BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013171
(448 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8N1E6|FXL14_HUMAN F-box/LRR-repeat protein 14 OS=Homo sapiens GN=FBXL14 PE=1 SV=1
Length = 418
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 175/348 (50%), Gaps = 36/348 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTA-------ACLDSLSALG--SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A + +A G L L L CQ L+D + S+ + L++LNL F
Sbjct: 180 RHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCG 239
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRH 319
I+D L+HL + +L SLNL SC I D G+++L G L L++S +VG L +
Sbjct: 240 GISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAY 299
Query: 320 LS-GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L+S++L ISD + R + + L++LN+ +ITD GL + L+ LT
Sbjct: 300 IAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLT 359
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 422
+DL+G RIT G + L+ L + +TD+ + D S L
Sbjct: 360 GIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPL 407
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 156/290 (53%), Gaps = 46/290 (15%)
Query: 176 LSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
+ G+ N++SL +S C +TD+G+ + + +GSL LN
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGH----------------------AFVQEIGSLRALN 123
Query: 235 LNRC-QLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHLK-GLTNLESLNLDSC-GIG 289
L+ C Q++D + ++ + L+VL LG + IT+ L+ + GL L+SLNL SC +
Sbjct: 124 LSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLS 183
Query: 290 DEGLVNLTGLCN--------LKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFTG-ISD 338
D G+ +L G+ L+ L L D Q + L+H+S GLT L +NLSF G ISD
Sbjct: 184 DVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISD 243
Query: 339 GSLRKLAGLSSLKSLNLDA-RQITDTGLA--ALTSLTGLTHLDL-FGARITDSGAAYL-R 393
L L+ + SL+SLNL + I+DTG+ A+ SL L+ LD+ F ++ D AY+ +
Sbjct: 244 AGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLR-LSGLDVSFCDKVGDQSLAYIAQ 302
Query: 394 NFKNLRSLEICGGGLTDAGV-KHIKDLSSLTLLNLSQNCNLTDKTLELIS 442
L+SL +C ++D G+ + ++ + L LN+ Q +TDK LELI+
Sbjct: 303 GLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIA 352
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 382 CLKVLNLGLWQMTDS 396
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>sp|Q8BID8|FXL14_MOUSE F-box/LRR-repeat protein 14 OS=Mus musculus GN=Fbxl14 PE=2 SV=1
Length = 400
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 156/290 (53%), Gaps = 46/290 (15%)
Query: 176 LSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
+ G+ N++SL +S C +TD+G+ + + +GSL LN
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGH----------------------AFVQEIGSLRALN 123
Query: 235 LNRC-QLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHLK-GLTNLESLNLDSC-GIG 289
L+ C Q++D + ++ + L+VL LG + IT+ L+ + GL L+SLNL SC +
Sbjct: 124 LSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLS 183
Query: 290 DEGLVNLTGLCN--------LKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFTG-ISD 338
D G+ +L G+ L+ L L D Q + L+H+S GLT L +NLSF G ISD
Sbjct: 184 DVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISD 243
Query: 339 GSLRKLAGLSSLKSLNLDA-RQITDTGLA--ALTSLTGLTHLDL-FGARITDSGAAYL-R 393
L L+ + SL+SLNL + I+DTG+ A+ SL L+ LD+ F ++ D AY+ +
Sbjct: 244 AGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLR-LSGLDVSFCDKVGDQSLAYIAQ 302
Query: 394 NFKNLRSLEICGGGLTDAGV-KHIKDLSSLTLLNLSQNCNLTDKTLELIS 442
L+SL +C ++D G+ + ++ + L LN+ Q +TDK LELI+
Sbjct: 303 GLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIA 352
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 382 CLKVLNLGLWQMTDS 396
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 171/337 (50%), Gaps = 36/337 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTA-------ACLDSLSALG--SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A + +A G L L L CQ L+D + S+ + L++LNL F
Sbjct: 180 RHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCG 239
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRH 319
I+D L+HL + +L SLNL SC I D G+++L G L L++S +VG L +
Sbjct: 240 GISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAY 299
Query: 320 LS-GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L+S++L ISD + R + + L++LN+ +ITD GL + L+ LT
Sbjct: 300 IAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLT 359
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
+DL+G RIT G + L+ L + +TD+
Sbjct: 360 GIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDS 396
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>sp|Q17R01|FXL14_BOVIN F-box/LRR-repeat protein 14 OS=Bos taurus GN=FBXL14 PE=2 SV=1
Length = 400
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 156/290 (53%), Gaps = 46/290 (15%)
Query: 176 LSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
+ G+ N++SL +S C +TD+G+ + + +GSL LN
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGH----------------------AFVQEIGSLRALN 123
Query: 235 LNRC-QLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHLK-GLTNLESLNLDSC-GIG 289
L+ C Q++D + ++ + L+VL LG + IT+ L+ + GL L+SLNL SC +
Sbjct: 124 LSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLS 183
Query: 290 DEGLVNLTGLCN--------LKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFTG-ISD 338
D G+ +L G+ L+ L L D Q + L+H+S GLT L +NLSF G ISD
Sbjct: 184 DVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISD 243
Query: 339 GSLRKLAGLSSLKSLNLDA-RQITDTGLA--ALTSLTGLTHLDL-FGARITDSGAAYL-R 393
L L+ + SL+SLNL + I+DTG+ A+ SL L+ LD+ F ++ D AY+ +
Sbjct: 244 AGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLR-LSGLDVSFCDKVGDQSLAYIAQ 302
Query: 394 NFKNLRSLEICGGGLTDAGV-KHIKDLSSLTLLNLSQNCNLTDKTLELIS 442
L+SL +C ++D G+ + ++ + L LN+ Q +TDK LELI+
Sbjct: 303 GLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIA 352
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 382 CLKVLNLGLWQMTDS 396
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 171/337 (50%), Gaps = 36/337 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTA-------ACLDSLSALG--SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A + +A G L L L CQ L+D + S+ + L++LNL F
Sbjct: 180 RHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCG 239
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSD-TQVGSSGLRH 319
I+D L+HL + +L SLNL SC I D G+++L G L L++S +VG L +
Sbjct: 240 GISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAY 299
Query: 320 LS-GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L+S++L ISD + R + + L++LN+ +ITD GL + L+ LT
Sbjct: 300 IAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLT 359
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
+DL+G RIT G + L+ L + +TD+
Sbjct: 360 GIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDS 396
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>sp|Q723K6|INLA_LISMF Internalin-A OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlA PE=3 SV=1
Length = 800
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 183/393 (46%), Gaps = 60/393 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAGVKHIKDLS 420
N KN+ I ++D G D++
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGGSYAEPDIT 459
>sp|G2K3G6|INLA_LISM4 Internalin-A OS=Listeria monocytogenes serotype 1/2a (strain
10403S) GN=inlA PE=3 SV=1
Length = 800
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 184/393 (46%), Gaps = 60/393 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAGVKHIKDLS 420
N KN+ I ++D G D++
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGGSYAEPDIT 459
>sp|P0DJM0|INLA_LISMO Internalin-A OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlA PE=1 SV=1
Length = 800
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 184/393 (46%), Gaps = 60/393 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAGVKHIKDLS 420
N KN+ I ++D G D++
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGGSYTEPDIT 459
>sp|Q8NEE6|FXL13_HUMAN F-box/LRR-repeat protein 13 OS=Homo sapiens GN=FBXL13 PE=2 SV=3
Length = 735
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 197/449 (43%), Gaps = 86/449 (19%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHL-KDCSNLQSLDFNFC 91
LQ+L + P D+ M I+ +L ++LS + +T+ + L + NLQ+L +C
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 92 IQISDGGLEHLR---GLSNLTSLSFRRNNAITAQGMKAFA----GLINL----------- 133
+ +D GL++L G L L I+ QG + A G+++L
Sbjct: 307 RRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLTDN 366
Query: 134 -VKLDLERCTRI---------HGGLVNLKGLM--KLESLNIKWCNCITDSDMKPL-SGLT 180
VK +E+C+RI H + L KL + + +TD+ K +
Sbjct: 367 CVKALVEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASFKFIDKNYP 426
Query: 181 NLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ 239
NL + ++ C +TDS + L L++LT+LNL C
Sbjct: 427 NLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANC------------------------- 461
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTG 298
+++ ++G + D + LNL +C + D ++ L+
Sbjct: 462 --------------VRIGDMGLKQFLDG-----PASMRIRELNLSNCVRLSDASVMKLSE 502
Query: 299 LC-NLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL- 355
C NL L L + + + + G+ ++ + +L SI+LS T IS+ L L+ LK L++
Sbjct: 503 RCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVS 562
Query: 356 DARQITDTGLAAL-TSLTGLTHLDL-FGARITDSGAAYLRNF-KNLRSLEICG-GGLTDA 411
+ +ITD G+ A S L HLD+ + ++++D L + NL SL I G +TD+
Sbjct: 563 ECYRITDDGIQAFCKSSLILEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKITDS 622
Query: 412 GVKHIK-DLSSLTLLNLSQNCNLTDKTLE 439
++ + L +L++S LTD+ LE
Sbjct: 623 AMEMLSAKCHYLHILDISGCVLLTDQILE 651
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 10/188 (5%)
Query: 83 LQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC 141
++ L+ + C+++SD + L NL LS R +TAQG+ + +LV +DL
Sbjct: 481 IRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGT 540
Query: 142 TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL--SGLTNLKSLQIS-CSKVTDSGIA 198
+ GL L KL+ L++ C ITD ++ S L L+ L +S CS+++D I
Sbjct: 541 DISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLI-LEHLDVSYCSQLSDMIIK 599
Query: 199 YLKGL-QKLTLLNLEGCP-VTAACLDSLSA-LGSLFYLNLNRCQLSDDGCEKFSKIG--S 253
L LT L++ GCP +T + ++ LSA L L+++ C L D + +IG
Sbjct: 600 ALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCKQ 659
Query: 254 LKVLNLGF 261
L++L + +
Sbjct: 660 LRILKMQY 667
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 21/240 (8%)
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL--NLGFNEITD 266
LN GC + S+S +L LN++ C D + G VL NL IT+
Sbjct: 226 LNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITN 285
Query: 267 ECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLT---GLCNLKCLELSD-TQVGSSGLRHL 320
+ L + NL++L+L C D+GL L G L L+LS TQ+ G R++
Sbjct: 286 RTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYI 345
Query: 321 S----GLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALTSLTGL 374
+ G+ +L +IN ++D ++ L S + SL A I+D AL++ L
Sbjct: 346 ANSCTGIMHL-TIN-DMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKL 402
Query: 375 THLDLFG-ARITDSGAAYL-RNFKNLRSLEICG-GGLTDAGVKHIKDLSSLTLLNLSQNC 431
+ G R+TD+ ++ +N+ NL + + G+TD+ ++ + L LT+LNL+ NC
Sbjct: 403 RKIRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLA-NC 461
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
SL+S+DLSG+D+++ GL L L+ L + C +I+D G++ +F +++
Sbjct: 531 SLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQ-----------AFCKSS 579
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGL--MKLESLNIKWCNCITDSDMKP 175
I L LD+ C+++ ++ + + L SL+I C ITDS M+
Sbjct: 580 LI-------------LEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKITDSAMEM 626
Query: 176 LSGLTN-LKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LS + L L IS C +TD + L+ G ++L +L ++ C
Sbjct: 627 LSAKCHYLHILDISGCVLLTDQILEDLQIGCKQLRILKMQYC 668
>sp|Q723X5|INLI_LISMF Internalin-I OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlI PE=3 SV=1
Length = 1775
Score = 68.9 bits (167), Expect = 8e-11, Method: Composition-based stats.
Identities = 95/336 (28%), Positives = 154/336 (45%), Gaps = 48/336 (14%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
+E L+ L NLTSL+ NN + L+NLV L+L + LVNL G
Sbjct: 172 IEGLQYLENLTSLNLSENN---ISDLAPIKDLVNLVSLNLSS----NRTLVNLSG----- 219
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
+ GL NL+ L +S +K + I+ + L L ++ +GC +
Sbjct: 220 -----------------VEGLVNLQELNVSANKALED-ISQVAALPVLKEISAQGCNIKT 261
Query: 219 ACLDSLSA--LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
LD+ + L L L L+D +K+ LK L + N + + L LKG T
Sbjct: 262 LELDNPAGAILPELETFYLQENDLTD--LTSLAKLPKLKNLYIKGNA-SLKSLATLKGAT 318
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES-INLSFTG 335
L+ ++ +C E L +++GL L+ ++LS G S L+ ++ L +L + +N++
Sbjct: 319 KLQLIDASNC-TDLETLGDISGLSELEMIQLS----GCSKLKEITSLKDLPNLVNITADS 373
Query: 336 ISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
+ L L L L++L L D + +T+ + A+T + L L L G IT G L N
Sbjct: 374 CAIEDLGTLNNLPKLQTLILSDNKDLTN--INAITDMPQLKTLALDGCGITSIGT--LDN 429
Query: 395 FKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQN 430
L L++ LT + I DL L+ L++S N
Sbjct: 430 LPKLEKLDLKENQLTS--ISEINDLPRLSYLDVSVN 463
Score = 47.8 bits (112), Expect = 2e-04, Method: Composition-based stats.
Identities = 99/390 (25%), Positives = 171/390 (43%), Gaps = 45/390 (11%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
S L + LSG + LKD NL ++ + C I D G L L L +L N
Sbjct: 341 SELEMIQLSGCSKLKE-ITSLKDLPNLVNITADSC-AIEDLGT--LNNLPKLQTLILSDN 396
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+T + A + L L L+ C G L L KLE L++K + S+ +
Sbjct: 397 KDLT--NINAITDMPQLKTLALDGCGITSIG--TLDNLPKLEKLDLKENQLTSISE---I 449
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ L L L +S + +T I LK L L LN+ ++ + +L+ SL Y+N++
Sbjct: 450 NDLPRLSYLDVSVNYLTT--IGELKKLPLLEWLNVSSNRLSD--VSTLTNFPSLNYINVS 505
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
+ G K +++ SLK N ++D ++H + NL ++ + I + G
Sbjct: 506 NNVIRTVG--KMTELPSLKEFYAQNNNVSDISMIH--DMPNLRKVDASNNLITNIG--TF 559
Query: 297 TGLCNLKCLELSDTQVGSSGLRH-LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
L L+ L++ ++ ++ + H L L + N T I + L L ++L
Sbjct: 560 DNLPKLQNLDVHSNRITNTSVIHDLPSLETFYAQNNLITNIG-----TMDNLPELTYVDL 614
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF------KNLRSLEICGGGL- 408
+I +L + L L++ ++TD+ +YLR+ LR+LE+ L
Sbjct: 615 SFNRI-----PSLAPIGDLPKLEIL--KVTDN-YSYLRSLGTMDGVSKLRNLELQNNYLN 666
Query: 409 ---TDAGVKHIKDLSSLTLLNLSQNCNLTD 435
T+ + + DL++LT LNL N ++D
Sbjct: 667 YTGTEGNLSALSDLTNLTELNLRDNGYISD 696
Score = 40.8 bits (94), Expect = 0.023, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 37/238 (15%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR------------ 114
++V+D +IH D NL+ +D + + + G ++L L NL S R
Sbjct: 529 NNVSDISMIH--DMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPS 586
Query: 115 ------RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCI 168
+NN IT G + V L R L + L KLE L + N
Sbjct: 587 LETFYAQNNLITNIGTMDNLPELTYVDLSFNRIP----SLAPIGDLPKLEILKVT-DNYS 641
Query: 169 TDSDMKPLSGLTNLKSLQISCSKV----TDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
+ + G++ L++L++ + + T+ ++ L L LT LNL + + L
Sbjct: 642 YLRSLGTMDGVSKLRNLELQNNYLNYTGTEGNLSALSDLTNLTELNLRDNGYISD-ISGL 700
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
S L L YLNL+ ++ D S + +L+ L L N+I D + L++L++LN
Sbjct: 701 STLSRLIYLNLDSNKIKD--ISALSNLTTLQELTLENNQIED-----ISALSDLDNLN 751
>sp|Q9C5D2|FBL4_ARATH F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2
SV=1
Length = 610
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 215/455 (47%), Gaps = 50/455 (10%)
Query: 13 ELVYSRCLTEVSLEAFRD--CALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVT 70
E V S LT+ L A + +++L L P V+ + +A + +SL S+DL G V
Sbjct: 120 ENVESSSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVG 179
Query: 71 DSGLIHL-KDCSNLQSLDFNFCIQISD-GGLEHLRGLS-NLTSLSFRRNNAITAQGMKAF 127
D GL + K C L+ L+ FC ++D G ++ + G S +L S+ + IT ++A
Sbjct: 180 DQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAV 239
Query: 128 AG---LINLVKLDLERCTRIH-GGLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGL-TN 181
L+ ++ LD E IH GL+ + +G +L++L ++ C +TD + L T+
Sbjct: 240 GSHCKLLEVLYLDSE---YIHDKGLIAVAQGCHRLKNLKLQ-CVSVTDVAFAAVGELCTS 295
Query: 182 LKSLQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLS-ALGSLFYLNLNR 237
L+ L + S TD G+ + KG +KL L L C V+ L++++ L + +N
Sbjct: 296 LERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEING 355
Query: 238 CQ-LSDDGCEKFSK-IGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSC-GIGD-- 290
C + G E K LK L L + I + L + KG +LE L+L C GIGD
Sbjct: 356 CHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIA 415
Query: 291 -----EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT-GISDGSLRKL 344
+G NL L +C E+ + + S G +H LT L +L F + + +L +
Sbjct: 416 MCSIAKGCRNLKKLHIRRCYEIGNKGIISIG-KHCKSLTEL---SLRFCDKVGNKALIAI 471
Query: 345 AGLSSLKSLNLDA-RQITDTGLAALTS-LTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
SL+ LN+ QI+D G+ A+ LTHLD+ + L+N ++ E
Sbjct: 472 GKGCSLQQLNVSGCNQISDAGITAIARGCPQLTHLDI----------SVLQNIGDMPLAE 521
Query: 403 ICGGG--LTDAGVKHIKDLSSLTLLNLSQNCNLTD 435
+ G L D + H ++ L +L Q C L +
Sbjct: 522 LGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKLLE 556
Score = 39.3 bits (90), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 31/200 (15%)
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
E S I V ++G + +C T+L+SL+L C +GD+GL + C
Sbjct: 143 ENLSLIWCPNVSSVGLCSLAQKC-------TSLKSLDLQGCYVGDQGLAAVGKFCK---- 191
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR-QITDTG 364
Q+ LR GLT++ I+L G S SLKS+ + A +ITD
Sbjct: 192 -----QLEELNLRFCEGLTDVGVIDL-VVGCS----------KSLKSIGVAASAKITDLS 235
Query: 365 LAALTSLTGLTH-LDLFGARITDSG-AAYLRNFKNLRSLEICGGGLTDAGVKHIKDL-SS 421
L A+ S L L L I D G A + L++L++ +TD + +L +S
Sbjct: 236 LEAVGSHCKLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTS 295
Query: 422 LTLLNLSQNCNLTDKTLELI 441
L L L + TDK + I
Sbjct: 296 LERLALYSFQHFTDKGMRAI 315
>sp|Q8YA32|INLI_LISMO Internalin-I OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlI PE=4 SV=1
Length = 1778
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 95/359 (26%), Positives = 159/359 (44%), Gaps = 50/359 (13%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
+E L+ L NLTSL+ NN + L+NLV L+L + LVNL G+ L
Sbjct: 175 IEGLQYLENLTSLNLSENN---ISDLAPLKDLVNLVSLNLSS----NRTLVNLSGVEDL- 226
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
+N++ N + ++ +S + +L L+ ++ + LK L LE +
Sbjct: 227 -VNLQELNVSANKALEDISQVASLPVLKEISAQGCNIKTLELKNPAGAVLPELETFYLQE 285
Query: 219 ACLDSLSALGSL-----FYLNLN-------------RCQLSD-DGCEKFSKIGSLKVLN- 258
L +L++L L Y+ N + QL D C +G + L+
Sbjct: 286 NDLTNLTSLAKLPKLKNLYIKGNASLKSLETLNGATKLQLIDASNCTDLETLGDISGLSE 345
Query: 259 ------LGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV 312
G +++ + + LK L NL ++ DSC I D G +N L L+ L LSD +
Sbjct: 346 LEMIQLSGCSKLKE--ITSLKNLPNLVNITADSCAIEDLGTLN--NLPKLQTLVLSDNE- 400
Query: 313 GSSGLRHLSGLTNLESI-NLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 371
L +++ +T+L + L+ G S+ L L L+ L+L QIT ++ +T L
Sbjct: 401 ---NLTNITAITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLDLKENQITS--ISEITDL 455
Query: 372 TGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQN 430
L++LD+ +T G L+ L L + L+D V + + SL +N+S N
Sbjct: 456 PRLSYLDVSVNNLTTIGD--LKKLPLLEWLNVSSNRLSD--VSTLTNFPSLNYINISNN 510
Score = 52.8 bits (125), Expect = 5e-06, Method: Composition-based stats.
