Query 013170
Match_columns 448
No_of_seqs 221 out of 1391
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 05:30:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013170.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013170hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 2.2E-61 7.6E-66 484.1 26.2 295 6-438 4-309 (312)
2 1gp6_A Leucoanthocyanidin diox 100.0 2.5E-60 8.7E-65 484.8 25.2 296 7-442 45-349 (356)
3 1odm_A Isopenicillin N synthas 100.0 2E-59 6.8E-64 473.7 26.5 302 1-441 1-327 (331)
4 1w9y_A 1-aminocyclopropane-1-c 100.0 4.3E-60 1.5E-64 476.6 19.7 291 8-442 3-297 (319)
5 1dcs_A Deacetoxycephalosporin 100.0 1.3E-56 4.3E-61 449.8 15.6 286 7-440 3-307 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 1.4E-54 4.8E-59 429.1 24.1 249 7-374 2-262 (280)
7 3dkq_A PKHD-type hydroxylase S 72.5 8.1 0.00028 36.7 7.3 48 301-365 147-194 (243)
8 2hbt_A EGL nine homolog 1; pro 63.3 5.4 0.00018 37.8 3.9 77 260-364 130-211 (247)
9 2rg4_A Uncharacterized protein 62.9 23 0.00078 32.7 8.1 44 311-368 166-209 (216)
10 2iuw_A Alkylated repair protei 45.1 40 0.0014 31.5 6.6 45 311-364 184-228 (238)
11 2a1x_A Phytanoyl-COA dioxygena 29.1 95 0.0032 29.4 6.6 35 42-79 26-60 (308)
12 2jig_A Prolyl-4 hydroxylase; h 27.3 49 0.0017 30.2 4.0 46 313-365 170-216 (224)
13 3i3q_A Alpha-ketoglutarate-dep 24.4 96 0.0033 28.5 5.4 45 310-363 152-200 (211)
14 2dbn_A Hypothetical protein YB 23.5 31 0.0011 35.8 2.0 53 7-80 99-152 (461)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=2.2e-61 Score=484.14 Aligned_cols=295 Identities=15% Similarity=0.125 Sum_probs=231.8
Q ss_pred cCcceeEeCccccccccCCCCCCchhhHHHHHHHHHHHHHhhCCCCcEEEEEecCCCcHHHHHHHHHHHHHHhcCCHHHH
Q 013170 6 ILELYELPYSDLKLLCLDNTCSSSTEEIKRFETVRTSVMENLGPGGPGLLSITSVPNASIHRRNLLPLARKLALLNPDDR 85 (448)
Q Consensus 6 ~~~~~~id~sdl~~~~~~~~~~~~~~~~~~~~~~~~~I~~A~~~~G~G~l~~~gvp~~~el~~~l~~~a~~FF~LP~eeK 85 (448)
..+||+|||++|. + .+.+++++|.+||++||||+|++|||| .+++++++..+++||+||.|+|
T Consensus 4 ~~~iPvIDls~~~----~-----------~~~~~~~~l~~A~~~~GFf~v~nHGi~--~~~~~~~~~~~~~fF~lP~e~K 66 (312)
T 3oox_A 4 TSAIDPVSFSLYA----K-----------DFTRFAQELGASFERYGFAVLSDYDLD--QARIDAAVDSAKAFFALPVETK 66 (312)
T ss_dssp CCSSCCEETHHHH----H-----------CHHHHHHHHHHHHHHHSEEEEESCCSC--HHHHHHHHHHHHHHHTSCHHHH
T ss_pred CCCCCeEEChHhc----c-----------cHHHHHHHHHHHHHhCcEEEEECCCCC--HHHHHHHHHHHHHHHCCCHHHH
Confidence 4579999999997 1 356799999999999999999999999 9999999999999999999999
Q ss_pred Hhhccc--CCCCccccCC------CCCCcccccccccccccccccccccccCCCCCCCcCCcCCCCCCCCcccHHHHHHH
Q 013170 86 KRLLKE--HHLGSDVSLK------NPERNVSSFAMQLRYKQGLESTQCKFSSRADDNVKDQDLGQLPDNEFKNLGNMFKE 157 (448)
Q Consensus 86 ~k~~~~--~~~G~~~~~~------~~~~~~~sf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WP~~~~p~fr~~~~~ 157 (448)
+++... ..+||..... ...+.+++|......... .+.......|.||++ +|+||+++++
T Consensus 67 ~~~~~~~~~~~Gy~~~g~e~~~~~~~~D~kE~~~~~~~~~~~------------~~~~~~~~~n~wP~~-~p~fr~~~~~ 133 (312)
T 3oox_A 67 KQYAGVKGGARGYIPFGVETAKGADHYDLKEFWHMGRDLPPG------------HRFRAHMADNVWPAE-IPAFKHDVSW 133 (312)
T ss_dssp GGGBSSGGGTSEEECCCCCCSTTSCSCCCCEEEEECCCCCTT------------CGGGGTSCCCCCCTT-STTHHHHHHH
T ss_pred hhhccCCCCccccccccceecCCCCCCCceeeeEeecCCCcC------------CcchhccCCCCCCCc-CHHHHHHHHH
Confidence 999763 5678842110 112334444321110000 000112346789975 8999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcC--chhHHHHhhcCcCceeeecccCCCCchHHHhhhcccCCCCCCCCCCCCCCccccccc
Q 013170 158 LGFCMIELGLCLARICDKAIG--GQELEQSLLESSVAKGRLIHYHSTLDSVVLKEAGRKGRSSKKKGNPKSDQGQCIRSE 235 (448)
Q Consensus 158 y~~~m~~l~~~Ll~~la~~L~--~~~l~~~~~~~~~~~lRllhY~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (448)
|+.+|.+|+..|+++|+++|| +++|.+.+.. ..+.+|++||||.+..
