Query 013162
Match_columns 448
No_of_seqs 89 out of 113
Neff 2.7
Searched_HMMs 29240
Date Mon Mar 25 05:21:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013162.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013162hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ntx_A EMB|CAB41934.1, prone8; 100.0 4E-184 2E-188 1335.9 22.9 327 90-440 5-332 (365)
2 2dae_A KIAA0733 protein; mitog 74.2 1.3 4.5E-05 36.2 1.8 34 405-438 12-47 (75)
3 1wgl_A TOLL-interacting protei 58.6 7.3 0.00025 29.7 3.1 37 404-440 10-46 (59)
4 2dhy_A CUE domain-containing p 42.6 18 0.0006 28.5 3.0 36 405-440 20-55 (67)
5 3o0y_A Lipoprotein; structural 42.6 1.1E+02 0.0037 32.4 9.8 84 266-366 232-326 (609)
6 2w9y_A CE-FAR-7, fatty acid/re 38.7 32 0.0011 30.7 4.4 38 386-423 48-86 (140)
7 1b63_A MUTL; DNA mismatch repa 31.1 76 0.0026 30.3 6.0 29 168-204 133-161 (333)
8 2oz8_A MLL7089 protein; struct 30.5 33 0.0011 33.0 3.4 50 94-143 62-125 (389)
9 2qq6_A Mandelate racemase/muco 26.3 52 0.0018 31.8 4.0 27 118-144 87-114 (410)
10 2fym_A Enolase; RNA degradosom 25.6 58 0.002 32.1 4.2 29 115-143 103-132 (431)
11 3msq_A Putative ubiquinone bio 23.7 36 0.0012 31.5 2.2 29 304-335 76-104 (224)
12 3kfo_A Nucleoporin NUP133; nuc 23.5 1E+02 0.0035 30.0 5.4 84 275-371 76-173 (288)
13 4axd_A Inositol-pentakisphosph 21.9 42 0.0014 34.7 2.5 33 253-290 173-207 (456)
14 2ptz_A Enolase; lyase, glycoly 21.2 80 0.0027 31.4 4.3 50 94-143 67-134 (432)
15 1kl9_A Eukaryotic translation 20.5 86 0.0029 28.1 4.0 38 274-312 139-176 (182)
16 3kb4_A ALR8543 protein; alpha- 20.3 47 0.0016 31.0 2.3 30 305-337 72-101 (225)
No 1
>2ntx_A EMB|CAB41934.1, prone8; dimer, guanine nucleotide exchange factor, signaling protein; HET: MSE; 2.20A {Arabidopsis thaliana} PDB: 2nty_A* 2wbl_A
Probab=100.00 E-value=4.4e-184 Score=1335.91 Aligned_cols=327 Identities=53% Similarity=0.878 Sum_probs=278.9
Q ss_pred CCChhHHHHHHHHHHHhhhccCCCCCCcchhHHHHHHHHHhHhHHhhhccccccCCCchhHHhhhhhhcceeeeccceeE
Q 013162 90 DTDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRREMQWLLCVSDSIV 169 (448)
Q Consensus 90 ~~~~se~E~MKErFaKLLLGEDMSGggKGV~tALAiSNAITNL~AtVFGelwrLEPL~~ekK~mWrREmdwLLSVsD~IV 169 (448)
+...+|+||||||||||||||||||||||||||||||||||||||||||||||||||++|||+|||||||||||||||||
T Consensus 5 ~~~~se~e~mKErFaKLLLGEDmSG~gkGV~tAlAiSNAITNL~AsvFGe~~rLEPl~~ekK~~WrrEmdwLLsv~d~IV 84 (365)
T 2ntx_A 5 ERQQADMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQDRQARWKKEIDWLLSVTDHIV 84 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCTTSSCCSCCHHHHHHHHHHHHHHHHHTTC-CCCCCCHHHHHHHHHHHHHHHGGGGGCE
T ss_pred cCCchHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHhhhhHHHHHHhhhhhccCCCChHHHHHHHHhcceeeeccceeE
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeecceecCCCceEEeeccccccccccCchhHHHHHHHHHHHhhccCC-CeeEEEeCCcccCCCCCCCCCCCCCCCCCC
Q 013162 170 ELVPSIQQFPGGGTYEVMATRPRSDLYMNLPALKKLDAMLIGMLDGFCE-TEFWYVDRGIVVGDGGDRDAFSSMVPSGRP 248 (448)
Q Consensus 170 ElvPs~Q~~~dG~~~EvM~trpRsDl~~NLPALrKLD~MLle~LDsF~d-tEFWYv~~g~~~~~~~~~~~~~~s~s~r~~ 248 (448)
|||||+|++|||+++|||+||||+|||||||||||||+||||+||||+| ||||||++|+. + +.++.