Identities = 100/377 (26%), Positives = 166/377 (44%), Gaps = 42/377 (11%)
Query: 72 SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNL---TSLSFRRNNAITAQGMKAFA 128
SG LK+ ++L++L I +E L L+NL +L N +T + A
Sbjct: 352 SGCSKLKEITSLKNLPNLVNITADSCAIEDLGTLNNLPKLQTLVLSDNENLT--NITAIT 409
Query: 129 GLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
L L L L+ C G L L KLE L++K N IT + ++ L L L +S
Sbjct: 410 DLPQLKTLTLDGCGITSIG--TLDNLPKLEKLDLKE-NQITS--ISEITDLPRLSYLDVS 464
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
+ +T I LK L L LN+ ++ + +L+ SL Y+N++ + G K
Sbjct: 465 VNNLTT--IGDLKKLPLLEWLNVSSNRLSD--VSTLTNFPSLNYINISNNVIRTVG--KM 518
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
+++ SLK N I+D ++H + NL ++ + I + G L L+ L++
Sbjct: 519 TELPSLKEFYAQNNSISDISMIH--DMPNLRKVDASNNLITNIG--TFDNLPKLQSLDVH 574
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
++ S+ + H L +LE+ N I++ + + L L +NL +I LA +
Sbjct: 575 SNRITSTSVIH--DLPSLETFNAQTNLITN--IGTMDNLPDLTYVNLSFNRIPS--LAPI 628
Query: 369 TSLTGLTHLDLFGARITDSGAAYLRNF------KNLRSLEICGGGL----TDAGVKHIKD 418
L L L I +YLR+ LR L++ L T+ + + D
Sbjct: 629 GDLPNLETL------IVSDNNSYLRSLGTMDGVPKLRILDLQNNYLNYTGTEGNLSSLSD 682
Query: 419 LSSLTLLNLSQNCNLTD 435
L++LT LNL N + D
Sbjct: 683 LTNLTELNLRNNVYIDD 699
Score = 35.4 bits (80), Expect = 0.81, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 43/227 (18%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L S+D+ + +T + +IH D +L++ + + + G +++L L+ +LSF R +
Sbjct: 568 LQSLDVHSNRITSTSVIH--DLPSLETFNAQTNLITNIGTMDNLPDLT-YVNLSFNRIPS 624
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK--WCNCI-TDSDMKP 175
+ G L NL L + L + G+ KL L+++ + N T+ ++
Sbjct: 625 LAPIG-----DLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYLNYTGTEGNLSS 679
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
LS LTNL L + + D + LS L L YLNL
Sbjct: 680 LSDLTNLTELNLRNNVYIDD-------------------------ISGLSTLSRLIYLNL 714
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
+ ++ D S + +L+ L L N+I + + L++LE+LN
Sbjct: 715 DSNKIED--ISALSNLTNLQELTLENNKIEN-----ISALSDLENLN 754
>sp|A6H779|FBXL2_BOVIN F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1
Length = 423
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 124/249 (49%), Gaps = 21/249 (8%)
Query: 57 SSLLSVDLSGS-DVTDSGLIHLKD-CSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSF 113
S L +DL+ +T+S L + + C +L+ L+ ++C QI+ G+E L RG L +L
Sbjct: 130 SKLKHLDLTSCVSITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLL 189
Query: 114 RRNNAITAQGMKAFAGLIN-LVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITD 170
R + + +K + LV L+L+ C+R+ G+V L +G +L++L + C +TD
Sbjct: 190 RGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTD 249
Query: 171 SDMKPLSGLTNLKSLQI----SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSL 224
+ + L+ N LQI CS +TD+G L + L ++LE C +T L L
Sbjct: 250 ASLTALA--LNCPRLQILEAARCSHLTDAGFTLLARNCHDLEKMDLEECILITDRTLTQL 307
Query: 225 S-ALGSLFYLNLNRCQL-SDDGCEKFSKIG----SLKVLNL-GFNEITDECLVHLKGLTN 277
S L L+L+ C+L +DDG S L+VL L ITD L HL+
Sbjct: 308 SIHCPKLQALSLSHCELITDDGILHLSNSPCGHERLRVLELDNCLLITDVALEHLEHCRG 367
Query: 278 LESLNLDSC 286
LE L L C
Sbjct: 368 LERLELYDC 376
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 142/354 (40%), Gaps = 86/354 (24%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C +I+D L R S L L +IT +K +
Sbjct: 101 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGIS-------- 152
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LN+ WC+ IT ++ L G L++L +
Sbjct: 153 ---------------EGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLLRGCTQLED 197
Query: 188 -------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSA 226
SCS+VTD G+ L +G +L L L GC +T A SL+A
Sbjct: 198 EALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTDA---SLTA 254
Query: 227 LGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
L LN R Q+ + C + + GF + C +LE ++L+
Sbjct: 255 LA----LNCPRLQILEAARCSHLT--------DAGFTLLARNC-------HDLEKMDLEE 295
Query: 286 CG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS----GLTNLESINL-SFTGIS 337
C I D L L+ C L+ L LS + + G+ HLS G L + L + I+
Sbjct: 296 CILITDRTLTQLSIHCPKLQALSLSHCELITDDGILHLSNSPCGHERLRVLELDNCLLIT 355
Query: 338 DGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
D +L L L+ L L D +Q+T G+ + + + + A +T AA
Sbjct: 356 DVALEHLEHCRGLERLELYDCQQVTRAGIKRMRAQLPHVRVHAYFAPVTPPTAA 409
Score = 36.6 bits (83), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSD-VTDSGLIHLKDCS----NLQSLDFNFCIQISDGG 98
+ D+ + ++ L ++ LS + +TD G++HL + L+ L+ + C+ I+D
Sbjct: 299 ITDRTLTQLSIHCPKLQALSLSHCELITDDGILHLSNSPCGHERLRVLELDNCLLITDVA 358
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
LEHL L L +T G+K + V++
Sbjct: 359 LEHLEHCRGLERLELYDCQQVTRAGIKRMRAQLPHVRV 396
>sp|P23799|ESAG8_TRYBB Putative adenylate cyclase regulatory protein OS=Trypanosoma brucei
brucei GN=ESAG8 PE=2 SV=1
Length = 630
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 184/407 (45%), Gaps = 57/407 (14%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
L S+ L ++VTD L + L+ LD + C +I+D L + G+ +L LS
Sbjct: 230 PQLTSLSLCQTNVTDKDLRCIHPDGKLKMLDISSCHEITD--LTAIGGVRSLEKLSLSGC 287
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+T +G++ NL +LD+ C + G V LK L+ L+ L++ NC D+ L
Sbjct: 288 WNVT-KGLEELCKFSNLRELDISGCL-VLGSAVVLKNLINLKVLSVS--NCKNFKDLNGL 343
Query: 177 SGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L NL+ L +S C V S + ++ L L L++ GC + C D L L +L L L
Sbjct: 344 ERLVNLEKLNLSGCHGV--SSLGFVANLSNLKELDISGCE-SLVCFDGLQDLNNLEVLYL 400
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNL-------GFNEITDECLVHLKGLTNLESLNLDSCGI 288
+ F+ +G++K L+ G IT L L+ L LE L+L+ CG
Sbjct: 401 RDVK-------SFTNVGAIKNLSKMRELDLSGCERITS--LSGLETLKGLEELSLEGCG- 450
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG---LTNLESINL-------SFTGISD 338
+ L +L+ L +S+ L LSG LT LE + L +F I +
Sbjct: 451 EIMSFDPIWSLYHLRVLYVSEC----GNLEDLSGLQCLTGLEEMYLHGCRKCTNFGPIWN 506
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKN 397
LR + L NLD L+ L LTGL L L G IT G + N +N
Sbjct: 507 --LRNVCVLELSCCENLD-------DLSGLQCLTGLEELYLIGCEEITTIGV--VGNLRN 555
Query: 398 LRSLEICG-GGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKT-LELIS 442
L+ L C L + G ++ L +L L+LS C L+ +EL+S
Sbjct: 556 LKCLSTCWCANLKELG--GLERLVNLEKLDLSGCCGLSSSVFMELMS 600
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 182/384 (47%), Gaps = 41/384 (10%)
Query: 66 GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN--NAITAQG 123
GS++ D L L+D L+ LD + C + L + L NL L +R N +
Sbjct: 121 GSELQD--LTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTMVNDMWCSS 178
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN-IKWCNCITDSD-MKPLSGLTN 181
+ L++L ++D R G+ ++ GL +L++L + NCI + + L
Sbjct: 179 IGLLKFLVHL-EVDGSR------GVTDITGLFRLKTLEALSLDNCINITKGFDKICALPQ 231
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L SL + + VTD + + KL +L++ C L ++ + SL L+L+ C
Sbjct: 232 LTSLSLCQTNVTDKDLRCIHPDGKLKMLDISSCHEITD-LTAIGGVRSLEKLSLSGCWNV 290
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
G E+ K +L+ L++ + +V LK L NL+ L++ +C + L L L N
Sbjct: 291 TKGLEELCKFSNLRELDISGCLVLGSAVV-LKNLINLKVLSVSNCK-NFKDLNGLERLVN 348
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLS-------FTGISDGSLRKLAGLSSLKSLN 354
L+ L LS G S L ++ L+NL+ +++S F G+ D L++L+ L
Sbjct: 349 LEKLNLSGCH-GVSSLGFVANLSNLKELDISGCESLVCFDGLQD--------LNNLEVLY 399
Query: 355 L-DARQITDTGLAALTSLTGLTHLDLFGA-RITD-SGAAYLRNFKNLRSLEICGGGLTDA 411
L D + T+ G A+ +L+ + LDL G RIT SG L+ + L SLE CG ++
Sbjct: 400 LRDVKSFTNVG--AIKNLSKMRELDLSGCERITSLSGLETLKGLEEL-SLEGCGEIMS-- 454
Query: 412 GVKHIKDLSSLTLLNLSQNCNLTD 435
I L L +L +S+ NL D
Sbjct: 455 -FDPIWSLYHLRVLYVSECGNLED 477
>sp|Q8BH16|FBXL2_MOUSE F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=1 SV=1
Length = 423
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 128/249 (51%), Gaps = 21/249 (8%)
Query: 57 SSLLSVDLSGS-DVTDSGLIHLKD-CSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSF 113
S L +DL+ VT+S L + + C NL+ L+ ++C QI+ G+E L RG L +L
Sbjct: 130 SKLKHLDLTSCVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLL 189
Query: 114 RRNNAITAQGMKAFAGLIN-LVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITD 170
R + + +K + LV L+L+ C+RI G+V + +G +L++L + C+ +TD
Sbjct: 190 RGCTQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTD 249
Query: 171 SDMKPLSGLTNLKSLQI----SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSL 224
+ + L GL N LQ+ CS +TD+G L + +L ++LE C +T + L L
Sbjct: 250 ASLTAL-GL-NCPRLQVLEAARCSHLTDAGFTLLARNCHELEKMDLEECVLITDSTLVQL 307
Query: 225 S-ALGSLFYLNLNRCQL-SDDGCEKFSKIG----SLKVLNL-GFNEITDECLVHLKGLTN 277
S L L+L+ C+L +D+G S L+VL L +TD L HL+
Sbjct: 308 SIHCPKLQALSLSHCELITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRG 367
Query: 278 LESLNLDSC 286
LE L L C
Sbjct: 368 LERLELYDC 376
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 142/354 (40%), Gaps = 86/354 (24%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C +I+D L R S L L ++T +K +
Sbjct: 101 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSVTNSSLKGIS-------- 152
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LN+ WC+ IT ++ L G LK+L +
Sbjct: 153 ---------------EGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLED 197
Query: 188 -------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSA 226
SCS++TD G+ + +G +L L L GC +T A SL+A
Sbjct: 198 EALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTDA---SLTA 254
Query: 227 LGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
LG LN R Q+ + C + + GF + C LE ++L+
Sbjct: 255 LG----LNCPRLQVLEAARCSHLT--------DAGFTLLARNC-------HELEKMDLEE 295
Query: 286 CG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS----GLTNLESINL-SFTGIS 337
C I D LV L+ C L+ L LS + + G+ HLS G L + L + ++
Sbjct: 296 CVLITDSTLVQLSIHCPKLQALSLSHCELITDEGILHLSSSTCGHERLRVLELDNCLLVT 355
Query: 338 DGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
D SL L L+ L L D +Q+T G+ + + + + A +T A
Sbjct: 356 DASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPPAV 409
Score = 35.8 bits (81), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 69 VTDSGLIHLKDCS----NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G++HL + L+ L+ + C+ ++D LEHL L L +T G+
Sbjct: 325 ITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGI 384
Query: 125 KAFAGLINLVKL 136
K + VK+
Sbjct: 385 KRMRAQLPHVKV 396
>sp|P35859|ALS_RAT Insulin-like growth factor-binding protein complex acid labile
subunit OS=Rattus norvegicus GN=Igfals PE=1 SV=1
Length = 603
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 133/331 (40%), Gaps = 6/331 (1%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLES 159
+GLS+L L+ N+ + F GL NL +L L + T + L GL +L
Sbjct: 166 FQGLSHLWDLNLGWNSLVVLPD-TVFQGLGNLHELVLAGNKLTYLQPAL--FCGLGELRE 222
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
L++ N + L L+ L + + +T G++ L L+L V
Sbjct: 223 LDLS-RNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGL 281
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
D+ L L L L ++ F + L+ L LG N I +GL LE
Sbjct: 282 MEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLE 341
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
L L+ I + + +GL N+ + LS + S R GL L S++L + +
Sbjct: 342 VLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHV 401
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
L AGLS L+ L L I+ +L L+ L LDL R+T + +L
Sbjct: 402 RLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLE 461
Query: 400 SLEICGGGLTDAGVKHIKDLSSLTLLNLSQN 430
L + LT + + L L++S N
Sbjct: 462 YLLLSYNQLTTLSAEVLGPLQRAFWLDISHN 492
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 143/364 (39%), Gaps = 19/364 (5%)
Query: 72 SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLI 131
GL HL D + L +N + + D + GL NL L N +T F GL
Sbjct: 167 QGLSHLWDLN----LGWNSLVVLPDTVFQ---GLGNLHELVLA-GNKLTYLQPALFCGLG 218
Query: 132 NLVKLDLERCTRIHGGLVNLKG-----LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
L +LDL R L ++K L +L+ L + N IT G+ L+ L
Sbjct: 219 ELRELDLSR-----NALRSVKANVFVHLPRLQKLYLD-RNLITAVAPGAFLGMKALRWLD 272
Query: 187 ISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCE 246
+S ++V GL L +L L + + + L L L L ++ G
Sbjct: 273 LSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGER 332
Query: 247 KFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
F +G L+VL L N+IT+ + GL N+ +NL + GL L L
Sbjct: 333 TFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLH 392
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
L + +G L +GL+ L + L IS + LAGLS L L+L ++T
Sbjct: 393 LEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQ 452
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLN 426
L L +L L ++T A L + L+I L L + L+
Sbjct: 453 LFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRVRYLS 512
Query: 427 LSQN 430
L N
Sbjct: 513 LRNN 516
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QI++ + GL N+ ++ N + + + F GL L L LE H L
Sbjct: 349 QITEVRVGAFSGLFNVAVMNLS-GNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFA 407
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
GL L L ++ N I+ + + L+GL+ L L ++ +++T +GL L L L
Sbjct: 408 GLSGLRRLFLR-DNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLS 466
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI 264
+T + L L F+L+++ L FS +G ++ L+L N +
Sbjct: 467 YNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRVRYLSLRNNSL 518
Score = 40.4 bits (93), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 107/266 (40%), Gaps = 16/266 (6%)
Query: 183 KSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
++L + + ++ A + L L LNL+G + + +L L +L+YL+L R +L +
Sbjct: 77 RALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRN 136
Query: 243 DGCEKFSKIGSLKVLNLGFNEI--TDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT--- 297
F+ SL L+L N + +E L +GL++L LNL G LV L
Sbjct: 137 LAVGLFTHTPSLASLSLSSNLLGRLEEGL--FQGLSHLWDLNL-----GWNSLVVLPDTV 189
Query: 298 --GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
GL NL L L+ ++ GL L ++LS + L L+ L L
Sbjct: 190 FQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYL 249
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKH 415
D IT A + L LDL R+ L L + + +
Sbjct: 250 DRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRT 309
Query: 416 IKDLSSLTLLNLSQN--CNLTDKTLE 439
KDL L L L N L ++T E
Sbjct: 310 FKDLHFLEELQLGHNRIRQLGERTFE 335
>sp|Q91ZZ5|RXFP2_MOUSE Relaxin receptor 2 OS=Mus musculus GN=Rxfp2 PE=2 SV=2
Length = 737
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 32/277 (11%)
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC 165
SN+T LS ++N I +K F+ L K+ L+
Sbjct: 120 SNVTLLSLKKNK-IHRLPVKVFSRYTELRKIYLQH------------------------- 153
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
NCIT + GL NL+ L +S + +T K L +L L L+ P+T S
Sbjct: 154 NCITHISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQKSFM 213
Query: 226 ALGSLFYLNL--NRCQ-LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
L SLF+L++ NR + L + C + ++ + + N G IT+ + LT L L
Sbjct: 214 GLNSLFFLSMVGNRLEALPETLCAQMPQLNWVDLANNGIKYITNSTFLTCDSLTVL-FLP 272