T Consensus 134 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~-~~~~lr~~~Ypp~~~~------------------------------ 182 (312)
T 3oox_A 134 LYNSLDGMGGKVLEAIATYLKLERDFFKPTVQD-GNSVLRLLHYPPIPKD------------------------------ 182 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCTTTTHHHHTT-CCCEEEEEEECCCSSC------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcC-CcceeeeEecCCCCCC------------------------------
Confidence 999999999999999999997 6788888865 4678999999774431
Q ss_pred ccccccCCCCCCCccCcCCCCCCccceecccCCceeeEeCcccccccCCCCCCCCCCCCCCCCCcccEEEEcCCCCcEEE
Q 013170 236 KQTECTNVDGDSDEAGISGTHSNLWQQWHYDYGVFTVLTDPFFILPYYSSESRGSDQGCPSPGGHTYLQILDPNKNKVRM 315 (448)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~g~g~HtD~g~lTlL~q~~f~d~~~~~~~~~~~~~~p~p~g~~GLQV~~~~~G~Wi~ 315 (448)
...+|+++|||+|+||||+| | +++||||++ ++|+|++
T Consensus 183 --------------------~~~~g~~~HtD~g~lTlL~q----d------------------~v~GLqV~~-~~g~W~~ 219 (312)
T 3oox_A 183 --------------------ATGVRAGAHGDINTITLLLG----A------------------EEGGLEVLD-RDGQWLP 219 (312)
T ss_dssp --------------------CC--CEEEECCCSSEEEEEC----C------------------TTSCEEEEC-TTSCEEE
T ss_pred --------------------cCCcCccceecCceEEEEeE----c------------------CcCceEEEC-CCCcEEE
Confidence 02279999999999999988 3 356999987 6899999
Q ss_pred ccCCCCcEEeehhHHHHHHhCCcccCcccceecCCC-CCCCCeeEEEeeecCCCCCeEecCCCCccccccCCCCCCCCCC
Q 013170 316 VKSSPESFIIQVGESADILSKGKLRSTLHCVCRPTK-LENLSRETFVVFLQPAWNKTFSISDYPTENCNLSGQGSGAPDE 394 (448)
Q Consensus 316 V~p~p~a~VVNIGD~lqi~SNG~~kSt~HRVv~p~~-~~~~~R~Sia~F~~P~~d~~I~~p~~~~~~~~~~~~~~~~~~~ 394 (448)
|+|+||+|||||||+||+||||+||||+|||++|+. ....+|||+|||++|+.|++|+|++.|+.+
T Consensus 220 V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~------------- 286 (312)
T 3oox_A 220 INPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTA------------- 286 (312)
T ss_dssp CCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCS-------------
T ss_pred CCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCC-------------
Confidence 999999999999999999999999999999998642 135689999999999999999997766431
Q ss_pred CCCCcccchhhhHHhhhhcCCCCccccCCCCcHHHHHHHHHHhh
Q 013170 395 ENPPVKLGANKLAEAIQKMIPPLSSRLNDGMTFAEFSHETTRQY 438 (448)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~ppl~~r~~~~~tf~ef~~~~~~~y 438 (448)
..|+. |.+.+||+||+...++.+
T Consensus 287 ------------------~~p~~---y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 287 ------------------ENPDR---YPESITADEFLQQRLREI 309 (312)
T ss_dssp ------------------SSCCS---CSSCEEHHHHHHHHHHHH
T ss_pred ------------------CCccc---CCCCeeHHHHHHHHHHHh
Confidence 23543 323799999999998754
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=2.5e-60 Score=484.80 Aligned_cols=296 Identities=17% Similarity=0.154 Sum_probs=234.6
Q ss_pred CcceeEeCccccccccCCCCCCchhhHHHHHHHHHHHHHhhCCCCcEEEEEecCCCcHHHHHHHHHHHHHHhcCCHHHHH
Q 013170 7 LELYELPYSDLKLLCLDNTCSSSTEEIKRFETVRTSVMENLGPGGPGLLSITSVPNASIHRRNLLPLARKLALLNPDDRK 86 (448)
Q Consensus 7 ~~~~~id~sdl~~~~~~~~~~~~~~~~~~~~~~~~~I~~A~~~~G~G~l~~~gvp~~~el~~~l~~~a~~FF~LP~eeK~ 86 (448)
..||+|||+.|. +++ ...|.+++++|.+||++||||+|++|||| .+++++++..+++||+||.|+|+
T Consensus 45 ~~iPvIDls~l~----~~~-------~~~~~~~~~~l~~A~~~~GFF~v~nHGi~--~~l~~~~~~~~~~FF~lP~eeK~ 111 (356)
T 1gp6_A 45 PQVPTIDLKNIE----SDD-------EKIRENCIEELKKASLDWGVMHLINHGIP--ADLMERVKKAGEEFFSLSVEEKE 111 (356)
T ss_dssp CCCCEEECTTTT----CSC-------HHHHHHHHHHHHHHHHHTSEEEEESCSCC--HHHHHHHHHHHHHHHTSCHHHHG
T ss_pred CCCCEEEchhcc----CCC-------hHHHHHHHHHHHHHHHhCCEEEEeCCCCC--HHHHHHHHHHHHHHHCCCHHHHH
Confidence 369999999987 432 34578899999999999999999999999 89999999999999999999999
Q ss_pred hhccc----CCCCccccCCCCCCcccccccccccccccccccccccCCCCCCCcCCcCCCCCCCCcccHHHHHHHHHHHH
Q 013170 87 RLLKE----HHLGSDVSLKNPERNVSSFAMQLRYKQGLESTQCKFSSRADDNVKDQDLGQLPDNEFKNLGNMFKELGFCM 162 (448)
Q Consensus 87 k~~~~----~~~G~~~~~~~~~~~~~sf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WP~~~~p~fr~~~~~y~~~m 162 (448)
++... ..+||.... ........+|.+.+. .. ..+ ......+.||+. +|+||+++++|+..|
T Consensus 112 ~~~~~~~~~~~~Gy~~~~------~~~~~~~~d~kE~~~-~~------~~p-~~~~~~~~wP~~-~~~fr~~~~~y~~~~ 176 (356)
T 1gp6_A 112 KYANDQATGKIQGYGSKL------ANNASGQLEWEDYFF-HL------AYP-EEKRDLSIWPKT-PSDYIEATSEYAKCL 176 (356)
T ss_dssp GGBCBGGGTBCSEEECCC------CCSTTCCCCSCEEEE-EE------EES-GGGCCGGGSCCS-STTHHHHHHHHHHHH
T ss_pred hhcccccccCccccCcCc------ccCCCCCCChhheee-ee------cCC-ccccccccCCCc-chhhhHHHHHHHHHH
Confidence 99753 356774210 000111345554432 00 001 011345789974 899999999999999