T Consensus 85 E~vPs~Q~~~dG~~~EvM~~r~RsDl~~NlPALrKLD~MLle~LDsf~d~tEFWYv~~g~~-----~--------~~~~~ 151 (365)
T 2ntx_A 85 EFVPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAMLIDTLDNFRGHNEFWYVSRDSE-----E--------GQQAR 151 (365)
T ss_dssp EEEEC----------CCEEEEECHHHHTHHHHHHHHHHHHHHHHHGGGSCCCCEEC------------------------
T ss_pred EeccccccCCCCceEEEeeccccchhhcCcHHHHHHHHHHHHHHHhCCCCCeeEEecCCCC-----c--------cccCC
Confidence 9999999999999999999999999999999999999999999999999 99999999941 1 12457
Q ss_pred ccccCccccccCCCCCCCCCCHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcCCCcHHHHhhcccCCccchhHHHHHHhh
Q 013162 249 SVRHEEKWWLPCPKVPQNGLSEDVRKKLQQCRDCTNQILKAAMAINSSVLAEMEIPAAYLETLPKNGKACLGDIIYRYIT 328 (448)
Q Consensus 249 ~~R~eeKWWLP~P~VPp~GLSe~~RK~Lq~qrd~~nQIlKAAmAINs~vL~EMeIPe~y~esLPKnGrasLGD~iYr~iT 328 (448)
.||||+|||||+|||||+||||++||+|||||||||||||||||||++||+|||||++|+|+||||||+||||.|||+||
T Consensus 152 ~~r~eeKWWLP~p~VP~~GLSe~~RK~L~~qrd~~~QIlKAAmAIN~~vL~EMeiP~~y~esLPKnGrasLGd~iYr~it 231 (365)
T 2ntx_A 152 NDRTNDKWWLPPVKVPPGGLSEPSRRMLYFQKDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSIT 231 (365)
T ss_dssp ---------CCCEECCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHSCSCHHHHHCHHHHHHHT
T ss_pred cccccccccCCCCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhHhHhhcCCCcHHHHHhcccccccccHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCChHHHhhhcCCCchhhHHHHhhhhHHHHHHHHhhhhccccCCCCCCcCCccccccccccchhhHHHHHHHHHHHHH
Q 013162 329 ADQFSPECLLDCLDLSSEHHTLEVANRIEAAVHVWKQKDQRKHLSHSKSRRSSWGGKVKGLVADSEKNHSLAHRAETLLH 408 (448)
Q Consensus 329 ~d~Fspe~lL~~ldLssEH~aLe~anRiEAai~vWrrK~~~k~~~~~~~~ksSWg~~Vkd~~~d~dK~e~laeRAEtlL~ 408 (448)
+|+|||||||+||||+|||+|||+||||||||||||||++.++ +|+|||.+| +.|||++|++|||+||+
T Consensus 232 ~d~Fspe~ll~~ldlssEH~~le~anRiEAsi~vWrrk~~~k~------~kssW~~~~-----~~dK~~~l~eRAEtlL~ 300 (365)
T 2ntx_A 232 EEWFDPEQFLAMLDMSTEHKVLDLKNRIEASVVIWKRKLHTKD------TKSSWGSAV-----SLEKRELFEERAETILV 300 (365)
T ss_dssp CSSCCHHHHHHTSCCCSHHHHHHHHHHHHHHHHHHHHC-------------------------CHHHHHHHHHHHHHHHH
T ss_pred hccCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHhhcCCC------CCCCCcccc-----chhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999887 899997654 48999999999999999
Q ss_pred HHHhhCCCCCcchhhhhhhhcccchhhhhhhh
Q 013162 409 SLRLRFPGLPQTALDMNKIQYNKVLARSFCIL 440 (448)
Q Consensus 409 ~LKqRfPgLpQT~LD~sKIQyNkDVG~aILE~ 440 (448)
||||||||||||+||++||||||||||||||-
T Consensus 301 ~LKqRfPglpQTsLD~sKIQyNkDVG~aILES 332 (365)
T 2ntx_A 301 LLKQKFPGLPQSSLDISKIQFNKDVGQAVLES 332 (365)
