Query 013163
Match_columns 448
No_of_seqs 396 out of 2613
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 05:22:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013163.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013163hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 2.1E-66 7.2E-71 518.6 21.3 284 86-435 25-318 (329)
2 1nlt_A Protein YDJ1, mitochond 100.0 2.6E-58 8.8E-63 444.1 21.6 229 198-428 9-248 (248)
3 3agx_A DNAJ homolog subfamily 100.0 2.1E-45 7.1E-50 338.0 20.9 176 200-431 2-179 (181)
4 2q2g_A HSP40 protein, heat sho 100.0 2.8E-44 9.6E-49 330.3 20.4 176 199-431 2-179 (180)
5 1c3g_A Heat shock protein 40; 100.0 1.1E-41 3.9E-46 310.1 15.2 168 201-428 1-170 (170)
6 3i38_A Putative chaperone DNAJ 100.0 6.6E-28 2.3E-32 203.2 12.9 96 337-434 2-97 (109)
7 1xao_A YDJ1, mitochondrial pro 99.9 1.8E-25 6.2E-30 191.9 10.7 95 341-435 1-100 (121)
8 1bq0_A DNAJ, HSP40; chaperone, 99.9 2.2E-23 7.6E-28 174.0 4.2 74 88-161 2-75 (103)
9 2ctt_A DNAJ homolog subfamily 99.8 2.4E-22 8.1E-27 168.0 4.2 103 200-302 1-103 (104)
10 2dn9_A DNAJ homolog subfamily 99.8 7.3E-22 2.5E-26 156.8 5.9 72 86-157 4-75 (79)
11 2ctr_A DNAJ homolog subfamily 99.8 1.4E-21 4.7E-26 158.4 7.3 75 86-161 4-78 (88)
12 1hdj_A Human HSP40, HDJ-1; mol 99.8 9.3E-22 3.2E-26 155.4 6.0 73 87-160 1-73 (77)
13 2yua_A Williams-beuren syndrom 99.8 2.5E-21 8.7E-26 160.3 7.1 71 85-155 13-83 (99)
14 2dmx_A DNAJ homolog subfamily 99.8 2.9E-21 9.9E-26 157.8 6.5 76 86-161 6-82 (92)
15 2ej7_A HCG3 gene; HCG3 protein 99.8 3E-21 1E-25 154.3 6.3 73 86-158 6-79 (82)
16 2ctq_A DNAJ homolog subfamily 99.8 3.5E-21 1.2E-25 163.1 5.6 74 86-159 17-90 (112)
17 2ctw_A DNAJ homolog subfamily 99.8 5.7E-21 1.9E-25 161.0 6.9 76 85-160 13-88 (109)
18 2cug_A Mkiaa0962 protein; DNAJ 99.8 5.5E-21 1.9E-25 154.9 6.4 72 85-157 13-84 (88)
19 2o37_A Protein SIS1; HSP40, J- 99.8 3.7E-21 1.3E-25 157.2 5.4 72 87-161 6-77 (92)
20 2ctp_A DNAJ homolog subfamily 99.8 5.4E-21 1.9E-25 151.4 5.3 72 86-158 4-75 (78)
21 2lgw_A DNAJ homolog subfamily 99.8 1.1E-20 3.7E-25 156.4 5.3 73 89-161 2-75 (99)
22 2och_A Hypothetical protein DN 99.8 1.5E-20 5.2E-25 146.9 5.6 68 87-157 6-73 (73)
23 1wjz_A 1700030A21RIK protein; 99.8 2.1E-20 7.4E-25 153.2 5.2 73 84-156 11-89 (94)
24 3apq_A DNAJ homolog subfamily 99.8 8.1E-20 2.8E-24 170.6 4.9 73 89-161 2-74 (210)
25 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 2.9E-19 9.8E-24 150.5 4.2 71 86-156 12-86 (109)
26 2ys8_A RAB-related GTP-binding 99.7 2.6E-18 9E-23 139.6 6.8 62 88-150 26-87 (90)
27 2l6l_A DNAJ homolog subfamily 99.7 3.1E-18 1.1E-22 153.2 5.5 72 85-156 6-83 (155)
28 1iur_A KIAA0730 protein; DNAJ 99.7 5.1E-18 1.7E-22 137.1 4.8 68 85-152 12-80 (88)
29 1gh6_A Large T antigen; tumor 99.7 1.7E-18 5.8E-23 146.5 0.8 65 88-156 7-73 (114)
30 1faf_A Large T antigen; J doma 99.7 8.1E-18 2.8E-22 133.3 4.0 67 88-159 10-78 (79)
31 2pf4_E Small T antigen; PP2A, 99.7 3.9E-18 1.3E-22 154.1 0.1 65 88-156 10-76 (174)
32 2qwo_B Putative tyrosine-prote 99.7 2.6E-17 9.1E-22 133.4 2.8 56 89-144 33-91 (92)
33 3hho_A CO-chaperone protein HS 99.6 5.2E-17 1.8E-21 147.8 4.7 68 88-155 3-77 (174)
34 1n4c_A Auxilin; four helix bun 99.6 5.3E-17 1.8E-21 147.5 4.1 63 89-151 117-182 (182)
35 1fpo_A HSC20, chaperone protei 99.6 9.6E-17 3.3E-21 145.6 3.8 66 90-155 2-74 (171)
36 3apo_A DNAJ homolog subfamily 99.6 4.7E-17 1.6E-21 180.1 0.2 76 86-161 18-93 (780)
37 3bvo_A CO-chaperone protein HS 99.6 2.5E-16 8.5E-21 146.9 4.8 66 88-153 42-114 (207)
38 2guz_A Mitochondrial import in 99.6 4.8E-16 1.6E-20 120.5 5.1 60 86-149 11-71 (71)
39 3ag7_A Putative uncharacterize 99.6 2.2E-16 7.6E-21 131.8 2.3 58 88-146 40-104 (106)
40 3uo3_A J-type CO-chaperone JAC 99.5 8.1E-16 2.8E-20 140.6 1.9 67 86-155 8-81 (181)
41 1exk_A DNAJ protein; extended 99.5 7.8E-15 2.7E-19 116.0 5.6 78 217-294 1-78 (79)
42 1nlt_A Protein YDJ1, mitochond 99.2 1.3E-11 4.5E-16 118.4 8.1 117 227-349 54-246 (248)
43 2y4t_A DNAJ homolog subfamily 98.9 4.3E-10 1.5E-14 113.5 5.2 65 89-153 382-449 (450)
44 3i38_A Putative chaperone DNAJ 98.8 3.7E-09 1.3E-13 88.5 3.8 81 198-349 9-89 (109)
45 1xao_A YDJ1, mitochondrial pro 98.7 7.2E-09 2.5E-13 88.3 5.0 84 198-349 4-91 (121)
46 2guz_B Mitochondrial import in 98.7 1.3E-08 4.4E-13 76.8 4.2 53 89-145 4-59 (65)
47 1c3g_A Heat shock protein 40; 98.6 6.7E-08 2.3E-12 87.2 7.7 75 348-422 2-85 (170)
48 3lz8_A Putative chaperone DNAJ 98.6 3.5E-08 1.2E-12 98.2 6.0 76 345-420 139-228 (329)
49 2q2g_A HSP40 protein, heat sho 98.6 8.9E-08 3E-12 87.2 8.1 77 346-422 3-91 (180)
50 3agx_A DNAJ homolog subfamily 98.5 1.9E-07 6.6E-12 85.1 7.5 76 346-422 2-91 (181)
51 2ctt_A DNAJ homolog subfamily 97.8 5.5E-06 1.9E-10 68.4 1.2 46 227-280 45-95 (104)
52 3lcz_A YCZA, inhibitor of trap 97.6 1.2E-05 4.3E-10 57.8 1.2 32 264-295 7-38 (53)
53 3pmq_A Decaheme cytochrome C M 97.6 2.1E-06 7.2E-11 92.1 -4.8 74 204-277 168-257 (669)
54 1exk_A DNAJ protein; extended 97.5 5.9E-05 2E-09 58.7 3.7 46 243-293 10-63 (79)
55 2bx9_A Anti-trap, AT, tryptoph 96.8 0.00039 1.4E-08 49.9 1.6 24 268-291 11-34 (53)
56 3lcz_A YCZA, inhibitor of trap 96.8 0.00048 1.6E-08 49.5 1.8 27 228-257 10-36 (53)
57 2bx9_A Anti-trap, AT, tryptoph 96.7 0.00051 1.7E-08 49.3 1.9 28 228-258 10-37 (53)
58 2pzi_A Probable serine/threoni 87.0 0.28 9.5E-06 52.8 2.9 46 88-141 628-675 (681)
59 2qkd_A Zinc finger protein ZPR 71.1 9.3 0.00032 38.4 7.6 27 363-393 294-320 (404)
60 2qkd_A Zinc finger protein ZPR 68.5 8.7 0.0003 38.6 6.8 27 363-393 86-112 (404)
61 1ltl_A DNA replication initiat 58.4 17 0.00058 34.4 6.5 17 418-434 255-271 (279)
62 1msz_A DNA-binding protein smu 43.1 15 0.00051 28.6 2.7 23 412-434 35-57 (86)
63 2jrp_A Putative cytoplasmic pr 41.5 25 0.00086 27.0 3.7 52 228-289 3-60 (81)
64 2vl6_A SSO MCM N-TER, minichro 38.8 99 0.0034 28.7 8.4 63 265-334 167-234 (268)
65 2aus_D NOP10, ribosome biogene 33.7 15 0.00052 26.5 1.3 13 263-275 14-26 (60)
66 2apo_B Ribosome biogenesis pro 31.7 19 0.00064 26.1 1.5 11 264-274 16-26 (60)
67 2cqn_A Formin-binding protein 31.1 30 0.001 26.2 2.7 54 102-156 7-63 (77)
68 2jne_A Hypothetical protein YF 30.8 28 0.00094 27.7 2.4 51 228-288 33-89 (101)
69 3nyb_B Protein AIR2; polya RNA 30.5 18 0.00061 27.9 1.3 53 226-279 4-59 (83)
70 2vf7_A UVRA2, excinuclease ABC 30.5 23 0.00079 39.0 2.7 30 247-276 641-671 (842)
71 3zxf_A Galectin-7; sugar bindi 29.9 65 0.0022 26.8 4.9 43 376-418 9-60 (138)
72 2r0h_A CGL3 lectin; galectin-r 28.9 1.3E+02 0.0043 26.2 6.7 44 375-418 9-68 (164)
73 2wkk_A Galectin-2; sugar-bindi 28.6 72 0.0025 27.1 5.0 43 375-417 9-58 (150)
74 2r6f_A Excinuclease ABC subuni 26.5 33 0.0011 38.4 3.0 31 246-276 755-786 (972)
75 3j20_Y 30S ribosomal protein S 26.5 49 0.0017 22.8 2.9 7 267-273 38-44 (50)
76 3nv1_A Galectin-9, galectin 9 25.6 81 0.0028 26.3 4.7 43 376-418 11-58 (138)
77 1ww7_A Galectin; carbohydrate 24.3 85 0.0029 27.1 4.7 43 376-418 15-69 (160)
78 2ns6_A Mobilization protein A; 22.2 92 0.0032 27.5 4.6 31 404-434 67-98 (185)
79 2zhn_A Galectin-9; beta sandwi 21.4 1.4E+02 0.0046 25.1 5.4 42 375-416 17-67 (148)
80 1qo8_A Flavocytochrome C3 fuma 21.1 6.9 0.00024 40.8 -3.6 62 229-290 14-86 (566)
81 1ltl_A DNA replication initiat 21.1 1.2E+02 0.0041 28.4 5.5 81 246-334 136-221 (279)
82 1mli_A Muconolactone isomerase 20.9 1.1E+02 0.0038 24.1 4.3 24 407-430 3-26 (96)
83 2k0a_A PRE-mRNA-splicing facto 20.4 20 0.00067 28.8 -0.2 58 220-287 15-79 (109)
84 2yro_A Galectin-8; GAL-BIND le 20.3 96 0.0033 26.4 4.2 44 375-418 19-69 (155)
85 2r83_A Synaptotagmin-1; C2A-C2 20.2 3.3E+02 0.011 24.6 8.4 82 331-414 86-180 (284)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=2.1e-66 Score=518.57 Aligned_cols=284 Identities=31% Similarity=0.555 Sum_probs=161.4
Q ss_pred CCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhccccccccccccccccccccccC
Q 013163 86 MSARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHEAFVHQETN 165 (448)
Q Consensus 86 ~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~~~~~~~~~ 165 (448)
+..+|||++|||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||++|+||.+|+.||+|+.........+
T Consensus 25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~ 103 (329)
T 3lz8_A 25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGR 103 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccc
Confidence 455899999999999999999999999999999999984 6899999999999999999999999999964321110000
Q ss_pred CCCCCCCCCC-CCcccccccccccchhhhccc---------ccCCCccccccccchhhhhccceeeeeeeeeccCCCCCC
Q 013163 166 GGPGHEGGFG-NPFQDIFNMENIFNFRDIFRN---------RMSGQDVKVAVELSFMEAVQGCTKTVTFQTELPCEACGG 235 (448)
Q Consensus 166 ~~~~g~~gf~-~~f~~~f~~~d~f~f~~~f~~---------~~~g~di~~~l~vsl~e~~~G~~k~i~~~~~~~C~~C~G 235 (448)
++...+++|+ .+|+++ | +++|+. ..+|.|+.+.|+|+|+|+|+|+++++.+++.+.|
T Consensus 104 ~~~~~~~~f~~~~f~di------F--~~~Fg~~g~~~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~----- 170 (329)
T 3lz8_A 104 QRQTHEQSYSQQDFDDI------F--SSMFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN----- 170 (329)
T ss_dssp -----------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC-----
T ss_pred ccccccCCcCCCchhhh------h--HhhhcCcCCCCCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec-----
Confidence 0000011121 123332 2 333331 3468899999999999999999999999876532
Q ss_pred CCCCCCCccccCcCCCCCCceEEeecceeeeEecccCCceeEEEeeeccccCCCeEEecceEEEEEecCCCCCCceeEEe
Q 013163 236 EGVPPGVKPEKCRRCKGSGMESIHSGFMSINQTCRQCGGTGHIITNWCKSCKGARVVKGSKSVKLDIMPGVDNNETLKVF 315 (448)
Q Consensus 236 sG~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~k~l~V~Ip~G~~~G~~i~~~ 315 (448)
+.|.+ .+...++++|+||||+++|++|+|+
T Consensus 171 ----------------g~G~v----------------------------------~~~~~~~l~V~IP~Gv~~G~~Irl~ 200 (329)
T 3lz8_A 171 ----------------VFGMI----------------------------------ESETPKTLNVKIPAGVVDGQRIRLK 200 (329)
T ss_dssp ----------------SCC-C----------------------------------CEEEEEEEEEEECTTCCTTCEEEES
T ss_pred ----------------CCeEE----------------------------------EEecceEEEEeCCCCCCCCCEEEEc
Confidence 11211 1233578999999999999999999
Q ss_pred ccCCCCCCCCCCccEEEEEEEEecccccccCcceEEEEEeCHHHHhcCCeeeeecCCCcEEEEeCCCCCCCcEEEEcCCC
Q 013163 316 RSGGADPDGNQPGDLYVTIKVREDPVFRREGANIHVDSVLSVTQAILGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKNKG 395 (448)
Q Consensus 316 g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~v~tldG~~~l~i~~g~~~g~~~~l~g~G 395 (448)
|+|++.+.++.+|||||+|+|+||+.|+|+|+||+++++|+++||+||++++||||||++.|+||+|++||++++|+|+|
T Consensus 201 G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~v~l~ip~gt~~g~~~rl~G~G 280 (329)
T 3lz8_A 201 GQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKG 280 (329)
T ss_dssp SCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETTCS
T ss_pred ccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCCEEEEECCCCCCCCEEEEcCCC
Confidence 99999887889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHhc
Q 013163 396 IKTRNSFSFGDQYVHFNVSIPTNLTQRQRELIEEFAKEER 435 (448)
Q Consensus 396 ~p~~~~~~~GDL~V~~~V~~P~~ls~~q~~ll~~~~~~~~ 435 (448)
||.. ..+|||||+|+|+||++||++|+++|++|++...
