
No 14
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=96.79 E-value=0.01 Score=61.77 Aligned_cols=99 Identities=13% Similarity=0.134 Sum_probs=72.2
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeecC
Q 013160 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~~ 173 (448)
...+||.++|+++|+++..+ .+.|+++.+++... +...|++..|+|..
T Consensus 39 ~~~~~l~~~l~~~G~~~~~~-------------------------------~~~nlia~~~g~~~-~~~~l~~~~H~DtV 86 (414)
T PRK12890 39 AARALLAAWMRAAGLEVRRD-------------------------------AAGNLFGRLPGRDP-DLPPLMTGSHLDTV 86 (414)
T ss_pred HHHHHHHHHHHHCCCEEEEc-------------------------------CCCcEEEEeCCCCC-CCCEEEEeCcccCC
Confidence 57899999999999987532 12389999965322 33579999999986
Q ss_pred C--CCccccchHHHHHHHHHHhccCC-ccccceEEEeeCCCCC-----CchhHHHHHHh
Q 013160 174 K--GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYG-----EYAPVAAWLRD 224 (448)
Q Consensus 174 ~--~~~~~a~gval~LaLa~yl~r~~-~wAKDIIfv~~D~~~g-----~~~G~~AWL~a 224 (448)
- +..+...|++.+++.++.+++.. -+.+||+|+++-++++ ...|.+++.+.
T Consensus 87 p~~g~~D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~ 145 (414)
T PRK12890 87 PNGGRYDGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGT 145 (414)
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcc
Confidence 3 33455779999999999998754 3679999999755543 34677777654
No 15
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=96.79 E-value=0.048 Score=57.01 Aligned_cols=99 Identities=7% Similarity=-0.006 Sum_probs=69.9
Q ss_pred chHHHHHHHHHhcCCc-eeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeec
Q 013160 94 ESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLe-v~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~ 172 (448)
++++||.++|+++|++ ++... .--||+|.+++..+++...|++++|.|+
T Consensus 34 ~~a~~l~~~l~~lG~~~v~~d~------------------------------~~gnv~~~~~~~~~~~~~~i~~~aHmDT 83 (410)
T TIGR01882 34 TFGNMLVDDLKSLGLQDAHYDE------------------------------KNGYVIATIPSNTDKDVPTIGFLAHVDT 83 (410)
T ss_pred HHHHHHHHHHHHcCCceEEEcC------------------------------CceEEEEEecCCCCCCCCEEEEEEeccc
Confidence 5889999999999996 65320 1248999997754433588999999887
Q ss_pred CCC----------------------------------------------C-------ccccchHHHHHHHHHHhccC-Cc
Q 013160 173 VKG----------------------------------------------G-------VRETLSLGIAYSVFSLLTRV-TW 198 (448)
Q Consensus 173 ~~~----------------------------------------------~-------~~~a~gval~LaLa~yl~r~-~~ 198 (448)
... . .|+.+|+|.++..+++|++. .-
T Consensus 84 v~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~~ 163 (410)
T TIGR01882 84 ADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPEI 163 (410)
T ss_pred CcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCCC
Confidence 431 0 12245899999999999875 33
Q ss_pred cccceEEEeeCCCCCCchhHHHHHH
Q 013160 199 LAKDIIWLVADSQYGEYAPVAAWLR 223 (448)
Q Consensus 199 wAKDIIfv~~D~~~g~~~G~~AWL~ 223 (448)
+..+|.|+|+=+++.+ .|++.++.
T Consensus 164 ~~g~I~~~ft~dEE~g-~Ga~~l~~ 187 (410)
T TIGR01882 164 KHGTIRVAFTPDEEIG-RGAHKFDV 187 (410)
T ss_pred CCCCEEEEEECcccCC-cCcchhhh
Confidence 4679999997444433 47777654
No 16
>PRK08652 acetylornithine deacetylase; Provisional
Probab=96.70 E-value=0.018 Score=57.85 Aligned_cols=115 Identities=17% Similarity=0.151 Sum_probs=76.1
Q ss_pred HHHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEE
Q 013160 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (448)
Q Consensus 74 a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIl 153 (448)
+.+++++|-+....+.++ .+..+||.++|+++|+++..+.. + ...|+++
T Consensus 4 ~~~~~~~lv~ips~s~~e-~~~~~~l~~~l~~~G~~v~~~~~------------------------~----~~~~~~~-- 52 (347)
T PRK08652 4 AKELLKQLVKIPSPSGQE-DEIALHIMEFLESLGYDVHIESD------------------------G----EVINIVV-- 52 (347)
T ss_pred HHHHHHHHhcCCCCCCch-HHHHHHHHHHHHHcCCEEEEEec------------------------C----ceeEEEc--
Confidence 445666776666554433 36789999999999998754320 0 0234443
Q ss_pred cCCCCCCceeEEEEEEeecC---------------CCCccccchHHHHHHHHHHhccCCccccceEEEeeCCCCCCchhH
Q 013160 154 RAPRGDGKEAIVLVTPYNAV---------------KGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPV 218 (448)
Q Consensus 154 RAPRgdGtEAIVLvap~~~~---------------~~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~~~g~~~G~ 218 (448)
+. .-.|++.+++|.. .|..+...+++.+++.++.|++.. -..+|+|+|+-+++.+..|+
T Consensus 53 ----~~-~~~i~l~~H~D~vp~~~~~~~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~~-~~~~v~~~~~~dEE~g~~G~ 126 (347)
T PRK08652 53 ----NS-KAELFVEVHYDTVPVRAEFFVDGVYVYGTGACDAKGGVAAILLALEELGKEF-EDLNVGIAFVSDEEEGGRGS 126 (347)
T ss_pred ----CC-CCEEEEEccccccCCCCCCEEECCEEEeccchhhhHHHHHHHHHHHHHhhcc-cCCCEEEEEecCcccCChhH
Confidence 22 2469998888764 233444678899888888887542 23599999974444444699
Q ss_pred HHHHHhh
Q 013160 219 AAWLRDY 225 (448)
Q Consensus 219 ~AWL~aY 225 (448)
+++++++
T Consensus 127 ~~~~~~~ 133 (347)
T PRK08652 127 ALFAERY 133 (347)
T ss_pred HHHHHhc
Confidence 9999875
No 17
>PRK07906 hypothetical protein; Provisional
Probab=96.69 E-value=0.016 Score=60.48 Aligned_cols=122 Identities=15% Similarity=0.169 Sum_probs=79.2
Q ss_pred HHHHHHhhhhcCCC-----CCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEE
Q 013160 76 KLIKELNNLHSNPL-----GATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTV 150 (448)
Q Consensus 76 ~y~~~l~~l~~~~~-----~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~Nvy 150 (448)
++.++|-+..+-+. ....+..+||.++|+++|+++..+.-. ....|++
T Consensus 3 ~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~---------------------------~~~~nv~ 55 (426)
T PRK07906 3 DLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGLEPTYLESA---------------------------PGRANVV 55 (426)
T ss_pred HHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCCCeEEeecC---------------------------CCceEEE
Confidence 34455555544331 122357899999999999997654310 1246899
Q ss_pred EEEcCCCCCCceeEEEEEEeecCC-----------------------CCccccchHHHHHHHHHHhccCC-ccccceEEE
Q 013160 151 GIIRAPRGDGKEAIVLVTPYNAVK-----------------------GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWL 206 (448)
Q Consensus 151 gIlRAPRgdGtEAIVLvap~~~~~-----------------------~~~~~a~gval~LaLa~yl~r~~-~wAKDIIfv 206 (448)
+.++.. ..+...++|.+|+|... |..|+..+++.+|..++++++.. -+.++|.|+
T Consensus 56 ~~~~g~-~~~~~~lll~~H~DtVp~~~~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~ 134 (426)
T PRK07906 56 ARLPGA-DPSRPALLVHGHLDVVPAEAADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFA 134 (426)
T ss_pred EEEeCC-CCCCCcEEEEcccccCCCCcccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEE
Confidence 998642 12345799988776532 11233458999999999998764 345799999
Q ss_pred ee-CCCCCCchhHHHHHHhh
Q 013160 207 VA-DSQYGEYAPVAAWLRDY 225 (448)
Q Consensus 207 ~~-D~~~g~~~G~~AWL~aY 225 (448)
|+ |.+.+...|++.+++.+
T Consensus 135 ~~~dEE~g~~~g~~~l~~~~ 154 (426)
T PRK07906 135 FVADEEAGGTYGAHWLVDNH 154 (426)
T ss_pred EecCcccchhhhHHHHHHHH
Confidence 96 54433446888888765
No 18
>PRK07522 acetylornithine deacetylase; Provisional
Probab=96.68 E-value=0.028 Score=57.48 Aligned_cols=123 Identities=11% Similarity=0.067 Sum_probs=81.3
Q ss_pred HHHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEE
Q 013160 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (448)
Q Consensus 74 a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIl 153 (448)
+.++.++|-+..+.+.....+..+||.++|+++|+++..+.-. ...+.|+++.+
T Consensus 6 ~~~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~--------------------------~~~~~nv~a~~ 59 (385)
T PRK07522 6 SLDILERLVAFDTVSRDSNLALIEWVRDYLAAHGVESELIPDP--------------------------EGDKANLFATI 59 (385)
T ss_pred HHHHHHHHhCCCCcCCCccHHHHHHHHHHHHHcCCeEEEEecC--------------------------CCCcccEEEEe
Confidence 4566667766665543322367899999999999987654210 01246899987
Q ss_pred cCCCCCCceeEEEEEEeecCC-----------------------CCccccchHHHHHHHHHHhccCCccccceEEEeeCC
Q 013160 154 RAPRGDGKEAIVLVTPYNAVK-----------------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADS 210 (448)
Q Consensus 154 RAPRgdGtEAIVLvap~~~~~-----------------------~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~ 210 (448)
+. +..-.++|.+|.|... |..+.-.+++.+++.++.|++.. +.++|.|+|+-+
T Consensus 60 ~~---~~~~~ill~~H~Dtv~~~~~~W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~-~~~~i~~~~~~d 135 (385)
T PRK07522 60 GP---ADRGGIVLSGHTDVVPVDGQAWTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAAP-LRRPLHLAFSYD 135 (385)
T ss_pred CC---CCCCeEEEEeecccccCCCCCCCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhCC-CCCCEEEEEEec
Confidence 43 1224699999887421 11223467888888888887765 468999999633
Q ss_pred CCCCchhHHHHHHhhc
Q 013160 211 QYGEYAPVAAWLRDYH 226 (448)
Q Consensus 211 ~~g~~~G~~AWL~aYH 226 (448)
++.+..|++..++++.
T Consensus 136 EE~g~~G~~~l~~~~~ 151 (385)
T PRK07522 136 EEVGCLGVPSMIARLP 151 (385)
T ss_pred cccCCccHHHHHHHhh
Confidence 3334479999998653
No 19
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=96.57 E-value=0.019 Score=59.87 Aligned_cols=100 Identities=13% Similarity=0.134 Sum_probs=71.4
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeecC
Q 013160 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~~ 173 (448)
...+||.++|+++|+++..+. ..|+++.++.. +.+...++|..|+|..
T Consensus 38 ~~a~~l~~~l~~~g~~~~~~~-------------------------------~~nl~a~~~g~-~~~~~~l~l~gH~DtV 85 (413)
T PRK09290 38 QARDLFAEWMEAAGLTVRVDA-------------------------------VGNLFGRLEGR-DPDAPAVLTGSHLDTV 85 (413)
T ss_pred HHHHHHHHHHHHcCCEEEEcC-------------------------------CCcEEEEecCC-CCCCCEEEEecCccCC
Confidence 457999999999999875321 13899999642 1123579999999985
Q ss_pred C--CCccccchHHHHHHHHHHhccCCc-cccceEEEeeCCCCC-----CchhHHHHHHhh
Q 013160 174 K--GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYG-----EYAPVAAWLRDY 225 (448)
Q Consensus 174 ~--~~~~~a~gval~LaLa~yl~r~~~-wAKDIIfv~~D~~~g-----~~~G~~AWL~aY 225 (448)
. +..+...|+|.+++.++.+++..+ +.+||+|+++-+++. +..|.+++++.|
T Consensus 86 p~~g~~d~k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~ 145 (413)
T PRK09290 86 PNGGRFDGPLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGAL 145 (413)
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHccc
Confidence 3 223446799999988888887654 578999999743433 356888887654
No 20
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=96.57 E-value=0.022 Score=58.23 Aligned_cols=109 Identities=11% Similarity=0.077 Sum_probs=71.9
Q ss_pred cchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeec
Q 013160 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (448)
Q Consensus 93 ~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~ 172 (448)
.+.++||.++|+++|+++........ .. ...+ |+++..+. ..+...|+|.+++|.
T Consensus 21 ~~~a~~l~~~l~~~G~~~~~~~~~~~------------------~~----~~~~-~~~~~~~g--~~~~~~ill~~H~Dt 75 (375)
T TIGR01910 21 ETIANYIKDLLREFGFSTDVIEITDD------------------RL----KVLG-KVVVKEPG--NGNEKSLIFNGHYDV 75 (375)
T ss_pred HHHHHHHHHHHHHCCCceEEEecCch------------------hc----cccc-ceEEeccC--CCCCCEEEEeccccc
Confidence 35789999999999999865432100 00 0112 44544442 123467999998876
Q ss_pred CC------------------------CCccccchHHHHHHHHHHhccCC-ccccceEEEeeCCCCCCchhHHHHHHhhc
Q 013160 173 VK------------------------GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (448)
Q Consensus 173 ~~------------------------~~~~~a~gval~LaLa~yl~r~~-~wAKDIIfv~~D~~~g~~~G~~AWL~aYH 226 (448)
.. |..++..+++.+++.++.+++.. -+.+||.|+|+-.++.+..|+++++++.+
T Consensus 76 Vp~~~~~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~ 154 (375)
T TIGR01910 76 VPAGDLELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGY 154 (375)
T ss_pred ccCCChhhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCC
Confidence 42 12344568888888888887764 37789999997555545679999998743
No 21
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=96.55 E-value=0.027 Score=58.43 Aligned_cols=101 Identities=14% Similarity=0.138 Sum_probs=71.5
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeecC
Q 013160 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~~ 173 (448)
...+||.++|+++|+++.... ..|+++.++... .+...++|..|+|..
T Consensus 41 ~~~~~l~~~l~~~G~~~~~~~-------------------------------~~n~~a~~~g~~-~~~~~l~l~~H~DtV 88 (412)
T PRK12893 41 EARDLLAQWMEEAGLTVSVDA-------------------------------IGNLFGRRAGTD-PDAPPVLIGSHLDTQ 88 (412)
T ss_pred HHHHHHHHHHHHcCCEEEEcC-------------------------------CCcEEEEeCCCC-CCCCEEEEEecccCC
Confidence 347999999999999875321 128999996521 123579999999885
Q ss_pred C--CCccccchHHHHHHHHHHhccCCc-cccceEEEeeCCCCCC-----chhHHHHHHhhc
Q 013160 174 K--GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYGE-----YAPVAAWLRDYH 226 (448)
Q Consensus 174 ~--~~~~~a~gval~LaLa~yl~r~~~-wAKDIIfv~~D~~~g~-----~~G~~AWL~aYH 226 (448)
- +..+...|++.+|..++.|++... +.+||+|+++-+++.. ..|.+.+.+.+.
T Consensus 89 p~~g~~dgk~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~ 149 (412)
T PRK12893 89 PTGGRFDGALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALP 149 (412)
T ss_pred CCCCcccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcCC
Confidence 2 223445789999999999988764 6789999997434332 457877775543
No 22
>PRK07473 carboxypeptidase; Provisional
Probab=96.52 E-value=0.037 Score=57.24 Aligned_cols=126 Identities=14% Similarity=0.095 Sum_probs=80.5
Q ss_pred HHHHHHHHhhhhcCCCCCc--cchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEE
Q 013160 74 ANKLIKELNNLHSNPLGAT--TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVG 151 (448)
Q Consensus 74 a~~y~~~l~~l~~~~~~~~--~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~Nvyg 151 (448)
..++.++|-+..+.+.+.. ....+||.++|+++|+++..+... ...+.|+++
T Consensus 13 ~~~~l~~Lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~--------------------------~~~~~~~~~ 66 (376)
T PRK07473 13 MLAGLRPWVECESPTWDAAAVNRMLDLAARDMAIMGATIERIPGR--------------------------QGFGDCVRA 66 (376)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEecCC--------------------------CCCCCeEEE
Confidence 3455555655554443221 134579999999999998654310 112458888
Q ss_pred EEcCCCCCCceeEEEEEEeecCC--------------------CCccccchHHHHHHHHHHhccCCc-cccceEEEeeCC
Q 013160 152 IIRAPRGDGKEAIVLVTPYNAVK--------------------GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADS 210 (448)
Q Consensus 152 IlRAPRgdGtEAIVLvap~~~~~--------------------~~~~~a~gval~LaLa~yl~r~~~-wAKDIIfv~~D~ 210 (448)
.++.+.. +.-.++|..|+|... |..+..++++.++..++.+++... ...+|.|+|+-+
T Consensus 67 ~~~~~~~-~~~~lll~gH~DtV~~~~~~~~~p~~~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~d 145 (376)
T PRK07473 67 RFPHPRQ-GEPGILIAGHMDTVHPVGTLEKLPWRREGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPD 145 (376)
T ss_pred EeCCCCC-CCCeEEEEecCCCCCCCCCccCCCeEEECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCC
Confidence 8865322 234699999888431 112335688888888888877643 345899999744
Q ss_pred CCCCchhHHHHHHhhc
Q 013160 211 QYGEYAPVAAWLRDYH 226 (448)
Q Consensus 211 ~~g~~~G~~AWL~aYH 226 (448)
++.+..|++++++++.
T Consensus 146 EE~g~~g~~~~~~~~~ 161 (376)
T PRK07473 146 EEVGTPSTRDLIEAEA 161 (376)
T ss_pred cccCCccHHHHHHHhh
Confidence 4445679999999764
No 23
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=96.44 E-value=0.018 Score=59.71 Aligned_cols=99 Identities=13% Similarity=0.127 Sum_probs=71.9
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeecC
Q 013160 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~~ 173 (448)
..++||.++|+++|+++.... . .|+++.++..+ ++ -.+++..|.|..
T Consensus 40 ~~~~~l~~~l~~~G~~~~~~~------------------------------~-~nl~a~~~g~~-~~-~~l~l~gH~DtV 86 (412)
T PRK12892 40 AARRRLAAWCEAAGLAVRIDG------------------------------I-GNVFGRLPGPG-PG-PALLVGSHLDSQ 86 (412)
T ss_pred HHHHHHHHHHHHcCCEEEEcC------------------------------C-CcEEEEecCCC-CC-CeEEEEccccCC
Confidence 467999999999999875321 1 29999997532 22 479999999985
Q ss_pred C--CCccccchHHHHHHHHHHhccCC-ccccceEEEee-CCCCC----CchhHHHHHHhh
Q 013160 174 K--GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVA-DSQYG----EYAPVAAWLRDY 225 (448)
Q Consensus 174 ~--~~~~~a~gval~LaLa~yl~r~~-~wAKDIIfv~~-D~~~g----~~~G~~AWL~aY 225 (448)
. +-.+...|++.++..++.+++.. -+.+||+|+++ |.+.+ +..|.+++++.+
T Consensus 87 p~~g~~dg~~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~ 146 (412)
T PRK12892 87 NLGGRYDGALGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRL 146 (412)
T ss_pred CCCCcccchHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCC
Confidence 2 22233568999999999998764 46789999996 54432 457999999644
No 24
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=96.40 E-value=0.025 Score=59.07 Aligned_cols=96 Identities=9% Similarity=0.103 Sum_probs=70.1
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeecC
Q 013160 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~~ 173 (448)
..++||.++|++.|+++.... .| |+++.+... +.+...+++..|+|..