T ss_dssp HHHHHCTTCCCCHHHHHHHHHCCCHHHHHHHH
T ss_pred HHHHhCCCCCchHHHHHHHHccchHHHHHHHH
Confidence 99999999999999999999999999999994
No 2
>2dae_A KIAA0733 protein; mitogen-activated protein kinase kinase kinase 7 interacting protein 2, MAP3K7IP2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.24 E-value=1.3 Score=36.16 Aligned_cols=34 Identities=26% Similarity=0.434 Sum_probs=24.2
Q ss_pred HHHHHHHhhCCCCCcchhhhhhhh--cccchhhhhh
Q 013162 405 TLLHSLRLRFPGLPQTALDMNKIQ--YNKVLARSFC 438 (448)
Q Consensus 405 tlL~~LKqRfPgLpQT~LD~sKIQ--yNkDVG~aIL 438 (448)
.|++-||||||.+|+...--+=.| +|.|---.+|
T Consensus 12 qvfheLkQrFPEvPd~VVsqc~~qN~~Nl~aC~~~L 47 (75)
T 2dae_A 12 QVLHDLRQKFPEVPEVVVSRCMLQNNNNLDACCAVL 47 (75)
T ss_dssp HHHHHHHHHSSSSCHHHHHHHHTTTTSCSHHHHHHH
T ss_pred HHHHHHHHhcccCcHHHHHHHHHHhccCHHHHHHHH
Confidence 378899999999999988765555 4444444444
No 3
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=58.58 E-value=7.3 Score=29.75 Aligned_cols=37 Identities=16% Similarity=0.113 Sum_probs=31.8
Q ss_pred HHHHHHHHhhCCCCCcchhhhhhhhcccchhhhhhhh
Q 013162 404 ETLLHSLRLRFPGLPQTALDMNKIQYNKVLARSFCIL 440 (448)
Q Consensus 404 EtlL~~LKqRfPgLpQT~LD~sKIQyNkDVG~aILE~ 440 (448)
|.-+..|+.-||++.+..+-..=..+|.||..||=.|
T Consensus 10 ee~l~~L~emFP~ld~~~I~~vL~a~~gdvd~aI~~L 46 (59)
T 1wgl_A 10 EEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSL 46 (59)
T ss_dssp HHHHHHHHHHCSSSCHHHHHHHHTTTTTCHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence 4567789999999999999999999999999888444
No 4
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.63 E-value=18 Score=28.46 Aligned_cols=36 Identities=8% Similarity=0.162 Sum_probs=30.2
Q ss_pred HHHHHHHhhCCCCCcchhhhhhhhcccchhhhhhhh
Q 013162 405 TLLHSLRLRFPGLPQTALDMNKIQYNKVLARSFCIL 440 (448)
Q Consensus 405 tlL~~LKqRfPgLpQT~LD~sKIQyNkDVG~aILE~ 440 (448)
..+..||+-||.+....+...=...|.||..+|=.|
T Consensus 20 ~~v~~L~~MFP~lD~~vI~~vL~a~~G~vd~aId~L 55 (67)
T 2dhy_A 20 QAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQL 55 (67)
T ss_dssp HHHHHHHHHCSSSCHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence 346679999999999999988889999999887443
No 5
>3o0y_A Lipoprotein; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, lipid protein; 1.70A {Colwellia psychrerythraea}
Probab=42.61 E-value=1.1e+02 Score=32.39 Aligned_cols=84 Identities=14% Similarity=0.197 Sum_probs=48.5
Q ss_pred CCCCHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcCCCcHHHHhhcccCCc-----cch--hHHHHHHh----hcCCCCh