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
+ G E + L NL L+LS + + S L L+ +NLS +
Sbjct: 273 RNQIGFVPEK--TFSSLKNLGELDLSSNMITKLPVHLFSDLHLLQKLNLSSNPLLYVHKN 330
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
+ L L+SL+L+ +I + + L+H+ L
Sbjct: 331 QFGSLKQLQSLDLERIEIPNISTGMFQPMKNLSHIYL 367
>sp|P26337|ESA8C_TRYEQ Putative adenylate cyclase regulatory protein OS=Trypanosoma
equiperdum GN=ESAG8C PE=2 SV=1
Length = 630
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 183/392 (46%), Gaps = 38/392 (9%)
Query: 66 GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN--NAITAQG 123
GS++ D L L+D L+ LD + C + L + L NL L +R N +
Sbjct: 121 GSELQD--LTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTMVNDMWCSS 178
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ L++L ++D R GL LK LE+L++ C IT + L L
Sbjct: 179 IGLLKFLVHL-EVDGSRGVTDITGLCRLK---TLEALSLDSCINITKG-FDKICALPQLT 233
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
SL + + VTD + + KL +L C L ++ + SL L+L+ C
Sbjct: 234 SLSLCQTNVTDKDLRCIHPDGKLKVLRYSSCHEITD-LTAIGGMRSLEKLSLSGCWNVTK 292
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
G E+ K +L+ L++ + +V LK L NL+ L++ +C + L L L NL
Sbjct: 293 GLEELCKFSNLRELDISGCLVLGSAVV-LKNLINLKVLSVSNCK-NFKDLNGLERLVNLD 350
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLS-------FTGISDGSLRKLAGLSSLKSLNL- 355
L LS G S L ++ L+NL+ +++S F G+ D L++L+ L L
Sbjct: 351 KLNLSGCH-GVSSLGFVANLSNLKELDISGCESLVCFDGLQD--------LNNLEVLYLR 401
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGA-RITD-SGAAYLRNFKNLRSLEICGGGLTDAGV 413
D + T+ G A+ +L+ + LDL G RIT SG L+ + L SLE CG ++
Sbjct: 402 DVKSFTNVG--AIKNLSKMRELDLSGCERITSLSGLETLKGLEEL-SLEGCGEIMS---F 455
Query: 414 KHIKDLSSLTLLNLSQNCNLTDKT-LELISGI 444
I L L +L +S+ NL D + LE I+G+
Sbjct: 456 DPIWSLHHLRVLYVSECGNLEDLSGLEGITGL 487
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 152/344 (44%), Gaps = 55/344 (15%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
SL + LSG GL L SNL+ LD + C+ + G L+ L NL LS +N
Sbjct: 278 SLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVL--GSAVVLKNLINLKVLSV--SN 333
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHG--GLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+ + L+NL KL+L C HG L + L L+ L+I C + D
Sbjct: 334 CKNFKDLNGLERLVNLDKLNLSGC---HGVSSLGFVANLSNLKELDISGCESLVCFD--G 388
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L L NL+ L + K + + + +K L K+ L+L GC + SLS L +L L
Sbjct: 389 LQDLNNLEVLYLRDVK-SFTNVGAIKNLSKMRELDLSGCER----ITSLSGLETLKGLE- 442
Query: 236 NRCQLSDDGCEK---FSKIGSLKVLNLGFNEITDEC-----LVHLKGLTNLESLNLDSC- 286
+LS +GC + F I SL L + + EC L L+G+T LE L L C
Sbjct: 443 ---ELSLEGCGEIMSFDPIWSLHHLRVLY---VSECGNLEDLSGLEGITGLEELYLHGCR 496
Query: 287 ---GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSGLTNLESI---NLSFTGIS 337
G + NL +C ++ C L D SGL+ L+GL L I ++ G+
Sbjct: 497 KCTNFGP--IWNLRNVCVVELSCCENLEDL----SGLQCLTGLEELYLIGCEEITPIGVV 550
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
G+LR L LS+ NL L L L L LDL G
Sbjct: 551 -GNLRNLKCLSTCWCANLKE-------LGGLDRLVNLEKLDLSG 586
>sp|Q149C3|LIGO4_MOUSE Leucine-rich repeat and immunoglobulin-like domain containing-NOGO
receptor-interacting protein 4 OS=Mus musculus GN=Lingo4
PE=2 SV=2
Length = 593
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 114/263 (43%), Gaps = 14/263 (5%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP---VTAACLDSLSALGSLFY 232
LS L L+ L +S ++++ GLQ L L L+G V L+AL +L
Sbjct: 80 LSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTAL-TLLD 138
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG---IG 289
L LN+ L DG FS++GSL+ L +G N + GL L ++ L+ C +
Sbjct: 139 LRLNQIVLFLDGA--FSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNLSTVP 196
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLS 348
L L L L+ EL ++ + LR L L LE + S + GSL L
Sbjct: 197 GLALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEALDPGSLVGL---- 252
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
+L SL + ++ AL L+ L LDL I+ A L L+ L + G L
Sbjct: 253 NLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGACL 312
Query: 409 TDAGVKHIKDLSSLTLLNLSQNC 431
T L++ LL+++ N
Sbjct: 313 TSIAAHAFHGLTAFHLLDVADNA 335
Score = 38.9 bits (89), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 95/255 (37%), Gaps = 33/255 (12%)
Query: 58 SLLSVDLSGSD--VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
SLL++ L G+ + G+ L L N + DG L L L
Sbjct: 109 SLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFLDGAFSELGSLQQLEV----G 164
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+N + AFAGL L + LERC L + GL
Sbjct: 165 DNHLVFVAPGAFAGLAKLSTITLERCN-----LSTVPGLA-------------------- 199
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG-SLFYLN 234
L+ L L +L++ + L+GL +L L + P A LD S +G +L L
Sbjct: 200 LAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEA-LDPGSLVGLNLSSLA 258
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
+ RC LS + + L++L+L N I+ L L L+ L L +
Sbjct: 259 ITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAH 318
Query: 295 NLTGLCNLKCLELSD 309
GL L+++D
Sbjct: 319 AFHGLTAFHLLDVAD 333
>sp|Q3EC97|FBL14_ARATH F-box/LRR-repeat protein 14 OS=Arabidopsis thaliana GN=FBL14 PE=2
SV=1
Length = 480
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 174/433 (40%), Gaps = 89/433 (20%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLK-DCSNLQSLDFNF 90
AL LC ++P ++ +++I S S L G V D GL+ L +C +L L +F
Sbjct: 68 ALLSLC-RRFPNLSK--VEIIYSGWMSKL-----GKQVDDQGLLVLTTNCHSLTDLTLSF 119
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRIHG--G 147
C I+D G+ HL L+SL IT G+ + A G L +L L RC +
Sbjct: 120 CTFITDVGIGHLSSCPELSSLKLNFAPRITGCGVLSLAVGCKKLRRLHLIRCLNVASVEW 179
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQISCSKVTDSGIAYLKGLQKL 206
L L LE L IK C I + D+ L + L SLQ D+ Y+K +
Sbjct: 180 LEYFGKLETLEELCIKNCRAIGEGDLIKLRNSWRKLTSLQFE----VDANYRYMKVYDQ- 234
Query: 207 TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
L++E P L SL L+L C ++ G +
Sbjct: 235 --LDVERWP------KQLVPCDSLVELSLGNCIIAP---------------GRGLACVLR 271
Query: 267 ECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-------------------GLCNLKCLE 306
C NLE L+LD C G+ D ++ L L N L
Sbjct: 272 NC-------KNLEKLHLDMCTGVSDSDIIALVQKASHLRSISLRVPSDFTLPLLNNITLR 324
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS-----------SLKSLNL 355
L+D + S+ +H S LES +SF SDG L + ++ L+L
Sbjct: 325 LTDESL-SAIAQHCS---KLESFKISF---SDGEFPSLFSFTLQGIITLIQKCPVRELSL 377
Query: 356 DARQI-TDTGLAALTSLTGLTHLDLFGAR-ITDSGAAYLRNFKNLRSLEICGG-GLTDAG 412
D + D G+ AL S L L+L + ++D G + F +L L++ G+TD G
Sbjct: 378 DHVCVFNDMGMEALCSAQKLEILELVHCQEVSDEGLILVSQFPSLNVLKLSKCLGVTDDG 437
Query: 413 VKHIKDLSSLTLL 425
++ + L LL
Sbjct: 438 MRPLVGSHKLELL 450
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 27 AFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLS-GSD------------VTDS 72
R+C L+ L L GV+D + + + S L S+ L SD +TD
Sbjct: 269 VLRNCKNLEKLHLDMCTGVSDSDIIALVQKASHLRSISLRVPSDFTLPLLNNITLRLTDE 328
Query: 73 GLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLI 131
L + + CS L+S +F SDG L SF T QG+
Sbjct: 329 SLSAIAQHCSKLESFKISF----SDGEFPSL--------FSF------TLQGIITLIQKC 370
Query: 132 NLVKLDLER-CTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-C 189
+ +L L+ C G+ L KLE L + C ++D + +S +L L++S C
Sbjct: 371 PVRELSLDHVCVFNDMGMEALCSAQKLEILELVHCQEVSDEGLILVSQFPSLNVLKLSKC 430
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGCP 215
VTD G+ L G KL LL +E CP
Sbjct: 431 LGVTDDGMRPLVGSHKLELLVVEDCP 456
>sp|Q6UY18|LIGO4_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 4 OS=Homo sapiens GN=LINGO4
PE=2 SV=1
Length = 593
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 114/263 (43%), Gaps = 14/263 (5%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT---AACLDSLSALGSLFY 232
LS L+ L+ L +S ++++ GLQ L L L+G + LSAL +L
Sbjct: 80 LSRLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSAL-TLLD 138
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG---IG 289
L LN+ L DG F ++GSL+ L +G N + GL L +L L+ C +
Sbjct: 139 LRLNQIVLFLDGA--FGELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVP 196
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE-SINLSFTGISDGSLRKLAGLS 348
L L L L+ EL ++ + LR L L LE + S + GSL L
Sbjct: 197 GLALARLPALVALRLRELDIGRLPAGALRGLGQLKELEIHLWPSLEALDPGSLVGL---- 252
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
+L SL + ++ AL L+ L LDL I+ A L L+ L + G L
Sbjct: 253 NLSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSGACL 312
Query: 409 TDAGVKHIKDLSSLTLLNLSQNC 431
T L++ LL+++ N
Sbjct: 313 TSIAAHAFHGLTAFHLLDVADNA 335
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 96/255 (37%), Gaps = 33/255 (12%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDF--NFCIQISDGGLEHLRGLSNLTSLSFRR 115
SLL++ L G+ + G S L LD N + DG L L L
Sbjct: 109 SLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVLFLDGAFGELGSLQKLEV----G 164
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+N + AFAGL L L LERC L + GL
Sbjct: 165 DNHLVFVAPGAFAGLAKLSTLTLERCN-----LSTVPGLA-------------------- 199
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG-SLFYLN 234
L+ L L +L++ + L+GL +L L + P A LD S +G +L L
Sbjct: 200 LARLPALVALRLRELDIGRLPAGALRGLGQLKELEIHLWPSLEA-LDPGSLVGLNLSSLA 258
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
+ RC LS + + L+VL+L N I+ L L L+ L L +
Sbjct: 259 ITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAH 318
Query: 295 NLTGLCNLKCLELSD 309
GL L+++D
Sbjct: 319 AFHGLTAFHLLDVAD 333
>sp|Q5UQA7|YR542_MIMIV Putative F-box/LRR-repeat protein R542 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_R542 PE=4 SV=1
Length = 558
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 149/364 (40%), Gaps = 80/364 (21%)
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN---LKGLMKLESLNI 162
N S SF N +K + RC + +N LK L + SLNI
Sbjct: 42 QNPKSFSFNLKNCNPKDSIKYLQSV---------RCLNLSKSTINDDQLKYLSDVYSLNI 92
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCS-KVTDSGIAYLKGLQKLTLLNLEGC-PVTAAC 220
C ITD + LS LT + L +S + +TD+G LK Q++ +NL C +T
Sbjct: 93 SNCKSITD---RGLSFLTQVVKLNVSYNGNITDNG---LKNFQRIKKINLCFCGKITDKG 146
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLKG----- 274
+++L +L SD+ + I +++ +NL IT +CL HL+
Sbjct: 147 IENLVYGKTLN---------SDEPIP--TVINTIRKINLQCCMRITSKCLQHLRRARSIN 195
Query: 275 --------------LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
+ N+E+L +D + D+ L NL + + + HL
Sbjct: 196 MLYGPQTYNEDLQYIPNIETLKIDGLDVSDKNLTNLKYVKYI----FFGRNYPVIFMSHL 251
Query: 321 SGLTNL---------ESINLS-FTGISDGSL--------RKLAGLSSLKSLNL-DARQIT 361
LT L E I+ + + L +L GLS ++ LNL + IT
Sbjct: 252 DKLTKLILPNVPEHIEYIDFNKMPNLVKADLSGCINLLDEQLKGLSKVRKLNLKECYDIT 311
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG-GLTDAGVKHIKDLS 420
D GL+ LT + + F RITDSG YL N + ICG +T+ G ++K +
Sbjct: 312 DVGLSYLTMVKKINISYCF--RITDSGLKYL---SNADYVNICGCLKITNEGFFYLKKVP 366
Query: 421 SLTL 424
L +
Sbjct: 367 KLVV 370
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 127/287 (44%), Gaps = 49/287 (17%)
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
F + NLVK DL C + LKGL K+ LN+K C ITD LS LT +K +
Sbjct: 271 FNKMPNLVKADLSGCINLLDE--QLKGLSKVRKLNLKECYDITDVG---LSYLTMVKKIN 325
Query: 187 IS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFY----LNLNRCQL 240
IS C ++TDSG+ YL +N+ GC +T L + L L+L C +
Sbjct: 326 ISYCFRITDSGLKYLSNAD---YVNICGCLKITNEGFFYLKKVPKLVVGYTTLSLYDCMI 382
Query: 241 SDDGCEKFSKI---GSLKVLNLG----FNEITDECL---------VHLKGLTNLESL--- 281
DGC + + + K L G + E T + V LK TNL +L
Sbjct: 383 --DGCGDYEYLTISDNTKQLITGKAFHYLENTSQIKIINCNNIIDVDLKSFTNLPTLSKI 440
Query: 282 NLDSC-GIGDEGLVNLTGLCNLKCLELSDT-QVGSSGLRHLSGLTNLESINLSFTGISDG 339
+L C I ++G L+ LCN+ +++S+ Q+ S G +S LTN + I++ S
Sbjct: 441 DLRYCNNITNQG---LSALCNIPIVKISNNYQISSKG---ISYLTNSKKISIE----SCP 490
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
+ L+ LK L + + + + +L H+D D
Sbjct: 491 KINSFPNLTGLKKLVF--KTMGKINMQLIQNLNEYYHIDTIHVYYRD 535
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 122/269 (45%), Gaps = 44/269 (16%)
Query: 60 LSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAI 119
L+V +G ++TD+GL K+ ++ ++ FC +I+D G+E+L L S
Sbjct: 112 LNVSYNG-NITDNGL---KNFQRIKKINLCFCGKITDKGIENLVYGKTLNS--------- 158
Query: 120 TAQGMKAFAGLINLV-KLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+ +IN + K++L+ C RI L+ L + S+N+ + + D L
Sbjct: 159 ----DEPIPTVINTIRKINLQCCMRITSKC--LQHLRRARSINMLYGPQTYNED---LQY 209
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ N+++L+I V+D + LK ++ + G + L L L N+
Sbjct: 210 IPNIETLKIDGLDVSDKNLTNLKYVKYIFF----GRNYPVIFMSHLDKLTKLILPNVPEH 265
Query: 239 QLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNL 296
D F+K+ +L +L G + DE LKGL+ + LNL C I D GL L
Sbjct: 266 IEYID----FNKMPNLVKADLSGCINLLDE---QLKGLSKVRKLNLKECYDITDVGLSYL 318
Query: 297 TGLCNLK---CLELSDTQVGSSGLRHLSG 322
T + + C ++D SGL++LS
Sbjct: 319 TMVKKINISYCFRITD-----SGLKYLSN 342
>sp|P70389|ALS_MOUSE Insulin-like growth factor-binding protein complex acid labile
subunit OS=Mus musculus GN=Igfals PE=2 SV=1
Length = 603
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 130/331 (39%), Gaps = 6/331 (1%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLES 159
RGLS+L L+ N+ + F GL NL +L L + T + L L GL +L
Sbjct: 166 FRGLSHLWDLNLGWNSLVVLPD-TVFQGLGNLHELVLAGNKLTYLQPAL--LCGLGELRE 222
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
L++ N + L L+ L + + +T G++ L L+L V
Sbjct: 223 LDLS-RNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGL 281
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
D+ L L L L ++ F + L+ L LG N I +GL LE
Sbjct: 282 LEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLE 341
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
L L+ I + + GL N+ + LS + S GL L S++L + +
Sbjct: 342 VLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRI 401
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
L AGLS L+ L L I+ +L L+ L LDL ++T + L
Sbjct: 402 RLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLE 461
Query: 400 SLEICGGGLTDAGVKHIKDLSSLTLLNLSQN 430
L + LT + L L+LS N
Sbjct: 462 YLLLSNNQLTMLSEDVLGPLQRAFWLDLSHN 492
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 119/300 (39%), Gaps = 28/300 (9%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN-LKGLMKLESLNIK 163
L L L RN ITA +AF G+ L LDL R+ G L + GL+ L L +
Sbjct: 241 LPRLQKLYLDRN-LITAVAPRAFLGMKALRWLDLSH-NRVAGLLEDTFPGLLGLHVLRLA 298
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
N IT + L L+ LQ+ +++ G +GL
Sbjct: 299 -HNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGL-------------------- 337
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
G L L LN Q+ + F + ++ V+NL N + +GL L SL+L
Sbjct: 338 ----GQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHL 393
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
+ +G L GL L+ L L D + S + L+GL+ L ++L+ ++ +
Sbjct: 394 EHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQL 453
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
GL L+ L L Q+T L L LDL R+ + LR L +
Sbjct: 454 FQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSLGRLRYLNL 513
