Query 013175
Match_columns 448
No_of_seqs 289 out of 2504
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 01:09:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013175.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013175hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1574 Predicted metal-depend 100.0 1.4E-80 3E-85 620.2 45.4 434 4-448 95-533 (535)
2 cd01300 YtcJ_like YtcJ_like me 100.0 2.8E-69 6E-74 550.9 44.7 408 2-419 67-479 (479)
3 PF07969 Amidohydro_3: Amidohy 100.0 2.4E-51 5.1E-56 411.1 8.4 345 20-419 46-404 (404)
4 PRK08204 hypothetical protein; 100.0 1.1E-27 2.5E-32 242.7 27.4 201 231-448 197-417 (449)
5 PRK09229 N-formimino-L-glutama 100.0 1.8E-27 3.8E-32 241.1 28.1 201 231-448 212-432 (456)
6 cd01298 ATZ_TRZ_like TRZ/ATZ f 100.0 2.4E-27 5.2E-32 238.0 28.7 288 108-448 93-406 (411)
7 PRK09045 N-ethylammeline chlor 100.0 2.3E-27 5.1E-32 239.5 27.0 289 108-448 104-415 (443)
8 PRK07228 N-ethylammeline chlor 100.0 8.4E-27 1.8E-31 236.0 30.1 198 231-448 195-414 (445)
9 PRK06151 N-ethylammeline chlor 100.0 3.5E-27 7.5E-32 240.6 26.9 198 231-448 217-438 (488)
10 PRK06687 chlorohydrolase; Vali 100.0 5.5E-27 1.2E-31 235.4 27.2 290 107-448 94-410 (419)
11 PRK08203 hydroxydechloroatrazi 100.0 1.7E-26 3.8E-31 233.9 28.4 292 107-448 96-424 (451)
12 PRK12393 amidohydrolase; Provi 100.0 1.7E-26 3.6E-31 233.7 27.1 302 107-448 97-429 (457)
13 cd01299 Met_dep_hydrolase_A Me 100.0 1.8E-26 3.9E-31 225.9 25.7 266 110-429 36-340 (342)
14 cd01313 Met_dep_hydrolase_E Me 100.0 4.5E-26 9.8E-31 228.1 27.9 197 231-444 203-418 (418)
15 PRK06038 N-ethylammeline chlor 100.0 6.7E-26 1.5E-30 227.8 29.2 290 106-448 90-401 (430)
16 PRK09228 guanine deaminase; Pr 99.9 9.9E-26 2.1E-30 226.3 28.5 198 231-448 207-431 (433)
17 cd01303 GDEase Guanine deamina 99.9 1E-25 2.2E-30 226.4 26.9 199 231-443 204-429 (429)
18 PRK15493 5-methylthioadenosine 99.9 2E-25 4.3E-30 224.4 28.4 288 107-448 95-410 (435)
19 PRK06380 metal-dependent hydro 99.9 1.9E-25 4.2E-30 224.2 27.2 285 104-448 86-400 (418)
20 TIGR02967 guan_deamin guanine 99.9 2.4E-25 5.3E-30 222.4 27.2 193 231-443 182-401 (401)
21 TIGR02022 hutF formiminoglutam 99.9 2E-25 4.3E-30 225.5 26.7 201 231-448 212-432 (455)
22 PRK09356 imidazolonepropionase 99.9 2.3E-25 5E-30 223.1 25.3 188 231-448 218-406 (406)
23 PRK07203 putative chlorohydrol 99.9 1.6E-24 3.4E-29 218.9 31.2 301 103-448 95-415 (442)
24 PLN02942 dihydropyrimidinase 99.9 5E-26 1.1E-30 231.6 19.8 301 115-448 76-442 (486)
25 cd01312 Met_dep_hydrolase_D Me 99.9 1.3E-24 2.8E-29 214.3 27.8 274 108-444 67-381 (381)
26 cd01318 DHOase_IIb Dihydroorot 99.9 4E-26 8.8E-31 223.2 15.8 289 114-443 22-361 (361)
27 TIGR03314 Se_ssnA putative sel 99.9 6.6E-24 1.4E-28 213.8 31.8 293 104-448 95-414 (441)
28 PRK07627 dihydroorotase; Provi 99.9 2.4E-25 5.1E-30 222.3 19.6 296 114-448 71-423 (425)
29 PRK08393 N-ethylammeline chlor 99.9 6.4E-24 1.4E-28 213.2 28.4 290 107-447 90-399 (424)
30 PRK08418 chlorohydrolase; Prov 99.9 5.1E-24 1.1E-28 212.2 26.9 278 108-447 94-408 (408)
31 TIGR01224 hutI imidazoloneprop 99.9 1.5E-24 3.3E-29 215.0 22.7 277 107-445 86-377 (377)
32 COG0044 PyrC Dihydroorotase an 99.9 7.1E-25 1.5E-29 216.3 19.5 306 105-448 61-421 (430)
33 PRK07213 chlorohydrolase; Prov 99.9 1.1E-23 2.4E-28 208.0 28.0 270 107-445 89-375 (375)
34 PRK08044 allantoinase; Provisi 99.9 2.8E-24 6.1E-29 216.5 22.0 328 92-448 48-434 (449)
35 cd01296 Imidazolone-5PH Imidaz 99.9 1.7E-23 3.6E-28 207.2 27.0 274 107-443 83-371 (371)
36 cd01314 D-HYD D-hydantoinases 99.9 1.8E-24 3.9E-29 219.2 20.1 301 116-448 71-436 (447)
37 TIGR02033 D-hydantoinase D-hyd 99.9 3.3E-24 7.1E-29 218.0 20.2 295 116-448 71-438 (454)
38 PRK09357 pyrC dihydroorotase; 99.9 1.6E-23 3.4E-28 210.8 23.7 293 115-448 70-422 (423)
39 PRK13404 dihydropyrimidinase; 99.9 8.6E-24 1.9E-28 214.4 19.9 301 115-448 74-445 (477)
40 PRK07572 cytosine deaminase; V 99.9 3.9E-23 8.5E-28 207.5 23.3 311 91-448 74-402 (426)
41 PRK06189 allantoinase; Provisi 99.9 9.8E-23 2.1E-27 206.0 26.3 300 114-448 70-432 (451)
42 TIGR03178 allantoinase allanto 99.9 5.3E-23 1.1E-27 207.8 23.1 298 115-448 68-429 (443)
43 cd01293 Bact_CD Bacterial cyto 99.9 8E-23 1.7E-27 204.4 23.5 196 231-446 185-398 (398)
44 PRK08323 phenylhydantoinase; V 99.9 1.7E-22 3.7E-27 205.6 26.1 296 115-448 68-436 (459)
45 PRK09059 dihydroorotase; Valid 99.9 1E-22 2.2E-27 203.6 23.2 292 113-448 75-428 (429)
46 PRK08417 dihydroorotase; Provi 99.9 1.3E-23 2.7E-28 208.0 15.3 208 232-448 127-386 (386)
47 PRK13309 ureC urease subunit a 99.9 2E-22 4.4E-27 202.5 23.9 196 233-448 230-461 (572)
48 PRK07583 cytosine deaminase-li 99.9 5.5E-22 1.2E-26 199.9 26.5 292 108-447 114-422 (438)
49 PRK09230 cytosine deaminase; P 99.9 3.8E-22 8.3E-27 199.7 24.9 298 107-448 93-406 (426)
50 cd01315 L-HYD_ALN L-Hydantoina 99.9 2.1E-22 4.5E-27 204.2 22.4 293 115-448 69-433 (447)
51 cd01302 Cyclic_amidohydrolases 99.9 3.3E-22 7.2E-27 194.4 21.7 285 114-446 22-330 (337)
52 TIGR00857 pyrC_multi dihydroor 99.9 1E-21 2.3E-26 196.2 24.7 301 115-448 56-410 (411)
53 PLN02795 allantoinase 99.9 2.7E-22 5.9E-27 204.3 20.1 298 115-448 116-489 (505)
54 PRK05985 cytosine deaminase; P 99.9 1.2E-21 2.7E-26 194.9 24.4 282 108-448 90-389 (391)
55 TIGR02318 phosphono_phnM phosp 99.9 8.7E-22 1.9E-26 193.6 22.9 280 114-447 72-376 (376)
56 PRK14085 imidazolonepropionase 99.9 9.8E-22 2.1E-26 194.8 22.7 250 107-426 104-366 (382)
57 COG1228 HutI Imidazolonepropio 99.9 2E-22 4.3E-27 198.1 17.5 184 228-448 213-402 (406)
58 PRK02382 dihydroorotase; Provi 99.9 3E-21 6.4E-26 194.8 25.5 284 115-448 71-419 (443)
59 PRK07575 dihydroorotase; Provi 99.9 3.2E-21 6.9E-26 194.0 25.5 290 114-447 72-420 (438)
60 PRK15446 phosphonate metabolis 99.9 1.1E-21 2.3E-26 193.6 21.5 281 115-448 77-381 (383)
61 PRK13206 ureC urease subunit a 99.9 2.7E-21 5.8E-26 193.5 23.4 272 123-448 151-462 (573)
62 PRK00369 pyrC dihydroorotase; 99.9 2.7E-21 5.9E-26 190.3 23.1 274 113-447 62-372 (392)
63 PRK09236 dihydroorotase; Revie 99.9 6.3E-21 1.4E-25 192.5 25.3 294 115-448 71-427 (444)
64 PRK01211 dihydroorotase; Provi 99.9 3.5E-22 7.6E-27 197.6 14.3 282 113-447 61-389 (409)
65 COG0402 SsnA Cytosine deaminas 99.9 4.2E-21 9.1E-26 192.6 22.0 199 231-447 194-408 (421)
66 PRK09060 dihydroorotase; Valid 99.9 1E-20 2.2E-25 190.5 24.5 292 114-447 72-422 (444)
67 PRK13207 ureC urease subunit a 99.9 4.5E-21 9.9E-26 192.4 21.0 198 233-448 226-457 (568)
68 cd01297 D-aminoacylase D-amino 99.9 1.2E-20 2.5E-25 189.0 23.4 186 232-448 196-404 (415)
69 PRK04250 dihydroorotase; Provi 99.9 1.1E-20 2.5E-25 187.0 18.7 283 114-448 63-385 (398)
70 PRK07369 dihydroorotase; Provi 99.9 1.3E-21 2.7E-26 195.0 11.9 271 114-424 73-386 (418)
71 cd01309 Met_dep_hydrolase_C Me 99.8 2.8E-20 6.2E-25 182.4 17.9 177 236-447 181-359 (359)
72 KOG3968 Atrazine chlorohydrola 99.8 3.1E-20 6.7E-25 174.8 17.1 200 232-448 217-438 (439)
73 cd01317 DHOase_IIa Dihydroorot 99.8 1.3E-19 2.7E-24 179.2 21.5 288 114-446 30-367 (374)
74 KOG2584 Dihydroorotase and rel 99.8 1.1E-20 2.4E-25 177.0 11.3 305 115-448 85-454 (522)
75 cd01306 PhnM PhnM is believed 99.8 1.9E-18 4E-23 164.9 21.6 277 115-443 27-325 (325)
76 PRK12394 putative metallo-depe 99.8 3.3E-18 7.1E-23 169.4 24.1 182 232-448 170-375 (379)
77 PRK06846 putative deaminase; V 99.8 3.4E-18 7.4E-23 171.1 23.3 188 232-448 203-405 (410)
78 cd01295 AdeC Adenine deaminase 99.8 4.1E-18 9E-23 170.8 20.7 252 122-448 29-291 (422)
79 PRK13985 ureB urease subunit b 99.8 8.9E-18 1.9E-22 166.9 22.3 199 232-448 225-457 (568)
80 PRK06886 hypothetical protein; 99.8 4.1E-17 8.9E-22 156.2 22.3 268 90-403 44-328 (329)
81 cd01316 CAD_DHOase The eukaryo 99.8 1.1E-16 2.4E-21 155.1 23.5 274 113-447 21-332 (344)
82 cd00375 Urease_alpha Urease al 99.8 1.7E-16 3.7E-21 158.4 24.5 196 233-448 226-457 (567)
83 TIGR01792 urease_alph urease, 99.7 7.4E-17 1.6E-21 162.5 18.8 194 232-447 224-455 (567)
84 PRK09061 D-glutamate deacylase 99.7 3.5E-16 7.6E-21 159.8 22.2 215 232-448 196-490 (509)
85 cd01294 DHOase Dihydroorotase 99.7 2.4E-16 5.2E-21 153.5 19.1 257 116-413 17-308 (335)
86 PRK13308 ureC urease subunit a 99.7 5.6E-16 1.2E-20 154.8 20.2 198 233-448 226-458 (569)
87 cd01305 archeal_chlorohydrolas 99.7 4.6E-16 1E-20 146.4 18.7 220 107-399 43-263 (263)
88 TIGR01975 isoAsp_dipep isoaspa 99.7 1.9E-15 4.1E-20 148.7 22.6 176 232-447 168-377 (389)
89 PRK10657 isoaspartyl dipeptida 99.7 2.6E-15 5.7E-20 149.5 22.3 179 232-447 168-376 (388)
90 PRK09237 dihydroorotase; Provi 99.7 6.7E-15 1.5E-19 146.0 24.9 171 242-448 175-369 (380)
91 PLN02303 urease 99.7 3.1E-15 6.8E-20 154.3 23.0 104 337-448 617-726 (837)
92 TIGR01178 ade adenine deaminas 99.7 5E-15 1.1E-19 151.7 22.5 245 123-447 71-331 (552)
93 PF01979 Amidohydro_1: Amidohy 99.7 2.2E-15 4.9E-20 146.8 16.7 170 231-421 140-333 (333)
94 COG3454 Metal-dependent hydrol 99.7 4.1E-15 9E-20 135.5 16.8 287 116-447 75-377 (377)
95 cd01292 metallo-dependent_hydr 99.6 1.2E-14 2.7E-19 136.9 19.4 235 107-399 26-275 (275)
96 TIGR00856 pyrC_dimer dihydroor 99.6 7.7E-15 1.7E-19 142.2 15.7 267 116-426 17-315 (341)
97 cd01307 Met_dep_hydrolase_B Me 99.6 6.3E-13 1.4E-17 129.8 23.0 148 237-424 151-317 (338)
98 cd01320 ADA Adenosine deaminas 99.5 7.8E-13 1.7E-17 128.5 21.3 141 233-403 171-314 (325)
99 PRK05451 dihydroorotase; Provi 99.5 4.2E-13 9.1E-18 130.8 19.4 256 117-412 25-313 (345)
100 PLN02599 dihydroorotase 99.5 3.6E-13 7.8E-18 130.9 14.7 256 118-409 40-329 (364)
101 cd01308 Isoaspartyl-dipeptidas 99.5 4.8E-12 1E-16 126.1 22.1 175 232-447 166-375 (387)
102 TIGR01430 aden_deam adenosine 99.4 4.2E-11 9.2E-16 116.2 21.0 142 233-404 170-314 (324)
103 TIGR03121 one_C_dehyd_A formyl 99.4 2.7E-11 5.8E-16 121.9 18.4 68 380-448 427-499 (556)
104 cd00854 NagA N-acetylglucosami 99.4 1.9E-11 4.1E-16 120.8 17.0 52 382-443 323-374 (374)
105 PRK10027 cryptic adenine deami 99.4 1E-10 2.2E-15 120.3 22.2 170 228-448 191-366 (588)
106 PRK09358 adenosine deaminase; 99.3 4.7E-11 1E-15 116.6 18.3 142 232-403 179-323 (340)
107 cd01304 FMDH_A Formylmethanofu 99.3 5.3E-11 1.1E-15 119.2 17.9 67 380-447 424-496 (541)
108 COG3964 Predicted amidohydrola 99.3 1.7E-10 3.6E-15 104.6 17.6 151 237-423 174-339 (386)
109 COG1001 AdeC Adenine deaminase 99.3 2.9E-10 6.2E-15 113.1 20.2 164 235-447 189-358 (584)
110 COG0804 UreC Urea amidohydrola 99.3 4.9E-10 1.1E-14 105.2 19.3 271 123-447 145-456 (568)
111 TIGR03583 EF_0837 probable ami 99.2 1.3E-09 2.8E-14 107.6 20.5 172 234-446 165-364 (365)
112 PRK11170 nagA N-acetylglucosam 99.1 1.4E-08 3E-13 100.2 22.0 58 380-447 323-380 (382)
113 TIGR00221 nagA N-acetylglucosa 99.1 2.9E-08 6.2E-13 97.7 21.7 54 381-444 327-380 (380)
114 PF13147 Amidohydro_4: Amidohy 99.0 2E-09 4.3E-14 102.6 12.3 76 331-418 225-304 (304)
115 COG1820 NagA N-acetylglucosami 98.9 1.5E-09 3.3E-14 103.5 7.0 58 381-448 323-380 (380)
116 cd00443 ADA_AMPD Adenosine/AMP 98.8 2E-06 4.3E-11 82.6 21.8 140 233-403 151-294 (305)
117 PTZ00124 adenosine deaminase; 98.7 4.5E-06 9.7E-11 81.4 21.8 138 236-403 207-350 (362)
118 cd00530 PTE Phosphotriesterase 98.6 2.1E-06 4.6E-11 82.1 17.3 148 233-400 134-293 (293)
119 cd01321 ADGF Adenosine deamina 98.6 8.9E-06 1.9E-10 79.1 19.7 143 233-403 177-330 (345)
120 KOG3892 N-acetyl-glucosamine-6 98.3 6E-07 1.3E-11 80.5 4.7 57 382-448 348-404 (407)
121 PF00962 A_deaminase: Adenosin 98.2 3.1E-06 6.6E-11 82.5 7.9 240 110-403 72-321 (331)
122 COG1816 Add Adenosine deaminas 98.1 1.9E-05 4.1E-10 75.7 11.0 142 232-403 182-326 (345)
123 TIGR01431 adm_rel adenosine de 98.1 0.00057 1.2E-08 69.3 20.3 143 234-404 305-457 (479)
124 cd01310 TatD_DNAse TatD like p 97.9 0.00033 7.2E-09 65.1 15.1 134 233-401 106-251 (251)
125 PRK09875 putative hydrolase; P 97.8 0.003 6.5E-08 59.9 18.6 144 234-401 138-292 (292)
126 TIGR00010 hydrolase, TatD fami 97.8 0.00052 1.1E-08 63.9 13.5 136 234-402 107-252 (252)
127 COG1229 FwdA Formylmethanofura 97.6 9.8E-05 2.1E-09 70.3 6.2 66 382-447 437-509 (575)
128 KOG1097 Adenine deaminase/aden 97.5 0.0012 2.5E-08 63.8 11.2 138 235-403 227-372 (399)
129 COG0418 PyrC Dihydroorotase [N 97.4 0.025 5.3E-07 52.5 17.7 132 198-351 96-249 (344)
130 PRK10812 putative DNAse; Provi 97.3 0.0081 1.7E-07 56.4 14.6 137 233-403 109-257 (265)
131 COG3653 N-acyl-D-aspartate/D-g 97.3 0.00089 1.9E-08 64.5 7.7 67 381-448 472-552 (579)
132 PRK11449 putative deoxyribonuc 97.1 0.011 2.3E-07 55.3 13.3 135 233-402 112-258 (258)
133 PF02126 PTE: Phosphotriestera 97.0 0.02 4.3E-07 54.8 13.8 152 233-400 140-307 (308)
134 PF01026 TatD_DNase: TatD rela 96.8 0.02 4.4E-07 53.5 12.5 135 233-401 109-255 (255)
135 PRK10425 DNase TatD; Provision 96.7 0.53 1.2E-05 44.0 21.6 136 234-402 107-258 (258)
136 COG1099 Predicted metal-depend 96.5 0.26 5.7E-06 43.8 16.2 135 234-402 113-253 (254)
137 COG0084 TatD Mg-dependent DNas 96.5 0.043 9.4E-07 50.9 11.8 136 234-402 111-256 (256)
138 COG1735 Php Predicted metal-de 96.5 0.37 8E-06 45.1 17.6 155 233-402 150-314 (316)
139 TIGR01429 AMP_deaminase AMP de 95.9 0.06 1.3E-06 55.7 10.4 122 249-404 439-566 (611)
140 cd01319 AMPD AMP deaminase (AM 95.6 0.062 1.3E-06 54.5 9.1 123 248-404 326-454 (496)
141 PLN03055 AMP deaminase; Provis 95.4 0.093 2E-06 54.1 9.5 122 249-404 417-544 (602)
142 KOG2902 Dihydroorotase [Nucleo 95.1 0.21 4.6E-06 44.8 9.8 166 125-318 30-207 (344)
143 PF04909 Amidohydro_2: Amidohy 94.7 0.17 3.7E-06 47.3 9.0 140 238-402 120-273 (273)
144 PLN02768 AMP deaminase 94.4 0.21 4.5E-06 52.9 9.3 122 249-404 650-777 (835)
145 PTZ00310 AMP deaminase; Provis 94.2 0.22 4.7E-06 56.0 9.2 122 249-403 1110-1236(1453)
146 cd01311 PDC_hydrolase 2-pyrone 93.2 0.94 2E-05 42.4 10.7 106 233-354 108-224 (263)
147 PRK06361 hypothetical protein; 93.2 0.33 7.1E-06 43.9 7.3 97 281-402 114-210 (212)
148 PTZ00310 AMP deaminase; Provis 92.8 0.44 9.6E-06 53.7 8.8 123 249-404 480-608 (1453)
149 KOG3020 TatD-related DNase [Re 90.1 5.5 0.00012 37.7 11.8 73 235-313 135-207 (296)
150 PRK00912 ribonuclease P protei 89.5 7.7 0.00017 35.6 12.5 149 233-413 67-228 (237)
151 COG3618 Predicted metal-depend 86.3 17 0.00036 34.1 12.2 142 235-402 124-278 (279)
152 COG2159 Predicted metal-depend 85.7 11 0.00024 35.9 11.3 136 234-404 143-292 (293)
153 COG1831 Predicted metal-depend 83.6 12 0.00027 34.5 9.8 138 230-403 140-283 (285)
154 COG0502 BioB Biotin synthase a 78.8 13 0.00027 35.9 8.7 73 229-305 81-157 (335)
155 COG1603 RPP1 RNase P/RNase MRP 72.6 76 0.0016 28.8 13.3 148 233-412 62-223 (229)
156 cd01301 rDP_like renal dipepti 66.9 25 0.00055 33.7 7.8 67 236-312 155-232 (309)
157 COG1751 Uncharacterized conser 64.8 80 0.0017 26.6 9.0 107 233-347 12-128 (186)
158 TIGR01496 DHPS dihydropteroate 62.8 35 0.00077 31.8 7.7 63 236-310 62-126 (257)
159 cd01524 RHOD_Pyr_redox Member 61.6 10 0.00022 28.6 3.3 40 39-80 45-84 (90)
160 PF01244 Peptidase_M19: Membra 60.8 13 0.00028 35.9 4.6 72 237-313 162-239 (320)
161 TIGR01182 eda Entner-Doudoroff 55.8 99 0.0021 27.7 9.0 73 232-311 17-89 (204)
162 PF13188 PAS_8: PAS domain; PD 54.9 9 0.0002 26.6 1.9 26 45-71 11-36 (64)
163 PRK06256 biotin synthase; Vali 54.6 1.1E+02 0.0025 29.5 10.2 109 231-346 90-204 (336)
164 PRK06015 keto-hydroxyglutarate 53.3 1E+02 0.0023 27.5 8.7 73 232-311 13-85 (201)
165 PRK05588 histidinol-phosphatas 49.6 40 0.00086 31.2 5.8 51 292-352 169-220 (255)
166 PF13426 PAS_9: PAS domain; PD 49.4 12 0.00025 28.3 1.9 27 46-72 2-28 (104)
167 PRK07114 keto-hydroxyglutarate 49.3 1E+02 0.0022 28.0 8.1 77 232-311 24-100 (222)
168 PF06415 iPGM_N: BPG-independe 49.2 27 0.0006 31.6 4.4 25 234-258 45-70 (223)
169 COG2355 Zn-dependent dipeptida 48.8 47 0.001 31.8 6.1 67 237-313 151-228 (313)
170 PF00989 PAS: PAS fold; Inter 47.8 15 0.00033 28.2 2.3 28 45-72 11-38 (113)
171 TIGR00433 bioB biotin syntheta 47.8 2.4E+02 0.0053 26.5 12.4 110 231-346 61-175 (296)
172 PRK07328 histidinol-phosphatas 45.9 56 0.0012 30.6 6.2 51 293-352 181-231 (269)
173 COG0134 TrpC Indole-3-glycerol 45.8 1.9E+02 0.0041 26.9 9.3 79 231-311 139-238 (254)
174 PRK09613 thiH thiamine biosynt 45.3 3.1E+02 0.0067 28.1 11.7 116 230-348 113-239 (469)
175 PF08448 PAS_4: PAS fold; Int 44.5 16 0.00035 27.9 2.0 28 45-72 5-32 (110)
176 PLN02389 biotin synthase 43.2 2.5E+02 0.0055 27.8 10.5 112 230-348 114-232 (379)
177 PF07908 D-aminoacyl_C: D-amin 42.5 24 0.00051 23.4 2.2 15 434-448 18-32 (48)
178 PRK12330 oxaloacetate decarbox 42.4 4.1E+02 0.0088 27.5 13.8 38 232-269 181-223 (499)
179 PRK15108 biotin synthase; Prov 42.3 3E+02 0.0066 26.8 10.9 68 231-304 75-148 (345)
180 PRK08392 hypothetical protein; 42.3 1.7E+02 0.0036 26.3 8.5 42 295-352 143-184 (215)
181 PRK14042 pyruvate carboxylase 40.8 4.7E+02 0.01 27.8 14.0 28 232-259 180-208 (596)
182 PRK10076 pyruvate formate lyas 40.5 71 0.0015 28.8 5.7 31 228-258 47-77 (213)
183 PRK06552 keto-hydroxyglutarate 39.6 2.4E+02 0.0053 25.3 9.0 76 232-311 22-97 (213)
184 cd01533 4RHOD_Repeat_2 Member 39.5 49 0.0011 25.9 4.1 34 39-72 58-93 (109)
185 TIGR01235 pyruv_carbox pyruvat 38.6 6.8E+02 0.015 29.0 14.2 37 232-268 715-754 (1143)
186 PRK07945 hypothetical protein; 38.3 1.1E+02 0.0024 29.7 7.1 47 292-352 248-294 (335)
187 PF01081 Aldolase: KDPG and KH 37.8 1.1E+02 0.0023 27.3 6.3 72 233-311 18-89 (196)
188 PRK09240 thiH thiamine biosynt 37.6 3.3E+02 0.0071 26.9 10.4 107 230-344 102-217 (371)
189 PRK05434 phosphoglyceromutase; 37.2 94 0.002 32.1 6.6 25 234-258 127-152 (507)
190 PRK08445 hypothetical protein; 35.9 1.7E+02 0.0036 28.6 8.0 114 231-348 72-201 (348)
191 PRK08508 biotin synthase; Prov 35.7 3.8E+02 0.0081 25.2 10.1 69 231-304 39-114 (279)
192 TIGR03551 F420_cofH 7,8-dideme 34.8 3E+02 0.0066 26.7 9.6 110 231-347 69-197 (343)
193 PRK05718 keto-hydroxyglutarate 34.0 3.2E+02 0.007 24.6 8.9 73 232-312 24-97 (212)
194 COG2897 SseA Rhodanese-related 34.0 66 0.0014 30.4 4.6 32 42-73 231-262 (285)
195 cd01523 RHOD_Lact_B Member of 33.6 50 0.0011 25.2 3.2 33 39-71 55-87 (100)
196 cd01526 RHOD_ThiF Member of th 33.5 45 0.00098 26.8 3.1 32 43-74 70-101 (122)
197 PF13594 Amidohydro_5: Amidohy 32.6 35 0.00075 24.2 2.0 12 122-133 57-68 (68)
198 PRK09140 2-dehydro-3-deoxy-6-p 31.6 3.8E+02 0.0082 23.9 10.4 74 232-311 19-92 (206)
199 PLN02460 indole-3-glycerol-pho 31.0 3.3E+02 0.0072 26.5 8.8 36 231-266 213-248 (338)
200 TIGR01307 pgm_bpd_ind 2,3-bisp 30.8 1.4E+02 0.0031 30.7 6.6 25 234-258 123-148 (501)
201 PRK05927 hypothetical protein; 29.8 2.2E+02 0.0048 27.8 7.7 72 231-303 75-158 (350)
202 cd07937 DRE_TIM_PC_TC_5S Pyruv 29.7 4.7E+02 0.01 24.5 14.2 38 232-269 175-215 (275)
203 PRK07094 biotin synthase; Prov 29.7 5E+02 0.011 24.8 10.5 107 232-345 70-181 (323)
204 PRK13802 bifunctional indole-3 29.3 6E+02 0.013 27.5 11.2 105 232-351 144-269 (695)
205 TIGR01856 hisJ_fam histidinol 29.2 54 0.0012 30.3 3.2 51 293-352 189-239 (253)
206 PRK05301 pyrroloquinoline quin 28.8 5.2E+02 0.011 25.4 10.3 112 231-349 45-161 (378)
207 PLN02723 3-mercaptopyruvate su 28.5 74 0.0016 30.7 4.1 40 33-72 251-296 (320)
208 COG0696 GpmI Phosphoglyceromut 28.5 1.7E+02 0.0037 29.7 6.5 25 234-258 126-151 (509)
209 PRK07329 hypothetical protein; 28.4 80 0.0017 29.1 4.2 50 293-352 169-219 (246)
210 cd01527 RHOD_YgaP Member of th 28.3 56 0.0012 24.9 2.7 30 42-71 51-80 (99)
211 PRK02308 uvsE putative UV dama 28.2 2.9E+02 0.0064 26.4 8.0 26 231-256 87-112 (303)
212 COG0800 Eda 2-keto-3-deoxy-6-p 27.7 3.8E+02 0.0083 24.1 8.0 71 233-311 23-94 (211)
213 PRK14041 oxaloacetate decarbox 27.6 6.8E+02 0.015 25.6 13.2 38 232-269 179-219 (467)
214 PF07287 DUF1446: Protein of u 26.8 3.1E+02 0.0066 27.0 7.9 104 235-348 58-166 (362)
215 TIGR02351 thiH thiazole biosyn 26.8 2.1E+02 0.0045 28.2 6.9 69 230-304 101-174 (366)
216 TIGR02318 phosphono_phnM phosp 26.5 3.5E+02 0.0077 26.7 8.6 96 230-352 170-273 (376)
217 PRK14040 oxaloacetate decarbox 26.2 8.1E+02 0.017 26.0 13.9 28 232-259 181-209 (593)
218 PRK08609 hypothetical protein; 26.1 2.2E+02 0.0048 30.0 7.3 59 280-352 459-528 (570)
219 cd01522 RHOD_1 Member of the R 25.8 89 0.0019 24.8 3.5 49 43-92 62-111 (117)
220 PRK09282 pyruvate carboxylase 25.8 8.2E+02 0.018 26.0 13.4 37 232-268 180-219 (592)
221 TIGR01108 oadA oxaloacetate de 24.9 8.5E+02 0.018 25.8 13.6 28 232-259 175-203 (582)
222 PF00218 IGPS: Indole-3-glycer 24.6 3.7E+02 0.0081 25.0 7.7 36 231-266 141-176 (254)
223 cd01528 RHOD_2 Member of the R 24.5 1.1E+02 0.0023 23.4 3.7 30 43-72 56-85 (101)
224 cd01529 4RHOD_Repeats Member o 24.4 96 0.0021 23.4 3.4 30 42-71 53-82 (96)
225 PLN02538 2,3-bisphosphoglycera 23.9 99 0.0021 32.2 4.1 25 234-258 144-169 (558)
226 PRK12331 oxaloacetate decarbox 23.9 7.8E+02 0.017 25.0 13.3 38 232-269 180-220 (448)
227 PRK08123 histidinol-phosphatas 23.7 89 0.0019 29.2 3.6 53 292-352 200-252 (270)
228 TIGR02109 PQQ_syn_pqqE coenzym 23.6 5.9E+02 0.013 24.7 9.6 112 231-349 36-152 (358)
229 TIGR02981 phageshock_pspE phag 23.6 99 0.0022 24.0 3.3 30 44-73 57-86 (101)
230 COG5016 Pyruvate/oxaloacetate 23.2 5.4E+02 0.012 25.8 8.6 20 118-137 100-119 (472)
231 COG1387 HIS2 Histidinol phosph 22.8 1.9E+02 0.0042 26.4 5.5 57 280-352 125-196 (237)
232 cd01449 TST_Repeat_2 Thiosulfa 22.6 1.3E+02 0.0029 23.5 4.0 31 42-72 75-105 (118)
233 cd01448 TST_Repeat_1 Thiosulfa 22.4 1.8E+02 0.004 22.9 4.8 31 42-72 76-107 (122)
234 PRK09248 putative hydrolase; V 22.4 3.2E+02 0.0069 25.0 7.0 53 292-352 143-195 (246)
235 PF12860 PAS_7: PAS fold 22.0 67 0.0015 25.2 2.1 29 45-73 5-33 (115)
236 PLN02160 thiosulfate sulfurtra 21.8 72 0.0016 26.4 2.3 31 42-72 78-108 (136)
237 PRK08444 hypothetical protein; 21.3 7.8E+02 0.017 24.1 10.1 68 231-304 79-163 (353)
238 COG0826 Collagenase and relate 21.3 7.8E+02 0.017 24.1 9.6 80 231-311 45-146 (347)
239 COG0788 PurU Formyltetrahydrof 21.2 1.4E+02 0.0031 27.8 4.1 92 236-353 129-226 (287)
240 PRK00162 glpE thiosulfate sulf 21.0 1.3E+02 0.0029 23.2 3.6 35 38-72 51-85 (108)
241 cd01444 GlpE_ST GlpE sulfurtra 20.8 1.5E+02 0.0033 22.1 3.8 35 38-72 49-83 (96)
242 cd01317 DHOase_IIa Dihydroorot 20.8 1.3E+02 0.0029 29.5 4.4 26 235-260 172-198 (374)
243 PRK11493 sseA 3-mercaptopyruva 20.8 1.3E+02 0.0028 28.4 4.0 39 42-81 228-266 (281)
244 PRK09236 dihydroorotase; Revie 20.4 2.4E+02 0.0052 28.5 6.2 66 235-310 216-284 (444)
245 PRK06740 histidinol-phosphatas 20.3 1.4E+02 0.0031 28.9 4.3 51 294-352 244-294 (331)
246 COG2185 Sbm Methylmalonyl-CoA 20.0 5.3E+02 0.011 21.6 8.0 71 239-311 54-124 (143)
No 1
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=100.00 E-value=1.4e-80 Score=620.22 Aligned_cols=434 Identities=37% Similarity=0.548 Sum_probs=379.5
Q ss_pred HHHHHHHHhcCCCCeEEE--eCCCCCCCCCCCCChhhhhhhCCCCeEEEEeccCchhhhcHHHHHHcCCCCCCCCCCCCe
Q 013175 4 DTVVQIYADSKKGSWILG--GGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGGT 81 (448)
Q Consensus 4 ~~~~~~~~~~~~~~wi~g--~g~~~~~~~~~~p~~~~LD~~~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~~~~~~~~gg~ 81 (448)
+.+++.++++++++|+++ +||++..|+++.||+.+||+++|++||+|.+.|+|.+|+||+||+++||++.+|+|+||.
T Consensus 95 ~~i~~~a~~~~~~~w~~~vG~g~~~~~~~~~~~t~~~lD~~~~~~Pv~l~r~~~H~a~~Ns~aL~~~Gi~~~t~~p~gg~ 174 (535)
T COG1574 95 AALRRQAARTPPGQWVVVVGWGWDEQFWEERLPTLAELDAAAPDHPVLLIRLDGHVAVANSAALRLAGITRDTPDPPGGI 174 (535)
T ss_pred HHHHHHHHhCCCCCceEEEEcChhhhccccCCCcHHHhhccCCCCCEEEEeccChHHHHhHHHHHHcCCCCCCCCCCCCc
Confidence 344455666777776655 556667777779999999999999999999999999999999999999999999999998
Q ss_pred EeeCCCCCCCchhHHHHHHHhhhcCCCCCHHHHHHHHHH-HHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHH
Q 013175 82 IMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLR-ASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWAS 160 (448)
Q Consensus 82 i~~d~~G~~tG~l~e~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (448)
|.||++|+|||+|.|.++.++....|..++++..+.... +.+++++.|||+|+||.. + ........+++.+.
T Consensus 175 ~~~d~~g~ptG~L~e~a~~~~~~~~~~~~~~~~~~~~~~~a~~~l~s~GiT~v~d~~~-~------~~~~~~~~~~r~~~ 247 (535)
T COG1574 175 IGRDADGEPTGLLLENAQALVARLAPPPSPAEELEAAAARAARELNSLGITGVHDMAG-Y------QGYYADYEAYRALA 247 (535)
T ss_pred ccccCCCCCCeeehHhhHHHHHHhcCCCCchHHHHHHHHHHHHHHHhcCCeEEEcccc-c------ccchhHHHHHHHHH
Confidence 889999999999999998999988887776665555544 899999999999999974 1 11234567888899
Q ss_pred hcCCCeeEEEEccCCcchhh-HHHHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHH
Q 013175 161 YSEKMKIRVCLFFPLETWSS-LADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLS 239 (448)
Q Consensus 161 ~~~~l~irv~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~ 239 (448)
..+++++|+...+....... ..+.. .......+++.+++|+|.||+++++||++.+||.+.++..|.+.+++++|.+
T Consensus 248 ~~~~l~~rv~~~l~~~~~~~~~~~~~--~~~~~~~~~~~g~~K~f~Dgslg~rtA~l~~~y~d~~~~~G~~l~~~e~l~~ 325 (535)
T COG1574 248 AGGELPVRVALLLFTEDLKEERLDLL--RQTGAKGLLQGGGVKLFADGSLGERTALLAAPYADGPGPSGELLLTEEELEE 325 (535)
T ss_pred hcCcceEEEEeeccccchhhHHHhhc--ccCCccceeecCceEEEEeCCCCcchhhccCcccCCCCCCCCcccCHHHHHH
Confidence 99999999988764433222 11111 1222356788899999999999999999999999998888999999999999
Q ss_pred HHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHH
Q 013175 240 MTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSA 319 (448)
Q Consensus 240 ~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~ 319 (448)
+++.+.++|+++++||+||++++.+|++||++....+..+.||+|+|++++++++++|++++|+.+++||.|+..+..++
T Consensus 326 ~v~~a~~~gl~v~vHAiGD~Av~~~LdafE~~~~~~~~~~~r~rieH~~~v~~~~i~R~~~Lgv~~svQP~f~~~~~~~~ 405 (535)
T COG1574 326 LVRAADERGLPVAVHAIGDGAVDAALDAFEKARKKNGLKGLRHRIEHAELVSPDQIERFAKLGVIASVQPNFLFSDGEWY 405 (535)
T ss_pred HHHHHHHCCCcEEEEEechHHHHHHHHHHHHHhhhcCCccCCceeeeeeecCHhHHHHHHhcCceEeeccccccccchHH
Confidence 99999999999999999999999999999999998888889999999999999999999999999999999998777888
Q ss_pred HHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHH
Q 013175 320 RKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARA 399 (448)
Q Consensus 320 ~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~ 399 (448)
.+++|.+|. +..+|+++|+++|+++++|||+|++++|||.+++.+|+|+...+. ...++++||++|||++||.|+|++
T Consensus 406 ~~rlG~~r~-~~~~p~~~ll~~G~~la~gSD~Pv~~~dP~~~i~~AVtr~~~~g~-~~~~~~~L~~~eAL~~yT~~~A~a 483 (535)
T COG1574 406 VDRLGEERA-SRSYPFRSLLKAGVPLAGGSDAPVEPYDPWLGIYAAVTRKTPGGR-VLGPEERLTREEALRAYTEGGAYA 483 (535)
T ss_pred HHhhhhhhh-hccCcHHHHHHCCCeEeccCCCCCCCCChHHHHHHHHcCCCCCCC-CCccccccCHHHHHHHHhhhhHHh
Confidence 899999999 889999999999999999999999999999999999999876432 122344899999999999999999
Q ss_pred cccCCCcccccCCCcccEEEecCCCCC-ChhhhccCeeeEEEECCEEecC
Q 013175 400 CFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVSASIEATYVSGVQAYP 448 (448)
Q Consensus 400 ~g~~~~~Gsi~~Gk~ADlvvld~d~~~-~~~~~~~~~v~~t~~~G~~V~~ 448 (448)
.|.++++|+|++||.|||+|+|.|++. +++.+...+|..|+++|++||+
T Consensus 484 ~~~e~~~G~Le~G~~AD~~Vld~d~f~~~~~~i~~~~v~~T~~~Gk~VY~ 533 (535)
T COG1574 484 SGAEGEKGSLEPGKLADFAVLDRDPFTVDPDSIKDTKVVLTIVAGKVVYR 533 (535)
T ss_pred hhccccccccccCceeeEEEecCCcccCChHHhccceEEEEEEcCeEeec
Confidence 999999999999999999999999999 8888889999999999999995
No 2
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=100.00 E-value=2.8e-69 Score=550.85 Aligned_cols=408 Identities=43% Similarity=0.645 Sum_probs=348.6
Q ss_pred cHHHHHHHH-HhcCCCCeEEEeCCCCCCCC-CCCCChhhhhhhCCCCeEEEEeccCchhhhcHHHHHHcCCCCCCCCCCC
Q 013175 2 EVDTVVQIY-ADSKKGSWILGGGWNNDLWG-GDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSEDPNG 79 (448)
Q Consensus 2 ~~~~~~~~~-~~~~~~~wi~g~g~~~~~~~-~~~p~~~~LD~~~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~~~~~~~~g 79 (448)
|+...++++ ...++++||+|+||++.+|+ ++.||+++||+++|++||+|++.|+|.+|+||+||+++||++++++|.|
T Consensus 67 e~~~~l~~~~~~~~~~~wi~~~g~~~~~~~~~~~p~~~~LD~~~~d~Pv~l~~~~~H~~~~Ns~al~~~gi~~~~~~~~~ 146 (479)
T cd01300 67 EALARIREDAAAAPPGEWILGFGWDESLLGEGRYPTRAELDAVSPDRPVLLLRRDGHSAWVNSAALRLAGITRDTPDPPG 146 (479)
T ss_pred HHHHHHHHHHHhCCCCCeEEECCcCHHHcCCCCCCCHHHHhcccCCCcEEEEccCchHHHHHHHHHHHcCCCCCCCCCCC
Confidence 344444443 44677899999999999995 6899999999999999999999999999999999999999999999999
Q ss_pred CeEeeCCCCCCCchhHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHH
Q 013175 80 GTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWA 159 (448)
Q Consensus 80 g~i~~d~~G~~tG~l~e~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~ 159 (448)
|.|+||++|+|||+|.|.++..+...++.++.+++.+.++.+++.+++.|||||+|+.... ....+.++++
T Consensus 147 g~~~~~~~g~~tG~l~e~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GiT~v~d~~~~~---------~~~~~~~~~l 217 (479)
T cd01300 147 GEIVRDADGEPTGVLVEAAAALVLEAVPPPTPEERRAALRAAARELASLGVTTVHDAGGGA---------ADDIEAYRRL 217 (479)
T ss_pred CEEeeCCCCCccEEEeHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCCcEEEcCCCCh---------hhHHHHHHHH
Confidence 9999999999999999998888888888899999999999999999999999999986321 1124678888
Q ss_pred HhcCCCeeEEEEccCCcchh--hHHHHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHH
Q 013175 160 SYSEKMKIRVCLFFPLETWS--SLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESL 237 (448)
Q Consensus 160 ~~~~~l~irv~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l 237 (448)
.+++++++|+..+....... ...+.........++++++.++|+|+||+++++||+|.+||.+.++..|.+.+++++|
T Consensus 218 ~~~~~l~~rv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vKl~~DG~~~~~ta~l~~pY~~~~~~~g~~~~~~e~l 297 (479)
T cd01300 218 AAAGELTLRVRVALYVSPLAEDLLEELGARKNGAGDDRLRLGGVKLFADGSLGSRTAALSEPYLDSPGTGGLLLISPEEL 297 (479)
T ss_pred HHCCCCeEEEEEEeccccchhhhhhHHhhhccCCCCCcEEEeeEEEEEcCCCCcccccccCCcCCCCCCCCCccCCHHHH
Confidence 88898898887643221111 1111111112234678999999999999999999999999999888889999999999
Q ss_pred HHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchh
Q 013175 238 LSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDAD 317 (448)
Q Consensus 238 ~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~ 317 (448)
+++++.|+++|+++++|++|+.+++.++++++++....|..+.|++|+|++.++++++++++++|+.+++||.+.+....
T Consensus 298 ~~~~~~a~~~g~~v~~Ha~gd~~i~~~l~~~~~~~~~~g~~~~r~~i~H~~~~~~~~~~~l~~~gv~~~~~P~~~~~~~~ 377 (479)
T cd01300 298 EELVRAADEAGLQVAIHAIGDRAVDTVLDALEAALKDNPRADHRHRIEHAQLVSPDDIPRFAKLGVIASVQPNHLYSDGD 377 (479)
T ss_pred HHHHHHHHHCCCCEEEEEecHHHHHHHHHHHHHHHHhcCCCCCCceeeecccCCHHHHHHHHHcCCceEeCcccccCchH
Confidence 99999999999999999999999999999999988877777889999999999999999999999999999998876555
Q ss_pred HHHHh-cCHhhhhhhhhhHHHHHHcCCceeecCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHH
Q 013175 318 SARKK-LGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSA 396 (448)
Q Consensus 318 ~~~~~-~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~ 396 (448)
..... +|..+. +..+|+++++++|+++++|||+|+.+.+||..++.+++|........+.+++++|++++|+++|.||
T Consensus 378 ~~~~~~lg~~~~-~~~~p~~~~~~~Gv~v~lGSD~~~~~~~p~~~~~~av~~~~~~~~~~~~~~~~ls~~~al~~~T~~~ 456 (479)
T cd01300 378 AAEDRRLGEERA-KRSYPFRSLLDAGVPVALGSDAPVAPPDPLLGIWAAVTRKTPGGGVLGNPEERLSLEEALRAYTIGA 456 (479)
T ss_pred HHHHhcccHHHH-hcCchHHHHHHCCCeeeccCCCCCCCCCHHHHHHHHheeeCCCCCCCCCccccCCHHHHHHHHHHHH
Confidence 44433 687777 7789999999999999999999988899999999999886543222223667899999999999999
Q ss_pred HHHcccCCCcccccCCCcccEEE
Q 013175 397 ARACFLENDVGSLSPGKIADFVI 419 (448)
Q Consensus 397 A~~~g~~~~~Gsi~~Gk~ADlvv 419 (448)
|+++|+++++|+|++||.|||||
T Consensus 457 A~~lg~e~~~GsLe~Gk~ADlvv 479 (479)
T cd01300 457 AYAIGEEDEKGSLEPGKLADFVV 479 (479)
T ss_pred HHHhccccccccccCCcccceeC
Confidence 99999998899999999999986
No 3
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=100.00 E-value=2.4e-51 Score=411.07 Aligned_cols=345 Identities=42% Similarity=0.620 Sum_probs=287.8
Q ss_pred EEeCCCCCCCC-CCCC-Chhhh--hhhCCCCeEEEEeccCchhhhcHHHHHHcCCCCCCCCCCCCeEeeCCCCCCCchhH
Q 013175 20 LGGGWNNDLWG-GDLP-MASWI--DDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLI 95 (448)
Q Consensus 20 ~g~g~~~~~~~-~~~p-~~~~L--D~~~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~~~~~~~~gg~i~~d~~G~~tG~l~ 95 (448)
+|+||++..|. ++.| ++++| |+++|++||++.+.++|.+|+||+||++ .+|.|||+|+
T Consensus 46 ~~~g~~~~~~~~~~~~~~~~~L~~D~~~~~~Pv~~~~~~~h~~~~Ns~al~~------------------~~g~~~G~l~ 107 (404)
T PF07969_consen 46 VGFGWDESLFPEGRLPPTREELPWDEASPDRPVFIRRFDGHSAWLNSAALEL------------------ADGEPTGILR 107 (404)
T ss_dssp EEEEEHHHHHCCSSTCTCHHHHHCTTSSSSSHEEEEECCCSEEEECHHHHHH------------------TEETTCCEEE
T ss_pred ccCCCCHHHhhcccccCCHHHhhhhhHhcceEEEEEeCcChHHHHhHHHhhc------------------cccCCceeee
Confidence 88999998884 5677 99999 9999999999999999999999999999 4689999999
Q ss_pred HHHHHHhhhcCCC--CCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEcc
Q 013175 96 DAAMKLILPWIPE--VSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFF 173 (448)
Q Consensus 96 e~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~ 173 (448)
|.++......++. .+.+++++.++.+...+.+.||||+.|+...+ ....+.++.++++.+.+.+++|+.++.
T Consensus 108 e~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~a~GiTt~~d~~~~~------~~~~~~~~~~~~l~~~~~l~~rv~~~~ 181 (404)
T PF07969_consen 108 EAAMVLGWRAIPATAAELEEMREALREAAMAAGAYGITTVLDYGGGF------ASDPEDLEALRELAAEGGLPLRVHLYP 181 (404)
T ss_dssp HHHHHHCCHHHHHTHHHHHHHHHHHHHHHHHHCHTCEEEETTCECCC------GEHHHHHHHHHHHHHCTC--SEEEEEE
T ss_pred hhhhhhHHhhCccccCCHHHHHHHHHHHHHHhcCCCeEEecCCcccc------CCCHHHHHHHHHHhhhcCCCeeeeeec
Confidence 9988666665655 56778888888889999999999999987211 122456778888999999999998753
Q ss_pred CCcchhhHHHHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCC-cCCCC----CCCcccCCCHHHHHHHHHHHHHCC
Q 013175 174 PLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEP-YADEP----HNYGLQVMELESLLSMTMASDKSG 248 (448)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~p-y~~~~----~~~g~~~~~~~~l~~~~~~a~~~g 248 (448)
++.++|+|.||+.+++++++..| |.+.+ +.+|...++++++.++++.|++.|
T Consensus 182 -----------------------~~~~vk~~~dg~~~~~~a~~~~~~~~~~~g~~~~~~g~~~~~~~~l~~~v~~a~~~g 238 (404)
T PF07969_consen 182 -----------------------RIGGVKIFADGSPGGRTALLEEPYYADEPGAPVHISGLPSFDPEELEELVRAAREAG 238 (404)
T ss_dssp -----------------------EEEEEEEESSSSTTHHHHHHHHHHHHHHHTSEEEETC--SSSHHHHHHHHHHHHHCT
T ss_pred -----------------------ccCceeeccccccccchhhhccccccCcccccccccccccccchhHHHHHHHHHhcC
Confidence 46789999999999999999998 66543 356888899999999999999999
Q ss_pred CcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCch-hHHHHhcCHhh
Q 013175 249 LQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDA-DSARKKLGVDR 327 (448)
Q Consensus 249 ~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~-~~~~~~~g~~r 327 (448)
+++++|++|+.+++.+++++++.... .+++|++..+++++++++++|+.++++|.++..+. ..+...++.++
T Consensus 239 ~~v~vHa~gd~a~~~~l~a~~~~~~~-------~~i~h~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~ 311 (404)
T PF07969_consen 239 LQVAVHAIGDRAIDEALDAIEAARAR-------GRIEHAELIDPDDIERMAELGVTASVQPHFLFSWGGEWYEERLGPER 311 (404)
T ss_dssp -EEEEEEESHHHHHHHHHHHHHHTCC-------HEEEEHCBCCHHHHHHHHHHTTEEEECCTHHHHETEETHHHHHHHHC
T ss_pred CeeEEEEcCCchHHhHHHHHHhhccc-------ceeeccccCCHHHHHHHHHhCCccccChhHhhhccchhhhhhhhhHH
Confidence 99999999999999999999886432 29999999999999999999999999997765555 45566777777
Q ss_pred hhhhhhhHHHHHHcCCceeecCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCCCCCCCCHHHHHHHHhHHHHHHcccCCC
Q 013175 328 AERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGW--DNAWIPSERISLTDALIAHTLSAARACFLEND 405 (448)
Q Consensus 328 ~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~~~~~--~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~ 405 (448)
. +..+|+++++++|+++++|||+|+.+.+||..++.+++|..... ...+.+++.+|++|||+++|+|||+++|++++
T Consensus 312 ~-~~~~~~~~~~~~Gv~v~~gsD~p~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~eAl~~~T~~~A~~~g~~~~ 390 (404)
T PF07969_consen 312 A-RRIYPIRSLLDAGVRVALGSDAPVSPPNPFRGIWAAVTRQMAGERSGPVLGPEQRLSLEEALRAYTSNPARALGLEDR 390 (404)
T ss_dssp G-GGBTHHHHHHHCTTEEEE--TTTTSSCCHHHHHHHHHHHHHCHHTHHHCCGGTGSSHHHHHHHHTTHHHHHHTT-TTT
T ss_pred H-HHHhHHHHHHhccCceecCcCCcccccCcchhhhhhhccccccccccccccccccCCHHHHHHHHhHHHHHHcCCCCC
Confidence 7 67899999999999999999999999999999999998765421 11233458899999999999999999999998
Q ss_pred cccccCCCcccEEE
Q 013175 406 VGSLSPGKIADFVI 419 (448)
Q Consensus 406 ~Gsi~~Gk~ADlvv 419 (448)
+|+|+|||.|||||
T Consensus 391 ~Gsl~~Gk~AD~vV 404 (404)
T PF07969_consen 391 KGSLEPGKLADFVV 404 (404)
T ss_dssp SSSSSTTSBS-EEE
T ss_pred cceECCCCCcCeEC
Confidence 89999999999997
No 4
>PRK08204 hypothetical protein; Provisional
Probab=99.96 E-value=1.1e-27 Score=242.71 Aligned_cols=201 Identities=20% Similarity=0.221 Sum_probs=155.8
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEecchHH--HHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeec
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAIGDRA--NDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQ 308 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a--~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~ 308 (448)
..+++.++++++.|++.|+++++|+.++.. ....++.+. ..+..+.++.|+||.++++++++++++.|+.+++|
T Consensus 197 ~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~l~----~~g~~~~~~~i~H~~~~~~~~~~~la~~g~~v~~~ 272 (449)
T PRK08204 197 FSSWEVARADFRLARELGLPISMHQGFGPWGATPRGVEQLH----DAGLLGPDLNLVHGNDLSDDELKLLADSGGSFSVT 272 (449)
T ss_pred cCCHHHHHHHHHHHHHcCCcEEEEEcCCCcccCCCHHHHHH----HCCCCCCCeEEEecCCCCHHHHHHHHHcCCCEEEC
Confidence 356888999999999999999999965422 111222222 24666778999999999999999999999999999
Q ss_pred cccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCC-CCCCHHHHHHHHHcCCCC--CC-----CCCCCCC
Q 013175 309 PQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-ADINPLCAIRTAMKRIPP--GW-----DNAWIPS 380 (448)
Q Consensus 309 P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~-~~~~p~~~~~~a~~r~~~--~~-----~~~~~~~ 380 (448)
|.+. ..+| ...+|+++++++|+++++|||++. .+.+||..++.++.+... .. ...+.++
T Consensus 273 P~~~--------~~~g-----~~~~~~~~~~~~Gv~v~lGtD~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 339 (449)
T PRK08204 273 PEIE--------MMMG-----HGYPVTGRLLAHGVRPSLGVDVVTSTGGDMFTQMRFALQAERARDNAVHLREGGMPPPR 339 (449)
T ss_pred hHHH--------hhhc-----CCCCcHHHHHhcCCceeeccccCCCCCcCHHHHHHHHHHHHHhhcccccccccccCCCc
Confidence 9752 1233 346799999999999999999863 468999999888754221 10 0012345
Q ss_pred CCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC-C----h-hhhc----cCeeeEEEECCEEecC
Q 013175 381 ERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-D----F-AAEV----SASIEATYVSGVQAYP 448 (448)
Q Consensus 381 ~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~-~----~-~~~~----~~~v~~t~~~G~~V~~ 448 (448)
+++++.++|+++|.|+|+++|+++++|+|++||.|||||+|.+++. . + ..+. ..+|..||++|++||+
T Consensus 340 ~~~~~~~al~~~T~~gA~~lg~~~~~G~le~Gk~ADlvvld~~~~~~~p~~dp~~~lv~~~~~~~v~~v~v~G~~v~~ 417 (449)
T PRK08204 340 LTLTARQVLEWATIEGARALGLEDRIGSLTPGKQADLVLIDATDLNLAPVHDPVGAVVQSAHPGNVDSVMVAGRAVKR 417 (449)
T ss_pred CCCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEcCCCccccCCcChhhhheeccCCCCceEEEECCEEEEE
Confidence 7899999999999999999999888999999999999999998543 1 1 2222 3689999999999973
No 5
>PRK09229 N-formimino-L-glutamate deiminase; Validated
Probab=99.96 E-value=1.8e-27 Score=241.05 Aligned_cols=201 Identities=21% Similarity=0.224 Sum_probs=152.8
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEecch-HHHHHHHHHHH----HhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEE
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVA 305 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~gd-~a~~~~l~a~~----~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~ 305 (448)
.++++.++++++.| ++|+++++|+.+. ..+..+++.+. +.....+..+.++.++||.++++++++++++.|+.+
T Consensus 212 ~~s~e~l~~~~~~A-~~g~~i~~H~~e~~~e~~~~~~~~g~~~~~~l~~~g~l~~~~~l~H~~~l~~~d~~~la~~g~~v 290 (456)
T PRK09229 212 AVTPDQLAAVLALA-APDGPVHIHIAEQTKEVDDCLAWSGARPVEWLLDHAPVDARWCLVHATHLTDAETARLARSGAVA 290 (456)
T ss_pred CCCHHHHHHHHHHh-cCCCceEEEeCCCHHHHHHHHHHcCCCHHHHHHHcCCCCCCeEEEeeccCCHHHHHHHHHcCCeE
Confidence 46899999999999 9999999999653 33333333221 122335677789999999999999999999999999
Q ss_pred eeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCC-CCC
Q 013175 306 SMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIP--PGWDNAWIP-SER 382 (448)
Q Consensus 306 ~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~~--~~~~~~~~~-~~~ 382 (448)
++||.+. ..+| ...+|+++++++|+++++|||++. ..++|..++.+..... ......+.+ .++
T Consensus 291 ~~~P~sn--------~~lg-----~g~~p~~~l~~~Gv~v~lGtD~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (456)
T PRK09229 291 GLCPTTE--------ANLG-----DGIFPAVDYLAAGGRFGIGSDSHV-SIDLVEELRLLEYGQRLRDRRRNVLAAAAQP 356 (456)
T ss_pred EECchhh--------hhhc-----CCCCCHHHHHHCCCeEEEecCCCC-CCCHHHHHHHHHHHHHHhhcCCccccccccc
Confidence 9999862 2344 457899999999999999999864 4688888776653211 111111222 268
Q ss_pred CCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC----Chhhhc--------cCeeeEEEECCEEecC
Q 013175 383 ISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE----DFAAEV--------SASIEATYVSGVQAYP 448 (448)
Q Consensus 383 ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~----~~~~~~--------~~~v~~t~~~G~~V~~ 448 (448)
+++.++|+++|.|+|+++|+ . +|+|++||.|||||+|.+... +++++. ..+|..||++|++||+
T Consensus 357 ~~~~~~l~~aT~~gA~alg~-~-~GsLe~Gk~ADlvvld~~~~~~~~~~~~~~~~~lv~~~~~~~V~~v~V~G~~v~~ 432 (456)
T PRK09229 357 SVGRRLFDAALAGGAQALGR-A-IGGLAVGARADLVVLDLDHPALAGREGDALLDRWVFAGGDAAVRDVWVAGRWVVR 432 (456)
T ss_pred chHHHHHHHHHHHHHHHhCC-C-cCCcCCCCccCEEEEeCCCccccCCChhhHHHHHhhcCCCCCeeEEEECCEEEEE
Confidence 89999999999999999999 3 899999999999999987532 112321 3579999999999983
No 6
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=99.96 E-value=2.4e-27 Score=238.04 Aligned_cols=288 Identities=18% Similarity=0.198 Sum_probs=194.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCC---cch-----h
Q 013175 108 EVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPL---ETW-----S 179 (448)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~---~~~-----~ 179 (448)
..+.++++.....+..++++.|||||.|+....+ .. ..+...+ ..+|+.+.... ... .
T Consensus 93 ~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--------~~---~~~~~~~---~g~r~~~~~~~~~~~~~~~~~~~ 158 (411)
T cd01298 93 LLTEEDVYLGALLALAEMIRSGTTTFADMYFFYP--------DA---VAEAAEE---LGIRAVLGRGIMDLGTEDVEETE 158 (411)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCccEEECccccch--------HH---HHHHHHH---hCCeEEEEcceecCCCcccccHH
Confidence 3567788888888899999999999999964211 11 2222222 24565443221 100 1
Q ss_pred h-HHHHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecch
Q 013175 180 S-LADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGD 258 (448)
Q Consensus 180 ~-~~~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd 258 (448)
. ..+.......... ...+.+|++.... .| ..+++++++++++.|+++|+++++|+.++
T Consensus 159 ~~~~~~~~~~~~~~~--~~~~~~k~~~~~~---------~~----------~~~~~~~l~~~~~~A~~~g~~v~~H~~e~ 217 (411)
T cd01298 159 EALAEAERLIREWHG--AADGRIRVALAPH---------AP----------YTCSDELLREVAELAREYGVPLHIHLAET 217 (411)
T ss_pred HHHHHHHHHHHHhcC--CCCCceEEEEeCC---------CC----------ccCCHHHHHHHHHHHHHcCCcEEEEecCC
Confidence 1 1111111000000 0123466654211 11 23578999999999999999999998765
Q ss_pred H-HHHHHHHHHHH----hHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhh
Q 013175 259 R-ANDLVLDMYKS----VVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESY 333 (448)
Q Consensus 259 ~-a~~~~l~a~~~----~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~ 333 (448)
. +.+.+++.+.. .....+..+.++.|+|++++++++++++++.|+.+++||.+.. .++ ...+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~l~~~~~~~l~~~gi~~~~~p~~~~--------~~~-----~~~~ 284 (411)
T cd01298 218 EDEVEESLEKYGKRPVEYLEELGLLGPDVVLAHCVWLTDEEIELLAETGTGVAHNPASNM--------KLA-----SGIA 284 (411)
T ss_pred HHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEEChHHhh--------hhh-----hCCC
Confidence 4 33333332211 1123455567899999999999999999999999999998521 122 2357
Q ss_pred hHHHHHHcCCceeecCCCCCC--CCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccC
Q 013175 334 LFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSP 411 (448)
Q Consensus 334 ~~~~~~~~Gv~v~~gSD~p~~--~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~ 411 (448)
|+++++++|+++++|||++.. +.+++.+++.++...... ...+++++++++|+++|.|||+++|++ .+|+|++
T Consensus 285 ~~~~~~~~Gv~~~~GsD~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~al~~~T~~~A~~lg~~-~~G~i~~ 359 (411)
T cd01298 285 PVPEMLEAGVNVGLGTDGAASNNNLDMFEEMRLAALLQKLA----HGDPTALPAEEALEMATIGGAKALGLD-EIGSLEV 359 (411)
T ss_pred CHHHHHHCCCcEEEeCCCCccCCCcCHHHHHHHHHHHhccc----cCCCCcCCHHHHHHHHHhhHHHHhCCc-cCCCcCC
Confidence 999999999999999998754 468898887765432210 112346999999999999999999998 6899999
Q ss_pred CCcccEEEecCCCCC--Chhhh--------ccCeeeEEEECCEEecC
Q 013175 412 GKIADFVILSTSSWE--DFAAE--------VSASIEATYVSGVQAYP 448 (448)
Q Consensus 412 Gk~ADlvvld~d~~~--~~~~~--------~~~~v~~t~~~G~~V~~ 448 (448)
|+.|||||+|.+... ..+++ ...+|..||++|++||.
T Consensus 360 G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~ 406 (411)
T cd01298 360 GKKADLILIDLDGPHLLPVHDPISHLVYSANGGDVDTVIVNGRVVME 406 (411)
T ss_pred CccCCEEEEeCCCCccCCccchhhHheEecCCCCeeEEEECCEEEEE
Confidence 999999999998543 22332 24689999999999973
No 7
>PRK09045 N-ethylammeline chlorohydrolase; Provisional
Probab=99.96 E-value=2.3e-27 Score=239.54 Aligned_cols=289 Identities=24% Similarity=0.253 Sum_probs=194.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCC---cc--hhhHH
Q 013175 108 EVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPL---ET--WSSLA 182 (448)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~---~~--~~~~~ 182 (448)
.+++++.+.....+..++++.|||||.|+... + . ...+...+. .+|+++.... .. .....
T Consensus 104 ~~~~~~~~~~~~~~~~e~l~~G~Ttv~d~~~~-~---------~--~~~~~~~~~---G~R~~~~~~~~~~~~~~~~~~~ 168 (443)
T PRK09045 104 WVSEEFVRDGTLLAIAEMLRGGTTCFNDMYFF-P---------E--AAAEAAHQA---GMRAQIGMPVLDFPTAWASDAD 168 (443)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCcEEEecccc-H---------H--HHHHHHHHc---CCeEEEecccccCCCccccCHH
Confidence 35788888888999999999999999998521 1 1 112233333 3576553221 10 01111
Q ss_pred HHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecch-HHH
Q 013175 183 DLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGD-RAN 261 (448)
Q Consensus 183 ~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd-~a~ 261 (448)
+.++........+....-+|+.. ..+.|| .++++.++++++.|+++|+++++|+.+. ..+
T Consensus 169 ~~l~~~~~~~~~~~~~~~i~~~~---------~~~~~~----------~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~ 229 (443)
T PRK09045 169 EYLAKGLELHDQWRHHPLISTAF---------APHAPY----------TVSDENLERIRTLAEQLDLPIHIHLHETAQEI 229 (443)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEE---------eCCCCC----------CCCHHHHHHHHHHHHHcCCCEEEeecCcHHHH
Confidence 21110000000000011133321 011122 4678999999999999999999999642 233
Q ss_pred HHHHHH-----HHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHH
Q 013175 262 DLVLDM-----YKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQ 336 (448)
Q Consensus 262 ~~~l~a-----~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~ 336 (448)
...++. ++. ....|..+.++.++||..+++++++++++.|+.+++||.... .++ ...+|++
T Consensus 230 ~~~~~~~g~~~~~~-l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~i~~~P~~~~--------~~~-----~~~~~~~ 295 (443)
T PRK09045 230 ADSLKQHGQRPLAR-LARLGLLGPRLIAVHMTQLTDAEIALLAETGCSVVHCPESNL--------KLA-----SGFCPVA 295 (443)
T ss_pred HHHHHHhCCCHHHH-HHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEECHHHHh--------hhc-----cCCCcHH
Confidence 333332 222 234577778999999999999999999999999999997521 122 3467999
Q ss_pred HHHHcCCceeecCCCCCC--CCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCc
Q 013175 337 SLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKI 414 (448)
Q Consensus 337 ~~~~~Gv~v~~gSD~p~~--~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ 414 (448)
+++++|+++++|||++.+ +.|++..+..+...... .....++++++++|+++|.|||+++|+++++|+|++||.
T Consensus 296 ~l~~~Gv~v~lGtD~~~~~~~~~~~~~~~~a~~~~~~----~~~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~ 371 (443)
T PRK09045 296 KLLQAGVNVALGTDGAASNNDLDLFGEMRTAALLAKA----VAGDATALPAHTALRMATLNGARALGLDDEIGSLEPGKQ 371 (443)
T ss_pred HHHHCCCeEEEecCCCCCCCCccHHHHHHHHHHHHhh----ccCCCCcCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCc
Confidence 999999999999998753 46889888776421110 011245699999999999999999999888999999999
Q ss_pred ccEEEecCCCCC-Ch-----hhh----ccCeeeEEEECCEEecC
Q 013175 415 ADFVILSTSSWE-DF-----AAE----VSASIEATYVSGVQAYP 448 (448)
Q Consensus 415 ADlvvld~d~~~-~~-----~~~----~~~~v~~t~~~G~~V~~ 448 (448)
|||||+|.+++. .+ ..+ ...+|..||++|++||+
T Consensus 372 ADlvv~d~~~~~~~p~~~~~~~lv~~~~~~~v~~v~v~G~~v~~ 415 (443)
T PRK09045 372 ADLVAVDLSGLETQPVYDPVSQLVYAAGREQVSHVWVAGKQLLD 415 (443)
T ss_pred CCEEEEeCCCCCcCCccChHhHhhEeCCCCCccEEEECCEEEEE
Confidence 999999998764 22 222 24579999999999984
No 8
>PRK07228 N-ethylammeline chlorohydrolase; Provisional
Probab=99.96 E-value=8.4e-27 Score=236.01 Aligned_cols=198 Identities=21% Similarity=0.280 Sum_probs=154.7
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHH--------hHHhcCCCCCCCeEEecccCChhhHHHHHhCC
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKS--------VVVTTGKRDQRFRIEHAQHLASGTAARFGDQG 302 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~--------~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~g 302 (448)
.++++.|+++++.|+++|+++++|+.++... ++.+++ .....+..+.+++++||+++++++++++++.|
T Consensus 195 ~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~---~~~~~~~~g~~~~~~l~~~g~~~~~~~l~H~~~~~~~~~~~~~~~g 271 (445)
T PRK07228 195 SCTEELLRGVRDLADEYGVRIHTHASENRGE---IETVEEETGMRNIHYLDEVGLTGEDLILAHCVWLDEEEREILAETG 271 (445)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCCHHH---HHHHHHHhCCCHHHHHHHCCCCCCCcEEEEEecCCHHHHHHHHHcC
Confidence 4678999999999999999999999776542 222221 12234666789999999999999999999999
Q ss_pred cEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCC--CCCHHHHHHHHHcCCCCCCCCCCCCC
Q 013175 303 IVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPS 380 (448)
Q Consensus 303 v~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~--~~~p~~~~~~a~~r~~~~~~~~~~~~ 380 (448)
+.+++||.... .++ ...+|+++++++|+++++|||++.. ..++|..+..++...... ....
T Consensus 272 ~~v~~~P~~~~--------~~~-----~~~~p~~~~~~~Gv~v~lGtD~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 334 (445)
T PRK07228 272 THVTHCPSSNL--------KLA-----SGIAPVPDLLERGINVALGADGAPCNNTLDPFTEMRQAALIQKVD----RLGP 334 (445)
T ss_pred CeEEEChHHhh--------hcc-----cccCcHHHHHHCCCeEEEcCCCCccCCCccHHHHHHHHHHHhhhc----cCCC
Confidence 99999998521 122 3467999999999999999997642 468998888776443210 0112
Q ss_pred CCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC-Chhh-----------hccCeeeEEEECCEEecC
Q 013175 381 ERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAA-----------EVSASIEATYVSGVQAYP 448 (448)
Q Consensus 381 ~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~-~~~~-----------~~~~~v~~t~~~G~~V~~ 448 (448)
..++++++|+++|.|||+++|+++.+|+|++|+.|||||+|.+.+. .+.. ....+|..||++|++||+
T Consensus 335 ~~~s~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~p~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 414 (445)
T PRK07228 335 TAMPARTVFEMATLGGAKAAGFEDEIGSLEEGKKADLAILDLDGLHATPSHGVDVLSHLVYAAHGSDVETTMVDGKIVME 414 (445)
T ss_pred cccCHHHHHHHHHHHHHHHhCCCCCccccCCCCccCEEEEcCCCcccCCCcccCHHHHhheeCCCCCeeEEEECCEEEEE
Confidence 4689999999999999999999877899999999999999998654 2221 124579999999999974
No 9
>PRK06151 N-ethylammeline chlorohydrolase; Provisional
Probab=99.96 E-value=3.5e-27 Score=240.57 Aligned_cols=198 Identities=21% Similarity=0.220 Sum_probs=154.1
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEec-chHHHHHHHHHHH----HhHHhcCCCCCCCeEEecccCCh---------hhHH
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAI-GDRANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLAS---------GTAA 296 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~-gd~a~~~~l~a~~----~~~~~~~~~~~r~~i~H~~~~~~---------~~i~ 296 (448)
.++++.|+++++.|+++|+++++|+. ++.+++.+.+.+. +.....|..+.+++++||.++++ ++++
T Consensus 217 ~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~g~l~~r~~l~H~~~l~~~~~~~~~~~~~~~ 296 (488)
T PRK06151 217 TCTVDLLRRTAAAARELGCPVRLHCAQGVLEVETVRRLHGTTPLEWLADVGLLGPRLLIPHATYISGSPRLNYSGGDDLA 296 (488)
T ss_pred CCCHHHHHHHHHHHHHCCCcEEEEECCchHHHHHHHHHcCCCHHHHHHHcCCCCCCcEEEEEEEcCCccccccCCHHHHH
Confidence 47899999999999999999999994 6555544443321 22334566778999999999999 9999
Q ss_pred HHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 013175 297 RFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNA 376 (448)
Q Consensus 297 ~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~~~~~~~~ 376 (448)
++++.|+.+++||... .++| ...+|+++++++|+++++|||+ .+.+||..++.++......
T Consensus 297 ~la~~g~~v~~~P~~~--------~~~g-----~~~~p~~~l~~~Gv~v~lGtD~--~~~~~~~~~~~~~~~~~~~---- 357 (488)
T PRK06151 297 LLAEHGVSIVHCPLVS--------ARHG-----SALNSFDRYREAGINLALGTDT--FPPDMVMNMRVGLILGRVV---- 357 (488)
T ss_pred HHHhcCCEEEECchhh--------hhhc-----cccccHHHHHHCCCcEEEECCC--CCccHHHHHHHHHHHHHHh----
Confidence 9999999999999742 1233 3568999999999999999997 3568998888765322110
Q ss_pred CCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC-Ch-----hhhc----cCeeeEEEECCEEe
Q 013175 377 WIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DF-----AAEV----SASIEATYVSGVQA 446 (448)
Q Consensus 377 ~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~-~~-----~~~~----~~~v~~t~~~G~~V 446 (448)
....+.++++++|+++|.|||+++|+++ +|+|++|+.|||||+|.+.+. .+ ..+. ..+|..||++|++|
T Consensus 358 ~~~~~~~~~~~al~~aT~~~A~~lg~~~-~G~I~~G~~ADlvvld~~~~~~~~~~d~~~~lv~~~~~~~v~~v~v~G~~v 436 (488)
T PRK06151 358 EGDLDAASAADLFDAATLGGARALGRDD-LGRLAPGAKADIVVFDLDGLHMGPVFDPIRTLVTGGSGRDVRAVFVDGRVV 436 (488)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCCC-CcccCCCCcCCEEEEeCCccccCCccCHHHHHHhhCCCCCccEEEECCEEE
Confidence 0112458999999999999999999987 799999999999999988654 22 1111 25799999999999
Q ss_pred cC
Q 013175 447 YP 448 (448)
Q Consensus 447 ~~ 448 (448)
|+
T Consensus 437 ~~ 438 (488)
T PRK06151 437 ME 438 (488)
T ss_pred EE
Confidence 84
No 10
>PRK06687 chlorohydrolase; Validated
Probab=99.96 E-value=5.5e-27 Score=235.41 Aligned_cols=290 Identities=20% Similarity=0.225 Sum_probs=196.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCc---c--hh--
Q 013175 107 PEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE---T--WS-- 179 (448)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~---~--~~-- 179 (448)
..+++++.+...+.+..++++.|||||.|+....+ .... .+++.+.+ .++|..+...+. . ..
T Consensus 94 ~~~~~~~~~~~~~~a~~e~l~~GvTTv~d~~~~~~-----~~~~---~~~~a~~~---~Gir~~~~~~~~~~~~~~~~~~ 162 (419)
T PRK06687 94 SEFTPDMTTNAVKEALTEMLQSGTTTFNDMYNPNG-----VDIQ---QIYQVVKT---SKMRCYFSPTLFSSETETTAET 162 (419)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCcceeehhhcccc-----ccHH---HHHHHHHH---hCCceEeccccccCCcccHHHH
Confidence 34677888888899999999999999999863211 1111 23333333 345665432211 0 01
Q ss_pred --hHHHHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecc
Q 013175 180 --SLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIG 257 (448)
Q Consensus 180 --~~~~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~g 257 (448)
...++.+....... ..++++.- .+.|| .++++.++++++.|+++|+++++|+.+
T Consensus 163 ~~~~~~~i~~~~~~~~-----~~i~~~~~---------~~~~~----------~~s~e~l~~~~~~A~~~g~~i~~H~~e 218 (419)
T PRK06687 163 ISRTRSIIDEILKYKN-----PNFKVMVA---------PHSPY----------SCSRDLLEASLEMAKELNIPLHVHVAE 218 (419)
T ss_pred HHHHHHHHHHHhccCC-----CceEEEEe---------CCCCC----------CCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 11122211100001 11333321 12233 467899999999999999999999987
Q ss_pred hH-HHHHHHHHHHH----hHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhh
Q 013175 258 DR-ANDLVLDMYKS----VVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERES 332 (448)
Q Consensus 258 d~-a~~~~l~a~~~----~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~ 332 (448)
+. .....++.+.+ .....+..+.+..++||..+++++++++++.|+.+++||.... .++ ...
T Consensus 219 ~~~e~~~~~~~~g~~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~la~~g~~v~~~P~sn~--------~l~-----~g~ 285 (419)
T PRK06687 219 TKEESGIILKRYGKRPLAFLEELGYLDHPSVFAHGVELNEREIERLASSQVAIAHNPISNL--------KLA-----SGI 285 (419)
T ss_pred CHHHHHHHHHHHCcCHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECcHHhh--------hhc-----cCC
Confidence 65 33444443322 2344577778999999999999999999999999999997521 233 456
Q ss_pred hhHHHHHHcCCceeecCCCCC--CCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCccccc
Q 013175 333 YLFQSLLANNALLALGSDWPV--ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLS 410 (448)
Q Consensus 333 ~~~~~~~~~Gv~v~~gSD~p~--~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~ 410 (448)
+|+++++++|+++++|||++. .+.+++..+..+....... ......++++++|+++|.|||+++|+++++|+|+
T Consensus 286 ~p~~~~~~~Gv~v~lGtD~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~aT~~gA~~lg~~~~~G~l~ 361 (419)
T PRK06687 286 APIIQLQKAGVAVGIATDSVASNNNLDMFEEGRTAALLQKMK----SGDASQFPIETALKVLTIEGAKALGMENQIGSLE 361 (419)
T ss_pred CcHHHHHHCCCeEEEeCCCCCCCCChhHHHHHHHHHHHhccc----cCCCccCCHHHHHHHHhHHHHHHcCCCCCCcccC
Confidence 899999999999999999753 3567888877653322110 0123458999999999999999999988789999
Q ss_pred CCCcccEEEecCCC-CC--Chhh----h----ccCeeeEEEECCEEecC
Q 013175 411 PGKIADFVILSTSS-WE--DFAA----E----VSASIEATYVSGVQAYP 448 (448)
Q Consensus 411 ~Gk~ADlvvld~d~-~~--~~~~----~----~~~~v~~t~~~G~~V~~ 448 (448)
+||.|||+++|.+. +. +..+ + ...+|..||++|++|++
T Consensus 362 ~G~~ADlv~~d~~~~~~~~p~~~~~~~lv~~~~~~~v~~v~v~G~~v~~ 410 (419)
T PRK06687 362 VGKQADFLVIQPQGKIHLQPQENMLSHLVYAVKSSDVDDVYIAGEQVVK 410 (419)
T ss_pred CCccCCEEEECCCCCCCcCCccCHHHHhheeCCCCCccEEEECCEEEEE
Confidence 99999999999762 22 2121 1 14579999999999974
No 11
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed
Probab=99.95 E-value=1.7e-26 Score=233.86 Aligned_cols=292 Identities=20% Similarity=0.197 Sum_probs=196.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCC----------c
Q 013175 107 PEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPL----------E 176 (448)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~----------~ 176 (448)
..+++++.+...+.+..++++.|||||.|+....+... ...+.. ..+.. .+.++|+.+.... .
T Consensus 96 ~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~-~~~~~~---~~~a~---~~~G~R~~~~~~~~~~~~~~~~~~ 168 (451)
T PRK08203 96 ARLTPEMVRVATQTALAELLLSGCTTSSDHHYLFPNGL-RDALDD---QIEAA---REIGMRFHATRGSMSLGESDGGLP 168 (451)
T ss_pred HhCCHHHHHHHHHHHHHHHHhcCcCEEEcceeeccccc-cchHHH---HHHHH---HHcCCeEEEecceeecCCccCCCC
Confidence 35688999999999999999999999999864322111 011111 22222 2355777653211 0
Q ss_pred ------chhh----HHHHHHhcCC-cCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHH
Q 013175 177 ------TWSS----LADLINKTGH-VLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASD 245 (448)
Q Consensus 177 ------~~~~----~~~~~~~~~~-~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~ 245 (448)
...+ ..++++.... ...++ +++..- | ++...++++.++++++.|+
T Consensus 169 ~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~-----i~~~~~------------~-------~~~~~~~~e~l~~~~~~A~ 224 (451)
T PRK08203 169 PDSVVEDEDAILADSQRLIDRYHDPGPGAM-----LRIALA------------P-------CSPFSVSRELMRESAALAR 224 (451)
T ss_pred ccccccCHHHHHHHHHHHHHHhcCCCCCCe-----EEEEEe------------c-------CCCCcCCHHHHHHHHHHHH
Confidence 0000 0111111000 00011 222110 1 1222467899999999999
Q ss_pred HCCCcEEEEecch-HHHHHHHHHH----HHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHH
Q 013175 246 KSGLQVAIHAIGD-RANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSAR 320 (448)
Q Consensus 246 ~~g~~v~iHa~gd-~a~~~~l~a~----~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~ 320 (448)
++|+++++|+.+. ..+...++.+ -+.....|..+.++.++||.++++++++++++.|+.+++||...
T Consensus 225 ~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~~~-------- 296 (451)
T PRK08203 225 RLGVRLHTHLAETLDEEAFCLERFGMRPVDYLEDLGWLGPDVWLAHCVHLDDAEIARLARTGTGVAHCPCSN-------- 296 (451)
T ss_pred HcCCcEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEEeCCCHHHHHHHHhcCCeEEECcHHh--------
Confidence 9999999998543 2333333322 11223457778899999999999999999999999999999752
Q ss_pred HhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCC--CCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHH
Q 013175 321 KKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAAR 398 (448)
Q Consensus 321 ~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~--~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~ 398 (448)
..+| ...+|+++++++|+++++|||++.+ ..+|+..++.++...... ...+.+++.++|+++|.|||+
T Consensus 297 ~~l~-----~~~~~~~~~~~~Gv~v~lGtD~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~l~~~T~~~A~ 366 (451)
T PRK08203 297 MRLA-----SGIAPVRELRAAGVPVGLGVDGSASNDGSNLIGEARQALLLQRLR-----YGPDAMTAREALEWATLGGAR 366 (451)
T ss_pred hhhc-----cCCCCHHHHHHCCCeEEEecCCCccCCCcCHHHHHHHHHHHhhcc-----cCCCCCCHHHHHHHHHHHHHH
Confidence 1233 3568999999999999999998753 468998888776543211 013469999999999999999
Q ss_pred HcccCCCcccccCCCcccEEEecCCCCC-----Ch-hhhc---cCeeeEEEECCEEecC
Q 013175 399 ACFLENDVGSLSPGKIADFVILSTSSWE-----DF-AAEV---SASIEATYVSGVQAYP 448 (448)
Q Consensus 399 ~~g~~~~~Gsi~~Gk~ADlvvld~d~~~-----~~-~~~~---~~~v~~t~~~G~~V~~ 448 (448)
++|++ .+|+|++||.|||||+|.+... ++ ..+. ..+|..||++|++||+
T Consensus 367 ~lg~~-~~G~l~~G~~ADlvv~d~~~~~~~~~~~p~~~l~~~~~~~v~~v~v~G~~v~~ 424 (451)
T PRK08203 367 VLGRD-DIGSLAPGKLADLALFDLDELRFAGAHDPVAALVLCGPPRADRVMVGGRWVVR 424 (451)
T ss_pred HhCCC-CCCCcCCCCccCEEEEcCCccccCCccChHHHHHccCCCCccEEEECCEEEEE
Confidence 99998 5899999999999999988643 11 1221 3579999999999973
No 12
>PRK12393 amidohydrolase; Provisional
Probab=99.95 E-value=1.7e-26 Score=233.70 Aligned_cols=302 Identities=20% Similarity=0.145 Sum_probs=196.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcc---------
Q 013175 107 PEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLET--------- 177 (448)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~--------- 177 (448)
..+++++.+...+.+..++++.|||||.|+.............+. +.+. ..++++|+.+......
T Consensus 97 ~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~---~~~a---~~~~G~R~~~~~~~~~~~~~~~~~~ 170 (457)
T PRK12393 97 ARFDEDLFRLAARIGLVELLRSGCTTVADHHYLYHPGMPFDTGDI---LFDE---AEALGMRFVLCRGGATQTRGDHPGL 170 (457)
T ss_pred hhCCHHHHHHHHHHHHHHHHhCCccEeecchhhcccccccchHHH---HHHH---HHHcCCeEEEEccccccccccCCCC
Confidence 356899999999999999999999999998532111111111121 2222 2346678765321100
Q ss_pred -----hhhHHHHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEE
Q 013175 178 -----WSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVA 252 (448)
Q Consensus 178 -----~~~~~~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~ 252 (448)
.....+....... + ++.|.++..+........|.. ....++++.++++++.|+++|++++
T Consensus 171 ~~~~~~~~~~~~l~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~------~~~~~~~e~l~~~~~~a~~~g~~~~ 235 (457)
T PRK12393 171 PTALRPETLDQMLADVER-----L----VSRYHDASPDSLRRVVVAPTT------PTFSLPPELLREVARAARGMGLRLH 235 (457)
T ss_pred CCcccccCHHHHHHHHHH-----H----HHHhcCCCcCCceEEEEcCCC------CCCCcCHHHHHHHHHHHHHcCCeEE
Confidence 0011111110000 0 000111100000000011110 1135678999999999999999999
Q ss_pred EEecchH-HHHHHHHHHH----HhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhh
Q 013175 253 IHAIGDR-ANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDR 327 (448)
Q Consensus 253 iHa~gd~-a~~~~l~a~~----~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r 327 (448)
+|+.+.. .++..++.+. +.....+..+.++.++||.++++++++++++.|+.+++||... .++|
T Consensus 236 ~H~~e~~~~~~~~~~~~g~~~~~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn--------~~lg--- 304 (457)
T PRK12393 236 SHLSETVDYVDFCREKYGMTPVQFVAEHDWLGPDVWFAHLVKLDAEEIALLAQTGTGIAHCPQSN--------GRLG--- 304 (457)
T ss_pred EEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECchhh--------hhhc---
Confidence 9997532 2333322221 1123345567788999999999999999999999999999752 2344
Q ss_pred hhhhhhhHHHHHHcCCceeecCCCCC--CCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCC
Q 013175 328 AERESYLFQSLLANNALLALGSDWPV--ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEND 405 (448)
Q Consensus 328 ~~~~~~~~~~~~~~Gv~v~~gSD~p~--~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~ 405 (448)
...+|+++++++|+++++|||++. ...|||..++.++.+.... ...+.++++++++++|.|||+++|+++
T Consensus 305 --~g~~~~~~~~~~Gv~v~lGtD~~~~~~~~d~~~~~~~a~~~~~~~-----~~~~~~~~~~~l~~~T~~~A~~l~~~~- 376 (457)
T PRK12393 305 --SGIAPALAMEAAGVPVSLGVDGAASNESADMLSEAHAAWLLHRAE-----GGADATTVEDVVHWGTAGGARVLGLDA- 376 (457)
T ss_pred --ccCCCHHHHHHCCCeEEEecCCcccCCCccHHHHHHHHHHHhhhc-----CCCCCCCHHHHHHHHhHHHHHHhCCCC-
Confidence 346899999999999999999864 3578999998876554211 123469999999999999999999975
Q ss_pred cccccCCCcccEEEecCCCCC-C----hh-----hhccCeeeEEEECCEEecC
Q 013175 406 VGSLSPGKIADFVILSTSSWE-D----FA-----AEVSASIEATYVSGVQAYP 448 (448)
Q Consensus 406 ~Gsi~~Gk~ADlvvld~d~~~-~----~~-----~~~~~~v~~t~~~G~~V~~ 448 (448)
+|+|++|+.|||+|+|.+... . +. .....+|..||++|++||+
T Consensus 377 ~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 429 (457)
T PRK12393 377 IGTLAVGQAADLAIYDLDDPRFFGLHDPAIAPVACGGPAPVKALLVNGRPVVE 429 (457)
T ss_pred CCCcCCCCcCCEEEEeCCCcccCCCCCchhhhhccCCCCCeeEEEECCEEEEE
Confidence 899999999999999988532 1 11 1124579999999999873
No 13
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.95 E-value=1.8e-26 Score=225.89 Aligned_cols=266 Identities=21% Similarity=0.155 Sum_probs=180.8
Q ss_pred CHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCC-eeEEEEccCC-------------
Q 013175 110 SVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKM-KIRVCLFFPL------------- 175 (448)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~irv~~~~~~------------- 175 (448)
+.+..........+.++++|||||+||+...+ . . +++..+++.. ..|++.....
T Consensus 36 ~~~~~~~~~~~~~~~~l~~GvTtv~d~g~~~~---------~-~--~~~~~~~g~~~gPr~~~~G~~~~~~~~~~~~~~~ 103 (342)
T cd01299 36 PVEYRTIRATRQARAALRAGFTTVRDAGGADY---------G-L--LRDAIDAGLIPGPRVFASGRALSQTGGHGDPRGL 103 (342)
T ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEeCCCcch---------H-H--HHHHHHcCCccCCceeecchhhcccCCCCccccc
Confidence 34445556677889999999999999974211 1 1 3333344442 3455432110
Q ss_pred -------------cchhhHHHHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHH
Q 013175 176 -------------ETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTM 242 (448)
Q Consensus 176 -------------~~~~~~~~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~ 242 (448)
.+.++....++.... ...+.+|+|.+|.....+. ..+...++++.++++++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~G~~~iK~~~~g~~~~~~~-----------~~~~~~~~~e~l~~~~~ 167 (342)
T cd01299 104 SGLFPAGGLAAVVDGVEEVRAAVREQLR-----RGADQIKIMATGGVLSPGD-----------PPPDTQFSEEELRAIVD 167 (342)
T ss_pred cccccccCCcceecCHHHHHHHHHHHHH-----hCCCEEEEeccCCcCCCCC-----------CCcccCcCHHHHHHHHH
Confidence 001111111111100 1356799999986543321 12445678999999999
Q ss_pred HHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCc-------
Q 013175 243 ASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDD------- 315 (448)
Q Consensus 243 ~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~------- 315 (448)
.|+++|+++.+|+.++..++.++++ | ...|+|+..+++++++++++.|+.++.||.+....
T Consensus 168 ~A~~~g~~v~~H~~~~~~i~~~l~~--------G----~~~i~H~~~~~~~~~~~l~~~g~~~~~t~~~~~~~~~~~~~~ 235 (342)
T cd01299 168 EAHKAGLYVAAHAYGAEAIRRAIRA--------G----VDTIEHGFLIDDETIELMKEKGIFLVPTLATYEALAAEGAAP 235 (342)
T ss_pred HHHHcCCEEEEEeCCHHHHHHHHHc--------C----CCEEeecCCCCHHHHHHHHHCCcEEeCcHHHHHHHHhhcccc
Confidence 9999999999999998776655542 3 46899999999999999999999999998753210
Q ss_pred --hhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCC-C--CCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHH
Q 013175 316 --ADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-A--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALI 390 (448)
Q Consensus 316 --~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~-~--~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~ 390 (448)
......+....+. ....+++.+.++|+++++|||++. . ..+.+.++.... ..++|+.++|+
T Consensus 236 ~~~~~~~~~~~~~~~-~~~~~~~~l~~~Gv~v~~GTD~~~~~~~~~~~~~e~~~~~-------------~~~~~~~~al~ 301 (342)
T cd01299 236 GLPADSAEKVALVLE-AGRDALRRAHKAGVKIAFGTDAGFPVPPHGWNARELELLV-------------KAGGTPAEALR 301 (342)
T ss_pred CCCHHHHHHHHHHHH-HHHHHHHHHHHcCCeEEEecCCCCCCCchhHHHHHHHHHH-------------HhCCCHHHHHH
Confidence 0001111111122 456899999999999999999875 1 123344444332 23579999999
Q ss_pred HHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChh
Q 013175 391 AHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFA 429 (448)
Q Consensus 391 ~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~ 429 (448)
++|.|||+++|+++++|+|++||.|||||+|.||+.++.