Q 013162 266 NGLSEDVRKKLQQCRDCTNQILKAAMAINSSVLAEMEIPAAYLETLPKNGK-----ACL--GDIIYRYI----TADQFSP 334 (448)
Q Consensus 266 ~GLSe~~RK~Lq~qrd~~nQIlKAAmAINs~vL~EMeIPe~y~esLPKnGr-----asL--GD~iYr~i----T~d~Fsp 334 (448)
+||++..++.|..+ |..||+..|+--+.==-.|++.|-.+|+ ..| |+..|+++ |.-..+|
T Consensus 232 ~~l~~~~~~~l~~~---------a~~ai~~~v~PAy~~l~~~l~~l~p~a~~~~G~~~lP~G~~~Y~~~l~~~ttt~~t~ 302 (609)
T 3o0y_A 232 DSLTTEQKQSLITQ---------VIAKVSQVVYPAYQSVEKASEQLLSEARSESGIWAQPKGSVYYQDAIKQLGDSELSP 302 (609)
T ss_dssp TTSCHHHHHHHHHH---------HHHHHHHTHHHHHHHHHHHHHHHTTTSBSCCSGGGSTTHHHHHHHHHHHHHCCCSCH
T ss_pred ccCCHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcchhcCCChHHHHHHHHHHhhCCCCCH
Confidence 46999888877544 2233444333222222234444432333 334 99999987 5566799
Q ss_pred HHHhhhcCCCchhhHHHHhhhhHHHHHHHHhh
Q 013162 335 ECLLDCLDLSSEHHTLEVANRIEAAVHVWKQK 366 (448)
Q Consensus 335 e~lL~~ldLssEH~aLe~anRiEAai~vWrrK 366 (448)
|++.. -.++-..||.+.|..=.++
T Consensus 303 dEi~~--------~gl~ev~ri~~em~~i~~~ 326 (609)
T 3o0y_A 303 TQIHQ--------IGLDEVARISGVMNEILLA 326 (609)
T ss_dssp HHHHH--------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH--------HHHHHHHHHHHHHHHHHHH
Confidence 98753 3466777888877654333
No 6
>2w9y_A CE-FAR-7, fatty acid/retinol binding protein protein 7, isoform A, confirmed by transcript...; lipid transport; HET: CSX; 1.80A {Caenorhabditis elegans}
Probab=38.69 E-value=32 Score=30.66 Aligned_cols=38 Identities=24% Similarity=0.437 Sum_probs=30.6
Q ss_pred ccccccch-hhHHHHHHHHHHHHHHHHhhCCCCCcchhh
Q 013162 386 VKGLVADS-EKNHSLAHRAETLLHSLRLRFPGLPQTALD 423 (448)
Q Consensus 386 Vkd~~~d~-dK~e~laeRAEtlL~~LKqRfPgLpQT~LD 423 (448)
..+++... +|..-|-+|++.|...|+++.-+|+..+-.
T Consensus 48 e~e~i~alK~KSp~L~~K~~~l~~~lk~Ki~~L~Peak~ 86 (140)
T 2w9y_A 48 CGEMIDEVSKKHPELGKRLATVLEGNKKRLDGLSPAAVE 86 (140)
T ss_dssp -TTHHHHHHHHCHHHHHHHHHHHHHHHHTTTTCCHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 34555554 789999999999999999999999876543
No 7
>1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A*
Probab=31.05 E-value=76 Score=30.31 Aligned_cols=29 Identities=45% Similarity=0.644 Sum_probs=22.7
Q ss_pred eEEeeecceecCCCceEEeeccccccccccCchhHHH
Q 013162 168 IVELVPSIQQFPGGGTYEVMATRPRSDLYMNLPALKK 204 (448)
Q Consensus 168 IVElvPs~Q~~~dG~~~EvM~trpRsDl~~NLPALrK 204 (448)
.++..|. ..+.||+++| .||+-|+|+-+|
T Consensus 133 ~~~~~~~--~~~~GT~V~v------~~Lf~n~P~r~k 161 (333)
T 1b63_A 133 NVTVKPA--AHPVGTTLEV------LDLFYNTPARRK 161 (333)
T ss_dssp EEEEEEE--CCCSEEEEEE------ESTTTTCHHHHH
T ss_pred eEeeecc--cCCCCCEEEE------ecccccchhhhh
