Query 013179
Match_columns 448
No_of_seqs 320 out of 2495
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 05:40:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013179.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013179hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 7.7E-49 2.6E-53 374.3 30.0 288 14-343 9-300 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 3.5E-46 1.2E-50 354.8 34.2 268 31-337 16-283 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 2.1E-46 7.2E-51 357.0 31.0 273 31-343 12-285 (306)
4 2vpj_A Kelch-like protein 12; 100.0 4.9E-46 1.7E-50 353.6 29.8 271 30-340 14-288 (301)
5 2xn4_A Kelch-like protein 2; s 100.0 1.1E-44 3.8E-49 344.4 33.2 261 2-304 40-302 (302)
6 1zgk_A Kelch-like ECH-associat 100.0 3E-44 1E-48 342.6 32.0 256 2-300 49-308 (308)
7 3ii7_A Kelch-like protein 7; p 100.0 7.5E-44 2.6E-48 339.4 31.5 257 2-302 34-295 (306)
8 2vpj_A Kelch-like protein 12; 100.0 1.7E-43 5.6E-48 336.1 32.2 257 2-301 41-300 (301)
9 2uvk_A YJHT; unknown function, 100.0 7.5E-44 2.6E-48 346.8 29.3 288 15-337 5-349 (357)
10 4asc_A Kelch repeat and BTB do 100.0 3.5E-44 1.2E-48 343.2 25.3 271 2-309 23-305 (315)
11 4asc_A Kelch repeat and BTB do 100.0 1.6E-43 5.4E-48 338.6 26.6 261 31-336 5-283 (315)
12 2woz_A Kelch repeat and BTB do 100.0 2.6E-43 8.9E-48 337.5 26.7 270 2-308 34-314 (318)
13 2woz_A Kelch repeat and BTB do 100.0 1E-42 3.5E-47 333.4 29.7 270 18-336 7-293 (318)
14 2zwa_A Leucine carboxyl methyl 100.0 5.4E-40 1.9E-44 345.3 26.3 285 15-324 384-692 (695)
15 2uvk_A YJHT; unknown function, 100.0 1.2E-37 4.2E-42 302.9 25.3 253 2-285 43-351 (357)
16 2zwa_A Leucine carboxyl methyl 100.0 2.7E-35 9.2E-40 309.6 25.1 239 72-336 384-641 (695)
17 1k3i_A Galactose oxidase precu 100.0 2.5E-34 8.4E-39 301.7 20.4 306 2-344 176-511 (656)
18 1k3i_A Galactose oxidase precu 100.0 4.3E-33 1.5E-37 292.2 21.8 281 2-311 229-531 (656)
19 3dsm_A Uncharacterized protein 97.6 0.014 4.8E-07 54.7 22.5 207 23-277 87-303 (328)
20 3mbr_X Glutamine cyclotransfer 97.6 0.028 9.5E-07 50.1 22.5 189 78-309 22-223 (243)
21 3v9f_A Two-component system se 97.5 0.0082 2.8E-07 63.6 21.0 228 28-312 415-648 (781)
22 3dsm_A Uncharacterized protein 97.5 0.071 2.4E-06 49.8 26.5 232 23-308 47-285 (328)
23 3mbr_X Glutamine cyclotransfer 97.4 0.032 1.1E-06 49.7 20.3 187 24-252 24-223 (243)
24 4ery_A WD repeat-containing pr 97.3 0.1 3.6E-06 47.8 23.7 226 29-313 33-260 (312)
25 4a2l_A BT_4663, two-component 97.2 0.029 9.9E-07 59.5 21.2 232 24-312 410-651 (795)
26 3nol_A Glutamine cyclotransfer 97.2 0.073 2.5E-06 47.9 20.5 187 80-309 46-244 (262)
27 1k8k_C P40, ARP2/3 complex 41 97.1 0.14 4.9E-06 47.8 23.2 116 25-164 14-129 (372)
28 3nol_A Glutamine cyclotransfer 97.1 0.037 1.3E-06 49.8 17.5 192 19-252 41-244 (262)
29 1l0q_A Surface layer protein; 97.0 0.071 2.4E-06 50.6 19.7 187 31-282 2-195 (391)
30 3nok_A Glutaminyl cyclase; bet 96.9 0.071 2.4E-06 48.0 17.9 156 24-224 58-215 (268)
31 4aez_A CDC20, WD repeat-contai 96.9 0.15 5.2E-06 48.7 21.9 224 29-312 144-371 (401)
32 1gxr_A ESG1, transducin-like e 96.9 0.16 5.5E-06 46.6 21.1 219 29-312 107-328 (337)
33 2iwa_A Glutamine cyclotransfer 96.8 0.26 8.9E-06 44.5 21.2 202 23-277 24-238 (266)
34 3nok_A Glutaminyl cyclase; bet 96.8 0.11 3.9E-06 46.7 18.1 156 79-280 57-214 (268)
35 3v9f_A Two-component system se 96.8 0.073 2.5E-06 56.2 19.7 225 27-308 370-600 (781)
36 3q7m_A Lipoprotein YFGL, BAMB; 96.8 0.38 1.3E-05 45.4 29.3 209 26-308 99-325 (376)
37 1rwi_B Serine/threonine-protei 96.7 0.25 8.4E-06 44.0 20.5 222 23-310 27-253 (270)
38 2z2n_A Virginiamycin B lyase; 96.7 0.33 1.1E-05 43.7 23.5 220 24-308 61-283 (299)
39 1q7f_A NHL, brain tumor CG1071 96.6 0.37 1.3E-05 43.4 24.4 230 24-308 34-268 (286)
40 2hqs_A Protein TOLB; TOLB, PAL 96.6 0.15 5E-06 49.4 19.2 205 29-284 188-395 (415)
41 3q7m_A Lipoprotein YFGL, BAMB; 96.6 0.5 1.7E-05 44.6 25.0 196 46-308 153-366 (376)
42 3ow8_A WD repeat-containing pr 96.6 0.47 1.6E-05 43.8 22.6 220 30-313 91-313 (321)
43 2hqs_A Protein TOLB; TOLB, PAL 96.5 0.24 8.3E-06 47.8 20.2 213 46-311 159-374 (415)
44 3jrp_A Fusion protein of prote 96.5 0.18 6.2E-06 47.1 18.8 109 29-163 21-135 (379)
45 4a2l_A BT_4663, two-component 96.5 0.24 8.4E-06 52.3 21.6 228 26-308 363-603 (795)
46 2z2n_A Virginiamycin B lyase; 96.5 0.46 1.6E-05 42.7 22.9 220 23-308 18-242 (299)
47 2xbg_A YCF48-like protein; pho 96.4 0.64 2.2E-05 43.2 22.5 238 3-309 26-268 (327)
48 3bws_A Protein LP49; two-domai 96.3 0.54 1.9E-05 45.0 21.4 206 26-280 129-338 (433)
49 4ery_A WD repeat-containing pr 96.3 0.61 2.1E-05 42.4 24.8 194 29-279 75-271 (312)
50 3ow8_A WD repeat-containing pr 96.3 0.59 2E-05 43.1 20.6 221 31-313 48-271 (321)
51 3zwl_B Eukaryotic translation 96.2 0.55 1.9E-05 43.5 20.3 111 29-163 42-152 (369)
52 2xbg_A YCF48-like protein; pho 96.2 0.8 2.7E-05 42.5 22.7 219 29-309 88-311 (327)
53 1l0q_A Surface layer protein; 96.2 0.21 7E-06 47.3 17.1 192 26-280 38-237 (391)
54 1p22_A F-BOX/WD-repeat protein 96.2 1 3.4E-05 43.4 23.8 216 30-313 142-357 (435)
55 2ojh_A Uncharacterized protein 96.1 0.27 9.3E-06 43.8 17.0 190 44-284 20-214 (297)
56 1r5m_A SIR4-interacting protei 96.1 0.73 2.5E-05 43.6 20.8 221 29-312 118-352 (425)
57 1gxr_A ESG1, transducin-like e 96.1 0.44 1.5E-05 43.5 18.5 223 28-312 60-287 (337)
58 3jro_A Fusion protein of prote 96.0 0.095 3.3E-06 55.1 15.1 110 29-163 19-133 (753)
59 1r5m_A SIR4-interacting protei 96.0 0.7 2.4E-05 43.7 20.1 65 86-164 216-280 (425)
60 3dwl_C Actin-related protein 2 96.0 0.072 2.5E-06 50.2 12.8 111 29-164 21-133 (377)
61 1pjx_A Dfpase, DIISOPROPYLFLUO 96.0 0.43 1.5E-05 43.4 17.7 132 23-168 21-167 (314)
62 2xdw_A Prolyl endopeptidase; a 95.9 0.39 1.3E-05 50.0 19.0 217 29-283 134-376 (710)
63 1k8k_C P40, ARP2/3 complex 41 95.9 1.1 3.8E-05 41.5 23.1 111 28-161 61-172 (372)
64 3bws_A Protein LP49; two-domai 95.8 0.45 1.6E-05 45.6 18.0 207 29-282 179-396 (433)
65 4gga_A P55CDC, cell division c 95.8 1.1 3.8E-05 42.8 20.8 106 29-163 157-262 (420)
66 2iwa_A Glutamine cyclotransfer 95.8 1 3.5E-05 40.6 19.3 190 80-312 24-228 (266)
67 3mkq_A Coatomer beta'-subunit; 95.7 0.63 2.2E-05 48.8 19.8 107 29-163 23-129 (814)
68 1qhu_A Protein (hemopexin); be 95.7 0.98 3.4E-05 44.1 19.4 60 30-113 158-217 (460)
69 1vyh_C Platelet-activating fac 95.6 1.2 3.9E-05 42.7 20.0 108 29-165 118-226 (410)
70 2ojh_A Uncharacterized protein 95.6 0.59 2E-05 41.5 16.7 212 28-284 50-266 (297)
71 1kb0_A Quinohemoprotein alcoho 95.5 2.7 9.1E-05 43.5 24.9 123 29-169 76-208 (677)
72 2qc5_A Streptogramin B lactona 95.5 1.3 4.3E-05 39.7 23.9 218 24-308 66-289 (300)
73 2ovr_B FBW7, F-BOX/WD repeat p 95.5 1.9 6.4E-05 41.5 23.9 213 32-312 170-382 (445)
74 2qc5_A Streptogramin B lactona 95.5 1.3 4.5E-05 39.6 23.9 220 23-308 23-247 (300)
75 3azo_A Aminopeptidase; POP fam 95.5 0.77 2.6E-05 47.0 19.1 215 29-285 139-378 (662)
76 3fm0_A Protein CIAO1; WDR39,SG 95.4 0.87 3E-05 42.4 17.8 112 28-163 25-137 (345)
77 3ott_A Two-component system se 95.4 2.1 7E-05 44.8 22.3 227 28-312 381-618 (758)
78 3g4e_A Regucalcin; six bladed 95.4 1.4 4.8E-05 40.0 18.7 224 30-311 24-263 (297)
79 3no2_A Uncharacterized protein 95.3 1.5 5.3E-05 39.5 21.9 212 31-308 5-230 (276)
80 3vgz_A Uncharacterized protein 95.2 1.9 6.3E-05 39.6 25.9 204 31-282 53-268 (353)
81 3zwl_B Eukaryotic translation 95.2 1.5 5.2E-05 40.3 18.7 114 29-162 84-206 (369)
82 2z3z_A Dipeptidyl aminopeptida 95.1 0.93 3.2E-05 46.8 18.5 194 46-278 235-437 (706)
83 1p22_A F-BOX/WD-repeat protein 95.0 1.2 4E-05 42.9 18.0 185 30-277 182-366 (435)
84 3e5z_A Putative gluconolactona 95.0 1.1 3.8E-05 40.4 16.9 124 23-169 31-168 (296)
85 1nir_A Nitrite reductase; hemo 95.0 1.3 4.5E-05 44.4 18.6 152 102-285 248-416 (543)
86 3e5z_A Putative gluconolactona 95.0 1.3 4.3E-05 40.0 17.1 197 26-279 75-289 (296)
87 4gqb_B Methylosome protein 50; 94.9 1.1 3.6E-05 42.0 16.8 177 86-313 138-323 (344)
88 3vgz_A Uncharacterized protein 94.9 2.2 7.6E-05 39.1 25.8 211 24-282 93-309 (353)
89 3jrp_A Fusion protein of prote 94.9 1.4 4.9E-05 40.7 17.8 202 31-285 69-297 (379)
90 2bkl_A Prolyl endopeptidase; m 94.9 0.86 2.9E-05 47.2 17.5 214 29-282 130-357 (695)
91 1sq9_A Antiviral protein SKI8; 94.9 2.5 8.5E-05 39.6 19.5 110 24-162 20-157 (397)
92 1got_B GT-beta; complex (GTP-b 94.9 2.4 8.2E-05 39.1 20.3 221 29-312 65-292 (340)
93 1rwi_B Serine/threonine-protei 94.8 1.2 4.2E-05 39.3 16.2 192 23-276 70-264 (270)
94 2aq5_A Coronin-1A; WD40 repeat 94.8 1.7 5.7E-05 41.2 18.0 113 30-166 93-211 (402)
95 1vyh_C Platelet-activating fac 94.7 2.6 8.8E-05 40.2 19.3 67 86-166 203-269 (410)
96 3iuj_A Prolyl endopeptidase; h 94.7 1.6 5.6E-05 45.1 18.9 211 29-283 138-366 (693)
97 4g56_B MGC81050 protein; prote 94.7 1.2 4E-05 41.8 16.4 177 86-313 150-335 (357)
98 1sq9_A Antiviral protein SKI8; 94.6 0.89 3E-05 42.8 15.5 112 32-166 82-220 (397)
99 2pm7_B Protein transport prote 94.6 2.5 8.4E-05 38.2 17.9 109 29-163 19-133 (297)
100 1yr2_A Prolyl oligopeptidase; 94.5 1 3.5E-05 47.1 16.9 214 29-282 172-401 (741)
101 2ecf_A Dipeptidyl peptidase IV 94.5 3.7 0.00013 42.4 21.2 129 24-169 41-188 (741)
102 3c5m_A Oligogalacturonate lyas 94.5 0.69 2.4E-05 43.5 14.4 111 46-169 168-280 (396)
103 4e54_B DNA damage-binding prot 94.5 0.47 1.6E-05 45.9 13.4 109 30-163 131-241 (435)
104 3mkq_A Coatomer beta'-subunit; 94.4 5.5 0.00019 41.5 22.6 108 29-164 65-174 (814)
105 2bkl_A Prolyl endopeptidase; m 94.4 4 0.00014 42.1 21.0 209 44-284 92-315 (695)
106 3hfq_A Uncharacterized protein 94.4 2.3 7.8E-05 39.2 17.5 97 47-161 19-116 (347)
107 3hfq_A Uncharacterized protein 94.2 3.3 0.00011 38.1 19.2 124 25-168 45-178 (347)
108 2vdu_B TRNA (guanine-N(7)-)-me 94.2 3.9 0.00014 39.3 19.4 113 29-166 112-233 (450)
109 3v7d_B Cell division control p 94.1 4.3 0.00015 39.0 23.2 105 31-164 132-238 (464)
110 1pgu_A Actin interacting prote 94.1 3.4 0.00012 41.3 19.4 232 30-312 77-319 (615)
111 2dg1_A DRP35, lactonase; beta 94.1 3.5 0.00012 37.7 21.8 127 24-168 49-177 (333)
112 3ei3_B DNA damage-binding prot 94.1 1.7 5.9E-05 40.7 16.2 115 29-168 83-200 (383)
113 1got_B GT-beta; complex (GTP-b 94.1 3.6 0.00012 37.9 23.6 222 29-312 107-334 (340)
114 2hes_X YDR267CP; beta-propelle 94.0 3.6 0.00012 37.7 18.7 71 86-169 118-191 (330)
115 2z3z_A Dipeptidyl aminopeptida 94.0 2.6 8.8E-05 43.4 18.6 157 102-283 235-398 (706)
116 2xdw_A Prolyl endopeptidase; a 94.0 3.5 0.00012 42.6 19.6 212 44-285 96-332 (710)
117 2pm9_A Protein WEB1, protein t 93.9 4.2 0.00014 38.2 19.0 229 29-312 77-328 (416)
118 3u4y_A Uncharacterized protein 93.8 3.8 0.00013 37.2 18.9 196 29-283 49-259 (331)
119 2ynn_A Coatomer subunit beta'; 93.8 3.8 0.00013 37.0 20.7 107 29-163 23-129 (304)
120 3vl1_A 26S proteasome regulato 93.7 4.6 0.00016 38.0 24.0 109 29-166 107-216 (420)
121 1ri6_A Putative isomerase YBHE 93.6 4 0.00014 37.0 18.7 104 31-161 5-114 (343)
122 3v7d_B Cell division control p 93.6 5.4 0.00018 38.3 25.8 177 85-312 278-454 (464)
123 3fvz_A Peptidyl-glycine alpha- 93.5 4.5 0.00015 37.1 28.4 228 46-311 69-312 (329)
124 2ecf_A Dipeptidyl peptidase IV 93.5 3.4 0.00011 42.7 18.5 69 29-119 118-189 (741)
125 3pe7_A Oligogalacturonate lyas 93.4 0.64 2.2E-05 43.7 11.8 110 46-169 168-280 (388)
126 4gqb_B Methylosome protein 50; 93.4 3.7 0.00013 38.1 17.1 109 29-164 137-248 (344)
127 4aow_A Guanine nucleotide-bind 93.4 4.4 0.00015 36.7 19.3 137 29-197 96-236 (340)
128 3azo_A Aminopeptidase; POP fam 93.4 2.7 9.4E-05 42.8 17.3 204 46-284 102-333 (662)
129 2ad6_A Methanol dehydrogenase 93.2 7.7 0.00026 39.0 22.9 123 28-168 60-193 (571)
130 2pbi_B Guanine nucleotide-bind 93.2 5.3 0.00018 37.1 20.3 178 86-312 165-348 (354)
131 1pgu_A Actin interacting prote 93.0 7.9 0.00027 38.5 20.1 111 24-159 23-148 (615)
132 4a11_B DNA excision repair pro 93.0 4.9 0.00017 37.4 17.4 106 30-163 111-219 (408)
133 2ovr_B FBW7, F-BOX/WD repeat p 93.0 6.6 0.00023 37.5 26.0 218 32-313 210-430 (445)
134 3fm0_A Protein CIAO1; WDR39,SG 93.0 2.6 8.9E-05 39.0 15.2 186 86-313 27-217 (345)
135 2dg1_A DRP35, lactonase; beta 92.9 2.2 7.5E-05 39.0 14.5 156 86-276 55-213 (333)
136 4aez_A CDC20, WD repeat-contai 92.8 6.5 0.00022 37.0 20.3 182 46-281 113-298 (401)
137 4g56_B MGC81050 protein; prote 92.8 2.8 9.5E-05 39.2 15.1 109 29-164 149-260 (357)
138 3u4y_A Uncharacterized protein 92.7 5.6 0.00019 36.0 19.4 135 30-196 9-148 (331)
139 3scy_A Hypothetical bacterial 92.6 6.4 0.00022 36.3 23.0 114 32-162 14-129 (361)
140 1q7f_A NHL, brain tumor CG1071 92.5 5.4 0.00019 35.4 19.2 182 86-310 40-226 (286)
141 3bg1_A Protein SEC13 homolog; 92.3 2.4 8.3E-05 38.7 13.8 113 29-167 23-142 (316)
142 4ggc_A P55CDC, cell division c 92.2 6.1 0.00021 35.3 20.9 107 29-164 77-183 (318)
143 3pe7_A Oligogalacturonate lyas 92.2 4.7 0.00016 37.5 16.1 216 29-284 45-281 (388)
144 1pjx_A Dfpase, DIISOPROPYLFLUO 92.1 6.3 0.00022 35.3 18.7 117 25-165 76-211 (314)
145 4a11_B DNA excision repair pro 92.1 6.8 0.00023 36.4 17.1 27 135-166 254-280 (408)
146 2fp8_A Strictosidine synthase; 92.1 7 0.00024 35.6 17.6 211 24-277 84-314 (322)
147 3dwl_C Actin-related protein 2 92.0 3.4 0.00012 38.4 14.7 112 29-163 65-178 (377)
148 3sfz_A APAF-1, apoptotic pepti 91.7 8.4 0.00029 42.5 19.7 110 29-167 625-737 (1249)
149 1jmx_B Amine dehydrogenase; ox 91.0 8.8 0.0003 34.8 18.1 116 30-164 10-136 (349)
150 1yfq_A Cell cycle arrest prote 91.0 8.8 0.0003 34.7 18.3 105 29-162 21-131 (342)
151 1nir_A Nitrite reductase; hemo 90.9 6 0.00021 39.5 15.9 106 30-167 148-262 (543)
152 1qks_A Cytochrome CD1 nitrite 90.7 12 0.0004 37.6 17.9 164 86-285 255-435 (567)
153 1erj_A Transcriptional repress 90.7 11 0.00038 35.4 22.8 109 29-166 133-242 (393)
154 2hes_X YDR267CP; beta-propelle 90.6 5 0.00017 36.7 14.2 74 29-119 117-192 (330)
155 1kv9_A Type II quinohemoprotei 90.6 17 0.00057 37.3 24.5 125 28-168 64-195 (668)
156 1ri6_A Putative isomerase YBHE 90.5 9.5 0.00033 34.4 19.4 163 87-285 141-319 (343)
157 2aq5_A Coronin-1A; WD40 repeat 90.5 6.8 0.00023 36.8 15.4 111 32-164 145-256 (402)
158 3g4e_A Regucalcin; six bladed 90.5 9 0.00031 34.4 15.6 176 46-254 73-263 (297)
159 3dr2_A Exported gluconolactona 90.5 6.4 0.00022 35.6 14.5 119 29-164 95-226 (305)
160 3k26_A Polycomb protein EED; W 90.3 11 0.00036 34.4 17.2 108 31-164 85-194 (366)
161 2pbi_B Guanine nucleotide-bind 89.9 12 0.00041 34.6 19.8 108 30-165 165-274 (354)
162 1xfd_A DIP, dipeptidyl aminope 89.8 14 0.00049 37.8 18.2 79 28-119 69-151 (723)
163 2vdu_B TRNA (guanine-N(7)-)-me 89.7 15 0.0005 35.2 19.7 66 87-166 210-275 (450)
164 2pm9_A Protein WEB1, protein t 89.5 14 0.00046 34.5 20.0 67 87-163 178-250 (416)
165 4aow_A Guanine nucleotide-bind 89.4 12 0.0004 33.7 18.7 108 31-164 51-161 (340)
166 1yr2_A Prolyl oligopeptidase; 89.4 22 0.00075 36.8 19.5 211 44-285 131-361 (741)
167 3i2n_A WD repeat-containing pr 89.4 8.6 0.00029 34.9 14.7 107 32-164 32-150 (357)
168 3jro_A Fusion protein of prote 89.3 3.1 0.00011 43.4 12.7 96 86-197 20-122 (753)
169 3b7f_A Glycosyl hydrolase, BNR 89.2 15 0.00051 34.6 20.2 215 48-308 33-297 (394)
170 4e54_B DNA damage-binding prot 89.2 2.3 7.8E-05 40.9 10.8 97 86-197 131-230 (435)
171 1itv_A MMP9; adaptive molecula 89.1 9.6 0.00033 32.3 13.7 152 81-280 11-178 (195)
172 1qhu_A Protein (hemopexin); be 88.8 18 0.00062 35.1 18.0 59 86-163 158-216 (460)
173 3iuj_A Prolyl endopeptidase; h 88.7 23 0.0008 36.3 19.2 148 102-285 259-414 (693)
174 3no2_A Uncharacterized protein 88.3 14 0.00046 33.0 16.9 63 87-167 5-71 (276)
175 3lrv_A PRE-mRNA-splicing facto 88.2 15 0.00052 33.5 20.0 193 30-278 47-246 (343)
176 1w6s_A Methanol dehydrogenase 88.1 24 0.00082 35.6 21.4 122 30-169 62-200 (599)
177 3dm0_A Maltose-binding peripla 88.1 25 0.00086 35.9 21.2 139 29-197 440-582 (694)
178 3sfz_A APAF-1, apoptotic pepti 88.0 8.2 0.00028 42.6 15.6 107 29-165 971-1077(1249)
179 3ei3_B DNA damage-binding prot 87.9 17 0.00057 33.6 18.5 145 88-276 87-236 (383)
180 3ott_A Two-component system se 87.9 5.4 0.00018 41.6 13.4 115 25-168 477-592 (758)
181 1pex_A Collagenase-3, MMP-13; 87.7 12 0.00042 31.9 14.2 152 81-281 28-197 (207)
182 3ju4_A Endo-N-acetylneuraminid 87.6 19 0.00066 34.0 22.1 194 73-275 280-513 (670)
183 2xyi_A Probable histone-bindin 87.4 20 0.00068 34.0 17.3 64 89-163 196-264 (430)
184 3c5m_A Oligogalacturonate lyas 87.4 6.4 0.00022 36.6 12.6 109 46-169 216-336 (396)
185 2pm7_B Protein transport prote 87.3 16 0.00053 32.7 16.5 63 31-112 67-133 (297)
186 3mmy_A MRNA export factor; mRN 86.7 16 0.00055 33.1 14.8 65 29-113 96-162 (368)
187 2fp8_A Strictosidine synthase; 86.3 19 0.00065 32.6 19.7 232 46-309 40-301 (322)
188 3vl1_A 26S proteasome regulato 86.0 22 0.00076 33.1 24.5 68 29-116 149-217 (420)
189 4d9s_A UVB-resistance protein 85.9 24 0.00083 33.5 19.5 18 21-38 130-147 (406)
190 2p4o_A Hypothetical protein; p 85.8 20 0.00067 32.3 23.2 120 16-163 28-148 (306)
191 1jmx_B Amine dehydrogenase; ox 85.7 7.1 0.00024 35.4 11.6 69 86-167 10-79 (349)
192 3odt_A Protein DOA1; ubiquitin 85.6 18 0.00063 31.9 18.6 149 86-283 154-303 (313)
193 2ghs_A AGR_C_1268P; regucalcin 85.5 21 0.00073 32.5 21.9 112 31-168 61-174 (326)
194 2gop_A Trilobed protease; beta 85.1 22 0.00074 32.2 17.9 192 44-284 41-259 (347)
195 3bg1_A Protein SEC13 homolog; 84.8 14 0.00049 33.3 13.2 70 31-117 71-143 (316)
196 4gga_A P55CDC, cell division c 84.6 27 0.00092 32.9 18.2 96 46-164 125-220 (420)
197 3dm0_A Maltose-binding peripla 84.5 38 0.0013 34.5 19.9 64 86-163 441-504 (694)
198 1yiq_A Quinohemoprotein alcoho 84.3 34 0.0012 35.1 17.1 126 81-226 65-201 (689)
199 3o4h_A Acylamino-acid-releasin 84.0 18 0.00063 35.9 14.7 98 48-166 134-231 (582)
200 1kb0_A Quinohemoprotein alcoho 83.8 41 0.0014 34.4 21.5 126 81-226 72-208 (677)
201 3dr2_A Exported gluconolactona 83.5 25 0.00084 31.5 16.4 115 32-169 58-185 (305)
202 1yiq_A Quinohemoprotein alcoho 83.2 44 0.0015 34.3 27.1 127 28-168 68-200 (689)
203 1qks_A Cytochrome CD1 nitrite 82.8 41 0.0014 33.6 18.4 105 31-167 167-280 (567)
204 4d9s_A UVB-resistance protein 82.7 33 0.0011 32.5 24.0 18 128-145 182-199 (406)
205 2ghs_A AGR_C_1268P; regucalcin 82.3 27 0.00091 31.8 14.0 65 87-169 61-125 (326)
206 3b7f_A Glycosyl hydrolase, BNR 82.1 27 0.00091 32.8 14.3 150 104-284 33-216 (394)
207 3i2n_A WD repeat-containing pr 82.0 25 0.00085 31.7 13.7 67 88-164 32-101 (357)
208 1yfq_A Cell cycle arrest prote 81.7 29 0.00099 31.1 15.9 69 86-169 22-96 (342)
209 2ad6_A Methanol dehydrogenase 81.6 45 0.0016 33.3 26.8 77 29-118 114-194 (571)
210 3o4h_A Acylamino-acid-releasin 81.6 18 0.00061 36.0 13.4 154 87-281 75-232 (582)
211 3odt_A Protein DOA1; ubiquitin 81.1 28 0.00096 30.6 21.1 16 267-282 246-261 (313)
212 2ymu_A WD-40 repeat protein; u 80.9 44 0.0015 32.7 19.8 63 86-163 355-417 (577)
213 1itv_A MMP9; adaptive molecula 80.5 25 0.00086 29.6 15.4 142 24-196 11-165 (195)
214 1flg_A Protein (quinoprotein e 79.4 54 0.0019 32.8 21.5 121 28-167 66-200 (582)
215 3scy_A Hypothetical bacterial 77.9 41 0.0014 30.6 21.1 51 48-111 79-129 (361)
216 3hrp_A Uncharacterized protein 77.8 48 0.0016 31.4 25.3 208 24-283 135-361 (409)
217 1erj_A Transcriptional repress 77.8 45 0.0015 31.0 20.8 93 86-197 134-228 (393)
218 3kci_A Probable E3 ubiquitin-p 77.6 47 0.0016 31.2 22.0 18 128-145 168-185 (389)
219 3lrv_A PRE-mRNA-splicing facto 77.6 41 0.0014 30.5 21.8 67 86-165 138-204 (343)
220 2xyi_A Probable histone-bindin 76.6 46 0.0016 31.4 14.2 18 140-162 196-213 (430)
221 1gen_A Gelatinase A; hydrolase 76.3 37 0.0012 29.2 14.0 65 80-160 34-103 (218)
222 2ynn_A Coatomer subunit beta'; 74.8 45 0.0016 29.6 22.2 107 29-163 65-173 (304)
223 3fvz_A Peptidyl-glycine alpha- 74.7 49 0.0017 29.9 24.2 162 86-276 154-322 (329)
224 1pby_B Quinohemoprotein amine 73.8 48 0.0016 29.4 18.6 119 24-167 38-168 (337)
225 1su3_A Interstitial collagenas 73.4 68 0.0023 31.0 14.2 153 81-282 267-438 (450)
226 3ba0_A Macrophage metalloelast 72.9 46 0.0016 31.2 12.5 153 81-281 185-355 (365)
227 3f3f_A Nucleoporin SEH1; struc 72.5 51 0.0017 29.1 21.9 110 29-164 21-145 (351)
228 3mmy_A MRNA export factor; mRN 71.8 56 0.0019 29.3 19.3 107 31-164 54-162 (368)
229 1hxn_A Hemopexin, HPX; heme, b 71.6 48 0.0017 28.5 11.5 122 15-162 9-144 (219)
230 1k32_A Tricorn protease; prote 71.3 46 0.0016 35.9 13.9 161 29-226 306-468 (1045)
231 2ymu_A WD-40 repeat protein; u 71.3 79 0.0027 30.8 21.6 68 86-168 314-381 (577)
232 3hxj_A Pyrrolo-quinoline quino 70.8 57 0.0019 29.0 17.5 101 30-168 107-211 (330)
233 2gop_A Trilobed protease; beta 70.4 61 0.0021 29.1 20.2 58 102-169 152-214 (347)
234 3iz6_a 40S ribosomal protein R 69.6 70 0.0024 29.5 24.0 59 243-313 308-367 (380)
235 3qhy_B Beta-lactamase inhibito 67.5 68 0.0023 28.6 16.8 171 21-254 33-207 (282)
236 3gre_A Serine/threonine-protei 67.2 82 0.0028 29.4 18.8 54 136-197 180-235 (437)
237 3k26_A Polycomb protein EED; W 66.6 72 0.0025 28.5 20.8 102 47-167 45-152 (366)
238 3c7x_A Matrix metalloproteinas 65.4 60 0.0021 27.2 13.1 112 24-164 55-177 (196)
239 2xe4_A Oligopeptidase B; hydro 64.9 1.3E+02 0.0045 31.0 17.1 39 395-433 571-609 (751)
240 3frx_A Guanine nucleotide-bind 64.2 80 0.0027 28.2 16.7 66 86-165 76-141 (319)
241 3qhy_B Beta-lactamase inhibito 63.4 78 0.0027 28.2 11.7 96 79-197 151-246 (282)
242 2p4o_A Hypothetical protein; p 63.4 82 0.0028 28.0 17.9 116 24-162 76-198 (306)
243 1pex_A Collagenase-3, MMP-13; 62.5 71 0.0024 27.1 16.9 152 16-196 16-183 (207)
244 1n7d_A LDL receptor, low-densi 61.7 1.5E+02 0.005 30.4 15.6 205 47-309 387-602 (699)
245 3of7_A Regulator of chromosome 60.3 1.2E+02 0.0042 29.1 18.0 18 21-38 76-93 (473)
246 1npe_A Nidogen, entactin; glyc 59.4 87 0.003 27.0 24.5 197 24-280 40-242 (267)
247 2cn3_A Xyloglucanase, beta-1,4 59.1 1.7E+02 0.0057 30.2 29.1 263 2-310 11-322 (737)
248 1k32_A Tricorn protease; prote 59.1 1.9E+02 0.0066 31.0 21.7 194 31-283 214-416 (1045)
249 1a12_A RCC1, regulator of chro 58.6 1.2E+02 0.0042 28.5 19.9 18 21-38 120-137 (413)
250 2xzm_R RACK1; ribosome, transl 58.5 1E+02 0.0036 27.7 17.8 65 29-112 86-150 (343)
251 1pby_B Quinohemoprotein amine 58.3 97 0.0033 27.2 15.4 66 89-167 3-70 (337)
252 1hxn_A Hemopexin, HPX; heme, b 57.3 92 0.0032 26.7 11.4 61 85-162 27-90 (219)
253 3frx_A Guanine nucleotide-bind 56.6 1.1E+02 0.0037 27.3 22.0 108 29-165 75-188 (319)
254 3lp9_A LS-24; SEED albumin, pl 55.6 20 0.00069 31.1 5.9 64 86-163 129-202 (227)
255 4a5s_A Dipeptidyl peptidase 4 55.5 1.8E+02 0.0063 29.6 15.6 19 267-285 344-362 (740)
256 3gre_A Serine/threonine-protei 55.3 1.3E+02 0.0045 27.9 22.2 69 86-167 181-250 (437)
257 3mvd_K Regulator of chromosome 55.2 1.4E+02 0.0048 28.1 21.4 18 21-38 136-153 (423)
258 1w6s_A Methanol dehydrogenase 55.0 1.8E+02 0.006 29.2 26.7 66 46-118 131-200 (599)
259 2p9w_A MAL S 1 allergenic prot 53.3 1.4E+02 0.0047 27.5 12.2 142 86-254 147-305 (334)
260 1nr0_A Actin interacting prote 53.1 1.8E+02 0.0062 28.8 20.9 115 29-164 200-315 (611)
261 3hrp_A Uncharacterized protein 51.6 1.6E+02 0.0054 27.7 16.3 151 86-277 141-299 (409)
262 3f3f_A Nucleoporin SEH1; struc 50.3 1.3E+02 0.0044 26.3 19.3 66 31-113 71-145 (351)
263 1sqj_A OXG-RCBH, oligoxylogluc 50.0 2.4E+02 0.0082 29.3 28.4 210 47-285 38-278 (789)
264 1ck7_A Protein (gelatinase A); 48.7 1.3E+02 0.0045 30.4 11.4 65 81-160 448-516 (631)
265 4h5i_A Guanine nucleotide-exch 48.1 1.6E+02 0.0056 26.8 18.0 131 46-197 157-290 (365)
266 3iz6_a 40S ribosomal protein R 47.6 1.7E+02 0.0057 26.8 16.0 115 29-162 259-375 (380)
267 3mvd_K Regulator of chromosome 47.5 1.8E+02 0.0063 27.2 12.5 60 79-145 252-320 (423)
268 1su3_A Interstitial collagenas 47.0 2E+02 0.0069 27.6 15.5 144 24-196 267-423 (450)
269 1xfd_A DIP, dipeptidyl aminope 46.9 2.4E+02 0.0081 28.3 14.8 109 47-169 38-150 (723)
270 1flg_A Protein (quinoprotein e 46.3 1.2E+02 0.004 30.3 10.8 77 45-143 465-545 (582)
271 3oyo_A Hemopexin fold protein 46.1 1.4E+02 0.0049 25.5 11.4 115 24-161 64-197 (225)
272 1n7d_A LDL receptor, low-densi 45.5 2.6E+02 0.009 28.5 16.8 152 85-279 463-617 (699)
273 3c7x_A Matrix metalloproteinas 43.9 1.4E+02 0.0048 24.9 10.8 143 24-196 10-166 (196)
274 2p9w_A MAL S 1 allergenic prot 43.6 2E+02 0.0067 26.5 19.7 147 132-311 142-305 (334)
275 1ck7_A Protein (gelatinase A); 41.9 2.9E+02 0.0098 27.9 13.2 114 23-164 446-568 (631)
276 1a12_A RCC1, regulator of chro 41.8 2.2E+02 0.0076 26.6 12.4 104 21-146 241-364 (413)
277 3oyo_A Hemopexin fold protein 41.6 1.7E+02 0.0057 25.1 12.8 98 85-196 69-189 (225)
278 3ju4_A Endo-N-acetylneuraminid 41.1 2.4E+02 0.0083 26.8 21.6 197 104-311 260-482 (670)
279 2xe4_A Oligopeptidase B; hydro 40.8 3.2E+02 0.011 28.1 17.0 89 101-197 294-388 (751)
280 3of7_A Regulator of chromosome 39.5 1.3E+02 0.0045 28.9 9.7 18 128-145 266-283 (473)