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 7/193 (3%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QI + + GL N+ ++ N + + F GL L L LE L
Sbjct: 349 QIHEVKVGAFFGLFNVAVMNLS-GNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFA 407
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
GL L L ++ N I+ + + L+GL+ L L ++ +++T +GL +L L L
Sbjct: 408 GLSGLRRLFLR-DNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLLLS 466
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
+T D L L F+L+L+ +L FS +G L+ LNL N + + V
Sbjct: 467 NNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSLGRLRYLNLRNNSL--QTFVPQ 524
Query: 273 KGLTNLESLNLDS 285
G LE L LD+
Sbjct: 525 PG---LERLWLDA 534
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 115/304 (37%), Gaps = 62/304 (20%)
Query: 183 KSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
++L + + ++ A + L L LNL+G + + +L L +L++L+L R L
Sbjct: 77 RALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRS 136
Query: 243 DGCEKFSKIGSLKVLNLGFNEI--TDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT--- 297
F SL L+LG N + +E L +GL++L LNL G LV L
Sbjct: 137 LAAGLFRHTPSLASLSLGNNLLGRLEEGL--FRGLSHLWDLNL-----GWNSLVVLPDTV 189
Query: 298 --GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
GL NL L L+ ++ L GL L ++LS + L L+ L L
Sbjct: 190 FQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYL 249
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARIT----DSGAAYL-----------------RN 394
D IT A + L LDL R+ D+ L R
Sbjct: 250 DRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRT 309
Query: 395 FKNLRSLEICGGG----------------------LTDAGVKHIK-----DLSSLTLLNL 427
FK+L LE G L D + +K L ++ ++NL
Sbjct: 310 FKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNL 369
Query: 428 SQNC 431
S NC
Sbjct: 370 SGNC 373
>sp|Q8CDU4|FXL13_MOUSE F-box/LRR-repeat protein 13 OS=Mus musculus GN=Fbxl13 PE=2 SV=2
Length = 790
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 151/353 (42%), Gaps = 45/353 (12%)
Query: 131 INLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG------------ 178
+N+++L+ C L + L+ LN+ C TD M+ +S
Sbjct: 305 LNVLRLNFRGCDFRTKTLKAVSHCKNLQELNVSDCQSFTDESMRHISEGCPGVLYLNLSN 364
Query: 179 --------------LTNLKSLQIS-CSKVTDSGIAYLK---GLQKLTLLNLEGCPVTAAC 220
NL++L ++ C K TD G+ YL G KL L+L GC T
Sbjct: 365 TTITNRTMRLLPRYFHNLQNLSLAYCRKFTDKGLQYLNLGNGCHKLIYLDLSGC--TQVL 422
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-KGLTNLE 279
++ + S+ + +SD + S K+ G I+D C + + +
Sbjct: 423 VEKCPRISSVVLIGSP--HISDSAFKALSSCDLKKIRFEGNKRISDACFKSIDRNYPGIN 480
Query: 280 SLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHL-SGLTNLESINLSFTGI 336
+ + C G+ D L +L+ L L L L++ ++G GL+H G ++ L+ T
Sbjct: 481 HIYMVDCKGLTDSSLKSLSLLKQLTVLNLTNCIRIGDIGLKHFFDGPASIRLRELNLTNC 540
Query: 337 S---DGSLRKLAGL-SSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
S D S+ +L+ +L LNL + +TD + + S+ L +DL G I++ G
Sbjct: 541 SLLGDSSVIRLSERCPNLHYLNLRNCEHLTDLAIEYIASMLSLISVDLSGTLISNEGMTI 600
Query: 392 LRNFKNLRSLEICG-GGLTDAGVK-HIKDLSSLTLLNLSQNCNLTDKTLELIS 442
L + LR + + +TD G++ + K L L++S LTD ++ I+
Sbjct: 601 LSRHRKLREVSVSDCVNITDFGIRAYCKTSLLLEHLDVSYCSQLTDDIIKTIA 653
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 183/405 (45%), Gaps = 31/405 (7%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRN 116
++L ++ G D L + C NLQ L+ + C +D + H+ G + L+ N
Sbjct: 306 NVLRLNFRGCDFRTKTLKAVSHCKNLQELNVSDCQSFTDESMRHISEGCPGVLYLNL-SN 364
Query: 117 NAITAQGMKAFAGLI-NLVKLDLERCTRI-HGGLVNL---KGLMKLESLNIKWCNCITDS 171
IT + M+ NL L L C + GL L G KL L++ C +
Sbjct: 365 TTITNRTMRLLPRYFHNLQNLSLAYCRKFTDKGLQYLNLGNGCHKLIYLDLSGCTQVLVE 424
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSA-LGS 229
+S + + S IS DS L L + EG ++ AC S+
Sbjct: 425 KCPRISSVVLIGSPHIS-----DSAFKALSSCD-LKKIRFEGNKRISDACFKSIDRNYPG 478
Query: 230 LFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHL---KGLTNLESLNLD 284
+ ++ + C+ L+D + S + L VLNL I D L H L LNL
Sbjct: 479 INHIYMVDCKGLTDSSLKSLSLLKQLTVLNLTNCIRIGDIGLKHFFDGPASIRLRELNLT 538
Query: 285 SCG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFTGISDGSL 341
+C +GD ++ L+ C NL L L + + + + +++ + +L S++LS T IS+ +
Sbjct: 539 NCSLLGDSSVIRLSERCPNLHYLNLRNCEHLTDLAIEYIASMLSLISVDLSGTLISNEGM 598
Query: 342 RKLAGLSSLKSLNL-DARQITDTGLAAL--TSLTGLTHLDL-FGARITDSGAAYLRNF-K 396
L+ L+ +++ D ITD G+ A TSL L HLD+ + +++TD + F
Sbjct: 599 TILSRHRKLREVSVSDCVNITDFGIRAYCKTSLL-LEHLDVSYCSQLTDDIIKTIAIFCT 657
Query: 397 NLRSLEICG-GGLTDAGVKHIK-DLSSLTLLNLSQNCNLTDKTLE 439
+ SL I G +TDAG++ + L +L++S LTD+ ++
Sbjct: 658 RITSLNIAGCPKITDAGMEILSARCHYLHILDISGCIQLTDQIIQ 702
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 30/176 (17%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
SL+SVDLSG+ +++ G+ L L+ + + C+ I+D G +R + L
Sbjct: 582 SLISVDLSGTLISNEGMTILSRHRKLREVSVSDCVNITDFG---IRAYCKTSLL------ 632
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM--KLESLNIKWCNCITDSDMKP 175
L LD+ C+++ ++ + ++ SLNI C ITD+ M+
Sbjct: 633 ---------------LEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDAGMEI 677
Query: 176 LSGLTN-LKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGCP-VTAACLDSLSAL 227
LS + L L IS C ++TD I L+ G ++L +L ++ C ++ A +S++
Sbjct: 678 LSARCHYLHILDISGCIQLTDQIIQDLQIGCKQLRILKMQFCKSISPAAAQKMSSV 733
Score = 40.8 bits (94), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 137/332 (41%), Gaps = 81/332 (24%)
Query: 41 YPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLE 100
YPG+N +M VD G +TDS L L L L+ CI+I D GL+
Sbjct: 476 YPGINHIYM------------VDCKG--LTDSSLKSLSLLKQLTVLNLTNCIRIGDIGLK 521
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
H S+ R N + G ++++L ERC +H L
Sbjct: 522 HF--FDGPASIRLRELNLTNC----SLLGDSSVIRLS-ERCPNLH-------------YL 561
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP----- 215
N++ C +TD ++ ++ + +L S+ +S + +++ G+ L +KL +++ C
Sbjct: 562 NLRNCEHLTDLAIEYIASMLSLISVDLSGTLISNEGMTILSRHRKLREVSVSDCVNITDF 621
Query: 216 -VTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+ A C SL L +L+++ C QL+DD I ++ +
Sbjct: 622 GIRAYCKTSL----LLEHLDVSYCSQLTDDI------IKTIAIF---------------- 655
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNL-------KCLELSDTQVGSSGLRHLSGLTN 325
T + SLN+ C I D G+ L+ C+ C++L+D + + G
Sbjct: 656 -CTRITSLNIAGCPKITDAGMEILSARCHYLHILDISGCIQLTDQIIQDLQI----GCKQ 710
Query: 326 LESINLSF-TGISDGSLRKLAGLSSLKSLNLD 356
L + + F IS + +K++ + + N D
Sbjct: 711 LRILKMQFCKSISPAAAQKMSSVVQHQEYNSD 742
>sp|Q8LB33|FB330_ARATH F-box protein At3g58530 OS=Arabidopsis thaliana GN=At3g58530 PE=2
SV=1
Length = 353
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 116/237 (48%), Gaps = 35/237 (14%)
Query: 216 VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKI-GSLKVLNLGFN-EITDECLVHL 272
V C D AL SL +LNLN CQ +SD+G E + I LKV ++ +N +TD
Sbjct: 102 VKTECPD---ALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDA----- 153
Query: 273 KGLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
G+ NL + +C I D +NL+G C L+D + +LES+N+
Sbjct: 154 -GIRNL----VKNCRHITD---LNLSG-----CKSLTDKSMQLVA----ESYPDLESLNI 196
Query: 332 S--FTGISDGSLRKLAGLSSLKSLNLDARQ-ITDTGLAALTSLTGLTHLDLFGAR-ITDS 387
+ DG L+ L SL++LNL A TD ++ L L LD+ GA+ I+D
Sbjct: 197 TRCVKITDDGLLQVLQKCFSLQTLNLYALSGFTDKAYMKISLLADLRFLDICGAQNISDE 256
Query: 388 GAAYLRNFKNLRSLEICG-GGLTDAGVKHIKD-LSSLTLLNLSQNCNLTDKTLELIS 442
G ++ L SL + +TDAGV I + +SL L+L +TD+ LE +S
Sbjct: 257 GIGHIAKCNKLESLNLTWCVRITDAGVNTIANSCTSLEFLSLFGIVGVTDRCLETLS 313
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 248 FSKIGSLKVLNLGFNE-ITDECLVHLK--------GLTNLESLNLDSC-GIGDEGLVNLT 297
+ +K +NL F + + D HLK L +LE LNL+ C I D G+ +T
Sbjct: 77 LPRYRQVKHINLEFAQGVVDS---HLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAIT 133
Query: 298 GLC-NLKCLELS-DTQVGSSGLRHL-SGLTNLESINLS-FTGISDGSLRKLA-GLSSLKS 352
+C LK + + +V +G+R+L ++ +NLS ++D S++ +A L+S
Sbjct: 134 SICPKLKVFSIYWNVRVTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLES 193
Query: 353 LNLD-ARQITDTGL-AALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICGG-GL 408
LN+ +ITD GL L L L+L+ + TD + +LR L+ICG +
Sbjct: 194 LNITRCVKITDDGLLQVLQKCFSLQTLNLYALSGFTDKAYMKISLLADLRFLDICGAQNI 253
Query: 409 TDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELIS 442
+D G+ HI + L LNL+ +TD + I+
Sbjct: 254 SDEGIGHIAKCNKLESLNLTWCVRITDAGVNTIA 287
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 105/243 (43%), Gaps = 57/243 (23%)
Query: 69 VTDSGLIHLK-DCSN----LQSLDFNFCIQISDGGLEHLRGL-SNLTSLSFRRNNAITAQ 122
V DS L +K +C + L+ L+ N C +ISD G+E + + L S N +T
Sbjct: 94 VVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDA 153
Query: 123 GMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS-GLTN 181
G++ NLVK C I LN+ C +TD M+ ++ +
Sbjct: 154 GIR------NLVK----NCRHI-------------TDLNLSGCKSLTDKSMQLVAESYPD 190
Query: 182 LKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ- 239
L+SL I+ C K+TD G+ L+ LQK C SL LNL
Sbjct: 191 LESLNITRCVKITDDGL--LQVLQK--------------CF-------SLQTLNLYALSG 227
Query: 240 LSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT 297
+D K S + L+ L++ G I+DE + H+ LESLNL C I D G+ +
Sbjct: 228 FTDKAYMKISLLADLRFLDICGAQNISDEGIGHIAKCNKLESLNLTWCVRITDAGVNTIA 287
Query: 298 GLC 300
C
Sbjct: 288 NSC 290
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 25 LEAFRDC-ALQDLCLGQYPGVNDK-WMDVIASQGSSLLSVDLSGS-DVTDSGLIHLKDCS 81
L+ + C +LQ L L G DK +M + S + L +D+ G+ +++D G+ H+ C+
Sbjct: 208 LQVLQKCFSLQTLNLYALSGFTDKAYMKI--SLLADLRFLDICGAQNISDEGIGHIAKCN 265
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
L+SL+ +C++I+D G+ + ++ TSL F
Sbjct: 266 KLESLNLTWCVRITDAGVNTIA--NSCTSLEF 295
Score = 38.9 bits (89), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 77/145 (53%), Gaps = 35/145 (24%)
Query: 311 QVGSSGLRHLSGLT-----NLESINLSFT-GISDGSLRKLA-----GLSSLKSLNLDA-R 358
++ ++G R L+ L+ ++ INL F G+ D L+ + L SL+ LNL+ +
Sbjct: 63 EMTNAGDRLLAALSLPRYRQVKHINLEFAQGVVDSHLKLVKTECPDALLSLEWLNLNVCQ 122
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKH-IK 417
+I+D G+ A+TS+ L +F + N+R +TDAG+++ +K
Sbjct: 123 KISDNGIEAITSICP--KLKVFSI------------YWNVR--------VTDAGIRNLVK 160
Query: 418 DLSSLTLLNLSQNCNLTDKTLELIS 442
+ +T LNLS +LTDK+++L++
Sbjct: 161 NCRHITDLNLSGCKSLTDKSMQLVA 185
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 26/162 (16%)
Query: 81 SNLQSLDFNFCIQISDGGL-EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE 139
+L+SL+ C++I+D GL + L+ +L +L+ + T + + L +L LD+
Sbjct: 189 PDLESLNITRCVKITDDGLLQVLQKCFSLQTLNLYALSGFTDKAYMKISLLADLRFLDIC 248
Query: 140 RCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIA 198
I G+ ++ KLESLN+ WC ITD+ + ++ SC+
Sbjct: 249 GAQNISDEGIGHIAKCNKLESLNLTWCVRITDAGVNTIAN---------SCT-------- 291
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGS--LFYLNLNRC 238
L+ L+L + G VT CL++LS S L L++N C
Sbjct: 292 ---SLEFLSLFGIVG--VTDRCLETLSQTCSTTLTTLDVNGC 328
>sp|Q5TJ59|TLR3_BOVIN Toll-like receptor 3 OS=Bos taurus GN=TLR3 PE=2 SV=1
Length = 904
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 136/330 (41%), Gaps = 47/330 (14%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
L +L LS NN I ++F GL NL +LDL R ++L L K++ + +W
Sbjct: 298 LPHLEYLSLEYNN-IEHLSSRSFYGLSNLRRLDLRRSFTRQS--ISLTSLPKIDDFSFQW 354
Query: 165 CNCIT----DSDMKP------LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
C+ D + P +GL LK L +S S + L+ L T L+L GC
Sbjct: 355 LKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSS------LRTLTNETFLSLAGC 408
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLK 273
P L L+L + ++S FS +G L+VL+LG NEI E +
Sbjct: 409 P--------------LLLLDLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEWR 454
Query: 274 GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL-----ELSDTQVGSSGLRHLSGLTNLES 328
GL N+ + L + + T + +L+ L L + S R L L L+
Sbjct: 455 GLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVILDL 514
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAA-----LTSLTGLTHLDLFGAR 383
N + I+D L+ GL L+ L+L + A + L GL HL +
Sbjct: 515 SNNNIANINDELLK---GLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNLG 571
Query: 384 ITDSGAAYLRNFKNLRSLEICGGGLTDAGV 413
+ FK+LR L+ G+ + +
Sbjct: 572 SNGFDEIPVEAFKDLRELKSIDLGMNNLNI 601
>sp|O94898|LRIG2_HUMAN Leucine-rich repeats and immunoglobulin-like domains protein 2
OS=Homo sapiens GN=LRIG2 PE=2 SV=3
Length = 1065
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 119/271 (43%), Gaps = 10/271 (3%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT---AACLD 222
N I + + + L L+SL +S + +++ + +Q L LNL +T A C D
Sbjct: 130 NIIPEINAQALQFYPALESLDLSSNIISEIKTSSFPRMQ-LKYLNLSNNRITTLEAGCFD 188
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
+LS+ SL + LNR ++S + F K+ L+ L L N I + +GL +L SL
Sbjct: 189 NLSS--SLLVVKLNRNRMSMIPPKIF-KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLK 245
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
+ GI GL N++ LEL + L GL L+ + +S I S
Sbjct: 246 MQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPD 305
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
L L+L Q+T +A L+ L L+L R+T R NL++L+
Sbjct: 306 AWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLD 365
Query: 403 ICGGGLTDA---GVKHIKDLSSLTLLNLSQN 430
+ ++ A + L+SLT L L N
Sbjct: 366 LRNNEISWAIEDASEAFAGLTSLTKLILQGN 396
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 114/292 (39%), Gaps = 47/292 (16%)
Query: 105 LSNLTSLSFRR---------NNAITAQGMKAFAGLIN---LVKLDLERCTRIHGGLVNLK 152
+S + + SF R NN IT F L + +VKL+ R + I + L
Sbjct: 156 ISEIKTSSFPRMQLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMSMIPPKIFKLP 215
Query: 153 GL--MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS---CSKVTDSGIAYLKGLQKLT 207
L ++L+ IK +T GL +L+SL++ SK+ D L +++L
Sbjct: 216 HLQFLELKRNRIKIVEGLT------FQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELE 269
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L + V L L L L+ ++S D E + L L+L +N++T
Sbjct: 270 LEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQR---LSELDLSYNQLTRL 326
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
GL+ LE LNL GD + T + R LS L L+
Sbjct: 327 DESAFVGLSLLERLNL-----GDNRV----------------THIADGVFRFLSNLQTLD 365
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
N + + + AGL+SL L L QI A L L HLDL
Sbjct: 366 LRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDL 417
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 6/211 (2%)
Query: 130 LINLVKLDLERCT-RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
L +L L+L+R +I GL +GL L SL ++ N I+ GL N++ L++
Sbjct: 214 LPHLQFLELKRNRIKIVEGLT-FQGLDSLRSLKMQ-RNGISKLKDGAFFGLNNMEELELE 271
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
+ +T +L GL+ L L + + D+ L L+L+ QL+ F
Sbjct: 272 HNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAF 331
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG---DEGLVNLTGLCNLKCL 305
+ L+ LNLG N +T + L+NL++L+L + I ++ GL +L L
Sbjct: 332 VGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKL 391
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
L Q+ S + GL +LE ++L+ I
Sbjct: 392 ILQGNQIKSITKKAFIGLESLEHLDLNNNAI 422
>sp|Q3URE9|LIGO2_MOUSE Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 2 OS=Mus musculus GN=Lingo2
PE=2 SV=1
Length = 606