Confidence 4566664 3578999999 689999999766
No 8
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=30.54 E-value=33 Score=33.03 Aligned_cols=50 Identities=20% Similarity=0.142 Sum_probs=37.1
Q ss_pred hHHHHHHHHHHHhhhccC-------CCCCCcc------hhHHHHHHHHHhHhHHhhhcc-cccc
Q 013162 94 SEVEMMKERFAKLLLGED-------MSGGGKG------VCTALAISNAITNLSATVFGE-LWRL 143 (448)
Q Consensus 94 se~E~MKErFaKLLLGED-------MSGggKG------V~tALAiSNAITNL~AtVFGe-lwrL 143 (448)
+-+..+++.++.+|.|+| +-+++.| .+...||..|+-.|.|-..|. +|+|
T Consensus 62 ~~~~~i~~~l~p~l~G~d~~~~~~~~~~~~~~~~~~l~~~a~~aid~AlwDl~~k~~g~Pl~~l 125 (389)
T 2oz8_A 62 EIESVFEHEVWPSLKGNRAIALVHRVNRPRGGNQRAYSLPFHEAVQVALWDLAAKEAGLPLHVL 125 (389)
T ss_dssp HHHHHHHHHTHHHHTTSCHHHHTTCCCCCC------CCSCCHHHHHHHHHHHHHHHHTSBHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHhccCCCccchhhHHHHHHHHHHHHHHHHHHhCCcHHHH
Confidence 345667777999999998 4334444 467789999999999998887 6665
No 9
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=26.33 E-value=52 Score=31.82 Aligned_cols=27 Identities=22% Similarity=0.336 Sum_probs=22.4
Q ss_pred chhHHHHHHHHHhHhHHhhhcc-ccccC
Q 013162 118 GVCTALAISNAITNLSATVFGE-LWRLE 144 (448)
Q Consensus 118 GV~tALAiSNAITNL~AtVFGe-lwrLE 144 (448)
+.++..||+.|+-.|.|-..|. +|+|=
T Consensus 87 ~~~A~~aid~AlwDl~gk~~g~Pl~~lL 114 (410)
T 2qq6_A 87 VITALSGIETALWDLAGKLQGVPVYRLL 114 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCGGGGT
T ss_pred HHHHHHHHHHHHHHHhHhHcCCcHHHHc
Confidence 4566789999999999999997 77763
No 10
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=25.59 E-value=58 Score=32.10 Aligned_cols=29 Identities=28% Similarity=0.247 Sum_probs=24.1
Q ss_pred CCcchhHHHHHHHHHhHhHHhhhcc-cccc
Q 013162 115 GGKGVCTALAISNAITNLSATVFGE-LWRL 143 (448)
Q Consensus 115 ggKGV~tALAiSNAITNL~AtVFGe-lwrL 143 (448)
++.|..+..||+.|+-.+.|-..|. +|+|
T Consensus 103 ~~~g~~A~~avd~AlwD~~ak~~g~Pl~~l 132 (431)
T 2fym_A 103 SKFGANAILAVSLANAKAAAAAKGMPLYEH 132 (431)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTTSCHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHhCCcHHHH
Confidence 4566788899999999999999887 6665
No 11
>3msq_A Putative ubiquinone biosynthesis protein; COQ4 superfamily, structural genomics, joint center for STRU genomics, JCSG; 2.85A {Nostoc punctiforme}
Probab=23.73 E-value=36 Score=31.53 Aligned_cols=29 Identities=31% Similarity=0.471 Sum_probs=21.8
Q ss_pred cHHHHhhcccCCccchhHHHHHHhhcCCCChH
Q 013162 304 PAAYLETLPKNGKACLGDIIYRYITADQFSPE 335 (448)
Q Consensus 304 Pe~y~esLPKnGrasLGD~iYr~iT~d~Fspe 335 (448)