281 2mad_H Methylamine dehydrogena 39.3 2.3E+02 0.0079 26.1 15.3 75 85-168 277-356 (373)
282 2xzm_R RACK1; ribosome, transl 37.6 2.2E+02 0.0076 25.3 19.9 63 86-162 87-149 (343)
283 3hxj_A Pyrrolo-quinoline quino 37.3 2.1E+02 0.0072 25.0 14.4 100 26-164 143-246 (330)
284 1nr0_A Actin interacting prote 37.1 3.2E+02 0.011 27.0 24.9 112 33-168 162-276 (611)
285 3k6s_A Integrin alpha-X; cell 36.9 4.4E+02 0.015 28.6 14.7 159 21-186 335-509 (1095)
286 4ggc_A P55CDC, cell division c 34.3 2.3E+02 0.0077 24.5 18.8 60 46-117 45-104 (318)
287 3ba0_A Macrophage metalloelast 33.8 2.4E+02 0.0084 26.1 10.1 79 23-117 276-356 (365)
288 4hvt_A Ritya.17583.B, post-pro 33.3 3.1E+02 0.011 28.1 11.7 102 46-166 269-385 (711)
289 1gen_A Gelatinase A; hydrolase 32.8 2.3E+02 0.0078 24.1 16.2 151 16-196 23-193 (218)
290 2hz6_A Endoplasmic reticulum t 31.2 57 0.0019 30.3 5.3 70 23-116 2-75 (369)
291 3kci_A Probable E3 ubiquitin-p 30.8 3.2E+02 0.011 25.2 22.0 18 21-38 116-133 (389)
292 1npe_A Nidogen, entactin; glyc 29.3 2.7E+02 0.0091 23.7 21.2 181 80-309 39-226 (267)
293 3a0f_A Xyloglucanase; beta-pro 27.2 5.3E+02 0.018 26.5 27.4 237 2-284 10-292 (763)
294 1z68_A Fibroblast activation p 25.6 5.1E+02 0.018 25.8 14.9 66 103-169 225-298 (719)
295 3tc9_A Hypothetical hydrolase; 25.2 4.3E+02 0.015 24.8 12.6 110 30-168 149-263 (430)
296 3dw8_B Serine/threonine-protei 24.7 4E+02 0.014 24.3 19.5 24 29-57 38-61 (447)
297 2oiz_A Aromatic amine dehydrog 24.5 3.4E+02 0.012 24.5 9.5 65 86-163 265-335 (361)
298 1kv9_A Type II quinohemoprotei 23.7 5.7E+02 0.019 25.7 28.1 75 30-117 117-195 (668)
299 1ijq_A LDL receptor, low-densi 21.4 4.2E+02 0.015 23.4 26.5 205 46-308 10-225 (316)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=7.7e-49 Score=374.30 Aligned_cols=288 Identities=19% Similarity=0.247 Sum_probs=245.0
Q ss_pred CCCCCCCCCcEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEc
Q 013179 14 GTVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFG 93 (448)
Q Consensus 14 g~~P~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~G 93 (448)
+..|.+|.+|+++.++ ++||+|||. ....++++++||+.+++|+.++ ++|.+|.+|++++++++|||+|
T Consensus 9 ~~~~~~~~~~~~~~~~-~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~~~~~~~~lyv~G 77 (308)
T 1zgk_A 9 HSSGLVPRGSHAPKVG-RLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLA---------DLQVPRSGLAGCVVGGLLYAVG 77 (308)
T ss_dssp ------------CCCC-CCEEEECCB-SSSBCCCEEEEETTTTEEEECC---------CCSSCCBSCEEEEETTEEEEEC
T ss_pred ccCCeeeCCccccCCC-CEEEEEeCc-CCCCcceEEEEcCCCCeEeECC---------CCCcccccceEEEECCEEEEEC
Confidence 4578899999999888 789999998 5678899999999999999986 5788999999999999999999
Q ss_pred cc----CCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeec
Q 013179 94 GR----FGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLP 169 (448)
Q Consensus 94 G~----~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~ 169 (448)
|. .+...++++++||+.+++|++++ ++|.+|..|+++++++ +|||+||.+....++++++||+.+++|+.++
T Consensus 78 G~~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 153 (308)
T 1zgk_A 78 GRNNSPDGNTDSSALDCYNPMTNQWSPCA---PMSVPRNRIGVGVIDG-HIYAVGGSHGCIHHNSVERYEPERDEWHLVA 153 (308)
T ss_dssp CEEEETTEEEECCCEEEEETTTTEEEECC---CCSSCCBTCEEEEETT-EEEEECCEETTEECCCEEEEETTTTEEEECC
T ss_pred CCcCCCCCCeecceEEEECCCCCeEeECC---CCCcCccccEEEEECC-EEEEEcCCCCCcccccEEEECCCCCeEeECC
Confidence 98 55566889999999999999998 4999999999999954 9999999988778899999999999999998
Q ss_pred CCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEE
Q 013179 170 VTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLL 249 (448)
Q Consensus 170 ~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v 249 (448)
++|.+|..|+++.++++|||+||..... .++.++.||+.+++|+.++ .+|.+|..|++++.+++|||
T Consensus 154 ---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv 220 (308)
T 1zgk_A 154 ---PMLTRRIGVGVAVLNRLLYAVGGFDGTN-------RLNSAECYYPERNEWRMIT---AMNTIRSGAGVCVLHNCIYA 220 (308)
T ss_dssp ---CCSSCCBSCEEEEETTEEEEECCBCSSC-------BCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEE
T ss_pred ---CCCccccceEEEEECCEEEEEeCCCCCC-------cCceEEEEeCCCCeEeeCC---CCCCccccceEEEECCEEEE
Confidence 8999999999999999999999987654 2466777899999999997 78999999999999999999
Q ss_pred EcCCCCCCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEccCCCCCccCceEEecCCCCcc
Q 013179 250 FGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGKSTFGDIWWLVPEEDPI 329 (448)
Q Consensus 250 ~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~d~w~~~~~yd~~ 329 (448)
+||.+.. ...+++|+||+.+++|+++.. .|.+|..|+++.++++|||+||.++...++++| .||+.
T Consensus 221 ~GG~~~~-------~~~~~v~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~----~yd~~ 286 (308)
T 1zgk_A 221 AGGYDGQ-------DQLNSVERYDVETETWTFVAP---MKHRRSALGITVHQGRIYVLGGYDGHTFLDSVE----CYDPD 286 (308)
T ss_dssp ECCBCSS-------SBCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEETTEEEEECCBCSSCBCCEEE----EEETT
T ss_pred EeCCCCC-------CccceEEEEeCCCCcEEECCC---CCCCccceEEEEECCEEEEEcCcCCCcccceEE----EEcCC
Confidence 9998753 357899999999999999986 466899999999999999999998877788866 45666
Q ss_pred cCceecCCCCCCCC
Q 013179 330 AKRYTESPPKVLPE 343 (448)
Q Consensus 330 ~~~w~~~~~~~~~~ 343 (448)
+++|+..+..+.++
T Consensus 287 ~~~W~~~~~~p~~r 300 (308)
T 1zgk_A 287 TDTWSEVTRMTSGR 300 (308)
T ss_dssp TTEEEEEEECSSCC
T ss_pred CCEEeecCCCCCCc
Confidence 89999886555444
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.5e-46 Score=354.77 Aligned_cols=268 Identities=22% Similarity=0.332 Sum_probs=238.5
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECC
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTD 110 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~ 110 (448)
++||++||.+. ..++++++||+.+++|+.++ .+|.+|.+|++++++++|||+||..+...++++++||+.
T Consensus 16 ~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~ 85 (302)
T 2xn4_A 16 KLMVVVGGQAP-KAIRSVECYDFKEERWHQVA---------ELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPV 85 (302)
T ss_dssp EEEEEECCBSS-SBCCCEEEEETTTTEEEEEC---------CCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETT
T ss_pred CEEEEECCCCC-CCCCcEEEEcCcCCcEeEcc---------cCCcccccceEEEECCEEEEEeCcCCCccccceEEECCC
Confidence 78999999854 46789999999999999986 578899999999999999999999887788999999999
Q ss_pred CCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEeCCEE
Q 013179 111 IWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRL 190 (448)
Q Consensus 111 t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~l 190 (448)
+++|++++ ++|.+|..|+++++++ +|||+||.++...++++++||+.+++|+.++ ++|.+|..|+++.++++|
T Consensus 86 ~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~i 158 (302)
T 2xn4_A 86 KDQWTSVA---NMRDRRSTLGAAVLNG-LLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA---PMNTRRSSVGVGVVGGLL 158 (302)
T ss_dssp TTEEEEEC---CCSSCCBSCEEEEETT-EEEEEEEECSSCEEEEEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEE
T ss_pred CCceeeCC---CCCccccceEEEEECC-EEEEEcCCCCCccCceEEEEeCCCCeEeecC---CCCCcccCceEEEECCEE
Confidence 99999998 4999999999999965 9999999988777899999999999999998 899999999999999999
Q ss_pred EEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCcccccceeCcEE
Q 013179 191 LIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTI 270 (448)
Q Consensus 191 yv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~ 270 (448)
||+||...... ..++.++.||+.+++|+.+. .+|.+|..|++++.+++|||+||.+.. ...++++
T Consensus 159 yv~GG~~~~~~-----~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~-------~~~~~~~ 223 (302)
T 2xn4_A 159 YAVGGYDVASR-----QCLSTVECYNATTNEWTYIA---EMSTRRSGAGVGVLNNLLYAVGGHDGP-------LVRKSVE 223 (302)
T ss_dssp EEECCEETTTT-----EECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBSSS-------SBCCCEE
T ss_pred EEEeCCCCCCC-----ccccEEEEEeCCCCcEEECC---CCccccccccEEEECCEEEEECCCCCC-------cccceEE
Confidence 99999865431 12466777899999999997 789999999999999999999998753 3578999
Q ss_pred EEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEccCCCCCccCceEEecCCCCcccCceecCC
Q 013179 271 ILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGKSTFGDIWWLVPEEDPIAKRYTESP 337 (448)
Q Consensus 271 ~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~d~w~~~~~yd~~~~~w~~~~ 337 (448)
+||+++++|+.++.+ |.+|..|+++.++++|||+||.++...++++| .||+.+++|+..+
T Consensus 224 ~yd~~~~~W~~~~~~---~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~----~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 224 VYDPTTNAWRQVADM---NMCRRNAGVCAVNGLLYVVGGDDGSCNLASVE----YYNPTTDKWTVVS 283 (302)
T ss_dssp EEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEECCBCSSSBCCCEE----EEETTTTEEEECS
T ss_pred EEeCCCCCEeeCCCC---CCccccCeEEEECCEEEEECCcCCCcccccEE----EEcCCCCeEEECC
Confidence 999999999999864 56899999999999999999998777778866 5667799999885
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.1e-46 Score=357.00 Aligned_cols=273 Identities=20% Similarity=0.235 Sum_probs=239.3
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECC
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTD 110 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~ 110 (448)
+.||+|||... ++++++||+.+++|+.++ ++|.+|.+|++++++++|||+||.. ...++++++||+.
T Consensus 12 ~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~ 78 (306)
T 3ii7_A 12 DYRIALFGGSQ---PQSCRYFNPKDYSWTDIR---------CPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVV 78 (306)
T ss_dssp CEEEEEECCSS---TTSEEEEETTTTEEEECC---------CCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETT
T ss_pred ceEEEEeCCCC---CceEEEecCCCCCEecCC---------CCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCC
Confidence 78999999755 789999999999999986 5788999999999999999999998 6778999999999
Q ss_pred CCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCC-CCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEeCCE
Q 013179 111 IWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWD-GKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKR 189 (448)
Q Consensus 111 t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~-~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~ 189 (448)
+++|+.+++ +|.+|..|+++++++ +|||+||.+ .....+++++||+.+++|++++ ++|.+|..|+++.++++
T Consensus 79 ~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~ 151 (306)
T 3ii7_A 79 KDSWYSKLG---PPTPRDSLAACAAEG-KIYTSGGSEVGNSALYLFECYDTRTESWHTKP---SMLTQRCSHGMVEANGL 151 (306)
T ss_dssp TTEEEEEEC---CSSCCBSCEEEEETT-EEEEECCBBTTBSCCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTE
T ss_pred CCeEEECCC---CCccccceeEEEECC-EEEEECCCCCCCcEeeeEEEEeCCCCceEeCC---CCcCCcceeEEEEECCE
Confidence 999999984 999999999999965 999999987 5567899999999999999998 89999999999999999
Q ss_pred EEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCcccccceeCcE
Q 013179 190 LLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDT 269 (448)
Q Consensus 190 lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v 269 (448)
|||+||....... -..++.++.||+++++|+.++ .+|.+|..|++++.+++|||+||.+.. ..++++
T Consensus 152 iyv~GG~~~~~~~---~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~-------~~~~~~ 218 (306)
T 3ii7_A 152 IYVCGGSLGNNVS---GRVLNSCEVYDPATETWTELC---PMIEARKNHGLVFVKDKIFAVGGQNGL-------GGLDNV 218 (306)
T ss_dssp EEEECCEESCTTT---CEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEETT-------EEBCCE
T ss_pred EEEECCCCCCCCc---ccccceEEEeCCCCCeEEECC---CccchhhcceEEEECCEEEEEeCCCCC-------CCCceE
Confidence 9999998655421 012466777899999999998 789999999999999999999998653 367899
Q ss_pred EEEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEccCCCCCccCceEEecCCCCcccCceecCCCCCCCC
Q 013179 270 IILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGKSTFGDIWWLVPEEDPIAKRYTESPPKVLPE 343 (448)
Q Consensus 270 ~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~d~w~~~~~yd~~~~~w~~~~~~~~~~ 343 (448)
++||+.+++|+.++. .|.+|..|+++.++++|||+||.++...++++| .||+.+++|+..+..+.++
T Consensus 219 ~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~----~yd~~~~~W~~~~~~~~~r 285 (306)
T 3ii7_A 219 EYYDIKLNEWKMVSP---MPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHIL----EYNTETDKWVANSKVRAFP 285 (306)
T ss_dssp EEEETTTTEEEECCC---CSCCBSCCEEEEETTEEEEEECBCSSSBCCEEE----EEETTTTEEEEEEEEECCS
T ss_pred EEeeCCCCcEEECCC---CCCCccceeEEEECCEEEEEeCcCCCeeeeeEE----EEcCCCCeEEeCCCccccc
Confidence 999999999999976 466999999999999999999998877888876 4667799999886544443
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=4.9e-46 Score=353.56 Aligned_cols=271 Identities=20% Similarity=0.329 Sum_probs=240.5
Q ss_pred CcEEEEEcC-CCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 30 KSKVVVFGG-LVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 30 ~~~iyv~GG-~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
+++||+||| ..+...++++++||+.+++|+.++ .+|.+|.+|+++.++++||++||..+...++++++||
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d 84 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLP---------SITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLD 84 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECC---------CCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEE
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCC---------CCChhhccccEEEECCEEEEEcCCCCCccCceEEEEE
Confidence 389999999 566678899999999999999986 4688999999999999999999998777889999999
Q ss_pred CCCCc---EEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEE
Q 013179 109 TDIWQ---WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATM 185 (448)
Q Consensus 109 ~~t~~---W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~ 185 (448)
+.+++ |+.++ ++|.+|..|++++++ ++||++||..+....+++++||+.+++|++++ ++|.+|..|+++.
T Consensus 85 ~~~~~~~~W~~~~---~~p~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~ 157 (301)
T 2vpj_A 85 YTADEDGVWYSVA---PMNVRRGLAGATTLG-DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLG---DMQTAREGAGLVV 157 (301)
T ss_dssp TTCCTTCCCEEEC---CCSSCCBSCEEEEET-TEEEEECCBCSSCBCCEEEEEETTTTEEEEEE---ECSSCCBSCEEEE
T ss_pred CCCCCCCeeEECC---CCCCCccceeEEEEC-CEEEEEcccCCCcccceEEEEcCCCCeEEECC---CCCCCcccceEEE
Confidence 99999 99997 499999999999996 49999999988777899999999999999998 8899999999999
Q ss_pred eCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCcccccce
Q 013179 186 VEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIY 265 (448)
Q Consensus 186 ~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~ 265 (448)
++++||++||..... .++.++.||+++++|+.++ .+|.+|..|++++.+++|||+||.+.. ..
T Consensus 158 ~~~~iyv~GG~~~~~-------~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~-------~~ 220 (301)
T 2vpj_A 158 ASGVIYCLGGYDGLN-------ILNSVEKYDPHTGHWTNVT---PMATKRSGAGVALLNDHIYVVGGFDGT-------AH 220 (301)
T ss_dssp ETTEEEEECCBCSSC-------BCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBCSS-------SB
T ss_pred ECCEEEEECCCCCCc-------ccceEEEEeCCCCcEEeCC---CCCcccccceEEEECCEEEEEeCCCCC-------cc
Confidence 999999999987653 3566778899999999997 789999999999999999999998763 24
Q ss_pred eCcEEEEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEccCCCCCccCceEEecCCCCcccCceecCCCCC
Q 013179 266 YNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGKSTFGDIWWLVPEEDPIAKRYTESPPKV 340 (448)
Q Consensus 266 ~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~d~w~~~~~yd~~~~~w~~~~~~~ 340 (448)
.+++++||+.+++|+.++. .|.+|..|+++.++++|||+||.++...++++| .||+.+++|+..+..+
T Consensus 221 ~~~v~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~----~yd~~~~~W~~~~~~~ 288 (301)
T 2vpj_A 221 LSSVEAYNIRTDSWTTVTS---MTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIE----CYDPIIDSWEVVTSMG 288 (301)
T ss_dssp CCCEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEECCBCSSSBEEEEE----EEETTTTEEEEEEEEE
T ss_pred cceEEEEeCCCCcEEECCC---CCCcccceeEEEECCEEEEEcCcCCCcccccEE----EEcCCCCeEEEcCCCC
Confidence 7899999999999999976 466899999999999999999998776667766 4566789999875433
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.1e-44 Score=344.42 Aligned_cols=261 Identities=18% Similarity=0.298 Sum_probs=231.2
Q ss_pred cceEEeeeCCCCCCCCCCCCCcEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCccee
Q 013179 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHI 81 (448)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~ 81 (448)
.+|++++ .+|.+|.+|+++.++ ++||++||..+...++++++||+.+++|+.++ ++|.+|..|+
T Consensus 40 ~~W~~~~------~~p~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~ 103 (302)
T 2xn4_A 40 ERWHQVA------ELPSRRCRAGMVYMA-GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA---------NMRDRRSTLG 103 (302)
T ss_dssp TEEEEEC------CCSSCCBSCEEEEET-TEEEEESCBCSSSBCCCEEEEETTTTEEEEEC---------CCSSCCBSCE
T ss_pred CcEeEcc------cCCcccccceEEEEC-CEEEEEeCcCCCccccceEEECCCCCceeeCC---------CCCccccceE
Confidence 4688886 489999999999887 89999999987778899999999999999987 5789999999
Q ss_pred EEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCC--ccCCceEEEe
Q 013179 82 AVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGK--KWLSDVYVLD 159 (448)
Q Consensus 82 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~--~~~~~v~~yd 159 (448)
+++++++|||+||..+...++++++||+.+++|+.++ .+|.+|..|+++++++ +||++||.+.. ...+++++||
T Consensus 104 ~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~yd 179 (302)
T 2xn4_A 104 AAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA---PMNTRRSSVGVGVVGG-LLYAVGGYDVASRQCLSTVECYN 179 (302)
T ss_dssp EEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC---CCSSCCBSCEEEEETT-EEEEECCEETTTTEECCCEEEEE
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC---CCCCcccCceEEEECC-EEEEEeCCCCCCCccccEEEEEe
Confidence 9999999999999988777899999999999999997 4999999999999965 99999998755 3588999999
Q ss_pred CCCCceEeecCCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeE
Q 013179 160 TISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHT 239 (448)
Q Consensus 160 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~ 239 (448)
+.+++|+.++ ++|.+|..|+++.++++|||+||..... .++.++.||+++++|+.+. .+|.+|..|+
T Consensus 180 ~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~yd~~~~~W~~~~---~~~~~r~~~~ 246 (302)
T 2xn4_A 180 ATTNEWTYIA---EMSTRRSGAGVGVLNNLLYAVGGHDGPL-------VRKSVEVYDPTTNAWRQVA---DMNMCRRNAG 246 (302)
T ss_dssp TTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBSSSS-------BCCCEEEEETTTTEEEEEC---CCSSCCBSCE
T ss_pred CCCCcEEECC---CCccccccccEEEECCEEEEECCCCCCc-------ccceEEEEeCCCCCEeeCC---CCCCccccCe
Confidence 9999999998 8999999999999999999999987543 2466777899999999998 7889999999
Q ss_pred EEEeCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEECCEE
Q 013179 240 ITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLY 304 (448)
Q Consensus 240 ~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i 304 (448)
++..+++|||+||.+.. ..++++++||+++++|+.++.. .|.+|..|++++++++|
T Consensus 247 ~~~~~~~i~v~GG~~~~-------~~~~~v~~yd~~~~~W~~~~~~--~~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 247 VCAVNGLLYVVGGDDGS-------CNLASVEYYNPTTDKWTVVSSC--MSTGRSYAGVTVIDKRL 302 (302)
T ss_dssp EEEETTEEEEECCBCSS-------SBCCCEEEEETTTTEEEECSSC--CSSCCBSCEEEEEEC--
T ss_pred EEEECCEEEEECCcCCC-------cccccEEEEcCCCCeEEECCcc--cCcccccceEEEecccC
Confidence 99999999999998653 3578999999999999999732 46799999999998765
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3e-44 Score=342.56 Aligned_cols=256 Identities=19% Similarity=0.290 Sum_probs=229.8
Q ss_pred cceEEeeeCCCCCCCCCCCCCcEEEEECCcEEEEEcCC----CCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCC
Q 013179 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGL----VDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPR 77 (448)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~~~~~~~~~~~iyv~GG~----~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R 77 (448)
.+|+.++ ++|.+|.+|++++++ ++||++||. .+...++++++||+.+++|+.++ ++|.+|
T Consensus 49 ~~W~~~~------~~p~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~---------~~p~~r 112 (308)
T 1zgk_A 49 GTWLRLA------DLQVPRSGLAGCVVG-GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA---------PMSVPR 112 (308)
T ss_dssp TEEEECC------CCSSCCBSCEEEEET-TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECC---------CCSSCC
T ss_pred CeEeECC------CCCcccccceEEEEC-CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECC---------CCCcCc
Confidence 4799886 489999999999887 899999998 56677899999999999999986 578899
Q ss_pred cceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEE
Q 013179 78 AFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYV 157 (448)
Q Consensus 78 ~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~ 157 (448)
..|++++++++|||+||..+...++++++||+.+++|+.+++ +|.+|..|++++++ ++||++||.++....+++++
T Consensus 113 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~ 188 (308)
T 1zgk_A 113 NRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAP---MLTRRIGVGVAVLN-RLLYAVGGFDGTNRLNSAEC 188 (308)
T ss_dssp BTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCC---CSSCCBSCEEEEET-TEEEEECCBCSSCBCCCEEE
T ss_pred cccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCC---CCccccceEEEEEC-CEEEEEeCCCCCCcCceEEE
Confidence 999999999999999999887778999999999999999984 99999999999995 49999999988777899999
Q ss_pred EeCCCCceEeecCCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCce
Q 013179 158 LDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCG 237 (448)
Q Consensus 158 yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~ 237 (448)
||+.+++|+.++ ++|.+|..|+++.++++|||+||..... .++.++.||+++++|+.+. .+|.+|..
T Consensus 189 yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~v~~yd~~~~~W~~~~---~~p~~r~~ 255 (308)
T 1zgk_A 189 YYPERNEWRMIT---AMNTIRSGAGVCVLHNCIYAAGGYDGQD-------QLNSVERYDVETETWTFVA---PMKHRRSA 255 (308)
T ss_dssp EETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCSSS-------BCCCEEEEETTTTEEEECC---CCSSCCBS
T ss_pred EeCCCCeEeeCC---CCCCccccceEEEECCEEEEEeCCCCCC-------ccceEEEEeCCCCcEEECC---CCCCCccc
Confidence 999999999998 8999999999999999999999987543 2466777899999999998 78999999
Q ss_pred eEEEEeCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEE
Q 013179 238 HTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL 300 (448)
Q Consensus 238 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~ 300 (448)
|++++.+++|||+||.+.. ...+++++||+++++|++++.+ |.+|..|+++++
T Consensus 256 ~~~~~~~~~i~v~GG~~~~-------~~~~~v~~yd~~~~~W~~~~~~---p~~r~~~~~~~l 308 (308)
T 1zgk_A 256 LGITVHQGRIYVLGGYDGH-------TFLDSVECYDPDTDTWSEVTRM---TSGRSGVGVAVT 308 (308)
T ss_dssp CEEEEETTEEEEECCBCSS-------CBCCEEEEEETTTTEEEEEEEC---SSCCBSCEEEEC
T ss_pred eEEEEECCEEEEEcCcCCC-------cccceEEEEcCCCCEEeecCCC---CCCcccceeEeC
Confidence 9999999999999998753 3678999999999999999774 669999998864
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=7.5e-44 Score=339.35 Aligned_cols=257 Identities=18% Similarity=0.256 Sum_probs=229.6
Q ss_pred cceEEeeeCCCCCCCCCCCCCcEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCccee
Q 013179 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHI 81 (448)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~ 81 (448)
.+|+++++ +|.+|.+|++++++ ++||++||.. ...++++++||+.+++|+.++ ++|.+|.+|+
T Consensus 34 ~~W~~~~~------~p~~r~~~~~~~~~-~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~ 96 (306)
T 3ii7_A 34 YSWTDIRC------PFEKRRDAACVFWD-NVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKL---------GPPTPRDSLA 96 (306)
T ss_dssp TEEEECCC------CSCCCBSCEEEEET-TEEEEECCBS-SSBCCEEEEEETTTTEEEEEE---------CCSSCCBSCE
T ss_pred CCEecCCC------CCcccceeEEEEEC-CEEEEEeCCC-CCCcceEEEEeCCCCeEEECC---------CCCcccccee
Confidence 46998864 89999999999987 7899999997 678899999999999999987 5789999999
Q ss_pred EEEECCeEEEEcccC-CCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCcc----CCceE
Q 013179 82 AVAIDCHMFIFGGRF-GSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKW----LSDVY 156 (448)
Q Consensus 82 ~~~~~~~lyv~GG~~-~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~----~~~v~ 156 (448)
+++++++|||+||.+ +...++++++||+.+++|+.++ .+|.+|..|+++++++ +||++||...... .++++
T Consensus 97 ~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~ 172 (306)
T 3ii7_A 97 ACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP---SMLTQRCSHGMVEANG-LIYVCGGSLGNNVSGRVLNSCE 172 (306)
T ss_dssp EEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETT-EEEEECCEESCTTTCEECCCEE
T ss_pred EEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC---CCcCCcceeEEEEECC-EEEEECCCCCCCCcccccceEE
Confidence 999999999999998 5667899999999999999997 4999999999999865 9999999876654 89999
Q ss_pred EEeCCCCceEeecCCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCc
Q 013179 157 VLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRC 236 (448)
Q Consensus 157 ~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~ 236 (448)
+||+.+++|+.++ ++|.+|..|+++.++++|||+||..... .++.++.||+++++|+.+. .+|.+|.