T Consensus 281 mP~~--~~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~~~~ 318 (329)
T 3lz8_A 281 LVSK--THTGDLFAVIKIVMPTKPDEKARELWQQLAAAEA 318 (329)
T ss_dssp CBCS--SCBCCEEEEEEECCCSSCCHHHHHHHHHHHHHTT
T ss_pred CCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhcc
Confidence 9975 4699999999999999999999999999998433
No 2
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=2.6e-58 Score=444.11 Aligned_cols=229 Identities=27% Similarity=0.598 Sum_probs=204.6
Q ss_pred cCCCccccccccchhhhhccceeeeeeeeeccCCCCCCCCCCCCCccccCcCCCCCCceE--Eeecce--eeeEecccCC
Q 013163 198 MSGQDVKVAVELSFMEAVQGCTKTVTFQTELPCEACGGEGVPPGVKPEKCRRCKGSGMES--IHSGFM--SINQTCRQCG 273 (448)
Q Consensus 198 ~~g~di~~~l~vsl~e~~~G~~k~i~~~~~~~C~~C~GsG~~~~~~~~~C~~C~G~G~~~--~~~g~~--~~~~~C~~C~ 273 (448)
.+|.|+.+.|+|||+|+|+|+++++.+++.+.|+.|+|+|+.++. ..+|+.|+|+|++. .+.|++ +++.+|+.|+
T Consensus 9 ~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~ 87 (248)
T 1nlt_A 9 QRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCH 87 (248)
T ss_dssp CBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCS
T ss_pred CCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCC-CccCCCCCCCcEEEEEEecCceEEEEEEcCCCCC
Confidence 478999999999999999999999999999999999999999988 58999999999875 345653 5778999999
Q ss_pred ceeEEE--eeeccccCCCeEEecceEEEEEecCCCCCCceeEEeccCCCCCCCCCCccEEEEEEEEecccccccCcceEE
Q 013163 274 GTGHII--TNWCKSCKGARVVKGSKSVKLDIMPGVDNNETLKVFRSGGADPDGNQPGDLYVTIKVREDPVFRREGANIHV 351 (448)
Q Consensus 274 G~G~~~--~~~C~~C~G~g~v~~~k~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~ 351 (448)
|+|+++ +++|+.|+|.+++.+.++++|+|||||++|++|+|+|+|++.++ +.+|||||+|+++||+.|+|+|+|||+
T Consensus 88 G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~-g~~GDl~v~i~v~~h~~F~R~G~DL~~ 166 (248)
T 1nlt_A 88 GTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPD-VIPGDVVFIVSERPHKSFKRDGDDLVY 166 (248)
T ss_dssp SSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTT-CBCCCEEEEEEECCCSSCEEETTEEEE
T ss_pred CcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCC-CCcceEEEEEEEecCccceeeCCEEEE
Confidence 999999 89999999999999999999999999999999999999999765 589999999999999999999999999
Q ss_pred EEEeCHHHHhcCCeeeeecCCCc-EEEEeCCC--CCCCcEEEEcCCCccCCCCCCCCcEEEEEEEECCCC--CCHHHHHH
Q 013163 352 DSVLSVTQAILGGTIQVPTLTGD-VVLKVRPG--TQPGQKVVLKNKGIKTRNSFSFGDQYVHFNVSIPTN--LTQRQREL 426 (448)
Q Consensus 352 ~~~Isl~eAllG~~~~v~tldG~-~~l~i~~g--~~~g~~~~l~g~G~p~~~~~~~GDL~V~~~V~~P~~--ls~~q~~l 426 (448)
+++|||+|||||++++||||||+ +.|+|||| ++||++++|+|+|||..+...+|||||+|+|+||++ ||++|+++
T Consensus 167 ~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~ 246 (248)
T 1nlt_A 167 EAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKK 246 (248)
T ss_dssp EEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-----------
T ss_pred EEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHh
Confidence 99999999999999999999996 89999999 999999999999999754447899999999999999 99999998
Q ss_pred HH
Q 013163 427 IE 428 (448)
Q Consensus 427 l~ 428 (448)
|+
T Consensus 247 l~ 248 (248)
T 1nlt_A 247 LE 248 (248)
T ss_dssp --
T ss_pred hC
Confidence 85
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=2.1e-45 Score=337.99 Aligned_cols=176 Identities=22% Similarity=0.420 Sum_probs=157.2
Q ss_pred CCccccccccchhhhhccceeeeeeeeeccCCCCCCCCCCCCCccccCcCCCCCCceEEeecceeeeEecccCCceeEEE
Q 013163 200 GQDVKVAVELSFMEAVQGCTKTVTFQTELPCEACGGEGVPPGVKPEKCRRCKGSGMESIHSGFMSINQTCRQCGGTGHII 279 (448)
Q Consensus 200 g~di~~~l~vsl~e~~~G~~k~i~~~~~~~C~~C~GsG~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~ 279 (448)
+.|+.+.|+|||+|+|+|+++++.+.+
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~----------------------------------------------------- 28 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISH----------------------------------------------------- 28 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEE-----------------------------------------------------
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEec-----------------------------------------------------
Confidence 467889999999999999999987653
Q ss_pred eeeccccCCCeEEecceEEEEEecCCCCCCceeEEeccCCCCCCCCCCccEEEEEEEEecccccccCcceEEEEEeCHHH
Q 013163 280 TNWCKSCKGARVVKGSKSVKLDIMPGVDNNETLKVFRSGGADPDGNQPGDLYVTIKVREDPVFRREGANIHVDSVLSVTQ 359 (448)
Q Consensus 280 ~~~C~~C~G~g~v~~~k~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~e 359 (448)
+|..|+|.+++.+.++++|+||||+++|++|+|+|+|++.+ ++.+|||||+|++++|+.|+|+|+|||++++||++|
T Consensus 29 --~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~-~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~e 105 (181)
T 3agx_A 29 --KRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS-NNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLRE 105 (181)
T ss_dssp --EEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCS-SSCCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHH
T ss_pred --ccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCC-CCCcccEEEEEEEeccccceeeCCcEEEEEEcCHHH
Confidence 23344445556678999999999999999999999999987 478999999999999999999999999999999999
Q ss_pred HhcCCeeeeecCCCc-EEEEeCCCCCCCcEEEEcCCCccCCC-CCCCCcEEEEEEEECCCCCCHHHHHHHHHHH
Q 013163 360 AILGGTIQVPTLTGD-VVLKVRPGTQPGQKVVLKNKGIKTRN-SFSFGDQYVHFNVSIPTNLTQRQRELIEEFA 431 (448)
Q Consensus 360 AllG~~~~v~tldG~-~~l~i~~g~~~g~~~~l~g~G~p~~~-~~~~GDL~V~~~V~~P~~ls~~q~~ll~~~~ 431 (448)
|++|++++|+||||+ +.|++|+++|||++++|+|+|||..+ ++.+|||||+|+|+||++||++|+++|++++
T Consensus 106 AllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~~ 179 (181)
T 3agx_A 106 ALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 179 (181)
T ss_dssp HHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHHS
T ss_pred HhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence 999999999999995 88999999999999999999999754 4578999999999999999999999999997
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.8e-44 Score=330.31 Aligned_cols=176 Identities=23% Similarity=0.417 Sum_probs=161.3
Q ss_pred CCCccccccccchhhhhccceeeeeeeeeccCCCCCCCCCCCCCccccCcCCCCCCceEEeecceeeeEecccCCceeEE
Q 013163 199 SGQDVKVAVELSFMEAVQGCTKTVTFQTELPCEACGGEGVPPGVKPEKCRRCKGSGMESIHSGFMSINQTCRQCGGTGHI 278 (448)
Q Consensus 199 ~g~di~~~l~vsl~e~~~G~~k~i~~~~~~~C~~C~GsG~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~ 278 (448)
++.|+.+.|+|||+|+|+|+++++.+++.+.|+.
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~---------------------------------------------- 35 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH---------------------------------------------- 35 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence 4778999999999999999999999998877631
Q ss_pred EeeeccccCCCeEEecceEEEEEecCCCCCCceeEEeccCCCCCCCCCCccEEEEEEEEecccccccCcceEEEEEeCHH
Q 013163 279 ITNWCKSCKGARVVKGSKSVKLDIMPGVDNNETLKVFRSGGADPDGNQPGDLYVTIKVREDPVFRREGANIHVDSVLSVT 358 (448)
Q Consensus 279 ~~~~C~~C~G~g~v~~~k~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~ 358 (448)
+.+++.++++|+|||||++|++|+|+|+|+++..++.+|||||+|++++|+.|+|+|+|||++++||++
T Consensus 36 -----------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~ 104 (180)
T 2q2g_A 36 -----------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLV 104 (180)
T ss_dssp -----------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEEEEHH
T ss_pred -----------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEEcCHH
Confidence 345567999999999999999999999999855578999999999999999999999999999999999
Q ss_pred HHhcCCeeeeecCCCc-EEEEeCCCCCCCcEEEEcCCCccCCC-CCCCCcEEEEEEEECCCCCCHHHHHHHHHHH
Q 013163 359 QAILGGTIQVPTLTGD-VVLKVRPGTQPGQKVVLKNKGIKTRN-SFSFGDQYVHFNVSIPTNLTQRQRELIEEFA 431 (448)
Q Consensus 359 eAllG~~~~v~tldG~-~~l~i~~g~~~g~~~~l~g~G~p~~~-~~~~GDL~V~~~V~~P~~ls~~q~~ll~~~~ 431 (448)
||++|+++.|+||||+ +.|++|+++|||++++|+|+|||..+ ++.+|||||+|+|+||++||++|+++|++++
T Consensus 105 eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~~~ 179 (180)
T 2q2g_A 105 RALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL 179 (180)
T ss_dssp HHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHHHHC
T ss_pred HHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence 9999999999999995 88999999999999999999999754 3578999999999999999999999999986
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=1.1e-41 Score=310.14 Aligned_cols=168 Identities=20% Similarity=0.353 Sum_probs=152.2
Q ss_pred CccccccccchhhhhccceeeeeeeeeccCCCCCCCCCCCCCccccCcCCCCCCceEEeecceeeeEecccCCceeEEEe
Q 013163 201 QDVKVAVELSFMEAVQGCTKTVTFQTELPCEACGGEGVPPGVKPEKCRRCKGSGMESIHSGFMSINQTCRQCGGTGHIIT 280 (448)
Q Consensus 201 ~di~~~l~vsl~e~~~G~~k~i~~~~~~~C~~C~GsG~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~ 280 (448)
+|+.+.|+|||+|+|+|+++++.+++.. + .