--.++.+||++ |||-..++.|....|+|+
T Consensus 76 dl~~L~~lP~g---TlG~~Y~~fl~~~g~spd 104 (224)
T 3msq_A 76 NLDDLAKLPEG---TLGHVYAREMKARGFDPY 104 (224)
T ss_dssp CHHHHHTSCTT---BHHHHHHHHHHHC-----
T ss_pred CHHHHHcCCCC---ChHHHHHHHHHHcCCCCC
Confidence 34789999998 999999999999999998
No 12
>3kfo_A Nucleoporin NUP133; nuclear pore complex, yeast, proteolysis, structural genomics, PSI2, protein structure initiative; HET: MSE; 1.90A {Saccharomyces cerevisiae}
Probab=23.53 E-value=1e+02 Score=30.00 Aligned_cols=84 Identities=8% Similarity=0.130 Sum_probs=57.9
Q ss_pred HhhhhhhhHHHHHHHHHHhhhhhhhcCCCcHHHHhhcccCCccchhHHHHHHhhcCCCChHHHhhhcCCCch----hhHH
Q 013162 275 KLQQCRDCTNQILKAAMAINSSVLAEMEIPAAYLETLPKNGKACLGDIIYRYITADQFSPECLLDCLDLSSE----HHTL 350 (448)
Q Consensus 275 ~Lq~qrd~~nQIlKAAmAINs~vL~EMeIPe~y~esLPKnGrasLGD~iYr~iT~d~Fspe~lL~~ldLssE----H~aL 350 (448)
-++.|.+...+|.++.. -++..|.+. .=+.-+.+.++|.+.....+|++|++-|-|-.. +.||
T Consensus 76 lI~~Q~~L~~~i~~~~~----------~~~k~~~~~---al~~lf~~~~~kL~~~~~L~~~eLIDLLTLid~~~~F~~AL 142 (288)
T 3kfo_A 76 TIDAEKNISNKLKKGEV----------QICKRFKNG---SIREVFNILVEELKSTTVVNLSDLVELYSMLDDEESLFIPL 142 (288)
T ss_dssp HHHHHHHHHHHHHHTCS----------CBCGGGSSH---HHHHHHHHHHHHHHSSSCCCHHHHHHHHTTBCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhh----------HHHHHhhhH---HHHHHHHHHHHHHHCCCcCCHHHHHHHHHhcCChhHHHHHH
Confidence 45788899999887421 245444421 003356677788889999999999998766543 3578
Q ss_pred HHhhhh----------HHHHHHHHhhhhccc
Q 013162 351 EVANRI----------EAAVHVWKQKDQRKH 371 (448)
Q Consensus 351 e~anRi----------EAai~vWrrK~~~k~ 371 (448)
.++... .+---||||=+-.-+
T Consensus 143 kvL~~~~~~~~~e~~~~l~~lIWRRcilrDd 173 (288)
T 3kfo_A 143 RLLSVDGNLLNFEVKKFLNALVWRRIVLLNA 173 (288)
T ss_dssp HHHHHHGGGSCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhccccCCHHHHHHHHHHHHHHHHhhcC
Confidence 888777 355789999886644
No 13
>4axd_A Inositol-pentakisphosphate 2-kinase; transferase, inositol kinase, phytic acid, protein kinase, I signalling; HET: ANP CIT; 2.05A {Arabidopsis thaliana} PDB: 4axc_A 4aqk_A* 4axf_A* 4axe_A* 2xam_A* 2xal_A* 2xan_A* 2xao_A* 2xar_A* 3udz_A* 3udt_A* 3uds_A*
Probab=21.88 E-value=42 Score=34.73 Aligned_cols=33 Identities=24% Similarity=0.310 Sum_probs=24.7
Q ss_pred Cccc-cccCCC-CCCCCCCHHHHHHhhhhhhhHHHHHHHH
Q 013162 253 EEKW-WLPCPK-VPQNGLSEDVRKKLQQCRDCTNQILKAA 290 (448)
Q Consensus 253 eeKW-WLP~P~-VPp~GLSe~~RK~Lq~qrd~~nQIlKAA 290 (448)
-.|| |||.+. ||+ ...-+...+|=|+.|.+|++
T Consensus 173 KPKwGflp~s~~i~~-----~~~~k~~~CRfCm~Q~~K~~ 207 (456)