T Consensus 41 ~~~~~l~~~l~~~G~~v~~~~------------------------------~g-Nl~a~~~g~-~~~~~~l~~~~H~DtV 88 (414)
T PRK12891 41 EARDLFVAWARDAGCTVRVDA------------------------------MG-NLFARRAGR-DPDAAPVMTGSHADSQ 88 (414)
T ss_pred HHHHHHHHHHHHCCCEEEECC------------------------------CC-CEEEEecCC-CCCCCeEEEEecccCC
Confidence 478999999999999886421 12 899998652 2234689999999885
Q ss_pred C--CCccccchHHHHHHHHHHhccCC-ccccceEEEeeCCCCCC-----chhHHHH
Q 013160 174 K--GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGE-----YAPVAAW 221 (448)
Q Consensus 174 ~--~~~~~a~gval~LaLa~yl~r~~-~wAKDIIfv~~D~~~g~-----~~G~~AW 221 (448)
- +..+...|++.++..++.|++.. -+.+||.|+++-++++. ..|.++|
T Consensus 89 p~gg~~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~ 144 (414)
T PRK12891 89 PTGGRYDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVF 144 (414)
T ss_pred CCCccccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHH
Confidence 3 33455789999999999998764 36789999997444432 3577655
No 25
>PRK06446 hypothetical protein; Provisional
Probab=96.39 E-value=0.046 Score=57.54 Aligned_cols=122 Identities=13% Similarity=0.102 Sum_probs=78.6
Q ss_pred HHHHHHHHhhhhcCCCCCc--cchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEE
Q 013160 74 ANKLIKELNNLHSNPLGAT--TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVG 151 (448)
Q Consensus 74 a~~y~~~l~~l~~~~~~~~--~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~Nvyg 151 (448)
+..+.++|-+..+.+.... ....+||.++|+++|+++..++. ..+.|+++
T Consensus 4 ~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~----------------------------~~~~~lia 55 (436)
T PRK06446 4 ELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERT----------------------------KGHPVVYG 55 (436)
T ss_pred HHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEec----------------------------CCCCEEEE
Confidence 3445556655555442211 35789999999999998865431 01368888
Q ss_pred EEcCCCCCCceeEEEEEEeecCC------------------------CCccccchHHHHHHHHHHhccCCccccceEEEe
Q 013160 152 IIRAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLV 207 (448)
Q Consensus 152 IlRAPRgdGtEAIVLvap~~~~~------------------------~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv~ 207 (448)
.+..+ +.-.++|..|+|..- |..|..++++.++..++.+.+..-...+|.|+|
T Consensus 56 ~~~~~---~~~~vll~gH~DvVp~~~~~~W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~~~~~~i~~~~ 132 (436)
T PRK06446 56 EINVG---AKKTLLIYNHYDVQPVDPLSEWKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKHKLNVNVKFLY 132 (436)
T ss_pred EecCC---CCCEEEEEecccCCCCCccccccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 87532 234799988887621 123345778887766666654444678999999
Q ss_pred eCCCCCCchhHHHHHHhhc
Q 013160 208 ADSQYGEYAPVAAWLRDYH 226 (448)
Q Consensus 208 ~D~~~g~~~G~~AWL~aYH 226 (448)
+-+++.+..|++++++++.
T Consensus 133 ~~dEE~g~~g~~~~l~~~~ 151 (436)
T PRK06446 133 EGEEEIGSPNLEDFIEKNK 151 (436)
T ss_pred EcccccCCHhHHHHHHHHH
Confidence 6333434579999998854
No 26
>PRK07907 hypothetical protein; Provisional
Probab=96.38 E-value=0.057 Score=56.96 Aligned_cols=121 Identities=13% Similarity=0.128 Sum_probs=78.2
Q ss_pred HHHHHHHHHhhhhcCCCC-----CccchHHHHHHHHHhcCC-ceeeeecccCCcccCCCccccCCCCCccccCCcccccc
Q 013160 73 EANKLIKELNNLHSNPLG-----ATTESHGIIAKYMSNLGA-QVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYG 146 (448)
Q Consensus 73 ~a~~y~~~l~~l~~~~~~-----~~~~~~~~l~~~l~~lGL-ev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G 146 (448)
.+.++.++|-+..+.+.+ ......+||.++|+++|+ ++..+. . ...
T Consensus 19 ~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~--------------------------~~~ 70 (449)
T PRK07907 19 RVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVS--A--------------------------DGA 70 (449)
T ss_pred HHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEe--c--------------------------CCC
Confidence 344555555555543321 123568999999999997 665443 0 012
Q ss_pred ceEEEEEcCCCCCCceeEEEEEEeecCC------------------------CCccccchHHHHHHHHHHhccCCccccc
Q 013160 147 INTVGIIRAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVTWLAKD 202 (448)
Q Consensus 147 ~NvygIlRAPRgdGtEAIVLvap~~~~~------------------------~~~~~a~gval~LaLa~yl~r~~~wAKD 202 (448)
.|+++.+++ +.+...+++..|+|..- |..+..++++.++..++.+ ... ...+
T Consensus 71 ~nl~a~~~~--~~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l-~~~-~~~~ 146 (449)
T PRK07907 71 PAVIGTRPA--PPGAPTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL-GGD-LPVG 146 (449)
T ss_pred CEEEEEecC--CCCCCEEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh-ccC-CCCc
Confidence 588998864 23456799988776431 2234457788888877877 333 3578
Q ss_pred eEEEeeCCCCCCchhHHHHHHhh
Q 013160 203 IIWLVADSQYGEYAPVAAWLRDY 225 (448)
Q Consensus 203 IIfv~~D~~~g~~~G~~AWL~aY 225 (448)
|.|+++..++.+..|++++++++
T Consensus 147 i~~~~~~dEE~g~~g~~~~l~~~ 169 (449)
T PRK07907 147 VTVFVEGEEEMGSPSLERLLAEH 169 (449)
T ss_pred EEEEEEcCcccCCccHHHHHHhc
Confidence 99999654544457999999986
No 27
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=96.35 E-value=0.055 Score=55.11 Aligned_cols=119 Identities=12% Similarity=0.009 Sum_probs=74.2
Q ss_pred HHHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEE
Q 013160 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (448)
Q Consensus 74 a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIl 153 (448)
+.++.++|-+..+.+..+ ....+||.++|+++|+++..+.. ....|+++.+
T Consensus 4 ~~~~l~~Lv~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~~~----------------------------~~~~n~~~~~ 54 (375)
T PRK13009 4 VLELAQDLIRRPSVTPDD-AGCQDLLAERLEALGFTCERMDF----------------------------GDVKNLWARR 54 (375)
T ss_pred HHHHHHHHhCCCCCCCch-hhHHHHHHHHHHHcCCeEEEecc----------------------------CCCcEEEEEe
Confidence 345556665555443332 35789999999999998754431 0124888875
Q ss_pred cCCCCCCceeEEEEEEeecCCC------------------------CccccchHHHHHHHHHHhcc-CCccccceEEEee
Q 013160 154 RAPRGDGKEAIVLVTPYNAVKG------------------------GVRETLSLGIAYSVFSLLTR-VTWLAKDIIWLVA 208 (448)
Q Consensus 154 RAPRgdGtEAIVLvap~~~~~~------------------------~~~~a~gval~LaLa~yl~r-~~~wAKDIIfv~~ 208 (448)
+ .+...|++..++|.... ..|+-.+++.++..++.+++ ..-+.++|.|+++
T Consensus 55 -g---~~~~~i~l~~H~D~Vp~g~~~~w~~~Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~ 130 (375)
T PRK13009 55 -G---TEGPHLCFAGHTDVVPPGDLEAWTSPPFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLIT 130 (375)
T ss_pred -c---CCCCEEEEEeecccCCCCCcccCCCCCCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEE
Confidence 3 23467999998876421 11333467776665555544 3346689999996
Q ss_pred CCCC-CCchhHHHHHHhh
Q 013160 209 DSQY-GEYAPVAAWLRDY 225 (448)
Q Consensus 209 D~~~-g~~~G~~AWL~aY 225 (448)
-+++ ++..|++.+++.+
T Consensus 131 ~~EE~~~~~G~~~~~~~~ 148 (375)
T PRK13009 131 SDEEGPAINGTVKVLEWL 148 (375)
T ss_pred eecccccccCHHHHHHHH
Confidence 4333 3345888888765
No 28
>PRK08262 hypothetical protein; Provisional
Probab=96.34 E-value=0.058 Score=57.53 Aligned_cols=138 Identities=13% Similarity=0.068 Sum_probs=83.6
Q ss_pred eeeccCCCCcceeeecCchhHHHHHHHHHHHhhhhcCCCCCc--------cchHHHHHHHHHhcCCceeeeecccCCccc
Q 013160 51 YISENALMPGSASSMLSNQEVSEANKLIKELNNLHSNPLGAT--------TESHGIIAKYMSNLGAQVNNHKFHPQLNQF 122 (448)
Q Consensus 51 YISENALlPG~v~s~f~~~d~~~a~~y~~~l~~l~~~~~~~~--------~~~~~~l~~~l~~lGLev~~q~f~~~~~~f 122 (448)
-||--|.-| .-.+.+ .+..+.+++-+..+.+.... ....+||.++|+++|+++..+.
T Consensus 30 ~~~~~~~~~----~~~~~~---~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~-------- 94 (486)
T PRK08262 30 QIDVPAVAP----VAVDED---AAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREV-------- 94 (486)
T ss_pred CCCccccCC----CcCCHH---HHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEE--------
Confidence 355555544 333333 34556666666655443221 1257888888888888765443
Q ss_pred CCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeecCC--------------------------CC
Q 013160 123 HPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVK--------------------------GG 176 (448)
Q Consensus 123 ~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~~~--------------------------~~ 176 (448)
..|.|+++.++.+ +.+...|++.+++|..- |.
T Consensus 95 ---------------------~~~~~vv~~~~g~-~~~~~~ill~gH~DvVp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~ 152 (486)
T PRK08262 95 ---------------------VGGHSLLYTWKGS-DPSLKPIVLMAHQDVVPVAPGTEGDWTHPPFSGVIADGYVWGRGA 152 (486)
T ss_pred ---------------------ECCccEEEEEECC-CCCCCeEEEECcccccCCCCCCcccCccCCCceEeeCCEEEecCc
Confidence 1235777777543 12336788888776431 22
Q ss_pred ccccchHHHHHHHHHHhccCC-ccccceEEEeeCCCCCCchhHHHHHHhh
Q 013160 177 VRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRDY 225 (448)
Q Consensus 177 ~~~a~gval~LaLa~yl~r~~-~wAKDIIfv~~D~~~g~~~G~~AWL~aY 225 (448)
.++.++++.++..++++++.. -+-++|.|+|.=+++.+..|++++++.+
T Consensus 153 ~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~~~l 202 (486)
T PRK08262 153 LDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARAIAELL 202 (486)
T ss_pred cccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHHHHHHH
Confidence 234578888888888887765 4668999999643443345888887653
No 29
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=96.33 E-value=0.027 Score=58.99 Aligned_cols=97 Identities=13% Similarity=0.082 Sum_probs=74.3
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeecC
Q 013160 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~~ 173 (448)
..++|+.+||+++|+++..- .. -|++|.+.+.. .+..+|++..|.|+.
T Consensus 34 ~a~~~~~~~~~~~Gl~v~~D------------------------------~~-gN~~~~~~g~~-~~~~~i~~gsHlDtv 81 (406)
T TIGR03176 34 AAQQQFKKRMAESGLETRFD------------------------------DV-GNLYGRLVGTE-FPEETILTGSHIDTV 81 (406)
T ss_pred HHHHHHHHHHHHcCCEEEEc------------------------------CC-CcEEEEecCCC-CCCCeEEEeccccCC
Confidence 46799999999999987521 11 39999998743 356799999999986
Q ss_pred C--CCccccchHHHHHHHHHHhccC-CccccceEEEeeCCCCCC-----chhHHHHH
Q 013160 174 K--GGVRETLSLGIAYSVFSLLTRV-TWLAKDIIWLVADSQYGE-----YAPVAAWL 222 (448)
Q Consensus 174 ~--~~~~~a~gval~LaLa~yl~r~-~~wAKDIIfv~~D~~~g~-----~~G~~AWL 222 (448)
. |..++..||..+|..++.+++. .-.-++|-++++=.+++. ..|.++|.
T Consensus 82 ~~gG~~dg~~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~ 138 (406)
T TIGR03176 82 VNGGNLDGQFGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIF 138 (406)
T ss_pred CCCCccCchhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHh
Confidence 3 3456688999999999999987 455688988886444443 78888886
No 30
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=96.32 E-value=0.063 Score=52.91 Aligned_cols=123 Identities=10% Similarity=0.096 Sum_probs=78.6
Q ss_pred EEEEEEeecC-------CCCccccchHHHHHHHHHHhccC----CccccceEEEeeCCCCCCchhHHHHHHhhcCCCCCC
Q 013160 164 IVLVTPYNAV-------KGGVRETLSLGIAYSVFSLLTRV----TWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSN 232 (448)
Q Consensus 164 IVLvap~~~~-------~~~~~~a~gval~LaLa~yl~r~----~~wAKDIIfv~~D~~~g~~~G~~AWL~aYH~~~~~~ 232 (448)
|++++++|+. -|++....|+..+||.|+.|++. .-+.|+|+|+|+++|-=++.|.+.|+.+-....+..
T Consensus 3 Ilv~armDs~s~F~~~s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiGS~R~vyDm~~~~f~~ 82 (234)
T PF05450_consen 3 ILVVARMDSFSFFHDLSPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIGSSRFVYDMQNGNFPS 82 (234)
T ss_pred EEEEecccchhcccCCCCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccchHHHHHHHHcCcCcc
Confidence 5667777763 24455578999999999999876 347899999999988667899999999998765431
Q ss_pred CCCCcccccccCCCCccccccccccchhhhheeeEEeecCCCCCc-ceEEEEEeecCCCCCChhHHHHHHHHHh
Q 013160 233 LDSLNTETCHVGNNNFESKISYGIRRSGTMAAALVLGVAYGNENE-DTLGIYAEASNGQMPNLDLINIVHYLAV 305 (448)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~RaGsIqAAlvLe~~~~~~~~-d~l~I~~EG~NGqLPNLDLiN~v~~la~ 305 (448)
... . ... .+-..|...| |+..-+... ..+-+...+.+..--...+.+.+..++.
T Consensus 83 ~~~-----~-----------~~~-i~~~~I~~~I--Elgqvg~~~~~~l~~Hvd~~~~~~~~~~~~~~l~~~~~ 137 (234)
T PF05450_consen 83 DSL-----Q-----------FQP-ISLDNIDSVI--ELGQVGLSNSSGLYAHVDSPSNSSVANQVDEALDAAAK 137 (234)
T ss_pred ccc-----c-----------ccc-ccHHHCCEEE--EeeccCCCCCCCEEEEecCCccchhhHHHHHHHHHHHH
Confidence 000 0 000 1334566654 666555422 2466665565555544445555555443
No 31
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=96.29 E-value=0.037 Score=59.09 Aligned_cols=117 Identities=13% Similarity=0.145 Sum_probs=76.4
Q ss_pred HHHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEE
Q 013160 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (448)
Q Consensus 74 a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIl 153 (448)
+.++.++|-+..+.+ ......++||.++|+++|+++.... .-|+++.+
T Consensus 6 ~~~~l~~l~~i~s~s-~~e~~~~~~l~~~l~~~G~~~~~~~-------------------------------~~n~~~~~ 53 (477)
T TIGR01893 6 VFKYFEEISKIPRPS-KNEKEVSNFIVNWAKKLGLEVKQDE-------------------------------VGNVLIRK 53 (477)
T ss_pred HHHHHHHHHcCCCCC-ccHHHHHHHHHHHHHHcCCeEEEeC-------------------------------CCeEEEEE
Confidence 344555665554332 3334688999999999999865321 13899998
Q ss_pred cCCCC-CCceeEEEEEEeecCCCC------------------------------ccccchHHHHHHHHHHhccCCccccc
Q 013160 154 RAPRG-DGKEAIVLVTPYNAVKGG------------------------------VRETLSLGIAYSVFSLLTRVTWLAKD 202 (448)
Q Consensus 154 RAPRg-dGtEAIVLvap~~~~~~~------------------------------~~~a~gval~LaLa~yl~r~~~wAKD 202 (448)
.+..+ .+...++|..|.|....+ .+...|++.++++++. ....-++
T Consensus 54 ~~~~g~~~~~~l~l~~HlDtV~~~~~~~~~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~~~~~~ 130 (477)
T TIGR01893 54 PATPGYENHPPIVLQGHMDMVCEKNEDSLHDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NNLKHPP 130 (477)
T ss_pred cCCCCCCCCCeEEEEeeccccCCCCCCCCCCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CCCCCCC
Confidence 77544 234679999988753211 1446778877777654 2334569
Q ss_pred eEEEeeCCCCCCchhHHHHHHhh
Q 013160 203 IIWLVADSQYGEYAPVAAWLRDY 225 (448)
Q Consensus 203 IIfv~~D~~~g~~~G~~AWL~aY 225 (448)
|.++|+-+++.+..|++++..+.
T Consensus 131 i~~~~~~dEE~g~~Gs~~l~~~~ 153 (477)
T TIGR01893 131 LELLFTVDEETGMDGALGLDENW 153 (477)
T ss_pred EEEEEEeccccCchhhhhcChhh
Confidence 99999744445567899987654
No 32
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=96.26 E-value=0.022 Score=59.51 Aligned_cols=83 Identities=11% Similarity=0.091 Sum_probs=62.4
Q ss_pred cccceEEEEEcCCCCCCceeEEEEE----------Eeec---CCCCccccchHHHHHHHHHHhccCCccccceEEEeeCC
Q 013160 144 LYGINTVGIIRAPRGDGKEAIVLVT----------PYNA---VKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADS 210 (448)
Q Consensus 144 ~~G~NvygIlRAPRgdGtEAIVLva----------p~~~---~~~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~ 210 (448)
....|+.+...+. .-..++++..+ ++++ ..|..+|+.|+|.+|.+||+|++.+.- ++|.|++++.
T Consensus 182 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~GA~DNasGva~llEiAr~l~~~~p~-~~v~f~~~~a 259 (435)
T COG2234 182 LTSKNVAATISGS-SQIIEAIIGTAHSDSLGLLGAHIDSVPTGPGADDNASGVAALLELARVLKGNPPK-RTVRFVAFGA 259 (435)
T ss_pred eEEEEEeeeeecc-cccceEEEeccCCCceeeecccccCCcCCCCcccccHHHHHHHHHHHHHhcCCCC-ceEEEEEecc
Confidence 4556666666665 33444444444 4443 136788899999999999999999943 7999999999
Q ss_pred CCCCchhHHHHHHhhcCC
Q 013160 211 QYGEYAPVAAWLRDYHTP 228 (448)
Q Consensus 211 ~~g~~~G~~AWL~aYH~~ 228 (448)
++.+..|.++++..+...
T Consensus 260 EE~Gl~GS~~~~~~~~~~ 277 (435)
T COG2234 260 EESGLLGSEAYVKRLSKD 277 (435)
T ss_pred hhhcccccHHHHhcCCcc
Confidence 888889999999988753
No 33
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=96.16 E-value=0.11 Score=54.00 Aligned_cols=131 Identities=15% Similarity=0.095 Sum_probs=78.2
Q ss_pred HHHHHHHHHHhhhhcCC--CCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceE
Q 013160 72 SEANKLIKELNNLHSNP--LGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINT 149 (448)
Q Consensus 72 ~~a~~y~~~l~~l~~~~--~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~Nv 149 (448)
.++.++.++|-+..+.+ ..+..+..+||.++|+++|+++..+..... | ...+ ...+.|+
T Consensus 14 ~~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~-----~-----------~~~~---~~~~~nl 74 (427)
T PRK13013 14 DDLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGA-----P-----------GDSE---TYPRWNL 74 (427)
T ss_pred HHHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCC-----C-----------cccc---cCCcceE
Confidence 34455566665554432 111135789999999999999876542110 0 0000 1235799
Q ss_pred EEEEcCCCCCCceeEEEEEEeecCC----------------------CCccccchHHHHHHHHHHhccCCc-cccceEEE
Q 013160 150 VGIIRAPRGDGKEAIVLVTPYNAVK----------------------GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWL 206 (448)
Q Consensus 150 ygIlRAPRgdGtEAIVLvap~~~~~----------------------~~~~~a~gval~LaLa~yl~r~~~-wAKDIIfv 206 (448)
+|.++.. .+...|+|.+++|..- |..+.-++++.+|..++.+++..+ +.+||+|+
T Consensus 75 ia~~~g~--~~~~~i~l~gH~DvVp~~~~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~ 152 (427)
T PRK13013 75 VARRQGA--RDGDCVHFNSHHDVVEVGHGWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEIS 152 (427)
T ss_pred EEEecCC--CCCCEEEEEeccccCCCCCCCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEE
Confidence 9998642 2335799999887531 122334678888888899987653 46899999
Q ss_pred ee-CCCCCCchhHHHHHH
Q 013160 207 VA-DSQYGEYAPVAAWLR 223 (448)
Q Consensus 207 ~~-D~~~g~~~G~~AWL~ 223 (448)
|+ |.+.+...|.+..++
T Consensus 153 ~~~dEE~g~~~g~~~l~~ 170 (427)
T PRK13013 153 GTADEESGGFGGVAYLAE 170 (427)
T ss_pred EEeccccCChhHHHHHHh
Confidence 96 543333334444443
No 34
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=96.15 E-value=0.096 Score=53.65 Aligned_cols=130 Identities=13% Similarity=0.099 Sum_probs=80.6
Q ss_pred HHHHHHHHHhhhhcCCCC----CccchHHHHHHHHHhcCCc-eeeeecccCCcccCCCccccCCCCCccccCCccccccc
Q 013160 73 EANKLIKELNNLHSNPLG----ATTESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGI 147 (448)
Q Consensus 73 ~a~~y~~~l~~l~~~~~~----~~~~~~~~l~~~l~~lGLe-v~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~ 147 (448)
.+.+++++|-+..+.+.+ +.....+||.++|+++|++ +..+...+. + +. ...+.