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~----~-------------------~--------------------------- 30 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P-------------------H--------------------------- 30 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEE----T-------------------T---------------------------
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEec----C-------------------C---------------------------
Confidence 3678899999999999999999998651 0 0
Q ss_pred eeccccCCCeEEecceEEEEEecCCCCCCceeEEeccCCCCCCCCCCccEEEEEEEEecccccccCcceEEEEEeCHHHH
Q 013163 281 NWCKSCKGARVVKGSKSVKLDIMPGVDNNETLKVFRSGGADPDGNQPGDLYVTIKVREDPVFRREGANIHVDSVLSVTQA 360 (448)
Q Consensus 281 ~~C~~C~G~g~v~~~k~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eA 360 (448)
|.+ +.++++|+||||+++|++|+|+|+|++...++.+|||||+|++++|+.|+|+|+|||++++||++||
T Consensus 31 ---------G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eA 100 (170)
T 1c3g_A 31 ---------GAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKES 100 (170)
T ss_dssp ---------TEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCBHHHH
T ss_pred ---------CcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcCHHHH
Confidence 112 4689999999999999999999999977777899999999999999999999999999999999999
Q ss_pred hcCCeeeeecCCCc-EEEEeCCCCCCCcEEEEcCCCccCCC-CCCCCcEEEEEEEECCCCCCHHHHHHHH
Q 013163 361 ILGGTIQVPTLTGD-VVLKVRPGTQPGQKVVLKNKGIKTRN-SFSFGDQYVHFNVSIPTNLTQRQRELIE 428 (448)
Q Consensus 361 llG~~~~v~tldG~-~~l~i~~g~~~g~~~~l~g~G~p~~~-~~~~GDL~V~~~V~~P~~ls~~q~~ll~ 428 (448)
++|+++.|+||||+ +.|++|+++|||++++|+|+|||..+ ++.+|||||+|+|+||++||++|+++|+
T Consensus 101 llG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 101 LLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 170 (170)
T ss_dssp HHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred hCCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence 99999999999996 88999999999999999999999754 3468999999999999999999999874
No 6
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.95 E-value=6.6e-28 Score=203.18 Aligned_cols=96 Identities=32% Similarity=0.599 Sum_probs=90.9
Q ss_pred EecccccccCcceEEEEEeCHHHHhcCCeeeeecCCCcEEEEeCCCCCCCcEEEEcCCCccCCCCCCCCcEEEEEEEECC
Q 013163 337 REDPVFRREGANIHVDSVLSVTQAILGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKNKGIKTRNSFSFGDQYVHFNVSIP 416 (448)
Q Consensus 337 ~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~v~tldG~~~l~i~~g~~~g~~~~l~g~G~p~~~~~~~GDL~V~~~V~~P 416 (448)
+||+.|+|+|+||+++++|||.||++|++++|+||||.+.|+||+|+++|++++|+|+|||.. + .+|||||+|+|+||
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~~~v~ip~g~~~G~~~rl~G~G~p~~-~-~~GDL~v~~~V~~P 79 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSK-T-HTGDLFAVIKIVMP 79 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETTCSCBCS-S-CBCCEEEEEEECCC
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCCEEEeeCCCcCcCeEEEECCccCCCC-C-CCcCEEEEEEEECC
Confidence 689999999999999999999999999999999999999999999999999999999999983 3 79999999999999
Q ss_pred CCCCHHHHHHHHHHHHHh
Q 013163 417 TNLTQRQRELIEEFAKEE 434 (448)
Q Consensus 417 ~~ls~~q~~ll~~~~~~~ 434 (448)
++||++|+++|+++++..
T Consensus 80 ~~Ls~~q~~~l~~l~~~~ 97 (109)
T 3i38_A 80 TKPDEKARELWQQLAAAE 97 (109)
T ss_dssp SSCCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHhhc
Confidence 999999999999999874
No 7
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.8e-25 Score=191.89 Aligned_cols=95 Identities=23% Similarity=0.531 Sum_probs=85.2
Q ss_pred cccccCcceEEEEEeCHHHHhcCCeeeeecCCCc-EEEEeCCC--CCCCcEEEEcCCCccCCCCCCCCcEEEEEEEECCC
Q 013163 341 VFRREGANIHVDSVLSVTQAILGGTIQVPTLTGD-VVLKVRPG--TQPGQKVVLKNKGIKTRNSFSFGDQYVHFNVSIPT 417 (448)
Q Consensus 341 ~f~R~G~DL~~~~~Isl~eAllG~~~~v~tldG~-~~l~i~~g--~~~g~~~~l~g~G~p~~~~~~~GDL~V~~~V~~P~ 417 (448)
.|+|+|+||+++++|+|.||++|+++.|+||||+ +.|+||+| ++||++++|+|+|||..+.+.+|||||+|+|+||+
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~ 80 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPE 80 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCC
Confidence 4999999999999999999999999999999997 89999999 99999999999999975544789999999999999
Q ss_pred C--CCHHHHHHHHHHHHHhc
Q 013163 418 N--LTQRQRELIEEFAKEER 435 (448)
Q Consensus 418 ~--ls~~q~~ll~~~~~~~~ 435 (448)
+ ||++|+++|+++++...
T Consensus 81 ~~~ls~~q~~~l~~l~~~~~ 100 (121)
T 1xao_A 81 NHFTSEENLKKLEEILPPRI 100 (121)
T ss_dssp TTCSCHHHHHHHHHHSCCCC
T ss_pred CCCCCHHHHHHHHHHccccc
Confidence 9 99999999999987543
No 8
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.87 E-value=2.2e-23 Score=174.01 Aligned_cols=74 Identities=57% Similarity=0.927 Sum_probs=70.1
Q ss_pred ccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhccccccccccccccccccc
Q 013163 88 ARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHEAFVH 161 (448)
Q Consensus 88 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~~~~~ 161 (448)
..|||+||||+++|+.+|||+|||+|+++||||+++++++++++|++|++||++|+||.+|+.||++|++++..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 75 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ 75 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence 46899999999999999999999999999999999877889999999999999999999999999999887764
No 9
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=2.4e-22 Score=168.04 Aligned_cols=103 Identities=39% Similarity=0.745 Sum_probs=96.8
Q ss_pred CCccccccccchhhhhccceeeeeeeeeccCCCCCCCCCCCCCccccCcCCCCCCceEEeecceeeeEecccCCceeEEE
Q 013163 200 GQDVKVAVELSFMEAVQGCTKTVTFQTELPCEACGGEGVPPGVKPEKCRRCKGSGMESIHSGFMSINQTCRQCGGTGHII 279 (448)
Q Consensus 200 g~di~~~l~vsl~e~~~G~~k~i~~~~~~~C~~C~GsG~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~ 279 (448)
|.|+.++|+|+|+|+|+|+++++.+++.+.|+.|+|+|..++..+.+|+.|+|+|++...+|+|+++.+|+.|+|.|+++
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i 80 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSII 80 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEEC
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceEC
Confidence 45788999999999999999999999999999999999999988999999999999887779999999999999999999
Q ss_pred eeeccccCCCeEEecceEEEEEe
Q 013163 280 TNWCKSCKGARVVKGSKSVKLDI 302 (448)
Q Consensus 280 ~~~C~~C~G~g~v~~~k~l~V~I 302 (448)
+++|+.|+|.+.+++.++|+|+|
T Consensus 81 ~~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 81 ISPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp SSCCSSSSSCSEECCCCSSCCSC
T ss_pred CCcCCCCCCeeEEEEEEEEEEEc
Confidence 99999999999999999888765
No 10
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=7.3e-22 Score=156.75 Aligned_cols=72 Identities=60% Similarity=0.959 Sum_probs=68.3
Q ss_pred CCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhccccccccccccccc
Q 013163 86 MSARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHE 157 (448)
Q Consensus 86 ~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~ 157 (448)
....|||+||||+++|+.+|||+|||+|+++||||+++++++++++|++|++||++|+||.+|+.||.+|..
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 75 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSG 75 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCc
Confidence 456899999999999999999999999999999999998888999999999999999999999999999864
No 11
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=1.4e-21 Score=158.41 Aligned_cols=75 Identities=52% Similarity=0.869 Sum_probs=70.1
Q ss_pred CCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhccccccccccccccccccc
Q 013163 86 MSARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHEAFVH 161 (448)
Q Consensus 86 ~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~~~~~ 161 (448)
....|||+||||+++|+.+|||+|||+|+++||||+++ +++++++|++|++||++|+||.+|+.||.+|+.++..
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 78 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTS 78 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTC
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccc
Confidence 45689999999999999999999999999999999998 5889999999999999999999999999999877653
No 12
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.84 E-value=9.3e-22 Score=155.38 Aligned_cols=73 Identities=45% Similarity=0.843 Sum_probs=68.0
Q ss_pred CccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhcccccccccccccccccc
Q 013163 87 SARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHEAFV 160 (448)
Q Consensus 87 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~~~~ 160 (448)
|..|||+||||+++|+.+|||+|||+|+++||||++++ +.++++|++|++||++|+||.+|+.||++|.+++.
T Consensus 1 m~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 73 (77)
T 1hdj_A 1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK 73 (77)
T ss_dssp CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccc
Confidence 35799999999999999999999999999999999974 67899999999999999999999999999987654
No 13
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=2.5e-21 Score=160.32 Aligned_cols=71 Identities=41% Similarity=0.586 Sum_probs=67.0
Q ss_pred CCCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhccccccccccccc
Q 013163 85 SMSARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVG 155 (448)
Q Consensus 85 ~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g 155 (448)
.+...|||+||||+++|+.+|||+|||+|+++||||+++++++++++|++|++||++|+||.+|+.||++.
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 46678999999999999999999999999999999999888899999999999999999999999999854
No 14
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=2.9e-21 Score=157.82 Aligned_cols=76 Identities=51% Similarity=0.824 Sum_probs=69.6
Q ss_pred CCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHhhhccccccccccccccccccc
Q 013163 86 MSARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDD-PEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHEAFVH 161 (448)
Q Consensus 86 ~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~~~~~ 161 (448)
....|||+||||+++|+.+|||+|||+|+++||||+++.+ ++++++|++|++||++|+||.+|+.||++|.+++..
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 3457999999999999999999999999999999999865 478999999999999999999999999999877654
No 15
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=3e-21 Score=154.33 Aligned_cols=73 Identities=48% Similarity=0.806 Sum_probs=67.2
Q ss_pred CCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHhhhcccccccccccccccc
Q 013163 86 MSARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDD-PEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHEA 158 (448)
Q Consensus 86 ~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~~ 158 (448)
....|||+||||+++|+.+|||+|||+|+++||||+++.+ ++++++|++|++||++|+||.+|+.||++|..+
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 79 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP 79 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 4457999999999999999999999999999999999865 368899999999999999999999999999654
No 16
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=3.5e-21 Score=163.07 Aligned_cols=74 Identities=30% Similarity=0.553 Sum_probs=69.5
Q ss_pred CCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhccccccccccccccccc
Q 013163 86 MSARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHEAF 159 (448)
Q Consensus 86 ~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~~~ 159 (448)
....|||+||||+++|+.+|||+|||+|+++||||+++++++++++|++|++||++|+||.+|+.||++|.+++
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 44689999999999999999999999999999999999878999999999999999999999999999997654
No 17
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=5.7e-21 Score=160.97 Aligned_cols=76 Identities=47% Similarity=0.770 Sum_probs=71.2
Q ss_pred CCCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhcccccccccccccccccc
Q 013163 85 SMSARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHEAFV 160 (448)
Q Consensus 85 ~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~~~~ 160 (448)
+....|||+||||+++|+.+|||+|||+|+++||||+++++++++++|++|++||++|+||.+|+.||++|..++.
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 4556899999999999999999999999999999999998889999999999999999999999999999987654
No 18
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=5.5e-21 Score=154.90 Aligned_cols=72 Identities=51% Similarity=0.821 Sum_probs=67.1
Q ss_pred CCCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhccccccccccccccc
Q 013163 85 SMSARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHE 157 (448)
Q Consensus 85 ~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~ 157 (448)
.....|||+||||+++|+.+|||+|||+|+++||||++++ +.++++|++|++||++|+||.+|+.||.+|+.
T Consensus 13 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 13 SALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp CSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred ccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 3456899999999999999999999999999999999985 77899999999999999999999999999864
No 19
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.82 E-value=3.7e-21 Score=157.17 Aligned_cols=72 Identities=44% Similarity=0.718 Sum_probs=66.4
Q ss_pred CccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhccccccccccccccccccc
Q 013163 87 SARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHEAFVH 161 (448)
Q Consensus 87 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~~~~~ 161 (448)
+..|||+||||+++|+.+|||+|||+|+++||||+++++ .++|++|++||++|+||.+|+.||++|.++...
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 77 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEAARS 77 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHT
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhc
Confidence 457999999999999999999999999999999999765 458999999999999999999999999887664
No 20
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=5.4e-21 Score=151.35 Aligned_cols=72 Identities=46% Similarity=0.789 Sum_probs=67.0
Q ss_pred CCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhcccccccccccccccc
Q 013163 86 MSARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHEA 158 (448)
Q Consensus 86 ~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~~ 158 (448)
....|||+||||+++|+.+|||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|+.||++|..+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA-PGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS-HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 456899999999999999999999999999999999974 789999999999999999999999999998643
No 21
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.81 E-value=1.1e-20 Score=156.36 Aligned_cols=73 Identities=49% Similarity=0.799 Sum_probs=65.4
Q ss_pred cCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHhhhccccccccccccccccccc
Q 013163 89 RDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDD-PEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHEAFVH 161 (448)
Q Consensus 89 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~~~~~ 161 (448)
.|||+||||+++|+.+|||+|||+|+++||||+++++ +.++++|++|++||++|+||.+|+.||.+|.+++..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 5899999999999999999999999999999999865 468899999999999999999999999999877654
No 22
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.81 E-value=1.5e-20 Score=146.88 Aligned_cols=68 Identities=51% Similarity=0.895 Sum_probs=61.9
Q ss_pred CccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhccccccccccccccc
Q 013163 87 SARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHE 157 (448)
Q Consensus 87 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~ 157 (448)
...|||+||||+++|+.++||+|||+|+++||||+++++ .++|++|++||++|+||.+|+.||++|++
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 357999999999999999999999999999999999753 57899999999999999999999999863
No 23
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.80 E-value=2.1e-20 Score=153.18 Aligned_cols=73 Identities=30% Similarity=0.579 Sum_probs=66.1
Q ss_pred CCCCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hHHHHHHHHHHHHHhhhcccccccccccccc
Q 013163 84 ASMSARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDD------PEAEKKFQEVSKAYEVLKDDEKRSVYDQVGH 156 (448)
Q Consensus 84 ~~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~ 156 (448)
..+...|||+||||+++|+.+|||+|||+|+++||||+++.+ +.++++|++|++||++|+||.+|+.||.+..