T Consensus 302 ~~T~~~a~~~g~~~~~G~i~~G~~ADlvvl~~~pl~di~ 340 (342)
T cd01299 302 AATANAAELLGLSDELGVIEAGKLADLLVVDGDPLEDIA 340 (342)
T ss_pred HHHHHHHHHhCccCCcceECCCCcCCEEEECCChhhhhh
Confidence 999999999999888999999999999999999987543
No 14
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.95 E-value=4.5e-26 Score=228.09 Aligned_cols=197 Identities=23% Similarity=0.244 Sum_probs=147.2
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEecchH-HHHHHHHHH----HHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEE
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAIGDR-ANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVA 305 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~gd~-a~~~~l~a~----~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~ 305 (448)
.++++.++++++.|++ |+++++|+.+.. .+....+.+ -+.....+..+.|+.++||..+++++++++++.|+.+
T Consensus 203 ~~s~e~l~~~~~~a~~-g~~i~~H~~e~~~e~~~~~~~~g~~~i~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v 281 (418)
T cd01313 203 AVPAEQLAALAALASE-KAPVHIHLAEQPKEVDDCLAAHGRRPVELLLDHGHLDARWCLVHATHLTDNETLLLGRSGAVV 281 (418)
T ss_pred CCCHHHHHHHHHHHhc-CCceEEEeCCCHHHHHHHHHHcCCCHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCEE
Confidence 4678999999999999 999999996433 222222111 0122334667889999999999999999999999999
Q ss_pred eeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCCCCCC
Q 013175 306 SMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRI--PPGWDNAWIPSERI 383 (448)
Q Consensus 306 ~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~--~~~~~~~~~~~~~l 383 (448)
++||.+.. ++| ...+|+++++++|+++++|||++. ..+++..+..+.... .......+.+.+.+
T Consensus 282 ~~~P~sn~--------~lg-----~g~~p~~~l~~~Gv~v~lGtD~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (418)
T cd01313 282 GLCPTTEA--------NLG-----DGIFPAAALLAAGGRIGIGSDSNA-RIDLLEELRQLEYSQRLRDRARNVLATAGGS 347 (418)
T ss_pred EECCCchh--------hcc-----CCCCCHHHHHHCCCcEEEecCCCC-CcCHHHHHHHHHHHHHHHhcccccccccCCC
Confidence 99999732 244 356899999999999999999764 357887776654211 10001113345679
Q ss_pred CHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC-Ch---hhh----c----cCeeeEEEECCE
Q 013175 384 SLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DF---AAE----V----SASIEATYVSGV 444 (448)
Q Consensus 384 s~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~-~~---~~~----~----~~~v~~t~~~G~ 444 (448)
++.++|+++|.|+|+++|++ +|+|++||.|||||+|.+... .+ ++. . ...|..|||+|+
T Consensus 348 ~~~~~l~~~T~~gA~alg~~--~Gsle~Gk~ADlvvld~~~~~~~p~~~~~~~~~lv~~~~~~~V~~v~V~G~ 418 (418)
T cd01313 348 SARALLDAALAGGAQALGLA--TGALEAGARADLLSLDLDHPSLAGALPDTLLDAWVFAAGDREVRDVVVGGR 418 (418)
T ss_pred CHHHHHHHHHHHHHHHhCCC--CCeECCCCccCEEEEcCCCccccCCCchhHHHHHeecCCCCceeEEEeCCC
Confidence 99999999999999999997 899999999999999987433 22 221 1 346999999996
No 15
>PRK06038 N-ethylammeline chlorohydrolase; Provisional
Probab=99.95 E-value=6.7e-26 Score=227.79 Aligned_cols=290 Identities=18% Similarity=0.224 Sum_probs=194.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCC-c--chhhHH
Q 013175 106 IPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPL-E--TWSSLA 182 (448)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~-~--~~~~~~ 182 (448)
...+++++.+...+.+..++++.|+|||.|+... + .. +.+... +.++|.++.... . ......
T Consensus 90 ~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~-~--------~~---~~~a~~---~~GiR~~~~~~~~d~~~~~~~~ 154 (430)
T PRK06038 90 EAKLTAEDVYAGSLLACLEMIKSGTTSFADMYFY-M--------DE---VAKAVE---ESGLRAALSYGMIDLGDDEKGE 154 (430)
T ss_pred hhcCCHHHHHHHHHHHHHHHHhcCceeEEccccC-H--------HH---HHHHHH---HhCCeEEEEchhccCCCccchH
Confidence 3457888888888889999999999999998531 0 11 222222 235676543221 1 001111
Q ss_pred HHHHhcCCcCCCCee--eCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHH
Q 013175 183 DLINKTGHVLSDWVY--LGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRA 260 (448)
Q Consensus 183 ~~~~~~~~~~~~~~~--~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a 260 (448)
+.++........+.. .+.++... .| .+...++++.|+++++.|+++|+++++|+.++..
T Consensus 155 ~~l~~~~~~i~~~~~~~~g~v~~~~------------~~-------~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~ 215 (430)
T PRK06038 155 AELKEGKRFVKEWHGAADGRIKVMY------------GP-------HAPYTCSEEFLSKVKKLANKDGVGIHIHVLETEA 215 (430)
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEE------------eC-------CcCccCCHHHHHHHHHHHHHcCCcEEEEcCCCHH
Confidence 111000000000000 01111111 11 1223567899999999999999999999998765
Q ss_pred HHHHHHH-H----HHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhH
Q 013175 261 NDLVLDM-Y----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLF 335 (448)
Q Consensus 261 ~~~~l~a-~----~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~ 335 (448)
....+.. + -+.....+..+.|+.++||..+++++++++++.|+.+++||.+.. .++ ...+|+
T Consensus 216 ~~~~~~~~~G~~~i~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~v~~~P~~n~--------~~~-----~~~~p~ 282 (430)
T PRK06038 216 ELNQMKEQYGMCSVNYLDDIGFLGPDVLAAHCVWLSDGDIEILRERGVNVSHNPVSNM--------KLA-----SGIAPV 282 (430)
T ss_pred HHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHhcCCEEEEChHHhh--------hhc-----cCCCCH
Confidence 4332222 1 012244567788999999999999999999999999999997622 222 346799
Q ss_pred HHHHHcCCceeecCCCCC--CCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCC
Q 013175 336 QSLLANNALLALGSDWPV--ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGK 413 (448)
Q Consensus 336 ~~~~~~Gv~v~~gSD~p~--~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk 413 (448)
++++++|+++++|||++. ...|+|..|+.++.+.... .....+++++++|+++|.|||+++|++ .|+|++|+
T Consensus 283 ~~~~~~Gv~v~lGtD~~~~~~~~d~~~~~~~a~~~~~~~----~~~~~~~~~~~al~~aT~~gA~~lg~~--~G~l~~G~ 356 (430)
T PRK06038 283 PKLLERGVNVSLGTDGCASNNNLDMFEEMKTAALLHKVN----TMDPTALPARQVLEMATVNGAKALGIN--TGMLKEGY 356 (430)
T ss_pred HHHHHCCCeEEEeCCCCccCCCcCHHHHHHHHHHHhhhc----cCCCCcCCHHHHHHHHhHHHHHHhCCC--CCccCCCc
Confidence 999999999999999754 3578999998876544321 012356899999999999999999996 69999999
Q ss_pred cccEEEecCCC-----CCCh-hhh----ccCeeeEEEECCEEecC
Q 013175 414 IADFVILSTSS-----WEDF-AAE----VSASIEATYVSGVQAYP 448 (448)
Q Consensus 414 ~ADlvvld~d~-----~~~~-~~~----~~~~v~~t~~~G~~V~~ 448 (448)
.||||++|.+. ..++ ..+ ...+|..||++|++||.
T Consensus 357 ~ADlvvld~~~~~~~p~~~~~~~~v~~~~~~~v~~v~v~G~~v~~ 401 (430)
T PRK06038 357 LADIIIVDMNKPHLTPVRDVPSHLVYSASGSDVDTTIVDGRILME 401 (430)
T ss_pred ccCEEEEeCCCCccCCCCChHHheeEeCCCCceeEEEECCEEEEE
Confidence 99999999883 2222 223 13479999999999873
No 16
>PRK09228 guanine deaminase; Provisional
Probab=99.95 E-value=9.9e-26 Score=226.34 Aligned_cols=198 Identities=24% Similarity=0.301 Sum_probs=154.8
Q ss_pred CCCHHHHHHHHHHHHHC-CCcEEEEecchH-HHHHHHHHH------HHhHHhcCCCCCCCeEEecccCChhhHHHHHhCC
Q 013175 231 VMELESLLSMTMASDKS-GLQVAIHAIGDR-ANDLVLDMY------KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQG 302 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~-g~~v~iHa~gd~-a~~~~l~a~------~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~g 302 (448)
..+++.++++.+.|+++ |+++++|..+.. ......+.+ .+.....|..+.++.+.||..+++++++++++.|
T Consensus 207 t~s~~~l~~~~~lA~~~~~~~i~~Hl~E~~~e~~~~~~~~g~~~~~~~~l~~~G~l~~~~~~~H~~~l~~~~~~~la~~g 286 (433)
T PRK09228 207 TSTPEQLEAAGALAREHPDVWIQTHLSENLDEIAWVKELFPEARDYLDVYERYGLLGPRAVFAHCIHLEDRERRRLAETG 286 (433)
T ss_pred cCCHHHHHHHHHHHHHCCCCceEEeecCChhHHHHHHHHcCCCCCHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcC
Confidence 35688999999999997 999999996533 233333321 2223445777889999999999999999999999
Q ss_pred cEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCC-CCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 013175 303 IVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-ADINPLCAIRTAMKRIPPGWDNAWIPSE 381 (448)
Q Consensus 303 v~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~-~~~~p~~~~~~a~~r~~~~~~~~~~~~~ 381 (448)
+.+++||.+.. .+| ...+|++.++++|+++++|||.+. .+.+++..|..+...... ...
T Consensus 287 ~~v~~~P~sn~--------~lg-----~g~~~~~~~~~~Gv~v~lGtD~~~~~~~d~~~~~~~~~~~~~~-------~~~ 346 (433)
T PRK09228 287 AAIAFCPTSNL--------FLG-----SGLFDLKRADAAGVRVGLGTDVGGGTSFSMLQTMNEAYKVQQL-------QGY 346 (433)
T ss_pred CeEEECCccHH--------hhc-----CCCcCHHHHHHCCCeEEEecCCCCCCCCCHHHHHHHHHHHhhc-------ccC
Confidence 99999998621 233 356899999999999999999864 367899888877543221 234
Q ss_pred CCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC--Ch--------hh----hc----cCeeeEEEECC
Q 013175 382 RISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--DF--------AA----EV----SASIEATYVSG 443 (448)
Q Consensus 382 ~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~--~~--------~~----~~----~~~v~~t~~~G 443 (448)
.++++++|+++|.|||+++|+++.+|+|++||.||||++|.+... .+ .+ +. ...|..|||+|
T Consensus 347 ~~~~~~~l~~aT~~~A~~lg~~~~~G~l~~Gk~ADlvv~d~~~~~~~~~~~~~~~~~~d~~~~lv~~~~~~~V~~v~VdG 426 (433)
T PRK09228 347 RLSPFQAFYLATLGGARALGLDDRIGNLAPGKEADFVVLDPAATPLLALRTARAESLEELLFALMTLGDDRAVAETYVAG 426 (433)
T ss_pred CCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCCCCEEEEcCCCCccccchhcccCCHHHHHHHHhhcCCccceeEEEECC
Confidence 589999999999999999999877899999999999999987521 11 11 11 35799999999
Q ss_pred EEecC
Q 013175 444 VQAYP 448 (448)
Q Consensus 444 ~~V~~ 448 (448)
++|++
T Consensus 427 ~~v~~ 431 (433)
T PRK09228 427 RPVYR 431 (433)
T ss_pred EEecc
Confidence 99974
No 17
>cd01303 GDEase Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.
Probab=99.95 E-value=1e-25 Score=226.35 Aligned_cols=199 Identities=21% Similarity=0.225 Sum_probs=152.6
Q ss_pred CCCHHHHHHHHHHHHHCC-CcEEEEecchH-HHHHHHHHHH------HhHHhcCCCCCCCeEEecccCChhhHHHHHhCC
Q 013175 231 VMELESLLSMTMASDKSG-LQVAIHAIGDR-ANDLVLDMYK------SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQG 302 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g-~~v~iHa~gd~-a~~~~l~a~~------~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~g 302 (448)
..+++.++++++.|+++| +++++|+.+.. .++.+...+. +.....|..+.+..++||.++++++++++++.|
T Consensus 204 ~~s~e~l~~~~~~A~~~g~~~v~~H~~e~~~e~~~~~~~~g~~~~p~~~l~~~G~l~~~~~l~H~~~l~~~~~~~l~~~g 283 (429)
T cd01303 204 SCSEELLAALGKLAKEHPDLHIQTHISENLDEIAWVKELFPGARDYLDVYDKYGLLTEKTVLAHCVHLSEEEFNLLKERG 283 (429)
T ss_pred cCCHHHHHHHHHHHHHCCCCeEEEeeCCCHHHHHHHHHHcCCCCCHHHHHHHCCCCCCCcEEEeCCCCCHHHHHHHHHcC
Confidence 457899999999999999 99999996533 2333332211 223445667789999999999999999999999
Q ss_pred cEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCC-CCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 013175 303 IVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-ADINPLCAIRTAMKRIPPGWDNAWIPSE 381 (448)
Q Consensus 303 v~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~-~~~~p~~~~~~a~~r~~~~~~~~~~~~~ 381 (448)
+.+++||.+.. .++ ...+|+++++++|+++++|||++. .+.+|+..++.++.+..... ....+..
T Consensus 284 ~~v~~~P~sn~--------~l~-----~g~~~~~~~~~~Gv~v~lGtD~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~ 349 (429)
T cd01303 284 ASVAHCPTSNL--------FLG-----SGLFDVRKLLDAGIKVGLGTDVGGGTSFSMLDTLRQAYKVSRLLG-YELGGHA 349 (429)
T ss_pred CEEEECccchh--------hhc-----cCCCCHHHHHHCCCeEEEeccCCCCCCccHHHHHHHHHHHHHhhc-cccCCcC
Confidence 99999998632 233 356799999999999999999864 35789999887765432100 0112345
Q ss_pred CCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC-C-h--------hhh----c----cCeeeEEEECC
Q 013175 382 RISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-D-F--------AAE----V----SASIEATYVSG 443 (448)
Q Consensus 382 ~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~-~-~--------~~~----~----~~~v~~t~~~G 443 (448)
+++++++|+++|.|||+++|+++++|+|++||.|||||+|.++.. . | .+. . ...|..|||+|
T Consensus 350 ~~~~~~al~~aT~~gA~~lg~~~~~Gsle~Gk~ADlvvld~~~~~~~~p~~~~~~~~~d~~~~lV~~~~~~~V~~v~V~G 429 (429)
T cd01303 350 KLSPAEAFYLATLGGAEALGLDDKIGNFEVGKEFDAVVIDPSATPLLADRMFRVESLEEALFKFLYLGDDRNIREVYVAG 429 (429)
T ss_pred CCCHHHHHHHHhhHHHHHcCCCCCCcCcCCCCccCEEEEcCCCccccccccccccchhhHHHHHeeeCCCCCeeEEEeCC
Confidence 789999999999999999999888999999999999999988642 2 2 122 1 35699999998
No 18
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional
Probab=99.95 E-value=2e-25 Score=224.43 Aligned_cols=288 Identities=17% Similarity=0.155 Sum_probs=194.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCC------cchhh
Q 013175 107 PEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPL------ETWSS 180 (448)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~------~~~~~ 180 (448)
..+++++.+...+.+..++++.||||+.|+...... ... .+.+.+. +.++|.++.... .....
T Consensus 95 ~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~-----~~~---~~~~a~~---~~GiR~~~~~~~~~~~~~~~~~~ 163 (435)
T PRK15493 95 SQFTPELAVASTELGLLEMVKSGTTSFSDMFNPIGV-----DQD---AIMETVS---RSGMRAAVSRTLFSFGTKEDEKK 163 (435)
T ss_pred hcCCHHHHHHHHHHHHHHHHhCCccEEEcccccccc-----CHH---HHHHHHH---HcCCcEEEeeeecCCCCCccHHH
Confidence 456788888999999999999999999998632110 001 1222222 356787553211 11011
Q ss_pred -HHH---HHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEec
Q 013175 181 -LAD---LINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAI 256 (448)
Q Consensus 181 -~~~---~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~ 256 (448)
+.+ +.+.... .+++ ++... ..+.|| .++++.++++++.|+++|+++++|+.
T Consensus 164 ~~~~~~~~~~~~~~-~~~~-----i~~~~---------~~~~~~----------t~s~e~l~~~~~~A~~~g~~v~~H~~ 218 (435)
T PRK15493 164 AIEEAEKYVKRYYN-ESGM-----LTTMV---------APHSPY----------TCSTELLEECARIAVENQTMVHIHLS 218 (435)
T ss_pred HHHHHHHHHHHhcC-CCCC-----eEEEE---------eCCCCC----------cCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 111 1111000 0011 22211 112344 35789999999999999999999997
Q ss_pred chHH-HHHHHHHH----HHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhh
Q 013175 257 GDRA-NDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERE 331 (448)
Q Consensus 257 gd~a-~~~~l~a~----~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~ 331 (448)
+... ++...+.+ -+.....|..+.++.++||.++++++++++++.|+.+++||.+.. .++ ..
T Consensus 219 e~~~e~~~~~~~~g~~~~~~l~~~Gll~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~--------~l~-----~g 285 (435)
T PRK15493 219 ETEREVRDIEAQYGKRPVEYAASCGLFKRPTVIAHGVVLNDNERAFLAEHDVRVAHNPNSNL--------KLG-----SG 285 (435)
T ss_pred CCHHHHHHHHHHhCCCHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCeEEEChHHHH--------HHh-----cC
Confidence 6543 22222211 122334577788999999999999999999999999999998621 233 45
Q ss_pred hhhHHHHHHcCCceeecCCCCCC--CCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccc
Q 013175 332 SYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSL 409 (448)
Q Consensus 332 ~~~~~~~~~~Gv~v~~gSD~p~~--~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi 409 (448)
.+|+++++++|+++++|||++.+ +.++|.+|+.+...... .......++++++|+++|.|||+++|+++ +|+|
T Consensus 286 ~~p~~~~~~~Gv~v~lGtD~~~~~~~~d~~~~~~~a~~~~~~----~~~~~~~~~~~~~l~~aT~~gA~~lg~~~-~G~l 360 (435)
T PRK15493 286 IANVKAMLEAGIKVGIATDSVASNNNLDMFEEMRIATLLQKG----IHQDATALPVETALTLATKGAAEVIGMKQ-TGSL 360 (435)
T ss_pred cccHHHHHHCCCeEEEccCccccCCCcCHHHHHHHHHHHHhh----ccCCCCcCCHHHHHHHHhHHHHHHcCCCC-CCcc
Confidence 78999999999999999998543 56889998876543321 01123469999999999999999999975 8999
Q ss_pred cCCCcccEEEecCC-CCC--Chhh----hc----cCeeeEEEECCEEecC
Q 013175 410 SPGKIADFVILSTS-SWE--DFAA----EV----SASIEATYVSGVQAYP 448 (448)
Q Consensus 410 ~~Gk~ADlvvld~d-~~~--~~~~----~~----~~~v~~t~~~G~~V~~ 448 (448)
++||.||||++|.+ ... +..+ +. ...|..||++|++|++
T Consensus 361 ~~G~~ADlvv~d~~~~~~~~p~~d~~~~lv~~~~~~~V~~v~V~G~~v~~ 410 (435)
T PRK15493 361 EVGKCADFITIDPSNKPHLQPADEVLSHLVYAASGKDISDVIINGKRVVW 410 (435)
T ss_pred CCCCcCCEEEEcCCCCCCcCCccChHHhEEEeCCCCCccEEEECCEEEEE
Confidence 99999999999964 222 1122 11 3469999999999873
No 19
>PRK06380 metal-dependent hydrolase; Provisional
Probab=99.95 E-value=1.9e-25 Score=224.24 Aligned_cols=285 Identities=18% Similarity=0.169 Sum_probs=192.1
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcc--h---
Q 013175 104 PWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLET--W--- 178 (448)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~--~--- 178 (448)
.....+++++++...+.+..+++++||||+.|+... .+. +.+.+. ++++|.++...... +
T Consensus 86 ~~~~~~~~e~~~~~~~~~~~e~l~~G~Tt~~d~~~~---------~~~---~~~a~~---~~G~r~~~~~~~~~~~~~~~ 150 (418)
T PRK06380 86 KYDSKRTREGIYNSAKLGMYEMINSGITAFVDLYYS---------EDI---IAKAAE---ELGIRAFLSWAVLDEEITTQ 150 (418)
T ss_pred hhhhcCCHHHHHHHHHHHHHHHHhcCCeEEEccccC---------hHH---HHHHHH---HhCCeEEEecccccCCcccc
Confidence 334567899999999999999999999999998531 011 222222 34577766422110 0
Q ss_pred -----hhHHHHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEE
Q 013175 179 -----SSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAI 253 (448)
Q Consensus 179 -----~~~~~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~i 253 (448)
....++.+... .++. ++... +..|....+++.++++++.|+++|+++++
T Consensus 151 ~~~~~~~~~~~~~~~~--~~~~-----v~~~~-------------------~~~~~~~~s~e~l~~~~~~A~~~g~~v~~ 204 (418)
T PRK06380 151 KGDPLNNAENFIREHR--NEEL-----VTPSI-------------------GVQGIYVANDETYLKAKEIAEKYDTIMHM 204 (418)
T ss_pred cchHHHHHHHHHHHhc--CCCC-----eEEEE-------------------ECCCCccCCHHHHHHHHHHHHHcCCCEEE
Confidence 01111111100 0111 11111 01233346789999999999999999999
Q ss_pred EecchH-HHHHHHHH-----HHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhh
Q 013175 254 HAIGDR-ANDLVLDM-----YKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDR 327 (448)
Q Consensus 254 Ha~gd~-a~~~~l~a-----~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r 327 (448)
|+.+.. .+...... ++. ....+..+.+..+.||.++++++++++++.|+.+++||.+. .+++.
T Consensus 205 H~~e~~~~~~~~~~~~g~~~ie~-~~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn--------~~l~~-- 273 (418)
T PRK06380 205 HLSETRKEVYDHVKRTGERPVEH-LEKIGFLNSKLIAAHCVWATYHEIKLLSKNGVKVSWNSVSN--------FKLGT-- 273 (418)
T ss_pred EeCCcHHHHHHHHHHhCCCHHHH-HHHCCCCCCCeEEEEeecCCHHHHHHHHHcCCEEEECHHHH--------Hhhcc--
Confidence 998753 22211111 111 22345567789999999999999999999999999999862 12332
Q ss_pred hhhhhhhHHHHHHcCCceeecCCCCCC--CCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCC
Q 013175 328 AERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEND 405 (448)
Q Consensus 328 ~~~~~~~~~~~~~~Gv~v~~gSD~p~~--~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~ 405 (448)
...+|+++++++|+++++|||++.+ +.+++..++.+...... ..+. ...++++++|+++|.|+|+++|++
T Consensus 274 --~g~~p~~~~~~~Gv~v~lGTD~~~~~~~~d~~~~~~~~~~~~~~---~~~~-~~~~~~~~~l~~aT~~gA~~lg~~-- 345 (418)
T PRK06380 274 --GGSPPIPEMLDNGINVTIGTDSNGSNNSLDMFEAMKFSALSVKN---ERWD-ASIIKAQEILDFATINAAKALELN-- 345 (418)
T ss_pred --CCCCcHHHHHHCCCeEEEcCCCCcCCCCcCHHHHHHHHHHHhhh---ccCC-CCcCCHHHHHHHHHHHHHHHhCCC--
Confidence 2467999999999999999998643 56888888876432211 0111 225899999999999999999994
Q ss_pred cccccCCCcccEEEecCCCC-CCh-------hhhc----cCeeeEEEECCEEecC
Q 013175 406 VGSLSPGKIADFVILSTSSW-EDF-------AAEV----SASIEATYVSGVQAYP 448 (448)
Q Consensus 406 ~Gsi~~Gk~ADlvvld~d~~-~~~-------~~~~----~~~v~~t~~~G~~V~~ 448 (448)
.|+|++||.||||++|.+.. ..| ..+. ..+|..||++|++|++
T Consensus 346 ~G~l~~G~~ADlvv~d~~~~~~~p~~~~~~~~~lv~~~~~~~v~~v~v~G~~v~~ 400 (418)
T PRK06380 346 AGSIEVGKLADLVILDARAPNMIPTRKNNIVSNIVYSLNPLNVDHVIVNGKILKE 400 (418)
T ss_pred CCccCCCccCCEEEEeCCCCccCCCCccChHHheeecCCCCceeEEEECCEEEEE
Confidence 79999999999999998732 222 1221 3479999999999873
No 20
>TIGR02967 guan_deamin guanine deaminase. This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.
Probab=99.94 E-value=2.4e-25 Score=222.41 Aligned_cols=193 Identities=24% Similarity=0.310 Sum_probs=150.4
Q ss_pred CCCHHHHHHHHHHHHHC-CCcEEEEecc-hHHHHHHHHHH------HHhHHhcCCCCCCCeEEecccCChhhHHHHHhCC
Q 013175 231 VMELESLLSMTMASDKS-GLQVAIHAIG-DRANDLVLDMY------KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQG 302 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~-g~~v~iHa~g-d~a~~~~l~a~------~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~g 302 (448)
.++++.|+++++.|+++ |+++++|+.+ ...++..++.+ -+.....|..+.++.++||..+++++++++++.|
T Consensus 182 ~~s~e~l~~~~~~A~~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~~~l~~~g~lg~~~~~~H~~~~~~~~~~~l~~~g 261 (401)
T TIGR02967 182 TSSPEQLAAAGELAKEYPDVYVQTHLSENKDEIAWVKELFPEAKDYLDVYDHYGLLGRRSVFAHCIHLSDEECQRLAETG 261 (401)
T ss_pred cCcHHHHHHHHHHHHhCCCCeeEEEECCCchHHHHHHHHcCCCCcHHHHHHHCCCCCCCeEEEecccCCHHHHHHHHHcC
Confidence 46789999999999999 9999999964 34444444331 1223445777789999999999999999999999
Q ss_pred cEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCC-CCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 013175 303 IVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-ADINPLCAIRTAMKRIPPGWDNAWIPSE 381 (448)
Q Consensus 303 v~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~-~~~~p~~~~~~a~~r~~~~~~~~~~~~~ 381 (448)
+.+++||.+.. .++ ...+|++.++++|+++++|||++. ...+++..+..++..... ...
T Consensus 262 ~~v~~~P~~~~--------~~~-----~g~~~~~~~~~~Gv~v~lGtD~~~~~~~~~~~~~~~~~~~~~~-------~~~ 321 (401)
T TIGR02967 262 AAIAHCPTSNL--------FLG-----SGLFNLKKALEHGVRVGLGTDVGGGTSFSMLQTLREAYKVSQL-------QGA 321 (401)
T ss_pred CeEEEChHHHH--------Hhc-----cCCCCHHHHHHCCCeEEEecCCCCCCCcCHHHHHHHHHHHhhh-------cCC
Confidence 99999998621 233 356799999999999999999864 356888888877654321 124
Q ss_pred CCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC-Ch-------------hhhc----cCeeeEEEECC
Q 013175 382 RISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DF-------------AAEV----SASIEATYVSG 443 (448)
Q Consensus 382 ~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~-~~-------------~~~~----~~~v~~t~~~G 443 (448)
.+++.++|+++|.|||+++|+++++|+|++||.||||++|.+... .+ ..+. ...|..|||+|
T Consensus 322 ~~~~~~~l~~aT~~~A~~lg~~~~~G~i~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~v~v~G 401 (401)
T TIGR02967 322 RLSPFEAFYLATLGGARALDLDDRIGNFEPGKEADFVVLDPAATPLLALRFEGADTLEDKLFKLMYLGDDRNVAETYVAG 401 (401)
T ss_pred CCCHHHHHHHHHHHHHHHhCCcCCccccCCCCccCEEEEcCCCCcccccccccccchhhHHHHheeecCccceeEEEeCC
Confidence 589999999999999999999877999999999999999976422 11 1121 34699999998
No 21
>TIGR02022 hutF formiminoglutamate deiminase. In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.
Probab=99.94 E-value=2e-25 Score=225.52 Aligned_cols=201 Identities=22% Similarity=0.222 Sum_probs=148.9
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEecch-HHHHHHHHHHH----HhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEE
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVA 305 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~gd-~a~~~~l~a~~----~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~ 305 (448)
.++++.++++.+ ++++|+++++|+.+. ..+..+.+.+. +.....|..+.++.+.||.++++++++++++.|+.+
T Consensus 212 ~~s~e~l~~~~~-a~~~g~~v~~H~~e~~~e~~~~~~~~G~~~v~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v 290 (455)
T TIGR02022 212 AVTPEQLAAVLQ-ASDRQAPVHIHVAEQQKEVDDCLAWSGRRPVEWLLDHGPVDARWCLVHATHLTDEETALLARSGAVA 290 (455)
T ss_pred cCCHHHHHHHHH-HHhCCCceEEEECCChHHHHHHHHHhCCCHHHHHHHcCCCCCCEEEEEeecCCHHHHHHHHHcCCeE
Confidence 457899999998 889999999999643 22332322211 123345677889999999999999999999999999
Q ss_pred eeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCC-CCCC
Q 013175 306 SMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPP--GWDNAWI-PSER 382 (448)
Q Consensus 306 ~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~~~--~~~~~~~-~~~~ 382 (448)
++||.+.. .+| ...+|+++++++|+++++|||++. ..+++..|+.+...+.. .....+. ....
T Consensus 291 ~~~P~sn~--------~lg-----~g~~pi~~l~~~Gv~v~lGTD~~~-~~d~~~~m~~a~~~~~~~~~~~~~~~~~~~~ 356 (455)
T TIGR02022 291 GLCPTTEA--------NLG-----DGIFPAVDFVAAGGRFGIGSDSHV-VIDVAEELRQLEYGQRLRDRARNVLAAGPGP 356 (455)
T ss_pred EEChhhhc--------ccc-----CCCCCHHHHHHCCCeEEEECCCCC-CCCHHHHHHHHHHHHHHHhcccccccCCccc
Confidence 99998732 244 356899999999999999999743 56888888876433211 0001111 1235
Q ss_pred CCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCC-CCC-C--hhhh----c----cCeeeEEEECCEEecC
Q 013175 383 ISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTS-SWE-D--FAAE----V----SASIEATYVSGVQAYP 448 (448)
Q Consensus 383 ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d-~~~-~--~~~~----~----~~~v~~t~~~G~~V~~ 448 (448)
++.+++|+++|.|+|+++|++ .|+|++||.|||||+|.+ +.. + ++++ . ...|..||++|++||+
T Consensus 357 ~~~~~~l~~aT~~gAralg~~--~GsLe~Gk~ADlvvld~~~~~~~~~~~~~~~~~lv~~~~~~~V~~v~V~G~~v~~ 432 (455)
T TIGR02022 357 SVGRALYDAALLGGAQALGLA--TGGLRAGARADFLTLDGDHPYLAGALGDSLLDRWLFAGGGAAVRDVWVGGRWVVR 432 (455)
T ss_pred chHHHHHHHHHHHHHHHhCCC--CCccCCCCCcCEEEEeCCCcccCCCCchhHHHHHhhcCCCCCccEEEECCEEEEE
Confidence 788899999999999999994 899999999999999987 322 2 1222 1 3579999999999973
No 22
>PRK09356 imidazolonepropionase; Validated
Probab=99.94 E-value=2.3e-25 Score=223.09 Aligned_cols=188 Identities=24% Similarity=0.183 Sum_probs=146.1
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccc
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQ 310 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~ 310 (448)
.+++++++++++.|+++|+++++|+.+..... .++... ..+ +..+.|+.++++++++++++.|+.+++||.
T Consensus 218 ~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~----~~~~~~-~~~----~~~~~H~~~~~~~~~~~la~~g~~~~~~P~ 288 (406)
T PRK09356 218 AFSVEQSERVLEAAKALGLPVKIHAEQLSNLG----GAELAA-EYG----ALSADHLEYLDEAGIAAMAEAGTVAVLLPG 288 (406)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEecccCCC----HHHHHH-HcC----CcEehHhhcCCHHHHHHHHHhCCEEEECcc
Confidence 35789999999999999999999997532111 111111 122 567999999999999999999999999998
Q ss_pred cccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHH
Q 013175 311 HLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALI 390 (448)
Q Consensus 311 ~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~ 390 (448)
+.. .++. ...+|+++++++|+++++|||++. ..+|+..++..+.... ...+++++++|+
T Consensus 289 ~~~--------~l~~----~~~~~~~~l~~~Gi~v~lgtD~~~-~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~ 347 (406)
T PRK09356 289 AFY--------FLRE----TQYPPARLLRDAGVPVALATDFNP-GSSPTESLLLAMNMAC--------TLFRLTPEEALA 347 (406)
T ss_pred chh--------hcCc----ccCchHHHHHHCCCeEEEeCCCCC-CCChhHHHHHHHHHHh--------hhcCCCHHHHHH
Confidence 732 1221 235789999999999999999842 1456766666553210 134689999999
Q ss_pred HHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC-ChhhhccCeeeEEEECCEEecC
Q 013175 391 AHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVSASIEATYVSGVQAYP 448 (448)
Q Consensus 391 ~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~-~~~~~~~~~v~~t~~~G~~V~~ 448 (448)
++|.|||+++|+++++|+|++||.|||||+|.+++. ....+...+|..||++|++||.
T Consensus 348 ~~T~~~A~~~g~~~~~G~i~~G~~AD~vvld~~~~~~~~~~~~~~~v~~v~v~G~~vy~ 406 (406)
T PRK09356 348 AVTINAARALGRQDTHGSLEVGKKADLVIWDAPSPAELPYHFGVNPVETVVKNGEVVVD 406 (406)
T ss_pred HHHHHHHHHhCCCCCceeeCCCCcCCEEEECCCchhhhhhhhCCCCccEEEECCEEeeC
Confidence 999999999999888999999999999999999765 3333446689999999999995
No 23
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated
Probab=99.94 E-value=1.6e-24 Score=218.91 Aligned_cols=301 Identities=14% Similarity=0.084 Sum_probs=194.3
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcc---hh
Q 013175 103 LPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLET---WS 179 (448)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~---~~ 179 (448)
++....+++++++...+.+..++++.|+||+.|+........ .... .+.+.. .+.++|.++.....+ ..
T Consensus 95 ~~~~~~~t~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~--~~~~---~~~~a~---~~~GiR~~~~~~~~d~~~~~ 166 (442)
T PRK07203 95 WRLDRALTLEDVYYSALICSLEAIKNGVTTVFDHHASPNYIG--GSLF---TIADAA---KKVGLRAMLCYETSDRDGEK 166 (442)
T ss_pred ehhhhcCCHHHHHHHHHHHHHHHHHcCceEEEcccccccccc--chHH---HHHHHH---HHhCCeEEEecccccCCcch
Confidence 344456789999988899999999999999999853211110 1111 122222 245678766432211 11
Q ss_pred hHHHHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchH
Q 013175 180 SLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDR 259 (448)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~ 259 (448)
...+........ +..++...++.+ .... +.++....+++.++++.+.|+++|+++++|..+..
T Consensus 167 ~~~~~l~~~~~~------~~~~~~~~~~~v----~~~~-------~p~~~~~~s~~~l~~~~~lA~~~g~~i~~H~~E~~ 229 (442)
T PRK07203 167 ELQEGVEENIRF------IKHIDEAKDDMV----EAMF-------GLHASFTLSDATLEKCREAVKETGRGYHIHVAEGI 229 (442)
T ss_pred hHHHHHHHHHHH------HHHhcCCCCCce----EEEE-------ccCCCcCcCHHHHHHHHHHHHHcCCcEEEEecCCh
Confidence 111111110000 000110000000 0000 11222345789999999999999999999997543
Q ss_pred -HHHHHHHHH----HHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhh
Q 013175 260 -ANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYL 334 (448)
Q Consensus 260 -a~~~~l~a~----~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~ 334 (448)
.....++.+ -+.....|..+.+..+.||..+++++++++++.|+.+++||.+.. .++ .+.+|
T Consensus 230 ~e~~~~~~~~g~~~v~~l~~~Gll~~~~~~~H~~~~~~~d~~~la~~g~~v~~~P~sn~--------~l~-----~g~~p 296 (442)
T PRK07203 230 YDVSDSHKKYGKDIVERLADFGLLGEKTLAAHCIYLSDEEIDLLKETDTFVVHNPESNM--------GNA-----VGYNP 296 (442)
T ss_pred HHHHHHHHHcCCCHHHHHHhCCCCCCCcEEEEeecCCHHHHHHHHhcCCeEEECchhhh--------hcc-----cCCCC
Confidence 233333311 122344577788999999999999999999999999999998621 233 45789
Q ss_pred HHHHHHcCCceeecCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcc--cCCCcccccCC
Q 013175 335 FQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACF--LENDVGSLSPG 412 (448)
Q Consensus 335 ~~~~~~~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g--~~~~~Gsi~~G 412 (448)
+++++++|+++++|||+. ..|+|..+..+....... .....++.+++++++|.|||+++| ++++.|+|++|
T Consensus 297 ~~~~~~~Gv~v~lGtD~~--~~d~~~~~~~a~~~~~~~-----~~~~~~~~~~~~~~aT~~gA~~lg~~~~~~~G~l~~G 369 (442)
T PRK07203 297 VLEMIKNGILLGLGTDGY--TSDMFESYKVANFKHKHA-----GGDPNVGWPESPAMLFENNNKIAERYFGAKFGILEEG 369 (442)
T ss_pred HHHHHHCCCeEEEcCCCC--CccHHHHHHHHHHHhccc-----cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 999999999999999974 458898888764322110 011124678999999999999999 45568999999
Q ss_pred CcccEEEecCCCCC-Ch-h----hhc----cCeeeEEEECCEEecC
Q 013175 413 KIADFVILSTSSWE-DF-A----AEV----SASIEATYVSGVQAYP 448 (448)
Q Consensus 413 k~ADlvvld~d~~~-~~-~----~~~----~~~v~~t~~~G~~V~~ 448 (448)
|.||||++|.+... .+ . .+. ...|..||++|++||+
T Consensus 370 ~~ADlvv~d~~~~~~~~~~~~~~~~v~~~~~~~v~~v~v~G~~v~~ 415 (442)
T PRK07203 370 AKADLIIVDYNPPTPLNEDNINGHILFGMNGGSVDTTIVNGKVVME 415 (442)
T ss_pred CccCEEEEcCCCCeecCccccccceEeecCCCceEEEEECCEEEEE
Confidence 99999999976432 11 1 121 4679999999999973
No 24
>PLN02942 dihydropyrimidinase
Probab=99.94 E-value=5e-26 Score=231.56 Aligned_cols=301 Identities=17% Similarity=0.138 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcchh--hHHHHHHhcCCcC
Q 013175 115 REALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWS--SLADLINKTGHVL 192 (448)
Q Consensus 115 ~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~~--~~~~~~~~~~~~~ 192 (448)
++.+.+++++++++|||||.||... ... ...+.++.++.... +..+++.++.....+. ...++......
T Consensus 76 ~ed~~s~s~aAl~gGvTTv~D~~~~--~~~---~~~~~~~~~~~~~~--~~~~d~~~~~~~~~~~~~~~~e~~~l~~~-- 146 (486)
T PLN02942 76 IDDFFSGQAAALAGGTTMHIDFVIP--VNG---NLLAGYEAYEKKAE--KSCMDYGFHMAITKWDDTVSRDMETLVKE-- 146 (486)
T ss_pred cchHHHHHHHHHcCCCeEEEeCCCC--CCC---CHHHHHHHHHHHHh--hcCCCEEEEEEecCCcHhHHHHHHHHHHh--
Confidence 5678889999999999999999532 111 11222222222222 2345655443221111 11222111000
Q ss_pred CCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHH------
Q 013175 193 SDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLD------ 266 (448)
Q Consensus 193 ~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~------ 266 (448)
..+.++|+|++.. +....+++.+.+.++.+++.|.++++|++....+....+
T Consensus 147 ---~gv~~~k~~~~~~-------------------~~~~~~~~~l~~~~~~a~~~~~~v~~HaE~~~~~~~~~~~~~~~G 204 (486)
T PLN02942 147 ---KGINSFKFFMAYK-------------------GSLMVTDELLLEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELG 204 (486)
T ss_pred ---CCCceEEEEEecC-------------------CCCCCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHHHcC
Confidence 1235688876310 112346889999999999999999999876543332221
Q ss_pred ------------------HHHHhHHhcCCCCCCCeEEecccCCh-hhHHHHHhCC--cEEeeccccccCchhHHHH---h
Q 013175 267 ------------------MYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARK---K 322 (448)
Q Consensus 267 ------------------a~~~~~~~~~~~~~r~~i~H~~~~~~-~~i~~~~~~g--v~~~~~P~~~~~~~~~~~~---~ 322 (448)
+++++....+..+.+.+|+|++..+. ++++++++.| |++++||+|+.++.+.+.. .
T Consensus 205 ~~~~~~~~~~rP~~~E~~av~~~~~la~~~g~~~~i~H~s~~~~~e~i~~~k~~G~~Vt~e~~ph~L~l~~~~~~~~~~~ 284 (486)
T PLN02942 205 ITGPEGHALSRPPLLEGEATARAIRLAKFVNTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFT 284 (486)
T ss_pred CCChhhhhccCCchHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEECchhheeCHHHhcCcccc
Confidence 12333323344577999999999888 8898888887 6778899998877654422 1
Q ss_pred cCHhhhhhhhhhH---------HHHHHcCCceeecCCCCCCCC-------CHHHHHHHHHcCCCCCCCC---CCCCCCCC
Q 013175 323 LGVDRAERESYLF---------QSLLANNALLALGSDWPVADI-------NPLCAIRTAMKRIPPGWDN---AWIPSERI 383 (448)
Q Consensus 323 ~g~~r~~~~~~~~---------~~~~~~Gv~v~~gSD~p~~~~-------~p~~~~~~a~~r~~~~~~~---~~~~~~~l 383 (448)
++. .+ +.++|+ ..+++.|+++++|||+...+. ++|..+..++......... .+.....+
T Consensus 285 ~~~-~~-k~~PPlr~~~~~~~L~~~l~~G~i~~igTDh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~i 362 (486)
T PLN02942 285 IAS-KY-VMSPPIRPAGHGKALQAALSSGILQLVGTDHCPFNSTQKAFGKDDFRKIPNGVNGIEERMHLVWDTMVESGQI 362 (486)
T ss_pred cCc-ce-EECCCCCCHHHHHHHHHHhcCCceEEEECCCCCCChHHhhcccCCHhhCCCCcccHHHHHHHHHHHHHHcCCC
Confidence 222 12 456676 489999999999999642211 1121111100000000000 01123458
Q ss_pred CHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC--Chhhh-------------ccCeeeEEEECCEEecC
Q 013175 384 SLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--DFAAE-------------VSASIEATYVSGVQAYP 448 (448)
Q Consensus 384 s~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~--~~~~~-------------~~~~v~~t~~~G~~V~~ 448 (448)
+++++++++|.|||+++|+++++|+|++|+.||||++|.++.. ....+ ...+|..||++|++||.
T Consensus 363 ~~~~~l~~~t~~pA~~lgl~~~~G~l~~G~~ADlv~vd~~~~~~v~~~~~~s~~~~~py~g~~l~g~v~~tiv~G~~v~~ 442 (486)
T PLN02942 363 SPTDYVRVTSTECAKIFNIYPRKGAILAGSDADIIILNPNSTFTISAKTHHSRIDTNVYEGRRGKGKVEVTISQGRVVWE 442 (486)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCcCCCCcCCEEEEcCCccEEEcHHHccccCCCCCccCcEeeeeEEEEEECCEEEEE
Confidence 9999999999999999999777899999999999999988654 22221 13579999999999973
No 25
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.94 E-value=1.3e-24 Score=214.32 Aligned_cols=274 Identities=16% Similarity=0.173 Sum_probs=187.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcc-----hh-hH
Q 013175 108 EVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLET-----WS-SL 181 (448)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~-----~~-~~ 181 (448)
.+++++.+...+.+..++++.||||+.|+... .. ..+.+. ++.+|.++.....+ +. ..
T Consensus 67 ~~~~e~~~~~a~~~~~E~l~~G~Tt~~d~~~~----------~~---~~~a~~---~~GiR~~~~~~~~~~~~~~~~~~~ 130 (381)
T cd01312 67 ELLKQPWEEAIRQGIRQMLESGTTSIGAISSD----------GS---LLPALA---SSGLRGVFFNEVIGSNPSAIDFKG 130 (381)
T ss_pred hcChHHHHHHHHHHHHHHHHhCCeEEEEecCC----------HH---HHHHHH---HcCCcEEEEEeeECCCCchhhhhH
Confidence 46788888899999999999999999998631 11 222332 35678766432211 11 11
Q ss_pred HHHHHhcC---CcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecch
Q 013175 182 ADLINKTG---HVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGD 258 (448)
Q Consensus 182 ~~~~~~~~---~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd 258 (448)
.+...... ...+++ ++... ..+.|| ..+++.++++.+.|+++|+++++|+.+.
T Consensus 131 ~~~~~~~~~~~~~~~~~-----v~~~~---------~p~a~~----------~~s~e~l~~~~~lA~~~g~~i~~Hl~E~ 186 (381)
T cd01312 131 ETFLERFKRSKSFESQL-----FIPAI---------SPHAPY----------SVHPELAQDLIDLAKKLNLPLSTHFLES 186 (381)
T ss_pred HHHHHHHHHhhccCccc-----eEEEE---------CCCCCc----------ccCHHHHHHHHHHHHHcCCeEEEEecCc
Confidence 11111100 000111 11111 112233 4578999999999999999999999754
Q ss_pred HH-HHHHHH-----------------------HHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccC
Q 013175 259 RA-NDLVLD-----------------------MYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLD 314 (448)
Q Consensus 259 ~a-~~~~l~-----------------------a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~ 314 (448)
.. +....+ .+ ......|..+.+..++||..+++++++++++.|+.+++||.+.
T Consensus 187 ~~e~~~~~~~~g~~~~~~~~~~~~~~~~~g~~pv-~~l~~~g~L~~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn-- 263 (381)
T cd01312 187 KEEREWLEESKGWFKHFWESFLKLPKPKKLATAI-DFLDMLGGLGTRVSFVHCVYANLEEAEILASRGASIALCPRSN-- 263 (381)
T ss_pred HHHHHHHHHhccchhhHhhhhcccccccCCCCHH-HHHHHcCCCCCCcEEEECCcCCHHHHHHHHHcCCeEEECcchh--
Confidence 32 221111 11 1234456778899999999999999999999999999999762
Q ss_pred chhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCC--CCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHH
Q 013175 315 DADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAH 392 (448)
Q Consensus 315 ~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~--~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~ 392 (448)
..+| ...+|+++++++|+++++|||++.+ ..+++..|+.+...... ....+++.++|+++
T Consensus 264 ------~~lg-----~g~~p~~~~~~~Gv~v~lGtD~~~~~~~~d~~~~~~~~~~~~~~-------~~~~~~~~~~l~~a 325 (381)
T cd01312 264 ------RLLN-----GGKLDVSELKKAGIPVSLGTDGLSSNISLSLLDELRALLDLHPE-------EDLLELASELLLMA 325 (381)
T ss_pred ------hhhc-----CCCcCHHHHHHCCCcEEEeCCCCccCCCCCHHHHHHHHHHhccc-------ccccCCHHHHHHHH
Confidence 2344 3457999999999999999998643 35899998877643211 11136889999999
Q ss_pred hHHHHHHcccCCCcccccCCCcccEEEecCCCCC----Chhhh--ccCeeeEEEECCE
Q 013175 393 TLSAARACFLENDVGSLSPGKIADFVILSTSSWE----DFAAE--VSASIEATYVSGV 444 (448)
Q Consensus 393 T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~----~~~~~--~~~~v~~t~~~G~ 444 (448)
|.|+|+++|++ .|+|++||.||||++|.+... ++..+ ....|..|||+|+
T Consensus 326 T~~gA~alg~~--~Gsle~Gk~ADlvv~d~~~~~~~~~~~~~~~~~~~~v~~v~v~G~ 381 (381)
T cd01312 326 TLGGARALGLN--NGEIEAGKRADFAVFELPGPGIKEQAPLQFILHAKEVRHLFISGK 381 (381)
T ss_pred HHHHHHHhCCC--CCccCCCCcccEEEEeCCCcCCCCccHHHHHHccCCCCEEEecCC
Confidence 99999999996 899999999999999976422 11111 2457999999996
No 26
>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family.
Probab=99.94 E-value=4e-26 Score=223.22 Aligned_cols=289 Identities=19% Similarity=0.185 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcchhhHHHHHHhcCCcCC
Q 013175 114 RREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLS 193 (448)
Q Consensus 114 ~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~~~~~~~~~~~~~~~~ 193 (448)
.++.+.+++++|+++|||||.||+++.|..+.. +.++...+. .++...+++.++.......++.++..
T Consensus 22 ~~ed~~s~t~aA~~GGvTtv~~mPnt~P~~~~~----~~~~~~~~~-a~~~~~vd~~~~~~~~~~~~l~~~~~------- 89 (361)
T cd01318 22 YKEDFVSGSRAAAAGGVTTVMDMPNTKPPTTTA----EALYEKLRL-AAAKSVVDYGLYFGVTGSEDLEELDK------- 89 (361)
T ss_pred ccCcHHHHHHHHHcCCCEEEEECCCCCCCCCcH----HHHHHHHHH-hccCceeEEEEEEeecChhhHHHHHH-------
Confidence 578899999999999999999999765554432 222222222 23345678777654332223444322
Q ss_pred CCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHH---------
Q 013175 194 DWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLV--------- 264 (448)
Q Consensus 194 ~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~--------- 264 (448)
+.+.|+|+|..... +....+...|.++++.+. .++.+||+...-+...
T Consensus 90 --~~~~g~k~f~~~~~------------------~~~~~~~~~l~~~~~~~~---~~v~~H~E~~~l~~~~~~~~~~~~~ 146 (361)
T cd01318 90 --APPAGYKIFMGDST------------------GDLLDDEETLERIFAEGS---VLVTFHAEDEDRLRENRKELKGESA 146 (361)
T ss_pred --hhCcEEEEEEecCC------------------CCcCCCHHHHHHHHHhcC---CeEEEeCCChHHHHHHHhhhhhccC
Confidence 23567898863210 001146778888888774 7899999875422111
Q ss_pred ----------HHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhC--CcEEeeccccccCchhHHHHhcCHhhhhhhh
Q 013175 265 ----------LDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQ--GIVASMQPQHLLDDADSARKKLGVDRAERES 332 (448)
Q Consensus 265 ----------l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~--gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~ 332 (448)
..++.++.......+.+++|.|++.. +.++++++. ++++++||+|+.++.+.+. .+|. ++ +.+
T Consensus 147 ~~~~~P~~aE~~av~r~~~la~~~~~~~hi~Hvs~~--~~~~~i~~~k~~vt~ev~ph~L~l~~~~~~-~~~~-~~-k~~ 221 (361)
T cd01318 147 HPRIRDAEAAAVATARALKLARRHGARLHICHVSTP--EELKLIKKAKPGVTVEVTPHHLFLDVEDYD-RLGT-LG-KVN 221 (361)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCCH--HHHHHHHHhCCCeEEEeCHHHhhcCHHHHh-cCCC-eE-EEe
Confidence 11222222222224678999998854 456666655 8999999999988776554 3443 34 566
Q ss_pred hhHHHH---------HHcCCceeecCCC-CCCCCCHHHHHHHHHcCCCCC---CC--CCCCCCCCCCHHHHHHHHhHHHH
Q 013175 333 YLFQSL---------LANNALLALGSDW-PVADINPLCAIRTAMKRIPPG---WD--NAWIPSERISLTDALIAHTLSAA 397 (448)
Q Consensus 333 ~~~~~~---------~~~Gv~v~~gSD~-p~~~~~p~~~~~~a~~r~~~~---~~--~~~~~~~~ls~~~al~~~T~n~A 397 (448)
||+|+. +++|.+.+++||+ |....+....++.+..+.... .. ..+....+++++++++++|.|||
T Consensus 222 PPlr~~~d~~aL~~~l~~G~id~i~SDh~P~~~~~k~~~~~~a~~G~~g~e~~l~~~~~~v~~~~l~l~~a~~~~t~nPA 301 (361)
T cd01318 222 PPLRSREDRKALLQALADGRIDVIASDHAPHTLEEKRKGYPAAPSGIPGVETALPLMLTLVNKGILSLSRVVRLTSHNPA 301 (361)
T ss_pred CCCCCHHHHHHHHHHHhCCCCCEEeeCCCCCCHHHccCChhhCCCCCccHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHH
Confidence 776654 8899999999994 543221111111111111000 00 00123457999999999999999
Q ss_pred HHcccCCCcccccCCCcccEEEecCCCCC--Chhhhc-------------cCeeeEEEECC
Q 013175 398 RACFLENDVGSLSPGKIADFVILSTSSWE--DFAAEV-------------SASIEATYVSG 443 (448)
Q Consensus 398 ~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~--~~~~~~-------------~~~v~~t~~~G 443 (448)
+++|+++ +|+|++|+.|||||+|.+... +.+.+. ..+|..||++|
T Consensus 302 ~~lgl~~-~G~i~~G~~ADlvv~d~~~~~~v~~~~~~s~~~~tp~~G~~l~G~v~~t~~~G 361 (361)
T cd01318 302 RIFGIKN-KGRIAEGYDADLTVVDLKEERTIRAEEFHSKAGWTPFEGFEVTGFPVMTIVRG 361 (361)
T ss_pred HHhCCCC-CCccCCCCcCCEEEEeCCCCEEECHHHccccCCCCCCCCCEEeeEEEEEEeCc
Confidence 9999975 799999999999999988544 333332 24566666665
No 27
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.
Probab=99.94 E-value=6.6e-24 Score=213.81 Aligned_cols=293 Identities=16% Similarity=0.140 Sum_probs=193.4
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcc------
Q 013175 104 PWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLET------ 177 (448)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~------ 177 (448)
+.-+.+++++++...+.+..++++.|+||+.||... +.... ... ..+.+.+. ++++|.++.....+
T Consensus 95 ~~~~~~~~e~~~~~a~~~~~e~l~~GtTt~~d~~~~-~~~~~-~~~---~~~~~a~~---~~GiR~~~~~~~~~~~~~~~ 166 (441)
T TIGR03314 95 RLDRALTLEDVYYSGLICSLDAIKSGCTTVIDHHAS-PNAIT-GSL---STIRKAAD---EAGLRTMLCYETSDRDGGKE 166 (441)
T ss_pred HhhhhCCHHHHHHHHHHHHHHHHHcCCeEEEecccc-ccccc-chH---HHHHHHHH---HhCCeEEEeeeeecCCCccc
Confidence 333557889999889999999999999999998532 11100 011 12223332 35678766432111
Q ss_pred hhh-HH---HHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEE
Q 013175 178 WSS-LA---DLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAI 253 (448)
Q Consensus 178 ~~~-~~---~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~i 253 (448)
... +. ++.+......+++ ++... ..+.|| .++++.++++.+.|.++|+++++
T Consensus 167 ~~~~l~~~~~~~~~~~~~~~~~-----i~~~~---------~p~~~~----------t~s~~~l~~~~~lA~~~~~~i~~ 222 (441)
T TIGR03314 167 MQEGVEENIAFIKKSSGKEPYL-----VEAHI---------GAHAPF----------TVSDAGLEMCREAVQATGRGFHI 222 (441)
T ss_pred HHHHHHHHHHHHHHhccCCCCc-----eEEEE---------ecCCCC----------CCCHHHHHHHHHHHHHcCCCEEE
Confidence 111 11 1111100000011 11110 112233 45789999999999999999999
Q ss_pred EecchH-HHHHHHHHH----HHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhh
Q 013175 254 HAIGDR-ANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRA 328 (448)
Q Consensus 254 Ha~gd~-a~~~~l~a~----~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~ 328 (448)
|+.+.. .+....+.+ -+.....|..+.+..+.||.++++++++++++.|+.+++||.+. .++|
T Consensus 223 H~~E~~~e~~~~~~~~g~~~~~~l~~~G~l~~~~~~~H~~~~~~~d~~~la~~g~~v~~cP~sn--------~~l~---- 290 (441)
T TIGR03314 223 HVAEDIYDVEDSHHKYGKDIVERLADFGLLGSKTLAAHCIYLSDREIELLNETDTFVVHNPESN--------MGNA---- 290 (441)
T ss_pred EcCCCHHHHHHHHHHcCCCHHHHHHHCCCCCCCeEEEEEecCCHHHHHHHHHcCCcEEECHHHH--------hhhc----
Confidence 997643 233222221 12234467788899999999999999999999999999999862 1233
Q ss_pred hhhhhhHHHHHHcCCceeecCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcc--cCCCc
Q 013175 329 ERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACF--LENDV 406 (448)
Q Consensus 329 ~~~~~~~~~~~~~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g--~~~~~ 406 (448)
.+.+|+++++++|+++++|||+. +.|+|..|..+....... .......+.++++++|.|+|++++ ++.++
T Consensus 291 -~G~~p~~~~~~~Gv~v~LGtD~~--~~d~~~em~~a~~~~~~~-----~~~~~~~~~~~~~~aT~~ga~al~~~l~~~~ 362 (441)
T TIGR03314 291 -VGYNPVLRMFKNGILLGLGTDGY--TSDMFESLKFANFKHKDA-----GGDLNAAWPESPAMLFENNNEIAERNFGAKF 362 (441)
T ss_pred -cCCCCHHHHHHCCCEEEEcCCCC--CcCHHHHHHHHHHHhccc-----cCCCCccHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 45789999999999999999974 468999998876432211 011123457899999999999997 34568
Q ss_pred ccccCCCcccEEEecCCCCC--Chhh----hc----cCeeeEEEECCEEecC
Q 013175 407 GSLSPGKIADFVILSTSSWE--DFAA----EV----SASIEATYVSGVQAYP 448 (448)
Q Consensus 407 Gsi~~Gk~ADlvvld~d~~~--~~~~----~~----~~~v~~t~~~G~~V~~ 448 (448)
|+|++||.|||+++|.+... +..+ +. ..+|..||++|++||+
T Consensus 363 G~Le~G~~ADlvv~d~~~~~~~~~~~~~~~lv~~~~~~~V~~v~V~G~~v~~ 414 (441)
T TIGR03314 363 GRLEPGAKADLIIVDYNAPTPLTADNINGHILFGMNGGSVDSTMVNGKVVME 414 (441)
T ss_pred CCCCCCCcccEEEEcCCCCeeechhhccccceecCCCCeeEEEEECCEEEEE
Confidence 99999999999999987432 2122 11 4579999999999873
No 28
>PRK07627 dihydroorotase; Provisional
Probab=99.93 E-value=2.4e-25 Score=222.34 Aligned_cols=296 Identities=18% Similarity=0.212 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCc-c--hhhHHHHHHhcCC
Q 013175 114 RREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE-T--WSSLADLINKTGH 190 (448)
Q Consensus 114 ~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~-~--~~~~~~~~~~~~~ 190 (448)
.++.+...++.++++|||||.+|++..|.... .+..+.+... .+....++++.+.... + ...+.++....
T Consensus 71 ~~e~~~t~s~aa~~gGvTtv~~~p~~~p~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~i~~l~-- 143 (425)
T PRK07627 71 YKATLESEMAAAVAGGVTSLVCPPDTDPVLDE----PGLVEMLKFR-ARNLNQAHVYPLGALTVGLKGEVLTEMVELT-- 143 (425)
T ss_pred ccCcHHHHHHHHHhCCeeEEEeCCCCCCCCCC----HHHHHHHHHH-hhccCceeEEEeCeEEcCCCccCHHHHHHHH--
Confidence 35678889999999999999999875543322 1222222222 2233356665443221 1 11232322111
Q ss_pred cCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHH--------
Q 013175 191 VLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRAND-------- 262 (448)
Q Consensus 191 ~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~-------- 262 (448)
-.|++.|.+. +.+..+...+.++++.+.+.|.++.+||+.....+
T Consensus 144 -------~~G~~~fk~~--------------------~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~~~~~~~~~~g~ 196 (425)
T PRK07627 144 -------EAGCVGFSQA--------------------NVPVVDTQVLLRALQYASTFGFTVWLRPLDAFLGRGGVAASGA 196 (425)
T ss_pred -------hCCEEEEEcC--------------------CcccCCHHHHHHHHHHHHhcCCEEEEecCChhhhhCCCcCCCH
Confidence 0133334321 11124577899999999999999999998643211
Q ss_pred -------------HHHHHHHHhHHhcCCCCCCCeEEecccCCh-hhHHHHHhCC--cEEeeccccccCchhHHHHhcCHh
Q 013175 263 -------------LVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARKKLGVD 326 (448)
Q Consensus 263 -------------~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~-~~i~~~~~~g--v~~~~~P~~~~~~~~~~~~~~g~~ 326 (448)
....++.++.......+.+.+|.|++.... +.+...++.| +++++||+|+.++.+.+.. .+.
T Consensus 197 ~~~~~~~~~~P~~aE~~av~r~~~la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~ph~L~l~~~~~~~-~~~- 274 (425)
T PRK07627 197 VASRLGLSGVPVAAETIALHTIFELMRVTGARVHLARLSSAAGVALVRAAKAEGLPVTCDVGVNHVHLIDVDIGY-FDS- 274 (425)
T ss_pred hHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHCCCCeEEEeccchheEeHhHHhc-cCC-
Confidence 112233333333333467899999886543 4455555665 8889999999987665432 221
Q ss_pred hhhhhhhh---------HHHHHHcCCceeecCCC-CCCC---CCHHHHHHHHHcCCCCCCC--CCCCCCCCCCHHHHHHH
Q 013175 327 RAERESYL---------FQSLLANNALLALGSDW-PVAD---INPLCAIRTAMKRIPPGWD--NAWIPSERISLTDALIA 391 (448)
Q Consensus 327 r~~~~~~~---------~~~~~~~Gv~v~~gSD~-p~~~---~~p~~~~~~a~~r~~~~~~--~~~~~~~~ls~~~al~~ 391 (448)
.+ +.+|| +.+.+++|.+.+++||+ |++. ..||..+..++++...... ..+....++++++++++
T Consensus 275 ~~-k~~PPLR~~~d~~~L~~~l~~G~id~i~SDHaP~~~~~k~~~~~~~~~G~~g~e~~~pl~~~~~~~~~i~~~~~l~~ 353 (425)
T PRK07627 275 QF-RLDPPLRSQRDREAIRAALADGTIDAICSDHTPVDDDEKLLPFAEATPGATGLELLLPLTLKWADEAKVPLARALAR 353 (425)
T ss_pred ce-EEeCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCCHHHccCCHhhCCCCceeHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 12 44444 45678889999999998 6541 2355544444433221000 01223557999999999
Q ss_pred HhHHHHHHcccCCCcccccCCCcccEEEecCCC-CC-Chhhhcc-------------CeeeEEEECCEEecC
Q 013175 392 HTLSAARACFLENDVGSLSPGKIADFVILSTSS-WE-DFAAEVS-------------ASIEATYVSGVQAYP 448 (448)
Q Consensus 392 ~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~-~~-~~~~~~~-------------~~v~~t~~~G~~V~~ 448 (448)
+|.|||+++|+ + +|+|++|+.||||++|.+. +. .++++.+ .+|..||++|++||+
T Consensus 354 ~t~~pA~~lg~-~-~G~l~~G~~ADlvv~d~~~~~~v~~~~~~s~~~~sp~~g~~~~g~v~~t~v~G~~v~~ 423 (425)
T PRK07627 354 ITSAPARVLGL-P-AGRLAEGAPADLCVFDPDAHWRVEPRALKSQGKNTPFLGYELPGRVRATLVAGQVAFE 423 (425)
T ss_pred HHHHHHHHhCC-C-CCcccCCCcCCEEEECCCCcEEEChhhccccCCCCCCcCCEeeeEEEEEEECCEEEee
Confidence 99999999999 3 7999999999999999984 44 4343332 589999999999984
No 29
>PRK08393 N-ethylammeline chlorohydrolase; Provisional
Probab=99.93 E-value=6.4e-24 Score=213.24 Aligned_cols=290 Identities=17% Similarity=0.145 Sum_probs=188.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCC---cchhhHHH
Q 013175 107 PEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPL---ETWSSLAD 183 (448)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~---~~~~~~~~ 183 (448)
..+++++++.....+..++++.|+||+.|+... ... +.+...+ ..+|.++.... .......+
T Consensus 90 ~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~---------~~~---~~~a~~~---~G~r~~~~~~~~~~~~~~~~~~ 154 (424)
T PRK08393 90 RKLKRKDIYWGAYLGLLEMIKSGTTTFVDMYFH---------MEE---VAKATLE---VGLRGYLSYGMVDLGDEEKREK 154 (424)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCceEEeccccC---------HHH---HHHHHHH---hCCeEEEeceEecCCCccchHH
Confidence 457888999999999999999999999998531 112 2222222 34565543211 11111111
Q ss_pred HHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchH-HHH
Q 013175 184 LINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDR-AND 262 (448)
Q Consensus 184 ~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~-a~~ 262 (448)
.+...... +.-+|....+.+. ..-..+.|| .++++.|+++++.|+++|+++++|+.+.. .+.
T Consensus 155 ~l~~~~~~------~~~~~~~~~~~v~-~~~~p~~~~----------~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~ 217 (424)
T PRK08393 155 EIKETEKL------MEFIEKLNSPRVH-FVFGPHAPY----------TCSLALLKWVREKAREWNKLITIHLSETMDEIK 217 (424)
T ss_pred HHHHHHHH------HHHHhcCCCCceE-EEEeCCcCC----------cCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHH
Confidence 11100000 0001111011000 000111222 35789999999999999999999996432 333
Q ss_pred HHHHHH----HHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHH
Q 013175 263 LVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSL 338 (448)
Q Consensus 263 ~~l~a~----~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~ 338 (448)
...+.+ .......|..+.+..++||..+++++++++++.|+.+++||.. +..+| ...+|++++
T Consensus 218 ~~~~~~g~~~~~~l~~~G~l~~~~~~~H~~~l~~~~l~~la~~g~~v~~~P~s--------n~~lg-----~g~~~~~~~ 284 (424)
T PRK08393 218 QIREKYGKSPVVLLDEIGFLNEDVIAAHGVWLSSRDIRILASAGVTVAHNPAS--------NMKLG-----SGVMPLRKL 284 (424)
T ss_pred HHHHHhCcCHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHhcCCEEEECHHH--------HHhhc-----cCCCCHHHH
Confidence 222211 1122345667778899999999999999999999999999964 12344 346799999
Q ss_pred HHcCCceeecCCCCCC--CCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCccc
Q 013175 339 LANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIAD 416 (448)
Q Consensus 339 ~~~Gv~v~~gSD~p~~--~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~AD 416 (448)
+++|+++++|||++.+ ..+++..+..+....... .. ....++++++++++|.|||+++|++ .|+|++||.||
T Consensus 285 ~~~Gv~v~lGtD~~~~~~~~d~~~~~~~a~~~~~~~---~~-~~~~~~~~~al~~aT~~~A~~lg~~--~G~l~~G~~AD 358 (424)
T PRK08393 285 LNAGVNVALGTDGAASNNNLDMLREMKLAALLHKVH---NL-DPTIADAETVFRMATQNGAKALGLK--AGVIKEGYLAD 358 (424)
T ss_pred HHCCCcEEEecCCCccCCchhHHHHHHHHHHHHhhc---cC-CCCcCCHHHHHHHHHHHHHHHhCCC--CCccCCCCccC
Confidence 9999999999998653 458998888764221110 01 1234789999999999999999996 59999999999
Q ss_pred EEEecCCCCC-----Chh-hh----ccCeeeEEEECCEEec
Q 013175 417 FVILSTSSWE-----DFA-AE----VSASIEATYVSGVQAY 447 (448)
Q Consensus 417 lvvld~d~~~-----~~~-~~----~~~~v~~t~~~G~~V~ 447 (448)
||++|.+... ++. .+ ...+|..||++|++||
T Consensus 359 lvvld~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~ 399 (424)
T PRK08393 359 IAVIDFNRPHLRPINNPISHLVYSANGNDVETTIVDGKIVM 399 (424)
T ss_pred EEEEeCCCCCcCCCCChHHHeeeeCCCCCeeEEEECCEEEE
Confidence 9999987422 111 11 1347999999999987
No 30
>PRK08418 chlorohydrolase; Provisional
Probab=99.93 E-value=5.1e-24 Score=212.17 Aligned_cols=278 Identities=14% Similarity=0.114 Sum_probs=183.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcc-----h-hhH
Q 013175 108 EVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLET-----W-SSL 181 (448)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~-----~-~~~ 181 (448)
.++++..+...+.+..++++.|+||+.|+..+. ...++ + .+.++|.+++....+ . ...
T Consensus 94 ~l~~~~~~~~~~~~~~E~l~~GtTtv~d~~~~~----------~~~~a---~---~~~GiR~~~~~~~~~~~~~~~~~~~ 157 (408)
T PRK08418 94 DLLEKCKGALIQQAINEMLKSGVGTIGAISSFG----------IDLEI---C---AKSPLRVVFFNEILGSNASAVDELY 157 (408)
T ss_pred hcCHHHHHHHHHHHHHHHHhcCceEEEEeecch----------hhHHH---H---HhcCCeEEEEeeeeCCCccchhhhH
Confidence 356677777888899999999999999986321 11122 2 245677765422110 0 001
Q ss_pred HHHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHH-
Q 013175 182 ADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRA- 260 (448)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a- 260 (448)
.++....... .. .....++.. -..+.|| .+|++.++++.+.|+++|+++++|+.+...
T Consensus 158 ~~~~~~~~~~-~~-~~~~~~~~~---------~aph~~~----------t~s~e~l~~~~~~A~~~~~~i~~H~~E~~~E 216 (408)
T PRK08418 158 QDFLARFEES-KK-FKSKKFIPA---------IAIHSPY----------SVHPILAKKALQLAKKENLLVSTHFLESKAE 216 (408)
T ss_pred HHHHHHHHhh-hc-ccCCceeEE---------EeCCCCC----------CCCHHHHHHHHHHHHHcCCeEEEEecCCHHH
Confidence 1111110000 00 000001110 0122344 457899999999999999999999976442
Q ss_pred HHHHHH---------------------HHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHH
Q 013175 261 NDLVLD---------------------MYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSA 319 (448)
Q Consensus 261 ~~~~l~---------------------a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~ 319 (448)
++...+ .++.+ ...+ +.+..+.||.++++++++++++.|+.+++||.+.
T Consensus 217 ~~~~~~~~G~~~~~~~~~~~~~~~~~~pv~~l-~~~g--~~~~~~~H~~~~~~~di~~la~~g~~v~~cP~sn------- 286 (408)
T PRK08418 217 REWLEESKGWFKKFFEKFLKEPKPLYTPKEFL-ELFK--GLRTLFTHCVYASEEELEKIKSKNASITHCPFSN------- 286 (408)
T ss_pred HHHHHhccCchhhhhhhhcccccccCCHHHHH-HHhC--CCCeEEEecccCCHHHHHHHHHcCCcEEECHhHH-------
Confidence 222211 11111 1112 3578999999999999999999999999999862
Q ss_pred HHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCC--CCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHH
Q 013175 320 RKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAA 397 (448)
Q Consensus 320 ~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~--~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A 397 (448)
.++| ...+|+++++++|+++++|||++.+ ..+++..|..+..+... .....+++++|+++|.|+|
T Consensus 287 -~~lg-----~g~~p~~~~~~~Gi~v~lGtD~~~~~~~~~~~~em~~~~~~~~~-------~~~~~~~~~~l~~aT~~gA 353 (408)
T PRK08418 287 -RLLS-----NKALDLEKAKKAGINYSIATDGLSSNISLSLLDELRAALLTHAN-------MPLLELAKILLLSATRYGA 353 (408)
T ss_pred -HHhc-----CCCccHHHHHhCCCeEEEeCCCCCCCCCcCHHHHHHHHHHHhcc-------CCccccHHHHHHHHHHHHH
Confidence 2345 3467999999999999999997543 57899999877643211 0111357899999999999
Q ss_pred HHcccCCCcccccCCCcccEEEecCCC-CCChhh----h--ccCeeeEEEECCEEec
Q 013175 398 RACFLENDVGSLSPGKIADFVILSTSS-WEDFAA----E--VSASIEATYVSGVQAY 447 (448)
Q Consensus 398 ~~~g~~~~~Gsi~~Gk~ADlvvld~d~-~~~~~~----~--~~~~v~~t~~~G~~V~ 447 (448)
+++|++ .|+|++||.||||++|.+. ...+.. + ....|..||++|++|.
T Consensus 354 ~alg~~--~G~l~~G~~ADlv~~d~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~ 408 (408)
T PRK08418 354 KALGLN--NGEIKEGKDADLSVFELPEECTKKEQLPLQFILHAKEVKKLFIGGKEVK 408 (408)
T ss_pred HHhCCC--CccccCCCccCEEEEeCCCCCCChhHhHHHHHhccCccceEEECCEEcC
Confidence 999996 6999999999999999863 222111 1 2457999999999973
No 31
>TIGR01224 hutI imidazolonepropionase. This enzyme catalyzes the third step in histidine degradation.
Probab=99.93 E-value=1.5e-24 Score=215.04 Aligned_cols=277 Identities=20% Similarity=0.180 Sum_probs=182.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEcc----CCc----c-
Q 013175 107 PEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFF----PLE----T- 177 (448)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~----~~~----~- 177 (448)
..+++++++.....++.++++.|+|+|.+.... +.. ........+..+++.. ++++++.... .+. .
T Consensus 86 ~~~~~ed~~~~a~~~~~e~l~~Gvt~ve~~~~~--g~~-~~~~~~~~~a~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~ 160 (377)
T TIGR01224 86 RAASEEELLKLALFRLKSMLRSGTTTAEVKSGY--GLD-LETELKMLRAAKALHE--EQPVDVVTTFLGAHAVPPEFQGR 160 (377)
T ss_pred HhCCHHHHHHHHHHHHHHHHHCCceEEEecccC--CCC-HHHHHHHHHHHHHHHh--hCCCceEeeeeecccCCccccCC
Confidence 457899999999999999999999999432211 111 0001122233333322 2445554311 010 0
Q ss_pred hhh-HH---H-HHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEE
Q 013175 178 WSS-LA---D-LINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVA 252 (448)
Q Consensus 178 ~~~-~~---~-~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~ 252 (448)
... .. + +.+.... .. .+.+++++... ..++.+.++++++.|+++|++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~--~~--~v~~~~~~~~~----------------------~~~~~~~~~~~~~~A~~~g~~v~ 214 (377)
T TIGR01224 161 PDDYVDGICEELIPQVAE--EG--LASFADVFCEA----------------------GVFSVEQSRRILQAAQEAGLPVK 214 (377)
T ss_pred HHHHHHHHHHHHHHHHHH--hC--CCCeeEEEecC----------------------CCcCHHHHHHHHHHHHHCCCCEE
Confidence 000 10 1 1111000 00 13444444311 12457789999999999999999
Q ss_pred EEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhh
Q 013175 253 IHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERES 332 (448)
Q Consensus 253 iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~ 332 (448)
+|+.+.... ..++.+.. .+ +.++.|+.++++++++++++.|+.+++||.+.. .++ ...
T Consensus 215 ~H~~e~~~~----~~~~~~~~-~g----~~~~~H~~~~~~~~l~~la~~g~~~~~~P~~~~--------~l~-----~~~ 272 (377)
T TIGR01224 215 LHAEELSNL----GGAELAAK-LG----AVSADHLEHASDAGIKALAEAGTVAVLLPGTTF--------YLR-----ETY 272 (377)
T ss_pred EEecCCCCC----CHHHHHHH-cC----CCccHHHhcCCHHHHHHHHhcCCEEEECchHHH--------hcC-----CcC
Confidence 999764321 12222222 23 567899999999999999999999999999632 223 246
Q ss_pred hhHHHHHHcCCceeecCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCC
Q 013175 333 YLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPG 412 (448)
Q Consensus 333 ~~~~~~~~~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~G 412 (448)
+|+++++++|+++++|||+.. ..+|+..+...+.+.. ...++|++++++++|.|||+++|+++++|+|++|
T Consensus 273 ~p~~~l~~~Gv~v~lgTD~~~-~~~~~~~~~~~~~~~~--------~~~~ls~~eal~~~T~~~A~~lg~~~~~G~l~~G 343 (377)
T TIGR01224 273 PPARQLIDYGVPVALATDLNP-GSSPTLSMQLIMSLAC--------RLMKMTPEEALHAATVNAAYALGLGEERGTLEAG 343 (377)
T ss_pred ccHHHHHHCCCCEEEECCCCC-CCChhHHHHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCC
Confidence 799999999999999999631 1566656655443211 1346899999999999999999998889999999
Q ss_pred CcccEEEecCCCCC-ChhhhccCeeeEEEECCEE
Q 013175 413 KIADFVILSTSSWE-DFAAEVSASIEATYVSGVQ 445 (448)
Q Consensus 413 k~ADlvvld~d~~~-~~~~~~~~~v~~t~~~G~~ 445 (448)
|.|||||+|.+++. .+......+|..||++|++
T Consensus 344 ~~ADlvv~d~~~~~~~~~~~~~~~v~~v~v~G~~ 377 (377)
T TIGR01224 344 RDADLVILSAPSYAEIPYHYGVNHVHAVIKNGNI 377 (377)
T ss_pred CcCCEEEEcCCChHHhhhhcCCCCceEEEECCCC
Confidence 99999999999765 3333344689999999984
No 32
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]
Probab=99.93 E-value=7.1e-25 Score=216.29 Aligned_cols=306 Identities=19% Similarity=0.192 Sum_probs=196.7
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcchhhH-HH
Q 013175 105 WIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSL-AD 183 (448)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~~~~-~~ 183 (448)
++..+.. ++++.+.+++++++++|+|||.||+++.|...+.+ .++... ...+++..+++.++......... .+
T Consensus 61 H~repg~-~~ke~~~tgs~AAa~GG~Ttv~dmPnt~P~~~~~~----~~~~~~-~~a~~~~~vd~~~~~~it~~~~~~~~ 134 (430)
T COG0044 61 HFREPGF-EHKETFETGSRAAAAGGVTTVVDMPNTKPPIDTAE----ALEDKL-ERAKGKSVVDYAFYGGLTKGNLGKLE 134 (430)
T ss_pred ecCCCCc-chhhhHHHHHHHHHcCCceEEEECCCCCCCCCCHH----HHHHHH-HHhhccceeEEEEEEEEeccccchhh
Confidence 3444433 45788999999999999999999998776554322 222211 12244677888887654332111 12
Q ss_pred HHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHH-
Q 013175 184 LINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRAND- 262 (448)
Q Consensus 184 ~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~- 262 (448)
+.+. ....|+|.|+|++. ...+.+.+++.++.+.+.|..+.+||+.+.-+.
T Consensus 135 ~~~~--------~~~~g~~~F~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~H~Ed~~~~~~ 186 (430)
T COG0044 135 LTER--------GVEAGFKGFMDDST--------------------GALDDDVLEEALEYAAELGALILVHAEDDDLIAE 186 (430)
T ss_pred hhhh--------hhccceEEEecCCc--------------------CcCCHHHHHHHHHHHHhcCCeEEEecCChhHhhh
Confidence 2111 11467899988752 235678899999999999999999999774221
Q ss_pred --------------------HHHHHHHHhHHhcCCCCCCCeEEecccCCh-hhHHHHHhC--CcEEeeccccccCchhHH
Q 013175 263 --------------------LVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQ--GIVASMQPQHLLDDADSA 319 (448)
Q Consensus 263 --------------------~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~-~~i~~~~~~--gv~~~~~P~~~~~~~~~~ 319 (448)
....++++........+.+.|++|.+.... +.+.+.+.. .|++++||+|+..+.+.+
T Consensus 187 ~~~~~g~~~~~~~~~~~p~~aE~~~iar~~~la~~~g~~vhi~HiSt~~sv~li~~ak~~g~~vt~EvtphHL~l~~~~~ 266 (430)
T COG0044 187 GVMNEGLRAPELGLAGRPPIAEASAIARDLELARATGARVHICHISTKESVELIRAAKAEGIRVTAEVTPHHLLLDEEDI 266 (430)
T ss_pred HHHhcCccchhhccCCCChHHHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHHHHHHhhcCCceEEeecchheEccHhHh
Confidence 111222332222223457999999886544 444455555 488999999999876554
Q ss_pred HHhcCHhhhhhhhhhHH---------HHHHcCCceeecCCCC-CCC---CCHHHHHHHHHcCCCCCC--CCCCCCCCCCC
Q 013175 320 RKKLGVDRAERESYLFQ---------SLLANNALLALGSDWP-VAD---INPLCAIRTAMKRIPPGW--DNAWIPSERIS 384 (448)
Q Consensus 320 ~~~~g~~r~~~~~~~~~---------~~~~~Gv~v~~gSD~p-~~~---~~p~~~~~~a~~r~~~~~--~~~~~~~~~ls 384 (448)
.. ++. .. +++||+| +.++.|.+.+++||+. .+. ..+|.....++....... ...+...+.+|
T Consensus 267 ~~-~~~-~~-k~nPPLR~~~dr~aL~~~l~~G~ID~iasDHaPht~eeK~~~f~~ap~G~~glE~~lpl~l~lv~~g~ls 343 (430)
T COG0044 267 ED-LGT-LA-KVNPPLRDEEDREALWEALKDGVIDVIASDHAPHTLEEKRLPFEEAPSGIPGLETALPLLLTLVKKGRLS 343 (430)
T ss_pred hc-cCc-ce-EECCCCCCHHHHHHHHHHHhCCCCcEEEcCCCCCCHHHhccchhhCCCCCccHHHHHHHHHHHHHcCCcC
Confidence 43 322 12 5666665 4678899999999963 221 011211111111100000 00123456799
Q ss_pred HHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCC-CC-Chhhhc-------------cCeeeEEEECCEEecC
Q 013175 385 LTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSS-WE-DFAAEV-------------SASIEATYVSGVQAYP 448 (448)
Q Consensus 385 ~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~-~~-~~~~~~-------------~~~v~~t~~~G~~V~~ 448 (448)
+.+++++.|.|||++||+.. +|.|++|+.|||+|+|.+. ++ ..+.+. ..+|.+|+++|++||.
T Consensus 344 l~~~v~~~S~nPA~ifgl~~-~g~i~~G~~ADl~lvD~~~~~~i~~~~~~sk~~~sPf~G~~~~g~v~~Ti~rG~~v~~ 421 (430)
T COG0044 344 LERLVELLSTNPARIFGLPP-KGAIEEGADADLVLVDPDEEWTIRAEELYSKAKNSPFEGFELKGRVVATILRGKVVYE 421 (430)
T ss_pred HHHHHHHHhhCHHHHhCCCC-CCcccCCCccCEEEEcCCCCeEEchhhhccccCCCCcCCCEEeeeEEEEEECCEEEEE
Confidence 99999999999999999987 7889999999999999984 33 323332 3589999999999983
No 33
>PRK07213 chlorohydrolase; Provisional
Probab=99.93 E-value=1.1e-23 Score=208.00 Aligned_cols=270 Identities=19% Similarity=0.202 Sum_probs=182.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCc--chhhHHHH
Q 013175 107 PEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE--TWSSLADL 184 (448)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~--~~~~~~~~ 184 (448)
..+++++++...+.+..++++.|+|||.|+... + . ...+++.++. ..+++|..+..... ....+.+.
T Consensus 89 ~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~--~------~-~~~~~~~~a~--~~~~~r~~~~~~~~~~~~~~~~~~ 157 (375)
T PRK07213 89 NSCSDKELVEGMKEGLYDMYNNGIKAFCDFREG--G------I-KGINLLKKAS--SDLPIKPIILGRPTEADENELKKE 157 (375)
T ss_pred hcCCHHHHHHHHHHHHHHHHHcCCeEEEEhhhc--C------h-hHHHHHHHHH--HcCCCceEEecCCCcccchhhHHH
Confidence 356889999999999999999999999997421 0 0 1111222222 24667765322110 01111111
Q ss_pred HHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHH-HHH
Q 013175 185 INKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRA-NDL 263 (448)
Q Consensus 185 ~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a-~~~ 263 (448)
.+.. ++. .+|. +..+...++++.++++++.|+++|+++++|+.+... ...
T Consensus 158 ~~~~------------~~~-~~g~----------------~~~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~e~~~ 208 (375)
T PRK07213 158 IREI------------LKN-SDGI----------------GLSGANEYSDEELKFICKECKREKKIFSIHAAEHKGSVEY 208 (375)
T ss_pred HHHH------------HHh-cccc----------------cccccccCCHHHHHHHHHHHHHcCCEEEEeeCCchhHHHH
Confidence 1110 010 1120 112233567899999999999999999999965432 222
Q ss_pred HHHH-----HHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHH
Q 013175 264 VLDM-----YKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSL 338 (448)
Q Consensus 264 ~l~a-----~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~ 338 (448)
..+. ++.+ ...|.. .+ .++||.++++++++++++.|+.+++||.+.. .++ ...+|++++
T Consensus 209 ~~~~~G~~~v~~~-~~~G~~-~~-~i~H~~~~~~~~i~~la~~g~~v~~~P~sn~--------~l~-----~g~~~v~~l 272 (375)
T PRK07213 209 SLEKYGMTEIERL-INLGFK-PD-FIVHATHPSNDDLELLKENNIPVVVCPRANA--------SFN-----VGLPPLNEM 272 (375)
T ss_pred HHHHcCCChHHHH-HhcCCC-CC-EEEECCCCCHHHHHHHHHcCCcEEECCcchh--------hhc-----cCCccHHHH
Confidence 2221 2222 223543 33 6999999999999999999999999998632 233 356899999
Q ss_pred HHcCCceeecCCCCCC-CCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccE
Q 013175 339 LANNALLALGSDWPVA-DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADF 417 (448)
Q Consensus 339 ~~~Gv~v~~gSD~p~~-~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADl 417 (448)
+++|+++++|||++.. ..+++..+..+... .++++.++|+++|.|+|+++|+++ .|+|++||.|||
T Consensus 273 ~~~Gv~v~lGTD~~~~~~~~~~~e~~~~~~~------------~~~~~~~~l~~aT~~gA~~lg~~~-~G~l~~G~~ADl 339 (375)
T PRK07213 273 LEKGILLGIGTDNFMANSPSIFREMEFIYKL------------YHIEPKEILKMATINGAKILGLIN-VGLIEEGFKADF 339 (375)
T ss_pred HHCCCEEEEeeCCCCCchHhHHHHHHHHHHH------------hCcCHHHHHHHHHHHHHHHhCCCC-cCCcCCCCcccE
Confidence 9999999999997532 45678888776532 247999999999999999999976 899999999999
Q ss_pred EEecCCCCC---Ch-hhhc----cCeeeEEEECCEE
Q 013175 418 VILSTSSWE---DF-AAEV----SASIEATYVSGVQ 445 (448)
Q Consensus 418 vvld~d~~~---~~-~~~~----~~~v~~t~~~G~~ 445 (448)
|++|.+.+. +| ..+. ...|..||++||+
T Consensus 340 vv~d~~~~~p~~dp~~~lV~~~~~~~v~~v~v~G~~ 375 (375)
T PRK07213 340 TFIKPTNIKFSKNPYASIITRCESGDIVNKILKGKL 375 (375)
T ss_pred EEEcCccccccCCchHHHhhhccCCCceEEEECCcC
Confidence 999975322 22 2232 3479999999984
No 34
>PRK08044 allantoinase; Provisional
Probab=99.93 E-value=2.8e-24 Score=216.49 Aligned_cols=328 Identities=19% Similarity=0.179 Sum_probs=192.4
Q ss_pred chhHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHhcCcceeEeCc-cCCCCCccccchHHHHHHHHHHHhcCCCeeEEE
Q 013175 92 GLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFG-RYYPGESVQLSWEDFADVYQWASYSEKMKIRVC 170 (448)
Q Consensus 92 G~l~e~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~ 170 (448)
|.+.+.++.-+..+++.+... ..+.+.++++.++++|||||.||+ ++.|..... +.++...+ ..+....+++.
T Consensus 48 G~~v~Pg~iD~h~h~~~~~~~-~~e~~~~~~~aa~~gGvTtv~d~~~~~~p~~~~~----~~~~~~~~-~~~~~s~vd~~ 121 (449)
T PRK08044 48 GLVVSPGMVDAHTHISEPGRS-HWEGYETGTRAAAKGGITTMIEMPLNQLPATVDR----ASIELKFD-AAKGKLTIDAA 121 (449)
T ss_pred CCEEcCCeeccccccCCCCcc-ccccHHHHHHHHHhCCceEEECCccCCCCCCCcH----HHHHHHHH-HhccCCeeeEE
Confidence 444443322223344433322 267899999999999999999998 333433322 22222222 22345667877
Q ss_pred EccCCcchhhHHHHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCc
Q 013175 171 LFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQ 250 (448)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~ 250 (448)
++..... ..+.++..... ..+.++|+|+... .+.....+...+++..+.++++.+.+.|.+
T Consensus 122 ~~~~~~~-~~~~ei~~l~~------~gv~~fk~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 182 (449)
T PRK08044 122 QLGGLVS-YNLDRLHELDE------VGVVGFKCFVATC------------GDRGIDNDFRDVNDWQFYKGAQKLGELGQP 182 (449)
T ss_pred EEeeeCC-CCHHHHHHHHH------cCceEEEEEeccc------------CcccccCCccCcCHHHHHHHHHHHHhcCCE
Confidence 6544322 12222222111 1256789885110 000001122345677889999999999999
Q ss_pred EEEEecchHHHHHH------------------------HHHHHHhHHhcCCCCCCCeEEecccCC-hhhHHHHHhCC--c
Q 013175 251 VAIHAIGDRANDLV------------------------LDMYKSVVVTTGKRDQRFRIEHAQHLA-SGTAARFGDQG--I 303 (448)
Q Consensus 251 v~iHa~gd~a~~~~------------------------l~a~~~~~~~~~~~~~r~~i~H~~~~~-~~~i~~~~~~g--v 303 (448)
+.+||+...-++.. ..++.+.....-..+.+.++.|++... -+.+.++++.| +
T Consensus 183 v~~H~E~~~l~~~~~~~~~~~G~~~~~~~~~~~P~~~E~~~v~r~~~lA~~~g~~vhi~HiSt~~~~~~i~~ak~~G~~i 262 (449)
T PRK08044 183 VLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHISSPEGVEEVTRARQEGQDV 262 (449)
T ss_pred EEEecCCHHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCCE
Confidence 99999865532211 111222222222245689999988543 35566666665 8
Q ss_pred EEeeccccccCchhHHHHhcCHhhhhhhhhhHHH---------HHHcCCceeecCCCC-CCCC---CHHHHHHHHHcCCC
Q 013175 304 VASMQPQHLLDDADSARKKLGVDRAERESYLFQS---------LLANNALLALGSDWP-VADI---NPLCAIRTAMKRIP 370 (448)
Q Consensus 304 ~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~---------~~~~Gv~v~~gSD~p-~~~~---~p~~~~~~a~~r~~ 370 (448)
++++||+|++.+.+.+.. +|. .+ +.+||+|. .+..|.+.+++||+. .+.. .+|.....++....
