Query 013168
Match_columns 448
No_of_seqs 197 out of 1932
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 05:27:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013168.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013168hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkt_A Multi antimicrobial ext 100.0 5.6E-43 1.9E-47 349.3 34.3 392 29-423 5-448 (460)
2 3mkt_A Multi antimicrobial ext 99.9 3E-21 1E-25 192.0 21.0 209 29-238 231-446 (460)
3 4ev6_A Magnesium transport pro 29.1 85 0.0029 28.6 5.9 26 397-423 313-338 (339)
4 2knc_B Integrin beta-3; transm 27.3 1.4E+02 0.0048 20.6 5.3 24 396-419 10-33 (79)
5 2k1k_A Ephrin type-A receptor 19.1 1.1E+02 0.0038 17.7 2.9 17 214-230 14-30 (38)
6 4hkr_A Calcium release-activat 17.1 4.5E+02 0.015 21.9 13.2 81 67-148 56-144 (214)
7 4ev6_A Magnesium transport pro 16.9 2.4E+02 0.0084 25.4 6.4 21 220-240 318-338 (339)
8 2jwa_A Receptor tyrosine-prote 13.1 2E+02 0.0067 17.4 3.0 6 232-237 32-37 (44)
9 1b9u_A Protein (ATP synthase); 11.2 2.3E+02 0.0079 15.5 3.7 27 402-428 5-31 (34)
10 3kp9_A Vkorc1/thioredoxin doma 9.3 5.5E+02 0.019 22.6 6.1 86 340-425 70-155 (291)
No 1
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=100.00 E-value=5.6e-43 Score=349.29 Aligned_cols=392 Identities=21% Similarity=0.334 Sum_probs=357.5
Q ss_pred chHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhcccc
Q 013168 29 GVLSGEVKKQGYIAAPMVAVTLSQYLLQVVSMMMVGHLGQLALSSTAMAISLASVTGFSVLLGMASALETLCGQAYGAQQ 108 (448)
Q Consensus 29 ~~~~~~~k~il~~~~P~~~~~~~~~~~~~id~~~v~~~g~~~~aa~~~~~~i~~~~~~~~~~gl~~~~~~~~s~~~g~~~ 108 (448)
...++..|++++.++|.+++++...+.+.+|+.+++++|++++|+++++.++..+. ..+..|++.+..+.++|.+|++|
T Consensus 5 ~~~~~~~k~~~~~~~p~~~~~~~~~~~~~v~~~~~~~lg~~~~~~~~~~~~i~~~~-~~~~~g~~~~~~~~is~~~g~~~ 83 (460)
T 3mkt_A 5 HRYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPS-ILFGVGLLMALVPVVAQLNGAGR 83 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTTSSHHHHHHHHHHHH-HHHHHHHHHHHGGGCTTTTSSSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCC
Confidence 34578999999999999999999999999999999999999999999999998875 88899999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCChhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhHHH
Q 013168 109 YQRIGTQTYTAIFCLFLVCFPLSFLWIYAGKLLVLIGQDPQISHEVGKFMIWLLPALFAYATMQPLIRYFQSQSLIIPMF 188 (448)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 188 (448)
+|+.++.+++++.+.+++++++.+++.+.++++.+++.+++..+.+..|+++++++.++..+.....+++|+.++++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 163 (460)
T 3mkt_A 84 QHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAM 163 (460)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCSSTTHHHHHHHHHHTTGGGHHHHHHHHHHHTTTTCTTSCCTTTH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 99999999999999999999877777788999998999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhHhhcc----cCCCcchhHHHHHHHHHHHHHHHHHHHhcccccccc--cCCCChHhHhcHHHHHHH
Q 013168 189 LSSCAALCLHIPICWSLVYK----SGLGNLGGALAIGISNWLNVTFLAIYMKFSTACAES--RVPISMELFQGIGEFFHF 262 (448)
Q Consensus 189 ~~~~~~~~~~i~~~~~li~~----~~~G~~Gaa~a~~i~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 262 (448)
+.++++.++|+++++++++. |++|+.|+++|+.+++++..++..++++++++.++. +.++.+.+++.+|++++.