Q ss_pred HHHHHHHHHHHHhhcC--chhHHHHhhc--CcCceeeecccCCCCchHHHhhhcccCCCCCCCCCCCCCCcccccccccc
Q 013170 163 IELGLCLARICDKAIG--GQELEQSLLE--SSVAKGRLIHYHSTLDSVVLKEAGRKGRSSKKKGNPKSDQGQCIRSEKQT 238 (448)
Q Consensus 163 ~~l~~~Ll~~la~~L~--~~~l~~~~~~--~~~~~lRllhY~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (448)
.+|+..|+++|+++|| +++|.+.+.. ...+.+|++|||| |+.+
T Consensus 177 ~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp-~~~~-------------------------------- 223 (356)
T 1gp6_A 177 RLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPK-CPQP-------------------------------- 223 (356)
T ss_dssp HHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECC-CSST--------------------------------
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCC-CCCc--------------------------------
Confidence 9999999999999987 5788888753 3467899888866 4421
Q ss_pred cccCCCCCCCccCcCCCCCCccceecccCCceeeEeCcccccccCCCCCCCCCCCCCCCCCcccEEEEcCCCCcEEEccC
Q 013170 239 ECTNVDGDSDEAGISGTHSNLWQQWHYDYGVFTVLTDPFFILPYYSSESRGSDQGCPSPGGHTYLQILDPNKNKVRMVKS 318 (448)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~g~g~HtD~g~lTlL~q~~f~d~~~~~~~~~~~~~~p~p~g~~GLQV~~~~~G~Wi~V~p 318 (448)
...+|+++|||+|+||||+| | .++||||+ ++|+|++|+|
T Consensus 224 -----------------~~~~g~~~HtD~g~lTlL~q----d------------------~v~GLQV~--~~g~Wi~V~p 262 (356)
T 1gp6_A 224 -----------------ELALGVEAHTDVSALTFILH----N------------------MVPGLQLF--YEGKWVTAKC 262 (356)
T ss_dssp -----------------TTCCSEEEECCCSSEEEEEE----C------------------SCCCEEEE--ETTEEEECCC
T ss_pred -----------------ccccCcCCccCCCeEEEEEE----c------------------CCCCeEEe--cCCcEEECcC
Confidence 13569999999999999988 3 25599999 5899999999
Q ss_pred CCCcEEeehhHHHHHHhCCcccCcccceecCCCCCCCCeeEEEeeecCCCCC-eEecCCCCccccccCCCCCCCCCCCCC
Q 013170 319 SPESFIIQVGESADILSKGKLRSTLHCVCRPTKLENLSRETFVVFLQPAWNK-TFSISDYPTENCNLSGQGSGAPDEENP 397 (448)
Q Consensus 319 ~p~a~VVNIGD~lqi~SNG~~kSt~HRVv~p~~~~~~~R~Sia~F~~P~~d~-~I~~p~~~~~~~~~~~~~~~~~~~~~~ 397 (448)
+||+|||||||+||+||||+||||+|||+++ ...+|||+|||++|+.|+ +|+|++.+..+
T Consensus 263 ~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~---~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~---------------- 323 (356)
T 1gp6_A 263 VPDSIVMHIGDTLEILSNGKYKSILHRGLVN---KEKVRISWAVFCEPPKDKIVLKPLPEMVSV---------------- 323 (356)
T ss_dssp CTTCEEEEECHHHHHHTTTSSCCCCEEECCC---SSCCEEEEEEEEECCTTTCEECCCGGGCCS----------------
T ss_pred CCCeEEEEeccHHHHhcCCEeeccCceecCC---CCCCEEEEEEeecCCCCCcEEeCChhhcCC----------------
Confidence 9999999999999999999999999999984 457999999999999999 99997665431
Q ss_pred CcccchhhhHHhhhhcCCCCccccCCCCcHHHHHHHHHHhhhCCC
Q 013170 398 PVKLGANKLAEAIQKMIPPLSSRLNDGMTFAEFSHETTRQYYGGG 442 (448)
Q Consensus 398 ~~~~~~~~~~~~~~~~~ppl~~r~~~~~tf~ef~~~~~~~y~~~~ 442 (448)
..|+. |+.+||+||+...++++++|+
T Consensus 324 ---------------~~p~~----y~~~t~~eyl~~~~~~~~d~~ 349 (356)
T 1gp6_A 324 ---------------ESPAK----FPPRTFAQHIEHKLFGKEQEE 349 (356)
T ss_dssp ---------------SSCCS----SCCEEHHHHHHHHHHHHHHHH
T ss_pred ---------------CCCcc----CCCccHHHHHHHHHHhccCcc
Confidence 23543 577999999999998887554
No 3
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=2e-59 Score=473.69 Aligned_cols=302 Identities=12% Similarity=0.159 Sum_probs=232.2
Q ss_pred CCccccCcceeEeCccccccccCCCCCCchhhHHHHHHHHHHHHHhhCCCCcEEEEEecCCCcHHHHHHHHHHHHHH-hc
Q 013170 1 MAEAEILELYELPYSDLKLLCLDNTCSSSTEEIKRFETVRTSVMENLGPGGPGLLSITSVPNASIHRRNLLPLARKL-AL 79 (448)
Q Consensus 1 ~~~~~~~~~~~id~sdl~~~~~~~~~~~~~~~~~~~~~~~~~I~~A~~~~G~G~l~~~gvp~~~el~~~l~~~a~~F-F~ 79 (448)
|++.+...||+|||+.|. +++ ...|.+++++|.+||++||||+|++||| ++++++..+++| |+
T Consensus 1 m~s~~~~~iPvIDls~l~----~~~-------~~~~~~~~~~l~~A~~~~GFf~v~nHGi-----l~~~~~~~~~~F~F~ 64 (331)
T 1odm_A 1 MGSVSKANVPKIDVSPLF----GDD-------QAAKMRVAQQIDAASRDTGFFYAVNHGI-----NVQRLSQKTKEFHMS 64 (331)
T ss_dssp --CCCBCCCCEEECGGGG----SSC-------HHHHHHHHHHHHHHHHTTSEEEEESCCC-----CHHHHHHHHHHHHHH
T ss_pred CCcccCCCCCEEEchHhc----CCC-------hHHHHHHHHHHHHHHHhCCEEEEEccce-----eHHHHHHHHHhccCC
Confidence 888888999999999997 432 3567889999999999999999998888 889999999999 99
Q ss_pred CCHHHHHhhcccCCCCccccCCCCCCcccccc----cccccccccccccccccCCCCCC-------CcCCcCCCCCCC-C
Q 013170 80 LNPDDRKRLLKEHHLGSDVSLKNPERNVSSFA----MQLRYKQGLESTQCKFSSRADDN-------VKDQDLGQLPDN-E 147 (448)
Q Consensus 80 LP~eeK~k~~~~~~~G~~~~~~~~~~~~~sf~----~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~WP~~-~ 147 (448)
||.|+|+++.. +||....... ....|. ...+|.+.+. . .....+. .+...+|.||+. .