T Consensus 11 ~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 11 EQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred ccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 345678999999999999999999999999999999998743 5688999999999999999999999998653
No 24
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.77 E-value=8.1e-20 Score=170.63 Aligned_cols=73 Identities=42% Similarity=0.810 Sum_probs=69.2
Q ss_pred cCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhccccccccccccccccccc
Q 013163 89 RDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHEAFVH 161 (448)
Q Consensus 89 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~~~~~ 161 (448)
.|||+||||+++|+.+|||+|||+|+++||||+++++++++++|++|++||++|+||.+|+.||++|.+++..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~ 74 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 74 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccc
Confidence 5899999999999999999999999999999999888899999999999999999999999999999877653
No 25
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.75 E-value=2.9e-19 Score=150.55 Aligned_cols=71 Identities=41% Similarity=0.634 Sum_probs=65.7
Q ss_pred CCccCchhhcCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---ChHHHHHHHHHHHHHhhhcccccccccccccc
Q 013163 86 MSARDYYDVLGVNKNA-TASEIKKAYYGLAKKLHPDTNKD---DPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGH 156 (448)
Q Consensus 86 ~~~~d~y~iLgv~~~a-~~~eIk~ayr~la~~~HPD~~~~---~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~ 156 (448)
....|||+||||+++| +.+|||+|||+|+++||||++++ .+.++++|++|++||++|+||.+|+.||+++.
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 3468999999999999 99999999999999999999875 35688999999999999999999999999885
No 26
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=2.6e-18 Score=139.62 Aligned_cols=62 Identities=37% Similarity=0.549 Sum_probs=58.5
Q ss_pred ccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhcccccccc
Q 013163 88 ARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSV 150 (448)
Q Consensus 88 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~ 150 (448)
..|||+||||+++|+.+|||+|||+|+++||||++++ +.++++|++|++||++|+||.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-PGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCcccccC
Confidence 4799999999999999999999999999999999984 7788999999999999999999975
No 27
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.72 E-value=3.1e-18 Score=153.19 Aligned_cols=72 Identities=32% Similarity=0.612 Sum_probs=65.5
Q ss_pred CCCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh------HHHHHHHHHHHHHhhhcccccccccccccc
Q 013163 85 SMSARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDP------EAEKKFQEVSKAYEVLKDDEKRSVYDQVGH 156 (448)
Q Consensus 85 ~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~------~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~ 156 (448)
.+...|||+||||+++|+.++||+|||+|+++||||+++.++ .|.++|++|++||++|+||.+|+.||.++.
T Consensus 6 ~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 6 QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred cCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 355689999999999999999999999999999999988653 377999999999999999999999998764
No 28
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.71 E-value=5.1e-18 Score=137.05 Aligned_cols=68 Identities=21% Similarity=0.196 Sum_probs=60.7
Q ss_pred CCCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHhhhcccccccccc
Q 013163 85 SMSARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDD-PEAEKKFQEVSKAYEVLKDDEKRSVYD 152 (448)
Q Consensus 85 ~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~yd 152 (448)
.+...++|+||||+++|+.+|||+|||+|+++||||+++++ ++|+++|++|++||++|+|...|..+.
T Consensus 12 ~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~~ 80 (88)
T 1iur_A 12 GSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQNA 80 (88)
T ss_dssp SSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSSS
T ss_pred CccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 35568999999999999999999999999999999999877 458999999999999999998884443
No 29
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.70 E-value=1.7e-18 Score=146.52 Aligned_cols=65 Identities=28% Similarity=0.498 Sum_probs=60.6
Q ss_pred ccCchhhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhcccccccccccccc
Q 013163 88 ARDYYDVLGVNKNATA--SEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGH 156 (448)
Q Consensus 88 ~~d~y~iLgv~~~a~~--~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~ 156 (448)
..+||+||||+++|+. ++||+|||+||++||||++++ +++|++|++||++|+||.+|+.||.+|.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4689999999999999 999999999999999999874 4689999999999999999999999874
No 30
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.69 E-value=8.1e-18 Score=133.31 Aligned_cols=67 Identities=18% Similarity=0.317 Sum_probs=59.4
Q ss_pred ccCchhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhccccccccccccccccc
Q 013163 88 ARDYYDVLGVNKN--ATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHEAF 159 (448)
Q Consensus 88 ~~d~y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~~~ 159 (448)
..++|+||||+++ |+.+|||+|||+|+++||||++++ .++|++|++||++|+|+.+|.. +.||.+++
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~~ 78 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLR-MNLGGTGF 78 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHT-TCCSSCCC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHH-HhcCCccC
Confidence 3689999999999 999999999999999999999863 4689999999999999999988 55776543
No 31
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.67 E-value=3.9e-18 Score=154.07 Aligned_cols=65 Identities=28% Similarity=0.491 Sum_probs=58.0
Q ss_pred ccCchhhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhcccccccccccccc
Q 013163 88 ARDYYDVLGVNKNAT--ASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGH 156 (448)
Q Consensus 88 ~~d~y~iLgv~~~a~--~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~ 156 (448)
..|||+||||+++|+ .+|||+|||+||+++|||++++ +++|++|++||++|+||.+|+.||+||.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 478999999999998 6999999999999999999875 3689999999999999999999999995
No 32
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.65 E-value=2.6e-17 Score=133.41 Aligned_cols=56 Identities=21% Similarity=0.381 Sum_probs=52.2
Q ss_pred cCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHHHHHHHhhhcc
Q 013163 89 RDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDP---EAEKKFQEVSKAYEVLKD 144 (448)
Q Consensus 89 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~---~a~~~f~~i~~Ay~~L~d 144 (448)
.++|++|||+++||.+|||+|||++|++||||+|++++ .|+++|++|++||++|.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999998765 388999999999999986
No 33
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.65 E-value=5.2e-17 Score=147.82 Aligned_cols=68 Identities=26% Similarity=0.462 Sum_probs=61.9
Q ss_pred ccCchhhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHhhhccccccccccccc
Q 013163 88 ARDYYDVLGVNKNAT--ASEIKKAYYGLAKKLHPDTNKDDPE-----AEKKFQEVSKAYEVLKDDEKRSVYDQVG 155 (448)
Q Consensus 88 ~~d~y~iLgv~~~a~--~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~R~~yd~~g 155 (448)
..|||+||||+++++ .++||+|||+|+++||||++++.++ |.++|+.|++||++|+||.+|+.||...
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 469999999999998 9999999999999999999887654 6789999999999999999999999744
No 34
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.64 E-value=5.3e-17 Score=147.51 Aligned_cols=63 Identities=22% Similarity=0.456 Sum_probs=59.5
Q ss_pred cCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH---HHHHHHHHHHHHhhhccccccccc
Q 013163 89 RDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDPE---AEKKFQEVSKAYEVLKDDEKRSVY 151 (448)
Q Consensus 89 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~---a~~~f~~i~~Ay~~L~d~~~R~~y 151 (448)
.|||++|||+++|+.+|||+|||+|+++||||++++.+. |+++|++|++||++|+|+.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 699999999999999999999999999999999986543 889999999999999999999988
No 35
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.62 E-value=9.6e-17 Score=145.58 Aligned_cols=66 Identities=18% Similarity=0.373 Sum_probs=61.1
Q ss_pred CchhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHhhhccccccccccccc
Q 013163 90 DYYDVLGVNKNA--TASEIKKAYYGLAKKLHPDTNKDDPE-----AEKKFQEVSKAYEVLKDDEKRSVYDQVG 155 (448)
Q Consensus 90 d~y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~R~~yd~~g 155 (448)
|||++|||++++ +.++||+|||+|+++||||+++++++ |.++|+.|++||++|+||.+|+.||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 799999999999 99999999999999999999987643 5679999999999999999999999864
No 36
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.61 E-value=4.7e-17 Score=180.05 Aligned_cols=76 Identities=41% Similarity=0.769 Sum_probs=40.9
Q ss_pred CCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhccccccccccccccccccc
Q 013163 86 MSARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVGHEAFVH 161 (448)
Q Consensus 86 ~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g~~~~~~ 161 (448)
....|||+||||+++||.+|||+|||+||++||||+++++++++++|++|++||++|+||.+|+.||+||++++..
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~ 93 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 93 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence 4568999999999999999999999999999999999878899999999999999999999999999999887654
No 37
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.61 E-value=2.5e-16 Score=146.95 Aligned_cols=66 Identities=26% Similarity=0.487 Sum_probs=60.1
Q ss_pred ccCchhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHhhhccccccccccc
Q 013163 88 ARDYYDVLGVNKN--ATASEIKKAYYGLAKKLHPDTNKDDPE-----AEKKFQEVSKAYEVLKDDEKRSVYDQ 153 (448)
Q Consensus 88 ~~d~y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~R~~yd~ 153 (448)
..|||++|||+++ ++.++||+|||+|+++||||+++++++ |.++|++|++||++|+||.+|+.||.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 5799999999986 799999999999999999999986532 56789999999999999999999995
No 38
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.60 E-value=4.8e-16 Score=120.54 Aligned_cols=60 Identities=15% Similarity=0.251 Sum_probs=53.4
Q ss_pred CCccCchhhcCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhccccccc
Q 013163 86 MSARDYYDVLGVNK-NATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRS 149 (448)
Q Consensus 86 ~~~~d~y~iLgv~~-~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 149 (448)
+...++|+||||++ +|+.+|||+|||+|+++||||++. + .++|++|++||++|+|+..|+
T Consensus 11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g-~---~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG-S---PFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC-C---HHHHHHHHHHHHHHHHHCCCC
T ss_pred CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-C---HHHHHHHHHHHHHHhhhhhcC
Confidence 45579999999999 799999999999999999999974 3 358999999999999988763
No 39
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.59 E-value=2.2e-16 Score=131.84 Aligned_cols=58 Identities=21% Similarity=0.302 Sum_probs=52.1
Q ss_pred ccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---Ch----HHHHHHHHHHHHHhhhcccc
Q 013163 88 ARDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKD---DP----EAEKKFQEVSKAYEVLKDDE 146 (448)
Q Consensus 88 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~---~~----~a~~~f~~i~~Ay~~L~d~~ 146 (448)
..|||+|||++. ||.+|||+|||+||++||||+|++ ++ .|+++|++|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 479999999996 999999999999999999999863 22 47899999999999999986
No 40
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.54 E-value=8.1e-16 Score=140.56 Aligned_cols=67 Identities=24% Similarity=0.403 Sum_probs=60.1
Q ss_pred CCccCchhhc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhccccccccccccc
Q 013163 86 MSARDYYDVL------GVNK-NATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDDEKRSVYDQVG 155 (448)
Q Consensus 86 ~~~~d~y~iL------gv~~-~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yd~~g 155 (448)
....|||+|| |+++ +|+.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.||...
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 3457999999 4665 9999999999999999999999975 6778999999999999999999999844
No 41
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=99.52 E-value=7.8e-15 Score=116.00 Aligned_cols=78 Identities=37% Similarity=0.891 Sum_probs=71.4
Q ss_pred cceeeeeeeeeccCCCCCCCCCCCCCccccCcCCCCCCceEEeecceeeeEecccCCceeEEEeeeccccCCCeEEec
Q 013163 217 GCTKTVTFQTELPCEACGGEGVPPGVKPEKCRRCKGSGMESIHSGFMSINQTCRQCGGTGHIITNWCKSCKGARVVKG 294 (448)
Q Consensus 217 G~~k~i~~~~~~~C~~C~GsG~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~ 294 (448)
|++++|.+++.+.|+.|+|+|..++....+|+.|+|+|+++...|+++++.+|+.|+|.|++++++|+.|+|.+.+.+
T Consensus 1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~~~ 78 (79)
T 1exk_A 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVER 78 (79)
T ss_dssp CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECSSBCGGGTTSSEEEC
T ss_pred CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEECCCcCCCCCCeEEEee
Confidence 567889999999999999999988877889999999999876669999899999999999999999999999998864
No 42
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.23 E-value=1.3e-11 Score=118.36 Aligned_cols=117 Identities=21% Similarity=0.379 Sum_probs=76.1
Q ss_pred eccCCCCCCCCCCC-----C----CccccCcCCCCCCceEEeecceeeeEecccCCceeEEEe-------eeccccCCCe
Q 013163 227 ELPCEACGGEGVPP-----G----VKPEKCRRCKGSGMESIHSGFMSINQTCRQCGGTGHIIT-------NWCKSCKGAR 290 (448)
Q Consensus 227 ~~~C~~C~GsG~~~-----~----~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~-------~~C~~C~G~g 290 (448)
...|+.|+|+|... + ....+|+.|+|+|.++ ....+|+.|+|.|.+.. .+--.-.|..