T Consensus 173 ~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~-------~~~~~~~yd~~~~~W~~~~---~~p~~r~ 239 (306)
T 3ii7_A 173 VYDPATETWTELC---PMIEARKNHGLVFVKDKIFAVGGQNGLG-------GLDNVEYYDIKLNEWKMVS---PMPWKGV 239 (306)
T ss_dssp EEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEETTE-------EBCCEEEEETTTTEEEECC---CCSCCBS
T ss_pred EeCCCCCeEEECC---CccchhhcceEEEECCEEEEEeCCCCCC-------CCceEEEeeCCCCcEEECC---CCCCCcc
Confidence 9999999999998 8999999999999999999999986553 3567778899999999997 7899999
Q ss_pred eeEEEEeCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEECC
Q 013179 237 GHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGS 302 (448)
Q Consensus 237 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~ 302 (448)
.|++++.+++|||+||.+.. ...+++++||+++++|+.++.+ |.+|.+|+++++.+
T Consensus 240 ~~~~~~~~~~i~v~GG~~~~-------~~~~~~~~yd~~~~~W~~~~~~---~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 240 TVKCAAVGSIVYVLAGFQGV-------GRLGHILEYNTETDKWVANSKV---RAFPVTSCLICVVD 295 (306)
T ss_dssp CCEEEEETTEEEEEECBCSS-------SBCCEEEEEETTTTEEEEEEEE---ECCSCTTCEEEEEE
T ss_pred ceeEEEECCEEEEEeCcCCC-------eeeeeEEEEcCCCCeEEeCCCc---ccccceeEEEEECC
Confidence 99999999999999998753 3678999999999999999875 56899999887643
No 8
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=336.10 Aligned_cols=257 Identities=21% Similarity=0.322 Sum_probs=231.7
Q ss_pred cceEEeeeCCCCCCCCCCCCCcEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCc---EEeeeecCCCCCCCCCCCCCc
Q 013179 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKL---WFQPECTGNGSNGQVGPGPRA 78 (448)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~---W~~~~~~~~~~~~~~~p~~R~ 78 (448)
.+|+++++ +|.+|.+|+++.++ ++||++||..+...++++++||+.+++ |+.++ ++|.+|.
T Consensus 41 ~~W~~~~~------~p~~r~~~~~~~~~-~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~---------~~p~~r~ 104 (301)
T 2vpj_A 41 QEWSFLPS------ITRKRRYVASVSLH-DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVA---------PMNVRRG 104 (301)
T ss_dssp TEEEECCC------CSSCCBSCEEEEET-TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEEC---------CCSSCCB
T ss_pred CeEEeCCC------CChhhccccEEEEC-CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECC---------CCCCCcc
Confidence 47888863 88999999999988 789999999877788999999999999 99986 5788999
Q ss_pred ceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEE
Q 013179 79 FHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVL 158 (448)
Q Consensus 79 ~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 158 (448)
.|+++.++++||++||..+...++++++||+.+++|+.+++ +|.+|..|++++++ ++||++||.++....+++++|
T Consensus 105 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~ 180 (301)
T 2vpj_A 105 LAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGD---MQTAREGAGLVVAS-GVIYCLGGYDGLNILNSVEKY 180 (301)
T ss_dssp SCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE---CSSCCBSCEEEEET-TEEEEECCBCSSCBCCCEEEE
T ss_pred ceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCC---CCCCcccceEEEEC-CEEEEECCCCCCcccceEEEE
Confidence 99999999999999999887778999999999999999985 89999999999995 499999999887788999999
Q ss_pred eCCCCceEeecCCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCcee
Q 013179 159 DTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGH 238 (448)
Q Consensus 159 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~ 238 (448)
|+.+++|+.++ ++|.+|..|+++.++++|||+||..... .++.++.||+++++|+.+. .+|.+|..|
T Consensus 181 d~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~-------~~~~v~~yd~~~~~W~~~~---~~p~~r~~~ 247 (301)
T 2vpj_A 181 DPHTGHWTNVT---PMATKRSGAGVALLNDHIYVVGGFDGTA-------HLSSVEAYNIRTDSWTTVT---SMTTPRCYV 247 (301)
T ss_dssp ETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBCSSS-------BCCCEEEEETTTTEEEEEC---CCSSCCBSC
T ss_pred eCCCCcEEeCC---CCCcccccceEEEECCEEEEEeCCCCCc-------ccceEEEEeCCCCcEEECC---CCCCcccce
Confidence 99999999997 8999999999999999999999987654 2466777899999999997 789999999
Q ss_pred EEEEeCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEEC
Q 013179 239 TITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLG 301 (448)
Q Consensus 239 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~ 301 (448)
++++.+++|||+||.+.. ..++++++||+++++|+.++.+ |.+|..|+++.++
T Consensus 248 ~~~~~~~~i~v~GG~~~~-------~~~~~v~~yd~~~~~W~~~~~~---~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 248 GATVLRGRLYAIAGYDGN-------SLLSSIECYDPIIDSWEVVTSM---GTQRCDAGVCVLR 300 (301)
T ss_dssp EEEEETTEEEEECCBCSS-------SBEEEEEEEETTTTEEEEEEEE---EEEEESCEEEEEE
T ss_pred eEEEECCEEEEEcCcCCC-------cccccEEEEcCCCCeEEEcCCC---CcccccceEEEeC
Confidence 999999999999998653 3668999999999999999875 5689999998764
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=7.5e-44 Score=346.80 Aligned_cols=288 Identities=17% Similarity=0.198 Sum_probs=226.6
Q ss_pred CCCCCCCCcEEEEECCcEEEEEcCCCCCcccCceEEEEcC--CCcEEeeeecCCCCCCCCCC-CCCcceeEEEECCeEEE
Q 013179 15 TVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDID--NKLWFQPECTGNGSNGQVGP-GPRAFHIAVAIDCHMFI 91 (448)
Q Consensus 15 ~~P~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~~~~~~~~~~p-~~R~~h~~~~~~~~lyv 91 (448)
++|.+|.+|++++++ ++|||+||..+ +++++||+. +++|+.++ ++| .+|.+|++++++++|||
T Consensus 5 ~lP~~r~~~~~~~~~-~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~---------~~p~~~R~~~~~~~~~~~lyv 70 (357)
T 2uvk_A 5 ETPVPFKSGTGAIDN-DTVYIGLGSAG----TAWYKLDTQAKDKKWTALA---------AFPGGPRDQATSAFIDGNLYV 70 (357)
T ss_dssp CCSSCCCSCEEEEET-TEEEEECGGGT----TCEEEEETTSSSCCEEECC---------CCTTCCCBSCEEEEETTEEEE
T ss_pred CCCccccceEEEEEC-CEEEEEeCcCC----CeEEEEccccCCCCeeECC---------CCCCCcCccceEEEECCEEEE
Confidence 589999999998887 89999999753 489999998 48999986 467 79999999999999999
Q ss_pred Eccc-C----CCCCCCcEEEEECCCCcEEEeecCCCCC-CcCcccEEEEECCcEEEEEecCCCCc---------------
Q 013179 92 FGGR-F----GSRRLGDFWVLDTDIWQWSELTSFGDLP-SPRDFAAASAIGNRKIVMYGGWDGKK--------------- 150 (448)
Q Consensus 92 ~GG~-~----~~~~~~~~~~~d~~t~~W~~~~~~~~~p-~~r~~~~~~~~~~~~iyv~GG~~~~~--------------- 150 (448)
+||. . ....++++++||+.+++|+++++ ++ .+|..|++++.+ ++|||+||.+...
T Consensus 71 ~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~---~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~~~~~ 146 (357)
T 2uvk_A 71 FGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMS---HAPMGMAGHVTFVHN-GKAYVTGGVNQNIFNGYFEDLNEAGKDS 146 (357)
T ss_dssp ECCEEECTTSCEEECCCEEEEETTTTEEEECSC---CCSSCCSSEEEEEET-TEEEEEECCCHHHHHHHHHHHHHHTTCH
T ss_pred EcCCCCCCCccceeeccEEEEeCCCCcEEECCC---CCCcccccceEEEEC-CEEEEEeCcCCCcCcccccchhhcCCcc
Confidence 9998 3 23458899999999999999986 44 999999999975 4999999987542
Q ss_pred -------------------cCCceEEEeCCCCceEeecCCCCCCCccC-CceeEEeCCEEEEEcccCCCCCccCceeeec
Q 013179 151 -------------------WLSDVYVLDTISLEWMQLPVTGSVPPPRC-GHTATMVEKRLLIYGGRGGGGPIMGDLWALK 210 (448)
Q Consensus 151 -------------------~~~~v~~yd~~t~~W~~~~~~~~~p~~r~-~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~ 210 (448)
..+++++||+.+++|+.++ ++|.+|. +|+++.++++|||+||....+...++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~----- 218 (357)
T 2uvk_A 147 TAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAG---ESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDA----- 218 (357)
T ss_dssp HHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEE---ECSSCCCBSCEEEEETTEEEEECCEEETTEECCC-----
T ss_pred cchhhhhhhhccccccccCCcccEEEEeCCCCcEEECC---CCCCCCcccccEEEECCEEEEEeeecCCCcccCc-----
Confidence 4689999999999999997 7887655 49999999999999998655433344
Q ss_pred cccccc--CCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCc----------ccccceeCcEEEEEcCCCc
Q 013179 211 GLIEEE--NETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWL----------SRYDIYYNDTIILDRLSAQ 278 (448)
Q Consensus 211 ~~~~yd--~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~----------~~~~~~~~~v~~yd~~~~~ 278 (448)
++.|| +++++|+.+... ..|.+|..|++++.+++|||+||.+..+.. ......++++++||+.+++
T Consensus 219 -v~~~d~d~~~~~W~~~~~~-~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~ 296 (357)
T 2uvk_A 219 -VFELDFTGNNLKWNKLAPV-SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK 296 (357)
T ss_dssp -EEEEECC---CEEEECCCS-STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---
T ss_pred -eEEEEecCCCCcEEecCCC-CCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCc
Confidence 44445 599999998732 234456788899999999999997543200 0001235789999999999
Q ss_pred eEEeccCCCCCCCccceEEEEECCEEEEEccCCCCC-ccCceEEecCCCCcccCceecCC
Q 013179 279 WKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGKS-TFGDIWWLVPEEDPIAKRYTESP 337 (448)
Q Consensus 279 W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-~~~d~w~~~~~yd~~~~~w~~~~ 337 (448)
|+++..+ |.+|..|+++.++++|||+||.+... .++|+|.+... .++|.+..
T Consensus 297 W~~~~~~---p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~----~~~~~~~~ 349 (357)
T 2uvk_A 297 WDKSGEL---SQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVK----DNKVTVQN 349 (357)
T ss_dssp CEEEEEC---SSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-----CCSCEEEC
T ss_pred eeeCCCC---CCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEc----CcEeEeee
Confidence 9999774 66899999999999999999988654 46888866654 78887663
No 10
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=3.5e-44 Score=343.18 Aligned_cols=271 Identities=20% Similarity=0.234 Sum_probs=230.3
Q ss_pred cceEEeeeCCCCCCCCCCCCCcEEEEECCcEEEEEcCCC------CCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCC
Q 013179 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLV------DKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPG 75 (448)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~~~~~~~~~~~iyv~GG~~------~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~ 75 (448)
.+|+. ++ .+.|.+|.+|++++++ ++||++||.. .....+++++||+.+++|+.++ ++|.
T Consensus 23 ~~W~~-~~----~~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~---------~~p~ 87 (315)
T 4asc_A 23 NECYC-AS----LSSQVPKNHVSLVTKE-NQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP---------PLPS 87 (315)
T ss_dssp TEEEE-EE----CCCCSCSSEEEEECTT-CCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC---------CBSS
T ss_pred CeEec-CC----CCCCCCccceEEEEEC-CEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC---------CCCc
Confidence 46886 32 2346789999998876 7899999962 1234567999999999999986 5789
Q ss_pred CCcceeEEEECCeEEEEcccC---CCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecC-CCCcc
Q 013179 76 PRAFHIAVAIDCHMFIFGGRF---GSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGW-DGKKW 151 (448)
Q Consensus 76 ~R~~h~~~~~~~~lyv~GG~~---~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~-~~~~~ 151 (448)
+|.+|++++++++|||+||.+ +...++++++||+.+++|+++++ +|.+|..|+++++++ +|||+||. .....
T Consensus 88 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~ 163 (315)
T 4asc_A 88 PRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP---LPYVVYGHTVLSHMD-LVYVIGGKGSDRKC 163 (315)
T ss_dssp CEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEETT-EEEEECCBCTTSCB
T ss_pred chhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC---CCCcccceeEEEECC-EEEEEeCCCCCCcc
Confidence 999999999999999999975 35678999999999999999984 999999999999865 99999998 55567
Q ss_pred CCceEEEeCCCCceEeecCCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCC
Q 013179 152 LSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQA 231 (448)
Q Consensus 152 ~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~ 231 (448)
.+++++||+.+++|++++ ++|.+|..|+++.++++|||+||..... .++.++.||+++++|+.++ .+
T Consensus 164 ~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~yd~~~~~W~~~~---~~ 230 (315)
T 4asc_A 164 LNKMCVYDPKKFEWKELA---PMQTARSLFGATVHDGRIIVAAGVTDTG-------LTSSAEVYSITDNKWAPFE---AF 230 (315)
T ss_dssp CCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEEEEECSSS-------EEEEEEEEETTTTEEEEEC---CC
T ss_pred cceEEEEeCCCCeEEECC---CCCCchhceEEEEECCEEEEEeccCCCC-------ccceEEEEECCCCeEEECC---CC
Confidence 899999999999999998 8999999999999999999999987654 3577888899999999998 78
Q ss_pred CCCCceeEEEEeCCEEEEEcCCCCCCC--cccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEcc
Q 013179 232 PSSRCGHTITSGGHYLLLFGGHGTGGW--LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGG 309 (448)
Q Consensus 232 p~~r~~~~~~~~~~~i~v~GG~~~~~~--~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG 309 (448)
|.+|..|++++.+++|||+||.+.... -......++++|+||+++++|+++ +|.+|..|++++++++||++..
T Consensus 231 p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-----~~~~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 231 PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV-----LREIAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE-----ESCSSCCSSCEEEEEEECGGGS
T ss_pred CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh-----ccCCcCccceEEeCCEEEEEEe
Confidence 999999999999999999999753100 001124678999999999999999 3558999999999999999865
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=338.58 Aligned_cols=261 Identities=20% Similarity=0.333 Sum_probs=223.3
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccC----C--CCCCCcE
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRF----G--SRRLGDF 104 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~----~--~~~~~~~ 104 (448)
+.||++|| +++++||+.+++|+. +.. +.|.+|.+|++++++++|||+||.. . ....+++
T Consensus 5 ~~l~~~GG-------~~~~~yd~~~~~W~~-~~~-------~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ 69 (315)
T 4asc_A 5 DLIFMISE-------EGAVAYDPAANECYC-ASL-------SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYF 69 (315)
T ss_dssp EEEEEEET-------TEEEEEETTTTEEEE-EEC-------CCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEE
T ss_pred eEEEEEcC-------CceEEECCCCCeEec-CCC-------CCCCCccceEEEEECCEEEEEcCcccCCCCCccccccce
Confidence 67999999 679999999999987 322 3477999999999999999999962 1 2234569
Q ss_pred EEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCC---CCccCCceEEEeCCCCceEeecCCCCCCCccCCc
Q 013179 105 WVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWD---GKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH 181 (448)
Q Consensus 105 ~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~---~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~ 181 (448)
++||+.+++|+.++ ++|.+|..|+++++++ +|||+||.+ +....+++++||+.+++|++++ ++|.+|..|
T Consensus 70 ~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~ 142 (315)
T 4asc_A 70 LQFDHLDSEWLGMP---PLPSPRCLFGLGEALN-SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD---PLPYVVYGH 142 (315)
T ss_dssp EEEETTTTEEEECC---CBSSCEESCEEEEETT-EEEEECCEESSTTCCBCCCEEEEETTTTEEEECC---CCSSCCBSC
T ss_pred EEecCCCCeEEECC---CCCcchhceeEEEECC-EEEEEeCCcCCCCCcccceEEEECCCCCcEeECC---CCCCcccce
Confidence 99999999999997 4999999999999965 999999975 3567899999999999999998 899999999
Q ss_pred eeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCccc
Q 013179 182 TATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSR 261 (448)
Q Consensus 182 ~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~ 261 (448)
+++.++++|||+||....... +++++.||+.+++|+.++ .+|.+|..|++++.+++|||+||.+..
T Consensus 143 ~~~~~~~~iyv~GG~~~~~~~------~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~----- 208 (315)
T 4asc_A 143 TVLSHMDLVYVIGGKGSDRKC------LNKMCVYDPKKFEWKELA---PMQTARSLFGATVHDGRIIVAAGVTDT----- 208 (315)
T ss_dssp EEEEETTEEEEECCBCTTSCB------CCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEEEEECSS-----
T ss_pred eEEEECCEEEEEeCCCCCCcc------cceEEEEeCCCCeEEECC---CCCCchhceEEEEECCEEEEEeccCCC-----
Confidence 999999999999998544433 456667799999999998 789999999999999999999998763
Q ss_pred ccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEccCCCC---------CccCceEEecCCCCcccCc
Q 013179 262 YDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK---------STFGDIWWLVPEEDPIAKR 332 (448)
Q Consensus 262 ~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~---------~~~~d~w~~~~~yd~~~~~ 332 (448)
..++++++||+.+++|+.+++ .|.+|..|+++.++++|||+||.+.. ..++++| .||+.+++
T Consensus 209 --~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~----~yd~~~~~ 279 (315)
T 4asc_A 209 --GLTSSAEVYSITDNKWAPFEA---FPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIW----RYNEEEKK 279 (315)
T ss_dssp --SEEEEEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEE----EEETTTTE
T ss_pred --CccceEEEEECCCCeEEECCC---CCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEE----EecCCCCh
Confidence 367899999999999999976 46789999999999999999998532 2345655 56777999
Q ss_pred eecC
Q 013179 333 YTES 336 (448)
Q Consensus 333 w~~~ 336 (448)
|+..
T Consensus 280 W~~~ 283 (315)
T 4asc_A 280 WEGV 283 (315)
T ss_dssp EEEE
T ss_pred hhhh
Confidence 9987
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.6e-43 Score=337.53 Aligned_cols=270 Identities=20% Similarity=0.262 Sum_probs=227.6
Q ss_pred cceEEeeeCCCCCCCCCCCCCcEEEEECCcEEEEEcCCCC---C---cccCceEEEEcCCCcEEeeeecCCCCCCCCCCC
Q 013179 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLVD---K---RFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPG 75 (448)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~~~~~~~~~~~iyv~GG~~~---~---~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~ 75 (448)
.+|...+. +.|.+|.+|+++.++ ++||++||... . ...+++++||+.+++|+.++ ++|.
T Consensus 34 ~~W~~~~~-----~~~~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~---------~~p~ 98 (318)
T 2woz_A 34 NECYLTAL-----AEQIPRNHSSIVTQQ-NQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP---------PLPS 98 (318)
T ss_dssp TEEEEEEE-----CTTSCSSEEEEECSS-SCEEEEESSCC-------CCCBEEEEEETTTTEEEECS---------CBSS
T ss_pred CceecccC-----CccCCccceEEEEEC-CEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC---------CCCc
Confidence 46887432 356789999888776 78999999631 1 22345999999999999986 5788
Q ss_pred CCcceeEEEECCeEEEEcccC--CCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCC-CCccC
Q 013179 76 PRAFHIAVAIDCHMFIFGGRF--GSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWD-GKKWL 152 (448)
Q Consensus 76 ~R~~h~~~~~~~~lyv~GG~~--~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~-~~~~~ 152 (448)
+|..|++++++++|||+||.. +...++++++||+.+++|++++ ++|.+|..|+++++++ +||++||.. .....
T Consensus 99 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~ 174 (318)
T 2woz_A 99 ARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK---NLPIKVYGHNVISHNG-MIYCLGGKTDDKKCT 174 (318)
T ss_dssp CBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC---CCSSCEESCEEEEETT-EEEEECCEESSSCBC
T ss_pred cccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC---CCCCcccccEEEEECC-EEEEEcCCCCCCCcc
Confidence 999999999999999999986 4566889999999999999998 4999999999999854 999999985 34568
Q ss_pred CceEEEeCCCCceEeecCCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCC
Q 013179 153 SDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAP 232 (448)
Q Consensus 153 ~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p 232 (448)
+++++||+.+++|++++ ++|.+|..|+++.++++|||+||..... .++.++.||+++++|+.+. .+|
T Consensus 175 ~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~yd~~~~~W~~~~---~~p 241 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLA---PMKTPRSMFGVAIHKGKIVIAGGVTEDG-------LSASVEAFDLKTNKWEVMT---EFP 241 (318)
T ss_dssp CCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEEEEEETTE-------EEEEEEEEETTTCCEEECC---CCS
T ss_pred ceEEEEcCCCCEEEECC---CCCCCcccceEEEECCEEEEEcCcCCCC-------ccceEEEEECCCCeEEECC---CCC
Confidence 89999999999999998 8999999999999999999999987543 3577888899999999997 789
Q ss_pred CCCceeEEEEeCCEEEEEcCCCCCCCcc--cccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEc
Q 013179 233 SSRCGHTITSGGHYLLLFGGHGTGGWLS--RYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFG 308 (448)
Q Consensus 233 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~--~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~G 308 (448)
.+|..|++++.+++|||+||.+...... ......+++|+||+++++|+++ .|.+|..|+++.++++|||+.
T Consensus 242 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-----~~~~r~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 242 QERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM-----LKEIRYASGASCLATRLNLFK 314 (318)
T ss_dssp SCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE-----ESCCGGGTTCEEEEEEEEGGG
T ss_pred CcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh-----cccccccccceeeCCEEEEEE
Confidence 9999999999999999999986421000 0013578999999999999999 356899999999999999975
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1e-42 Score=333.43 Aligned_cols=270 Identities=19% Similarity=0.317 Sum_probs=227.7
Q ss_pred CCCCCcEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCC
Q 013179 18 QPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFG 97 (448)
Q Consensus 18 ~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~ 97 (448)
.+|.++..- +.||++||. ++++||+.+++|...+. +.|.+|.+|+++..+++|||+||...
T Consensus 7 ~~r~~~~~~----~~i~~~GG~-------~~~~yd~~~~~W~~~~~--------~~~~~r~~~~~~~~~~~lyv~GG~~~ 67 (318)
T 2woz_A 7 IPRHGMFVK----DLILLVNDT-------AAVAYDPMENECYLTAL--------AEQIPRNHSSIVTQQNQVYVVGGLYV 67 (318)
T ss_dssp SCCCCCSEE----EEEEEECSS-------EEEEEETTTTEEEEEEE--------CTTSCSSEEEEECSSSCEEEEESSCC
T ss_pred cccccceec----chhhhcccc-------ceEEECCCCCceecccC--------CccCCccceEEEEECCEEEEECCccc
Confidence 466665442 789999994 48999999999988542 24689999999999999999999631
Q ss_pred ------CCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCC--CCccCCceEEEeCCCCceEeec
Q 013179 98 ------SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWD--GKKWLSDVYVLDTISLEWMQLP 169 (448)
Q Consensus 98 ------~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~--~~~~~~~v~~yd~~t~~W~~~~ 169 (448)
....+++++||+.+++|++++ ++|.+|..|+++++++ +|||+||.. .....+++++||+.+++|++++
T Consensus 68 ~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~ 143 (318)
T 2woz_A 68 DEENKDQPLQSYFFQLDNVSSEWVGLP---PLPSARCLFGLGEVDD-KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK 143 (318)
T ss_dssp -------CCCBEEEEEETTTTEEEECS---CBSSCBCSCEEEEETT-EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC
T ss_pred CccccCCCccccEEEEeCCCCcEEECC---CCCccccccceEEECC-EEEEEcCccCCCCcccceEEEEeCCCCCEeECC
Confidence 122345999999999999997 4999999999999965 999999986 4456889999999999999998
Q ss_pred CCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEE
Q 013179 170 VTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLL 249 (448)
Q Consensus 170 ~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v 249 (448)
++|.+|.+|+++.++++|||+||....... +++++.||+.+++|+.++ .+|.+|..|++++.+++|||
T Consensus 144 ---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~------~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv 211 (318)
T 2woz_A 144 ---NLPIKVYGHNVISHNGMIYCLGGKTDDKKC------TNRVFIYNPKKGDWKDLA---PMKTPRSMFGVAIHKGKIVI 211 (318)
T ss_dssp ---CCSSCEESCEEEEETTEEEEECCEESSSCB------CCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEE
T ss_pred ---CCCCcccccEEEEECCEEEEEcCCCCCCCc------cceEEEEcCCCCEEEECC---CCCCCcccceEEEECCEEEE
Confidence 899999999999999999999998654433 455667799999999998 78999999999999999999
Q ss_pred EcCCCCCCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEccCCCC---------CccCceE
Q 013179 250 FGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK---------STFGDIW 320 (448)
Q Consensus 250 ~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~---------~~~~d~w 320 (448)
+||.+.. ...+++++||+++++|+.++. .|.+|..|+++.++++|||+||.+.. ...+++|
T Consensus 212 ~GG~~~~-------~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~ 281 (318)
T 2woz_A 212 AGGVTED-------GLSASVEAFDLKTNKWEVMTE---FPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIW 281 (318)
T ss_dssp EEEEETT-------EEEEEEEEEETTTCCEEECCC---CSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEE
T ss_pred EcCcCCC-------CccceEEEEECCCCeEEECCC---CCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEE
Confidence 9998753 367899999999999999977 46689999999999999999998752 3467876
Q ss_pred EecCCCCcccCceecC
Q 013179 321 WLVPEEDPIAKRYTES 336 (448)
Q Consensus 321 ~~~~~yd~~~~~w~~~ 336 (448)
.||+.+++|+..
T Consensus 282 ----~yd~~~~~W~~~ 293 (318)
T 2woz_A 282 ----KYEDDKKEWAGM 293 (318)
T ss_dssp ----EEETTTTEEEEE
T ss_pred ----EEeCCCCEehhh
Confidence 456679999987
No 14
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=5.4e-40 Score=345.25 Aligned_cols=285 Identities=18% Similarity=0.195 Sum_probs=229.1
Q ss_pred CCCCCCCCcEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeee-ecCCCCCCCCCCCCCcceeEEEE--CCeEEE
Q 013179 15 TVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPE-CTGNGSNGQVGPGPRAFHIAVAI--DCHMFI 91 (448)
Q Consensus 15 ~~P~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv 91 (448)
..|.+|.+|+++ ++ ++||++||..+ ..++++++||+.+++|+.++ ..+. ..+|.+|.+|+++++ +++|||
T Consensus 384 ~~p~rr~g~~~~-~~-~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~----~~~p~~R~~hs~~~~~~~~~lyv 456 (695)
T 2zwa_A 384 CPINRKFGDVDV-AG-NDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSS----SEVPVARMCHTFTTISRNNQLLL 456 (695)
T ss_dssp CTTCCBSCEEEE-CS-SCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCC----SCCCCCCBSCEEEEETTTTEEEE
T ss_pred CCCCCceeEEEE-EC-CEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCC----CCCCccccceEEEEEccCCEEEE
Confidence 356777776554 55 78999999977 78899999999999999987 3211 147999999999999 999999
Q ss_pred EcccCCCC-CCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecC
Q 013179 92 FGGRFGSR-RLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPV 170 (448)
Q Consensus 92 ~GG~~~~~-~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~ 170 (448)
+||..... .++++|+||+.+++|+.++ ++|.+|..|+++++.+++|||+||.+... ++++||+.+++|+.+++
T Consensus 457 ~GG~~~~~~~~~dv~~yd~~t~~W~~~~---~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 457 IGGRKAPHQGLSDNWIFDMKTREWSMIK---SLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTP 530 (695)
T ss_dssp ECCBSSTTCBCCCCEEEETTTTEEEECC---CCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCC
T ss_pred EcCCCCCCCccccEEEEeCCCCcEEECC---CCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccC
Confidence 99998744 7899999999999999997 49999999999997456999999987665 89999999999999997
Q ss_pred CCCCCCccCCceeEEeC---CEEEEEcccCCCC-CccCceeeecccccccCCCCc------eEEecCCCCCCCCCceeEE
Q 013179 171 TGSVPPPRCGHTATMVE---KRLLIYGGRGGGG-PIMGDLWALKGLIEEENETPG------WTQLKLPGQAPSSRCGHTI 240 (448)
Q Consensus 171 ~~~~p~~r~~~~~~~~~---~~lyv~GG~~~~~-~~~~d~~~~~~~~~yd~~~~~------W~~~~~~g~~p~~r~~~~~ 240 (448)
.+.+|.+|.+|+++.++ ++|||+||....+ . .++.++.||+.+++ |+.+.. .++.+|.+|++
T Consensus 531 ~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~------~~~~v~~yd~~~~~w~~~~~W~~~~~--~p~~~R~~~~~ 602 (695)
T 2zwa_A 531 KDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTT------VSDKAIIFKYDAENATEPITVIKKLQ--HPLFQRYGSQI 602 (695)
T ss_dssp SSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSC------BCCEEEEEEECTTCSSCCEEEEEEEE--CGGGCCBSCEE
T ss_pred CCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCe------eeCcEEEEEccCCccccceEEEEcCC--CCCCCcccceE
Confidence 76799999999988876 8999999986543 2 24566777999999 888873 23689999999
Q ss_pred EEeC-CEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEeccCCC----CCCCccceEEEEECC-EEEEEccCCCCC
Q 013179 241 TSGG-HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNE----PPPARAYHSMTCLGS-LYLLFGGFDGKS 314 (448)
Q Consensus 241 ~~~~-~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~----~p~~r~~~~~~~~~~-~i~v~GG~~~~~ 314 (448)
++.+ ++|||+||.+.... ....+++++||+.+++|+.+..... ++..+.+|+++.+++ +|||+||.....
T Consensus 603 ~~~~~~~iyv~GG~~~~~~----~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cf 678 (695)
T 2zwa_A 603 KYITPRKLLIVGGTSPSGL----FDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGATCY 678 (695)
T ss_dssp EEEETTEEEEECCBCSSCC----CCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEEECT
T ss_pred EEeCCCEEEEECCccCCCC----CCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCCccCc
Confidence 9998 99999999865321 1357899999999999996543211 123678899998876 999999976543
Q ss_pred c----cCceEEecC
Q 013179 315 T----FGDIWWLVP 324 (448)
Q Consensus 315 ~----~~d~w~~~~ 324 (448)
. ++++|.+++
T Consensus 679 sfGt~~n~i~~ldl 692 (695)
T 2zwa_A 679 GFGSVTNVGLKLIA 692 (695)
T ss_dssp TSCEEECCCEEEEE
T ss_pred CccccccceEEEEE
Confidence 3 455565543
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.2e-37 Score=302.88 Aligned_cols=253 Identities=21% Similarity=0.283 Sum_probs=201.2
Q ss_pred cceEEeeeCCCCCCCC-CCCCCcEEEEECCcEEEEEcCC-C----CCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCC
Q 013179 2 HYWVRASSSDFGGTVP-QPRSGHSAVNIGKSKVVVFGGL-V----DKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPG 75 (448)
Q Consensus 2 ~~W~~~~~~~~~g~~P-~~R~~~~~~~~~~~~iyv~GG~-~----~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~ 75 (448)
.+|+++++ +| .+|.+|++++++ ++||||||. . ....++++++||+.+++|+.++.. .|.
T Consensus 43 ~~W~~~~~------~p~~~R~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~--------~p~ 107 (357)
T 2uvk_A 43 KKWTALAA------FPGGPRDQATSAFID-GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSH--------APM 107 (357)
T ss_dssp CCEEECCC------CTTCCCBSCEEEEET-TEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCC--------CSS
T ss_pred CCeeECCC------CCCCcCccceEEEEC-CEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCC--------CCc
Confidence 57998874 88 799999999998 799999998 3 245789999999999999998742 258
Q ss_pred CCcceeEEEECCeEEEEcccCCC----------------------------------CCCCcEEEEECCCCcEEEeecCC
Q 013179 76 PRAFHIAVAIDCHMFIFGGRFGS----------------------------------RRLGDFWVLDTDIWQWSELTSFG 121 (448)
Q Consensus 76 ~R~~h~~~~~~~~lyv~GG~~~~----------------------------------~~~~~~~~~d~~t~~W~~~~~~~ 121 (448)
+|.+|++++.+++|||+||.+.. ..++++++||+.+++|+.+.+
T Consensus 108 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~-- 185 (357)
T 2uvk_A 108 GMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGE-- 185 (357)
T ss_dssp CCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEE--
T ss_pred ccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCC--
Confidence 99999999999999999998643 246899999999999999975
Q ss_pred CCCCcCcc-cEEEEECCcEEEEEecCCCC-ccCCceEEEeC--CCCceEeecCCCCCCCc--cCCceeEEeCCEEEEEcc
Q 013179 122 DLPSPRDF-AAASAIGNRKIVMYGGWDGK-KWLSDVYVLDT--ISLEWMQLPVTGSVPPP--RCGHTATMVEKRLLIYGG 195 (448)
Q Consensus 122 ~~p~~r~~-~~~~~~~~~~iyv~GG~~~~-~~~~~v~~yd~--~t~~W~~~~~~~~~p~~--r~~~~~~~~~~~lyv~GG 195 (448)
+|.+|.. |+++++++ +|||+||.+.. ...++++.||+ .+++|+.++ ++|.+ |..|+++.++++|||+||
T Consensus 186 -~p~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~---~~~~~~~~~~~~~~~~~~~iyv~GG 260 (357)
T 2uvk_A 186 -SPWYGTAGAAVVNKGD-KTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLA---PVSSPDGVAGGFAGISNDSLIFAGG 260 (357)
T ss_dssp -CSSCCCBSCEEEEETT-EEEEECCEEETTEECCCEEEEECC---CEEEECC---CSSTTTCCBSCEEEEETTEEEEECC
T ss_pred -CCCCCcccccEEEECC-EEEEEeeecCCCcccCceEEEEecCCCCcEEecC---CCCCCcccccceEEEECCEEEEEcC
Confidence 8876555 88888865 99999997644 35788999986 899999997 55544 668889999999999999
Q ss_pred cCCCCCc----------cCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCcccccce
Q 013179 196 RGGGGPI----------MGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIY 265 (448)
Q Consensus 196 ~~~~~~~----------~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~ 265 (448)
....+.. ....-.++.+++||+++++|+.+. .+|.+|..|++++.+++|||+||.+..+ ..