T Consensus 263 t~e~~~h~L~l~~~~~~~-~~~-~~-k~~PPlr~~~d~~aL~~~l~~G~id~i~sDH~P~~~~~K~~~~~~~~~g~~g~e 339 (449)
T PRK08044 263 TCESCPHYFVLDTDQFEE-IGT-LA-KCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMEAWGGIAGLQ 339 (449)
T ss_pred EEEcChhhhcccHHHhhC-CCC-cE-EEcCCCCChHHHHHHHHHHhCCCceEEEcCCCCCChHHccCChhhCCCCceEHH
Confidence 889999999987765432 232 12 44555554 555899999999973 2210 11211100000000
Q ss_pred CCCCC---CCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCC-C-Chhhh-------------c
Q 013175 371 PGWDN---AWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSW-E-DFAAE-------------V 432 (448)
Q Consensus 371 ~~~~~---~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~-~-~~~~~-------------~ 432 (448)
..... .+....+++++++++++|.|||+++|+++ +|+|++|++|||||+|.+.. + ..+++ .
T Consensus 340 ~~l~~~~~~~v~~~~l~~~~~v~~~s~npA~~lgl~~-~G~i~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~sp~~G~~l 418 (449)
T PRK08044 340 NCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQ-KGRIAPGKDADFVFIQPNSSYVLKNEDLEYRHKVSPYVGRTI 418 (449)
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHHhCCCC-CCcCCCCCccCEEEECCCCcEEECHHHccccCCCCCCCCCEE
Confidence 00000 01124469999999999999999999964 79999999999999998743 3 33332 1
Q ss_pred cCeeeEEEECCEEecC
Q 013175 433 SASIEATYVSGVQAYP 448 (448)
Q Consensus 433 ~~~v~~t~~~G~~V~~ 448 (448)
..+|..||++|++||.
T Consensus 419 ~G~v~~t~~~G~~v~~ 434 (449)
T PRK08044 419 GARITKTILRGDVIYD 434 (449)
T ss_pred eeeEEEEEECCEEEEE
Confidence 3579999999999973
No 35
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.
Probab=99.93 E-value=1.7e-23 Score=207.21 Aligned_cols=274 Identities=23% Similarity=0.236 Sum_probs=182.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEcc--CCcc-h---hh
Q 013175 107 PEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFF--PLET-W---SS 180 (448)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~--~~~~-~---~~ 180 (448)
..+++++++.....++.++++.|+|++.++... ..+ ........+.++++..++.+.+.+.+.. .... . ..
T Consensus 83 ~~~~~~d~~~~a~~~~~~~~~~Gvt~~~~~~~~--~~~-~~~~~~~~~a~~~~~~~~~~~l~~~~~~~~~~p~~~~~~~~ 159 (371)
T cd01296 83 RAASEDELFASALRRLARMLRHGTTTVEVKSGY--GLD-LETELKMLRVIRRLKEEGPVDLVSTFLGAHAVPPEYKGREE 159 (371)
T ss_pred HhCCHHHHHHHHHHHHHHHHHCCceEEEecccC--CCC-HHHHHHHHHHHHHHHhhCCCceEeeeeecccCCcccCChHH
Confidence 467889999999999999999999999985211 111 0011123444555544445555543321 1110 0 01
Q ss_pred -----HHHHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEe
Q 013175 181 -----LADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHA 255 (448)
Q Consensus 181 -----~~~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa 255 (448)
..++.+.... . -...++|++..+. .++.+.++++++.|+++|+++++|+
T Consensus 160 ~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~A~~~g~~v~~H~ 213 (371)
T cd01296 160 YIDLVIEEVLPAVAE---E-NLADFCDVFCEKG----------------------AFSLEQSRRILEAAKEAGLPVKIHA 213 (371)
T ss_pred HHHHHHHHHHHHHHH---h-CCCCEEEEeecCC----------------------ccCHHHHHHHHHHHHHCCCeEEEEE
Confidence 1122211000 0 0123455543221 2457899999999999999999999
Q ss_pred cchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhH
Q 013175 256 IGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLF 335 (448)
Q Consensus 256 ~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~ 335 (448)
.+..... .++.+.. .+ ...++|+..+++++++++++.|+.+++||.+.. .++ ...+|+
T Consensus 214 ~e~~~~~----~~~~~~~-~g----~~~i~H~~~~~~~~i~~la~~g~~v~~~P~~~~--------~l~-----~~~~~~ 271 (371)
T cd01296 214 DELSNIG----GAELAAE-LG----ALSADHLEHTSDEGIAALAEAGTVAVLLPGTAF--------SLR-----ETYPPA 271 (371)
T ss_pred cCcCCCC----HHHHHHH-cC----CCeeHHhcCCCHHHHHHHHHcCCeEEEChHHHH--------HhC-----CCCCCH
Confidence 7643211 1111111 23 457899999999999999999999999998632 122 235789
Q ss_pred HHHHHcCCceeecCCC-CCCCC--CHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCC
Q 013175 336 QSLLANNALLALGSDW-PVADI--NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPG 412 (448)
Q Consensus 336 ~~~~~~Gv~v~~gSD~-p~~~~--~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~G 412 (448)
++++++|+++++|||+ |.... +++..+..++. ..+++++++++++|.|||+++|+++++|+|++|
T Consensus 272 ~~l~~~Gv~v~lgsD~~p~~~~~~~l~~~~~~~~~------------~~~l~~~~al~~aT~~~A~~lg~~~~~G~i~~G 339 (371)
T cd01296 272 RKLIDAGVPVALGTDFNPGSSPTSSMPLVMHLACR------------LMRMTPEEALTAATINAAAALGLGETVGSLEVG 339 (371)
T ss_pred HHHHHCCCcEEEecCCCCCCChHHHHHHHHHHHHH------------hcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCC
Confidence 9999999999999997 43321 24445554443 235899999999999999999998779999999
Q ss_pred CcccEEEecCCCCC-ChhhhccCeeeEEEECC
Q 013175 413 KIADFVILSTSSWE-DFAAEVSASIEATYVSG 443 (448)
Q Consensus 413 k~ADlvvld~d~~~-~~~~~~~~~v~~t~~~G 443 (448)
|.|||||+|.|++. .+.......|..||++|
T Consensus 340 ~~ADlvv~d~~~~~~~~~~~~~~~v~~v~~~G 371 (371)
T cd01296 340 KQADLVILDAPSYEHLAYRFGVNLVEYVIKNG 371 (371)
T ss_pred CCcCEEEECCCchHhhhhhcCCCCceEEEeCc
Confidence 99999999999876 33333456799999998
No 36
>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.
Probab=99.93 E-value=1.8e-24 Score=219.21 Aligned_cols=301 Identities=19% Similarity=0.177 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCc--chhhHHHHHHhcCCcCC
Q 013175 116 EALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE--TWSSLADLINKTGHVLS 193 (448)
Q Consensus 116 ~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~--~~~~~~~~~~~~~~~~~ 193 (448)
+.+..+++.++++|||||.||+.+.|.. ...+.++..... ..+...+++.++.... ....+.+......
T Consensus 71 e~~~~~~~~a~~~GvTtv~d~~~~~~~~----~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~---- 141 (447)
T cd01314 71 DDFESGTRAAAAGGTTTIIDFAIPNKGQ----SLLEAVEKWRGK-ADGKSVIDYGFHMIITDWTDSVIEELPELVK---- 141 (447)
T ss_pred chHHHHHHHHHhCCCcEEEeCCCCCCCC----CHHHHHHHHHHH-hcCCCcccEEEEEeecCCChHHHHHHHHHHH----
Confidence 4567777888899999999998543321 122222222211 1233334433322111 1111222211100
Q ss_pred CCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHH-----
Q 013175 194 DWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMY----- 268 (448)
Q Consensus 194 ~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~----- 268 (448)
....++|+|+.. ++...++++.++++++.|++.|.++++|++....++...+.+
T Consensus 142 --~g~~~ik~~~~~-------------------~~~~~~s~~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~g~ 200 (447)
T cd01314 142 --KGISSFKVFMAY-------------------KGLLMVDDEELLDVLKRAKELGALVMVHAENGDVIAELQKKLLAQGK 200 (447)
T ss_pred --cCCCEEEEEecc-------------------CCCCCCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHHHcCC
Confidence 112457877532 122245789999999999999999999996544333222211
Q ss_pred -------------------HHhHHhcCCCCCCCeEEecccCCh-hhHHHHHhCCc--EEeeccccccCchhHHH--HhcC
Q 013175 269 -------------------KSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQGI--VASMQPQHLLDDADSAR--KKLG 324 (448)
Q Consensus 269 -------------------~~~~~~~~~~~~r~~i~H~~~~~~-~~i~~~~~~gv--~~~~~P~~~~~~~~~~~--~~~g 324 (448)
.+.....+..+.+.++.|++.... +.++++++.|+ ++++||+|+..+.+.+. ...|
T Consensus 201 ~~~~~~~~~~p~~~e~~~v~~~~~la~~~~~~~~~~H~s~~~~~~~i~~~k~~g~~v~~~~~ph~l~~~~~~~~~~~~~g 280 (447)
T cd01314 201 TGPEYHALSRPPEVEAEATARAIRLAELAGAPLYIVHVSSKEAADEIARARKKGLPVYGETCPQYLLLDDSDYWKDWFEG 280 (447)
T ss_pred CChHHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEecCchhheeCHHHhccccccc
Confidence 112222234567899999986543 45777888775 55799999887655431 1112
Q ss_pred Hhhhhhhhhh---------HHHHHHcCCceeecCCCCCCCC--C-----HHHHHHHHHcCCCCCCCCCC---CCCCCCCH
Q 013175 325 VDRAERESYL---------FQSLLANNALLALGSDWPVADI--N-----PLCAIRTAMKRIPPGWDNAW---IPSERISL 385 (448)
Q Consensus 325 ~~r~~~~~~~---------~~~~~~~Gv~v~~gSD~p~~~~--~-----p~~~~~~a~~r~~~~~~~~~---~~~~~ls~ 385 (448)
. .. +.++| +.+++++|+++++|||+..... + +|.....++..........| .....+++
T Consensus 281 ~-~~-~~~pplr~~~~~~~l~~~l~~G~i~~igsDh~~~~~~~k~~~~~~~~~~~~G~~g~e~~l~~l~~~~~~~~~~~~ 358 (447)
T cd01314 281 A-KY-VCSPPLRPKEDQEALWDGLSSGTLQTVGSDHCPFNFAQKARGKDDFTKIPNGVPGVETRMPLLWSEGVAKGRITL 358 (447)
T ss_pred c-ce-EECCCCCChHHHHHHHHHHhCCCeeEEECCCCCCCHHHhhcccCCHhhCCCCCchHhhhHHHHHHHHHHcCCCCH
Confidence 1 11 33444 4589999999999999753211 1 11110000000000000000 11345999
Q ss_pred HHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC--Chhhh-------------ccCeeeEEEECCEEecC
Q 013175 386 TDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--DFAAE-------------VSASIEATYVSGVQAYP 448 (448)
Q Consensus 386 ~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~--~~~~~-------------~~~~v~~t~~~G~~V~~ 448 (448)
+++++++|.|||+++|+.+++|+|++|++|||||+|.+... +.+.+ ...+|..||++|++||.
T Consensus 359 ~~~~~~~t~~pA~~~gl~~~~G~l~~G~~AD~vi~d~~~~~~~~~~~~~~~~~~~~~~g~~~~g~v~~t~v~G~~v~~ 436 (447)
T cd01314 359 EKFVELTSTNPAKIFGLYPRKGTIAVGSDADLVIWDPNAEKTISADTHHHNVDYNIFEGMKVKGWPVVTISRGKVVVE 436 (447)
T ss_pred HHHHHHHhhHHHHHhCCCCCCCccCCCCcCCEEEEeCCcCEEecHHHhhccCCCCcccCeEEeeeEEEEEECCEEEEE
Confidence 99999999999999999777899999999999999987432 21111 13589999999999973
No 37
>TIGR02033 D-hydantoinase D-hydantoinase. This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.
Probab=99.92 E-value=3.3e-24 Score=217.95 Aligned_cols=295 Identities=18% Similarity=0.177 Sum_probs=180.6
Q ss_pred HHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCc--chhhHHHHHHhcCCcCC
Q 013175 116 EALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE--TWSSLADLINKTGHVLS 193 (448)
Q Consensus 116 ~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~--~~~~~~~~~~~~~~~~~ 193 (448)
+.+..+.+.++++|||||.||+++.|.. ...+.++..+... .+...+++.++.... ......+.......
T Consensus 71 e~~~~~s~~a~~~GvTtv~d~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 142 (454)
T TIGR02033 71 DDFFTGTKAAAAGGTTTIIDFALPHKGE----SLTEALETWHEKA-EGKSVIDYGFHMMITHWNDEVLEEHIPELVE--- 142 (454)
T ss_pred chHHHHHHHHHhCCCCEEEeCcCCCCCC----CHHHHHHHHHHHh-ccCceEEEEEEecccCCcHHHHHHHHHHHHh---
Confidence 4466667788899999999998643321 1222222222222 333445544332211 11112221111110
Q ss_pred CCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHH-------
Q 013175 194 DWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLD------- 266 (448)
Q Consensus 194 ~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~------- 266 (448)
.....+|+|.+.. +...++++.++++++.|+++|.++++|++.........+
T Consensus 143 --~g~~~ik~~~~~~-------------------~~~~~~~~~l~~~~~~a~~~~~~v~~H~E~~~~~~~~~~~~~~~G~ 201 (454)
T TIGR02033 143 --EGITSFKVFMAYK-------------------NLLMVDDEELFEILKRAKELGALLQVHAENGDVIAELQARLLAQGK 201 (454)
T ss_pred --cCCcEEEEEeecC-------------------CCCCCCHHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHHHHHcCC
Confidence 1134578776321 123467899999999999999999999965443322211
Q ss_pred -----------------HHHHhHHhcCCCCCCCeEEecccC-ChhhHHHHHhCC--cEEeeccccccCchhHHHH---hc
Q 013175 267 -----------------MYKSVVVTTGKRDQRFRIEHAQHL-ASGTAARFGDQG--IVASMQPQHLLDDADSARK---KL 323 (448)
Q Consensus 267 -----------------a~~~~~~~~~~~~~r~~i~H~~~~-~~~~i~~~~~~g--v~~~~~P~~~~~~~~~~~~---~~ 323 (448)
++++.....+..+.+.+++|++.. +.++++++++.| +++++||+|+.++.+.+.. +.
T Consensus 202 ~~~~~~~~~~p~~~e~~~v~~~~~~~~~~~~~~~i~H~s~~~~~~~i~~~~~~g~~vt~e~~p~~l~~~~~~~~~~~~~~ 281 (454)
T TIGR02033 202 TGPEYHALSRPPESEAEAVARAIALAALANAPLYVVHVSTASAVDEIAEAREKGQPVYGETCPQYLLLDDTIYDKPGFEG 281 (454)
T ss_pred CChhHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCchheeecHHHhcCccccc
Confidence 122222222345678899998874 357788888888 7788999998877654421 11
Q ss_pred CHhhhhhhhhh---------HHHHHHcCCceeecCCCCCCC--------CCHHH---------HHHHHHcCCCCCCCCCC
Q 013175 324 GVDRAERESYL---------FQSLLANNALLALGSDWPVAD--------INPLC---------AIRTAMKRIPPGWDNAW 377 (448)
Q Consensus 324 g~~r~~~~~~~---------~~~~~~~Gv~v~~gSD~p~~~--------~~p~~---------~~~~a~~r~~~~~~~~~ 377 (448)
+ .. +.++| +.++++.|+++++|||+.... ..+|. ++..+..-. ..
T Consensus 282 ~--~~-~~~pPlr~~~~~~~l~~~l~~G~i~~igtDh~p~~~~~k~~~~~~~~~~~~~G~~g~e~~l~~l~~------~~ 352 (454)
T TIGR02033 282 A--KY-VCSPPLREKEDQDALWSALSSGALQTVGSDHCPFNFAQKKAIGKDDFTKIPNGGPGVEERMTLLFD------EG 352 (454)
T ss_pred c--ee-EECCCCCChhhHHHHHHHhhcCCeEEEECCCCCCCHHHhhhcccCCHhhCCCCCchHHhHHHHHHH------HH
Confidence 1 11 34466 558999999999999974221 01221 111110000 00
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC--Chhhh-------------ccCeeeEEEEC
Q 013175 378 IPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--DFAAE-------------VSASIEATYVS 442 (448)
Q Consensus 378 ~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~--~~~~~-------------~~~~v~~t~~~ 442 (448)
.....++++++++++|.|||+++|+++++|+|++|++|||||+|.+... +.+.+ ...+|..||++
T Consensus 353 v~~~~~~~~~~~~~~t~~pa~~~gl~~~~G~l~~G~~AD~~i~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~t~v~ 432 (454)
T TIGR02033 353 VATGRITLEKFVELTSTNPAKIFNMYPRKGTIAVGSDADIVIWDPNRTTVISAETHHDNADYNPFEGFKVQGAVVSVLSR 432 (454)
T ss_pred HHcCCCCHHHHHHHHhhHHHHHcCCCCCCCccccCCcCCEEEEcCCcCeeechHHhhccCCCCcccCeEEeeeEEEEEEC
Confidence 1134589999999999999999999766899999999999999987432 21111 13589999999
Q ss_pred CEEecC
Q 013175 443 GVQAYP 448 (448)
Q Consensus 443 G~~V~~ 448 (448)
|++||.
T Consensus 433 G~~v~~ 438 (454)
T TIGR02033 433 GRVVVE 438 (454)
T ss_pred CEEEEE
Confidence 999973
No 38
>PRK09357 pyrC dihydroorotase; Validated
Probab=99.92 E-value=1.6e-23 Score=210.78 Aligned_cols=293 Identities=20% Similarity=0.200 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHH-HHHHHHhcCCCeeEEEEccCCc-c--hhhHHHHHHhcCC
Q 013175 115 REALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFAD-VYQWASYSEKMKIRVCLFFPLE-T--WSSLADLINKTGH 190 (448)
Q Consensus 115 ~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~irv~~~~~~~-~--~~~~~~~~~~~~~ 190 (448)
.+.+..+++.++++||||+.||+++.|.... ....+ ..+.....+ .+++..+..+. + ...+.++....
T Consensus 70 ~e~~~~~~~~a~~~GvTt~~d~~~~~p~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~-- 141 (423)
T PRK09357 70 KETIETGSRAAAAGGFTTVVAMPNTKPVIDT----PEVVEYVLDRAKEAG--LVDVLPVGAITKGLAGEELTEFGALK-- 141 (423)
T ss_pred cccHHHHHHHHHhCCCeEEEecCCCCCCCCc----HHHHHHHHHHhccCC--cccEEEEEEEEeCCCCccHHHHHHHH--
Confidence 4677888888899999999999865443221 12222 222222222 13343322111 0 01122221110
Q ss_pred cCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHH-------
Q 013175 191 VLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDL------- 263 (448)
Q Consensus 191 ~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~------- 263 (448)
-.|++.|.++ +....+++.++++++.+++.|.++++|+....-...
T Consensus 142 -------~~gv~~~~~~--------------------~~~~~~~~~l~~~~~~a~~~g~~v~iH~ee~~~~~~~~~~~g~ 194 (423)
T PRK09357 142 -------EAGVVAFSDD--------------------GIPVQDARLMRRALEYAKALDLLIAQHCEDPSLTEGGVMNEGE 194 (423)
T ss_pred -------hCCcEEEECC--------------------CcccCCHHHHHHHHHHHHhcCCEEEEeCCCHHHhhcccccCCh
Confidence 0234445432 112346788999999999999999999986432210
Q ss_pred --------------HHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHH-h--CCcEEeeccccccCchhHHHH-----
Q 013175 264 --------------VLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFG-D--QGIVASMQPQHLLDDADSARK----- 321 (448)
Q Consensus 264 --------------~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~-~--~gv~~~~~P~~~~~~~~~~~~----- 321 (448)
...++.+........+.+++|+|++.....++.+.+ + .++++++||+|++.+.+.+..
T Consensus 195 ~~~~~~~~~~p~~~E~~~i~~~~~la~~~g~~~hi~H~s~~~~~~~i~~a~~~g~~v~~e~~ph~L~~~~~~~~~~~~~~ 274 (423)
T PRK09357 195 VSARLGLPGIPAVAEEVMIARDVLLAEATGARVHICHVSTAGSVELIRWAKALGIKVTAEVTPHHLLLTDEDLLTYDPNY 274 (423)
T ss_pred hhHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEechHHheEcHHHHhCcCCce
Confidence 111222222222234578999999987655544443 3 458888999999877654321
Q ss_pred -hcCHhhhhhhhhhHHHHHHcCCceeecCCCCCCCCC----HH-------HHHHHHHcCCCCCCCCCCCCCCCCCHHHHH
Q 013175 322 -KLGVDRAERESYLFQSLLANNALLALGSDWPVADIN----PL-------CAIRTAMKRIPPGWDNAWIPSERISLTDAL 389 (448)
Q Consensus 322 -~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~~----p~-------~~~~~a~~r~~~~~~~~~~~~~~ls~~~al 389 (448)
..++.|..+...++.+++++|+++++|||++..+.+ +| .++...+.... ..+.....+++++++
T Consensus 275 k~~Pplr~~~~~~~l~~~l~~G~~~~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~----~~~~~~~~~~~~~~~ 350 (423)
T PRK09357 275 KVNPPLRTEEDREALIEGLKDGTIDAIATDHAPHAREEKECEFEAAPFGITGLETALSLLY----TTLVKTGLLDLEQLL 350 (423)
T ss_pred EECCCCCCHHHHHHHHHHHHcCCCeEEecCCCCCChHHccCCHhhCCCCceEHHHHHHHHH----HHHHHcCCCCHHHHH
Confidence 134455434567888999999999999998643221 11 11111111100 001124579999999
Q ss_pred HHHhHHHHHHcccCCCcccccCCCcccEEEecCCCC-C-Chhhhc-------------cCeeeEEEECCEEecC
Q 013175 390 IAHTLSAARACFLENDVGSLSPGKIADFVILSTSSW-E-DFAAEV-------------SASIEATYVSGVQAYP 448 (448)
Q Consensus 390 ~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~-~-~~~~~~-------------~~~v~~t~~~G~~V~~ 448 (448)
+++|.|||+++|+++ |+|++|++|||+|+|.+.. . +++.+. ..+|..||++|++||.
T Consensus 351 ~~~t~~~A~~~g~~~--G~i~~G~~AD~~i~d~~~~~~v~~~~~~~~~~~~p~~g~~~~g~v~~t~v~G~~v~~ 422 (423)
T PRK09357 351 EKMTINPARILGLPA--GPLAEGEPADLVIFDPEAEWTVDGEDFASKGKNTPFIGMKLKGKVVYTIVDGKIVYQ 422 (423)
T ss_pred HHHhHHHHHHhCCCC--CccCCCCcCCEEEEcCCCCEEEchhhcccCCCCCCCcCCEEeeEEEEEEECCEEEec
Confidence 999999999999974 9999999999999998754 3 333322 4579999999999984
No 39
>PRK13404 dihydropyrimidinase; Provisional
Probab=99.92 E-value=8.6e-24 Score=214.38 Aligned_cols=301 Identities=18% Similarity=0.137 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcc--hhhH-HHHHHhcCCc
Q 013175 115 REALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLET--WSSL-ADLINKTGHV 191 (448)
Q Consensus 115 ~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~--~~~~-~~~~~~~~~~ 191 (448)
.+.+.+.++.++++||||+.||+.+.+.. ...+.++..+.. .++...+.+.++..... .... .++.....
T Consensus 74 ~e~~~~~s~aa~~gGvTtv~~~~~~~~~~----~~~~~l~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~~~v~~l~~-- 146 (477)
T PRK13404 74 ADDFYTGTVSAAFGGTTTVIPFAAQHRGQ----SLREAVEDYHRR-AAGKAVIDYAFHLIVADPTEEVLTEELPALIA-- 146 (477)
T ss_pred cchHHHHHHHHHcCCccEEEEccCCCCCC----CHHHHHHHHHHH-hccCcEEEEEEEEEecCCChhhHHHHHHHHHH--
Confidence 47788899999999999999987533222 122323332222 23444566655432211 1111 12111110
Q ss_pred CCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHH-------
Q 013175 192 LSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLV------- 264 (448)
Q Consensus 192 ~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~------- 264 (448)
..+.++|+|++.. + ..+++++++++++.++++|.+|.+||++...++..
T Consensus 147 ----~G~~~iKi~~~~~-------------------~-~~~~~~~l~~~~~~a~~~g~~V~~Hae~~~~i~~~~~~~~~~ 202 (477)
T PRK13404 147 ----QGYTSFKVFMTYD-------------------D-LKLDDRQILDVLAVARRHGAMVMVHAENHDMIAWLTKRLLAA 202 (477)
T ss_pred ----cCCCEEEEEecCC-------------------C-CCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHC
Confidence 2356789997421 1 23577899999999999999999999976654311
Q ss_pred -----------------HHHHHHhHHhcCCCCCCCeEEecccCCh-hhHHHHHhCC--cEEeeccccccCchhHHHHh--
Q 013175 265 -----------------LDMYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARKK-- 322 (448)
Q Consensus 265 -----------------l~a~~~~~~~~~~~~~r~~i~H~~~~~~-~~i~~~~~~g--v~~~~~P~~~~~~~~~~~~~-- 322 (448)
..++.+........+.+.+|.|++.... +.+..+++.| +++++||+|++++.+.+...
T Consensus 203 G~~~~~~~~~~rp~~~E~~~v~~~~~la~~~g~~~hi~Hvs~~~~~~~i~~~k~~g~~vt~e~~ph~L~l~~~~~~~~~~ 282 (477)
T PRK13404 203 GLTAPKYHAISRPMLAEREATHRAIALAELVDVPILIVHVSGREAAEQIRRARGRGLKIFAETCPQYLFLTAEDLDRPGM 282 (477)
T ss_pred CCcchhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEChhhhccCHHHhcCccc
Confidence 1122222222223567899999985432 4555566666 78899999999876654321
Q ss_pred cCHhhhhhhhhh---------HHHHHHcCCceeecCCCCCCCC------------CHHHHHHHHHcCCCCCCCCC---CC
Q 013175 323 LGVDRAERESYL---------FQSLLANNALLALGSDWPVADI------------NPLCAIRTAMKRIPPGWDNA---WI 378 (448)
Q Consensus 323 ~g~~r~~~~~~~---------~~~~~~~Gv~v~~gSD~p~~~~------------~p~~~~~~a~~r~~~~~~~~---~~ 378 (448)
.|. .. +.+|| +.+.+..|.+.+++||+..... .+|.....++.......... ..
T Consensus 283 ~g~-~~-k~~Pplr~~~d~~aL~~~l~~G~id~i~sDHap~~~~eK~~~~~~~~~~~~~~~~~G~~gie~~l~~ll~~~v 360 (477)
T PRK13404 283 EGA-KY-ICSPPPRDKANQEAIWNGLADGTFEVFSSDHAPFRFDDTDGKLAAGANPSFKAIANGIPGIETRLPLLFSEGV 360 (477)
T ss_pred cCC-ce-EECCCCCChHHHHHHHHHHhCCCceEEecCCCCCCcccchhhhhccCCCCHhhCCCCcccHHHHHHHHHHHHH
Confidence 222 12 33444 4457888999999999742211 02221111111100000000 01
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC--Chhhh-------------ccCeeeEEEECC
Q 013175 379 PSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--DFAAE-------------VSASIEATYVSG 443 (448)
Q Consensus 379 ~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~--~~~~~-------------~~~~v~~t~~~G 443 (448)
....++++++++++|.|||+++|+.+.+|+|++|+.||||++|.+... ..+.+ ...+|..||++|
T Consensus 361 ~~~~ls~~~~~~~~t~~pA~~lgl~~~~G~i~~G~~ADlvivd~~~~~~v~~~~~~~~~~~sp~~g~~~~g~v~~tiv~G 440 (477)
T PRK13404 361 VKGRISLNRFVALTSTNPAKLYGLYPRKGAIAIGADADIAIWDPDREVTITNADLHHAADYTPYEGMRVTGWPVTVLSRG 440 (477)
T ss_pred HcCCCCHHHHHHHHHHHHHHHhCCCCCCceecCCCcCCEEEEcCCccEEEchHHhcccCCCCcccceEEeeeEEEEEECC
Confidence 234699999999999999999999656899999999999999987432 22211 135688999999
Q ss_pred EEecC
Q 013175 444 VQAYP 448 (448)
Q Consensus 444 ~~V~~ 448 (448)
++||+
T Consensus 441 ~vv~~ 445 (477)
T PRK13404 441 RVVVE 445 (477)
T ss_pred EEEEE
Confidence 99973
No 40
>PRK07572 cytosine deaminase; Validated
Probab=99.91 E-value=3.9e-23 Score=207.53 Aligned_cols=311 Identities=19% Similarity=0.197 Sum_probs=190.9
Q ss_pred CchhHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHhcCcceeEeCccC-CCCCccccchHHHHHHHHHHHhcCCCeeEE
Q 013175 91 TGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRY-YPGESVQLSWEDFADVYQWASYSEKMKIRV 169 (448)
Q Consensus 91 tG~l~e~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~irv 169 (448)
.|.+.|. +.......+.+++++++.....+++++++.|+|+|+|+... .+. ...+....+ .+.. -...+.+.+
T Consensus 74 ~g~l~e~-l~~~~~~~~~~t~edl~~~a~~~~~e~l~~G~Ttvrd~~d~~~~~---~~~~~a~~~-~~~~-~~~~~~~~~ 147 (426)
T PRK07572 74 SGTLLEG-IALWGELKPLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDPR---LLAVEALLE-VRER-VAPYLDLQL 147 (426)
T ss_pred CCCHHHH-HHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEeeccccCCCc---ccHHHHHHH-HHHH-hhccceEEE
Confidence 4666663 34444455678999999999999999999999999998532 111 112222111 1111 112233333
Q ss_pred EEccCCcch--hhHHHHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHC
Q 013175 170 CLFFPLETW--SSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKS 247 (448)
Q Consensus 170 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~ 247 (448)
..+.....+ ....+..++. ++ .|+.++ -|. |+.+.. ...+.++++.+++.|+++
T Consensus 148 ~a~~~~g~~~~~~~~~~~~~~-------l~-~g~d~i-Gg~----------p~~~~~-----~~~~~e~l~~~~~~A~~~ 203 (426)
T PRK07572 148 VAFPQDGVLRSPGAVDNLERA-------LD-MGVDVV-GGI----------PHFERT-----MADGAESVRLLCEIAAER 203 (426)
T ss_pred EeccChhhccCccHHHHHHHH-------HH-cCCCEE-eCC----------CCCccc-----cchHHHHHHHHHHHHHHc
Confidence 322210000 0011111110 11 112222 011 222110 012358999999999999
Q ss_pred CCcEEEEe-cchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCCh-------hhHHHHHhCCcEEeeccccccCchhHH
Q 013175 248 GLQVAIHA-IGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-------GTAARFGDQGIVASMQPQHLLDDADSA 319 (448)
Q Consensus 248 g~~v~iHa-~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~-------~~i~~~~~~gv~~~~~P~~~~~~~~~~ 319 (448)
|+++++|+ ++...+...++.+.......|..+ +..++||..++. ++++++++.|+.+++||........
T Consensus 204 g~~v~~H~~e~~~~~~~~~~~~~~~~~~~G~~~-~v~~~H~~~l~~~~~~~~~~~~~~la~~g~~vv~~P~~n~~l~~-- 280 (426)
T PRK07572 204 GLRVDMHCDESDDPLSRHIETLAAETQRLGLQG-RVAGSHLTSMHSMDNYYVSKLIPLMAEAGVNAIANPLINITLQG-- 280 (426)
T ss_pred CCCeEEEECCCCChhHHHHHHHHHHHHHhCCCC-CEEEEccchhhcCCHHHHHHHHHHHHHcCCeEEECchhhhhhcC--
Confidence 99999999 445555555555544445567655 788999987664 6699999999999999975321000
Q ss_pred HHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCC------CCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHh
Q 013175 320 RKKLGVDRAERESYLFQSLLANNALLALGSDWPV------ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHT 393 (448)
Q Consensus 320 ~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~------~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T 393 (448)
..-+.... +...|+++++++|+++++|||++. ...+++..+..+..... +.+. ..+.++|+++|
T Consensus 281 -~~~~~~~~-~g~~~v~~l~~~GV~v~lGtD~~~~~~~~~~~~~~~e~~~~~~~~~~------~~~~--~~l~~~l~~aT 350 (426)
T PRK07572 281 -RHDTYPKR-RGMTRVPELMAAGINVAFGHDCVMDPWYSLGSGDMLEVAHMGLHVAQ------MTGQ--DAMRACFDAVT 350 (426)
T ss_pred -CCCCCCCC-CCCcCHHHHHHCCCcEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHc------CCCH--HHHHHHHHHhh
Confidence 00000001 346789999999999999999742 23567777665432110 0111 24578889999
Q ss_pred HHHHHHcccCCCcccccCCCcccEEEec-CCCCCChhhhccCeeeEEEECCEEecC
Q 013175 394 LSAARACFLENDVGSLSPGKIADFVILS-TSSWEDFAAEVSASIEATYVSGVQAYP 448 (448)
Q Consensus 394 ~n~A~~~g~~~~~Gsi~~Gk~ADlvvld-~d~~~~~~~~~~~~v~~t~~~G~~V~~ 448 (448)
.|||+++|+++ .| |++||.||||++| .+|+..... ..++..||++|++||+
T Consensus 351 ~~~A~~lgl~~-~g-i~~G~~ADlvl~d~~~p~e~i~~--~~~~~~V~~~G~~v~~ 402 (426)
T PRK07572 351 VNPARIMGLEG-YG-LEPGCNADLVLLQARDPIEAIRL--RAARLAVIRRGKVIAR 402 (426)
T ss_pred cchHHhhCCCC-cC-CCCCCcCCEEEEeCCCHHHHHHh--cCCceEEEECCEEEec
Confidence 99999999987 67 9999999999999 477553222 2358899999999974
No 41
>PRK06189 allantoinase; Provisional
Probab=99.91 E-value=9.8e-23 Score=206.04 Aligned_cols=300 Identities=17% Similarity=0.142 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHhcCcceeEeCc-cCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCc--chhhHHHHHHhcCC
Q 013175 114 RREALLRASNLALSRGVTTVVDFG-RYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE--TWSSLADLINKTGH 190 (448)
Q Consensus 114 ~~~~~~~~~~~~~~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~--~~~~~~~~~~~~~~ 190 (448)
.++.+.++.+.++++||||+.+|+ ++.|..... +.+....+. .+....+++.++.... ....+.++.+
T Consensus 70 ~~~~~~~~~~aa~~gGvTt~~~~p~~t~p~~~~~----~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~l~~l~~---- 140 (451)
T PRK06189 70 HWEGFATGSAALAAGGCTTYFDMPLNSIPPTVTR----EALDAKAEL-ARQKSAVDFALWGGLVPGNLEHLRELAE---- 140 (451)
T ss_pred CcccHHHHHHHHHhCCEEEEEECCCCCCCCCCcH----HHHHHHHHH-hCcCceEeEEEEecccccCHHHHHHHHH----
Confidence 356788889999999999999997 333433321 112222222 1334456666543221 1222222211
Q ss_pred cCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHH-------
Q 013175 191 VLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDL------- 263 (448)
Q Consensus 191 ~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~------- 263 (448)
..+.++|+|++... ..+.+..++..+.++++.+.+.|..+.+||+.+.-+..
T Consensus 141 -----~Gv~~~k~f~~~~~----------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~e~~~~~~~~~~~~~~ 199 (451)
T PRK06189 141 -----AGVIGFKAFMSNSG----------------TDEFRSSDDLTLYEGMKEIAALGKILALHAESDALTRHLTTQARQ 199 (451)
T ss_pred -----cCCcEEEEEccccC----------------CCCcCcCCHHHHHHHHHHHHhcCCeEEEECCChHHHHHHHHHHHh
Confidence 12557888864321 01222356778999999999999999999986542221
Q ss_pred -----------------HHHHHHHhHHhcCCCCCCCeEEecccCCh-hhHHHHHhCC--cEEeeccccccCchhHHHHh-
Q 013175 264 -----------------VLDMYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARKK- 322 (448)
Q Consensus 264 -----------------~l~a~~~~~~~~~~~~~r~~i~H~~~~~~-~~i~~~~~~g--v~~~~~P~~~~~~~~~~~~~- 322 (448)
...++.+........+.+.+|.|++.... +.+.++++.| +++++||+|++.+.+.+...
T Consensus 200 ~g~~~~~~~~~~~P~~~E~~~v~~~l~la~~~g~~~hi~HiSt~~~~~~i~~~k~~g~~vt~ev~ph~L~l~~~~~~~~~ 279 (451)
T PRK06189 200 QGKTDVRDYLESRPVVAELEAVQRALLYAQETGCPLHFVHISSGKAVALIAEAKKRGVDVSVETCPHYLLFTEEDFERIG 279 (451)
T ss_pred cCCCChhHccccCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEeCHHHhhcCHhHhhCcC
Confidence 11122222222223456899999886543 4555556565 88999999998776544321
Q ss_pred -----cCHhhhhhhhhhHHHHHHcCCceeecCCCC-CCCC----CHHHH-------HHHHHcCCCCCCCCCCCCCCCCCH
Q 013175 323 -----LGVDRAERESYLFQSLLANNALLALGSDWP-VADI----NPLCA-------IRTAMKRIPPGWDNAWIPSERISL 385 (448)
Q Consensus 323 -----~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p-~~~~----~p~~~-------~~~a~~r~~~~~~~~~~~~~~ls~ 385 (448)
.++-|......++.+++++|++++++||+. ..+. .++.. +...+.... . ....+..+++
T Consensus 280 ~~~~~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~---~-~~~~~~~l~~ 355 (451)
T PRK06189 280 AVAKCAPPLRSRSQKEELWRGLLAGEIDMISSDHSPCPPELKEGDDFFLVWGGISGGQSTLLVML---T-EGYIERGIPL 355 (451)
T ss_pred CceEEeCCCCChhhHHHHHHHHhCCCceEEECCCCCCCHHHcCcCCcccCCCCceeHHHHHHHHH---H-HHHhcCCCCH
Confidence 122222122345566899999999999974 2211 11110 111000000 0 0012446999
Q ss_pred HHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCC-CCC-Chhhh-------------ccCeeeEEEECCEEecC
Q 013175 386 TDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTS-SWE-DFAAE-------------VSASIEATYVSGVQAYP 448 (448)
Q Consensus 386 ~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d-~~~-~~~~~-------------~~~~v~~t~~~G~~V~~ 448 (448)
+++++++|.|||+++|++ .+|+|++|++|||||+|.+ ++. ..+++ ...+|..||++|++||+
T Consensus 356 ~~~~~~~t~npA~~lgl~-~~G~l~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~tiv~G~~v~~ 432 (451)
T PRK06189 356 ETIARLLATNPAKRFGLP-QKGRLEVGADADFVLVDLDETYTLTKEDLFYRHKQSPYEGRTFPGRVVATYLRGQCVYQ 432 (451)
T ss_pred HHHHHHHhhhHHHHhCCC-CCCcccCCCcCCEEEEcCCCCEEECHHHhhhcCCCCCcCCcEEEeEEEEEEECCEEEEE
Confidence 999999999999999995 4799999999999999986 333 22222 13579999999999973
No 42
>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=99.91 E-value=5.3e-23 Score=207.76 Aligned_cols=298 Identities=18% Similarity=0.198 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHHhcCcceeEeCc-cCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcchhhHHHHHHhcCCcCC
Q 013175 115 REALLRASNLALSRGVTTVVDFG-RYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLS 193 (448)
Q Consensus 115 ~~~~~~~~~~~~~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~~~~~~~~~~~~~~~~ 193 (448)
++.+.++.+.++++||||+.||+ ++.|.... . +.+....+.. .....+++.++..... ....++.....
T Consensus 68 ~~~~~~~~~~~~~gGvTtv~dmp~~~~p~~~~---~-~~~~~~~~~~-~~~~~~d~~~~~~~~~-~~~~~i~~~~~---- 137 (443)
T TIGR03178 68 WEGFETGTRAAAAGGITTYIDMPLNSIPATTT---R-ASLEAKFEAA-KGKLAVDVGFWGGLVP-YNLDDLRELDE---- 137 (443)
T ss_pred cchHHHHHHHHHcCCeEEEEECCCCCCCCCCc---H-HHHHHHHHHh-ccCCceeEEEEeccCC-CCHHHHHHHHH----
Confidence 45688888999999999999997 33343321 1 1111111111 2234566655432211 12222211110
Q ss_pred CCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHH----------
Q 013175 194 DWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDL---------- 263 (448)
Q Consensus 194 ~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~---------- 263 (448)
..+.++|+|++.... .+....+++.+.++++.+++.|+++++|++.+..+..
T Consensus 138 --~G~~~ik~~~~~~~~----------------~~~~~~~~~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~g~ 199 (443)
T TIGR03178 138 --AGVVGFKAFLSPSGD----------------DEFPHVDDWQLYKGMRELARLGQLLLVHAENPAITSALGEEAPPQGG 199 (443)
T ss_pred --CCCcEEEEEecccCC----------------CCcccCCHHHHHHHHHHHHhcCCeEEEeccChHHHHHHHHHHHhcCC
Confidence 124578888643200 1122467889999999999999999999876543221
Q ss_pred --------------HHHHHHHhHHhcCCCCCCCeEEecccCC-hhhHHHHHhCC--cEEeeccccccCchhHHHHhcCHh
Q 013175 264 --------------VLDMYKSVVVTTGKRDQRFRIEHAQHLA-SGTAARFGDQG--IVASMQPQHLLDDADSARKKLGVD 326 (448)
Q Consensus 264 --------------~l~a~~~~~~~~~~~~~r~~i~H~~~~~-~~~i~~~~~~g--v~~~~~P~~~~~~~~~~~~~~g~~ 326 (448)
...++.++.......+.+.++.|.+... -+.++.+++.| +++++||+|+..+.+.+.. .|.
T Consensus 200 ~~~~~~~~~~p~~ae~~~~~~~~~la~~~g~~vhi~Hiss~~~~~~i~~~~~~g~~it~e~~ph~l~l~~~~~~~-~~~- 277 (443)
T TIGR03178 200 VGADAYLASRPVFAEVEAIRRTLALAKVTGCRVHVVHLSSAEAVELITEAKQEGLDVTVETCPHYLTLTAEEVPD-GGT- 277 (443)
T ss_pred CChhHhcCcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEECccceEecHHHhhC-cCc-
Confidence 1122333322222245789999988643 35556666666 6778899998876654422 221
Q ss_pred hhhhhhhhH---------HHHHHcCCceeecCCC-CCCC----CCHHHH-------HHHHHcCCCCCCCCCCCCCCCCCH
Q 013175 327 RAERESYLF---------QSLLANNALLALGSDW-PVAD----INPLCA-------IRTAMKRIPPGWDNAWIPSERISL 385 (448)
Q Consensus 327 r~~~~~~~~---------~~~~~~Gv~v~~gSD~-p~~~----~~p~~~-------~~~a~~r~~~~~~~~~~~~~~ls~ 385 (448)
.+ +..||+ .+.++.|.+.+++||+ |.+. ..+|.. +...+.... .....+.++++
T Consensus 278 ~~-~~~Pplr~~~~~~~l~~~l~~G~i~~i~SDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~----~~~~~~~~l~~ 352 (443)
T TIGR03178 278 LA-KCAPPIRDLANQEGLWEALLNGLIDCVVSDHSPCTPDLKRAGDFFKAWGGIAGLQSTLDVMF----DEAVQKRGLPL 352 (443)
T ss_pred ce-EEcCCCCChHHHHHHHHHHHcCCccEEeCCCCCCChHHcCcCChhhCCCCeeEHHHhHHHHH----HHHHHhcCCCH
Confidence 12 334444 3457889999999998 4431 111110 000000000 00112456999
Q ss_pred HHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCC-CCC-Chhhh-------------ccCeeeEEEECCEEecC
Q 013175 386 TDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTS-SWE-DFAAE-------------VSASIEATYVSGVQAYP 448 (448)
Q Consensus 386 ~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d-~~~-~~~~~-------------~~~~v~~t~~~G~~V~~ 448 (448)
+++++++|.|||+++|+. .+|+|++|+.|||||+|.+ ++. ++..+ ...+|..||++|++||.
T Consensus 353 ~~~~~~~t~~pA~~~g~~-~~G~l~~G~~Ad~vi~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~t~v~G~~v~~ 429 (443)
T TIGR03178 353 EDIARLMATNPAKRFGLA-QKGRIAPGKDADFVFVDPDESYTLTPDDLYYRHKVSPYVGRTIGGRVRATYLRGQCIYD 429 (443)
T ss_pred HHHHHHHhHHHHHHcCCC-CCCccCCCCcCCEEEEcCCCcEEEcHHHhhhcCCCCCcCCcEEeeEEEEEEECCEEEEE
Confidence 999999999999999994 4799999999999999986 443 33222 13579999999999973
No 43
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=99.91 E-value=8e-23 Score=204.36 Aligned_cols=196 Identities=22% Similarity=0.130 Sum_probs=141.9
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEecch--H---HHHHHHHHHHHhHHhcCCCCCCCeEEecccCCh-------hhHHHH
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAIGD--R---ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-------GTAARF 298 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~gd--~---a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~-------~~i~~~ 298 (448)
.++++.++++++.|+++|+++++|+.+. . .++..++.++ ..+.. .++.++|+..++. +.++++
T Consensus 185 ~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~----~~g~~-~~~~i~H~~~~~~~~~~~~~~~~~~l 259 (398)
T cd01293 185 EDGEESLDTLFELAQEHGLDIDLHLDETDDPGSRTLEELAEEAE----RRGMQ-GRVTCSHATALGSLPEAEVSRLADLL 259 (398)
T ss_pred ccHHHHHHHHHHHHHHhCCCCEEEeCCCCCcchhHHHHHHHHHH----HhCCC-CCEEeeecchhhcCCHHHHHHHHHHH
Confidence 4578999999999999999999998532 2 2222222222 23433 5789999998762 459999
Q ss_pred HhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCC------CCCCCHHHHHHHHHcCCCCC
Q 013175 299 GDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP------VADINPLCAIRTAMKRIPPG 372 (448)
Q Consensus 299 ~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p------~~~~~p~~~~~~a~~r~~~~ 372 (448)
++.|+.+++||.+....... ...++ +. ...+|++.++++|+++++|||++ ....+++..+..++.+...
T Consensus 260 ~~~g~~v~~~p~s~~~l~~~-~~~~~--~~-~~~~~~~~~~~~Gv~v~lGTD~~~~~~~~~~~~~~~~~~~~~~~~~~~- 334 (398)
T cd01293 260 AEAGISVVSLPPINLYLQGR-EDTTP--KR-RGVTPVKELRAAGVNVALGSDNVRDPWYPFGSGDMLEVANLAAHIAQL- 334 (398)
T ss_pred HHcCCeEEeCCCcchhhccc-ccCCC--CC-CCCCcHHHHHHCCCeEEECCCCCCCCCcCCCCCCHHHHHHHHHHHHcC-
Confidence 99999999999864321100 01111 11 35689999999999999999973 2345788888876543321
Q ss_pred CCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCeeeEEEECCEEe
Q 013175 373 WDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQA 446 (448)
Q Consensus 373 ~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v~~t~~~G~~V 446 (448)
.+ ..+.+++|+++|.|+|+++|+ +.|+|+|||.||||++|.|++.+.... ..++..||++|++|
T Consensus 335 -----~~--~~~~~~al~~aT~~~A~~lg~--~~G~l~~Gk~ADlv~~d~~~~~~~~~~-~~~~~~v~~~G~~~ 398 (398)
T cd01293 335 -----GT--PEDLALALDLITGNAARALGL--EDYGIKVGCPADLVLLDAEDVAEAVAR-QPPRRVVIRKGRVV 398 (398)
T ss_pred -----CC--hhhHHHHHHhcChhhhhhcCC--cCcccccCCcceEEEECCCCHHHHHhc-CCCccEEEECCEEC
Confidence 11 135689999999999999999 379999999999999999986532222 34799999999975
No 44
>PRK08323 phenylhydantoinase; Validated
Probab=99.91 E-value=1.7e-22 Score=205.57 Aligned_cols=296 Identities=17% Similarity=0.140 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCc--chhhHHHHHHhcCCcC
Q 013175 115 REALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE--TWSSLADLINKTGHVL 192 (448)
Q Consensus 115 ~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~--~~~~~~~~~~~~~~~~ 192 (448)
.+.+..+.+.++++||||+.||+.+.|.. ...+.++...... .+...+++.++.... ......++.....
T Consensus 68 ~e~~~~~~~~a~~~GvTt~~d~~~~~~~~----~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--- 139 (459)
T PRK08323 68 SDDFETGTRAAACGGTTTIIDFALQPKGQ----SLREALEAWHGKA-AGKAVIDYGFHMIITDWNEVVLDEMPELVE--- 139 (459)
T ss_pred cCcHHHHHHHHHhCCCCEEEeCcCCCCCC----ChHHHHHHHHHHh-ccCceEEEEEEEEecCCcHHHHHHHHHHHH---
Confidence 34566677888899999999997543221 2223333333221 334455554432211 1111222211110
Q ss_pred CCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHH-------
Q 013175 193 SDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVL------- 265 (448)
Q Consensus 193 ~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l------- 265 (448)
..+.++|+|++.. +....++++++++++.|+++|.++++|++....++...
T Consensus 140 ---~g~~~ik~~~~~~-------------------~~~~~s~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g 197 (459)
T PRK08323 140 ---EGITSFKLFMAYK-------------------GALMLDDDELLRALQRAAELGALPMVHAENGDAIAYLQAKLLAEG 197 (459)
T ss_pred ---cCCCEEEEEEecC-------------------CCCCCCHHHHHHHHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcC
Confidence 1124578776321 22346789999999999999999999997654433221
Q ss_pred -----------------HHHHHhHHhcCCCCCCCeEEecccC-ChhhHHHHHhCC--cEEeeccccccCchhHHHHh---
Q 013175 266 -----------------DMYKSVVVTTGKRDQRFRIEHAQHL-ASGTAARFGDQG--IVASMQPQHLLDDADSARKK--- 322 (448)
Q Consensus 266 -----------------~a~~~~~~~~~~~~~r~~i~H~~~~-~~~~i~~~~~~g--v~~~~~P~~~~~~~~~~~~~--- 322 (448)
.+++++....+..+.+.+|.|++.. +-+.++.+++.| +++++||+|++.+...+...
T Consensus 198 ~~~~~~~~~~~p~~~e~~~v~~~~~~a~~~~~~~~i~H~s~~~~~~~i~~ak~~g~~vt~e~~p~~l~l~~~~~~~~~~~ 277 (459)
T PRK08323 198 KTGPEYHALSRPPEVEGEATNRAIMLAELAGAPLYIVHVSCKEALEAIRRARARGQRVFGETCPQYLLLDESEYDGPDWF 277 (459)
T ss_pred CCChhhhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEEcCccceeecHHHhcCCccc
Confidence 2233333333445679999999865 345677778887 55789999988765433211
Q ss_pred cCHhhhhhhhhh---------HHHHHHcCCceeecCCCCCCCC--C------HH---------HHHHHHHcCCCCCCCCC
Q 013175 323 LGVDRAERESYL---------FQSLLANNALLALGSDWPVADI--N------PL---------CAIRTAMKRIPPGWDNA 376 (448)
Q Consensus 323 ~g~~r~~~~~~~---------~~~~~~~Gv~v~~gSD~p~~~~--~------p~---------~~~~~a~~r~~~~~~~~ 376 (448)
.|. +. +.++| +.+++++|+++++|||+..... + +| ..+..++... .
T Consensus 278 ~g~-~~-k~~pPlr~~~~~~~l~~~l~~G~i~~i~sDh~p~~~~~~~~~~~~~~~~~p~G~~~~e~~~~~l~~------~ 349 (459)
T PRK08323 278 EGA-KY-VMSPPLRDKEHQDALWRGLQDGDLQVVATDHCPFCFEQKKQLGRGDFTKIPNGTPGVEDRMPLLFS------E 349 (459)
T ss_pred ccc-ce-EECCCCCChHHHHHHHHHhhcCCeeEEECCCCCCChHHhcccccCCHhhCCCCcchHhhhHHHHHH------H
Confidence 121 11 23344 6689999999999999743211 0 11 1111100000 0
Q ss_pred CCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCC-C-Chhhh-------------ccCeeeEEEE
Q 013175 377 WIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSW-E-DFAAE-------------VSASIEATYV 441 (448)
Q Consensus 377 ~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~-~-~~~~~-------------~~~~v~~t~~ 441 (448)
......++++++++++|.|||+++|+.+++|+|++|+.|||||+|.+.. . +.+++ ...+|..||+
T Consensus 350 ~~~~~~~~~~~~~~~~t~~pA~~lgl~~~~G~l~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~s~~~g~~~~g~v~~viv 429 (459)
T PRK08323 350 GVMTGRITLNRFVELTSTNPAKIFGLYPRKGTIAVGADADIVIWDPNATKTISASTLHSNVDYNPYEGFEVTGWPVTTLS 429 (459)
T ss_pred HHHcCCCCHHHHHHHHhhHHHHHhCCCCCCcccCCCCcCCEEEEcCCcccccCHHHHhhcCCCCcccCcEEeeeEEEEEE
Confidence 0123458999999999999999999966689999999999999998742 2 21111 1357899999
Q ss_pred CCEEecC
Q 013175 442 SGVQAYP 448 (448)
Q Consensus 442 ~G~~V~~ 448 (448)
+|++||.
T Consensus 430 ~G~~v~~ 436 (459)
T PRK08323 430 RGEVVVE 436 (459)
T ss_pred CCEEEEE
Confidence 9999973
No 45
>PRK09059 dihydroorotase; Validated
Probab=99.91 E-value=1e-22 Score=203.65 Aligned_cols=292 Identities=15% Similarity=0.140 Sum_probs=182.2
Q ss_pred HHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcc---hhhHHHHHHhcC
Q 013175 113 ERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLET---WSSLADLINKTG 189 (448)
Q Consensus 113 ~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~---~~~~~~~~~~~~ 189 (448)
+.++.+...++.++++||||+.+|++..|..... +.+..+.+.. ++...+++.++..... ...+.++...
T Consensus 75 ~~~e~~~~~s~aa~~gGvTtv~~~p~~~p~~~~~----~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~~~~l~e~~~l-- 147 (429)
T PRK09059 75 EHRETIASASRAAAAGGVTSIIMMPDTDPVIDDV----ALVEFVKRTA-RDTAIVNIHPAAAITKGLAGEEMTEFGLL-- 147 (429)
T ss_pred hhhhhHHHHHHHHHhCCcEEEEeccCCCCCCCCH----HHHHHHHHHh-cccCcccEEEEeEEecCCCCcchHHHHHH--
Confidence 4567888999999999999999998755443321 2222222222 2345677766543321 1123332211
Q ss_pred CcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHH-------
Q 013175 190 HVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRAND------- 262 (448)
Q Consensus 190 ~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~------- 262 (448)
.-.|++.|.++. ....+...+.++++.+.+.|.++.+||+....++
T Consensus 148 -------~~~Gv~~f~~~~--------------------~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~~~~ 200 (429)
T PRK09059 148 -------RAAGAVAFTDGR--------------------RSVANTQVMRRALTYARDFDAVIVHETRDPDLGGNGVMNEG 200 (429)
T ss_pred -------HhcCcEEEecCC--------------------cccCCHHHHHHHHHHHHhcCCEEEEecCChhhhcCCCcCCc
Confidence 113566665431 1123456788999999999999999998654211
Q ss_pred --------------HHHHHHHHhHHhcCCCCCCCeEEecccCCh-hhHHHHHhCC--cEEeeccccccCchhHHHHhcCH
Q 013175 263 --------------LVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARKKLGV 325 (448)
Q Consensus 263 --------------~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~-~~i~~~~~~g--v~~~~~P~~~~~~~~~~~~~~g~ 325 (448)
....++.++.......+.+.+|.|++.... +.+.++++.| +++++||+|++++.+.+.. ++.
T Consensus 201 ~~~~~~~~~~rP~~aE~~av~r~~~la~~~~~~~hi~hvs~~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~-~~~ 279 (429)
T PRK09059 201 LFASWLGLSGIPREAEVIPLERDLRLAALTRGRYHAAQISCAESAEALRRAKDRGLKVTAGVSINHLSLNENDIGE-YRT 279 (429)
T ss_pred HHHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEecCCHHHHHHHHHHHHCCCCEEEeecHHHHhccHHHHhc-cCC
Confidence 012233333322223467899999886543 4455555555 8889999999987665432 332
Q ss_pred hhhhhhhhhHH---------HHHHcCCceeecCCCC-CCCC---CHHH-------HHHHHHcCCCCCCCCCCCCCCCCCH
Q 013175 326 DRAERESYLFQ---------SLLANNALLALGSDWP-VADI---NPLC-------AIRTAMKRIPPGWDNAWIPSERISL 385 (448)
Q Consensus 326 ~r~~~~~~~~~---------~~~~~Gv~v~~gSD~p-~~~~---~p~~-------~~~~a~~r~~~~~~~~~~~~~~ls~ 385 (448)
+. +.+||+| +.+..|.+.+++||+. .+.. .||. ++...+.... .......+++
T Consensus 280 -~~-kvnPPLR~~~d~~~L~~~l~~g~id~i~sDh~p~~~~~K~~~~~~~~~G~~gle~~l~~~~-----~~v~~~~l~l 352 (429)
T PRK09059 280 -FF-KLSPPLRTEDDRVAMVEAVASGTIDIIVSSHDPQDVDTKRLPFSEAAAGAIGLETLLAAAL-----RLYHNGEVPL 352 (429)
T ss_pred -cc-EEcCCCCCHHHHHHHHHHHHcCCCcEEEeCCCCCCHHHCcCChhhCCCCcccHHHHHHHHH-----HHHHcCCCCH
Confidence 23 5666766 4567799999999963 3210 0221 1111111000 0112446899
Q ss_pred HHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCC-C-Chhhh-------------ccCeeeEEEECCEEecC
Q 013175 386 TDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSW-E-DFAAE-------------VSASIEATYVSGVQAYP 448 (448)
Q Consensus 386 ~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~-~-~~~~~-------------~~~~v~~t~~~G~~V~~ 448 (448)
+++++++|.|||+++|+. +|+|++|++||||++|.+.. . ..+.+ ...+|..||++|++||+
T Consensus 353 ~~~~~~~s~nPA~~~gl~--~G~l~~G~~ADlvl~d~~~~~~v~~~~~~s~~~~sPf~G~~l~G~v~~ti~~G~~v~~ 428 (429)
T PRK09059 353 LRLIEALSTRPAEIFGLP--AGTLKPGAPADIIVIDLDEPWVVDPEDLKSRSKNTPFEEARFQGRVVRTIVAGKTVYE 428 (429)
T ss_pred HHHHHHHhHHHHHHhCCC--cCcccCCCcCCEEEECCCCCEEECcccCccCCCCCCCCCCEEeeEEEEEEECCEEEee
Confidence 999999999999999994 59999999999999998743 2 22221 24689999999999984
No 46
>PRK08417 dihydroorotase; Provisional
Probab=99.91 E-value=1.3e-23 Score=207.99 Aligned_cols=208 Identities=13% Similarity=0.124 Sum_probs=138.8
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecchHHHHH---------------------HHHHHHHhHHhcCCCCCCCeEEecccC
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGDRANDL---------------------VLDMYKSVVVTTGKRDQRFRIEHAQHL 290 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~---------------------~l~a~~~~~~~~~~~~~r~~i~H~~~~ 290 (448)
.+++.+.++++.+++.|.+|.+||+...-+.. ...+++++.......+.+.||.|++..
T Consensus 127 ~~~~~l~~~~~~a~~~g~~V~~HaEd~~~~~~~~~~~g~~~~~~~~~~rp~~aE~~~v~~~~~la~~~~~~lhi~hvS~~ 206 (386)
T PRK08417 127 LDANLLKVIAQYAKMLDVPIFCRCEDSSFDDSGVMNDGELSFELGLPGIPSIAETKEVAKMKELAKFYKNKVLFDTLALP 206 (386)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeCCCHHHhhHHHHhcChhhHHhCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCH
Confidence 46778999999999999999999987543220 112333333333345679999998865
Q ss_pred Ch-hhHHHHHhCC--cEEeeccccccCchhHHHHhcCHhhhhhhhhhHH---------HHHHcCCceeecCCCC-CCCC-
Q 013175 291 AS-GTAARFGDQG--IVASMQPQHLLDDADSARKKLGVDRAERESYLFQ---------SLLANNALLALGSDWP-VADI- 356 (448)
Q Consensus 291 ~~-~~i~~~~~~g--v~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~---------~~~~~Gv~v~~gSD~p-~~~~- 356 (448)
.. +.+..+++.| +++++||+|++++.+.+. .++. +. +.+||+| +.+..|.+.+++||+. .+..
T Consensus 207 ~~~~~i~~ak~~g~~vt~ev~ph~L~l~~~~~~-~~~~-~~-k~~PPlR~~~d~~~L~~~l~~g~Id~i~SDHaP~~~~~ 283 (386)
T PRK08417 207 RSLELLDKFKSEGEKLLKEVSIHHLILDDSACE-NFNT-AA-KLNPPLRSKEDRLALLEALKEGKIDFLTSLHSAKSNSK 283 (386)
T ss_pred HHHHHHHHHHHCCCCEEEEechHHHeeCHHHhc-CcCc-cc-EECCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHH
Confidence 43 3444455555 889999999998776543 2332 23 5667766 3567899999999973 3210
Q ss_pred --CHHH-------HHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC-
Q 013175 357 --NPLC-------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE- 426 (448)
Q Consensus 357 --~p~~-------~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~- 426 (448)
.+|. ++...+.-.. ..+.....++++++++++|.|||+++|+. .|+|++|+.|||+++|.+...
T Consensus 284 K~~~~~~a~~G~~g~e~~~~~~~----~~~v~~~~~~~~~~~~~~t~~pA~~lgl~--~G~l~~G~~ADlvi~d~~~~~~ 357 (386)
T PRK08417 284 KDLAFDEAAFGIDSICEYFSLCY----TYLVKEGIITWSELSRFTSYNPAQFLGLN--SGEIEVGKEADLVLFDPNESTI 357 (386)
T ss_pred ccCCHhHCCCCchHHHHHHHHHH----HHHHhcCCCCHHHHHHHHHHHHHHHhCCC--CCccCCCCcCCEEEEcCCCCeE
Confidence 0221 1211111000 00112446899999999999999999996 399999999999999987422
Q ss_pred -C----h-h-hhccCeeeEEEECCEEecC
Q 013175 427 -D----F-A-AEVSASIEATYVSGVQAYP 448 (448)
Q Consensus 427 -~----~-~-~~~~~~v~~t~~~G~~V~~ 448 (448)
+ + . .....+|..||++|++||.
T Consensus 358 ~~~~~~p~~g~~~~g~v~~tiv~G~~v~~ 386 (386)
T PRK08417 358 IDDNFSLYSGDELYGKIEAVIIKGKLYLE 386 (386)
T ss_pred eCCCCCCccCCEEeccEEEEEECCEEEeC
Confidence 1 1 1 1224579999999999984
No 47
>PRK13309 ureC urease subunit alpha; Reviewed
Probab=99.91 E-value=2e-22 Score=202.54 Aligned_cols=196 Identities=17% Similarity=0.152 Sum_probs=140.6
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecc---hHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCC---hhhHHHHH-hCCcEE
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIG---DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA---SGTAARFG-DQGIVA 305 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~g---d~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~---~~~i~~~~-~~gv~~ 305 (448)
+++.+.++++.|.++|.++++|+.. ...++..+.+ .+ +...++.|..... ..++-+++ ..+|-.
T Consensus 230 t~~~L~~aLe~A~~~gv~VaiH~d~lnE~g~vE~~~aa-------~~--grpih~~H~~Gaggghapd~~~~~~~~~~~~ 300 (572)
T PRK13309 230 TAAALRHALRVADEVDIQVAVHTDSLNECGYVEDTIDA-------FE--GRTIHTFHTEGAGGGHAPDIIKVASQTNVLP 300 (572)
T ss_pred CHHHHHHHHHHHHhcCCEEEEeCCccccchhHHHHHHH-------hC--CCceeeeeccCcccCCchhHHHhcCCCCccc
Confidence 6788999999999999999999742 2222222221 12 3456666765432 23444443 344433
Q ss_pred -eeccc-------------------ccc----CchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCC---CCCCH
Q 013175 306 -SMQPQ-------------------HLL----DDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV---ADINP 358 (448)
Q Consensus 306 -~~~P~-------------------~~~----~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~---~~~~p 358 (448)
++.|+ |+. .+..+...++|.++ .++++.++++|+.+++|||+|+ .+.+|
T Consensus 301 ~st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~D~~~a~srig~e~----~~a~~~l~daGa~~~~gSD~pv~gr~~~~p 376 (572)
T PRK13309 301 SSTNPTLPYGVNSQAELFDMIMVCHNLNPNVPADVAFAESRVRPET----IAAENVLHDMGVISMFSSDSQAMGRVGENW 376 (572)
T ss_pred CCCCCCCCCcccchHhhhchhhhhccCCCCCCCChhHHHHhhCchh----hcchhHHHhCCCEEEEcCCCCcccCCcccH
Confidence 34443 111 12234456777754 4899999999999999999997 47899
Q ss_pred HHHHHHHHcCCCCCCC--CCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCee
Q 013175 359 LCAIRTAMKRIPPGWD--NAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASI 436 (448)
Q Consensus 359 ~~~~~~a~~r~~~~~~--~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v 436 (448)
+..++.|++|+...+. ......+.+++.++|+++|+|||+++|+++++|+|++||.|||||||.+++. .++
T Consensus 377 ~~~iq~Av~rk~~~g~l~~~~~~~~~~~v~~aL~~yT~n~A~a~g~e~~~GsLe~Gk~ADlvvld~d~f~-------~~~ 449 (572)
T PRK13309 377 LRAIQTADAMKAARGKLPEDAAGNDNFRVLRYVAKITINPAITQGVSHVIGSVEVGKMADLVLWEPRFFG-------AKP 449 (572)
T ss_pred HHHHHHHHHHHhccCCCCccCCCcccccHHHHHHHHhHHHHHHcCcccCccccCCCCcCCEEEEchhhcC-------CCc
Confidence 9999999988643211 1112357799999999999999999999999999999999999999988775 246
Q ss_pred eEEEECCEEecC
Q 013175 437 EATYVSGVQAYP 448 (448)
Q Consensus 437 ~~t~~~G~~V~~ 448 (448)
..||++|++||.
T Consensus 450 ~~vi~~G~iv~~ 461 (572)
T PRK13309 450 KMVIKGGMINWA 461 (572)
T ss_pred cEEEECCEEEEe
Confidence 899999999984
No 48
>PRK07583 cytosine deaminase-like protein; Validated
Probab=99.90 E-value=5.5e-22 Score=199.85 Aligned_cols=292 Identities=19% Similarity=0.226 Sum_probs=182.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcch--hhHHHHH
Q 013175 108 EVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETW--SSLADLI 185 (448)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~--~~~~~~~ 185 (448)
.++.+++.+.+..+.+.++.+|+|+|..+-..++... ...++...++.+.. .+.+.+.++..++.... ....++.
T Consensus 114 ~~~~~~~~~r~~~~~~~a~~~Gtt~vRt~vd~~~~~~-~~~~~~i~~~~~~~--~~~~~~~~v~~~p~~~~~~~~~~eL~ 190 (438)
T PRK07583 114 HWSAEDLYRRMEFGLRCAYAHGTSAIRTHLDSFAPQA-AISWEVFAELREAW--AGRIALQAVSLVPLDAYLTDAGERLA 190 (438)
T ss_pred cCCHHHHHHHHHHHHHHHHHhChhhEEeeeccCCCCc-ccHHHHHHHHHHHh--hccCeEEEEEecChhhccCchHHHHH
Confidence 4567888888999999999999997776533211110 11222222222222 33455555443322110 1112222
Q ss_pred HhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecc-hHHHHHH
Q 013175 186 NKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIG-DRANDLV 264 (448)
Q Consensus 186 ~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~g-d~a~~~~ 264 (448)
+.... -+++. ++. +|... -+++.+.++++.|+++|+++.+|+.+ +......
T Consensus 191 ~~v~~-------~~gv~-------g~~------~~~~~--------~~d~~l~~i~~lA~~~G~~v~vH~~E~~~~~~~~ 242 (438)
T PRK07583 191 DLVAE-------AGGLL-------GGV------TYMNP--------DLDAQLDRLFRLARERGLDLDLHVDETGDPASRT 242 (438)
T ss_pred HHHHH-------cCCEE-------eCC------CCCCC--------CHHHHHHHHHHHHHHhCCCcEEeECCCCCchHHH
Confidence 11000 01111 110 22110 14678999999999999999999943 2222223
Q ss_pred HHHHHHhHHhcCCCCCCCeEEecccCC-------hhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHH
Q 013175 265 LDMYKSVVVTTGKRDQRFRIEHAQHLA-------SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQS 337 (448)
Q Consensus 265 l~a~~~~~~~~~~~~~r~~i~H~~~~~-------~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~ 337 (448)
++.+.+.....+. ..+++++||..++ .+.++++++.|+.+++||.+........... ..+. +...|+++
T Consensus 243 l~~~~~~~~~~G~-~~~v~i~H~~~l~~~~~~~~~~~i~~la~~gv~vv~~P~~~~~l~~~~~~~--~p~~-~~~~~v~~ 318 (438)
T PRK07583 243 LKAVAEAALRNGF-EGKVTCGHCCSLAVQPEEQAQATIALVAEAGIAIVSLPMCNLYLQDRQPGR--TPRW-RGVTLVHE 318 (438)
T ss_pred HHHHHHHHHHhCC-CCCEEEEeccchhcCCHHHHHHHHHHHHHcCCeEEECcchhhhhcCCCcCC--CCCC-CCcchHHH
Confidence 4444433334454 3479999998776 3789999999999999998743211000000 1122 45679999
Q ss_pred HHHcCCceeecCCCC------CCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccC
Q 013175 338 LLANNALLALGSDWP------VADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSP 411 (448)
Q Consensus 338 ~~~~Gv~v~~gSD~p------~~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~ 411 (448)
++++|+++++|||+. ....+++..+..++... ...+++.++|+++|.|||+++|+++ +|+|++
T Consensus 319 l~~aGV~valGtD~~~d~~~p~g~~~~~~~~~~a~~~~----------~~~~~~~~al~~~T~~~A~~lg~~~-~G~i~~ 387 (438)
T PRK07583 319 LKAAGIPVAVASDNCRDPFYAYGDHDMLEVFREAVRIL----------HLDHPYDDWPAAVTTTPADIMGLPD-LGRIAV 387 (438)
T ss_pred HHHCCCeEEEEeCCCCCCCCCCCCcCHHHHHHHHHHHH----------hcCCcHHHHHHHHhHHHHHHcCCCC-CCCcCC
Confidence 999999999999973 22356777776655321 1135889999999999999999987 899999
Q ss_pred CCcccEEEecCCCCCChhhhc-cCeeeEEEECCEEec
Q 013175 412 GKIADFVILSTSSWEDFAAEV-SASIEATYVSGVQAY 447 (448)
Q Consensus 412 Gk~ADlvvld~d~~~~~~~~~-~~~v~~t~~~G~~V~ 447 (448)
|+.|||||+|.+++.+. +. ...+..||++|++|+
T Consensus 388 G~~ADlvv~d~~~~~~~--~~~~~~~~~V~~~G~~v~ 422 (438)
T PRK07583 388 GAPADLVLFKARSFSEL--LSRPQSDRIVLRAGKPID 422 (438)
T ss_pred CCCCCEEEEcCCCHHHH--HhcCCCccEEEECCEEec
Confidence 99999999999986521 11 234678999999986
No 49
>PRK09230 cytosine deaminase; Provisional
Probab=99.90 E-value=3.8e-22 Score=199.70 Aligned_cols=298 Identities=13% Similarity=0.121 Sum_probs=182.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcchhhHHHHHH
Q 013175 107 PEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLIN 186 (448)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~~~~~~~~~ 186 (448)
...++++++......+.++++.|+|+|.++.... ......+....++.+++...-.+.+|.+...++.......+..+
T Consensus 93 ~~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~--~~~~~~~~a~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~~~~l~ 170 (426)
T PRK09230 93 ALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVS--DPTLTALKAMLEVKEEVAPWVDLQIVAFPQEGILSYPNGEALLE 170 (426)
T ss_pred hcCCHHHHHHHHHHHHHHHHHcCcccEEeccccC--CcchhHHHHHHHHHHHhhCcceEEEEeccCccccCCccHHHHHH
Confidence 4568899999999999999999999999985421 11111233333333333322333344322111111111112221
Q ss_pred hcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHH-HHHHH
Q 013175 187 KTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRA-NDLVL 265 (448)
Q Consensus 187 ~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a-~~~~l 265 (448)
...+. . ..++. | ..+.+|.. ..+++.++++++.|+++|+++++|+.+... .....
T Consensus 171 ~a~~~-------~-~~~vg-~-------~p~~~~~~--------~~~~e~l~~~~~~A~~~g~~~~~H~~E~~~~~~~~~ 226 (426)
T PRK09230 171 EALRL-------G-ADVVG-A-------IPHFEFTR--------EYGVESLHKAFALAQKYDRLIDVHCDEIDDEQSRFV 226 (426)
T ss_pred HHHHc-------C-CCEEe-C-------CCCccccc--------hhHHHHHHHHHHHHHHhCCCcEEEECCCCCcchHHH
Confidence 11100 0 01111 1 11222321 135788999999999999999999964221 11112
Q ss_pred HHHHHhHHhcCCCCCCCeEEecccC-------ChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHH
Q 013175 266 DMYKSVVVTTGKRDQRFRIEHAQHL-------ASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSL 338 (448)
Q Consensus 266 ~a~~~~~~~~~~~~~r~~i~H~~~~-------~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~ 338 (448)
....+.....+ .+.+..+.||..+ ++++++++++.|+.+++||.+........ .. .+.+ ++..|+++|
T Consensus 227 ~~~~~~~~~~g-l~~~v~~~H~~~l~~~~~~~~~~~~~~La~~gv~vv~cP~sn~~l~~~~-~~-~p~~--~g~~pi~~l 301 (426)
T PRK09230 227 ETVAALAHREG-MGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRF-DT-YPKR--RGITRVKEM 301 (426)
T ss_pred HHHHHHHHHhC-CCCCEEEEecCchhcCCHHHHHHHHHHHHHcCCeEEECcchhhhhcCCC-CC-CCCC--CCCcCHHHH
Confidence 22333334445 4678999999988 47899999999999999999732111000 00 0111 356789999
Q ss_pred HHcCCceeecCCCCCC------CCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCC
Q 013175 339 LANNALLALGSDWPVA------DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPG 412 (448)
Q Consensus 339 ~~~Gv~v~~gSD~p~~------~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~G 412 (448)
+++|++|++|||.+.. ..+++..+..+..... +... -++.++|+|+|.|||+++|+++ .| |++|
T Consensus 302 ~~aGv~V~lGTD~~~d~~~~~~~~d~~~~~~~~~~~~~------~~~~--~~~~~~l~maT~~gA~alg~~~-~g-le~G 371 (426)
T PRK09230 302 LEAGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQ------LMGY--GQINDGLNLITTHSARTLNLQD-YG-IEVG 371 (426)
T ss_pred HHCCCeEEEecCCCCCCCcCCCCCCHHHHHHHHHHHHh------hCCh--hhHHHHHHHHhcchhHHhCCCC-cC-CCCC
Confidence 9999999999997543 2456666655432110 0000 0467999999999999999987 68 9999
Q ss_pred CcccEEEecCCCCCChhhhc--cCeeeEEEECCEEecC
Q 013175 413 KIADFVILSTSSWEDFAAEV--SASIEATYVSGVQAYP 448 (448)
Q Consensus 413 k~ADlvvld~d~~~~~~~~~--~~~v~~t~~~G~~V~~ 448 (448)
|.||||++|.+... ++. ...+..|+++|++||+
T Consensus 372 ~~ADlv~~~~~~~~---~~~~~~~~~~~v~~~G~~v~~ 406 (426)
T PRK09230 372 NPANLIILPAENGF---DAVRRQVPVRYSIRHGKVIAE 406 (426)
T ss_pred CcCCEEEEeCCCHH---HHHhccCCceEEEECCEEEec
Confidence 99999999964322 221 3568999999999974
No 50
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.
Probab=99.90 E-value=2.1e-22 Score=204.17 Aligned_cols=293 Identities=18% Similarity=0.177 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHhcCcceeEeCcc-CCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCc--chhhHHHHHHhcCCc
Q 013175 115 REALLRASNLALSRGVTTVVDFGR-YYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE--TWSSLADLINKTGHV 191 (448)
Q Consensus 115 ~~~~~~~~~~~~~~GvTtv~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~--~~~~~~~~~~~~~~~ 191 (448)
++.+.++.+.++++|||||.||+. +.|..... +.++...+.. .....+.+.++.... ....+.++.+
T Consensus 69 ~e~~~~~s~aal~gGvTtv~d~p~~~~p~~~~~----~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~ei~~l~~----- 138 (447)
T cd01315 69 WEGFETGTKAAAAGGITTIIDMPLNSIPPTTTV----ENLEAKLEAA-QGKLHVDVGFWGGLVPGNLDQLRPLDE----- 138 (447)
T ss_pred cccHHHHHHHHHhCCceEEEeCCCCCCCCcCCH----HHHHHHHHHh-ccCceeeEEEEEeecCCCHHHHHHHHH-----
Confidence 456778889999999999999973 23332211 1111111111 223456665443221 1122222211
Q ss_pred CCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHH--------
Q 013175 192 LSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDL-------- 263 (448)
Q Consensus 192 ~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~-------- 263 (448)
..+.++|+|++.... .+....+.+.+.++++.+++.|+++++|+.....+..
T Consensus 139 ----~G~~giKv~~~~~~~----------------~~~~~~~~~~l~~~~~~a~~~g~~v~vH~e~~~~~~~~~~~~~~~ 198 (447)
T cd01315 139 ----AGVVGFKCFLCPSGV----------------DEFPAVDDEQLEEAMKELAKTGSVLAVHAENPEITEALQEQAKAK 198 (447)
T ss_pred ----cCCcEEEEEecccCC----------------CCcccCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHhHhhc
Confidence 124578888643210 1122357889999999999999999999986532211
Q ss_pred ----------------HHHHHHHhHHhcCCCCCCCeEEecccCCh-hhHHHHHhCC--cEEeeccccccCchhHHHHhcC
Q 013175 264 ----------------VLDMYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARKKLG 324 (448)
Q Consensus 264 ----------------~l~a~~~~~~~~~~~~~r~~i~H~~~~~~-~~i~~~~~~g--v~~~~~P~~~~~~~~~~~~~~g 324 (448)
...++.++.......+.+.++.|++.... +.++.++..| +++++||+|+..+.+.+.. .+
T Consensus 199 g~~~~~~~~~~~p~~~e~~~~~~~~~la~~~g~~ihi~h~s~~~~~~~i~~~~~~g~~i~~e~~~h~l~~~~~~~~~-~~ 277 (447)
T cd01315 199 GKRDYRDYLASRPVFTEVEAIQRILLLAKETGCRLHIVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFTAEDVPD-GG 277 (447)
T ss_pred CCCChHHhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCceEEEeccccEEEcHHHccC-CC
Confidence 12223333332223457899999875322 3444445555 7788999998876554321 22
Q ss_pred Hhhhhhhhhh---------HHHHHHcCCceeecCCCC-CCC-------CCHHH------H----HHHHHcCCCCCCCCCC
Q 013175 325 VDRAERESYL---------FQSLLANNALLALGSDWP-VAD-------INPLC------A----IRTAMKRIPPGWDNAW 377 (448)
Q Consensus 325 ~~r~~~~~~~---------~~~~~~~Gv~v~~gSD~p-~~~-------~~p~~------~----~~~a~~r~~~~~~~~~ 377 (448)
. .. +..|| +.++++.|.+.+++||+. .+. .+.+. + +...++. +
T Consensus 278 ~-~~-~~~Pplr~~~~~~~l~~~l~~g~i~~i~SDh~p~~~~~k~~~~~~~~~~~~g~~g~~~~~~~~~~~--------~ 347 (447)
T cd01315 278 T-EF-KCAPPIRDAANQEQLWEALENGDIDMVVSDHSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTE--------A 347 (447)
T ss_pred C-ce-EECCCCCChHHHHHHHHHHhCCceeEEeCCCCCCCHHHhccCCCChhhCCCCeeEHHHhHHHHHHH--------H
Confidence 1 11 23333 445788999999999963 321 11110 0 1111110 1
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCC-C-Chhhh-------------ccCeeeEEEEC
Q 013175 378 IPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSW-E-DFAAE-------------VSASIEATYVS 442 (448)
Q Consensus 378 ~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~-~-~~~~~-------------~~~~v~~t~~~ 442 (448)
....+++++++++++|.|||+++|+++++|+|++|+.|||||+|.+.. . ..+.+ ...+|..||++
T Consensus 348 ~~~~~~~~~~~~~~~t~~pa~~~g~~~~~G~l~~g~~Ad~~v~d~~~~~~~~~~~~~~~~~~~~~~g~~~~g~v~~ti~~ 427 (447)
T cd01315 348 VNKRGLSLEDIARLMCENPAKLFGLSHQKGRIAVGYDADFVVWDPEEEFTVDAEDLYYKNKISPYVGRTLKGRVHATILR 427 (447)
T ss_pred HHcCCCCHHHHHHHHhHHHHHHhCCCCCCccccCCCCCCEEEEcCCCCEEEcHHHccccCCCCCccCeEEeeeEEEEEEC
Confidence 124569999999999999999999986789999999999999998742 2 22222 13579999999
Q ss_pred CEEecC
Q 013175 443 GVQAYP 448 (448)
Q Consensus 443 G~~V~~ 448 (448)
|++||.
T Consensus 428 G~~v~~ 433 (447)
T cd01315 428 GTVVYQ 433 (447)
T ss_pred CEEEEE
Confidence 999973
No 51
>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids. Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.
Probab=99.90 E-value=3.3e-22 Score=194.38 Aligned_cols=285 Identities=17% Similarity=0.145 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcchhhHHHHHHhcCCcCC
Q 013175 114 RREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLS 193 (448)
Q Consensus 114 ~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~~~~~~~~~~~~~~~~ 193 (448)
.++.+.+++++++++|||||.||+++.|..+.. +.....++.+ +....+++.++........+.++.....
T Consensus 22 ~~e~~~t~t~aA~~GG~Ttv~~mpn~~p~~~~~---~~~~~~~~~a--~~~~~~d~~~~~~~~~~~~~~el~~l~~---- 92 (337)
T cd01302 22 YKEDFESGSRAAAAGGVTTVIDMPNTGPPPIDL---PAIELKIKLA--EESSYVDFSFHAGIGPGDVTDELKKLFD---- 92 (337)
T ss_pred chhHHHHHHHHHHhCCCcEEEECCCCCCCCCcH---HHHHHHHHHh--CcCcEeeEEEEEeccCccCHHHHHHHHH----
Confidence 478899999999999999999999765544322 2222222222 2344677766543322122333322111
Q ss_pred CCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHH
Q 013175 194 DWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVV 273 (448)
Q Consensus 194 ~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~ 273 (448)
..+.++|+|+....+ .....+++.+.++++.+.+.|.++.+|++ + .+.. + .
T Consensus 93 --~Gv~g~K~f~~~~~~-----------------~~~~~~~~~l~~~~~~~~~~g~~v~~H~E--r----~~~l---a-~ 143 (337)
T cd01302 93 --AGINSLKVFMNYYFG-----------------ELFDVDDGTLMRTFLEIASRGGPVMVHAE--R----AAQL---A-E 143 (337)
T ss_pred --cCCcEEEEEEeccCC-----------------CccccCHHHHHHHHHHHHhcCCeEEEeHH--H----HHHH---H-H
Confidence 235679998632100 01135788899999999999999999998 1 1111 1 1
Q ss_pred hcCCCCCCCeEEecccCCh-hhHHHHHhCC--cEEeeccccccCchhHHHHh------cCHhhhhhhhhhHHHHHHcCCc
Q 013175 274 TTGKRDQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARKK------LGVDRAERESYLFQSLLANNAL 344 (448)
Q Consensus 274 ~~~~~~~r~~i~H~~~~~~-~~i~~~~~~g--v~~~~~P~~~~~~~~~~~~~------~g~~r~~~~~~~~~~~~~~Gv~ 344 (448)
. .+.+.+|+|++.... +.+..+++.| +++++||+|++++.+.+... .++-|.+.....+...++.|.+
T Consensus 144 ~---~g~~l~i~Hiss~~~le~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~i 220 (337)
T cd01302 144 E---AGANVHIAHVSSGEALELIKFAKNKGVKVTCEVCPHHLFLDESMLRLNGAWGKVNPPLRSKEDREALWEGVKNGKI 220 (337)
T ss_pred H---hCCcEEEEeCCCHHHHHHHHHHHHCCCcEEEEcChhhheeCHHHhhCCCceEEEeCCCCCHHHHHHHHHHHhCCCC
Confidence 1 246889999885543 4555556555 78899999998776554321 1111211122334457889999
Q ss_pred eeecCCCCCCCC------CHHH-------HHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccC
Q 013175 345 LALGSDWPVADI------NPLC-------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSP 411 (448)
Q Consensus 345 v~~gSD~p~~~~------~p~~-------~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~ 411 (448)
.+++||+..... .+|. ++...+... .....+.+++++++++++|.|||+++|+.+ +|+|++
T Consensus 221 d~i~sDh~p~~~~~k~~~~~~~~a~~G~~g~e~~l~~~-----~~~~~~~~i~~~~~~~~~s~~pA~~~gl~~-~g~i~~ 294 (337)
T cd01302 221 DTIASDHAPHSKEEKESGKDIWKAPPGFPGLETRLPIL-----LTEGVKRGLSLETLVEILSENPARIFGLYP-KGTIAV 294 (337)
T ss_pred CEEecCCCCCCHHHhccCCCcccCCCCcccHHHHHHHH-----HHHHHhcCCCHHHHHHHHHHHHHHHcCCCC-CCcccc
Confidence 999999742110 0111 111110000 000113468999999999999999999976 699999
Q ss_pred CCcccEEEecCCCC-C-ChhhhccCeeeEEEECCEEe
Q 013175 412 GKIADFVILSTSSW-E-DFAAEVSASIEATYVSGVQA 446 (448)
Q Consensus 412 Gk~ADlvvld~d~~-~-~~~~~~~~~v~~t~~~G~~V 446 (448)
|+.|||||+|.+.. + ..+++. .+...|...|+.+
T Consensus 295 G~~ADlvi~d~~~~~~v~~~~~~-s~~~~sp~~G~~l 330 (337)
T cd01302 295 GYDADLVIVDPKKEWKVTAEEIE-SKADWTPFEGMEV 330 (337)
T ss_pred CCcCCEEEEeCCCcEEEcHHHhc-ccCCCCCcCCcEE
Confidence 99999999999853 3 444443 3455566666543
No 52
>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase.
Probab=99.90 E-value=1e-21 Score=196.20 Aligned_cols=301 Identities=18% Similarity=0.143 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcch---hhHHHHHHhcCCc
Q 013175 115 REALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETW---SSLADLINKTGHV 191 (448)
Q Consensus 115 ~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~---~~~~~~~~~~~~~ 191 (448)
.+.+.+..+.++++||||+.+|+.+.|.... . +.++...+.. ++...+++.++...... ..+.+......
T Consensus 56 ~~~~~~~~~~~~~~GvTtv~~~~~t~p~~~~---~-~~l~~~~~~~-~~~~~vd~~~~~~~~~~~~~~~l~e~~~l~~-- 128 (411)
T TIGR00857 56 KEDIESGSKAAAHGGFTTVADMPNTKPPIDT---P-ETLEWKLQRL-KKVSLVDVHLYGGVTQGNQGKELTEAYELKE-- 128 (411)
T ss_pred HhHHHHHHHHHHhCCeEEEEEecCCCCCCCc---H-HHHHHHHHHh-ccCCcccEEEEEEEecCCccccHHHHHHHHH--
Confidence 4678888899999999999999865443221 1 2222222221 23345666554433211 11222221110
Q ss_pred CCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHH--------
Q 013175 192 LSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDL-------- 263 (448)
Q Consensus 192 ~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~-------- 263 (448)
..+.+ |+|.+. +.+..+++.+.++++.+++.|+++.+|++.+.-+..
T Consensus 129 ----~Gv~g-~~f~~~--------------------~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~~~~g~~ 183 (411)
T TIGR00857 129 ----AGAVG-RMFTDD--------------------GSEVQDILSMRRALEYAAIAGVPIALHAEDPDLIYGGVMHEGPS 183 (411)
T ss_pred ----CCcEE-EEEEeC--------------------CcccCCHHHHHHHHHHHHHcCCEEEEecCCHHHHhhhhhcCCcc
Confidence 01223 334321 111246789999999999999999999986543211
Q ss_pred -------------HHHHHHHhHHhcCCCCCCCeEEecccCCh-hhHHHHHhCC--cEEeeccccccCchhHHHHh-----
Q 013175 264 -------------VLDMYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARKK----- 322 (448)
Q Consensus 264 -------------~l~a~~~~~~~~~~~~~r~~i~H~~~~~~-~~i~~~~~~g--v~~~~~P~~~~~~~~~~~~~----- 322 (448)
...++.++.......+.+.+|.|++.... +.+...++.| +++++||+|++++.+.+...
T Consensus 184 ~~~~~~~~~p~~aE~~ai~~~~~la~~~~~~~~i~Hvs~~~~l~~i~~a~~~g~~v~~ev~ph~L~~~~~~~~~~~~~~k 263 (411)
T TIGR00857 184 AAQLGLPARPPEAEEVAVARLLELAKHAGCPVHICHISTKESLELIVKAKSQGIKITAEVTPHHLLLSEEDVARLDGNGK 263 (411)
T ss_pred cHhhCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHHHHcCCcEEEeechhhheecHHHHhCCCccEE
Confidence 11223333222223467899999886433 4445555555 88999999998876654321
Q ss_pred -cCHhhhhhhhhhHHHHHHcCCceeecCCCC-CCCCC---HHHHHHHHHcCCCCCCCC--CCCCCCCCCHHHHHHHHhHH
Q 013175 323 -LGVDRAERESYLFQSLLANNALLALGSDWP-VADIN---PLCAIRTAMKRIPPGWDN--AWIPSERISLTDALIAHTLS 395 (448)
Q Consensus 323 -~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p-~~~~~---p~~~~~~a~~r~~~~~~~--~~~~~~~ls~~~al~~~T~n 395 (448)
.++-|.++...++.+.+..|.+.+++||+. ..... +|.....++......... .......++++++++++|.|
T Consensus 264 ~~Pplr~~~~~~~L~~~l~~g~i~~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~t~~ 343 (411)
T TIGR00857 264 VNPPLREKEDRLALIEGLKDGIIDIIATDHAPHTLEEKTKEFAAAPPGIPGLETALPLLLQLLVKGLISLKDLIRMLSIN 343 (411)
T ss_pred EcCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCChHHccCCHhhCCCCceeHHHHHHHHHHHHHhCCCCHHHHHHHHhHH
Confidence 122222122334556888999999999963 22100 111111000000000000 00113369999999999999
Q ss_pred HHHHcccCCCcccccCCCcccEEEecCCCCC--Chhhhc-------------cCeeeEEEECCEEecC
Q 013175 396 AARACFLENDVGSLSPGKIADFVILSTSSWE--DFAAEV-------------SASIEATYVSGVQAYP 448 (448)
Q Consensus 396 ~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~--~~~~~~-------------~~~v~~t~~~G~~V~~ 448 (448)
||+++|+++ +|+|++|+.|||+|+|.+... +.+++. ..+|..|+++|++||.