T 4axd_A 173 KPKCGFLPTSRFIGK-----ENMLKTSVSRFKMHQLLKLE 207 (456)
T ss_dssp CCCCCSCCCSTTCCG-----GGGGGGTSCHHHHHHHHHHH
T ss_pred cccccccCCCCCCCc-----ccccccccCHHHHHHHHHhc
Confidence 4799 999865 443 33445667999999999976
No 14
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=21.21 E-value=80 Score=31.37 Aligned_cols=50 Identities=30% Similarity=0.381 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHHhhhccCCC-----------------CCCcchhHHHHHHHHHhHhHHhhhcc-cccc
Q 013162 94 SEVEMMKERFAKLLLGEDMS-----------------GGGKGVCTALAISNAITNLSATVFGE-LWRL 143 (448)
Q Consensus 94 se~E~MKErFaKLLLGEDMS-----------------GggKGV~tALAiSNAITNL~AtVFGe-lwrL 143 (448)
.-++.+.+.++.+|+|.|.. +++.|..+.+||+.|+-.++|-..|. +|+|
T Consensus 67 ~av~~v~~~iap~LiG~d~~~~~~i~~~m~~~~~~~~~~~~~~~Ai~aVd~AlwD~~ak~~g~Ply~l 134 (432)
T 2ptz_A 67 QAVKNVNEVIGPALIGRDELKQEELDTLMLRLDGTPNKGKLGANAILGCSMAISKAAAAAKGVPLYRY 134 (432)
T ss_dssp HHHHHHHHTHHHHHTTCCTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHCCCChhhHHHHHHHHHHhhCCCCcchHHHHHHHHHHHHHHHHHHHHhCCcHHHH
Confidence 34455555566666666521 24556678899999999999999987 6665
No 15
>1kl9_A Eukaryotic translation initiation factor 2 subuni; OB fold, helical domain; 1.90A {Homo sapiens} SCOP: a.60.14.1 b.40.4.5
Probab=20.51 E-value=86 Score=28.12 Aligned_cols=38 Identities=18% Similarity=0.226 Sum_probs=29.8
Q ss_pred HHhhhhhhhHHHHHHHHHHhhhhhhhcCCCcHHHHhhcc
Q 013162 274 KKLQQCRDCTNQILKAAMAINSSVLAEMEIPAAYLETLP 312 (448)
Q Consensus 274 K~Lq~qrd~~nQIlKAAmAINs~vL~EMeIPe~y~esLP 312 (448)
|+..|..+.+...||.|-. |..+|.+..||+.+.+.|=
T Consensus 139 ~~~~~~~~~~~~~f~~~~~-~~~~l~~~~~~~~~~~~l~ 176 (182)
T 1kl9_A 139 DKYKRPGYGAYDAFKHAVS-DPSILDSLDLNEDEREVLI 176 (182)
T ss_dssp HHHTCTTHHHHHHHHHHHH-CGGGGTTSSCCHHHHHHHH
T ss_pred hhcCCcchhHHHHHHHHhc-ChhhhhhcCCCHHHHHHHH
Confidence 3445555567888888877 9999999999999987763
No 16
>3kb4_A ALR8543 protein; alpha-beta protein., structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium, NESG, function; HET: GR0; 2.41A {Nostoc SP}
Probab=20.28 E-value=47 Score=31.04 Aligned_cols=30 Identities=23% Similarity=0.361 Sum_probs=25.2
Q ss_pred HHHHhhcccCCccchhHHHHHHhhcCCCChHHH
Q 013162 305 AAYLETLPKNGKACLGDIIYRYITADQFSPECL 337 (448)
Q Consensus 305 e~y~esLPKnGrasLGD~iYr~iT~d~Fspe~l 337 (448)
-.++.+||++ |||-..++.|....|+|+..
T Consensus 72 l~~L~~lP~g---TlG~~Y~~fl~~~g~~pd~~ 101 (225)
T 3kb4_A 72 LEQLHQLPNY---TLGYMYADHMIRNQLTPPPV 101 (225)
T ss_dssp HHHHTTSCTT---BHHHHHHHHHHHTTCCC---
T ss_pred HHHHHcCCCC---ChHHHHHHHHHHcCCCCCcC
Confidence 3689999998 99999999999999999954
Done!