T Consensus 54 ~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i------~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ 127 (248)
T 1nlt_A 54 VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDII------DPKDRCKSCNGKKVENERKILEVHVEPGMKDGQR 127 (248)
T ss_dssp CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCC------CTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCE
T ss_pred CccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEe------ccCCCCcccCCCceEeeeEEEEEEECCCccCCCE
Confidence 37899999999641 1 1356899999999765 22568999999986542 1111111111
Q ss_pred EE------------------------------------------------------e--cceEEEEEecCC--CCCCcee
Q 013163 291 VV------------------------------------------------------K--GSKSVKLDIMPG--VDNNETL 312 (448)
Q Consensus 291 ~v------------------------------------------------------~--~~k~l~V~Ip~G--~~~G~~i 312 (448)
+. . ..+.++|.|||| +++|+++
T Consensus 128 ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~ 207 (248)
T 1nlt_A 128 IVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRK 207 (248)
T ss_dssp EEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEE
T ss_pred EEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEE
Confidence 11 1 112578889999 9999999
Q ss_pred EEeccCCCCCCCCCCccEEEEEEEEeccc--ccccCcce
Q 013163 313 KVFRSGGADPDGNQPGDLYVTIKVREDPV--FRREGANI 349 (448)
Q Consensus 313 ~~~g~G~~~~~g~~~GDL~v~i~v~~h~~--f~R~G~DL 349 (448)
+|+|+|.+...+...|||||+|+|.-+.. +..+...|
T Consensus 208 rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~ 246 (248)
T 1nlt_A 208 VIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKK 246 (248)
T ss_dssp EETTCSCBCSSSCSBCCEEEEEEEECCC-----------
T ss_pred EEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHh
Confidence 99999998765446799999999997776 66555443
No 43
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.94 E-value=4.3e-10 Score=113.50 Aligned_cols=65 Identities=49% Similarity=0.776 Sum_probs=56.0
Q ss_pred cCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---hHHHHHHHHHHHHHhhhccccccccccc
Q 013163 89 RDYYDVLGVNKNATASEIKKAYYGLAKKLHPDTNKDD---PEAEKKFQEVSKAYEVLKDDEKRSVYDQ 153 (448)
Q Consensus 89 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~---~~a~~~f~~i~~Ay~~L~d~~~R~~yd~ 153 (448)
.++|++||+.+.++.++|+++|+++++++|||+.+.+ ++++++|++|.+||++|+||++|..||+
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 4899999999999999999999999999999998754 3488999999999999999999999996
No 44
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=98.76 E-value=3.7e-09 Score=88.47 Aligned_cols=81 Identities=22% Similarity=0.369 Sum_probs=65.2
Q ss_pred cCCCccccccccchhhhhccceeeeeeeeeccCCCCCCCCCCCCCccccCcCCCCCCceEEeecceeeeEecccCCceeE
Q 013163 198 MSGQDVKVAVELSFMEAVQGCTKTVTFQTELPCEACGGEGVPPGVKPEKCRRCKGSGMESIHSGFMSINQTCRQCGGTGH 277 (448)
Q Consensus 198 ~~g~di~~~l~vsl~e~~~G~~k~i~~~~~~~C~~C~GsG~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~ 277 (448)
+.|.|+...+.|+|.||+.|+++++..-
T Consensus 9 R~G~DL~~~~~Isl~eAl~G~~i~v~tl---------------------------------------------------- 36 (109)
T 3i38_A 9 IVGHNLEIVLPLAPWEAALGAKVTVPTL---------------------------------------------------- 36 (109)
T ss_dssp EETTEEEEEEEECHHHHHHCEEEEECCS----------------------------------------------------
T ss_pred EECCEEEEEEEcCHHHHhCCCEEEEEcC----------------------------------------------------
Confidence 3678999999999999999987665421
Q ss_pred EEeeeccccCCCeEEecceEEEEEecCCCCCCceeEEeccCCCCCCCCCCccEEEEEEEEecccccccCcce
Q 013163 278 IITNWCKSCKGARVVKGSKSVKLDIMPGVDNNETLKVFRSGGADPDGNQPGDLYVTIKVREDPVFRREGANI 349 (448)
Q Consensus 278 ~~~~~C~~C~G~g~v~~~k~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL 349 (448)
.+ .++|.||+|+++|++++++|+|.+.. +.+|||||+|+|.-+..+..+..++
T Consensus 37 ----------------dG-~~~v~ip~g~~~G~~~rl~G~G~p~~--~~~GDL~v~~~V~~P~~Ls~~q~~~ 89 (109)
T 3i38_A 37 ----------------KE-SILLTVPPGSQAGQRLRIKGKGLVSK--THTGDLFAVIKIVMPTKPDEKAREL 89 (109)
T ss_dssp ----------------SS-CEEEEECTTCCTTCEEEETTCSCBCS--SCBCCEEEEEEECCCSSCCHHHHHH
T ss_pred ----------------CC-CEEEeeCCCcCcCeEEEECCccCCCC--CCCcCEEEEEEEECCCCCCHHHHHH
Confidence 01 36899999999999999999999873 3789999999999887666554443
No 45
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.73 E-value=7.2e-09 Score=88.34 Aligned_cols=84 Identities=17% Similarity=0.250 Sum_probs=64.1
Q ss_pred cCCCccccccccchhhhhccceeeeeeeeeccCCCCCCCCCCCCCccccCcCCCCCCceEEeecceeeeEecccCCceeE
Q 013163 198 MSGQDVKVAVELSFMEAVQGCTKTVTFQTELPCEACGGEGVPPGVKPEKCRRCKGSGMESIHSGFMSINQTCRQCGGTGH 277 (448)
Q Consensus 198 ~~g~di~~~l~vsl~e~~~G~~k~i~~~~~~~C~~C~GsG~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~ 277 (448)
+.|.|+.+.+.|+|.||+.|++..+..-
T Consensus 4 R~G~DL~~~~~Isl~eAllG~~i~v~tl---------------------------------------------------- 31 (121)
T 1xao_A 4 RDGDDLVYEAEIDLLTAIAGGEFALEHV---------------------------------------------------- 31 (121)
T ss_dssp EETTEEEEEEEEEHHHHHHCEEEEEECT----------------------------------------------------
T ss_pred EECCeEEEEEEcCHHHHhCCCEEEEecC----------------------------------------------------
Confidence 3578999999999999999987665310
Q ss_pred EEeeeccccCCCeEEecceEEEEEecCC--CCCCceeEEeccCCCCCCCCCCccEEEEEEEEeccc--ccccCcce
Q 013163 278 IITNWCKSCKGARVVKGSKSVKLDIMPG--VDNNETLKVFRSGGADPDGNQPGDLYVTIKVREDPV--FRREGANI 349 (448)
Q Consensus 278 ~~~~~C~~C~G~g~v~~~k~l~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~--f~R~G~DL 349 (448)
.++.++|.|||| +++|++++++|+|.+...+...|||||+++|.-+.. +..+..++
T Consensus 32 ----------------dG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~~~ 91 (121)
T 1xao_A 32 ----------------SGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKK 91 (121)
T ss_dssp ----------------TSCEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHHHH
T ss_pred ----------------CCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH
Confidence 134678999999 999999999999998765446899999999998776 66655443
No 46
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.68 E-value=1.3e-08 Score=76.83 Aligned_cols=53 Identities=15% Similarity=0.135 Sum_probs=45.4
Q ss_pred cCchhhcCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhhhccc
Q 013163 89 RDYYDVLGVNKN---ATASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEVLKDD 145 (448)
Q Consensus 89 ~d~y~iLgv~~~---a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~ 145 (448)
.+.|.||||+++ ++.++|+++||+|....|||+..+ + -...+|++|++.|...
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS-~---yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS-F---YLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC-H---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC-H---HHHHHHHHHHHHHHHH
Confidence 467999999999 999999999999999999999753 2 3467899999998643
No 47
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.61 E-value=6.7e-08 Score=87.20 Aligned_cols=75 Identities=16% Similarity=0.245 Sum_probs=62.7
Q ss_pred ceEEEEEeCHHHHhcCCeeeeecC----CC-----cEEEEeCCCCCCCcEEEEcCCCccCCCCCCCCcEEEEEEEECCCC
Q 013163 348 NIHVDSVLSVTQAILGGTIQVPTL----TG-----DVVLKVRPGTQPGQKVVLKNKGIKTRNSFSFGDQYVHFNVSIPTN 418 (448)
Q Consensus 348 DL~~~~~Isl~eAllG~~~~v~tl----dG-----~~~l~i~~g~~~g~~~~l~g~G~p~~~~~~~GDL~V~~~V~~P~~ 418 (448)
|+.+++.|||.||+.|.+++|..- +| .+.|+||+|+..|++++++|+|-+...++..|||||+++|.-.+.
T Consensus 2 d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~ 81 (170)
T 1c3g_A 2 TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPN 81 (170)
T ss_dssp EEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSS
T ss_pred CEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCc
Confidence 789999999999999999877643 12 367999999999999999999987656667899999999986665
Q ss_pred CCHH
Q 013163 419 LTQR 422 (448)
Q Consensus 419 ls~~ 422 (448)
++.+
T Consensus 82 F~R~ 85 (170)
T 1c3g_A 82 FKRD 85 (170)
T ss_dssp EEEE
T ss_pred cEEe
Confidence 5433
No 48
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.60 E-value=3.5e-08 Score=98.19 Aligned_cols=76 Identities=16% Similarity=0.286 Sum_probs=53.8
Q ss_pred cCcceEEEEEeCHHHHhcCCeeeeecC------C--------CcEEEEeCCCCCCCcEEEEcCCCccCCCCCCCCcEEEE
Q 013163 345 EGANIHVDSVLSVTQAILGGTIQVPTL------T--------GDVVLKVRPGTQPGQKVVLKNKGIKTRNSFSFGDQYVH 410 (448)
Q Consensus 345 ~G~DL~~~~~Isl~eAllG~~~~v~tl------d--------G~~~l~i~~g~~~g~~~~l~g~G~p~~~~~~~GDL~V~ 410 (448)
.|.||.+++.|+|.||..|.+..|..- . ..+.|+||||+++|++++|+|+|.|..+++..|||||+
T Consensus 139 ~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~v~ 218 (329)
T 3lz8_A 139 RGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLV 218 (329)
T ss_dssp CCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEEEE
T ss_pred CCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEEEE
Confidence 455666666666666666654333221 1 24679999999999999999999997666678999999
Q ss_pred EEEECCCCCC
Q 013163 411 FNVSIPTNLT 420 (448)
Q Consensus 411 ~~V~~P~~ls 420 (448)
|+|.-...+.
T Consensus 219 I~v~~h~~F~ 228 (329)
T 3lz8_A 219 IHIAPHPLFD 228 (329)
T ss_dssp ECCCCCSSCE
T ss_pred EEEecCCccE
Confidence 9988666554
No 49
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.59 E-value=8.9e-08 Score=87.21 Aligned_cols=77 Identities=17% Similarity=0.260 Sum_probs=62.8
Q ss_pred CcceEEEEEeCHHHHhcCCeeeeecC------------CCcEEEEeCCCCCCCcEEEEcCCCccCCCCCCCCcEEEEEEE
Q 013163 346 GANIHVDSVLSVTQAILGGTIQVPTL------------TGDVVLKVRPGTQPGQKVVLKNKGIKTRNSFSFGDQYVHFNV 413 (448)
Q Consensus 346 G~DL~~~~~Isl~eAllG~~~~v~tl------------dG~~~l~i~~g~~~g~~~~l~g~G~p~~~~~~~GDL~V~~~V 413 (448)
|.|+.+++.|||.||..|.+.+|..- ...+.|+||+|+..|++++++|+|-+...++..|||||.++|
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~ 82 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQT 82 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEE
Confidence 67999999999999999998777642 124679999999999999999999874345678999999999
Q ss_pred ECCCCCCHH
Q 013163 414 SIPTNLTQR 422 (448)
Q Consensus 414 ~~P~~ls~~ 422 (448)
.-...+..+
T Consensus 83 ~~h~~F~R~ 91 (180)
T 2q2g_A 83 KTHPRFTRD 91 (180)
T ss_dssp CCCSSCEEE
T ss_pred EecccEEEc
Confidence 866655433
No 50
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.49 E-value=1.9e-07 Score=85.05 Aligned_cols=76 Identities=17% Similarity=0.192 Sum_probs=59.5
Q ss_pred CcceEEEEEeCHHHHhcCCeeeeecC------CC--------cEEEEeCCCCCCCcEEEEcCCCccCCCCCCCCcEEEEE
Q 013163 346 GANIHVDSVLSVTQAILGGTIQVPTL------TG--------DVVLKVRPGTQPGQKVVLKNKGIKTRNSFSFGDQYVHF 411 (448)
Q Consensus 346 G~DL~~~~~Isl~eAllG~~~~v~tl------dG--------~~~l~i~~g~~~g~~~~l~g~G~p~~~~~~~GDL~V~~ 411 (448)
+.|+.+++.|||.||..|.+.+|..- .| .+.|+||+|+..|++++++|+|-+..+ +..|||||.+
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~-g~~GDl~v~i 80 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSN-NIPADIVFVL 80 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSS-SCCCCEEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCC-CCcccEEEEE
Confidence 56899999999999999998777532 23 256899999999999999999998653 5689999999
Q ss_pred EEECCCCCCHH
Q 013163 412 NVSIPTNLTQR 422 (448)
Q Consensus 412 ~V~~P~~ls~~ 422 (448)
+|.-...+..+
T Consensus 81 ~~~~h~~F~R~ 91 (181)
T 3agx_A 81 KDKPHNIFKRD 91 (181)
T ss_dssp EECCCSSCEEE
T ss_pred EEeccccceee
Confidence 99876666543
No 51
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.77 E-value=5.5e-06 Score=68.42 Aligned_cols=46 Identities=35% Similarity=0.728 Sum_probs=36.8
Q ss_pred eccCCCCCCCCCCC-----CCccccCcCCCCCCceEEeecceeeeEecccCCceeEEEe
Q 013163 227 ELPCEACGGEGVPP-----GVKPEKCRRCKGSGMESIHSGFMSINQTCRQCGGTGHIIT 280 (448)
Q Consensus 227 ~~~C~~C~GsG~~~-----~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~ 280 (448)
...|+.|+|+|... .....+|+.|+|+|.++ ..+|+.|+|.|.+..