T Consensus 344 pa~~~g~~~-~G~l~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~sp~~g~~~~g~v~~tiv~G~~v~~ 410 (411)
T TIGR00857 344 PARIFGLPD-KGTLEEGNPADITVFDLKKEWTINAETFYSKAKNTPFEGMSLKGKPIATILRGKVVYE 410 (411)
T ss_pred HHHHhCCCC-CCccCCCCcCCEEEEcCCCCEEEchHHCccCCCCCCcCCCEEEeEEEEEEECCEEEec
Confidence 999999975 499999999999999987542 223221 2379999999999984
No 53
>PLN02795 allantoinase
Probab=99.89 E-value=2.7e-22 Score=204.26 Aligned_cols=298 Identities=16% Similarity=0.138 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHHhcCcceeEeCcc-CCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcc-h-hhHHHHHHhcCCc
Q 013175 115 REALLRASNLALSRGVTTVVDFGR-YYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLET-W-SSLADLINKTGHV 191 (448)
Q Consensus 115 ~~~~~~~~~~~~~~GvTtv~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~-~-~~~~~~~~~~~~~ 191 (448)
.+.+..+++.++.+||||+.||++ +.|.... .+.++...+. ..+...+.+.++..... . ....++.+...
T Consensus 116 ~e~~~~~~~aa~~gGvTtv~dmp~~~~P~~~~----~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~~l~~~~~-- 188 (505)
T PLN02795 116 WEGFPTGTKAAAAGGITTLVDMPLNSFPSTTS----VETLELKIEA-AKGKLYVDVGFWGGLVPENAHNASVLEELLD-- 188 (505)
T ss_pred hhHHHHHHHHHHcCCcEEEECCCCCCCCCCCh----HHHHHHHHHH-hccCceeeeeceecccCcchhHHHHHHHHHH--
Confidence 467889999999999999999983 3343321 1222222221 12344556544432211 1 11222211100
Q ss_pred CCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHH--------
Q 013175 192 LSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDL-------- 263 (448)
Q Consensus 192 ~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~-------- 263 (448)
..+.++|+|+... .+ .+.+..+++.+.++++.+.++|.++++|++...-+..
T Consensus 189 ----~G~~g~k~f~~~~---------~~-------~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~~~~~~~ 248 (505)
T PLN02795 189 ----AGALGLKSFMCPS---------GI-------NDFPMTTATHIKAALPVLAKYGRPLLVHAEVVSPVESDSRLDADP 248 (505)
T ss_pred ----CCCcEEEEEeccc---------CC-------CCcccCCHHHHHHHHHHHHHhCCEEEEecCChhHhhhhhhhhcCC
Confidence 1244578875211 00 1222457889999999999999999999987542210
Q ss_pred --------------HHHHHHHhHHhcCCC-------CCCCeEEecccC-C-hhhHHHHHhCC--cEEeeccccccCchhH
Q 013175 264 --------------VLDMYKSVVVTTGKR-------DQRFRIEHAQHL-A-SGTAARFGDQG--IVASMQPQHLLDDADS 318 (448)
Q Consensus 264 --------------~l~a~~~~~~~~~~~-------~~r~~i~H~~~~-~-~~~i~~~~~~g--v~~~~~P~~~~~~~~~ 318 (448)
...+++++....... +.+.+|.|++.. . -+.+.++++.| |++++||+|++++.+.
T Consensus 249 ~~~~~~~~~rP~~aE~~ai~~~~~la~~~~~~~~~~g~~lhi~HiSt~~~~~e~i~~ak~~G~~Vt~Ev~ph~L~l~~~~ 328 (505)
T PLN02795 249 RSYSTYLKSRPPSWEQEAIRQLLEVAKDTRPGGVAEGAHVHIVHLSDAESSLELIKEAKAKGDSVTVETCPHYLAFSAEE 328 (505)
T ss_pred cChhHhcccCCHHHHHHHHHHHHHHHHHhhhcccCCCCCEEEEECCChHHHHHHHHHHHHCCCcEEEEeChhhhcccHHH
Confidence 111222222221112 679999999875 3 25556666667 8999999999887665
Q ss_pred HHHhcCHhhhhhhhhhHH---------HHHHcCCceeecCCCC-CCC---C---CHHHH-------HHHHHcCCCCCCCC
Q 013175 319 ARKKLGVDRAERESYLFQ---------SLLANNALLALGSDWP-VAD---I---NPLCA-------IRTAMKRIPPGWDN 375 (448)
Q Consensus 319 ~~~~~g~~r~~~~~~~~~---------~~~~~Gv~v~~gSD~p-~~~---~---~p~~~-------~~~a~~r~~~~~~~ 375 (448)
+.. .+. .+ +.+||+| +.+..|.+.+++||+. .+. . ..|.. +...+... .
T Consensus 329 ~~~-~~~-~~-k~~PPLR~~~d~~aL~~al~~G~Id~i~sDHap~~~~~K~~~~~~~~~a~~G~~gle~~l~~~-----~ 400 (505)
T PLN02795 329 IPD-GDT-RY-KCAPPIRDAANRELLWKALLDGDIDMLSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVLPAT-----W 400 (505)
T ss_pred ccC-CCC-ce-EEcCCCCChHHHHHHHHHHhCCCceEEecCCCCCChHHhccCcCCHhhCCCCceeHHHHHHHH-----H
Confidence 422 221 22 4555555 4678899999999974 211 0 11211 11111100 0
Q ss_pred CCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCC-C-Chhh---------------hccCeeeE
Q 013175 376 AWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSW-E-DFAA---------------EVSASIEA 438 (448)
Q Consensus 376 ~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~-~-~~~~---------------~~~~~v~~ 438 (448)
....+.+++++++++++|.|||+++|++ .+|+|++|+.|||||+|.+.. + +.+. ....+|..
T Consensus 401 ~~~~~~~l~l~~~v~~~s~~pA~~~gl~-~~G~l~~G~~ADlvi~d~~~~~~v~~~~~~~s~~~~~sp~~G~~l~g~v~~ 479 (505)
T PLN02795 401 TAGRAYGLTLEQLARWWSERPAKLAGLD-SKGAIAPGKDADIVVWDPEAEFVLDESYPIYHKHKSLSPYLGTKLSGKVIA 479 (505)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHhCCC-CCCccCCCCccCEEEEcCCcceEECcchhhhhcCCCcCCCCCeEEEeEEEE
Confidence 0012445899999999999999999994 479999999999999998642 2 1110 11357999
Q ss_pred EEECCEEecC
Q 013175 439 TYVSGVQAYP 448 (448)
Q Consensus 439 t~~~G~~V~~ 448 (448)
||++|++||.
T Consensus 480 tiv~G~~v~~ 489 (505)
T PLN02795 480 TFVRGNLVFL 489 (505)
T ss_pred EEECCEEEEE
Confidence 9999999973
No 54
>PRK05985 cytosine deaminase; Provisional
Probab=99.89 E-value=1.2e-21 Score=194.89 Aligned_cols=282 Identities=20% Similarity=0.149 Sum_probs=179.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcchh--hHHHHH
Q 013175 108 EVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWS--SLADLI 185 (448)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~~--~~~~~~ 185 (448)
..+.+++........+++++.|+|+|+|+....|.. ....+....++.+.. ++.+.+.++.+.+..... ...++.
T Consensus 90 ~~~~~~~~~~a~~~~~~~l~~G~t~vr~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~g~~~~~~~~~ll 166 (391)
T PRK05985 90 AASGHPAAERALALARAAAAAGTTAMRSHVDVDPDA-GLRHLEAVLAARETL--RGLIDIQIVAFPQSGVLSRPGTAELL 166 (391)
T ss_pred ccchhHHHHHHHHHHHHHHhcCcceEEeeEccCCCc-ccchHHHHHHHHHHh--hCcccEEEEeccCccccCCcCHHHHH
Confidence 346677888889999999999999999986433321 122344444443222 345667766553321111 111222
Q ss_pred HhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEec--chHHHHH
Q 013175 186 NKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAI--GDRANDL 263 (448)
Q Consensus 186 ~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~--gd~a~~~ 263 (448)
+.. ++.+ .| ..++. .|+ .....+++.|.++++.|+++|+++++|+. ++.....
T Consensus 167 ~~~-------l~~g-----~~-~~gg~-----~p~-------~~~~~~~~~l~~~~~~A~~~g~~i~~Hv~e~~d~~~~~ 221 (391)
T PRK05985 167 DAA-------LRAG-----AD-VVGGL-----DPA-------GIDGDPEGQLDIVFGLAERHGVGIDIHLHEPGELGAFQ 221 (391)
T ss_pred HHH-------HHcC-----CC-EEeCC-----CCC-------CcCCCHHHHHHHHHHHHHHhCCCcEEeeCCCCCccHHH
Confidence 211 0000 11 01110 121 11134678999999999999999988864 4444444
Q ss_pred HHHHHHHhHHhcCCCCCCCeEEecccCC---h----hhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHH
Q 013175 264 VLDMYKSVVVTTGKRDQRFRIEHAQHLA---S----GTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQ 336 (448)
Q Consensus 264 ~l~a~~~~~~~~~~~~~r~~i~H~~~~~---~----~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~ 336 (448)
....++.+.. .+.. .+..++|+.... + +.++++++.|+.+++|+.. + ...+|++
T Consensus 222 ~~~~~e~~~~-~g~~-~~~~i~H~~~l~~~~~~~~~~~i~~lae~g~~v~~~~~~------------~-----~~~~~~~ 282 (391)
T PRK05985 222 LERIAARTRA-LGMQ-GRVAVSHAFCLGDLPEREVDRLAERLAEAGVAIMTNAPG------------S-----VPVPPVA 282 (391)
T ss_pred HHHHHHHHHH-hCCC-CCEehhhhhhhhcCCHHHHHHHHHHHHHcCCeEEEeCCC------------C-----CCCCCHH
Confidence 4455555433 3432 378999998653 2 5579999999999888532 1 3467999
Q ss_pred HHHHcCCceeecCCCCCC------CCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCccccc
Q 013175 337 SLLANNALLALGSDWPVA------DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLS 410 (448)
Q Consensus 337 ~~~~~Gv~v~~gSD~p~~------~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~ 410 (448)
+++++|+++++|||++.+ +.+++..+..+..... +.+. -++.++|+++|.|||+++|+++ ++|+
T Consensus 283 ~l~~~Gv~v~lGtD~~~~~~~p~~~~~~~~~~~~~~~~~~------~~~~--~~~~~al~~~T~~~A~~lg~~~--~~l~ 352 (391)
T PRK05985 283 ALRAAGVTVFGGNDGIRDTWWPYGNGDMLERAMLIGYRSG------FRTD--DELAAALDCVTHGGARALGLED--YGLA 352 (391)
T ss_pred HHHHCCCeEEEecCCCCCCCcCCCCCcHHHHHHHHHHHHc------cCCh--HHHHHHHHHHcchhHHHhCCcc--cCCC
Confidence 999999999999997543 3566666554432211 1112 1468999999999999999986 4699
Q ss_pred CCCcccEEEecCCCCCChhhhc-cCeeeEEEECCEEecC
Q 013175 411 PGKIADFVILSTSSWEDFAAEV-SASIEATYVSGVQAYP 448 (448)
Q Consensus 411 ~Gk~ADlvvld~d~~~~~~~~~-~~~v~~t~~~G~~V~~ 448 (448)
+||.||||++|.+++. +.+. ...+..|+++|++||.
T Consensus 353 ~G~~ADlvvld~~~~~--~~~~~~~~~~~v~~~G~~v~~ 389 (391)
T PRK05985 353 VGARADFVLVDAETVA--EAVVAVPVRRLVVRGGRIVAR 389 (391)
T ss_pred CCCcCCEEEECCCCHH--HHHhhCCcceEEEECCEEEec
Confidence 9999999999998654 2222 3346779999999984
No 55
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=99.89 E-value=8.7e-22 Score=193.62 Aligned_cols=280 Identities=19% Similarity=0.144 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHHHhcCcceeEeCccCC---CCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCc--chhhHHHHHHhc
Q 013175 114 RREALLRASNLALSRGVTTVVDFGRYY---PGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE--TWSSLADLINKT 188 (448)
Q Consensus 114 ~~~~~~~~~~~~~~~GvTtv~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~--~~~~~~~~~~~~ 188 (448)
..+++....++++++||||+.||.... |+....+.+...+..+..+..++.+.+++.++..++ ....+.++....
T Consensus 72 ~~~~~~~~~~~~aa~GiTT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~h~~~e~~~~~~~~~l~~~~ 151 (376)
T TIGR02318 72 IDAAIVEHDKQLAAAGITTVFDALALGDTESGGRRPDNLRRMIDAISEARDRGLLRADHRLHLRCELPNEEVLPELEELI 151 (376)
T ss_pred hHHHHHHHHHHHhhCCcceEEeeEEecccCCcCccHHHHHHHHHHHHHhhhcCchhhhceeEEEEEecCccHHHHHHHHh
Confidence 347899999999999999999996322 332333333333333343333333666776665543 233333333221
Q ss_pred CCcCCCCeeeCceEEEecCCcCCCCc--------cccCCcCCCC-----------CCCcccCCCHHHHHHHHHHHHHCCC
Q 013175 189 GHVLSDWVYLGGVKAFADGSLGSNSA--------LFHEPYADEP-----------HNYGLQVMELESLLSMTMASDKSGL 249 (448)
Q Consensus 189 ~~~~~~~~~~~g~K~f~DG~~~~~ta--------~~~~py~~~~-----------~~~g~~~~~~~~l~~~~~~a~~~g~ 249 (448)
. ..+.++|.|+|++.+.+.. ++...+.... ...+ .++.+.++++++.|++.|+
T Consensus 152 ~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~~--~~~~e~i~~~v~~A~~~G~ 223 (376)
T TIGR02318 152 D------DPRVDLISLMDHTPGQRQFRDLEKYREYYRGKRGLSDDEFDEIVEERIARRA--EYGLANRSEIAALARARGI 223 (376)
T ss_pred c------CCCcCEEEEeCCCCCcccccCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHCCC
Confidence 1 2346789999998753311 1111110000 0011 2357889999999999999
Q ss_pred cEEEEec-chHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhh
Q 013175 250 QVAIHAI-GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRA 328 (448)
Q Consensus 250 ~v~iHa~-gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~ 328 (448)
+++.|+. +...+ +++... | -..++|. ++.+..+.+++.|+.+..|...... +...
T Consensus 224 ~v~sH~~~~~e~i-------~~a~~~-G----v~~~E~~--~t~e~a~~~~~~G~~v~~~~p~~~r---------~~~~- 279 (376)
T TIGR02318 224 PLASHDDDTPEHV-------AEAHDL-G----VTISEFP--TTLEAAKEARSLGMQILMGAPNIVR---------GGSH- 279 (376)
T ss_pred eEEEecCCCHHHH-------HHHHHC-C----CChhccC--CCHHHHHHHHHcCCeEEECCccccc---------cccc-
Confidence 9999994 43322 222221 3 2345663 6788899999999997766321110 0000
Q ss_pred hhhhhhHHHHHHcCCceeecCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCccc
Q 013175 329 ERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGS 408 (448)
Q Consensus 329 ~~~~~~~~~~~~~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gs 408 (448)
....++.+++++|++++++||+. +.+++..+..... ...++++.++++++|.|||+++|+++ +|+
T Consensus 280 -~~~~~l~~~~~~G~~~~l~SD~~--p~~~l~~~~~~~~-----------~~~gl~~~~al~~~T~npA~~lgl~~-~G~ 344 (376)
T TIGR02318 280 -SGNLSARELAHEGLLDVLASDYV--PASLLLAAFQLAD-----------DVEGIPLPQAVKMVTKNPARAVGLSD-RGS 344 (376)
T ss_pred -cchHHHHHHHHCCCcEEEEcCCC--cHHHHHHHHHHHH-----------hhcCCCHHHHHHHHhHHHHHHcCCCC-CCc
Confidence 12457889999999999999983 3344443332221 12358999999999999999999974 799
Q ss_pred ccCCCcccEEEecCCCCCChhhhccCeeeEEEECCEEec
Q 013175 409 LSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 447 (448)
Q Consensus 409 i~~Gk~ADlvvld~d~~~~~~~~~~~~v~~t~~~G~~V~ 447 (448)
|++|+.|||+++|.+.. ...|..||++|++||
T Consensus 345 I~~G~~ADlvvvd~~~~-------~~~v~~v~~~G~~v~ 376 (376)
T TIGR02318 345 IAPGKRADLVRVHRVDG-------VPRIRAVWRAGRRVY 376 (376)
T ss_pred CCCCCcccEEEEcCCCC-------CccceEEEECCEEeC
Confidence 99999999999998421 136889999999997
No 56
>PRK14085 imidazolonepropionase; Provisional
Probab=99.89 E-value=9.8e-22 Score=194.82 Aligned_cols=250 Identities=20% Similarity=0.216 Sum_probs=161.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcC-CCe-eEEEEccCC--cchhhHH
Q 013175 107 PEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSE-KMK-IRVCLFFPL--ETWSSLA 182 (448)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~-irv~~~~~~--~~~~~~~ 182 (448)
..+++++++......++++++.|+|||.|++... .. .....+..+...... ... .+....... .......
T Consensus 104 ~~~t~e~~~~~a~~~~~~~l~~G~Ttv~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 177 (382)
T PRK14085 104 RAASDEELRANVRRLVAEALRQGTTTVETKTGYG--LT----VEDEARSARIAAEFTDEVTFLGAHVVPPEYAGDADEYV 177 (382)
T ss_pred HhCCHHHHHHHHHHHHHHHHhCCceEEEcCCcCC--CC----HHHHHHHHHHHHHhhhcceeeccccCCcccCCCHHHHH
Confidence 4568899999999999999999999999986321 11 111122222111000 011 111111110 0111111
Q ss_pred HHH-----HhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecc
Q 013175 183 DLI-----NKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIG 257 (448)
Q Consensus 183 ~~~-----~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~g 257 (448)
+.. ..... ....+|++.++. .++.++++++++.|+++|+++.+|+.+
T Consensus 178 ~~~~~~~~~~~~~------~~~~idi~~~~~----------------------~~~~~~l~~~~~~a~~~g~~v~~H~~~ 229 (382)
T PRK14085 178 DLVCGPMLDAVAP------HARWIDVFCERG----------------------AFDEDQSRRVLTAGRAAGLGLRVHGNQ 229 (382)
T ss_pred HHHHHHHHHHHHH------hCCeEEEEecCC----------------------CCCHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 110 00000 022356666552 357889999999999999999999986
Q ss_pred hH---HHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhh
Q 013175 258 DR---ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYL 334 (448)
Q Consensus 258 d~---a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~ 334 (448)
.. +++.+++ .| ...++|+.++++++++++++.|+.+++||.+... .+ ...+|
T Consensus 230 ~~~~~~v~~~~~--------~g----~~~i~H~~~l~~~~~~~la~~gv~~~~~P~~~~~--------~~-----~~~~~ 284 (382)
T PRK14085 230 LGPGPGVRLAVE--------LG----AASVDHCTYLTDADVDALAGSGTVATLLPGAEFS--------TR-----QPYPD 284 (382)
T ss_pred ccCChHHHHHHH--------cC----CCcHHHhCCCCHHHHHHHHHcCCEEEECcHHHHh--------cC-----CCCch
Confidence 32 2332221 23 4579999999999999999999999999986321 11 23579
Q ss_pred HHHHHHcCCceeecCCCCC-CCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCC
Q 013175 335 FQSLLANNALLALGSDWPV-ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGK 413 (448)
Q Consensus 335 ~~~~~~~Gv~v~~gSD~p~-~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk 413 (448)
+++++++|+++++|||++. .+.+ ..+...+... ....+++++++|+++|.|||+++|+++ +|+|++||
T Consensus 285 ~~~l~~aGv~v~lgsD~~~~~~~~--~~~~~~~~~~--------~~~~~l~~~~al~~aT~~~A~~lg~~~-~G~l~~G~ 353 (382)
T PRK14085 285 ARRLLDAGVTVALASDCNPGSSYT--SSMPFCVALA--------VRQMGMTPAEAVWAATAGGARALRRDD-VGVLAVGA 353 (382)
T ss_pred HHHHHHCCCcEEEEeCCCCCCChH--HHHHHHHHHH--------HHhcCCCHHHHHHHHHHHHHHHcCCCC-CCCcCCCC
Confidence 9999999999999999852 2222 1222211110 023468999999999999999999985 89999999
Q ss_pred cccEEEecCCCCC
Q 013175 414 IADFVILSTSSWE 426 (448)
Q Consensus 414 ~ADlvvld~d~~~ 426 (448)
.|||||+|.+...
T Consensus 354 ~ADlvv~d~~~~~ 366 (382)
T PRK14085 354 RADLHVLDAPSHL 366 (382)
T ss_pred CCCEEEEcCCCCc
Confidence 9999999987643
No 57
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.89 E-value=2e-22 Score=198.06 Aligned_cols=184 Identities=26% Similarity=0.295 Sum_probs=143.4
Q ss_pred cccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHh--CCcE-
Q 013175 228 GLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGD--QGIV- 304 (448)
Q Consensus 228 g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~--~gv~- 304 (448)
....++++++++++..|.+.|+++.+|+.+...+..+++. + ...++|+.+++.+.+..|++ .|+.
T Consensus 213 ~~~~fs~~e~~~~l~~a~~~g~~v~~HA~~~~g~~~A~~~--------g----~~s~~H~~~ld~~~~~~~a~~~~g~~~ 280 (406)
T COG1228 213 EGGQFSPEEIRAVLAAALKAGIPVKAHAHGADGIKLAIRL--------G----AKSAEHGTLLDHETAALLAEKGAGTPV 280 (406)
T ss_pred cccccCHHHHHHHHHHHHHCCCceEEEecccchHHHHHHh--------C----cceehhhhhcCHhHHHHHhhccCCCcc
Confidence 3446889999999999999999999999987654433332 2 46899999999999999999 7763
Q ss_pred EeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCCC--CCHHHHHHHHHcCCCCCCCCCCCCCCC
Q 013175 305 ASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD--INPLCAIRTAMKRIPPGWDNAWIPSER 382 (448)
Q Consensus 305 ~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~--~~p~~~~~~a~~r~~~~~~~~~~~~~~ 382 (448)
.+..|...+ .+.. ....+++.++++|++++++||++..+ .+....|..++. .+
T Consensus 281 ~~l~p~~~~--------~l~e----~~~~~~~~l~~~GV~vai~TD~~~~~~~~~l~~~m~l~~~-------------~g 335 (406)
T COG1228 281 PVLLPRTKF--------ELRE----LDYKPARKLIDAGVKVAIGTDHNPGTSHGSLALEMALAVR-------------LG 335 (406)
T ss_pred ccccchhhh--------hhhc----ccchhHHHHHHCCCEEEEEcCCCCCchhhHHHHHHHHHHH-------------cC
Confidence 344443321 1222 33467899999999999999998665 334445555543 23
Q ss_pred CCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCCh-hhhccCeeeEEEECCEEecC
Q 013175 383 ISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDF-AAEVSASIEATYVSGVQAYP 448 (448)
Q Consensus 383 ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~-~~~~~~~v~~t~~~G~~V~~ 448 (448)
+|++|||+++|.|||+++|+++++|||++||+|||||||.||+.+. ....-.+|..||++|+++|+
T Consensus 336 mtp~EaL~a~T~naA~alG~~~~~Gsle~Gk~ADlvv~~~dp~~~i~y~~~~~~v~~v~k~G~~~~~ 402 (406)
T COG1228 336 MTPEEALKAATINAAKALGLADKVGSLEPGKDADLVVWDGDPLADIPYFLGLNKVEAVIKDGKVVYE 402 (406)
T ss_pred CCHHHHHHHHHHHHHHHcCCccccccccCCCccCEEEEcCCChhhccccccCCceEEEEECCEEeec
Confidence 8999999999999999999999999999999999999999997732 22234579999999999984
No 58
>PRK02382 dihydroorotase; Provisional
Probab=99.89 E-value=3e-21 Score=194.81 Aligned_cols=284 Identities=19% Similarity=0.192 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCc-chhhHHHHHHhcCCcCC
Q 013175 115 REALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE-TWSSLADLINKTGHVLS 193 (448)
Q Consensus 115 ~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~-~~~~~~~~~~~~~~~~~ 193 (448)
.+.+.+..+.++++||||+.+|+++.|..... +.+...... ......+.+.++.... ....+.++...
T Consensus 71 ~e~~~~~~~aa~~gGvTtv~~~~~t~p~~~~~----~~~~~~~~~-a~~~s~v~~~~~~~~~~~~~~l~~l~~~------ 139 (443)
T PRK02382 71 KETWYTGSRSAAAGGVTTVVDQPNTDPPTVDG----ESFDEKAEL-AARKSIVDFGINGGVTGNWDPLESLWER------ 139 (443)
T ss_pred hhhHHHHHHHHHhCCcEEEEECCCCCCCCChH----HHHHHHHHH-hCcCceEEEEEEeeeccchhhHHHHHhc------
Confidence 46778889999999999999998654433221 112221121 1223345554432211 12222233211
Q ss_pred CCeeeCce-EEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHH-------
Q 013175 194 DWVYLGGV-KAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVL------- 265 (448)
Q Consensus 194 ~~~~~~g~-K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l------- 265 (448)
.+.++ |+|..... +....+++.+.++++.+++.|+++.+|++...-.+...
T Consensus 140 ---gv~~~gkv~~~~~~------------------~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~g~~ 198 (443)
T PRK02382 140 ---GVFALGEIFMADST------------------GGMGIDEELFEEALAEAARLGVLATVHAEDEDLFDELAKLLKGDA 198 (443)
T ss_pred ---CccceeEEEEEecC------------------CCcccCHHHHHHHHHHHHhcCCeEEEecCCHHHHHHhhHhhcCCC
Confidence 12233 66642110 11134678899999999999999999998653221110
Q ss_pred ---------------HHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhh
Q 013175 266 ---------------DMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 330 (448)
Q Consensus 266 ---------------~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~ 330 (448)
.++.++.......+.+.++.|++ +.+.++.+++..+++++||+|++++.+.+.. ++. +. +
T Consensus 199 ~~~~~~~~~p~~~E~~av~~~~~la~~~g~~~hi~h~s--s~~~~~~i~~~~vt~ev~ph~L~l~~~~~~~-~~~-~~-k 273 (443)
T PRK02382 199 DADAWSAYRPAAAEAAAVERALEVASETGARIHIAHIS--TPEGVDAARREGITCEVTPHHLFLSRRDWER-LGT-FG-K 273 (443)
T ss_pred CHhhCCCcCCHHHHHHHHHHHHHHHHHhCCCEEEEECC--CHHHHHHHHHCCcEEEEchhhhhcCHHHHhc-cCc-eE-E
Confidence 11112222122245789999977 4555666666669999999999887665432 221 12 3
Q ss_pred hhhhHHH---------HHHcCCceeecCCCC-CCCC---CH--------------HHHHHHHHcCCCCCCCCCCCCCCCC
Q 013175 331 ESYLFQS---------LLANNALLALGSDWP-VADI---NP--------------LCAIRTAMKRIPPGWDNAWIPSERI 383 (448)
Q Consensus 331 ~~~~~~~---------~~~~Gv~v~~gSD~p-~~~~---~p--------------~~~~~~a~~r~~~~~~~~~~~~~~l 383 (448)
.+||+|+ .++.|.+.+++||+. .+.. .+ +..+..++ .+.++
T Consensus 274 ~~PPlr~~~d~~aL~~~l~~g~i~~i~sDh~P~~~~~K~~~~~~~~~G~~g~e~~~~~~~~~~------------~~~~~ 341 (443)
T PRK02382 274 MNPPLRSEKRREALWERLNDGTIDVVASDHAPHTREEKDADIWDAPSGVPGVETMLPLLLAAV------------RKNRL 341 (443)
T ss_pred EcCCCCChHHHHHHHHHHhCCCCCEEEcCCCCCCHHHhcCChhhCCCCcccHHHHHHHHHHHH------------HcCCC
Confidence 4556554 467899999999973 2210 01 11111111 24579
Q ss_pred CHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC--Chhhhc------------cCeeeEEEECCEEecC
Q 013175 384 SLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--DFAAEV------------SASIEATYVSGVQAYP 448 (448)
Q Consensus 384 s~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~--~~~~~~------------~~~v~~t~~~G~~V~~ 448 (448)
+++++++++|.|||+++|++ .+|+|++|+.|||+|+|.+... ..+.+. ...|..||++|++||.
T Consensus 342 ~l~~~~~~~t~~pA~~~g~~-~~G~l~~G~~AD~vi~d~~~~~~~~~~~~~s~~~~sp~~g~~~~~v~~tiv~G~~v~~ 419 (443)
T PRK02382 342 PLERVRDVTAANPARIFGLD-GKGRIAEGYDADLVLVDPDAAREIRGDDLHSKAGWTPFEGMEGVFPELTMVRGTVVWD 419 (443)
T ss_pred CHHHHHHHHhHHHHHHcCCC-CCCccCCCCcCCEEEEcCCCcEEEcHHHhcccCCCCCcCCCEeceEEEEEECCEEEEE
Confidence 99999999999999999996 4799999999999999986432 222221 1367899999999973
No 59
>PRK07575 dihydroorotase; Provisional
Probab=99.89 E-value=3.2e-21 Score=194.04 Aligned_cols=290 Identities=20% Similarity=0.218 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcchhhHHHHHHhcCCcCC
Q 013175 114 RREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLS 193 (448)
Q Consensus 114 ~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~~~~~~~~~~~~~~~~ 193 (448)
.++.+..+++.++++||||+.||+++.|..+.. +...+..+. ......+++.++..... ..+.++...
T Consensus 72 ~~e~~~~~~~aa~~gGvTt~~dmp~~~p~~~~~---~~~~~~~~~--a~~~~~v~~~~~~~~~~-~~l~~l~~~------ 139 (438)
T PRK07575 72 HKEDLFTASRACAKGGVTSFLEMPNTKPLTTTQ---AALDDKLAR--AAEKCVVNYGFFIGATP-DNLPELLTA------ 139 (438)
T ss_pred CcchHHHHHHHHHhCCEEEEEECCCCCCCCCcH---HHHHHHHHH--hccCcEEEEEEEccccc-cCHHHHHHh------
Confidence 356788888899999999999998655543322 122222222 23456788877644322 223333211
Q ss_pred CCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHH-----------
Q 013175 194 DWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRAND----------- 262 (448)
Q Consensus 194 ~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~----------- 262 (448)
....|+|.|.....+ +....+...+++++ .+.+.++.+|++...-+.
T Consensus 140 --~~~~g~~~f~~~~~~-----------------~~~~~~~~~~~~~~---~~~~~~v~~h~e~~~l~~~~~~~~~g~~~ 197 (438)
T PRK07575 140 --NPTCGIKIFMGSSHG-----------------PLLVDEEAALERIF---AEGTRLIAVHAEDQARIRARRAEFAGISD 197 (438)
T ss_pred --hCCeEEEEEEeeCCC-----------------CcccCcHHHHHHHH---HhCCCEEEEeCcChHHHHhhhHhhccCcC
Confidence 123578888521100 00011233444443 356899999997654211
Q ss_pred -----------HHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHh---CCcEEeeccccccCchhHHHHh------
Q 013175 263 -----------LVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGD---QGIVASMQPQHLLDDADSARKK------ 322 (448)
Q Consensus 263 -----------~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~---~gv~~~~~P~~~~~~~~~~~~~------ 322 (448)
....++.++.......+.+.||.|++ +.+.++.+++ ..+++++||+|++++.+.+...
T Consensus 198 ~~~~~~~~p~~aE~~av~~~~~la~~~g~~lhi~HiS--t~~~v~~i~~~k~~~vt~ev~phhL~l~~~~~~~~~~~~k~ 275 (438)
T PRK07575 198 PADHSQIQDEEAALLATRLALKLSKKYQRRLHILHLS--TAIEAELLRQDKPSWVTAEVTPQHLLLNTDAYERIGTLAQM 275 (438)
T ss_pred cccccccCcHHHHHHHHHHHHHHHHHHCCCEEEEECC--CHHHHHHHHHhcCCCEEEEEchhhheeCHHHHhCCCceEEE
Confidence 01123333333223346799999998 4444444432 3489999999998877654321
Q ss_pred cCHhhhhhhhhhHHHHHHcCCceeecCCCCCCC------------CC-HHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHH
Q 013175 323 LGVDRAERESYLFQSLLANNALLALGSDWPVAD------------IN-PLCAIRTAMKRIPPGWDNAWIPSERISLTDAL 389 (448)
Q Consensus 323 ~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~------------~~-p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al 389 (448)
.++-|.++...++.+++++|++++++||+.... .. |..++...+.-. .....++|+++++
T Consensus 276 ~PPLR~~~d~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~l~~l~~-------~~~~~~lsl~~~~ 348 (438)
T PRK07575 276 NPPLRSPEDNEALWQALRDGVIDFIATDHAPHTLEEKAQPYPNSPSGMPGVETSLPLMLT-------AAMRGKCTVAQVV 348 (438)
T ss_pred eCCCCCHHHHHHHHHHHhCCCCCEEecCCCCCCHHHccCCcccCCCCcccHHHHHHHHHH-------HHhcCCCCHHHHH
Confidence 122232233445667889999999999974221 11 111111111000 0123469999999
Q ss_pred HHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC--Chhhh-------------ccCeeeEEEECCEEec
Q 013175 390 IAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--DFAAE-------------VSASIEATYVSGVQAY 447 (448)
Q Consensus 390 ~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~--~~~~~-------------~~~~v~~t~~~G~~V~ 447 (448)
+++|.|||+++|+++ +|+|++|++|||||+|.+... ..+.+ ...+|..||++|++||
T Consensus 349 ~~~s~npAk~lgl~~-~G~L~~G~~ADlvi~D~~~~~~v~~~~~~s~~~~sp~~g~~~~G~v~~tiv~G~~v~ 420 (438)
T PRK07575 349 RWMSTAVARAYGIPN-KGRIAPGYDADLVLVDLNTYRPVRREELLTKCGWSPFEGWNLTGWPVTTIVGGQIVF 420 (438)
T ss_pred HHHhhhHHHHcCCCC-CCccCCCCcCCEEEEcCCCCEEEchHHccccCCCCCCCCCEEeeEEEEEEECCEEEE
Confidence 999999999999954 699999999999999987533 32322 1246899999999987
No 60
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=99.89 E-value=1.1e-21 Score=193.58 Aligned_cols=281 Identities=17% Similarity=0.086 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHHhcCcceeEeCccCC--CC-CccccchH-HHHHHHHHHHhcCCCeeEEEEccCCcc--hhhHHHHHHhc
Q 013175 115 REALLRASNLALSRGVTTVVDFGRYY--PG-ESVQLSWE-DFADVYQWASYSEKMKIRVCLFFPLET--WSSLADLINKT 188 (448)
Q Consensus 115 ~~~~~~~~~~~~~~GvTtv~d~~~~~--~~-~~~~~~~~-~~~~~~~~~~~~~~l~irv~~~~~~~~--~~~~~~~~~~~ 188 (448)
.+.+..+.++++++||||+.||.... |. +.....+. ...+.++....++++.+++.++..+.. ...+.++....
T Consensus 77 ~~~~~~~~~~a~~gG~Tt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD~~~h~~~~~~~~~~~~~l~~~~ 156 (383)
T PRK15446 77 DAALAAHDAQLAAAGITTVFDALSVGDEEDGGLRSRDLARKLIDAIEEARARGLLRADHRLHLRCELTNPDALELFEALL 156 (383)
T ss_pred HHHHHHHHHHHHhCCccEeeeeeEeccCCCCCcccHHHHHHHHHHHHHhhhcCchhccceeEEEEEecCcchHHHHHHHh
Confidence 46789999999999999999985321 21 21112121 122223322235677788877665432 22233332221
Q ss_pred CCcCCCCeeeCceEEEecCCcCCCCccc---cCCcC-CCCC-------------CCcccCCCHHHHHHHHHHHHHCCCcE
Q 013175 189 GHVLSDWVYLGGVKAFADGSLGSNSALF---HEPYA-DEPH-------------NYGLQVMELESLLSMTMASDKSGLQV 251 (448)
Q Consensus 189 ~~~~~~~~~~~g~K~f~DG~~~~~ta~~---~~py~-~~~~-------------~~g~~~~~~~~l~~~~~~a~~~g~~v 251 (448)
. ..+.++|.|+|.+++...-.. .+.|. ...+ ..-...++.++++.+++.|+++|+++
T Consensus 157 ~------~g~~~~k~fm~~~p~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~~~~~~e~i~~~v~~A~~~g~~v 230 (383)
T PRK15446 157 A------HPRVDLVSLMDHTPGQRQFRDLEKYREYYAGKYGLSDEEFDAFVEERIALSARYAPPNRRAIAALARARGIPL 230 (383)
T ss_pred c------CCCcCEEEEeCCCCccccccCHHHHHHHHHhhcCCCHHHHHHHHHHHHHhHhhcCHHHHHHHHHHHHHCCCce
Confidence 1 235679999999854211000 00011 0000 00012357889999999999999999
Q ss_pred EEEe-cchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhh
Q 013175 252 AIHA-IGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 330 (448)
Q Consensus 252 ~iHa-~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~ 330 (448)
.+|+ .+...+. .+.. .| -..++| ..+.+.++.+++.|+.+.+++.... +-+.. .
T Consensus 231 ~sH~~~~~~~i~-------~a~~-~G----v~~~e~--~~~~e~~~~~~~~g~~v~~~~p~~~--------r~~~~---~ 285 (383)
T PRK15446 231 ASHDDDTPEHVA-------EAHA-LG----VAIAEF--PTTLEAARAARALGMSVLMGAPNVV--------RGGSH---S 285 (383)
T ss_pred eecCCCCHHHHH-------HHHH-cC----CceeeC--CCcHHHHHHHHHCCCEEEeCCcccc--------cCCcc---c
Confidence 9999 4544332 2221 13 223455 4567888888889988876543211 00101 2
Q ss_pred hhhhHHHHHHcCCceeecCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCccccc
Q 013175 331 ESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLS 410 (448)
Q Consensus 331 ~~~~~~~~~~~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~ 410 (448)
...++++++++|+++++|||+. +.+++..+..... ..++++.++|+++|.|||+++|+++ +|+|+
T Consensus 286 ~~~~~~~~~~~Gv~~~lgSD~~--p~~~~~~~~~~~~------------~~gls~~~al~~~T~npA~~lgl~~-~G~I~ 350 (383)
T PRK15446 286 GNVSALDLAAAGLLDILSSDYY--PASLLDAAFRLAD------------DGGLDLPQAVALVTANPARAAGLDD-RGEIA 350 (383)
T ss_pred chHhHHHHHHCCCcEEEEcCCC--hhhHHHHHHHHHH------------hcCCCHHHHHHHHhHHHHHHcCCCC-CcCcC
Confidence 3467888999999999999973 3345444433321 2368999999999999999999976 49999
Q ss_pred CCCcccEEEecCCCCCChhhhccCeeeEEEECCEEecC
Q 013175 411 PGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 448 (448)
Q Consensus 411 ~Gk~ADlvvld~d~~~~~~~~~~~~v~~t~~~G~~V~~ 448 (448)
+|+.|||+|+|.++. ...+..||++|++||+
T Consensus 351 ~G~~ADlvv~d~~~~-------~~~v~~v~~~G~~v~~ 381 (383)
T PRK15446 351 PGKRADLVRVRRAGG-------LPVVRAVWRGGRRVFL 381 (383)
T ss_pred CCCcCCEEEEcCCCC-------CcchheEEECCEEEEe
Confidence 999999999998821 1358889999999984
No 61
>PRK13206 ureC urease subunit alpha; Reviewed
Probab=99.89 E-value=2.7e-21 Score=193.46 Aligned_cols=272 Identities=17% Similarity=0.171 Sum_probs=171.1
Q ss_pred HHHHhcCcceeEeCccCC-----CCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcch--hhHHHHHHhcCCcCCCC
Q 013175 123 NLALSRGVTTVVDFGRYY-----PGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETW--SSLADLINKTGHVLSDW 195 (448)
Q Consensus 123 ~~~~~~GvTtv~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~--~~~~~~~~~~~~~~~~~ 195 (448)
+.++++||||+.+|+... +.......|. ....+ ......++++.++...... ..+.++.+.
T Consensus 151 ~aALagGVTTvi~~G~gP~~~t~~~t~t~g~~~-l~~~~---~aa~~~pvn~g~~g~g~~~~~~~L~el~~a-------- 218 (573)
T PRK13206 151 DEALAAGITTLIGGGTGPAEGSKATTVTPGAWH-LARML---EALDGWPVNVALLGKGNTVSAEALWEQLRG-------- 218 (573)
T ss_pred HHHHcCCeEEEEcCCCCccccCcccccccchhH-HHHHH---HHhhcCceeEEEecCcCcCCHHHHHHHHHC--------
Confidence 788999999999985421 1111111121 11122 2233478888876532222 233333221
Q ss_pred eeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecch---HHHHHHHHHHHHhH
Q 013175 196 VYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGD---RANDLVLDMYKSVV 272 (448)
Q Consensus 196 ~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd---~a~~~~l~a~~~~~ 272 (448)
.+.|+|++.| | ..+++.+.++++.|.++|+++.+|+..- .-++..+.+
T Consensus 219 -GA~GfKi~~d-------------~----------g~t~~~i~~aL~~A~~~gv~V~iHadtlne~g~~E~t~aa----- 269 (573)
T PRK13206 219 -GAGGFKLHED-------------W----------GSTPAAIDACLRVADAAGVQVALHSDTLNEAGFVEDTLAA----- 269 (573)
T ss_pred -CCcEEeecCc-------------c----------CCCHHHHHHHHHHHHHhCCEEEEECCCccccchhhHHHHH-----
Confidence 2456776532 1 1468899999999999999999999632 122222222
Q ss_pred HhcCCCCCCCeEEecccCC---hhhHHHHH-hCCcEE-eeccccccC--chhHH----------HH------hcCHhhhh
Q 013175 273 VTTGKRDQRFRIEHAQHLA---SGTAARFG-DQGIVA-SMQPQHLLD--DADSA----------RK------KLGVDRAE 329 (448)
Q Consensus 273 ~~~~~~~~r~~i~H~~~~~---~~~i~~~~-~~gv~~-~~~P~~~~~--~~~~~----------~~------~~g~~r~~ 329 (448)
..+...|+.|..... ..+|-+++ ..+|-. |+.|+--+. ..+.. .. .+...|..
T Consensus 270 ----~~gr~iH~~H~egaggghapd~~~~~~~~n~lp~stnpt~p~~~nt~~e~~~m~m~~h~l~~~~~~d~~fa~srir 345 (573)
T PRK13206 270 ----IAGRSIHAYHTEGAGGGHAPDIITVASHPNVLPSSTNPTRPHTVNTLDEHLDMLMVCHHLNPAVPEDLAFAESRIR 345 (573)
T ss_pred ----hcCCeEEEEeccCCCcCcccHHHHhcCCCCCcCCCCCCCCCCcccchhhhhCeEEeeccCCCCCcchhhhhhhhcc
Confidence 134567888877553 23444443 445443 444442110 00000 00 01111110
Q ss_pred -hhhhhHHHHHHcCCceeecCCCCC------CCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHccc
Q 013175 330 -RESYLFQSLLANNALLALGSDWPV------ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 402 (448)
Q Consensus 330 -~~~~~~~~~~~~Gv~v~~gSD~p~------~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~ 402 (448)
.....=..|++.|+.+++|||+|+ ...+||..++.+++|... ...+.+.+.++++++|+++|+|||+++|+
T Consensus 346 ~~ti~ae~~l~d~G~~~~~~SDs~~~~~~~e~~~~~~q~a~~~~~rr~~--l~g~~~~~~~~v~~al~~yT~nPA~alG~ 423 (573)
T PRK13206 346 PSTIAAEDVLHDMGAISMIGSDSQAMGRIGEVVLRTWQTAHVMKRRRGA--LPGDGRADNNRARRYVAKYTICPAVAHGI 423 (573)
T ss_pred ceeeccCchHhhCCcEEeccCCccccccccchhhhHHHHHHHHHhccCC--CCCCCcccchhHHHHHHHHHHHHHHHhCC
Confidence 112222358999999999999997 567899999999988653 12344578899999999999999999999
Q ss_pred CCCcccccCCCcccEEEecCCCCCChhhhccCeeeEEEECCEEecC
Q 013175 403 ENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 448 (448)
Q Consensus 403 ~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v~~t~~~G~~V~~ 448 (448)
++.+|+|++||.||||+||.+.+. .++..||++|+++|.
T Consensus 424 ~~~~GsLe~Gk~ADlVvld~d~f~-------~~~~~ti~~G~iv~~ 462 (573)
T PRK13206 424 DHEIGSVEVGKLADLVLWEPAFFG-------VRPHAVLKGGAIAWA 462 (573)
T ss_pred CcCCcccCCCCcCCEEEECccccC-------CCccEEEECCEEEEe
Confidence 988999999999999999988664 357789999999983
No 62
>PRK00369 pyrC dihydroorotase; Provisional
Probab=99.89 E-value=2.7e-21 Score=190.28 Aligned_cols=274 Identities=18% Similarity=0.178 Sum_probs=166.3
Q ss_pred HHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcchhhHHHHHHhcCCcC
Q 013175 113 ERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVL 192 (448)
Q Consensus 113 ~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~~~~~~~~~~~~~~~ 192 (448)
+.++.+.+++++|+++|||||.||+++.|..+.. +.++...+. .++...+++.++..... ...++..
T Consensus 62 ~~~ed~~sgs~AAa~GGvTtv~~mPnt~P~~~~~----~~l~~~~~~-a~~~~~vd~~~~~~~~~--~~~el~~------ 128 (392)
T PRK00369 62 SYKEDVASGTSEAAYGGVTLVADMPNTIPPLNTP----EAITEKLAE-LEYYSRVDYFVYSGVTK--DPEKVDK------ 128 (392)
T ss_pred cccccHHHHHHHHHhCCcEEEEECCCCCCCCChH----HHHHHHHHH-hCcCCeEEEEEEeeccC--CHHHHHH------
Confidence 3578999999999999999999999765544322 222222222 23445678776643322 2222211
Q ss_pred CCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHH----------
Q 013175 193 SDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRAND---------- 262 (448)
Q Consensus 193 ~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~---------- 262 (448)
+.+.|+|.|.|+. .+.+ .++.+.+.+.++.+||+...-+.
T Consensus 129 ---~~~~g~k~f~~~~-----------------------~~~~----~~~~~~~~~~~v~~HaE~~~l~~~~~~~~rp~~ 178 (392)
T PRK00369 129 ---LPIAGYKIFPEDL-----------------------EREE----TFRVLLKSRKLKILHPEVPLALKSNRKLRRNCW 178 (392)
T ss_pred ---hhCceEEEECCCC-----------------------chHH----HHHHHHHhCCEEEEeCCCHHHhhcchhcccCHH
Confidence 2356789885321 1122 33334455589999998754322
Q ss_pred HHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHH------
Q 013175 263 LVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQ------ 336 (448)
Q Consensus 263 ~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~------ 336 (448)
....++..+... .+.||.|.+. .+.++++++.|+++++||+|++++.+. +. .+ +.+||+|
T Consensus 179 aE~~ai~~~~~~-----~~lhi~HvSt--~~~v~~ak~~gvt~Ev~pHhL~l~~~~-----~~-~~-k~~PPLR~~~dr~ 244 (392)
T PRK00369 179 YEIAALYYVKDY-----QNVHITHASN--PRTVRLAKELGFTVDITPHHLLVNGEK-----DC-LT-KVNPPIRDINERL 244 (392)
T ss_pred HHHHHHHHHHHh-----CCEEEEECCC--HHHHHHHHHCCCeEEechhHheeccCC-----CC-ce-EEeCCCCCHHHHH
Confidence 112222232221 5889999875 456788888899999999999876531 11 12 4455554
Q ss_pred ---HHHHcCCceeecCCCC-CCCC---CHHHHHHHHHcCCCCCCC--CCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcc
Q 013175 337 ---SLLANNALLALGSDWP-VADI---NPLCAIRTAMKRIPPGWD--NAWIPSERISLTDALIAHTLSAARACFLENDVG 407 (448)
Q Consensus 337 ---~~~~~Gv~v~~gSD~p-~~~~---~p~~~~~~a~~r~~~~~~--~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~G 407 (448)
+.++. +.+++||+. .+.. .+|.....++........ ..+.....++++++++++|.|||+++|++ .|
T Consensus 245 aL~~~l~~--id~i~SDHaP~~~~~K~~~f~~~~~Gi~GlE~~lpll~~~v~~~~lsl~~~v~~~s~nPA~ilgl~--~g 320 (392)
T PRK00369 245 WLLQALSE--VDAIASDHAPHSSFEKLQPYEVCPPGIAALSFTPPFIYTLVSKGILSIDRAVELISTNPARILGIP--YG 320 (392)
T ss_pred HHHHHHHh--CCEEEeCCCCCCHHHccCCHhhCCCCCeeHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCC--CC
Confidence 34444 789999963 3211 122111111100000000 00112456999999999999999999996 48
Q ss_pred cccCCCcccEEEecCCCCCC----------h-h-hhccCeeeEEEECCEEec
Q 013175 408 SLSPGKIADFVILSTSSWED----------F-A-AEVSASIEATYVSGVQAY 447 (448)
Q Consensus 408 si~~Gk~ADlvvld~d~~~~----------~-~-~~~~~~v~~t~~~G~~V~ 447 (448)
.|++|+.||||++|.+.+.. | + .-...+|..||++|++||
T Consensus 321 ~i~~G~~ADlvi~d~~~~~~~~~~sk~~~sp~~G~~l~G~v~~ti~~G~~v~ 372 (392)
T PRK00369 321 EIKEGYRANFTVIQFEDWRYSTKYSKVIETPLDGFELKASVYATIVQGKLAY 372 (392)
T ss_pred ccCCCCccCEEEEeCCceeEccccccCCCCCCCCCEeeeEEEEEEECCEEEE
Confidence 89999999999999875431 0 0 012458999999999997
No 63
>PRK09236 dihydroorotase; Reviewed
Probab=99.88 E-value=6.3e-21 Score=192.51 Aligned_cols=294 Identities=16% Similarity=0.195 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcchhhHHHHHHhcCCcCCC
Q 013175 115 REALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSD 194 (448)
Q Consensus 115 ~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (448)
++.+.+..+.++++|||||.||++..|.... . +.+....+ ..++...+++.++..... ..+.++.....
T Consensus 71 ~e~~~~~~~aa~~~GvTtv~d~p~~~p~~~~---~-~~~~~~~~-~~~~~~~~d~~~~~~~~~-~~~~e~~~l~~----- 139 (444)
T PRK09236 71 KGDIASESRAAVAGGITSFMEMPNTNPPTTT---L-EALEAKYQ-IAAQRSLANYSFYFGATN-DNLDEIKRLDP----- 139 (444)
T ss_pred cccHHHHHHHHHhCCcEEEEeCCCCCCCcCc---H-HHHHHHHH-HhccCeEEEEEEEeccCc-ccHHHHHHHHH-----
Confidence 3577888899999999999999865443322 1 11222122 223445667666543321 12323222110
Q ss_pred CeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHH--------
Q 013175 195 WVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLD-------- 266 (448)
Q Consensus 195 ~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~-------- 266 (448)
..+.|+|+|+....+ .....+.+.++++++ ..|.++.+|++.+.-+.....
T Consensus 140 -~g~~g~k~~~~~~~~-----------------~~~~~~~~~~~~~~~---~~~~~v~~H~e~~~~~~~~~~~~~~~~g~ 198 (444)
T PRK09236 140 -KRVCGVKVFMGASTG-----------------NMLVDNPETLERIFR---DAPTLIATHCEDTPTIKANLAKYKEKYGD 198 (444)
T ss_pred -ccCcEEEEEeccCCC-----------------CcccCcHHHHHHHHH---hcCCEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 135678998642111 000123455666654 448999999975433221111
Q ss_pred ------------------HHHHhHHhcCCCCCCCeEEecccCChhhHHHH---HhC--CcEEeeccccccCchhHHHHh-
Q 013175 267 ------------------MYKSVVVTTGKRDQRFRIEHAQHLASGTAARF---GDQ--GIVASMQPQHLLDDADSARKK- 322 (448)
Q Consensus 267 ------------------a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~---~~~--gv~~~~~P~~~~~~~~~~~~~- 322 (448)
++.++.......+.+.++.|++. .+.++.+ +.. .+++++||+|++.+.+.+...
T Consensus 199 ~~~~~~~~~~rp~~ae~~av~~~~~la~~~~~~~hi~h~st--~~~~~~i~~~~~~g~~vt~e~~~H~l~l~~~~~~~~~ 276 (444)
T PRK09236 199 DIPAEMHPLIRSAEACYKSSSLAVSLAKKHGTRLHVLHIST--AKELSLFENGPLAEKRITAEVCVHHLWFDDSDYARLG 276 (444)
T ss_pred CCChhhccccCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCC--HHHHHHHHHHHHCCCCEEEEEchhhhhcCHHHHhccC
Confidence 11111111112456889999884 3333333 223 588899999998876544321
Q ss_pred -----cCHhhhhhhhhhHHHHHHcCCceeecCCCCCCCCC----HH-------HHHHHHHcCCCCCCCCCCCCCCCCCHH
Q 013175 323 -----LGVDRAERESYLFQSLLANNALLALGSDWPVADIN----PL-------CAIRTAMKRIPPGWDNAWIPSERISLT 386 (448)
Q Consensus 323 -----~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~~----p~-------~~~~~a~~r~~~~~~~~~~~~~~ls~~ 386 (448)
.++.|......++.+++++|+++++|||+...... +| ..+...+... .....+..++++
T Consensus 277 ~~~~~~Pplr~~~~~~~l~~~l~~G~i~~igtDh~p~~~~~k~~~~~~~~~G~~~~e~~l~~l-----~~~v~~~~~~~~ 351 (444)
T PRK09236 277 NLIKCNPAIKTASDREALRQALADDRIDVIATDHAPHTWEEKQGPYFQAPSGLPLVQHALPAL-----LELVHEGKLSLE 351 (444)
T ss_pred ceEEECCCCCCHHHHHHHHHHHhCCCCcEEECCCCCCCHHHhcCCcccCCCCcccHHHHHHHH-----HHHHHhcCCCHH
Confidence 11222223445678899999999999997422100 00 0111100000 000123469999
Q ss_pred HHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCC-C-Chhhhc-------------cCeeeEEEECCEEecC
Q 013175 387 DALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSW-E-DFAAEV-------------SASIEATYVSGVQAYP 448 (448)
Q Consensus 387 ~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~-~-~~~~~~-------------~~~v~~t~~~G~~V~~ 448 (448)
++++++|.|||+++|+++ +|+|++|+.|||||+|.+.. . +.+++. ..+|..||++|++||.
T Consensus 352 ~~~~~~t~~pA~~lgl~~-~G~l~~G~~ADlvi~d~~~~~~~~~~~~~s~~~~sp~~g~~~~g~v~~t~v~G~~v~~ 427 (444)
T PRK09236 352 KVVEKTSHAPAILFDIKE-RGFIREGYWADLVLVDLNSPWTVTKENILYKCGWSPFEGRTFRSRVATTFVNGQLVYH 427 (444)
T ss_pred HHHHHHHHhHHHhcCCCC-CCccccCCcCCEEEEcCCCCEEEchHHhcccCCCCCCCCCEEeeeEEEEEECCEEEEE
Confidence 999999999999999964 79999999999999998743 2 323221 3479999999999973
No 64
>PRK01211 dihydroorotase; Provisional
Probab=99.88 E-value=3.5e-22 Score=197.63 Aligned_cols=282 Identities=14% Similarity=0.080 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcchhhHHHHHHhcCCcC
Q 013175 113 ERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVL 192 (448)
Q Consensus 113 ~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~~~~~~~~~~~~~~~ 192 (448)
+.++++.+++++|+++|||||.||+++.|..+.. +.++...+. .++...+++.++....... .++..
T Consensus 61 ~~ked~~s~s~AAaaGGvTtv~dmPnt~P~~~~~----e~~~~~~~~-a~~~s~vd~~~~~~~~~~~--~~~~~------ 127 (409)
T PRK01211 61 TEKEDFSTGTLSAIFGGTTFIMDMPNNNIPIKDY----NAFSDKLGR-VAPKAYVDFSLYSMETGNN--ALILD------ 127 (409)
T ss_pred cccCcHHHHHHHHHcCCcEEEEECCCCCCCCChH----HHHHHHHHH-hccCceeeEEEEeccCCch--hhHHh------
Confidence 3578999999999999999999999765544332 222222222 2334568877665432211 11111
Q ss_pred CCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHH---------
Q 013175 193 SDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDL--------- 263 (448)
Q Consensus 193 ~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~--------- 263 (448)
+.+.++|+|+++... + .+. .+.++ .++.+.+.|.++.+||+...-+..
T Consensus 128 ---~g~~~~k~f~~~~~~-----------~----~~~-~~~~~----~l~~~~~~g~~v~~H~E~~~l~~~~~~~~~~~~ 184 (409)
T PRK01211 128 ---ERSIGLKVYMGGTTN-----------T----NGT-DIEGG----EIKKINEANIPVFFHAELSECLRKHQFESKNLR 184 (409)
T ss_pred ---ccCcEEEEEcCCCcC-----------C----Ccc-ccCHH----HHHHHHccCCEEEEeccChHHhhhhhhCcchHh
Confidence 245689998654210 0 011 12222 345566899999999987553321
Q ss_pred ----------HHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhh
Q 013175 264 ----------VLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESY 333 (448)
Q Consensus 264 ----------~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~ 333 (448)
...++.++.... ..+.++.|++... .+ ..|++++||+|++++.+. .++. ++ +.+|
T Consensus 185 ~~~~~rP~~aE~~ai~~~~~la---~~~~hi~HvSt~~--~~-----~~vt~Ev~phhL~l~~~~---~~~~-~~-kvnP 249 (409)
T PRK01211 185 DHDLARPIECEIKAVKYVKNLD---LKTKIIAHVSSID--VI-----GRFLREVTPHHLLLNDDM---PLGS-YG-KVNP 249 (409)
T ss_pred hCCCCCCHHHHHHHHHHHHHHh---CCCcEEEEecChh--hc-----CceEEEecHHHHcccccc---ccCC-ce-eEcC
Confidence 011222222211 1268899987543 33 369999999999887643 1332 23 5566
Q ss_pred hHH---------HHHHcCCceeecCCCC-CCCC--CHHHHHHHHHcCCCCCCC--CCCCCCCCCCHHHHHHHHhHHHHHH
Q 013175 334 LFQ---------SLLANNALLALGSDWP-VADI--NPLCAIRTAMKRIPPGWD--NAWIPSERISLTDALIAHTLSAARA 399 (448)
Q Consensus 334 ~~~---------~~~~~Gv~v~~gSD~p-~~~~--~p~~~~~~a~~r~~~~~~--~~~~~~~~ls~~~al~~~T~n~A~~ 399 (448)
|+| +.+..|.+.+++||+. .... .+|.....++........ ..+..+.+||++++++++|.|||++
T Consensus 250 PLRs~~d~~aL~~~l~dG~ID~i~SDHaP~~~~eK~~~~~a~~G~~gle~~lpl~~~~v~~~~isl~~~v~~~s~nPAki 329 (409)
T PRK01211 250 PLRDRWTQERLLEEYISGRFDILSSDHAPHTEEDKQEFEYAKSGIIGVETRVPLFLALVKKKILPLDVLYKTAIERPASL 329 (409)
T ss_pred CCCCHHHHHHHHHHHhCCCCCEEeCCCCCCChhHhCCHhhCCCCCCcHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 665 4677899999999973 2211 111111111100000000 0012345799999999999999999
Q ss_pred cccCCCcccccCCCcccEEEecCCCCC--Chhhhc------------cCeeeEEEECCEEec
Q 013175 400 CFLENDVGSLSPGKIADFVILSTSSWE--DFAAEV------------SASIEATYVSGVQAY 447 (448)
Q Consensus 400 ~g~~~~~Gsi~~Gk~ADlvvld~d~~~--~~~~~~------------~~~v~~t~~~G~~V~ 447 (448)
||+. +|+|++|++|||||+|.+... ..+.+. -.+|..||++|++||
T Consensus 330 ~gl~--kG~l~~G~~ADlvi~D~~~~~~v~~~~~~s~~~~spf~G~~~~~v~~tiv~G~~v~ 389 (409)
T PRK01211 330 FGIK--KGKIEEGYDADFMAFDFTNIKKINDKRLHSKCPVSPFNGFDAIFPSHVIMRGEVVI 389 (409)
T ss_pred hCCC--CCcccCCCcCCEEEEcCCCeEEEChHHhhccCCCCCCCCCEeccEEEEEECCEEEE
Confidence 9994 799999999999999987533 222221 016899999999987
No 65
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]
Probab=99.88 E-value=4.2e-21 Score=192.58 Aligned_cols=199 Identities=26% Similarity=0.256 Sum_probs=147.5
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEecch-HHHHHHHH----HHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEE
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLD----MYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVA 305 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~gd-~a~~~~l~----a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~ 305 (448)
..+++.++.+.+.+.++|+++++|+.+. ..+...++ ..-......|..+.++.+.||.+.++++++++++.|+.+
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~v~iH~~E~~~e~~~~~~~~g~~~~~~~~~~g~l~~~~~~~H~~~~~~~e~~~l~~~g~~v 273 (421)
T COG0402 194 TVSPELLESLDELARKYGLPVHIHLAETLDEVERVLEPYGARPVERLDLLGLLGSHTLLAHCVHLSEEELELLAESGASV 273 (421)
T ss_pred CCCHHHHHHHHHHHhcCCCceEEEecCcHHHHHHHHhhcCCCHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHhhCCCeE
Confidence 4578999999999999999999999654 33444433 111222345667788999999999999999999999999
Q ss_pred eeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCC--CCCHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 013175 306 SMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERI 383 (448)
Q Consensus 306 ~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~--~~~p~~~~~~a~~r~~~~~~~~~~~~~~l 383 (448)
++||.+.. ++| .+.+|++++++.|+++++|||...+ ..+||..+..+........ .......
T Consensus 274 ~~cP~sN~--------~L~-----sG~~p~~~~~~~gv~v~~gTD~~~~~~~~d~l~~~~~a~~l~~~~~---~~~~~~~ 337 (421)
T COG0402 274 VHCPRSNL--------KLG-----SGIAPVRRLLERGVNVALGTDGAASNNVLDMLREMRTADLLQKLAG---GLLAAQL 337 (421)
T ss_pred EECcchhc--------ccc-----CCCCCHHHHHHcCCCEEEecCCccccChHHHHHHHHHHHHHHHhhc---CCCcccc
Confidence 99999732 355 3478999999999999999997544 3689988887743222110 0011112
Q ss_pred CHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC-Ch-h---hhc----cCeeeEEEECCEEec
Q 013175 384 SLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DF-A---AEV----SASIEATYVSGVQAY 447 (448)
Q Consensus 384 s~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~-~~-~---~~~----~~~v~~t~~~G~~V~ 447 (448)
.. ++|+++|.|+|+++|+ .+.|+|++|+.|||||+|.+... .+ . .+. ...|..|+++|+.++
T Consensus 338 ~~-~~l~~aT~~gA~alg~-~~~G~le~G~~ADlvvld~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~g~~v~ 408 (421)
T COG0402 338 PG-EALDMATLGGAKALGL-DDIGSLEVGKKADLVVLDASAPHLAPLRPVSRLVFAAGGKDVDRVLVDGRLVM 408 (421)
T ss_pred hH-HHHHHHHhhHHHHcCC-cccCCcccccccCEEEEcCCCCccccccHHHHHHHhcCCCceeEEEECCEEEE
Confidence 22 4999999999999998 45899999999999999988532 11 1 111 237999999999886
No 66
>PRK09060 dihydroorotase; Validated
Probab=99.88 E-value=1e-20 Score=190.53 Aligned_cols=292 Identities=21% Similarity=0.200 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcc--hhhHHHHHHhcCCc
Q 013175 114 RREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLET--WSSLADLINKTGHV 191 (448)
Q Consensus 114 ~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~--~~~~~~~~~~~~~~ 191 (448)
..+.+.+..++++++|||||.||++..|.... .+......+. ....+.+++.++..... ...+.++..
T Consensus 72 ~~e~~~t~~~aa~~gGvTtv~~~p~~~p~~~~---~~~~~~~~~~--a~~~~~~d~~~~~~~~~~~~~~l~el~~----- 141 (444)
T PRK09060 72 HKEDLETGSRAAVLGGVTAVFEMPNTNPLTTT---AEALADKLAR--ARHRMHCDFAFYVGGTRDNADELAELER----- 141 (444)
T ss_pred ccchHHHHHHHHHhCCcEEEEECCCCCCCCCh---HHHHHHHHHH--hcccceeeEEEEeccCCCCHHHHHHHHh-----
Confidence 35688899999999999999999865443332 1222222211 13346788776543322 112223221
Q ss_pred CCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHH--------
Q 013175 192 LSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDL-------- 263 (448)
Q Consensus 192 ~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~-------- 263 (448)
+..+.++|+|++.+.+ .....+...+.++++. .|.++.+||+.+.-+..
T Consensus 142 ---~~gv~g~k~fm~~~~~-----------------~~~~~d~~~l~~~~~~---~~~~v~~H~E~~~l~~~~~~~~~~g 198 (444)
T PRK09060 142 ---LPGCAGIKVFMGSSTG-----------------DLLVEDDEGLRRILRN---GRRRAAFHSEDEYRLRERKGLRVEG 198 (444)
T ss_pred ---hcCceEEEEEeccCCC-----------------CcccCCHHHHHHHHHh---CCCeEEEECCCHHHHHHHHHHHhcC
Confidence 1235678888743211 1112245566666544 48899999986543221
Q ss_pred -------------HHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHh--CCcEEeeccccccCchhH-HHHhcC---
Q 013175 264 -------------VLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGD--QGIVASMQPQHLLDDADS-ARKKLG--- 324 (448)
Q Consensus 264 -------------~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~--~gv~~~~~P~~~~~~~~~-~~~~~g--- 324 (448)
...++.++.......+.+.++.|++.. +.++.+++ ..+++++||+|+..+.+. +. .++
T Consensus 199 ~~~~~~~~~p~~aE~~av~~~~~la~~~~~~lhi~h~st~--~~v~~i~~~~~~vt~ev~ph~l~l~~~~~~~-~~~~~~ 275 (444)
T PRK09060 199 DPSSHPVWRDEEAALLATRRLVRLARETGRRIHVLHVSTA--EEIDFLADHKDVATVEVTPHHLTLAAPECYE-RLGTLA 275 (444)
T ss_pred CcccccccCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCCH--HHHHHHHHhCCCeEEEeChHHhccCchhhcc-cCCceE
Confidence 112233333222335678999998864 44444433 349999999998876543 22 122
Q ss_pred ----HhhhhhhhhhHHHHHHcCCceeecCCCC-CCCC---CHHH-------HHHHHHcCCCCCCCCCCCCCCCCCHHHHH
Q 013175 325 ----VDRAERESYLFQSLLANNALLALGSDWP-VADI---NPLC-------AIRTAMKRIPPGWDNAWIPSERISLTDAL 389 (448)
Q Consensus 325 ----~~r~~~~~~~~~~~~~~Gv~v~~gSD~p-~~~~---~p~~-------~~~~a~~r~~~~~~~~~~~~~~ls~~~al 389 (448)
|-|..+....+.+.++.|++.+++||+. .... .+|. ++...+... ........+++++++
T Consensus 276 k~~PPlr~~~~~~~l~~al~~G~id~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~l~-----~~~v~~g~l~~~~~~ 350 (444)
T PRK09060 276 QMNPPIRDARHRDGLWRGVRQGVVDVLGSDHAPHTLEEKAKPYPASPSGMTGVQTLVPIM-----LDHVNAGRLSLERFV 350 (444)
T ss_pred EEeCCCCCHHHHHHHHHHHhCCCccEEecCCCCCCHHHhcCCcccCCCCcccHHHHHHHH-----HHHHHcCCCCHHHHH
Confidence 2221122233456788899999999963 2110 0111 111111000 001124469999999
Q ss_pred HHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC--Chhhh-------------ccCeeeEEEECCEEec
Q 013175 390 IAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--DFAAE-------------VSASIEATYVSGVQAY 447 (448)
Q Consensus 390 ~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~--~~~~~-------------~~~~v~~t~~~G~~V~ 447 (448)
+++|.|||+++|+.+ +|+|++|+.|||||+|.+... +.+.+ ...+|..||++|++||
T Consensus 351 ~~~s~~pa~~~gl~~-~G~l~~G~~ADlvl~d~~~~~~v~~~~~~s~~~~sp~~g~~l~g~~~~tiv~G~~v~ 422 (444)
T PRK09060 351 DLTSAGPARIFGIAG-KGRIAVGYDADFTIVDLKRRETITNEWIASRCGWTPYDGKEVTGWPVGTIVRGQRVM 422 (444)
T ss_pred HHHhHhHHHHhCCCC-CCcccCCCcCCEEEEcCCCCEEEChHHhcccCCCCCCCCCEEeeeEEEEEECCEEEE
Confidence 999999999999954 799999999999999987432 22111 1357889999999997
No 67
>PRK13207 ureC urease subunit alpha; Reviewed
Probab=99.87 E-value=4.5e-21 Score=192.35 Aligned_cols=198 Identities=18% Similarity=0.167 Sum_probs=136.2
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecc--hH-HHHHHHHHHHHhHHhcCCCCCCCeEEecc----cCChhhHHHHHhCCcEE
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIG--DR-ANDLVLDMYKSVVVTTGKRDQRFRIEHAQ----HLASGTAARFGDQGIVA 305 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~g--d~-a~~~~l~a~~~~~~~~~~~~~r~~i~H~~----~~~~~~i~~~~~~gv~~ 305 (448)
+++.+.++++.|+++|+++.+|+.. +. -++..+.++ .+...|+.|.. --.++.++.++..|+..
T Consensus 226 t~~~l~~aL~~A~~~gv~V~iHa~tlne~G~~e~t~~a~---------~g~~iH~~H~egaggghapdii~~~~~~~v~p 296 (568)
T PRK13207 226 TPAAIDNCLSVADEYDVQVAIHTDTLNESGFVEDTIAAF---------KGRTIHTFHTEGAGGGHAPDIIKVAGEPNVLP 296 (568)
T ss_pred CHHHHHHHHHHHHHhCCEEEEeCCCcccchHHHHHHHhc---------CCCEEEEEeecCCCcCCchHHHHHhhcCCCcc
Confidence 5788999999999999999999952 11 123233322 23455666655 23467788888888765
Q ss_pred e-eccccccC--chhHH----------HHh------cCHhhhh-hhhhhHHHHHHcCCceeecCCCCCC-C--CCHHHHH
Q 013175 306 S-MQPQHLLD--DADSA----------RKK------LGVDRAE-RESYLFQSLLANNALLALGSDWPVA-D--INPLCAI 362 (448)
Q Consensus 306 ~-~~P~~~~~--~~~~~----------~~~------~g~~r~~-~~~~~~~~~~~~Gv~v~~gSD~p~~-~--~~p~~~~ 362 (448)
+ +.|+--+. ..+.. ... +...|.. .....=.-++++|+.+++|||+|+. . .+|+..+
T Consensus 297 ~st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~d~~~a~srir~~t~~ae~~l~d~Ga~~~~~SD~p~~~~~~~~~~r~~ 376 (568)
T PRK13207 297 SSTNPTRPYTVNTIDEHLDMLMVCHHLDPSIPEDVAFAESRIRRETIAAEDILHDLGAISMISSDSQAMGRVGEVIIRTW 376 (568)
T ss_pred CCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccceeecccchhhhCCCEEEecCCcccccccccchhHHH
Confidence 4 44542110 00000 000 1111110 1111112388999999999999977 4 7899999
Q ss_pred HHHHcCCCCCCC----CCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCeeeE
Q 013175 363 RTAMKRIPPGWD----NAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEA 438 (448)
Q Consensus 363 ~~a~~r~~~~~~----~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v~~ 438 (448)
+.|++|+...+. ..+.+.++++++ |+++|+|||+++|+++.+|+|++||.||||||+.+++. .++..
T Consensus 377 q~A~~r~~~~G~~~~d~~~~~n~ri~~~--l~~~T~npA~alG~~~~vGsIe~Gk~ADlVvld~d~f~-------~~~~~ 447 (568)
T PRK13207 377 QTAHKMKVQRGPLPGDSGRNDNFRVKRY--IAKYTINPAIAHGISHEVGSVEVGKLADLVLWKPAFFG-------VKPEL 447 (568)
T ss_pred HHHHHHHHccCCCCcccccCccchHHHH--HHHHhHHHHHHcCCCcCccccCCCCcCCEEEECchhcC-------CCceE
Confidence 999998754221 235667788887 99999999999999998999999999999999988765 24678
Q ss_pred EEECCEEecC
Q 013175 439 TYVSGVQAYP 448 (448)
Q Consensus 439 t~~~G~~V~~ 448 (448)
||++|+++|.
T Consensus 448 ti~~G~iv~~ 457 (568)
T PRK13207 448 VLKGGMIAWA 457 (568)
T ss_pred EEECCEEEEe
Confidence 9999999873
No 68
>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.
Probab=99.87 E-value=1.2e-20 Score=189.04 Aligned_cols=186 Identities=17% Similarity=0.197 Sum_probs=132.1
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCCh----------hhHHHHHhC
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS----------GTAARFGDQ 301 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~----------~~i~~~~~~ 301 (448)
.+++++.++++.+.++|.++.+|++++.. ..+.+++++.......+.|.+|.|++.... +.++++++.
T Consensus 196 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~--~e~~av~~~~~~a~~~g~r~~i~H~ss~~~~~~~~~~~~l~~i~~a~~~ 273 (415)
T cd01297 196 AGTAELVALARVAARYGGVYQTHVRYEGD--SILEALDELLRLGRETGRPVHISHLKSAGAPNWGKIDRLLALIEAARAE 273 (415)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEECcccc--cHHHHHHHHHHHHHHhCCCEEEEEEecCCCcccchHHHHHHHHHHHHHh
Confidence 57899999999999999999999987631 223344444433333467999999998765 566676664
Q ss_pred --CcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCCCC-C-----HHHHHHHHHcCCCCCC
Q 013175 302 --GIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADI-N-----PLCAIRTAMKRIPPGW 373 (448)
Q Consensus 302 --gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~-~-----p~~~~~~a~~r~~~~~ 373 (448)
++++++||+++.. ..+++.+++. .+++++||++..+. . -+..+.....+
T Consensus 274 G~~v~~e~~p~~~~~-----------------~~~~~~l~~~-~~~~i~SDh~~~~~~~~~~~~~~~~~l~~~~~----- 330 (415)
T cd01297 274 GLQVTADVYPYGAGS-----------------EDDVRRIMAH-PVVMGGSDGGALGKPHPRSYGDFTRVLGHYVR----- 330 (415)
T ss_pred CCcEEEEeCCCCCCc-----------------HHHHHHHHcC-CCceeeeCCCcCCCCCcchhCCHHHHHHHHhc-----
Confidence 5777899976532 1356677777 99999999754221 0 11111110000
Q ss_pred CCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC-Chh----hhccCeeeEEEECCEEecC
Q 013175 374 DNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFA----AEVSASIEATYVSGVQAYP 448 (448)
Q Consensus 374 ~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~-~~~----~~~~~~v~~t~~~G~~V~~ 448 (448)
....++++++++++|.|||+++|+++ +|+|++|+.|||||+|.+.+. .+. ......|..||++|++||.
T Consensus 331 -----~~~~~~~~~~~~~~t~~pA~~~gl~~-~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~v~~viv~G~~v~~ 404 (415)
T cd01297 331 -----ERKLLSLEEAVRKMTGLPARVFGLAD-RGRIAPGYRADIVVFDPDTLADRATFTRPNQPAEGIEAVLVNGVPVVR 404 (415)
T ss_pred -----ccCCCCHHHHHHHHHHHHHHHhCCCC-CceeCCCCCCCEEEEcccccccccchhhhccCCCCceEEEECCEEEEE
Confidence 12348999999999999999999974 699999999999999998654 221 1123469999999999973
No 69
>PRK04250 dihydroorotase; Provisional
Probab=99.86 E-value=1.1e-20 Score=186.95 Aligned_cols=283 Identities=16% Similarity=0.086 Sum_probs=165.1
Q ss_pred HHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcchhhHHHHHHhcCCcCC
Q 013175 114 RREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLS 193 (448)
Q Consensus 114 ~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~~~~~~~~~~~~~~~~ 193 (448)
.++.+.++++.++++||||+.||+++.|..... +.++...+. .++...+++.++. ... ....++....
T Consensus 63 ~~e~~~~~~~aa~~gGvTtv~~~p~~~p~~~~~----~~~~~~~~~-~~~~~~vd~~~~~-~~~-~~~~~l~~l~----- 130 (398)
T PRK04250 63 YKETIESGTKAALHGGITLVFDMPNTKPPIMDE----KTYEKRMRI-AEKKSYADYALNF-LIA-GNCEKAEEIK----- 130 (398)
T ss_pred cHHHHHHHHHHHHhCCeEEEEECCCCCCCCCcH----HHHHHHHHH-hCcCceeeEEEEE-ecC-CCHHHHHHHH-----
Confidence 457889999999999999999998765544332 222222222 2345567777654 221 1222222110
Q ss_pred CCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHH--------HHH
Q 013175 194 DWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRAND--------LVL 265 (448)
Q Consensus 194 ~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~--------~~l 265 (448)
..++|+|+..+.+ + ...+.+... ..+.+..+.+||+.+.-+. ...
T Consensus 131 ----~~~~k~f~~~~~~-----------------~---~~~~~~~~~---~~~~~~~v~~H~E~~~~~~~~~~~p~~aE~ 183 (398)
T PRK04250 131 ----ADFYKIFMGASTG-----------------G---IFSENFEVD---YACAPGIVSVHAEDPELIREFPERPPEAEV 183 (398)
T ss_pred ----hhheEEEEecCCC-----------------c---hhHHHHHHH---HHhcCCeEEEEecChhhhhcccCCCHHHHH
Confidence 1246887632100 0 111222222 2233557999998653211 122
Q ss_pred HHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCC---cEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHH----
Q 013175 266 DMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQG---IVASMQPQHLLDDADSARKKLGVDRAERESYLFQSL---- 338 (448)
Q Consensus 266 ~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~g---v~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~---- 338 (448)
.++.++.......+.+.+|.|.+. .+.++.+++.| |++++||+|++++.+.+ . .+. ++ +.+||+|+-
T Consensus 184 ~av~r~~~la~~~~~~lhi~HvSt--~~~~~~i~~~g~~~vt~Ev~ph~L~l~~~~~-~-~~~-~~-k~~PPLR~~~d~~ 257 (398)
T PRK04250 184 VAIERALEAGKKLKKPLHICHIST--KDGLKLILKSNLPWVSFEVTPHHLFLTRKDY-E-RNP-LL-KVYPPLRSEEDRK 257 (398)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCC--HHHHHHHHHcCCCcEEEEeCHHHhccCHHHH-C-CCC-ce-EEcCCCCCHHHHH
Confidence 233333333333467899999875 44455555544 89999999999887655 2 332 33 667777641
Q ss_pred --HH-cCCceeecCCCC-CCC------CCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCccc
Q 013175 339 --LA-NNALLALGSDWP-VAD------INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGS 408 (448)
Q Consensus 339 --~~-~Gv~v~~gSD~p-~~~------~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gs 408 (448)
++ -+-+.+++||+. .+. ..-+.++...+... .....++.||++++++++|.|||+++|+++ +|
T Consensus 258 aL~~~l~~Id~i~sDHaP~~~~~k~~~~~G~~g~e~~lpl~-----~~~v~~~~lsl~~~v~~~t~npAk~lgl~~-~G- 330 (398)
T PRK04250 258 ALWENFSKIPIIASDHAPHTLEDKEAGAAGIPGLETEVPLL-----LDAANKGMISLFDIVEKMHDNPARIFGIKN-YG- 330 (398)
T ss_pred HHHHhhccCCEEEcCCcccCHHHhhcCCCCcchHHHHHHHH-----HHHHHhcCCCHHHHHHHHHHHHHHHhCCCC-cC-
Confidence 11 134789999973 211 11111121111100 001134579999999999999999999964 79
Q ss_pred ccCCCcccEEEecCCCCC--Chhhh-------------ccCeeeEEEECCEEecC
Q 013175 409 LSPGKIADFVILSTSSWE--DFAAE-------------VSASIEATYVSGVQAYP 448 (448)
Q Consensus 409 i~~Gk~ADlvvld~d~~~--~~~~~-------------~~~~v~~t~~~G~~V~~ 448 (448)
|++|++|||||+|.+... +.+.+ ...+|..||++|++||.
T Consensus 331 L~~G~~ADlvi~D~~~~~~v~~~~~~s~~~~sp~~g~~l~g~v~~tiv~G~~v~~ 385 (398)
T PRK04250 331 IEEGNYANFAVFDMKKEWTIKAEELYTKAGWTPYEGFKLKGKVIMTILRGEVVME 385 (398)
T ss_pred ccCCCcCCEEEEcCCCcEEEChhhccccCCCCCCCCCEEeeEEEEEEECCEEEEE
Confidence 999999999999987432 21111 13478999999999973
No 70
>PRK07369 dihydroorotase; Provisional
Probab=99.86 E-value=1.3e-21 Score=194.97 Aligned_cols=271 Identities=17% Similarity=0.138 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcch---hhHHHHHHhcCC
Q 013175 114 RREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETW---SSLADLINKTGH 190 (448)
Q Consensus 114 ~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~---~~~~~~~~~~~~ 190 (448)
.++.+.++.++++++|||||.||++..|..+.. +.++.+++.. ++...+++.++...... ..+.++....
T Consensus 73 ~~e~~~s~~~aa~~GGvTtv~~~pn~~P~~~~~----~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~~~~~~ei~~l~-- 145 (418)
T PRK07369 73 ERETLASLAAAAAAGGFTRVAILPDTFPPLDNP----ATLARLQQQA-QQIPPVQLHFWGALTLGGQGKQLTELAELA-- 145 (418)
T ss_pred CCccHHHHHHHHHhCCceEEEECCCCCCCCCCH----HHHHHHHHHh-cccCceeEEEEEEEeeCCCCccHhhHHHHH--
Confidence 457889999999999999999998765544332 2222222222 23456777765443211 1122222111
Q ss_pred cCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHH--------
Q 013175 191 VLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRAND-------- 262 (448)
Q Consensus 191 ~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~-------- 262 (448)
-.|++.|.++ ....+...+.++++.+.+.|.++.+|++...-+.
T Consensus 146 -------~~Gv~~f~~~---------------------~~~~~~~~l~~~~~~~~~~~~~v~~H~Ed~~l~~~~~~~~g~ 197 (418)
T PRK07369 146 -------AAGVVGFTDG---------------------QPLENLALLRRLLEYLKPLGKPVALWPCDRSLAGNGVMREGL 197 (418)
T ss_pred -------HCCCEEEECC---------------------CcCCCHHHHHHHHHHHHhcCCeEEEecCChhhhhcCcccCCh
Confidence 0234444322 1123466788999999999999999998654211
Q ss_pred -------------HHHHHHHHhHHhcCCCCCCCeEEecccCCh-hhHHHHHhCC--cEEeeccccccCchhHHHHhcCHh
Q 013175 263 -------------LVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARKKLGVD 326 (448)
Q Consensus 263 -------------~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~-~~i~~~~~~g--v~~~~~P~~~~~~~~~~~~~~g~~ 326 (448)
....++.++.......+.+.+|.|++.... +.+.++++.| +++++||+|++++.+.+.. .+.
T Consensus 198 ~~~~~~~~~~p~~aE~~av~r~~~la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~phhL~l~~~~~~~-~~~- 275 (418)
T PRK07369 198 LALRLGLPGDPASAETTALAALLELVAAIGTPVHLMRISTARSVELIAQAKARGLPITASTTWMHLLLDTEALAS-YDP- 275 (418)
T ss_pred hHHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEecHHHHhccHHHHhc-cCC-
Confidence 011222232222223467999999886543 4555555554 8899999999987765432 221
Q ss_pred hhhhhhhhHH---------HHHHcCCceeecCCCC-CCC---CCHHHHHHHHHcCCCCCCCC---CCCCCCCCCHHHHHH
Q 013175 327 RAERESYLFQ---------SLLANNALLALGSDWP-VAD---INPLCAIRTAMKRIPPGWDN---AWIPSERISLTDALI 390 (448)
Q Consensus 327 r~~~~~~~~~---------~~~~~Gv~v~~gSD~p-~~~---~~p~~~~~~a~~r~~~~~~~---~~~~~~~ls~~~al~ 390 (448)
++ +.+||+| +.+..|.+.+++||+. .+. ..+|.....++......... .+.....++++++++
T Consensus 276 ~~-kv~PPLR~~~d~~aL~~~l~~G~Id~i~SDHaP~~~~~K~~~~~~~~~G~~G~e~~l~~~~~~~v~~~~i~l~~~v~ 354 (418)
T PRK07369 276 NL-RLDPPLGNPSDRQALIEGVRTGVIDAIAIDHAPYTYEEKTVAFAEAPPGAIGLELALPLLWQNLVETGELSALQLWQ 354 (418)
T ss_pred Cc-EECCCCCCHHHHHHHHHHHhcCCCCEEEcCCCCCCHHHccCCHhHCCCCceeHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 22 4555655 4677899999999973 321 01222111111100000000 011244689999999
Q ss_pred HHhHHHHHHcccCCCcccccCCCcccEEEecCCC
Q 013175 391 AHTLSAARACFLENDVGSLSPGKIADFVILSTSS 424 (448)
Q Consensus 391 ~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~ 424 (448)
++|.|||+++|++ .|+|++|++|||+++|.+.
T Consensus 355 ~~s~nPA~~lgl~--~G~i~~G~~ADlvi~d~~~ 386 (418)
T PRK07369 355 ALSTNPARCLGQE--PPSLAPGQPAELILFDPQK 386 (418)
T ss_pred HHHHhHHHHhCCC--cCcccCCCcCCEEEEcCCC
Confidence 9999999999996 4999999999999999874
No 71
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.85 E-value=2.8e-20 Score=182.44 Aligned_cols=177 Identities=26% Similarity=0.303 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCc
Q 013175 236 SLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDD 315 (448)
Q Consensus 236 ~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~ 315 (448)
.++.++..++. .+++.+||.++..+..+++..++. + .+..|+|+... .+.++++++.|+.++++|.+....
T Consensus 181 ~l~~l~~~~~~-~~~v~vHa~~~~~i~~~l~~~~e~----g---~~~~i~H~~~~-~~~~~~la~~gv~v~~~P~~~~~~ 251 (359)
T cd01309 181 KLEALLPVLKG-EIPVRIHAHRADDILTAIRIAKEF----G---IKITIEHGAEG-YKLADELAKHGIPVIYGPTLTLPK 251 (359)
T ss_pred cHHHHHHHHcC-CeeEEEEeCCHHHHHHHHHHHHHc----C---CCEEEECchhH-HHHHHHHHHcCCCEEECccccccc
Confidence 34555554443 399999999988877777665442 3 46899999877 778899999999999999874322
Q ss_pred hhHHHHhcCHhhhhhhhhhHHHHHHcC-CceeecCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHh
Q 013175 316 ADSARKKLGVDRAERESYLFQSLLANN-ALLALGSDWPVADINP-LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHT 393 (448)
Q Consensus 316 ~~~~~~~~g~~r~~~~~~~~~~~~~~G-v~v~~gSD~p~~~~~p-~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T 393 (448)
.. . .+. ....+++.+.++| +++++|||+|..+... +..+..++ ..+++.+++|+++|
T Consensus 252 ~~--~-----~~~-~~~~~~~~l~~aGGv~valgsD~~~~~~~~l~~~~~~a~-------------~~gl~~~~al~~~T 310 (359)
T cd01309 252 KV--E-----EVN-DAIDTNAYLLKKGGVAFAISSDHPVLNIRNLNLEAAKAV-------------KYGLSYEEALKAIT 310 (359)
T ss_pred cH--H-----Hhh-cchhhHHHHHHcCCceEEEECCCCCccchhHHHHHHHHH-------------HcCCCHHHHHHHHH
Confidence 11 0 111 3456889999998 9999999998644332 22222222 23589999999999
Q ss_pred HHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCeeeEEEECCEEec
Q 013175 394 LSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 447 (448)
Q Consensus 394 ~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v~~t~~~G~~V~ 447 (448)
.|||+++|+++++|+|++||.|||||+|.||+.. ..+|..||++|++||
T Consensus 311 ~n~A~~lg~~~~~G~l~~G~~ADlvv~d~dpl~~-----~~~v~~v~i~G~~v~ 359 (359)
T cd01309 311 INPAKILGIEDRVGSLEPGKDADLVVWNGDPLEP-----TSKPEQVYIDGRLVY 359 (359)
T ss_pred HHHHHHhCCCCCcccCCCCCccCEEEECCCcccc-----cCcccEEEECCEEeC
Confidence 9999999999888999999999999999998863 347999999999997
No 72
>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.85 E-value=3.1e-20 Score=174.78 Aligned_cols=200 Identities=21% Similarity=0.249 Sum_probs=143.6
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecchH-HHHHHHHHHHH------hHHhcCCCCCCCeEEecccCChhhHHHHHhCCcE
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGDR-ANDLVLDMYKS------VVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIV 304 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd~-a~~~~l~a~~~------~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~ 304 (448)
.+.+.+.+..+.|+.+++++.+|..... .+..+.+.+.. +....+..+....+.|+.++++++++.|++.|..
T Consensus 217 c~k~v~~~l~~lak~~~l~~q~hIsen~~EI~~~~~ff~~~~~y~~~yd~~~lL~~ktvlaH~~hl~d~ei~~l~k~g~s 296 (439)
T KOG3968|consen 217 CSKGVFEELSKLAKYHNLHIQIHISENGKEIEAVKNFFPEKLSYTDVYDKGGLLTEKTVLAHLEHLSDEEIELLAKRGCS 296 (439)
T ss_pred CcchhHHHHHHHHHhhhhhhhhhhhhcHHHHHHHHHhhhhcccchHHHHHhcccchHhHhhhheecCchhHHHHHhcCCc
Confidence 3455666666777779999999986543 34444443322 1222344555778999999999999999999999
Q ss_pred EeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 013175 305 ASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERIS 384 (448)
Q Consensus 305 ~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls 384 (448)
+++||.+.. .++ .+.+|+|++++.|+.|++|||-. +.+....+..|+.....- ....+...||
T Consensus 297 vshCP~Sn~--------~L~-----sG~~~vr~lL~~~v~VgLGtDv~--~~s~l~a~r~A~~~s~hL--~~~~~~~~Ls 359 (439)
T KOG3968|consen 297 VSHCPTSNS--------ILG-----SGIPRVRELLDIGVIVGLGTDVS--GCSILNALRQAMPMSMHL--ACVLDVMKLS 359 (439)
T ss_pred eEECCcchh--------hhc-----cCCccHHHHHhcCceEeecCCcc--ccccHHHHHHHHHHHHHH--HhccCcccCC
Confidence 999999842 233 46789999999999999999953 233333333332211100 0011345799
Q ss_pred HHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC-Ch------hhhc--------cCeeeEEEECCEEecC
Q 013175 385 LTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DF------AAEV--------SASIEATYVSGVQAYP 448 (448)
Q Consensus 385 ~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~-~~------~~~~--------~~~v~~t~~~G~~V~~ 448 (448)
++++|.++|.|+|+++|+++..|++++||.+|++++|.+.+. .. ++++ +.++..+|++|+.|+.
T Consensus 360 ~~e~L~lATi~GA~aLg~d~~~Gs~eVGK~fDai~id~s~~~~~l~~~~~~~~lI~~~v~~g~drni~~V~V~Gk~v~~ 438 (439)
T KOG3968|consen 360 MEEALYLATIGGAKALGRDDTHGSLEVGKYFDAIIIDLSAPESPLYRFSGHHDLISKVVYNGDDRNIAEVFVAGKLVKQ 438 (439)
T ss_pred HHHHHHHHhccchhhccCCCcccceecccccceEEEeCCCCcchhhhccchHHHHHHHHhcCCCCceEEEEEccEEecc
Confidence 999999999999999999999999999999999999988653 11 2221 2489999999999863
No 73
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=99.84 E-value=1.3e-19 Score=179.16 Aligned_cols=288 Identities=18% Similarity=0.161 Sum_probs=172.3
Q ss_pred HHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcchh---hHHHHHHhcCC
Q 013175 114 RREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWS---SLADLINKTGH 190 (448)
Q Consensus 114 ~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~~---~~~~~~~~~~~ 190 (448)
.++.+.+.+++++.+|||||.||++..|...+. ..+..+++.. ++...+.+.++....... .+.++....