T Consensus 65 lP~eeK~~~~~---~Gy~~~~~e~--~~~~~~~~~~~~~d~kE~~~--~---~~~~~~~~p~~~~~~~~~~~n~wP~~~~ 134 (331)
T 1odm_A 65 ITPEEKWDLAI---RAYNKEHQDQ--VRAGYYLSIPGKKAVESFCY--L---NPNFTPDHPRIQAKTPTHEVNVWPDETK 134 (331)
T ss_dssp CCHHHHHHHBC---TTTCTTCTTC--SSSEEECCBTTTBCCEEEEE--C---CTTCCTTSHHHHTTCTTCCCCCCCCTTT
T ss_pred CCHHHHHhhhh---cCCCcCCccc--cccccccccCCCCChhheEe--c---ccCCccccccccccccccCCCCCCCCCC
Confidence 99999999975 6774211000 000000 1223433321 0 0000000 012346889973 2
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhhcC--chhHHHHhhcCcCceee--ecccC------C--CCchHHHhhhcccC
Q 013170 148 FKNLGNMFKELGFCMIELGLCLARICDKAIG--GQELEQSLLESSVAKGR--LIHYH------S--TLDSVVLKEAGRKG 215 (448)
Q Consensus 148 ~p~fr~~~~~y~~~m~~l~~~Ll~~la~~L~--~~~l~~~~~~~~~~~lR--llhY~------P--~~~~~~~~~~~~~~ 215 (448)
+|+||+++++|++.|.+|+..|+++|+++|| +++|.+.+.. ..+.+| ++||| | .|+.+
T Consensus 135 ~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~-~~~~lr~~l~~YP~~~~~~p~~~~~~~--------- 204 (331)
T 1odm_A 135 HPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHFKP-DDTLASVVLIRYPYLDPYPEAAIKTAA--------- 204 (331)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTGGGCCT-TTCCCEEEEEEECCCSSCCGGGCEECT---------
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcC-cHHHHHHHHhhCCCcccccccccCCCc---------
Confidence 8999999999999999999999999999987 6788887764 567899 99998 4 24321
Q ss_pred CCCCCCCCCCCCCcccccccccccccCCCCCCCccCcCCCCCCccceecccCCceeeEeCcccccccCCCCCCCCCCCCC
Q 013170 216 RSSKKKGNPKSDQGQCIRSEKQTECTNVDGDSDEAGISGTHSNLWQQWHYDYGVFTVLTDPFFILPYYSSESRGSDQGCP 295 (448)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~HtD~g~lTlL~q~~f~d~~~~~~~~~~~~~~p 295 (448)
+ ...+|+++|||+|+||||+| |
T Consensus 205 -------------------~--------------------~~~~g~~~HtD~g~lTlL~q----d--------------- 226 (331)
T 1odm_A 205 -------------------D--------------------GTKLSFEWHEDVSLITVLYQ----S--------------- 226 (331)
T ss_dssp -------------------T--------------------SCEEEEEEECCSSSEEEEEE----C---------------
T ss_pred -------------------c--------------------ccccccccccCCCeEEEEee----C---------------
Confidence 1 12579999999999999988 3
Q ss_pred CCCCcccEEEEcCCCCcEEEccCCCCcEEeehhHHHHHHhCCcccCcccceecCCCCCCCCeeEEEeeecCCCCCeEecC
Q 013170 296 SPGGHTYLQILDPNKNKVRMVKSSPESFIIQVGESADILSKGKLRSTLHCVCRPTKLENLSRETFVVFLQPAWNKTFSIS 375 (448)
Q Consensus 296 ~p~g~~GLQV~~~~~G~Wi~V~p~p~a~VVNIGD~lqi~SNG~~kSt~HRVv~p~~~~~~~R~Sia~F~~P~~d~~I~~p 375 (448)
+++||||++ ++| |++|+|+||+|||||||+||+||||+||||+|||++| ..+|||+|||++|+.|++|+|+
T Consensus 227 ---~v~GLQV~~-~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~----~~~R~Sia~F~~P~~d~~i~pl 297 (331)
T 1odm_A 227 ---NVQNLQVET-AAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV----NAERQSLPFFVNLGYDSVIDPF 297 (331)
T ss_dssp ---SSCCEEEEE-TTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC----CSCEEEEEEEECCCTTCBCCCC
T ss_pred ---CCCCEEEEc-CCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC----CCCEEEEEEEEcCCCCCEEeCC
Confidence 356999998 688 9999999999999999999999999999999999874 5689999999999999999998
Q ss_pred CCCccccccCCCCCCCCCCCCCCcccchhhhHHhhhhcCCCCccccCCCCcHHHHHHHHHHhhhCC
Q 013170 376 DYPTENCNLSGQGSGAPDEENPPVKLGANKLAEAIQKMIPPLSSRLNDGMTFAEFSHETTRQYYGG 441 (448)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppl~~r~~~~~tf~ef~~~~~~~y~~~ 441 (448)
+.+..+ + . +. |+.+||+||+...++++++-
T Consensus 298 ~~~~~~---------------------------~----~-~~----y~~~t~~e~l~~~~~~~~~~ 327 (331)
T 1odm_A 298 DPREPN---------------------------G----K-SD----REPLSYGDYLQNGLVSLINK 327 (331)
T ss_dssp CTTSTT---------------------------C----C-CS----SCCCBHHHHHHHHHHHHHHH
T ss_pred Cccccc---------------------------c----c-cC----CCCccHHHHHHHHHHHHHHh
Confidence 776531 1 1 21 46699999999999999873
No 4
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=4.3e-60 Score=476.64 Aligned_cols=291 Identities=11% Similarity=0.117 Sum_probs=228.5
Q ss_pred cceeEeCccccccccCCCCCCchhhHHHHHHHHHHHHHhhCCCCcEEEEEecCCCcHHHHHHHHHHHHHHhcCCHHHHHh
Q 013170 8 ELYELPYSDLKLLCLDNTCSSSTEEIKRFETVRTSVMENLGPGGPGLLSITSVPNASIHRRNLLPLARKLALLNPDDRKR 87 (448)
Q Consensus 8 ~~~~id~sdl~~~~~~~~~~~~~~~~~~~~~~~~~I~~A~~~~G~G~l~~~gvp~~~el~~~l~~~a~~FF~LP~eeK~k 87 (448)
.||+|||++|. + ..+.+++++|.+||++||||+|++|||| .+++++++..+++||+||.|+|++
T Consensus 3 ~iPvIDls~l~----~----------~~~~~~~~~l~~A~~~~GFF~v~nHGi~--~~l~~~~~~~~~~FF~lP~e~K~~ 66 (319)
T 1w9y_A 3 NFPIISLDKVN----G----------VERAATMEMIKDACENWGFFELVNHGIP--REVMDTVEKMTKGHYKKCMEQRFK 66 (319)
T ss_dssp CCCEEEGGGGG----S----------TTHHHHHHHHHHHHHHTSEEEEESCSSC--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEECcccC----c----------ccHHHHHHHHHHHHHhCCEEEEEcCCCC--HHHHHHHHHHHHHHHcCCHHHHhh
Confidence 59999999986 2 1367899999999999999999999999 999999999999999999999999
Q ss_pred hcccCCCCccccCCCCCCcccccccccccccccccccccccCCCCCCCcCCcCCCCCCCCcccHHHHHHHHHHHHHHHHH
Q 013170 88 LLKEHHLGSDVSLKNPERNVSSFAMQLRYKQGLESTQCKFSSRADDNVKDQDLGQLPDNEFKNLGNMFKELGFCMIELGL 167 (448)
Q Consensus 88 ~~~~~~~G~~~~~~~~~~~~~sf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WP~~~~p~fr~~~~~y~~~m~~l~~ 167 (448)
+... .+||... . ......+|.+.+. +.. .+....+.||+. +|+||+++++|+..|.+|+.