T Consensus 6 ~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~---------------~----~~--~~~~~ 64 (400)
T PRK13983 6 EMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDP---------------R----VI--EGVRP 64 (400)
T ss_pred HHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCc---------------c----cc--cCCCc
Confidence 345566666655543311 1224679999999999998 655432110 0 00 01147
Q ss_pred eEEEEEcCCCCCCceeEEEEEEeecCCC------------------------CccccchHHHHHHHHHHhccCC-ccccc
Q 013160 148 NTVGIIRAPRGDGKEAIVLVTPYNAVKG------------------------GVRETLSLGIAYSVFSLLTRVT-WLAKD 202 (448)
Q Consensus 148 NvygIlRAPRgdGtEAIVLvap~~~~~~------------------------~~~~a~gval~LaLa~yl~r~~-~wAKD 202 (448)
|+++.++.. ++...|+|.+++|..-. ..++..+++.++..++.+.+.. -+-+|
T Consensus 65 nl~~~~~g~--~~~~~lll~~H~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~ 142 (400)
T PRK13983 65 NIVAKIPGG--DGKRTLWIISHMDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYN 142 (400)
T ss_pred cEEEEecCC--CCCCeEEEEeeccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCc
Confidence 999998653 22238999998876421 1233567887777777776644 46689
Q ss_pred eEEEeeCCCC-CCchhHHHHHHhh
Q 013160 203 IIWLVADSQY-GEYAPVAAWLRDY 225 (448)
Q Consensus 203 IIfv~~D~~~-g~~~G~~AWL~aY 225 (448)
|.|+|.-+++ +...|++..++++
T Consensus 143 v~~~~~~dEE~g~~~g~~~~~~~~ 166 (400)
T PRK13983 143 LGLAFVSDEETGSKYGIQYLLKKH 166 (400)
T ss_pred EEEEEEeccccCCcccHHHHHhhc
Confidence 9999974444 4445889988874
No 35
>PRK13381 peptidase T; Provisional
Probab=96.15 E-value=0.053 Score=56.30 Aligned_cols=100 Identities=13% Similarity=0.084 Sum_probs=68.0
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeecC
Q 013160 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~~ 173 (448)
+.++||.++|+++|+++.... .--||+|.+++. +++...|+|.+|+|..
T Consensus 32 ~~~~~l~~~l~~~G~~~~~~~------------------------------~~~nvi~~~~g~-~~~~~~lll~~H~D~V 80 (404)
T PRK13381 32 ELAKLLADELRELGLEDIVID------------------------------EHAIVTAKLPGN-TPGAPRIGFIAHLDTV 80 (404)
T ss_pred HHHHHHHHHHHHcCCCcEEEc------------------------------CCeEEEEEEecC-CCCCCeEEEEEEecCC
Confidence 578999999999999643210 012999998642 2233689999988764
Q ss_pred C-------------------------------------------------CC----ccccchHHHHHHHHHHhccCCccc
Q 013160 174 K-------------------------------------------------GG----VRETLSLGIAYSVFSLLTRVTWLA 200 (448)
Q Consensus 174 ~-------------------------------------------------~~----~~~a~gval~LaLa~yl~r~~~wA 200 (448)
- |. .+...|++.++..++.+++.....
T Consensus 81 p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~~~~ 160 (404)
T PRK13381 81 DVGLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENEVEH 160 (404)
T ss_pred CccCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcCCCC
Confidence 1 11 233456788888888887655445
Q ss_pred cceEEEeeCCCCCCchhHHHHHHh
Q 013160 201 KDIIWLVADSQYGEYAPVAAWLRD 224 (448)
Q Consensus 201 KDIIfv~~D~~~g~~~G~~AWL~a 224 (448)
.||+|+|+-+++.+..|+++++.+
T Consensus 161 g~i~~~~~~dEE~g~~G~~~~~~~ 184 (404)
T PRK13381 161 GDIVVAFVPDEEIGLRGAKALDLA 184 (404)
T ss_pred CCEEEEEEcccccccccHHHHHHh
Confidence 699999974444445799999765
No 36
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=96.14 E-value=0.033 Score=61.46 Aligned_cols=96 Identities=16% Similarity=0.159 Sum_probs=71.5
Q ss_pred chHHHHHHHHHhcCC-ceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeec
Q 013160 94 ESHGIIAKYMSNLGA-QVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (448)
Q Consensus 94 ~~~~~l~~~l~~lGL-ev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~ 172 (448)
..++|+.+||+++|+ ++.... --|++|.+++++ .+..+|++..|.|+
T Consensus 215 ~~~~~l~~~~~~~Gl~~v~~D~-------------------------------~GNl~~~~~g~~-~~~~~v~~gsHlDT 262 (591)
T PRK13590 215 ACAQQISHWMRDCGFDEVHIDA-------------------------------VGNVVGRYKGST-PQAKRLLTGSHYDT 262 (591)
T ss_pred HHHHHHHHHHHHcCCCeeeECC-------------------------------CCCEEEEecCCC-CCCCeEEEeccccc
Confidence 468999999999999 654211 148999988753 34567999999998
Q ss_pred C--CCCccccchHHHHHHHHHHhccCCcc-ccceEEEeeCCCCC-----CchhHHHH
Q 013160 173 V--KGGVRETLSLGIAYSVFSLLTRVTWL-AKDIIWLVADSQYG-----EYAPVAAW 221 (448)
Q Consensus 173 ~--~~~~~~a~gval~LaLa~yl~r~~~w-AKDIIfv~~D~~~g-----~~~G~~AW 221 (448)
. .|..+...||+.+|..++.|++...- .++|.|+++=.+++ ...|.++|
T Consensus 263 V~~gG~~DG~~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~ 319 (591)
T PRK13590 263 VRNGGKYDGRLGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGAL 319 (591)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHH
Confidence 5 34466678999999999999987643 56999998644443 35677764
No 37
>PRK07338 hypothetical protein; Provisional
Probab=96.11 E-value=0.12 Score=53.51 Aligned_cols=117 Identities=9% Similarity=0.043 Sum_probs=72.7
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeecC
Q 013160 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~~ 173 (448)
+..+||.++|+++|+++..+..... +..+.+ .. .. ....|.|+++.++. ++...++|..|+|..
T Consensus 41 ~~~~~l~~~l~~~G~~~~~~~~~~~-------~~~~~~-~~---~~--~~~~~~nl~a~~~~---~~~~~lll~gH~DvV 104 (402)
T PRK07338 41 RMAELLADAFAALPGEIELIPLPPV-------EVIDAD-GR---TL--EQAHGPALHVSVRP---EAPRQVLLTGHMDTV 104 (402)
T ss_pred HHHHHHHHHHHhCCCcEEEecCCcc-------cccccc-cc---cc--ccCcCCeEEEEECC---CCCccEEEEeecCcc
Confidence 4678999999999999865442110 000000 00 00 01245799999843 222359999988753
Q ss_pred CC--------------------CccccchHHHHHHHHHHhccCCc-cccceEEEeeCCCCCCchhHHHHHHhhc
Q 013160 174 KG--------------------GVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (448)
Q Consensus 174 ~~--------------------~~~~a~gval~LaLa~yl~r~~~-wAKDIIfv~~D~~~g~~~G~~AWL~aYH 226 (448)
-. ..+..++++.+++.++.|++... ...+|.|+|+-+++.+..|.+.++++..
T Consensus 105 p~~~~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~~~~~~ 178 (402)
T PRK07338 105 FPADHPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVLINPDEEIGSPASAPLLAELA 178 (402)
T ss_pred CCCCCcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEECCcccCChhhHHHHHHHh
Confidence 11 12234578888888888876543 4569999997444444568899998864
No 38
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=95.98 E-value=0.044 Score=60.54 Aligned_cols=97 Identities=18% Similarity=0.194 Sum_probs=73.4
Q ss_pred chHHHHHHHHHhcCCc-eeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeec
Q 013160 94 ESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLe-v~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~ 172 (448)
..++|+.+||+++|++ +.... --||+|.++++. .+..++++..|.|+
T Consensus 215 ~~~~~~~~~~~~~Gl~~v~~D~-------------------------------~gNv~~~~~g~~-~~~p~v~~gSHlDT 262 (591)
T PRK13799 215 ACANQISDWMRDAGFDEVEIDA-------------------------------VGNVVGRYKAAD-DDAKTLITGSHYDT 262 (591)
T ss_pred HHHHHHHHHHHHcCCCeEeECC-------------------------------CCCEEEEcCCCC-CCCCeEEEeccccc
Confidence 4689999999999997 75321 148999987642 23468999999998
Q ss_pred C--CCCccccchHHHHHHHHHHhccCCc-cccceEEEeeCCCCC-----CchhHHHHH
Q 013160 173 V--KGGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYG-----EYAPVAAWL 222 (448)
Q Consensus 173 ~--~~~~~~a~gval~LaLa~yl~r~~~-wAKDIIfv~~D~~~g-----~~~G~~AWL 222 (448)
. .|..+...||+.+|..++.|+.... ..++|.++..=.+++ ...|.++|.
T Consensus 263 V~~gG~~DG~~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~ 320 (591)
T PRK13799 263 VRNGGKYDGREGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALI 320 (591)
T ss_pred cCCCCccccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHh
Confidence 5 3456667899999999999988755 457999998633444 567888886
No 39
>PRK06915 acetylornithine deacetylase; Validated
Probab=95.96 E-value=0.11 Score=54.10 Aligned_cols=139 Identities=19% Similarity=0.175 Sum_probs=79.0
Q ss_pred HHHHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEE
Q 013160 73 EANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (448)
Q Consensus 73 ~a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygI 152 (448)
++.+++++|-+..+-+.++ .+..+||+++|+++|+++..+.........+| .|.. .......+.|++|.
T Consensus 18 ~~~~~l~~lv~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~--~~~~--------~~~~~~~~~nlia~ 86 (422)
T PRK06915 18 EAVKLLKRLIQEKSVSGDE-SGAQAIVIEKLRELGLDLDIWEPSFKKLKDHP--YFVS--------PRTSFSDSPNIVAT 86 (422)
T ss_pred HHHHHHHHHHhCCCCCcch-HHHHHHHHHHHHhcCCeeEEeecchhhhhccc--ccCC--------cccccCCCceEEEE
Confidence 3445566665555444332 35788999999999998866543221000000 0000 00001135899999
Q ss_pred EcCCCCCCceeEEEEEEeecCC------------------------CCccccchHHHHHHHHHHhccCCc-cccceEEEe
Q 013160 153 IRAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLV 207 (448)
Q Consensus 153 lRAPRgdGtEAIVLvap~~~~~------------------------~~~~~a~gval~LaLa~yl~r~~~-wAKDIIfv~ 207 (448)
++.. +.+ ..|++.+++|..- |..|..++++.++..++.+++..+ +..+|+|++
T Consensus 87 ~~g~-~~~-~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v~~~~ 164 (422)
T PRK06915 87 LKGS-GGG-KSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDVIFQS 164 (422)
T ss_pred EcCC-CCC-CeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEE
Confidence 9642 223 4799998876531 112333467777777888887654 457999999
Q ss_pred eCCCCCCchhHHHHHHh
Q 013160 208 ADSQYGEYAPVAAWLRD 224 (448)
Q Consensus 208 ~D~~~g~~~G~~AWL~a 224 (448)
+=+++.+..|..+.+++
T Consensus 165 ~~dEE~g~~G~~~~~~~ 181 (422)
T PRK06915 165 VIEEESGGAGTLAAILR 181 (422)
T ss_pred ecccccCCcchHHHHhc
Confidence 63333233476666553
No 40
>PRK06837 acetylornithine deacetylase; Provisional
Probab=95.94 E-value=0.12 Score=54.13 Aligned_cols=137 Identities=15% Similarity=0.149 Sum_probs=78.6
Q ss_pred HHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEc
Q 013160 75 NKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIR 154 (448)
Q Consensus 75 ~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlR 154 (448)
.++.+++-+..+.+.+. .+.++||.++|+++|+++......+.. ....+..+.. ......+.||++.++
T Consensus 23 ~~~l~~li~ipS~s~~e-~~~~~~l~~~l~~~G~~~~~~~~~~~~-------~~~~~~~~~~---~~~~~~~~nl~a~~~ 91 (427)
T PRK06837 23 VAFTQDLVRFPSTRGAE-APCQDFLARAFRERGYEVDRWSIDPDD-------LKSHPGAGPV---EIDYSGAPNVVGTYR 91 (427)
T ss_pred HHHHHHHhccCCCCCcH-HHHHHHHHHHHHHCCCceEEecCCHHH-------hhhccccccc---ccccCCCceEEEEec
Confidence 34455555555444332 367899999999999998665432110 0000000000 001124689999997
Q ss_pred CCCCCCceeEEEEEEeecCC------------------------CCccccchHHHHHHHHHHhccCCc-cccceEEEeeC
Q 013160 155 APRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVAD 209 (448)
Q Consensus 155 APRgdGtEAIVLvap~~~~~------------------------~~~~~a~gval~LaLa~yl~r~~~-wAKDIIfv~~D 209 (448)
.-..+ .-.|++..++|... |..+..++++.++..++.+++... +..||+|+|+-
T Consensus 92 g~~~~-~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~i~~~~~~ 170 (427)
T PRK06837 92 PAGKT-GRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAARVHFQSVI 170 (427)
T ss_pred CCCCC-CCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEEe
Confidence 42212 24799999887542 223445678888777788887653 56899999963
Q ss_pred CCCCCchhHHHHHH
Q 013160 210 SQYGEYAPVAAWLR 223 (448)
Q Consensus 210 ~~~g~~~G~~AWL~ 223 (448)
.++....|...-+.
T Consensus 171 dEE~~g~g~~~~~~ 184 (427)
T PRK06837 171 EEESTGNGALSTLQ 184 (427)
T ss_pred ccccCCHhHHHHHh
Confidence 34333346555444
No 41
>PRK13004 peptidase; Reviewed
Probab=95.86 E-value=0.15 Score=52.90 Aligned_cols=117 Identities=10% Similarity=0.030 Sum_probs=75.1
Q ss_pred HHHHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEE
Q 013160 73 EANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (448)
Q Consensus 73 ~a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygI 152 (448)
.+.++.++|-+....+..+ .+.++||.++|+++|+++.... ...|+++.
T Consensus 16 ~~~~~l~~lv~ips~s~~e-~~~a~~l~~~l~~~G~~~~~~~------------------------------~~~n~~a~ 64 (399)
T PRK13004 16 DMTRFLRDLIRIPSESGDE-KRVVKRIKEEMEKVGFDKVEID------------------------------PMGNVLGY 64 (399)
T ss_pred HHHHHHHHHhcCCCCCCch-HHHHHHHHHHHHHcCCcEEEEc------------------------------CCCeEEEE
Confidence 3445555555554444333 3578999999999999742110 11378887
Q ss_pred EcCCCCCCceeEEEEEEeecCCC------------------------CccccchHHHHHHHHHHhccCCc-cccceEEEe
Q 013160 153 IRAPRGDGKEAIVLVTPYNAVKG------------------------GVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLV 207 (448)
Q Consensus 153 lRAPRgdGtEAIVLvap~~~~~~------------------------~~~~a~gval~LaLa~yl~r~~~-wAKDIIfv~ 207 (448)
+.. +...|++.+++|.... ..++..+++.+|+.++.+++... +.++|+|++
T Consensus 65 ~~~----~~~~i~~~~H~DtVp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~ 140 (399)
T PRK13004 65 IGH----GKKLIAFDAHIDTVGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTG 140 (399)
T ss_pred ECC----CCcEEEEEeccCccCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEE
Confidence 753 2267999988875421 11334788999999999987653 578999999
Q ss_pred eCCCC-CCchhHHHHHHh
Q 013160 208 ADSQY-GEYAPVAAWLRD 224 (448)
Q Consensus 208 ~D~~~-g~~~G~~AWL~a 224 (448)
+-+++ ++..|.+.++++
T Consensus 141 ~~~EE~~~g~~~~~~~~~ 158 (399)
T PRK13004 141 TVQEEDCDGLCWRYIIEE 158 (399)
T ss_pred EcccccCcchhHHHHHHh
Confidence 63333 333567778775
No 42
>PRK09104 hypothetical protein; Validated
Probab=95.85 E-value=0.12 Score=54.74 Aligned_cols=124 Identities=10% Similarity=0.068 Sum_probs=79.7
Q ss_pred HHHHHHHHhhhhcCCCCC-----ccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccce
Q 013160 74 ANKLIKELNNLHSNPLGA-----TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGIN 148 (448)
Q Consensus 74 a~~y~~~l~~l~~~~~~~-----~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~N 148 (448)
+.++.+++-+..+.+.+. .....+||.++|+++|+++..+.. ....|
T Consensus 19 ~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~----------------------------~~~~~ 70 (464)
T PRK09104 19 SLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGFEASVRDT----------------------------PGHPM 70 (464)
T ss_pred HHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCCeEEEEec----------------------------CCCCE
Confidence 344455554444433221 124579999999999998765431 01358
Q ss_pred EEEEEcCCCCCCceeEEEEEEeecCC-----------------------------CCccccchHHHHHHHHHHhccC-Cc
Q 013160 149 TVGIIRAPRGDGKEAIVLVTPYNAVK-----------------------------GGVRETLSLGIAYSVFSLLTRV-TW 198 (448)
Q Consensus 149 vygIlRAPRgdGtEAIVLvap~~~~~-----------------------------~~~~~a~gval~LaLa~yl~r~-~~ 198 (448)
+++.++..+ .+...++|..|+|... |..++..+++.++..++-|++. ..
T Consensus 71 l~a~~~g~~-~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~ 149 (464)
T PRK09104 71 VVAHHEGPT-GDAPHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGS 149 (464)
T ss_pred EEEEecCCC-CCCCEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCC
Confidence 999886432 2456799988876520 1123345788888888877764 45
Q ss_pred cccceEEEeeCCCCCCchhHHHHHHhhc
Q 013160 199 LAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (448)
Q Consensus 199 wAKDIIfv~~D~~~g~~~G~~AWL~aYH 226 (448)
+..+|+|+|.-.++.+..|+++|+.+..
T Consensus 150 ~~~~i~~~~~~dEE~g~~g~~~~l~~~~ 177 (464)
T PRK09104 150 LPVRVTILFEGEEESGSPSLVPFLEANA 177 (464)
T ss_pred CCCcEEEEEECccccCCccHHHHHHhhH
Confidence 6779999996444444579999998764
No 43
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=95.84 E-value=0.12 Score=52.51 Aligned_cols=115 Identities=18% Similarity=0.209 Sum_probs=75.4
Q ss_pred HHHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEE
Q 013160 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (448)
Q Consensus 74 a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIl 153 (448)
+.++.++|-+..+.+.+. .+..+||.++|+++|+++.... ..|++|.+
T Consensus 8 ~~~~l~~Lv~i~s~s~~e-~~~~~~l~~~l~~~G~~~~~~~-------------------------------~~n~i~~~ 55 (348)
T PRK04443 8 ARELLKGLVEIPSPSGEE-AAAAEFLVEFMESHGREAWVDE-------------------------------AGNARGPA 55 (348)
T ss_pred HHHHHHHHHcCCCCCCCh-HHHHHHHHHHHHHcCCEEEEcC-------------------------------CCcEEEEc
Confidence 445566666665544332 3678999999999999875321 12677664
Q ss_pred cCCCCCCceeEEEEEEeecCC---------------CCccccchHHHHHHHHHHhccCCccccceEEEeeCCCCCCchhH
Q 013160 154 RAPRGDGKEAIVLVTPYNAVK---------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPV 218 (448)
Q Consensus 154 RAPRgdGtEAIVLvap~~~~~---------------~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~~~g~~~G~ 218 (448)
+++...+++..|+|..- |..|..++++.++..++.+ +. -+..||.|+++-+++.+..|.