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 108/273 (39%), Gaps = 40/273 (14%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N I + + + L NL+SL++ +++ + GL LT L++ + LD +
Sbjct: 91 NIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKI-VILLDYM- 148
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
F + +LK L +G N++ GL +LE L L+
Sbjct: 149 ----------------------FQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEK 186
Query: 286 C---GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
C + E L +L L L L+ + + L L NLE I L
Sbjct: 187 CNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLE--------IDYWPLL 238
Query: 343 KLAGLSSLKSLNLDARQITDTGLA-----ALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
L +SL LNL + IT+T L+ A L LTHL+L I+ A +
Sbjct: 239 DLMPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIR 298
Query: 398 LRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQN 430
L+ L I G L + L L +LN+SQN
Sbjct: 299 LQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQN 331
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 95/231 (41%), Gaps = 12/231 (5%)
Query: 212 EGCPVTAACLD-------SLSALGSLFYLNLNRCQLSDD---GCEK--FSKIGSLKVLNL 259
EG P+ LD S++ + Y L LSD+ E F+ + +L+ L L
Sbjct: 53 EGIPIETKILDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRL 112
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
N + L GL+NL L++ I L NLK LE+ D + R
Sbjct: 113 KGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRA 172
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
SGL +LE + L ++ L+ L SL +L+L I + + A L L +L++
Sbjct: 173 FSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEI 232
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQN 430
+ D A NL SL I L+ K L LT LNLS N
Sbjct: 233 DYWPLLDLMPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYN 283
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 7/243 (2%)
Query: 116 NNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
+N I AF L NL L L+ R + G+ GL L L+I + D
Sbjct: 90 DNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGV--FTGLSNLTKLDISENKIVILLDY 147
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
L NLKSL++ + + GL L L LE C +TA ++LS L SL L
Sbjct: 148 M-FQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIAL 206
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH-LKGLTNLESLNLDSCGIGDEG 292
+L +++ F ++ LK L + + + D + L GL NL SL++ + +
Sbjct: 207 HLKHLNINNMPVYAFKRLFHLKNLEIDYWPLLDLMPANSLYGL-NLTSLSITNTNLSTVP 265
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+ L L L LS + + S L L+ +++ + GL L+
Sbjct: 266 FLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRV 325
Query: 353 LNL 355
LN+
Sbjct: 326 LNV 328
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 11/210 (5%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDF--NFCIQISDGGLEHLRGLSNLTSLSFR 114
S+L +D+S + + +D NL+SL+ N + IS GL +L L+
Sbjct: 129 SNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFS---GLLSLEQLTLE 185
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
+ N +TA +A + L +L+ L L+ + + K L L++L I + + D+
Sbjct: 186 KCN-LTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEIDYWPLL---DLM 241
Query: 175 PLSGLT--NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
P + L NL SL I+ + ++ K L LT LNL P++ S L L
Sbjct: 242 PANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQE 301
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
L++ QL F + L+VLN+ N
Sbjct: 302 LHIVGAQLRTIEPHSFQGLRFLRVLNVSQN 331
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
K L+LS ++ S LE I+LS I++ L +L+SL L ++
Sbjct: 60 KILDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKL 119
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 422
L T L+ LT LD+ +I ++ NL+SLE+ L + L SL
Sbjct: 120 VPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSL 179
Query: 423 TLLNLSQNCNLTDKTLELISGI 444
L L + CNLT E +S +
Sbjct: 180 EQLTL-EKCNLTAVPTEALSHL 200
>sp|A2ARI4|LGR4_MOUSE Leucine-rich repeat-containing G-protein coupled receptor 4 OS=Mus
musculus GN=Lgr4 PE=2 SV=1
Length = 951
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 103/252 (40%), Gaps = 30/252 (11%)
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K LSGL LK L + +++ ++GL L L L+ +T+ DS L L +L
Sbjct: 99 KALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHL 158
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
L+ L++ S + +L+ L L N I+ I D
Sbjct: 159 WLDDNILTEVPVRPLSNLPTLQALTLALNNIS---------------------SIPDFAF 197
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
NL+ L L L + ++ S GL NLE+++L++ + D + + L SLK L
Sbjct: 198 TNLSSLV---VLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNL-DEFPQAIKALPSLKEL 253
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD--- 410
+ I+ A L + L+ ++ G + N +L SL I G L
Sbjct: 254 GFHSNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLVQWFP 313
Query: 411 --AGVKHIKDLS 420
AG H++ L+
Sbjct: 314 NLAGTVHLESLT 325
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 160/399 (40%), Gaps = 71/399 (17%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDF-----NFCIQISDGGLEHLRGLSNLTSLSF 113
L + L+G+D++ IH K S L+ L N Q+ E +RGLS L SL
Sbjct: 83 LEELQLAGNDLS---FIHPKALSGLKELKVLTLQNN---QLKTVPSEAIRGLSALQSLRL 136
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N+ IT+ +F GL+ L L L+ + L L L++L + N + D
Sbjct: 137 DANH-ITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDF 195
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL-----NLEGCPVTAACLDSLSALG 228
+ L++L L + +K+ GL L L NL+ P L SL LG
Sbjct: 196 A-FTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNLDEFPQAIKALPSLKELG 254
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
+ N + DG F+ L+ ++L N ++ L++L SL + +
Sbjct: 255 ----FHSNSISVIPDG--AFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASL 308
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGS----------------------SGLRHLSGLTNL 326
+ NL G +L+ L L+ T++ S L +G L
Sbjct: 309 V-QWFPNLAGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNDIRDLPSFNGCRAL 367
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDA---RQITDTGLAALTSLT----------- 372
E I+L IS GL+SL+ L+L R+I A L ++T
Sbjct: 368 EEISLQRNQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTS 427
Query: 373 -------GLTHLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
GL L L G ++ D+ AA R+F NLRSL +
Sbjct: 428 FPTEGLNGLNQLKLVGNFQLKDALAA--RDFANLRSLSV 464
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%)
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L+ L+L+ + + LSGL L+ + L + + GLS+L+SL LDA IT
Sbjct: 83 LEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT 142
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSS 421
+ L L HL L +T+ L N L++L + ++ +LSS
Sbjct: 143 SVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSS 202
Query: 422 LTLLNLSQN 430
L +L+L N
Sbjct: 203 LVVLHLHNN 211
Score = 39.3 bits (90), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 79/200 (39%), Gaps = 25/200 (12%)
Query: 255 KVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
+ L++ N IT K LE L L + L+GL LK L L + Q+ +
Sbjct: 60 QALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 119
Query: 315 SGLRHLSGLTNLESINL-----------SFTG-------------ISDGSLRKLAGLSSL 350
+ GL+ L+S+ L SF G +++ +R L+ L +L
Sbjct: 120 VPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTL 179
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
++L L I+ A T+L+ L L L +I NL +L++ L D
Sbjct: 180 QALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNL-D 238
Query: 411 AGVKHIKDLSSLTLLNLSQN 430
+ IK L SL L N
Sbjct: 239 EFPQAIKALPSLKELGFHSN 258
>sp|P58682|TLR8_MOUSE Toll-like receptor 8 OS=Mus musculus GN=Tlr8 PE=1 SV=2
Length = 1032
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 143/377 (37%), Gaps = 73/377 (19%)
Query: 50 DVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC------------IQISDG 97
+V + G + ++DLS + +T + NL +D N + I++G
Sbjct: 56 EVPQTIGKYVTNIDLSDNAITHITKESFQKLQNLTKIDLNHNAKQQHPNENKNGMNITEG 115
Query: 98 GLEHLRGLS------------------NLTSLSFRRNNAITAQGMKAFAGLINLVKLDL- 138
L LR L+ +L LS +NN F GL NL +L L
Sbjct: 116 ALLSLRNLTVLLLEDNQLYTIPAGLPESLKELSLIQNNIFQVTKNNTF-GLRNLERLYLG 174
Query: 139 -------ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK 191
+ ++ G K L+ L+ L++ + N P ++L+ L +S +K
Sbjct: 175 WNCYFKCNQTFKVEDGA--FKNLIHLKVLSLSFNNLFYVPPKLP----SSLRKLFLSNAK 228
Query: 192 VTDSGIAYLKGLQKLTLLNLEG-CP----VTAACLD------------SLSALGSLFYLN 234
+ + KGL+ LTLL+L G CP C + +L L YLN
Sbjct: 229 IMNITQEDFKGLENLTLLDLSGNCPRCYNAPFPCTPCKENSSIHIHPLAFQSLTQLLYLN 288
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL--VHLKGLTNLESLNLDSCGIGDEG 292
L+ L F + +LK L+L FN + E L L +L+ L+L E
Sbjct: 289 LSSTSLRTIPSTWFENLSNLKELHLEFNYLVQEIASGAFLTKLPSLQILDLSFNFQYKEY 348
Query: 293 LV------NLTGLCNLKCLELSDT---QVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
L N + L +LK L L ++ HL L NL +INL I +
Sbjct: 349 LQFINISSNFSKLRSLKKLHLRGYVFRELKKKHFEHLQSLPNLATINLGINFIEKIDFKA 408
Query: 344 LAGLSSLKSLNLDARQI 360
S L + L +I
Sbjct: 409 FQNFSKLDVIYLSGNRI 425
>sp|Q9D1T0|LIGO1_MOUSE Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Mus musculus GN=Lingo1
PE=1 SV=1
Length = 614
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 112/269 (41%), Gaps = 13/269 (4%)
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N ++A AF L NL L L R I G+ GL L L+I + D
Sbjct: 99 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGV--FTGLSNLTKLDISENKIVILLDYM 156
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L NLKSL++ + + GL L L LE C +T+ ++LS L L L
Sbjct: 157 -FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 215
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L ++ F ++ LKVL + + +T CL L NL SL++ C +
Sbjct: 216 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL----NLTSLSITHCNLTA 271
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ + L L+ L LS +G+ L L L+ I L ++ GL+ L
Sbjct: 272 VPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYL 331
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDL 379
+ LN+ Q+T +A S+ L L L
Sbjct: 332 RVLNVSGNQLTTLEESAFHSVGNLETLIL 360
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L+L + ++ ++F+ L+ L L N ++ L NL +L L S +
Sbjct: 70 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 129
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
L TGL NL L++S+ ++ L NL+S+ + + S R +GL+SL+
Sbjct: 130 LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQ 189
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
L L+ +T AL+ L GL L L I + L+ LEI D
Sbjct: 190 LTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTM 249
Query: 413 VKHIKDLSSLTLLNLS-QNCNLT 434
+ L L L +LS +CNLT
Sbjct: 250 TPNC--LYGLNLTSLSITHCNLT 270
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 99/257 (38%), Gaps = 48/257 (18%)
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
D ++ L L LN +S F+ + +L+ L L N + L GL+NL L
Sbjct: 83 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKL 142
Query: 282 -------------------NLDSCGIGDEGLVNLT-----GLCNLKCLELSD---TQVGS 314
NL S +GD LV ++ GL +L+ L L T + +
Sbjct: 143 DISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 202
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK----------------SLNLDAR 358
L HL GL L +L+ I D S ++L L L+ LNL +
Sbjct: 203 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSL 262
Query: 359 QITDTGLAALT-----SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGV 413
IT L A+ L L L+L I + L L+ +++ GG L
Sbjct: 263 SITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEP 322
Query: 414 KHIKDLSSLTLLNLSQN 430
+ L+ L +LN+S N
Sbjct: 323 YAFRGLNYLRVLNVSGN 339
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
+ L+L ++ + + +LE + L+ +S L +L++L L + ++
Sbjct: 68 RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL 127
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 422
L T L+ LT LD+ +I ++ NL+SLE+ L + L+SL
Sbjct: 128 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 187
Query: 423 TLLNLSQNCNLTDKTLELISGI 444
L L + CNLT E +S +
Sbjct: 188 EQLTL-EKCNLTSIPTEALSHL 208
>sp|Q96IG2|FXL20_HUMAN F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2
Length = 436
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 138/355 (38%), Gaps = 88/355 (24%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C + +D L + S L L +IT +KA +
Sbjct: 114 QNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALS-------- 165
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LNI WC+ +T ++ L G LK+L +
Sbjct: 166 ---------------EGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLED 210
Query: 188 -------------------SCSKVTDSG-IAYLKGLQKLTLLNLEGCP-VTAACLDSLSA 226
+C ++TD G I +G KL L GC +T A L++L
Sbjct: 211 EALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQ 270
Query: 227 -LGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
L L + RC QL+D +GF + C LE ++L+
Sbjct: 271 NCPRLRILEVARCSQLTD----------------VGFTTLARNC-------HELEKMDLE 307
Query: 285 SC-GIGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHL----SGLTNLESINLSFTG-I 336
C I D L+ L+ C L+ L LS + + G+RHL LE I L I
Sbjct: 308 ECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLI 367
Query: 337 SDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
+D SL L SL+ + L D +QIT G+ L + + + A +T +
Sbjct: 368 TDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPPSV 422
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 133/298 (44%), Gaps = 57/298 (19%)
Query: 157 LESLNIKWCNCITDSDMKPLSGL-TNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
+E LN+ C TD+ LS + L+ L + SC+ +T+ + L EGC
Sbjct: 119 IEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALS----------EGC 168
Query: 215 PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDECLVH 271
P+ L LN++ C Q++ DG + + G LK L L G ++ DE L +
Sbjct: 169 PL-------------LEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKY 215
Query: 272 LKG-LTNLESLNLDSC-GIGDEGLV-------NLTGLCNLKCLELSDTQVGSSGLRHLSG 322
+ L +LNL +C I DEGL+ L LC C ++D + + G ++
Sbjct: 216 IGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALG-QNCPR 274
Query: 323 LTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALT------SLTGL 374
L LE S ++D LA L+ ++L+ QITD+ L L+ + L
Sbjct: 275 LRILEVARCS--QLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSL 332
Query: 375 THLDLFGARITDSGAAYLRN----FKNLRSLEICGGGL-TDAGVKHIKDLSSLTLLNL 427
+H +L ITD G +L N L +E+ L TDA ++H+K SL + L
Sbjct: 333 SHCEL----ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIEL 386
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+TD+ L HLK C +L+ ++ C QI+ G++ LR
Sbjct: 367 ITDASLEHLKSCHSLERIELYDCQQITRAGIKRLR 401
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 14 LVYSRC--LTEVSLEAF-RDC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD- 68
L +RC LT+V R+C L+ + L + + D + ++ L + LS +
Sbjct: 278 LEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCEL 337
Query: 69 VTDSGLIHLKD--CSN--LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G+ HL + C++ L+ ++ + C I+D LEHL+ +L + IT G+
Sbjct: 338 ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGI 397
Query: 125 KAFAGLINLVKL 136
K + +K+
Sbjct: 398 KRLRTHLPNIKV 409