T Consensus 67 ~~~~-~~Gy~~~-~-------~e~~~~d~ke~~~---------~~~-~p~~~~~~wP~~-~~~fr~~~~~y~~~~~~l~~ 126 (319)
T 1w9y_A 67 ELVA-SKALEGV-Q-------AEVTDMDWESTFF---------LKH-LPISNISEVPDL-DEEYREVMRDFAKRLEKLAE 126 (319)
T ss_dssp HHHH-HHHHTTC-C-------CCGGGCCCCEEEE---------EEE-ESCCGGGGCTTC-CHHHHHHHHHHHHHHHHHHH
T ss_pred hccC-CCCCCcc-c-------ccCCCCChhhhee---------eec-CCcccccccccc-hhHHHHHHHHHHHHHHHHHH
Confidence 8643 2366421 0 0012345555432 000 011235779974 89999999999999999999
Q ss_pred HHHHHHHhhcC--chhHHHHhhc--CcCceeeecccCCCCchHHHhhhcccCCCCCCCCCCCCCCcccccccccccccCC
Q 013170 168 CLARICDKAIG--GQELEQSLLE--SSVAKGRLIHYHSTLDSVVLKEAGRKGRSSKKKGNPKSDQGQCIRSEKQTECTNV 243 (448)
Q Consensus 168 ~Ll~~la~~L~--~~~l~~~~~~--~~~~~lRllhY~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (448)
.|+++|+++|| +++|.+.+.. ...+.+|++|||| |+.+ +
T Consensus 127 ~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp-~~~~----------------------------~-------- 169 (319)
T 1w9y_A 127 ELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPP-CPKP----------------------------D-------- 169 (319)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEECCC-CSCG----------------------------G--------
T ss_pred HHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEEecCC-Cccc----------------------------c--------
Confidence 99999999987 6788888763 2456899888876 4431 1
Q ss_pred CCCCCccCcCCCCCCccceecccCCceeeEeCcccccccCCCCCCCCCCCCCCCCCcccEEEEcCCCCcEEEccCCCCcE
Q 013170 244 DGDSDEAGISGTHSNLWQQWHYDYGVFTVLTDPFFILPYYSSESRGSDQGCPSPGGHTYLQILDPNKNKVRMVKSSPESF 323 (448)
Q Consensus 244 ~~~~~~~~~~~~~~~~g~g~HtD~g~lTlL~q~~f~d~~~~~~~~~~~~~~p~p~g~~GLQV~~~~~G~Wi~V~p~p~a~ 323 (448)
..+|+++|||+|+||||+| |+ +++||||+ ++|+|++|+|+||+|
T Consensus 170 -------------~~~g~~~HtD~g~lTlL~q----d~-----------------~v~GLQV~--~~g~Wi~V~p~pgal 213 (319)
T 1w9y_A 170 -------------LIKGLRAHTDAGGIILLFQ----DD-----------------KVSGLQLL--KDGQWIDVPPMRHSI 213 (319)
T ss_dssp -------------GGSSCCCBCCSSSEEEEEE----SS-----------------SCCCEEEE--ETTEEEECCCCTTCE
T ss_pred -------------cccccccccCCCceEEEEe----cC-----------------CCCeeeEe--eCCeEEEcccCCCcE
Confidence 2459999999999999988 32 35699998 589999999999999
Q ss_pred EeehhHHHHHHhCCcccCcccceecCCCCCCCCeeEEEeeecCCCCCeEecCCCCccccccCCCCCCCCCCCCCCcccch
Q 013170 324 IIQVGESADILSKGKLRSTLHCVCRPTKLENLSRETFVVFLQPAWNKTFSISDYPTENCNLSGQGSGAPDEENPPVKLGA 403 (448)
Q Consensus 324 VVNIGD~lqi~SNG~~kSt~HRVv~p~~~~~~~R~Sia~F~~P~~d~~I~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (448)
||||||+||+||||+||||+|||+++ ...+|||+|||++|+.|++|.|++.+..+
T Consensus 214 vVNiGD~l~~~SnG~~kS~~HRVv~~---~~~~R~Sia~F~~p~~d~~i~pl~~l~~~---------------------- 268 (319)
T 1w9y_A 214 VVNLGDQLEVITNGKYKSVMHRVIAQ---KDGARMSLASFYNPGSDAVIYPAPALVEK---------------------- 268 (319)
T ss_dssp EEEECHHHHHHTTTSSCCCCEEECCC---SSSCCEEEEEEEECCTTCEECCCGGGC------------------------
T ss_pred EEEhHHHHHHHhCCeeecccceecCC---CCCCceEEEEEecCCCCCeEeCchhhcCc----------------------
Confidence 99999999999999999999999984 46789999999999999999987665431
Q ss_pred hhhHHhhhhcCCCCccccCCCCcHHHHHHHHHHhhhCCC
Q 013170 404 NKLAEAIQKMIPPLSSRLNDGMTFAEFSHETTRQYYGGG 442 (448)
Q Consensus 404 ~~~~~~~~~~~ppl~~r~~~~~tf~ef~~~~~~~y~~~~ 442 (448)
+. ...|+. |+.+||+||+...+++++.++
T Consensus 269 -----~~-~~~p~~----Y~~~t~~ey~~~~~~~~~~~~ 297 (319)
T 1w9y_A 269 -----EA-EENKQV----YPKFVFDDYMKLYAGLKFQAK 297 (319)
T ss_dssp ------------CC----CCCEEHHHHHHTTTTTTCSSH
T ss_pred -----cc-ccCccc----cCcEeHHHHHHHHHhhhcCcc
Confidence 00 002442 467999999999888887654
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.3e-56 Score=449.76 Aligned_cols=286 Identities=15% Similarity=0.149 Sum_probs=213.7
Q ss_pred CcceeEeCccccccccCCCCCCchhhHHHHHHHHHHHHHhhCCCCcEEEEEecCCCcHHHHHHHHHHHHHHhcCC-HHHH
Q 013170 7 LELYELPYSDLKLLCLDNTCSSSTEEIKRFETVRTSVMENLGPGGPGLLSITSVPNASIHRRNLLPLARKLALLN-PDDR 85 (448)
Q Consensus 7 ~~~~~id~sdl~~~~~~~~~~~~~~~~~~~~~~~~~I~~A~~~~G~G~l~~~gvp~~~el~~~l~~~a~~FF~LP-~eeK 85 (448)
..||+|||+.|. +++ . .++|.+||++||||+|++|||| .+++++++..+++||+|| .|+|
T Consensus 3 ~~iPvIDls~l~----~~~---------~----~~~l~~A~~~~GFf~l~nHGi~--~~l~~~~~~~~~~fF~lP~~e~K 63 (311)
T 1dcs_A 3 TTVPTFSLAELQ----QGL---------H----QDEFRRCLRDKGLFYLTDCGLT--DTELKSAKDLVIDFFEHGSEAEK 63 (311)
T ss_dssp CCCCEEEHHHHH----TTC---------S----HHHHHHHHHHTCEEEEESSSCC--HHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCCcEEEchhhc----CCC---------H----HHHHHHHHHhCcEEEEECCCCC--HHHHHHHHHHHHHHHcCCcHHHh
Confidence 469999999987 432 0 1289999999999999999999 999999999999999999 9999
Q ss_pred Hhhccc---CCCCccccCCCCCCccccc------ccccccccccccccccccCCCCCCCcCCcCCCCCCCCcccHHHHHH
Q 013170 86 KRLLKE---HHLGSDVSLKNPERNVSSF------AMQLRYKQGLESTQCKFSSRADDNVKDQDLGQLPDNEFKNLGNMFK 156 (448)
Q Consensus 86 ~k~~~~---~~~G~~~~~~~~~~~~~sf------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WP~~~~p~fr~~~~ 156 (448)
+++... ..+||.... .+.+ ....+|.+.+. +.. .+|.|| +|+||++++
T Consensus 64 ~~~~~~~~~~~~Gy~~~~------~e~~~~~~~~~~~~d~~E~~~---------~~~-----~~n~wP---~~~fr~~~~ 120 (311)
T 1dcs_A 64 RAVTSPVPTMRRGFTGLE------SESTAQITNTGSYSDYSMCYS---------MGT-----ADNLFP---SGDFERIWT 120 (311)
T ss_dssp HHTBCSSCCSSSEEEEC-----------------------CEEEE---------ECS-----SSCCCS---CHHHHHHHH
T ss_pred HHhhccCCCCCCceeecc------ccccccccCCCCCCCcceeee---------ccC-----CCCCCC---ChHHHHHHH
Confidence 999764 457885210 1111 11235554431 111 157899 799999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCc--hhHHHHhhcCcCceeeecccCCCCchHHHhhhcccCCCCCCCCCCCCCCcccccc