T Consensus 56 ----~~~~~~l~~~~H~DtVp~~~p~~~~~g~iyGrG~~D~Kg~~aa~l~A~~~l-~~-~~~~~i~~~~~~dEE~g~~~~ 129 (348)
T PRK04443 56 ----GDGPPLVLLLGHIDTVPGDIPVRVEDGVLWGRGSVDAKGPLAAFAAAAARL-EA-LVRARVSFVGAVEEEAPSSGG 129 (348)
T ss_pred ----CCCCCEEEEEeeccccCCCCCcEeeCCeEEeecccccccHHHHHHHHHHHh-cc-cCCCCEEEEEEcccccCChhH
Confidence 23346899999997652 1234456788888888888 33 356799999974444445667
Q ss_pred HHHHHhhc
Q 013160 219 AAWLRDYH 226 (448)
Q Consensus 219 ~AWL~aYH 226 (448)
..++.+-.
T Consensus 130 ~~~l~~~~ 137 (348)
T PRK04443 130 ARLVADRE 137 (348)
T ss_pred HHHHHhcc
Confidence 77776543
No 44
>PRK07205 hypothetical protein; Provisional
Probab=95.75 E-value=0.13 Score=54.11 Aligned_cols=127 Identities=13% Similarity=0.098 Sum_probs=76.4
Q ss_pred ecCchhHHHHHHHHHHHhhhhcCCCCC---------ccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCc
Q 013160 65 MLSNQEVSEANKLIKELNNLHSNPLGA---------TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGV 135 (448)
Q Consensus 65 ~f~~~d~~~a~~y~~~l~~l~~~~~~~---------~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~ 135 (448)
|..++....+.++.++|-+..+-+.+. ..+..+|+.++|+++|+++..+.
T Consensus 4 ~~~~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--------------------- 62 (444)
T PRK07205 4 YITEKVQDACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDP--------------------- 62 (444)
T ss_pred HHHHHhHHHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcC---------------------
Confidence 333444444555666665555433221 12356788899999999875431
Q ss_pred cccCCccccccceEEEEEcCCCCCCceeEEEEEEeecCC------------------------CCccccchHHHHHHHHH
Q 013160 136 MQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFS 191 (448)
Q Consensus 136 ~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~~~------------------------~~~~~a~gval~LaLa~ 191 (448)
.|.++++.. +++...++|..|+|..- |..|.-++++.+|..++
T Consensus 63 ---------~~~~~~~~~----g~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~ 129 (444)
T PRK07205 63 ---------KGYYGYAEI----GQGEELLAILCHLDVVPEGDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVK 129 (444)
T ss_pred ---------CCeEEEEEe----cCCCcEEEEEEeeccCCCCCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHH
Confidence 112333322 34456799988886531 12344567877776667
Q ss_pred HhccC-CccccceEEEeeCCCCCCchhHHHHHHhh
Q 013160 192 LLTRV-TWLAKDIIWLVADSQYGEYAPVAAWLRDY 225 (448)
Q Consensus 192 yl~r~-~~wAKDIIfv~~D~~~g~~~G~~AWL~aY 225 (448)
.+++. .-+.++|.|+|+=+++.+..|++++++.+
T Consensus 130 ~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~ 164 (444)
T PRK07205 130 ALLDAGVQFNKRIRFIFGTDEETLWRCMNRYNEVE 164 (444)
T ss_pred HHHHcCCCCCCcEEEEEECCcccCcccHHHHHhCC
Confidence 77655 34568999999743443457999999865
No 45
>PRK05469 peptidase T; Provisional
Probab=95.60 E-value=0.14 Score=53.27 Aligned_cols=100 Identities=9% Similarity=0.041 Sum_probs=68.1
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeecC
Q 013160 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~~ 173 (448)
...+||.++|+++|+++.... ..-||+|.+++....+...|+|.+++|..
T Consensus 33 ~~a~~l~~~l~~~G~~~~~~~------------------------------~~~~v~~~~~g~~~~~~~~i~l~~H~D~v 82 (408)
T PRK05469 33 DLAKLLVEELKELGLQDVTLD------------------------------ENGYVMATLPANVDKDVPTIGFIAHMDTA 82 (408)
T ss_pred HHHHHHHHHHHHcCCCeEEEC------------------------------CCeEEEEEecCCCCCCCCeEEEEEeccCC
Confidence 468999999999999632110 12379999966322245789999998765
Q ss_pred C-------------------------------------------------CC----ccccchHHHHHHHHHHhccCCc-c
Q 013160 174 K-------------------------------------------------GG----VRETLSLGIAYSVFSLLTRVTW-L 199 (448)
Q Consensus 174 ~-------------------------------------------------~~----~~~a~gval~LaLa~yl~r~~~-w 199 (448)
- |. .+..+|++.++..++.|++... +
T Consensus 83 p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~~~ 162 (408)
T PRK05469 83 PDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPEIK 162 (408)
T ss_pred CCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCCCC
Confidence 1 11 3445678888988888877643 4
Q ss_pred ccceEEEeeCCCCCCchhHHHHHHh
Q 013160 200 AKDIIWLVADSQYGEYAPVAAWLRD 224 (448)
Q Consensus 200 AKDIIfv~~D~~~g~~~G~~AWL~a 224 (448)
..+|+|+|+=+++.+ .|+++++.+
T Consensus 163 ~g~v~~~f~~dEE~g-~Ga~~~~~~ 186 (408)
T PRK05469 163 HGDIRVAFTPDEEIG-RGADKFDVE 186 (408)
T ss_pred CCCEEEEEecccccC-CCHHHhhhh
Confidence 469999997444434 688888643
No 46
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=95.58 E-value=0.095 Score=52.89 Aligned_cols=110 Identities=16% Similarity=0.081 Sum_probs=72.6
Q ss_pred HHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCC
Q 013160 78 IKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPR 157 (448)
Q Consensus 78 ~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPR 157 (448)
.++|-+..+.+..+ .+..+||.++|+++|+++... .. .|+++..
T Consensus 3 l~~lv~i~s~s~~e-~~~~~~l~~~l~~~g~~~~~~------------------------------~~-~~~~~~~---- 46 (336)
T TIGR01902 3 LKDLLEIYSPSGKE-ANAAKFLEEISKDLGLKLIID------------------------------DA-GNFILGK---- 46 (336)
T ss_pred HHHHhcCCCCCcch-HHHHHHHHHHHHHcCCEEEEC------------------------------CC-CcEEEEe----
Confidence 34454444433332 367899999999999987310 01 2566543
Q ss_pred CCCceeEEEEEEeecC---------------CCCccccchHHHHHHHHHHhccCCccccceEEEeeCCCCCCchhHHHHH
Q 013160 158 GDGKEAIVLVTPYNAV---------------KGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWL 222 (448)
Q Consensus 158 gdGtEAIVLvap~~~~---------------~~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~~~g~~~G~~AWL 222 (448)
+.+.-.|++..|+|.. .|..+...+++.++..++.|++.. .||+|+++-+++.+..|++..+
T Consensus 47 ~~~~~~i~~~~H~D~vp~~~~~~~~~g~i~GrG~~D~Kg~~aa~l~a~~~l~~~~---~~i~~~~~~dEE~g~~G~~~~~ 123 (336)
T TIGR01902 47 GDGHKKILLAGHVDTVPGYIPVKIEGGLLYGRGAVDAKGPLIAMIFATWLLNEKG---IKVIVSGLVDEESSSKGAREVI 123 (336)
T ss_pred CCCCceEEEEccccccCCCcccEEeCCEEEEecccCCCcHHHHHHHHHHHHHhCC---CcEEEEEEeCcccCCccHHHHH
Confidence 2334579999988764 123445678888888888887765 4899999644444567999999
Q ss_pred Hhhc
Q 013160 223 RDYH 226 (448)
Q Consensus 223 ~aYH 226 (448)
+.+.
T Consensus 124 ~~~~ 127 (336)
T TIGR01902 124 DKNY 127 (336)
T ss_pred hhcC
Confidence 8753
No 47
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=95.50 E-value=0.13 Score=52.25 Aligned_cols=111 Identities=14% Similarity=0.082 Sum_probs=73.2
Q ss_pred HHHHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEE
Q 013160 73 EANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (448)
Q Consensus 73 ~a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygI 152 (448)
++.++..+|-+..+.+.+ .....+||.++|+++|+++.... ..|++.
T Consensus 11 ~~~~~l~~lv~i~s~s~~-e~~~~~~l~~~l~~~g~~~~~~~-------------------------------~~~~~~- 57 (346)
T PRK00466 11 KAKELLLDLLSIYTPSGN-ETNATKFFEKISNELNLKLEILP-------------------------------DSNSFI- 57 (346)
T ss_pred HHHHHHHHHhcCCCCCCC-HHHHHHHHHHHHHHcCCeEEEec-------------------------------CCCcEe-
Confidence 455666666666553332 24678999999999999876432 013331
Q ss_pred EcCCCCCCceeEEEEEEeecC---------------CCCccccchHHHHHHHHHHhccCCccccceEEEeeCCCCCCchh
Q 013160 153 IRAPRGDGKEAIVLVTPYNAV---------------KGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAP 217 (448)
Q Consensus 153 lRAPRgdGtEAIVLvap~~~~---------------~~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~~~g~~~G 217 (448)
.+ ...++|..|+|.. .|..|...+++.+++.++.+++.. ..++|+++-+++.+..|
T Consensus 58 -~g-----~~~lll~gH~DtVp~~~~~~~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~---~~i~~~~~~dEE~g~~G 128 (346)
T PRK00466 58 -LG-----EGDILLASHVDTVPGYIEPKIEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG---IKVMVSGLADEESTSIG 128 (346)
T ss_pred -cC-----CCeEEEEeccccCCCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcC---CCEEEEEEcCcccCCcc
Confidence 11 2348888888764 344555778888888888887765 25888886444445579
Q ss_pred HHHHHHhh
Q 013160 218 VAAWLRDY 225 (448)
Q Consensus 218 ~~AWL~aY 225 (448)
+++++++.
T Consensus 129 ~~~l~~~~ 136 (346)
T PRK00466 129 AKELVSKG 136 (346)
T ss_pred HHHHHhcC
Confidence 99999864
No 48
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=95.50 E-value=0.2 Score=51.95 Aligned_cols=123 Identities=22% Similarity=0.251 Sum_probs=82.4
Q ss_pred HHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCC
Q 013160 78 IKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPR 157 (448)
Q Consensus 78 ~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPR 157 (448)
.+++-+....+.+.....++|+.++|+++|+++....+... . ...|+++....+.
T Consensus 19 l~~lv~~~s~s~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~------------------------~-~~~n~~~~~~~~~ 73 (409)
T COG0624 19 LKELVRIPSVSAGEEAEAAELLAEWLEELGFEVEEDEVGPG------------------------P-GRPNLVARLGGGD 73 (409)
T ss_pred HHHHhcCCCCCcccchHHHHHHHHHHHHcCCceEEeecCCC------------------------C-CceEEEEEecCCC
Confidence 34443333333122346789999999999998775543210 0 2358999988864
Q ss_pred CCCceeEEEEEEeecCC------------------------CCccccchHHHHHHHHHHhcc-CCccccceEEEeeCCCC
Q 013160 158 GDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTR-VTWLAKDIIWLVADSQY 212 (448)
Q Consensus 158 gdGtEAIVLvap~~~~~------------------------~~~~~a~gval~LaLa~yl~r-~~~wAKDIIfv~~D~~~ 212 (448)
++ +.++|..|+|..- |..|+-++++..+..++-+.. ...+.+++.+++.-+++
T Consensus 74 ~~--~~l~l~~H~DvVP~g~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE 151 (409)
T COG0624 74 GG--PTLLLGGHLDVVPAGGGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEE 151 (409)
T ss_pred CC--CeEEEeccccccCCCCcccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccc
Confidence 44 9999999887531 113345677776666666665 57788999999974444
Q ss_pred CCchhHHHHHHhhcC
Q 013160 213 GEYAPVAAWLRDYHT 227 (448)
Q Consensus 213 g~~~G~~AWL~aYH~ 227 (448)
.+..|+.+|++....
T Consensus 152 ~g~~~~~~~~~~~~~ 166 (409)
T COG0624 152 SGGAGGKAYLEEGEE 166 (409)
T ss_pred cCCcchHHHHHhcch
Confidence 445899999999875
No 49
>PRK08201 hypothetical protein; Provisional
Probab=95.50 E-value=0.18 Score=53.28 Aligned_cols=103 Identities=10% Similarity=0.093 Sum_probs=68.2
Q ss_pred chHHHHHHHHHhcCCc-eeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeec
Q 013160 94 ESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLe-v~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~ 172 (448)
+..+||.++|+++|++ +..+.. ....|+++.+... .+...++|..|+|.
T Consensus 41 ~~a~~l~~~l~~~G~~~~~~~~~----------------------------~~~~~l~a~~~~~--~~~~~lll~gH~Dv 90 (456)
T PRK08201 41 KAAEWLAGALEKAGLEHVEIMET----------------------------AGHPIVYADWLHA--PGKPTVLIYGHYDV 90 (456)
T ss_pred HHHHHHHHHHHHcCCCeEEEEec----------------------------CCCCEEEEEecCC--CCCCEEEEEeccCC
Confidence 4679999999999997 443320 0124888877541 23346999988866
Q ss_pred CC------------------------CCccccchHHHHHHHHHHhccC-CccccceEEEeeCCCCCCchhHHHHHHhhc
Q 013160 173 VK------------------------GGVRETLSLGIAYSVFSLLTRV-TWLAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (448)
Q Consensus 173 ~~------------------------~~~~~a~gval~LaLa~yl~r~-~~wAKDIIfv~~D~~~g~~~G~~AWL~aYH 226 (448)
.. |..+..++++.+++.++.+.+. ..+..+|.|+++-+++.+..|+..|++++.
T Consensus 91 Vp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~ 169 (456)
T PRK08201 91 QPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPNLDSFVEEEK 169 (456)
T ss_pred cCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCccHHHHHHhhH
Confidence 21 1133457888888888777653 345569999997444444568999998763
No 50
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=95.49 E-value=0.13 Score=52.85 Aligned_cols=130 Identities=11% Similarity=0.091 Sum_probs=81.1
Q ss_pred HHHHHHHHHHhhhhcCCC--CCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceE
Q 013160 72 SEANKLIKELNNLHSNPL--GATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINT 149 (448)
Q Consensus 72 ~~a~~y~~~l~~l~~~~~--~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~Nv 149 (448)
+.+.++.+++-+..+.+. +...+..+||.++|+++|+++..+...... .+.. .....|+
T Consensus 6 ~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~------------------~~~~-~~~~~~~ 66 (394)
T PRK08651 6 FDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNEY------------------VKKH-DGPRPNL 66 (394)
T ss_pred HHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCccc------------------cccc-cCCcceE
Confidence 345556666666665431 222357899999999999987655421100 0000 0113466
Q ss_pred EEEEcCCCCCCceeEEEEEEeecCC-----------------------CCccccchHHHHHHHHHHhccCCccccceEEE
Q 013160 150 VGIIRAPRGDGKEAIVLVTPYNAVK-----------------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWL 206 (448)
Q Consensus 150 ygIlRAPRgdGtEAIVLvap~~~~~-----------------------~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv 206 (448)
++.. +.+.-.|+|.++.|... |..++..+++.+|+.++.+++.. .++|.|+
T Consensus 67 ~~~~----~~~~~~ill~~HlDtvp~~~~~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~--~~~v~~~ 140 (394)
T PRK08651 67 IARR----GSGNPHLHFNGHYDVVPPGEGWSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG--DGNIELA 140 (394)
T ss_pred EEEe----CCCCceEEEEeeeeeecCCCCccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC--CCCEEEE
Confidence 6643 22336799888876431 11223568999999999998766 7899999
Q ss_pred eeCCCCCCchhHHHHHHhhc
Q 013160 207 VADSQYGEYAPVAAWLRDYH 226 (448)
Q Consensus 207 ~~D~~~g~~~G~~AWL~aYH 226 (448)
|.-+++.+..|+++++++..
T Consensus 141 ~~~~EE~g~~G~~~~~~~~~ 160 (394)
T PRK08651 141 IVPDEETGGTGTGYLVEEGK 160 (394)
T ss_pred EecCccccchhHHHHHhccC
Confidence 97444434479999998754
No 51
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=95.38 E-value=0.18 Score=50.96 Aligned_cols=114 Identities=15% Similarity=0.137 Sum_probs=73.6
Q ss_pred HHHHHHHHHhhhhcCCCCCccchHHHHHHHHHhc-CCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEE
Q 013160 73 EANKLIKELNNLHSNPLGATTESHGIIAKYMSNL-GAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVG 151 (448)
Q Consensus 73 ~a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~l-GLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~Nvyg 151 (448)
++.++.+++-+..+.+.++ ....+||.++|+++ |+++.. .+.|+++
T Consensus 8 ~~~~~l~~li~ips~s~~e-~~~~~~l~~~l~~~~~~~~~~--------------------------------~~~~~~~ 54 (352)
T PRK13007 8 DLAELTAALVDIPSVSGDE-KALADAVEAALRALPHLEVIR--------------------------------HGNSVVA 54 (352)
T ss_pred HHHHHHHHHhcCCCCCchH-HHHHHHHHHHHHhCcCceEEe--------------------------------cCCeEEE
Confidence 3455566666655544433 35789999999996 765421 2358888
Q ss_pred EEcCCCCCCceeEEEEEEeecC-----------------CCCccccchHHHHHHHHHHhccCCccccceEEEee-CCCCC
Q 013160 152 IIRAPRGDGKEAIVLVTPYNAV-----------------KGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVA-DSQYG 213 (448)
Q Consensus 152 IlRAPRgdGtEAIVLvap~~~~-----------------~~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~-D~~~g 213 (448)
.+.. +.+ ..|+|.+++|.. .|..|...++|.++++++.+.. ..++|.|+|+ |.+.+
T Consensus 55 ~~~~--~~~-~~i~l~~H~Dtvp~~~~~~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~---~~~~i~~~~~~~EE~~ 128 (352)
T PRK13007 55 RTDL--GRP-SRVVLAGHLDTVPVADNLPSRREGDRLYGCGASDMKSGLAVMLHLAATLAE---PAHDLTLVFYDCEEVE 128 (352)
T ss_pred EccC--CCC-CeEEEEccccccCCCCCCCcceeCCEEEccCcccccHHHHHHHHHHHHhhc---cCCCeEEEEEeccccc
Confidence 8732 222 259998888763 1233446789999999998843 4679999996 54332
Q ss_pred C-chhHHHHHHhh
Q 013160 214 E-YAPVAAWLRDY 225 (448)
Q Consensus 214 ~-~~G~~AWL~aY 225 (448)
. ..|++..++.+
T Consensus 129 ~~~~G~~~~~~~~ 141 (352)
T PRK13007 129 AEANGLGRLAREH 141 (352)
T ss_pred CCcccHHHHHHhc
Confidence 2 25888877653
No 52
>PLN02693 IAA-amino acid hydrolase
Probab=94.98 E-value=0.31 Score=51.88 Aligned_cols=119 Identities=8% Similarity=0.086 Sum_probs=81.0
Q ss_pred HHHHHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEE
Q 013160 72 SEANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVG 151 (448)
Q Consensus 72 ~~a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~Nvyg 151 (448)
....+++++|.....-+..+ .+..++|.++|+++|+++.. . ..++|++|
T Consensus 47 ~~~~~~r~~lh~~PE~s~~E-~~ta~~i~~~L~~~G~~~~~-~-----------------------------~~~~~via 95 (437)
T PLN02693 47 DWMVRIRRKIHENPELGYEE-FETSKLIRSELDLIGIKYRY-P-----------------------------VAITGIIG 95 (437)
T ss_pred HHHHHHHHHHHhCCCCCCch-HHHHHHHHHHHHHCCCeeEe-c-----------------------------CCCcEEEE
Confidence 34566777777766555544 36789999999999998531 1 12579999
Q ss_pred EEcCCCCCCceeEEEEEEeecCCCC-----------------ccccchHHHHHHHHHHhccCC-ccccceEEEeeCCCCC
Q 013160 152 IIRAPRGDGKEAIVLVTPYNAVKGG-----------------VRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYG 213 (448)
Q Consensus 152 IlRAPRgdGtEAIVLvap~~~~~~~-----------------~~~a~gval~LaLa~yl~r~~-~wAKDIIfv~~D~~~g 213 (448)
++... +| -.|++.+++|.--.. -+--.+++.+++.++.|++.. .+..+|.|+|+-++++
T Consensus 96 ~~g~~--~g-~~i~l~~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~ 172 (437)
T PLN02693 96 YIGTG--EP-PFVALRADMDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEG 172 (437)
T ss_pred EECCC--CC-CEEEEEeecCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccc
Confidence 98432 23 479999988763210 001136888888899998764 4677999999755543
Q ss_pred CchhHHHHHHhh
Q 013160 214 EYAPVAAWLRDY 225 (448)
Q Consensus 214 ~~~G~~AWL~aY 225 (448)
..|.++++++.