T Consensus 164 ~~~~~~~~~~i~l~~~li~~~~~~p~~g~~g~a~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 243 (460)
T 3mkt_A 164 VIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRL 243 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCSCCCCSSTTSSTTTSHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHhCcchhhhhhhhcccccCHHHHHHHHHH
Confidence 99999999999999999975 479999999999999999999988888765543221 233334556788899999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------
Q 013168 263 AIPSAVMICLEWWSFELLILMSGLLPNPQLETSVLSVCLNTIQTLYAIPYGLGAA------------------------- 317 (448)
Q Consensus 263 ~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~aa~~i~~~i~~~~~~~~~~~~~a------------------------- 317 (448)
+.|..++.......+.+++.+++++|+ .++++|+++.++.++..+++.+++++
T Consensus 244 ~~p~~~~~~~~~~~~~~~~~~~~~~g~--~~va~~~i~~~i~~~~~~~~~~~~~a~~p~i~~~~g~~~~~~~~~~~~~~~ 321 (460)
T 3mkt_A 244 GFPVAAALFFEVTLFAVVALLVAPLGS--TVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVGL 321 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCTTSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCTTTTHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHcCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 999999999999999999999999986 46799999999999999999999888
Q ss_pred ----------------HhhHhhhccCCchHHHHHHHHHHHHHHHHHHHhhHHhhHhHHhhccCcchhhHHHHHHHHHHHh
Q 013168 318 ----------------VRRVFGYVFSNEKQVVDYVTTMAPLVCLSVIMDSLQGVFSGVARGCGWQNIAAFVNLGAFYLCG 381 (448)
Q Consensus 318 ----------------~~~~i~~lf~~d~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 381 (448)
+++++..+|++|+++.+.+..++++++++.++++++.+..+++++.||++.+++.++++.|++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 401 (460)
T 3mkt_A 322 MTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLG 401 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh----cC-CCchhHhHHHHHHHHHHHHHHHHHHHcCCH
Q 013168 382 IPTAAILGFW----LK-FRGRGLWIGIQAGAFTQTLLLGIITTCTNW 423 (448)
Q Consensus 382 i~~~~~l~~~----~~-~g~~gi~~a~~~~~~~~~~~~~~~~~~~~w 423 (448)
+|+.+++.+. ++ +|..|+|++..+++.+.+++..++++|..+
T Consensus 402 i~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~~~~~ 448 (460)
T 3mkt_A 402 LPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWLQK 448 (460)
T ss_dssp HHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSSSSCC
T ss_pred HHHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987 66 899999999999999999888777766543
No 2
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.87 E-value=3e-21 Score=192.01 Aligned_cols=209 Identities=13% Similarity=0.164 Sum_probs=194.3
Q ss_pred chHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhcccc
Q 013168 29 GVLSGEVKKQGYIAAPMVAVTLSQYLLQVVSMMMVGHLGQLALSSTAMAISLASVTGFSVLLGMASALETLCGQAYGAQQ 108 (448)
Q Consensus 29 ~~~~~~~k~il~~~~P~~~~~~~~~~~~~id~~~v~~~g~~~~aa~~~~~~i~~~~~~~~~~gl~~~~~~~~s~~~g~~~ 108 (448)
+..++.+|++++.+.|.+++++...+...+|+.+++++|++++|+|+++.++.++. ..+..+++++..|.+++.+|++|
T Consensus 231 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~va~~~i~~~i~~~~-~~~~~~~~~a~~p~i~~~~g~~~ 309 (460)
T 3mkt_A 231 KPQPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLV-FMFPMSIGAAVSIRVGHKLGEQD 309 (460)
T ss_dssp SSTTSSTTTSHHHHHHHHHHHHHHHHHHHHHHHHTCTTSSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHSSC
T ss_pred ccCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCC
Confidence 34467789999999999999999999999999999999999999999999999997 89999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHhCCChhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhHH
Q 013168 109 YQRIGTQTYTAIFCLFLVCFPLSFL-WIYAGKLLVLIGQDPQISHEVGKFMIWLLPALFAYATMQPLIRYFQSQSLIIPM 187 (448)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~ 187 (448)