T Consensus 45 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i--------~~~C~~C~G~G~v~~ 95 (104)
T 2ctt_A 45 VQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSII--------ISPCVVCRGAGQAKQ 95 (104)
T ss_dssp CEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEEC--------SSCCSSSSSCSEECC
T ss_pred CccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceEC--------CCcCCCCCCeeEEEE
Confidence 46899999999542 12346899999999876 578999999998764
No 52
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.63 E-value=1.2e-05 Score=57.82 Aligned_cols=32 Identities=28% Similarity=0.686 Sum_probs=26.8
Q ss_pred eeeEecccCCceeEEEeeeccccCCCeEEecc
Q 013163 264 SINQTCRQCGGTGHIITNWCKSCKGARVVKGS 295 (448)
Q Consensus 264 ~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~ 295 (448)
+++.+|+.|+|+|+++..+|+.|+|.|.+.+.
T Consensus 7 q~~~~C~~C~GsG~~i~~~C~~C~G~G~v~~~ 38 (53)
T 3lcz_A 7 DLETTCPNCNGSGREEPEPCPKCLGKGVILTA 38 (53)
T ss_dssp HHEEECTTTTTSCEETTEECTTTTTSSEEECH
T ss_pred ceeccCcCCcccccCCCCcCCCCCCcEEEEEE
Confidence 45788999999999988999999999887654
No 53
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=97.60 E-value=2.1e-06 Score=92.09 Aligned_cols=74 Identities=16% Similarity=0.221 Sum_probs=58.7
Q ss_pred ccccccchhhhhccceeeeeeeeeccCCCCCCCCCCCCC---ccccCcCCCCCCceE------------Eeecce-eeeE
Q 013163 204 KVAVELSFMEAVQGCTKTVTFQTELPCEACGGEGVPPGV---KPEKCRRCKGSGMES------------IHSGFM-SINQ 267 (448)
Q Consensus 204 ~~~l~vsl~e~~~G~~k~i~~~~~~~C~~C~GsG~~~~~---~~~~C~~C~G~G~~~------------~~~g~~-~~~~ 267 (448)
.+.++++|+|++.|.++++.+.+...|+.|+|+|..++. .+.+|+.|+|+.... .+.|.| +...
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~ 247 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS 247 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence 467899999999999999999999999999999999987 688999999994221 012322 3345
Q ss_pred ecccCCceeE
Q 013163 268 TCRQCGGTGH 277 (448)
Q Consensus 268 ~C~~C~G~G~ 277 (448)
.|..|+..+.
T Consensus 248 ~C~~CH~~~~ 257 (669)
T 3pmq_A 248 NCQTCHADNP 257 (669)
T ss_dssp CCTTTSCCCT
T ss_pred cchhhcCCcc
Confidence 7888888764
No 54
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=97.51 E-value=5.9e-05 Score=58.75 Aligned_cols=46 Identities=33% Similarity=0.749 Sum_probs=27.4
Q ss_pred ccccCcCCCCCCceEEeecceeeeEecccCCceeEEEe--------eeccccCCCeEEe
Q 013163 243 KPEKCRRCKGSGMESIHSGFMSINQTCRQCGGTGHIIT--------NWCKSCKGARVVK 293 (448)
Q Consensus 243 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~--------~~C~~C~G~g~v~ 293 (448)
+..+|+.|+|+|... .+...+|+.|+|+|+++. .+|..|+|.+.+.
T Consensus 10 ~~~~C~~C~G~G~~~-----~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~ 63 (79)
T 1exk_A 10 TLEECDVCHGSGAKP-----GTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLI 63 (79)
T ss_dssp CEEECGGGTTTSBCS-----SSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEEC
T ss_pred cceECCCCcccccCC-----CccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEEC
Confidence 345677777777532 122356777777776653 4677777766553
No 55
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.79 E-value=0.00039 Score=49.92 Aligned_cols=24 Identities=33% Similarity=0.804 Sum_probs=9.9
Q ss_pred ecccCCceeEEEeeeccccCCCeE
Q 013163 268 TCRQCGGTGHIITNWCKSCKGARV 291 (448)
Q Consensus 268 ~C~~C~G~G~~~~~~C~~C~G~g~ 291 (448)
+|+.|+|+|.++..+|+.|+|.|.
T Consensus 11 ~C~~C~GsG~~~~~~C~~C~G~G~ 34 (53)
T 2bx9_A 11 ACPKCERAGEIEGTPCPACSGKGV 34 (53)
T ss_dssp ECTTTTTSSEETTEECTTTTTSSE
T ss_pred cCCCCcceeccCCCCCccCCCCcc
Confidence 344444444433344444444443
No 56
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=96.76 E-value=0.00048 Score=49.46 Aligned_cols=27 Identities=33% Similarity=0.815 Sum_probs=13.2
Q ss_pred ccCCCCCCCCCCCCCccccCcCCCCCCceE
Q 013163 228 LPCEACGGEGVPPGVKPEKCRRCKGSGMES 257 (448)
Q Consensus 228 ~~C~~C~GsG~~~~~~~~~C~~C~G~G~~~ 257 (448)
.+|+.|+|+|.... .+|+.|+|+|.+.
T Consensus 10 ~~C~~C~GsG~~i~---~~C~~C~G~G~v~ 36 (53)
T 3lcz_A 10 TTCPNCNGSGREEP---EPCPKCLGKGVIL 36 (53)
T ss_dssp EECTTTTTSCEETT---EECTTTTTSSEEE
T ss_pred ccCcCCcccccCCC---CcCCCCCCcEEEE
Confidence 45555555554322 3455555555443
No 57
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.75 E-value=0.00051 Score=49.34 Aligned_cols=28 Identities=29% Similarity=0.726 Sum_probs=16.4
Q ss_pred ccCCCCCCCCCCCCCccccCcCCCCCCceEE
Q 013163 228 LPCEACGGEGVPPGVKPEKCRRCKGSGMESI 258 (448)
Q Consensus 228 ~~C~~C~GsG~~~~~~~~~C~~C~G~G~~~~ 258 (448)
..|+.|+|+|.... .+|+.|+|+|.+..
T Consensus 10 ~~C~~C~GsG~~~~---~~C~~C~G~G~v~~ 37 (53)
T 2bx9_A 10 VACPKCERAGEIEG---TPCPACSGKGVILT 37 (53)
T ss_dssp EECTTTTTSSEETT---EECTTTTTSSEEEC
T ss_pred ccCCCCcceeccCC---CCCccCCCCccEEE
Confidence 46777777765432 45666666665543
No 58
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=87.05 E-value=0.28 Score=52.77 Aligned_cols=46 Identities=15% Similarity=0.211 Sum_probs=37.0
Q ss_pred ccCchhhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhh
Q 013163 88 ARDYYDVLGVNKNATA--SEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSKAYEV 141 (448)
Q Consensus 88 ~~d~y~iLgv~~~a~~--~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~ 141 (448)
..|||.+||++.++.. .+|++|||+||+..+++ ++++..|..|+.|
T Consensus 628 ~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 628 KASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp CCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred CCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 4569999999776655 77999999999976444 4688899999876
No 59
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=71.09 E-value=9.3 Score=38.40 Aligned_cols=27 Identities=15% Similarity=0.335 Sum_probs=21.7
Q ss_pred CCeeeeecCCCcEEEEeCCCCCCCcEEEEcC
Q 013163 363 GGTIQVPTLTGDVVLKVRPGTQPGQKVVLKN 393 (448)
Q Consensus 363 G~~~~v~tldG~~~l~i~~g~~~g~~~~l~g 393 (448)
-+++.||-|+ +.|+||++.|..-.|.|
T Consensus 294 ta~i~IPEL~----lei~pg~~~G~~TTVEG 320 (404)
T 2qkd_A 294 TCSVEIPELE----FELGMAVLGGKFTTLEG 320 (404)
T ss_dssp TCEEEEGGGT----EEECTTTTCSEEEEHHH
T ss_pred ceEEEeeeee----EEecCCCCCceEEeHHH
Confidence 4678888886 78999998888777755
No 60
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=68.49 E-value=8.7 Score=38.59 Aligned_cols=27 Identities=19% Similarity=0.380 Sum_probs=21.0
Q ss_pred CCeeeeecCCCcEEEEeCCCCCCCcEEEEcC
Q 013163 363 GGTIQVPTLTGDVVLKVRPGTQPGQKVVLKN 393 (448)
Q Consensus 363 G~~~~v~tldG~~~l~i~~g~~~g~~~~l~g 393 (448)
..++.||-|+ +.||||++-|..-.|.|
T Consensus 86 tati~IPEL~----~eI~pg~~~G~iTTVEG 112 (404)
T 2qkd_A 86 SATTRIPELD----FEIPAFSQKGALTTVEG 112 (404)
T ss_dssp TCEEEEGGGT----EEECTTSSCCEEEEHHH
T ss_pred CcEEEeeeee----EEecCccCCceEEeHHH
Confidence 4678888886 78999998888776644
No 61
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=58.35 E-value=17 Score=34.40 Aligned_cols=17 Identities=24% Similarity=0.476 Sum_probs=0.0
Q ss_pred CCCHHHHHHHHHHHHHh
Q 013163 418 NLTQRQRELIEEFAKEE 434 (448)
Q Consensus 418 ~ls~~q~~ll~~~~~~~ 434 (448)
.+|+++.+.|+++.+..
T Consensus 255 ~~t~ed~~~i~~ls~~~ 271 (279)
T 1ltl_A 255 QISEEDEEKIKELAGDP 271 (279)
T ss_dssp -----------------
T ss_pred CCCHHHHHHHHHHhcCC
Confidence 47888888888887654
No 62
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=43.14 E-value=15 Score=28.63 Aligned_cols=23 Identities=22% Similarity=0.465 Sum_probs=20.4
Q ss_pred EEECCCCCCHHHHHHHHHHHHHh
Q 013163 412 NVSIPTNLTQRQRELIEEFAKEE 434 (448)
Q Consensus 412 ~V~~P~~ls~~q~~ll~~~~~~~ 434 (448)
.+.||.+||+.||.+|-++++.-
T Consensus 35 ~l~FP~sLs~~eR~~IH~lA~~~ 57 (86)
T 1msz_A 35 QLEFPPSLNSHDRLRVHQIAEEH 57 (86)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHT
T ss_pred EEEcCCCCCHHHHHHHHHHHHHc
Confidence 67999999999999999998653
No 63
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=41.45 E-value=25 Score=26.97 Aligned_cols=52 Identities=17% Similarity=0.542 Sum_probs=26.6
Q ss_pred ccCCCCCCCCCCCCCccccCcCCCCCCceEEeecceeeeEecccCCceeEEE------eeeccccCCC
Q 013163 228 LPCEACGGEGVPPGVKPEKCRRCKGSGMESIHSGFMSINQTCRQCGGTGHII------TNWCKSCKGA 289 (448)
Q Consensus 228 ~~C~~C~GsG~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~------~~~C~~C~G~ 289 (448)
..||.|+..=... .....|..|+.. +.....|+.|+-.=.+. .-.|..|++-
T Consensus 3 ~~CP~C~~~l~~~-~~~~~C~~C~~~---------~~~~afCPeCgq~Le~lkACGA~~yFC~~C~~L 60 (81)
T 2jrp_A 3 ITCPVCHHALERN-GDTAHCETCAKD---------FSLQALCPDCRQPLQVLKACGAVDYFCQNGHGL 60 (81)
T ss_dssp CCCSSSCSCCEEC-SSEEECTTTCCE---------EEEEEECSSSCSCCCEEEETTEEEECCTTTTCC
T ss_pred CCCCCCCCccccC-CCceECcccccc---------CCCcccCcchhhHHHHHHhcCCcCeeeccCCCE
Confidence 4577776442211 123357777542 23344666665543322 3567777764
No 64
>2vl6_A SSO MCM N-TER, minichromosome maintenance protein MCM; helicase, hydrolase, zinc-finger, ATP-binding, DNA-BIND ssDNA binding; 2.8A {Sulfolobus solfataricus}
Probab=38.80 E-value=99 Score=28.69 Aligned_cols=63 Identities=16% Similarity=0.262 Sum_probs=29.3
Q ss_pred eeEecccCCceeEEEeeeccccCCCeEEecceEEEEE-----ecCCCCCCceeEEeccCCCCCCCCCCccEEEEE
Q 013163 265 INQTCRQCGGTGHIITNWCKSCKGARVVKGSKSVKLD-----IMPGVDNNETLKVFRSGGADPDGNQPGDLYVTI 334 (448)
Q Consensus 265 ~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~k~l~V~-----Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i 334 (448)
....|+.|+..|...-.. +...-..-..++|. +|+|--+-+ +.+.=.++ ..+...|||-+.+.