T Consensus 30 ~~e~~~s~s~aA~~GGvTtii~~p~~~p~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~-- 102 (374)
T cd01317 30 YKETLESGAKAAAAGGFTTVVCMPNTNPVIDNP----AVVELLKNRA-KDVGIVRVLPIGALTKGLKGEELTEIGELL-- 102 (374)
T ss_pred ccchHHHHHHHHHhCCCcEEEECCCCCCCCCCH----HHHHHHHHHh-ccCCceeEEEEEEEeeCCCcccHHHHHHHH--
Confidence 467889999999999999999998765544332 2222222221 222334444333321111 122222111
Q ss_pred cCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHH-------
Q 013175 191 VLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDL------- 263 (448)
Q Consensus 191 ~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~------- 263 (448)
-.|++.|.+. +....+...+.++++.+.+.|.++.+|++....+..
T Consensus 103 -------~~G~~~~k~~--------------------~~~~~~~~~l~~~~~~~~~~g~~v~~H~E~~~~~~~~~~~~g~ 155 (374)
T cd01317 103 -------EAGAVGFSDD--------------------GKPIQDAELLRRALEYAAMLDLPIIVHPEDPSLAGGGVMNEGK 155 (374)
T ss_pred -------HCCcEEEEcC--------------------CcCCCCHHHHHHHHHHHHhcCCeEEEecCChhhhhccCccCCh
Confidence 0123333211 112356788999999999999999999975432210
Q ss_pred --------------HHHHHHHhHHhcCCCCCCCeEEecccCCh-hhHHHHHhCC--cEEeeccccccCchhHHHHh----
Q 013175 264 --------------VLDMYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARKK---- 322 (448)
Q Consensus 264 --------------~l~a~~~~~~~~~~~~~r~~i~H~~~~~~-~~i~~~~~~g--v~~~~~P~~~~~~~~~~~~~---- 322 (448)
...++.++.......+.+.++.|++.... +.+.++++.| +++++||+|+..+.+.+...
T Consensus 156 ~~~~~~~~~~p~~~e~~~v~~~~~la~~~~~~i~i~h~ss~~~l~~i~~~~~~G~~~~~e~~~h~L~ld~~~~~~~~~~~ 235 (374)
T cd01317 156 VASRLGLPGIPPEAETIMVARDLELAEATGARVHFQHLSTARSLELIRKAKAKGLPVTAEVTPHHLLLDDEALESYDTNA 235 (374)
T ss_pred hhHHhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCCEEEEecHHHHhcCHHHHhccCCce
Confidence 01122233222223457899999885332 4555666666 77899999988776554221
Q ss_pred --cCHhhhhhhhhhHHHHHHcCCceeecCCCCCCCC----CHHH---------H--HHHHHcCCCCCCCCCCCCCCCCCH
Q 013175 323 --LGVDRAERESYLFQSLLANNALLALGSDWPVADI----NPLC---------A--IRTAMKRIPPGWDNAWIPSERISL 385 (448)
Q Consensus 323 --~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~----~p~~---------~--~~~a~~r~~~~~~~~~~~~~~ls~ 385 (448)
.++.|......++.+++++|+++++|||+..... .+|. . +...++. +.....+++
T Consensus 236 k~~Pplr~~~~~~~l~~~~~~G~i~~igsDh~p~~~~~k~~~~~~~~~Gi~g~e~~l~~~~~~--------~~~~~~~~~ 307 (374)
T cd01317 236 KVNPPLRSEEDREALIEALKDGTIDAIASDHAPHTDEEKDLPFAEAPPGIIGLETALPLLWTL--------LVKGGLLTL 307 (374)
T ss_pred EEcCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHccCCHhhCCCcHhHHHHHHHHHHHH--------HHHcCCCCH
Confidence 1122221245677889999999999999753221 1122 1 1111111 112345899
Q ss_pred HHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC--ChhhhccCeeeEEEECCEEe
Q 013175 386 TDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--DFAAEVSASIEATYVSGVQA 446 (448)
Q Consensus 386 ~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~--~~~~~~~~~v~~t~~~G~~V 446 (448)
+++++++|.|||+++|++ .|+|++|++|||+++|.+... ..+.+ ..+...+.+.|+.+
T Consensus 308 ~~~~~~~t~npA~~lgl~--~G~l~~G~~ADlvi~d~~~~~~~~~~~~-~s~~~~sp~~G~~l 367 (374)
T cd01317 308 PDLIRALSTNPAKILGLP--PGRLEVGAPADLVLFDPDAEWIVDEETF-RSKSKNTPFDGQKL 367 (374)
T ss_pred HHHHHHHHHHHHHHhCCC--CCcccCCCcCCEEEECCCCCEEEChhhc-cccCCCCCCCCCEE
Confidence 999999999999999997 499999999999999988543 33333 33566666666554
No 74
>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism]
Probab=99.84 E-value=1.1e-20 Score=177.04 Aligned_cols=305 Identities=17% Similarity=0.145 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcchhh-HHHHHHhcCCcCC
Q 013175 115 REALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSS-LADLINKTGHVLS 193 (448)
Q Consensus 115 ~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~~~-~~~~~~~~~~~~~ 193 (448)
.++|.++.++|+++|+|.|.||....++. ++-+.++.++.. +.+++.+++.++..+..|.. +.+.++..-
T Consensus 85 ~DdF~~GTkAAlaGGtTmiID~vlp~~~~----slv~afe~wr~~-Ad~k~cCDyglhv~It~W~~~v~eem~~l~---- 155 (522)
T KOG2584|consen 85 VDDFFQGTKAALAGGTTMIIDFVLPDKGT----SLVEAFEKWREW-ADPKVCCDYGLHVGITWWSPSVKEEMEILV---- 155 (522)
T ss_pred hhhhhcccHHHhcCCceEEEEEecCCCCc----hHHHHHHHHHhh-cCCceeeeeeeeEeeeecCcchHHHHHHHh----
Confidence 57899999999999999999996432221 222233334333 35688899998876655532 222211100
Q ss_pred CCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHH----------
Q 013175 194 DWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDL---------- 263 (448)
Q Consensus 194 ~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~---------- 263 (448)
.-..++++|+|+ .+.+++.+++++|.+.++.+++.|....+||+...++..
T Consensus 156 ~ekGvnsF~~fm-------------------ayk~~~~v~d~~lye~l~~~~~lgala~vHAEngd~iae~q~~~l~~gi 216 (522)
T KOG2584|consen 156 KEKGVNSFKFFM-------------------AYKDLYMVRDSELYEALKVCAELGALAMVHAENGDAIAEGQQRLLELGI 216 (522)
T ss_pred hhcCcceEEeee-------------------eeccccccCHHHHHHHHHHHhhcchhheehhhcchhhhhhhhHHHHcCC
Confidence 013467788886 234677889999999999999999999999975443321
Q ss_pred --------------HHHHHHHhHHhcCCCCCCCeEEecccCCh-hhHHHHHhCCcEEeeccc--cccCchhHH-HH-hcC
Q 013175 264 --------------VLDMYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQGIVASMQPQ--HLLDDADSA-RK-KLG 324 (448)
Q Consensus 264 --------------~l~a~~~~~~~~~~~~~r~~i~H~~~~~~-~~i~~~~~~gv~~~~~P~--~~~~~~~~~-~~-~~g 324 (448)
..++..++..-....++...+.|....+. +.|.+.++.|-.+---|. ++..++..| .+ ..+
T Consensus 217 tgPEgh~lSRPee~EaEA~~rai~ia~~~ncPlyvvhVmsksaa~~Ia~aRk~g~~v~gepita~l~~dg~hy~~~~w~~ 296 (522)
T KOG2584|consen 217 TGPEGHELSRPEELEAEATNRAITIARQANCPLYVVHVMSKSAADAIALARKKGRVVFGEPITASLGTDGSHYWSKDWDH 296 (522)
T ss_pred cCcccccccCchhhhHHHHHHHHHHHHhcCCCcceEEEeehhHHHHHHHHHhcCceeecccchhhhcccchhhccCChhh
Confidence 11233333333334567889999876654 667777776754433332 222222111 10 011
Q ss_pred Hhhhhhhhhh----------HHHHHHcCCceeecCCCC-CCC------CCHHHHHHHHHcCCCCCCCCCC---CCCCCCC
Q 013175 325 VDRAERESYL----------FQSLLANNALLALGSDWP-VAD------INPLCAIRTAMKRIPPGWDNAW---IPSERIS 384 (448)
Q Consensus 325 ~~r~~~~~~~----------~~~~~~~Gv~v~~gSD~p-~~~------~~p~~~~~~a~~r~~~~~~~~~---~~~~~ls 384 (448)
..++ .++|| +-+++..|..-..|||+. .++ -+-|..++.++.....+....| ...+.|+
T Consensus 297 Aa~~-v~sPPlr~d~~t~~~L~~lLa~g~L~~tgSdhctf~~~qKalgKddFt~ip~GvnGvedrMsviwekgv~~G~md 375 (522)
T KOG2584|consen 297 AAAF-VTSPPLRPDPTTPDGLMDLLAEGDLQLTGSDHCTFTTEQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMD 375 (522)
T ss_pred ccee-eeCCCCCCCCCCHHHHHHHHhcCccceeecCCCCCCHHHHhhccCccccCCCccccccccceeeeehhcccCccC
Confidence 1111 23333 456899999999999973 211 1234444444444332222233 2355678
Q ss_pred HHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC--Chhh--------h-----ccCeeeEEEECCEEecC
Q 013175 385 LTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--DFAA--------E-----VSASIEATYVSGVQAYP 448 (448)
Q Consensus 385 ~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~--~~~~--------~-----~~~~v~~t~~~G~~V~~ 448 (448)
.-+.+...+.|+|++|++..++|+|++|.+||+||||++... ..+. + .+..+.-||.+||+||.
T Consensus 376 ~~~fVavtstnaAkifnlYprKGrIavGsDADiVIwdp~at~tIS~~th~~~~d~NifEGm~~~G~plvtIsrGriv~e 454 (522)
T KOG2584|consen 376 ENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPNATKTISAKTHHSANDFNIFEGMTVHGVPLVTISRGRVVYE 454 (522)
T ss_pred cccEEEEecccchhheeccCcCceecccCCCcEEEECCCcceEeccccccccccceeecCcEecceeEEEEeCCeEEEe
Confidence 888888889999999999999999999999999999998543 1111 1 14678999999999983
No 75
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=99.82 E-value=1.9e-18 Score=164.90 Aligned_cols=277 Identities=19% Similarity=0.175 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHHhcCcceeEeCccC--CCCC-ccccchHHHHHHHHHHHhcCCCeeEEEEccCCc--chhhHHHHHHhcC
Q 013175 115 REALLRASNLALSRGVTTVVDFGRY--YPGE-SVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE--TWSSLADLINKTG 189 (448)
Q Consensus 115 ~~~~~~~~~~~~~~GvTtv~d~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~--~~~~~~~~~~~~~ 189 (448)
..++...-+++++.||||+.|.-.. ..++ ........+.+.+..+..++.+.++..++..++ ....+..+.....
T Consensus 27 ~~a~~~~d~~~~a~GiTT~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~hlR~E~~~~~~~~~~~~~~~ 106 (325)
T cd01306 27 DIALAAHDRQLAAAGITTVFDALSFGDEEGGRRRLRNLRKLIDAIRELHARGVLRADHRLHLRCELADPAVLPELESLMA 106 (325)
T ss_pred HHHHHHHHHHHHhcCcccceeeeEeccccCCcccHHHHHHHHHHHHHhhhCCcchhhcceEEEEeecCccHHHHHHHHhc
Confidence 3467777889999999999986432 1222 112233344445555443455544433333221 1112222222111
Q ss_pred CcCCCCeeeCceEEEecCCcCCCCccccCCcCCCC-CCCc----------------ccCCCHHHHHHHHHHHHHCCCcEE
Q 013175 190 HVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEP-HNYG----------------LQVMELESLLSMTMASDKSGLQVA 252 (448)
Q Consensus 190 ~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~-~~~g----------------~~~~~~~~l~~~~~~a~~~g~~v~ 252 (448)
++.+ .+-.|+|.+++.+.-.-.+.|.... ...| ...++.+.++++++.|+++|++++
T Consensus 107 ---~~~v---~lvs~~dH~pg~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~A~~~gl~va 180 (325)
T cd01306 107 ---DPRV---HLVSLMDHTPGQRQFRDLEKYREYYAKKYGLSDEEVEEAILERKARAAAYAPANRSELAALARARGIPLA 180 (325)
T ss_pred ---CCCc---CEEEEeCCCCccccccCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHCCCcEE
Confidence 1112 2335799998876321111121100 0011 123457889999999999999999
Q ss_pred EEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhh
Q 013175 253 IHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERES 332 (448)
Q Consensus 253 iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~ 332 (448)
+|+.... +.++.+.. .| -..++|. .+.+.+..+++.|+.+.+++..... |... ...
T Consensus 181 sH~d~~~------~~v~~a~~-~G----v~~~E~p--~t~e~a~~a~~~G~~vv~gapn~lr---------g~s~--~g~ 236 (325)
T cd01306 181 SHDDDTP------EHVAEAHE-LG----VVISEFP--TTLEAAKAARELGLQTLMGAPNVVR---------GGSH--SGN 236 (325)
T ss_pred EecCCCh------HHHHHHHH-CC----CeeccCC--CCHHHHHHHHHCCCEEEecCccccc---------Cccc--ccc
Confidence 9996432 11222222 13 2244553 5788999999999999876543211 1111 245
Q ss_pred hhHHHHHHcCCceeecCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCC
Q 013175 333 YLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPG 412 (448)
Q Consensus 333 ~~~~~~~~~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~G 412 (448)
.++++++++|+.++++||+. +.+++..+.... ...++++.++|+++|.|||+++|+++ +|+|++|
T Consensus 237 ~~~~~ll~~Gv~~al~SD~~--p~sll~~~~~la------------~~~gl~l~eAl~~aT~nPA~~lGl~d-~G~I~~G 301 (325)
T cd01306 237 VSARELAAHGLLDILSSDYV--PASLLHAAFRLA------------DLGGWSLPEAVALVSANPARAVGLTD-RGSIAPG 301 (325)
T ss_pred HhHHHHHHCCCeEEEEcCCC--cHhHHHHHHHHH------------HHcCCCHHHHHHHHhHHHHHHcCCCC-CCCcCCC
Confidence 67899999999999999984 233333332222 12358999999999999999999985 7999999
Q ss_pred CcccEEEecCCCCCChhhhccCeeeEEEECC
Q 013175 413 KIADFVILSTSSWEDFAAEVSASIEATYVSG 443 (448)
Q Consensus 413 k~ADlvvld~d~~~~~~~~~~~~v~~t~~~G 443 (448)
+.||||+++.+.- ...|..||++|
T Consensus 302 ~~ADlvvvd~~~~-------~p~v~~v~~~G 325 (325)
T cd01306 302 KRADLILVDDMDG-------VPVVRTVWRGG 325 (325)
T ss_pred CCCCEEEEeCCCC-------CCccceEEeCc
Confidence 9999999998631 22577888887
No 76
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=99.82 E-value=3.3e-18 Score=169.42 Aligned_cols=182 Identities=18% Similarity=0.205 Sum_probs=124.0
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCC-----------hhhHHHHHh
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA-----------SGTAARFGD 300 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~-----------~~~i~~~~~ 300 (448)
++++.+++.++.|+++|+++++|+.+.... ..+.+ +.......+.||...+ .+++..+++
T Consensus 170 ~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~--~~~~~-------~~l~~g~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (379)
T PRK12394 170 YGLKPLTETLRIANDLRCPVAVHSTHPVLP--MKELV-------SLLRRGDIIAHAFHGKGSTILTEEGAVLAEVRQARE 240 (379)
T ss_pred cchHHHHHHHHHHHHcCCCEEEEeCCCCcc--HHHHH-------HhcCCCCEEEecCCCCCCCcCCCCCCChHHHHHHHh
Confidence 457889999999999999999999653211 11111 1112244678886522 246777889
Q ss_pred CCcEE-eeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCC-ceeecCCCCCCC--CCHHHHHHHHHcCCCCCCCCC
Q 013175 301 QGIVA-SMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNA-LLALGSDWPVAD--INPLCAIRTAMKRIPPGWDNA 376 (448)
Q Consensus 301 ~gv~~-~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv-~v~~gSD~p~~~--~~p~~~~~~a~~r~~~~~~~~ 376 (448)
.|+.+ ..++.... .......++++|+ ++++|||.+.+. .+++..|...+.+.
T Consensus 241 ~G~~~~~~~g~s~~-----------------~~~~~~~~l~~G~~~~~lgTD~~~~~~~~~~~~~l~~~~~~~------- 296 (379)
T PRK12394 241 RGVIFDAANGRSHF-----------------DMNVARRAIANGFLPDIISSDLSTITKLAWPVYSLPWVLSKY------- 296 (379)
T ss_pred CCeEEEecCCcccc-----------------chHHHHHHHHCCCCceEEECCCCCCCcccCccchHHHHHHHH-------
Confidence 99876 44443210 0123457889995 899999986542 24444444433321
Q ss_pred CCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC-Chhhhc--------cCeeeEEEECCEEec
Q 013175 377 WIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEV--------SASIEATYVSGVQAY 447 (448)
Q Consensus 377 ~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~-~~~~~~--------~~~v~~t~~~G~~V~ 447 (448)
...+++++++++++|.|||+++|+++.+|+|++|+.|||+++|.+... ...+.. ...|..||++|++||
T Consensus 297 --~~~~~~~~~~~~~at~~~a~~~g~~~~~G~i~~G~~ADl~~~~~~~~~~~~~d~~g~~~~~~~~~~v~~t~v~G~~v~ 374 (379)
T PRK12394 297 --LALGMALEDVINACTHTPAVLMGMAAEIGTLAPGAFADIAIFKLKNRHVEFADIHGETLTGTHVLVPQMTIKSGEILY 374 (379)
T ss_pred --HHcCCCHHHHHHHHHHHHHHHhCCCCCCCccCCCCccCEEEEecCcCcceeccCCCCEEEeeeecceEEEEECCEEEE
Confidence 134689999999999999999999755899999999999999987544 222221 226899999999998
Q ss_pred C
Q 013175 448 P 448 (448)
Q Consensus 448 ~ 448 (448)
+
T Consensus 375 ~ 375 (379)
T PRK12394 375 R 375 (379)
T ss_pred e
Confidence 4
No 77
>PRK06846 putative deaminase; Validated
Probab=99.81 E-value=3.4e-18 Score=171.07 Aligned_cols=188 Identities=19% Similarity=0.128 Sum_probs=132.9
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecchH-HHHHHHHHHHHhHHhcCCCCCCCeEEecccC---ChhhH----HHHHhCCc
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGDR-ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL---ASGTA----ARFGDQGI 303 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd~-a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~---~~~~i----~~~~~~gv 303 (448)
.+++.++++++.|+++|+++++|..+.. .....++.+-+.....+..+ +..+.||... +++++ +++++.|+
T Consensus 203 ~~~~~l~~~~~lA~~~g~~v~~Hv~e~~~~~~~~~~~~~~~~~~~gl~~-~v~~~H~~~l~~~~~~e~~~li~~la~~g~ 281 (410)
T PRK06846 203 AIEKSLDTMFQIAVDFNKGVDIHLHDTGPLGVATIKYLVETTEEAQWKG-KVTISHAFALGDLNEEEVEELAERLAAQGI 281 (410)
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEECCCCChhHHHHHHHHHHHHHhCCCC-CEEEEecchhhcCCHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999986422 11122222222233346555 8999999864 55554 47999999
Q ss_pred EEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCC------CCCHHHHHHHHHcCCCCCCCCCC
Q 013175 304 VASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA------DINPLCAIRTAMKRIPPGWDNAW 377 (448)
Q Consensus 304 ~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~------~~~p~~~~~~a~~r~~~~~~~~~ 377 (448)
.++.++. ++ ...+|+++++++|+++++|||++.. ..|++..+..+..+.. +
T Consensus 282 ~v~~~~~------------~~-----~g~~p~~~l~~~Gv~v~lGtD~~~~~~~p~~~~d~~~~~~~~~~~~~------~ 338 (410)
T PRK06846 282 SITSTVP------------IG-----RLHMPIPLLHDKGVKVSLGTDSVIDHWSPFGTGDMLEKANLLAELYR------W 338 (410)
T ss_pred eEEEeCC------------CC-----CCCCCHHHHHhCCCeEEEecCCCCCCCcCCCCCCHHHHHHHHHHHhc------C
Confidence 8876432 12 3468999999999999999997642 2457877766553321 1
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhh-ccCeeeEEEECCEEecC
Q 013175 378 IPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAE-VSASIEATYVSGVQAYP 448 (448)
Q Consensus 378 ~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~-~~~~v~~t~~~G~~V~~ 448 (448)
.+.+ .+.++|+++|.++ ..+++++.+|+|+|||.|||||+|.+... +.+ ...+|..||++|++||.
T Consensus 339 ~~~~--~~~~~l~~~T~~a-~~l~~~~~~G~l~~G~~ADlvlld~~~~~--~~~~~~~~v~~v~~~G~~v~~ 405 (410)
T PRK06846 339 SDER--SLSRSLALATGGV-LPLNDEGERVWPKVGDEASFVLVDASCSA--EAVARQSPRTAVFHKGQLVAG 405 (410)
T ss_pred CCHH--HHHHHHHHHcCCc-cccccCCCccCCCCCCcccEEEEeCCChH--HHHHhcCCceEEEECCEEEee
Confidence 2222 4568999999985 45777777899999999999999986522 223 23579999999999983
No 78
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.
Probab=99.80 E-value=4.1e-18 Score=170.80 Aligned_cols=252 Identities=19% Similarity=0.213 Sum_probs=154.4
Q ss_pred HHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCc----ch----h--hHHHHHHhcCCc
Q 013175 122 SNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE----TW----S--SLADLINKTGHV 191 (448)
Q Consensus 122 ~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~----~~----~--~~~~~~~~~~~~ 191 (448)
.+.++++|||||.+++...++......+ +.+.+ ...+.++++++..+.. .. . ...++.....
T Consensus 29 ~~~a~~~GvTtvv~~p~~~~~v~g~~~~----~~~~~--~a~~~p~~~~~~~p~~vp~t~~e~~g~~~~~~~i~~l~~-- 100 (422)
T cd01295 29 AKAVLPHGTTTVIADPHEIANVAGVDGI----EFMLE--DAKKTPLDIFWMLPSCVPATPFETSGAELTAEDIKELLE-- 100 (422)
T ss_pred HHHHHCCCcEEEEeCCCCCCcCCCHHHH----HHHHH--HHhCCCceEEEeCCCcCCCCCCCCCCCcCCHHHHHHHhc--
Confidence 5688999999999986543333322222 22222 2356688886654321 00 0 1222221111
Q ss_pred CCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHh
Q 013175 192 LSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSV 271 (448)
Q Consensus 192 ~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~ 271 (448)
+-.+.++|.++|- | +. ..+++.+.+.++.+++.|+++.+|+.++.+ ..+.++.+.
T Consensus 101 ---~~~vvglgE~md~-----------~--------~v-~~~~~~l~~~i~~A~~~g~~v~~Ha~g~~~--~~L~a~l~a 155 (422)
T cd01295 101 ---HPEVVGLGEVMDF-----------P--------GV-IEGDDEMLAKIQAAKKAGKPVDGHAPGLSG--EELNAYMAA 155 (422)
T ss_pred ---CCCCcEEEEeccC-----------c--------cc-cCCcHHHHHHHHHHHhCCCEEEEeCCCCCH--HHHHHHHHc
Confidence 1134556654421 1 11 124568999999999999999999998763 334444332
Q ss_pred HHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCC
Q 013175 272 VVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDW 351 (448)
Q Consensus 272 ~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~ 351 (448)
+. ...|++...++.++++ ++|+.++++|.+...+.... ...+.+ +.+.+++++||+
T Consensus 156 ----Gi-----~~dH~~~~~eea~e~l-~~G~~i~i~~g~~~~~~~~~------------~~~l~~--~~~~~i~l~TD~ 211 (422)
T cd01295 156 ----GI-----STDHEAMTGEEALEKL-RLGMYVMLREGSIAKNLEAL------------LPAITE--KNFRRFMFCTDD 211 (422)
T ss_pred ----CC-----CCCcCCCcHHHHHHHH-HCCCEEEEECcccHhhHHHH------------HHhhhh--ccCCeEEEEcCC
Confidence 21 2258777777777776 78999999987642211111 011111 268999999998
Q ss_pred CCCCCCHH-HHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhh
Q 013175 352 PVADINPL-CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAA 430 (448)
Q Consensus 352 p~~~~~p~-~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~ 430 (448)
|. +.++. .+....+.+.. ...+++++++++++|.|||+++|+ +.+|+|+||+.|||+|++.
T Consensus 212 ~~-~~~~~~~g~~~~v~r~a--------~~~g~s~~eal~~aT~n~A~~~gl-~~~G~i~~G~~AD~vv~~~-------- 273 (422)
T cd01295 212 VH-PDDLLSEGHLDYIVRRA--------IEAGIPPEDAIQMATINPAECYGL-HDLGAIAPGRIADIVILDD-------- 273 (422)
T ss_pred CC-chhhhhcchHHHHHHHH--------HHcCCCHHHHHHHHhHHHHHHcCC-CCCcccCCCCcCCEEEECC--------
Confidence 62 22221 12112222211 134689999999999999999999 4589999999999999973
Q ss_pred hccCeeeEEEECCEEecC
Q 013175 431 EVSASIEATYVSGVQAYP 448 (448)
Q Consensus 431 ~~~~~v~~t~~~G~~V~~ 448 (448)
+...+|..||++|++||+
T Consensus 274 ~~~~~v~~v~~~G~~v~~ 291 (422)
T cd01295 274 LENFNITTVLAKGIAVVE 291 (422)
T ss_pred CCCCceEEEEECCeEEEE
Confidence 123468999999999873
No 79
>PRK13985 ureB urease subunit beta; Provisional
Probab=99.80 E-value=8.9e-18 Score=166.90 Aligned_cols=199 Identities=16% Similarity=0.112 Sum_probs=124.4
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecch---HHHHHHHHHHHHhHHhcCCCCCCCeEEecccCC---hhhHHHHH-hCCcE
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGD---RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA---SGTAARFG-DQGIV 304 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd---~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~---~~~i~~~~-~~gv~ 304 (448)
.++..+.++++.|.++|.++.+|+..- .-++..+.++ .+...|+.|..... ..+|-+++ ..+|-
T Consensus 225 ~t~~~I~~aL~vA~~~dv~V~iHtdtlne~g~~E~t~aa~---------~gr~iH~~H~egaggghapdi~~~~~~~nvl 295 (568)
T PRK13985 225 TTPSAINHALDVADKYDVQVAIHTDTLNEAGCVEDTMAAI---------AGRTMHTFHTEGAGGGHAPDIIKVAGEHNIL 295 (568)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeCCCCCCchhhHHHHHHh---------cCCeEEEEeccCCCccchhhHHHHcCCCCcc
Confidence 467889999999999999999999532 2223333332 24567888877553 24444444 34443
Q ss_pred E-eeccccccC--chhHH----------HH------hcCHhhhh-hhhhhHHHHHHcCCceeecCCCCCCC------CCH
Q 013175 305 A-SMQPQHLLD--DADSA----------RK------KLGVDRAE-RESYLFQSLLANNALLALGSDWPVAD------INP 358 (448)
Q Consensus 305 ~-~~~P~~~~~--~~~~~----------~~------~~g~~r~~-~~~~~~~~~~~~Gv~v~~gSD~p~~~------~~p 358 (448)
. |+.|+--+. ..+.. .. .+...|.. .....=.-|.+.|+...++||+.... ...
T Consensus 296 p~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~ed~afa~srir~~tiaaed~l~d~G~~s~~~SDs~~mgr~ge~~~r~ 375 (568)
T PRK13985 296 PASTNPTIPFTVNTEAEHMDMLMVCHHLDKSIKEDVQFADSRIRPQTIAAEDTLHDMGIFSITSSDSQAMGRVGEVITRT 375 (568)
T ss_pred cCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccccccccCchhhhCCcEEEEeccchhhCcccceeeeh
Confidence 3 444442110 00000 00 01111110 11111123789999999999986221 235
Q ss_pred HHHHHHHHc-CCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCeee
Q 013175 359 LCAIRTAMK-RIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIE 437 (448)
Q Consensus 359 ~~~~~~a~~-r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v~ 437 (448)
|.....+.. |...... -.....++++++|+++|+|||+++|+++++|+|++||.|||||||.+++. .++.
T Consensus 376 ~q~a~k~~~~~g~l~~~--~~~~dnl~v~eAL~~yTin~A~A~G~e~~vGSLe~GK~ADlVv~d~d~f~-------~~pe 446 (568)
T PRK13985 376 WQTADKNKKEFGRLKEE--KGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFG-------VKPN 446 (568)
T ss_pred HHHHHHHHHhcCCCCCc--cccccccCHHHHHHHHhHHHHHHcCcccCceeECCCCccCEEEEcCccCC-------CChh
Confidence 555544443 2211111 01234589999999999999999999999999999999999999999876 2467
Q ss_pred EEEECCEEecC
Q 013175 438 ATYVSGVQAYP 448 (448)
Q Consensus 438 ~t~~~G~~V~~ 448 (448)
.||++|+++|.
T Consensus 447 ~vi~~G~iv~~ 457 (568)
T PRK13985 447 MIIKGGFIALS 457 (568)
T ss_pred eEEECCEEEEc
Confidence 99999999984
No 80
>PRK06886 hypothetical protein; Validated
Probab=99.78 E-value=4.1e-17 Score=156.16 Aligned_cols=268 Identities=13% Similarity=0.108 Sum_probs=177.4
Q ss_pred CCchhHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEE
Q 013175 90 PTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRV 169 (448)
Q Consensus 90 ~tG~l~e~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv 169 (448)
.+|.|.|. +..+....+.++.+++++....+++.++++|+|.|+.+-...|. .....|+...++.++. ++.+.+++
T Consensus 44 ~~g~l~e~-i~~~~~~k~~~t~~dv~~Ra~~~l~~~~~~Gtt~iRtHvdvd~~-~~l~~~~a~~~~r~~~--~~~idlq~ 119 (329)
T PRK06886 44 HYANLQQK-WDLVDEVKRNSTVEDYYARFSQAIELMISQGVTAFGTFVDIDPI-CEDRAIIAAHKAREVY--KHDIILKF 119 (329)
T ss_pred CCCCHHHH-HHHHHHHhccCCHHHHHHHHHHHHHHHHHcCcccEeeeeccCCC-ccccHHHHHHHHHHHh--cCcceEEE
Confidence 46888886 45555666788999999999999999999999999976533221 1233455444444333 56788888
Q ss_pred EEccCCcch--hhHHHHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHC
Q 013175 170 CLFFPLETW--SSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKS 247 (448)
Q Consensus 170 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~ 247 (448)
+.+.+ .++ ....++... +++. +| .+|+. ||.+.. ....+.+.++.+++.|.++
T Consensus 120 vafPq-~g~~~~~~~~l~~~------------al~~-ad-vvGGi------P~~~~~----~~~~~~e~l~~~~~lA~~~ 174 (329)
T PRK06886 120 ANQTL-KGVIEPTAKKWFDI------------GSEM-VD-MIGGL------PYRDEL----DYGRGLEAMDILLDTAKSL 174 (329)
T ss_pred EecCh-hhccCccHHHHHHH------------HHHh-CC-EEeCc------cCCcCC----CCCCCHHHHHHHHHHHHHc
Confidence 76532 111 011122111 1111 11 11111 554311 1124688999999999999
Q ss_pred CCcEEEEecchH-HHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhh-------HHHHHhCCcEEeeccccccC-chhH
Q 013175 248 GLQVAIHAIGDR-ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGT-------AARFGDQGIVASMQPQHLLD-DADS 318 (448)
Q Consensus 248 g~~v~iHa~gd~-a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~-------i~~~~~~gv~~~~~P~~~~~-~~~~ 318 (448)
|++|.+|+.+.. .....++.+.+.....|..+ ++.+.||..++..+ ++++++.|+.+++||..... ...
T Consensus 175 g~~Id~Hlde~~~~~~~~le~l~~~~~~~Gl~g-rV~~sH~~~L~~~~~~~~~~~i~~La~agi~Vv~~P~snl~l~~~- 252 (329)
T PRK06886 175 GKMVHVHVDQFNTPKEKETEQLCDKTIEHGMQG-RVVAIHGISIGAHSKEYRYRLYQKMREADMMVIACPMAWIDSNRK- 252 (329)
T ss_pred CCCeEEeECCCCchhHHHHHHHHHHHHHcCCCC-CEEEEEeccccCcChhhHHHHHHHHHHcCCeEEECchhhhhhccc-
Confidence 999999997532 22334444444344557654 89999999988764 99999999999999986221 100
Q ss_pred HHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCC------CCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHH
Q 013175 319 ARKKLGVDRAERESYLFQSLLANNALLALGSDWP------VADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAH 392 (448)
Q Consensus 319 ~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p------~~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~ 392 (448)
.... +.+ ++.+|+++|+++||+|++|||.. ....|+|..+..+..... ..++.++|+++
T Consensus 253 -~~~~-p~~--rGv~pv~eL~~aGV~V~lGtDnv~D~~~p~g~~Dmle~~~l~~~~~~-----------~~~~~~~l~ma 317 (329)
T PRK06886 253 -EDLM-PFH--NALTPADEMIPEGITVALGTDNICDYMVPLCEGDMWQELSLLAAGCR-----------FYDLDEMVNIA 317 (329)
T ss_pred -cccC-cCC--CCCCCHHHHHHCCCeEEEecCCCcccCCCCCCCCHHHHHHHHHHHcC-----------CCCHHHHHHHH
Confidence 0001 111 56789999999999999999964 345688988887765432 13689999999
Q ss_pred hHHHHHHcccC
Q 013175 393 TLSAARACFLE 403 (448)
Q Consensus 393 T~n~A~~~g~~ 403 (448)
|.|+|+++|++
T Consensus 318 T~~gAraLgl~ 328 (329)
T PRK06886 318 SINGRKVLGLE 328 (329)
T ss_pred hhhHHHHhCCC
Confidence 99999999975
No 81
>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.
Probab=99.77 E-value=1.1e-16 Score=155.11 Aligned_cols=274 Identities=14% Similarity=0.162 Sum_probs=159.8
Q ss_pred HHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcchh--hHHHHHHhcCC
Q 013175 113 ERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWS--SLADLINKTGH 190 (448)
Q Consensus 113 ~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~~--~~~~~~~~~~~ 190 (448)
+.++.+.+++++|+++|||||.||+++.|...+. +.++...+. .++...+++.++....... .+.++..
T Consensus 21 ~~~ed~~sgs~AAa~GGvTtv~dmPnt~P~~~~~----~~~~~~~~~-a~~~s~vd~~~~~~~~~~~~~~~~~l~~---- 91 (344)
T cd01316 21 THKEDFASGTKAALAGGFTMVRAMPNTNPSIVDV----ASLKLVQSL-AQAKARCDYAFSIGATSTNAATVGELAS---- 91 (344)
T ss_pred CCcChHHHHHHHHHhCCCeEEEECCCCCCCCCCH----HHHHHHHHH-hccCcEEeEEEEeeecCCCHHHHHHHHh----
Confidence 3578999999999999999999998765544322 222222222 2344568887764432211 1222211
Q ss_pred cCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHH
Q 013175 191 VLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKS 270 (448)
Q Consensus 191 ~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~ 270 (448)
. +.|+|+|...... ... .++.........++..+.++.+|++.. .+...+...+
T Consensus 92 -----~-~~g~k~f~~~~~~-----------------~~~-~~~~~~~~~~~~~~~~~~p~~~~~e~~-~~~~~l~la~- 145 (344)
T cd01316 92 -----E-AVGLKFYLNETFS-----------------TLI-LDKITAWASHFNAWPSTKPIVTHAKSQ-TLAAVLLLAS- 145 (344)
T ss_pred -----c-cCeEEEEECCCCC-----------------CCc-cchHHHHHHHHHhcccCCCeEEehhhH-HHHHHHHHHH-
Confidence 1 3678998743110 000 111112233445556688999999643 2222222221
Q ss_pred hHHhcCCCCCCCeEEecccCCh-hhHHHHHhCC--cEEeeccccccCchhHHHHhcCHhhhhhhhhhHHH---------H
Q 013175 271 VVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARKKLGVDRAERESYLFQS---------L 338 (448)
Q Consensus 271 ~~~~~~~~~~r~~i~H~~~~~~-~~i~~~~~~g--v~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~---------~ 338 (448)
. .+.+.+|+|++.... +.+.+.++.| |++++||+|++++.+.+.. ..+ +.+||+|+ .
T Consensus 146 ---~---~g~~lhi~HiSt~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~----~~~-k~~PPLR~~~dr~aL~~~ 214 (344)
T cd01316 146 ---L---HNRSIHICHVSSKEEINLIRLAKARGLKVTCEVSPHHLFLSQDDLPR----GQY-EVRPFLPTREDQEALWEN 214 (344)
T ss_pred ---H---HCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEechHHeeccHHHhhc----CCc-eeCCCCcCHHHHHHHHHH
Confidence 1 356899999886543 4444455555 8899999999987765432 122 55666653 2
Q ss_pred HHcCCceeecCCCC-CCCC--------CHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccc
Q 013175 339 LANNALLALGSDWP-VADI--------NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSL 409 (448)
Q Consensus 339 ~~~Gv~v~~gSD~p-~~~~--------~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi 409 (448)
+ +...+++||+. .... ..+.++...+... .....+.++++.+++++++.|||+++|+..
T Consensus 215 l--~~id~i~SDHaP~~~~~K~~~~a~~G~~g~e~~lpl~-----~~~v~~~~i~l~~l~~~~s~nPAk~~gl~~----- 282 (344)
T cd01316 215 L--DYIDCFATDHAPHTLAEKTGNKPPPGFPGVETSLPLL-----LTAVHEGRLTIEDIVDRLHTNPKRIFNLPP----- 282 (344)
T ss_pred H--hcCCEEEcCCCCCCHHHhcCCCCCCCcccHHHHHHHH-----HHHHHcCCCCHHHHHHHHHHhHHHHhCCCC-----
Confidence 3 34779999963 2210 0111111111100 001134579999999999999999999864
Q ss_pred cCCCcccEEEecCCC-CC-Chhhh-------------ccCeeeEEEECCEEec
Q 013175 410 SPGKIADFVILSTSS-WE-DFAAE-------------VSASIEATYVSGVQAY 447 (448)
Q Consensus 410 ~~Gk~ADlvvld~d~-~~-~~~~~-------------~~~~v~~t~~~G~~V~ 447 (448)
+ .+||||+|.+. ++ ..+.+ ...+|..||++|++||
T Consensus 283 --~-~~~lvi~d~~~~~~v~~~~~~s~~~~sp~~G~~l~G~v~~ti~rG~~v~ 332 (344)
T cd01316 283 --Q-SDTYVEVDLDEEWTIPKNPLQSKKGWTPFEGKKVKGKVQRVVLRGETAF 332 (344)
T ss_pred --C-CCCEEEEeCCCcEEEChhhccccCCCCCCCCCEEeeEEEEEEECCEEEE
Confidence 2 33799999763 33 22222 1468999999999997
No 82
>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.
Probab=99.76 E-value=1.7e-16 Score=158.39 Aligned_cols=196 Identities=17% Similarity=0.170 Sum_probs=118.9
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecc---hHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCCh---hhHHHH-HhCCcEE
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIG---DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS---GTAARF-GDQGIVA 305 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~g---d~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~---~~i~~~-~~~gv~~ 305 (448)
++..+.++++.|.++|.++.+|+.. ..-++..+.++ .+...|+.|.....- .++-++ ...+|-+
T Consensus 226 t~~~i~~aL~~A~~~dv~VaiHadtlne~g~~E~t~aa~---------~gr~iH~~H~egaggghapdi~~~~~~~nvlp 296 (567)
T cd00375 226 TPAAIDTCLSVADEYDVQVAIHTDTLNESGFVEDTIAAI---------KGRTIHTYHTEGAGGGHAPDIIKVAGHPNVLP 296 (567)
T ss_pred CHHHHHHHHHHHHhhCCEEEEECCCCCcchHHHHHHHHh---------cCCeEEEEecCCCCcccchHHHHhcCCCCccc
Confidence 6788999999999999999999963 22233223222 345678888775542 333344 3444443
Q ss_pred -eeccccccC--chhHH----------HH------hcCHhhhh-hhhhhHHHHHHcCCceeecCCCCCC------CCCHH
Q 013175 306 -SMQPQHLLD--DADSA----------RK------KLGVDRAE-RESYLFQSLLANNALLALGSDWPVA------DINPL 359 (448)
Q Consensus 306 -~~~P~~~~~--~~~~~----------~~------~~g~~r~~-~~~~~~~~~~~~Gv~v~~gSD~p~~------~~~p~ 359 (448)
|+.|+--+. ..+.. .. .+...|.. .....=.-|.+.|+...++||+... -...|
T Consensus 297 ~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~~d~~fa~srir~~ti~ae~~l~d~G~~s~~~sDs~~mgr~ge~~~r~~ 376 (567)
T cd00375 297 SSTNPTRPFTVNTLDEHLDMLMVCHHLDPNIPEDVAFAESRIRAETIAAEDVLHDLGAISIMSSDSQAMGRVGEVILRTW 376 (567)
T ss_pred CCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccchhhccchhhhccCcEEEEccchhhcCccceeeechH
Confidence 344442110 00000 00 01111110 1111222378899999999998621 12344
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCCCCHHHH---HHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCee
Q 013175 360 CAIRTAMKRIPPGWDNAWIPSERISLTDA---LIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASI 436 (448)
Q Consensus 360 ~~~~~a~~r~~~~~~~~~~~~~~ls~~~a---l~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v 436 (448)
.....+....... . ......+..++ |+++|+|||+++|+++++|+|++||.||||||+.+++. .++
T Consensus 377 q~a~k~~~~~g~~--~--~~~~~~~n~r~~~~L~~~Tin~A~alG~~~~vGSLe~GK~ADlVv~d~~~f~-------~~p 445 (567)
T cd00375 377 QTAHKMKAQRGPL--P--EDSGDADNFRVKRYIAKYTINPAIAHGISHEVGSVEVGKLADLVLWEPAFFG-------VKP 445 (567)
T ss_pred HHHHHHHHhcCCC--C--cccccCchHHHHHHHHHhhHHHHHHcCcccCceeeCCCCccCEEEEcCcccC-------CCe
Confidence 4444443311110 0 01123455444 99999999999999999999999999999999998764 357
Q ss_pred eEEEECCEEecC
Q 013175 437 EATYVSGVQAYP 448 (448)
Q Consensus 437 ~~t~~~G~~V~~ 448 (448)
..||++|++||.
T Consensus 446 ~~vi~~G~iv~~ 457 (567)
T cd00375 446 EMVLKGGFIAYA 457 (567)
T ss_pred eEEEECCEEEEe
Confidence 899999999984
No 83
>TIGR01792 urease_alph urease, alpha subunit. This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor.
Probab=99.74 E-value=7.4e-17 Score=162.46 Aligned_cols=194 Identities=16% Similarity=0.141 Sum_probs=119.5
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecchHH---HHHHHHHHHHhHHhcCCCCCCCeEEecccCC---hhhHHHH-HhCCcE
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGDRA---NDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA---SGTAARF-GDQGIV 304 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd~a---~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~---~~~i~~~-~~~gv~ 304 (448)
.+++.|+++++.|+++|+++++|+..... ++..++++ + +...++.|...+. ..++-++ ...+|-
T Consensus 224 ~s~e~L~~al~~A~e~gv~V~iH~ET~~E~g~ve~t~~a~-------g--~rpIh~~H~~G~g~ghapdi~~~~~~~~~~ 294 (567)
T TIGR01792 224 ATPAAIDNALSVADEYDVQVAVHTDTLNESGFVEDTIAAF-------K--GRTIHTYHTEGAGGGHAPDIIVVVGYNNIL 294 (567)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeCCCcccchHHHHHHHHH-------C--CCcchhHhhcCCCCCcHHHHHHHcCCCCcc
Confidence 57899999999999999999999954333 33333322 2 2344555544332 2333333 334443
Q ss_pred E-eecccccc-------------------Cc----hhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCC------
Q 013175 305 A-SMQPQHLL-------------------DD----ADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA------ 354 (448)
Q Consensus 305 ~-~~~P~~~~-------------------~~----~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~------ 354 (448)
+ |+.|+.-+ .+ -...+.++-+ .....=..|.+.|+...++||++..
T Consensus 295 ~~st~pt~p~~~~~~~e~~~m~~~~h~l~~~~~~d~~~a~~r~r~----~t~~ae~~l~d~G~~~~~~sDs~~mgr~~~~ 370 (567)
T TIGR01792 295 PSSTNPTLPYTVNTIDEHLDMLMVCHHLNPKIPEDVAFAESRIRK----ETIAAEDVLQDMGAISMISSDSQAMGRIGEV 370 (567)
T ss_pred cCCCCCCCCCccCchhhhcCeEEEeccCCCCCcccchhhhhhccc----eeccccchhhhCCcEEEecCCchhhCcccce
Confidence 3 34443111 10 0011112211 1122223488999999999998621
Q ss_pred CCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhcc
Q 013175 355 DINPLCAIRTAMK-RIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVS 433 (448)
Q Consensus 355 ~~~p~~~~~~a~~-r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~ 433 (448)
-...|.....+.. |........+.++++++++ |+++|.|||+++|+++++|+|++||.||||||+.+++..
T Consensus 371 ~~r~~q~a~k~~~~~g~~~~~~~~~~~~rl~r~--L~~yT~n~A~a~g~~~~~GsLe~Gk~ADlVv~~~d~f~~------ 442 (567)
T TIGR01792 371 VTRCWQTADKMKKQRGPLPGDSPGNDNNRVKRY--VAKYTINPAITHGISDYIGSIEVGKLADLVLWEPAFFGV------ 442 (567)
T ss_pred eechHHHHHHHHHhcCCCcccccCChhhhHHHH--HHHHhHHHHHHcCcccCceeeCCCCccCEEEEcCcccCC------
Confidence 1223433333322 2111111224456778877 999999999999999999999999999999999998762
Q ss_pred CeeeEEEECCEEec
Q 013175 434 ASIEATYVSGVQAY 447 (448)
Q Consensus 434 ~~v~~t~~~G~~V~ 447 (448)
++..|+++|+++|
T Consensus 443 -~p~~v~~~G~i~~ 455 (567)
T TIGR01792 443 -KPDMVLKGGLIAW 455 (567)
T ss_pred -ChheEEECCEEEE
Confidence 3568999999987
No 84
>PRK09061 D-glutamate deacylase; Validated
Probab=99.73 E-value=3.5e-16 Score=159.77 Aligned_cols=215 Identities=17% Similarity=0.209 Sum_probs=129.3
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecchHH--HHHHHHHHHHhHHhcCCCCCCCeEEecccCCh-------hhHHHHHhCC
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGDRA--NDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-------GTAARFGDQG 302 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd~a--~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~-------~~i~~~~~~g 302 (448)
.+.++|.++++.|.++|.++.+|+..... ....+.+++++.......+.+.+|.|++.... +.++++++.|
T Consensus 196 ~~~~eL~~l~~~A~~~g~~v~~H~e~~~~~~~~~e~~av~~~i~lA~~~G~rv~IsHlss~g~~~~~~~le~I~~Ar~~G 275 (509)
T PRK09061 196 TGHKEYLELARLAARAGVPTYTHVRYLSNVDPRSSVDAYQELIAAAAETGAHMHICHVNSTSLRDIDRCLALVEKAQAQG 275 (509)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEecCcccCCchhHHHHHHHHHHHHHHhCCCEEEEeeccCCcccHHHHHHHHHHHHHcC
Confidence 47889999999999999999999986421 11122333333332233456899999987432 4566667766
Q ss_pred --cEEeecccc--------ccCchhHHHH--------hc---CHhh-h-------------------------hhhhhhH
Q 013175 303 --IVASMQPQH--------LLDDADSARK--------KL---GVDR-A-------------------------ERESYLF 335 (448)
Q Consensus 303 --v~~~~~P~~--------~~~~~~~~~~--------~~---g~~r-~-------------------------~~~~~~~ 335 (448)
|++++||++ +.++.++... .+ |+.- . ......+
T Consensus 276 i~Vt~e~~P~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 355 (509)
T PRK09061 276 LDVTTEAYPYGAGSTVVGAAFFDPGWLERMGLGYGSLQWVETGERLLTREELAKLRANDPGGLVLIHFLDEDNPRDRALL 355 (509)
T ss_pred CcEEEEecCcchhhhhhcccccCHHHHHHhCCCHHHheehhcccccCCHHHHHHHhccCCCCeEEEEeccCCCCccchhH
Confidence 667899998 4443322211 11 1100 0 0001224
Q ss_pred HHHHHcCCceeecCCC-CCC---CCCHHHHHHHHHcCCC-C----C-CCC---CCCCC-CCCCHHHHHHHHhHHHHHHcc
Q 013175 336 QSLLANNALLALGSDW-PVA---DINPLCAIRTAMKRIP-P----G-WDN---AWIPS-ERISLTDALIAHTLSAARACF 401 (448)
Q Consensus 336 ~~~~~~Gv~v~~gSD~-p~~---~~~p~~~~~~a~~r~~-~----~-~~~---~~~~~-~~ls~~~al~~~T~n~A~~~g 401 (448)
...+..+.. +++||+ |.. ..++|...+..+.... . + ... .+..+ ..+|++++++++|.+||+++|
T Consensus 356 ~~~l~~p~~-~i~sD~~p~~~~~~~~~~~~~~~~~~~~~~h~r~~~~~~~~l~~~v~~~~~isl~~ai~~~T~~pA~~lg 434 (509)
T PRK09061 356 DRSVLFPGA-AIASDAMPWTWSDGTVYEGDAWPLPEDAVSHPRSAGTFARFLREYVRERKALSLLEAIRKCTLMPAQILE 434 (509)
T ss_pred HHHhCCCCc-eEecCCccccccccccccccccccccCCCCCchhhcchHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhc
Confidence 446666766 999996 211 0111111111111000 0 0 000 01122 359999999999999999999
Q ss_pred -----cCCCcccccCCCcccEEEecCCCCCChhhhc-----cCeeeEEEECCEEecC
Q 013175 402 -----LENDVGSLSPGKIADFVILSTSSWEDFAAEV-----SASIEATYVSGVQAYP 448 (448)
Q Consensus 402 -----~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~-----~~~v~~t~~~G~~V~~ 448 (448)
+.+ +|+|++|+.|||||+|.+...+...+. ...|..||++|++||+
T Consensus 435 ~~~~~l~~-~G~i~~G~~ADlvv~D~~~~~~~~~~~~~~~~~~gi~~v~v~G~~v~~ 490 (509)
T PRK09061 435 DSVPAMRR-KGRLQAGADADIVVFDPETITDRATFEDPNRPSEGVRHVLVNGVPVVS 490 (509)
T ss_pred cccccccC-CEeeCCCCCcCEEEEchhhccccccccccCCCCCCceEEEECCEEEEE
Confidence 765 699999999999999988644322221 1248899999999873
No 85
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.
Probab=99.73 E-value=2.4e-16 Score=153.48 Aligned_cols=257 Identities=15% Similarity=0.097 Sum_probs=149.3
Q ss_pred HHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCC-eeEEEEccCC--c---chhhHHHHHHhcC
Q 013175 116 EALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKM-KIRVCLFFPL--E---TWSSLADLINKTG 189 (448)
Q Consensus 116 ~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~irv~~~~~~--~---~~~~~~~~~~~~~ 189 (448)
+.+..++++|.++| |++.||+++.|..... ....+....+. ... ++|+..++.. . ...++.++.+.
T Consensus 17 ~~~~~~~~aa~~gG-Ttvv~mpnt~P~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~el~~~~~~-- 88 (335)
T cd01294 17 AMLKLVLPYTARGF-SRAIVMPNLKPPVTTT---ADALAYRERIL--AADPGPNFTPLMTLYLTENTTPEELREAKKK-- 88 (335)
T ss_pred hHHHHHHHHHHhCC-CEEEECCCCCCCCCCH---HHHHHHHHHHH--hcCCCCcEEEEEEEeccCCCCHHHHHHHHHh--
Confidence 57788899999999 9999998765544321 11122222222 223 4566543322 1 11223333211
Q ss_pred CcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHH-------
Q 013175 190 HVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRAND------- 262 (448)
Q Consensus 190 ~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~------- 262 (448)
..+.|+|+|..+... + .+....+.+.+.++++.+.+.|++|.+||+......
T Consensus 89 ------~G~~g~Klf~~~~~~--------~-------~~~~~~d~~~l~~~~e~~~~~g~~V~vHaE~~~l~~~~~~~e~ 147 (335)
T cd01294 89 ------GGIRGVKLYPAGATT--------N-------SQGGVTDLEKIYPVLEAMQKLGMPLLVHGEVPDFKIDVLDREA 147 (335)
T ss_pred ------CCceEEEEecCCCcc--------C-------CCCCcCCHHHHHHHHHHHHHcCCeEEEecCCCcccccchhhHH
Confidence 136789998643110 0 011123457899999999999999999997643200
Q ss_pred HHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhC--CcEEeeccccccCchhHHHHh-cCHhhhhhhhhhHH---
Q 013175 263 LVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQ--GIVASMQPQHLLDDADSARKK-LGVDRAERESYLFQ--- 336 (448)
Q Consensus 263 ~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~--gv~~~~~P~~~~~~~~~~~~~-~g~~r~~~~~~~~~--- 336 (448)
..+..+..+.... .+.+.+|.|++. .+.++.+++. .|++++||+|+.++.+.+... +|. +. +.+||+|
T Consensus 148 ~~~~~~~~lA~~~--p~~~v~i~Hvst--~~~~~~i~~ak~~vt~Et~ph~L~l~~~~~~~~~~g~-~~-k~~PPlR~~~ 221 (335)
T cd01294 148 KFIPVLEPLAQRF--PKLKIVLEHITT--ADAVEYVKSCNENVAATITPHHLLLTRDDLLGGGLNP-HL-YCKPVAKRPE 221 (335)
T ss_pred HHHHHHHHHHHHc--CCCeEEEecccH--HHHHHHHHhCCCCcEEEEchhHheeeHHHhcCCCCCC-Ce-EEcCCCCCHH
Confidence 1111122222221 357899999874 4555555433 699999999999887654321 232 23 5566665
Q ss_pred ------HHHHcCCce-eecCCC-CCCCCC---H-----HHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 013175 337 ------SLLANNALL-ALGSDW-PVADIN---P-----LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARAC 400 (448)
Q Consensus 337 ------~~~~~Gv~v-~~gSD~-p~~~~~---p-----~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~ 400 (448)
+.+..|.+. .++||+ |.+... | +..+...+... .... .++||+++++++++.|||++|
T Consensus 222 d~~~L~~~l~~G~id~~i~SDHaP~~~~~K~~~~g~~Gi~~~~~~l~~~-----~~~~-~~~l~l~~~v~~~s~nPA~i~ 295 (335)
T cd01294 222 DREALRKAATSGHPKFFLGSDSAPHPKSNKESSCGCAGIFSAPIALPYL-----AEVF-EEHNALDKLEAFASDNGPNFY 295 (335)
T ss_pred HHHHHHHHHHcCCCCeEEECCCCCCCCccccCCCCCccccCHHHHHHHH-----HHHH-hccCCHHHHHHHHHhHHHHHh
Confidence 466789999 599997 332100 0 11111011000 0001 237999999999999999999
Q ss_pred ccCCCcccccCCC
Q 013175 401 FLENDVGSLSPGK 413 (448)
Q Consensus 401 g~~~~~Gsi~~Gk 413 (448)
|+..++|+|.+|.
T Consensus 296 gl~~~kg~i~~~~ 308 (335)
T cd01294 296 GLPPNKKTITLVK 308 (335)
T ss_pred CCCCCCCeEEEEe
Confidence 9976666666664
No 86
>PRK13308 ureC urease subunit alpha; Reviewed
Probab=99.71 E-value=5.6e-16 Score=154.84 Aligned_cols=198 Identities=19% Similarity=0.204 Sum_probs=116.2
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecc---hHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCC----hhhHHHHHhCCcEE
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIG---DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA----SGTAARFGDQGIVA 305 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~g---d~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~----~~~i~~~~~~gv~~ 305 (448)
+++.+.++++.|.++|++|.+|+.. ..-++..+.++ .+...|+.|..... ++-++.+...+|-+
T Consensus 226 t~~~i~~aL~~A~~~dv~VaiHadtlne~g~~E~t~~a~---------~gr~iH~~H~egaggghapd~l~~~~~~n~lp 296 (569)
T PRK13308 226 MPAAIDTCLEVADEYDFQVQLHTDTLNESGFVEDTLAAI---------GGRTIHMYHTEGAGGGHAPDIIRVVGEPHCLP 296 (569)
T ss_pred CHHHHHHHHHHHHhcCCEEEEeCCCcCcchHHHHHHHHh---------cCCeEEEEeccCCccCchhHHHHHhCCCCccC
Confidence 5788999999999999999999964 22233333332 24578888887653 34444444455543
Q ss_pred -eeccccccC--chhHH----------HH------hcCHhhhh-hhhhhHHHHHHcCCceeecCCCCCCCC--CHHHHHH
Q 013175 306 -SMQPQHLLD--DADSA----------RK------KLGVDRAE-RESYLFQSLLANNALLALGSDWPVADI--NPLCAIR 363 (448)
Q Consensus 306 -~~~P~~~~~--~~~~~----------~~------~~g~~r~~-~~~~~~~~~~~~Gv~v~~gSD~p~~~~--~p~~~~~ 363 (448)
|+.|+--+. ..+.. .. .+...|.. .....=.-|.+.|+...++||+....- .-+.-.|
T Consensus 297 ~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~~d~afa~srir~~ti~ae~~l~d~g~~s~~~sds~~mgr~~e~i~r~~ 376 (569)
T PRK13308 297 SSTNPTNPYTVNTFDEHLDMTMVCHHLNPDVPEDVAFAESRIRAQTIAAEDVLHDIGAISMLGSDSQGMGRIAEVIARTW 376 (569)
T ss_pred CCCCCCCCCccCchhhhcCeEEEecCCCCCCcchhhhhhhhccceeeccCchhhcCCcEEEEecchHHHhHHHHHHHHHH
Confidence 344442110 00000 00 01111110 111111237889999999999853211 1111111
Q ss_pred H-HHcCCC-CCC---C-CCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCeee
Q 013175 364 T-AMKRIP-PGW---D-NAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIE 437 (448)
Q Consensus 364 ~-a~~r~~-~~~---~-~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v~ 437 (448)
. +-..+. .+. . ..-...++++. .|+++|+|||+++|+++++|+|++||.||||+|+.+++. .++.
T Consensus 377 q~a~~~~~~~g~l~~~~~~~~dn~rv~r--~L~~~T~npA~alGi~~~vGsLe~Gk~ADLVv~d~d~fg-------v~p~ 447 (569)
T PRK13308 377 QLASKMKDQRGPLPEDRGTFADNARIKR--YIAKYTINPAITFGIDDHIGSLEPGKLADIVLWRPAFFG-------IKPE 447 (569)
T ss_pred HHHHHHhhcCCCCCcccccCCchhhhhH--HHHHHhHHHHHHcCCCCCceeeCCCCcCCEEEECCcccC-------CCee
Confidence 1 111110 110 0 00122334444 499999999999999988999999999999999988764 2478
Q ss_pred EEEECCEEecC
Q 013175 438 ATYVSGVQAYP 448 (448)
Q Consensus 438 ~t~~~G~~V~~ 448 (448)
.||++|+++|.
T Consensus 448 ~ti~~G~iv~~ 458 (569)
T PRK13308 448 LVIKGGFPAWA 458 (569)
T ss_pred EEEECCEEEEe
Confidence 89999999873
No 87
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=99.71 E-value=4.6e-16 Score=146.41 Aligned_cols=220 Identities=18% Similarity=0.135 Sum_probs=142.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcchhhHHHHHH
Q 013175 107 PEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLIN 186 (448)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~~~~~~~~~ 186 (448)
+.+++++++...+.+..++++.|+||+.|+... . ......+.+.. .++.+|............ ...
T Consensus 43 ~~~~~~~~~~~a~~~~~e~l~~GtTt~~d~~~~---~-----~~~~~a~~~a~---~~~g~r~~~~~~~~~~~~---~~~ 108 (263)
T cd01305 43 AQADDRELAEAMRKVLRDMRETGIGAFADFREG---G-----VEGIELLRRAL---GKLPVPFEVILGRPTEPD---DPE 108 (263)
T ss_pred HhCCHHHHHHHHHHHHHHHHhcCCeEEEEccCc---c-----hhHHHHHHHHH---HhcCCCceEEeccCCcch---HHH
Confidence 457899999999999999999999999998421 0 11111122222 234455322111111110 000
Q ss_pred hcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHH
Q 013175 187 KTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLD 266 (448)
Q Consensus 187 ~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~ 266 (448)
. ++...++ ++ ...|+ ..+ ++++++.|+++|+++++|+.+..... ...
T Consensus 109 ~-------------~~~~~~~-~~-----~~~~~----------~~~---l~~~~~~A~~~g~~v~~H~~e~~~~~-g~~ 155 (263)
T cd01305 109 I-------------LLEVADG-LG-----LSSAN----------DVD---LEDILELLRRRGKLFAIHASETRESV-GMT 155 (263)
T ss_pred H-------------HHhhccc-cc-----CCCCC----------ccC---HHHHHHHHHHCCCeeEEecCCCCCCC-Cch
Confidence 0 0001111 10 01122 122 99999999999999999998754310 011
Q ss_pred HHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCcee
Q 013175 267 MYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLA 346 (448)
Q Consensus 267 a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~ 346 (448)
.++.+.+. + ...++||..+++++++++++.|+.+++||.+.. .++ ...+|+++++++|++++
T Consensus 156 ~i~~~~~~-~----~~~i~H~~~l~~~~~~~la~~g~~v~~~P~sn~--------~l~-----~g~~p~~~l~~~Gv~v~ 217 (263)
T cd01305 156 DIERALDL-E----PDLLVHGTHLTDEDLELVRENGVPVVLCPRSNL--------YFG-----VGIPPVAELLKLGIKVL 217 (263)
T ss_pred hHHHHHhC-C----CCEEEEcCCCCHHHHHHHHHcCCcEEEChhhHH--------HhC-----CCCCCHHHHHHCCCcEE
Confidence 12222221 2 246899999999999999999999999997521 222 34679999999999999
Q ss_pred ecCCCCC-CCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHH
Q 013175 347 LGSDWPV-ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARA 399 (448)
Q Consensus 347 ~gSD~p~-~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~ 399 (448)
+|||++. .+.+++..++.++.+... ...+++.++|+++|.|+|++
T Consensus 218 lGtD~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~aT~~gA~~ 263 (263)
T cd01305 218 LGTDNVMVNEPDMWAEMEFLAKYSRL--------QGYLSPLEILRMATVNAAEF 263 (263)
T ss_pred EECCCCccCCCCHHHHHHHHHHHhcc--------cccCCHHHHHHHHhhccccC
Confidence 9999753 467899999988765431 12579999999999999973
No 88
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.
Probab=99.71 E-value=1.9e-15 Score=148.69 Aligned_cols=176 Identities=19% Similarity=0.180 Sum_probs=107.9
Q ss_pred CCHHHHHHHHHHHHHCC----Cc--EEEEec-chHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCC------hhhHHHH
Q 013175 232 MELESLLSMTMASDKSG----LQ--VAIHAI-GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA------SGTAARF 298 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g----~~--v~iHa~-gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~------~~~i~~~ 298 (448)
.+.++|+++.+.++..| ++ +++|.- +...++..++.+++ .. ...+.-|-.++. ++.++.+
T Consensus 168 ~~~~~l~~~~~~~~~~g~~~~~~g~~~vH~g~~~~~l~~l~~~~~~----~d---i~~~~f~pth~~r~~~l~~~~i~~~ 240 (389)
T TIGR01975 168 PTVEHLTNMAAEARVGGLLGGKPGIVNFHVGDSKRALQPIYELVEN----TD---VPITQFLPTHINRNVPLFEAGLEFA 240 (389)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCchhhHHHHHHHHHh----cC---CChhheecCccCCCHHHHHHHHHHH
Confidence 46789999999999998 99 999974 34445555554432 11 111111222222 2444444
Q ss_pred HhCCcEEeec-cccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCce---eecCCCCCC-C-CC---------------
Q 013175 299 GDQGIVASMQ-PQHLLDDADSARKKLGVDRAERESYLFQSLLANNALL---ALGSDWPVA-D-IN--------------- 357 (448)
Q Consensus 299 ~~~gv~~~~~-P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v---~~gSD~p~~-~-~~--------------- 357 (448)
++ |..+.+. |....+ +..... .....++.++++|+++ ++|||+..+ | .+
T Consensus 241 ~~-gg~iDv~~~~~~~~--------l~~~~~-~~~~~~~~~~~~Gv~~~~i~isSD~~gs~p~~~~~g~~~~~g~g~~~s 310 (389)
T TIGR01975 241 KK-GGTIDLTSSIDPQF--------RKEGEV-APAEGIKKALEAGVPLEKVTFSSDGNGSQPFFDENGELTGLGVGSFET 310 (389)
T ss_pred Hh-CCcEEEeCCCCccc--------hhcccc-ChHHHHHHHHHcCCCcceEEEEeCCCCCCCccccccccccCCcCcHHH
Confidence 44 5444443 222110 111000 1123568899999975 999997532 1 11
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCeee
Q 013175 358 PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIE 437 (448)
Q Consensus 358 p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v~ 437 (448)
.+..+..++. ..+++++++|+++|.|||+++|++ .+|+|++|+.|||+|+|.+ + .+.
T Consensus 311 l~~~~~~lv~------------~g~ls~~eal~~~T~npA~~Lgl~-~~G~I~~G~~ADlvild~~-~---------~i~ 367 (389)
T TIGR01975 311 LFEEVREAVK------------DGDVPLEKALRVITSNVAGVLNLT-GKGEISPGNDADLVVLDPD-L---------RIH 367 (389)
T ss_pred HHHHHHHHHH------------hCCCCHHHHHHHHHHHHHHHhCCC-CCCeECCCCcCCEEEEcCC-C---------CEE
Confidence 2333433332 335899999999999999999998 5899999999999999987 2 244
Q ss_pred EEEECCEEec
Q 013175 438 ATYVSGVQAY 447 (448)
Q Consensus 438 ~t~~~G~~V~ 447 (448)
.|+.+|+.++
T Consensus 368 ~v~~~G~~v~ 377 (389)
T TIGR01975 368 SVIARGKLMV 377 (389)
T ss_pred EEEECCEEEE
Confidence 5555555543
No 89
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=99.69 E-value=2.6e-15 Score=149.55 Aligned_cols=179 Identities=23% Similarity=0.242 Sum_probs=114.9
Q ss_pred CCHHHHHHHHHHHHHCCC------cEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEeccc---CChhhHHHHHhCC
Q 013175 232 MELESLLSMTMASDKSGL------QVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQH---LASGTAARFGDQG 302 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~------~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~---~~~~~i~~~~~~g 302 (448)
.+++.++++.+.++..+. ++++|+.... ..++.+.+.....|....+.+..|+.. ..++.++ +.+.|
T Consensus 168 ~~~~~l~~~~~~a~~~~~~~g~~~~i~vH~~~~~---~~l~~v~~~l~~~Gv~~~~~~~~H~~~~~~~~~~~~~-~~~~G 243 (388)
T PRK10657 168 PTVEELARLAAEARVGGLLSGKAGIVHVHMGDGK---KGLQPLFELLENTDIPISQFLPTHVNRNEPLFEQALE-FAKKG 243 (388)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCEEEEEeCCch---HHHHHHHHHHHhcCCCcceeeCcccCCCHHHHHHHHH-HHHcC
Confidence 367888888877775444 7999987322 233444333333465545667788775 2234444 44567
Q ss_pred cEEeec-cccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCC---ceeecCCCCCCC-C----------------CHHHH
Q 013175 303 IVASMQ-PQHLLDDADSARKKLGVDRAERESYLFQSLLANNA---LLALGSDWPVAD-I----------------NPLCA 361 (448)
Q Consensus 303 v~~~~~-P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv---~v~~gSD~p~~~-~----------------~p~~~ 361 (448)
..+.+. +..... ++... ....++..+++.|+ +++++||+.... . ..+..
T Consensus 244 ~~~~v~~~~~~~~---------~~~~~-~~~~~l~~~~~~G~~~d~v~l~tD~~~~~~~~~~~g~~~~~g~~~~~~l~~~ 313 (388)
T PRK10657 244 GVIDLTTSDPDFL---------GEGEV-APAEALKRALEAGVPLSRVTLSSDGNGSLPKFDEDGNLVGLGVGSVESLLEE 313 (388)
T ss_pred CeEEEecCCCccc---------ccCcc-CHHHHHHHHHHcCCChhheEEECCCCCCCceeccCCCEeccCcCchhhHHHH
Confidence 766443 221100 00000 12356788999998 789999963211 0 12333
Q ss_pred HHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCeeeEEEE
Q 013175 362 IRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYV 441 (448)
Q Consensus 362 ~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v~~t~~ 441 (448)
+..++. ..++|++++++++|.|||+++++++ +|+|++|+.|||+|+| +.+ .|..|++
T Consensus 314 ~~~~~~------------~~gis~~~~l~~aT~npA~~lg~~~-~G~l~~G~~AD~vv~~-~~~---------~~~~~~~ 370 (388)
T PRK10657 314 VRELVK------------DEGLPLEDALKPLTSNVARFLKLNG-KGEILPGKDADLLVLD-DDL---------RIEQVIA 370 (388)
T ss_pred HHHHHH------------hcCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCCccCEEEEC-CCC---------CEEEEEE
Confidence 333321 2368999999999999999999987 8999999999999999 322 4888999
Q ss_pred CCEEec
Q 013175 442 SGVQAY 447 (448)
Q Consensus 442 ~G~~V~ 447 (448)
+|++|+
T Consensus 371 ~G~~v~ 376 (388)
T PRK10657 371 KGKLMV 376 (388)
T ss_pred CCEEEE
Confidence 999886
No 90
>PRK09237 dihydroorotase; Provisional
Probab=99.69 E-value=6.7e-15 Score=146.02 Aligned_cols=171 Identities=15% Similarity=0.142 Sum_probs=109.6
Q ss_pred HHHHHCCCcEEEEecchH-HHHHHHHHHHHhHHhcCCCCCCCeEEecccCCh-----------hhHHHHHhCCcEEeecc
Q 013175 242 MASDKSGLQVAIHAIGDR-ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-----------GTAARFGDQGIVASMQP 309 (448)
Q Consensus 242 ~~a~~~g~~v~iHa~gd~-a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~-----------~~i~~~~~~gv~~~~~P 309 (448)
..+.+.|+++.+|+.... ..+..+.. . . ....+.||...++ +.+....++|+.+.+..
T Consensus 175 ~~a~~~g~~v~~H~~~~~~~~~~l~~~----l---~---~g~~~~H~~~~~~~~~~~~~~~~~~~a~~~l~~G~~~~ig~ 244 (380)
T PRK09237 175 AIAAEANLPLMVHIGNPPPSLEEILEL----L---R---PGDILTHCFNGKPNRILDEDGELRPSVLEALERGVRLDVGH 244 (380)
T ss_pred HHHHhcCCCEEEEcCCCCCCHHHHHhh----c---c---CCCEEEecCCCCCCCccCCCCcchHHHHHHHHCCEEEEecC
Confidence 334589999999995432 12222221 1 1 1246899987765 56677778899888653
Q ss_pred ccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCC-ceeecCCCCCCC--CCHHHHHHHHHcCCCCCCCCCCCCCCCCCHH
Q 013175 310 QHLLDDADSARKKLGVDRAERESYLFQSLLANNA-LLALGSDWPVAD--INPLCAIRTAMKRIPPGWDNAWIPSERISLT 386 (448)
Q Consensus 310 ~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv-~v~~gSD~p~~~--~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~ 386 (448)
..... ...+.+.++++|+ +.+++||..... ..|...+...+.+. .+.+++++
T Consensus 245 g~~~~----------------~~~~~~~l~~~g~~~~~l~tD~~~~~~~~~~~~~l~~~~~~~---------~~~g~~~~ 299 (380)
T PRK09237 245 GTASF----------------SFKVAEAAIAAGILPDTISTDIYCRNRINGPVYSLATVMSKF---------LALGMPLE 299 (380)
T ss_pred CCCcc----------------cHHHHHHHHHCCCCceEEECCCCCCCcccchHhHHHHHHHHH---------HHhCCCHH
Confidence 32111 1123345778886 569999964321 12322233222211 02358999
Q ss_pred HHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC----Chhh-h----ccCeeeEEEECCEEecC
Q 013175 387 DALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE----DFAA-E----VSASIEATYVSGVQAYP 448 (448)
Q Consensus 387 ~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~----~~~~-~----~~~~v~~t~~~G~~V~~ 448 (448)
++++++|.|||+++|++ .+|+|++|+.|||++++.+... ++.. + ....|..||++||+||.
T Consensus 300 ~al~~aT~n~A~~lgl~-~~G~l~~G~~ADlvv~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~v~G~~~~~ 369 (380)
T PRK09237 300 EVIAAVTKNAADALRLP-ELGRLQVGSDADLTLFTLKDGPFTLTDSEGDSLIGERLLTPLATVRGGKVVLT 369 (380)
T ss_pred HHHHHHHHHHHHHcCCC-CCCcCCCCCcCCEEEEeCCCCCccccCCCCCEEEecCCCcceEEEECCEEEEc
Confidence 99999999999999995 4899999999999999854222 2211 1 13579999999999973
No 91
>PLN02303 urease
Probab=99.69 E-value=3.1e-15 Score=154.27 Aligned_cols=104 Identities=18% Similarity=0.172 Sum_probs=76.6
Q ss_pred HHHHcCCceeecCCCCCCC------CCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCccccc
Q 013175 337 SLLANNALLALGSDWPVAD------INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLS 410 (448)
Q Consensus 337 ~~~~~Gv~v~~gSD~p~~~------~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~ 410 (448)
-|.+.|++..++||+.... ...|.....+..... +...........+++++|+++|+|||+++|+++.+|||+
T Consensus 617 ~l~d~G~~s~~~SDs~amgr~ge~i~r~~q~A~k~~~~~g-~l~~~~~~~dn~rv~~aL~~~TiN~A~AlG~~~~vGSLe 695 (837)
T PLN02303 617 ILHDMGAISIISSDSQAMGRIGEVITRTWQTAHKMKSQRG-ALEPRGADNDNFRIKRYIAKYTINPAIAHGMSHFVGSVE 695 (837)
T ss_pred hhhccCCEEEEeccchhhCcccceeeehHHHHHHHHHhcC-CCCCccccccccCHHHHHHHHhHHHHHHCCcccCceeeC
Confidence 3788999999999986221 234555443322111 000011112347899999999999999999999999999
Q ss_pred CCCcccEEEecCCCCCChhhhccCeeeEEEECCEEecC
Q 013175 411 PGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 448 (448)
Q Consensus 411 ~Gk~ADlvvld~d~~~~~~~~~~~~v~~t~~~G~~V~~ 448 (448)
+||.||||||+.+++. .++..||++|++||.
T Consensus 696 ~GK~ADlVvw~~~~fg-------~~~~~vi~~G~ivy~ 726 (837)
T PLN02303 696 VGKLADLVLWKPAFFG-------AKPEMVIKGGQIAWA 726 (837)
T ss_pred CCcccCEEEecccccC-------CCeeEEEECCEEEEc
Confidence 9999999999987764 458999999999984
No 92
>TIGR01178 ade adenine deaminase. The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected.
Probab=99.68 E-value=5e-15 Score=151.67 Aligned_cols=245 Identities=21% Similarity=0.187 Sum_probs=147.4
Q ss_pred HHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCC--c-----c-hh--hHHHHHHhcCCcC
Q 013175 123 NLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPL--E-----T-WS--SLADLINKTGHVL 192 (448)
Q Consensus 123 ~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~--~-----~-~~--~~~~~~~~~~~~~ 192 (448)
+.++.+|+|||.+++...+..... +.++.+.+ ...+.+++++...+. + . .. ...++.....
T Consensus 71 ~~al~~GvTtvv~~P~~~~~v~g~----~~~~~~~~--~a~~~~~d~~~~~~s~vp~~~~e~~g~~~~~~~i~~~~~--- 141 (552)
T TIGR01178 71 KLVLPHGVTTVVSDPHEIANVNGE----DGINFMLN--NAKKTPLNFYFMLPSCVPALQFETSGAVLTAEDIDELME--- 141 (552)
T ss_pred HHHHCCCEEEEEcCCCCCCCCCCH----HHHHHHHH--HhhcCCcEEEEECCCCCCCCcccCCCCccCHHHHHHHHc---
Confidence 457999999999987644332221 11222222 223568887665431 1 0 00 1122211111
Q ss_pred CCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhH
Q 013175 193 SDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVV 272 (448)
Q Consensus 193 ~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~ 272 (448)
+-.+.|+|.|++- | +... .++.+.+.++.+.+.|..+..||.+-. ...+.++.+.
T Consensus 142 --~~~V~glke~m~~-----------~--------~v~~-~d~~~l~~i~~a~~~g~~I~gHap~l~--~~eL~~~~~a- 196 (552)
T TIGR01178 142 --LDEVLGLAEVMDY-----------P--------GVIN-ADIEMLNKINSARKRNKVIDGHCPGLS--GKLLNKYISA- 196 (552)
T ss_pred --CCCccEEEEEecc-----------h--------hhcC-CCHHHHHHHHHHHhCCCEEEecCCCCC--HHHHHHHHHc-
Confidence 1246778887631 1 1111 233444555889999999999997432 2334444321
Q ss_pred HhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCC
Q 013175 273 VTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP 352 (448)
Q Consensus 273 ~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p 352 (448)
.....|+.. +.++...-.++|+.+.+.-.+...+.. ...|+... ..+.+++++||.-
T Consensus 197 --------Gi~~dHe~~-s~~ea~e~~~~Gm~~~ir~gs~~~n~~-------------~~~~~~~~-~~~~~~~l~TD~~ 253 (552)
T TIGR01178 197 --------GISNDHEST-SIEEAREKLRLGMKLMIREGSAAKNLE-------------ALHPLINE-KNCRSLMLCTDDR 253 (552)
T ss_pred --------CCCCCcCcC-CHHHHHHHHHCCCEEEEeCCccccCHH-------------HHHHHHhh-cCCceEEEEeCCC
Confidence 346788665 445555556789988876555332211 11121111 4678999999931
Q ss_pred CCCCCHH------HHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC
Q 013175 353 VADINPL------CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE 426 (448)
Q Consensus 353 ~~~~~p~------~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~ 426 (448)
.+.+++ ..+..++. .++++++|++++|.|||+++|+++ .|+|+||+.||||+++..
T Consensus 254 -~~~~~~~~g~l~~~v~~ai~-------------~g~~~~~Al~maT~npA~~lgl~~-~G~I~pG~~ADlvvl~~l--- 315 (552)
T TIGR01178 254 -HVNDILNEGHINHIVRRAIE-------------HGVDPFDALQMASINPAEHFGIDV-GGLIAPGDPADFVILKDL--- 315 (552)
T ss_pred -ChhHHHhcCCHHHHHHHHHH-------------cCCCHHHHHHHHHHHHHHHcCCCC-CcccCCCCcCCEEEECCC---
Confidence 223333 23333331 258999999999999999999986 799999999999999831
Q ss_pred ChhhhccCeeeEEEECCEEec
Q 013175 427 DFAAEVSASIEATYVSGVQAY 447 (448)
Q Consensus 427 ~~~~~~~~~v~~t~~~G~~V~ 447 (448)
.+.++..||++|++|.
T Consensus 316 -----~~~~v~~v~~~G~~v~ 331 (552)
T TIGR01178 316 -----RNFKVNKTYVKGKLLD 331 (552)
T ss_pred -----CCceEEEEEECCEEEc
Confidence 1235889999999885
No 93
>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []. The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....
Probab=99.66 E-value=2.2e-15 Score=146.76 Aligned_cols=170 Identities=23% Similarity=0.257 Sum_probs=111.8
Q ss_pred CCCHHHHHHHHHHHHH-----C-CCcEEEEecchHHHH---------HHHHHHHHhHH-hcCCCCCCCeEEecccCChhh
Q 013175 231 VMELESLLSMTMASDK-----S-GLQVAIHAIGDRAND---------LVLDMYKSVVV-TTGKRDQRFRIEHAQHLASGT 294 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~-----~-g~~v~iHa~gd~a~~---------~~l~a~~~~~~-~~~~~~~r~~i~H~~~~~~~~ 294 (448)
.++.+.++..++.+++ . +.++++|+.+..... ..++.+....- .....+....+.|+..+++++
T Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 219 (333)
T PF01979_consen 140 TVSDEELREAVELAKEFLAAEKLGIPVHIHVAEGTGEVEAMTHLYGMSPIEALDHLGLLEEAIDDGVDLIAHGTHLSDEE 219 (333)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHTHEEEEEESSSHHHHCCCHHHHSHHHHHHHHHHHSCHHHHHHHCEEEEEHTTSEHHH
T ss_pred cchhhhhhhHHhhhhhHHHHHhhcccceeeeccCcccceeEeeeeeccchhhhccchhhhhhcccccceeeccccCCHHH
Confidence 4678889999999988 3 999999998765430 01111111000 000013368899999999999
Q ss_pred HHHHHhCCcEEeeccccccCchh---HH---HHhc-CHhhhhhhhhhHHHHHHc-CCceeecCCCCCCCCCHHHHHHHHH
Q 013175 295 AARFGDQGIVASMQPQHLLDDAD---SA---RKKL-GVDRAERESYLFQSLLAN-NALLALGSDWPVADINPLCAIRTAM 366 (448)
Q Consensus 295 i~~~~~~gv~~~~~P~~~~~~~~---~~---~~~~-g~~r~~~~~~~~~~~~~~-Gv~v~~gSD~p~~~~~p~~~~~~a~ 366 (448)
++++++.+..+..||........ .. .... +.........++..+++. |+. +|||. +. ..+...+
T Consensus 220 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~--lgtDg-~~-----~~l~~~~ 291 (333)
T PF01979_consen 220 IELLKETGIGIIHCPISNDSAPHKPGKAIMMDGTAEGIYGLGSGGAPLFRMLDKMGVN--LGTDG-VA-----EELKLFV 291 (333)
T ss_dssp HHHHHHHTHEEEEEHHHHHHHHHHTTHHSETTBSBTSBSCTTHHHHHHHHHHHCTTHE--ETTCT-TC-----HHHHHHH
T ss_pred hhhhhccCCccccccchhhhhccccccccccchhccccccccccccchhhhhhhcccc--ccccc-cc-----ccccccc
Confidence 99999999999999874211000 00 0000 000000234566777777 888 99993 22 5555544
Q ss_pred cCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEec
Q 013175 367 KRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILS 421 (448)
Q Consensus 367 ~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld 421 (448)
.. .++++++|+++|.|||+++|+++.+|+|++||+|||||+|
T Consensus 292 ~~-------------~~~~~~~l~~aT~n~Ak~lg~~~~~G~i~~G~~ADlvv~D 333 (333)
T PF01979_consen 292 RL-------------GISPEEALKMATINPAKILGLDDDKGSIEPGKDADLVVLD 333 (333)
T ss_dssp HH-------------HSHHHHHHHHHTHHHHHHTTSTTTSSSSSTTSB--EEEEE
T ss_pred cc-------------cccccccccccchhHHHHcCCCCCEEEeCcCCCcCEEEeC
Confidence 21 2899999999999999999998889999999999999997
No 94
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]
Probab=99.66 E-value=4.1e-15 Score=135.49 Aligned_cols=287 Identities=19% Similarity=0.141 Sum_probs=158.7
Q ss_pred HHHHHHHHHHHhcCcceeEeCcc---CCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcc--hhhHHHHHHhcCC
Q 013175 116 EALLRASNLALSRGVTTVVDFGR---YYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLET--WSSLADLINKTGH 190 (448)
Q Consensus 116 ~~~~~~~~~~~~~GvTtv~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~--~~~~~~~~~~~~~ 190 (448)
.++..--+.+++.|||||.|.-. ...++.....+++++..+.+...+|.+..+-.+++.++- ...+..+.+..
T Consensus 75 aAi~ahD~~l~~sGITTv~dal~iGd~~~gg~r~~~~~~midaI~~~~~~g~lradHr~HlRcEvs~~~~l~~~e~~~-- 152 (377)
T COG3454 75 AAILAHDAQLAASGITTVLDALAIGDVRDGGLRLENLRKMIDAIEEAQAAGRLRADHRLHLRCEVSHPATLPLFEDLM-- 152 (377)
T ss_pred HHHHHhhHHHHhcChhhHHhhhhcCcccCCccchHHHHHHHHHHHHHHhccchhhccceeeeeecCChhHHHHHHHHh--
Confidence 45566677899999999999632 223333334556666666666567777665555443321 11111111111
Q ss_pred cCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHH
Q 013175 191 VLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKS 270 (448)
Q Consensus 191 ~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~ 270 (448)
.++.++.- -.+|.++|.+.-.-.+-|... +.+...+|++++.+.+++-....-. +.+. .+.. +..
T Consensus 153 -~~p~v~Li---SlMDH~PGQrQf~~le~Y~~y--y~~k~~~s~~e~~~~i~~r~a~~~~-----y~~~-~r~~---i~~ 217 (377)
T COG3454 153 -DHPRVKLI---SLMDHTPGQRQFANLEKYREY--YQGKRGLSDEEFAEFIEERQALSAR-----YSDP-NRQA---IAA 217 (377)
T ss_pred -cCCCeeEE---EecCCCCCcchhhhHHHHHHH--HHhhcCCCHHHHHHHHHHHHHHHhh-----cccc-hHHH---HHH
Confidence 12233321 247999887765444444321 1244557777777665443221100 0111 1112 222
Q ss_pred hHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHH-----------HHhcCHhhhhhhhhhHHHHH
Q 013175 271 VVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSA-----------RKKLGVDRAERESYLFQSLL 339 (448)
Q Consensus 271 ~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~-----------~~~~g~~r~~~~~~~~~~~~ 339 (448)
.-.+.|. ....| --.+.+.++.....|+.++-+|+.+-...... +-..|... .++...+++.
T Consensus 218 ~c~~rgI----~lASH-DDaT~~hV~es~~~Gv~iAEFPtT~eAA~asr~~Gm~VlMGAPNivrGgSH--sGNvsA~ela 290 (377)
T COG3454 218 LCRERGI----ALASH-DDATVEHVAESHGLGVAIAEFPTTVEAAKASRELGMQVLMGAPNIVRGGSH--SGNVSARELA 290 (377)
T ss_pred HHHHcCC----ceecC-CcCcHHHHHHHHhcCeeEEeCccHHHHHHHHHHhCchhhcCCCceeccCCc--ccchhHHHHH
Confidence 2122221 11222 12234555555666666666666432100000 00112221 4567789999
Q ss_pred HcCCceeecCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEE
Q 013175 340 ANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVI 419 (448)
Q Consensus 340 ~~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvv 419 (448)
+.|+..+++||+- |.+.+........ ....+++.||+++.|.|||+++|+.+ +|+|+||++||||.
T Consensus 291 ~~glLDiLsSDY~--P~SLl~A~F~La~-----------~~~~~~lpqAvalvt~nPA~algl~D-RG~Ia~GlrADlv~ 356 (377)
T COG3454 291 QHGLLDILSSDYV--PASLLHAAFRLAD-----------LGSNISLPQAVALVTKNPARALGLTD-RGRIAPGLRADLVR 356 (377)
T ss_pred hCCceeeecccCC--cHHHHHHHHHHhh-----------hhcccCHHHHHHHhccCHHHhcCCCc-ccccccccccceEE
Confidence 9999999999963 3333322221111 11236999999999999999999996 89999999999997
Q ss_pred ecCCCCCChhhhccCeeeEEEECCEEec
Q 013175 420 LSTSSWEDFAAEVSASIEATYVSGVQAY 447 (448)
Q Consensus 420 ld~d~~~~~~~~~~~~v~~t~~~G~~V~ 447 (448)
+..+-- -..|..||+.|+.|+
T Consensus 357 v~~~~~-------vp~ir~vwr~G~rv~ 377 (377)
T COG3454 357 VRRDGG-------VPVIRTVWRAGKRVA 377 (377)
T ss_pred EecCCC-------CceeeeeeecceecC
Confidence 764421 135899999999885
No 95
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=99.65 E-value=1.2e-14 Score=136.91 Aligned_cols=235 Identities=26% Similarity=0.258 Sum_probs=152.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCcch--------
Q 013175 107 PEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETW-------- 178 (448)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~~~-------- 178 (448)
...++++.+........+++++|||||.++....+.......+. .+.+...+.. .+|+.+.......
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 100 (275)
T cd01292 26 EELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTTTKAAIE---AVAEAARASA--GIRVVLGLGIPGVPAAVDEDA 100 (275)
T ss_pred cccCHHHHHHHHHHHHHHHHhcCceEEEeeEeecCccccchHHH---HHHHHHHHhc--CeeeEEeccCCCCccccchhH
Confidence 45688889999999999999999999999875432211111111 2222222211 4666543222110
Q ss_pred -hhHHHHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecc
Q 013175 179 -SSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIG 257 (448)
Q Consensus 179 -~~~~~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~g 257 (448)
+...+.+.... + ..+.|+|+.... .. ...+.+.++++++.|+++|+++++|+.+
T Consensus 101 ~~~~~~~i~~~~----~-~~~~gi~~~~~~-------------~~-------~~~~~~~~~~~~~~a~~~~~~i~~H~~~ 155 (275)
T cd01292 101 EALLLELLRRGL----E-LGAVGLKLAGPY-------------TA-------TGLSDESLRRVLEEARKLGLPVVIHAGE 155 (275)
T ss_pred HHHHHHHHHHHH----h-cCCeeEeeCCCC-------------CC-------CCCCcHHHHHHHHHHHHcCCeEEEeeCC
Confidence 01111111100 0 123344432211 10 0146789999999999999999999976
Q ss_pred hHH----HHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhh
Q 013175 258 DRA----NDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESY 333 (448)
Q Consensus 258 d~a----~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~ 333 (448)
... +...++.. .. +.+..+.|+...+++.++++++.|+.+++||.+..... .+. ....
T Consensus 156 ~~~~~~~~~~~~~~~-------~~-~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---------~~~-~~~~ 217 (275)
T cd01292 156 LPDPTRALEDLVALL-------RL-GGRVVIGHVSHLDPELLELLKEAGVSLEVCPLSNYLLG---------RDG-EGAE 217 (275)
T ss_pred cccCccCHHHHHHHH-------hc-CCCEEEECCccCCHHHHHHHHHcCCeEEECCccccccc---------CCc-CCcc
Confidence 543 23333221 11 45889999999999999999999999999998754321 001 3456
Q ss_pred hHHHHHHcCCceeecCCCCCC--CCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHH
Q 013175 334 LFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARA 399 (448)
Q Consensus 334 ~~~~~~~~Gv~v~~gSD~p~~--~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~ 399 (448)
+++.+++.|+++++|||+|.. +.+++..++.++.... .+++.+++++++|.|||++
T Consensus 218 ~~~~~~~~g~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~t~n~a~~ 275 (275)
T cd01292 218 ALRRLLELGIRVTLGTDGPPHPLGTDLLALLRLLLKVLR----------LGLSLEEALRLATINPARA 275 (275)
T ss_pred cHHHHHHCCCcEEEecCCCCCCCCCCHHHHHHHHHHHHh----------cCCCHHHHHHHHhccccCC
Confidence 899999999999999999864 5678888877664321 1279999999999999974
No 96
>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type. This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes.