+|++++..+++..+...++++++++ ..+++++..++..|++..+.+..++++++++.++..++....+++++.|+++.+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 389 (460)
T 3mkt_A 310 TKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAI 389 (460)
T ss_dssp CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Confidence 9999999999999999999999875 888999999998888888999999999999999999999999999999999999
Q ss_pred HHHHHHHH-HhhhhhhhHhhcc----cC-CCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 013168 188 FLSSCAAL-CLHIPICWSLVYK----SG-LGNLGGALAIGISNWLNVTFLAIYMKFS 238 (448)
Q Consensus 188 ~~~~~~~~-~~~i~~~~~li~~----~~-~G~~Gaa~a~~i~~~~~~i~~~~~~~~~ 238 (448)
++.++++. ++|+++++++... ++ +|+.|+|+|+.+++.+..++..++++++
T Consensus 390 ~~~~~~~~~~~~i~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~~~ 446 (460)
T 3mkt_A 390 FHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWL 446 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999987 9999999999976 66 9999999999999999988876665543
No 3
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=29.07 E-value=85 Score=28.61 Aligned_cols=26 Identities=15% Similarity=0.525 Sum_probs=17.1
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHcCCH
Q 013168 397 RGLWIGIQAGAFTQTLLLGIITTCTNW 423 (448)
Q Consensus 397 ~gi~~a~~~~~~~~~~~~~~~~~~~~w 423 (448)
+|.|++..+ .++.+++.+++++|.+|
T Consensus 313 ~gy~~~l~~-m~~~~~~~~~~fkrk~W 338 (339)
T 4ev6_A 313 QGFWLVMAL-MVVIIMIFVYIFRRSGW 338 (339)
T ss_dssp THHHHHHHH-HHHHHHHHHHHHHTTTC
T ss_pred hHHHHHHHH-HHHHHHHHHHHHHHcCC
Confidence 455555444 45556667788888888
No 4
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=27.34 E-value=1.4e+02 Score=20.60 Aligned_cols=24 Identities=8% Similarity=-0.068 Sum_probs=12.0
Q ss_pred chhHhHHHHHHHHHHHHHHHHHHH
Q 013168 396 GRGLWIGIQAGAFTQTLLLGIITT 419 (448)
Q Consensus 396 ~~gi~~a~~~~~~~~~~~~~~~~~ 419 (448)
+.++..+...+.++.+++.+..++
T Consensus 10 ~~~Iv~gvi~gilliGllllliwk 33 (79)
T 2knc_B 10 ILVVLLSVMGAILLIGLAALLIWK 33 (79)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555555555444443
No 5
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=19.12 E-value=1.1e+02 Score=17.73 Aligned_cols=17 Identities=6% Similarity=0.024 Sum_probs=7.1
Q ss_pred chhHHHHHHHHHHHHHH
Q 013168 214 LGGALAIGISNWLNVTF 230 (448)
Q Consensus 214 ~Gaa~a~~i~~~~~~i~ 230 (448)
.|+.++.+++-.+...+
T Consensus 14 AGiVvG~v~gv~li~~l 30 (38)
T 2k1k_A 14 VAVIFGLLLGAALLLGI 30 (38)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred eeeehHHHHHHHHHHHH
Confidence 34444444444433333
No 6
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=17.11 E-value=4.5e+02 Score=21.85 Aligned_cols=81 Identities=14% Similarity=-0.027 Sum_probs=48.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhc--------ccccchHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 013168 67 GQLALSSTAMAISLASVTGFSVLLGMASALETLCGQAYG--------AQQYQRIGTQTYTAIFCLFLVCFPLSFLWIYAG 138 (448)
Q Consensus 67 g~~~~aa~~~~~~i~~~~~~~~~~gl~~~~~~~~s~~~g--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (448)
.+.-+.+|++...+.-.. ..+..-+++...|-+-..-+ ..-.+|.+.++-.+..++..+++++.+.-+..-
T Consensus 56 p~~LLi~fav~Ttllv~v-ml~AlMIsTcILPnIeav~~~h~~~~v~esPH~r~~~yIE~AW~fST~lGi~LFL~evall 134 (214)
T 4hkr_A 56 PPGMLIAFAICTTLLVAV-HMLALMISTCILPNIETVSNLHSISLVHESPHERLHWYIETAWAFSTLLGLILFLLEIAIL 134 (214)
T ss_dssp ---CHHHHHHHHHHHHHH-HHHHHHHHHHTTTC----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHhhcccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344588899888888664 77777777777766654422 234578888888888888888888776522222
Q ss_pred HHHHHhCCCh
Q 013168 139 KLLVLIGQDP 148 (448)
Q Consensus 139 ~l~~~~~~~~ 148 (448)
-.+++...+.