Q 013170 157 ELGFCMIELGLCLARICDKAIGG--QELEQSLLESSVAKGRLIHYHSTLDSVVLKEAGRKGRSSKKKGNPKSDQGQCIRS 234 (448)
Q Consensus 157 ~y~~~m~~l~~~Ll~~la~~L~~--~~l~~~~~~~~~~~lRllhY~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (448)
+|+..|.+|+..|+++|+++||- +.-.+.|.+. .+.+|++|||| |+.+
T Consensus 121 ~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~-~~~lrl~~YPp-~~~~---------------------------- 170 (311)
T 1dcs_A 121 QYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDC-EPLLRFRYFPQ-VPEH---------------------------- 170 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSC-CCEEEEEEECC---------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhc-chhhheecCCC-CCcc----------------------------
Confidence 99999999999999999999863 1112233322 67899999976 4321
Q ss_pred cccccccCCCCCCCccCcCCCCCCccceecccCCceeeEeCcccccccCCCCCCCCCCCCCCCCCccc---EEEEcCCCC
Q 013170 235 EKQTECTNVDGDSDEAGISGTHSNLWQQWHYDYGVFTVLTDPFFILPYYSSESRGSDQGCPSPGGHTY---LQILDPNKN 311 (448)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~g~HtD~g~lTlL~q~~f~d~~~~~~~~~~~~~~p~p~g~~G---LQV~~~~~G 311 (448)
+ .. ....+|+++|||+|+||||+| |. +++| |||++ +|
T Consensus 171 ~-~~----------------~~~~~g~~~HtD~g~lTlL~q----d~-----------------~v~G~~~LqV~~--~g 210 (311)
T 1dcs_A 171 R-SA----------------EEQPLRMAPHYDLSMVTLIQQ----TP-----------------CANGFVSLQAEV--GG 210 (311)
T ss_dssp ------------------------CCEEEEEECSSEEEEEE----EC-----------------CTTCCCCEEEEE--TT
T ss_pred c-cc----------------CccccccccccCCCeEEEEec----CC-----------------CCCCceeEEEEe--CC
Confidence 0 00 002569999999999999988 41 2558 99995 79
Q ss_pred cEEEccCCCCcEEeehhHHHHHHhCCcccCcccceecCCC--CCCCCeeEEEeeecCCCCCeEecCCCCccccccCCCCC
Q 013170 312 KVRMVKSSPESFIIQVGESADILSKGKLRSTLHCVCRPTK--LENLSRETFVVFLQPAWNKTFSISDYPTENCNLSGQGS 389 (448)
Q Consensus 312 ~Wi~V~p~p~a~VVNIGD~lqi~SNG~~kSt~HRVv~p~~--~~~~~R~Sia~F~~P~~d~~I~~p~~~~~~~~~~~~~~ 389 (448)
+|++|+|+||+|||||||+||+||||+||||+|||++++. ....+|||||||++|+.|++|. ++.+..
T Consensus 211 ~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~--------- 280 (311)
T 1dcs_A 211 AFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARE--------- 280 (311)
T ss_dssp EEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHH---------
T ss_pred EEEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccC---------
Confidence 9999999999999999999999999999999999998642 1267899999999999999999 665532
Q ss_pred CCCCCCCCCcccchhhhHHhhhhcCCCCccccC--CCCcHHHHHHHHHHhhhC
Q 013170 390 GAPDEENPPVKLGANKLAEAIQKMIPPLSSRLN--DGMTFAEFSHETTRQYYG 440 (448)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~ppl~~r~~--~~~tf~ef~~~~~~~y~~ 440 (448)
...|+. | +.+||+||+...+++.|.
T Consensus 281 ----------------------~~~p~~----y~~~~~t~~ey~~~~~~~~~~ 307 (311)
T 1dcs_A 281 ----------------------CGFDVS----LDGETATFQDWIGGNYVNIRR 307 (311)
T ss_dssp ----------------------TTCCCC----CCSSEEEHHHHHCSSCCCEEC
T ss_pred ----------------------CCCccc----cCCCCccHHHHHHHHHHHHhc
Confidence 123443 4 679999999998887775
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.4e-54 Score=429.08 Aligned_cols=249 Identities=18% Similarity=0.128 Sum_probs=194.1
Q ss_pred CcceeEeCccccccccCCCCCCchhhHHHHHHHHHHHHHhhCCCCcEEEEEecCCCcHHHHHHHHHHHHHHhcCCHHHHH
Q 013170 7 LELYELPYSDLKLLCLDNTCSSSTEEIKRFETVRTSVMENLGPGGPGLLSITSVPNASIHRRNLLPLARKLALLNPDDRK 86 (448)
Q Consensus 7 ~~~~~id~sdl~~~~~~~~~~~~~~~~~~~~~~~~~I~~A~~~~G~G~l~~~gvp~~~el~~~l~~~a~~FF~LP~eeK~ 86 (448)
+.||+|||++.. .+++|.+||++||||+|+||||| .+++++++..+++||+| |+|+
T Consensus 2 ~~IPvIDls~~~--------------------~~~~l~~A~~~~GFF~v~nHGi~--~~li~~~~~~~~~FF~l--e~K~ 57 (280)
T 3on7_A 2 MKLETIDYRAAD--------------------SAKRFVESLRETGFGVLSNHPID--KELVERIYTEWQAFFNS--EAKN 57 (280)
T ss_dssp --CCEEETTSTT--------------------HHHHHHHHHHHHSEEEEESCSSC--HHHHHHHHHHHHHHHTS--GGGG
T ss_pred CCCCEEECCChh--------------------HHHHHHHHHHhCCEEEEECCCCC--HHHHHHHHHHHHHHhhh--HHHH
Confidence 479999999744 46899999999999999999999 99999999999999998 7899
Q ss_pred hhccc--CCCCccccCCCCCCccccc--ccccccccccccccccccCCCCCCCcCCcCCCCCCCCcccHHHHHHHHHHHH
Q 013170 87 RLLKE--HHLGSDVSLKNPERNVSSF--AMQLRYKQGLESTQCKFSSRADDNVKDQDLGQLPDNEFKNLGNMFKELGFCM 162 (448)
Q Consensus 87 k~~~~--~~~G~~~~~~~~~~~~~sf--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WP~~~~p~fr~~~~~y~~~m 162 (448)
++... ..+||.... ..+.. ....+|.+.+ ....||. .+|+||+++.+|+.+|
T Consensus 58 k~~~~~~~~~GY~~~~-----~~e~~~~~~~~D~kE~~------------------~~~p~~~-~p~~fr~~~~~y~~~~ 113 (280)
T 3on7_A 58 EFMFNRETHDGFFPAS-----ISETAKGHTVKDIKEYY------------------HVYPWGR-IPDSLRANILAYYEKA 113 (280)
T ss_dssp GGBCCTTTCCEEECCC-------------CCCCSCEEE------------------EECTTSC-CCGGGHHHHHHHHHHH
T ss_pred HhccCCCCCCccccCc-----cccccCCCCcccHHHHH------------------hcCCCCC-CCHHHHHHHHHHHHHH
Confidence 98653 467884210 00000 0012333321 0113775 3789999999999999
Q ss_pred HHHHHHHHHHHHhhcCch-------hHHHHhhcCcCceeeecccCCCCchHHHhhhcccCCCCCCCCCCCCCCccccccc
Q 013170 163 IELGLCLARICDKAIGGQ-------ELEQSLLESSVAKGRLIHYHSTLDSVVLKEAGRKGRSSKKKGNPKSDQGQCIRSE 235 (448)
Q Consensus 163 ~~l~~~Ll~~la~~L~~~-------~l~~~~~~~~~~~lRllhY~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (448)
.+|+..|+++|+++|+.+ .|.+.+..+..+.+|++||||.+.. +
T Consensus 114 ~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~-----------------------------~ 164 (280)