Probab=99.62 E-value=7.7e-15 Score=142.22 Aligned_cols=267 Identities=13% Similarity=0.075 Sum_probs=151.2
Q ss_pred HHHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCC-eeEEEEccCCc--chhhHHHHHHhcCCcC
Q 013175 116 EALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKM-KIRVCLFFPLE--TWSSLADLINKTGHVL 192 (448)
Q Consensus 116 ~~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~irv~~~~~~~--~~~~~~~~~~~~~~~~ 192 (448)
..+..+.--+.+.|||++.+|+++.|...... ......+++... .. .+|+.++.... ......++.....
T Consensus 17 ~~~~~~~~~~~~~~vt~vv~mPnt~P~~~~~e---~~~~~~~~~~~~-s~~~vDf~~~~~v~~~~~~~~~Ei~~l~~--- 89 (341)
T TIGR00856 17 GAMLKAVLPYTSEIFSRAIVMPNLAPPVTTVE---AAVAYRERILDA-VPAGHDFTPLMTLYLTDSLTPEELERAKN--- 89 (341)
T ss_pred chHHHHHHHHHHhhcCEEEECCCCCCCCCCHH---HHHHHHHHHHhh-CCCCcceEEEEEEECCCCCCHHHHHHHHH---
Confidence 34556666777888999999987655443221 111222222222 12 35776554331 1112333322110
Q ss_pred CCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchH-HH-------HHH
Q 013175 193 SDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDR-AN-------DLV 264 (448)
Q Consensus 193 ~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~-a~-------~~~ 264 (448)
...+.|+|+|..+. .|. .+....+++.+.++++.+.+.|+++.+|++... .+ ...
T Consensus 90 --~~Gv~g~Klf~~~~----------~~~-----~~~~v~dd~~l~~~~e~~~e~g~~v~vHaEd~~~~i~~~~~e~~a~ 152 (341)
T TIGR00856 90 --EGVVRAVKLYPAGA----------TTN-----SSHGVTDIDAIMPVLEAMEKIGLPLLLHGEVTHGDIDIFDREARFI 152 (341)
T ss_pred --cCCeEEEEEccCCc----------ccC-----CCcCCCCHHHHHHHHHHHHHcCCeEEEeecCCCCCcccccchhhhh
Confidence 02467899986431 111 122234567899999999999999999998641 11 001
Q ss_pred HHHHHHhHHhcCCCCCCCeEEecccCCh-hhHHHHHhCCcEEeeccccccCchhHHHHh-cCHhhhhhhhhhHH------
Q 013175 265 LDMYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQGIVASMQPQHLLDDADSARKK-LGVDRAERESYLFQ------ 336 (448)
Q Consensus 265 l~a~~~~~~~~~~~~~r~~i~H~~~~~~-~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~-~g~~r~~~~~~~~~------ 336 (448)
...++.+.... .+.+.+|+|++.... +.+.+. +..+++++||+|+.++.+.+... +|. .+ +.+||+|
T Consensus 153 ~~~i~~lA~~~--~~~~~~i~H~st~~~~~~i~~a-~~~vt~E~~ph~L~l~~~~~~~~~~~~-~~-k~~PPlR~~~d~~ 227 (341)
T TIGR00856 153 ESVLEPLRQRF--PALKVVLEHITTKDAIDYVEDG-NNRLAATITPQHLMFTRNDLLGGGVNP-HL-YCLPILKRNIHQQ 227 (341)
T ss_pred HHHHHHHHHHc--cCCeEEEEecCcHHHHHHHHHc-CCCEEEEEcHHHHhccHHHHhccCCCC-ce-EEeCCCCCHHHHH
Confidence 11222222222 256899999875433 233332 33499999999999877654321 222 12 4566655
Q ss_pred ---HHHHcCCce-eecCCCC-CCC--------CCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccC
Q 013175 337 ---SLLANNALL-ALGSDWP-VAD--------INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 403 (448)
Q Consensus 337 ---~~~~~Gv~v-~~gSD~p-~~~--------~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~ 403 (448)
+.+..|.+. .++||+. .+. ...+.+++..+... ..+. ++.+++++++++.|.|||+++|+.
T Consensus 228 aL~~~l~~G~id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~l~~~-----~~~~-~~~~~l~~~v~~~s~nPAk~~gl~ 301 (341)
T TIGR00856 228 ALLELAASGFPKFFLGTDSAPHARHRKESSCGCAGCFSAPTALPSY-----AEVF-EEMNALENLEAFCSDNGPQFYGLP 301 (341)
T ss_pred HHHHHHHcCCCCEEEeCCCCCCChhHcCCCCCCCCcccHHHHHHHH-----HHHH-hcCCCHHHHHHHHhHhHHHHhCCC
Confidence 467789999 6999963 221 01122222221110 0011 236899999999999999999983
Q ss_pred CCcccccCCCcccEEEecCCCCC
Q 013175 404 NDVGSLSPGKIADFVILSTSSWE 426 (448)
Q Consensus 404 ~~~Gsi~~Gk~ADlvvld~d~~~ 426 (448)
.| +|||+|++ ..++
T Consensus 302 --~~------dAdi~~~~-~~~~ 315 (341)
T TIGR00856 302 --VN------STKIELVK-KEQQ 315 (341)
T ss_pred --CC------CceEEEEe-ccEE
Confidence 24 89999995 3444
No 97
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.57 E-value=6.3e-13 Score=129.77 Aligned_cols=148 Identities=16% Similarity=0.154 Sum_probs=100.8
Q ss_pred HHHHHHHHHHCCCcEEEEecchH-HHHHHHHHHHHhHHhcCCCCCCCeEEecccCCh-----------hhHHHHHhCCcE
Q 013175 237 LLSMTMASDKSGLQVAIHAIGDR-ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-----------GTAARFGDQGIV 304 (448)
Q Consensus 237 l~~~~~~a~~~g~~v~iHa~gd~-a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~-----------~~i~~~~~~gv~ 304 (448)
++..++.+.+.|+++.+|+.... ...+.+..+ . ....+.||...+. +.+.++.+.|+.
T Consensus 151 l~~~~~~a~~~~~pi~vH~~~~~~~~~~~~~~l----~------~g~~~~H~~~g~~~~~~~~~~~~~~~~~~~~~~G~~ 220 (338)
T cd01307 151 LELAKKIAKEADLPLMVHIGSPPPILDEVVPLL----R------RGDVLTHCFNGKPNGIVDEEGEVLPLVRRARERGVI 220 (338)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHh----c------CCCEEEeccCCCCCCCCCCCCcHHHHHHHHHhCCEE
Confidence 77889999999999999996533 222222221 1 1247889886553 567888899999
Q ss_pred EeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCC-ceeecCCCCCC-CC-CH----HHHHHHHHcCCCCCCCCCC
Q 013175 305 ASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNA-LLALGSDWPVA-DI-NP----LCAIRTAMKRIPPGWDNAW 377 (448)
Q Consensus 305 ~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv-~v~~gSD~p~~-~~-~p----~~~~~~a~~r~~~~~~~~~ 377 (448)
+++...... ....+.+.++++|+ +.+++||.+.. .. .| ...+....
T Consensus 221 ~d~~~G~~~----------------~~~~~~~~l~~~G~~~~~lstD~~~~~~~~~p~~~l~~~l~~l~----------- 273 (338)
T cd01307 221 FDVGHGTAS----------------FSFRVARAAIAAGLLPDTISSDIHGRNRTNGPVYALATTLSKLL----------- 273 (338)
T ss_pred EEeCCCCCc----------------hhHHHHHHHHHCCCCCeeecCCccccCCCCCccccHHHHHHHHH-----------
Confidence 875522100 00123456778897 56899998542 11 12 22222221
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCC
Q 013175 378 IPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSS 424 (448)
Q Consensus 378 ~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~ 424 (448)
..+++.+++++++|.|||+++++. .+|+|++|+.|||+|++.+.
T Consensus 274 --~~gi~~ee~~~~~T~NpA~~lgl~-~~G~l~~G~~ad~~v~~~~~ 317 (338)
T cd01307 274 --ALGMPLEEVIEAVTANPARMLGLA-EIGTLAVGYDADLTVFDLKD 317 (338)
T ss_pred --HcCCCHHHHHHHHHHHHHHHcCCC-CCCccCCCCcCCEEEEeCCC
Confidence 235899999999999999999995 58999999999999998764
No 98
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=99.54 E-value=7.8e-13 Score=128.47 Aligned_cols=141 Identities=17% Similarity=0.194 Sum_probs=105.0
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCC--hhhHHHHHhCCcEEeeccc
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQPQ 310 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~--~~~i~~~~~~gv~~~~~P~ 310 (448)
+.+.++.+++.|+++|+++++|+.+........++++.. + ..++.|+..++ +++++++++.|+.+++||.
T Consensus 171 ~~~~~~~~~~~A~~~g~~v~~H~~E~~~~~~~~~a~~~~----g----~~~i~H~~~l~~~~~~~~~l~~~gi~v~~~P~ 242 (325)
T cd01320 171 PPEKFVRAFQRAREAGLRLTAHAGEAGGPESVRDALDLL----G----AERIGHGIRAIEDPELVKRLAERNIPLEVCPT 242 (325)
T ss_pred CHHHHHHHHHHHHHCCCceEEeCCCCCCHHHHHHHHHHc----C----CcccchhhccCccHHHHHHHHHcCCeEEECCC
Confidence 678899999999999999999997654334444444432 3 23799999984 6689999999999999998
Q ss_pred cccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCC-CCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHH
Q 013175 311 HLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA-DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDAL 389 (448)
Q Consensus 311 ~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~-~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al 389 (448)
.... +|.... ....|++.++++|+++++|||.|.. ..+.+..+..++.. .++++.+ |
T Consensus 243 sn~~--------l~~~~~-~~~~p~~~l~~~Gv~v~lgTD~~~~~~~~~~~e~~~~~~~------------~~l~~~e-l 300 (325)
T cd01320 243 SNVQ--------TGAVKS-LAEHPLRELLDAGVKVTINTDDPTVFGTYLTDEYELLAEA------------FGLTEEE-L 300 (325)
T ss_pred cccc--------ccccCC-cccChHHHHHHCCCEEEECCCCCcccCCCHHHHHHHHHHH------------cCCCHHH-H
Confidence 6322 221111 2367999999999999999998754 34566666666542 2489988 5
Q ss_pred HHHhHHHHHHcccC
Q 013175 390 IAHTLSAARACFLE 403 (448)
Q Consensus 390 ~~~T~n~A~~~g~~ 403 (448)
..+|.|+++..++.
T Consensus 301 ~~~~~na~~~~f~~ 314 (325)
T cd01320 301 KKLARNAVEASFLS 314 (325)
T ss_pred HHHHHHHHHHhCCC
Confidence 66889999988765
No 99
>PRK05451 dihydroorotase; Provisional
Probab=99.54 E-value=4.2e-13 Score=130.76 Aligned_cols=256 Identities=11% Similarity=0.107 Sum_probs=142.9
Q ss_pred HHHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCCCeeEEEEccCCc--chhhHHHHHHhcCCcCCC
Q 013175 117 ALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE--TWSSLADLINKTGHVLSD 194 (448)
Q Consensus 117 ~~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~--~~~~~~~~~~~~~~~~~~ 194 (448)
.+..+++ .++|++.||+++.|.......+ ......+.......+|+.++..+. ....+.++.+...
T Consensus 25 ~~~~~~~----~~~t~~v~mPnt~P~~~~~~~l---~~~~~~a~~~~~~~~d~~~~~~i~~~~~~~~~El~~~~~----- 92 (345)
T PRK05451 25 AVVPYTA----RQFGRAIVMPNLVPPVTTVAQA---LAYRERILAALPAGSNFEPLMTLYLTDNTDPDELERAKA----- 92 (345)
T ss_pred HHHHHHH----HhcCEEEECCCCCCCCCCHHHH---HHHHHHHHhhCCCCCcEEEEEEEEeCCCCCHHHHHHHHH-----
Confidence 6666665 3599999998755544322111 112222221111235666433221 1111233222111
Q ss_pred Cee-eCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHH-H------HHHH-
Q 013175 195 WVY-LGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRA-N------DLVL- 265 (448)
Q Consensus 195 ~~~-~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a-~------~~~l- 265 (448)
.. +.|+|+|..+. .+. ...+ ..+++.+.++++.+.+.|++|.+||+.... + ...+
T Consensus 93 -~Gvv~g~Kl~~~~~----------~~~---~~~~--~~dd~~l~~~~e~~~~~g~~V~vHaE~~~~~~~~~~~e~~~~~ 156 (345)
T PRK05451 93 -SGVVTAAKLYPAGA----------TTN---SDAG--VTDIEKIYPVLEAMQKLGMPLLVHGEVTDPDIDIFDREAVFID 156 (345)
T ss_pred -CCCEEEEEEecccC----------ccC---CccC--cCCHHHHHHHHHHHHHcCCEEEEecCCCCcccccccchHHHHH
Confidence 23 34899996431 010 0011 226778999999999999999999985221 0 0011
Q ss_pred HHHHHhHHhcCCCCCCCeEEecccCChhhHHHHH--hCCcEEeeccccccCchhHHHH-hcCHhhhhhhhhhHH------
Q 013175 266 DMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFG--DQGIVASMQPQHLLDDADSARK-KLGVDRAERESYLFQ------ 336 (448)
Q Consensus 266 ~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~--~~gv~~~~~P~~~~~~~~~~~~-~~g~~r~~~~~~~~~------ 336 (448)
..+..+.... .+.+.+|+|++. .+.++.++ ..++++++||+|++++.+.+.. ..+. .. +.+||+|
T Consensus 157 ~~l~~lA~~~--pg~~lhI~Hlst--~~~~e~i~~a~~~it~Et~ph~L~l~~~~~~~~~~~~-~~-k~~PPLR~~~d~~ 230 (345)
T PRK05451 157 RVLEPLRRRF--PKLKIVFEHITT--KDAVDYVREANDNLAATITPHHLLINRNDMLVGGIRP-HL-YCLPILKRETHRQ 230 (345)
T ss_pred HHHHHHHHhc--CCCcEEEEecCc--HHHHHHHHhcCCCEEEEecHHHHhcCHHHHhCCCcCC-Ce-EEeCCCCCHHHHH
Confidence 1123233222 256899999874 44444443 4479999999999987665431 1121 12 4555655
Q ss_pred ---HHHHcCCce-eecCCCC-CCC--------CCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccC
Q 013175 337 ---SLLANNALL-ALGSDWP-VAD--------INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 403 (448)
Q Consensus 337 ---~~~~~Gv~v-~~gSD~p-~~~--------~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~ 403 (448)
+.+..|.+. +++||+. .+. .+.+.....++.... ..+ .. +.++++++++.+.|||++||+.
T Consensus 231 aLw~~l~~G~Id~~i~SDHaP~~~~~K~~~~G~~gi~~~~~g~~~~~----~~~-~~-~~~l~~~v~~~s~nPAkifGl~ 304 (345)
T PRK05451 231 ALREAATSGNPKFFLGTDSAPHARHAKESACGCAGIFSAPAALELYA----EVF-EE-AGALDKLEAFASLNGPDFYGLP 304 (345)
T ss_pred HHHHHHHcCCCCEEEeCCCCCCChHHhCCCCCCCchhhHHHHHHHHH----HHH-Hc-CCCHHHHHHHHhHHHHHHhCCC
Confidence 467889999 7999963 321 111222211111100 001 12 3499999999999999999999
Q ss_pred CCcccccCC
Q 013175 404 NDVGSLSPG 412 (448)
Q Consensus 404 ~~~Gsi~~G 412 (448)
.++|+|.+|
T Consensus 305 ~~KG~i~~~ 313 (345)
T PRK05451 305 RNTDTITLV 313 (345)
T ss_pred CCCCeEEEE
Confidence 889999888
No 100
>PLN02599 dihydroorotase
Probab=99.50 E-value=3.6e-13 Score=130.87 Aligned_cols=256 Identities=13% Similarity=0.137 Sum_probs=141.5
Q ss_pred HHHHHHHHHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhcCC--CeeEEEEccCC--cchhhHHHHHHhcCCcCC
Q 013175 118 LLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEK--MKIRVCLFFPL--ETWSSLADLINKTGHVLS 193 (448)
Q Consensus 118 ~~~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~irv~~~~~~--~~~~~~~~~~~~~~~~~~ 193 (448)
+.+..--+.++|+|++.+|++..|..++. +.++.+++..+ +. ..+++.++... .....+.++.....
T Consensus 40 ~~~~~~~~~~gg~t~~i~MPn~~Ppv~~~----~~~~~~~~~~~-~~~~~~vdf~~~~~l~lt~~~~l~Ei~~~~~---- 110 (364)
T PLN02599 40 KLAAVVPHSARHFGRAIVMPNLKPPVTTT----ARALAYRERIM-KALPPGSSFEPLMTLYLTDNTTPEEIKAAKA---- 110 (364)
T ss_pred HHHhhhHHhcCCcCEEEECCCCCCCcCCH----HHHHHHHHHHh-hhcCCCcceEEEEEEecCCCCCHHHHHHHHH----
Confidence 44555567899999999998765554432 23334443322 23 23566554322 21112333322111
Q ss_pred CCeeeC-ceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHH-H-----H-HHH
Q 013175 194 DWVYLG-GVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRA-N-----D-LVL 265 (448)
Q Consensus 194 ~~~~~~-g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a-~-----~-~~l 265 (448)
..+. |+|+|..|.. |. ...| ..+.+.+.++++.+.+.|+++.+|++.... + + ..+
T Consensus 111 --~Gvv~gfKlyp~~~t----------t~---s~~g--v~d~~~l~~~le~~~e~G~~L~vH~E~~~~~~~~~~~E~~~i 173 (364)
T PLN02599 111 --SGVVFAVKLYPAGAT----------TN---SQAG--VTDLGKCLPVLEEMAEQGMPLLVHGEVTDPSVDIFDREKVFI 173 (364)
T ss_pred --CCCcEEEEECcccCc----------CC---Cccc--cCCHHHHHHHHHHHHhcCCEEEEecCCCcccccccccHHHHH
Confidence 2345 8999865421 10 0112 234688999999999999999999986221 1 0 011
Q ss_pred -HHHHHhHHhcCCCCCCCeEEecccCCh-hhHHHHHhCCcEEeeccccccCchhHHHH-hcCHhhhhhhhhhHH------
Q 013175 266 -DMYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQGIVASMQPQHLLDDADSARK-KLGVDRAERESYLFQ------ 336 (448)
Q Consensus 266 -~a~~~~~~~~~~~~~r~~i~H~~~~~~-~~i~~~~~~gv~~~~~P~~~~~~~~~~~~-~~g~~r~~~~~~~~~------ 336 (448)
..++.... ...+.+.+|+|++.... +.+.+.++..|++++||+|+.++.+.+.. .+++ .. +++||+|
T Consensus 174 ~r~l~~~la--~~~g~kI~i~HiSt~~~ve~v~~ak~~~vtae~tpHhL~l~~~~~~~~~~~~-~~-k~~PPlR~~~dr~ 249 (364)
T PLN02599 174 DTILAPLVQ--KLPQLKIVMEHITTMDAVEFVESCGDGNVAATVTPQHLLLNRNALFQGGLQP-HN-YCLPVLKREIHRE 249 (364)
T ss_pred HHHHHHHHH--hccCCeEEEEecChHHHHHHHHhccCCCEEEEecHHHHhcCHHHHhccCCCC-Ce-EEECCCCCHHHHH
Confidence 12221122 23467899999875443 23333332269999999999987765431 1221 12 3455544
Q ss_pred ---HHHHcCCc-eeecCCCC-CCCC---C-----HHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccC
Q 013175 337 ---SLLANNAL-LALGSDWP-VADI---N-----PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 403 (448)
Q Consensus 337 ---~~~~~Gv~-v~~gSD~p-~~~~---~-----p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~ 403 (448)
+.+..|.+ ..+|||+. .... . -+..+..++.... ....+.+ ++++++++++.|||+++|+.
T Consensus 250 aL~~al~~G~i~~~i~SDHaPh~~~~K~~~~g~~Gi~~~~~~l~~l~-----~~~~~~g-~l~~l~~~~S~npA~~~gL~ 323 (364)
T PLN02599 250 ALVKAATSGSKKFFLGTDSAPHPKRAKEASCGCAGIYSAPVALSLYA-----KAFEEAG-ALDKLEAFTSFNGPDFYGLP 323 (364)
T ss_pred HHHHHHHcCCCCEEEecCCCCCChHHhcCCCCCCCcccHHHHHHHHH-----HHHHhcC-CHHHHHHHHhHHHHHHhCCC
Confidence 56778996 79999963 2210 0 0111111111100 0011223 88999999999999999996
Q ss_pred CCcccc
Q 013175 404 NDVGSL 409 (448)
Q Consensus 404 ~~~Gsi 409 (448)
.++|+|
T Consensus 324 ~~kg~i 329 (364)
T PLN02599 324 RNTSTI 329 (364)
T ss_pred CCCCeE
Confidence 456664
No 101
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=99.48 E-value=4.8e-12 Score=126.06 Aligned_cols=175 Identities=25% Similarity=0.272 Sum_probs=104.5
Q ss_pred CCHHHHHHHHHHHHHCCC------cEEEEec-chHHHHHHHHHHHHhHHhcCCCCCCCeEEecccC-Chh---hHHHHHh
Q 013175 232 MELESLLSMTMASDKSGL------QVAIHAI-GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL-ASG---TAARFGD 300 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~------~v~iHa~-gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~-~~~---~i~~~~~ 300 (448)
.....+.++.+.++..+. .+++|.. ...++++.++. ....|. ... +++|+... +.+ +..+..+
T Consensus 166 ~~~~~~~~~~~~a~~~~~~~~~~~~~~vh~~~~~~~~~~i~~~----~~~~G~-~~~-~~~~~~~~~~~~~~~~~~~~~~ 239 (387)
T cd01308 166 PTVEELARIAAEARVGGLLGGKAGIVHIHLGDGKRALSPIFEL----IEETEI-PIT-QFLPTHINRTAPLFEQGVEFAK 239 (387)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCchHHHHHHHHH----HHhcCC-Ccc-eeECCcccCCHHHHHHHHHHHH
Confidence 346677777777776433 4777775 32333333332 232232 111 44444433 223 2334555
Q ss_pred CCcEEee----ccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCc---eeecCCCC----CCC-C--------C---
Q 013175 301 QGIVASM----QPQHLLDDADSARKKLGVDRAERESYLFQSLLANNAL---LALGSDWP----VAD-I--------N--- 357 (448)
Q Consensus 301 ~gv~~~~----~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~---v~~gSD~p----~~~-~--------~--- 357 (448)
.|+++.+ +|.++. -++. +....++.++++|+. ++++||+. +.. . .
T Consensus 240 ~G~~v~i~~~~~~~~~~---------~~~~---~~~~~l~~~~~~g~~~d~i~l~TD~~~~~p~~~~~g~~~~~g~~~~~ 307 (387)
T cd01308 240 MGGTIDLTSSIDPQFRK---------EGEV---RPSEALKRLLEQGVPLERITFSSDGNGSLPKFDENGNLVGLGVGSVD 307 (387)
T ss_pred cCCcEEEECCCCccccc---------cCcc---ChHHHHHHHHHhCCCCCcEEEEECCCCCcccCccCCeEEecCcCcHH
Confidence 6765443 333321 0100 123457788899863 69999962 111 0 0
Q ss_pred -HHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCee
Q 013175 358 -PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASI 436 (448)
Q Consensus 358 -p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v 436 (448)
.+..+..++ ...+++++++++++|.|||+++|+++ +|+|++|+.|||+|+|.+ + ++
T Consensus 308 ~~~~~~~~~v------------~~~~i~~~~al~~~T~npA~~lg~~~-~G~i~~G~~ADlvv~d~~-~---------~~ 364 (387)
T cd01308 308 TLLREVREAV------------KCGDIPLEVALRVITSNVARILKLRK-KGEIQPGFDADLVILDKD-L---------DI 364 (387)
T ss_pred HHHHHHHHHH------------HhCCCCHHHHHHHHHHHHHHHhCCCC-CCCcCCCCcCCEEEEcCC-C---------CE
Confidence 112222221 23459999999999999999999976 799999999999999986 2 36
Q ss_pred eEEEECCEEec
Q 013175 437 EATYVSGVQAY 447 (448)
Q Consensus 437 ~~t~~~G~~V~ 447 (448)
..|+++|++|+
T Consensus 365 ~~~~~~G~~v~ 375 (387)
T cd01308 365 NSVIAKGQIMV 375 (387)
T ss_pred EEEEECCEEEE
Confidence 77888888876
No 102
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=99.39 E-value=4.2e-11 Score=116.16 Aligned_cols=142 Identities=16% Similarity=0.164 Sum_probs=105.0
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccC--ChhhHHHHHhCCcEEeeccc
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL--ASGTAARFGDQGIVASMQPQ 310 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~--~~~~i~~~~~~gv~~~~~P~ 310 (448)
+.+.++++++.|+++|+++++|+.+.........+++. .| ..+|.|+..+ ++++++++++.|+.+++||.
T Consensus 170 ~~~~~~~~~~~A~~~g~~i~~Ha~E~~~~~~~~~~~~~----~g----~~ri~Hg~~l~~~~~~i~~l~~~gi~v~~cP~ 241 (324)
T TIGR01430 170 PPPDFVRAFAIARELGLHLTVHAGELGGPESVREALDD----LG----ATRIGHGVRALEDPELLKRLAQENITLEVCPT 241 (324)
T ss_pred CHHHHHHHHHHHHHCCCCeEEecCCCCChHHHHHHHHH----cC----chhcchhhhhccCHHHHHHHHHcCceEEECCc
Confidence 47889999999999999999999753111122222222 23 2479999988 56799999999999999999
Q ss_pred cccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCC-CCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHH
Q 013175 311 HLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA-DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDAL 389 (448)
Q Consensus 311 ~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~-~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al 389 (448)
+..... .++ . ....|++.++++|+++++|||.|.. ..+++.++..++.. .++|+.+ |
T Consensus 242 Sn~~l~-----~~~-~---~~~~pi~~l~~~Gv~v~igTD~~~~~~~~l~~e~~~a~~~------------~~l~~~e-l 299 (324)
T TIGR01430 242 SNVALG-----VVK-S---LAEHPLRRFLEAGVKVTLNSDDPAYFGSYLTEEYEIAAKH------------AGLTEEE-L 299 (324)
T ss_pred cccccc-----ccC-C---cccChHHHHHHCCCEEEECCCCCcccCCCHHHHHHHHHHH------------cCCCHHH-H
Confidence 743211 001 0 1357999999999999999998743 34777888877643 2589999 8
Q ss_pred HHHhHHHHHHcccCC
Q 013175 390 IAHTLSAARACFLEN 404 (448)
Q Consensus 390 ~~~T~n~A~~~g~~~ 404 (448)
+.+|.|+++..+..+
T Consensus 300 ~~~~~na~~~~f~~~ 314 (324)
T TIGR01430 300 KQLARNALEGSFLSD 314 (324)
T ss_pred HHHHHHHHHHhCCCH
Confidence 899999999988753
No 103
>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A. Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably.
Probab=99.37 E-value=2.7e-11 Score=121.91 Aligned_cols=68 Identities=19% Similarity=0.197 Sum_probs=55.0
Q ss_pred CCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC-C--hhhh--ccCeeeEEEECCEEecC
Q 013175 380 SERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-D--FAAE--VSASIEATYVSGVQAYP 448 (448)
Q Consensus 380 ~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~-~--~~~~--~~~~v~~t~~~G~~V~~ 448 (448)
+..+|+++++++.|.|||+++|+.+ +|+|++|+.|||+|+|.++.. + ...+ ....+..||++|++|++
T Consensus 427 ~Re~sL~EI~~mtTanPAkaLGL~d-kG~L~pGa~ADIaI~D~~~~~~~~~~~~v~~~~~~v~~Tik~G~vV~~ 499 (556)
T TIGR03121 427 DREYSLYEIAIMTRAGPAKLLGLTD-RGHLGVGADADIAVYDINPDDVDTDYADVEKAFSTALYVFKDGEIVVK 499 (556)
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCC-CCCcCCCCcCCEEEEeCcccccCCchHHHhhccCCccEEEECCEEEEE
Confidence 4469999999999999999999976 799999999999999976432 1 1112 13468999999999873
No 104
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.
Probab=99.37 E-value=1.9e-11 Score=120.80 Aligned_cols=52 Identities=35% Similarity=0.551 Sum_probs=47.2
Q ss_pred CCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCeeeEEEECC
Q 013175 382 RISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSG 443 (448)
Q Consensus 382 ~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v~~t~~~G 443 (448)
.++++++++++|.|||+++|++++.|+|++|+.|||+++|.+. +|..||++|
T Consensus 323 ~l~~~~al~~aT~npA~~lg~~~~~G~i~~G~~ADlvv~d~~~----------~v~~~~~~G 374 (374)
T cd00854 323 GCPLEEAVRMASLNPAKLLGLDDRKGSLKPGKDADLVVLDDDL----------NVKATWING 374 (374)
T ss_pred CCCHHHHHHHHhHHHHHHcCCCCCcCCcCCCCcCCEEEECCCC----------cEEEEEeCc
Confidence 5899999999999999999998778999999999999999753 488888887
No 105
>PRK10027 cryptic adenine deaminase; Provisional
Probab=99.36 E-value=1e-10 Score=120.25 Aligned_cols=170 Identities=20% Similarity=0.201 Sum_probs=111.6
Q ss_pred cccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEee
Q 013175 228 GLQVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASM 307 (448)
Q Consensus 228 g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~ 307 (448)
|...-+++.+.++.. + +|.++.-|+.+-.. ..|++|..+ | ..-.|-+...++.++| .++|..+.+
T Consensus 191 ~V~~~d~~~~~ki~~-~--~~~~idGH~p~l~g--~~L~ay~aa----G-----i~sDHE~~t~eea~ek-lr~Gm~v~i 255 (588)
T PRK10027 191 GVISGQNALLDKLDA-F--RHLTLDGHCPGLGG--KELNAYIAA----G-----IENCHESYQLEEGRRK-LQLGMSLMI 255 (588)
T ss_pred ccccCCHHHHHHHHH-h--CCCceECCCCCCCh--HHHHHHHHc----C-----CCCCcccCCHHHHHHH-HHCCCEEEE
Confidence 444446777777763 3 89999999986443 456666443 2 3455755544444555 467999998
Q ss_pred ccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCCCC------CHHHHHHHHHcCCCCCCCCCCCCCC
Q 013175 308 QPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADI------NPLCAIRTAMKRIPPGWDNAWIPSE 381 (448)
Q Consensus 308 ~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~------~p~~~~~~a~~r~~~~~~~~~~~~~ 381 (448)
...+...+.+.. .+-+.+. .--.+++.||.-. +. .....++.++. ..
T Consensus 256 RegS~~~nl~~l------------~~~~~~~--~~~~~~l~TDd~~-~~~l~~~Ghi~~~vr~av~------------~~ 308 (588)
T PRK10027 256 REGSAARNLNAL------------APLINEF--NSPQCMLCTDDRN-PWEIAHEGHIDALIRRLIE------------QH 308 (588)
T ss_pred eCCccccCHHHH------------HHHhhcc--CCCeEEEEcCCCC-hHHHHhccCHHHHHHHHHH------------Hc
Confidence 877654432211 1111111 1245789999632 11 12244444442 24
Q ss_pred CCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCeeeEEEECCEEecC
Q 013175 382 RISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 448 (448)
Q Consensus 382 ~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v~~t~~~G~~V~~ 448 (448)
++++++|++++|.|||+.+|+++ +|+|+||+.|||+++|... +..+..||++|++|++
T Consensus 309 Gi~~~~Ai~mAT~nPA~~lgl~d-~G~IapG~~ADlvvld~l~--------~~~v~~v~~~G~~v~~ 366 (588)
T PRK10027 309 NVPLHVAYRVASWSTARHFGLNH-LGLLAPGKQADIVLLSDAR--------KVTVQQVLVKGEPIDA 366 (588)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCC-CcccCCCCcCCEEEEccCC--------CceEEEEEECCEEeec
Confidence 68999999999999999999986 7999999999999998521 2358889999999873
No 106
>PRK09358 adenosine deaminase; Provisional
Probab=99.35 E-value=4.7e-11 Score=116.62 Aligned_cols=142 Identities=17% Similarity=0.177 Sum_probs=102.5
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCC--hhhHHHHHhCCcEEeecc
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQP 309 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~--~~~i~~~~~~gv~~~~~P 309 (448)
.+.+.++++++.|++.|+++++|+.+........++++. .| ..+|.|+..++ ++.++++++.|+.+++||
T Consensus 179 ~~~~~~~~~~~~A~~~g~~~~~H~~E~~~~~~~~~al~~----lg----~~ri~Hg~~l~~~~~~~~~l~~~gi~v~~cP 250 (340)
T PRK09358 179 FPPSKFARAFDRARDAGLRLTAHAGEAGGPESIWEALDE----LG----AERIGHGVRAIEDPALMARLADRRIPLEVCP 250 (340)
T ss_pred CCHHHHHHHHHHHHHCCCCeEEcCCCCCchhHHHHHHHH----cC----CcccchhhhhccCHHHHHHHHHcCCeEEECC
Confidence 357889999999999999999999743211222233322 23 24689999885 567999999999999999
Q ss_pred ccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCC-CCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHH
Q 013175 310 QHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDA 388 (448)
Q Consensus 310 ~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~-~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~a 388 (448)
.+... +|.... -...|++.++++|++|++|||.|. ...+++.++..+... .++|++++
T Consensus 251 ~Sn~~--------l~~~~~-~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~e~~~~~~~------------~~l~~~el 309 (340)
T PRK09358 251 TSNVQ--------TGAVPS-LAEHPLKTLLDAGVRVTINTDDPLVFGTTLTEEYEALAEA------------FGLSDEDL 309 (340)
T ss_pred Ccccc--------ccccCC-cccChHHHHHHCCCEEEECCCCCcccCCCHHHHHHHHHHH------------hCCCHHHH
Confidence 97432 221000 135799999999999999999874 356788888776542 25899884
Q ss_pred HHHHhHHHHHHcccC
Q 013175 389 LIAHTLSAARACFLE 403 (448)
Q Consensus 389 l~~~T~n~A~~~g~~ 403 (448)
..++.|+.+...++
T Consensus 310 -~~l~~nai~~sf~~ 323 (340)
T PRK09358 310 -AQLARNALEAAFLS 323 (340)
T ss_pred -HHHHHHHHHHHCCC
Confidence 66688998887765
No 107
>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.
Probab=99.34 E-value=5.3e-11 Score=119.22 Aligned_cols=67 Identities=19% Similarity=0.122 Sum_probs=56.2
Q ss_pred CCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC-Chhhhc-----cCeeeEEEECCEEec
Q 013175 380 SERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEV-----SASIEATYVSGVQAY 447 (448)
Q Consensus 380 ~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~-~~~~~~-----~~~v~~t~~~G~~V~ 447 (448)
+..+|++++++++|.|||+++|+++ +|+|++|+.|||+|+|.++.. +++++. ..+|..||++|++||
T Consensus 424 ~reLSLeei~~mtT~nPAKiLGL~~-kG~L~~G~~ADLvIfD~n~~~v~~~dl~s~~~~~gkV~~Tiv~GkvVv 496 (541)
T cd01304 424 DREYSLYEIAIMTRAGPAKLLGLSD-KGHLGVGADADIAIYDDDPDQVDPSDYEKVEKAFSRAAYVLKDGEIVV 496 (541)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCCcCCEEEEeCCcCccCchhhcCceeecCcEEEEEECCEEEE
Confidence 4458999999999999999999974 799999999999999988654 333332 347999999999987
No 108
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=99.31 E-value=1.7e-10 Score=104.59 Aligned_cols=151 Identities=19% Similarity=0.212 Sum_probs=102.1
Q ss_pred HHHHHHHHHHCCCcEEEEecchHHH-HHHHHHHHHhHHhcCCCCCCCeEEecccCCh-----------hhHHHHHhCCcE
Q 013175 237 LLSMTMASDKSGLQVAIHAIGDRAN-DLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-----------GTAARFGDQGIV 304 (448)
Q Consensus 237 l~~~~~~a~~~g~~v~iHa~gd~a~-~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~-----------~~i~~~~~~gv~ 304 (448)
++...+.|++.++|+++|.-+.... +++++. ......|.||..--+ ..++|.++.||.
T Consensus 174 l~la~~ia~~~klPlmvHigePp~~~dEvler----------L~~GDIitHcfngkpn~~l~~dg~vr~~vrra~erGV~ 243 (386)
T COG3964 174 LTLALRIANDLKLPLMVHIGEPPVLMDEVLER----------LRRGDIITHCFNGKPNTILTDDGVVRAEVRRARERGVI 243 (386)
T ss_pred HHHHHHHHhhcCCceEEecCCCCccHHHHHHh----------ccCCceeeeeccCCCCCccccchhHHHHHHHHHhcceE
Confidence 5566778889999999998765433 223322 223578999974321 356788889998
Q ss_pred EeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCC-ceeecCCCC-CCCC-CHHHHHHHHHcCCCCCCCCCCCCCC
Q 013175 305 ASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNA-LLALGSDWP-VADI-NPLCAIRTAMKRIPPGWDNAWIPSE 381 (448)
Q Consensus 305 ~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv-~v~~gSD~p-~~~~-~p~~~~~~a~~r~~~~~~~~~~~~~ 381 (448)
+.+--.-..++. .-.+.++..|+ +..++||-. .+.. -|...+..-++..- .-
T Consensus 244 fD~ghG~asfsf----------------~vAr~aia~GllP~~ISSDlh~~~~~n~Pv~dla~~mSKll---------al 298 (386)
T COG3964 244 FDAGHGRASFSF----------------NVARRAIANGLLPDIISSDLHTITKLNGPVYDLAWIMSKLL---------AL 298 (386)
T ss_pred EEccCCcceeeH----------------HHHHHHHhcCCCcceeeccceeeeecCchHHHHHHHHHHHH---------Hc
Confidence 876443221111 12355777886 679999943 2222 25444444333211 23
Q ss_pred CCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCC
Q 013175 382 RISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTS 423 (448)
Q Consensus 382 ~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d 423 (448)
++++.+.++++|.|||..+++. .+|+|+||..|||+|++..
T Consensus 299 gmpl~~Vi~avT~npA~~i~l~-~~gtLa~G~~aD~tvf~lk 339 (386)
T COG3964 299 GMPLTDVINAVTHNPAVLIGLA-EIGTLAPGAFADITVFKLK 339 (386)
T ss_pred CCcHHHHHHHHhcCHHHHhCcc-ccCccCCCcccceEEEEec
Confidence 5899999999999999999998 4899999999999999754
No 109
>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]
Probab=99.29 E-value=2.9e-10 Score=113.08 Aligned_cols=164 Identities=22% Similarity=0.245 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccccC
Q 013175 235 ESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLD 314 (448)
Q Consensus 235 ~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~ 314 (448)
+.+-..++.+++.|.+|.-||-|-.. ..|++|..+ | .+-.|=+. +.|+..+--++|..+.+.-.+...
T Consensus 189 ~~~l~kl~a~~~~~k~VdGHapgl~g--~~Ln~Y~aa----G-----i~tDHE~~-t~EEa~~klr~Gm~i~iReGS~a~ 256 (584)
T COG1001 189 PDMLAKLEAARKAGKPVDGHAPGLSG--KELNAYIAA----G-----ISTDHEST-TAEEALEKLRLGMKIMIREGSAAK 256 (584)
T ss_pred HHHHHHHHHHHHcCCeecccCCCCCh--HHHHHHHhc----C-----CCcCcccC-CHHHHHHHHhCCcEEEEEcCchhh
Confidence 44557788899999999999987553 346666543 2 34457444 554444445679999887655432
Q ss_pred chhHHHHhcCHhhhhhhhhhHHHHHHcC-CceeecCCCCCCC-----CCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHH
Q 013175 315 DADSARKKLGVDRAERESYLFQSLLANN-ALLALGSDWPVAD-----INPLCAIRTAMKRIPPGWDNAWIPSERISLTDA 388 (448)
Q Consensus 315 ~~~~~~~~~g~~r~~~~~~~~~~~~~~G-v~v~~gSD~p~~~-----~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~a 388 (448)
+.. .-++.+-+.| -.+++.||--... ...-..++.|+ ++++++.+|
T Consensus 257 dl~---------------~l~~~i~e~~~~~~~lcTDD~~p~dl~~eGhld~~vR~Ai-------------~~Gv~p~~a 308 (584)
T COG1001 257 DLA---------------ALLPAITELGSRRVMLCTDDRHPDDLLEEGHLDRLVRRAI-------------EEGVDPLDA 308 (584)
T ss_pred hHH---------------HHHHHHhhcCCceEEEECCCCChhHhhhcCCHHHHHHHHH-------------HcCCCHHHH
Confidence 211 1123334445 4688899852211 11223344444 457999999
Q ss_pred HHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCeeeEEEECCEEec
Q 013175 389 LIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 447 (448)
Q Consensus 389 l~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v~~t~~~G~~V~ 447 (448)
++|+|+|||+.+|+++ +|.|+||..||||+++ ++.+.+|..|+++|++|.
T Consensus 309 ~qmAtiN~A~~~gl~~-~G~iAPG~~ADlvi~~--------DL~~~~v~~V~~~G~~v~ 358 (584)
T COG1001 309 YQMATINPAEHYGLDD-LGLIAPGRRADLVILE--------DLRNFKVTSVLIKGRVVA 358 (584)
T ss_pred HHHHhcCHHHHcCCcc-cccccCCccccEEEEc--------ccccCceeEEEECCEEEe
Confidence 9999999999999998 9999999999999997 344567999999999986
No 110
>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]
Probab=99.27 E-value=4.9e-10 Score=105.17 Aligned_cols=271 Identities=17% Similarity=0.185 Sum_probs=149.8
Q ss_pred HHHHhcCcceeEeCccCCC-----CCccccchHHHHHHHHHHHhcCCCeeEEEEccCC--cchhhHHHHHHhcCCcCCCC
Q 013175 123 NLALSRGVTTVVDFGRYYP-----GESVQLSWEDFADVYQWASYSEKMKIRVCLFFPL--ETWSSLADLINKTGHVLSDW 195 (448)
Q Consensus 123 ~~~~~~GvTtv~d~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~--~~~~~~~~~~~~~~~~~~~~ 195 (448)
.++++.||||+.--+.... .+.++..| .+.+.++....+++.+.+..-. .....+.+.+..
T Consensus 145 ~~Al~sGiTtmiGGGtGpa~Gt~aTT~TpG~w----~i~rMl~a~d~~p~N~g~lgKGn~s~~~~L~Eqi~a-------- 212 (568)
T COG0804 145 EEALASGITTMIGGGTGPADGTNATTCTPGPW----HIARMLQAADGLPMNIGFLGKGNASNPAPLAEQIEA-------- 212 (568)
T ss_pred HHHHhcCcEEEecCccCCCCCcccccccCCHH----HHHHHHHhhhcCceeeEEeecCCCCCchhHHHHHhh--------
Confidence 4678899999975432110 11122334 3444555567799999876422 112233343322
Q ss_pred eeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEec---chHHHHHHHHHHHHhH
Q 013175 196 VYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAI---GDRANDLVLDMYKSVV 272 (448)
Q Consensus 196 ~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~---gd~a~~~~l~a~~~~~ 272 (448)
...|+|+- +.|- .++..+..++..|.++++||++|.. +..-++..+.+++
T Consensus 213 -Ga~GlKlH-------------EDWG----------~TpaaI~~~L~VAD~~DvqVaiHtDTLNEsGfvEdTi~A~~--- 265 (568)
T COG0804 213 -GAIGLKLH-------------EDWG----------ATPAAIDTCLSVADEYDVQVAIHTDTLNESGFVEDTIAAIK--- 265 (568)
T ss_pred -ccceeEee-------------cccC----------CCHHHHHHHHhhhhhhceEEEEeecccccccchHhHHHHhc---
Confidence 12355643 3331 3578899999999999999999984 3334555555542
Q ss_pred HhcCCCCCCCeEEecccC----ChhhHHHHHhCCcEE-eeccccccC--chhHH----H------H------hcCHhhhh
Q 013175 273 VTTGKRDQRFRIEHAQHL----ASGTAARFGDQGIVA-SMQPQHLLD--DADSA----R------K------KLGVDRAE 329 (448)
Q Consensus 273 ~~~~~~~~r~~i~H~~~~----~~~~i~~~~~~gv~~-~~~P~~~~~--~~~~~----~------~------~~g~~r~~ 329 (448)
+ +..|--|..-. .++-++-....+|-+ ++.|.--+. ..+.. . . .+...|..
T Consensus 266 ---g---RtIHtyHtEGAGGGHAPDiikv~~~~NvLPsSTNPT~PytvNT~~EhlDMlMVcHhL~p~ipeDvaFAeSRIR 339 (568)
T COG0804 266 ---G---RTIHTYHTEGAGGGHAPDIIKVAGQPNVLPSSTNPTRPYTVNTIDEHLDMLMVCHHLDPRIPEDVAFAESRIR 339 (568)
T ss_pred ---C---ceeEEeeccCCCCCCccHHHHHccCCCcCcCCCCCCCCcccccHHHhhhhhhhhccCCCCCcchhhhhhhccc
Confidence 2 22333443322 244555555555543 344431110 00000 0 0 01111110
Q ss_pred -hhhhhHHHHHHcCCceeecCCCCCCC------CCHHHHHHHH-HcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcc
Q 013175 330 -RESYLFQSLLANNALLALGSDWPVAD------INPLCAIRTA-MKRIPPGWDNAWIPSERISLTDALIAHTLSAARACF 401 (448)
Q Consensus 330 -~~~~~~~~~~~~Gv~v~~gSD~p~~~------~~p~~~~~~a-~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g 401 (448)
.....=.-|.+.|+...++||+-... ..-|...... ..|........- ....-...-+..||+|||-..|
T Consensus 340 ~eTIAAEdiLhDmGafSmisSDSQAMGRvGEvi~RtwQtA~kmK~qrG~L~~d~~~--nDN~RvkRYiaKyTINPAIthG 417 (568)
T COG0804 340 PETIAAEDILHDMGAFSMISSDSQAMGRVGEVITRTWQTADKMKKQRGALPEDAGG--NDNFRVKRYIAKYTINPAITHG 417 (568)
T ss_pred hhhhhHHHHHhhccceEEeccchHhhhccchhhhhHHHHHHHHHHhcCCCCCCCCC--CccHHHhhhhhheecCHHHhcc
Confidence 11122233789999999999975221 1123222211 122221111111 1224566778999999999999
Q ss_pred cCCCcccccCCCcccEEEecCCCCCChhhhccCeeeEEEECCEEec
Q 013175 402 LENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 447 (448)
Q Consensus 402 ~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v~~t~~~G~~V~ 447 (448)
+.+.+||+|+||.||||+|++-.| ..++..++++|-+.+
T Consensus 418 is~~vGSvEvGK~ADlVLW~PaFF-------GvKP~~vlkgG~ia~ 456 (568)
T COG0804 418 ISHEVGSVEVGKLADLVLWDPAFF-------GVKPELVLKGGMIAW 456 (568)
T ss_pred cchhccceeccceeeeeeechhhc-------CCCcceEEecceeee
Confidence 999999999999999999997544 346777888887764
No 111
>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.
Probab=99.22 E-value=1.3e-09 Score=107.61 Aligned_cols=172 Identities=13% Similarity=0.072 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHCCCcEEEEecchHH-HHHHHHHHHHhHHhcCCCCCCCeEEecccCCh-----------hhHHHHHhC
Q 013175 234 LESLLSMTMASDKSGLQVAIHAIGDRA-NDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-----------GTAARFGDQ 301 (448)
Q Consensus 234 ~~~l~~~~~~a~~~g~~v~iHa~gd~a-~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~-----------~~i~~~~~~ 301 (448)
+..+.+.+..+ +.+++|.+|+....+ ...++..+ ..| ..+.||....+ +.+....+.
T Consensus 165 ~~~~~~~l~~~-~~~~pv~vH~~~a~~~~~~i~~~~-----~~g-----~~~~H~fng~~~~~~r~~g~~~~~~~~~l~~ 233 (365)
T TIGR03583 165 PLEIAKQIQQE-NLELPLMVHIGSAPPELDEILALM-----EKG-----DVLTHCFNGKPNGILRETGEVKPSVLEAYNR 233 (365)
T ss_pred HHHHHHHHHHh-cCCCcEEEEeCCCccCHHHHHHHh-----cCC-----CeeeeeecCCCCCCCCCcchHHHHHHHHHhC
Confidence 44455555544 789999999976432 22222221 112 26899876655 667777788
Q ss_pred CcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcC-CceeecCCCCCC-----CCC-HHHHHHHHHcCCCCCCC
Q 013175 302 GIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANN-ALLALGSDWPVA-----DIN-PLCAIRTAMKRIPPGWD 374 (448)
Q Consensus 302 gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~G-v~v~~gSD~p~~-----~~~-p~~~~~~a~~r~~~~~~ 374 (448)
|+.+.++-....+... . ...+...+ +.++.++|.+.. |.. ....+...+
T Consensus 234 G~i~d~~hg~~~~~~~-------------~---~~~~~~~~~~~~td~~d~~~~~~~~gp~~~l~~~~~~~~-------- 289 (365)
T TIGR03583 234 GVILDVGHGTASFSFH-------------V---AEKAKRAGIFPDTISTDIYIRNRINGPVYSLATVMSKFL-------- 289 (365)
T ss_pred eEEEEeCCCCCCchHH-------------H---HHHHHhCCCCCcccccccccCCCccCccccHHHHHHHHH--------
Confidence 9988875322111110 0 11122234 334566665432 111 222333322
Q ss_pred CCCCCCCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC-C-hh----hhc---cCeeeEEEECCEE
Q 013175 375 NAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-D-FA----AEV---SASIEATYVSGVQ 445 (448)
Q Consensus 375 ~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~-~-~~----~~~---~~~v~~t~~~G~~ 445 (448)
..+++++++++++|.|||+++|+++ +|+|++|+.|||+|+|.+.-. . ++ .+. ...+..|+++|+.
T Consensus 290 -----~~g~~~~ea~~~~t~npa~~~gl~~-~g~i~~g~~ad~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 363 (365)
T TIGR03583 290 -----ALGYSLEEVIEKVTKNAAEILKLTQ-KGRLQEGYDADLTIFTVKAEPKKLTDSEGDSRIAEEQIKPLAVIIGGEY 363 (365)
T ss_pred -----HcCCCHHHHHHHHHHHHHHHhCCCC-CCCcCCCCcccEEEEecCCCCceeecCCCCEEEeccccceEEEEECCEE
Confidence 1258999999999999999999975 799999999999999964322 1 11 111 2356889999987
Q ss_pred e
Q 013175 446 A 446 (448)
Q Consensus 446 V 446 (448)
.
T Consensus 364 ~ 364 (365)
T TIGR03583 364 Y 364 (365)
T ss_pred e
Confidence 4
No 112
>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional
Probab=99.11 E-value=1.4e-08 Score=100.17 Aligned_cols=58 Identities=31% Similarity=0.419 Sum_probs=52.6
Q ss_pred CCCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCeeeEEEECCEEec
Q 013175 380 SERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 447 (448)
Q Consensus 380 ~~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v~~t~~~G~~V~ 447 (448)
..++++++|++++|.|||+.+|+++.+|+|++|+.|||+|+|.+. +|..||++|+.+|
T Consensus 323 ~~~~~~~eal~~aT~npA~~lgl~~~~G~i~~G~~ADlvvld~~~----------~v~~v~~~G~~~~ 380 (382)
T PRK11170 323 HVGIALDEALRMATLYPARAIGVDKRLGSIEAGKVANLTAFTRDF----------KITKTIVNGNEVV 380 (382)
T ss_pred hcCCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEECCCC----------cEEEEEECCEEee
Confidence 356899999999999999999998778999999999999999752 5899999999987
No 113
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=99.06 E-value=2.9e-08 Score=97.73 Aligned_cols=54 Identities=35% Similarity=0.463 Sum_probs=48.8
Q ss_pred CCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCeeeEEEECCE
Q 013175 381 ERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGV 444 (448)
Q Consensus 381 ~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v~~t~~~G~ 444 (448)
..++++++++++|.|||+.+|+++++|+|++|+.|||+|+|.+. +|..||++|+
T Consensus 327 ~~~~~~eal~~aT~npA~~lgl~~~~G~i~~G~~ADlvv~d~~~----------~v~~t~~~G~ 380 (380)
T TIGR00221 327 TNISLTDAARMSSLNPARALGIDDRLGSVTVGKDANLVVFTPDF----------EVILTIVNGN 380 (380)
T ss_pred hCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCcCCEEEECCCC----------CEEEEEeCCC
Confidence 45899999999999999999998767999999999999999753 5889999985
No 114
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F ....
Probab=99.04 E-value=2e-09 Score=102.58 Aligned_cols=76 Identities=33% Similarity=0.363 Sum_probs=59.0
Q ss_pred hhhhHHHHHHcCCceeecCCCCC----CCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccCCCc
Q 013175 331 ESYLFQSLLANNALLALGSDWPV----ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDV 406 (448)
Q Consensus 331 ~~~~~~~~~~~Gv~v~~gSD~p~----~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~~~~ 406 (448)
...+++.++++|++++++||++. .+.+.+..+...+. ..++++++|++++|.|||+++|+++++
T Consensus 225 ~~~~~~~l~~~Gv~~~l~sD~~~~~~~~~~~~~~~~~~~~~------------~~gl~~~~al~~~T~~pA~~lgl~~~~ 292 (304)
T PF13147_consen 225 DRAALRELLEAGVPVALGSDHAPSSTEGSGDLLHEAMRLAV------------RAGLSPEEALRAATSNPARILGLDDDK 292 (304)
T ss_dssp HHHHHHHHHHTTSSEEEEE-BBTTTTTCTTTHHHHHHHHHH------------HTSSTHHHHHHHHTHHHHHHTTBTTTS
T ss_pred hhHHHHHHHhCCCeEEEEcCCcccccccccccchhhhhHHh------------hcCCCHHHHHHHHHHHHHHHhCCCCCC
Confidence 34578899999999999999864 33344444433332 136899999999999999999997789
Q ss_pred ccccCCCcccEE
Q 013175 407 GSLSPGKIADFV 418 (448)
Q Consensus 407 Gsi~~Gk~ADlv 418 (448)
|+|++||+||||
T Consensus 293 G~i~~G~~ADlv 304 (304)
T PF13147_consen 293 GSIAPGKDADLV 304 (304)
T ss_dssp SSTSTTSB-EEE
T ss_pred ccCCCCCCCCcC
Confidence 999999999997
No 115
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=98.94 E-value=1.5e-09 Score=103.52 Aligned_cols=58 Identities=34% Similarity=0.589 Sum_probs=53.3
Q ss_pred CCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCeeeEEEECCEEecC
Q 013175 381 ERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 448 (448)
Q Consensus 381 ~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v~~t~~~G~~V~~ 448 (448)
..++++||++|+|.+||+++|+++++|+|++|++||||+||.|. +|..||++|+++|+
T Consensus 323 ~~~~~~eAv~maS~~PA~~lgl~~~~G~i~~G~~Adlvvld~d~----------~v~~T~i~G~~~~~ 380 (380)
T COG1820 323 GGISLAEAVRMASLNPAKALGLDDRLGSIKPGKDADLVVLDDDL----------NVKATWINGEKVFN 380 (380)
T ss_pred hCCCHHHHHHHhhhhHHHHhCCcCcccccCCCcccCEEEECCCC----------cEEEEEECCEEeeC
Confidence 35799999999999999999999989999999999999999764 58999999999874
No 116
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=98.76 E-value=2e-06 Score=82.61 Aligned_cols=140 Identities=16% Similarity=0.115 Sum_probs=97.3
Q ss_pred CHHHHHHHHHHHHHCC-CcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCCh--hhHHHHHhCCcEEeecc
Q 013175 233 ELESLLSMTMASDKSG-LQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS--GTAARFGDQGIVASMQP 309 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g-~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~--~~i~~~~~~gv~~~~~P 309 (448)
+...+...+..|++.| +++.+||-+........+++.. . ..+|.|+..+.. +.++++++.++.+++||
T Consensus 151 ~~~~f~~~~~~ar~~g~l~~t~HaGE~~~~~~v~~~~~~--------~-~~RIgHg~~~~~~p~~~~~l~~~~i~ie~CP 221 (305)
T cd00443 151 PLRDFYSYYEYARRLGLLGLTLHCGETGNREELLQALLL--------L-PDRIGHGIFLLKHPELIYLVKLRNIPIEVCP 221 (305)
T ss_pred CHHHHHHHHHHHHHcCCcceEEeecCCCChHHHHHHHHh--------c-cceeeceEecCCCHHHHHHHHHcCCEEEECc
Confidence 4567889999999999 9999999754222223333321 1 568999998876 99999999999999999
Q ss_pred ccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCC-CCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHH
Q 013175 310 QHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA-DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDA 388 (448)
Q Consensus 310 ~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~-~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~a 388 (448)
.+... ++.... -...|++.++++|++++++||.|.. ..+...++..+... .++|.++.
T Consensus 222 ~SN~~--------~~~~~~-~~~hP~~~~~~~G~~v~i~TDd~~~~~~~l~~E~~~~~~~------------~~l~~~~l 280 (305)
T cd00443 222 TSNVV--------LGTVQS-YEKHPFMRFFKAGLPVSLSTDDPGIFGTSLSEEYSLAAKT------------FGLTFEDL 280 (305)
T ss_pred chhhh--------hcCCCC-hhhChHHHHHHCCCeEEEeCCCCcccCCChHHHHHHHHHH------------cCcCHHHH
Confidence 97332 111000 1246899999999999999999843 34566666655432 23788886
Q ss_pred HHHHhHHHHHHcccC
Q 013175 389 LIAHTLSAARACFLE 403 (448)
Q Consensus 389 l~~~T~n~A~~~g~~ 403 (448)
.++. .|+-+..+.+
T Consensus 281 ~~l~-~nsi~~sf~~ 294 (305)
T cd00443 281 CELN-RNSVLSSFAK 294 (305)
T ss_pred HHHH-HHHHHHhcCC
Confidence 6554 5666655553
No 117
>PTZ00124 adenosine deaminase; Provisional
Probab=98.68 E-value=4.5e-06 Score=81.41 Aligned_cols=138 Identities=14% Similarity=0.101 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHCCCcEEEEecch---HHHHHHHHHHHHhHHhcCCCCCCCeEEecccC--ChhhHHHHHhCCcEEeeccc
Q 013175 236 SLLSMTMASDKSGLQVAIHAIGD---RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL--ASGTAARFGDQGIVASMQPQ 310 (448)
Q Consensus 236 ~l~~~~~~a~~~g~~v~iHa~gd---~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~--~~~~i~~~~~~gv~~~~~P~ 310 (448)
.+.++++.|++.|+++.+||-+. .......+++... + ..+|.|+..+ +++.++++++.+|.+++||.
T Consensus 207 ~f~~~f~~Ar~~Gl~~t~HaGE~~~~~~~~~v~~ai~~l----~----~~RIGHG~~~~~d~~l~~~l~~~~I~lEvCPt 278 (362)
T PTZ00124 207 PFKDIFDYVREAGVNLTVHAGEDVTLPNLNTLYSAIQVL----K----VKRIGHGIRVAESQELIDMVKEKDILLEVCPI 278 (362)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCCCCCcchhHHHHHHHh----C----CCccccccccCCCHHHHHHHHHcCCeEEECCc
Confidence 36788999999999999999642 1112233333322 2 4689999876 57899999999999999999
Q ss_pred cccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCC-CCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHH
Q 013175 311 HLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDAL 389 (448)
Q Consensus 311 ~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~-~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al 389 (448)
+..... .+.. -...|++.++++|++++++||.|. ...+...+...+.. ..++|.++..
T Consensus 279 SN~~~~-----~v~~----~~~HPi~~l~~~Gv~v~InTDDp~~~~t~l~~Ey~~~~~------------~~gls~~~l~ 337 (362)
T PTZ00124 279 SNVLLN-----NAKS----MDTHPIRKLYDAGVKVSVNSDDPGMFLTNINDDYEELYT------------HLNFTLADFM 337 (362)
T ss_pred chhhhh-----cCCc----hhhHHHHHHHHCCCcEEEeCCCccccCCChhHHHHHHHH------------HcCCCHHHHH
Confidence 853221 1111 124689999999999999999884 33444455444432 2358888887
Q ss_pred HHHhHHHHHHcccC
Q 013175 390 IAHTLSAARACFLE 403 (448)
Q Consensus 390 ~~~T~n~A~~~g~~ 403 (448)
++ +.|+.+..+++
T Consensus 338 ~l-~~nai~asF~~ 350 (362)
T PTZ00124 338 KM-NEWALEKSFLD 350 (362)
T ss_pred HH-HHHHHHHhcCC
Confidence 76 55776666554
No 118
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.
Probab=98.62 E-value=2.1e-06 Score=82.14 Aligned_cols=148 Identities=11% Similarity=0.046 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecch-HHHHHHHHHHHHhHHhcCCCCCCCeEEecc-cCChhhHHHHHhCCcEEeeccc
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-HLASGTAARFGDQGIVASMQPQ 310 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~gd-~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~-~~~~~~i~~~~~~gv~~~~~P~ 310 (448)
..+.+++.++.|.+.|+||++|+... .+....++.+.+ .+....+..+.||. ..+.+.+.++.+.|+.++++..
T Consensus 134 q~~~f~~~~~lA~~~~~Pv~iH~~~~~~~~~~~l~~l~~----~g~~~~~~vi~H~~~~~~~~~~~~~~~~G~~i~~~~~ 209 (293)
T cd00530 134 EEKVLRAAARAQKETGVPISTHTQAGLTMGLEQLRILEE----EGVDPSKVVIGHLDRNDDPDYLLKIAALGAYLEFDGI 209 (293)
T ss_pred HHHHHHHHHHHHHHHCCeEEEcCCCCccccHHHHHHHHH----cCCChhheEEeCCCCCCCHHHHHHHHhCCCEEEeCCC
Confidence 35678899999999999999998642 234444444432 24333356799998 4567889999999999887754
Q ss_pred cccCchhHHHHhcCHhhhhhhhhhHHHHHHcCC--ceeecCCCCCCCC--------CHHHHHHHHHcCCCCCCCCCCCCC
Q 013175 311 HLLDDADSARKKLGVDRAERESYLFQSLLANNA--LLALGSDWPVADI--------NPLCAIRTAMKRIPPGWDNAWIPS 380 (448)
Q Consensus 311 ~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv--~v~~gSD~p~~~~--------~p~~~~~~a~~r~~~~~~~~~~~~ 380 (448)
...... ...+.. +....++++++.|. .+.++||+|..+. .|...+...... ...
T Consensus 210 ~~~~~~----~~~~~~---~~~~~l~~~~~~~~~d~ill~TD~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 273 (293)
T cd00530 210 GKDKIF----GYPSDE---TRADAVKALIDEGYGDRLLLSHDVFRKSYLEKRYGGHGYDYILTRFIPR---------LRE 273 (293)
T ss_pred Cccccc----CCCCHH---HHHHHHHHHHHCCCcCCEEEeCCcCchhhhhhccCCCChHHHHHHHHHH---------HHH
Confidence 321100 000111 12335788889987 6699999875321 122112222111 113
Q ss_pred CCCCHHHHHHHHhHHHHHHc
Q 013175 381 ERISLTDALIAHTLSAARAC 400 (448)
Q Consensus 381 ~~ls~~~al~~~T~n~A~~~ 400 (448)
.+++.+++.++.+.||+++|
T Consensus 274 ~g~~~e~i~~~~~~N~~~lf 293 (293)
T cd00530 274 RGVTEEQLDTILVENPARFL 293 (293)
T ss_pred cCCCHHHHHHHHHHCHHHhC
Confidence 46899999999999999875
No 119
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase.
Probab=98.55 E-value=8.9e-06 Score=79.13 Aligned_cols=143 Identities=15% Similarity=0.057 Sum_probs=95.8
Q ss_pred CHHHHHHHHHHHHHCC--CcEEEEecchH-----HHHHHHHHHHHhHHhcCCCCCCCeEEecccCC--hhhHHHHHhCCc
Q 013175 233 ELESLLSMTMASDKSG--LQVAIHAIGDR-----ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGI 303 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g--~~v~iHa~gd~-----a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~--~~~i~~~~~~gv 303 (448)
+...+..+++.|++.| +++.+||-+.. ....+.+++ . .+ ..+|-|+..+. ++.++.+++.+|
T Consensus 177 ~~~~f~~~f~~ar~~g~~l~~t~HAGE~~~~~~~~~~~v~~al-~----lg----~~RIGHG~~~~~dp~ll~~l~~~~I 247 (345)
T cd01321 177 PLLDFLPQLLWFPKQCAEIPFFFHAGETNGDGTETDENLVDAL-L----LN----TKRIGHGFALPKHPLLMDLVKKKNI 247 (345)
T ss_pred CHHHHHHHHHHHHHhCCCCceEeecCCCcCCCCCChhHHHHHH-H----hC----CCcCccccccCcCHHHHHHHHHcCC
Confidence 4567888999999999 99999996432 112333333 1 12 46899988664 789999999999
Q ss_pred EEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCC-CC-CHHHHHHHHHcCCCCCCCCCCCCCC
Q 013175 304 VASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA-DI-NPLCAIRTAMKRIPPGWDNAWIPSE 381 (448)
Q Consensus 304 ~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~-~~-~p~~~~~~a~~r~~~~~~~~~~~~~ 381 (448)
.+++||.+..... .+.. -...|++.++++|++++++||.|.- .. +.-.+.+.+.... ...
T Consensus 248 ~lEvCPtSN~~~~-----~v~~----~~~HPl~~ll~~Gv~vtinTDDp~~f~t~~l~~Ey~~~~~~~---------g~~ 309 (345)
T cd01321 248 AIEVCPISNQVLG-----LVSD----LRNHPAAALLARGVPVVISSDDPGFWGAKGLSHDFYQAFMGL---------APA 309 (345)
T ss_pred eEEECcchhhhhc-----cccc----hhhChHHHHHHCCCeEEEeCCCcchhCCCCchHHHHHHHHHh---------ccC
Confidence 9999999743211 1221 1246899999999999999998842 33 4444444443211 112
Q ss_pred CCCHHHHHHHHhHHHHHHcccC
Q 013175 382 RISLTDALIAHTLSAARACFLE 403 (448)
Q Consensus 382 ~ls~~~al~~~T~n~A~~~g~~ 403 (448)
.+|.++. ...+.|+.+...++
T Consensus 310 ~l~~~~l-~~l~~nsi~~sF~~ 330 (345)
T cd01321 310 DAGLRGL-KQLAENSIRYSALS 330 (345)
T ss_pred CCCHHHH-HHHHHHHHHHHCCC
Confidence 3788775 44567887777665
No 120
>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=98.32 E-value=6e-07 Score=80.53 Aligned_cols=57 Identities=40% Similarity=0.493 Sum_probs=52.1
Q ss_pred CCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCChhhhccCeeeEEEECCEEecC
Q 013175 382 RISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 448 (448)
Q Consensus 382 ~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~~~~~~~~v~~t~~~G~~V~~ 448 (448)
+-|.+-||+++|..||.++|+++.+|+|..|.+||||++|.+. +|..||+.|+.||.
T Consensus 348 gCs~e~AleaAtlhPAqlLg~ek~KGTLDfG~dADFVllDd~l----------~V~aT~isG~~V~~ 404 (407)
T KOG3892|consen 348 GCSMESALEAATLHPAQLLGLEKSKGTLDFGADADFVLLDDSL----------HVQATYISGELVWQ 404 (407)
T ss_pred CCcHHHHHhhhccChHHhhccccccccccccccCceEEEccce----------EEEEEEEccEEEEe
Confidence 3589999999999999999999999999999999999999543 69999999999984
No 121
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=98.23 E-value=3.1e-06 Score=82.51 Aligned_cols=240 Identities=15% Similarity=0.094 Sum_probs=126.2
Q ss_pred CHHHHHHHHHHHHHHHHhcCcceeEeCcc----CCCC--CccccchHHHHHHHHHHHhcCCCeeEEEEccCCc-chhhHH
Q 013175 110 SVDERREALLRASNLALSRGVTTVVDFGR----YYPG--ESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE-TWSSLA 182 (448)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~GvTtv~d~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~l~irv~~~~~~~-~~~~~~ 182 (448)
+.+.++.......+.+.+.||.-+-=... ...+ .+....+....+..++..+.-.+.+|+.+...-. ......
T Consensus 72 ~~e~~~~~~~~~l~~~~~dnV~YlElr~~P~~~~~~~~~~~~~~~~~~i~~~~~~a~~~~~i~~~li~~~~R~~~~~~~~ 151 (331)
T PF00962_consen 72 TPEDLRRYAYEVLEDFAEDNVVYLELRFSPQFHAQLGGNLSFDEVVEAIIEGIDRAEKEFGIKVRLIISVLRHFPDEWAE 151 (331)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEEEEEESHHHHHTTTCSSTHHHHHHHHHHHHHHHHHHHTTEEEEEEEEETTSTHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCeEEEEEeccccccccCCCCCHHHHHHHHHhhhhhccccccccccccccccccchHHHHH
Confidence 67788888888889999999987643211 0001 1111122223333334333333566666542111 111122
Q ss_pred HHHHhcCCcCCCCeeeCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHHH
Q 013175 183 DLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRAND 262 (448)
Q Consensus 183 ~~~~~~~~~~~~~~~~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~ 262 (448)
+..+......+. .+.|+-+. |. +.. + +...+..+++.++++|+++.+||-+.....
T Consensus 152 ~~~~~~~~~~~~--~vvG~dl~--g~----------E~~------~----~~~~~~~~~~~a~~~gl~~t~HaGE~~~~~ 207 (331)
T PF00962_consen 152 EIVELASKYPDK--GVVGFDLA--GD----------EDG------G----PPLKFAPAFRKAREAGLKLTVHAGETGGPE 207 (331)
T ss_dssp HHHHHHHHTTTT--TEEEEEEE--SS----------TTS------T----TGGGHHHHHHHHHHTT-EEEEEESSSSTHH
T ss_pred HHHHHHhhcccc--eEEEEEec--CC----------ccc------C----chHHHHHHHhhhcccceeecceecccCCcc
Confidence 222211111111 23344332 21 111 1 122377888999999999999997554444
Q ss_pred HHHHHHHHhHHhcCCCCCCCeEEecccC--ChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHH
Q 013175 263 LVLDMYKSVVVTTGKRDQRFRIEHAQHL--ASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLA 340 (448)
Q Consensus 263 ~~l~a~~~~~~~~~~~~~r~~i~H~~~~--~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~ 340 (448)
...+++.. .+ ..+|.|+..+ +++.++++++.+|.+++||.+.. .+|.-.. -...|++.+++
T Consensus 208 ~~~~ai~~----l~----~~RIgHG~~~~~~p~l~~~~~~~~I~iEvcptSN~--------~~~~~~~-~~~hP~~~~~~ 270 (331)
T PF00962_consen 208 HIRDAILL----LG----ADRIGHGVRLIKDPELLELLAERQIPIEVCPTSNV--------QLGAVPS-YEEHPLRKLLD 270 (331)
T ss_dssp HHHHHHHT----ST-----SEEEE-GGGGGSHHHHHHHHHTT-EEEE-HHHHH--------HTTSSST-GGG-CHHHHHH
T ss_pred cccchhhh----cc----ceeecchhhhhhhhHHHHHHHHhCCCeeeCCCcCc--------ccceeee-cchhHHHHHHH
Confidence 44444432 12 4699999866 46778999999999999999732 1221110 12469999999
Q ss_pred cCCceeecCCCCC-CCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccC
Q 013175 341 NNALLALGSDWPV-ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 403 (448)
Q Consensus 341 ~Gv~v~~gSD~p~-~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~ 403 (448)
+|++|+++||.|. ...+...+...+... .++|.++. .-+..|+.+..+.+
T Consensus 271 ~gv~v~i~TDd~~~~~~~l~~ey~~~~~~------------~~l~~~~l-~~l~~nsi~~sf~~ 321 (331)
T PF00962_consen 271 AGVPVSINTDDPGVFGTTLSDEYYLAAEA------------FGLSLADL-KQLARNSIEASFLS 321 (331)
T ss_dssp TT-EEEE--BSHHHHT-SHHHHHHHHHHH------------HT--HHHH-HHHHHHHHHCSSS-
T ss_pred cCCceeccCCCccccCCCcHHHHHHHHHH------------cCCCHHHH-HHHHHHHHHHHcCC
Confidence 9999999999873 234454555544432 24777774 55566888777664
No 122
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=98.14 E-value=1.9e-05 Score=75.67 Aligned_cols=142 Identities=18% Similarity=0.148 Sum_probs=95.2
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccC--ChhhHHHHHhCCcEEeecc
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL--ASGTAARFGDQGIVASMQP 309 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~--~~~~i~~~~~~gv~~~~~P 309 (448)
.+++....+++.++.+|+.+.+||-+....+.+.+++.... .-+|.|+..+ +++.+.++++.+|.+++||
T Consensus 182 ~p~~~f~~~f~~~r~~gl~lt~HaGE~~~~~~i~~al~~~~--------~~rI~HGi~~~~d~~L~~~l~~~qI~levCP 253 (345)
T COG1816 182 YPPELFVSLFKLARDNGLKLTIHAGEAGGPESIRDALDLLG--------AERIGHGIRAIEDPELLYRLAERQIPLEVCP 253 (345)
T ss_pred CCHHHHHHHHHHHHHcCceEEEeccccCCcHHHHHHHHHhc--------hhhhccccccccCHHHHHHHHHhCCeeEECC
Confidence 45678899999999999999999975444444445544332 1268888744 5678899999999999999
Q ss_pred ccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCCCC-CHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHH
Q 013175 310 QHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADI-NPLCAIRTAMKRIPPGWDNAWIPSERISLTDA 388 (448)
Q Consensus 310 ~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~-~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~a 388 (448)
.+..... .+.. -...|+++++++|++|+++||.|.-.. ....+...++. ..+++..|+
T Consensus 254 ~SNi~~~-----~v~~----~~~hPf~~~~d~Gv~VsLnTDdp~~f~~~l~~Ey~~aa~------------~~~l~~~dl 312 (345)
T COG1816 254 LSNIQLG-----VVPS----LAKHPFKKLFDAGVKVSLNTDDPLYFGTPLIEEYLVAAQ------------IYGLSREDL 312 (345)
T ss_pred cchhhcc-----cccc----hhhCcHHHHHHcCCceEEcCCChhhcCCchHHHHHHHHH------------HhCCCHHHH
Confidence 9843211 1111 124589999999999999999984322 33344444432 223677665
Q ss_pred HHHHhHHHHHHcccC
Q 013175 389 LIAHTLSAARACFLE 403 (448)
Q Consensus 389 l~~~T~n~A~~~g~~ 403 (448)
.-.+.|+=...+++
T Consensus 313 -~~~arnav~~af~~ 326 (345)
T COG1816 313 -CELARNAVEAAFIS 326 (345)
T ss_pred -HHHHHHHHHHccCC
Confidence 44466666666654
No 123
>TIGR01431 adm_rel adenosine deaminase-related growth factor. Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, mollusks, and vertebrates.
Probab=98.06 E-value=0.00057 Score=69.28 Aligned_cols=143 Identities=18% Similarity=0.165 Sum_probs=89.5
Q ss_pred HHHHHHHHH-HHHHCCCcEEEEecchH-----HHHHHHHHHHHhHHhcCCCCCCCeEEecccCC--hhhHHHHHhCCcEE
Q 013175 234 LESLLSMTM-ASDKSGLQVAIHAIGDR-----ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVA 305 (448)
Q Consensus 234 ~~~l~~~~~-~a~~~g~~v~iHa~gd~-----a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~--~~~i~~~~~~gv~~ 305 (448)
...+...+. .+++.|+++.+||-+.. ....+.+++ .. | ..+|-|+..+. ++.++.+++.+|.+
T Consensus 305 l~~f~~~~~~~~~~~gl~~t~HAGE~~~~g~~~d~nl~dAI-lL----g----~~RIGHG~~l~~~P~l~~~vke~~I~l 375 (479)
T TIGR01431 305 LLDFIDALLGPSDKEKLPYFFHAGETNWQGTTVDENLIDAL-LL----N----TTRIGHGFALVKHPLVLQMLKERNIAV 375 (479)
T ss_pred HHHHHHHHHHHHHhCCCCEEEecCCcCCCCCCchhHHHHHH-Hc----C----CccccCcccccCCHHHHHHHHHhCCeE
Confidence 444555554 44459999999995421 123344554 21 2 45899998664 78999999999999
Q ss_pred eeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCC-CC-CHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 013175 306 SMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA-DI-NPLCAIRTAMKRIPPGWDNAWIPSERI 383 (448)
Q Consensus 306 ~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~-~~-~p~~~~~~a~~r~~~~~~~~~~~~~~l 383 (448)
++||.+..... .... -..-|++.++++|++++++||.|.. .. ..-...+.+..... ...+
T Consensus 376 EvCP~SN~~l~-----~v~~----~~~HPl~~lla~Gvpv~InSDDP~~~~~t~Ls~ef~~a~~~~~---------~~~~ 437 (479)
T TIGR01431 376 EVNPISNQVLQ-----LVAD----LRNHPCAYLFADNYPMVISSDDPAFWGATPLSHDFYIAFMGLA---------SAKA 437 (479)
T ss_pred EECccchhhhc-----ccCC----cccChHHHHHHCCCcEEEeCCCccccCCCCchHHHHHHHHHhc---------ccCC
Confidence 99999743211 1111 1246899999999999999998842 22 23334444432211 1124
Q ss_pred CHHHHHHHHhHHHHHHcccCC
Q 013175 384 SLTDALIAHTLSAARACFLEN 404 (448)
Q Consensus 384 s~~~al~~~T~n~A~~~g~~~ 404 (448)
++ +-|+....|+.+...+++
T Consensus 438 ~l-~~L~~la~NSi~~Sfl~~ 457 (479)
T TIGR01431 438 DL-RTLKQLALNSIKYSALSE 457 (479)
T ss_pred CH-HHHHHHHHHHHHHHCCCH
Confidence 55 456666778877776653
No 124
>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=97.93 E-value=0.00033 Score=65.14 Aligned_cols=134 Identities=19% Similarity=0.165 Sum_probs=86.5
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccc
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHL 312 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~ 312 (448)
..+.++.+++.|.+.|++|.+|+... ....++.+++ .+ .....|.|+...+.+.+.++.+.|+.+++.+...
T Consensus 106 q~~~~~~~~~~a~e~~~pv~iH~~~~--~~~~~~l~~~----~~--~~~~~i~H~~~~~~~~~~~~~~~g~~~~~~~~~~ 177 (251)
T cd01310 106 QKEVFRAQLELAKELNLPVVIHSRDA--HEDVLEILKE----YG--PPKRGVFHCFSGSAEEAKELLDLGFYISISGIVT 177 (251)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeeCc--hHHHHHHHHh----cC--CCCCEEEEccCCCHHHHHHHHHcCCEEEeeeeec
Confidence 35678999999999999999998643 2333443332 33 2356777877666678888888999999887652
Q ss_pred cCchhHHHHhcCHhhhhhhhhhHHHHHHcC--CceeecCCCCCCCCC--------HH--HHHHHHHcCCCCCCCCCCCCC
Q 013175 313 LDDADSARKKLGVDRAERESYLFQSLLANN--ALLALGSDWPVADIN--------PL--CAIRTAMKRIPPGWDNAWIPS 380 (448)
Q Consensus 313 ~~~~~~~~~~~g~~r~~~~~~~~~~~~~~G--v~v~~gSD~p~~~~~--------p~--~~~~~a~~r~~~~~~~~~~~~ 380 (448)
.... .-++.+++.+ -.+.++||+|..+.. |. ..+...+. ..
T Consensus 178 ~~~~----------------~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~~~la-----------~~ 230 (251)
T cd01310 178 FKNA----------------NELREVVKEIPLERLLLETDSPYLAPVPFRGKRNEPAYVKHVAEKIA-----------EL 230 (251)
T ss_pred cCCC----------------HHHHHHHHhCChHHEEEcccCCCCCCCCCCCCCCCChhHHHHHHHHH-----------HH
Confidence 2111 0123333333 268999999864321 11 11222111 11
Q ss_pred CCCCHHHHHHHHhHHHHHHcc
Q 013175 381 ERISLTDALIAHTLSAARACF 401 (448)
Q Consensus 381 ~~ls~~~al~~~T~n~A~~~g 401 (448)
.+++.+++.+..+.|+++++|
T Consensus 231 ~gl~~e~~~~~~~~N~~~ll~ 251 (251)
T cd01310 231 KGISVEEVAEVTTENAKRLFG 251 (251)
T ss_pred HCcCHHHHHHHHHHHHHHHhC
Confidence 358999999999999999875
No 125
>PRK09875 putative hydrolase; Provisional
Probab=97.78 E-value=0.003 Score=59.86 Aligned_cols=144 Identities=10% Similarity=0.098 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHCCCcEEEEecch-HHHHHHHHHHHHhHHhcCCCCCCCeEEecccC-ChhhHHHHHhCCcEEeecccc
Q 013175 234 LESLLSMTMASDKSGLQVAIHAIGD-RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL-ASGTAARFGDQGIVASMQPQH 311 (448)
Q Consensus 234 ~~~l~~~~~~a~~~g~~v~iHa~gd-~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~-~~~~i~~~~~~gv~~~~~P~~ 311 (448)
.+.|+.+.+.+.+.|.||.+|.... .+.+ .++.+ ...|....|+.|.|+... +.+.+.++++.|+++++.-.-
T Consensus 138 ~kvl~Aaa~a~~~TG~pi~~Ht~~~~~g~e-~l~il----~e~Gvd~~rvvi~H~d~~~d~~~~~~l~~~G~~l~fD~~g 212 (292)
T PRK09875 138 EKVFIAAALAHNQTGRPISTHTSFSTMGLE-QLALL----QAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIG 212 (292)
T ss_pred HHHHHHHHHHHHHHCCcEEEcCCCccchHH-HHHHH----HHcCcCcceEEEeCCCCCCCHHHHHHHHHcCCEEEeccCC
Confidence 4567778888889999999997543 2222 23333 334665668999999643 567889999999999986221
Q ss_pred ccCchhHHHHhcCHhhhhhhhhhHHHHHHcC--CceeecCCCCCC-CCC------HHHHHHHHHcCCCCCCCCCCCCCCC
Q 013175 312 LLDDADSARKKLGVDRAERESYLFQSLLANN--ALLALGSDWPVA-DIN------PLCAIRTAMKRIPPGWDNAWIPSER 382 (448)
Q Consensus 312 ~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~G--v~v~~gSD~p~~-~~~------p~~~~~~a~~r~~~~~~~~~~~~~~ 382 (448)
... ..+.. +....++.+.+.| =.+.+++|..-. ... .-..+...+.+. .+.+
T Consensus 213 ~~~-------~~pd~---~r~~~i~~L~~~Gy~drilLS~D~~~~~~~~~~gg~G~~~i~~~~ip~L---------~~~G 273 (292)
T PRK09875 213 KNS-------YYPDE---KRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQL---------RQSG 273 (292)
T ss_pred Ccc-------cCCHH---HHHHHHHHHHhcCCCCeEEEeCCCCCcccccccCCCChhHHHHHHHHHH---------HHcC
Confidence 100 01111 2234678899998 368889996422 111 112233333322 2346
Q ss_pred CCHHHHHHHHhHHHHHHcc
Q 013175 383 ISLTDALIAHTLSAARACF 401 (448)
Q Consensus 383 ls~~~al~~~T~n~A~~~g 401 (448)
+|-++.=++...||+++|+
T Consensus 274 vse~~I~~m~~~NP~r~~~ 292 (292)
T PRK09875 274 FSQADVDVMLRENPSQFFQ 292 (292)
T ss_pred CCHHHHHHHHHHCHHHHhC
Confidence 8988888888899999874
No 126
>TIGR00010 hydrolase, TatD family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.
Probab=97.77 E-value=0.00052 Score=63.92 Aligned_cols=136 Identities=18% Similarity=0.162 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeecccccc
Q 013175 234 LESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLL 313 (448)
Q Consensus 234 ~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~ 313 (448)
.+.+++.++.|.+.|++|.+|+.+.. ...++.+++. + .....|.|+...+.+.+.++.+.|+.+++.....+
T Consensus 107 ~~~~~~~~~~a~~~~~pv~iH~~~~~--~~~~~~l~~~----~--~~~~~i~H~~~~~~~~~~~~~~~g~~~~~~~~~~~ 178 (252)
T TIGR00010 107 EEVFRAQLQLAEELNLPVIIHARDAE--EDVLDILREE----K--PKVGGVLHCFTGDAELAKKLLDLGFYISISGIVTF 178 (252)
T ss_pred HHHHHHHHHHHHHhCCCeEEEecCcc--HHHHHHHHhc----C--CCCCEEEEccCCCHHHHHHHHHCCCeEeeceeEec
Confidence 47788889999999999999997522 3345554432 2 12467889886677888888889999998864322
Q ss_pred CchhHHHHhcCHhhhhhhhhhHHHHHHcC--CceeecCCCCCCCC--------CHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 013175 314 DDADSARKKLGVDRAERESYLFQSLLANN--ALLALGSDWPVADI--------NPLCAIRTAMKRIPPGWDNAWIPSERI 383 (448)
Q Consensus 314 ~~~~~~~~~~g~~r~~~~~~~~~~~~~~G--v~v~~gSD~p~~~~--------~p~~~~~~a~~r~~~~~~~~~~~~~~l 383 (448)
... .-++++++.. -.+.++||+|..+. .|. .+...+... ....++
T Consensus 179 ~~~----------------~~~~~~i~~~~~dril~~TD~p~~~~~~~~~~~~~p~-~i~~~~~~~--------a~~~g~ 233 (252)
T TIGR00010 179 KNA----------------KSLREVVRKIPLERLLVETDSPYLAPVPYRGKRNEPA-FVRYTVEAI--------AEIKGM 233 (252)
T ss_pred CCc----------------HHHHHHHHhCCHHHeEecccCCCCCCCCCCCCCCCCh-hHHHHHHHH--------HHHhCc
Confidence 111 1133344433 36889999875211 121 111110000 001258
Q ss_pred CHHHHHHHHhHHHHHHccc
Q 013175 384 SLTDALIAHTLSAARACFL 402 (448)
Q Consensus 384 s~~~al~~~T~n~A~~~g~ 402 (448)
+.+++.++.+.|+++++++
T Consensus 234 ~~~~~~~~~~~N~~~~~~~ 252 (252)
T TIGR00010 234 DVEELAQITTKNAKRLFGL 252 (252)
T ss_pred CHHHHHHHHHHHHHHHhCc
Confidence 9999999999999999874
No 127
>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]
Probab=97.63 E-value=9.8e-05 Score=70.33 Aligned_cols=66 Identities=20% Similarity=0.142 Sum_probs=53.3
Q ss_pred CCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCC-Chhh----hc--cCeeeEEEECCEEec
Q 013175 382 RISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAA----EV--SASIEATYVSGVQAY 447 (448)
Q Consensus 382 ~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~-~~~~----~~--~~~v~~t~~~G~~V~ 447 (448)
-+++.+...+--.+||+.+|+.+++|.|-+|.+||+.|.|-+|.+ ++.. +. -.+...|+++|++|.
T Consensus 437 E~t~~eia~~TRa~~ak~lgl~e~kGhLg~GadadIaiYdlnP~~vDps~dye~v~kaf~~A~ytlK~GeIvv 509 (575)
T COG1229 437 ELTLYELAIMTRANPAKVLGLSERKGHLGVGADADIAIYDLNPEQVDPSNDYEKVEKAFRKAAYTLKGGEIVV 509 (575)
T ss_pred cccHHHHHHHHhcChhhhcccccccCccCcCccCceEEEecChhhcCCcccHHHHHHHHhheeEEecCceEEE
Confidence 478999988888999999999999999999999999999999876 5322 11 124667888888763
No 128
>KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism]
Probab=97.48 E-value=0.0012 Score=63.81 Aligned_cols=138 Identities=22% Similarity=0.246 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHCCCcEEEEecchH----HHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhh--HHHHHhCCcEEeec
Q 013175 235 ESLLSMTMASDKSGLQVAIHAIGDR----ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGT--AARFGDQGIVASMQ 308 (448)
Q Consensus 235 ~~l~~~~~~a~~~g~~v~iHa~gd~----a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~--i~~~~~~gv~~~~~ 308 (448)
..+..+...+.+.|+.+.+||-+.. -++.+|+. .+ ..+|-|+..+..+. +.++++.++.+++|
T Consensus 227 ~~f~~vl~~~~~~gi~~t~HaGE~~~~~~~v~~~LD~-------l~----~~RIGHG~~l~~dp~L~~~~k~~nI~lEiC 295 (399)
T KOG1097|consen 227 SLFLEVLAKAPAKGIHLTFHAGETNGGASVVKNALDL-------LG----TERIGHGYFLTKDPELINLLKSRNIALEIC 295 (399)
T ss_pred hhhHHHHHhhhhcCCcEEEEccccCCChHHHHHHHHh-------hC----CccccCceeccCCHHHHHHHHhcCceEEEc
Confidence 3455666666679999999995432 23333441 12 46899999876544 89999999999999
Q ss_pred cccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCC-CCCHH-HHHHHHHcCCCCCCCCCCCCCCCCCHH
Q 013175 309 PQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA-DINPL-CAIRTAMKRIPPGWDNAWIPSERISLT 386 (448)
Q Consensus 309 P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~-~~~p~-~~~~~a~~r~~~~~~~~~~~~~~ls~~ 386 (448)
|.+..... ++.. -.+.|++.++++|+++++.||.|.. ..-|+ ...+.|+.... + .++.+
T Consensus 296 P~SN~vl~------~v~d---~rnhp~~~~~~~~vP~vI~sDDP~~f~~~~Lt~dfy~A~~~~~--------~--~~~~~ 356 (399)
T KOG1097|consen 296 PISNQVLG------LVSD---LRNHPVARLLAAGVPVVINSDDPGFFGAAPLTLDFYLAFLGIA--------P--NLDLR 356 (399)
T ss_pred cchhhhee------cccc---ccccHHHHHHhCCCCEEEeCCCcccccCccccHHHHHHHHhcc--------c--cCCHH
Confidence 99743211 1111 2367999999999999999998732 22222 23444443321 1 46776
Q ss_pred HHHHHHhHHHHHHcccC
Q 013175 387 DALIAHTLSAARACFLE 403 (448)
Q Consensus 387 ~al~~~T~n~A~~~g~~ 403 (448)
+..+ ++.|+.+...+.