>sp|Q58DG6|FXL20_BOVIN F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2
Length = 436
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 138/355 (38%), Gaps = 88/355 (24%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C + +D L + S L L +IT +KA +
Sbjct: 114 QNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALS-------- 165
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LNI WC+ +T ++ L G LK+L +
Sbjct: 166 ---------------EGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLED 210
Query: 188 -------------------SCSKVTDSG-IAYLKGLQKLTLLNLEGCP-VTAACLDSLSA 226
+C ++TD G I +G KL L GC +T A L++L
Sbjct: 211 EALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQ 270
Query: 227 -LGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
L L + RC QL+D +GF + C LE ++L+
Sbjct: 271 NCPRLRILEVARCSQLTD----------------VGFTTLARNC-------HELEKMDLE 307
Query: 285 SC-GIGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHL----SGLTNLESINLSFTG-I 336
C I D L+ L+ C L+ L LS + + G+RHL LE I L I
Sbjct: 308 ECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLI 367
Query: 337 SDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
+D SL L SL+ + L D +QIT G+ L + + + A +T +
Sbjct: 368 TDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPPSV 422
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 133/298 (44%), Gaps = 57/298 (19%)
Query: 157 LESLNIKWCNCITDSDMKPLSGL-TNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
+E LN+ C TD+ LS + L+ L + SC+ +T+ + L EGC
Sbjct: 119 IEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALS----------EGC 168
Query: 215 PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDECLVH 271
P+ L LN++ C Q++ DG + + G LK L L G ++ DE L +
Sbjct: 169 PL-------------LEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKY 215
Query: 272 LKG-LTNLESLNLDSC-GIGDEGLV-------NLTGLCNLKCLELSDTQVGSSGLRHLSG 322
+ L +LNL +C I DEGL+ L LC C ++D + + G ++
Sbjct: 216 IGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALG-QNCPR 274
Query: 323 LTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALT------SLTGL 374
L LE S ++D LA L+ ++L+ QITD+ L L+ + L
Sbjct: 275 LRILEVARCS--QLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSL 332
Query: 375 THLDLFGARITDSGAAYLRN----FKNLRSLEICGGGL-TDAGVKHIKDLSSLTLLNL 427
+H +L ITD G +L N L +E+ L TDA ++H+K SL + L
Sbjct: 333 SHCEL----ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIEL 386
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+TD+ L HLK C +L+ ++ C QI+ G++ LR
Sbjct: 367 ITDASLEHLKSCHSLERIELYDCQQITRAGIKRLR 401
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 14 LVYSRC--LTEVSLEAF-RDC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD- 68
L +RC LT+V R+C L+ + L + + D + ++ L + LS +
Sbjct: 278 LEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCEL 337
Query: 69 VTDSGLIHLKD--CSN--LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G+ HL + C++ L+ ++ + C I+D LEHL+ +L + IT G+
Sbjct: 338 ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGI 397
Query: 125 KAFAGLINLVKL 136
K + +K+
Sbjct: 398 KRLRTHLPNIKV 409
>sp|A2RT62|FXL16_MOUSE F-box/LRR-repeat protein 16 OS=Mus musculus GN=Fbxl16 PE=2 SV=1
Length = 479
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 25/225 (11%)
Query: 20 LTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDL-SGSDVTDSGLIHL- 77
L E+SL+A+ + D L + A QG S ++ L S ++T+ G++++
Sbjct: 270 LAELSLQAYH---VTDTALAYF----------TARQGHSTHTLRLLSCWEITNHGVVNVV 316
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVK 135
NL SL + C +++D G+E + L L SL IT ++ A L L +
Sbjct: 317 HSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEE 376
Query: 136 LDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVT 193
L L+RC RI GL L + L SL ++WC + D +K L + NL+ L ++ C +T
Sbjct: 377 LVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLAMRNLRLLSLAGCPLLT 436
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+G++ L LQ+L L L CP + L F +L RC
Sbjct: 437 TTGLSGLVQLQELEELELTNCP------GATPELFKYFSQHLPRC 475
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 27/258 (10%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAF---------AGL-------INLVKLDLERCTRIH 145
L G+S+L F N +++ +G+KA AGL +V+L+L C
Sbjct: 173 LVGVSDLDICEFIDNYSLSKKGVKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFT 232
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL-TNLKSLQISCSKVTDSGIAYL---K 201
+ ++ SL++ C + D + +S L NL L + VTD+ +AY +
Sbjct: 233 EAGLWSSLSARITSLSVSDCINVADDAIAAISQLLPNLAELSLQAYHVTDTALAYFTARQ 292
Query: 202 GLQKLTLLNLEGCPVT-AACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLN 258
G TL L +T ++ + +L +L L+L+ C +++DDG E ++ + L+ L+
Sbjct: 293 GHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLD 352
Query: 259 LGF-NEITDECLVHLK-GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGS 314
L + ITD L ++ L LE L LD C I D GL L+ + +L+ L L QV
Sbjct: 353 LSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQD 412
Query: 315 SGLRHLSGLTNLESINLS 332
GL+HL + NL ++L+
Sbjct: 413 FGLKHLLAMRNLRLLSLA 430
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 130/272 (47%), Gaps = 44/272 (16%)
Query: 182 LKSLQISCSKVTDSGI-AYLKGLQKLTLLNLEGCP--VTAACLDSLSALGSLFYLNLNRC 238
+K++ + S +TD+G+ L+ +Q + L L GC A SLSA + L+++ C
Sbjct: 195 VKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWSSLSA--RITSLSVSDC 252
Query: 239 -QLSDDGCEKFSKI-GSLKVLNLGFNEITDECLVHLKGLT--NLESLNLDSCG-IGDEGL 293
++DD S++ +L L+L +TD L + + +L L SC I + G+
Sbjct: 253 INVADDAIAAISQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGV 312
Query: 294 VNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINLSF-TGISDGSLRKLA-GLS 348
VN+ L NL L LS ++V G+ ++ L L S++LS+ I+D +L +A L
Sbjct: 313 VNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLH 372
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI---CG 405
L+ L LD RITD+G +YL +LRSL + C
Sbjct: 373 RLEELVLDR-----------------------CVRITDTGLSYLSTMSSLRSLYLRWCC- 408
Query: 406 GGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKT 437
+ D G+KH+ + +L LL+L+ C L T
Sbjct: 409 -QVQDFGLKHLLAMRNLRLLSLA-GCPLLTTT 438
>sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3
Length = 436
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 158/400 (39%), Gaps = 81/400 (20%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHL---KDCSN-LQSLDFNFCIQISDGGL 99
V+ W +V+A GS+ +DL G + K C L+ L C+ + D L
Sbjct: 51 VSRAW-NVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNAL 109
Query: 100 EHL-RGLSNLTSLSFR---RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM 155
+ N+ LS + T + F L LDL CT I ++LK L
Sbjct: 110 RTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCS--KLRHLDLASCTSITN--MSLKALS 165
Query: 156 K----LESLNIKWCNCITDSDMKPL-SGLTNLKSLQI----------------------- 187
+ LE LNI WC+ +T ++ L G LK+L +
Sbjct: 166 EGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVT 225
Query: 188 ----SCSKVTDSG-IAYLKGLQKLTLLNLEGCP-VTAACLDSLSA-LGSLFYLNLNRC-Q 239
+C ++TD G I +G KL L GC +T A L++L L L + RC Q
Sbjct: 226 LNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQ 285
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTG 298
L+D +GF + C LE ++L+ C I D L+ L+
Sbjct: 286 LTD----------------VGFTTLARNC-------HELEKMDLEECVQITDSTLIQLSI 322
Query: 299 LC-NLKCLELSDTQ-VGSSGLRHL----SGLTNLESINLSFTG-ISDGSLRKLAGLSSLK 351
C L+ L LS + + G+RHL LE I L I+D SL L SL+
Sbjct: 323 HCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLE 382
Query: 352 SLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
+ L D +QIT G+ L + + + A +T +
Sbjct: 383 RIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPPSV 422
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 142/303 (46%), Gaps = 41/303 (13%)
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYL-KGLQKLTLLNL 211
L L+++ C + D+ ++ + N +++++ C+K TD+ L K KL L+L
Sbjct: 93 LRKLSLRGCLGVGDNALRTFA--QNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDL 150
Query: 212 EGC-PVTAACLDSLSALGSLF-YLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITD 266
C +T L +LS L LN++ C Q++ DG + + G LK L L G ++ D
Sbjct: 151 ASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLED 210
Query: 267 ECLVHLKG-LTNLESLNLDSC-GIGDEGLV-------NLTGLCNLKCLELSDTQVGSSGL 317
E L ++ L +LNL +C I DEGL+ L LC C ++D + + G
Sbjct: 211 EALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALG- 269
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALT------ 369
++ L LE S ++D LA L+ ++L+ QITD+ L L+
Sbjct: 270 QNCPRLRILEVARCS--QLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRL 327
Query: 370 SLTGLTHLDLFGARITDSGAAYLRN----FKNLRSLEICGGGL-TDAGVKHIKDLSSLTL 424
+ L+H +L ITD G +L N L +E+ L TDA ++H+K SL
Sbjct: 328 QVLSLSHCEL----ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLER 383
Query: 425 LNL 427
+ L
Sbjct: 384 IEL 386
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 14 LVYSRC--LTEVSLEAF-RDC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD- 68
L +RC LT+V R+C L+ + L + + D + ++ L + LS +
Sbjct: 278 LEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCEL 337
Query: 69 VTDSGLIHLKD--CSN--LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G+ HL + C++ L+ ++ + C I+D LEHL+ +L + IT G+
Sbjct: 338 ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGI 397
Query: 125 KAFAGLINLVKL 136
K + +K+
Sbjct: 398 KRLRTHLPNIKV 409
>sp|P51886|LUM_RAT Lumican OS=Rattus norvegicus GN=Lum PE=2 SV=1
Length = 338
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 11/145 (7%)
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD-EGLVNLTGLCNLKCLE 306
FSK+ LK L++ +N +T+ K L +L+ N +G +GLVNLT + L+ +
Sbjct: 112 FSKLKQLKKLHINYNNLTESVGPLPKSLQDLQLANNKISKLGSFDGLVNLTFIY-LQHNQ 170
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL-SSLKSLNLDARQITDTGL 365
L + V +S L GL +LE ++LSF +S + AGL +SL +L LD +IT+
Sbjct: 171 LKEEAVSAS----LKGLKSLEYLDLSFNQMS----KLPAGLPTSLLTLYLDNNKITNIPD 222
Query: 366 AALTSLTGLTHLDLFGARITDSGAA 390
TGL +L L + DSG
Sbjct: 223 EYFNRFTGLQYLRLSHNELADSGVP 247
>sp|Q7L985|LIGO2_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 2 OS=Homo sapiens GN=LINGO2
PE=1 SV=1
Length = 606
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 109/273 (39%), Gaps = 40/273 (14%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N I + + + L NL+SL++ +++ + GL LT L++ + LD +
Sbjct: 91 NIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKI-VILLDYM- 148
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
F + +LK L +G N++ GL +LE L L+
Sbjct: 149 ----------------------FQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEK 186
Query: 286 C---GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
C + E L +L L +L L+ + + L L +LE I L
Sbjct: 187 CNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLE--------IDYWPLL 238
Query: 343 KLAGLSSLKSLNLDARQITDTGLA-----ALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
+ +SL LNL + +T+T L+ A L LTHL+L I+ A +
Sbjct: 239 DMMPANSLYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIR 298
Query: 398 LRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQN 430
L+ L I G L + L L +LN+SQN
Sbjct: 299 LQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQN 331
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 95/231 (41%), Gaps = 12/231 (5%)
Query: 212 EGCPVTAACLD-------SLSALGSLFYLNLNRCQLSDD---GCEK--FSKIGSLKVLNL 259
EG P+ LD S++ + Y L LSD+ E F+ + +L+ L L
Sbjct: 53 EGIPIETKILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRL 112
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
N + L GL+NL L++ I L NLK LE+ D + R
Sbjct: 113 KGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRA 172
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
SGL +LE + L ++ L+ L SL SL+L I + + A L L HL++
Sbjct: 173 FSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEI 232
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQN 430
+ D A NL SL + L+ K L LT LNLS N
Sbjct: 233 DYWPLLDMMPANSLYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYN 283
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 7/243 (2%)
Query: 116 NNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
+N I AF L NL L L+ R + G+ GL L L+I + D
Sbjct: 90 DNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGV--FTGLSNLTKLDISENKIVILLDY 147
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
L NLKSL++ + + GL L L LE C +TA ++LS L SL L
Sbjct: 148 M-FQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISL 206
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH-LKGLTNLESLNLDSCGIGDEG 292
+L +++ F ++ LK L + + + D + L GL NL SL++ + +
Sbjct: 207 HLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLYGL-NLTSLSVTNTNLSTVP 265
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+ L L L LS + + S L L+ +++ + GL L+
Sbjct: 266 FLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRV 325
Query: 353 LNL 355
LN+
Sbjct: 326 LNV 328
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
K L+LS ++ S LE I+LS I++ L +L+SL L ++
Sbjct: 60 KILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKL 119
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 422
L T L+ LT LD+ +I ++ NL+SLE+ L + L SL
Sbjct: 120 VPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSL 179
Query: 423 TLLNLSQNCNLTDKTLELISGI 444
L L + CNLT E +S +
Sbjct: 180 EQLTL-EKCNLTAVPTEALSHL 200
Score = 38.9 bits (89), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 30/187 (16%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT----------------RIH 145
+ L NL SL N+ + +AF+GL++L +L LE+C +H
Sbjct: 149 FQDLHNLKSLEVGDNDLVYI-SHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLH 207
Query: 146 GGLVNL--------KGLMKLESLNIKWCNCITDSDMKPLSGLT--NLKSLQISCSKVTDS 195
+N+ K L L+ L I + + DM P + L NL SL ++ + ++
Sbjct: 208 LKHLNINNMPVYAFKRLFHLKHLEIDYWPLL---DMMPANSLYGLNLTSLSVTNTNLSTV 264
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
K L LT LNL P++ S L L L++ QL F + L+
Sbjct: 265 PFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLR 324
Query: 256 VLNLGFN 262
VLN+ N
Sbjct: 325 VLNVSQN 331
>sp|O15455|TLR3_HUMAN Toll-like receptor 3 OS=Homo sapiens GN=TLR3 PE=1 SV=1
Length = 904
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 134/347 (38%), Gaps = 67/347 (19%)
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
F N I + GL N+ L+L+R ++L L K++ + +W C+ +
Sbjct: 304 FLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQS--ISLASLPKIDDFSFQWLKCLEHLN 361
Query: 173 MK----P------LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
M+ P +GL NLK L +S S + L+ L T ++L P
Sbjct: 362 MEDNDIPGIKSNMFTGLINLKYLSLSNSFTS------LRTLTNETFVSLAHSP------- 408
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTN---- 277
L LNL + ++S + FS +G L+VL+LG NEI E +GL N
Sbjct: 409 -------LHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEI 461
Query: 278 --------------------LESLNLDSCGIG--DEGLVNLTGLCNLKCLELSDTQVGSS 315
L+ L L + D L NL L+LS+ + +
Sbjct: 462 YLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANI 521
Query: 316 GLRHLSGLTNLESINLSFTGISD--------GSLRKLAGLSSLKSLNLDARQITDTGLAA 367
L GL LE ++L ++ G + L GLS L LNL++ + +
Sbjct: 522 NDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEV 581
Query: 368 LTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVK 414
L L +DL + A+ N +L+SL + +T K