T 3on7_A 114 NTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRILHYPPMTGD-----------------------------E 164 (280)
T ss_dssp HHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEEEECCCCTT-----------------------------C
T ss_pred HHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCccceEEEEECCCCCCc-----------------------------c
Confidence 999999999999999732 1456665554578999998764321 0
Q ss_pred ccccccCCCCCCCccCcCCCCCCccceecccCCceeeEeCcccccccCCCCCCCCCCCCCCCCCcccEEEEcCCCCcEEE
Q 013170 236 KQTECTNVDGDSDEAGISGTHSNLWQQWHYDYGVFTVLTDPFFILPYYSSESRGSDQGCPSPGGHTYLQILDPNKNKVRM 315 (448)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~g~g~HtD~g~lTlL~q~~f~d~~~~~~~~~~~~~~p~p~g~~GLQV~~~~~G~Wi~ 315 (448)
....+|+++|||+|+||+|+| | +++||||++ ++|+|++
T Consensus 165 -------------------~~~~~g~~~HtD~g~lTlL~q----d------------------~~~GLqV~~-~~g~W~~ 202 (280)
T 3on7_A 165 -------------------EMGAIRAAAHEDINLITVLPT----A------------------NEPGLQVKA-KDGSWLD 202 (280)
T ss_dssp -------------------CCCSEEEEEECCCSSEEEEEC----C------------------SCCCEEEEC-TTSCEEE
T ss_pred -------------------ccCcccccCCCCCCeEEEEEe----c------------------CCCCeEEEc-CCCCEEE
Confidence 014579999999999999988 3 355999998 6899999
Q ss_pred ccCCCCcEEeehhHHHHHHhCCcccCcccceecCCC-CCCCCeeEEEeeecCCCCCeEec
Q 013170 316 VKSSPESFIIQVGESADILSKGKLRSTLHCVCRPTK-LENLSRETFVVFLQPAWNKTFSI 374 (448)
Q Consensus 316 V~p~p~a~VVNIGD~lqi~SNG~~kSt~HRVv~p~~-~~~~~R~Sia~F~~P~~d~~I~~ 374 (448)
|+|+||+|||||||+||+||||+||||+|||++|+. ....+|||+|||++|+.|++|+|
T Consensus 203 V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p 262 (280)
T 3on7_A 203 VPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE 262 (280)
T ss_dssp CCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS
T ss_pred CcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC
Confidence 999999999999999999999999999999998753 23578999999999999998763
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=72.46 E-value=8.1 Score=36.72 Aligned_cols=48 Identities=27% Similarity=0.279 Sum_probs=33.4
Q ss_pred ccEEEEcCCCCcEEEccCCCCcEEeehhHHHHHHhCCcccCcccceecCCCCCCCCeeEEEeeec
Q 013170 301 TYLQILDPNKNKVRMVKSSPESFIIQVGESADILSKGKLRSTLHCVCRPTKLENLSRETFVVFLQ 365 (448)
Q Consensus 301 ~GLQV~~~~~G~Wi~V~p~p~a~VVNIGD~lqi~SNG~~kSt~HRVv~p~~~~~~~R~Sia~F~~ 365 (448)
+.|.+.+ ..+ -+.|+|..|.+||--. .++|+|.. .....|+++..+++
T Consensus 147 Getvf~~-~~~-~~~V~P~~G~~v~F~s------------~~lH~v~p---V~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 147 GELVIQD-TYG-QQSIKLSAGSLVLYPS------------SSLHQVTP---VLSGERTAAFMWLQ 194 (243)
T ss_dssp CCEEEEE-TTE-EEEECCCTTCEEEEET------------TSEEEECC---EEEECEEEEEEEEE
T ss_pred ceEEEee-CCC-cEEEecCCCEEEEECC------------CCeEcCcc---ccccCEEEEEEehh
Confidence 3577764 223 4679999998887531 37999965 23457999998885
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=63.28 E-value=5.4 Score=37.84 Aligned_cols=77 Identities=13% Similarity=0.133 Sum_probs=48.0
Q ss_pred cceecccCC-----ceeeEeCcccccccCCCCCCCCCCCCCCCCCcccEEEEcCCCCcEEEccCCCCcEEeehhHHHHHH
Q 013170 260 WQQWHYDYG-----VFTVLTDPFFILPYYSSESRGSDQGCPSPGGHTYLQILDPNKNKVRMVKSSPESFIIQVGESADIL 334 (448)
Q Consensus 260 g~g~HtD~g-----~lTlL~q~~f~d~~~~~~~~~~~~~~p~p~g~~GLQV~~~~~G~Wi~V~p~p~a~VVNIGD~lqi~ 334 (448)
...+|.|.. .+|+|+ |.++.-. .+..++-|.+.+..++..+.|.|..|.+|+.-.+
T Consensus 130 ~y~~H~D~~~~~~R~~T~vl---YLN~~w~-----------~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~----- 190 (247)
T 2hbt_A 130 GYVRHVDNPNGDGRCVTCIY---YLNKDWD-----------AKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSD----- 190 (247)
T ss_dssp CEEEECSSCSCCSEEEEEEE---ECBTTCC-----------HHHHBCCEEECCTTCSSCEEECCBTTEEEEEECS-----
T ss_pred cccccccCCCCCCceEEEEE---EeCCCCC-----------CCCCceeEEEecCCCCceEEEEcCCCEEEEEecC-----
Confidence 467888873 577775 5553100 0011335888752223568999999998876532
Q ss_pred hCCcccCcccceecCCCCCCCCeeEEEeee
Q 013170 335 SKGKLRSTLHCVCRPTKLENLSRETFVVFL 364 (448)
Q Consensus 335 SNG~~kSt~HRVv~p~~~~~~~R~Sia~F~ 364 (448)
. -++|.|.. ....|+||+..+
T Consensus 191 --~---~~~H~V~p----~~~~R~sit~W~ 211 (247)
T 2hbt_A 191 --R---RNPHEVQP----AYATRYAITVWY 211 (247)
T ss_dssp --T---TCCEEECC----BSSCEEEEEEEE
T ss_pred --C---Cceeeecc----CCCEEEEEEEEE
Confidence 1 16999964 245899998755
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=62.86 E-value=23 Score=32.69 Aligned_cols=44 Identities=11% Similarity=-0.061 Sum_probs=31.7
Q ss_pred CcEEEccCCCCcEEeehhHHHHHHhCCcccCcccceecCCCCCCCCeeEEEeeecCCC
Q 013170 311 NKVRMVKSSPESFIIQVGESADILSKGKLRSTLHCVCRPTKLENLSRETFVVFLQPAW 368 (448)
Q Consensus 311 G~Wi~V~p~p~a~VVNIGD~lqi~SNG~~kSt~HRVv~p~~~~~~~R~Sia~F~~P~~ 368 (448)
..++.|.|.+|.+||-=.. .+|.|..- .++..|+||+|.+.|..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~--~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMN--MAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCC--CSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCC--CCCCCEEEEEEEeecCC
Confidence 3566889999999986542 57999752 23568999999987753
No 10
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=45.12 E-value=40 Score=31.54 Aligned_cols=45 Identities=11% Similarity=0.036 Sum_probs=32.1
Q ss_pred CcEEEccCCCCcEEeehhHHHHHHhCCcccCcccceecCCCCCCCCeeEEEeee
Q 013170 311 NKVRMVKSSPESFIIQVGESADILSKGKLRSTLHCVCRPTKLENLSRETFVVFL 364 (448)
Q Consensus 311 G~Wi~V~p~p~a~VVNIGD~lqi~SNG~~kSt~HRVv~p~~~~~~~R~Sia~F~ 364 (448)
+..+.+...+++++|.-|++=..|. |.|-.- ......|+|+.|=.