T Consensus 167 ~P~~Cp~C~~~~~~~l~~-----~~s~f~D~Q~ikiQE~pe~vp~G~~Prs-i~v~l~~d-Lvd~~~PGDrV~vt 234 (268)
T 2vl6_A 167 MPTICPKCGKPGQFRLIP-----EKTKLIDWQKAVIQERPEEVPSGQLPRQ-LEIILEDD-LVDSARPGDRVKVT 234 (268)
T ss_dssp CCSBCTTTCCBCEEEECG-----GGCEEEEEEEEEEECCGGGSCTTSCCCE-EEEEEEGG-GTTSSCTTCEEEEE
T ss_pred CCccCCCCCCCCCEEEec-----CccEEEeeEEEEEEeCCCCCCCCCCCcE-EEEEEccC-ccCcccCCCEEEEE
Confidence 335577777665332211 01122234566665 555544433 22222222 23346789987744
No 65
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=33.73 E-value=15 Score=26.53 Aligned_cols=13 Identities=31% Similarity=0.912 Sum_probs=6.6
Q ss_pred eeeeEecccCCce
Q 013163 263 MSINQTCRQCGGT 275 (448)
Q Consensus 263 ~~~~~~C~~C~G~ 275 (448)
+++...|+.|++.
T Consensus 14 YTLk~~CP~CG~~ 26 (60)
T 2aus_D 14 YTLKETCPVCGEK 26 (60)
T ss_dssp EESSSBCTTTCSB
T ss_pred EEccccCcCCCCc
Confidence 3445556666543
No 66
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=31.65 E-value=19 Score=26.08 Aligned_cols=11 Identities=27% Similarity=1.078 Sum_probs=5.4
Q ss_pred eeeEecccCCc
Q 013163 264 SINQTCRQCGG 274 (448)
Q Consensus 264 ~~~~~C~~C~G 274 (448)
++...|+.|++
T Consensus 16 TLk~~CP~CG~ 26 (60)
T 2apo_B 16 TLKEICPKCGE 26 (60)
T ss_dssp ESSSBCSSSCS
T ss_pred eccccCcCCCC
Confidence 33445555553
No 67
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=31.14 E-value=30 Score=26.17 Aligned_cols=54 Identities=17% Similarity=0.353 Sum_probs=39.8
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCC--hHHHHHHHHHHHHHhhhcc-cccccccccccc
Q 013163 102 TASEIKKAYYGLAKKLHPDTNKDD--PEAEKKFQEVSKAYEVLKD-DEKRSVYDQVGH 156 (448)
Q Consensus 102 ~~~eIk~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~~L~d-~~~R~~yd~~g~ 156 (448)
-..-++.+|+.+.+...|...... .++..+|..-. +|..+.+ .+++.+|+.|-.
T Consensus 7 r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi~ 63 (77)
T 2cqn_A 7 GMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFMH 63 (77)
T ss_dssp SHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHHH
Confidence 456788999999988888876654 35666666555 7999976 567788888764
No 68
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=30.82 E-value=28 Score=27.68 Aligned_cols=51 Identities=20% Similarity=0.554 Sum_probs=30.1
Q ss_pred ccCCCCCCCCCCCCCccccCcCCCCCCceEEeecceeeeEecccCCceeEEEe------eeccccCC
Q 013163 228 LPCEACGGEGVPPGVKPEKCRRCKGSGMESIHSGFMSINQTCRQCGGTGHIIT------NWCKSCKG 288 (448)
Q Consensus 228 ~~C~~C~GsG~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------~~C~~C~G 288 (448)
..||.|+-.=...+ ....|..|+.. +..+..||.|+-.=++.+ -.|..|+|
T Consensus 33 ~~CP~Cq~eL~~~g-~~~hC~~C~~~---------f~~~a~CPdC~q~LevLkACGAvdYFC~~chg 89 (101)
T 2jne_A 33 LHCPQCQHVLDQDN-GHARCRSCGEF---------IEMKALCPDCHQPLQVLKACGAVDYFCQHGHG 89 (101)
T ss_dssp CBCSSSCSBEEEET-TEEEETTTCCE---------EEEEEECTTTCSBCEEEEETTEEEEEETTTTE
T ss_pred ccCccCCCcceecC-CEEECccccch---------hhccccCcchhhHHHHHHHhcCcchhhccCCc
Confidence 56777764311111 12347777652 455678888887766654 46777766
No 69
>3nyb_B Protein AIR2; polya RNA polymerase, zinc knuckle protein, RNA surveillance binds to TRF4P/AIR2P heterodimer; 2.70A {Saccharomyces cerevisiae}
Probab=30.54 E-value=18 Score=27.90 Aligned_cols=53 Identities=15% Similarity=0.209 Sum_probs=24.2
Q ss_pred eeccCCCCCCCCCCCCC--ccccCcCCCCCCceEEe-ecceeeeEecccCCceeEEE
Q 013163 226 TELPCEACGGEGVPPGV--KPEKCRRCKGSGMESIH-SGFMSINQTCRQCGGTGHII 279 (448)
Q Consensus 226 ~~~~C~~C~GsG~~~~~--~~~~C~~C~G~G~~~~~-~g~~~~~~~C~~C~G~G~~~ 279 (448)
+.+.|..|+..|-.... ....|-.|...|.+... ..+ .....|..|+..|++-
T Consensus 4 k~~~C~~Cg~~GH~~~~Cp~~~rcY~c~~~gh~~~~c~~p-~~~~~CYnCG~~GH~~ 59 (83)
T 3nyb_B 4 KKVQCTLCKSKKHSKERCPSIWRAYILVDDNEKAKPKVLP-FHTIYCYNCGGKGHFG 59 (83)
T ss_dssp ---CCSSSCCSSSCGGGCGGGTCCCCBC--------------CCCBCSSSSCBSSCG
T ss_pred ccCCCCCCCCCCCccccCCCcccccccccCCcccccccCC-CCCCeecccCCCCcCc
Confidence 35678999877743211 12246677777654210 111 1246788888888654
No 70
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=30.46 E-value=23 Score=39.04 Aligned_cols=30 Identities=33% Similarity=0.805 Sum_probs=16.9
Q ss_pred CcCCCCCCceEEeecce-eeeEecccCCcee
Q 013163 247 CRRCKGSGMESIHSGFM-SINQTCRQCGGTG 276 (448)
Q Consensus 247 C~~C~G~G~~~~~~g~~-~~~~~C~~C~G~G 276 (448)
|+.|.|.|.+...+.++ ....+|+.|+|+.
T Consensus 641 c~~c~g~G~~~~~~~f~~~v~~~c~~c~G~r 671 (842)
T 2vf7_A 641 CEHCQGEGWVMVELLFLPSVYAPCPVCHGTR 671 (842)
T ss_dssp CTTTTTCSEEEETTCSSSCEEEECTTTTTCC
T ss_pred cccccCCCccchhhhcCCccceecccccCcc
Confidence 77777777665444333 2344566555554
No 71
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=29.92 E-value=65 Score=26.83 Aligned_cols=43 Identities=19% Similarity=0.237 Sum_probs=31.1
Q ss_pred EEEeCCCCCCCcEEEEcCCCccCCCC---------CCCCcEEEEEEEECCCC
Q 013163 376 VLKVRPGTQPGQKVVLKNKGIKTRNS---------FSFGDQYVHFNVSIPTN 418 (448)
Q Consensus 376 ~l~i~~g~~~g~~~~l~g~G~p~~~~---------~~~GDL~V~~~V~~P~~ 418 (448)
...||.|.++|+.++|.|.=.+..+. ....|+-+||++.|.++
T Consensus 9 ~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~~~ 60 (138)
T 3zxf_A 9 KSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTS 60 (138)
T ss_dssp EEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETTTT
T ss_pred EeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcCCC
Confidence 45789999999999998863322111 12469999999999763
No 72
>2r0h_A CGL3 lectin; galectin-related, sugar binding protein, chitotriose, chitooligosaccharides; HET: CTO; 1.90A {Coprinus cinereus} PDB: 2r0f_A*
Probab=28.91 E-value=1.3e+02 Score=26.16 Aligned_cols=44 Identities=11% Similarity=0.211 Sum_probs=32.5
Q ss_pred EEEEeCCCCCCCcEEEEcCCCccC----------CCC------CCCCcEEEEEEEECCCC
Q 013163 375 VVLKVRPGTQPGQKVVLKNKGIKT----------RNS------FSFGDQYVHFNVSIPTN 418 (448)
Q Consensus 375 ~~l~i~~g~~~g~~~~l~g~G~p~----------~~~------~~~GDL~V~~~V~~P~~ 418 (448)
..+.++.+.++|+.++|.|.-++. .+. ...+|+.+||+..|.++
T Consensus 9 ~~~~L~~~L~~G~~i~I~G~v~~~~~~~~~~~~~a~rF~INl~~g~~DIalHfNPRF~e~ 68 (164)
T 2r0h_A 9 STVDLSEPLKDNGIIVFQSDKLDLEPSPNLGPTGIDNTNVNLINAKGDVLLHIGIRRREN 68 (164)
T ss_dssp EEEECSSCCCTTCEEEEECSCCCCSCCSCCCTTSSCCEEEEEEETTSCEEEEEEEETTTT
T ss_pred eeEECCCCccCCCEEEEEEEecCcccccccCCCCCCeEEEEeeeCCCCEEEEEeeccCCC
Confidence 357889999999999999986531 010 02359999999999753
No 73
>2wkk_A Galectin-2; sugar-binding protein, secreted, cell WALL, sugar binding, sugar binding protein, beta-galactoside binding lectin, fruiting BODY; HET: GAL NAG FUC; 1.50A {Coprinopsis cinerea} PDB: 1ulc_A* 1ul9_A* 1ule_A* 1ulf_A* 1ulg_A* 1uld_A*
Probab=28.59 E-value=72 Score=27.12 Aligned_cols=43 Identities=7% Similarity=0.162 Sum_probs=30.3
Q ss_pred EEEEeCCCCCCCcEEEEcCCCccC-CCC------CCCCcEEEEEEEECCC
Q 013163 375 VVLKVRPGTQPGQKVVLKNKGIKT-RNS------FSFGDQYVHFNVSIPT 417 (448)
Q Consensus 375 ~~l~i~~g~~~g~~~~l~g~G~p~-~~~------~~~GDL~V~~~V~~P~ 417 (448)
..+.||.|.++|+.++|.|.=.+. .+. ...+|+.+||++.|.+
T Consensus 9 ~~~~ip~gl~~G~~i~I~G~~~~~~a~rF~INl~~g~~dialHfnpRf~~ 58 (150)
T 2wkk_A 9 NQVKLQNDFKPESVAAIRSSAFNSKGGTTVFNFLSAGENILLHISIRPGE 58 (150)
T ss_dssp EEEEEEEEECTTCEEEEECSCCCTTCCCEEEEEECTTCCEEEEEEEETTT
T ss_pred cceecCCCCcCCCEEEEEEEECCCCCCEEEEEEecCCCCEEEEEeeecCC
Confidence 356788889999999999842221 111 1234999999999985
No 74
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=26.54 E-value=33 Score=38.39 Aligned_cols=31 Identities=29% Similarity=0.839 Sum_probs=18.8
Q ss_pred cCcCCCCCCceEEeecce-eeeEecccCCcee
Q 013163 246 KCRRCKGSGMESIHSGFM-SINQTCRQCGGTG 276 (448)
Q Consensus 246 ~C~~C~G~G~~~~~~g~~-~~~~~C~~C~G~G 276 (448)
.|+.|+|.|.+...+.++ ....+|..|.|..