T Consensus 173 -~~Ga~~~i~~g 183 (437)
T PLN02693 173 -LSGAKKMREEG 183 (437)
T ss_pred -hhhHHHHHHCC
Confidence 36899999864
No 53
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=94.74 E-value=0.6 Score=48.27 Aligned_cols=123 Identities=11% Similarity=-0.018 Sum_probs=75.6
Q ss_pred HHHHHHHHhhhhcCCCC-CccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEE
Q 013160 74 ANKLIKELNNLHSNPLG-ATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (448)
Q Consensus 74 a~~y~~~l~~l~~~~~~-~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygI 152 (448)
+.++.++|-+..+.+.. ...+..+||.++|+++|+++...... ..+.|+++.
T Consensus 11 ~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~---------------------------~g~~~l~~~ 63 (400)
T TIGR01880 11 AVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFV---------------------------PGKPVVVLT 63 (400)
T ss_pred HHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEec---------------------------CCceeEEEE
Confidence 33455666555554322 12357899999999999987543310 014588888
Q ss_pred EcCCCCCCceeEEEEEEeecCC------------------------CCccccchHHHHHHHHHHhccCC-ccccceEEEe
Q 013160 153 IRAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLV 207 (448)
Q Consensus 153 lRAPRgdGtEAIVLvap~~~~~------------------------~~~~~a~gval~LaLa~yl~r~~-~wAKDIIfv~ 207 (448)
+++... +.--|+|.+++|..- |..+.-.+++.++..++.+++.. -+.++|.|+|
T Consensus 64 ~~g~~~-~~~~i~l~~H~DvVp~~~~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~ 142 (400)
T TIGR01880 64 WPGSNP-ELPSILLNSHTDVVPVFREHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISF 142 (400)
T ss_pred EecCCC-CCCeEEEEcccccCCCCcccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEE
Confidence 764211 112588888775431 11233456777777777777654 3568999999
Q ss_pred eCCCCC-CchhHHHHHHh
Q 013160 208 ADSQYG-EYAPVAAWLRD 224 (448)
Q Consensus 208 ~D~~~g-~~~G~~AWL~a 224 (448)
+-+++. ...|++..+++
T Consensus 143 ~~dEE~g~~~G~~~~~~~ 160 (400)
T TIGR01880 143 VPDEEIGGHDGMEKFAKT 160 (400)
T ss_pred eCCcccCcHhHHHHHHHh
Confidence 744443 34699887765
No 54
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=94.70 E-value=0.56 Score=48.59 Aligned_cols=117 Identities=11% Similarity=0.051 Sum_probs=71.3
Q ss_pred HHHHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEE
Q 013160 73 EANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (448)
Q Consensus 73 ~a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygI 152 (448)
++.++.++|-+..+-+.++ ....+||.++|+++|+++.... ...|+++.
T Consensus 14 ~~~~~l~~Lv~ips~s~~e-~~~~~~l~~~l~~~g~~~~~~~------------------------------~~~~v~~~ 62 (395)
T TIGR03526 14 DMIRFLRDLVAIPSESGDE-GRVALRIKQEMEKLGFDKVEID------------------------------PMGNVLGY 62 (395)
T ss_pred HHHHHHHHHhcCCCCCCch-HHHHHHHHHHHHHcCCceEEEc------------------------------CCCcEEEE
Confidence 3445555555555444332 3578999999999998742110 01378887
Q ss_pred EcCCCCCCceeEEEEEEeecCC------------------------CCccccchHHHHHHHHHHhccCCc-cccceEEEe
Q 013160 153 IRAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLV 207 (448)
Q Consensus 153 lRAPRgdGtEAIVLvap~~~~~------------------------~~~~~a~gval~LaLa~yl~r~~~-wAKDIIfv~ 207 (448)
+. ++...|+|.+++|... |..+...+++.++..++.+++..+ +.++++|++
T Consensus 63 ~g----~~~~~l~l~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~ 138 (395)
T TIGR03526 63 IG----HGPKLIAMDAHIDTVGIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTG 138 (395)
T ss_pred eC----CCCCEEEEEeeccccCCCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEE
Confidence 72 3446788888776421 112234678888888888877654 456898888
Q ss_pred eCCCC-CCchhHHHHHHh
Q 013160 208 ADSQY-GEYAPVAAWLRD 224 (448)
Q Consensus 208 ~D~~~-g~~~G~~AWL~a 224 (448)
+.+++ +.-.|.+.++++
T Consensus 139 ~~dEE~~~g~~~~~~~~~ 156 (395)
T TIGR03526 139 TVQEEDCDGLCWQYIIEE 156 (395)
T ss_pred ecccccCCcHhHHHHHhc
Confidence 74443 222455666764
No 55
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=94.40 E-value=0.5 Score=48.31 Aligned_cols=117 Identities=15% Similarity=0.180 Sum_probs=73.4
Q ss_pred HHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcC
Q 013160 76 KLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRA 155 (448)
Q Consensus 76 ~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRA 155 (448)
++.++|-+..+.+..+ .+..+||.++|+++|+++.... ....|+++.+..
T Consensus 3 ~~~~~L~~ips~s~~E-~~~a~~l~~~l~~~g~~~~~~~-----------------------------~~~~~vva~~~~ 52 (363)
T TIGR01891 3 DIRRHLHEHPELSFEE-FKTSSLIAEALESLGIEVRRGV-----------------------------GGATGVVATIGG 52 (363)
T ss_pred HHHHHHhcCCCCCCch-HHHHHHHHHHHHHcCCceEecC-----------------------------CCCcEEEEEEeC
Confidence 4556666665544433 4688999999999999875310 013588888754
Q ss_pred CCCCCceeEEEEEEeecCCCC----------ccc-------cchHHHHHHHHHHhccCCc-cccceEEEeeCCCCCCchh
Q 013160 156 PRGDGKEAIVLVTPYNAVKGG----------VRE-------TLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYGEYAP 217 (448)
Q Consensus 156 PRgdGtEAIVLvap~~~~~~~----------~~~-------a~gval~LaLa~yl~r~~~-wAKDIIfv~~D~~~g~~~G 217 (448)
.. ++ -.|+|..++|..-.. .++ ..++|.+++.++.+++... +-+||.|+|+-+++.. .|
T Consensus 53 ~~-~~-~~i~l~gH~DtVp~~~~~~~pf~~~~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G 129 (363)
T TIGR01891 53 GK-PG-PVVALRADMDALPIQEQTDLPYKSTNPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGG-GG 129 (363)
T ss_pred CC-CC-CEEEEEeccCCCCcccccCCCcccCCCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCc-ch
Confidence 21 12 469999988753100 000 1346777777877776432 3469999996444332 68
Q ss_pred HHHHHHhh
Q 013160 218 VAAWLRDY 225 (448)
Q Consensus 218 ~~AWL~aY 225 (448)
++.++++.
T Consensus 130 ~~~~~~~~ 137 (363)
T TIGR01891 130 ATKMIEDG 137 (363)
T ss_pred HHHHHHCC
Confidence 98888763
No 56
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=94.38 E-value=1.5 Score=47.57 Aligned_cols=182 Identities=12% Similarity=0.106 Sum_probs=99.5
Q ss_pred HHHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEE
Q 013160 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (448)
Q Consensus 74 a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIl 153 (448)
.-++.++|-+..+.+.+. ....+||.++++++|+++.... . -|+++..
T Consensus 12 ~~~~l~~Lv~ips~S~~e-~~~~~~l~~~~~~~G~~~~~d~------------------------------~-gnvi~~~ 59 (485)
T PRK15026 12 LWDIFAKICSIPHPSYHE-EQLAEYIVGWAKEKGFHVERDQ------------------------------V-GNILIRK 59 (485)
T ss_pred HHHHHHHHhCCCCCCCCH-HHHHHHHHHHHHhCCCEEEEEe------------------------------c-CeEEEEE
Confidence 445566666666544332 4678999999999999875321 1 2777776
Q ss_pred cCCCC-CCceeEEEEEEeecCC---------------------------CC---ccccchHHHHHHHHHHhccCCccccc
Q 013160 154 RAPRG-DGKEAIVLVTPYNAVK---------------------------GG---VRETLSLGIAYSVFSLLTRVTWLAKD 202 (448)
Q Consensus 154 RAPRg-dGtEAIVLvap~~~~~---------------------------~~---~~~a~gval~LaLa~yl~r~~~wAKD 202 (448)
.+..+ .+...++|.+|.|..- |. .++..|++.+|+++ +.......+
T Consensus 60 ~~~~g~~~~~~v~l~gH~DtV~~~~~~~~~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~~~~~ 136 (485)
T PRK15026 60 PATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---ADENVVHGP 136 (485)
T ss_pred cCCCCCCCCCEEEEEeeecccCCCCCCccccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---HhCCCCCCC
Confidence 65333 3456688877765421 11 13334566665554 333334679
Q ss_pred eEEEeeCCCCCCchhHHHHHHhhcCCCCCCCCCCcccccccCCCCccccccc--cccchhhhheeeEEeecCC--CCCcc
Q 013160 203 IIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISY--GIRRSGTMAAALVLGVAYG--NENED 278 (448)
Q Consensus 203 IIfv~~D~~~g~~~G~~AWL~aYH~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~RaGsIqAAlvLe~~~~--~~~~d 278 (448)
|.++|+-+++-+..|++++...+-.+. -.++ .|+.+.. ....+|.+..-+.+.+... .....
T Consensus 137 i~~l~t~dEE~G~~ga~~l~~~~~~~~----~~i~----------~e~~~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~ 202 (485)
T PRK15026 137 LEVLLTMTEEAGMDGAFGLQSNWLQAD----ILIN----------TDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFE 202 (485)
T ss_pred EEEEEEcccccCcHhHHHhhhccCCcC----EEEE----------eCCCCCCeEEEeCCCcceEEEEEEEEEEecCCCce
Confidence 999997544445678888755332221 1111 1111111 1245565554433433321 11346
Q ss_pred eEEEEEeecC----CCCCChhHHHHHHHHH
Q 013160 279 TLGIYAEASN----GQMPNLDLINIVHYLA 304 (448)
Q Consensus 279 ~l~I~~EG~N----GqLPNLDLiN~v~~la 304 (448)
.+.|.+.|+. |.-|....-|.+..+|
T Consensus 203 ~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la 232 (485)
T PRK15026 203 TFKLTLKGLKGGHSGGEIHVGLGNANKLLV 232 (485)
T ss_pred EEEEEEECCCCcCChHHHCCCCccHHHHHH
Confidence 7899999855 4456666546655443
No 57
>PRK07318 dipeptidase PepV; Reviewed
Probab=94.20 E-value=0.53 Score=50.08 Aligned_cols=48 Identities=13% Similarity=0.223 Sum_probs=34.3
Q ss_pred ccccchHHHHHHHHHHhccCC-ccccceEEEee-CCCCCCchhHHHHHHhh
Q 013160 177 VRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVA-DSQYGEYAPVAAWLRDY 225 (448)
Q Consensus 177 ~~~a~gval~LaLa~yl~r~~-~wAKDIIfv~~-D~~~g~~~G~~AWL~aY 225 (448)
.+..++++.++..++.+++.. -+.++|.|+|+ |-+. +..|++.+++.+
T Consensus 117 ~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~-g~~G~~~l~~~~ 166 (466)
T PRK07318 117 SDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEES-GWKCMDYYFEHE 166 (466)
T ss_pred ccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEccccc-CchhHHHHHHhC
Confidence 344567887777777777654 35679999996 5443 457999999875
No 58
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=94.09 E-value=0.15 Score=57.59 Aligned_cols=225 Identities=12% Similarity=0.086 Sum_probs=116.8
Q ss_pred cccceEEEEEcCCCCCCceeEEEEEEeecCC-CCccccchHHHHHHHHHHhcc-----CCccccceEEEeeCCCCCCchh
Q 013160 144 LYGINTVGIIRAPRGDGKEAIVLVTPYNAVK-GGVRETLSLGIAYSVFSLLTR-----VTWLAKDIIWLVADSQYGEYAP 217 (448)
Q Consensus 144 ~~G~NvygIlRAPRgdGtEAIVLvap~~~~~-~~~~~a~gval~LaLa~yl~r-----~~~wAKDIIfv~~D~~~g~~~G 217 (448)
..=.||+|.+++. ...--.|||.+|.|++. |+.+.+.|.++++.++++|+. |... |.|+|..-|+++.++.|
T Consensus 336 ~ki~NIig~I~Gs-~epD~~ViigahrDSw~~Ga~dp~sGta~Ll~i~~~~~~~~k~gwrP~-RtI~F~sWdAeEfGliG 413 (702)
T KOG2195|consen 336 TKIQNIIGKIEGS-EEPDRYVIIGAHRDSWTFGAIDPNSGTALLLEIARALSKLKKRGWRPR-RTILFASWDAEEFGLLG 413 (702)
T ss_pred eeeeeEEEEEecC-cCCCeEEEEeccccccccCCcCCCccHHHHHHHHHHHHHHHHcCCCcc-ceEEEEEccchhccccc
Confidence 4567999999983 44556788888888875 344446788888888877733 4444 88999999999889999
Q ss_pred HHHHHHhhcCCCCC-CCCCCcccccccCCC-CccccccccccchhhhheeeEEeecCCCCCcceEEEEEeecCCCCCChh
Q 013160 218 VAAWLRDYHTPAFS-NLDSLNTETCHVGNN-NFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLD 295 (448)
Q Consensus 218 ~~AWL~aYH~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~RaGsIqAAlvLe~~~~~~~~d~l~I~~EG~NGqLPNLD 295 (448)
.-.|+++|-..... ..-.+|.+...-.+. -... ..+..+.....++=.++-+...+.-..+.-. -|.+.-.|.+.
T Consensus 414 StE~~E~~~~~L~~~av~yin~d~~~~~~~~l~~~--~~PlL~~li~~~~k~~~~p~~~~~~~~v~~~-g~~Sd~~~F~~ 490 (702)
T KOG2195|consen 414 STEWAEEYLKNLKSRAVVYINVDNAVLGDYTLHVK--TTPLLTDLIEEAAKSVLSPDKGDQSNRVLSL-GGGSDYASFLQ 490 (702)
T ss_pred cHHHHHHHHHHhhheeEEEEeccccccCCceeEEe--cCccHHHHHHHHHhccCCCCccccceeEecc-CCCCcchhhcc
Confidence 99999999764221 111122121111111 0000 0111233333344333333322111113333 55566666555
Q ss_pred HHHHHH-HHHhhccCcc---ccccc---cccccchhhhhhhHHHHHHHhhhhhhhCCCcccCCChhhHHHHHHHHHHHHh
Q 013160 296 LINIVH-YLAVHRQGLR---VKVEQ---FHWLLNSKWVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLY 368 (448)
Q Consensus 296 LiN~v~-~la~~~~G~~---v~l~~---~~~~~~~~wl~~l~~~~~~i~k~~~~~~~~~~~~~~~~~y~~~~~~l~~s~~ 368 (448)
-.=+.. .++-.+ ..+ ...+. +....|..|-..+.-+-.+..-+....+ +=-+-....+|++...+-+..+.
T Consensus 491 ~~GIpsv~~~f~~-~yP~yhs~~dt~~~~~k~~D~~~~~~~~~a~~~~~~~l~l~~-d~llPfd~~~Y~~~l~~~~~~l~ 568 (702)
T KOG2195|consen 491 FAGIPSVDFAFNR-TYPFYHSTYDTYEWLDKLLDPKFKQHLAAAGVLGLELLILAD-DPLLPFDISDYADVLLKTLPKLE 568 (702)
T ss_pred ccCcceeeeeecC-CcceeecccCcHHHHHHhcchhHHHHHHHHHHHHHHHHHHhc-CccccCcHHHHHHHHHHHHHHHH
Confidence 322221 111111 111 11111 1124444444433333333333334333 33333566889888888777776
Q ss_pred hhhccce
Q 013160 369 HQVVFSL 375 (448)
Q Consensus 369 ~QalG~~ 375 (448)
.+-....
T Consensus 569 ~~~~~~~ 575 (702)
T KOG2195|consen 569 ELSPDKV 575 (702)
T ss_pred hhccccc
Confidence 6665554
No 59
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=94.08 E-value=0.67 Score=47.26 Aligned_cols=114 Identities=18% Similarity=0.150 Sum_probs=67.9
Q ss_pred HHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCC
Q 013160 77 LIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAP 156 (448)
Q Consensus 77 y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAP 156 (448)
+.++|-+..+.+..+ ...++||.++|+++|+++..++.. ...|+++.. .
T Consensus 4 ~l~~lv~ips~s~~e-~~~~~~i~~~l~~~G~~~~~~~~~----------------------------~~~~~~~~~-g- 52 (370)
T TIGR01246 4 LAKELISRPSVTPND-AGCQDIIAERLEKLGFEIEWMHFG----------------------------DTKNLWATR-G- 52 (370)
T ss_pred HHHHHhcCCCCCcch-HHHHHHHHHHHHHCCCEEEEEecC----------------------------CCceEEEEe-c-
Confidence 445555555444332 357899999999999997655310 123777763 2
Q ss_pred CCCCceeEEEEEEeecCCCC------------------------ccccchHHHH-HHHHHHhccCCccccceEEEeeCCC
Q 013160 157 RGDGKEAIVLVTPYNAVKGG------------------------VRETLSLGIA-YSVFSLLTRVTWLAKDIIWLVADSQ 211 (448)
Q Consensus 157 RgdGtEAIVLvap~~~~~~~------------------------~~~a~gval~-LaLa~yl~r~~~wAKDIIfv~~D~~ 211 (448)
.+...|++.+++|..... .|.-.+++.+ .++.++++....+.++|.|+|.-++
T Consensus 53 --~~~~~i~~~~H~DtVp~~~~~~W~~~p~~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dE 130 (370)
T TIGR01246 53 --TGEPVLAFAGHTDVVPAGPEEQWSSPPFEPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDE 130 (370)
T ss_pred --CCCcEEEEEccccccCCCCccccccCCCCcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEecc
Confidence 234568888887653110 1223455554 4544555555567789999996444
Q ss_pred CC-CchhHHHHHH
Q 013160 212 YG-EYAPVAAWLR 223 (448)
Q Consensus 212 ~g-~~~G~~AWL~ 223 (448)
+. ...|+++.++
T Consensus 131 E~~~~~G~~~~~~ 143 (370)
T TIGR01246 131 EGTAIDGTKKVVE 143 (370)
T ss_pred ccCCCcCHHHHHH
Confidence 32 2357777765
No 60
>PRK08554 peptidase; Reviewed
Probab=93.37 E-value=1.1 Score=47.57 Aligned_cols=98 Identities=15% Similarity=0.228 Sum_probs=62.1
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeecC
Q 013160 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~~ 173 (448)
+..+|+.++|+++|+++..+... ...|+++.+. .+.+.|+|..|+|..