T Consensus 357 ~l~~-la~nai~~S~l~ 372 (399)
T KOG1097|consen 357 ELKR-LALNAIKYSFLS 372 (399)
T ss_pred HHHH-HHHHHhhhccCC
Confidence 6544 456777766654
No 129
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]
Probab=97.36 E-value=0.025 Score=52.47 Aligned_cols=132 Identities=17% Similarity=0.294 Sum_probs=82.0
Q ss_pred eCceEEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHH-H------HHHHH-HHH
Q 013175 198 LGGVKAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRA-N------DLVLD-MYK 269 (448)
Q Consensus 198 ~~g~K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a-~------~~~l~-a~~ 269 (448)
+.++|++--|... ....|. -+-+.+..+++...+.|+++.+|.+-..+ + ...++ .++
T Consensus 96 i~a~KlYPaGaTT-------------NS~~GV--~~~~~~~pvle~Mq~~gmpLlvHGEvt~~~vDifdrE~~Fi~~vl~ 160 (344)
T COG0418 96 IRAVKLYPAGATT-------------NSDSGV--TDIEKIYPVLEAMQKIGMPLLVHGEVTDAEVDIFDREAAFIESVLE 160 (344)
T ss_pred EEEEEeccCCccc-------------cCcCCc--CcHHHHHHHHHHHHHcCCeEEEecccCCccccchhhHHHHHHHHHH
Confidence 5678999777531 112343 34677888999999999999999863211 1 12233 444
Q ss_pred HhHHhcCCCCCCCeEEecccCChhhHHHHHhC--CcEEeeccccccCchhHHHHhcCH-----------hhhhhhhhhHH
Q 013175 270 SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQ--GIVASMQPQHLLDDADSARKKLGV-----------DRAERESYLFQ 336 (448)
Q Consensus 270 ~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~--gv~~~~~P~~~~~~~~~~~~~~g~-----------~r~~~~~~~~~ 336 (448)
...+..+ ..+..++|++..+ .++.+++. ++..+++|+|+..+.+... .|. +|. .....++
T Consensus 161 pl~~~fP--~LKIV~EHiTT~d--av~~v~~~~~nlaATIT~hHL~~nrnd~l--~Ggi~Ph~fClPilKr~-~hr~AL~ 233 (344)
T COG0418 161 PLRQRFP--KLKIVLEHITTKD--AVEYVKDANNNLAATITPHHLLLNRNDML--VGGIRPHLFCLPILKRE-THREALR 233 (344)
T ss_pred HHHhhCC--cceEEEEEeccHH--HHHHHHhcCcceeeEeehhheeeehhhhh--cCCCCcceeeeccccch-hhHHHHH
Confidence 4545444 5688999988544 45555554 4899999999987765331 122 111 2333455
Q ss_pred HHHHcCC-ceeecCCC
Q 013175 337 SLLANNA-LLALGSDW 351 (448)
Q Consensus 337 ~~~~~Gv-~v~~gSD~ 351 (448)
++.-.|- .+.+|||+
T Consensus 234 ~aa~sg~~kfFlGtDS 249 (344)
T COG0418 234 EAATSGHPKFFLGTDS 249 (344)
T ss_pred HHHhcCCCcEEecCCC
Confidence 5555554 68999996
No 130
>PRK10812 putative DNAse; Provisional
Probab=97.31 E-value=0.0081 Score=56.36 Aligned_cols=137 Identities=16% Similarity=0.092 Sum_probs=90.4
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccc
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHL 312 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~ 312 (448)
..+.+++.++.|.+.|+||.+|+-+ +...+++.+++. +... .-.+.||..-+.+.++++.++|..+++.....
T Consensus 109 Q~~vf~~ql~lA~e~~~Pv~iH~r~--a~~~~l~iL~~~----~~~~-~~~v~H~fsG~~~~a~~~~~~G~~is~~g~~t 181 (265)
T PRK10812 109 QQESFRHHIQIGRELNKPVIVHTRD--ARADTLAILREE----KVTD-CGGVLHCFTEDRETAGKLLDLGFYISFSGIVT 181 (265)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeeC--chHHHHHHHHhh----cCCC-CCEEEEeecCCHHHHHHHHHCCCEEEECeeee
Confidence 3567889999999999999999865 334555555432 2111 12478999878899999999999999865321
Q ss_pred cCchhHHHHhcCHhhhhhhhhhHHHHHHcC--CceeecCCCCCCCC--------CHHHHHH--HHHcCCCCCCCCCCCCC
Q 013175 313 LDDADSARKKLGVDRAERESYLFQSLLANN--ALLALGSDWPVADI--------NPLCAIR--TAMKRIPPGWDNAWIPS 380 (448)
Q Consensus 313 ~~~~~~~~~~~g~~r~~~~~~~~~~~~~~G--v~v~~gSD~p~~~~--------~p~~~~~--~a~~r~~~~~~~~~~~~ 380 (448)
+. ....++++++.+ -.+.+.||+|...+ .|..-.. ..+.. -
T Consensus 182 ~~----------------~~~~~~~~~~~ipldrlLlETD~P~~~p~~~~g~~n~P~~i~~v~~~ia~-----------l 234 (265)
T PRK10812 182 FR----------------NAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAV-----------L 234 (265)
T ss_pred cC----------------ccHHHHHHHHhCChhhEEEecCCCCCCCcCCCCCCCCcHHHHHHHHHHHH-----------H
Confidence 11 112344555554 36788999985421 2322211 11111 1
Q ss_pred CCCCHHHHHHHHhHHHHHHcccC
Q 013175 381 ERISLTDALIAHTLSAARACFLE 403 (448)
Q Consensus 381 ~~ls~~~al~~~T~n~A~~~g~~ 403 (448)
.+++.+++.+..+.|+.++|+++
T Consensus 235 ~g~~~eei~~~~~~N~~~lf~~~ 257 (265)
T PRK10812 235 KGVSVEELAQVTTDNFARLFHID 257 (265)
T ss_pred hCCCHHHHHHHHHHHHHHHHCCC
Confidence 24899999999999999999985
No 131
>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.27 E-value=0.00089 Score=64.47 Aligned_cols=67 Identities=28% Similarity=0.271 Sum_probs=52.6
Q ss_pred CCCCHHHHHHHHhHHHHHHcccCCCcccccCCCcccEEEecCCCCCCh-----hh---------hccCeeeEEEECCEEe
Q 013175 381 ERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDF-----AA---------EVSASIEATYVSGVQA 446 (448)
Q Consensus 381 ~~ls~~~al~~~T~n~A~~~g~~~~~Gsi~~Gk~ADlvvld~d~~~~~-----~~---------~~~~~v~~t~~~G~~V 446 (448)
..|+++.+++-+|..+|..+|+.+ +|.|++|.+|||+|+|+....+. .. +.+..++.|+++|.+.
T Consensus 472 p~l~Le~av~rmT~~~Ae~~GL~d-rGlvreG~rADl~viDp~~vr~~a~y~~~~lPa~G~~~~~vn~~~vat~v~Gvvs 550 (579)
T COG3653 472 PLLSLERAVRRMTGELAEWFGLGD-RGLVREGDRADLVVIDPHLVRDVATYTEPALPAYGILRVMVNRNVVATGVGGVVS 550 (579)
T ss_pred CcccHHHHHHHHhccHHHHhCccc-ccccccccccceEEEccccccccccccCccCCCCcceEEEEeccceeeecceeEE
Confidence 469999999999999999999987 79999999999999998643210 11 1133577788889887
Q ss_pred cC
Q 013175 447 YP 448 (448)
Q Consensus 447 ~~ 448 (448)
|+
T Consensus 551 ~r 552 (579)
T COG3653 551 FR 552 (579)
T ss_pred Ee
Confidence 63
No 132
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=97.12 E-value=0.011 Score=55.29 Aligned_cols=135 Identities=17% Similarity=0.075 Sum_probs=87.3
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccc
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHL 312 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~ 312 (448)
..+.+++.++.|.++++||.+|+.+ +.+.+++.+.+. +. .+..+.||..-+.++++++-++|..+++.+...
T Consensus 112 Q~~vf~~ql~lA~~~~~Pv~iH~r~--a~~~~~~il~~~----~~--~~~~i~H~fsG~~~~a~~~l~~G~~iS~~g~it 183 (258)
T PRK11449 112 QQWLLDEQLKLAKRYDLPVILHSRR--THDKLAMHLKRH----DL--PRTGVVHGFSGSLQQAERFVQLGYKIGVGGTIT 183 (258)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEecC--ccHHHHHHHHhc----CC--CCCeEEEcCCCCHHHHHHHHHCCCEEEeCcccc
Confidence 3467889999999999999999975 334555555432 21 124589999888999999999999999877643
Q ss_pred cCchhHHHHhcCHhhhhhhhhhHHHHHHc-C-CceeecCCCCCCCCC--------HHHHHHH--HHcCCCCCCCCCCCCC
Q 013175 313 LDDADSARKKLGVDRAERESYLFQSLLAN-N-ALLALGSDWPVADIN--------PLCAIRT--AMKRIPPGWDNAWIPS 380 (448)
Q Consensus 313 ~~~~~~~~~~~g~~r~~~~~~~~~~~~~~-G-v~v~~gSD~p~~~~~--------p~~~~~~--a~~r~~~~~~~~~~~~ 380 (448)
+.... .++++++. . -.+.+.||+|..++. |...... .+.. -
T Consensus 184 ~~~~~----------------~~~~~~~~ipldriL~ETD~P~l~p~~~~~~~n~p~~~~~~~~~ia~-----------l 236 (258)
T PRK11449 184 YPRAS----------------KTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFDVLCE-----------L 236 (258)
T ss_pred ccCcH----------------HHHHHHHhCChhhEEEecCCCCCCCCCCCCCCCCChHHHHHHHHHHH-----------H
Confidence 32111 11222211 0 146889999864332 2211111 1111 1
Q ss_pred CCCCHHHHHHHHhHHHHHHccc
Q 013175 381 ERISLTDALIAHTLSAARACFL 402 (448)
Q Consensus 381 ~~ls~~~al~~~T~n~A~~~g~ 402 (448)
..++.+++.+..+.|..+++++
T Consensus 237 ~~~~~~el~~~~~~N~~~lf~~ 258 (258)
T PRK11449 237 RPEPADEIAEVLLNNTYTLFNV 258 (258)
T ss_pred HCcCHHHHHHHHHHHHHHHhCc
Confidence 2478889999999999998874
No 133
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3.1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....
Probab=96.97 E-value=0.02 Score=54.75 Aligned_cols=152 Identities=16% Similarity=0.159 Sum_probs=84.0
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecchH-HHHHHHHHHHHhHHhcCCCCCCCeEEecccCC-hhhHHHHHhCCcEEeec-c
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIGDR-ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA-SGTAARFGDQGIVASMQ-P 309 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~gd~-a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~-~~~i~~~~~~gv~~~~~-P 309 (448)
....++++.+...+.|.+|++|+.... .-...++.+++ .|..-.++.|.|+.... .+.+.++++.|+++++- .
T Consensus 140 E~k~lrAaa~A~~~TG~pI~~H~~~g~~~~~e~~~il~e----~Gv~~~rvvigH~D~~~D~~y~~~la~~G~~l~~D~~ 215 (308)
T PF02126_consen 140 EEKVLRAAARAHKETGAPISTHTGRGTRMGLEQLDILEE----EGVDPSRVVIGHMDRNPDLDYHRELADRGVYLEFDTI 215 (308)
T ss_dssp HHHHHHHHHHHHHHHT-EEEEEESTTGTCHHHHHHHHHH----TT--GGGEEETSGGGST-HHHHHHHHHTT-EEEETTT
T ss_pred HHHHHHHHHHHHHHhCCeEEEcCCCCCcCHHHHHHHHHH----cCCChhHeEEeCCCCCCCHHHHHHHHhcCCEEEecCC
Confidence 345677788888899999999997543 22233444433 35555689999998443 36778889999999872 2
Q ss_pred ccccCchhHHHHh--cCHhhhhhhhhhHHHHHHcCC--ceeecCCCCC----CCCCH--H---HHHHHHHcCCCCCCCCC
Q 013175 310 QHLLDDADSARKK--LGVDRAERESYLFQSLLANNA--LLALGSDWPV----ADINP--L---CAIRTAMKRIPPGWDNA 376 (448)
Q Consensus 310 ~~~~~~~~~~~~~--~g~~r~~~~~~~~~~~~~~Gv--~v~~gSD~p~----~~~~p--~---~~~~~a~~r~~~~~~~~ 376 (448)
.+-...... ... ..+.. .....+..|+++|. .+.+|.|... ..... . .-+...+.+.
T Consensus 216 g~~~~g~~~-~~~~~~~~d~--~ri~~l~~L~~~Gy~~qIlLS~D~~~k~~~~~~gg~g~~~~~i~~~fiP~L------- 285 (308)
T PF02126_consen 216 GREFSGKDK-NPRVGYPPDE--ERIELLKELIEEGYADQILLSHDIGRKSRLYRYGGGGYGYIYILTRFIPRL------- 285 (308)
T ss_dssp T-B-TTTTT-CHSCTTS-HH--HHHHHHHHHHHTTTGGGEEE-HHHESEEGSSSCCHHHHTTTHHHHTHHHHH-------
T ss_pred cccccCccc-CccCCCCCHH--HHHHHHHHHHHcCCcCcEEEeccccccccccccCCCCccHHHHHHHHHHHH-------
Confidence 110000000 000 11111 23456888999987 5889999432 11110 0 1111112211
Q ss_pred CCCCCCCCHHHHHHHHhHHHHHHc
Q 013175 377 WIPSERISLTDALIAHTLSAARAC 400 (448)
Q Consensus 377 ~~~~~~ls~~~al~~~T~n~A~~~ 400 (448)
.+.++|-++.=++...||+++|
T Consensus 286 --~~~Gv~~~~i~~ilv~NP~r~l 307 (308)
T PF02126_consen 286 --KERGVSEEDIDKILVENPARIL 307 (308)
T ss_dssp --HHTTS-HHHHHHHHTHHHHHHH
T ss_pred --HHcCCCHHHHHHHHHHCHHHHc
Confidence 2346898888888889999986
No 134
>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition.; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A ....
Probab=96.83 E-value=0.02 Score=53.47 Aligned_cols=135 Identities=20% Similarity=0.152 Sum_probs=85.7
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccccc
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHL 312 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~ 312 (448)
..+.+++.++.|.++++|+.+|+-+ +.+.+++.+++... .+ .-.+.|+..-+.+.++++.+.|+.+++.+...
T Consensus 109 Q~~vF~~ql~lA~~~~~pv~iH~r~--a~~~~l~il~~~~~----~~-~~~i~H~f~g~~~~~~~~~~~g~~~S~~~~~~ 181 (255)
T PF01026_consen 109 QEEVFERQLELAKELNLPVSIHCRK--AHEELLEILKEYGP----PN-LRVIFHCFSGSPEEAKKFLDLGCYFSFSGAIT 181 (255)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEEES--HHHHHHHHHHHTTG----GT-SEEEETT--S-HHHHHHHHHTTEEEEEEGGGG
T ss_pred HHHHHHHHHHHHHHhCCcEEEecCC--cHHHHHHHHHhccc----cc-eeEEEecCCCCHHHHHHHHhcCceEEeccccc
Confidence 3567889999999999999999987 55566776655431 11 15789998889999999999999999988754
Q ss_pred cCchhHHHHhcCHhhhhhhhhhHHHHHHc--CCceeecCCCCCCCC--------CHH--HHHHHHHcCCCCCCCCCCCCC
Q 013175 313 LDDADSARKKLGVDRAERESYLFQSLLAN--NALLALGSDWPVADI--------NPL--CAIRTAMKRIPPGWDNAWIPS 380 (448)
Q Consensus 313 ~~~~~~~~~~~g~~r~~~~~~~~~~~~~~--Gv~v~~gSD~p~~~~--------~p~--~~~~~a~~r~~~~~~~~~~~~ 380 (448)
+.... ..+++++. .-.+.+-||+|.... .|. ..+...+.+.
T Consensus 182 ~~~~~----------------~~~~~~~~ip~drillETD~P~~~~~~~~~~~~~p~~i~~~~~~la~~----------- 234 (255)
T PF01026_consen 182 FKNSK----------------KVRELIKAIPLDRILLETDAPYLAPDPYRGKPNEPSNIPKVAQALAEI----------- 234 (255)
T ss_dssp STTSH----------------HHHHHHHHS-GGGEEEE-BTTSSECTTSTTSE--GGGHHHHHHHHHHH-----------
T ss_pred ccccH----------------HHHHHHhcCChhhEEEcCCCCcCCccccCCCCCChHHHHHHHHHHHHH-----------
Confidence 32111 11122211 124788999985321 222 1111112111
Q ss_pred CCCCHHHHHHHHhHHHHHHcc
Q 013175 381 ERISLTDALIAHTLSAARACF 401 (448)
Q Consensus 381 ~~ls~~~al~~~T~n~A~~~g 401 (448)
..++++++.+....|..++||
T Consensus 235 ~~~~~e~~~~~~~~N~~r~f~ 255 (255)
T PF01026_consen 235 KGISLEELAQIIYENAKRLFG 255 (255)
T ss_dssp HTSTHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHhC
Confidence 248999999999999998875
No 135
>PRK10425 DNase TatD; Provisional
Probab=96.70 E-value=0.53 Score=43.95 Aligned_cols=136 Identities=10% Similarity=0.012 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeecccccc
Q 013175 234 LESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLL 313 (448)
Q Consensus 234 ~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~ 313 (448)
.+.+++.++.|.++++|+.+|+-+ +.+.+++.+++.. . ...-.+.||..-+.+.++++.++|..+++.+...+
T Consensus 107 ~~vF~~ql~lA~~~~~Pv~iH~r~--a~~~~l~iL~~~~---~--~~~~~i~H~fsG~~~~~~~~l~~G~~~si~g~i~~ 179 (258)
T PRK10425 107 ERAFVAQLAIAAELNMPVFMHCRD--AHERFMALLEPWL---D--KLPGAVLHCFTGTREEMQACLARGLYIGITGWVCD 179 (258)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeC--chHHHHHHHHHhc---c--CCCCeEEEecCCCHHHHHHHHHCCCEEEECceeec
Confidence 467889999999999999999974 3456666655421 1 11236789999899999999999999998775432
Q ss_pred CchhHHHHhcCHhhhhhhhhhHHHHHHc-C-CceeecCCCCCCCC------------CHHHHHHH--HHcCCCCCCCCCC
Q 013175 314 DDADSARKKLGVDRAERESYLFQSLLAN-N-ALLALGSDWPVADI------------NPLCAIRT--AMKRIPPGWDNAW 377 (448)
Q Consensus 314 ~~~~~~~~~~g~~r~~~~~~~~~~~~~~-G-v~v~~gSD~p~~~~------------~p~~~~~~--a~~r~~~~~~~~~ 377 (448)
.... ..++++++. . -.+.+-||+|...+ .|..-... .+.
T Consensus 180 ~~~~---------------~~~~~~~~~ipldrlLlETDaP~l~P~~~~~~~~~~~n~P~~i~~v~~~iA---------- 234 (258)
T PRK10425 180 ERRG---------------LELRELLPLIPAERLLLETDAPYLLPRDLTPKPASRRNEPAFLPHILQRIA---------- 234 (258)
T ss_pred cccc---------------HHHHHHHHhCChHHEEEeccCCCCCCCCcCCCCCCCCCCcHHHHHHHHHHH----------
Confidence 2110 011111111 0 14677899985322 23211111 111
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHccc
Q 013175 378 IPSERISLTDALIAHTLSAARACFL 402 (448)
Q Consensus 378 ~~~~~ls~~~al~~~T~n~A~~~g~ 402 (448)
.-..++.+++.+..+.|.-++|++
T Consensus 235 -~l~~~~~~~v~~~~~~N~~~lf~~ 258 (258)
T PRK10425 235 -HWRGEDAAWLAATTDANARTLFGL 258 (258)
T ss_pred -HHHCcCHHHHHHHHHHHHHHHhCc
Confidence 112479999999999999888764
No 136
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=96.54 E-value=0.26 Score=43.85 Aligned_cols=135 Identities=20% Similarity=0.201 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHCCCcEEEEecch---HHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCC--cEEeec
Q 013175 234 LESLLSMTMASDKSGLQVAIHAIGD---RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQG--IVASMQ 308 (448)
Q Consensus 234 ~~~l~~~~~~a~~~g~~v~iHa~gd---~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~g--v~~~~~ 308 (448)
.+.+++.++.|++.++|+.+|.-.. .+....++.+. ..+.......|.|+.. +.++.+-+.+ +..++|
T Consensus 113 ~evf~~QL~LA~e~dvPviVHTPr~nK~e~t~~ildi~~----~~~l~~~lvvIDH~N~---etv~~vld~e~~vGlTvq 185 (254)
T COG1099 113 KEVFREQLELARELDVPVIVHTPRRNKKEATSKILDILI----ESGLKPSLVVIDHVNE---ETVDEVLDEEFYVGLTVQ 185 (254)
T ss_pred HHHHHHHHHHHHHcCCcEEEeCCCCcchhHHHHHHHHHH----HcCCChhheehhcccH---HHHHHHHhccceEEEEec
Confidence 3568889999999999999998532 23334444433 3355556778888764 4555444444 556788
Q ss_pred cccccCchhHHHHhcCHhhhhhhhhhHHHHHHcC-CceeecCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCCCCHHH
Q 013175 309 PQHLLDDADSARKKLGVDRAERESYLFQSLLANN-ALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTD 387 (448)
Q Consensus 309 P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~G-v~v~~gSD~p~~~~~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~ 387 (448)
|.-+ ++..+ +.-..+.| -.+.+.||+.....+|+.--..++.. ...+++.++
T Consensus 186 PgKl-----------t~~eA------veIV~ey~~~r~ilnSD~~s~~sd~lavprtal~m----------~~~gv~~~~ 238 (254)
T COG1099 186 PGKL-----------TVEEA------VEIVREYGAERIILNSDAGSAASDPLAVPRTALEM----------EERGVGEEE 238 (254)
T ss_pred CCcC-----------CHHHH------HHHHHHhCcceEEEecccccccccchhhhHHHHHH----------HHhcCCHHH
Confidence 8533 22221 12233344 56888999876667777655555432 234678888
Q ss_pred HHHHHhHHHHHHccc
Q 013175 388 ALIAHTLSAARACFL 402 (448)
Q Consensus 388 al~~~T~n~A~~~g~ 402 (448)
.-+.+-.|+-.++|+
T Consensus 239 i~kV~~~NA~~~~~l 253 (254)
T COG1099 239 IEKVVRENALSFYGL 253 (254)
T ss_pred HHHHHHHHHHHHhCc
Confidence 778877888777765
No 137
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=96.48 E-value=0.043 Score=50.86 Aligned_cols=136 Identities=21% Similarity=0.158 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeecccccc
Q 013175 234 LESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLL 313 (448)
Q Consensus 234 ~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~ 313 (448)
.+.+++.++.|.+.++|+.+|+-+ |.+.+++.+++... ..-.|.||..-+.++.+++-++|..+++.+...+
T Consensus 111 ~~~F~~ql~lA~~~~lPviIH~R~--A~~d~~~iL~~~~~------~~~gi~HcFsGs~e~a~~~~d~G~yisisG~itf 182 (256)
T COG0084 111 EEVFEAQLELAKELNLPVIIHTRD--AHEDTLEILKEEGA------PVGGVLHCFSGSAEEARKLLDLGFYISISGIVTF 182 (256)
T ss_pred HHHHHHHHHHHHHcCCCEEEEccc--cHHHHHHHHHhcCC------CCCEEEEccCCCHHHHHHHHHcCeEEEECceeec
Confidence 567889999999999999999975 44455555544321 2557999999999999999999999998877654
Q ss_pred CchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCCCCCHHHH--------HHH--HHcCCCCCCCCCCCCCCCC
Q 013175 314 DDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCA--------IRT--AMKRIPPGWDNAWIPSERI 383 (448)
Q Consensus 314 ~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~~p~~~--------~~~--a~~r~~~~~~~~~~~~~~l 383 (448)
....... +-+ + ..|+.. +.+=||+|...+.|+.+ -.. .+.. -.++
T Consensus 183 k~a~~~~-----ev~-~-~iPldr-------LL~ETDsPyl~P~p~rGkrNeP~~v~~v~~~iAe-----------lk~~ 237 (256)
T COG0084 183 KNAEKLR-----EVA-R-ELPLDR-------LLLETDAPYLAPVPYRGKRNEPAYVRHVAEKLAE-----------LKGI 237 (256)
T ss_pred CCcHHHH-----HHH-H-hCCHhH-------eEeccCCCCCCCcCCCCCCCCchHHHHHHHHHHH-----------HhCC
Confidence 3321110 001 1 223333 45679998644333222 111 1111 1248
Q ss_pred CHHHHHHHHhHHHHHHccc
Q 013175 384 SLTDALIAHTLSAARACFL 402 (448)
Q Consensus 384 s~~~al~~~T~n~A~~~g~ 402 (448)
+++++.+..|.|.-++|++
T Consensus 238 ~~eeva~~t~~N~~~lf~~ 256 (256)
T COG0084 238 SAEEVAEITTENAKRLFGL 256 (256)
T ss_pred CHHHHHHHHHHHHHHHhcC
Confidence 9999999999999888864
No 138
>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=96.47 E-value=0.37 Score=45.12 Aligned_cols=155 Identities=15% Similarity=0.128 Sum_probs=85.4
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecc-cCCh-hhHHHHHhCCcEEeeccc
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-HLAS-GTAARFGDQGIVASMQPQ 310 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~-~~~~-~~i~~~~~~gv~~~~~P~ 310 (448)
.+..|+.+.+..++.|.|+++|..+-. ..++.++-+. ..|..-.+..|.|+. ..++ .-.+.++.+|+++++--.
T Consensus 150 Eek~lrAaA~A~~~Tg~Pi~tHt~~gt---~g~eq~~il~-~egvdl~~v~igH~d~n~dd~~y~~~l~~~Ga~l~fD~i 225 (316)
T COG1735 150 EEKSLRAAARAHKETGAPISTHTPAGT---MGLEQLRILA-EEGVDLRKVSIGHMDPNTDDVYYQKKLADRGAFLEFDRI 225 (316)
T ss_pred HHHHHHHHHHHhhhcCCCeEEeccchh---hhHHHHHHHH-HcCCChhHeeEeccCCCCChHHHHHHHHhcCceEEeccc
Confidence 456677778888889999999997532 4455544333 345555688999998 4344 345677888998875322
Q ss_pred cccCchhHHHHhcCHhhhhhhhhhHHHHHHcCC--ceeecCCCCCCCCCH-HHHHHHHHcCCCCCCCC----CCCCCCCC
Q 013175 311 HLLDDADSARKKLGVDRAERESYLFQSLLANNA--LLALGSDWPVADINP-LCAIRTAMKRIPPGWDN----AWIPSERI 383 (448)
Q Consensus 311 ~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv--~v~~gSD~p~~~~~p-~~~~~~a~~r~~~~~~~----~~~~~~~l 383 (448)
= .+. ....+ ....|+..+.+.|. .+.+|-|..+-..+. ...+..+......+.-. +...+.++
T Consensus 226 G----~d~---y~pd~---~r~~~~~~l~~~gy~d~i~ls~d~~~~~~~~~~~~~~~~~~~~g~~~I~~~fIP~Lk~~Gv 295 (316)
T COG1735 226 G----KDK---YYPDE---DRIAPLLELVARGYADLILLSHDDICLSDDVFLKSMLKANGGWGYGYILNDFIPRLKRHGV 295 (316)
T ss_pred C----ccc---cCcHH---HhhhhHHHHHHhhHhhheecccchhhhhhhHHHHhhhhhcCCcccchhhHhhHHHHHHcCC
Confidence 1 110 11111 23557788888887 345552322222222 23333222222111100 11235678
Q ss_pred CHHHHHH-HHhHHHHHHccc
Q 013175 384 SLTDALI-AHTLSAARACFL 402 (448)
Q Consensus 384 s~~~al~-~~T~n~A~~~g~ 402 (448)
+ +++++ +.--||+++|..
T Consensus 296 d-e~~i~~mlvdNP~r~f~~ 314 (316)
T COG1735 296 D-EETIDTMLVDNPARLFTA 314 (316)
T ss_pred C-HHHHHHHHhhCHHHHhcc
Confidence 8 45554 445699999864
No 139
>TIGR01429 AMP_deaminase AMP deaminase. This model describes AMP deaminase, a large, well-conserved eukaryotic protein involved in energy metabolism. Most members of the family have an additional, poorly alignable region of 150 amino acids or more N-terminal to the region included in the model.
Probab=95.88 E-value=0.06 Score=55.65 Aligned_cols=122 Identities=14% Similarity=0.081 Sum_probs=78.6
Q ss_pred CcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCC--hhhHHHHHhCCcEEeeccccccCchhHHHHhcCHh
Q 013175 249 LQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVD 326 (448)
Q Consensus 249 ~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~--~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~ 326 (448)
+.+..||-+....+.+.+++ . + ..+|.|+..+. +....++...+|.+++||.+... .+. .
T Consensus 439 ~~LrpHaGEag~~e~l~~A~--L----~----adRIgHGi~l~~dp~L~yl~~~~qI~LevCPtSN~~-------l~~-~ 500 (611)
T TIGR01429 439 FLLRPHCGEAGSVDHLVSAF--L----T----SHGINHGILLRKVPVLQYLYYLTQIPIAMSPLSNNS-------LFL-E 500 (611)
T ss_pred cceeecCCCCCCHHHHHHHh--h----c----CcccccceecCCCHHHHHHHHHcCCeEEEcCCcchh-------hcc-C
Confidence 44889997554445455554 1 1 45788987663 45556667899999999998431 111 1
Q ss_pred hhhhhhhhHHHHHHcCCceeecCCCCCC-CC--CHH-HHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHccc
Q 013175 327 RAERESYLFQSLLANNALLALGSDWPVA-DI--NPL-CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 402 (448)
Q Consensus 327 r~~~~~~~~~~~~~~Gv~v~~gSD~p~~-~~--~p~-~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~ 402 (448)
-...|++.++++|++|+++||.|.. .. .|+ .+...+.. ..++|..+..++ +.|+....+.
T Consensus 501 ---y~~HP~~~~~~~Gl~VSLsTDDPl~f~~T~epL~EEY~~aa~------------~~~Ls~~Dl~eL-arNSV~~S~~ 564 (611)
T TIGR01429 501 ---YSKNPLPEYLHKGLNVSLSTDDPLQFHYTKEALMEEYAIAAQ------------VWKLSTCDMCEL-ARNSVLQSGF 564 (611)
T ss_pred ---hhhChHHHHHHCCCeEEEcCCCchhhCCCCCcHHHHHHHHHH------------HhCCCHHHHHHH-HHHHHHHhCC
Confidence 1245899999999999999999842 22 344 33333322 124787666544 6788888887
Q ss_pred CC
Q 013175 403 EN 404 (448)
Q Consensus 403 ~~ 404 (448)
+.
T Consensus 565 ~~ 566 (611)
T TIGR01429 565 EH 566 (611)
T ss_pred CH
Confidence 64
No 140
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring. AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway.
Probab=95.61 E-value=0.062 Score=54.46 Aligned_cols=123 Identities=15% Similarity=0.101 Sum_probs=79.2
Q ss_pred CCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCC--hhhHHHHHhCCcEEeeccccccCchhHHHHhcCH
Q 013175 248 GLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQPQHLLDDADSARKKLGV 325 (448)
Q Consensus 248 g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~--~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~ 325 (448)
-+.+..||-+....+.+.+++ . + ..+|.|+..+. +.....+...+|.+++||.+-.. .+..
T Consensus 326 tf~~r~HaGE~g~~~~l~~al--L----~----adRIGHGv~l~~dp~L~~l~~~~qI~levCPlSN~~-------l~~~ 388 (496)
T cd01319 326 TFVLRPHCGEAGDIDHLASAF--L----L----AHGISHGINLRKVPVLQYLYYLTQIGIAMSPLSNNS-------LFLS 388 (496)
T ss_pred CcceeeecCCCCChHHHHHHh--h----c----CcccccccccCCCHHHHHHHHHcCCeEEEecCccHh-------hhcC
Confidence 368899997655555555554 1 1 35788988664 34445567789999999998421 1111
Q ss_pred hhhhhhhhhHHHHHHcCCceeecCCCCCC-CC--CHH-HHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcc
Q 013175 326 DRAERESYLFQSLLANNALLALGSDWPVA-DI--NPL-CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACF 401 (448)
Q Consensus 326 ~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~-~~--~p~-~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g 401 (448)
-...|++.++++|++|+++||.|.. .. .|+ .+...+.. ..++|..+. ..++.|+....+
T Consensus 389 ----~~~HP~~~~l~~Gl~VsInTDDPl~f~~t~~~L~eEY~~a~~------------~~~Ls~~Dl-~eLarNSV~~Sf 451 (496)
T cd01319 389 ----YEKNPFPEFFKRGLNVSLSTDDPLQFHFTKEPLMEEYSIAAQ------------VWKLSTCDM-CELARNSVLQSG 451 (496)
T ss_pred ----cccChHHHHHHCCCeEEEeCCCchhhCCCCCcHHHHHHHHHH------------HcCCCHHHH-HHHHHHHHHHhC
Confidence 1245899999999999999999842 22 244 33333332 124777665 455778888887
Q ss_pred cCC
Q 013175 402 LEN 404 (448)
Q Consensus 402 ~~~ 404 (448)
.+.
T Consensus 452 ~~~ 454 (496)
T cd01319 452 FEH 454 (496)
T ss_pred CCH
Confidence 754
No 141
>PLN03055 AMP deaminase; Provisional
Probab=95.37 E-value=0.093 Score=54.11 Aligned_cols=122 Identities=17% Similarity=0.131 Sum_probs=80.0
Q ss_pred CcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccC--ChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHh
Q 013175 249 LQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL--ASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVD 326 (448)
Q Consensus 249 ~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~--~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~ 326 (448)
+.+..||-+....+.+..++ .+ -.+|.|+..+ ++..+.++...+|.+++||.+... .+. .
T Consensus 417 ~~~rpHAGEag~~~~v~~al------L~----a~RIgHGi~l~~dP~L~yl~~~~qI~LevCPlSN~~-------l~~-~ 478 (602)
T PLN03055 417 IKFRPHAGEAGDIDHLAAAF------LL----AHNIAHGNNLRKSPGLQYLYYLAQIGLAMSPLSNNS-------LFL-D 478 (602)
T ss_pred CCccccCCCCCCHHHHHHHh------hC----CceecCccccCCCHHHHHHHHHcCCeEEEccCcchh-------hcc-c
Confidence 66789996543334333433 12 4688898755 467788889999999999998431 111 1
Q ss_pred hhhhhhhhHHHHHHcCCceeecCCCCCC-C--CCHH-HHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHccc
Q 013175 327 RAERESYLFQSLLANNALLALGSDWPVA-D--INPL-CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 402 (448)
Q Consensus 327 r~~~~~~~~~~~~~~Gv~v~~gSD~p~~-~--~~p~-~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~ 402 (448)
-...|++.++++|++|+++||.|.- . ..|+ .+...+.. .-++|..+. .-++.|+..+.+.
T Consensus 479 ---y~~HP~~~~~~~Gl~VSInTDDPl~f~tT~epL~eEY~~aa~------------~~~LS~~DL-~eLarNSV~~Sf~ 542 (602)
T PLN03055 479 ---YHRNPFPMFFARGLNVSLSTDDPLQIHLTKEPLVEEYSIAAQ------------VWKLSSCDL-CEIARNSVLQSGF 542 (602)
T ss_pred ---hhhChHHHHHHCCCEEEEcCCCcchhcCCCCcHHHHHHHHHH------------HhCCCHHHH-HHHHHHHHHHhcC
Confidence 1245899999999999999999842 2 2233 44433332 124787776 4457788888887
Q ss_pred CC
Q 013175 403 EN 404 (448)
Q Consensus 403 ~~ 404 (448)
+.
T Consensus 543 ~~ 544 (602)
T PLN03055 543 PH 544 (602)
T ss_pred CH
Confidence 53
No 142
>KOG2902 consensus Dihydroorotase [Nucleotide transport and metabolism]
Probab=95.14 E-value=0.21 Score=44.80 Aligned_cols=166 Identities=13% Similarity=0.187 Sum_probs=91.3
Q ss_pred HHhcCcceeEeCccCCCCCccccchHHHHHHHHHHHhc--CCCeeEEEEccCCc-chhhHHHHHHhcCCcCCCCeeeCce
Q 013175 125 ALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYS--EKMKIRVCLFFPLE-TWSSLADLINKTGHVLSDWVYLGGV 201 (448)
Q Consensus 125 ~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~irv~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~ 201 (448)
.+++|+.-..-|++..|+..+ .+..+ .|+..... .+...-..+|+.-. ..+.+.+..+. -.+.|+
T Consensus 30 ~a~ggvs~AyvMPNL~PPiTt---~da~i-~YkK~i~kL~skttfLMslYLs~~ttPe~I~eAa~~--------~~irgV 97 (344)
T KOG2902|consen 30 SASGGVSRAYVMPNLKPPITT---TDAAI-IYKKFIMKLPSKTTFLMSLYLSDKTTPEEIREAAES--------GVIRGV 97 (344)
T ss_pred cccCceeEEEEcCCCCCCcch---HHHHH-HHHHHHHhcCccceeEEEEeecCCCCHHHHHHHHHh--------CceeeE
Confidence 357788888888876655442 22333 34433221 11222222232211 12222222211 136789
Q ss_pred EEEecCCcCCCCccccCCcCCCCCCCcccCCCHHHHHHHHHHHHHCCCcEEEEecchHHH--------HHHHHHHHHhHH
Q 013175 202 KAFADGSLGSNSALFHEPYADEPHNYGLQVMELESLLSMTMASDKSGLQVAIHAIGDRAN--------DLVLDMYKSVVV 273 (448)
Q Consensus 202 K~f~DG~~~~~ta~~~~py~~~~~~~g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~--------~~~l~a~~~~~~ 273 (448)
|.+.-|....- ..|... .-+.+.-++++..+.|+++.+|-+-+..+ ...|..+.++.+
T Consensus 98 K~YPaGaTTNS-------------~~GV~~-~f~~fyPvf~aMqe~nm~LnvHGEvpps~D~~Vf~aE~~Flptll~Lhq 163 (344)
T KOG2902|consen 98 KLYPAGATTNS-------------QDGVTD-LFGKFYPVFEAMQEQNMPLNVHGEVPPSIDGHVFDAEKIFLPTLLQLHQ 163 (344)
T ss_pred EeccCcccccc-------------cccccc-cchhhhHHHHHHHHcCceEEecCCCCCccCCceecchhhhHHHHHHHHH
Confidence 99987753211 112211 12445677888889999999998654332 233444444444
Q ss_pred hcCCCCCCCeEEecccCCh-hhHHHHHhCCcEEeeccccccCchhH
Q 013175 274 TTGKRDQRFRIEHAQHLAS-GTAARFGDQGIVASMQPQHLLDDADS 318 (448)
Q Consensus 274 ~~~~~~~r~~i~H~~~~~~-~~i~~~~~~gv~~~~~P~~~~~~~~~ 318 (448)
+.+ .....++||...+. +.++-.++-.|..+++++|++.+.+.
T Consensus 164 rfP--~LKivlEHcTt~dAv~~ve~a~~~sVaaTvTahHL~Lt~~d 207 (344)
T KOG2902|consen 164 RFP--QLKIVLEHCTTMDAVNFVESAKEGSVAATVTAHHLLLTRND 207 (344)
T ss_pred hCc--cceeHHHhcccHHHHHHHHhhcCCceeeEeehheeEEehhh
Confidence 443 45778899987665 34444556668889999998876543
No 143
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=94.74 E-value=0.17 Score=47.30 Aligned_cols=140 Identities=16% Similarity=0.081 Sum_probs=75.3
Q ss_pred HHHHHHHHHCCCcEEEEec--ch---HHHHHHHHHHHHhHHhcCCCCCCCeEEecccC--Ch-hhHHHHHh-CCcEEeec
Q 013175 238 LSMTMASDKSGLQVAIHAI--GD---RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL--AS-GTAARFGD-QGIVASMQ 308 (448)
Q Consensus 238 ~~~~~~a~~~g~~v~iHa~--gd---~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~--~~-~~i~~~~~-~gv~~~~~ 308 (448)
..+++.|.++|++|.+|+. +. .........+..+..+++ +.+..+.|+... .- +.+..+++ .++.+.++
T Consensus 120 ~~~~~~~~~~~~pv~~H~g~~~~~~~~~~~~~~~~~~~~~~~~P--~l~ii~~H~G~~~~~~~~~~~l~~~~~nvy~d~s 197 (273)
T PF04909_consen 120 DPIFEAAEELGLPVLIHTGMTGFPDAPSDPADPEELEELLERFP--DLRIILAHLGGPFPWWEEALRLLDRFPNVYVDLS 197 (273)
T ss_dssp HHHHHHHHHHT-EEEEEESHTHHHHHHHHHHHHHHHTTHHHHST--TSEEEESGGGTTHHHHHHHHHHHHHHTTEEEECH
T ss_pred HHHHHHHHhhccceeeeccccchhhhhHHHHHHHHHHHHHHHhc--CCeEEEecCcccchhHHHHHHHHHhCCccccccc
Confidence 5899999999999999964 11 111122333444555554 468889999887 22 33444444 34666543
Q ss_pred ccc--ccCchhHHHHhcCHhhhhhhhhhHHHHHHc-CC-ceeecCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCCCCCC
Q 013175 309 PQH--LLDDADSARKKLGVDRAERESYLFQSLLAN-NA-LLALGSDWPVADIN-PLCAIRTAMKRIPPGWDNAWIPSERI 383 (448)
Q Consensus 309 P~~--~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~-Gv-~v~~gSD~p~~~~~-p~~~~~~a~~r~~~~~~~~~~~~~~l 383 (448)
-.. ..... .. .....++.+++. |. ++.+|||+|..... +.......... ..+
T Consensus 198 ~~~~~~~~~~--------~~---~~~~~l~~~~~~~g~drilfGSD~P~~~~~~~~~~~~~~~~~------------~~l 254 (273)
T PF04909_consen 198 GIPPFWYFWP--------PS---FDRPFLRRAVDEFGPDRILFGSDYPHPDGASPYEYIWEAYFL------------DDL 254 (273)
T ss_dssp SHHSSEEEET--------TH---HCHHHHHHHHHHHTGGGEEEE--TTSSTHHHHHHHHHHHHHH------------HHS
T ss_pred ccccccccCc--------cc---ccHHHHHHHHHHhCCceEEecCCCCCCCccccHHHHHHhhhc------------cCC
Confidence 211 00000 00 111233444433 33 78999999976542 22222221110 015
Q ss_pred CHHHHHHHHhHHHHHHccc
Q 013175 384 SLTDALIAHTLSAARACFL 402 (448)
Q Consensus 384 s~~~al~~~T~n~A~~~g~ 402 (448)
|.++.=+.+..|+++++++
T Consensus 255 ~~~~~~~i~~~NA~rl~~l 273 (273)
T PF04909_consen 255 SEEEREKILYDNARRLYGL 273 (273)
T ss_dssp SHHHHHHHHTHHHHHHHTC
T ss_pred CHHHHHHHHhHhHHHHcCc
Confidence 8888889999999999875
No 144
>PLN02768 AMP deaminase
Probab=94.45 E-value=0.21 Score=52.91 Aligned_cols=122 Identities=15% Similarity=0.105 Sum_probs=78.4
Q ss_pred CcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccC--ChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHh
Q 013175 249 LQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL--ASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVD 326 (448)
Q Consensus 249 ~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~--~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~ 326 (448)
+.+..||-+....+.+.+++ . + -.+|.|+..+ ++....++...+|.+++||.+... .+. .
T Consensus 650 f~fRPHAGEag~~e~I~~Al--L----~----AdRIgHGv~l~kdP~LqyL~~l~qIgLevCPlSN~~-------l~~-~ 711 (835)
T PLN02768 650 IKFRPHSGEAGDIDHLAATF--L----T----CHNIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNS-------LFL-D 711 (835)
T ss_pred cccccccCCCCCHHHHHHHH--h----c----CCccCCccccCcCHHHHHHHHHcCCeEEECCCcchh-------hhc-c
Confidence 56889997544445555554 1 1 3477787755 355566777889999999998431 111 1
Q ss_pred hhhhhhhhHHHHHHcCCceeecCCCCCC-CC--CHH-HHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHccc
Q 013175 327 RAERESYLFQSLLANNALLALGSDWPVA-DI--NPL-CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 402 (448)
Q Consensus 327 r~~~~~~~~~~~~~~Gv~v~~gSD~p~~-~~--~p~-~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~ 402 (448)
-...|++.++++|++|+++||.|.. .. .|+ .+...+.. ..++|..+..++ +.|+..+.+.
T Consensus 712 ---y~~HPf~~f~~~GL~VSLNTDDPL~fhtT~epL~EEYsvAak------------~~~LS~~DL~EL-arNSV~aSff 775 (835)
T PLN02768 712 ---YHRNPFPMFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAAS------------VWKLSSCDLCEI-ARNSVYQSGF 775 (835)
T ss_pred ---hhhChHHHHHHCCCEEEEcCCCccccCCCCCCHHHHHHHHHH------------HhCcCHHHHHHH-HHHHHHHhcC
Confidence 1246999999999999999999843 22 244 33333322 124787666554 6788888887
Q ss_pred CC
Q 013175 403 EN 404 (448)
Q Consensus 403 ~~ 404 (448)
+.
T Consensus 776 ~~ 777 (835)
T PLN02768 776 SH 777 (835)
T ss_pred CH
Confidence 63
No 145
>PTZ00310 AMP deaminase; Provisional
Probab=94.21 E-value=0.22 Score=56.05 Aligned_cols=122 Identities=14% Similarity=0.065 Sum_probs=80.2
Q ss_pred CcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccC--ChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHh
Q 013175 249 LQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL--ASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVD 326 (448)
Q Consensus 249 ~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~--~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~ 326 (448)
+.+..||-+....+...+++ . + -.+|.|+..+ ++..+.++...+|.+++||.+... .+. .
T Consensus 1110 f~~rpHAGEag~~~hI~~Al--L----~----a~RIgHGi~l~~dp~L~yl~~l~qI~LevCPlSN~~-------l~~-s 1171 (1453)
T PTZ00310 1110 FALRPHCGESGSMDHLYGAF--L----C----ANSICHGINLRNDPPMQYLYYLAQIGLHVSPLSNNA-------LFL-A 1171 (1453)
T ss_pred cCccccCCCCCCHHHHHHHH--h----C----CccccchhhhCcCHHHHHHHHHcCCeEEECCCchHh-------hhh-c
Confidence 47889997544445555554 1 2 3579998866 456666788899999999998421 111 1
Q ss_pred hhhhhhhhHHHHHHcCCceeecCCCCCC-CC--CHHHHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHcccC
Q 013175 327 RAERESYLFQSLLANNALLALGSDWPVA-DI--NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 403 (448)
Q Consensus 327 r~~~~~~~~~~~~~~Gv~v~~gSD~p~~-~~--~p~~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~~ 403 (448)
-...|+++++++|++|+++||.|.. .. .|+..=+..+.. ..++|..+..++ ..|+..+.|.+
T Consensus 1172 ---y~~hP~~~f~~~Gl~VSLnTDDPl~f~tT~EpL~eEYsiaa~-----------~~~LS~~Dl~el-arNSV~~SGf~ 1236 (1453)
T PTZ00310 1172 ---FLENPFPVFFHRGLNVSLSTDDPLMFHQTQEPLIEEYSIAAR-----------VWGLSLNDLCEI-ARNSVLQSGFD 1236 (1453)
T ss_pred ---hhhCcHHHHHHCCCEEEECCCCccccCCCcccHHHHHHHHHH-----------HhCCCHHHHHHH-HHHHHHHcCCC
Confidence 1246999999999999999999842 22 344332222221 124787776554 67999888876
No 146
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=93.22 E-value=0.94 Score=42.43 Aligned_cols=106 Identities=11% Similarity=0.103 Sum_probs=60.7
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCC----------hhhHHHHHhCC
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA----------SGTAARFGDQG 302 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~----------~~~i~~~~~~g 302 (448)
+.+.+.+.++.+.++|+++.+|+.. ... ..+....... +.+..+.|+.... .+.++.++.-+
T Consensus 108 ~~~~~~~~~~~~~~~gl~v~~~~~~-~~l----~~l~~l~~~~---~l~ivldH~G~p~~~~~~~~~~~~~~l~~l~~pN 179 (263)
T cd01311 108 NKDELDEIAKRAAELGWHVQVYFDA-VDL----PALLPFLQKL---PVAVVIDHFGRPDVTKGVDGAEFAALLKLIEEGN 179 (263)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeCH-hhH----HHHHHHHHHC---CCCEEEECCCCCCCCCCCCCHhHHHHHHHHhcCC
Confidence 5677889999999999999999853 222 2333334433 4688999988643 12233332345
Q ss_pred cEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCC-ceeecCCCCCC
Q 013175 303 IVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNA-LLALGSDWPVA 354 (448)
Q Consensus 303 v~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv-~v~~gSD~p~~ 354 (448)
|.+.++-.+..... ..... ...+-++.+.+.|. .+.+|||+|++
T Consensus 180 V~~k~Sg~~~~~~~-----~~~~~---~~~~~~~~~~~~g~dRlmfGSD~P~~ 224 (263)
T cd01311 180 VWVKVSGPYRLSVK-----QEAYA---DVIAFARQIVAAAPDRLVWGTDWPHP 224 (263)
T ss_pred EEEEecchhhcCCC-----CCCHH---HHHHHHHHHHHhCCCcEEEeCCCCCC
Confidence 66665443211100 01111 11223444555554 68899999975
No 147
>PRK06361 hypothetical protein; Provisional
Probab=93.19 E-value=0.33 Score=43.87 Aligned_cols=97 Identities=11% Similarity=-0.005 Sum_probs=64.3
Q ss_pred CCeEEecccCChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCCCCCHHH
Q 013175 281 RFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLC 360 (448)
Q Consensus 281 r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~~~p~~ 360 (448)
-..+.|...+..+.++.+++.|+.++++...... ... ..-++...+.|+++++|||+. .+.+..
T Consensus 114 ~dvlaHpd~~~~~~~~~~~~~~~~lEin~~~~~~--------~~~------~~~l~~a~~~gi~vv~~SDaH-~~~d~~- 177 (212)
T PRK06361 114 VDILAHPGLITEEEAELAAENGVFLEITARKGHS--------LTN------GHVARIAREAGAPLVINTDTH-APSDLI- 177 (212)
T ss_pred CcEecCcchhhHHHHHHHHHcCeEEEEECCCCcc--------cch------HHHHHHHHHhCCcEEEECCCC-CHHHHH-
Confidence 4677888777778889999999999987532110 000 113455667799999999975 333332
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHccc
Q 013175 361 AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 402 (448)
Q Consensus 361 ~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~ 402 (448)
.+..+..- ....+++.++++.+.+.||+.++++
T Consensus 178 ~~~~~~~i---------~~~~gl~~~~v~~~~~~~~~~~~~~ 210 (212)
T PRK06361 178 TYEFARKV---------ALGAGLTEKELEEALENNPKLLLKR 210 (212)
T ss_pred HHHHHHHH---------HcCCCCCHHHHHHHHHHhHHHHHHh
Confidence 22222211 1345689999999999999999864
No 148
>PTZ00310 AMP deaminase; Provisional
Probab=92.82 E-value=0.44 Score=53.70 Aligned_cols=123 Identities=16% Similarity=0.072 Sum_probs=77.0
Q ss_pred CcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCC-hhhHH-HHHhCCcEEeeccccccCchhHHHHhcCHh
Q 013175 249 LQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA-SGTAA-RFGDQGIVASMQPQHLLDDADSARKKLGVD 326 (448)
Q Consensus 249 ~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~-~~~i~-~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~ 326 (448)
+.+.-||.....++..+.+|-- -.+|.|+..+. ...+. .+...+|.+++||.+..... . ..
T Consensus 480 f~LRPhcgeag~~dhLv~~fLl----------adRI~HGi~l~d~p~LqyL~~e~qI~LeVCPlSN~~l~------v-~s 542 (1453)
T PTZ00310 480 LQLRPSGEKAPAYDQLISSYLL----------GDVITRATSIADYPVLQYLCGLHRVGLTVSPLRDHALS------I-TA 542 (1453)
T ss_pred EEecCCCCCCCCHHHHHHHHHh----------hccccchhccCchHHHHHHHHHcCCeEEECCCcccccC------C-Cc
Confidence 5566787665555555544421 35788886553 33444 44589999999999843221 0 11
Q ss_pred hhhhhhhhHHHHHHcCCceeecCCCCCC-CC--CHH-HHHHHHHcCCCCCCCCCCCCCCCCCHHHHHHHHhHHHHHHccc
Q 013175 327 RAERESYLFQSLLANNALLALGSDWPVA-DI--NPL-CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 402 (448)
Q Consensus 327 r~~~~~~~~~~~~~~Gv~v~~gSD~p~~-~~--~p~-~~~~~a~~r~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~~g~ 402 (448)
-...|++.++++|++|++.||.|.- .. +|+ .+...+.. ..++|..+..++ +.|+..+.+.
T Consensus 543 ---y~~HPi~~fl~~GL~VSLNTDDPl~F~tt~EpL~EEY~iaaq------------~~gLS~~DL~eL-arNSV~aSf~ 606 (1453)
T PTZ00310 543 ---YFDHPLPKFLHRCLRVSISTSDPLYFHHHSQPLIEEYATAMK------------LFSLSPLDTTEL-ARNSVLNSSF 606 (1453)
T ss_pred ---hhhCcHHHHHHCCCEEEECCCCccccCCCCccHHHHHHHHHH------------HhCcCHHHHHHH-HHHHHHHhCC
Confidence 1246999999999999999999843 22 244 33333322 224787766554 6788887777
Q ss_pred CC
Q 013175 403 EN 404 (448)
Q Consensus 403 ~~ 404 (448)
+.
T Consensus 607 ~~ 608 (1453)
T PTZ00310 607 PP 608 (1453)
T ss_pred CH
Confidence 53
No 149
>KOG3020 consensus TatD-related DNase [Replication, recombination and repair]
Probab=90.10 E-value=5.5 Score=37.65 Aligned_cols=73 Identities=14% Similarity=0.139 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeecccccc
Q 013175 235 ESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLL 313 (448)
Q Consensus 235 ~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~~~ 313 (448)
..+++.++.|.+..+|+.+|+-. +.+..++.+++..... .+-.+.|+..-+.+++.++.+.|+.+.+.+..+.
T Consensus 135 ~vFekQl~LA~~~~~Pl~iH~r~--a~~d~~eIl~~~~~~~----~~~vvvHsFtGs~e~~~~~lk~~~yig~~g~~~k 207 (296)
T KOG3020|consen 135 TVFEKQLDLAKRLKLPLFIHCRS--AHEDLLEILKRFLPEC----HKKVVVHSFTGSAEEAQKLLKLGLYIGFTGCSLK 207 (296)
T ss_pred HHHHHHHHHHHHccCCeeeechh--hhHHHHHHHHHhcccc----CCceEEEeccCCHHHHHHHHHccEEecccceeee
Confidence 46788899999999999999975 5566666666553322 1247899999999999999999988888777654
No 150
>PRK00912 ribonuclease P protein component 3; Provisional
Probab=89.55 E-value=7.7 Score=35.63 Aligned_cols=149 Identities=15% Similarity=0.040 Sum_probs=82.4
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEeccc------CChhhHHHHHhCCcEEe
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQH------LASGTAARFGDQGIVAS 306 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~------~~~~~i~~~~~~gv~~~ 306 (448)
+.+.+..+++...+.--.|.+|...+...+ .+.. .+ .-..|.|... .....++.+++.|+.++
T Consensus 67 ~~~~~~~~~~~~~~~~d~v~v~~~~~~~~~-------~a~~-~~---~vdIi~hp~~~~~~~~~~~~~~~~a~~~gv~lE 135 (237)
T PRK00912 67 NPSKLRGLVGKFRKKVDVLAVHGGDEKVNR-------AACE-NP---RVDILSHPYTKRKDSGINHVLAKEAARNNVAIE 135 (237)
T ss_pred CHHHHHHHHHhccCcccEEEEeCCCHHHHH-------HHHc-cC---CCcEEeCccccCCCCCcCHHHHHHHHHCCeEEE
Confidence 345666666654432234568843322211 1111 12 2456777654 23456677888999998
Q ss_pred eccccccCchhHHHHhcCHhhhhhhhh----hHHHHHHcCCceeecCCCCCC--CCCHHHHHHHHHcCCCCCCCCCCCCC
Q 013175 307 MQPQHLLDDADSARKKLGVDRAERESY----LFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPS 380 (448)
Q Consensus 307 ~~P~~~~~~~~~~~~~~g~~r~~~~~~----~~~~~~~~Gv~v~~gSD~p~~--~~~p~~~~~~a~~r~~~~~~~~~~~~ 380 (448)
++-..+... .+..|. ...+ -++...+.|+++++|||+... -.+|...+..+- .
T Consensus 136 In~s~~~~~-------~~~~r~-~~~~~~~~~~~~~~~~g~piiisSdAh~~~~l~~~~~~~~l~~-------------~ 194 (237)
T PRK00912 136 FNLRDILKS-------RGGRRA-RTLSNFRDNLALARKYDFPLVLTSGAMSCYDLRSPREMIALAE-------------L 194 (237)
T ss_pred EEchHhhhh-------cccHHH-HHHHHHHHHHHHHHhcCCCEEEeCCCCcccccCCHHHHHHHHH-------------H
Confidence 765543211 111111 1122 234456679999999997432 123433333221 2
Q ss_pred CCCCHHHHHHHHhHHHHHHcccC-CCcccccCCC
Q 013175 381 ERISLTDALIAHTLSAARACFLE-NDVGSLSPGK 413 (448)
Q Consensus 381 ~~ls~~~al~~~T~n~A~~~g~~-~~~Gsi~~Gk 413 (448)
-+++.++++.+.+.+|.+++..- .+.+.|..|.
T Consensus 195 ~Gl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 228 (237)
T PRK00912 195 FGMEEDEALKALSYYPESIIKKNRNRKNYVIEGV 228 (237)
T ss_pred cCCCHHHHHHHHHHhHHHHHHhhccCCCcccccE
Confidence 35899999999999999988654 2345555553
No 151
>COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=86.27 E-value=17 Score=34.06 Aligned_cols=142 Identities=18% Similarity=0.236 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCCh---------hhHHHHHh-CCcE
Q 013175 235 ESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS---------GTAARFGD-QGIV 304 (448)
Q Consensus 235 ~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~---------~~i~~~~~-~gv~ 304 (448)
..+++.++..+++|+++.++....+ ..+.+..+.+ ..+.++.|.||..... ..+.++++ -++.
T Consensus 124 ~~~r~~~~rL~~~gl~fdl~~~~~q----l~~~i~l~~~---~Pd~~~VldH~G~p~~~~~~~~~w~~~m~~la~~pNv~ 196 (279)
T COG3618 124 PAWRANVERLAKLGLHFDLQVDPHQ----LPDLIPLALK---APDVNFVLDHCGRPDIKINLEDPWKAALARLARRPNVW 196 (279)
T ss_pred HHHHHHHHHHHhcCCeEEEEeChhh----hHHHHHHHhh---CCCCCEEeccCCCCCccccccCHHHHHHHHHHhCCCeE
Confidence 6799999999999999999886532 3333333322 2467899999987631 23344443 3444
Q ss_pred EeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHc-C-CceeecCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCCCC
Q 013175 305 ASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLAN-N-ALLALGSDWPVADINP-LCAIRTAMKRIPPGWDNAWIPSE 381 (448)
Q Consensus 305 ~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~-G-v~v~~gSD~p~~~~~p-~~~~~~a~~r~~~~~~~~~~~~~ 381 (448)
+-+.=.+.+... ..+.+- ..+-+..+++. | -.+.+|||+|+..... +.....+ ++. +.+
T Consensus 197 ~KlSG~~~~~~~-----~w~~~~---v~p~~e~~i~~fg~dR~vfGSdwPv~~l~~~~~~~~~~-~~~-------~v~-- 258 (279)
T COG3618 197 AKLSGVYAYSDE-----SWTVED---VRPYVEELIELFGWDRFVFGSDWPVTSLESDFASWVAA-TRE-------LVP-- 258 (279)
T ss_pred EEEeeecccccC-----CCCHHH---HHHHHHHHHHhcCccceEecCCCCcccccCChHHHHHH-HHH-------HcC--
Confidence 433222211111 011111 11223333332 5 5899999999875433 3232222 221 111
Q ss_pred CCCHHHHHHHHhHHHHHHccc
Q 013175 382 RISLTDALIAHTLSAARACFL 402 (448)
Q Consensus 382 ~ls~~~al~~~T~n~A~~~g~ 402 (448)
+ +..+--+..-.||++++++
T Consensus 259 ~-~~~er~~i~~~NA~rly~~ 278 (279)
T COG3618 259 G-DAAERARILVDNARRLYRL 278 (279)
T ss_pred C-CHHHHHHHHhhCHHHHhCC
Confidence 1 5667778888899988764
No 152
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=85.74 E-value=11 Score=35.86 Aligned_cols=136 Identities=15% Similarity=0.075 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHCCCcEEEEecchHH---------HHHHHHHHHHhHHhcCCCCCCCeEEecc--cCC-hhhHHHH-Hh
Q 013175 234 LESLLSMTMASDKSGLQVAIHAIGDRA---------NDLVLDMYKSVVVTTGKRDQRFRIEHAQ--HLA-SGTAARF-GD 300 (448)
Q Consensus 234 ~~~l~~~~~~a~~~g~~v~iHa~gd~a---------~~~~l~a~~~~~~~~~~~~~r~~i~H~~--~~~-~~~i~~~-~~ 300 (448)
+..+..+++.|.++|++|.+|.-.... ....+ +.+....+ ..+..+.|+. ..- .+.+... +.
T Consensus 143 ~~~~~pi~~~a~~~gvpv~ihtG~~~~~~~~~~~~~~p~~~---~~va~~fP--~l~IVl~H~G~~~p~~~~a~~~a~~~ 217 (293)
T COG2159 143 DPRLYPIYEAAEELGVPVVIHTGAGPGGAGLEKGHSDPLYL---DDVARKFP--ELKIVLGHMGEDYPWELEAIELAYAH 217 (293)
T ss_pred ChHHHHHHHHHHHcCCCEEEEeCCCCCCcccccCCCCchHH---HHHHHHCC--CCcEEEEecCCCCchhHHHHHHHHhC
Confidence 345889999999999999999843211 11122 22233333 4688899997 332 2333322 22
Q ss_pred CCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHH-cCCceeecCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 013175 301 QGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLA-NNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIP 379 (448)
Q Consensus 301 ~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~-~Gv~v~~gSD~p~~~~~p~~~~~~a~~r~~~~~~~~~~~ 379 (448)
.++.+.+.-..-. .+.+ .-++.+.+ -.-++.+|||+|..... ..+....
T Consensus 218 ~nvy~d~s~~~~~--------~~~~-------~~~~~~~~~~~dkilFGSD~P~~~~~--~~l~~~~------------- 267 (293)
T COG2159 218 PNVYLDTSGVRPK--------YFAP-------PLLEFLKELGPDKILFGSDYPAIHPE--VWLAELD------------- 267 (293)
T ss_pred CCceeeeeccccc--------cCCh-------HHHHHHHhcccCeEEecCCCCCcCHH--HHHHHHH-------------
Confidence 3455443321100 0000 11333444 22378999999865433 2222111
Q ss_pred CCCCCHHHHHHHHhHHHHHHcccCC
Q 013175 380 SERISLTDALIAHTLSAARACFLEN 404 (448)
Q Consensus 380 ~~~ls~~~al~~~T~n~A~~~g~~~ 404 (448)
...++.+..-+..-.|+++++++..
T Consensus 268 ~l~l~~e~k~kiL~~NA~rll~l~~ 292 (293)
T COG2159 268 ELGLSEEVKEKILGENAARLLGLDP 292 (293)
T ss_pred hcCCCHHHHHHHHHHhHHHHhCcCC
Confidence 2246767777888889999999863
No 153
>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only]
Probab=83.59 E-value=12 Score=34.48 Aligned_cols=138 Identities=14% Similarity=0.131 Sum_probs=85.8
Q ss_pred cCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeecc
Q 013175 230 QVMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQP 309 (448)
Q Consensus 230 ~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P 309 (448)
...+.+.|+.+++.|+..|.+|.+|.+... ...+..+++..+..|....++.--|+.- .+......|+..|+ |
T Consensus 140 ~~~~n~vl~~a~elA~dvdc~vqLHtes~~--~~~~~~i~~~ak~~G~~~~~VVkHha~p----~v~~~~~~Gi~pSV-~ 212 (285)
T COG1831 140 WEASNEVLEYAMELAKDVDCAVQLHTESLD--EETYEEIAEMAKEAGIKPYRVVKHHAPP----LVLKCEEVGIFPSV-P 212 (285)
T ss_pred HHHHHHHHHHHHHHhhcCCCcEEEecCCCC--hHHHHHHHHHHHHhCCCcceeEeecCCc----cchhhhhcCcCCcc-c
Confidence 334567889999999999999999997533 2345667777777776444544444432 12233335665553 1
Q ss_pred ccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCCCC------CCHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 013175 310 QHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD------INPLCAIRTAMKRIPPGWDNAWIPSERI 383 (448)
Q Consensus 310 ~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~~~------~~p~~~~~~a~~r~~~~~~~~~~~~~~l 383 (448)
.. + -.+++.++.|-...+=||+--.+ ..|+..-..+. .+.....+
T Consensus 213 as------------------r--~~v~~a~~~g~~FmmETDyIDDp~RpgavL~PktVPrr~~---------~i~~~g~~ 263 (285)
T COG1831 213 AS------------------R--KNVEDAAELGPRFMMETDYIDDPRRPGAVLGPKTVPRRTR---------EILEKGDL 263 (285)
T ss_pred cc------------------H--HHHHHHHhcCCceEeecccccCcccCCCcCCccchhHHHH---------HHHHhcCC
Confidence 11 1 14677889999999999964222 12222111110 01123346
Q ss_pred CHHHHHHHHhHHHHHHcccC
Q 013175 384 SLTDALIAHTLSAARACFLE 403 (448)
Q Consensus 384 s~~~al~~~T~n~A~~~g~~ 403 (448)
+.+.+.+..-.||.+++|++
T Consensus 264 ~ee~vy~i~~E~pe~VYg~~ 283 (285)
T COG1831 264 TEEDVYRIHVENPERVYGIE 283 (285)
T ss_pred cHHHHHHHHHhCHHHHhCcc
Confidence 78888999999999999875
No 154
>COG0502 BioB Biotin synthase and related enzymes [Coenzyme metabolism]
Probab=78.81 E-value=13 Score=35.95 Aligned_cols=73 Identities=22% Similarity=0.330 Sum_probs=55.9
Q ss_pred ccCCCHHHHHHHHHHHHHCC-CcEEEEecch---HHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcE
Q 013175 229 LQVMELESLLSMTMASDKSG-LQVAIHAIGD---RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIV 304 (448)
Q Consensus 229 ~~~~~~~~l~~~~~~a~~~g-~~v~iHa~gd---~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~ 304 (448)
...++.+++.+..+.|++.| ..+++=+.+. ...+.++++++.+.+..+ ....+..+ ..+.++++++++.|+.
T Consensus 81 ~~l~~~eeIle~Ak~ak~~Ga~r~c~~aagr~~~~~~~~i~~~v~~Vk~~~~---le~c~slG-~l~~eq~~~L~~aGvd 156 (335)
T COG0502 81 RKLMEVEEILEAAKKAKAAGATRFCMGAAGRGPGRDMEEVVEAIKAVKEELG---LEVCASLG-MLTEEQAEKLADAGVD 156 (335)
T ss_pred hhcCCHHHHHHHHHHHHHcCCceEEEEEeccCCCccHHHHHHHHHHHHHhcC---cHHhhccC-CCCHHHHHHHHHcChh
Confidence 34678888999999999999 8888777654 566777777777765544 35666666 7789999999999975
Q ss_pred E
Q 013175 305 A 305 (448)
Q Consensus 305 ~ 305 (448)
.
T Consensus 157 ~ 157 (335)
T COG0502 157 R 157 (335)
T ss_pred h
Confidence 3
No 155
>COG1603 RPP1 RNase P/RNase MRP subunit p30 [Translation, ribosomal structure and biogenesis]
Probab=72.56 E-value=76 Score=28.85 Aligned_cols=148 Identities=16% Similarity=0.079 Sum_probs=85.9
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecc------cCChhhHHHHHhCCcEEe
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ------HLASGTAARFGDQGIVAS 306 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~------~~~~~~i~~~~~~gv~~~ 306 (448)
++.+++..++..+..=-.+.++-.+.+..+.++.- . ..+.|.|-. .++-..++.+++.++.++
T Consensus 62 s~~~~r~~~~kfr~~~dlI~V~~~~lkv~R~Av~~--------~---rVDil~~p~~~r~~~gldh~~a~laa~~~vale 130 (229)
T COG1603 62 SPSQLRRLVKKFRSKVDLIAVEPGSLKVNRAAVEN--------K---RVDILSHPETGRKDPGLDHVLARLAAEKGVALE 130 (229)
T ss_pred ChHHHHHHHHhhhcceeEEEEccCcHHHHHHHHhc--------c---CccEEEcccccCCCccccHHHHHHHHhcCceEE
Confidence 46788888887766545567777665554433321 1 123445521 123356788888998887
Q ss_pred eccccccCchhHHHHhcCHhhhhhhhh----hHHHHHHcCCceeecCCCC--CCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 013175 307 MQPQHLLDDADSARKKLGVDRAERESY----LFQSLLANNALLALGSDWP--VADINPLCAIRTAMKRIPPGWDNAWIPS 380 (448)
Q Consensus 307 ~~P~~~~~~~~~~~~~~g~~r~~~~~~----~~~~~~~~Gv~v~~gSD~p--~~~~~p~~~~~~a~~r~~~~~~~~~~~~ 380 (448)
+.=..+.. ..|..|+ ...- .++...+-++++.++||+- ..--+|...+..+..
T Consensus 131 isl~~ll~-------~~g~~Ra-~~l~~lr~~lrl~rk~~v~ivvtS~A~s~~elrsP~dv~sl~~~------------- 189 (229)
T COG1603 131 ISLRPLLR-------SSGYRRA-RLLSFLRSLLRLARKYDVPIVVTSDAESPLELRSPRDVISLAKV------------- 189 (229)
T ss_pred EehHHhhc-------cchhHHH-HHHHHHHHHHHHHHhcCCCEEEeCCCCChhhhcChhhHHHHHHH-------------
Confidence 64333221 2233332 1222 2344455699999999963 222356655544432
Q ss_pred CCCCHHHHHHHHhHHHHHHcccCC--CcccccCC
Q 013175 381 ERISLTDALIAHTLSAARACFLEN--DVGSLSPG 412 (448)
Q Consensus 381 ~~ls~~~al~~~T~n~A~~~g~~~--~~Gsi~~G 412 (448)
-++...||-++.+..|..++.... ..|.|.+|
T Consensus 190 lG~e~~ea~~~~~~~p~~iL~~~~~~~~~~i~~g 223 (229)
T COG1603 190 LGLEDDEAKKSLSEYPRLILRNRNRIRDGFIVPG 223 (229)
T ss_pred hCCCHHHHHHHHHHhHHHHHHHhhhcCCceEEec
Confidence 147889999999999999987321 23445554
No 156
>cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics. Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism.
Probab=66.95 E-value=25 Score=33.74 Aligned_cols=67 Identities=16% Similarity=0.249 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecc---------cCChhhHHHHHhCCcEE-
Q 013175 236 SLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ---------HLASGTAARFGDQGIVA- 305 (448)
Q Consensus 236 ~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~---------~~~~~~i~~~~~~gv~~- 305 (448)
.=++++++..+.|+.|.+=-.+++....+++. . ..+..+.|.. .+++++++.+++.|-.+
T Consensus 155 ~G~~vv~~mn~lGmiiDvSH~s~~~~~dv~~~---s-------~~PviaSHsn~ral~~h~RNltD~~i~~ia~~GGvig 224 (309)
T cd01301 155 FGKELVREMNRLGIIIDLSHLSERTFWDVLDI---S-------NAPVIASHSNARALCDHPRNLTDAQLKAIAETGGVIG 224 (309)
T ss_pred HHHHHHHHHHHcCCEEEcCCCCHHHHHHHHHh---c-------CCCEEEeccChHHhcCCCCCCCHHHHHHHHHcCCEEE
Confidence 46788888999999998543445544444433 2 1245666654 46889999999988544
Q ss_pred -eeccccc
Q 013175 306 -SMQPQHL 312 (448)
Q Consensus 306 -~~~P~~~ 312 (448)
+..|.++
T Consensus 225 i~~~~~fl 232 (309)
T cd01301 225 VNFYPAFL 232 (309)
T ss_pred EeeeHHHh
Confidence 4445554
No 157
>COG1751 Uncharacterized conserved protein [Function unknown]
Probab=64.81 E-value=80 Score=26.64 Aligned_cols=107 Identities=17% Similarity=0.158 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEe--cchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccC-------ChhhHHHHHhCCc
Q 013175 233 ELESLLSMTMASDKSGLQVAIHA--IGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL-------ASGTAARFGDQGI 303 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa--~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~-------~~~~i~~~~~~gv 303 (448)
+++.|+-+++.|.+.|+.-.+-+ .|..| +.+++.+. +.......--|..+. +++.-+.+++.|.
T Consensus 12 T~~tle~a~erA~elgik~~vVAS~tG~tA----~k~lemve---g~lkvVvVthh~Gf~e~g~~e~~~E~~~~L~erGa 84 (186)
T COG1751 12 TDETLEIAVERAKELGIKHIVVASSTGYTA----LKALEMVE---GDLKVVVVTHHAGFEEKGTQEMDEEVRKELKERGA 84 (186)
T ss_pred hHHHHHHHHHHHHhcCcceEEEEecccHHH----HHHHHhcc---cCceEEEEEeecccccCCceecCHHHHHHHHHcCc
Confidence 57889999999999998755444 34433 33333221 111111122333332 3455567889999
Q ss_pred EEeeccccccCchhHHHHhcCH-hhhhhhhhhHHHHHHcCCceee
Q 013175 304 VASMQPQHLLDDADSARKKLGV-DRAERESYLFQSLLANNALLAL 347 (448)
Q Consensus 304 ~~~~~P~~~~~~~~~~~~~~g~-~r~~~~~~~~~~~~~~Gv~v~~ 347 (448)
.+..+.+.+..-.....+++|. .+.+-....+| +.-+|+.|++
T Consensus 85 ~v~~~sHalSg~eRsis~kfGG~~p~eiiAetLR-~fg~G~KVcv 128 (186)
T COG1751 85 KVLTQSHALSGVERSISRKFGGYSPLEIIAETLR-MFGQGVKVCV 128 (186)
T ss_pred eeeeehhhhhcchhhhhhhcCCcchHHHHHHHHH-HhcCCcEEEE
Confidence 9988877654322223334442 22212223344 7888988876
No 158
>TIGR01496 DHPS dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.
Probab=62.77 E-value=35 Score=31.75 Aligned_cols=63 Identities=8% Similarity=0.093 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHC-CCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccC-ChhhHHHHHhCCcEEeeccc
Q 013175 236 SLLSMTMASDKS-GLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL-ASGTAARFGDQGIVASMQPQ 310 (448)
Q Consensus 236 ~l~~~~~~a~~~-g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~-~~~~i~~~~~~gv~~~~~P~ 310 (448)
.+..+++.+++. +.++++|......++.++++ | ...|.|++.. .++.++.+++.|+.+.+.+.
T Consensus 62 rl~~~v~~~~~~~~~plsiDT~~~~vi~~al~~--------G----~~iINsis~~~~~~~~~l~~~~~~~vV~m~~ 126 (257)
T TIGR01496 62 RVVPVIKALRDQPDVPISVDTYRAEVARAALEA--------G----ADIINDVSGGQDPAMLEVAAEYGVPLVLMHM 126 (257)
T ss_pred HHHHHHHHHHhcCCCeEEEeCCCHHHHHHHHHc--------C----CCEEEECCCCCCchhHHHHHHcCCcEEEEeC
Confidence 377788888887 99999999887766555543 3 5689998876 56677888888877766543
No 159
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=61.65 E-value=10 Score=28.59 Aligned_cols=40 Identities=15% Similarity=0.286 Sum_probs=31.0
Q ss_pred hhhhCCCCeEEEEeccCchhhhcHHHHHHcCCCCCCCCCCCC
Q 013175 39 IDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGG 80 (448)
Q Consensus 39 LD~~~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~~~~~~~~gg 80 (448)
+..+.++.||+++..+|+.++.-...|+.+|+ +...-.||
T Consensus 45 ~~~~~~~~~vvl~c~~g~~a~~~a~~L~~~G~--~v~~l~GG 84 (90)
T cd01524 45 LNELPKDKEIIVYCAVGLRGYIAARILTQNGF--KVKNLDGG 84 (90)
T ss_pred HHhcCCCCcEEEEcCCChhHHHHHHHHHHCCC--CEEEecCC
Confidence 44567889999999899999999999999998 33333454
No 160
>PF01244 Peptidase_M19: Membrane dipeptidase (Peptidase family M19); InterPro: IPR008257 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of peptidases belong to the MEROPS peptidase family M19 (membrane dipeptidase family, clan MJ). The protein fold of the peptidase domain for members of this family resembles that of Klebsiella urease, the type example for clan MJ. Renal dipeptidase (rDP) (3.4.13.19 from EC), also known as microsomal dipeptidase, is a zinc-dependent metalloenzyme that hydrolyzes a wide range of dipeptides. It is involved in renal metabolism of glutathione and its conjugates. It is a homodimeric disulphide-linked glycoprotein attached to the renal brush border microvilli membrane by a GPI-anchor. A glutamate residue has recently been shown [,] to be important for the catalytic activity of rDP. rDP seems to be evolutionary related to hypothetical proteins in the PQQ biosynthesis operons of Acinetobacter calcoaceticus and Klebsiella pneumoniae.; GO: 0008235 metalloexopeptidase activity, 0008239 dipeptidyl-peptidase activity, 0016805 dipeptidase activity, 0006508 proteolysis; PDB: 3NEH_B 2RAG_D 3LU2_A 3B40_A 3LY0_A 3FDG_B 2I5G_B 3S2J_A 3S2N_A 3S2L_A ....
Probab=60.78 E-value=13 Score=35.91 Aligned_cols=72 Identities=15% Similarity=0.175 Sum_probs=37.8
Q ss_pred HHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCC----CCCCCeEEecccCChhhHHHHHhCC--cEEeeccc
Q 013175 237 LLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGK----RDQRFRIEHAQHLASGTAARFGDQG--IVASMQPQ 310 (448)
Q Consensus 237 l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~----~~~r~~i~H~~~~~~~~i~~~~~~g--v~~~~~P~ 310 (448)
=++++++..+.|+.|.+--.++++...++ +... .|. .+.|-...|--.+++++++.+++.| |.+..+|.
T Consensus 162 G~~vV~~mn~lGm~vDvSH~s~~t~~Dv~---~~s~--~PviaSHSn~ral~~h~RNltDe~iraia~~GGviGi~~~~~ 236 (320)
T PF01244_consen 162 GREVVREMNRLGMLVDVSHLSEKTFWDVL---EISK--KPVIASHSNARALCPHPRNLTDEQIRAIAERGGVIGINFYPA 236 (320)
T ss_dssp HHHHHHHHHHHT-EEE-TTB-HHHHHHHH---HH-S--SEEEECCEEBTTTS--TTSB-HHHHHHHHHTT-EEEEESSHH
T ss_pred HHHHHHHHHHcCCeeeeccCCHHHHHHHH---hhcC--CCEEEeccChHhhCCCCCCCCHHHHHHHHHCCcEEEEEcchh
Confidence 46778888999999885334455444333 3221 110 1122223344466789999999988 44555555
Q ss_pred ccc
Q 013175 311 HLL 313 (448)
Q Consensus 311 ~~~ 313 (448)
++.
T Consensus 237 fl~ 239 (320)
T PF01244_consen 237 FLG 239 (320)
T ss_dssp HHS
T ss_pred hhc
Confidence 543
No 161
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=55.84 E-value=99 Score=27.68 Aligned_cols=73 Identities=16% Similarity=0.140 Sum_probs=55.3
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeecccc
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQH 311 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~ 311 (448)
.+.++..++++.+.+.|+.+.-=.... ...++.++++.+..+ ...+-=++.++.++++++.+.|..+.+.|.+
T Consensus 17 ~~~e~a~~~~~al~~~Gi~~iEit~~t---~~a~~~i~~l~~~~~----~~~vGAGTVl~~~~a~~a~~aGA~FivsP~~ 89 (204)
T TIGR01182 17 DDVDDALPLAKALIEGGLRVLEVTLRT---PVALDAIRLLRKEVP----DALIGAGTVLNPEQLRQAVDAGAQFIVSPGL 89 (204)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC---ccHHHHHHHHHHHCC----CCEEEEEeCCCHHHHHHHHHcCCCEEECCCC
Confidence 367888999999999999866333322 234566666655543 4667777888999999999999999999987
No 162
>PF13188 PAS_8: PAS domain; PDB: 2JHE_D 3VOL_A.
Probab=54.91 E-value=9 Score=26.59 Aligned_cols=26 Identities=15% Similarity=0.263 Sum_probs=21.7
Q ss_pred CCeEEEEeccCchhhhcHHHHHHcCCC
Q 013175 45 HNPVWLSRMDGHMGLANSVALQLVGIT 71 (448)
Q Consensus 45 ~~Pv~l~~~~~H~~~~Ns~al~~~gi~ 71 (448)
..||++.+ ++...++|.++.+++|++
T Consensus 11 ~~~i~i~d-~~~i~~~N~~~~~l~g~~ 36 (64)
T PF13188_consen 11 PDGILIID-GGRIIYVNPAFEELFGYS 36 (64)
T ss_dssp SSEEEEEE-TSBEEEE-HHHHHHHCS-
T ss_pred ccceEEEE-CCChHHhhHHHHHHhCCC
Confidence 36899999 889999999999999976
No 163
>PRK06256 biotin synthase; Validated
Probab=54.60 E-value=1.1e+02 Score=29.48 Aligned_cols=109 Identities=17% Similarity=0.144 Sum_probs=59.4
Q ss_pred CCCHHHHHHHHHHHHHCCCc-EEEEecch----HHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEE
Q 013175 231 VMELESLLSMTMASDKSGLQ-VAIHAIGD----RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVA 305 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~-v~iHa~gd----~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~ 305 (448)
..+.+++.+.++.+.+.|.. +.+-..+. ...+..++.++.+.... +..+ ..+...++++.++++++.|+..
T Consensus 90 ~~s~eeI~~~~~~~~~~g~~~~~l~~~g~~p~~~~~~~~~e~i~~i~~~~---~i~~-~~~~g~l~~e~l~~LkeaG~~~ 165 (336)
T PRK06256 90 WLDIEELIEAAKEAIEEGAGTFCIVASGRGPSGKEVDQVVEAVKAIKEET---DLEI-CACLGLLTEEQAERLKEAGVDR 165 (336)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEecCCCCCchHHHHHHHHHHHHHhcC---CCcE-EecCCcCCHHHHHHHHHhCCCE
Confidence 46888899999988888863 33333222 22345555555554321 2222 2344567899999999999753
Q ss_pred eeccccccCchhHHHHhcCH-hhhhhhhhhHHHHHHcCCcee
Q 013175 306 SMQPQHLLDDADSARKKLGV-DRAERESYLFQSLLANNALLA 346 (448)
Q Consensus 306 ~~~P~~~~~~~~~~~~~~g~-~r~~~~~~~~~~~~~~Gv~v~ 346 (448)
.... +-.+...+. .+.+ ...+.....++.+.+.|+.++
T Consensus 166 v~~~--lEts~~~~~-~i~~~~t~~~~i~~i~~a~~~Gi~v~ 204 (336)
T PRK06256 166 YNHN--LETSRSYFP-NVVTTHTYEDRIDTCEMVKAAGIEPC 204 (336)
T ss_pred EecC--CccCHHHHh-hcCCCCCHHHHHHHHHHHHHcCCeec
Confidence 3221 111222222 2221 111133456777888887654
No 164
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=53.33 E-value=1e+02 Score=27.46 Aligned_cols=73 Identities=14% Similarity=0.133 Sum_probs=54.8
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeecccc
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQH 311 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~ 311 (448)
.+.++..++++.+.+.|+.+.==.... ...++.++++.+..+ ...|-=++.++.+++++..+.|..+.+.|.+
T Consensus 13 ~~~~~a~~ia~al~~gGi~~iEit~~t---p~a~~~I~~l~~~~~----~~~vGAGTVl~~e~a~~ai~aGA~FivSP~~ 85 (201)
T PRK06015 13 DDVEHAVPLARALAAGGLPAIEITLRT---PAALDAIRAVAAEVE----EAIVGAGTILNAKQFEDAAKAGSRFIVSPGT 85 (201)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC---ccHHHHHHHHHHHCC----CCEEeeEeCcCHHHHHHHHHcCCCEEECCCC
Confidence 467889999999999999866333322 234566666655443 4667777888999999999999999999986
No 165
>PRK05588 histidinol-phosphatase; Provisional
Probab=49.62 E-value=40 Score=31.25 Aligned_cols=51 Identities=14% Similarity=0.168 Sum_probs=34.6
Q ss_pred hhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCc-eeecCCCC
Q 013175 292 SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNAL-LALGSDWP 352 (448)
Q Consensus 292 ~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~-v~~gSD~p 352 (448)
.+.++.+++.|+.+++....+.... ... ...+.++.+.+.|++ +++|||+.
T Consensus 169 ~~il~~~~~~g~~lEINt~~l~~~~-----~~~-----~~~~~l~~~~~~g~~~i~lgSDAH 220 (255)
T PRK05588 169 DEILKVLIEKEKVLEINTRRLDDKR-----SVE-----NLVKIYKRFYELGGKYITLGSDAH 220 (255)
T ss_pred HHHHHHHHHcCCEEEEECcccCCCC-----CCC-----CHHHHHHHHHHcCCcEEEEECCCC
Confidence 3556788899999998875432110 011 123467888999998 79999974
No 166
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=49.40 E-value=12 Score=28.31 Aligned_cols=27 Identities=19% Similarity=0.346 Sum_probs=22.9
Q ss_pred CeEEEEeccCchhhhcHHHHHHcCCCC
Q 013175 46 NPVWLSRMDGHMGLANSVALQLVGITN 72 (448)
Q Consensus 46 ~Pv~l~~~~~H~~~~Ns~al~~~gi~~ 72 (448)
-++++.+.+|...++|.++++.+|++.
T Consensus 2 ~~i~i~d~~g~i~~~N~~~~~~~g~~~ 28 (104)
T PF13426_consen 2 DGIFILDPDGRILYVNPAFERLFGYSR 28 (104)
T ss_dssp SEEEEEETTSBEEEE-HHHHHHHTS-H
T ss_pred EEEEEECCcCcEEehhHHHHHHHCcCH
Confidence 378999999999999999999999874
No 167
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=49.30 E-value=1e+02 Score=28.03 Aligned_cols=77 Identities=14% Similarity=0.126 Sum_probs=52.8
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeecccc
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQH 311 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~ 311 (448)
.+.++..++++.+.+.|+.+.==..... .+++.++.+....+....+..+-=++.++.++++...+.|..+.+.|.+
T Consensus 24 ~~~~~a~~~~~al~~gGi~~iEiT~~tp---~a~~~i~~l~~~~~~~~p~~~vGaGTVl~~e~a~~a~~aGA~FiVsP~~ 100 (222)
T PRK07114 24 ADVEVAKKVIKACYDGGARVFEFTNRGD---FAHEVFAELVKYAAKELPGMILGVGSIVDAATAALYIQLGANFIVTPLF 100 (222)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCC---cHHHHHHHHHHHHHhhCCCeEEeeEeCcCHHHHHHHHHcCCCEEECCCC
Confidence 3678889999999999998663333221 2334444443222111124667777888999999999999999999986
No 168
>PF06415 iPGM_N: BPG-independent PGAM N-terminus (iPGM_N); InterPro: IPR011258 This family represents the N-terminal region of the 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (or phosphoglyceromutase or BPG-independent PGAM) protein (5.4.2.1 from EC). The family is found in conjunction with Metalloenzyme (located in the C-terminal region of the protein). ; GO: 0004619 phosphoglycerate mutase activity, 0030145 manganese ion binding, 0006007 glucose catabolic process, 0005737 cytoplasm; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3IGZ_B 3IGY_B 3NVL_A 2IFY_A.
Probab=49.18 E-value=27 Score=31.62 Aligned_cols=25 Identities=28% Similarity=0.590 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHCCCc-EEEEecch
Q 013175 234 LESLLSMTMASDKSGLQ-VAIHAIGD 258 (448)
Q Consensus 234 ~~~l~~~~~~a~~~g~~-v~iHa~gd 258 (448)
.+.|..+++.|.+.|+. |.+|+..|
T Consensus 45 ~~Hl~al~~~a~~~gv~~V~vH~f~D 70 (223)
T PF06415_consen 45 IDHLFALIKLAKKQGVKKVYVHAFTD 70 (223)
T ss_dssp HHHHHHHHHHHHHTT-SEEEEEEEE-
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEecC
Confidence 67899999999999976 99999865
No 169
>COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism]
Probab=48.80 E-value=47 Score=31.78 Aligned_cols=67 Identities=16% Similarity=0.252 Sum_probs=44.3
Q ss_pred HHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecc---------cCChhhHHHHHhCC--cEE
Q 013175 237 LLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ---------HLASGTAARFGDQG--IVA 305 (448)
Q Consensus 237 l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~---------~~~~~~i~~~~~~g--v~~ 305 (448)
=+++++++++.|+.|.+--.+++....+++. ...+....|+. .+++++++.+++.| |.+
T Consensus 151 Gk~lV~~~N~LgIiiDlSH~s~kt~~Dvl~~----------s~~PviaSHSN~~al~~h~RNl~D~qlkaI~~~gGvIgv 220 (313)
T COG2355 151 GKELVREMNELGIIIDLSHLSDKTFWDVLDL----------SKAPVVASHSNARALVDHPRNLSDEQLKAIAETGGVIGV 220 (313)
T ss_pred HHHHHHHHHhcCCEEEecccCCccHHHHHhc----------cCCceEEecCCchhccCCCCCCCHHHHHHHHhcCCEEEE
Confidence 3688999999999998543445544444432 23345555654 55789999999987 455
Q ss_pred eecccccc
Q 013175 306 SMQPQHLL 313 (448)
Q Consensus 306 ~~~P~~~~ 313 (448)
+.-|.++.
T Consensus 221 ~~~~~fl~ 228 (313)
T COG2355 221 NFIPAFLR 228 (313)
T ss_pred Eeehhhcc
Confidence 66676654
No 170
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=47.82 E-value=15 Score=28.24 Aligned_cols=28 Identities=21% Similarity=0.393 Sum_probs=25.4
Q ss_pred CCeEEEEeccCchhhhcHHHHHHcCCCC
Q 013175 45 HNPVWLSRMDGHMGLANSVALQLVGITN 72 (448)
Q Consensus 45 ~~Pv~l~~~~~H~~~~Ns~al~~~gi~~ 72 (448)
..||++++.+|...++|+++.+++|++.
T Consensus 11 ~~~i~~~d~~g~I~~~N~a~~~l~g~~~ 38 (113)
T PF00989_consen 11 PDGIFVIDEDGRILYVNQAAEELLGYSR 38 (113)
T ss_dssp SSEEEEEETTSBEEEECHHHHHHHSS-H
T ss_pred CceEEEEeCcCeEEEECHHHHHHHccCH
Confidence 5899999999999999999999999874
No 171
>TIGR00433 bioB biotin synthetase. Catalyzes the last step of the biotin biosynthesis pathway.
Probab=47.78 E-value=2.4e+02 Score=26.47 Aligned_cols=110 Identities=12% Similarity=0.119 Sum_probs=55.7
Q ss_pred CCCHHHHHHHHHHHHHCCCcE-EEEecc----hHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEE
Q 013175 231 VMELESLLSMTMASDKSGLQV-AIHAIG----DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVA 305 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v-~iHa~g----d~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~ 305 (448)
..+.+++.+.++.+.+.|+.- ++-..| +......+..+.+.....+ ... ..+...++++.++++++.|+..
T Consensus 61 ~~~~eei~~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~~---i~~-~~~~g~~~~e~l~~Lk~aG~~~ 136 (296)
T TIGR00433 61 LKKVDEVLEEARKAKAAGATRFCLVASGRGPKDREFMEYVEAMVQIVEEMG---LKT-CATLGLLDPEQAKRLKDAGLDY 136 (296)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEEecCCCChHHHHHHHHHHHHHHHhCC---CeE-EecCCCCCHHHHHHHHHcCCCE
Confidence 355676766677777778643 232211 1111223344433333322 222 3555678899999999999643
Q ss_pred eeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCcee
Q 013175 306 SMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLA 346 (448)
Q Consensus 306 ~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~ 346 (448)
...-.- .+.+.+....+....+.....++.+.++|+.++
T Consensus 137 v~i~~E--~~~~~~~~i~~~~s~~~~~~ai~~l~~~Gi~v~ 175 (296)
T TIGR00433 137 YNHNLD--TSQEFYSNIISTHTYDDRVDTLENAKKAGLKVC 175 (296)
T ss_pred EEEccc--CCHHHHhhccCCCCHHHHHHHHHHHHHcCCEEE
Confidence 221111 122222221211111133446778889999864
No 172
>PRK07328 histidinol-phosphatase; Provisional
Probab=45.87 E-value=56 Score=30.56 Aligned_cols=51 Identities=16% Similarity=0.164 Sum_probs=32.0
Q ss_pred hhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCC
Q 013175 293 GTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP 352 (448)
Q Consensus 293 ~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p 352 (448)
+.++.+++.|+.+++....+... .+. .. ....-++.+.+.|+++++|||+.