Sbjct: 582 FKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKK 628
>sp|Q9BXB1|LGR4_HUMAN Leucine-rich repeat-containing G-protein coupled receptor 4 OS=Homo
sapiens GN=LGR4 PE=2 SV=2
Length = 951
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 103/252 (40%), Gaps = 30/252 (11%)
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K LSGL LK L + +++ ++GL L L L+ +T+ DS L L +L
Sbjct: 99 KALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHL 158
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
L+ L++ S + +L+ L L N+I+ I D
Sbjct: 159 WLDDNSLTEVPVHPLSNLPTLQALTLALNKIS---------------------SIPDFAF 197
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
NL+ L L L + ++ S GL NLE+++L++ + + + + L SLK L
Sbjct: 198 TNLSSLV---VLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFP-QAIKALPSLKEL 253
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD--- 410
+ I+ A L + L+ ++ G + N +L SL I G +
Sbjct: 254 GFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFP 313
Query: 411 --AGVKHIKDLS 420
G H++ L+
Sbjct: 314 NLTGTVHLESLT 325
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%)
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L+ L+L+ + + LSGL L+ + L + + GLS+L+SL LDA IT
Sbjct: 83 LEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT 142
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSS 421
+ L L HL L +T+ L N L++L + ++ +LSS
Sbjct: 143 SVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSS 202
Query: 422 LTLLNLSQN 430
L +L+L N
Sbjct: 203 LVVLHLHNN 211
>sp|Q5R3Z8|FBXL2_PONAB F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1
Length = 423
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 142/354 (40%), Gaps = 86/354 (24%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C +I+D L R S L L +IT +K +
Sbjct: 101 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGIS-------- 152
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LN+ WC+ IT ++ L G LK+L +
Sbjct: 153 ---------------EGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLED 197
Query: 188 -------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSA 226
SCS++TD G+ + +G +L L L GC +T A SL+A
Sbjct: 198 EALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDA---SLTA 254
Query: 227 LGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
LG LN R Q+ + C + + GF + C LE ++L+
Sbjct: 255 LG----LNCPRLQILEAARCSHLT--------DAGFTLLARNC-------HELEKMDLEE 295
Query: 286 CG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS----GLTNLESINL-SFTGIS 337
C I D L+ L+ C L+ L LS + + G+ HLS G L + L + I+
Sbjct: 296 CILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLIT 355
Query: 338 DGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
D +L L L+ L L D +Q+T G+ + + + + A +T A
Sbjct: 356 DVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPTAV 409
Score = 35.8 bits (81), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 69 VTDSGLIHLKDCS----NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G++HL + + L+ L+ + C+ I+D LEHL L L +T G+
Sbjct: 325 ITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGI 384
Query: 125 KAFAGLINLVKL 136
K + VK+
Sbjct: 385 KRMRAQLPHVKV 396
>sp|A4IIW9|LIGO1_XENTR Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Xenopus tropicalis
GN=lingo1 PE=2 SV=1
Length = 606
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 10/188 (5%)
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC---GIGDEGLVNLTGLCNLKC 304
F + +LK L +G N++ +GL +LE L L+ C + E L +L GL LK
Sbjct: 149 FQDLYNLKSLEVGDNDLVYISHRAFRGLNSLEELTLEKCNLTSVPTEALSHLHGLITLKL 208
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSF--TGISDGSLRKLAGLSSLKSLNLDARQITD 362
L+ + + L L NLE + + T S+G L GL+ L SL++ ++
Sbjct: 209 RYLNINVIRDYSFKRLYRLKNLEIAHWPYLDTMTSNG----LYGLN-LTSLSITHSNLSS 263
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 422
A+ L L L+L IT + L L+ + GG L+ + L+ L
Sbjct: 264 IPYVAIRHLVYLRFLNLSYNPITAVEGSMLYELLRLQEFHLVGGQLSVVEPYAFRGLNHL 323
Query: 423 TLLNLSQN 430
+LN+S N
Sbjct: 324 KVLNVSSN 331
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 139/355 (39%), Gaps = 40/355 (11%)
Query: 30 DCALQD---LCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSL 86
DC+ QD LC + +++DV + +DLS + + L+ L
Sbjct: 33 DCSPQDRSVLCHRK------RYLDVPEGIPTDTRLLDLSKNRIKALNQDEFSAFPYLEEL 86
Query: 87 DFNF-CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH 145
+ N + I + G GL NL SL R +N + + F GL NL +LD+ +
Sbjct: 87 ELNENIVSIIEPGA--FNGLFNLRSLGLR-SNRLKLIPLGVFTGLSNLTQLDISENKIV- 142
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
I DM L NLKSL++ + + +GL
Sbjct: 143 ----------------------ILLDDM--FQDLYNLKSLEVGDNDLVYISHRAFRGLNS 178
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
L L LE C +T+ ++LS L L L L ++ F ++ LK L +
Sbjct: 179 LEELTLEKCNLTSVPTEALSHLHGLITLKLRYLNINVIRDYSFKRLYRLKNLEIAHWPYL 238
Query: 266 DECLVH-LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLT 324
D + L GL NL SL++ + V + L L+ L LS + + L L
Sbjct: 239 DTMTSNGLYGL-NLTSLSITHSNLSSIPYVAIRHLVYLRFLNLSYNPITAVEGSMLYELL 297
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
L+ +L +S GL+ LK LN+ + ++ ++ S+ L L L
Sbjct: 298 RLQEFHLVGGQLSVVEPYAFRGLNHLKVLNVSSNYLSTLEESSFHSVGNLETLIL 352
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
+ L+LS ++ + S LE + L+ +S GL +L+SL L + ++
Sbjct: 60 RLLDLSKNRIKALNQDEFSAFPYLEELELNENIVSIIEPGAFNGLFNLRSLGLRSNRLKL 119
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 422
L T L+ LT LD+ +I ++ NL+SLE+ L + + L+SL
Sbjct: 120 IPLGVFTGLSNLTQLDISENKIVILLDDMFQDLYNLKSLEVGDNDLVYISHRAFRGLNSL 179
Query: 423 TLLNLSQNCNLTDKTLELISGI 444
L L + CNLT E +S +
Sbjct: 180 EELTL-EKCNLTSVPTEALSHL 200
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 82/217 (37%), Gaps = 54/217 (24%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC---TRIHGGLVNLKGL--MK 156
+ L NL SL N+ + +AF GL +L +L LE+C + L +L GL +K
Sbjct: 149 FQDLYNLKSLEVGDNDLVYI-SHRAFRGLNSLEELTLEKCNLTSVPTEALSHLHGLITLK 207
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLK---------------------SLQISCSKVTDS 195
L LNI N I D K L L NL+ SL I+ S ++
Sbjct: 208 LRYLNI---NVIRDYSFKRLYRLKNLEIAHWPYLDTMTSNGLYGLNLTSLSITHSNLSSI 264
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAAC------------------------LDSLSALGSLF 231
++ L L LNL P+TA + L L
Sbjct: 265 PYVAIRHLVYLRFLNLSYNPITAVEGSMLYELLRLQEFHLVGGQLSVVEPYAFRGLNHLK 324
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
LN++ LS F +G+L+ L L N + +C
Sbjct: 325 VLNVSSNYLSTLEESSFHSVGNLETLILDKNPLACDC 361
>sp|Q9UKC9|FBXL2_HUMAN F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3
Length = 423
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 142/354 (40%), Gaps = 86/354 (24%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C +I+D L R S L L +IT +K +
Sbjct: 101 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGIS-------- 152
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LN+ WC+ IT ++ L G LK+L +
Sbjct: 153 ---------------EGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLED 197
Query: 188 -------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSA 226
SCS++TD G+ + +G +L L L GC +T A SL+A
Sbjct: 198 EALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDA---SLTA 254
Query: 227 LGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
LG LN R Q+ + C + + GF + C LE ++L+
Sbjct: 255 LG----LNCPRLQILEAARCSHLT--------DAGFTLLARNC-------HELEKMDLEE 295
Query: 286 CG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS----GLTNLESINL-SFTGIS 337
C I D L+ L+ C L+ L LS + + G+ HLS G L + L + I+
Sbjct: 296 CILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLIT 355
Query: 338 DGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
D +L L L+ L L D +Q+T G+ + + + + A +T A
Sbjct: 356 DVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPTAV 409
Score = 35.8 bits (81), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 69 VTDSGLIHLKDCS----NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G++HL + + L+ L+ + C+ I+D LEHL L L +T G+
Sbjct: 325 ITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGI 384
Query: 125 KAFAGLINLVKL 136
K + VK+
Sbjct: 385 KRMRAQLPHVKV 396
>sp|Q5MJ12|FXL16_RAT F-box/LRR-repeat protein 16 OS=Rattus norvegicus GN=Fbxl16 PE=2
SV=1
Length = 479
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 35/231 (15%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
+ D ++V+ Q ++ ++LSG +D T++GL + + SL + CI ++D + +
Sbjct: 205 ITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWSSLS-ARITSLSVSDCINVADDAIAAI 263
Query: 103 RGL-SNLTSLSFRRNNA--------------------------ITAQGM-KAFAGLINLV 134
L NL LS + + IT G+ L NL
Sbjct: 264 SQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLT 323
Query: 135 KLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQI-SCS 190
L L C+++ V L + L KL SL++ WC ITD ++ ++ L L+ L + C
Sbjct: 324 SLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCV 383
Query: 191 KVTDSGIAYLKGLQKLTLLNLEG-CPVTAACLDSLSALGSLFYLNLNRCQL 240
++TD+G++YL + L L L C V L L A+ SL L+L C L
Sbjct: 384 RITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLAMRSLRLLSLAGCPL 434
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 130/272 (47%), Gaps = 44/272 (16%)
Query: 182 LKSLQISCSKVTDSGI-AYLKGLQKLTLLNLEGCP--VTAACLDSLSALGSLFYLNLNRC 238
+K++ + S +TD+G+ L+ +Q + L L GC A SLSA + L+++ C
Sbjct: 195 VKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWSSLSA--RITSLSVSDC 252
Query: 239 -QLSDDGCEKFSKI-GSLKVLNLGFNEITDECLVHLKGLT--NLESLNLDSCG-IGDEGL 293
++DD S++ +L L+L +TD L + + +L L SC I + G+
Sbjct: 253 INVADDAIAAISQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGV 312
Query: 294 VNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINLSF-TGISDGSLRKLA-GLS 348
VN+ L NL L LS ++V G+ ++ L L S++LS+ I+D +L +A L
Sbjct: 313 VNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLH 372
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI---CG 405
L+ L LD RITD+G +YL +LRSL + C
Sbjct: 373 RLEELVLDR-----------------------CVRITDTGLSYLSTMSSLRSLYLRWCC- 408
Query: 406 GGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKT 437
+ D G+KH+ + SL LL+L+ C L T
Sbjct: 409 -QVQDFGLKHLLAMRSLRLLSLA-GCPLLTTT 438
Score = 40.0 bits (92), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD+GL +L S+L+SL +C Q+ D GL+HL + +L LS +T G+
Sbjct: 385 ITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLAMRSLRLLSLAGCPLLTTTGL 440
>sp|P51885|LUM_MOUSE Lumican OS=Mus musculus GN=Lum PE=1 SV=2
Length = 338
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 11/145 (7%)
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD-EGLVNLTGLCNLKCLE 306
FSK+ LK L++ +N +T+ K L +L+ N +G +GLVNLT + L+ +
Sbjct: 112 FSKLKQLKKLHINYNNLTESVGPLPKSLQDLQLTNNKISKLGSFDGLVNLTFIY-LQHNQ 170
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL-SSLKSLNLDARQITDTGL 365
L + V +S L GL +LE ++LSF +S + AGL +SL +L LD +I++
Sbjct: 171 LKEDAVSAS----LKGLKSLEYLDLSFNQMS----KLPAGLPTSLLTLYLDNNKISNIPD 222
Query: 366 AALTSLTGLTHLDLFGARITDSGAA 390
TGL +L L + DSG
Sbjct: 223 EYFKRFTGLQYLRLSHNELADSGVP 247
>sp|Q9Z1P4|LGR5_MOUSE Leucine-rich repeat-containing G-protein coupled receptor 5 OS=Mus
musculus GN=Lgr5 PE=2 SV=2
Length = 907
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 132/330 (40%), Gaps = 30/330 (9%)
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
NA+T AF GL +L L L+ L+ L L+SL + N I+
Sbjct: 100 NALTHIPKGAFTGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLD-ANHISYVPPSCF 158
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
SGL +L+ L + + +TD + + L L + L + + L SL L+L+
Sbjct: 159 SGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLHLH 218
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
++ G + F + SL+ L+L +N + DE +K L+NL+ L S I
Sbjct: 219 NNRIHSLGKKCFDGLHSLETLDLNYNNL-DEFPTAIKTLSNLKELGFHSNNIRSIPERAF 277
Query: 297 TGLCNLKCLELSDTQ---VGSSGLRHL--------------------SGLTNLESINLSF 333
G +L + D VG S +HL +G LES+ L+
Sbjct: 278 VGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGASHITEFPHLTGTATLESLTLTG 337
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
IS L +L+ L+L + D L +L+ L +DL I + + +
Sbjct: 338 AKISSLPQAVCDQLPNLQVLDLSYNLLED--LPSLSGCQKLQKIDLRHNEIYEIKGSTFQ 395
Query: 394 NFKNLRSLEICGGGLTDAGVKHIKDLSSLT 423
NLRSL + + + H S+L
Sbjct: 396 QLFNLRSLNLAWNKI---AIIHPNAFSTLP 422
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 4/266 (1%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N +T +GL +LK L + +++ L+ L+ L L L+ ++ S
Sbjct: 100 NALTHIPKGAFTGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFS 159
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
L SL +L L+ L+D + F + +L+ + L N+I L++L L+L +
Sbjct: 160 GLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLHLHN 219
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
I G GL +L+ L+L+ + + L+NL+ + I R
Sbjct: 220 NRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTA-IKTLSNLKELGFHSNNIRSIPERAFV 278
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEIC 404
G SL +++ I G++A L L L L GA IT+ +L L SL +
Sbjct: 279 GNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGASHITE--FPHLTGTATLESLTLT 336
Query: 405 GGGLTDAGVKHIKDLSSLTLLNLSQN 430
G ++ L +L +L+LS N
Sbjct: 337 GAKISSLPQAVCDQLPNLQVLDLSYN 362
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 123/333 (36%), Gaps = 56/333 (16%)
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLK 152
++D ++ R LS L +++ N I AF L +LV L L RIH G
Sbjct: 174 LTDVPVQAFRSLSALQAMTLALNK-IHHIADYAFGNLSSLVVLHLHN-NRIHSLGKKCFD 231
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
GL LE+L++ + N D + L+NLK L + + G L ++
Sbjct: 232 GLHSLETLDLNYNN--LDEFPTAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFY 289
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVH 271
P+ G F + L+ L L G + IT+ H
Sbjct: 290 DNPIQFV------------------------GVSAFQHLPELRTLTLNGASHITE--FPH 323
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
L G LESL L I L NL+ L+LS + L LSG L+ I+L
Sbjct: 324 LTGTATLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYNLL--EDLPSLSGCQKLQKIDL 381
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT------------------- 372
I + L +L+SLNL +I A ++L
Sbjct: 382 RHNEIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVTG 441
Query: 373 --GLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
GLTHL L G R S NF L+ +E+
Sbjct: 442 LHGLTHLKLTGNRALQSLIPS-ANFPELKIIEM 473
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 72/174 (41%)
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
L+L N I+ L L LE L L + TGL +LK L L + Q+
Sbjct: 71 LDLSMNNISQLPASLLHRLCFLEELRLAGNALTHIPKGAFTGLHSLKVLMLQNNQLRQVP 130
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
L L +L+S+ L IS +GL SL+ L LD +TD + A SL+ L
Sbjct: 131 EEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQA 190
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQN 430
+ L +I N +L L + + G K L SL L+L+ N
Sbjct: 191 MTLALNKIHHIADYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYN 244
>sp|Q8WXD0|RXFP2_HUMAN Relaxin receptor 2 OS=Homo sapiens GN=RXFP2 PE=1 SV=1
Length = 754
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 94/236 (39%), Gaps = 24/236 (10%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
NCI K GL NL+ L ++ + +T K L +LT L L+ P+T +