T Consensus 28 ~~~~~l~~~l~~~G~~~~~~~~~----------------------------~~~~l~~~~~----~~~~~l~l~gH~DtV 75 (438)
T PRK08554 28 ECPKFIKDTLESWGIESELIEKD----------------------------GYYAVYGEIG----EGKPKLLFMAHFDVV 75 (438)
T ss_pred HHHHHHHHHHHHCCCeEEEEecC----------------------------CceEEEEEeC----CCCCEEEEEeccccC
Confidence 57799999999999987644310 1247777752 234568888877642
Q ss_pred C-----------------------CCccccchHHHHHHHHHHhccCCccccceEEEee-CCCCCCchhHHHHHHhh
Q 013160 174 K-----------------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVA-DSQYGEYAPVAAWLRDY 225 (448)
Q Consensus 174 ~-----------------------~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~-D~~~g~~~G~~AWL~aY 225 (448)
- |..|..++++.++..++.+++.. +.++|.|+|+ |.+.+. .+....++.+
T Consensus 76 p~~~~~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~~-~~~~i~l~~~~dEE~g~-~~~~~~~~~~ 149 (438)
T PRK08554 76 PVNPEEWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKEP-LNGKVIFAFTGDEEIGG-AMAMHIAEKL 149 (438)
T ss_pred CCCccccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhcC-CCCCEEEEEEcccccCc-cccHHHHHHH
Confidence 1 11233467888887788887765 5689999996 544332 3333444443
No 61
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=93.21 E-value=1.5 Score=45.40 Aligned_cols=117 Identities=11% Similarity=0.064 Sum_probs=69.3
Q ss_pred HHHHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEE
Q 013160 73 EANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (448)
Q Consensus 73 ~a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygI 152 (448)
.+.++.++|-+..+.+.++ ....+||.++|+++|+++.... ...|++|.
T Consensus 14 ~~~~~~~~lv~i~s~s~~e-~~~~~~l~~~l~~~G~~~~~~~------------------------------~~~n~~~~ 62 (395)
T TIGR03320 14 DMIRFLRDLVAIPSESGDE-KRVAERIKEEMEKLGFDKVEID------------------------------PMGNVLGY 62 (395)
T ss_pred HHHHHHHHHHcCCCCCCch-HHHHHHHHHHHHHhCCcEEEEC------------------------------CCCCEEEE
Confidence 3445555555555443332 3678999999999999742110 01367887
Q ss_pred EcCCCCCCceeEEEEEEeecCC------------------------CCccccchHHHHHHHHHHhccCC-ccccceEEEe
Q 013160 153 IRAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLV 207 (448)
Q Consensus 153 lRAPRgdGtEAIVLvap~~~~~------------------------~~~~~a~gval~LaLa~yl~r~~-~wAKDIIfv~ 207 (448)
+. .+...+++.+++|..- |..+...+++.++..++.+++.. .+..+|+|++
T Consensus 63 ~g----~~~~~l~l~~H~DtVp~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~ 138 (395)
T TIGR03320 63 IG----HGPKLIAMDAHIDTVGIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTG 138 (395)
T ss_pred eC----CCCcEEEEEecccccCCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEe
Confidence 62 2335688888776421 12233567888888888887754 3556888888
Q ss_pred eCCCC-CCchhHHHHHHh
Q 013160 208 ADSQY-GEYAPVAAWLRD 224 (448)
Q Consensus 208 ~D~~~-g~~~G~~AWL~a 224 (448)
+.+++ ++-.+++..+++
T Consensus 139 ~~dEE~~~g~~~~~~~~~ 156 (395)
T TIGR03320 139 TVQEEDCDGLCWQYIIEE 156 (395)
T ss_pred cccccccCchHHHHHHHh
Confidence 63332 222344555544
No 62
>PLN02280 IAA-amino acid hydrolase
Probab=93.19 E-value=1.3 Score=47.79 Aligned_cols=96 Identities=9% Similarity=0.129 Sum_probs=65.3
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeecC
Q 013160 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~~ 173 (448)
+..+||.++|+++|+++..+ ..++|++|++ . ++.+ ..|++.+++|.-
T Consensus 118 ~t~~~i~~~L~~~G~~~~~~------------------------------~~~~~vva~~-g-~~~~-~~I~l~gh~DaV 164 (478)
T PLN02280 118 KTSELVRSELDRMGIMYRYP------------------------------LAKTGIRAWI-G-TGGP-PFVAVRADMDAL 164 (478)
T ss_pred HHHHHHHHHHHHCCCeEEec------------------------------CCCCEEEEEE-C-CCCC-CEEEEEEecCCC
Confidence 57899999999999986432 1256999987 2 1223 578888877653
Q ss_pred CCC------------------ccccchHHHHHHHHHHhccCC-ccccceEEEeeCCCCCCchhHHHHHHh
Q 013160 174 KGG------------------VRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRD 224 (448)
Q Consensus 174 ~~~------------------~~~a~gval~LaLa~yl~r~~-~wAKDIIfv~~D~~~g~~~G~~AWL~a 224 (448)
-.. ..+ .++|.++++++++++.. -+.-+|.|+|+-+++.+ .|.++-+++
T Consensus 165 P~~e~~~w~~~p~~~G~~h~cGhd-~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g-~Ga~~li~~ 232 (478)
T PLN02280 165 PIQEAVEWEHKSKVAGKMHACGHD-AHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAG-NGAKRMIGD 232 (478)
T ss_pred cccCCCCCCCCCCCCCeEEeCCCc-HHHHHHHHHHHHHHhccccCCceEEEEeccccccc-chHHHHHHC
Confidence 110 011 37888899889997643 34569999997555443 488888875
No 63
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=92.93 E-value=0.33 Score=51.84 Aligned_cols=80 Identities=19% Similarity=0.356 Sum_probs=59.8
Q ss_pred cccceEEEEEc-CCC--CCC--ceeEEEEEEeecC-------CCCccccchHHHHHHHHHHhccC----Ccc-ccceEEE
Q 013160 144 LYGINTVGIIR-APR--GDG--KEAIVLVTPYNAV-------KGGVRETLSLGIAYSVFSLLTRV----TWL-AKDIIWL 206 (448)
Q Consensus 144 ~~G~NvygIlR-APR--gdG--tEAIVLvap~~~~-------~~~~~~a~gval~LaLa~yl~r~----~~w-AKDIIfv 206 (448)
..=.||.|.+. +-| ||| --.|++|++||.- -|++.|.+|+..+|-|++.|++- +-. .-++.|+
T Consensus 191 ~ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap~lsvgADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~ 270 (555)
T KOG2526|consen 191 YKILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAPGLSVGADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFI 270 (555)
T ss_pred CccceEEeecccccccccccccCCeEEEEEeccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEE
Confidence 34579999998 666 333 4569999999874 24566678898899999999762 122 3589999
Q ss_pred eeCCCCCCchhHHHHHH
Q 013160 207 VADSQYGEYAPVAAWLR 223 (448)
Q Consensus 207 ~~D~~~g~~~G~~AWL~ 223 (448)
.+++.--.++|.+-||+
T Consensus 271 lt~aG~lNyqGTkkWLe 287 (555)
T KOG2526|consen 271 LTAAGKLNYQGTKKWLE 287 (555)
T ss_pred EccCccccccchhhhhh
Confidence 99874345799999998
No 64
>PRK07079 hypothetical protein; Provisional
Probab=91.96 E-value=2.5 Score=45.03 Aligned_cols=126 Identities=10% Similarity=-0.007 Sum_probs=75.5
Q ss_pred HHHHHHHHhhhhcCCCC--CccchHHHH----HHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccc
Q 013160 74 ANKLIKELNNLHSNPLG--ATTESHGII----AKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGI 147 (448)
Q Consensus 74 a~~y~~~l~~l~~~~~~--~~~~~~~~l----~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~ 147 (448)
+.++.++|-+..+.+.. ...+.++|+ .++|+++|+++..+.... .....
T Consensus 19 ~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~-------------------------~~~~~ 73 (469)
T PRK07079 19 FFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPV-------------------------AGGGP 73 (469)
T ss_pred HHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCC-------------------------CCCCC
Confidence 44555555555544321 112345555 558999999987553110 01236
Q ss_pred eEEEEEcCCCCCCceeEEEEEEeecCC-------------------------CCccccchHHHHHHHHHHhcc-C-Cccc
Q 013160 148 NTVGIIRAPRGDGKEAIVLVTPYNAVK-------------------------GGVRETLSLGIAYSVFSLLTR-V-TWLA 200 (448)
Q Consensus 148 NvygIlRAPRgdGtEAIVLvap~~~~~-------------------------~~~~~a~gval~LaLa~yl~r-~-~~wA 200 (448)
||++.+.. +.+...++|..|+|..- |..|..++++.+++.++.+.+ . .-+.
T Consensus 74 ~vva~~~~--~~~~~~lll~gH~DvVp~~~~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~ 151 (469)
T PRK07079 74 FLIAERIE--DDALPTVLIYGHGDVVRGYDEQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLG 151 (469)
T ss_pred EEEEEeCC--CCCCCEEEEEcccCCCCCChHHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCC
Confidence 88888743 12235799988776321 113345677777766676643 2 3456
Q ss_pred cceEEEeeCCCCCCchhHHHHHHhhc
Q 013160 201 KDIIWLVADSQYGEYAPVAAWLRDYH 226 (448)
Q Consensus 201 KDIIfv~~D~~~g~~~G~~AWL~aYH 226 (448)
.+|.|+++-+++.+..|++.+++++.
T Consensus 152 ~~i~~~~~~dEE~g~~G~~~l~~~~~ 177 (469)
T PRK07079 152 FNVKLLIEMGEEIGSPGLAEVCRQHR 177 (469)
T ss_pred CCEEEEEECccccCCccHHHHHHHhH
Confidence 79999997444445579999999874
No 65
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=91.31 E-value=2.5 Score=45.18 Aligned_cols=97 Identities=15% Similarity=0.254 Sum_probs=60.8
Q ss_pred hHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeecC-
Q 013160 95 SHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV- 173 (448)
Q Consensus 95 ~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~~- 173 (448)
..+|+.++|+++|+++..+. |+.|.+. -+++...+++..|+|..
T Consensus 47 ~~~~~~~~~~~~G~~~~~~~---------------------------------~~~~~~~--~~~~~~~l~~~gH~DvVp 91 (466)
T TIGR01886 47 ALTKFLSFAERDGFTTKNFD---------------------------------NYAGHVE--YGAGDERLGIIGHMDVVP 91 (466)
T ss_pred HHHHHHHHHHHCCCeEEEec---------------------------------CCceeEE--ecCCCCEEEEEeecccCC
Confidence 45688999999999876432 0011110 02344577777776553
Q ss_pred ---------------------CCCccccchHHHHHHHHHHhccCC-ccccceEEEeeCCCCCCchhHHHHHHhhc
Q 013160 174 ---------------------KGGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (448)
Q Consensus 174 ---------------------~~~~~~a~gval~LaLa~yl~r~~-~wAKDIIfv~~D~~~g~~~G~~AWL~aYH 226 (448)
.|..++.++++.++..++.+++.. -+.+||.|++.-+++.+..|++.++++..
T Consensus 92 ~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~~~~~~ 166 (466)
T TIGR01886 92 AGEGWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWVDMDYYFKHEE 166 (466)
T ss_pred CCCCCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcccHHHHHhcCc
Confidence 122444566777666666776654 46789999996334445679999998543
No 66
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=91.04 E-value=2.7 Score=44.85 Aligned_cols=98 Identities=15% Similarity=0.227 Sum_probs=62.0
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeecC
Q 013160 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~~ 173 (448)
+..+|+.++|+++|+++.... |+.++.+ .+.+...|+|..|.|..
T Consensus 35 ~~~~~l~~~~~~~g~~~~~~~---------------------------------~~~~~~~--~~~~~~~l~l~gH~D~V 79 (447)
T TIGR01887 35 KALDKFLELAKRDGFTTENVD---------------------------------NYAGYAE--YGQGEEYLGILGHLDVV 79 (447)
T ss_pred HHHHHHHHHHHHcCceEEEec---------------------------------CceEEEE--eCCCCCeEEEEeecCCC
Confidence 467899999999999865211 2222221 12334568887766532
Q ss_pred ----------------------CCCccccchHHHHHHHHHHhccCCc-cccceEEEeeCCCCCCchhHHHHHHhhc
Q 013160 174 ----------------------KGGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (448)
Q Consensus 174 ----------------------~~~~~~a~gval~LaLa~yl~r~~~-wAKDIIfv~~D~~~g~~~G~~AWL~aYH 226 (448)
.|..+..++++.++..++.|++... +..+|.|+++-+++.+..|++.+++..+
T Consensus 80 p~~~~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~ 155 (447)
T TIGR01887 80 PAGDGWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEE 155 (447)
T ss_pred CCCCCCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcC
Confidence 1223334567777777777776543 4579999997444555679999998643
No 67
>PRK06156 hypothetical protein; Provisional
Probab=89.47 E-value=9.2 Score=41.58 Aligned_cols=51 Identities=20% Similarity=0.245 Sum_probs=35.5
Q ss_pred cccchHHHHHHHHHHhccCC-ccccceEEEeeCCCCCCchhHHHHHHhhcCC
Q 013160 178 RETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRDYHTP 228 (448)
Q Consensus 178 ~~a~gval~LaLa~yl~r~~-~wAKDIIfv~~D~~~g~~~G~~AWL~aYH~~ 228 (448)
+.-.+++.++..++.+.+.. -+.++|.|+|+=+++.+..|++.|+++++.+
T Consensus 154 D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~~~~~ 205 (520)
T PRK06156 154 DDKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDPLKYYLERYTPP 205 (520)
T ss_pred cchHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchhHHHHHHhcCCC
Confidence 33467887766667776653 3557999999633444457999999988754
No 68
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=89.23 E-value=1.7 Score=45.92 Aligned_cols=76 Identities=16% Similarity=0.076 Sum_probs=49.9
Q ss_pred cceEEEEEcCCCCCCceeEEEEEEeecCCCCccccchHHHHHHHHHHhccCCccccceEEEeeCCCCCCchhHHHHHHhh
Q 013160 146 GINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDY 225 (448)
Q Consensus 146 G~NvygIlRAPRgdGtEAIVLvap~~~~~~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~~~g~~~G~~AWL~aY 225 (448)
|.=.||=+-= +|..+|-|+|+|+.-+-.-+.||.+|++++..||+++++.+-. -..=|||.- +-.|.-+||...
T Consensus 115 G~L~ygE~~i-pG~s~~EillsthiCHPsmANdnLSG~~v~~~La~~L~~~~~r-ytYRflf~P----eTIGsI~yLskn 188 (386)
T PF09940_consen 115 GSLTYGEFVI-PGESDEEILLSTHICHPSMANDNLSGPAVLTFLAKWLKQLPNR-YTYRFLFVP----ETIGSITYLSKN 188 (386)
T ss_dssp -EEEEEEEEE---SSS-EEEEEEE----S-TTTTHHHHHHHHHHHHHHTTS--S-SEEEEEEE-----TTHHHHHHHHH-
T ss_pred CceeEEEEEe-cCCCCCeEEEEEeccCcccccccccHHHHHHHHHHHHhcCCcC-ceEEEEEcc----ccHHHHHHHHHC
Confidence 3333443333 3699999999999876656677789999999999999988776 777788864 458999999965
Q ss_pred cC
Q 013160 226 HT 227 (448)
Q Consensus 226 H~ 227 (448)
.+
T Consensus 189 ~~ 190 (386)
T PF09940_consen 189 LD 190 (386)
T ss_dssp GG
T ss_pred HH
Confidence 43
No 69
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=88.10 E-value=3.2 Score=42.91 Aligned_cols=99 Identities=15% Similarity=0.107 Sum_probs=62.7
Q ss_pred chHHHHHHHHHhcCCcee-eeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeec
Q 013160 94 ESHGIIAKYMSNLGAQVN-NHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (448)
Q Consensus 94 ~~~~~l~~~l~~lGLev~-~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~ 172 (448)
+..+||.++|+++|.+-. .+ ..+.|+++.+.. +. ...|+|..++|.
T Consensus 17 ~~~~~i~~~l~~~g~~~~~~~------------------------------~~~~nvva~~~~--~~-~~~l~l~gH~Dt 63 (373)
T TIGR01900 17 PIADEIEAALNNLELEGLEVF------------------------------RFGDNVLARTDF--GK-ASRVILAGHIDT 63 (373)
T ss_pred HHHHHHHHHHhhccccCceEE------------------------------EECCEEEEecCC--CC-CCeEEEeCcccc
Confidence 578899999999875311 11 123489988643 22 235889777654
Q ss_pred CC----------------------------------CCccccchHHHHHHHHHHhcc---CCccccceEEEeeCCCCC--
Q 013160 173 VK----------------------------------GGVRETLSLGIAYSVFSLLTR---VTWLAKDIIWLVADSQYG-- 213 (448)
Q Consensus 173 ~~----------------------------------~~~~~a~gval~LaLa~yl~r---~~~wAKDIIfv~~D~~~g-- 213 (448)
.. |..+...|++.+++.++.+.+ ..-+..||.|+|+.+++.
T Consensus 64 Vp~~~~~~~~W~~~p~~~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~ 143 (373)
T TIGR01900 64 VPIADNFPPKWLEPGDSLIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAA 143 (373)
T ss_pred ccCCCCChhhhccCcccccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccC
Confidence 21 112334678888888887742 224678999999755442
Q ss_pred CchhHHHHHHhh
Q 013160 214 EYAPVAAWLRDY 225 (448)
Q Consensus 214 ~~~G~~AWL~aY 225 (448)
+..|++..++.+
T Consensus 144 ~~~G~~~~~~~~ 155 (373)
T TIGR01900 144 EKNGLGHIRDAH 155 (373)
T ss_pred CCCCHHHHHHhC
Confidence 235999998864
No 70
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=83.03 E-value=8.2 Score=39.64 Aligned_cols=102 Identities=15% Similarity=0.308 Sum_probs=65.9
Q ss_pred cchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEEeec
Q 013160 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (448)
Q Consensus 93 ~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPRgdGtEAIVLvap~~~ 172 (448)
...++||++.|+++|-.+..+.|+.. +| + + +..=.|+++-+.. ...+-.||..+||+
T Consensus 72 ~~vr~~i~~~l~~l~w~ve~~~f~~~----tp-----------~---g--~~~f~nii~tl~~---~A~r~lVlachyds 128 (338)
T KOG3946|consen 72 RQVRRFIIQHLRNLGWAVETDAFTDN----TP-----------L---G--TRNFNNLIATLDP---NASRYLVLACHYDS 128 (338)
T ss_pred HHHHHHHHHHHHhcCceeeecccccc----Cc-----------c---e--eeeeeeEEEecCC---Ccchheeeeccccc
Confidence 46799999999999998888887643 11 1 1 2333577777664 56789999999987
Q ss_pred CC-------CCccccchHHHHHHHHHHhccC--Cccc---cceEEEeeCCCCCCchhHHHH
Q 013160 173 VK-------GGVRETLSLGIAYSVFSLLTRV--TWLA---KDIIWLVADSQYGEYAPVAAW 221 (448)
Q Consensus 173 ~~-------~~~~~a~gval~LaLa~yl~r~--~~wA---KDIIfv~~D~~~g~~~G~~AW 221 (448)
.- ++.+.+-.-|+++-+|+.+.+. +--+ =.+.+||+|++ ++.+.|
T Consensus 129 k~~p~~~~vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGE----EAf~eW 185 (338)
T KOG3946|consen 129 KIFPGGMFVGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGE----EAFEEW 185 (338)
T ss_pred ccCCCcceEeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccH----HHHhhc
Confidence 52 2233233457777777666442 1222 24778999975 344555
No 71
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=82.78 E-value=17 Score=39.46 Aligned_cols=135 Identities=13% Similarity=0.133 Sum_probs=84.6
Q ss_pred HHHHHHHHHHhhhhcCCCCC-ccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEE
Q 013160 72 SEANKLIKELNNLHSNPLGA-TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTV 150 (448)
Q Consensus 72 ~~a~~y~~~l~~l~~~~~~~-~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~Nvy 150 (448)
..++++.-+|-.+.+-..+. .-..+++|...|.++ .|.|. ||-..+..| .+|. .+.-.||+
T Consensus 8 e~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~---pYFqe--------hped~~~~p-----i~nD--pygR~nv~ 69 (553)
T COG4187 8 ERVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGEL---PYFQE--------HPEDLWLQP-----IHND--PYGRRNVF 69 (553)
T ss_pred HHHHHHHHHHeeccccCCCcccccHHHHHHHHHhcC---chhhh--------ChHhhcccC-----CCCC--ccccceeE
Confidence 34666666666655433221 124678888777776 34333 222222211 1121 23457999
Q ss_pred EEEcCCCCCCceeEEEEEEeecCCC---------------------------------------------CccccchHHH
Q 013160 151 GIIRAPRGDGKEAIVLVTPYNAVKG---------------------------------------------GVRETLSLGI 185 (448)
Q Consensus 151 gIlRAPRgdGtEAIVLvap~~~~~~---------------------------------------------~~~~a~gval 185 (448)
|.+|. +.++-.+||..+||...- ..+=.+|+|.