T Consensus 261 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~------~~ 331 (357)
T 2uvk_A 261 AGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG---ELSQGRAYGVSLPWNNSLLIIGGETAGG------KA 331 (357)
T ss_dssp EECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE---ECSSCCBSSEEEEETTEEEEEEEECGGG------CE
T ss_pred ccccCCcccccccceeccccccceeeEEEEecCCCceeeCC---CCCCCcccceeEEeCCEEEEEeeeCCCC------CE
Confidence 7543210 111113467788999999999997 7899999999999999999999987642 35
Q ss_pred eCcEEEEEcCCCceEEeccC
Q 013179 266 YNDTIILDRLSAQWKRLPIG 285 (448)
Q Consensus 266 ~~~v~~yd~~~~~W~~~~~~ 285 (448)
++++++|++++++|.+..+.
T Consensus 332 ~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 332 VTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp EEEEEEEEC-CCSCEEEC--
T ss_pred eeeEEEEEEcCcEeEeeecc
Confidence 79999999999999998664
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=2.7e-35 Score=309.58 Aligned_cols=239 Identities=17% Similarity=0.205 Sum_probs=203.3
Q ss_pred CCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEee-c--CCCCCCcCcccEEEEEC-CcEEEEEecCC
Q 013179 72 VGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELT-S--FGDLPSPRDFAAASAIG-NRKIVMYGGWD 147 (448)
Q Consensus 72 ~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~-~--~~~~p~~r~~~~~~~~~-~~~iyv~GG~~ 147 (448)
..|.+|++|+++ ++++|||+||... ..++++++||+.+++|+.++ + .+.+|.+|..|+++++. +++|||+||.+
T Consensus 384 ~~p~rr~g~~~~-~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~ 461 (695)
T 2zwa_A 384 CPINRKFGDVDV-AGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRK 461 (695)
T ss_dssp CTTCCBSCEEEE-CSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBS
T ss_pred CCCCCceeEEEE-ECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCC
Confidence 356677766554 8999999999987 77899999999999999998 4 35689999999999994 45999999988
Q ss_pred CCc-cCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEe
Q 013179 148 GKK-WLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQL 225 (448)
Q Consensus 148 ~~~-~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~ 225 (448)
... .++++++||+.+++|+.++ ++|.+|.+|+++.+ +++|||+||..... .++.||+.+++|+.+
T Consensus 462 ~~~~~~~dv~~yd~~t~~W~~~~---~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----------~v~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 462 APHQGLSDNWIFDMKTREWSMIK---SLSHTRFRHSACSLPDGNVLILGGVTEGP----------AMLLYNVTEEIFKDV 528 (695)
T ss_dssp STTCBCCCCEEEETTTTEEEECC---CCSBCCBSCEEEECTTSCEEEECCBCSSC----------SEEEEETTTTEEEEC
T ss_pred CCCCccccEEEEeCCCCcEEECC---CCCCCcccceEEEEcCCEEEEECCCCCCC----------CEEEEECCCCceEEc
Confidence 654 7899999999999999998 89999999999997 99999999986543 566779999999999
Q ss_pred cCCCCCCCCCceeEEEEeC---CEEEEEcCCCCCCCcccccceeCcEEEEEcCCCc------eEEeccCCCCCCCccceE
Q 013179 226 KLPGQAPSSRCGHTITSGG---HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ------WKRLPIGNEPPPARAYHS 296 (448)
Q Consensus 226 ~~~g~~p~~r~~~~~~~~~---~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~------W~~~~~~~~~p~~r~~~~ 296 (448)
...+.+|.+|.+|++++++ ++|||+||...++ ...++++|+||+.+++ |+.+..+ ++.+|.+|+
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~-----~~~~~~v~~yd~~~~~w~~~~~W~~~~~~--p~~~R~~~~ 601 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQ-----TTVSDKAIIFKYDAENATEPITVIKKLQH--PLFQRYGSQ 601 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTS-----SCBCCEEEEEEECTTCSSCCEEEEEEEEC--GGGCCBSCE
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCC-----CeeeCcEEEEEccCCccccceEEEEcCCC--CCCCcccce
Confidence 9777789999999977766 8999999986543 2467999999999999 8988774 457899999
Q ss_pred EEEEC-CEEEEEccCCCCC---ccCceEEecCCCCcccCceecC
Q 013179 297 MTCLG-SLYLLFGGFDGKS---TFGDIWWLVPEEDPIAKRYTES 336 (448)
Q Consensus 297 ~~~~~-~~i~v~GG~~~~~---~~~d~w~~~~~yd~~~~~w~~~ 336 (448)
++.++ ++|||+||.+... ..+++| .||+.+++|+..
T Consensus 602 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~----~yd~~t~~W~~~ 641 (695)
T 2zwa_A 602 IKYITPRKLLIVGGTSPSGLFDRTNSII----SLDPLSETLTSI 641 (695)
T ss_dssp EEEEETTEEEEECCBCSSCCCCTTTSEE----EEETTTTEEEEC
T ss_pred EEEeCCCEEEEECCccCCCCCCCCCeEE----EEECCCCeEEEe
Confidence 99999 9999999987553 467766 566678999954
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=2.5e-34 Score=301.67 Aligned_cols=306 Identities=12% Similarity=0.105 Sum_probs=223.0
Q ss_pred cceEEeeeCCCCCCCCCCCCCcEEEEEC-CcEEEEEcCCCCCc------ccCceEEEEcCCCcEEeeeecCCCCCCCCCC
Q 013179 2 HYWVRASSSDFGGTVPQPRSGHSAVNIG-KSKVVVFGGLVDKR------FLSDVVVYDIDNKLWFQPECTGNGSNGQVGP 74 (448)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~~~~~~~~-~~~iyv~GG~~~~~------~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p 74 (448)
.+|+.+++ .||.+|+++++. +++||++||.+... ..+++++||+.+++|+.++. +|
T Consensus 176 ~~W~~~~~--------~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~---------~~ 238 (656)
T 1k3i_A 176 GRWGPTID--------LPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTV---------TV 238 (656)
T ss_dssp CEEEEEEE--------CSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEE---------EE
T ss_pred Ceeeeecc--------CCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcc---------cC
Confidence 36888765 455777777773 69999999986432 34579999999999998874 45
Q ss_pred CCCcce--eEEE-ECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEec-CCCCc
Q 013179 75 GPRAFH--IAVA-IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGG-WDGKK 150 (448)
Q Consensus 75 ~~R~~h--~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG-~~~~~ 150 (448)
.+|..| ++++ .+++||++||.... ++++||+.+++|++++ +||.+|..|+++++.+++|||+|| .++..
T Consensus 239 ~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~---~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~ 311 (656)
T 1k3i_A 239 TKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGP---DMQVARGYQSSATMSDGRVFTIGGSWSGGV 311 (656)
T ss_dssp CSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECC---CCSSCCSSCEEEECTTSCEEEECCCCCSSS
T ss_pred CCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECC---CCCccccccceEEecCCeEEEEeCcccCCc
Confidence 556544 3443 58999999997653 7999999999999997 599999999999985669999999 45566
Q ss_pred cCCceEEEeCCCCceEeecCCC--CCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCC
Q 013179 151 WLSDVYVLDTISLEWMQLPVTG--SVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLP 228 (448)
Q Consensus 151 ~~~~v~~yd~~t~~W~~~~~~~--~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~ 228 (448)
..+++++||+.+++|+.++..+ +++..|. ++++..++++|++||.++..... ...+.++.||++++.|......
T Consensus 312 ~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~---~~~~~v~~yd~~~~~w~~~~~~ 387 (656)
T 1k3i_A 312 FEKNGEVYSPSSKTWTSLPNAKVNPMLTADK-QGLYRSDNHAWLFGWKKGSVFQA---GPSTAMNWYYTSGSGDVKSAGK 387 (656)
T ss_dssp CCCCEEEEETTTTEEEEETTSCSGGGCCCCT-TGGGTTTCSCCEEECGGGCEEEC---CSSSEEEEEECSTTCEEEEEEE
T ss_pred ccccceEeCCCCCcceeCCCccccccccccc-cceeecCCceEEEECCCCcEEEe---cCccceeeeecCCcceeecCCc
Confidence 7889999999999999985322 4444544 35556799999999986431100 0236678899999999764321
Q ss_pred CCC----CCCCceeEEEE---eCCEEEEEcCCCCCCCcccccceeC---cEEEEEcCCCceEEeccCCCCCCCccceEEE
Q 013179 229 GQA----PSSRCGHTITS---GGHYLLLFGGHGTGGWLSRYDIYYN---DTIILDRLSAQWKRLPIGNEPPPARAYHSMT 298 (448)
Q Consensus 229 g~~----p~~r~~~~~~~---~~~~i~v~GG~~~~~~~~~~~~~~~---~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~ 298 (448)
... +.++..+++++ .+++|||+||...... ...++ ++++||+.+++|..+.. ...|.+|..|+++
T Consensus 388 ~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~----~~~~~~~~~v~~yd~~~~~W~~~~~-~~mp~~R~~~~~~ 462 (656)
T 1k3i_A 388 RQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD----SDATTNAHIITLGEPGTSPNTVFAS-NGLYFARTFHTSV 462 (656)
T ss_dssp CEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS----SBCCCCEEEEECCSTTSCCEEEECT-TCCSSCCBSCEEE
T ss_pred cccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC----CCcCCcceEEEcCCCCCCCeeEEcc-CCCCCCcccCCeE
Confidence 111 12344455553 5899999999753110 12334 78999999999999872 2247799999998
Q ss_pred EE-CCEEEEEccCCCC------CccCceEEecCCCCcccCceecCCCCCCCCC
Q 013179 299 CL-GSLYLLFGGFDGK------STFGDIWWLVPEEDPIAKRYTESPPKVLPEN 344 (448)
Q Consensus 299 ~~-~~~i~v~GG~~~~------~~~~d~w~~~~~yd~~~~~w~~~~~~~~~~~ 344 (448)
++ +++|||+||.+.. ..+++ .+.||+.+++|+.....+.++.
T Consensus 463 ~l~~g~i~v~GG~~~~~~~~~~~~~~~----v~~ydp~t~~W~~~~~~~~~R~ 511 (656)
T 1k3i_A 463 VLPDGSTFITGGQRRGIPFEDSTPVFT----PEIYVPEQDTFYKQNPNSIVRV 511 (656)
T ss_dssp ECTTSCEEEECCBSBCCTTCCCSBCCC----CEEEEGGGTEEEECCCCSSCCC
T ss_pred ECCCCCEEEECCcccCcCcCCCCcccc----eEEEcCCCCceeecCCCCCccc
Confidence 88 8999999997632 23455 3467888999999876665554
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=4.3e-33 Score=292.20 Aligned_cols=281 Identities=16% Similarity=0.100 Sum_probs=210.0
Q ss_pred cceEEeeeCCCCCCCCCCCCCcE--EEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcc
Q 013179 2 HYWVRASSSDFGGTVPQPRSGHS--AVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAF 79 (448)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~ 79 (448)
.+|+++++ +|.+|..|+ ++++.+++||++||..+. ++++||+.+++|+.++ ++|.+|.+
T Consensus 229 ~~w~~~~~------~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~---------~~~~~R~~ 289 (656)
T 1k3i_A 229 GIVSDRTV------TVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGP---------DMQVARGY 289 (656)
T ss_dssp CCBCCCEE------EECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECC---------CCSSCCSS
T ss_pred CcEEeCcc------cCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECC---------CCCccccc
Confidence 35766654 667776654 555666899999998543 7999999999999986 57899999
Q ss_pred eeEEEE-CCeEEEEcc-cCCCCCCCcEEEEECCCCcEEEeecCC--CCCCcCcccEEEEECCcEEEEEecCCCCc----c
Q 013179 80 HIAVAI-DCHMFIFGG-RFGSRRLGDFWVLDTDIWQWSELTSFG--DLPSPRDFAAASAIGNRKIVMYGGWDGKK----W 151 (448)
Q Consensus 80 h~~~~~-~~~lyv~GG-~~~~~~~~~~~~~d~~t~~W~~~~~~~--~~p~~r~~~~~~~~~~~~iyv~GG~~~~~----~ 151 (448)
|+++++ +++|||+|| .++...++++++||+.+++|+.++..+ .++..|.. ++...++++|++||.++.. .
T Consensus 290 ~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~--~~~~~~~~iyv~Gg~~g~~~~~~~ 367 (656)
T 1k3i_A 290 QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ--GLYRSDNHAWLFGWKKGSVFQAGP 367 (656)
T ss_dssp CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT--GGGTTTCSCCEEECGGGCEEECCS
T ss_pred cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc--ceeecCCceEEEECCCCcEEEecC
Confidence 999999 999999999 455667889999999999999985321 24555442 3333355999999987542 4
Q ss_pred CCceEEEeCCCCceEeecCCCCC----CCccCCceeEE---eCCEEEEEcccCCCC--CccCceeeecccccccCCCCce
Q 013179 152 LSDVYVLDTISLEWMQLPVTGSV----PPPRCGHTATM---VEKRLLIYGGRGGGG--PIMGDLWALKGLIEEENETPGW 222 (448)
Q Consensus 152 ~~~v~~yd~~t~~W~~~~~~~~~----p~~r~~~~~~~---~~~~lyv~GG~~~~~--~~~~d~~~~~~~~~yd~~~~~W 222 (448)
.++++.||+.+++|......... +.++..+++++ .+++||++||..... ...++ ...++.||+++++|
T Consensus 368 ~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~---~~~v~~yd~~~~~W 444 (656)
T 1k3i_A 368 STAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTN---AHIITLGEPGTSPN 444 (656)
T ss_dssp SSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCC---EEEEECCSTTSCCE
T ss_pred ccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCc---ceEEEcCCCCCCCe
Confidence 67899999999999864311111 12344555554 489999999975321 11221 12677899999999
Q ss_pred EEecCCCCCCCCCceeEEEEe-CCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEE-
Q 013179 223 TQLKLPGQAPSSRCGHTITSG-GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL- 300 (448)
Q Consensus 223 ~~~~~~g~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~- 300 (448)
+.+. .+.+|.+|..|++++. +++|||+||.+.... .......+++++||+.+++|+.+..+ |.+|.+|+++++
T Consensus 445 ~~~~-~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~-~~~~~~~~~v~~ydp~t~~W~~~~~~---~~~R~~hs~a~ll 519 (656)
T 1k3i_A 445 TVFA-SNGLYFARTFHTSVVLPDGSTFITGGQRRGIP-FEDSTPVFTPEIYVPEQDTFYKQNPN---SIVRVYHSISLLL 519 (656)
T ss_dssp EEEC-TTCCSSCCBSCEEEECTTSCEEEECCBSBCCT-TCCCSBCCCCEEEEGGGTEEEECCCC---SSCCCTTEEEEEC
T ss_pred eEEc-cCCCCCCcccCCeEECCCCCEEEECCcccCcC-cCCCCcccceEEEcCCCCceeecCCC---CCccccccHhhcC
Confidence 9886 2378999999998887 999999999763210 00134578999999999999998764 669999998888
Q ss_pred -CCEEEEEccCC
Q 013179 301 -GSLYLLFGGFD 311 (448)
Q Consensus 301 -~~~i~v~GG~~ 311 (448)
+++|||+||..
T Consensus 520 ~dg~v~v~GG~~ 531 (656)
T 1k3i_A 520 PDGRVFNGGGGL 531 (656)
T ss_dssp TTSCEEEEECCC
T ss_pred CCcEEEecCCCC
Confidence 89999999964
No 19
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.60 E-value=0.014 Score=54.67 Aligned_cols=207 Identities=7% Similarity=-0.125 Sum_probs=113.1
Q ss_pred cEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCC
Q 013179 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLG 102 (448)
Q Consensus 23 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~ 102 (448)
+.+++..++++|+.... .+.+.++|+.+++-...-..+.. .... ..-+.++..+++||+..- ...+
T Consensus 87 ~~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~----~~~~-~~p~~i~~~~~~lyv~~~----~~~~ 152 (328)
T 3dsm_A 87 RYIHFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDM----DMES-GSTEQMVQYGKYVYVNCW----SYQN 152 (328)
T ss_dssp EEEEEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTC----CTTT-CBCCCEEEETTEEEEEEC----TTCC
T ss_pred cEEEEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCc----cccC-CCcceEEEECCEEEEEcC----CCCC
Confidence 34444344789987743 25699999999875432111100 0000 022334447889999842 0134
Q ss_pred cEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCcc-----CCceEEEeCCCCceEeecCCCCCCCc
Q 013179 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKW-----LSDVYVLDTISLEWMQLPVTGSVPPP 177 (448)
Q Consensus 103 ~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~-----~~~v~~yd~~t~~W~~~~~~~~~p~~ 177 (448)
.+.++|+.+++.....+.+..| +.++...++++|+......... .+.++++|+.+.+....- ..+..
T Consensus 153 ~v~viD~~t~~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~---~~~~g 224 (328)
T 3dsm_A 153 RILKIDTETDKVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQF---KFKLG 224 (328)
T ss_dssp EEEEEETTTTEEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEE---ECCTT
T ss_pred EEEEEECCCCeEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEE---ecCCC
Confidence 6999999998866543322222 3344445678888753221111 367999999988866432 22222
Q ss_pred cCCceeEEe--CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCC-CCceeEEEE--eCCEEEEEcC
Q 013179 178 RCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPS-SRCGHTITS--GGHYLLLFGG 252 (448)
Q Consensus 178 r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~-~r~~~~~~~--~~~~i~v~GG 252 (448)
..-..++.. ++.+|+..+ .+ ..+|+++.+..... ..+. ...-..+++ .++.|||...
T Consensus 225 ~~p~~la~~~d~~~lyv~~~---------~v------~~~d~~t~~~~~~~---~~~~~~~~p~gi~vdp~~g~lyva~~ 286 (328)
T 3dsm_A 225 DWPSEVQLNGTRDTLYWINN---------DI------WRMPVEADRVPVRP---FLEFRDTKYYGLTVNPNNGEVYVADA 286 (328)
T ss_dssp CCCEEEEECTTSCEEEEESS---------SE------EEEETTCSSCCSSC---SBCCCSSCEEEEEECTTTCCEEEEEC
T ss_pred CCceeEEEecCCCEEEEEcc---------EE------EEEECCCCceeeee---eecCCCCceEEEEEcCCCCeEEEEcc
Confidence 222344444 567888643 23 34477776653211 1111 233345555 3679999863
Q ss_pred CCCCCCcccccceeCcEEEEEcCCC
Q 013179 253 HGTGGWLSRYDIYYNDTIILDRLSA 277 (448)
Q Consensus 253 ~~~~~~~~~~~~~~~~v~~yd~~~~ 277 (448)
.+- ...+.|.+||++..
T Consensus 287 ~~y--------~~~~~V~v~d~~g~ 303 (328)
T 3dsm_A 287 IDY--------QQQGIVYRYSPQGK 303 (328)
T ss_dssp TTS--------SSEEEEEEECTTCC
T ss_pred ccc--------ccCCEEEEECCCCC
Confidence 211 01357999999843
No 20
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.58 E-value=0.028 Score=50.07 Aligned_cols=189 Identities=13% Similarity=0.042 Sum_probs=115.3
Q ss_pred cceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEE
Q 013179 78 AFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYV 157 (448)
Q Consensus 78 ~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~ 157 (448)
+-+.....++.||+-.|..+. +.+.++|+.+++-..-.. +|...++.+.+..++ +||+.... -+.+++
T Consensus 22 ftqGL~~~~~~LyestG~~g~---S~v~~vD~~tgkv~~~~~---l~~~~fgeGi~~~~~-~ly~ltw~-----~~~v~v 89 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETGR---SSVRKVDLETGRILQRAE---VPPPYFGAGIVAWRD-RLIQLTWR-----NHEGFV 89 (243)
T ss_dssp CEEEEEEETTEEEEEECCTTS---CEEEEEETTTCCEEEEEE---CCTTCCEEEEEEETT-EEEEEESS-----SSEEEE
T ss_pred ccccEEEECCEEEEECCCCCC---ceEEEEECCCCCEEEEEe---CCCCcceeEEEEeCC-EEEEEEee-----CCEEEE
Confidence 445667778999999986543 468999999998766543 666666666777764 99998643 245899
Q ss_pred EeCCCCceEeecCCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceE-EecCCCCCCCC-C
Q 013179 158 LDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT-QLKLPGQAPSS-R 235 (448)
Q Consensus 158 yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~-~~~~~g~~p~~-r 235 (448)
||+.+.+-..- .+.+..+.+++..+++||+--|. +.+..+|+++.+-. .++.. ..+.+ +
T Consensus 90 ~D~~tl~~~~t-----i~~~~~Gwglt~dg~~L~vSdgs-------------~~l~~iDp~t~~~~~~I~V~-~~g~~~~ 150 (243)
T 3mbr_X 90 YDLATLTPRAR-----FRYPGEGWALTSDDSHLYMSDGT-------------AVIRKLDPDTLQQVGSIKVT-AGGRPLD 150 (243)
T ss_dssp EETTTTEEEEE-----EECSSCCCEEEECSSCEEEECSS-------------SEEEEECTTTCCEEEEEECE-ETTEECC
T ss_pred EECCcCcEEEE-----EeCCCCceEEeeCCCEEEEECCC-------------CeEEEEeCCCCeEEEEEEEc-cCCcccc
Confidence 99988664432 22233556666667788887552 23445599887653 33321 11222 1
Q ss_pred ceeEEEEeCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceE---EeccCCC------CCCCccceEEEEE--CCEE
Q 013179 236 CGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWK---RLPIGNE------PPPARAYHSMTCL--GSLY 304 (448)
Q Consensus 236 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~---~~~~~~~------~p~~r~~~~~~~~--~~~i 304 (448)
.---+...+++||+--- ..++|.+.|+.+.+-. .+..... .+..-.--+.+.. ++++
T Consensus 151 ~lNeLe~~~G~lyanvw------------~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~l 218 (243)
T 3mbr_X 151 NLNELEWVNGELLANVW------------LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRL 218 (243)
T ss_dssp CEEEEEEETTEEEEEET------------TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEE
T ss_pred cceeeEEeCCEEEEEEC------------CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEE
Confidence 11234556888886432 2368999999988643 3332211 0111122344444 4789
Q ss_pred EEEcc
Q 013179 305 LLFGG 309 (448)
Q Consensus 305 ~v~GG 309 (448)
||-|-
T Consensus 219 fVTGK 223 (243)
T 3mbr_X 219 FVTGK 223 (243)
T ss_dssp EEEET
T ss_pred EEECC
Confidence 99883
No 21
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.47 E-value=0.0082 Score=63.57 Aligned_cols=228 Identities=8% Similarity=-0.003 Sum_probs=126.5
Q ss_pred ECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCCCcEEE
Q 013179 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWV 106 (448)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~~~~~~ 106 (448)
..++.|++ |... .-+++||+.+++++.+... ..+. ..-.+++.. ++.|++-.. ..+++
T Consensus 415 d~~g~lWi-gt~~-----~Gl~~~~~~~~~~~~~~~~-------~~~~-~~v~~i~~d~~g~lwigt~-------~Gl~~ 473 (781)
T 3v9f_A 415 DSEGNLWF-GTYL-----GNISYYNTRLKKFQIIELE-------KNEL-LDVRVFYEDKNKKIWIGTH-------AGVFV 473 (781)
T ss_dssp CTTSCEEE-EETT-----EEEEEECSSSCEEEECCST-------TTCC-CCEEEEEECTTSEEEEEET-------TEEEE
T ss_pred CCCCCEEE-Eecc-----CCEEEEcCCCCcEEEeccC-------CCCC-CeEEEEEECCCCCEEEEEC-------CceEE
Confidence 34466666 3221 3488999999988776421 0111 122333333 457766421 34999
Q ss_pred EECCCCcEEEeecCCCCCC-cCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEE
Q 013179 107 LDTDIWQWSELTSFGDLPS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATM 185 (448)
Q Consensus 107 ~d~~t~~W~~~~~~~~~p~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~ 185 (448)
||+.+++|.........+. .....+++...++.|++..- -..+++||+.+.+++.+.....++.... .++..
T Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~------~~Gl~~~~~~~~~~~~~~~~~~l~~~~i-~~i~~ 546 (781)
T 3v9f_A 474 IDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF------GGGVGIYTPDMQLVRKFNQYEGFCSNTI-NQIYR 546 (781)
T ss_dssp EESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES------SSCEEEECTTCCEEEEECTTTTCSCSCE-EEEEE
T ss_pred EeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc------CCCEEEEeCCCCeEEEccCCCCCCCCee-EEEEE
Confidence 9999999987763211111 11223333445667887431 1348999999999998863222222211 12222
Q ss_pred e-CCEEEEEcccCCCCCccCceeeeccc-ccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCcccc
Q 013179 186 V-EKRLLIYGGRGGGGPIMGDLWALKGL-IEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRY 262 (448)
Q Consensus 186 ~-~~~lyv~GG~~~~~~~~~d~~~~~~~-~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~ 262 (448)
. ++.|++-.. ..+ ..||+++++++.......+|.... .+++. .++.|++.+.
T Consensus 547 d~~g~lWi~T~--------------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~---------- 601 (781)
T 3v9f_A 547 SSKGQMWLATG--------------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN---------- 601 (781)
T ss_dssp CTTSCEEEEET--------------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS----------
T ss_pred CCCCCEEEEEC--------------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC----------
Confidence 1 456766432 123 567888888887754323444333 34444 3567887652
Q ss_pred cceeCcEEEEEcCCCceEEeccCCCCCCCccceEEE-EECCEEEEEccCCC
Q 013179 263 DIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMT-CLGSLYLLFGGFDG 312 (448)
Q Consensus 263 ~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~ 312 (448)
+.+.+||+.+.++.........+...+...++ ...+.-+.|||.++
T Consensus 602 ----~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~G 648 (781)
T 3v9f_A 602 ----TGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSING 648 (781)
T ss_dssp ----SCEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEEEETTE
T ss_pred ----CceEEEECCCCceEEecccCCccccccccCceEECCCCEEEEECCCc
Confidence 24899999999988876544444444433333 33333455566654
No 22
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.47 E-value=0.071 Score=49.80 Aligned_cols=232 Identities=10% Similarity=0.001 Sum_probs=124.7
Q ss_pred cEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcE-EeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCC
Q 013179 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLW-FQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRL 101 (448)
Q Consensus 23 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~ 101 (448)
+.+++.+ +++|+.... .+.+.++|+.+.+- ..++. ...| .+.++..++++|+.... .
T Consensus 47 ~~i~~~~-~~lyv~~~~-----~~~v~viD~~t~~~~~~i~~---------~~~p--~~i~~~~~g~lyv~~~~-----~ 104 (328)
T 3dsm_A 47 QSMVIRD-GIGWIVVNN-----SHVIFAIDINTFKEVGRITG---------FTSP--RYIHFLSDEKAYVTQIW-----D 104 (328)
T ss_dssp EEEEEET-TEEEEEEGG-----GTEEEEEETTTCCEEEEEEC---------CSSE--EEEEEEETTEEEEEEBS-----C
T ss_pred eEEEEEC-CEEEEEEcC-----CCEEEEEECcccEEEEEcCC---------CCCC--cEEEEeCCCeEEEEECC-----C
Confidence 4455545 788887752 35699999998875 33321 1112 22333367899998743 2
Q ss_pred CcEEEEECCCCcEEEeecCCCCCC-cCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCC
Q 013179 102 GDFWVLDTDIWQWSELTSFGDLPS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCG 180 (448)
Q Consensus 102 ~~~~~~d~~t~~W~~~~~~~~~p~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~ 180 (448)
+.+.++|+.+++-....+.+.... ...-+.++. .++++|+..- ..-+.+.++|+.+++....-..+. .|
T Consensus 105 ~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~----~~~~~v~viD~~t~~~~~~i~~g~--~p--- 174 (328)
T 3dsm_A 105 YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCW----SYQNRILKIDTETDKVVDELTIGI--QP--- 174 (328)
T ss_dssp SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEEC----TTCCEEEEEETTTTEEEEEEECSS--CB---
T ss_pred CeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcC----CCCCEEEEEECCCCeEEEEEEcCC--Cc---
Confidence 469999999987654322222000 002223334 4569998742 113469999999987654321112 12
Q ss_pred ceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEe--CCEEEEEcCCCCCC
Q 013179 181 HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG--GHYLLLFGGHGTGG 257 (448)
Q Consensus 181 ~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~--~~~i~v~GG~~~~~ 257 (448)
+.++.. ++++|+............. .-..+..+|+++.+....- ..|....-..+++. ++.||+..+
T Consensus 175 ~~i~~~~dG~l~v~~~~~~~~~~~~~--~~~~v~~id~~t~~v~~~~---~~~~g~~p~~la~~~d~~~lyv~~~----- 244 (328)
T 3dsm_A 175 TSLVMDKYNKMWTITDGGYEGSPYGY--EAPSLYRIDAETFTVEKQF---KFKLGDWPSEVQLNGTRDTLYWINN----- 244 (328)
T ss_dssp CCCEECTTSEEEEEBCCBCTTCSSCB--CCCEEEEEETTTTEEEEEE---ECCTTCCCEEEEECTTSCEEEEESS-----
T ss_pred cceEEcCCCCEEEEECCCccCCcccc--CCceEEEEECCCCeEEEEE---ecCCCCCceeEEEecCCCEEEEEcc-----
Confidence 233333 5788877643211100000 0134556698888765322 12222223355554 678888642
Q ss_pred CcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEE--ECCEEEEEc
Q 013179 258 WLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTC--LGSLYLLFG 308 (448)
Q Consensus 258 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~i~v~G 308 (448)
.++++|+.+.+........ .....-.++++ .+++|||..
T Consensus 245 ----------~v~~~d~~t~~~~~~~~~~--~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 245 ----------DIWRMPVEADRVPVRPFLE--FRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp ----------SEEEEETTCSSCCSSCSBC--CCSSCEEEEEECTTTCCEEEEE
T ss_pred ----------EEEEEECCCCceeeeeeec--CCCCceEEEEEcCCCCeEEEEc
Confidence 5899999887753211111 00223344444 267899886
No 23
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.39 E-value=0.032 Score=49.69 Aligned_cols=187 Identities=16% Similarity=0.072 Sum_probs=111.6
Q ss_pred EEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCc
Q 013179 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGD 103 (448)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~ 103 (448)
+.+.+.++.+|+-.|..+. +.+..+|+.+++=..-. .+|..-++..++..+++||+....+ +.
T Consensus 24 qGL~~~~~~LyestG~~g~---S~v~~vD~~tgkv~~~~---------~l~~~~fgeGi~~~~~~ly~ltw~~-----~~ 86 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGETGR---SSVRKVDLETGRILQRA---------EVPPPYFGAGIVAWRDRLIQLTWRN-----HE 86 (243)
T ss_dssp EEEEEETTEEEEEECCTTS---CEEEEEETTTCCEEEEE---------ECCTTCCEEEEEEETTEEEEEESSS-----SE
T ss_pred ccEEEECCEEEEECCCCCC---ceEEEEECCCCCEEEEE---------eCCCCcceeEEEEeCCEEEEEEeeC-----CE
Confidence 4444444899999987543 56899999999764433 2455557788888999999995433 46
Q ss_pred EEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEe-ecCCCCCCCccCC-c
Q 013179 104 FWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ-LPVTGSVPPPRCG-H 181 (448)
Q Consensus 104 ~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~-~~~~~~~p~~r~~-~ 181 (448)
+++||+.+.+-..-- |.+..+.+++.- ++++|+-=| .+.++.+|+.+.+-.. +.+. ..+.+... -
T Consensus 87 v~v~D~~tl~~~~ti-----~~~~~Gwglt~d-g~~L~vSdg------s~~l~~iDp~t~~~~~~I~V~-~~g~~~~~lN 153 (243)
T 3mbr_X 87 GFVYDLATLTPRARF-----RYPGEGWALTSD-DSHLYMSDG------TAVIRKLDPDTLQQVGSIKVT-AGGRPLDNLN 153 (243)
T ss_dssp EEEEETTTTEEEEEE-----ECSSCCCEEEEC-SSCEEEECS------SSEEEEECTTTCCEEEEEECE-ETTEECCCEE
T ss_pred EEEEECCcCcEEEEE-----eCCCCceEEeeC-CCEEEEECC------CCeEEEEeCCCCeEEEEEEEc-cCCcccccce
Confidence 999999987654432 223345555544 447888643 3569999999876433 3321 22223211 2
Q ss_pred eeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEE-ecCCCCCC--------CCCceeEEEE--eCCEEEEE
Q 013179 182 TATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ-LKLPGQAP--------SSRCGHTITS--GGHYLLLF 250 (448)
Q Consensus 182 ~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~-~~~~g~~p--------~~r~~~~~~~--~~~~i~v~ 250 (448)
-+...+++||+---. . +.+.+-|+++.+-.. +...+-.| ..-.--+.++ ..++|||.