Sbjct: 171 NCIRHISRKAFFGLCNLQILYLNHNCITTLRPGIFKDLHQLTWLILDDNPITRISQRLFT 230
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
L SLF+L++ L + +++ L ++L N I K LTN L+ DS
Sbjct: 231 GLNSLFFLSMVNNYLEALPKQMCAQMPQLNWVDLEGNRI--------KYLTNSTFLSCDS 282
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
L L L Q+G + S L NL ++LS I++ S
Sbjct: 283 ----------------LTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNTITELSPHLFK 326
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSL 401
L L+ LNL + + SL L LDL I + + KNL +
Sbjct: 327 DLKLLQKLNLSSNPLMYLHKNQFESLKQLQSLDLERIEIPNINTRMFQPMKNLSHI 382
>sp|Q708Y0|EBF2_ARATH EIN3-binding F-box protein 2 OS=Arabidopsis thaliana GN=EBF2 PE=1
SV=1
Length = 623
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 202/457 (44%), Gaps = 80/457 (17%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHL-KDCSNLQSLDFN 89
+L+ + L P V+D + IA + +DLS +TDSGL+ + ++C NL L +
Sbjct: 168 SLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNLSDLTID 227
Query: 90 FCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMK---AFAG-LINLVKLDLERCTRI 144
C + + GL + R NL S+S R I QG+ A AG + VKL + + +
Sbjct: 228 SCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSYLTKVKLQMLNVSGL 287
Query: 145 -------HGGLV--------------------NLKGLMKLESLNIKWCNCITDSDMKPL- 176
+G V N KGL KL+SL++ C +TD ++ +
Sbjct: 288 SLAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVGLEAVG 347
Query: 177 SGLTNLKSLQIS-CSKVTDSG-IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
+G +LK + ++ C V+ G +A K L L LE C ++ +G F +N
Sbjct: 348 NGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEECHR----INQFGLMG--FLMN 401
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLN-LGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEG 292
SK+ + + N LG ++ E + ++L SL++ C G GD
Sbjct: 402 CG------------SKLKAFSLANCLGISDFNSESSLPSPSCSSLRSLSIRCCPGFGDAS 449
Query: 293 LVNLTGLCNLKCLELSDTQ------VGSSGLRHL--SGLTNLESINLS-FTGISDGSLRK 343
L L C+ +L D + V +G+R L S L +NLS +SD ++
Sbjct: 450 LAFLGKFCH----QLQDVELCGLNGVTDAGVRELLQSNNVGLVKVNLSECINVSDNTVSA 505
Query: 344 LAGL--SSLKSLNLDA-RQITDTGLAALT-SLTGLTHLDLFGARITDSGAAYL---RNFK 396
++ +L+SLNLD + IT+ L A+ + + LD+ ++D G L N
Sbjct: 506 ISVCHGRTLESLNLDGCKNITNASLVAVAKNCYSVNDLDISNTLVSDHGIKALASSPNHL 565
Query: 397 NLRSLEICG-GGLTDAGVKHIKDLSSLTLLNLS-QNC 431
NL+ L I G +TD I+ L TLL L+ Q C
Sbjct: 566 NLQVLSIGGCSSITDKSKACIQKLGR-TLLGLNIQRC 601
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 177/424 (41%), Gaps = 60/424 (14%)
Query: 55 QGSSLLSVDLSGSDVTDSGLIHLK-------DCSNLQSLDFNFCIQISDGGLEHL-RGLS 106
+G LS L G TD L + LQ F +++D GL + G
Sbjct: 108 EGEGFLSRSLEGKKATDLRLAAIAVGTSSRGGLGKLQIRGSGFESKVTDVGLGAVAHGCP 167
Query: 107 NLTSLSFRRNNAITAQGMKAFAGLINLV-KLDLERCTRI-HGGLVNL-KGLMKLESLNIK 163
+L +S A++ G+ A ++ KLDL RC I GLV + + + L L I
Sbjct: 168 SLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNLSDLTID 227
Query: 164 WCNCITDSDMKPLSG-LTNLKSLQI-SCSKVTDSGIAYL--KGLQKLTLLNLEGCPVTAA 219
C+ + + ++ ++ NL+S+ I SC ++ D G+A+L + LT + L+ V+
Sbjct: 228 SCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSYLTKVKLQMLNVSGL 287
Query: 220 CLDSLSALGSLFY-LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
L + G+ L L+ Q G NE + + KGL L
Sbjct: 288 SLAVIGHYGAAVTDLVLHGLQ--------------------GVNEKGFWVMGNAKGLKKL 327
Query: 279 ESLNLDSC-GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGIS 337
+SL++ SC G+ D GL + C +L + L GL L LS +
Sbjct: 328 KSLSVMSCRGMTDVGLEAVGN----GCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLK 383
Query: 338 DGSLRKLAGL----------SSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGAR--- 383
++ S LK+ +L + I+D + + L R
Sbjct: 384 LEECHRINQFGLMGFLMNCGSKLKAFSLANCLGISDFNSESSLPSPSCSSLRSLSIRCCP 443
Query: 384 -ITDSGAAYLRNF-KNLRSLEICG-GGLTDAGVKHIKDLSSLTLL--NLSQNCNLTDKTL 438
D+ A+L F L+ +E+CG G+TDAGV+ + +++ L+ NLS+ N++D T+
Sbjct: 444 GFGDASLAFLGKFCHQLQDVELCGLNGVTDAGVRELLQSNNVGLVKVNLSECINVSDNTV 503
Query: 439 ELIS 442
IS
Sbjct: 504 SAIS 507
>sp|Q50L44|LIGO1_CHICK Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Gallus gallus
GN=LINGO1 PE=2 SV=1
Length = 613
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 113/272 (41%), Gaps = 19/272 (6%)
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N I+A AF L NL L L R I G+ GL L L+I + D
Sbjct: 98 NIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGV--FTGLSNLTKLDISENKIVILLDYM 155
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L NLKSL++ + + GL L L LE C +T+ ++LS L L L
Sbjct: 156 -FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 214
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L ++ F ++ LKVL + + +T CL L NL SL++ C +
Sbjct: 215 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGL----NLTSLSITHCNLTS 270
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL---SFTGISDGSLRKLAGL 347
V++ L L+ L LS + + L L L+ I L T + + R GL
Sbjct: 271 IPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFR---GL 327
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
+ L+ LN+ +T +A S+ L L L
Sbjct: 328 NYLRILNVSGNLLTTLEESAFHSVGNLETLIL 359
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 6/186 (3%)
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC---GIGDEGLVNLTGLCNLKC 304
F + +LK L +G N++ GL +LE L L+ C I E L +L GL L+
Sbjct: 156 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 215
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 364
L+ + + L L LE + + + L GL+ L SL++ +T
Sbjct: 216 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNC--LYGLN-LTSLSITHCNLTSIP 272
Query: 365 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTL 424
++ L L L+L I + L + L+ +++ GG LT + L+ L +
Sbjct: 273 YVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRI 332
Query: 425 LNLSQN 430
LN+S N
Sbjct: 333 LNVSGN 338
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 93/226 (41%), Gaps = 24/226 (10%)
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L+L + ++ ++F+ L+ L L N I+ L NL +L L S +
Sbjct: 69 LDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIP 128
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
L TGL NL L++S+ ++ L NL+S+ + + S R +GL+SL+
Sbjct: 129 LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQ 188
Query: 353 LNLDARQITDTGLAALTSLTGLT-----HLDLFGAR------------ITDSGAAYLRNF 395
L L+ +T AL+ L GL HL++ R + S YL
Sbjct: 189 LTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTM 248
Query: 396 K-------NLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLT 434
NL SL I LT ++ L L LNLS N +T
Sbjct: 249 TSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVT 294
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
+ L+L ++ + + +LE + L+ IS L +L++L L + ++
Sbjct: 67 RQLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKL 126
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 422
L T L+ LT LD+ +I ++ NL+SLE+ L + L+SL
Sbjct: 127 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 186
Query: 423 TLLNLSQNCNLTDKTLELISGI 444
L L + CNLT E +S +
Sbjct: 187 EQLTL-EKCNLTSIPTEALSHL 207
>sp|P34284|YKK7_CAEEL Uncharacterized F-box/LRR-repeat protein C02F5.7 OS=Caenorhabditis
elegans GN=C02F5.7 PE=4 SV=3
Length = 466
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 156/365 (42%), Gaps = 64/365 (17%)
Query: 56 GSSLLSVDLSG-SDVTDSGL-IHLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLS 112
G L + L G +V DS L C NL+ L C +++D E+L R L L+
Sbjct: 122 GGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKLNYLN 181
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
++IT + MK G L LNI WC+ I D
Sbjct: 182 LENCSSITDRAMKYIGD-----------------------GCPNLSYLNISWCDAIQDRG 218
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSA-LGSL 230
++ + L+N KSL L L GC +T S+ A +G++
Sbjct: 219 VQII--LSNCKSLDT---------------------LILRGCEGLTENVFGSVEAHMGAI 255
Query: 231 FYLNLNRC-QLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHL-KGLTNLESLNLDSC 286
LNL +C QL+D + + +L+ L + N+I+D LV L + NL+ L L C
Sbjct: 256 KKLNLLQCFQLTDITVQNIANGATALEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGC 315
Query: 287 G-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFTG-ISDGSL 341
+GD G + L C L+ L++ D + + L+ T L ++LS I+D S+
Sbjct: 316 TLLGDNGFIPLARGCRQLERLDMEDCSLISDHTINSLANNCTALRELSLSHCELITDESI 375
Query: 342 RKLAG--LSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
+ LA +L L LD Q+TD+ L+ L L +DL+ + S A +R +
Sbjct: 376 QNLASKHRETLNVLELDNCPQLTDSTLSHLRHCKALKRIDLYDCQNV-SKEAIVRFQHHR 434
Query: 399 RSLEI 403
++EI
Sbjct: 435 PNIEI 439
>sp|Q96FE5|LIGO1_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Homo sapiens GN=LINGO1
PE=1 SV=2
Length = 620
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 13/251 (5%)
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N ++A AF L NL L L R I G+ GL L L+I + D
Sbjct: 105 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGV--FTGLSNLTKLDISENKIVILLDYM 162
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L NLKSL++ + + GL L L LE C +T+ ++LS L L L
Sbjct: 163 -FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 221
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L ++ F ++ LKVL + + +T CL L NL SL++ C +
Sbjct: 222 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL----NLTSLSITHCNLTA 277
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ + L L+ L LS + + L L L+ I L ++ GL+ L
Sbjct: 278 VPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYL 337
Query: 351 KSLNLDARQIT 361
+ LN+ Q+T
Sbjct: 338 RVLNVSGNQLT 348
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 100/257 (38%), Gaps = 48/257 (18%)
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
D ++ L L LN +S F+ + +L+ L L N + L GL+NL L
Sbjct: 89 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKL 148
Query: 282 -------------------NLDSCGIGDEGLVNLT-----GLCNLKCLELSD---TQVGS 314
NL S +GD LV ++ GL +L+ L L T + +
Sbjct: 149 DISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 208
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK----------------SLNLDAR 358
L HL GL L +L+ I D S ++L L L+ LNL +
Sbjct: 209 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSL 268
Query: 359 QITDTGLAALT-----SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGV 413
IT L A+ L L L+L I+ + L L+ +++ GG L
Sbjct: 269 SITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEP 328
Query: 414 KHIKDLSSLTLLNLSQN 430
+ L+ L +LN+S N
Sbjct: 329 YAFRGLNYLRVLNVSGN 345
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L+L + ++ ++F+ L+ L L N ++ L NL +L L S +
Sbjct: 76 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 135
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
L TGL NL L++S+ ++ L NL+S+ + + S R +GL+SL+
Sbjct: 136 LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQ 195
Query: 353 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 412
L L+ +T AL+ L GL L L I + L+ LEI D
Sbjct: 196 LTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTM 255
Query: 413 VKHIKDLSSLTLLNLS-QNCNLT 434
+ L L L +LS +CNLT
Sbjct: 256 TPNC--LYGLNLTSLSITHCNLT 276
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
+ L+L ++ + + +LE + L+ +S L +L++L L + ++
Sbjct: 74 RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL 133
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 422
L T L+ LT LD+ +I ++ NL+SLE+ L + L+SL
Sbjct: 134 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 193
Query: 423 TLLNLSQNCNLTDKTLELISGI 444
L L + CNLT E +S +
Sbjct: 194 EQLTL-EKCNLTSIPTEALSHL 214
>sp|Q9SCT4|IMK2_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase
IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1
Length = 836
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 117/267 (43%), Gaps = 1/267 (0%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N I S + L L +L+ + + ++++ S L L L+L +T A SL+
Sbjct: 128 NVIAGSVPRSLGYLKSLRGVYLFNNRLSGSIPVSLGNCPLLQNLDLSSNQLTGAIPPSLT 187
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLESLNLD 284
L+ LNL+ LS ++ +L L+L N ++ + G L++LNLD
Sbjct: 188 ESTRLYRLNLSFNSLSGPLPVSVARSYTLTFLDLQHNNLSGSIPDFFVNGSHPLKTLNLD 247
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL 344
V+L L+ + +S Q+ S R GL +L+S++ S+ I+
Sbjct: 248 HNRFSGAVPVSLCKHSLLEEVSISHNQLSGSIPRECGGLPHLQSLDFSYNSINGTIPDSF 307
Query: 345 AGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
+ LSSL SLNL++ + A+ L LT L+L +I + N ++ L++
Sbjct: 308 SNLSSLVSLNLESNHLKGPIPDAIDRLHNLTELNLKRNKINGPIPETIGNISGIKKLDLS 367
Query: 405 GGGLTDAGVKHIKDLSSLTLLNLSQNC 431
T + L+ L+ N+S N
Sbjct: 368 ENNFTGPIPLSLVHLAKLSSFNVSYNT 394
>sp|Q8IY22|CMIP_HUMAN C-Maf-inducing protein OS=Homo sapiens GN=CMIP PE=1 SV=3
Length = 773
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT-GLCNLKCLELSD 309
G+L+ L+L F +T C HL L +L+ LNL S GD GL L+ L L+ L L +
Sbjct: 661 FGNLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCE 720
Query: 310 TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL-AGLSSLKSLNL 355
T V +GL LS + +L S+N++ T +S + L A L +LK +++
Sbjct: 721 TPVTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDV 767
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS-LTGLTHLDLFGAR 383
NLE+++L+FT ++ L L SLK LNL + Q D GL L+ LT L L+L
Sbjct: 663 NLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCETP 722
Query: 384 ITDSGAAYLRNFKNLRSLEI 403
+TD+G L + K+L SL +
Sbjct: 723 VTDAGLLALSSMKSLCSLNM 742
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLDARQ 359
NL+ L L+ T V S+ HL L +L+ +NL T D LR L+ L+ L+ LNL
Sbjct: 663 NLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCETP 722
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR-NFKNLRSLEI 403
+TD GL AL+S+ L L++ +++ L+ NL+ +++
Sbjct: 723 VTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDV 767
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL-KGLQKLTLLNLEGCP 215
LE+L++ + N +T + + L L +LK L + ++ D+G+ L + L L +LNL P
Sbjct: 664 LENLSLAFTN-VTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCETP 722
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF-SKIGSLKVLNLGFNE 263
VT A L +LS++ SL LN+N +LS D E +K+ +LK +++ + E
Sbjct: 723 VTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDVRYTE 771
Score = 36.6 bits (83), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-KGLTNLESLNLD 284
+ G+L L+L ++ E K+ SLK LNL + D L L + LT L+ LNL
Sbjct: 660 SFGNLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLC 719
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG-LTNLESINLSFT 334
+ D GL+ L+ + +L L ++ T++ + L L NL+ +++ +T
Sbjct: 720 ETPVTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDVRYT 770
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,434,704
Number of Sequences: 539616
Number of extensions: 6074727
Number of successful extensions: 17861
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 270
Number of HSP's successfully gapped in prelim test: 468
Number of HSP's that attempted gapping in prelim test: 14222
Number of HSP's gapped (non-prelim): 2486
length of query: 448
length of database: 191,569,459
effective HSP length: 121
effective length of query: 327
effective length of database: 126,275,923
effective search space: 41292226821
effective search space used: 41292226821
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)