T Consensus 70 AlVrg--~~~k~tvvl~gH~DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav 147 (553)
T COG4187 70 ALVRG--GTSKRTVVLHGHFDTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAV 147 (553)
T ss_pred EEEec--CCCCceEEEeeccceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHH
Confidence 99999 788899999999976411 1122367888
Q ss_pred HHHHHHHhccCCccccceEEEeeCCCCCCchhHHHHHHhhc
Q 013160 186 AYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (448)
Q Consensus 186 ~LaLa~yl~r~~~wAKDIIfv~~D~~~g~~~G~~AWL~aYH 226 (448)
.||..+.|....-..=|+.|+..-.++-++.||++=+.+--
T Consensus 148 ~la~L~~fa~~~~~~GNlLf~a~pdEE~~s~G~r~a~~~L~ 188 (553)
T COG4187 148 HLACLEEFAARTDRQGNLLFMAVPDEEVESRGMREARPALP 188 (553)
T ss_pred HHHHHHHHhhCCCCCCcEEEEeccchhhhcccHHHHHHHHH
Confidence 88877777776888899999985334456788887766543
No 72
>PRK08737 acetylornithine deacetylase; Provisional
Probab=79.29 E-value=26 Score=36.18 Aligned_cols=113 Identities=12% Similarity=0.073 Sum_probs=66.7
Q ss_pred HHHHHHHHHhhhhcCCCC---CccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceE
Q 013160 73 EANKLIKELNNLHSNPLG---ATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINT 149 (448)
Q Consensus 73 ~a~~y~~~l~~l~~~~~~---~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~Nv 149 (448)
.+.++.++|-+....+.. ...+..+|+.++|+ |+++...... ....|+
T Consensus 7 ~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~~---------------------------~~~~nl 57 (364)
T PRK08737 7 STLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDHG---------------------------AGAVSL 57 (364)
T ss_pred HHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecCC---------------------------CCceEE
Confidence 355666676666554211 12356789999996 8876543210 112588
Q ss_pred EEEEcCCCCCCceeEEEEEEeecCC----------------------CCccccchHHHHHHHHHHhccCCccccceEEEe
Q 013160 150 VGIIRAPRGDGKEAIVLVTPYNAVK----------------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLV 207 (448)
Q Consensus 150 ygIlRAPRgdGtEAIVLvap~~~~~----------------------~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv~ 207 (448)
++.. + ...++|..|.|... |..|-..+++.+++.++.+ -.||.|++
T Consensus 58 i~~~----g--~~~lll~gH~DtVp~~~~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~~------~~~v~~~~ 125 (364)
T PRK08737 58 YAVR----G--TPKYLFNVHLDTVPDSPHWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANAG------DGDAAFLF 125 (364)
T ss_pred EEEc----C--CCeEEEEeeeCCCCCCCCCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHcc------CCCEEEEE
Confidence 8752 2 24699998887631 1122235677776665532 36899999
Q ss_pred eCCCC-CCchhHHHHHHhhc
Q 013160 208 ADSQY-GEYAPVAAWLRDYH 226 (448)
Q Consensus 208 ~D~~~-g~~~G~~AWL~aYH 226 (448)
+-+++ +...|++.++++..
T Consensus 126 ~~dEE~g~~~g~~~~~~~~~ 145 (364)
T PRK08737 126 SSDEEANDPRCVAAFLARGI 145 (364)
T ss_pred EcccccCchhhHHHHHHhCC
Confidence 74444 33468899988643
No 73
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=78.35 E-value=8.5 Score=34.70 Aligned_cols=147 Identities=13% Similarity=0.060 Sum_probs=86.1
Q ss_pred CCCccccchHHHHHHHHHHhc-cCCccccceEEEeeCCCCCCch-hHHHHHHh--hcCCCCCCCCCCcccccccCCCCcc
Q 013160 174 KGGVRETLSLGIAYSVFSLLT-RVTWLAKDIIWLVADSQYGEYA-PVAAWLRD--YHTPAFSNLDSLNTETCHVGNNNFE 249 (448)
Q Consensus 174 ~~~~~~a~gval~LaLa~yl~-r~~~wAKDIIfv~~D~~~g~~~-G~~AWL~a--YH~~~~~~~~~~~~~~~~~~~~~~~ 249 (448)
.|..+...+++.+++.++.++ ...-+..+|+|+|+=+++.+.. |++.++++ +...
T Consensus 32 rG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~~~l~~~~~~~~~--------------------- 90 (189)
T PF01546_consen 32 RGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGAKHLLEEGAFFGL--------------------- 90 (189)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHHHHHHHHCEEEEE---------------------
T ss_pred CCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchhhhhhhhcccccc---------------------
Confidence 355555678888888888776 5677779999999744444445 99999998 2221
Q ss_pred ccccccccchhhhheeeEEeecCCCCCcceEEEEEeecCCCCCChhHHHHHHHHHhhccCccccccccccccchhhhhhh
Q 013160 250 SKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFHWLLNSKWVKSL 329 (448)
Q Consensus 250 ~~~~~~~~RaGsIqAAlvLe~~~~~~~~d~l~I~~EG~NGqLPNLDLiN~v~~la~~~~G~~v~l~~~~~~~~~~wl~~l 329 (448)
+ +...++.|.... +.+. ..++-.++..+...+....+.+.....+..-.|..|+..
T Consensus 91 --------~---~~~~~~~e~~~~----~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tD~~~~~~- 146 (189)
T PF01546_consen 91 --------H---PDYVIIGEPTGK----GGVG--------SDNDPPLVQALQAAAQEVGGEPPEPVASGGGTDAGFLAE- 146 (189)
T ss_dssp --------E---ESEEEECECETT----SEEE--------HCTCHHHHHHHHHHHHHTTSSEEEEEEESSSSTHHHHHC-
T ss_pred --------c---cccccccccccc----cccc--------ccccHHHHHHHHHHHHHHhhccccccceeccccchhhhh-
Confidence 0 233444444322 1111 333444888888777654443566666666777777553
Q ss_pred HHH--HHH--Hh---hhhhhhCCCcccCCChhhHHHHHHHHHHHHhh
Q 013160 330 GEV--FES--LG---KMVKTLNPDWKLGISAADYVEGAATLASSLYH 369 (448)
Q Consensus 330 ~~~--~~~--i~---k~~~~~~~~~~~~~~~~~y~~~~~~l~~s~~~ 369 (448)
... +.. +| ..+| . ..-.+..++++.+++.+++-+.|
T Consensus 147 ~~~~~~~~i~~G~~~~~~H--~--~~E~i~~~~l~~~~~~~~~~l~n 189 (189)
T PF01546_consen 147 VKGLGIPAIGFGPGGSNAH--T--PDEYIDIEDLVKGAKIYAALLEN 189 (189)
T ss_dssp HHHTTEEEEEEESCEESTT--S--TT-EEEHHHHHHHHHHHHHHHHT
T ss_pred hhccccceeeeCCCCCCCC--C--CCcEecHHHHHHHHHHHHHHHhC
Confidence 100 000 00 0111 1 12236778888888888887765
No 74
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=69.96 E-value=54 Score=35.31 Aligned_cols=118 Identities=16% Similarity=0.168 Sum_probs=70.8
Q ss_pred HHHHHHhhhhcCCCCCcc-chHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEc
Q 013160 76 KLIKELNNLHSNPLGATT-ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIR 154 (448)
Q Consensus 76 ~y~~~l~~l~~~~~~~~~-~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlR 154 (448)
+|++.++-..-.+..... .+++++.++.+++|+.+..-+.. .| .|.++=
T Consensus 30 ~f~eylRi~Tv~p~~dy~~a~~~Fl~~~a~~l~l~~~~i~~~----------------------------p~--~~~~l~ 79 (420)
T KOG2275|consen 30 RFREYLRIPTVQPNPDYTIACADFLKKYAKSLGLTVQKIESE----------------------------PG--KYVLLY 79 (420)
T ss_pred HHHHHhhccccccCCCccHHHHHHHHHHHHhcCCceeEEEec----------------------------Cc--eeEEEE
Confidence 444444333333333334 68999999999999987322211 11 233333
Q ss_pred CCCC-C-CceeEEEEEEeecC------------------------CCC-ccccchHHHHHHHHHHhccCCccccceEEEe
Q 013160 155 APRG-D-GKEAIVLVTPYNAV------------------------KGG-VRETLSLGIAYSVFSLLTRVTWLAKDIIWLV 207 (448)
Q Consensus 155 APRg-d-GtEAIVLvap~~~~------------------------~~~-~~~a~gval~LaLa~yl~r~~~wAKDIIfv~ 207 (448)
.=+| | .--+|+|.++.|-. +|+ ++-..+++.+=|+-..+.+--=|.|+|..+|
T Consensus 80 T~~GS~P~L~silL~SH~DVVP~f~e~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsf 159 (420)
T KOG2275|consen 80 TWLGSDPELPSILLNSHTDVVPVFREKWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSF 159 (420)
T ss_pred EeeCCCCCccceeeeccccccCCCcccCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEe
Confidence 3222 2 45688998865431 111 1112456666666666655444889999999
Q ss_pred -eCCCCCCchhHHHHHH
Q 013160 208 -ADSQYGEYAPVAAWLR 223 (448)
Q Consensus 208 -~D~~~g~~~G~~AWL~ 223 (448)
+|.+.++..||+-+.+
T Consensus 160 vpDEEi~G~~Gm~~fa~ 176 (420)
T KOG2275|consen 160 VPDEEIGGHIGMKEFAK 176 (420)
T ss_pred cCchhccCcchHHHHhh
Confidence 5877788999999998
No 75
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=65.71 E-value=21 Score=36.24 Aligned_cols=102 Identities=14% Similarity=0.175 Sum_probs=64.6
Q ss_pred cccchHHHHHHHHHHhccCCccccceEEEeeCCCCCCchhHHHHHHhhcCCCCCCCCCCcccccccCCCCcccccccccc
Q 013160 178 RETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIR 257 (448)
Q Consensus 178 ~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~~~g~~~G~~AWL~aYH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (448)
+|..|+++++.+++.+++...- .|+.|+|+=.++-+..|.+.-..+. .|.
T Consensus 134 DdR~g~~~lle~l~~l~~~~~~-~~v~~v~tvqEEvG~rGA~~aa~~i-~PD---------------------------- 183 (292)
T PF05343_consen 134 DDRAGCAVLLELLRELKEKELD-VDVYFVFTVQEEVGLRGAKTAAFRI-KPD---------------------------- 183 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTSS-S-SEEEEEEESSCTTTSHHHHHHHHHH--CS----------------------------
T ss_pred CchhHHHHHHHHHHHHhhcCCC-ceEEEEEEeeeeecCcceeeccccc-CCC----------------------------
Confidence 3467999999999999987555 9999999966655666666443332 221
Q ss_pred chhhhheeeEEeecCCCC--Ccce--------EEEEEeecCCCCCChhHHHHHHHHHhhccCcccccccc
Q 013160 258 RSGTMAAALVLGVAYGNE--NEDT--------LGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQF 317 (448)
Q Consensus 258 RaGsIqAAlvLe~~~~~~--~~d~--------l~I~~EG~NGqLPNLDLiN~v~~la~~~~G~~v~l~~~ 317 (448)
.||++|.....+ ..+. ..|. -+-.+.+||-+|.+-+..+|+. .|+++..+-+
T Consensus 184 ------~ai~vD~~~a~d~~~~~~~~~~lG~Gp~i~-~~D~~~i~~~~l~~~l~~~A~~-~~Ip~Q~~~~ 245 (292)
T PF05343_consen 184 ------IAIAVDVTPAGDTPGSDEKEQGLGKGPVIR-VGDSSMIPNPKLVDKLREIAEE-NGIPYQREVF 245 (292)
T ss_dssp ------EEEEEEEEEESSSTTSTTTTSCTTS-EEEE-EEETTEESHHHHHHHHHHHHHH-TT--EEEEEE
T ss_pred ------EEEEEeeeccCCCCCCchhhccCCCCcEEE-EccCCCCCCHHHHHHHHHHHHH-cCCCeEEEec
Confidence 345555543322 1111 1122 3444589999999999999975 5799887633
No 76
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=62.97 E-value=1e+02 Score=32.86 Aligned_cols=118 Identities=16% Similarity=0.147 Sum_probs=72.2
Q ss_pred HHHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEE
Q 013160 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (448)
Q Consensus 74 a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIl 153 (448)
..+++++|.....-+.++. .-.+||.+.|+++|.++... ...++-+.|.+
T Consensus 14 l~~~rr~lH~~PEL~f~E~-~Ta~~i~~~L~~~g~~~~~~-----------------------------~~~~TGvva~~ 63 (392)
T COG1473 14 LIEWRRDLHEHPELGFEEY-RTAAYIAEKLEELGFEVVEV-----------------------------GGGKTGVVATL 63 (392)
T ss_pred HHHHHHHHhhCCccchhHH-HHHHHHHHHHHHcCCeeEec-----------------------------cCCceEEEEEE
Confidence 4455566655444333322 35789999999999983211 01246678888
Q ss_pred cCCCCCCceeEEEEEEeecC-------------CCCccc----cchHHHHHHHHHHhccC-CccccceEEEeeCCCCCCc
Q 013160 154 RAPRGDGKEAIVLVTPYNAV-------------KGGVRE----TLSLGIAYSVFSLLTRV-TWLAKDIIWLVADSQYGEY 215 (448)
Q Consensus 154 RAPRgdGtEAIVLvap~~~~-------------~~~~~~----a~gval~LaLa~yl~r~-~~wAKDIIfv~~D~~~g~~ 215 (448)
+... +|. .|.|=+-+|-- +.+..- ..-.+.+|+.|++|++. .-+.-.+.|+|--++++..
T Consensus 64 ~~g~-~g~-tIalRAD~DALPi~E~t~~~~~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~ 141 (392)
T COG1473 64 KGGK-PGP-TIALRADMDALPIQEETGLPFASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGG 141 (392)
T ss_pred cCCC-CCC-EEEEEeecccCccccccCCCcccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccc
Confidence 8643 333 88888866532 111000 12356778888888887 6788999999976655432
Q ss_pred hhHHHHHHh
Q 013160 216 APVAAWLRD 224 (448)
Q Consensus 216 ~G~~AWL~a 224 (448)
|.+.-+++
T Consensus 142 -Ga~~mi~~ 149 (392)
T COG1473 142 -GAKAMIED 149 (392)
T ss_pred -cHHHHHhc
Confidence 66666554
No 77
>PRK09961 exoaminopeptidase; Provisional
Probab=57.15 E-value=53 Score=34.10 Aligned_cols=104 Identities=15% Similarity=0.171 Sum_probs=67.3
Q ss_pred ccccchHHHHHHHHHHhccCCccccceEEEeeCCCCCCchhHHHHHHhhcCCCCCCCCCCcccccccCCCCccccccccc
Q 013160 177 VRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGI 256 (448)
Q Consensus 177 ~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~~~g~~~G~~AWL~aYH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (448)
.+|..|++.++.+++.+++.. ...|++|+++..++-+..|.+.-.... .|.
T Consensus 165 lDnR~g~~~lle~l~~l~~~~-~~~~v~~~~tvqEEvG~rGa~~aa~~i-~pd--------------------------- 215 (344)
T PRK09961 165 FDDRLGCYLLVTLLRELHDAE-LPAEVWLVASSSEEVGLRGGQTATRAV-SPD--------------------------- 215 (344)
T ss_pred chhhHhHHHHHHHHHHhhhcC-CCceEEEEEEcccccchHHHHHHHhcc-CCC---------------------------
Confidence 455789999999999887654 578999999998876777776653322 111
Q ss_pred cchhhhheeeEEeecCCCCCcce-----------EEEEEeecCCCCCChhHHHHHHHHHhhccCccccccccc
Q 013160 257 RRSGTMAAALVLGVAYGNENEDT-----------LGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFH 318 (448)
Q Consensus 257 ~RaGsIqAAlvLe~~~~~~~~d~-----------l~I~~EG~NGqLPNLDLiN~v~~la~~~~G~~v~l~~~~ 318 (448)
.||++|+....+..+. .-|..- -.|.++|-.++..+..+|+. .|+++.+..+.
T Consensus 216 -------~~I~vDv~~~~d~~~~~~~~~~~lg~Gp~i~~~-D~~~i~~~~l~~~l~~~A~~-~~Ip~Q~~~~~ 279 (344)
T PRK09961 216 -------VAIVLDTACWAKNFDYGAANHRQIGNGPMLVLS-DKSLIAPPKLTAWIETVAAE-IGIPLQADMFS 279 (344)
T ss_pred -------EEEEEeccCCCCCCCCCCCcccccCCCceEEEc-cCCcCCCHHHHHHHHHHHHH-cCCCcEEEecC
Confidence 2566665433221110 111111 23889999999999999975 46887764443
No 78
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=48.46 E-value=73 Score=33.16 Aligned_cols=66 Identities=12% Similarity=0.093 Sum_probs=44.6
Q ss_pred HHHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEE
Q 013160 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (448)
Q Consensus 74 a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIl 153 (448)
..++.++|-+...-+..+ .+.+++|.++|+++|.++...+ --|++|.+
T Consensus 5 ~~~lLk~Lv~~~s~SG~E-~~V~~~l~~~l~~~g~ev~~D~-------------------------------~Gnlia~~ 52 (343)
T TIGR03106 5 LTETLLALLAIPSPTGFT-DAVVRYVAERLEDLGIEYELTR-------------------------------RGAIRATL 52 (343)
T ss_pred HHHHHHHHhcCCCCCCCH-HHHHHHHHHHHHHcCCeEEECC-------------------------------CeEEEEEE
Confidence 445566776666544333 4789999999999999875321 23789987
Q ss_pred cCCCCCCceeEEEEEEeecC
Q 013160 154 RAPRGDGKEAIVLVTPYNAV 173 (448)
Q Consensus 154 RAPRgdGtEAIVLvap~~~~ 173 (448)
+.. .+...++|++|.|..