T Consensus 154 eLe~~~G~lyanvw~------s------~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT 221 (243)
T 3mbr_X 154 ELEWVNGELLANVWL------T------SRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT 221 (243)
T ss_dssp EEEEETTEEEEEETT------T------TEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE
T ss_pred eeEEeCCEEEEEECC------C------CeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE
Confidence 234458888853311 1 334444998887643 33222111 1112234444 35799998
Q ss_pred cC
Q 013179 251 GG 252 (448)
Q Consensus 251 GG 252 (448)
|-
T Consensus 222 GK 223 (243)
T 3mbr_X 222 GK 223 (243)
T ss_dssp ET
T ss_pred CC
Confidence 83
No 24
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.27 E-value=0.1 Score=47.77 Aligned_cols=226 Identities=8% Similarity=0.052 Sum_probs=109.3
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..++.|+.++ .+.++|..+++....-. .........+..-++++++.|+.++ .+..||
T Consensus 33 ~~~~~l~s~~~dg-----~i~iw~~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~l~s~~~d~-----~i~vwd 93 (312)
T 4ery_A 33 PNGEWLASSSADK-----LIKIWGAYDGKFEKTIS---------GHKLGISDVAWSSDSNLLVSASDDK-----TLKIWD 93 (312)
T ss_dssp TTSSEEEEEETTS-----CEEEEETTTCCEEEEEC---------CCSSCEEEEEECTTSSEEEEEETTS-----EEEEEE
T ss_pred CCCCEEEEeeCCC-----eEEEEeCCCcccchhhc---------cCCCceEEEEEcCCCCEEEEECCCC-----EEEEEE
Confidence 4566777777643 47888988877654321 1111111112222567777777543 588899
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe-C
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-E 187 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~ 187 (448)
+.+.+-...-. ... ..-.+++...++.+++.|+.++ .+..||+.+.+-...-. ....+ -.++... +
T Consensus 94 ~~~~~~~~~~~---~~~-~~v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~--~~~~~--v~~~~~~~~ 160 (312)
T 4ery_A 94 VSSGKCLKTLK---GHS-NYVFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTGKCLKTLP--AHSDP--VSAVHFNRD 160 (312)
T ss_dssp TTTCCEEEEEE---CCS-SCEEEEEECSSSSEEEEEETTS-----CEEEEETTTCCEEEEEC--CCSSC--EEEEEECTT
T ss_pred CCCCcEEEEEc---CCC-CCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCEEEEEec--CCCCc--EEEEEEcCC
Confidence 98876433221 111 1112223334556777777654 37889988765433210 11111 1112222 4
Q ss_pred CEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCccccccee
Q 013179 188 KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIYY 266 (448)
Q Consensus 188 ~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~ 266 (448)
+.+++.|+.++ .+..||+.+.+-..... ....... ..+.. .++..++.|+.+
T Consensus 161 ~~~l~~~~~d~------------~i~~wd~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~l~~~~~d------------ 213 (312)
T 4ery_A 161 GSLIVSSSYDG------------LCRIWDTASGQCLKTLI--DDDNPPV-SFVKFSPNGKYILAATLD------------ 213 (312)
T ss_dssp SSEEEEEETTS------------CEEEEETTTCCEEEEEC--CSSCCCE-EEEEECTTSSEEEEEETT------------
T ss_pred CCEEEEEeCCC------------cEEEEECCCCceeeEEe--ccCCCce-EEEEECCCCCEEEEEcCC------------
Confidence 56777776543 23345666655432211 1111111 12222 345556666543
Q ss_pred CcEEEEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEccCCCC
Q 013179 267 NDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK 313 (448)
Q Consensus 267 ~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~ 313 (448)
..+.+||+.+.+-...-.................++.+++.|+.++.
T Consensus 214 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 260 (312)
T 4ery_A 214 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 260 (312)
T ss_dssp TEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSC
T ss_pred CeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCE
Confidence 35888998876543322211111111111222235677888887653
No 25
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.19 E-value=0.029 Score=59.47 Aligned_cols=232 Identities=8% Similarity=0.030 Sum_probs=124.6
Q ss_pred EEEEECCcE-EEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCC
Q 013179 24 SAVNIGKSK-VVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRL 101 (448)
Q Consensus 24 ~~~~~~~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~ 101 (448)
+++...++. |++ |... .-+++||+.++++........ .++... -.+++.. ++.|++-..
T Consensus 410 ~i~~d~~g~~lWi-gt~~-----~Gl~~~d~~~~~~~~~~~~~~-----~l~~~~-v~~i~~d~~g~lwigt~------- 470 (795)
T 4a2l_A 410 AVYVDEKKSLVYI-GTHA-----GGLSILHRNSGQVENFNQRNS-----QLVNEN-VYAILPDGEGNLWLGTL------- 470 (795)
T ss_dssp EEEEETTTTEEEE-EETT-----TEEEEEETTTCCEEEECTTTS-----CCSCSC-EEEEEECSSSCEEEEES-------
T ss_pred EEEEcCCCCEEEE-EeCc-----CceeEEeCCCCcEEEeecCCC-----CcCCCe-eEEEEECCCCCEEEEec-------
Confidence 333445566 555 3321 238899999998877653210 112211 2233333 466776532
Q ss_pred CcEEEEECCCCcEEEeecCC---CCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCcc
Q 013179 102 GDFWVLDTDIWQWSELTSFG---DLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPR 178 (448)
Q Consensus 102 ~~~~~~d~~t~~W~~~~~~~---~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r 178 (448)
+.+++||+.+++|+.+.... .++. ..-.+.....++.|++... ..+++||+.+.++ .+..........
T Consensus 471 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~~~-~~~~~~~~~~l~ 541 (795)
T 4a2l_A 471 SALVRFNPEQRSFTTIEKEKDGTPVVS-KQITTLFRDSHKRLWIGGE-------EGLSVFKQEGLDI-QKASILPVSNVT 541 (795)
T ss_dssp SCEEEEETTTTEEEECCBCTTCCBCCC-CCEEEEEECTTCCEEEEES-------SCEEEEEEETTEE-EECCCSCSCGGG
T ss_pred CceeEEeCCCCeEEEccccccccccCC-ceEEEEEECCCCCEEEEeC-------CceEEEeCCCCeE-EEecCCCCCCCC
Confidence 24899999999998876420 1111 1123333345667887542 3489999998888 543110001111
Q ss_pred CCc--eeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCC
Q 013179 179 CGH--TATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHG 254 (448)
Q Consensus 179 ~~~--~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~ 254 (448)
... ++... ++.|++-.. . .+..||+++++++.......+|.... .+++. .++.|++.+.
T Consensus 542 ~~~i~~i~~d~~g~lWigT~-~-------------Gl~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lWi~t~-- 604 (795)
T 4a2l_A 542 KLFTNCIYEASNGIIWVGTR-E-------------GFYCFNEKDKQIKRYNTTNGLPNNVV-YGILEDSFGRLWLSTN-- 604 (795)
T ss_dssp GSCEEEEEECTTSCEEEEES-S-------------CEEEEETTTTEEEEECGGGTCSCSCE-EEEEECTTSCEEEEET--
T ss_pred CCeeEEEEECCCCCEEEEeC-C-------------CceeECCCCCcEEEeCCCCCCchhhe-EEEEECCCCCEEEEcC--
Confidence 111 22221 466776332 1 23456888888887653323444332 34444 3567887652
Q ss_pred CCCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccce-EEEEECCEEEEEccCCC
Q 013179 255 TGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYH-SMTCLGSLYLLFGGFDG 312 (448)
Q Consensus 255 ~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~-~~~~~~~~i~v~GG~~~ 312 (448)
+.+.+||+.+.++.........+...+.. +++...+.-+.|||..+
T Consensus 605 ------------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~G 651 (795)
T 4a2l_A 605 ------------RGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGING 651 (795)
T ss_dssp ------------TEEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEETTE
T ss_pred ------------CceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEecCCc
Confidence 34889999999998876544445444433 33333333445566554
No 26
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.19 E-value=0.073 Score=47.86 Aligned_cols=187 Identities=12% Similarity=-0.023 Sum_probs=109.5
Q ss_pred eeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEe
Q 013179 80 HIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLD 159 (448)
Q Consensus 80 h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd 159 (448)
......++.||+-.|..+. +.+.++|+++++-..-.+ ++...++.+.+..++ +||+.... -+.+++||
T Consensus 46 qGL~~~~~~LyestG~~g~---S~v~~vD~~Tgkv~~~~~---l~~~~FgeGit~~g~-~ly~ltw~-----~~~v~v~D 113 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNGR---SSIRKVDIESGKTLQQIE---LGKRYFGEGISDWKD-KIVGLTWK-----NGLGFVWN 113 (262)
T ss_dssp EEEEEETTEEEEEEEETTE---EEEEEECTTTCCEEEEEE---CCTTCCEEEEEEETT-EEEEEESS-----SSEEEEEE
T ss_pred ceEEEECCEEEEECCCCCC---ceEEEEECCCCcEEEEEe---cCCccceeEEEEeCC-EEEEEEee-----CCEEEEEE
Confidence 4445558899999986542 468999999998655443 554445555666655 99998653 24589999
Q ss_pred CCCCceEeecCCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceE-EecCCC-CCCCCCce
Q 013179 160 TISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT-QLKLPG-QAPSSRCG 237 (448)
Q Consensus 160 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~-~~~~~g-~~p~~r~~ 237 (448)
+.+.+-..- .+.+-.+.+++..++++|+.-|. +.+..+|+++.+-. .++... ..|...-.
T Consensus 114 ~~t~~~~~t-----i~~~~eG~glt~dg~~L~~SdGs-------------~~i~~iDp~T~~v~~~I~V~~~g~~~~~lN 175 (262)
T 3nol_A 114 IRNLRQVRS-----FNYDGEGWGLTHNDQYLIMSDGT-------------PVLRFLDPESLTPVRTITVTAHGEELPELN 175 (262)
T ss_dssp TTTCCEEEE-----EECSSCCCCEEECSSCEEECCSS-------------SEEEEECTTTCSEEEEEECEETTEECCCEE
T ss_pred CccCcEEEE-----EECCCCceEEecCCCEEEEECCC-------------CeEEEEcCCCCeEEEEEEeccCCccccccc
Confidence 988764432 12223555666667788886541 22344599886653 333210 01111111
Q ss_pred eEEEEeCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEeccCC-C-------CCCCccceEEEEE--CCEEEEE
Q 013179 238 HTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGN-E-------PPPARAYHSMTCL--GSLYLLF 307 (448)
Q Consensus 238 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~-~-------~p~~r~~~~~~~~--~~~i~v~ 307 (448)
-+...+++||+-- ...++|.+.|+.+.+-...-... . .+..-.-.+.+.. ++++||.
T Consensus 176 -ELe~~~G~lyan~------------w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVT 242 (262)
T 3nol_A 176 -ELEWVDGEIFANV------------WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVT 242 (262)
T ss_dssp -EEEEETTEEEEEE------------TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEE
T ss_pred -eeEEECCEEEEEE------------ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEE
Confidence 2445588888632 12478999999998754432221 0 1111222444444 4789888
Q ss_pred cc
Q 013179 308 GG 309 (448)
Q Consensus 308 GG 309 (448)
|-
T Consensus 243 GK 244 (262)
T 3nol_A 243 GK 244 (262)
T ss_dssp ET
T ss_pred CC
Confidence 84
No 27
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.10 E-value=0.14 Score=47.79 Aligned_cols=116 Identities=12% Similarity=0.046 Sum_probs=65.1
Q ss_pred EEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcE
Q 013179 25 AVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDF 104 (448)
Q Consensus 25 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~ 104 (448)
+....++.+++.|+.+ ..+.+||+.++++..+.... .........+..-++++++.|+.++ .+
T Consensus 14 ~~~s~~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~~~~~dg-----~i 76 (372)
T 1k8k_C 14 HAWNKDRTQIAICPNN-----HEVHIYEKSGNKWVQVHELK-------EHNGQVTGVDWAPDSNRIVTCGTDR-----NA 76 (372)
T ss_dssp EEECTTSSEEEEECSS-----SEEEEEEEETTEEEEEEEEE-------CCSSCEEEEEEETTTTEEEEEETTS-----CE
T ss_pred EEECCCCCEEEEEeCC-----CEEEEEeCCCCcEEeeeeec-------CCCCcccEEEEeCCCCEEEEEcCCC-----eE
Confidence 3334556788888753 35899999999776655331 1112222222333566777777543 48
Q ss_pred EEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 105 WVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 105 ~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
..||+.+.++...... ......-.+++...++..++.|+.++ .+..||+.+..
T Consensus 77 ~vwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~~ 129 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVI--LRINRAARCVRWAPNEKKFAVGSGSR-----VISICYFEQEN 129 (372)
T ss_dssp EEEEEETTEEEEEEEC--CCCSSCEEEEEECTTSSEEEEEETTS-----SEEEEEEETTT
T ss_pred EEEECCCCeeeeeEEe--ecCCCceeEEEECCCCCEEEEEeCCC-----EEEEEEecCCC
Confidence 8899988887665431 11112222333334556777776543 35666665543
No 28
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.09 E-value=0.037 Score=49.78 Aligned_cols=192 Identities=14% Similarity=0.006 Sum_probs=110.1
Q ss_pred CCCCcEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCC
Q 013179 19 PRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS 98 (448)
Q Consensus 19 ~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~ 98 (448)
++..-+.+.+.++.+|+-.|..+. +.+.++|+++++=..-. +++..-++..++..+++||+.....
T Consensus 41 ~~~ftqGL~~~~~~LyestG~~g~---S~v~~vD~~Tgkv~~~~---------~l~~~~FgeGit~~g~~ly~ltw~~-- 106 (262)
T 3nol_A 41 TKAFTEGFFYRNGYFYESTGLNGR---SSIRKVDIESGKTLQQI---------ELGKRYFGEGISDWKDKIVGLTWKN-- 106 (262)
T ss_dssp TTCEEEEEEEETTEEEEEEEETTE---EEEEEECTTTCCEEEEE---------ECCTTCCEEEEEEETTEEEEEESSS--
T ss_pred CCcccceEEEECCEEEEECCCCCC---ceEEEEECCCCcEEEEE---------ecCCccceeEEEEeCCEEEEEEeeC--
Confidence 333334444445899999886543 45889999999754432 2344445667788899999995432
Q ss_pred CCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEe-ecCCCCCCCc
Q 013179 99 RRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ-LPVTGSVPPP 177 (448)
Q Consensus 99 ~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~-~~~~~~~p~~ 177 (448)
+.+++||+.+.+-..-- +.+-.+.+.+.- ++.+|+.-| .+.++.+|+.+.+-.. +.+. ....+
T Consensus 107 ---~~v~v~D~~t~~~~~ti-----~~~~eG~glt~d-g~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~-~~g~~ 170 (262)
T 3nol_A 107 ---GLGFVWNIRNLRQVRSF-----NYDGEGWGLTHN-DQYLIMSDG------TPVLRFLDPESLTPVRTITVT-AHGEE 170 (262)
T ss_dssp ---SEEEEEETTTCCEEEEE-----ECSSCCCCEEEC-SSCEEECCS------SSEEEEECTTTCSEEEEEECE-ETTEE
T ss_pred ---CEEEEEECccCcEEEEE-----ECCCCceEEecC-CCEEEEECC------CCeEEEEcCCCCeEEEEEEec-cCCcc
Confidence 46999999987754332 222244555544 447887533 3569999999866433 3321 11112
Q ss_pred cCC-ceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEE-ecCCCCCCC-------CCceeEEEE--eCCE
Q 013179 178 RCG-HTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ-LKLPGQAPS-------SRCGHTITS--GGHY 246 (448)
Q Consensus 178 r~~-~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~-~~~~g~~p~-------~r~~~~~~~--~~~~ 246 (448)
... --+...+++||+-- .. . +.+.+-|+++.+-.. +...+-.|. .-.-.+.++ ..++
T Consensus 171 ~~~lNELe~~~G~lyan~-w~-----~------~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~ 238 (262)
T 3nol_A 171 LPELNELEWVDGEIFANV-WQ-----T------NKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHR 238 (262)
T ss_dssp CCCEEEEEEETTEEEEEE-TT-----S------SEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTE
T ss_pred ccccceeEEECCEEEEEE-cc-----C------CeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCE
Confidence 111 02444588888522 11 1 334444999888744 333221111 112234555 3578
Q ss_pred EEEEcC
Q 013179 247 LLLFGG 252 (448)
Q Consensus 247 i~v~GG 252 (448)
+||.|-
T Consensus 239 lfVTGK 244 (262)
T 3nol_A 239 LFVTGK 244 (262)
T ss_dssp EEEEET
T ss_pred EEEECC
Confidence 999883
No 29
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.95 E-value=0.071 Score=50.58 Aligned_cols=187 Identities=12% Similarity=0.044 Sum_probs=100.6
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-C-CeEEEEcccCCCCCCCcEEEEE
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-D-CHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~-~~lyv~GG~~~~~~~~~~~~~d 108 (448)
+.+|+.|+.+ ..+.++|+.+++-...-.. .. .-.+++.. + ..||+.|+.+ ..+.++|
T Consensus 2 ~~l~vs~~~d-----~~v~v~d~~~~~~~~~~~~---------~~--~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d 60 (391)
T 1l0q_A 2 TFAYIANSES-----DNISVIDVTSNKVTATIPV---------GS--NPMGAVISPDGTKVYVANAHS-----NDVSIID 60 (391)
T ss_dssp EEEEEEETTT-----TEEEEEETTTTEEEEEEEC---------SS--SEEEEEECTTSSEEEEEEGGG-----TEEEEEE
T ss_pred CEEEEEcCCC-----CEEEEEECCCCeEEEEeec---------CC--CcceEEECCCCCEEEEECCCC-----CeEEEEE
Confidence 4677777753 3589999998865433211 11 11233322 3 4577777544 3589999
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEEECCc-EEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe-
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~- 186 (448)
+.+++...... .+. .-.+++...++ .||+.+..+ ..+++||+.+++-.... ... ..-..++..
T Consensus 61 ~~~~~~~~~~~---~~~--~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~---~~~--~~~~~~~~s~ 125 (391)
T 1l0q_A 61 TATNNVIATVP---AGS--SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTV---KTG--KSPLGLALSP 125 (391)
T ss_dssp TTTTEEEEEEE---CSS--SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEE---ECS--SSEEEEEECT
T ss_pred CCCCeEEEEEE---CCC--CccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEE---eCC--CCcceEEECC
Confidence 99887655443 111 22333343333 566655432 35899999988765443 111 111233333
Q ss_pred -CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE--eCCEEEEEcCCCCCCCccccc
Q 013179 187 -EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYD 263 (448)
Q Consensus 187 -~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~ 263 (448)
+..+|+.++.. ..+..+|+.+.+....-..+ ..-..++. .+..||+.++.+
T Consensus 126 dg~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~~~dg~~l~~~~~~~--------- 179 (391)
T 1l0q_A 126 DGKKLYVTNNGD------------KTVSVINTVTKAVINTVSVG-----RSPKGIAVTPDGTKVYVANFDS--------- 179 (391)
T ss_dssp TSSEEEEEETTT------------TEEEEEETTTTEEEEEEECC-----SSEEEEEECTTSSEEEEEETTT---------
T ss_pred CCCEEEEEeCCC------------CEEEEEECCCCcEEEEEecC-----CCcceEEECCCCCEEEEEeCCC---------
Confidence 33576776532 23445687777654433111 11123333 244677766432
Q ss_pred ceeCcEEEEEcCCCceEEe
Q 013179 264 IYYNDTIILDRLSAQWKRL 282 (448)
Q Consensus 264 ~~~~~v~~yd~~~~~W~~~ 282 (448)
+.++++|+.+.+....
T Consensus 180 ---~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 180 ---MSISVIDTVTNSVIDT 195 (391)
T ss_dssp ---TEEEEEETTTTEEEEE
T ss_pred ---CEEEEEECCCCeEEEE
Confidence 3588999887765443
No 30
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.94 E-value=0.071 Score=47.99 Aligned_cols=156 Identities=8% Similarity=-0.077 Sum_probs=93.2
Q ss_pred EEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCc
Q 013179 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGD 103 (448)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~ 103 (448)
+.+.+.++.+|+-.|..+. +.++|+++++=..-. . +..-++..++..+++||+....+ +.
T Consensus 58 qGL~~~~~~Ly~stG~~g~-----v~~iD~~Tgkv~~~~-l---------~~~~FgeGit~~g~~Ly~ltw~~-----~~ 117 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQGT-----LRQLSLESAQPVWME-R---------LGNIFAEGLASDGERLYQLTWTE-----GL 117 (268)
T ss_dssp EEEEEETTEEEEEETTTTE-----EEECCSSCSSCSEEE-E---------CTTCCEEEEEECSSCEEEEESSS-----CE
T ss_pred ceEEEECCEEEEEcCCCCE-----EEEEECCCCcEEeEE-C---------CCCcceeEEEEeCCEEEEEEccC-----CE
Confidence 4444445889998887543 889999998642221 1 22335566788899999985432 46
Q ss_pred EEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEe-ecCCCCCCCccCC-c
Q 013179 104 FWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ-LPVTGSVPPPRCG-H 181 (448)
Q Consensus 104 ~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~-~~~~~~~p~~r~~-~ 181 (448)
+++||+++.+-..--+ .+-.+.+.+..+ +++|+.-| .+.++.+|+.+.+-.. +.+. ..+.+... -
T Consensus 118 v~V~D~~Tl~~~~ti~-----~~~eGwGLt~Dg-~~L~vSdG------s~~l~~iDp~T~~v~~~I~V~-~~g~~v~~lN 184 (268)
T 3nok_A 118 LFTWSGMPPQRERTTR-----YSGEGWGLCYWN-GKLVRSDG------GTMLTFHEPDGFALVGAVQVK-LRGQPVELIN 184 (268)
T ss_dssp EEEEETTTTEEEEEEE-----CSSCCCCEEEET-TEEEEECS------SSEEEEECTTTCCEEEEEECE-ETTEECCCEE
T ss_pred EEEEECCcCcEEEEEe-----CCCceeEEecCC-CEEEEECC------CCEEEEEcCCCCeEEEEEEeC-CCCccccccc
Confidence 9999999877544322 223345555554 48888744 3569999999876443 3221 12222111 1
Q ss_pred eeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEE
Q 013179 182 TATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ 224 (448)
Q Consensus 182 ~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~ 224 (448)
-+...+++||+-- . .-+.+.+-|+++.+-..
T Consensus 185 eLe~~dG~lyanv-w-----------~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 185 ELECANGVIYANI-W-----------HSSDVLEIDPATGTVVG 215 (268)
T ss_dssp EEEEETTEEEEEE-T-----------TCSEEEEECTTTCBEEE
T ss_pred ccEEeCCEEEEEE-C-----------CCCeEEEEeCCCCcEEE
Confidence 2334578888522 1 11334444998887643
No 31
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.93 E-value=0.15 Score=48.73 Aligned_cols=224 Identities=16% Similarity=0.026 Sum_probs=108.0
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..++.|+.+ ..+.+||+.+++-...-. ... ..-.++..++.+++.|+.++ .+..+|
T Consensus 144 ~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~---------~~~--~~v~~~~~~~~~l~~~~~dg-----~i~i~d 202 (401)
T 4aez_A 144 HDGSFLSVGLGN-----GLVDIYDVESQTKLRTMA---------GHQ--ARVGCLSWNRHVLSSGSRSG-----AIHHHD 202 (401)
T ss_dssp TTSSEEEEEETT-----SCEEEEETTTCCEEEEEC---------CCS--SCEEEEEEETTEEEEEETTS-----EEEEEE
T ss_pred CCCCEEEEECCC-----CeEEEEECcCCeEEEEec---------CCC--CceEEEEECCCEEEEEcCCC-----CEEEEe
Confidence 345566666543 247888888776433210 111 12223334666777777553 588889
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe--
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-- 186 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-- 186 (448)
+.+..-...... . ....-.+++...++.+++.|+.++ .+..||+.+.+-...-. . ....-.++...
T Consensus 203 ~~~~~~~~~~~~--~-~~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~--~--~~~~v~~~~~~p~ 270 (401)
T 4aez_A 203 VRIANHQIGTLQ--G-HSSEVCGLAWRSDGLQLASGGNDN-----VVQIWDARSSIPKFTKT--N--HNAAVKAVAWCPW 270 (401)
T ss_dssp TTSSSCEEEEEE--C-CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTCSSEEEEEC--C--CSSCCCEEEECTT
T ss_pred cccCcceeeEEc--C-CCCCeeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCCccEEec--C--CcceEEEEEECCC
Confidence 874332111110 0 111122233334567777787544 48889988754332210 1 11111233333
Q ss_pred CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE--eCCEEEEEcCCCCCCCcccccc
Q 013179 187 EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYDI 264 (448)
Q Consensus 187 ~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~ 264 (448)
+..+++.||...+ ..+..||..+.+-...-. .... -.+++. .+..+++.+|..+
T Consensus 271 ~~~ll~~~~gs~d----------~~i~i~d~~~~~~~~~~~---~~~~--v~~~~~s~~~~~l~~~~g~~d--------- 326 (401)
T 4aez_A 271 QSNLLATGGGTMD----------KQIHFWNAATGARVNTVD---AGSQ--VTSLIWSPHSKEIMSTHGFPD--------- 326 (401)
T ss_dssp STTEEEEECCTTT----------CEEEEEETTTCCEEEEEE---CSSC--EEEEEECSSSSEEEEEECTTT---------
T ss_pred CCCEEEEecCCCC----------CEEEEEECCCCCEEEEEe---CCCc--EEEEEECCCCCeEEEEeecCC---------
Confidence 3467777652222 224455766555433221 1111 123333 3445555545433
Q ss_pred eeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEccCCC
Q 013179 265 YYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (448)
Q Consensus 265 ~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 312 (448)
..+.+||..+.....+..... ...+....+..-++++++.||.++
T Consensus 327 --g~i~v~~~~~~~~~~~~~~~~-h~~~v~~~~~s~dg~~l~s~~~dg 371 (401)
T 4aez_A 327 --NNLSIWSYSSSGLTKQVDIPA-HDTRVLYSALSPDGRILSTAASDE 371 (401)
T ss_dssp --CEEEEEEEETTEEEEEEEEEC-CSSCCCEEEECTTSSEEEEECTTS
T ss_pred --CcEEEEecCCccceeEEEecC-CCCCEEEEEECCCCCEEEEEeCCC
Confidence 358888888876665533211 112222333333567777777664
No 32
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.89 E-value=0.16 Score=46.56 Aligned_cols=219 Identities=13% Similarity=0.051 Sum_probs=109.0
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..++.|+.+ ..+.+||+.+++........ .........+..-+++.++.|+.++ .+..||
T Consensus 107 ~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d 169 (337)
T 1gxr_A 107 PDGCTLIVGGEA-----STLSIWDLAAPTPRIKAELT-------SSAPACYALAISPDSKVCFSCCSDG-----NIAVWD 169 (337)
T ss_dssp TTSSEEEEEESS-----SEEEEEECCCC--EEEEEEE-------CSSSCEEEEEECTTSSEEEEEETTS-----CEEEEE
T ss_pred CCCCEEEEEcCC-----CcEEEEECCCCCcceeeecc-------cCCCceEEEEECCCCCEEEEEeCCC-----cEEEEe
Confidence 456677777653 35889999988754433221 1111111222222556777776543 489999
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe-C
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-E 187 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~ 187 (448)
+.+.+...... .. ...-.+++...++..++.|+.++ .+..||+.+.+-.... ..+.+ -.++... +
T Consensus 170 ~~~~~~~~~~~---~~-~~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~~---~~~~~--v~~~~~s~~ 235 (337)
T 1gxr_A 170 LHNQTLVRQFQ---GH-TDGASCIDISNDGTKLWTGGLDN-----TVRSWDLREGRQLQQH---DFTSQ--IFSLGYCPT 235 (337)
T ss_dssp TTTTEEEEEEC---CC-SSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEE---ECSSC--EEEEEECTT
T ss_pred CCCCceeeeee---cc-cCceEEEEECCCCCEEEEEecCC-----cEEEEECCCCceEeee---cCCCc--eEEEEECCC
Confidence 98876544331 11 11122333334556677776443 4888998876544332 11111 1222232 4
Q ss_pred CEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCccccccee
Q 013179 188 KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIYY 266 (448)
Q Consensus 188 ~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~ 266 (448)
+.++++|+.++ .+..||..+..-..+. .. ...-.++.. .++.+++.|+.+
T Consensus 236 ~~~l~~~~~~~------------~i~~~~~~~~~~~~~~---~~--~~~v~~~~~~~~~~~l~~~~~d------------ 286 (337)
T 1gxr_A 236 GEWLAVGMESS------------NVEVLHVNKPDKYQLH---LH--ESCVLSLKFAYCGKWFVSTGKD------------ 286 (337)
T ss_dssp SSEEEEEETTS------------CEEEEETTSSCEEEEC---CC--SSCEEEEEECTTSSEEEEEETT------------
T ss_pred CCEEEEEcCCC------------cEEEEECCCCCeEEEc---CC--ccceeEEEECCCCCEEEEecCC------------
Confidence 56666776432 2334566655433332 11 111223333 345666666543
Q ss_pred CcEEEEEcCCCceEEeccCCCCCCCccceEEEE-ECCEEEEEccCCC
Q 013179 267 NDTIILDRLSAQWKRLPIGNEPPPARAYHSMTC-LGSLYLLFGGFDG 312 (448)
Q Consensus 267 ~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~ 312 (448)
..+.+||+.+.+-...... .....++.. -++++++.|+.++
T Consensus 287 g~i~~~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~dg 328 (337)
T 1gxr_A 287 NLLNAWRTPYGASIFQSKE-----SSSVLSCDISVDDKYIVTGSGDK 328 (337)
T ss_dssp SEEEEEETTTCCEEEEEEC-----SSCEEEEEECTTSCEEEEEETTS
T ss_pred CcEEEEECCCCeEEEEecC-----CCcEEEEEECCCCCEEEEecCCC
Confidence 3588899887764432221 111222322 2466777777654
No 33
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.83 E-value=0.26 Score=44.50 Aligned_cols=202 Identities=8% Similarity=-0.058 Sum_probs=113.9
Q ss_pred cEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCC
Q 013179 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLG 102 (448)
Q Consensus 23 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~ 102 (448)
|.+.+..++.+|+..|..+ .+.+.++|+.+++=..-- +++...++...+..+++||+..-. .+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i---------~l~~~~fgeGi~~~g~~lyv~t~~-----~~ 86 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIH---------KMDDSYFGEGLTLLNEKLYQVVWL-----KN 86 (266)
T ss_dssp EEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEE---------ECCTTCCEEEEEEETTEEEEEETT-----CS
T ss_pred ccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEE---------ecCCCcceEEEEEeCCEEEEEEec-----CC
Confidence 4444445589999877432 256999999999754432 123334556777788999999542 34
Q ss_pred cEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEe-ecCCCCCCCccC-C
Q 013179 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ-LPVTGSVPPPRC-G 180 (448)
Q Consensus 103 ~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~-~~~~~~~p~~r~-~ 180 (448)
.+++||+.+.+=..--+.+ +| .+.+.+. ..+++|+.-| .+.++.+|+.+.+-.. +.+. ..+.+.. -
T Consensus 87 ~v~viD~~t~~v~~~i~~g-~~---~g~glt~-Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg-~~~~p~~~~ 154 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQ-MK---DGWGLAT-DGKILYGSDG------TSILYEIDPHTFKLIKKHNVK-YNGHRVIRL 154 (266)
T ss_dssp EEEEEETTTTEEEEEEECC-SS---SCCEEEE-CSSSEEEECS------SSEEEEECTTTCCEEEEEECE-ETTEECCCE
T ss_pred EEEEEECCCCcEEEEEECC-CC---CeEEEEE-CCCEEEEECC------CCeEEEEECCCCcEEEEEEEC-CCCcccccc
Confidence 6999999987643322222 22 2333333 3457887633 4679999999866433 3321 1122211 1
Q ss_pred ceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEE-ecCCCC--------CCCCCceeEEEEe--CCEEEE
Q 013179 181 HTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ-LKLPGQ--------APSSRCGHTITSG--GHYLLL 249 (448)
Q Consensus 181 ~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~-~~~~g~--------~p~~r~~~~~~~~--~~~i~v 249 (448)
..+...++++|+--.. .+++..+ |+++.+-.. +...+. .+..-.-.++++. ++++||
T Consensus 155 nele~~dg~lyvn~~~------~~~V~vI------D~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfV 222 (266)
T 2iwa_A 155 NELEYINGEVWANIWQ------TDCIARI------SAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFV 222 (266)
T ss_dssp EEEEEETTEEEEEETT------SSEEEEE------ETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEE
T ss_pred eeEEEECCEEEEecCC------CCeEEEE------ECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEE
Confidence 1333447888865322 1234444 888876533 322111 0111122345553 569999
Q ss_pred EcCCCCCCCcccccceeCcEEEEEcCCC
Q 013179 250 FGGHGTGGWLSRYDIYYNDTIILDRLSA 277 (448)
Q Consensus 250 ~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 277 (448)
.|+.. +.+++.++.+.