T Consensus 184 ~~~~~i~L~~gsllvM~G~~r~~w~--------H~I~~~-~~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 184 VERVKIPLDHGTLLIMEGATQADWQ--------HRVPKE-YHSREPRVNLTFRT 228 (238)
T ss_dssp CCEEEEEECTTCEEEEEETHHHHEE--------EEECCC-SSCCCCEEEEEEEC
T ss_pred CceEEEEcCCCCEEEEChhhhCccE--------ecCCCc-CCCCCCEEEEEeee
Confidence 4688999999999999999866664 444321 11245799998643
No 11
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=29.05 E-value=95 Score=29.36 Aligned_cols=35 Identities=11% Similarity=0.074 Sum_probs=24.3
Q ss_pred HHHHhhCCCCcEEEEEecCCCcHHHHHHHHHHHHHHhc
Q 013170 42 SVMENLGPGGPGLLSITSVPNASIHRRNLLPLARKLAL 79 (448)
Q Consensus 42 ~I~~A~~~~G~G~l~~~gvp~~~el~~~l~~~a~~FF~ 79 (448)
+..+.+. .-|++++.|+= ..+.++++.+.+.++++
T Consensus 26 e~~~~f~--~dGyvvl~~~l-~~e~v~~l~~~~~~~~~ 60 (308)
T 2a1x_A 26 EQRKFYE--ENGFLVIKNLV-PDADIQRFRNEFEKICR 60 (308)
T ss_dssp THHHHHH--HHSEEEETTCS-CHHHHHHHHHHHHHHHT
T ss_pred HHHHHHH--hCCEEEccCCC-CHHHHHHHHHHHHHHHh
Confidence 3345666 34788889843 28888888887777654
No 12
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=27.32 E-value=49 Score=30.17 Aligned_cols=46 Identities=13% Similarity=0.138 Sum_probs=30.2
Q ss_pred EEEccCCCCcEEeehhHHHHHHhCCcc-cCcccceecCCCCCCCCeeEEEeeec
Q 013170 313 VRMVKSSPESFIIQVGESADILSKGKL-RSTLHCVCRPTKLENLSRETFVVFLQ 365 (448)
Q Consensus 313 Wi~V~p~p~a~VVNIGD~lqi~SNG~~-kSt~HRVv~p~~~~~~~R~Sia~F~~ 365 (448)
-+.|.|..|..||--- ...+|.. ..++|+|.. .....|+++..++.
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~P---V~~G~K~~~~~Wi~ 216 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCP---TLKGDKWSATKWIH 216 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECC---EEESEEEEEEEEEE
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCc---cccceEEEEEEeEE
Confidence 4789999887666421 1223433 679999965 23347999988775
No 13
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=24.44 E-value=96 Score=28.52 Aligned_cols=45 Identities=13% Similarity=0.056 Sum_probs=30.6
Q ss_pred CCcEEEccCCCCcEEeehhHHHHHHhCCcccCcccceecCCCC----CCCCeeEEEee
Q 013170 310 KNKVRMVKSSPESFIIQVGESADILSKGKLRSTLHCVCRPTKL----ENLSRETFVVF 363 (448)
Q Consensus 310 ~G~Wi~V~p~p~a~VVNIGD~lqi~SNG~~kSt~HRVv~p~~~----~~~~R~Sia~F 363 (448)
++.++.+...+++++|.-|++ + + -.|.|..-... ....|+|+.|-
T Consensus 152 ~~~~~~i~L~~GsllvM~G~~-r------~--~~H~I~~~~~~~~p~~~~~RIsLTFR 200 (211)
T 3i3q_A 152 NDPLKRLLLEHGDVVVWGGES-R------L--FYHGIQPLKAGFHPLTIDCRYNLTFR 200 (211)
T ss_dssp TSCCEEEEECTTCEEEECGGG-T------T--CCEEECCCCCCCBTTTBTCEEEEEEE
T ss_pred CCceEEEECCCCCEEEECchH-H------c--eEeccCcccCCcCCCCCCCEEEEEee
Confidence 356889999999999998876 2 1 24887552211 12369999874
No 14
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=23.54 E-value=31 Score=35.78 Aligned_cols=53 Identities=17% Similarity=0.109 Sum_probs=33.5
Q ss_pred CcceeEeCccccccccCCCCCCchhhHHHHHHHHHHHHHhhCCCCcEEEEEec-CCCcHHHHHHHHHHHHHHhcC
Q 013170 7 LELYELPYSDLKLLCLDNTCSSSTEEIKRFETVRTSVMENLGPGGPGLLSITS-VPNASIHRRNLLPLARKLALL 80 (448)
Q Consensus 7 ~~~~~id~sdl~~~~~~~~~~~~~~~~~~~~~~~~~I~~A~~~~G~G~l~~~g-vp~~~el~~~l~~~a~~FF~L 80 (448)
--||+|+|+|+. ++. ++ .+.. +.+. --|.++|+| || .+...+..+.+.+|...
T Consensus 99 ~~iP~i~f~di~----~~~--~s-------~~~~----~~ir--~rG~vVIRgvvp--~e~A~~~~~~~~~yl~~ 152 (461)
T 2dbn_A 99 AVWPVLSYADIK----AGH--VT-------AEQR----EQIK--RRGCAVIKGHFP--REQALGWDQSMLDYLDR 152 (461)
T ss_dssp CSSCEEEHHHHH----HTC--CC-------HHHH----HHHH--HHSEEEEETSSC--HHHHHHHHHHHHHHHHH
T ss_pred CCcceecHHHhc----CCC--CC-------HHHH----HHHH--hccEEEECCCCC--HHHHHHHHHHHHHHHHh
Confidence 468999999998 322 11 1222 3333 246788898 56 67777777777777644
Done!