T Consensus 755 rC~~C~g~G~i~~em~fl~~v~~~ce~c~G~r 786 (972)
T 2r6f_A 755 RCEACHGDGIIKIEMHFLPDVYVPCEVCHGKR 786 (972)
T ss_dssp BCTTTTTCSEEEECCSSSCCEEEECTTTTTCC
T ss_pred cccccccccceeeehhcccccccccccccccc
Confidence 488888888765444433 3345666666653
No 75
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=26.53 E-value=49 Score=22.78 Aligned_cols=7 Identities=43% Similarity=1.331 Sum_probs=3.5
Q ss_pred EecccCC
Q 013163 267 QTCRQCG 273 (448)
Q Consensus 267 ~~C~~C~ 273 (448)
..|++|+
T Consensus 38 ~~C~kCG 44 (50)
T 3j20_Y 38 WACGKCG 44 (50)
T ss_dssp EECSSSC
T ss_pred EECCCCC
Confidence 3455553
No 76
>3nv1_A Galectin-9, galectin 9 short isoform variant; sugar binding, sugar binding protein; 1.50A {Homo sapiens} SCOP: b.29.1.0 PDB: 3nv2_A* 3nv3_A* 3nv4_A*
Probab=25.61 E-value=81 Score=26.26 Aligned_cols=43 Identities=16% Similarity=0.305 Sum_probs=30.4
Q ss_pred EEEeCCCCCCCcEEEEcCCCccCCCCC----CC-CcEEEEEEEECCCC
Q 013163 376 VLKVRPGTQPGQKVVLKNKGIKTRNSF----SF-GDQYVHFNVSIPTN 418 (448)
Q Consensus 376 ~l~i~~g~~~g~~~~l~g~G~p~~~~~----~~-GDL~V~~~V~~P~~ 418 (448)
.-.||.|.++|+.++|+|.=.+..+.- .. .|+-+||++.|.++
T Consensus 11 ~~~i~~gl~~G~~i~I~G~v~~~~~~F~Inl~~~~dialHfnpRf~~~ 58 (138)
T 3nv1_A 11 ITTILGGLYPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNPRFDEN 58 (138)
T ss_dssp EEECTTCCCTTCEEEEEEEECTTCCBEEEEEEETTEEEEEEEEETTTT
T ss_pred EeeCCCCCCCCCEEEEEEEECCCCCEEEEEcCcCCCEEEEEEEecCCC
Confidence 456899999999999988644322210 01 29999999999764
No 77
>1ww7_A Galectin; carbohydrate recognition domain,X-RAY crystallographic analysis, sulfate ION, sugar binding protein; 1.90A {Agrocybe cylindracea} PDB: 1ww4_A* 1ww6_A* 1ww5_A 2zgl_A 2zgm_A* 2zgn_A* 3afk_A* 3m3c_A* 3m3q_A* 2zgk_A 2zgs_A 2zgq_A 2zgr_A 3m3e_A* 2zgo_A* 3m3o_A* 2zgp_A 2zgu_A 2zgt_A
Probab=24.30 E-value=85 Score=27.13 Aligned_cols=43 Identities=12% Similarity=0.213 Sum_probs=30.2
Q ss_pred EEEeCCCCCCCcEEEEcCCCccCC----CC--------CCCCcEEEEEEEECCCC
Q 013163 376 VLKVRPGTQPGQKVVLKNKGIKTR----NS--------FSFGDQYVHFNVSIPTN 418 (448)
Q Consensus 376 ~l~i~~g~~~g~~~~l~g~G~p~~----~~--------~~~GDL~V~~~V~~P~~ 418 (448)
...++.+.++|+.+.|.|.=++.. +. .+.+|+.+||++.|.++
T Consensus 15 ~~~L~~gL~~G~~I~I~G~~~~~~~~~~~~~rF~INl~~g~~DIalHfnpRF~e~ 69 (160)
T 1ww7_A 15 SVDLAAPVTTGDIVTFFSSALNLSAGAGSPNNTALNLLSENGAYLLHIAFRLQEN 69 (160)
T ss_dssp EEEEEEEECTTCEEEEEESCCCCTTCTTSSCEEEEEEECTTCCEEEEEEEETTTT
T ss_pred eEeCCCCCcCCCEEEEEeEecccccCCCCCCeEEEEeccCCCCEEEEeeeecCCC
Confidence 456778899999999999744311 00 12358999999998753
No 78
>2ns6_A Mobilization protein A; nickase, 5-strand antiparallel beta sheet, metalloenzyme, hydrolase; 2.10A {Pseudomonas aeruginosa}
Probab=22.24 E-value=92 Score=27.50 Aligned_cols=31 Identities=29% Similarity=0.478 Sum_probs=25.9
Q ss_pred CCcEEEEEEEECCCCCCHHH-HHHHHHHHHHh
Q 013163 404 FGDQYVHFNVSIPTNLTQRQ-RELIEEFAKEE 434 (448)
Q Consensus 404 ~GDL~V~~~V~~P~~ls~~q-~~ll~~~~~~~ 434 (448)
.+-|.=+|.|.+|..||++| ++|+++|.+..
T Consensus 67 na~lare~~iALP~EL~~eq~~~L~~~f~~~~ 98 (185)
T 2ns6_A 67 NGRLFKEVEFALPVELTLDQQKALASEFAQHL 98 (185)
T ss_dssp TSCCEEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 47799999999999999855 56888888765
No 79
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A*
Probab=21.36 E-value=1.4e+02 Score=25.13 Aligned_cols=42 Identities=21% Similarity=0.318 Sum_probs=30.4
Q ss_pred EEEEeCCCCCCCcEEEEcCCCccCCC---------CCCCCcEEEEEEEECC
Q 013163 375 VVLKVRPGTQPGQKVVLKNKGIKTRN---------SFSFGDQYVHFNVSIP 416 (448)
Q Consensus 375 ~~l~i~~g~~~g~~~~l~g~G~p~~~---------~~~~GDL~V~~~V~~P 416 (448)
-...||.|.++|+.++|.|.=++... +...+|+.+||++.|.
T Consensus 17 ~~~~i~~gl~~G~~i~I~G~~~~~~~~rF~Inl~~g~~~~dialHfnpRf~ 67 (148)
T 2zhn_A 17 FSGTIQGGLQDGLQITVNGTVLSSSGTRFAVNFQTGFSGNDIAFHFNPRFE 67 (148)
T ss_dssp EEEECTTCCCTTCEEEEEEEECSSSCSBEEEEEESSSSSSCEEEEEEEECS
T ss_pred EEEECCCCCccCCEEEEEEEECCCCCCEEEEEEeeCCCCCCEEEEEEEEEC
Confidence 45678999999999999984321111 1113699999999998
No 80
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=21.11 E-value=6.9 Score=40.84 Aligned_cols=62 Identities=16% Similarity=0.433 Sum_probs=38.0
Q ss_pred cCCCCCCCCCCCCC----ccccCcCCCCCCceEEe-------ecceeeeEecccCCceeEEEeeeccccCCCe
Q 013163 229 PCEACGGEGVPPGV----KPEKCRRCKGSGMESIH-------SGFMSINQTCRQCGGTGHIITNWCKSCKGAR 290 (448)
Q Consensus 229 ~C~~C~GsG~~~~~----~~~~C~~C~G~G~~~~~-------~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g 290 (448)
.|..||+.+..... ....|-.|++.-..... .....-...|..|+..-......|..|+...
T Consensus 14 ~C~~CH~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~h~~~~~~~~C~~CH~~h~~~~~~c~~ch~~~ 86 (566)
T 1qo8_A 14 SCQSCHAKPIKVTDSETHENAQCKSCHGEYAELANDKLQFDPHNSHLGDINCTSCHKGHEEPKFYCNECHSFD 86 (566)
T ss_dssp CGGGTSCSSCCCCTTCHHHHHHHHHHHCCHHHHCCSSSSSCTTSSTTCSCCGGGTSCSSSCCCCGGGGTCCCC
T ss_pred ChhhhCCCccccccccCccCCHHhhhCcCHHHHhhccccCCcchhcCCCCCchhhCcCCcCcCchhhhhcCCC
Confidence 69999988653211 23479999976322111 0000124689999976655557899998754
No 81
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=21.07 E-value=1.2e+02 Score=28.40 Aligned_cols=81 Identities=19% Similarity=0.394 Sum_probs=37.5
Q ss_pred cCcCCCCCCceEEeecceeeeEecccCCceeEEEeeeccccCCCeEEecceEEEEE-----ecCCCCCCceeEEeccCCC
Q 013163 246 KCRRCKGSGMESIHSGFMSINQTCRQCGGTGHIITNWCKSCKGARVVKGSKSVKLD-----IMPGVDNNETLKVFRSGGA 320 (448)
Q Consensus 246 ~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~k~l~V~-----Ip~G~~~G~~i~~~g~G~~ 320 (448)
.|..|+....+....+.+.....|+.|++.|..... +...-..-..++|. +|+|--+-+ +.+.=.++
T Consensus 136 ~C~~C~~~~~v~~~~~~~~~P~~Cp~C~~~~f~l~~------~~s~f~D~Q~ikiQE~pe~vp~G~~Prs-i~V~l~~d- 207 (279)
T 1ltl_A 136 ECRGCMRHHAVTQSTNMITEPSLCSECGGRSFRLLQ------DESEFLDTQTLKLQEPLENLSGGEQPRQ-ITVVLEDD- 207 (279)
T ss_dssp EETTTCCEEEEECSSSSCCCCSCCTTTCCCCEEECG------GGCEEEEEEEEEEECCSTTCCSSCCCCE-EEEEEEGG-
T ss_pred EcCCCCCEEEEEecCCcccCCCcCCCCCCCCcEEec------cccEEEeeEEEEEecCcccCCCCCCCeE-EEEEEccc-
Confidence 577776443221112334445678888888833321 11112334566666 344433322 22222222
Q ss_pred CCCCCCCccEEEEE
Q 013163 321 DPDGNQPGDLYVTI 334 (448)
Q Consensus 321 ~~~g~~~GDL~v~i 334 (448)
..+...|||-+.+.
T Consensus 208 Lvd~~~PGDrV~vt 221 (279)
T 1ltl_A 208 LVDTLTPGDIVRVT 221 (279)
T ss_dssp GTTCCCTTCEEEEE
T ss_pred ccCccCCCCEEEEE
Confidence 22345677776544
No 82
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=20.95 E-value=1.1e+02 Score=24.10 Aligned_cols=24 Identities=13% Similarity=0.253 Sum_probs=20.3
Q ss_pred EEEEEEEECCCCCCHHHHHHHHHH
Q 013163 407 QYVHFNVSIPTNLTQRQRELIEEF 430 (448)
Q Consensus 407 L~V~~~V~~P~~ls~~q~~ll~~~ 430 (448)
..|++.|.+|..+++++.+-|+.-
T Consensus 3 FlV~m~V~~P~~~~~~~~~~~~a~ 26 (96)
T 1mli_A 3 FHVKMTVKLPVDMDPAKATQLKAD 26 (96)
T ss_pred EEEEEEeeCCCCCCHHHHHHHHHH
Confidence 358999999999999998877654
No 83
>2k0a_A PRE-mRNA-splicing factor RDS3; zinc finger, topological knot, mRNA processing, nucleus, spliceosome, RNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=20.40 E-value=20 Score=28.79 Aligned_cols=58 Identities=29% Similarity=0.531 Sum_probs=34.2
Q ss_pred eeeeeeeeccCCCCCCCCCC------CCCccccCcCCCCCCceEEeecceeeeEecccCC-ceeEEEeeeccccC
Q 013163 220 KTVTFQTELPCEACGGEGVP------PGVKPEKCRRCKGSGMESIHSGFMSINQTCRQCG-GTGHIITNWCKSCK 287 (448)
Q Consensus 220 k~i~~~~~~~C~~C~GsG~~------~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~-G~G~~~~~~C~~C~ 287 (448)
|.-.+.....|+.|.|.-.. +.+....|..|+ - .+.+..|--|+ +.|....-.|..|.
T Consensus 15 KqpG~~iG~lCekcdGkC~iCDs~Vrp~~~VrICdeCs-~---------G~~~~rCIiCg~~~g~~dAYYC~eC~ 79 (109)
T 2k0a_A 15 KQPGVQTGLLCEKCDGKCPICDSYVRPKRKVRVCENCS-F---------GKQAKNCIICNLNVGVNDAFYCWECC 79 (109)
T ss_dssp CCEEEEECEECGGGTTCCTTTCCCCCCCEECEEEHHHH-T---------SSTTSBCTTTSSSBCCEECEECHHHH
T ss_pred CCCcchhhhhhhhcCCcccccCCccCCcceEEECCcCC-C---------CCcCCceEEcCCCCCcccceehHhhh
Confidence 33344445677777776432 223334455553 1 13356788888 88877777777775
No 84
>2yro_A Galectin-8; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.32 E-value=96 Score=26.43 Aligned_cols=44 Identities=20% Similarity=0.241 Sum_probs=31.4
Q ss_pred EEEEeCCCCCCCcEEEEcCCCccCCCC-------CCCCcEEEEEEEECCCC
Q 013163 375 VVLKVRPGTQPGQKVVLKNKGIKTRNS-------FSFGDQYVHFNVSIPTN 418 (448)
Q Consensus 375 ~~l~i~~g~~~g~~~~l~g~G~p~~~~-------~~~GDL~V~~~V~~P~~ 418 (448)
-...||.+.++|+.++|.|.=.+..+. +..+|+.+||++.|.++
T Consensus 19 f~~~ip~gl~~G~~i~I~G~v~~~~~rF~Inl~~g~~~dialHfnpRf~~~ 69 (155)
T 2yro_A 19 FAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIK 69 (155)
T ss_dssp EEEECSSCCCTTCEEEEEEEECTTCCCEEEEEEETTTTEEEEEEECCSSSC
T ss_pred EeeecCCCCccCCEEEEEEEECCCCCEEEEEEecCCCCCEEEEEEEEcCCC
Confidence 356789999999999998853322111 11168999999999864
No 85
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=20.24 E-value=3.3e+02 Score=24.63 Aligned_cols=82 Identities=18% Similarity=0.288 Sum_probs=49.2
Q ss_pred EEEEEEEecccccccCcceEEEEEeCHHHHhcCCeee----eec-------CCCcEEEEeCCCCCCC--cEEEEcCCCcc
Q 013163 331 YVTIKVREDPVFRREGANIHVDSVLSVTQAILGGTIQ----VPT-------LTGDVVLKVRPGTQPG--QKVVLKNKGIK 397 (448)
Q Consensus 331 ~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~----v~t-------ldG~~~l~i~~g~~~g--~~~~l~g~G~p 397 (448)
.+.|.|..+..+. .+|++-.+.|++.+...+.... +.. .-|.+.+.+.-....+ .+.++.+++++
T Consensus 86 ~l~~~V~d~d~~~--~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~~~l~v~v~~a~~L~ 163 (284)
T 2r83_A 86 TLVMAVYDFDRFS--KHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLK 163 (284)
T ss_dssp EEEEEEEECCSSS--CCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETTTTEEEEEEEEEESCC
T ss_pred EEEEEEEECCCCC--CCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCcCCceEEEEEEeECCC
Confidence 5566666665543 3578889999988877665322 211 1244443322211223 24567899998
Q ss_pred CCCCCCCCcEEEEEEEE
Q 013163 398 TRNSFSFGDQYVHFNVS 414 (448)
Q Consensus 398 ~~~~~~~GDL~V~~~V~ 414 (448)
.......-|-||++.+.
T Consensus 164 ~~d~~~~~dpyv~v~~~ 180 (284)
T 2r83_A 164 KMDVGGLSDPYVKIHLM 180 (284)
T ss_dssp CCSTTSCCCEEEEEEEE
T ss_pred CcCCCCCcCeEEEEEEE
Confidence 75544567999999874
Done!