T Consensus 223 Tgk~~------------~~v~~i~l~~~ 238 (266)
T 2iwa_A 223 TGKLW------------PKLFEIKLHLV 238 (266)
T ss_dssp EETTC------------SEEEEEEEEEC
T ss_pred ECCCC------------CeEEEEEEecc
Confidence 99754 45777776543
No 34
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.80 E-value=0.11 Score=46.68 Aligned_cols=156 Identities=10% Similarity=-0.039 Sum_probs=95.0
Q ss_pred ceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEE
Q 013179 79 FHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVL 158 (448)
Q Consensus 79 ~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 158 (448)
.......++.||+..|..+. +.++|+++++-..-. ++...++.+.+..+ ++||+.... -+.+++|
T Consensus 57 tqGL~~~~~~Ly~stG~~g~-----v~~iD~~Tgkv~~~~----l~~~~FgeGit~~g-~~Ly~ltw~-----~~~v~V~ 121 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQGT-----LRQLSLESAQPVWME----RLGNIFAEGLASDG-ERLYQLTWT-----EGLLFTW 121 (268)
T ss_dssp EEEEEEETTEEEEEETTTTE-----EEECCSSCSSCSEEE----ECTTCCEEEEEECS-SCEEEEESS-----SCEEEEE
T ss_pred cceEEEECCEEEEEcCCCCE-----EEEEECCCCcEEeEE----CCCCcceeEEEEeC-CEEEEEEcc-----CCEEEEE
Confidence 35666678999999986643 889999988753322 23333444455554 499998653 2458999
Q ss_pred eCCCCceEeecCCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEE-ecCCCCCCCCC-c
Q 013179 159 DTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ-LKLPGQAPSSR-C 236 (448)
Q Consensus 159 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~-~~~~g~~p~~r-~ 236 (448)
|+.+.+-..- .+.+..+.+++..+++||+.-|. +.+..+|+++.+-.. ++.. ..+.+. .
T Consensus 122 D~~Tl~~~~t-----i~~~~eGwGLt~Dg~~L~vSdGs-------------~~l~~iDp~T~~v~~~I~V~-~~g~~v~~ 182 (268)
T 3nok_A 122 SGMPPQRERT-----TRYSGEGWGLCYWNGKLVRSDGG-------------TMLTFHEPDGFALVGAVQVK-LRGQPVEL 182 (268)
T ss_dssp ETTTTEEEEE-----EECSSCCCCEEEETTEEEEECSS-------------SEEEEECTTTCCEEEEEECE-ETTEECCC
T ss_pred ECCcCcEEEE-----EeCCCceeEEecCCCEEEEECCC-------------CEEEEEcCCCCeEEEEEEeC-CCCccccc
Confidence 9988765432 12223456677778899997652 234455988876543 3321 111111 1
Q ss_pred eeEEEEeCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceE
Q 013179 237 GHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWK 280 (448)
Q Consensus 237 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 280 (448)
---+...+++||+-- ...++|.+.|+.+.+-.
T Consensus 183 lNeLe~~dG~lyanv------------w~s~~I~vIDp~TG~V~ 214 (268)
T 3nok_A 183 INELECANGVIYANI------------WHSSDVLEIDPATGTVV 214 (268)
T ss_dssp EEEEEEETTEEEEEE------------TTCSEEEEECTTTCBEE
T ss_pred ccccEEeCCEEEEEE------------CCCCeEEEEeCCCCcEE
Confidence 112445688888632 12478999999988643
No 35
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.78 E-value=0.073 Score=56.24 Aligned_cols=225 Identities=11% Similarity=0.027 Sum_probs=119.9
Q ss_pred EECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCCCcEE
Q 013179 27 NIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFW 105 (448)
Q Consensus 27 ~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~~~~~ 105 (448)
...++.|++-. .. .-+.+||+.++++....... .++. ..-++++.. ++.|++ |... ..++
T Consensus 370 ~d~~g~lWigt-~~-----~Gl~~~~~~~~~~~~~~~~~------~~~~-~~v~~i~~d~~g~lWi-gt~~-----~Gl~ 430 (781)
T 3v9f_A 370 DDGQGKLWIGT-DG-----GGINVFENGKRVAIYNKENR------ELLS-NSVLCSLKDSEGNLWF-GTYL-----GNIS 430 (781)
T ss_dssp ECTTSCEEEEE-BS-----SCEEEEETTEEEEECC-----------CCC-SBEEEEEECTTSCEEE-EETT-----EEEE
T ss_pred EcCCCCEEEEe-CC-----CcEEEEECCCCeEEEccCCC------CCCC-cceEEEEECCCCCEEE-Eecc-----CCEE
Confidence 34456677532 11 23888999887776552110 1111 122344444 567777 3221 2489
Q ss_pred EEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCC-ccCCceeE
Q 013179 106 VLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPP-PRCGHTAT 184 (448)
Q Consensus 106 ~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~-~r~~~~~~ 184 (448)
+||+.+++++.+... .++ ...-.+.+...++.|++... ..+++||+.+.+|+.+........ ...-.++.
T Consensus 431 ~~~~~~~~~~~~~~~-~~~-~~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 501 (781)
T 3v9f_A 431 YYNTRLKKFQIIELE-KNE-LLDVRVFYEDKNKKIWIGTH-------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIA 501 (781)
T ss_dssp EECSSSCEEEECCST-TTC-CCCEEEEEECTTSEEEEEET-------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEE
T ss_pred EEcCCCCcEEEeccC-CCC-CCeEEEEEECCCCCEEEEEC-------CceEEEeCCCCeEEecccCcccccccceeEEEE
Confidence 999999999887631 111 12223344445668887431 459999999999987752110001 11111222
Q ss_pred Ee-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCcccc
Q 013179 185 MV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRY 262 (448)
Q Consensus 185 ~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~ 262 (448)
.. ++.|++-. .. ..+.+||+++++++.......+|.... .+++. .++.|++-..
T Consensus 502 ~d~~g~lWigt-~~------------~Gl~~~~~~~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~---------- 557 (781)
T 3v9f_A 502 QDSEGRFWIGT-FG------------GGVGIYTPDMQLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG---------- 557 (781)
T ss_dssp ECTTCCEEEEE-SS------------SCEEEECTTCCEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET----------
T ss_pred EcCCCCEEEEE-cC------------CCEEEEeCCCCeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC----------
Confidence 22 45676632 21 123456888888888764323333222 22333 3567777542
Q ss_pred cceeCcE-EEEEcCCCceEEeccCCCCCCCccceEEEEE-CCEEEEEc
Q 013179 263 DIYYNDT-IILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (448)
Q Consensus 263 ~~~~~~v-~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~G 308 (448)
+-+ ++||+.+.++.........|.... .+++.- ++.|++.+
T Consensus 558 ----~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 558 ----EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWAST 600 (781)
T ss_dssp ----TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEEC
T ss_pred ----CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEc
Confidence 236 899999988887765433344333 333333 46777654
No 36
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.76 E-value=0.38 Score=45.40 Aligned_cols=209 Identities=16% Similarity=0.162 Sum_probs=112.1
Q ss_pred EEECCcEEEEEcCCCCCcccCceEEEEcCCCc--EEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCc
Q 013179 26 VNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKL--WFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGD 103 (448)
Q Consensus 26 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~ 103 (448)
..+.++.||+... ...++.||+.+++ |+.-.. . ....+.+..++.+|+... ...
T Consensus 99 ~~~~~~~v~v~~~------~g~l~a~d~~tG~~~W~~~~~-----------~-~~~~~p~~~~~~v~v~~~------~g~ 154 (376)
T 3q7m_A 99 VTVSGGHVYIGSE------KAQVYALNTSDGTVAWQTKVA-----------G-EALSRPVVSDGLVLIHTS------NGQ 154 (376)
T ss_dssp EEEETTEEEEEET------TSEEEEEETTTCCEEEEEECS-----------S-CCCSCCEEETTEEEEECT------TSE
T ss_pred ceEeCCEEEEEcC------CCEEEEEECCCCCEEEEEeCC-----------C-ceEcCCEEECCEEEEEcC------CCe
Confidence 3444578887543 1469999999875 755321 1 112233456778877543 135
Q ss_pred EEEEECCCCc--EEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc--eEeecCCCCCCCcc-
Q 013179 104 FWVLDTDIWQ--WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLPVTGSVPPPR- 178 (448)
Q Consensus 104 ~~~~d~~t~~--W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~p~~r- 178 (448)
++.||+.+++ |+.-... .....+...+.++. ++.+|+ |..+ ..++.||+.+++ |+.-. ..|...
T Consensus 155 l~~~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~-~~~v~~-g~~~-----g~l~~~d~~tG~~~w~~~~---~~~~~~~ 223 (376)
T 3q7m_A 155 LQALNEADGAVKWTVNLDM-PSLSLRGESAPTTA-FGAAVV-GGDN-----GRVSAVLMEQGQMIWQQRI---SQATGST 223 (376)
T ss_dssp EEEEETTTCCEEEEEECCC------CCCCCCEEE-TTEEEE-CCTT-----TEEEEEETTTCCEEEEEEC---CC-----
T ss_pred EEEEECCCCcEEEEEeCCC-CceeecCCCCcEEE-CCEEEE-EcCC-----CEEEEEECCCCcEEEEEec---ccCCCCc
Confidence 9999998876 7765421 11111112223333 447766 3221 358999987654 76543 111111
Q ss_pred -------CCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCC--ceEEecCCCCCCCCCceeEEEEeCCEEEE
Q 013179 179 -------CGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETP--GWTQLKLPGQAPSSRCGHTITSGGHYLLL 249 (448)
Q Consensus 179 -------~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~--~W~~~~~~g~~p~~r~~~~~~~~~~~i~v 249 (448)
.....+..++.+|+.+.. ..+..+|+++. .|+... +. ..+.++.++.||+
T Consensus 224 ~~~~~~~~~~~p~~~~~~v~~~~~~-------------g~l~~~d~~tG~~~w~~~~-----~~---~~~~~~~~~~l~~ 282 (376)
T 3q7m_A 224 EIDRLSDVDTTPVVVNGVVFALAYN-------------GNLTALDLRSGQIMWKREL-----GS---VNDFIVDGNRIYL 282 (376)
T ss_dssp ------CCCCCCEEETTEEEEECTT-------------SCEEEEETTTCCEEEEECC-----CC---EEEEEEETTEEEE
T ss_pred ccccccccCCCcEEECCEEEEEecC-------------cEEEEEECCCCcEEeeccC-----CC---CCCceEECCEEEE
Confidence 223445568888886421 12234476654 465432 11 2345667889998
Q ss_pred EcCCCCCCCcccccceeCcEEEEEcCCCc--eEEeccCCCCCCCccceEEEEECCEEEEEc
Q 013179 250 FGGHGTGGWLSRYDIYYNDTIILDRLSAQ--WKRLPIGNEPPPARAYHSMTCLGSLYLLFG 308 (448)
Q Consensus 250 ~GG~~~~~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~i~v~G 308 (448)
.... ..+++||+.+.+ |+.-... .+...+.+..++.||+..
T Consensus 283 ~~~~-------------g~l~~~d~~tG~~~w~~~~~~-----~~~~~~~~~~~~~l~v~~ 325 (376)
T 3q7m_A 283 VDQN-------------DRVMALTIDGGVTLWTQSDLL-----HRLLTSPVLYNGNLVVGD 325 (376)
T ss_dssp EETT-------------CCEEEEETTTCCEEEEECTTT-----TSCCCCCEEETTEEEEEC
T ss_pred EcCC-------------CeEEEEECCCCcEEEeecccC-----CCcccCCEEECCEEEEEe
Confidence 7531 358999988765 7653111 222334455678887754
No 37
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.73 E-value=0.25 Score=43.98 Aligned_cols=222 Identities=10% Similarity=-0.038 Sum_probs=109.3
Q ss_pred cEEEEECCcEEEE-EcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCC
Q 013179 23 HSAVNIGKSKVVV-FGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRR 100 (448)
Q Consensus 23 ~~~~~~~~~~iyv-~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~ 100 (448)
+.+++..++.+|+ .... ...+.+||+.+......... ....-++++.. +++||+... .
T Consensus 27 ~~i~~~~~g~l~v~~~~~-----~~~i~~~~~~~~~~~~~~~~----------~~~~p~~i~~~~~g~l~v~~~-~---- 86 (270)
T 1rwi_B 27 SGVAVDSAGNVYVTSEGM-----YGRVVKLATGSTGTTVLPFN----------GLYQPQGLAVDGAGTVYVTDF-N---- 86 (270)
T ss_dssp EEEEECTTCCEEEEECSS-----SCEEEEECC-----EECCCC----------SCCSCCCEEECTTCCEEEEET-T----
T ss_pred cceEECCCCCEEEEccCC-----CCcEEEecCCCcccceEeeC----------CcCCcceeEECCCCCEEEEcC-C----
Confidence 4444446678888 5332 23588888877664443211 11112334443 567888754 2
Q ss_pred CCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCC
Q 013179 101 LGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCG 180 (448)
Q Consensus 101 ~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~ 180 (448)
..+.+||+.+.....+.. .....-+.++...++++|+.... ...+++|+..+......... .. ..-
T Consensus 87 -~~i~~~d~~~~~~~~~~~----~~~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~-~~---~~p 152 (270)
T 1rwi_B 87 -NRVVTLAAGSNNQTVLPF----DGLNYPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQTVLPFT-GL---NDP 152 (270)
T ss_dssp -TEEEEECTTCSCCEECCC----CSCSSEEEEEECTTCCEEEEEGG-----GTEEEEECTTCCSCEECCCC-SC---CSC
T ss_pred -CEEEEEeCCCceEeeeec----CCcCCCcceEECCCCCEEEEECC-----CCEEEEEECCCceeEeeccc-cC---CCc
Confidence 358999998876554431 11122234444456688887532 23588888766554433211 11 111
Q ss_pred ceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEe-CCEEEEEcCCCCCCC
Q 013179 181 HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG-GHYLLLFGGHGTGGW 258 (448)
Q Consensus 181 ~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~ 258 (448)
..++.. ++++|+..... ..+..||+.+..-...... .. ..-.++++. ++.||+....+
T Consensus 153 ~~i~~~~~g~l~v~~~~~------------~~i~~~~~~~~~~~~~~~~-~~---~~p~~i~~d~~g~l~v~~~~~---- 212 (270)
T 1rwi_B 153 DGVAVDNSGNVYVTDTDN------------NRVVKLEAESNNQVVLPFT-DI---TAPWGIAVDEAGTVYVTEHNT---- 212 (270)
T ss_dssp CCEEECTTCCEEEEEGGG------------TEEEEECTTTCCEEECCCS-SC---CSEEEEEECTTCCEEEEETTT----
T ss_pred eeEEEeCCCCEEEEECCC------------CEEEEEecCCCceEeeccc-CC---CCceEEEECCCCCEEEEECCC----
Confidence 233333 56788765421 2344567776654433211 11 222344443 45888875322
Q ss_pred cccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEE-CCEEEEEccC
Q 013179 259 LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGF 310 (448)
Q Consensus 259 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG~ 310 (448)
+.+++||+.+..-....... ...-.+++.- ++++|+....
T Consensus 213 --------~~v~~~~~~~~~~~~~~~~~----~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 213 --------NQVVKLLAGSTTSTVLPFTG----LNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp --------SCEEEECTTCSCCEECCCCS----CSCEEEEEECTTCCEEEEEGG
T ss_pred --------CcEEEEcCCCCcceeeccCC----CCCceeEEECCCCCEEEEECC
Confidence 45899998776543322111 1122333332 4678877653
No 38
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.70 E-value=0.33 Score=43.71 Aligned_cols=220 Identities=10% Similarity=-0.041 Sum_probs=111.5
Q ss_pred EEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCCC
Q 013179 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLG 102 (448)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~~ 102 (448)
.+++..++.+|+..... ..+++||+. ++...+... .....-++++.. +++||+.... ..
T Consensus 61 ~i~~~~~g~l~v~~~~~-----~~i~~~~~~-g~~~~~~~~---------~~~~~~~~i~~~~~g~l~v~~~~-----~~ 120 (299)
T 2z2n_A 61 CLTISSDGEVWFTENAA-----NKIGRITKK-GIIKEYTLP---------NPDSAPYGITEGPNGDIWFTEMN-----GN 120 (299)
T ss_dssp EEEECTTSCEEEEETTT-----TEEEEECTT-SCEEEEECS---------STTCCEEEEEECTTSCEEEEETT-----TT
T ss_pred eEEECCCCCEEEeCCCC-----CeEEEECCC-CcEEEEeCC---------CcCCCceeeEECCCCCEEEEecC-----Cc
Confidence 33334556777764321 348888886 555544311 011222344444 5688887532 23
Q ss_pred cEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCce
Q 013179 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHT 182 (448)
Q Consensus 103 ~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~ 182 (448)
.++++|+ +++....... .....-+.++...++.+|+.... ...+++||+ +.+...+...... ..-..
T Consensus 121 ~i~~~d~-~g~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~---~~~~~ 187 (299)
T 2z2n_A 121 RIGRITD-DGKIREYELP---NKGSYPSFITLGSDNALWFTENQ-----NNAIGRITE-SGDITEFKIPTPA---SGPVG 187 (299)
T ss_dssp EEEEECT-TCCEEEEECS---STTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSSTT---CCEEE
T ss_pred eEEEECC-CCCEEEecCC---CCCCCCceEEEcCCCCEEEEeCC-----CCEEEEEcC-CCcEEEeeCCCCC---Cccee
Confidence 5889999 6666655421 11222234444456788886521 245899999 7777765311111 11122
Q ss_pred eEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCcc
Q 013179 183 ATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLS 260 (448)
Q Consensus 183 ~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~ 260 (448)
++.. ++.+|+..... ..+..||+ +.+......+. + ...-.+++. .++.||+.....
T Consensus 188 i~~~~~g~l~v~~~~~------------~~i~~~~~-~g~~~~~~~~~--~-~~~~~~i~~~~~g~l~v~~~~~------ 245 (299)
T 2z2n_A 188 ITKGNDDALWFVEIIG------------NKIGRITT-SGEITEFKIPT--P-NARPHAITAGAGIDLWFTEWGA------ 245 (299)
T ss_dssp EEECTTSSEEEEETTT------------TEEEEECT-TCCEEEEECSS--T-TCCEEEEEECSTTCEEEEETTT------
T ss_pred EEECCCCCEEEEccCC------------ceEEEECC-CCcEEEEECCC--C-CCCceeEEECCCCCEEEeccCC------
Confidence 3333 46777764321 23445687 66666553211 1 112234444 356788764211
Q ss_pred cccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEc
Q 013179 261 RYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFG 308 (448)
Q Consensus 261 ~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~G 308 (448)
+.+++||+ +.+...+..... ...-.+++.-++++|+..
T Consensus 246 ------~~i~~~d~-~g~~~~~~~~~~---~~~~~~i~~~~g~l~v~~ 283 (299)
T 2z2n_A 246 ------NKIGRLTS-NNIIEEYPIQIK---SAEPHGICFDGETIWFAM 283 (299)
T ss_dssp ------TEEEEEET-TTEEEEEECSSS---SCCEEEEEECSSCEEEEE
T ss_pred ------ceEEEECC-CCceEEEeCCCC---CCccceEEecCCCEEEEe
Confidence 45899998 445544432111 112233334456777764
No 39
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.63 E-value=0.37 Score=43.38 Aligned_cols=230 Identities=9% Similarity=0.031 Sum_probs=115.0
Q ss_pred EEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEE--ECCeEEEEcccCCCCCC
Q 013179 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA--IDCHMFIFGGRFGSRRL 101 (448)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~--~~~~lyv~GG~~~~~~~ 101 (448)
.+++..++.+|+.... ...+.+||+....-..+...+. .......-+.++. -+++||+.+... .
T Consensus 34 ~v~~~~~g~l~v~~~~-----~~~i~~~d~~g~~~~~~~~~~~-----~~~~~~~p~~i~~~~~~g~l~v~~~~~----~ 99 (286)
T 1q7f_A 34 GVAVNAQNDIIVADTN-----NHRIQIFDKEGRFKFQFGECGK-----RDSQLLYPNRVAVVRNSGDIIVTERSP----T 99 (286)
T ss_dssp EEEECTTCCEEEEEGG-----GTEEEEECTTSCEEEEECCBSS-----STTCBSSEEEEEEETTTTEEEEEECGG----G
T ss_pred eEEECCCCCEEEEECC-----CCEEEEECCCCcEEEEecccCC-----CcccccCceEEEEEcCCCeEEEEcCCC----C
Confidence 3334455778887543 2358899988554444332110 0001112234444 257898886321 1
Q ss_pred CcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCc
Q 013179 102 GDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH 181 (448)
Q Consensus 102 ~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~ 181 (448)
..+.+||+....-..+.. +....-+.+++..++++|+.... ...+++||+.......+...+....+ .
T Consensus 100 ~~i~~~d~~g~~~~~~~~----~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~~~~~~p---~ 167 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFGA----TILQHPRGVTVDNKGRIIVVECK-----VMRVIIFDQNGNVLHKFGCSKHLEFP---N 167 (286)
T ss_dssp CEEEEECTTSCEEEEECT----TTCSCEEEEEECTTSCEEEEETT-----TTEEEEECTTSCEEEEEECTTTCSSE---E
T ss_pred CEEEEECCCCcEEEEecC----ccCCCceEEEEeCCCCEEEEECC-----CCEEEEEcCCCCEEEEeCCCCccCCc---E
Confidence 358899965544333321 11122234445456788887542 24589999776555444311111111 2
Q ss_pred eeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCc
Q 013179 182 TATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWL 259 (448)
Q Consensus 182 ~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~ 259 (448)
.++.. ++.+|+..... ..+..||+.......+...+.. ..-.++++ .++.||+....+.
T Consensus 168 ~i~~~~~g~l~v~~~~~------------~~i~~~~~~g~~~~~~~~~g~~---~~p~~i~~d~~G~l~v~~~~~~---- 228 (286)
T 1q7f_A 168 GVVVNDKQEIFISDNRA------------HCVKVFNYEGQYLRQIGGEGIT---NYPIGVGINSNGEILIADNHNN---- 228 (286)
T ss_dssp EEEECSSSEEEEEEGGG------------TEEEEEETTCCEEEEESCTTTS---CSEEEEEECTTCCEEEEECSSS----
T ss_pred EEEECCCCCEEEEECCC------------CEEEEEcCCCCEEEEEccCCcc---CCCcEEEECCCCCEEEEeCCCC----
Confidence 23333 57888865431 3345567766554555432211 11224444 3568888764321
Q ss_pred ccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEE-CCEEEEEc
Q 013179 260 SRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (448)
Q Consensus 260 ~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~G 308 (448)
..+.+||+....-..+..... .. .-++++.- ++++|+..
T Consensus 229 -------~~i~~~~~~g~~~~~~~~~~~--~~-~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 229 -------FNLTIFTQDGQLISALESKVK--HA-QCFDVALMDDGSVVLAS 268 (286)
T ss_dssp -------CEEEEECTTSCEEEEEEESSC--CS-CEEEEEEETTTEEEEEE
T ss_pred -------EEEEEECCCCCEEEEEcccCC--CC-cceeEEECCCCcEEEEC
Confidence 158899977655444443211 11 12233333 57888874
No 40
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.62 E-value=0.15 Score=49.39 Aligned_cols=205 Identities=12% Similarity=0.070 Sum_probs=107.5
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCe-EEEEcccCCCCCCCcEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCH-MFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~-lyv~GG~~~~~~~~~~~~~ 107 (448)
.+++.+++++.+++ ...++++|+.+++...+... + ......+..-+++ |++.+...+ ...++.+
T Consensus 188 pdg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~~---------~-~~~~~~~~spdg~~la~~~~~~g---~~~i~~~ 252 (415)
T 2hqs_A 188 PDGSKLAYVTFESG--RSALVIQTLANGAVRQVASF---------P-RHNGAPAFSPDGSKLAFALSKTG---SLNLYVM 252 (415)
T ss_dssp TTSSEEEEEECTTS--SCEEEEEETTTCCEEEEECC---------S-SCEEEEEECTTSSEEEEEECTTS---SCEEEEE
T ss_pred CCCCEEEEEEecCC--CcEEEEEECCCCcEEEeecC---------C-CcccCEEEcCCCCEEEEEEecCC---CceEEEE
Confidence 34556666665432 25799999999887665421 1 1112222222444 554444322 2469999
Q ss_pred ECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe-
Q 013179 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (448)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~- 186 (448)
|+.+++...+.. .+ ......+...+++.+++++.... ...++.+|+.+.+-..+.. . ..........
T Consensus 253 d~~~~~~~~l~~---~~--~~~~~~~~spdg~~l~~~s~~~g--~~~i~~~d~~~~~~~~l~~---~--~~~~~~~~~sp 320 (415)
T 2hqs_A 253 DLASGQIRQVTD---GR--SNNTEPTWFPDSQNLAFTSDQAG--RPQVYKVNINGGAPQRITW---E--GSQNQDADVSS 320 (415)
T ss_dssp ETTTCCEEECCC---CS--SCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTSSCCEECCC---S--SSEEEEEEECT
T ss_pred ECCCCCEEeCcC---CC--CcccceEECCCCCEEEEEECCCC--CcEEEEEECCCCCEEEEec---C--CCcccCeEECC
Confidence 999988766542 11 11122233345554444442211 2468999998887655531 1 1111122222
Q ss_pred CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCcccccce
Q 013179 187 EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIY 265 (448)
Q Consensus 187 ~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~ 265 (448)
+++.+++++..... ..+..+|+++.+...+.. .. ...+.+. -+++.+++++....
T Consensus 321 dG~~l~~~~~~~g~---------~~i~~~d~~~~~~~~l~~---~~---~~~~~~~spdg~~l~~~s~~~~--------- 376 (415)
T 2hqs_A 321 DGKFMVMVSSNGGQ---------QHIAKQDLATGGVQVLSS---TF---LDETPSLAPNGTMVIYSSSQGM--------- 376 (415)
T ss_dssp TSSEEEEEEECSSC---------EEEEEEETTTCCEEECCC---SS---SCEEEEECTTSSEEEEEEEETT---------
T ss_pred CCCEEEEEECcCCc---------eEEEEEECCCCCEEEecC---CC---CcCCeEEcCCCCEEEEEEcCCC---------
Confidence 45555555443211 334556888888766542 11 1223333 35565666553321
Q ss_pred eCcEEEEEcCCCceEEecc
Q 013179 266 YNDTIILDRLSAQWKRLPI 284 (448)
Q Consensus 266 ~~~v~~yd~~~~~W~~~~~ 284 (448)
...+|++|+.......+..
T Consensus 377 ~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 377 GSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp EEEEEEEETTSCCEEECCC
T ss_pred ccEEEEEECCCCcEEEeeC
Confidence 2379999998887777654
No 41
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.59 E-value=0.5 Score=44.56 Aligned_cols=196 Identities=11% Similarity=0.033 Sum_probs=103.6
Q ss_pred CceEEEEcCCCc--EEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCc--EEEeecCC
Q 013179 46 SDVVVYDIDNKL--WFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQ--WSELTSFG 121 (448)
Q Consensus 46 ~~~~~yd~~~~~--W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~~~~ 121 (448)
..++.||+.+++ |+.-... +....+...+.+..++.+|+ |... ..+..+|+.+++ |+.-..
T Consensus 153 g~l~~~d~~tG~~~W~~~~~~-------~~~~~~~~~~~~~~~~~v~~-g~~~-----g~l~~~d~~tG~~~w~~~~~-- 217 (376)
T 3q7m_A 153 GQLQALNEADGAVKWTVNLDM-------PSLSLRGESAPTTAFGAAVV-GGDN-----GRVSAVLMEQGQMIWQQRIS-- 217 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC------------CCCCCCEEETTEEEE-CCTT-----TEEEEEETTTCCEEEEEECC--
T ss_pred CeEEEEECCCCcEEEEEeCCC-------CceeecCCCCcEEECCEEEE-EcCC-----CEEEEEECCCCcEEEEEecc--
Confidence 359999998875 8654311 11111222344555777766 3222 358999998764 665432
Q ss_pred CCCCcC--------cccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc--eEeecCCCCCCCccCCceeEEeCCEEE
Q 013179 122 DLPSPR--------DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLPVTGSVPPPRCGHTATMVEKRLL 191 (448)
Q Consensus 122 ~~p~~r--------~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~p~~r~~~~~~~~~~~ly 191 (448)
.|... .....++. ++.+|+.+. -..++.+|+.+++ |+.-. +. ....+..++.+|
T Consensus 218 -~~~~~~~~~~~~~~~~~p~~~-~~~v~~~~~------~g~l~~~d~~tG~~~w~~~~-----~~---~~~~~~~~~~l~ 281 (376)
T 3q7m_A 218 -QATGSTEIDRLSDVDTTPVVV-NGVVFALAY------NGNLTALDLRSGQIMWKREL-----GS---VNDFIVDGNRIY 281 (376)
T ss_dssp -C-----------CCCCCCEEE-TTEEEEECT------TSCEEEEETTTCCEEEEECC-----CC---EEEEEEETTEEE
T ss_pred -cCCCCcccccccccCCCcEEE-CCEEEEEec------CcEEEEEECCCCcEEeeccC-----CC---CCCceEECCEEE
Confidence 11111 11222333 458887542 2358999988764 66432 11 123455688888
Q ss_pred EEcccCCCCCccCceeeecccccccCCCCc--eEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCcccccceeCcE
Q 013179 192 IYGGRGGGGPIMGDLWALKGLIEEENETPG--WTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDT 269 (448)
Q Consensus 192 v~GG~~~~~~~~~d~~~~~~~~~yd~~~~~--W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v 269 (448)
+.... ..+..+|+++.+ |+.-.. ..+...+.++.++.||+.... ..+
T Consensus 282 ~~~~~-------------g~l~~~d~~tG~~~w~~~~~-----~~~~~~~~~~~~~~l~v~~~~-------------g~l 330 (376)
T 3q7m_A 282 LVDQN-------------DRVMALTIDGGVTLWTQSDL-----LHRLLTSPVLYNGNLVVGDSE-------------GYL 330 (376)
T ss_dssp EEETT-------------CCEEEEETTTCCEEEEECTT-----TTSCCCCCEEETTEEEEECTT-------------SEE
T ss_pred EEcCC-------------CeEEEEECCCCcEEEeeccc-----CCCcccCCEEECCEEEEEeCC-------------CeE
Confidence 87532 123344766554 665321 122233445578888876421 359
Q ss_pred EEEEcCCCc--eEEeccCCCCCCCccceEEEEECCEEEEEc
Q 013179 270 IILDRLSAQ--WKRLPIGNEPPPARAYHSMTCLGSLYLLFG 308 (448)
Q Consensus 270 ~~yd~~~~~--W~~~~~~~~~p~~r~~~~~~~~~~~i~v~G 308 (448)
++||+.+.+ |+.-... .......+..+++||+..
T Consensus 331 ~~~d~~tG~~~~~~~~~~-----~~~~~~~~~~~~~l~v~~ 366 (376)
T 3q7m_A 331 HWINVEDGRFVAQQKVDS-----SGFQTEPVAADGKLLIQA 366 (376)
T ss_dssp EEEETTTCCEEEEEECCT-----TCBCSCCEEETTEEEEEB
T ss_pred EEEECCCCcEEEEEecCC-----CcceeCCEEECCEEEEEe
Confidence 999998775 5432211 122333445688887754
No 42
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.56 E-value=0.47 Score=43.82 Aligned_cols=220 Identities=10% Similarity=0.074 Sum_probs=106.7
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEEC
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDT 109 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~ 109 (448)
++.+++.|+.+ ..+.++|+.+++-...-.. ........++.-+++.++.|+.++ .+..||.