T Consensus 53 ~g~--~~~~~v~l~aHmDev 70 (343)
T TIGR03106 53 PGR--EATPARAVVTHLDTL 70 (343)
T ss_pred CCC--CCCCeEEEEEeeccc
Confidence 552 223479999988764
No 79
>PRK09864 putative peptidase; Provisional
Probab=45.33 E-value=1.3e+02 Score=31.68 Aligned_cols=101 Identities=13% Similarity=0.191 Sum_probs=65.0
Q ss_pred ccccchHHHHHHHHHHhccCCccccceEEEeeCCCCCCchhHHHHHHhhcCCCCCCCCCCcccccccCCCCccccccccc
Q 013160 177 VRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGI 256 (448)
Q Consensus 177 ~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~~~g~~~G~~AWL~aYH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (448)
.+|..|+++++.+++.++. ...|+.|+|+=.++-+..|.+. .+|.=.+ +
T Consensus 174 lDnR~g~~~lle~l~~l~~---~~~~vy~v~TvQEEvGlrGA~~--aa~~i~P------------------------D-- 222 (356)
T PRK09864 174 LDNRIGCAMMAELLQTVNN---PEITLYGVGSVEEEVGLRGAQT--SAEHIKP------------------------D-- 222 (356)
T ss_pred CccHHHHHHHHHHHHHhhc---CCCeEEEEEEcchhcchHHHHH--HHhcCCC------------------------C--
Confidence 4456799999999999976 6689999999665445555543 3332211 1
Q ss_pred cchhhhheeeEEeecCCCCCc--ce----E------EE-EEeecCCCCCChhHHHHHHHHHhhccCccccccccc
Q 013160 257 RRSGTMAAALVLGVAYGNENE--DT----L------GI-YAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFH 318 (448)
Q Consensus 257 ~RaGsIqAAlvLe~~~~~~~~--d~----l------~I-~~EG~NGqLPNLDLiN~v~~la~~~~G~~v~l~~~~ 318 (448)
.||++|+....+.+ .. + -| .++ .|-++|-.|.+-+..+|+. .|+++.+.-.+
T Consensus 223 -------iaIavDvt~~~d~p~~~~~~~~~~lG~Gp~i~~~D--~~~i~~~~l~~~l~~~A~~-~~Ip~Q~~~~~ 287 (356)
T PRK09864 223 -------VVIVLDTAVAGDVPGIDNIKYPLKLGQGPGLMLFD--KRYFPNQKLVAALKSCAAH-NDLPLQFSTMK 287 (356)
T ss_pred -------EEEEEecccCCCCCCCcccccccccCCCCeEEEcc--CCccCCHHHHHHHHHHHHH-cCCCceEEEcC
Confidence 26777765433211 11 1 11 222 3999999999999999975 57887765443
No 80
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=42.96 E-value=1.5e+02 Score=31.09 Aligned_cols=100 Identities=6% Similarity=-0.040 Sum_probs=66.1
Q ss_pred ccccchHHHHHHHHHHhccCCccccceEEEeeCCCCCCchhHHHHHHhhcCCCCCCCCCCcccccccCCCCccccccccc
Q 013160 177 VRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGI 256 (448)
Q Consensus 177 ~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~~~g~~~G~~AWL~aYH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (448)
.+|..|+++++.+++.+++.+ ...|+.|+|+=.++-+..|.+. .+|+-.+ +
T Consensus 177 lDdR~g~a~l~e~l~~l~~~~-~~~~l~~~~tvqEEvG~rGA~~--aa~~i~p------------------------D-- 227 (350)
T TIGR03107 177 WDNRYGVLMILELLESLKDQE-LPNTLIAGANVQEEVGLRGAHV--STTKFNP------------------------D-- 227 (350)
T ss_pred cccHHHHHHHHHHHHHhhhcC-CCceEEEEEEChhhcCchhhhh--HHhhCCC------------------------C--
Confidence 455789999999999998765 4589999998655545566653 4554321 1
Q ss_pred cchhhhheeeEEeecCCCCCcc--------eEEEEEeecCCCCCChhHHHHHHHHHhhccCccccc
Q 013160 257 RRSGTMAAALVLGVAYGNENED--------TLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKV 314 (448)
Q Consensus 257 ~RaGsIqAAlvLe~~~~~~~~d--------~l~I~~EG~NGqLPNLDLiN~v~~la~~~~G~~v~l 314 (448)
.||++|+....+.++ -.-|. -.-.|-.+|-.|.+-+..+|+. .|+++..
T Consensus 228 -------~aI~vDv~~~~d~~~~~~~~lg~Gp~i~-~~D~~~i~~~~l~~~l~~~A~~-~~I~~Q~ 284 (350)
T TIGR03107 228 -------IFFAVDCSPAGDIYGDQGGKLGEGTLLR-FFDPGHIMLPRMKDFLLTTAEE-AGIKYQY 284 (350)
T ss_pred -------EEEEEecCCcCCCCCCCccccCCCceEE-EecCCCCCCHHHHHHHHHHHHH-cCCCcEE
Confidence 466666654433111 11221 1124899999999999999975 5788876
No 81
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=36.16 E-value=1e+02 Score=32.23 Aligned_cols=63 Identities=16% Similarity=0.163 Sum_probs=41.3
Q ss_pred HHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCCC
Q 013160 78 IKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPR 157 (448)
Q Consensus 78 ~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAPR 157 (448)
.++|-+...-+..+ .+.++++.++|++++.++.+-+ =-|++|+.+...
T Consensus 4 L~~L~~~~gpSG~E-~~v~~~i~~~l~~~~~~v~~D~-------------------------------~GNvia~~~g~~ 51 (350)
T TIGR03107 4 IKEVTELQGTSGFE-HPIRDYLRQDITPLVDQVETDG-------------------------------LGGIFGIKESQV 51 (350)
T ss_pred HHHHHhCCCCCCCc-HHHHHHHHHHHHhhCCEEEECC-------------------------------CCCEEEEecCCC
Confidence 45555555444333 5789999999999998765332 137899865421
Q ss_pred CCCceeEEEEEEeecC
Q 013160 158 GDGKEAIVLVTPYNAV 173 (448)
Q Consensus 158 gdGtEAIVLvap~~~~ 173 (448)
..+. .|+|.+|.|..
T Consensus 52 ~~~~-~vml~AHmDeV 66 (350)
T TIGR03107 52 ENAP-RVMVAAHMDEV 66 (350)
T ss_pred CCCC-EEEEEecccEe
Confidence 2233 79999988764
No 82
>PRK09961 exoaminopeptidase; Provisional
Probab=35.59 E-value=1e+02 Score=31.93 Aligned_cols=62 Identities=15% Similarity=0.188 Sum_probs=41.9
Q ss_pred HHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCC
Q 013160 77 LIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAP 156 (448)
Q Consensus 77 y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAP 156 (448)
+.++|-+...-+..+ .+.++++.++|+++|.++..-+ . -|+++.++.
T Consensus 5 ~L~~L~~~~s~sG~E-~~v~~~i~~~l~~~~~~v~~D~------------------------------~-Gnvi~~~~g- 51 (344)
T PRK09961 5 LLKALSEADAIASSE-QEVRQILLEEADRLQKEVRFDG------------------------------L-GSVLIRLNE- 51 (344)
T ss_pred HHHHHHhCCCCCCCh-HHHHHHHHHHHHhhCCEEEECC------------------------------C-CCEEEEEcC-
Confidence 456666655544433 4789999999999998865311 1 278888765
Q ss_pred CCCCceeEEEEEEeecC
Q 013160 157 RGDGKEAIVLVTPYNAV 173 (448)
Q Consensus 157 RgdGtEAIVLvap~~~~ 173 (448)
+ .+. .++|.+|.|.-
T Consensus 52 ~-~~~-~v~l~aHmDev 66 (344)
T PRK09961 52 S-TGP-KVMICAHMDEV 66 (344)
T ss_pred C-CCC-EEEEEecccee
Confidence 2 223 79999988774
No 83
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=28.58 E-value=1.6e+02 Score=31.05 Aligned_cols=65 Identities=15% Similarity=0.187 Sum_probs=45.7
Q ss_pred HHHHHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEE
Q 013160 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (448)
Q Consensus 74 a~~y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIl 153 (448)
...+.++|.....-+.-+ .+.++++.++|++++-|+.+-+ =-|+++..
T Consensus 4 ~~~~LkeL~~~~gpsG~E-~eVr~~~~~el~~~~~ev~~D~-------------------------------lGnlia~~ 51 (355)
T COG1363 4 LLELLKELLEAPGPSGYE-EEVRDVLKEELEPLGDEVEVDR-------------------------------LGNLIAKK 51 (355)
T ss_pred HHHHHHHHHcCCCCCCcH-HHHHHHHHHHHHHhCCceEEcC-------------------------------CCcEEEEe
Confidence 345677777766544433 5789999999999999875322 12778888
Q ss_pred cCCCCCCceeEEEEEEeec
Q 013160 154 RAPRGDGKEAIVLVTPYNA 172 (448)
Q Consensus 154 RAPRgdGtEAIVLvap~~~ 172 (448)
++ .+|...+.+++|.|.
T Consensus 52 ~g--~~g~~~imi~AHmDE 68 (355)
T COG1363 52 GG--KNGPPKVMIAAHMDE 68 (355)
T ss_pred cC--CCCCccEEEEeecce
Confidence 87 367677888887654
No 84
>PF10096 DUF2334: Uncharacterized protein conserved in bacteria (DUF2334); InterPro: IPR018763 This group of proteins has no known function.
Probab=28.57 E-value=26 Score=34.56 Aligned_cols=29 Identities=38% Similarity=0.347 Sum_probs=24.2
Q ss_pred hhccceehhhhhhhhhhhcccee--EEeeeeeceeeeh
Q 013160 370 QVVFSLVVKLIVLHLALSLTHTH--TVSGEVGLCWQCV 405 (448)
Q Consensus 370 QalG~~~~~~~~~h~~~~~~h~~--~~~~~~~~~~~~~ 405 (448)
|+.|-- +++|| .+|++ +++|+-.-+|..+
T Consensus 65 ~~~Gg~----I~lHG---YtHq~~~~~sg~~~ef~~~~ 95 (243)
T PF10096_consen 65 QARGGE----IVLHG---YTHQYGNSVSGDGFEFWDSE 95 (243)
T ss_pred HhcCCE----EEEEe---cceecCCCcccccceecccc
Confidence 778888 88999 89999 6888888888743
No 85
>COG4310 Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain [General function prediction only]
Probab=27.98 E-value=1.1e+02 Score=32.17 Aligned_cols=65 Identities=18% Similarity=0.159 Sum_probs=44.5
Q ss_pred CCCCceeEEEEEEeecCCCCccccchHHHHHHHHHHhccCCccccceEEEeeCCCCCCchhHHHHHHhhc
Q 013160 157 RGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (448)
Q Consensus 157 RgdGtEAIVLvap~~~~~~~~~~a~gval~LaLa~yl~r~~~wAKDIIfv~~D~~~g~~~G~~AWL~aYH 226 (448)
||..++-|+|+|..=+..-+.+|-+|+|++.-||+-++.-+-- -.-=|||.- +-.|.-+||..--
T Consensus 174 rg~~~~eiLlst~lCHPSmaNdn~SG~all~~lak~l~~~ktr-ysYRfvf~P----~TiGsi~wLsrne 238 (435)
T COG4310 174 RGTSKDEILLSTYLCHPSMANDNLSGLALLTFLAKALKSLKTR-YSYRFVFAP----ETIGSIVWLSRNE 238 (435)
T ss_pred cCCccceeeeeecccChhhccCccchHHHHHHHHHHHHhccce-eeEEEEecc----cccchhhhHhcch
Confidence 4578888999998755444455678999988888877554311 234578864 3478899998653
No 86
>PF12357 PLD_C: Phospholipase D C terminal ; InterPro: IPR024632 Phospholipase D (PLD) catalyses the hydrolysis of the phosphodiester bond of glycerophospholipids to generate phosphatidic acid and a free head group. Phospholipase D activities have been detected in simple to complex organisms from viruses and bacteria to yeast, plants, and mammals []. In higher organisms, PLD specifically catalyzes the hydrolysis of phosphatidylcholine (PC) to phosphatidic acid (PA) and choline and is activated in response to stimulators of vesicle transport, endocytosis, exocytosis, cell migration, and mitosis. This entry represents the C-terminal domain of eukaryotic phospholipase D. The domain is approximately 70 amino acids in length and contains a conserved FPD sequence motif.
Probab=27.28 E-value=47 Score=27.53 Aligned_cols=44 Identities=20% Similarity=0.141 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHHHhhhhccceehhhhhhhhhhhccceeEEeeeeec
Q 013160 355 DYVEGAATLASSLYHQVVFSLVVKLIVLHLALSLTHTHTVSGEVGL 400 (448)
Q Consensus 355 ~y~~~~~~l~~s~~~QalG~~~~~~~~~h~~~~~~h~~~~~~~~~~ 400 (448)
+=|.++..||.-.|.|..+.-++.|.| ||.-|++. -+-.|+|.-
T Consensus 12 eCVr~Vn~iae~nW~~y~~ee~~dl~G-HLl~YPv~-V~~dG~V~~ 55 (74)
T PF12357_consen 12 ECVRRVNEIAEENWKQYASEEVTDLPG-HLLKYPVQ-VDRDGKVTP 55 (74)
T ss_pred HHHHHHHHHHHHHHHHhhccccccCCC-ccccCCeE-EcCCCCEee
Confidence 667899999999999999999999999 99888874 334577654
No 87
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=24.99 E-value=3.7e+02 Score=27.96 Aligned_cols=103 Identities=11% Similarity=0.084 Sum_probs=60.4
Q ss_pred ccccchHHHHHHHHHHhccCCc-cccceEEEeeCCCCCCchhHHHHHHhhcCCCCCCCCCCcccccccCCCCcccccccc
Q 013160 177 VRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYG 255 (448)
Q Consensus 177 ~~~a~gval~LaLa~yl~r~~~-wAKDIIfv~~D~~~g~~~G~~AWL~aYH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (448)
.++..|++.++.+++.+++..+ ..+++.|+|+=.++-+ .| .++.-. ++
T Consensus 182 ~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG-~g-----aa~~i~------------------------pd- 230 (343)
T TIGR03106 182 LDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVG-SG-----ASHALP------------------------PD- 230 (343)
T ss_pred cccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccC-cc-----chhccc------------------------Hh-
Confidence 4556899999999999987654 5689999998443322 23 112110 00
Q ss_pred ccchhhhheeeEEeecCCCCCcceE----EEEEeecCCCCCChhHHHHHHHHHhhccCccccccccc
Q 013160 256 IRRSGTMAAALVLGVAYGNENEDTL----GIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFH 318 (448)
Q Consensus 256 ~~RaGsIqAAlvLe~~~~~~~~d~l----~I~~EG~NGqLPNLDLiN~v~~la~~~~G~~v~l~~~~ 318 (448)
+.-+|++|..........+ .|. -.-.|-.+|-.|.+-+..+|+. .|++...+-++
T Consensus 231 ------~a~~i~vd~~~~~p~~~~lg~Gp~i~-~~d~~~~~~~~l~~~l~~~A~~-~~Ip~Q~~~~~ 289 (343)
T TIGR03106 231 ------VAELVSVDNGTVAPGQNSSEHGVTIA-MADSSGPFDYHLTRKLIRLCQD-HGIPHRRDVFR 289 (343)
T ss_pred ------hhccEEEEecccCCCCCcCCCCceEE-EecCCCCCCHHHHHHHHHHHHH-cCCCcEEEecC
Confidence 1123555544321110011 121 1234888999999999999964 57887765554
No 88
>PF15027 DUF4525: Domain of unknown function (DUF4525)
Probab=24.30 E-value=1.1e+02 Score=27.93 Aligned_cols=57 Identities=18% Similarity=0.223 Sum_probs=39.0
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCcceeeccCCCC-cceeeecCchhHHHHHHHHHHHhhhhcCCCC
Q 013160 26 VLVSVICCTAGVFGLLLLPVLAKNTYISENALMP-GSASSMLSNQEVSEANKLIKELNNLHSNPLG 90 (448)
Q Consensus 26 ~~lS~ll~l~GI~wll~LP~l~r~TYISENALlP-G~v~s~f~~~d~~~a~~y~~~l~~l~~~~~~ 90 (448)
..+|+++.+.|++|-++|--+. +.+ | .+...+.+++-.+-.++|.+++.+......+
T Consensus 10 qkl~~~Lv~fGfiWGlmLLh~t----~qq----~~~~ss~~LR~QILdLSkrYVKaLAeEn~~~~d 67 (138)
T PF15027_consen 10 QKLGFLLVVFGFIWGLMLLHYT----FQQ----PRHQSSAELREQILDLSKRYVKALAEENKNVVD 67 (138)
T ss_pred hhhHHHHHHHHHHHHHHHHHhe----ecC----CCccChHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 4689999999999998875321 000 1 1233456777777789999999887766433
No 89
>PHA02673 ORF109 EEV glycoprotein; Provisional
Probab=24.21 E-value=68 Score=30.25 Aligned_cols=38 Identities=24% Similarity=0.296 Sum_probs=28.1
Q ss_pred cccccchHHHHHHHHHHhchhhHHHHHHHHHHHHHhccc
Q 013160 7 SKKRKRPIVRLAVLLLSHSVLVSVICCTAGVFGLLLLPV 45 (448)
Q Consensus 7 ~~~~~r~i~rl~~~l~~~~~~lS~ll~l~GI~wll~LP~ 45 (448)
..+|.+.+.|...+++|....+|+ +.++.|+.+|.|-.
T Consensus 21 s~~r~k~~~R~i~l~~Ri~~~iSI-isL~~l~v~LaL~l 58 (161)
T PHA02673 21 SVKRQKAIRRYIKLFFRLMAAIAI-IVLAILVVILALAL 58 (161)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 467888888888888888888885 55666666666643
No 90
>COG2361 Uncharacterized conserved protein [Function unknown]
Probab=21.66 E-value=1.4e+02 Score=26.80 Aligned_cols=65 Identities=11% Similarity=0.144 Sum_probs=44.0
Q ss_pred hHHHHHHHHHhhccCcccccccccc---ccchhhhhhhHHHHHHHhhhhhhhCCC--cccCCChhhHHHHHHHHHHH
Q 013160 295 DLINIVHYLAVHRQGLRVKVEQFHW---LLNSKWVKSLGEVFESLGKMVKTLNPD--WKLGISAADYVEGAATLASS 366 (448)
Q Consensus 295 DLiN~v~~la~~~~G~~v~l~~~~~---~~~~~wl~~l~~~~~~i~k~~~~~~~~--~~~~~~~~~y~~~~~~l~~s 366 (448)
|+++.+-+|.+...++...=..... .--..-|..+||..-.|++-.|+.+|+ | .++.|+|+.+-+
T Consensus 12 diL~a~~~i~~yT~~~d~~~F~~~~~~~dAvir~L~iIGEa~k~ip~~~re~~p~vPW-------~~magmRd~liH 81 (117)
T COG2361 12 DILQAAERIEEYTKDMDYEEFIADKLTQDAVIRNLEIIGEATKRIPKSFREKYPEVPW-------KEMAGMRDKLIH 81 (117)
T ss_pred HHHHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHHHHHHhhcCHHHHHHCCCCCH-------HHHHHHHHHHHh
Confidence 6778887777766655433111111 111233778999999999999999999 8 667788877654
No 91
>PLN02594 phosphatidate cytidylyltransferase
Probab=21.46 E-value=1.1e+02 Score=32.37 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=26.0
Q ss_pred ccchHHHHHHHHHHhchhhHHHHHHHHHHHHHhc
Q 013160 10 RKRPIVRLAVLLLSHSVLVSVICCTAGVFGLLLL 43 (448)
Q Consensus 10 ~~r~i~rl~~~l~~~~~~lS~ll~l~GI~wll~L 43 (448)
+.+.+..+...+++|+..+|+.+|++|++|+++-
T Consensus 53 ~~~~l~~~~~~~~~~h~~isf~ly~~gfv~Fvls 86 (342)
T PLN02594 53 SDKFLYRLVSGLIKYHMAICYSLYIAGFVWFILT 86 (342)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444568999999999999999998764
No 92
>PRK09864 putative peptidase; Provisional
Probab=20.09 E-value=2.7e+02 Score=29.29 Aligned_cols=61 Identities=13% Similarity=0.107 Sum_probs=41.0
Q ss_pred HHHHHhhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCcccCCCccccCCCCCccccCCccccccceEEEEEcCC
Q 013160 77 LIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAP 156 (448)
Q Consensus 77 y~~~l~~l~~~~~~~~~~~~~~l~~~l~~lGLev~~q~f~~~~~~f~p~~ffss~~~~~~~~n~~~~~~G~NvygIlRAP 156 (448)
+.++|-....-+..+ .+.++++.++|++++.|+..-+ =-|++++. +
T Consensus 5 ~L~~L~~~~g~SG~E-~~v~~~l~~~l~~~~dev~~D~-------------------------------~GNli~~~--g 50 (356)
T PRK09864 5 LLQQLCEASAVSGDE-QEVRDILINTLEPCVNEITFDG-------------------------------LGSFVARK--G 50 (356)
T ss_pred HHHHHHcCCCCCCch-HHHHHHHHHHHHHhCCEEEECC-------------------------------CCCEEEEe--C
Confidence 456665555444433 5789999999999999865322 12788875 2
Q ss_pred CCCCceeEEEEEEeecC
Q 013160 157 RGDGKEAIVLVTPYNAV 173 (448)
Q Consensus 157 RgdGtEAIVLvap~~~~ 173 (448)
+ .+ ..++|.+|.|.-
T Consensus 51 ~-~~-~kvml~AHmDev 65 (356)
T PRK09864 51 N-KG-PKVAVVGHMDEV 65 (356)
T ss_pred C-CC-cEEEEEeccccc
Confidence 2 22 389999998764
Done!