T Consensus 135 ~WVKF~~~~~ 144 (214)
T 4hkr_A 135 CWVKFYDLSR 144 (214)
T ss_dssp HHHHHTTTCH
T ss_pred heEEeecCCc
Confidence 3445554443
No 7
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=16.90 E-value=2.4e+02 Score=25.44 Aligned_cols=21 Identities=5% Similarity=-0.097 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHhcccc
Q 013168 220 IGISNWLNVTFLAIYMKFSTA 240 (448)
Q Consensus 220 ~~i~~~~~~i~~~~~~~~~~~ 240 (448)
.+...++.++..+++++|++|
T Consensus 318 ~l~~m~~~~~~~~~~fkrk~W 338 (339)
T 4ev6_A 318 VMALMVVIIMIFVYIFRRSGW 338 (339)
T ss_dssp HHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHcCC
Confidence 333344555555667766654
No 8
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=13.09 E-value=2e+02 Score=17.38 Aligned_cols=6 Identities=33% Similarity=0.390 Sum_probs=2.4
Q ss_pred HHHHhc
Q 013168 232 AIYMKF 237 (448)
Q Consensus 232 ~~~~~~ 237 (448)
..|++|
T Consensus 32 ~~~~RR 37 (44)
T 2jwa_A 32 GILIKR 37 (44)
T ss_dssp HHHHHH
T ss_pred Hhheeh
Confidence 334443
No 9
>1b9u_A Protein (ATP synthase); membrane protein, hydrolase; HET: GMA; NMR {Synthetic} SCOP: j.35.1.1
Probab=11.25 E-value=2.3e+02 Score=15.51 Aligned_cols=27 Identities=11% Similarity=0.127 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHH
Q 013168 402 GIQAGAFTQTLLLGIITTCTNWEKQAS 428 (448)
Q Consensus 402 a~~~~~~~~~~~~~~~~~~~~w~~~~~ 428 (448)
+..+...++.++..+.++|.-|++..+
T Consensus 5 ~~l~~~~i~Flil~~~l~kf~~~Pi~~ 31 (34)
T 1b9u_A 5 ATILGQAIAFVLFVLFCMKYVWPPLMA 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
No 10
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=9.31 E-value=5.5e+02 Score=22.61 Aligned_cols=86 Identities=7% Similarity=-0.072 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhHHhhHhHHhhccCcchhhHHHHHHHHHHHhHHHHHHHHHhcCCCchhHhHHHHHHHHHHHHHHHHHHH
Q 013168 340 APLVCLSVIMDSLQGVFSGVARGCGWQNIAAFVNLGAFYLCGIPTAAILGFWLKFRGRGLWIGIQAGAFTQTLLLGIITT 419 (448)
Q Consensus 340 l~i~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~g~~gi~~a~~~~~~~~~~~~~~~~~ 419 (448)
++...++..+.+....+.....+..+.....+..+......+...+.++.+..-+-+..+-.=...++.+...+++..+.
T Consensus 70 iP~~~~G~~~y~~v~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~fs~yL~y~~~~vi~a~C~~C~~~~~i~~~l~~~~~~ 149 (291)
T 3kp9_A 70 IPTAAVGLLGFLGVLALAVLPDGLPLVKRWRWPALFGLVSAMTAFEMYMLYLMVAVLRQFCMYCTTAIILVAGLGLVTVL 149 (291)
T ss_dssp EEHHHHHHHHHHHHHHHHHCC--CTTCSTTHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHS
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHh
Q ss_pred cCCHHH
Q 013168 420 CTNWEK 425 (448)
Q Consensus 420 ~~~w~~ 425 (448)
.+.|+.
T Consensus 150 g~~~~~ 155 (291)
T 3kp9_A 150 GHRWLD 155 (291)
T ss_dssp SCHHHH
T ss_pred CCChhh
Done!