T Consensus 181 ~il~~~~~~g~~lEiNt~~~r~~-------~~~-~y-p~~~il~~~~~~g~~itigSDAH 231 (269)
T PRK07328 181 EALDVIAAAGLALEVNTAGLRKP-------VGE-IY-PSPALLRACRERGIPVVLGSDAH 231 (269)
T ss_pred HHHHHHHHcCCEEEEEchhhcCC-------CCC-CC-CCHHHHHHHHHcCCCEEEeCCCC
Confidence 45677888999999877543211 110 00 01123566778899999999974
No 173
>COG0134 TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
Probab=45.81 E-value=1.9e+02 Score=26.86 Aligned_cols=79 Identities=11% Similarity=0.151 Sum_probs=49.4
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHH---------------------HHHhHHhcCCCCCCCeEEeccc
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDM---------------------YKSVVVTTGKRDQRFRIEHAQH 289 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a---------------------~~~~~~~~~~~~~r~~i~H~~~ 289 (448)
.+++++++++++.|++.|+.+-+-+......+.+++. .+++.... +.....|.-...
T Consensus 139 ~L~~~~l~el~~~A~~LGm~~LVEVh~~eEl~rAl~~ga~iIGINnRdL~tf~vdl~~t~~la~~~--p~~~~~IsESGI 216 (254)
T COG0134 139 ALDDEQLEELVDRAHELGMEVLVEVHNEEELERALKLGAKIIGINNRDLTTLEVDLETTEKLAPLI--PKDVILISESGI 216 (254)
T ss_pred hcCHHHHHHHHHHHHHcCCeeEEEECCHHHHHHHHhCCCCEEEEeCCCcchheecHHHHHHHHhhC--CCCcEEEecCCC
Confidence 4688999999999999999988777665555544431 11211111 122344444445
Q ss_pred CChhhHHHHHhCCcEEeecccc
Q 013175 290 LASGTAARFGDQGIVASMQPQH 311 (448)
Q Consensus 290 ~~~~~i~~~~~~gv~~~~~P~~ 311 (448)
.+++++.++.+.|+....-...
T Consensus 217 ~~~~dv~~l~~~ga~a~LVG~s 238 (254)
T COG0134 217 STPEDVRRLAKAGADAFLVGEA 238 (254)
T ss_pred CCHHHHHHHHHcCCCEEEecHH
Confidence 5677788887777766554444
No 174
>PRK09613 thiH thiamine biosynthesis protein ThiH; Reviewed
Probab=45.30 E-value=3.1e+02 Score=28.11 Aligned_cols=116 Identities=11% Similarity=0.142 Sum_probs=64.1
Q ss_pred cCCCHHHHHHHHHHHHHCCCcEEEEecchH----HHHHHHHHHHHhHHhcCCCC--CCCeEEecccCChhhHHHHHhCCc
Q 013175 230 QVMELESLLSMTMASDKSGLQVAIHAIGDR----ANDLVLDMYKSVVVTTGKRD--QRFRIEHAQHLASGTAARFGDQGI 303 (448)
Q Consensus 230 ~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~----a~~~~l~a~~~~~~~~~~~~--~r~~i~H~~~~~~~~i~~~~~~gv 303 (448)
..++.+++.+.++.+.+.|..-..=..|.. .++...++++.+.......+ .++.++- ..++.++++++++.|+
T Consensus 113 ~~Ls~EEI~~ea~~~~~~G~~~i~LvsGe~p~~~~~eyi~e~i~~I~~~~~~~g~i~~v~ini-g~lt~eey~~LkeaGv 191 (469)
T PRK09613 113 KKLTQEEIREEVKALEDMGHKRLALVAGEDPPNCDIEYILESIKTIYSTKHGNGEIRRVNVNI-APTTVENYKKLKEAGI 191 (469)
T ss_pred eECCHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCHHHHHHHHHHHHHhccccCcceeeEEEe-ecCCHHHHHHHHHcCC
Confidence 356899999999999999865332223332 35566666666554221111 2455553 4578899999999997
Q ss_pred EEe-eccccccCchhHHHHhc--CHhh-hhhhhhhHHHHHHcCCc-eeec
Q 013175 304 VAS-MQPQHLLDDADSARKKL--GVDR-AERESYLFQSLLANNAL-LALG 348 (448)
Q Consensus 304 ~~~-~~P~~~~~~~~~~~~~~--g~~r-~~~~~~~~~~~~~~Gv~-v~~g 348 (448)
.-- +.... .+.+.|.... |+.. .+.....++.+.++|+. |+.|
T Consensus 192 ~~~~l~qET--Y~~ety~~~hp~g~k~~y~~Rl~t~~rA~~aGi~~Vg~G 239 (469)
T PRK09613 192 GTYQLFQET--YHKPTYEKMHPSGPKSDYDWRLTAMDRAMEAGIDDVGIG 239 (469)
T ss_pred CEEEecccc--CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHcCCCeeCeE
Confidence 542 22111 0122222211 2211 11223456678888886 6655
No 175
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=44.53 E-value=16 Score=27.90 Aligned_cols=28 Identities=25% Similarity=0.458 Sum_probs=24.1
Q ss_pred CCeEEEEeccCchhhhcHHHHHHcCCCC
Q 013175 45 HNPVWLSRMDGHMGLANSVALQLVGITN 72 (448)
Q Consensus 45 ~~Pv~l~~~~~H~~~~Ns~al~~~gi~~ 72 (448)
..+|++++.+|+..++|.++.+.+|...
T Consensus 5 p~~i~v~D~~~~i~~~N~~~~~~~~~~~ 32 (110)
T PF08448_consen 5 PDGIFVIDPDGRIVYANQAAAELFGVSP 32 (110)
T ss_dssp SSEEEEEETTSBEEEE-HHHHHHHTSTH
T ss_pred CceeEEECCCCEEEEEHHHHHHHhCCCH
Confidence 3689999999999999999999998763
No 176
>PLN02389 biotin synthase
Probab=43.24 E-value=2.5e+02 Score=27.82 Aligned_cols=112 Identities=13% Similarity=0.174 Sum_probs=61.4
Q ss_pred cCCCHHHHHHHHHHHHHCCCcEE-EEe-----cc-hHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCC
Q 013175 230 QVMELESLLSMTMASDKSGLQVA-IHA-----IG-DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQG 302 (448)
Q Consensus 230 ~~~~~~~l~~~~~~a~~~g~~v~-iHa-----~g-d~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~g 302 (448)
..++.+++.+.++.+.+.|..-. +-. .+ +...+..++.+..+.+ .+ ...+ ......+.++++++++.|
T Consensus 114 ~~Ls~EeIl~~a~~~~~~G~~~~~ivts~rg~~~e~~~~e~i~eiir~ik~-~~---l~i~-~s~G~l~~E~l~~LkeAG 188 (379)
T PLN02389 114 KLMSKDDVLEAAKRAKEAGSTRFCMGAAWRDTVGRKTNFNQILEYVKEIRG-MG---MEVC-CTLGMLEKEQAAQLKEAG 188 (379)
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEEecccCCCCChhHHHHHHHHHHHHhc-CC---cEEE-ECCCCCCHHHHHHHHHcC
Confidence 35789999999999888887532 211 11 1335566666665532 22 2222 233467889999999999
Q ss_pred cEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeec
Q 013175 303 IVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALG 348 (448)
Q Consensus 303 v~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~g 348 (448)
+..-. +.+-...+.|.+..+...++.....++.+.+.|+.++.|
T Consensus 189 ld~~~--~~LeTs~~~y~~i~~~~s~e~rl~ti~~a~~~Gi~v~sg 232 (379)
T PLN02389 189 LTAYN--HNLDTSREYYPNVITTRSYDDRLETLEAVREAGISVCSG 232 (379)
T ss_pred CCEEE--eeecCChHHhCCcCCCCCHHHHHHHHHHHHHcCCeEeEE
Confidence 75321 111101112222111112223345678888899877554
No 177
>PF07908 D-aminoacyl_C: D-aminoacylase, C-terminal region; InterPro: IPR012855 D-aminoacylase (Q9AGH8 from SWISSPROT, 3.5.1.81 from EC) hydrolyses a wide variety of N-acyl derivatives of neutral D-amino acids, in a zinc-dependent manner. The enzyme is composed of a small beta-barrel domain and a larger catalytic alpha/beta-barrel that contains a short alpha/beta insert. The overall structure shares significant similarity to the alpha/beta-barrel amidohydrolase superfamily, in which the beta-strands in both barrels superimpose well []. The C-terminal region featured in this entry forms part of the beta-barrel domain, together with a short N-terminal segment. This domain does not seem to contribute to the substrate-binding site or to be involved in the catalytic process.; GO: 0008270 zinc ion binding, 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; PDB: 3GIQ_B 3GIP_B 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A.
Probab=42.47 E-value=24 Score=23.38 Aligned_cols=15 Identities=20% Similarity=0.357 Sum_probs=12.5
Q ss_pred CeeeEEEECCEEecC
Q 013175 434 ASIEATYVSGVQAYP 448 (448)
Q Consensus 434 ~~v~~t~~~G~~V~~ 448 (448)
.-+..||++|++++.
T Consensus 18 ~GI~~V~VNG~~vv~ 32 (48)
T PF07908_consen 18 EGIDYVFVNGQIVVE 32 (48)
T ss_dssp BSEEEEEETTEEEEC
T ss_pred CCEEEEEECCEEEEE
Confidence 358999999999874
No 178
>PRK12330 oxaloacetate decarboxylase; Provisional
Probab=42.42 E-value=4.1e+02 Score=27.49 Aligned_cols=38 Identities=3% Similarity=0.121 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHHHHC---CCcEEEEecchH--HHHHHHHHHH
Q 013175 232 MELESLLSMTMASDKS---GLQVAIHAIGDR--ANDLVLDMYK 269 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~---g~~v~iHa~gd~--a~~~~l~a~~ 269 (448)
.++..+.++++..++. ++++++|+..+. ++...+.+++
T Consensus 181 l~P~~~~~LV~~Lk~~~~~~ipI~~H~Hnt~GlA~An~laAie 223 (499)
T PRK12330 181 LKPQPAYDIVKGIKEACGEDTRINLHCHSTTGVTLVSLMKAIE 223 (499)
T ss_pred CCHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCcHHHHHHHHHH
Confidence 5677888888887765 689999997653 3444454443
No 179
>PRK15108 biotin synthase; Provisional
Probab=42.33 E-value=3e+02 Score=26.81 Aligned_cols=68 Identities=19% Similarity=0.238 Sum_probs=43.0
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEec----c--hHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcE
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAI----G--DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIV 304 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~----g--d~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~ 304 (448)
.++.+++.+.++.+.+.|+.-. |.. + ...++...+.++.+.+ .+ .. .+.+...++.+.++++++.|+.
T Consensus 75 ~ls~eEI~~~a~~~~~~G~~~i-~i~~~g~~p~~~~~e~i~~~i~~ik~-~~---i~-v~~s~G~ls~e~l~~LkeAGld 148 (345)
T PRK15108 75 LMEVEQVLESARKAKAAGSTRF-CMGAAWKNPHERDMPYLEQMVQGVKA-MG---LE-TCMTLGTLSESQAQRLANAGLD 148 (345)
T ss_pred CCCHHHHHHHHHHHHHcCCCEE-EEEecCCCCCcchHHHHHHHHHHHHh-CC---CE-EEEeCCcCCHHHHHHHHHcCCC
Confidence 4788999998888888886532 321 1 1234555555555542 22 22 2344556789999999999975
No 180
>PRK08392 hypothetical protein; Provisional
Probab=42.29 E-value=1.7e+02 Score=26.30 Aligned_cols=42 Identities=12% Similarity=0.054 Sum_probs=28.9
Q ss_pred HHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCC
Q 013175 295 AARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP 352 (448)
Q Consensus 295 i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p 352 (448)
++.+++.|+.+++...+- . |. ..-++.+.+.|+++++|||+.
T Consensus 143 ~~~~~~~g~~lEiNt~~~----------~-p~-----~~~l~~~~~~G~~~~igSDAH 184 (215)
T PRK08392 143 LDLAEAYGKAFEISSRYR----------V-PD-----LEFIRECIKRGIKLTFASDAH 184 (215)
T ss_pred HHHHHHhCCEEEEeCCCC----------C-CC-----HHHHHHHHHcCCEEEEeCCCC
Confidence 566788999998875321 1 11 112566778899999999974
No 181
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=40.81 E-value=4.7e+02 Score=27.75 Aligned_cols=28 Identities=14% Similarity=0.275 Sum_probs=20.7
Q ss_pred CCHHHHHHHHHHHHH-CCCcEEEEecchH
Q 013175 232 MELESLLSMTMASDK-SGLQVAIHAIGDR 259 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~-~g~~v~iHa~gd~ 259 (448)
.++..+.++++..++ .++++++|+..+.
T Consensus 180 l~P~~v~~lv~alk~~~~ipi~~H~Hnt~ 208 (596)
T PRK14042 180 LTPTVTVELYAGLKQATGLPVHLHSHSTS 208 (596)
T ss_pred CCHHHHHHHHHHHHhhcCCEEEEEeCCCC
Confidence 457777777777664 4799999997654
No 182
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=40.49 E-value=71 Score=28.78 Aligned_cols=31 Identities=26% Similarity=0.264 Sum_probs=26.3
Q ss_pred cccCCCHHHHHHHHHHHHHCCCcEEEEecch
Q 013175 228 GLQVMELESLLSMTMASDKSGLQVAIHAIGD 258 (448)
Q Consensus 228 g~~~~~~~~l~~~~~~a~~~g~~v~iHa~gd 258 (448)
|-+.+..+.+.++++.+++.|+.++++.+|.
T Consensus 47 GEPllq~~fl~~l~~~~k~~gi~~~leTnG~ 77 (213)
T PRK10076 47 GEVLMQAEFATRFLQRLRLWGVSCAIETAGD 77 (213)
T ss_pred chHHcCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 4455667889999999999999999999884
No 183
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=39.57 E-value=2.4e+02 Score=25.35 Aligned_cols=76 Identities=18% Similarity=0.130 Sum_probs=55.8
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeecccc
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQH 311 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~ 311 (448)
.+.+....+++.+.+.|+++.==.... ...+++++++.+..+. +....+-=++..+.+++++..+.|..+.+.|.+
T Consensus 22 ~~~~~a~~~~~al~~~Gi~~iEit~~~---~~a~~~i~~l~~~~~~-~p~~~vGaGTV~~~~~~~~a~~aGA~FivsP~~ 97 (213)
T PRK06552 22 ESKEEALKISLAVIKGGIKAIEVTYTN---PFASEVIKELVELYKD-DPEVLIGAGTVLDAVTARLAILAGAQFIVSPSF 97 (213)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCC---ccHHHHHHHHHHHcCC-CCCeEEeeeeCCCHHHHHHHHHcCCCEEECCCC
Confidence 367889999999999999876433322 2355666666555431 113567777888999999999999999999987
No 184
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=39.54 E-value=49 Score=25.85 Aligned_cols=34 Identities=15% Similarity=0.378 Sum_probs=26.5
Q ss_pred hhhh--CCCCeEEEEeccCchhhhcHHHHHHcCCCC
Q 013175 39 IDDI--TPHNPVWLSRMDGHMGLANSVALQLVGITN 72 (448)
Q Consensus 39 LD~~--~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~~ 72 (448)
++.+ .+++||+++..+|..+..-...|+..|+++
T Consensus 58 ~~~l~~~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~ 93 (109)
T cd01533 58 VGELAPDPRTPIVVNCAGRTRSIIGAQSLINAGLPN 93 (109)
T ss_pred HHhcCCCCCCeEEEECCCCchHHHHHHHHHHCCCCc
Confidence 4455 346899999888888877778899999864
No 185
>TIGR01235 pyruv_carbox pyruvate carboxylase. This enzyme plays a role in gluconeogensis but not glycolysis.
Probab=38.57 E-value=6.8e+02 Score=29.00 Aligned_cols=37 Identities=14% Similarity=0.126 Sum_probs=24.1
Q ss_pred CCHHHHHHHHHHHHH-CCCcEEEEecchH--HHHHHHHHH
Q 013175 232 MELESLLSMTMASDK-SGLQVAIHAIGDR--ANDLVLDMY 268 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~-~g~~v~iHa~gd~--a~~~~l~a~ 268 (448)
.++..+.++++..++ .++++++|+..+. ++...+.++
T Consensus 715 l~P~~~~~Lv~~lk~~~~~pi~~H~Hdt~Gla~an~laA~ 754 (1143)
T TIGR01235 715 LKPAAAKLLIKALREKTDLPIHFHTHDTSGIAVASMLAAV 754 (1143)
T ss_pred cCHHHHHHHHHHHHHhcCCeEEEEECCCCCcHHHHHHHHH
Confidence 456677777777664 4899999997653 344444443
No 186
>PRK07945 hypothetical protein; Provisional
Probab=38.25 E-value=1.1e+02 Score=29.69 Aligned_cols=47 Identities=13% Similarity=0.164 Sum_probs=32.1
Q ss_pred hhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCC
Q 013175 292 SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP 352 (448)
Q Consensus 292 ~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p 352 (448)
.+.++.+++.|+.+++....+. ..+. ..-++...+.|+++++|||+.
T Consensus 248 ~~i~~a~~e~g~~lEINt~~~r---------~~P~-----~~il~~a~e~G~~vtigSDAH 294 (335)
T PRK07945 248 EAVFAACREHGTAVEINSRPER---------RDPP-----TRLLRLALDAGCLFSIDTDAH 294 (335)
T ss_pred HHHHHHHHHhCCEEEEeCCCCC---------CCCh-----HHHHHHHHHcCCeEEecCCCC
Confidence 3556778889999998764321 1111 123566778899999999974
No 187
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=37.82 E-value=1.1e+02 Score=27.27 Aligned_cols=72 Identities=11% Similarity=0.085 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeecccc
Q 013175 233 ELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQH 311 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~ 311 (448)
+.++..++++...+.|+++.==..... .++++++...+..+ ...+-=++..+.+++++..+.|..+.++|.+
T Consensus 18 ~~~~a~~~~~al~~gGi~~iEiT~~t~---~a~~~I~~l~~~~p----~~~vGAGTV~~~e~a~~a~~aGA~FivSP~~ 89 (196)
T PF01081_consen 18 DPEDAVPIAEALIEGGIRAIEITLRTP---NALEAIEALRKEFP----DLLVGAGTVLTAEQAEAAIAAGAQFIVSPGF 89 (196)
T ss_dssp SGGGHHHHHHHHHHTT--EEEEETTST---THHHHHHHHHHHHT----TSEEEEES--SHHHHHHHHHHT-SEEEESS-
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecCCc---cHHHHHHHHHHHCC----CCeeEEEeccCHHHHHHHHHcCCCEEECCCC
Confidence 456788899999999998753333221 34556665555544 4667777888999999999999999999986
No 188
>PRK09240 thiH thiamine biosynthesis protein ThiH; Reviewed
Probab=37.58 E-value=3.3e+02 Score=26.90 Aligned_cols=107 Identities=14% Similarity=0.096 Sum_probs=59.8
Q ss_pred cCCCHHHHHHHHHHHHHCCCcEEEEec-ch----HHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcE
Q 013175 230 QVMELESLLSMTMASDKSGLQVAIHAI-GD----RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIV 304 (448)
Q Consensus 230 ~~~~~~~l~~~~~~a~~~g~~v~iHa~-gd----~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~ 304 (448)
..++.+++.+.++.+.+.|+. .+|.. |. ..++..++.++.+....+ ..++ |+..++.+++.++++.|+.
T Consensus 102 ~~ls~eEI~~~a~~~~~~Gv~-~i~lvgGe~p~~~~~e~l~~~i~~Ik~~~p----~i~i-~~g~lt~e~l~~Lk~aGv~ 175 (371)
T PRK09240 102 KTLDEEEIEREMAAIKKLGFE-HILLLTGEHEAKVGVDYIRRALPIAREYFS----SVSI-EVQPLSEEEYAELVELGLD 175 (371)
T ss_pred ccCCHHHHHHHHHHHHhCCCC-EEEEeeCCCCCCCCHHHHHHHHHHHHHhCC----Ccee-ccCCCCHHHHHHHHHcCCC
Confidence 467899999999999998865 33332 32 234555666665544322 2233 4556789999999999975
Q ss_pred -EeeccccccCchhHHHHhc--CHh-hhhhhhhhHHHHHHcCCc
Q 013175 305 -ASMQPQHLLDDADSARKKL--GVD-RAERESYLFQSLLANNAL 344 (448)
Q Consensus 305 -~~~~P~~~~~~~~~~~~~~--g~~-r~~~~~~~~~~~~~~Gv~ 344 (448)
+++..... +.+.+.... |+. ..+.....++.+.++|+.
T Consensus 176 r~~i~lET~--~~~~~~~i~~~g~~h~~~~rl~~i~~a~~aG~~ 217 (371)
T PRK09240 176 GVTVYQETY--NPATYAKHHLRGPKRDFEYRLETPERAGRAGIR 217 (371)
T ss_pred EEEEEEecC--CHHHHHHhCcCCCCCCHHHHHHHHHHHHHcCCC
Confidence 22222111 122222211 211 111234457778888886
No 189
>PRK05434 phosphoglyceromutase; Provisional
Probab=37.15 E-value=94 Score=32.13 Aligned_cols=25 Identities=24% Similarity=0.502 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHCCC-cEEEEecch
Q 013175 234 LESLLSMTMASDKSGL-QVAIHAIGD 258 (448)
Q Consensus 234 ~~~l~~~~~~a~~~g~-~v~iHa~gd 258 (448)
.+.|..+++.|.+.|+ .|.+|+..|
T Consensus 127 ~~hl~~l~~~a~~~g~~~v~vH~~~D 152 (507)
T PRK05434 127 IDHLFALLELAKEEGVKKVYVHAFLD 152 (507)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEecC
Confidence 5789999999999998 999999865
No 190
>PRK08445 hypothetical protein; Provisional
Probab=35.91 E-value=1.7e+02 Score=28.65 Aligned_cols=114 Identities=8% Similarity=0.026 Sum_probs=60.3
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEecchH----HHHHHHHHHHHhHHhcCCCCCCCe---------EEecccCC-hhhHH
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAIGDR----ANDLVLDMYKSVVVTTGKRDQRFR---------IEHAQHLA-SGTAA 296 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~gd~----a~~~~l~a~~~~~~~~~~~~~r~~---------i~H~~~~~-~~~i~ 296 (448)
.++.+++.+.++.+.+.|.. .+|..|.. ..+...+.++.+.+..+. .+.+ +.+....+ +++++
T Consensus 72 ~l~~eeI~~~~~~a~~~g~~-~i~~~gg~~~~~~~e~~~~l~~~Ik~~~p~--i~~~a~s~~ei~~~a~~~~~~~~e~L~ 148 (348)
T PRK08445 72 ILSFEEIDKKIEELLAIGGT-QILFQGGVHPKLKIEWYENLVSHIAQKYPT--ITIHGFSAVEIDYIAKISKISIKEVLE 148 (348)
T ss_pred eCCHHHHHHHHHHHHHcCCC-EEEEecCCCCCCCHHHHHHHHHHHHHHCCC--cEEEEccHHHHHHHHHHhCCCHHHHHH
Confidence 56899999999999999875 66766532 233445555555554431 1111 11212233 78999
Q ss_pred HHHhCCcEEeeccccccCchhHHHHhcCHhh--hhhhhhhHHHHHHcCCceeec
Q 013175 297 RFGDQGIVASMQPQHLLDDADSARKKLGVDR--AERESYLFQSLLANNALLALG 348 (448)
Q Consensus 297 ~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r--~~~~~~~~~~~~~~Gv~v~~g 348 (448)
++++.|+.--..-..-..+... .+.+-++. ......-++.+.+.|+.++.+
T Consensus 149 ~LkeAGl~~~~g~glE~~~d~v-~~~~~pk~~t~~~~i~~i~~a~~~Gi~~~sg 201 (348)
T PRK08445 149 RLQAKGLSSIPGAGAEILSDRV-RDIIAPKKLDSDRWLEVHRQAHLIGMKSTAT 201 (348)
T ss_pred HHHHcCCCCCCCCceeeCCHHH-HHhhCCCCCCHHHHHHHHHHHHHcCCeeeeE
Confidence 9999987522111111111111 12221100 002345677888899876544
No 191
>PRK08508 biotin synthase; Provisional
Probab=35.74 E-value=3.8e+02 Score=25.20 Aligned_cols=69 Identities=13% Similarity=0.183 Sum_probs=43.3
Q ss_pred CCCHHHHHHHHHHHHHCCC-cEEEEec----chHHHHHHHHHHHHhHHhcCCCCCCCeEEec--ccCChhhHHHHHhCCc
Q 013175 231 VMELESLLSMTMASDKSGL-QVAIHAI----GDRANDLVLDMYKSVVVTTGKRDQRFRIEHA--QHLASGTAARFGDQGI 303 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~-~v~iHa~----gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~--~~~~~~~i~~~~~~gv 303 (448)
..+++++.+.++.+.+.|. .+++-.. .+...+..++.++.+.+..+ ...+ |+ ...++++++++++.|+
T Consensus 39 ~~s~eeI~~~a~~a~~~g~~~~~lv~sg~~~~~~~~e~~~ei~~~ik~~~p----~l~i-~~s~G~~~~e~l~~Lk~aGl 113 (279)
T PRK08508 39 RKDIEQIVQEAKMAKANGALGFCLVTSGRGLDDKKLEYVAEAAKAVKKEVP----GLHL-IACNGTASVEQLKELKKAGI 113 (279)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEeccCCCCcccHHHHHHHHHHHHhhCC----CcEE-EecCCCCCHHHHHHHHHcCC
Confidence 4688999998888888876 3333221 22345566666666554322 1222 32 3567899999999987
Q ss_pred E
Q 013175 304 V 304 (448)
Q Consensus 304 ~ 304 (448)
.
T Consensus 114 d 114 (279)
T PRK08508 114 F 114 (279)
T ss_pred C
Confidence 4
No 192
>TIGR03551 F420_cofH 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit. This enzyme, together with CofG, complete the biosynthesis of 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, the chromophore of coenzyme F420. The chromophore is also used in cyanobacteria DNA photolyases.
Probab=34.76 E-value=3e+02 Score=26.69 Aligned_cols=110 Identities=15% Similarity=0.156 Sum_probs=58.2
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEecch----HHHHHHHHHHHHhHHhcCCCCCCCeEEec-------------ccCChh
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAIGD----RANDLVLDMYKSVVVTTGKRDQRFRIEHA-------------QHLASG 293 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~gd----~a~~~~l~a~~~~~~~~~~~~~r~~i~H~-------------~~~~~~ 293 (448)
..+.+++.+.++.+.+.|.. .+|..+. ...+..++.++.+.+..+ ..+ .|+ ...+++
T Consensus 69 ~ls~eeI~e~~~~~~~~G~~-~i~l~gG~~p~~~~~~~~~i~~~Ik~~~~----~i~-~~~~t~~ei~~~~~~~g~~~~e 142 (343)
T TIGR03551 69 LLSLEEIAERAAEAWKAGAT-EVCIQGGIHPDLDGDFYLDILRAVKEEVP----GMH-IHAFSPMEVYYGARNSGLSVEE 142 (343)
T ss_pred cCCHHHHHHHHHHHHHCCCC-EEEEEeCCCCCCCHHHHHHHHHHHHHHCC----Cce-EEecCHHHHHHHHHHcCCCHHH
Confidence 36899999999999998855 3444322 123445555555544322 112 222 244678
Q ss_pred hHHHHHhCCcEEeeccccccCchhHHHHhcCHh--hhhhhhhhHHHHHHcCCceee
Q 013175 294 TAARFGDQGIVASMQPQHLLDDADSARKKLGVD--RAERESYLFQSLLANNALLAL 347 (448)
Q Consensus 294 ~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~--r~~~~~~~~~~~~~~Gv~v~~ 347 (448)
.++++++.|+.....-..-.++.+. .+.+.+. ..+.....++.+.+.|+.++.
T Consensus 143 ~l~~LkeAGl~~i~~~~~E~~~~~v-~~~i~~~~~~~~~~~~~i~~a~~~Gi~v~s 197 (343)
T TIGR03551 143 ALKRLKEAGLDSMPGTAAEILDDEV-RKVICPDKLSTAEWIEIIKTAHKLGIPTTA 197 (343)
T ss_pred HHHHHHHhCcccccCcchhhcCHHH-HHhcCCCCCCHHHHHHHHHHHHHcCCcccc
Confidence 9999999997643211111111111 1122211 111224467778888887643
No 193
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=34.00 E-value=3.2e+02 Score=24.56 Aligned_cols=73 Identities=16% Similarity=0.095 Sum_probs=53.6
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEe-cchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccc
Q 013175 232 MELESLLSMTMASDKSGLQVAIHA-IGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQ 310 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa-~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~ 310 (448)
.+.++..++++.+.+.|+.+.==. ..+ ..+++++++.+..+ ...|-=.+..++++.++..+.|..+.+.|.
T Consensus 24 ~~~~~a~~i~~al~~~Gi~~iEitl~~~----~~~~~I~~l~~~~p----~~~IGAGTVl~~~~a~~a~~aGA~FivsP~ 95 (212)
T PRK05718 24 NKLEDAVPLAKALVAGGLPVLEVTLRTP----AALEAIRLIAKEVP----EALIGAGTVLNPEQLAQAIEAGAQFIVSPG 95 (212)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCc----cHHHHHHHHHHHCC----CCEEEEeeccCHHHHHHHHHcCCCEEECCC
Confidence 367888899999999998865222 222 34566666655544 356666678889999999999999999998
Q ss_pred cc
Q 013175 311 HL 312 (448)
Q Consensus 311 ~~ 312 (448)
+.
T Consensus 96 ~~ 97 (212)
T PRK05718 96 LT 97 (212)
T ss_pred CC
Confidence 73
No 194
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=33.96 E-value=66 Score=30.44 Aligned_cols=32 Identities=25% Similarity=0.181 Sum_probs=30.0
Q ss_pred hCCCCeEEEEeccCchhhhcHHHHHHcCCCCC
Q 013175 42 ITPHNPVWLSRMDGHMGLANSVALQLVGITNL 73 (448)
Q Consensus 42 ~~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~~~ 73 (448)
+.++.||+++..+|+.+-.+-.||+.+|....
T Consensus 231 i~~~~~vI~yCgsG~~As~~~~al~~lg~~~~ 262 (285)
T COG2897 231 IDPDKEVIVYCGSGVRASVTWLALAELGGPNN 262 (285)
T ss_pred CCCCCCEEEEcCCchHHHHHHHHHHHhCCCCc
Confidence 77999999999999999999999999998765
No 195
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=33.60 E-value=50 Score=25.22 Aligned_cols=33 Identities=12% Similarity=0.026 Sum_probs=27.1
Q ss_pred hhhhCCCCeEEEEeccCchhhhcHHHHHHcCCC
Q 013175 39 IDDITPHNPVWLSRMDGHMGLANSVALQLVGIT 71 (448)
Q Consensus 39 LD~~~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~ 71 (448)
+..+.+++||+++-.+|..+..=...|+..|++
T Consensus 55 ~~~~~~~~~ivv~C~~G~rs~~aa~~L~~~G~~ 87 (100)
T cd01523 55 LDQLPDDQEVTVICAKEGSSQFVAELLAERGYD 87 (100)
T ss_pred HhhCCCCCeEEEEcCCCCcHHHHHHHHHHcCce
Confidence 455668899999988888887777888889986
No 196
>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily. This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.
Probab=33.52 E-value=45 Score=26.75 Aligned_cols=32 Identities=13% Similarity=0.290 Sum_probs=25.0
Q ss_pred CCCCeEEEEeccCchhhhcHHHHHHcCCCCCC
Q 013175 43 TPHNPVWLSRMDGHMGLANSVALQLVGITNLS 74 (448)
Q Consensus 43 ~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~~~~ 74 (448)
.+++||+++..+|..+..=..+|+..|++.+.
T Consensus 70 ~~~~~ivv~C~~G~rs~~aa~~L~~~G~~~~v 101 (122)
T cd01526 70 DKDSPIYVVCRRGNDSQTAVRKLKELGLERFV 101 (122)
T ss_pred CCCCcEEEECCCCCcHHHHHHHHHHcCCccce
Confidence 67899999998888776566678889994333
No 197
>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B ....
Probab=32.59 E-value=35 Score=24.19 Aligned_cols=12 Identities=58% Similarity=0.681 Sum_probs=9.1
Q ss_pred HHHHHhcCccee
Q 013175 122 SNLALSRGVTTV 133 (448)
Q Consensus 122 ~~~~~~~GvTtv 133 (448)
..+++++|||||
T Consensus 57 ~~~~l~~GvTTV 68 (68)
T PF13594_consen 57 AAAALAGGVTTV 68 (68)
T ss_dssp HHHHHHTTEEEE
T ss_pred HHHHHCcceeeC
Confidence 345569999997
No 198
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=31.62 E-value=3.8e+02 Score=23.94 Aligned_cols=74 Identities=18% Similarity=0.191 Sum_probs=53.1
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeecccc
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQH 311 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~ 311 (448)
.+.+.+.++++.+.+.|+.+.==..... ..++.++++.+.++. +..|-=++.++.++++...+.|....+.|+.
T Consensus 19 ~~~~~~~~~~~a~~~gGi~~iEvt~~~~---~~~~~i~~l~~~~~~---~~~iGaGTV~~~~~~~~a~~aGA~fivsp~~ 92 (206)
T PRK09140 19 ITPDEALAHVGALIEAGFRAIEIPLNSP---DPFDSIAALVKALGD---RALIGAGTVLSPEQVDRLADAGGRLIVTPNT 92 (206)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCc---cHHHHHHHHHHHcCC---CcEEeEEecCCHHHHHHHHHcCCCEEECCCC
Confidence 3678899999999999988653322222 233455555554441 3566666788999999999999999999986
No 199
>PLN02460 indole-3-glycerol-phosphate synthase
Probab=30.96 E-value=3.3e+02 Score=26.48 Aligned_cols=36 Identities=22% Similarity=0.218 Sum_probs=29.2
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHH
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLD 266 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~ 266 (448)
.++++.|+++++.|++.|+.+.+-+.....++.+++
T Consensus 213 iL~~~~L~~l~~~A~~LGme~LVEVH~~~ElerAl~ 248 (338)
T PLN02460 213 VLPDLDIKYMLKICKSLGMAALIEVHDEREMDRVLG 248 (338)
T ss_pred hCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHh
Confidence 457889999999999999999887777666665554
No 200
>TIGR01307 pgm_bpd_ind 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. This protein is about double in length of, and devoid of homology to the form of phosphoglycerate mutase that uses 2,3-bisphosphoglycerate as a cofactor.
Probab=30.78 E-value=1.4e+02 Score=30.70 Aligned_cols=25 Identities=24% Similarity=0.590 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHCCC-cEEEEecch
Q 013175 234 LESLLSMTMASDKSGL-QVAIHAIGD 258 (448)
Q Consensus 234 ~~~l~~~~~~a~~~g~-~v~iHa~gd 258 (448)
.+.|..+++.|.+.|+ .|.+|+..|
T Consensus 123 ~~hl~~l~~~a~~~g~~~v~vH~~~D 148 (501)
T TIGR01307 123 IDHLIALIELAAERGIEKVVLHAFTD 148 (501)
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEecC
Confidence 5789999999999999 799999865
No 201
>PRK05927 hypothetical protein; Provisional
Probab=29.80 E-value=2.2e+02 Score=27.85 Aligned_cols=72 Identities=14% Similarity=0.176 Sum_probs=43.0
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEec-ch---HHHHHHHHHHHHhHHhcCCCCC----CCeEEe----cccCChhhHHHH
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAI-GD---RANDLVLDMYKSVVVTTGKRDQ----RFRIEH----AQHLASGTAARF 298 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~-gd---~a~~~~l~a~~~~~~~~~~~~~----r~~i~H----~~~~~~~~i~~~ 298 (448)
.++.+++.+.++.+.+.|..- +|.. |. ..++...+.++.+.+..+.... ...|.| ....+.++++++
T Consensus 75 ~ls~eei~~~a~~~~~~G~~~-i~i~gG~~p~~~~e~~~~~i~~ik~~~p~l~~~~~s~~ei~~~~~~~G~~~~e~l~~L 153 (350)
T PRK05927 75 LLSFDEFRSLMQRYVSAGVKT-VLLQGGVHPQLGIDYLEELVRITVKEFPSLHPHFFSAVEIAHAAQVSGISTEQALERL 153 (350)
T ss_pred ccCHHHHHHHHHHHHHCCCCE-EEEeCCCCCCCCHHHHHHHHHHHHHHCCCCcccCCCHHHHHHHHHhcCCCHHHHHHHH
Confidence 578899999999999998743 3333 22 2245555666655544331000 011111 235567899999
Q ss_pred HhCCc
Q 013175 299 GDQGI 303 (448)
Q Consensus 299 ~~~gv 303 (448)
++.|+
T Consensus 154 k~aGl 158 (350)
T PRK05927 154 WDAGQ 158 (350)
T ss_pred HHcCc
Confidence 99988
No 202
>cd07937 DRE_TIM_PC_TC_5S Pyruvate carboxylase and Transcarboxylase 5S, carboxyltransferase domain. This family includes the carboxyltransferase domains of pyruvate carboxylase (PC) and the transcarboxylase (TC) 5S subunit. Transcarboxylase 5S is a cobalt-dependent metalloenzyme subunit of the biotin-dependent transcarboxylase multienzyme complex. Transcarboxylase 5S transfers carbon dioxide from the 1.3S biotin to pyruvate in the second of two carboxylation reactions catalyzed by TC. The first reaction involves the transfer of carbon dioxide from methylmalonyl-CoA to the 1.3S biotin, and is catalyzed by the 12S subunit. These two steps allow a carboxylate group to be transferred from oxaloacetate to propionyl-CoA to yield pyruvate and methylmalonyl-CoA. The catalytic domain of transcarboxylase 5S has a canonical TIM-barrel fold with a large C-terminal extension that forms a funnel leading to the active site. Transcarboxylase 5S forms a homodimer and there are six dimers per complex
Probab=29.74 E-value=4.7e+02 Score=24.47 Aligned_cols=38 Identities=18% Similarity=0.191 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHHHHH-CCCcEEEEecchH--HHHHHHHHHH
Q 013175 232 MELESLLSMTMASDK-SGLQVAIHAIGDR--ANDLVLDMYK 269 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~-~g~~v~iHa~gd~--a~~~~l~a~~ 269 (448)
.+++++.++++..++ .+.++.+|+..+. ++...+.+++
T Consensus 175 ~~P~~v~~lv~~l~~~~~~~l~~H~Hnd~GlA~aN~laA~~ 215 (275)
T cd07937 175 LTPYAAYELVKALKKEVGLPIHLHTHDTSGLAVATYLAAAE 215 (275)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEEecCCCChHHHHHHHHHH
Confidence 467788888887765 3688888887664 4444555543
No 203
>PRK07094 biotin synthase; Provisional
Probab=29.67 E-value=5e+02 Score=24.77 Aligned_cols=107 Identities=12% Similarity=0.124 Sum_probs=55.2
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecch-H--HHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEee-
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGD-R--ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASM- 307 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd-~--a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~- 307 (448)
++.+++.+.++.+.+.|+.-..=..|+ . ..+...+.++.+.+.. +...+ .+....+++.++++++.|+....
T Consensus 70 ls~eei~~~~~~~~~~g~~~i~l~gG~~~~~~~~~l~~l~~~i~~~~---~l~i~-~~~g~~~~e~l~~Lk~aG~~~v~~ 145 (323)
T PRK07094 70 LSPEEILECAKKAYELGYRTIVLQSGEDPYYTDEKIADIIKEIKKEL---DVAIT-LSLGERSYEEYKAWKEAGADRYLL 145 (323)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCCCHHHHHHHHHHHHccC---CceEE-EecCCCCHHHHHHHHHcCCCEEEe
Confidence 478888888888888887543222232 1 1234444444443321 22222 24445678999999999975332
Q ss_pred ccccccCchhHHHHhcCHh-hhhhhhhhHHHHHHcCCce
Q 013175 308 QPQHLLDDADSARKKLGVD-RAERESYLFQSLLANNALL 345 (448)
Q Consensus 308 ~P~~~~~~~~~~~~~~g~~-r~~~~~~~~~~~~~~Gv~v 345 (448)
-... .+...+. .+++. ..+.....++.+.+.|+.+
T Consensus 146 glEs--~~~~~~~-~i~~~~s~~~~~~~i~~l~~~Gi~v 181 (323)
T PRK07094 146 RHET--ADKELYA-KLHPGMSFENRIACLKDLKELGYEV 181 (323)
T ss_pred cccc--CCHHHHH-HhCCCCCHHHHHHHHHHHHHcCCee
Confidence 1111 1122221 22211 1113344577788888754
No 204
>PRK13802 bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta; Provisional
Probab=29.29 E-value=6e+02 Score=27.54 Aligned_cols=105 Identities=10% Similarity=0.148 Sum_probs=65.1
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHHH---------------------HHHhHHhcCCCCCCCeEEecccC
Q 013175 232 MELESLLSMTMASDKSGLQVAIHAIGDRANDLVLDM---------------------YKSVVVTTGKRDQRFRIEHAQHL 290 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a---------------------~~~~~~~~~~~~~r~~i~H~~~~ 290 (448)
+++++|+++++.|++.|+.+.+-+.....++.++++ .+++....+ .....|.=....
T Consensus 144 L~~~~l~~l~~~a~~lGme~LvEvh~~~el~~a~~~ga~iiGINnRdL~tf~vd~~~t~~L~~~ip--~~~~~VsESGI~ 221 (695)
T PRK13802 144 LDDAQLKHLLDLAHELGMTVLVETHTREEIERAIAAGAKVIGINARNLKDLKVDVNKYNELAADLP--DDVIKVAESGVF 221 (695)
T ss_pred cCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhCCCCEEEEeCCCCccceeCHHHHHHHHhhCC--CCcEEEEcCCCC
Confidence 467899999999999999998777766655555442 222222222 223445555566
Q ss_pred ChhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCC
Q 013175 291 ASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDW 351 (448)
Q Consensus 291 ~~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~ 351 (448)
+++++.++++.|+...+--..+....+ + ...++++..+|-.+--+-|-
T Consensus 222 ~~~d~~~l~~~G~davLIGeslm~~~d-------p------~~~~~~l~~~~~~~~~~~~~ 269 (695)
T PRK13802 222 GAVEVEDYARAGADAVLVGEGVATADD-------H------ELAVERLVKAGARVKASETT 269 (695)
T ss_pred CHHHHHHHHHCCCCEEEECHHhhCCCC-------H------HHHHHHHHhccccccccCCC
Confidence 789999999998777655444332111 1 12356677777666555443
No 205
>TIGR01856 hisJ_fam histidinol phosphate phosphatase HisJ family. This model represents the histidinol phosphate phosphatase HisJ of Bacillus subtilis, and related proteins from a number of species within a larger family of phosphatases in the PHP hydrolase family. HisJ catalyzes the penultimate step of histidine biosynthesis but shows no homology to the functionally equivalent sequence in E. coli, a domain of the bifunctional HisB protein. Note, however, that many species have two members and that Clostridium perfringens, predicted not to make histidine, has five members of this family; this family is designated subfamily rather than equivalog to indicate that members may not all act as HisJ.
Probab=29.19 E-value=54 Score=30.34 Aligned_cols=51 Identities=20% Similarity=0.084 Sum_probs=31.5
Q ss_pred hhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCC
Q 013175 293 GTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP 352 (448)
Q Consensus 293 ~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p 352 (448)
+.++.+++.|+.+++....+... ++. .. ....-++...+.|+++++|||+.
T Consensus 189 ~il~~~~~~g~~lEiNt~g~r~~-------~~~-~y-P~~~il~~~~~~g~~itlgSDAH 239 (253)
T TIGR01856 189 RILKLVASQGKALEFNTSGLRKP-------LEE-AY-PSKELLNLAKELGIPLVLGSDAH 239 (253)
T ss_pred HHHHHHHHcCCEEEEEcHhhcCC-------CCC-CC-CCHHHHHHHHHcCCCEEecCCCC
Confidence 45677888999999876532210 110 00 01123566777899999999974
No 206
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=28.76 E-value=5.2e+02 Score=25.38 Aligned_cols=112 Identities=14% Similarity=0.128 Sum_probs=59.2
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEec-chHHH-HHHHHHHHHhHHhcCCCCCCC-eEEecccCChhhHHHHHhCCcE-Ee
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAI-GDRAN-DLVLDMYKSVVVTTGKRDQRF-RIEHAQHLASGTAARFGDQGIV-AS 306 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~-gd~a~-~~~l~a~~~~~~~~~~~~~r~-~i~H~~~~~~~~i~~~~~~gv~-~~ 306 (448)
.++.+++.++++.+.+.|.. .++.. |+.-+ ....+.++.+.. .+. .. .+.-+..++++.++++++.|+. +.
T Consensus 45 ~~~~e~~~~ii~~~~~~g~~-~v~~~GGEPll~~~~~~il~~~~~-~g~---~~~i~TNG~ll~~~~~~~L~~~g~~~v~ 119 (378)
T PRK05301 45 ELSTEEWIRVLREARALGAL-QLHFSGGEPLLRKDLEELVAHARE-LGL---YTNLITSGVGLTEARLAALKDAGLDHIQ 119 (378)
T ss_pred CCCHHHHHHHHHHHHHcCCc-EEEEECCccCCchhHHHHHHHHHH-cCC---cEEEECCCccCCHHHHHHHHHcCCCEEE
Confidence 57888999999999988853 33443 33321 223333433322 221 22 2334456788889999988753 33
Q ss_pred eccccccCchhHHHHhcCHh-hhhhhhhhHHHHHHcCCceeecC
Q 013175 307 MQPQHLLDDADSARKKLGVD-RAERESYLFQSLLANNALLALGS 349 (448)
Q Consensus 307 ~~P~~~~~~~~~~~~~~g~~-r~~~~~~~~~~~~~~Gv~v~~gS 349 (448)
+.-... +.+.+....|.. -.++....++.+.+.|+.+.+.+
T Consensus 120 iSldg~--~~e~~d~irg~~g~f~~~~~~i~~l~~~g~~v~i~~ 161 (378)
T PRK05301 120 LSFQDS--DPELNDRLAGTKGAFAKKLAVARLVKAHGYPLTLNA 161 (378)
T ss_pred EEecCC--CHHHHHHHcCCCchHHHHHHHHHHHHHCCCceEEEE
Confidence 322211 122222211211 11133456777888898877654
No 207
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=28.53 E-value=74 Score=30.67 Aligned_cols=40 Identities=23% Similarity=0.218 Sum_probs=31.7
Q ss_pred CCChhhhhh------hCCCCeEEEEeccCchhhhcHHHHHHcCCCC
Q 013175 33 LPMASWIDD------ITPHNPVWLSRMDGHMGLANSVALQLVGITN 72 (448)
Q Consensus 33 ~p~~~~LD~------~~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~~ 72 (448)
+++.++|.+ +.+++||+++..+|+.+-..-.+|+.+|.++
T Consensus 251 ~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~ 296 (320)
T PLN02723 251 LLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTD 296 (320)
T ss_pred CCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCC
Confidence 444555543 5679999999999999999999999999863
No 208
>COG0696 GpmI Phosphoglyceromutase [Carbohydrate transport and metabolism]
Probab=28.47 E-value=1.7e+02 Score=29.74 Aligned_cols=25 Identities=32% Similarity=0.573 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHCCC-cEEEEecch
Q 013175 234 LESLLSMTMASDKSGL-QVAIHAIGD 258 (448)
Q Consensus 234 ~~~l~~~~~~a~~~g~-~v~iHa~gd 258 (448)
.+.|.++++.|.++|+ .|.+|+..|
T Consensus 126 ~~Hl~ali~~a~k~g~~kV~~H~f~D 151 (509)
T COG0696 126 IDHLLALIELAAKNGMKKVYLHAFLD 151 (509)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEEecC
Confidence 5789999999999996 999999865
No 209
>PRK07329 hypothetical protein; Provisional
Probab=28.41 E-value=80 Score=29.08 Aligned_cols=50 Identities=12% Similarity=0.069 Sum_probs=33.2
Q ss_pred hhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCc-eeecCCCC
Q 013175 293 GTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNAL-LALGSDWP 352 (448)
Q Consensus 293 ~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~-v~~gSD~p 352 (448)
+.++.+++.|+.+++....+... .+.. ....+++...+.|++ +++|||+.
T Consensus 169 ~i~~~~~~~~~~lEiNt~~~~~~-------~~~~---~~~~~l~~~~~~g~~~i~~gSDAH 219 (246)
T PRK07329 169 RIFAKMIDNDLAFELNTKSMYLY-------GNEG---LYRYAIELYKQLGGKLFSIGSDAH 219 (246)
T ss_pred HHHHHHHHcCCeEEEECcccccC-------CCCc---chHHHHHHHHHcCCeEEEecCCCC
Confidence 44577888999999887643210 1111 113357888899975 99999974
No 210
>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.
Probab=28.29 E-value=56 Score=24.86 Aligned_cols=30 Identities=13% Similarity=0.130 Sum_probs=25.9
Q ss_pred hCCCCeEEEEeccCchhhhcHHHHHHcCCC
Q 013175 42 ITPHNPVWLSRMDGHMGLANSVALQLVGIT 71 (448)
Q Consensus 42 ~~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~ 71 (448)
..+++||+++..+|..+......|+..|++
T Consensus 51 ~~~~~~iv~~c~~g~~s~~~~~~L~~~g~~ 80 (99)
T cd01527 51 LVGANAIIFHCRSGMRTQQNAERLAAISAG 80 (99)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHcCCc
Confidence 456899999999999888888899988886
No 211
>PRK02308 uvsE putative UV damage endonuclease; Provisional
Probab=28.17 E-value=2.9e+02 Score=26.39 Aligned_cols=26 Identities=12% Similarity=0.046 Sum_probs=22.2
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEec
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAI 256 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~ 256 (448)
....+.++++-+.+.++|+++.+|+.
T Consensus 87 ~~~~~~~~~~g~~~~~~~irls~Hp~ 112 (303)
T PRK02308 87 EPFKEELREIGEFIKEHNIRLSFHPD 112 (303)
T ss_pred CCCHHHHHHHHHHHHHcCCCeeccCh
Confidence 45678899999999999999999974
No 212
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
Probab=27.69 E-value=3.8e+02 Score=24.08 Aligned_cols=71 Identities=14% Similarity=0.090 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEe-cchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeecccc
Q 013175 233 ELESLLSMTMASDKSGLQVAIHA-IGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQH 311 (448)
Q Consensus 233 ~~~~l~~~~~~a~~~g~~v~iHa-~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~ 311 (448)
+.++-..+.+..-+.|++..==. ..+ ..+++++.+.+..+ +..|--.+.+++++++.+.+.|..+.+.|..
T Consensus 23 ~~e~a~~~a~Ali~gGi~~IEITl~sp----~a~e~I~~l~~~~p----~~lIGAGTVL~~~q~~~a~~aGa~fiVsP~~ 94 (211)
T COG0800 23 DVEEALPLAKALIEGGIPAIEITLRTP----AALEAIRALAKEFP----EALIGAGTVLNPEQARQAIAAGAQFIVSPGL 94 (211)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEecCCC----CHHHHHHHHHHhCc----ccEEccccccCHHHHHHHHHcCCCEEECCCC
Confidence 56777888888889999866333 333 23455655555544 5677777899999999999999999999987
No 213
>PRK14041 oxaloacetate decarboxylase; Provisional
Probab=27.65 E-value=6.8e+02 Score=25.64 Aligned_cols=38 Identities=18% Similarity=0.182 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHHHHH-CCCcEEEEecchH--HHHHHHHHHH
Q 013175 232 MELESLLSMTMASDK-SGLQVAIHAIGDR--ANDLVLDMYK 269 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~-~g~~v~iHa~gd~--a~~~~l~a~~ 269 (448)
.++..+.++++..++ .++++++|+..+. ++...+.+++
T Consensus 179 l~P~~v~~Lv~~lk~~~~vpI~~H~Hnt~GlA~AN~laAie 219 (467)
T PRK14041 179 LTPKRAYELVKALKKKFGVPVEVHSHCTTGLASLAYLAAVE 219 (467)
T ss_pred cCHHHHHHHHHHHHHhcCCceEEEecCCCCcHHHHHHHHHH
Confidence 457777888777664 4789999997664 4444555543
No 214
>PF07287 DUF1446: Protein of unknown function (DUF1446); InterPro: IPR010839 This family consists of several bacterial and plant proteins of around 400 residues in length. The function of this family is unknown.
Probab=26.84 E-value=3.1e+02 Score=27.04 Aligned_cols=104 Identities=16% Similarity=0.134 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeeccc--cc
Q 013175 235 ESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQ--HL 312 (448)
Q Consensus 235 ~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~--~~ 312 (448)
+.|+.++..+.++|++|.+-+-+-.. ..+.+.++++.++.|.. .+.-..|.....+. +.+..+.|..+...+. .+
T Consensus 58 ~~L~~~L~~~~~~gIkvI~NaGg~np-~~~a~~v~eia~e~Gl~-lkvA~V~gDd~~~~-v~~~~~~g~~~~~l~~~~~l 134 (362)
T PF07287_consen 58 RDLRPLLPAAAEKGIKVITNAGGLNP-AGCADIVREIARELGLS-LKVAVVYGDDLKDE-VKELLAEGETIRPLDTGPPL 134 (362)
T ss_pred HHHHHHHHHHHhCCCCEEEeCCCCCH-HHHHHHHHHHHHhcCCC-eeEEEEECccchHh-HHHHHhCCCCCccCCCCCCc
Confidence 47899999999999999988754322 33566677777776754 55555565544433 3333334432221111 11
Q ss_pred cCchh---HHHHhcCHhhhhhhhhhHHHHHHcCCceeec
Q 013175 313 LDDAD---SARKKLGVDRAERESYLFQSLLANNALLALG 348 (448)
Q Consensus 313 ~~~~~---~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~g 348 (448)
..... .....+ +..|+.+.+++|.-+.+.
T Consensus 135 ~~~~~~~~~a~ayl-------Ga~pI~~AL~~GADIVI~ 166 (362)
T PF07287_consen 135 SEWDDRIVSANAYL-------GAEPIVEALEAGADIVIT 166 (362)
T ss_pred chhccccceEEEec-------ChHHHHHHHHcCCCEEEe
Confidence 00000 001123 356899999999988886
No 215
>TIGR02351 thiH thiazole biosynthesis protein ThiH. Members this protein family are the ThiH protein of thiamine biosynthesis, a homolog of the BioB protein of biotin biosynthesis. Genes for the this protein generally are found in operons with other thiamin biosynthesis genes.
Probab=26.83 E-value=2.1e+02 Score=28.23 Aligned_cols=69 Identities=19% Similarity=0.234 Sum_probs=45.0
Q ss_pred cCCCHHHHHHHHHHHHHCCCcEEEEec-ch----HHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcE
Q 013175 230 QVMELESLLSMTMASDKSGLQVAIHAI-GD----RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIV 304 (448)
Q Consensus 230 ~~~~~~~l~~~~~~a~~~g~~v~iHa~-gd----~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~ 304 (448)
..++.+++.+.++.+.+.|+. .+|.. |. ..++..++.++.+.+..+ ..+++ +..++.++++++++.|+.
T Consensus 101 ~~Ls~eEI~~~a~~~~~~Gv~-~i~lvgGe~p~~~~~e~l~eii~~Ik~~~p----~i~Ie-i~~lt~e~~~~Lk~aGv~ 174 (366)
T TIGR02351 101 KKLNEEEIEREIEAIKKSGFK-EILLVTGESEKAAGVEYIAEAIKLAREYFS----SLAIE-VQPLNEEEYKKLVEAGLD 174 (366)
T ss_pred CcCCHHHHHHHHHHHHhCCCC-EEEEeeCCCCCCCCHHHHHHHHHHHHHhCC----ccccc-cccCCHHHHHHHHHcCCC
Confidence 456899999999999999854 44433 32 124456666666554432 22332 335789999999999974
No 216
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=26.49 E-value=3.5e+02 Score=26.66 Aligned_cols=96 Identities=16% Similarity=0.056 Sum_probs=54.2
Q ss_pred cCCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHH--------HHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhC
Q 013175 230 QVMELESLLSMTMASDKSGLQVAIHAIGDRANDLV--------LDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQ 301 (448)
Q Consensus 230 ~~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~--------l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~ 301 (448)
+..+.+.+.+.+.. +.| .+|++....+... .+.++.+.......+.+ ...|.. -+.+.+.++++.
T Consensus 170 ~~~~~~~~~~~~~~--~~g---~~~~e~~~~~~~~~~~~~~~~~e~i~~~v~~A~~~G~~-v~sH~~-~~~e~i~~a~~~ 242 (376)
T TIGR02318 170 QFRDLEKYREYYRG--KRG---LSDDEFDEIVEERIARRAEYGLANRSEIAALARARGIP-LASHDD-DTPEHVAEAHDL 242 (376)
T ss_pred cccCHHHHHHHHHh--hcC---CCHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHCCCe-EEEecC-CCHHHHHHHHHC
Confidence 35667777777654 566 6788765433321 12222222221122333 366653 245678888888
Q ss_pred CcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCC
Q 013175 302 GIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP 352 (448)
Q Consensus 302 gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p 352 (448)
|+.++-+|.. ......+.++|+.+..++..+
T Consensus 243 Gv~~~E~~~t--------------------~e~a~~~~~~G~~v~~~~p~~ 273 (376)
T TIGR02318 243 GVTISEFPTT--------------------LEAAKEARSLGMQILMGAPNI 273 (376)
T ss_pred CCChhccCCC--------------------HHHHHHHHHcCCeEEECCccc
Confidence 9877665533 112456778899988886544
No 217
>PRK14040 oxaloacetate decarboxylase; Provisional
Probab=26.21 E-value=8.1e+02 Score=26.02 Aligned_cols=28 Identities=7% Similarity=0.132 Sum_probs=20.6
Q ss_pred CCHHHHHHHHHHHHH-CCCcEEEEecchH
Q 013175 232 MELESLLSMTMASDK-SGLQVAIHAIGDR 259 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~-~g~~v~iHa~gd~ 259 (448)
..+..+.++++..++ .++++++|+..+.
T Consensus 181 l~P~~~~~lv~~lk~~~~~pi~~H~Hnt~ 209 (593)
T PRK14040 181 LKPYAAYELVSRIKKRVDVPLHLHCHATT 209 (593)
T ss_pred cCHHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence 457777777777664 4789999997664
No 218
>PRK08609 hypothetical protein; Provisional
Probab=26.07 E-value=2.2e+02 Score=29.98 Aligned_cols=59 Identities=10% Similarity=0.039 Sum_probs=37.9
Q ss_pred CCCeEEeccc--C---C------hhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeec
Q 013175 280 QRFRIEHAQH--L---A------SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALG 348 (448)
Q Consensus 280 ~r~~i~H~~~--~---~------~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~g 348 (448)
....|.|... + . ++.++.+++.|+.+++....+. .++ ...-++.+.+.|+++++|
T Consensus 459 ~~dILaHpd~rli~~~~~~~~d~~~i~~~a~~~G~~lEINa~~~r---------~~~-----~~~~~~~~~e~Gv~i~ig 524 (570)
T PRK08609 459 YVRLIAHPTGRLIGRRDGYDVNIDQLIELAKETNTALELNANPNR---------LDL-----SAEHLKKAQEAGVKLAIN 524 (570)
T ss_pred CceEEECCCccccccCCCchHHHHHHHHHHHHhCCEEEEcCCccc---------cCc-----cHHHHHHHHHcCCEEEEE
Confidence 3567788761 1 1 2233455778999988765432 111 122467788999999999
Q ss_pred CCCC
Q 013175 349 SDWP 352 (448)
Q Consensus 349 SD~p 352 (448)
||+.
T Consensus 525 SDAH 528 (570)
T PRK08609 525 TDAH 528 (570)
T ss_pred CCCC
Confidence 9974
No 219
>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1. This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.
Probab=25.84 E-value=89 Score=24.85 Aligned_cols=49 Identities=24% Similarity=0.262 Sum_probs=33.3
Q ss_pred CCCCeEEEEeccCchhhhcHHHHHHcCCCCCCCCCCCC-eEeeCCCCCCCc
Q 013175 43 TPHNPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGG-TIMKTSSGEPTG 92 (448)
Q Consensus 43 ~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~~~~~~~~gg-~i~~d~~G~~tG 92 (448)
.+++||+++..+|+.+..=..+|+.+|+++- ....|| .=.+|..|.-.|
T Consensus 62 ~~~~~ivv~C~~G~rs~~aa~~L~~~G~~~v-~~l~gG~~~~~~~~~~~~~ 111 (117)
T cd01522 62 GKDRPVLLLCRSGNRSIAAAEAAAQAGFTNV-YNVLEGFEGDLDAAGHRGG 111 (117)
T ss_pred CCCCeEEEEcCCCccHHHHHHHHHHCCCCeE-EECcCceecCCCCCCcccc
Confidence 5889999999999888777888999998642 223444 233444454443
No 220
>PRK09282 pyruvate carboxylase subunit B; Validated
Probab=25.79 E-value=8.2e+02 Score=25.96 Aligned_cols=37 Identities=16% Similarity=0.107 Sum_probs=24.6
Q ss_pred CCHHHHHHHHHHHHH-CCCcEEEEecchH--HHHHHHHHH
Q 013175 232 MELESLLSMTMASDK-SGLQVAIHAIGDR--ANDLVLDMY 268 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~-~g~~v~iHa~gd~--a~~~~l~a~ 268 (448)
..+..+.++++..++ .++++++|+..+. ++...+.++
T Consensus 180 ~~P~~~~~lv~~lk~~~~~pi~~H~Hnt~Gla~An~laAv 219 (592)
T PRK09282 180 LTPYAAYELVKALKEEVDLPVQLHSHCTSGLAPMTYLKAV 219 (592)
T ss_pred cCHHHHHHHHHHHHHhCCCeEEEEEcCCCCcHHHHHHHHH
Confidence 457778888877765 4788999987653 344444444
No 221
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit. This model describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea. The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.
Probab=24.89 E-value=8.5e+02 Score=25.80 Aligned_cols=28 Identities=21% Similarity=0.303 Sum_probs=20.6
Q ss_pred CCHHHHHHHHHHHHH-CCCcEEEEecchH
Q 013175 232 MELESLLSMTMASDK-SGLQVAIHAIGDR 259 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~-~g~~v~iHa~gd~ 259 (448)
.++..+.++++..++ .++++++|+..+.
T Consensus 175 ~~P~~v~~lv~~lk~~~~~pi~~H~Hnt~ 203 (582)
T TIGR01108 175 LTPKAAYELVSALKKRFGLPVHLHSHATT 203 (582)
T ss_pred cCHHHHHHHHHHHHHhCCCceEEEecCCC
Confidence 457778888877764 4788999987653
No 222
>PF00218 IGPS: Indole-3-glycerol phosphate synthase; InterPro: IPR013798 Indole-3-glycerol phosphate synthase (4.1.1.48 from EC) (IGPS) catalyses the fourth step in the biosynthesis of tryptophan, the ring closure of 1-(2-carboxy-phenylamino)-1-deoxyribulose into indol-3-glycerol-phosphate. In some bacteria, IGPS is a single chain enzyme. In others, such as Escherichia coli, it is the N-terminal domain of a bifunctional enzyme that also catalyses N-(5'-phosphoribosyl)anthranilate isomerase (5.3.1.24 from EC) (PRAI) activity (see IPR001240 from INTERPRO), the third step of tryptophan biosynthesis. In fungi, IGPS is the central domain of a trifunctional enzyme that contains a PRAI C-terminal domain and a glutamine amidotransferase (2.4.2 from EC) (GATase) N-terminal domain (see IPR000991 from INTERPRO). A structure of the IGPS domain of the bifunctional enzyme from the mesophilic bacterium E. coli (eIGPS) has been compared with the monomeric indole-3-glycerol phosphate synthase from the hyperthermophilic archaeon Sulfolobus solfataricus (sIGPS). Both are single-domain (beta/alpha)8 barrel proteins, with one (eIGPS) or two (sIGPS) additional helices inserted before the first beta strand []. ; GO: 0004425 indole-3-glycerol-phosphate synthase activity; PDB: 1VC4_A 1PII_A 1JCM_P 1I4N_B 1J5T_A 3TSM_B 4FB7_A 3QJA_A 1JUL_A 2C3Z_A ....
Probab=24.61 E-value=3.7e+02 Score=24.95 Aligned_cols=36 Identities=11% Similarity=0.230 Sum_probs=28.1
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEecchHHHHHHHH
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAIGDRANDLVLD 266 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~ 266 (448)
.++++.|+++++.|++.|+.+.+-+.....++.+++
T Consensus 141 ~L~~~~l~~l~~~a~~lGle~lVEVh~~~El~~al~ 176 (254)
T PF00218_consen 141 ILSDDQLEELLELAHSLGLEALVEVHNEEELERALE 176 (254)
T ss_dssp GSGHHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHcCCCeEEEECCHHHHHHHHH
Confidence 357888999999999999999988877666655553
No 223
>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.
Probab=24.52 E-value=1.1e+02 Score=23.42 Aligned_cols=30 Identities=17% Similarity=0.180 Sum_probs=23.8
Q ss_pred CCCCeEEEEeccCchhhhcHHHHHHcCCCC
Q 013175 43 TPHNPVWLSRMDGHMGLANSVALQLVGITN 72 (448)
Q Consensus 43 ~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~~ 72 (448)
.+++||+++..+|..+......|...|+++
T Consensus 56 ~~~~~vv~~c~~g~rs~~~~~~l~~~G~~~ 85 (101)
T cd01528 56 NPDKDIVVLCHHGGRSMQVAQWLLRQGFEN 85 (101)
T ss_pred CCCCeEEEEeCCCchHHHHHHHHHHcCCcc
Confidence 358999999988877777777788888863
No 224
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=24.42 E-value=96 Score=23.40 Aligned_cols=30 Identities=10% Similarity=-0.078 Sum_probs=25.2
Q ss_pred hCCCCeEEEEeccCchhhhcHHHHHHcCCC
Q 013175 42 ITPHNPVWLSRMDGHMGLANSVALQLVGIT 71 (448)
Q Consensus 42 ~~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~ 71 (448)
..++.||+++..+|+.+..-...|+.+|++
T Consensus 53 ~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 82 (96)
T cd01529 53 PGRATRYVLTCDGSLLARFAAQELLALGGK 82 (96)
T ss_pred CCCCCCEEEEeCChHHHHHHHHHHHHcCCC
Confidence 367899999999888887777788888986
No 225
>PLN02538 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Probab=23.89 E-value=99 Score=32.18 Aligned_cols=25 Identities=20% Similarity=0.462 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHCCC-cEEEEecch
Q 013175 234 LESLLSMTMASDKSGL-QVAIHAIGD 258 (448)
Q Consensus 234 ~~~l~~~~~~a~~~g~-~v~iHa~gd 258 (448)
.+.|..+++.|.+.|+ .|.+|+..|
T Consensus 144 ~~Hl~al~~~a~~~gv~~v~vH~f~D 169 (558)
T PLN02538 144 LDQLQLLLKGAAERGAKRIRVHVLTD 169 (558)
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEEcC
Confidence 5789999999999998 999999865
No 226
>PRK12331 oxaloacetate decarboxylase; Provisional
Probab=23.86 E-value=7.8e+02 Score=25.05 Aligned_cols=38 Identities=8% Similarity=0.070 Sum_probs=25.7
Q ss_pred CCHHHHHHHHHHHHH-CCCcEEEEecchH--HHHHHHHHHH
Q 013175 232 MELESLLSMTMASDK-SGLQVAIHAIGDR--ANDLVLDMYK 269 (448)
Q Consensus 232 ~~~~~l~~~~~~a~~-~g~~v~iHa~gd~--a~~~~l~a~~ 269 (448)
.++..+.++++..++ .++++.+|+..+. ++...+.+++
T Consensus 180 l~P~~v~~lv~alk~~~~~pi~~H~Hnt~GlA~AN~laAie 220 (448)
T PRK12331 180 LTPYVAYELVKRIKEAVTVPLEVHTHATSGIAEMTYLKAIE 220 (448)
T ss_pred CCHHHHHHHHHHHHHhcCCeEEEEecCCCCcHHHHHHHHHH
Confidence 456777777777664 4789999997664 4445555554
No 227
>PRK08123 histidinol-phosphatase; Reviewed
Probab=23.69 E-value=89 Score=29.24 Aligned_cols=53 Identities=15% Similarity=0.039 Sum_probs=32.3
Q ss_pred hhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCC
Q 013175 292 SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP 352 (448)
Q Consensus 292 ~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p 352 (448)
.+.++.+++.|+.+++....+... ..+. .. ....-++...+.|+++++|||+.
T Consensus 200 ~~il~~~~~~g~~lEINtsgl~~~------~~~~-~y-P~~~il~~~~e~g~~itlgSDAH 252 (270)
T PRK08123 200 EDILALIKKRGYELDFNTAGLRKP------YCGE-PY-PPGEIITLAKKLGIPLVYGSDAH 252 (270)
T ss_pred HHHHHHHHHcCCEEEEEchhhcCC------CCCC-CC-CcHHHHHHHHHcCCCEEEeCCCC
Confidence 355677888999999876543210 0110 00 01123456677899999999974
No 228
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=23.58 E-value=5.9e+02 Score=24.69 Aligned_cols=112 Identities=15% Similarity=0.167 Sum_probs=58.8
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEec-chHHH-HHHHHHHHHhHHhcCCCCCCCe-EEecccCChhhHHHHHhCCcE-Ee
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAI-GDRAN-DLVLDMYKSVVVTTGKRDQRFR-IEHAQHLASGTAARFGDQGIV-AS 306 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~-gd~a~-~~~l~a~~~~~~~~~~~~~r~~-i~H~~~~~~~~i~~~~~~gv~-~~ 306 (448)
.++.++++++++.+.+.|.. .++.. |+.-+ ....+.++.+.+ .+ .+.. ...+..++++.++++++.|+. +.
T Consensus 36 ~l~~e~~~~ii~~~~~~g~~-~v~~~GGEPll~~~~~~ii~~~~~-~g---~~~~l~TNG~ll~~e~~~~L~~~g~~~v~ 110 (358)
T TIGR02109 36 ELTTEEWTDVLTQAAELGVL-QLHFSGGEPLARPDLVELVAHARR-LG---LYTNLITSGVGLTEARLDALADAGLDHVQ 110 (358)
T ss_pred CCCHHHHHHHHHHHHhcCCc-EEEEeCccccccccHHHHHHHHHH-cC---CeEEEEeCCccCCHHHHHHHHhCCCCEEE
Confidence 46888899999999888853 34444 33221 223343433322 22 2222 334456788889999988753 33
Q ss_pred eccccccCchhHHHHhcCHh-hhhhhhhhHHHHHHcCCceeecC
Q 013175 307 MQPQHLLDDADSARKKLGVD-RAERESYLFQSLLANNALLALGS 349 (448)
Q Consensus 307 ~~P~~~~~~~~~~~~~~g~~-r~~~~~~~~~~~~~~Gv~v~~gS 349 (448)
+.-... +.+.+....|.. -.++....++.+.+.|+.+.+.+
T Consensus 111 iSldg~--~~e~~d~~rg~~g~f~~v~~~i~~l~~~g~~v~v~~ 152 (358)
T TIGR02109 111 LSFQGV--DEALADRIAGYKNAFEQKLAMARAVKAAGLPLTLNF 152 (358)
T ss_pred EeCcCC--CHHHHHHhcCCccHHHHHHHHHHHHHhCCCceEEEE
Confidence 322211 122222222211 11133445677888898776643
No 229
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=23.57 E-value=99 Score=24.03 Aligned_cols=30 Identities=20% Similarity=0.071 Sum_probs=26.2
Q ss_pred CCCeEEEEeccCchhhhcHHHHHHcCCCCC
Q 013175 44 PHNPVWLSRMDGHMGLANSVALQLVGITNL 73 (448)
Q Consensus 44 ~~~Pv~l~~~~~H~~~~Ns~al~~~gi~~~ 73 (448)
.++||+++..+|..+......|+.+|++.-
T Consensus 57 ~~~~vvlyC~~G~rS~~aa~~L~~~G~~~v 86 (101)
T TIGR02981 57 KNDTVKLYCNAGRQSGMAKDILLDMGYTHA 86 (101)
T ss_pred CCCeEEEEeCCCHHHHHHHHHHHHcCCCeE
Confidence 567999999999999999999999999753
No 230
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=23.23 E-value=5.4e+02 Score=25.75 Aligned_cols=20 Identities=15% Similarity=0.169 Sum_probs=15.4
Q ss_pred HHHHHHHHHhcCcceeEeCc
Q 013175 118 LLRASNLALSRGVTTVVDFG 137 (448)
Q Consensus 118 ~~~~~~~~~~~GvTtv~d~~ 137 (448)
.++..+.++.+|++.++-+.
T Consensus 100 Ve~Fv~ka~~nGidvfRiFD 119 (472)
T COG5016 100 VEKFVEKAAENGIDVFRIFD 119 (472)
T ss_pred HHHHHHHHHhcCCcEEEech
Confidence 45566788999999998654
No 231
>COG1387 HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only]
Probab=22.82 E-value=1.9e+02 Score=26.44 Aligned_cols=57 Identities=14% Similarity=0.063 Sum_probs=36.2
Q ss_pred CCCeEEecccC-------------ChhhHHHHHhCCcEEeeccc--cccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCc
Q 013175 280 QRFRIEHAQHL-------------ASGTAARFGDQGIVASMQPQ--HLLDDADSARKKLGVDRAERESYLFQSLLANNAL 344 (448)
Q Consensus 280 ~r~~i~H~~~~-------------~~~~i~~~~~~gv~~~~~P~--~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~ 344 (448)
....|.|.... ..+.++.+++.|+.+++... +... ...-++...+.|+.
T Consensus 125 ~v~il~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~aleins~~~~~~~----------------~~~~~~~~~e~G~~ 188 (237)
T COG1387 125 AVDILAHPGGRLLGRIDRGAYKEDIEELIELAEKNGKALEINSRPGRLDP----------------NSEILRLARELGVK 188 (237)
T ss_pred CccEEecCCccccccccccccHHHHHHHHHHHHHhCcEEeecCCcCccCc----------------hHHHHHHHHHhCCe
Confidence 45667777652 23566777888988886554 2211 11124456677999
Q ss_pred eeecCCCC
Q 013175 345 LALGSDWP 352 (448)
Q Consensus 345 v~~gSD~p 352 (448)
+++|||+.
T Consensus 189 ~~i~tDaH 196 (237)
T COG1387 189 LAIGTDAH 196 (237)
T ss_pred EEeecCcC
Confidence 99999974
No 232
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=22.55 E-value=1.3e+02 Score=23.50 Aligned_cols=31 Identities=35% Similarity=0.460 Sum_probs=25.1
Q ss_pred hCCCCeEEEEeccCchhhhcHHHHHHcCCCC
Q 013175 42 ITPHNPVWLSRMDGHMGLANSVALQLVGITN 72 (448)
Q Consensus 42 ~~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~~ 72 (448)
+.++.||+++...|+.+-.-...|+.+|+++
T Consensus 75 ~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~~ 105 (118)
T cd01449 75 ITPDKPVIVYCGSGVTACVLLLALELLGYKN 105 (118)
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHHHcCCCC
Confidence 4578999999888887777777888999863
No 233
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=22.45 E-value=1.8e+02 Score=22.94 Aligned_cols=31 Identities=19% Similarity=0.214 Sum_probs=23.4
Q ss_pred hCCCCeEEEEeccC-chhhhcHHHHHHcCCCC
Q 013175 42 ITPHNPVWLSRMDG-HMGLANSVALQLVGITN 72 (448)
Q Consensus 42 ~~~~~Pv~l~~~~~-H~~~~Ns~al~~~gi~~ 72 (448)
+.++.||+++..++ +.+-.--..|+..|+++
T Consensus 76 ~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~~ 107 (122)
T cd01448 76 ISNDDTVVVYDDGGGFFAARAWWTLRYFGHEN 107 (122)
T ss_pred CCCCCEEEEECCCCCccHHHHHHHHHHcCCCC
Confidence 45789999998884 66655567788899864
No 234
>PRK09248 putative hydrolase; Validated
Probab=22.37 E-value=3.2e+02 Score=25.01 Aligned_cols=53 Identities=11% Similarity=0.115 Sum_probs=32.0
Q ss_pred hhhHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCC
Q 013175 292 SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP 352 (448)
Q Consensus 292 ~~~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p 352 (448)
++.++.+++.|+.+++.-..+... +.|.. . .....++.+.+.|+++++|||+.
T Consensus 143 ~~~~~~~~~~g~~lEvN~~~l~~~------~~g~~-~-~~~~~~~~~~~~g~~~~~gSDAH 195 (246)
T PRK09248 143 EAVVKAAKEHNVALEINNSSFGHS------RKGSE-D-NCRAIAALCKKAGVWVALGSDAH 195 (246)
T ss_pred HHHHHHHHHhCCEEEEECCCCccC------CCCCc-C-hHHHHHHHHHHcCCeEEEeCCCC
Confidence 344677888899888765543110 01100 0 01124566788999999999974
No 235
>PF12860 PAS_7: PAS fold
Probab=21.98 E-value=67 Score=25.18 Aligned_cols=29 Identities=21% Similarity=0.163 Sum_probs=25.9
Q ss_pred CCeEEEEeccCchhhhcHHHHHHcCCCCC
Q 013175 45 HNPVWLSRMDGHMGLANSVALQLVGITNL 73 (448)
Q Consensus 45 ~~Pv~l~~~~~H~~~~Ns~al~~~gi~~~ 73 (448)
..-|++++.+++..++|.+..+++++..+
T Consensus 5 ~~Gv~v~D~~~rl~~~N~~~~~l~~~~~~ 33 (115)
T PF12860_consen 5 PQGVAVFDSDGRLVFWNQRFRELFGLPPE 33 (115)
T ss_pred CceEEEEcCCCeEEeEcHHHHHHhCCCHH
Confidence 46799999999999999999999998753
No 236
>PLN02160 thiosulfate sulfurtransferase
Probab=21.79 E-value=72 Score=26.36 Aligned_cols=31 Identities=16% Similarity=0.335 Sum_probs=27.5
Q ss_pred hCCCCeEEEEeccCchhhhcHHHHHHcCCCC
Q 013175 42 ITPHNPVWLSRMDGHMGLANSVALQLVGITN 72 (448)
Q Consensus 42 ~~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~~ 72 (448)
+.++.||+++..+|+.+..-..+|...|++.
T Consensus 78 ~~~~~~IivyC~sG~RS~~Aa~~L~~~G~~~ 108 (136)
T PLN02160 78 LNPADDILVGCQSGARSLKATTELVAAGYKK 108 (136)
T ss_pred cCCCCcEEEECCCcHHHHHHHHHHHHcCCCC
Confidence 3578999999999999999999999999874
No 237
>PRK08444 hypothetical protein; Provisional
Probab=21.35 E-value=7.8e+02 Score=24.10 Aligned_cols=68 Identities=16% Similarity=0.217 Sum_probs=40.8
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEec-c---hHHHHHHHHHHHHhHHhcCCCCCCCeEEec-------------ccCChh
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAI-G---DRANDLVLDMYKSVVVTTGKRDQRFRIEHA-------------QHLASG 293 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~-g---d~a~~~~l~a~~~~~~~~~~~~~r~~i~H~-------------~~~~~~ 293 (448)
.++.+++.+.++.+.+.|..- +|.. | +..++...+.++.+.+..+ +.-.|+ .....+
T Consensus 79 ~ls~eeI~~~a~~a~~~G~~e-i~iv~G~~p~~~~e~y~e~ir~Ik~~~p-----~i~i~a~s~~Ei~~~a~~~g~~~~e 152 (353)
T PRK08444 79 TMSHEEILEIVKNSVKRGIKE-VHIVSAHNPNYGYEWYLEIFKKIKEAYP-----NLHVKAMTAAEVDFLSRKFGKSYEE 152 (353)
T ss_pred cCCHHHHHHHHHHHHHCCCCE-EEEeccCCCCCCHHHHHHHHHHHHHHCC-----CceEeeCCHHHHHHHHHHcCCCHHH
Confidence 468999999999999888642 2322 2 1124455566665554432 222332 133457
Q ss_pred hHHHHHhCCcE
Q 013175 294 TAARFGDQGIV 304 (448)
Q Consensus 294 ~i~~~~~~gv~ 304 (448)
.+.++++.|+.
T Consensus 153 ~l~~LkeAGl~ 163 (353)
T PRK08444 153 VLEDMLEYGVD 163 (353)
T ss_pred HHHHHHHhCcc
Confidence 88899998874
No 238
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=21.32 E-value=7.8e+02 Score=24.08 Aligned_cols=80 Identities=15% Similarity=0.184 Sum_probs=44.8
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEec------chHHHHHHHHHHHHh---------------HHhcCCCCCCCeEEeccc
Q 013175 231 VMELESLLSMTMASDKSGLQVAIHAI------GDRANDLVLDMYKSV---------------VVTTGKRDQRFRIEHAQH 289 (448)
Q Consensus 231 ~~~~~~l~~~~~~a~~~g~~v~iHa~------gd~a~~~~l~a~~~~---------------~~~~~~~~~r~~i~H~~~ 289 (448)
.++.++++++++.||++|..+.+=.+ .-..+...++.+.+. ..+.+ ++.++|+.+...
T Consensus 45 nfs~~~l~e~i~~ah~~gkk~~V~~N~~~~~~~~~~~~~~l~~l~e~GvDaviv~Dpg~i~l~~e~~-p~l~ih~S~q~~ 123 (347)
T COG0826 45 NFSVEDLAEAVELAHSAGKKVYVAVNTLLHNDELETLERYLDRLVELGVDAVIVADPGLIMLARERG-PDLPIHVSTQAN 123 (347)
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEEeccccccchhhHHHHHHHHHHHcCCCEEEEcCHHHHHHHHHhC-CCCcEEEeeeEe
Confidence 57888999999999999997655443 222222333332221 11111 234555555433
Q ss_pred C-ChhhHHHHHhCCcEEeecccc
Q 013175 290 L-ASGTAARFGDQGIVASMQPQH 311 (448)
Q Consensus 290 ~-~~~~i~~~~~~gv~~~~~P~~ 311 (448)
+ +.+.++-++++|+.-.+.|.-
T Consensus 124 v~N~~~~~f~~~~G~~rvVl~rE 146 (347)
T COG0826 124 VTNAETAKFWKELGAKRVVLPRE 146 (347)
T ss_pred cCCHHHHHHHHHcCCEEEEeCcc
Confidence 3 456666677777665555543
No 239
>COG0788 PurU Formyltetrahydrofolate hydrolase [Nucleotide transport and metabolism]
Probab=21.21 E-value=1.4e+02 Score=27.79 Aligned_cols=92 Identities=15% Similarity=0.170 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHCCCcEEEEec--c--hHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhC--CcEEeecc
Q 013175 236 SLLSMTMASDKSGLQVAIHAI--G--DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQ--GIVASMQP 309 (448)
Q Consensus 236 ~l~~~~~~a~~~g~~v~iHa~--g--d~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~--gv~~~~~P 309 (448)
.++.. +..+|+|.+-=.. + ..+-.+.++.+++. + .+.-+-.--.+.++++..+++... ++.-|+.|
T Consensus 129 dl~~~---v~~~~IPfhhip~~~~~k~e~E~~~~~ll~~~----~-~DlvVLARYMqILS~d~~~~~~g~iINIHHSFLP 200 (287)
T COG0788 129 DLRPL---VERFDIPFHHIPVTKENKAEAEARLLELLEEY----G-ADLVVLARYMQILSPDFVERFPGKIINIHHSFLP 200 (287)
T ss_pred HHHHH---HHHcCCCeeeccCCCCcchHHHHHHHHHHHHh----C-CCEEeehhhHhhCCHHHHHhccCcEEEecccccc
Confidence 45554 4678888762211 1 12233344444433 2 111111122356788888888542 22223333
Q ss_pred ccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCCC
Q 013175 310 QHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV 353 (448)
Q Consensus 310 ~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p~ 353 (448)
.| .+..|++.+.++||++...|=+-+
T Consensus 201 aF------------------~GA~PY~QA~eRGVKlIGATAHYV 226 (287)
T COG0788 201 AF------------------IGANPYHQAYERGVKLIGATAHYV 226 (287)
T ss_pred cC------------------CCCChHHHHHhcCCeEeeeeeeec
Confidence 33 345699999999999999987644
No 240
>PRK00162 glpE thiosulfate sulfurtransferase; Validated
Probab=20.95 E-value=1.3e+02 Score=23.21 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=28.2
Q ss_pred hhhhhCCCCeEEEEeccCchhhhcHHHHHHcCCCC
Q 013175 38 WIDDITPHNPVWLSRMDGHMGLANSVALQLVGITN 72 (448)
Q Consensus 38 ~LD~~~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~~ 72 (448)
.++.+-.++||+++-.+|..+..-...|+..|++.
T Consensus 51 ~~~~~~~~~~ivv~c~~g~~s~~a~~~L~~~G~~~ 85 (108)
T PRK00162 51 FMRQADFDTPVMVMCYHGNSSQGAAQYLLQQGFDV 85 (108)
T ss_pred HHHhcCCCCCEEEEeCCCCCHHHHHHHHHHCCchh
Confidence 45566688999999988988877777888999863
No 241
>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.
Probab=20.82 E-value=1.5e+02 Score=22.06 Aligned_cols=35 Identities=26% Similarity=0.479 Sum_probs=27.6
Q ss_pred hhhhhCCCCeEEEEeccCchhhhcHHHHHHcCCCC
Q 013175 38 WIDDITPHNPVWLSRMDGHMGLANSVALQLVGITN 72 (448)
Q Consensus 38 ~LD~~~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~~ 72 (448)
.+..+.++.||+++..+|..+..=...|+..|++.
T Consensus 49 ~~~~~~~~~~ivv~c~~g~~s~~a~~~l~~~G~~~ 83 (96)
T cd01444 49 WLGDLDRDRPVVVYCYHGNSSAQLAQALREAGFTD 83 (96)
T ss_pred HHhhcCCCCCEEEEeCCCChHHHHHHHHHHcCCce
Confidence 34566789999999998888776677888888764
No 242
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=20.79 E-value=1.3e+02 Score=29.52 Aligned_cols=26 Identities=15% Similarity=0.151 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHCCCcEEE-EecchHH
Q 013175 235 ESLLSMTMASDKSGLQVAI-HAIGDRA 260 (448)
Q Consensus 235 ~~l~~~~~~a~~~g~~v~i-Ha~gd~a 260 (448)
..+.++++.|+++|.++++ |+....+
T Consensus 172 ~~v~~~~~la~~~~~~i~i~h~ss~~~ 198 (374)
T cd01317 172 IMVARDLELAEATGARVHFQHLSTARS 198 (374)
T ss_pred HHHHHHHHHHHHhCCcEEEEeCCCHHH
Confidence 5788999999999999998 6554333
No 243
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=20.75 E-value=1.3e+02 Score=28.35 Aligned_cols=39 Identities=18% Similarity=0.181 Sum_probs=30.8
Q ss_pred hCCCCeEEEEeccCchhhhcHHHHHHcCCCCCCCCCCCCe
Q 013175 42 ITPHNPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGGT 81 (448)
Q Consensus 42 ~~~~~Pv~l~~~~~H~~~~Ns~al~~~gi~~~~~~~~gg~ 81 (448)
+.+++||+++..+|+.+-..-.+|+.+|+.+ ...-+||.
T Consensus 228 ~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~~-v~~y~Gs~ 266 (281)
T PRK11493 228 VSFDRPIIASCGSGVTAAVVVLALATLDVPN-VKLYDGAW 266 (281)
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHHHcCCCC-ceeeCCCH
Confidence 4688999999999999999999999999863 22334543
No 244
>PRK09236 dihydroorotase; Reviewed
Probab=20.41 E-value=2.4e+02 Score=28.51 Aligned_cols=66 Identities=18% Similarity=0.256 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEE---ecccCChhhHHHHHhCCcEEeeccc
Q 013175 235 ESLLSMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIE---HAQHLASGTAARFGDQGIVASMQPQ 310 (448)
Q Consensus 235 ~~l~~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~---H~~~~~~~~i~~~~~~gv~~~~~P~ 310 (448)
..+.++++.|++.|.++++|..... ..++.+++... .+.+.+.+ |+-+++++++.. .|..+.++|.
T Consensus 216 ~av~~~~~la~~~~~~~hi~h~st~---~~~~~i~~~~~----~g~~vt~e~~~H~l~l~~~~~~~---~~~~~~~~Pp 284 (444)
T PRK09236 216 KSSSLAVSLAKKHGTRLHVLHISTA---KELSLFENGPL----AEKRITAEVCVHHLWFDDSDYAR---LGNLIKCNPA 284 (444)
T ss_pred HHHHHHHHHHHHHCCCEEEEeCCCH---HHHHHHHHHHH----CCCCEEEEEchhhhhcCHHHHhc---cCceEEECCC
Confidence 3567889999999999999654432 22333333322 12344444 444667666653 4777777775
No 245
>PRK06740 histidinol-phosphatase; Validated
Probab=20.31 E-value=1.4e+02 Score=28.91 Aligned_cols=51 Identities=14% Similarity=0.140 Sum_probs=30.6
Q ss_pred hHHHHHhCCcEEeeccccccCchhHHHHhcCHhhhhhhhhhHHHHHHcCCceeecCCCC
Q 013175 294 TAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP 352 (448)
Q Consensus 294 ~i~~~~~~gv~~~~~P~~~~~~~~~~~~~~g~~r~~~~~~~~~~~~~~Gv~v~~gSD~p 352 (448)
.++.+++.|+.+++...+.+.... . ..-| ...-++.+.+.|+++++|||+.
T Consensus 244 I~~a~~~~g~~lEINt~~~~r~~~--~-e~yP-----~~~il~~~~e~Gv~~tlgSDAH 294 (331)
T PRK06740 244 IARALVETNTATEINAGLYYRYPV--R-EMCP-----SPLFLQVLAKHEVPITLSSDAH 294 (331)
T ss_pred HHHHHHHcCCEEEEECccccCCCC--C-CCCc-----CHHHHHHHHHCCCeEEEeeCCC
Confidence 346677899999988753111000 0 0001 1123567788899999999974
No 246
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=20.05 E-value=5.3e+02 Score=21.64 Aligned_cols=71 Identities=10% Similarity=0.070 Sum_probs=43.8
Q ss_pred HHHHHHHHCCCcEEEEecchHHHHHHHHHHHHhHHhcCCCCCCCeEEecccCChhhHHHHHhCCcEEeecccc
Q 013175 239 SMTMASDKSGLQVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQH 311 (448)
Q Consensus 239 ~~~~~a~~~g~~v~iHa~gd~a~~~~l~a~~~~~~~~~~~~~r~~i~H~~~~~~~~i~~~~~~gv~~~~~P~~ 311 (448)
+++..|.+.+..+..=|.-+.........+-+...+.|.. ...+.=...+.++++..+++.|+.-.+.|.+
T Consensus 54 e~v~aA~~~dv~vIgvSsl~g~h~~l~~~lve~lre~G~~--~i~v~~GGvip~~d~~~l~~~G~~~if~pgt 124 (143)
T COG2185 54 EAVRAAVEEDVDVIGVSSLDGGHLTLVPGLVEALREAGVE--DILVVVGGVIPPGDYQELKEMGVDRIFGPGT 124 (143)
T ss_pred HHHHHHHhcCCCEEEEEeccchHHHHHHHHHHHHHHhCCc--ceEEeecCccCchhHHHHHHhCcceeeCCCC
Confidence 5566666777777666654444433333333333333432 2223455577888899999999999998876
Done!