T Consensus 91 ~~~~l~s~s~D-----~~i~lWd~~~~~~~~~~~~---------~~~~~~~~~~spdg~~l~~g~~dg-----~v~i~~~ 151 (321)
T 3ow8_A 91 TLPIAASSSLD-----AHIRLWDLENGKQIKSIDA---------GPVDAWTLAFSPDSQYLATGTHVG-----KVNIFGV 151 (321)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEEC---------CTTCCCCEEECTTSSEEEEECTTS-----EEEEEET
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCCEEEEEeC---------CCccEEEEEECCCCCEEEEEcCCC-----cEEEEEc
Confidence 34566666654 3488899988764322111 111111222233566777776543 4788888
Q ss_pred CCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe-CC
Q 013179 110 DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EK 188 (448)
Q Consensus 110 ~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~ 188 (448)
.+.+-..... .......+++...+++.++.|+.++ .+..||+.+.+-...- . ....+ -.++... ++
T Consensus 152 ~~~~~~~~~~----~~~~~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~~~~~~~-~-~h~~~--v~~l~~spd~ 218 (321)
T 3ow8_A 152 ESGKKEYSLD----TRGKFILSIAYSPDGKYLASGAIDG-----IINIFDIATGKLLHTL-E-GHAMP--IRSLTFSPDS 218 (321)
T ss_dssp TTCSEEEEEE----CSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEE-C-CCSSC--CCEEEECTTS
T ss_pred CCCceeEEec----CCCceEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcEEEEE-c-ccCCc--eeEEEEcCCC
Confidence 8776433221 1111223333345667777887654 4788998877543321 0 11111 1123333 56
Q ss_pred EEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCcccccceeC
Q 013179 189 RLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIYYN 267 (448)
Q Consensus 189 ~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~ 267 (448)
++++.|+.++ .+..||..+......- .+ . ...-.+++. -++..++.|+.+ .
T Consensus 219 ~~l~s~s~dg------------~i~iwd~~~~~~~~~~-~~--h-~~~v~~~~~sp~~~~l~s~s~D------------~ 270 (321)
T 3ow8_A 219 QLLVTASDDG------------YIKIYDVQHANLAGTL-SG--H-ASWVLNVAFCPDDTHFVSSSSD------------K 270 (321)
T ss_dssp CEEEEECTTS------------CEEEEETTTCCEEEEE-CC--C-SSCEEEEEECTTSSEEEEEETT------------S
T ss_pred CEEEEEcCCC------------eEEEEECCCcceeEEE-cC--C-CCceEEEEECCCCCEEEEEeCC------------C
Confidence 6777776543 2334566655443221 01 1 111112333 245666666644 3
Q ss_pred cEEEEEcCCCceEEeccCCCCCCCccceEEEEE-CCEEEEEccCCCC
Q 013179 268 DTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (448)
Q Consensus 268 ~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~ 313 (448)
.+.++|+.+.+-...-.. ... .-.++... +++.++.||.++.
T Consensus 271 ~v~iwd~~~~~~~~~~~~---h~~-~v~~v~~s~~g~~l~s~~~d~~ 313 (321)
T 3ow8_A 271 SVKVWDVGTRTCVHTFFD---HQD-QVWGVKYNGNGSKIVSVGDDQE 313 (321)
T ss_dssp CEEEEETTTTEEEEEECC---CSS-CEEEEEECTTSSEEEEEETTCC
T ss_pred cEEEEeCCCCEEEEEEcC---CCC-cEEEEEECCCCCEEEEEeCCCe
Confidence 488889876653322111 111 12222222 4567777776653
No 43
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.54 E-value=0.24 Score=47.82 Aligned_cols=213 Identities=10% Similarity=0.028 Sum_probs=108.6
Q ss_pred CceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCC
Q 013179 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPS 125 (448)
Q Consensus 46 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~ 125 (448)
..++.+|.....-..+... .......+..-+++.+++++..+. ...++.+|+.+++...+.. .+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~----------~~~v~~~~~Spdg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~---~~~ 223 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS----------PQPLMSPAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQVAS---FPR 223 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE----------SSCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTTCCEEEEEC---CSS
T ss_pred ceEEEEcCCCCCCEEEeCC----------CCcceeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCcEEEeec---CCC
Confidence 5789999887655544321 111222223335666666665432 2469999999998877653 211
Q ss_pred cCcccEEEEECCcE-EEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe-CCEEEEEcccCCCCCcc
Q 013179 126 PRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIM 203 (448)
Q Consensus 126 ~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~ 203 (448)
...+.+...+++ |++.+..++ ...++.+|+.+.+...+. ..+. ........ +++.+++++.....
T Consensus 224 --~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~~~~~l~---~~~~--~~~~~~~spdg~~l~~~s~~~g~--- 290 (415)
T 2hqs_A 224 --HNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASGQIRQVT---DGRS--NNTEPTWFPDSQNLAFTSDQAGR--- 290 (415)
T ss_dssp --CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCCEEECC---CCSS--CEEEEEECTTSSEEEEEECTTSS---
T ss_pred --cccCEEEcCCCCEEEEEEecCC---CceEEEEECCCCCEEeCc---CCCC--cccceEECCCCCEEEEEECCCCC---
Confidence 222333334444 554554333 246999999988877664 2111 11122222 45544454432211
Q ss_pred CceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEe
Q 013179 204 GDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRL 282 (448)
Q Consensus 204 ~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 282 (448)
..++.+|+.+..-..+... .....+++. -+++.+++++.... ...++++|+.+.+...+
T Consensus 291 ------~~i~~~d~~~~~~~~l~~~-----~~~~~~~~~spdG~~l~~~~~~~g---------~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 291 ------PQVYKVNINGGAPQRITWE-----GSQNQDADVSSDGKFMVMVSSNGG---------QQHIAKQDLATGGVQVL 350 (415)
T ss_dssp ------CEEEEEETTSSCCEECCCS-----SSEEEEEEECTTSSEEEEEEECSS---------CEEEEEEETTTCCEEEC
T ss_pred ------cEEEEEECCCCCEEEEecC-----CCcccCeEECCCCCEEEEEECcCC---------ceEEEEEECCCCCEEEe
Confidence 2234457777665554321 122223333 34454555443221 14699999999888765
Q ss_pred ccCCCCCCCccceEEEEECCEEEEEccCC
Q 013179 283 PIGNEPPPARAYHSMTCLGSLYLLFGGFD 311 (448)
Q Consensus 283 ~~~~~~p~~r~~~~~~~~~~~i~v~GG~~ 311 (448)
... ......+..-+++.+++++.+
T Consensus 351 ~~~-----~~~~~~~~spdg~~l~~~s~~ 374 (415)
T 2hqs_A 351 SST-----FLDETPSLAPNGTMVIYSSSQ 374 (415)
T ss_dssp CCS-----SSCEEEEECTTSSEEEEEEEE
T ss_pred cCC-----CCcCCeEEcCCCCEEEEEEcC
Confidence 442 111222222246666666544
No 44
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.52 E-value=0.18 Score=47.11 Aligned_cols=109 Identities=8% Similarity=0.040 Sum_probs=62.3
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEE-EC--CeEEEEcccCCCCCCCcEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-ID--CHMFIFGGRFGSRRLGDFW 105 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~-~~--~~lyv~GG~~~~~~~~~~~ 105 (448)
.++..++.|+.++ .+.+||+....+..+.... ...... .++.. .+ +.+++.|+.++ .+.
T Consensus 21 ~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~-------~h~~~v-~~~~~~~~~~~~~l~s~~~dg-----~v~ 82 (379)
T 3jrp_A 21 YYGKRLATCSSDK-----TIKIFEVEGETHKLIDTLT-------GHEGPV-WRVDWAHPKFGTILASCSYDG-----KVL 82 (379)
T ss_dssp SSSSEEEEEETTS-----CEEEEEEETTEEEEEEEEC-------CCSSCE-EEEEECCGGGCSEEEEEETTS-----CEE
T ss_pred CCCCEEEEEECCC-----cEEEEecCCCcceeeeEec-------CCCCcE-EEEEeCCCCCCCEEEEeccCC-----EEE
Confidence 4566777777543 4888888877776654331 111111 22222 22 56777777653 488
Q ss_pred EEECCCCcEEEeecCCCCCCcCcc-cEEEEECC--cEEEEEecCCCCccCCceEEEeCCCC
Q 013179 106 VLDTDIWQWSELTSFGDLPSPRDF-AAASAIGN--RKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 106 ~~d~~t~~W~~~~~~~~~p~~r~~-~~~~~~~~--~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
.+|+.+++|..+.. ....... .+++...+ +.+++.|+.++ .+..||+.+.
T Consensus 83 iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~ 135 (379)
T 3jrp_A 83 IWKEENGRWSQIAV---HAVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 135 (379)
T ss_dssp EEEEETTEEEEEEE---ECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTT
T ss_pred EEEcCCCceeEeee---ecCCCcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCC
Confidence 89999998877664 2222222 22333333 46777776543 4778887765
No 45
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.52 E-value=0.24 Score=52.27 Aligned_cols=228 Identities=13% Similarity=0.014 Sum_probs=116.1
Q ss_pred EEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCC-CCCCCCcceeEEEE-CCe-EEEEcccCCCCCCC
Q 013179 26 VNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQ-VGPGPRAFHIAVAI-DCH-MFIFGGRFGSRRLG 102 (448)
Q Consensus 26 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~-~~p~~R~~h~~~~~-~~~-lyv~GG~~~~~~~~ 102 (448)
+...++.|++ |... .-+..||+.++++......... .. .++ ...-.+++.. +++ |+|- ... .
T Consensus 363 ~~d~~g~lWi-Gt~~-----~Gl~~~~~~~~~~~~~~~~~~~--~~~~l~-~~~v~~i~~d~~g~~lWig-t~~-----~ 427 (795)
T 4a2l_A 363 VEDKDKNLWI-GTND-----GGLNLYNPITQRFTSYTLQEDE--SARGIG-SNNIKAVYVDEKKSLVYIG-THA-----G 427 (795)
T ss_dssp EECTTSCEEE-EESS-----SCEEEECTTTCCEEEECCC--------CCS-CSCEEEEEEETTTTEEEEE-ETT-----T
T ss_pred EECCCCCEEE-EECC-----CCeEEEcCCCCcEEEEecCCCC--cccCCC-CccEEEEEEcCCCCEEEEE-eCc-----C
Confidence 3345566776 3221 2388899999888776432100 00 011 1223344444 456 6663 221 2
Q ss_pred cEEEEECCCCcEEEeecCC-CCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccC-C
Q 013179 103 DFWVLDTDIWQWSELTSFG-DLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRC-G 180 (448)
Q Consensus 103 ~~~~~d~~t~~W~~~~~~~-~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~-~ 180 (448)
.+++||+.++++..+.... .++. ..-.+.+...++.|++-.. +.+++||+.+++|+.+.... .+.... .
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~-~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~-~~~~~~~~ 498 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVN-ENVYAILPDGEGNLWLGTL-------SALVRFNPEQRSFTTIEKEK-DGTPVVSK 498 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSC-SCEEEEEECSSSCEEEEES-------SCEEEEETTTTEEEECCBCT-TCCBCCCC
T ss_pred ceeEEeCCCCcEEEeecCCCCcCC-CeeEEEEECCCCCEEEEec-------CceeEEeCCCCeEEEccccc-cccccCCc
Confidence 4899999999988876411 1111 1223333334567877542 35999999999998875220 011111 1
Q ss_pred --ceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecC---CCCCCCCCceeEEEE-eCCEEEEEcCC
Q 013179 181 --HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKL---PGQAPSSRCGHTITS-GGHYLLLFGGH 253 (448)
Q Consensus 181 --~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~---~g~~p~~r~~~~~~~-~~~~i~v~GG~ 253 (448)
.++... ++.|++-.. . + +..||+.+.++ .... ...++.. .-.+++. .++.|++-..
T Consensus 499 ~i~~i~~d~~g~lWigt~-~--G-----------l~~~~~~~~~~-~~~~~~~~~~l~~~-~i~~i~~d~~g~lWigT~- 561 (795)
T 4a2l_A 499 QITTLFRDSHKRLWIGGE-E--G-----------LSVFKQEGLDI-QKASILPVSNVTKL-FTNCIYEASNGIIWVGTR- 561 (795)
T ss_dssp CEEEEEECTTCCEEEEES-S--C-----------EEEEEEETTEE-EECCCSCSCGGGGS-CEEEEEECTTSCEEEEES-
T ss_pred eEEEEEECCCCCEEEEeC-C--c-----------eEEEeCCCCeE-EEecCCCCCCCCCC-eeEEEEECCCCCEEEEeC-
Confidence 122222 466776432 1 1 23457777777 4321 0011111 1123333 3567777432
Q ss_pred CCCCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEE-CCEEEEEc
Q 013179 254 GTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (448)
Q Consensus 254 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~G 308 (448)
..+++||+.+.++.........|... ..+++.- ++.|++.+
T Consensus 562 -------------~Gl~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t 603 (795)
T 4a2l_A 562 -------------EGFYCFNEKDKQIKRYNTTNGLPNNV-VYGILEDSFGRLWLST 603 (795)
T ss_dssp -------------SCEEEEETTTTEEEEECGGGTCSCSC-EEEEEECTTSCEEEEE
T ss_pred -------------CCceeECCCCCcEEEeCCCCCCchhh-eEEEEECCCCCEEEEc
Confidence 13899999999888875543334332 2333332 46676655
No 46
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.47 E-value=0.46 Score=42.68 Aligned_cols=220 Identities=13% Similarity=0.031 Sum_probs=114.2
Q ss_pred cEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCC
Q 013179 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRL 101 (448)
Q Consensus 23 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~ 101 (448)
++++...++.+|+.... ...+..||+. ++........ ....-++++.. ++.+|+.....
T Consensus 18 ~~i~~d~~g~l~v~~~~-----~~~v~~~d~~-~~~~~~~~~~---------~~~~~~~i~~~~~g~l~v~~~~~----- 77 (299)
T 2z2n_A 18 YGITVSDKGKVWITQHK-----ANMISCINLD-GKITEYPLPT---------PDAKVMCLTISSDGEVWFTENAA----- 77 (299)
T ss_dssp EEEEECTTSCEEEEETT-----TTEEEEECTT-CCEEEEECSS---------TTCCEEEEEECTTSCEEEEETTT-----
T ss_pred cceEECCCCCEEEEecC-----CCcEEEEcCC-CCeEEecCCc---------ccCceeeEEECCCCCEEEeCCCC-----
Confidence 44444566788875432 1358999998 7776654210 11222334332 56788874322
Q ss_pred CcEEEEECCCCcEEEeecCCCCC-CcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCC
Q 013179 102 GDFWVLDTDIWQWSELTSFGDLP-SPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCG 180 (448)
Q Consensus 102 ~~~~~~d~~t~~W~~~~~~~~~p-~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~ 180 (448)
..+++||+. ++...+. .| ....-+.++...++.+|+.... -..+++||+ +.+...+.... ....-
T Consensus 78 ~~i~~~~~~-g~~~~~~----~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~---~~~~~ 143 (299)
T 2z2n_A 78 NKIGRITKK-GIIKEYT----LPNPDSAPYGITEGPNGDIWFTEMN-----GNRIGRITD-DGKIREYELPN---KGSYP 143 (299)
T ss_dssp TEEEEECTT-SCEEEEE----CSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSS---TTCCE
T ss_pred CeEEEECCC-CcEEEEe----CCCcCCCceeeEECCCCCEEEEecC-----CceEEEECC-CCCEEEecCCC---CCCCC
Confidence 248899986 5555554 22 1222344444456788887532 245889998 66666553211 11112
Q ss_pred ceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEe-CCEEEEEcCCCCCCC
Q 013179 181 HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG-GHYLLLFGGHGTGGW 258 (448)
Q Consensus 181 ~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~ 258 (448)
+.++.. ++++|+..... ..+..||+ +.+......... ...-.++++. ++.||+.....
T Consensus 144 ~~i~~~~~g~l~v~~~~~------------~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~~---- 203 (299)
T 2z2n_A 144 SFITLGSDNALWFTENQN------------NAIGRITE-SGDITEFKIPTP---ASGPVGITKGNDDALWFVEIIG---- 203 (299)
T ss_dssp EEEEECTTSCEEEEETTT------------TEEEEECT-TCCEEEEECSST---TCCEEEEEECTTSSEEEEETTT----
T ss_pred ceEEEcCCCCEEEEeCCC------------CEEEEEcC-CCcEEEeeCCCC---CCcceeEEECCCCCEEEEccCC----
Confidence 233333 56788754211 23445577 666665532111 1122244443 46788765321
Q ss_pred cccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEE-CCEEEEEc
Q 013179 259 LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (448)
Q Consensus 259 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~G 308 (448)
+.+++||+ +.+...+.... + ...-.+++.- ++++|+..
T Consensus 204 --------~~i~~~~~-~g~~~~~~~~~--~-~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 204 --------NKIGRITT-SGEITEFKIPT--P-NARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp --------TEEEEECT-TCCEEEEECSS--T-TCCEEEEEECSTTCEEEEE
T ss_pred --------ceEEEECC-CCcEEEEECCC--C-CCCceeEEECCCCCEEEec
Confidence 46899999 77766653221 1 1112233332 46777764
No 47
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.36 E-value=0.64 Score=43.19 Aligned_cols=238 Identities=14% Similarity=0.129 Sum_probs=118.6
Q ss_pred ceEEeeeCCCCCCCCCCCCCcEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCC-ccee
Q 013179 3 YWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPR-AFHI 81 (448)
Q Consensus 3 ~W~~~~~~~~~g~~P~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R-~~h~ 81 (448)
.|+++.. |....-.+.....++.+|++|-. + .++.-+-.-.+|+.+.... +.+. ...+
T Consensus 26 ~W~~~~~-------~~~~~~~~v~~~~~~~~~~~G~~-g-----~i~~s~DgG~tW~~~~~~~--------~~~~~~~~~ 84 (327)
T 2xbg_A 26 PWEAIQL-------PTTATILDMSFIDRHHGWLVGVN-A-----TLMETRDGGQTWEPRTLVL--------DHSDYRFNS 84 (327)
T ss_dssp CEEEEEC-------SCSSCEEEEEESSSSCEEEEETT-T-----EEEEESSTTSSCEECCCCC--------SCCCCEEEE
T ss_pred CceEeec-------CCCCcEEEEEECCCCcEEEEcCC-C-----eEEEeCCCCCCCeECCCCC--------CCCCccEEE
Confidence 5877752 32222223333345678886632 1 2443322345899875321 1111 2334
Q ss_pred EEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCC
Q 013179 82 AVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI 161 (448)
Q Consensus 82 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 161 (448)
+...++.+|+.|- . ..+++-.-.-.+|+.+.....+|. ..+.++...++.+|+.|.. ..+++-+-.
T Consensus 85 i~~~~~~~~~~g~-~-----g~i~~S~DgG~tW~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~------g~v~~S~Dg 150 (327)
T 2xbg_A 85 VSFQGNEGWIVGE-P-----PIMLHTTDGGQSWSQIPLDPKLPG--SPRLIKALGNGSAEMITNV------GAIYRTKDS 150 (327)
T ss_dssp EEEETTEEEEEEE-T-----TEEEEESSTTSSCEECCCCTTCSS--CEEEEEEEETTEEEEEETT------CCEEEESST
T ss_pred EEecCCeEEEEEC-C-----CeEEEECCCCCCceECccccCCCC--CeEEEEEECCCCEEEEeCC------ccEEEEcCC
Confidence 4445678888753 1 134443333568999864211222 2234444455688888742 135554434
Q ss_pred CCceEeecCCCCCCCccCCceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEE
Q 013179 162 SLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTI 240 (448)
Q Consensus 162 t~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~ 240 (448)
-.+|+.+.. +.+..-+.++.. ++.+|++|-. + .++.. -|....+|+.+.. +.+...+.+
T Consensus 151 G~tW~~~~~----~~~~~~~~~~~~~~~~~~~~g~~-G------~~~~S-----~d~gG~tW~~~~~----~~~~~~~~~ 210 (327)
T 2xbg_A 151 GKNWQALVQ----EAIGVMRNLNRSPSGEYVAVSSR-G------SFYST-----WEPGQTAWEPHNR----TTSRRLHNM 210 (327)
T ss_dssp TSSEEEEEC----SCCCCEEEEEECTTSCEEEEETT-S------SEEEE-----ECTTCSSCEEEEC----CSSSCEEEE
T ss_pred CCCCEEeec----CCCcceEEEEEcCCCcEEEEECC-C------cEEEE-----eCCCCCceeECCC----CCCCcccee
Confidence 578999862 122222344433 4566665522 1 12222 1334688998862 233444455
Q ss_pred EE-eCCEEEEEcCCCCCCCcccccceeCcEEEEEcC-CCceEEeccCCCCCCCccceEEEEE-CCEEEEEcc
Q 013179 241 TS-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRL-SAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGG 309 (448)
Q Consensus 241 ~~-~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~-~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG 309 (448)
+. .++.+|+.+.. ..+++.+.+ ..+|+.+..... +.....++++.. ++++|+.|+
T Consensus 211 ~~~~~g~~~~~~~~-------------G~~~~s~~D~G~tW~~~~~~~~-~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 211 GFTPDGRLWMIVNG-------------GKIAFSDPDNSENWGELLSPLR-RNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp EECTTSCEEEEETT-------------TEEEEEETTEEEEECCCBCTTS-SCCSCEEEEEESSSSCEEEEES
T ss_pred EECCCCCEEEEeCC-------------ceEEEecCCCCCeeEeccCCcc-cCCcceEEEEecCCCEEEEEeC
Confidence 54 45678877631 124554333 568988754211 122223334333 568888876
No 48
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.33 E-value=0.54 Score=45.00 Aligned_cols=206 Identities=9% Similarity=-0.059 Sum_probs=101.1
Q ss_pred EEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEE
Q 013179 26 VNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFW 105 (448)
Q Consensus 26 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~ 105 (448)
....++.+++.++.+ ..+.+||+.+++......... ...+.......++.-++++|+.++.+ ..+.
T Consensus 129 ~~s~~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~s~~~d-----~~v~ 194 (433)
T 3bws_A 129 RFIDNTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEK----YKKKLGFVETISIPEHNELWVSQMQA-----NAVH 194 (433)
T ss_dssp EESSSSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHH----HHTTCCEEEEEEEGGGTEEEEEEGGG-----TEEE
T ss_pred EEeCCCeEEEEeCCC-----CeEEEEECCCCeEeeecCccc----ccccCCceeEEEEcCCCEEEEEECCC-----CEEE
Confidence 333356777777643 349999999887654321100 00011111111122367888887754 3589
Q ss_pred EEECCCCcEEEeecCCCCCCcCcccEEEEECC-cEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeE
Q 013179 106 VLDTDIWQWSELTSFGDLPSPRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTAT 184 (448)
Q Consensus 106 ~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~ 184 (448)
++|+.+.+...... . ....-.+++...+ +.+|+.++.++ .+..||+.+.+....- ... ..-..++
T Consensus 195 ~~d~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~l~~~~~~~~-----~i~~~d~~~~~~~~~~---~~~--~~~~~~~ 260 (433)
T 3bws_A 195 VFDLKTLAYKATVD---L-TGKWSKILLYDPIRDLVYCSNWISE-----DISVIDRKTKLEIRKT---DKI--GLPRGLL 260 (433)
T ss_dssp EEETTTCCEEEEEE---C-SSSSEEEEEEETTTTEEEEEETTTT-----EEEEEETTTTEEEEEC---CCC--SEEEEEE
T ss_pred EEECCCceEEEEEc---C-CCCCeeEEEEcCCCCEEEEEecCCC-----cEEEEECCCCcEEEEe---cCC--CCceEEE
Confidence 99998876544321 1 1112233333333 36667664433 5899999887765432 111 1112233
Q ss_pred Ee-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE--eCCEEEEEcCCCCCCCccc
Q 013179 185 MV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSR 261 (448)
Q Consensus 185 ~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~ 261 (448)
.. +++.+++++.........| ..+..||+.+.+-..... .+. ....++. .++.+|+.++.+
T Consensus 261 ~~~~g~~l~~~~~~~~~~~~~d----g~i~~~d~~~~~~~~~~~---~~~--~~~~~~~~~~g~~l~~~~~~~------- 324 (433)
T 3bws_A 261 LSKDGKELYIAQFSASNQESGG----GRLGIYSMDKEKLIDTIG---PPG--NKRHIVSGNTENKIYVSDMCC------- 324 (433)
T ss_dssp ECTTSSEEEEEEEESCTTCSCC----EEEEEEETTTTEEEEEEE---EEE--CEEEEEECSSTTEEEEEETTT-------
T ss_pred EcCCCCEEEEEECCCCccccCC----CeEEEEECCCCcEEeecc---CCC--CcceEEECCCCCEEEEEecCC-------
Confidence 33 4444444443222110011 234566877665433321 111 1112333 244788876543
Q ss_pred ccceeCcEEEEEcCCCceE
Q 013179 262 YDIYYNDTIILDRLSAQWK 280 (448)
Q Consensus 262 ~~~~~~~v~~yd~~~~~W~ 280 (448)
+.+.+||+.+.+-.
T Consensus 325 -----~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 325 -----SKIEVYDLKEKKVQ 338 (433)
T ss_dssp -----TEEEEEETTTTEEE
T ss_pred -----CEEEEEECCCCcEE
Confidence 46899999876543
No 49
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.31 E-value=0.61 Score=42.43 Aligned_cols=194 Identities=12% Similarity=0.131 Sum_probs=94.4
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..++.|+.+ ..+.+||+.+++-...-. ............-++.+++.|+.++ .+..+|
T Consensus 75 ~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~s~~~d~-----~i~iwd 135 (312)
T 4ery_A 75 SDSNLLVSASDD-----KTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGSFDE-----SVRIWD 135 (312)
T ss_dssp TTSSEEEEEETT-----SEEEEEETTTCCEEEEEE---------CCSSCEEEEEECSSSSEEEEEETTS-----CEEEEE
T ss_pred CCCCEEEEECCC-----CEEEEEECCCCcEEEEEc---------CCCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEE
Confidence 445666667653 347888888775322110 1111111222222556777777654 488999
Q ss_pred CCCCcEEEeecCCCCCCcCc-ccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe-
Q 013179 109 TDIWQWSELTSFGDLPSPRD-FAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~-~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~- 186 (448)
+.+.+-...- +.... -.+++...++.+++.|+.++ .+..||+.+.+-...-. ....+. -..+...
T Consensus 136 ~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~--~~~~~~-~~~~~~~~ 202 (312)
T 4ery_A 136 VKTGKCLKTL-----PAHSDPVSAVHFNRDGSLIVSSSYDG-----LCRIWDTASGQCLKTLI--DDDNPP-VSFVKFSP 202 (312)
T ss_dssp TTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEEC--CSSCCC-EEEEEECT
T ss_pred CCCCEEEEEe-----cCCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCceeeEEe--ccCCCc-eEEEEECC
Confidence 9887643322 11111 12222334556777777654 47889988766443211 000111 1112222
Q ss_pred CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCcee-EEEEeCCEEEEEcCCCCCCCcccccce
Q 013179 187 EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGH-TITSGGHYLLLFGGHGTGGWLSRYDIY 265 (448)
Q Consensus 187 ~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~-~~~~~~~~i~v~GG~~~~~~~~~~~~~ 265 (448)
+++.++.|+.++ .+..||..+.+-...- .+......... .....++.+++.|+.+
T Consensus 203 ~~~~l~~~~~d~------------~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~sg~~d----------- 258 (312)
T 4ery_A 203 NGKYILAATLDN------------TLKLWDYSKGKCLKTY-TGHKNEKYCIFANFSVTGGKWIVSGSED----------- 258 (312)
T ss_dssp TSSEEEEEETTT------------EEEEEETTTTEEEEEE-CSSCCSSSCCCEEEECSSSCEEEECCTT-----------
T ss_pred CCCEEEEEcCCC------------eEEEEECCCCcEEEEE-EecCCceEEEEEEEEeCCCcEEEEECCC-----------
Confidence 455666666432 2344566555432221 11111111111 2222456677777654
Q ss_pred eCcEEEEEcCCCce
Q 013179 266 YNDTIILDRLSAQW 279 (448)
Q Consensus 266 ~~~v~~yd~~~~~W 279 (448)
..+.+||+.+.+-
T Consensus 259 -g~i~vwd~~~~~~ 271 (312)
T 4ery_A 259 -NLVYIWNLQTKEI 271 (312)
T ss_dssp -SCEEEEETTTCCE
T ss_pred -CEEEEEECCCchh
Confidence 3588899887653
No 50
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.29 E-value=0.59 Score=43.13 Aligned_cols=221 Identities=13% Similarity=-0.001 Sum_probs=104.6
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECC
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTD 110 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~ 110 (448)
+.+++.|+.++. +.++|..+.+....... .............-++.+++.|+.++ .+..+|+.
T Consensus 48 ~~~l~tgs~D~~-----v~vW~~~~~~~~~~~~l-------~gh~~~v~~~~~~~~~~~l~s~s~D~-----~i~lWd~~ 110 (321)
T 3ow8_A 48 SETVVTGSLDDL-----VKVWKWRDERLDLQWSL-------EGHQLGVVSVDISHTLPIAASSSLDA-----HIRLWDLE 110 (321)
T ss_dssp -CEEEEEETTSC-----EEEEEEETTEEEEEEEE-------CCCSSCEEEEEECSSSSEEEEEETTS-----EEEEEETT
T ss_pred CCEEEEEcCCCC-----EEEEECCCCCeeeeeee-------ccCCCCEEEEEECCCCCEEEEEeCCC-----cEEEEECC
Confidence 457777876543 55666665544322111 01111111111222455667776543 48888998
Q ss_pred CCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe-CCE
Q 013179 111 IWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKR 189 (448)
Q Consensus 111 t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~ 189 (448)
+.+-...... .+. ...+++...++..++.|+.++ .+..||..+.+-...- .. ....-.+++.. +++
T Consensus 111 ~~~~~~~~~~--~~~--~~~~~~~spdg~~l~~g~~dg-----~v~i~~~~~~~~~~~~---~~-~~~~v~~~~~spdg~ 177 (321)
T 3ow8_A 111 NGKQIKSIDA--GPV--DAWTLAFSPDSQYLATGTHVG-----KVNIFGVESGKKEYSL---DT-RGKFILSIAYSPDGK 177 (321)
T ss_dssp TTEEEEEEEC--CTT--CCCCEEECTTSSEEEEECTTS-----EEEEEETTTCSEEEEE---EC-SSSCEEEEEECTTSS
T ss_pred CCCEEEEEeC--CCc--cEEEEEECCCCCEEEEEcCCC-----cEEEEEcCCCceeEEe---cC-CCceEEEEEECCCCC
Confidence 8765433221 111 122344445667777776543 3778887766533221 00 11111122222 566
Q ss_pred EEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCcccccceeCc
Q 013179 190 LLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIYYND 268 (448)
Q Consensus 190 lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~ 268 (448)
.++.|+.++ .+..||+.+.+-...- . ....+ -.+++. -++.+++.|+.+ ..
T Consensus 178 ~lasg~~dg------------~i~iwd~~~~~~~~~~-~-~h~~~--v~~l~~spd~~~l~s~s~d------------g~ 229 (321)
T 3ow8_A 178 YLASGAIDG------------IINIFDIATGKLLHTL-E-GHAMP--IRSLTFSPDSQLLVTASDD------------GY 229 (321)
T ss_dssp EEEEEETTS------------CEEEEETTTTEEEEEE-C-CCSSC--CCEEEECTTSCEEEEECTT------------SC
T ss_pred EEEEEcCCC------------eEEEEECCCCcEEEEE-c-ccCCc--eeEEEEcCCCCEEEEEcCC------------Ce
Confidence 777776543 2334576665432211 1 11111 113333 355677777654 24
Q ss_pred EEEEEcCCCceEEeccCCCCCCCccceEEEEE-CCEEEEEccCCCC
Q 013179 269 TIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (448)
Q Consensus 269 v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~ 313 (448)
+.+||+.+......-... ...-.++... ++++++.|+.++.
T Consensus 230 i~iwd~~~~~~~~~~~~h----~~~v~~~~~sp~~~~l~s~s~D~~ 271 (321)
T 3ow8_A 230 IKIYDVQHANLAGTLSGH----ASWVLNVAFCPDDTHFVSSSSDKS 271 (321)
T ss_dssp EEEEETTTCCEEEEECCC----SSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEECCCcceeEEEcCC----CCceEEEEECCCCCEEEEEeCCCc
Confidence 888898776543321110 1111222222 4667778876653
No 51
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.25 E-value=0.55 Score=43.46 Aligned_cols=111 Identities=10% Similarity=-0.099 Sum_probs=59.3
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..++.|+.++ .+.+||+.+++-...-. .........+..-+++.++.|+.++ .+..+|
T Consensus 42 ~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd 102 (369)
T 3zwl_B 42 KEGDLLFSCSKDS-----SASVWYSLNGERLGTLD---------GHTGTIWSIDVDCFTKYCVTGSADY-----SIKLWD 102 (369)
T ss_dssp TTSCEEEEEESSS-----CEEEEETTTCCEEEEEC---------CCSSCEEEEEECTTSSEEEEEETTT-----EEEEEE
T ss_pred CCCCEEEEEeCCC-----EEEEEeCCCchhhhhhh---------hcCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEE
Confidence 4566777777543 58899988876433210 1111222222222466677776543 588999
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
+.+.+-..... ......+++...++..++.++.+.......+..||+.+.
T Consensus 103 ~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 103 VSNGQCVATWK-----SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp TTTCCEEEEEE-----CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred CCCCcEEEEee-----cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 98887555432 112223333445556666666542222345777776543
No 52
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.19 E-value=0.8 Score=42.53 Aligned_cols=219 Identities=12% Similarity=0.115 Sum_probs=109.6
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++.+|+.|-. ..++.-+-.-.+|+.+.... ..|. .....++.-++.+|+.|.. ..+++-.
T Consensus 88 ~~~~~~~~g~~------g~i~~S~DgG~tW~~~~~~~------~~~~-~~~~i~~~~~~~~~~~~~~------g~v~~S~ 148 (327)
T 2xbg_A 88 QGNEGWIVGEP------PIMLHTTDGGQSWSQIPLDP------KLPG-SPRLIKALGNGSAEMITNV------GAIYRTK 148 (327)
T ss_dssp ETTEEEEEEET------TEEEEESSTTSSCEECCCCT------TCSS-CEEEEEEEETTEEEEEETT------CCEEEES
T ss_pred cCCeEEEEECC------CeEEEECCCCCCceECcccc------CCCC-CeEEEEEECCCCEEEEeCC------ccEEEEc
Confidence 34678887531 12443222245899875321 0111 1222223346788887641 1355544
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCC-CCceEeecCCCCCCCccCCceeEEe-
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI-SLEWMQLPVTGSVPPPRCGHTATMV- 186 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~-t~~W~~~~~~~~~p~~r~~~~~~~~- 186 (448)
-.-.+|+++.. +.....+.++...++.+|++|- . ..+++-+-. -.+|+.+. . +.+...+.++..
T Consensus 149 DgG~tW~~~~~----~~~~~~~~~~~~~~~~~~~~g~-~-----G~~~~S~d~gG~tW~~~~---~-~~~~~~~~~~~~~ 214 (327)
T 2xbg_A 149 DSGKNWQALVQ----EAIGVMRNLNRSPSGEYVAVSS-R-----GSFYSTWEPGQTAWEPHN---R-TTSRRLHNMGFTP 214 (327)
T ss_dssp STTSSEEEEEC----SCCCCEEEEEECTTSCEEEEET-T-----SSEEEEECTTCSSCEEEE---C-CSSSCEEEEEECT
T ss_pred CCCCCCEEeec----CCCcceEEEEEcCCCcEEEEEC-C-----CcEEEEeCCCCCceeECC---C-CCCCccceeEECC
Confidence 44668999873 2222334555555667777663 1 124554322 57899885 2 233333444433
Q ss_pred CCEEEEEcccCCCCCccCceeeecccccccC-CCCceEEecCCCCCCCCCceeEEEEe-CCEEEEEcCCCCCCCcccccc
Q 013179 187 EKRLLIYGGRGGGGPIMGDLWALKGLIEEEN-ETPGWTQLKLPGQAPSSRCGHTITSG-GHYLLLFGGHGTGGWLSRYDI 264 (448)
Q Consensus 187 ~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~-~~~~W~~~~~~g~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~ 264 (448)
++.+|+.+... . ++. .+. ...+|+.+..+ .++.....++++.. ++.+|+.|+..
T Consensus 215 ~g~~~~~~~~G---~----~~~------s~~D~G~tW~~~~~~-~~~~~~~~~~v~~~~~~~~~~~g~~g---------- 270 (327)
T 2xbg_A 215 DGRLWMIVNGG---K----IAF------SDPDNSENWGELLSP-LRRNSVGFLDLAYRTPNEVWLAGGAG---------- 270 (327)
T ss_dssp TSCEEEEETTT---E----EEE------EETTEEEEECCCBCT-TSSCCSCEEEEEESSSSCEEEEESTT----------
T ss_pred CCCEEEEeCCc---e----EEE------ecCCCCCeeEeccCC-cccCCcceEEEEecCCCEEEEEeCCC----------
Confidence 56788776421 0 111 111 25678876531 12222223444443 56888887632
Q ss_pred eeCcEEEEEcCCCceEEeccCCCCCCCccceEEEE-ECCEEEEEcc
Q 013179 265 YYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTC-LGSLYLLFGG 309 (448)
Q Consensus 265 ~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG 309 (448)
.+++-.-...+|+.+...... +...+.++. -++++++.|.
T Consensus 271 ---~i~~S~DgG~tW~~~~~~~~~--~~~~~~v~~~~~~~~~~~G~ 311 (327)
T 2xbg_A 271 ---ALLCSQDGGQTWQQDVDVKKV--PSNFYKILFFSPDQGFILGQ 311 (327)
T ss_dssp ---CEEEESSTTSSCEECGGGTTS--SSCCCEEEEEETTEEEEECS
T ss_pred ---eEEEeCCCCcccEEcCccCCC--CCCeEEEEEECCCceEEEcC
Confidence 254443346799998753211 122234433 3567666654
No 53
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.17 E-value=0.21 Score=47.29 Aligned_cols=192 Identities=11% Similarity=0.053 Sum_probs=98.7
Q ss_pred EEECCc-EEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE--CCeEEEEcccCCCCCCC
Q 013179 26 VNIGKS-KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLG 102 (448)
Q Consensus 26 ~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv~GG~~~~~~~~ 102 (448)
....++ .+|+.|+.+ ..+.++|+.+++....-.. +. .-.+++.. +..||+.+... .
T Consensus 38 ~~s~dg~~l~~~~~~d-----~~i~v~d~~~~~~~~~~~~---------~~--~v~~~~~spdg~~l~~~~~~~-----~ 96 (391)
T 1l0q_A 38 VISPDGTKVYVANAHS-----NDVSIIDTATNNVIATVPA---------GS--SPQGVAVSPDGKQVYVTNMAS-----S 96 (391)
T ss_dssp EECTTSSEEEEEEGGG-----TEEEEEETTTTEEEEEEEC---------SS--SEEEEEECTTSSEEEEEETTT-----T
T ss_pred EECCCCCEEEEECCCC-----CeEEEEECCCCeEEEEEEC---------CC--CccceEECCCCCEEEEEECCC-----C
Confidence 333344 466766543 4689999998875443211 11 12223222 34566665432 3
Q ss_pred cEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCc-EEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCc
Q 013179 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH 181 (448)
Q Consensus 103 ~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~ 181 (448)
.+.++|+.+++-..... .......++...++ .+|+.++.+ ..++.||+.+.+....-..+ ..-.
T Consensus 97 ~v~v~d~~~~~~~~~~~-----~~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~-----~~~~ 161 (391)
T 1l0q_A 97 TLSVIDTTSNTVAGTVK-----TGKSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTKAVINTVSVG-----RSPK 161 (391)
T ss_dssp EEEEEETTTTEEEEEEE-----CSSSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECC-----SSEE
T ss_pred EEEEEECCCCeEEEEEe-----CCCCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEecC-----CCcc
Confidence 59999999987655442 11222333443343 577776543 35899999888765543111 1112
Q ss_pred eeEEe--CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEe--CCEEEEEcCCCCCC
Q 013179 182 TATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG--GHYLLLFGGHGTGG 257 (448)
Q Consensus 182 ~~~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~--~~~i~v~GG~~~~~ 257 (448)
.++.. ++.+|+.++.+ ..+..||+.+.+...... ....-.+++.. +..|++.+....
T Consensus 162 ~~~~~~dg~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~g~~l~~~~~~~~-- 222 (391)
T 1l0q_A 162 GIAVTPDGTKVYVANFDS------------MSISVIDTVTNSVIDTVK-----VEAAPSGIAVNPEGTKAYVTNVDKY-- 222 (391)
T ss_dssp EEEECTTSSEEEEEETTT------------TEEEEEETTTTEEEEEEE-----CSSEEEEEEECTTSSEEEEEEECSS--
T ss_pred eEEECCCCCEEEEEeCCC------------CEEEEEECCCCeEEEEEe-----cCCCccceEECCCCCEEEEEecCcC--
Confidence 33333 34676766542 224456777765543321 11122233332 335555542111
Q ss_pred CcccccceeCcEEEEEcCCCceE
Q 013179 258 WLSRYDIYYNDTIILDRLSAQWK 280 (448)
Q Consensus 258 ~~~~~~~~~~~v~~yd~~~~~W~ 280 (448)
...+.+||+.+.+-.
T Consensus 223 --------~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 223 --------FNTVSMIDTGTNKIT 237 (391)
T ss_dssp --------CCEEEEEETTTTEEE
T ss_pred --------CCcEEEEECCCCeEE
Confidence 156899999876543
No 54
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.16 E-value=1 Score=43.42 Aligned_cols=216 Identities=13% Similarity=0.095 Sum_probs=108.7
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEEC
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDT 109 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~ 109 (448)
++..++.|+.++ .+.+||..+.+-...-. .. ...-.++..++.+++.|+.++ .+.++|.
T Consensus 142 d~~~l~~g~~dg-----~i~iwd~~~~~~~~~~~---------~h--~~~v~~l~~~~~~l~sg~~dg-----~i~vwd~ 200 (435)
T 1p22_A 142 DDQKIVSGLRDN-----TIKIWDKNTLECKRILT---------GH--TGSVLCLQYDERVIITGSSDS-----TVRVWDV 200 (435)
T ss_dssp CSSEEEEEESSS-----CEEEEESSSCCEEEEEC---------CC--SSCEEEEECCSSEEEEEETTS-----CEEEEES
T ss_pred CCCEEEEEeCCC-----eEEEEeCCCCeEEEEEc---------CC--CCcEEEEEECCCEEEEEcCCC-----eEEEEEC
Confidence 466788887643 48889998876433211 11 112233444778888887654 4889999
Q ss_pred CCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEeCCE
Q 013179 110 DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKR 189 (448)
Q Consensus 110 ~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~ 189 (448)
.+++-...-. .....-.+....+ ..++.|+.++ .+..||+.+..-..... ........-.++..++.
T Consensus 201 ~~~~~~~~~~-----~h~~~v~~l~~~~-~~l~s~s~dg-----~i~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~ 267 (435)
T 1p22_A 201 NTGEMLNTLI-----HHCEAVLHLRFNN-GMMVTCSKDR-----SIAVWDMASPTDITLRR--VLVGHRAAVNVVDFDDK 267 (435)
T ss_dssp SSCCEEEEEC-----CCCSCEEEEECCT-TEEEEEETTS-----CEEEEECSSSSCCEEEE--EECCCSSCEEEEEEETT
T ss_pred CCCcEEEEEc-----CCCCcEEEEEEcC-CEEEEeeCCC-----cEEEEeCCCCCCceeee--EecCCCCcEEEEEeCCC
Confidence 8886543321 1111122233334 4666676543 47888887654321100 00111111122333555
Q ss_pred EEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCcccccceeCcE
Q 013179 190 LLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDT 269 (448)
Q Consensus 190 lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v 269 (448)
.++.|+.++ .+..||+.+.+-...-. ... . ...++..++.+++.|+.+ ..+
T Consensus 268 ~l~s~~~dg------------~i~vwd~~~~~~~~~~~--~~~--~-~v~~~~~~~~~l~~g~~d------------g~i 318 (435)
T 1p22_A 268 YIVSASGDR------------TIKVWNTSTCEFVRTLN--GHK--R-GIACLQYRDRLVVSGSSD------------NTI 318 (435)
T ss_dssp EEEEEETTS------------EEEEEETTTCCEEEEEE--CCS--S-CEEEEEEETTEEEEEETT------------SCE
T ss_pred EEEEEeCCC------------eEEEEECCcCcEEEEEc--CCC--C-cEEEEEeCCCEEEEEeCC------------CeE
Confidence 666666532 23445666554322210 111 1 112223345566666643 358
Q ss_pred EEEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEccCCCC
Q 013179 270 IILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK 313 (448)
Q Consensus 270 ~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~ 313 (448)
.+||+.+.+-...-.. ....-.++..++..++.|+.++.
T Consensus 319 ~iwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~l~sg~~dg~ 357 (435)
T 1p22_A 319 RLWDIECGACLRVLEG-----HEELVRCIRFDNKRIVSGAYDGK 357 (435)
T ss_dssp EEEETTTCCEEEEECC-----CSSCEEEEECCSSEEEEEETTSC
T ss_pred EEEECCCCCEEEEEeC-----CcCcEEEEEecCCEEEEEeCCCc
Confidence 8999887653322111 11112233447778888887653
No 55
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.15 E-value=0.27 Score=43.83 Aligned_cols=190 Identities=8% Similarity=-0.074 Sum_probs=97.9
Q ss_pred ccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCC-CcEEEeecCCC
Q 013179 44 FLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDI-WQWSELTSFGD 122 (448)
Q Consensus 44 ~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t-~~W~~~~~~~~ 122 (448)
.-..++.+|+.+++...+... .......+..-+++.+++++ . ..++++|+.+ .+...+..
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~----------~~~v~~~~~spdg~~l~~~~-~-----~~i~~~d~~~~~~~~~~~~--- 80 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQT----------PELFEAPNWSPDGKYLLLNS-E-----GLLYRLSLAGDPSPEKVDT--- 80 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEE----------SSCCEEEEECTTSSEEEEEE-T-----TEEEEEESSSCCSCEECCC---
T ss_pred cceeEEEEeCCCCceeeeccC----------CcceEeeEECCCCCEEEEEc-C-----CeEEEEeCCCCCCceEecc---
Confidence 345799999999987665422 11122222333566666654 1 3699999999 87766652
Q ss_pred CCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe-CC-EEEEEcccCCCC
Q 013179 123 LPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EK-RLLIYGGRGGGG 200 (448)
Q Consensus 123 ~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~ 200 (448)
.+.......++...+++.+++++.... ....++.++..+..-..+. .... ...+... ++ .|++.++..+.
T Consensus 81 ~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~---~~~~---~~~~~~spdg~~l~~~~~~~~~- 152 (297)
T 2ojh_A 81 GFATICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGGTPRLMT---KNLP---SYWHGWSPDGKSFTYCGIRDQV- 152 (297)
T ss_dssp TTCCCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCCCCEECC---SSSS---EEEEEECTTSSEEEEEEEETTE-
T ss_pred ccccccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCCceEEee---cCCC---ccceEECCCCCEEEEEECCCCc-
Confidence 221122223333345566666653322 2456899998877766554 1111 1222232 33 45545543321
Q ss_pred CccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCC-EEEEEcCCCCCCCcccccceeCcEEEEEcCCCc
Q 013179 201 PIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGH-YLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ 278 (448)
Q Consensus 201 ~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~-~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 278 (448)
..++.+|..+.....+.. .+ ... ..+.. -++ .|++.+.... ...+|.+++....
T Consensus 153 ---------~~l~~~~~~~~~~~~~~~---~~-~~~-~~~~~s~dg~~l~~~~~~~~----------~~~i~~~~~~~~~ 208 (297)
T 2ojh_A 153 ---------FDIYSMDIDSGVETRLTH---GE-GRN-DGPDYSPDGRWIYFNSSRTG----------QMQIWRVRVDGSS 208 (297)
T ss_dssp ---------EEEEEEETTTCCEEECCC---SS-SCE-EEEEECTTSSEEEEEECTTS----------SCEEEEEETTSSC
T ss_pred ---------eEEEEEECCCCcceEccc---CC-Ccc-ccceECCCCCEEEEEecCCC----------CccEEEECCCCCC
Confidence 123334666666655541 11 111 22333 344 4444443222 2568899887777
Q ss_pred eEEecc
Q 013179 279 WKRLPI 284 (448)
Q Consensus 279 W~~~~~ 284 (448)
...+..
T Consensus 209 ~~~~~~ 214 (297)
T 2ojh_A 209 VERITD 214 (297)
T ss_dssp EEECCC
T ss_pred cEEEec
Confidence 666643
No 56
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.10 E-value=0.73 Score=43.56 Aligned_cols=221 Identities=8% Similarity=-0.090 Sum_probs=101.7
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++.+++.|+.++ .+.+||.....-..+. .........+..-+++.++.|+.++ .+..+|
T Consensus 118 ~~~~~l~~~~~dg-----~i~i~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd 177 (425)
T 1r5m_A 118 HDGNSIVTGVENG-----ELRLWNKTGALLNVLN----------FHRAPIVSVKWNKDGTHIISMDVEN-----VTILWN 177 (425)
T ss_dssp TTSSEEEEEETTS-----CEEEEETTSCEEEEEC----------CCCSCEEEEEECTTSSEEEEEETTC-----CEEEEE
T ss_pred CCCCEEEEEeCCC-----eEEEEeCCCCeeeecc----------CCCccEEEEEECCCCCEEEEEecCC-----eEEEEE
Confidence 4567788887643 4788885444433332 1111122222222556666666543 488899
Q ss_pred CCCCcEEEeecCCCCCC-----------cCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCc
Q 013179 109 TDIWQWSELTSFGDLPS-----------PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPP 177 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~-----------~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~ 177 (448)
+.+.+-.........+. .....+++...++. ++.|+.+ ..+..||+.+.+-...- ....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----g~i~~~d~~~~~~~~~~---~~~~- 247 (425)
T 1r5m_A 178 VISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPK-----GAIFVYQITEKTPTGKL---IGHH- 247 (425)
T ss_dssp TTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEEECGG-----GCEEEEETTCSSCSEEE---CCCS-
T ss_pred CCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCC-----CeEEEEEcCCCceeeee---ccCC-
Confidence 98876544332111110 00022333333434 5566543 35889998875432221 1011
Q ss_pred cCCceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEe-CCEEEEEcCCCC
Q 013179 178 RCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG-GHYLLLFGGHGT 255 (448)
Q Consensus 178 r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~-~~~i~v~GG~~~ 255 (448)
..-.++... ++.+++.|+.++ .+..||..+.+-...- ... ...-.+++.. ++ +++.|+.+
T Consensus 248 ~~i~~~~~~~~~~~l~~~~~d~------------~i~i~d~~~~~~~~~~---~~~-~~~i~~~~~~~~~-~l~~~~~d- 309 (425)
T 1r5m_A 248 GPISVLEFNDTNKLLLSASDDG------------TLRIWHGGNGNSQNCF---YGH-SQSIVSASWVGDD-KVISCSMD- 309 (425)
T ss_dssp SCEEEEEEETTTTEEEEEETTS------------CEEEECSSSBSCSEEE---CCC-SSCEEEEEEETTT-EEEEEETT-
T ss_pred CceEEEEECCCCCEEEEEcCCC------------EEEEEECCCCccceEe---cCC-CccEEEEEECCCC-EEEEEeCC-
Confidence 111223333 455666666432 2334465544332221 011 1112233443 44 56666543
Q ss_pred CCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEE-ECCEEEEEccCCC
Q 013179 256 GGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTC-LGSLYLLFGGFDG 312 (448)
Q Consensus 256 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~ 312 (448)
..+.+||+.+.+-...-... .....++.. -++++++.|+.++
T Consensus 310 -----------~~i~i~d~~~~~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~~dg 352 (425)
T 1r5m_A 310 -----------GSVRLWSLKQNTLLALSIVD----GVPIFAGRISQDGQKYAVAFMDG 352 (425)
T ss_dssp -----------SEEEEEETTTTEEEEEEECT----TCCEEEEEECTTSSEEEEEETTS
T ss_pred -----------CcEEEEECCCCcEeEecccC----CccEEEEEEcCCCCEEEEEECCC
Confidence 35889998776533322211 111222222 2466777777654
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.09 E-value=0.44 Score=43.54 Aligned_cols=223 Identities=14% Similarity=0.042 Sum_probs=106.5
Q ss_pred ECCcEEEEEcCCCCCcccCceEEEEcCCCcEEe-eeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEE
Q 013179 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQ-PECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWV 106 (448)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~ 106 (448)
..++.+++.|+ + ..+.+||..+..... +..... ..........+..-+++.++.|+.++ .+..
T Consensus 60 ~~~~~~l~~~~-d-----g~i~iw~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~ 123 (337)
T 1gxr_A 60 SNPTRHVYTGG-K-----GCVKVWDISHPGNKSPVSQLDC-----LNRDNYIRSCKLLPDGCTLIVGGEAS-----TLSI 123 (337)
T ss_dssp CSSSSEEEEEC-B-----SEEEEEETTSTTCCSCSEEEEC-----SCTTSBEEEEEECTTSSEEEEEESSS-----EEEE
T ss_pred ecCCcEEEEcC-C-----CeEEEEECCCCCceeeeecccc-----cCCCCcEEEEEEcCCCCEEEEEcCCC-----cEEE
Confidence 34566777776 3 358889988764211 110000 00111111122222556667776543 5889
Q ss_pred EECCCCcEEEeecCCCCCCcCc-ccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEE
Q 013179 107 LDTDIWQWSELTSFGDLPSPRD-FAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATM 185 (448)
Q Consensus 107 ~d~~t~~W~~~~~~~~~p~~r~-~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~ 185 (448)
||+.+.+...... ...... -.+++...++..++.|+.++ .+..||+.+.+....- ..... .-.++..
T Consensus 124 ~d~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d~~~~~~~~~~---~~~~~-~i~~~~~ 191 (337)
T 1gxr_A 124 WDLAAPTPRIKAE---LTSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDLHNQTLVRQF---QGHTD-GASCIDI 191 (337)
T ss_dssp EECCCC--EEEEE---EECSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEE---CCCSS-CEEEEEE
T ss_pred EECCCCCcceeee---cccCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCceeeee---ecccC-ceEEEEE
Confidence 9999887544432 111111 12333334556777776543 4889998887654432 11111 1122222
Q ss_pred e-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCccccc
Q 013179 186 V-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYD 263 (448)
Q Consensus 186 ~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~ 263 (448)
. ++..++.|+.++ .+..||+.+.+-.... ..+. .-.+++. .++.++++|+.+
T Consensus 192 ~~~~~~l~~~~~dg------------~i~~~d~~~~~~~~~~---~~~~--~v~~~~~s~~~~~l~~~~~~--------- 245 (337)
T 1gxr_A 192 SNDGTKLWTGGLDN------------TVRSWDLREGRQLQQH---DFTS--QIFSLGYCPTGEWLAVGMES--------- 245 (337)
T ss_dssp CTTSSEEEEEETTS------------EEEEEETTTTEEEEEE---ECSS--CEEEEEECTTSSEEEEEETT---------
T ss_pred CCCCCEEEEEecCC------------cEEEEECCCCceEeee---cCCC--ceEEEEECCCCCEEEEEcCC---------
Confidence 2 455666666432 2345576655433222 1111 1223333 345666666543
Q ss_pred ceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEE-CCEEEEEccCCC
Q 013179 264 IYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDG 312 (448)
Q Consensus 264 ~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~ 312 (448)
..+.+||+.+..-..+... .....++... ++++++.|+.++
T Consensus 246 ---~~i~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~dg 287 (337)
T 1gxr_A 246 ---SNVEVLHVNKPDKYQLHLH-----ESCVLSLKFAYCGKWFVSTGKDN 287 (337)
T ss_dssp ---SCEEEEETTSSCEEEECCC-----SSCEEEEEECTTSSEEEEEETTS
T ss_pred ---CcEEEEECCCCCeEEEcCC-----ccceeEEEECCCCCEEEEecCCC
Confidence 3588899887664433221 1112222222 466777777654
No 58
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.03 E-value=0.095 Score=55.12 Aligned_cols=110 Identities=9% Similarity=0.090 Sum_probs=63.6
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEEC--CeEEEEcccCCCCCCCcEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAID--CHMFIFGGRFGSRRLGDFWV 106 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~--~~lyv~GG~~~~~~~~~~~~ 106 (448)
.++..++.||.++ .+.+||+..+++..+.... .+...........+ +.+++.|+.++ .+..
T Consensus 19 ~dg~~latg~~dg-----~I~vwd~~~~~~~~~~~l~-------~h~~~V~~l~~s~~~~~~~l~s~s~Dg-----~I~v 81 (753)
T 3jro_A 19 YYGKRLATCSSDK-----TIKIFEVEGETHKLIDTLT-------GHEGPVWRVDWAHPKFGTILASCSYDG-----KVLI 81 (753)
T ss_dssp SSSCCEEEEETTT-----EEEEEEEETTEEEEEEEEC-------CCSSCEEEEEECCTTSCSEEEEEETTS-----CEEE
T ss_pred CCCCeEEEEECCC-----cEEEEecCCCCCccceecc-------CCcCceEEEEecCCCCCCEEEEEeCCC-----eEEE
Confidence 3466777777643 4888998877777665432 11111112222223 66777777654 4888
Q ss_pred EECCCCcEEEeecCCCCCCcCcc-cEEEEECC--cEEEEEecCCCCccCCceEEEeCCCC
Q 013179 107 LDTDIWQWSELTSFGDLPSPRDF-AAASAIGN--RKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 107 ~d~~t~~W~~~~~~~~~p~~r~~-~~~~~~~~--~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
+|+.+++|..+.. ....... .+++...+ +.+++.|+.++ .+..||+.+.
T Consensus 82 wd~~~~~~~~~~~---~~~h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~ 133 (753)
T 3jro_A 82 WKEENGRWSQIAV---HAVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 133 (753)
T ss_dssp EEEETTEEEEEEE---ECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSS
T ss_pred EECCCCccccccc---ccCCCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecC
Confidence 9999998877664 2222222 22333333 56777787554 3778887665
No 59
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.00 E-value=0.7 Score=43.69 Aligned_cols=65 Identities=12% Similarity=0.060 Sum_probs=35.4
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
.+..++.|+.+ ..+..||+.+.+-..... . ....-.+++...++..++.|+.++ .+..||+.+.+
T Consensus 216 ~~~~~~~~~~~-----g~i~~~d~~~~~~~~~~~---~-~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~ 280 (425)
T 1r5m_A 216 DDDKFVIPGPK-----GAIFVYQITEKTPTGKLI---G-HHGPISVLEFNDTNKLLLSASDDG-----TLRIWHGGNGN 280 (425)
T ss_dssp ETTEEEEECGG-----GCEEEEETTCSSCSEEEC---C-CSSCEEEEEEETTTTEEEEEETTS-----CEEEECSSSBS
T ss_pred CCCEEEEEcCC-----CeEEEEEcCCCceeeeec---c-CCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCc
Confidence 34446666654 358999998764322211 1 111223334445556777776543 47888887654
No 60
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.00 E-value=0.072 Score=50.25 Aligned_cols=111 Identities=12% Similarity=0.038 Sum_probs=54.0
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++.+++.|+.+ ..+.+||+.++.|..+.... .........+..-++++++.|+.++ .+..+|
T Consensus 21 ~~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~-------~h~~~v~~~~~s~~~~~l~s~s~d~-----~v~vwd 83 (377)
T 3dwl_C 21 SQRTEFVTTTAT-----NQVELYEQDGNGWKHARTFS-------DHDKIVTCVDWAPKSNRIVTCSQDR-----NAYVYE 83 (377)
T ss_dssp SSSSEEECCCSS-----SCBCEEEEETTEEEECCCBC-------CCSSCEEEEEECTTTCCEEEEETTS-----SEEEC-
T ss_pred CCCCEEEEecCC-----CEEEEEEccCCceEEEEEEe-------cCCceEEEEEEeCCCCEEEEEeCCC-----eEEEEE
Confidence 446677777754 34778899988887765331 1111222222222556777777543 488888
Q ss_pred CCCCc-EEEeecCCCCCCc-CcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 109 TDIWQ-WSELTSFGDLPSP-RDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 109 ~~t~~-W~~~~~~~~~p~~-r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
+.+.. |..... +... ..-.+++...++.+++.|+.++ .+..||+.+.+
T Consensus 84 ~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~ 133 (377)
T 3dwl_C 84 KRPDGTWKQTLV---LLRLNRAATFVRWSPNEDKFAVGSGAR-----VISVCYFEQEN 133 (377)
T ss_dssp -----CCCCEEE---CCCCSSCEEEEECCTTSSCCEEEESSS-----CEEECCC----
T ss_pred cCCCCceeeeeE---ecccCCceEEEEECCCCCEEEEEecCC-----eEEEEEECCcc
Confidence 88776 544332 1111 1112222234556777776543 37778877664
No 61
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.97 E-value=0.43 Score=43.40 Aligned_cols=132 Identities=11% Similarity=0.009 Sum_probs=69.4
Q ss_pred cEEEEECCcEEEEEcCCC--CCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-C-CeEEEEcccCCC
Q 013179 23 HSAVNIGKSKVVVFGGLV--DKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-D-CHMFIFGGRFGS 98 (448)
Q Consensus 23 ~~~~~~~~~~iyv~GG~~--~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~-~~lyv~GG~~~~ 98 (448)
...+...++.+|+..... .......+++||+.++++..+..... .. ....-++++.. + ++||+....
T Consensus 21 ~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~-----~~-~~~~~~~i~~~~~~g~l~v~~~~--- 91 (314)
T 1pjx_A 21 EGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEV-----NG-YGGIPAGCQCDRDANQLFVADMR--- 91 (314)
T ss_dssp EEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEE-----TT-EECCEEEEEECSSSSEEEEEETT---
T ss_pred cCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEeccc-----CC-CCCCCceEEEecCCCcEEEEECC---
Confidence 344444567888871100 01122459999999998876542000 00 01112333333 4 688887541
Q ss_pred CCCCcEEEEECCCCcEEEe-ecCCCCCCcCcccEEEEECCcEEEEEecCCC----------CccCCceEEEeCCCCceEe
Q 013179 99 RRLGDFWVLDTDIWQWSEL-TSFGDLPSPRDFAAASAIGNRKIVMYGGWDG----------KKWLSDVYVLDTISLEWMQ 167 (448)
Q Consensus 99 ~~~~~~~~~d~~t~~W~~~-~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~----------~~~~~~v~~yd~~t~~W~~ 167 (448)
+.+++||+. ++...+ ...........-+.++...++.+|+...... ......+++||+. .+...
T Consensus 92 ---~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~ 166 (314)
T 1pjx_A 92 ---LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ 166 (314)
T ss_dssp ---TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE
T ss_pred ---CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE
Confidence 258999999 777665 3211111112234455556678888654221 1112468999987 66555
Q ss_pred e
Q 013179 168 L 168 (448)
Q Consensus 168 ~ 168 (448)
+
T Consensus 167 ~ 167 (314)
T 1pjx_A 167 V 167 (314)
T ss_dssp E
T ss_pred e
Confidence 4
No 62
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.91 E-value=0.39 Score=49.97 Aligned_cols=217 Identities=12% Similarity=0.047 Sum_probs=110.0
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCC----------
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS---------- 98 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~---------- 98 (448)
.+++.++|+...++.....++++|+.+++....... .......+..-+++.++++.....
T Consensus 134 PDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~----------~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~ 203 (710)
T 2xdw_A 134 EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE----------RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETS 203 (710)
T ss_dssp TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE----------EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCC
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc----------CcccceEEEEeCCCEEEEEEECCccccccccccc
Confidence 456666665443333334799999999987664321 111122223335554455444322
Q ss_pred -CCCCcEEEEECCCCcEE--EeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCC------C--ceEe
Q 013179 99 -RRLGDFWVLDTDIWQWS--ELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS------L--EWMQ 167 (448)
Q Consensus 99 -~~~~~~~~~d~~t~~W~--~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t------~--~W~~ 167 (448)
.....++++++.+.+.. .+.. ....+..........+++..++.........++++.+|+.+ . .+..
T Consensus 204 ~~~~~~v~~~~l~t~~~~~~~v~~--~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 204 TNLHQKLYYHVLGTDQSEDILCAE--FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEEC--CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cCCCCEEEEEECCCCcccceEEec--cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 22345899999887642 2221 11112333344444555544444322222256899999876 4 5777
Q ss_pred ecCCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCC---ceEEecCCCCCCCCCceeEEEEe-
Q 013179 168 LPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETP---GWTQLKLPGQAPSSRCGHTITSG- 243 (448)
Q Consensus 168 ~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~---~W~~~~~~g~~p~~r~~~~~~~~- 243 (448)
+. ...... .......+++||+.+..... ...+ ..+|+.+. .|+.+... .....-..+...
T Consensus 282 l~---~~~~~~-~~~~s~dg~~l~~~s~~~~~---~~~l------~~~d~~~~~~~~~~~l~~~---~~~~~~~~~~~~~ 345 (710)
T 2xdw_A 282 LI---DNFEGE-YDYVTNEGTVFTFKTNRHSP---NYRL------INIDFTDPEESKWKVLVPE---HEKDVLEWVACVR 345 (710)
T ss_dssp EE---CSSSSC-EEEEEEETTEEEEEECTTCT---TCEE------EEEETTSCCGGGCEEEECC---CSSCEEEEEEEET
T ss_pred ee---CCCCcE-EEEEeccCCEEEEEECCCCC---CCEE------EEEeCCCCCcccceeccCC---CCCCeEEEEEEEc
Confidence 75 211111 11222236788888754321 1223 33466654 58877521 111122234444
Q ss_pred CCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCc-eEEec
Q 013179 244 GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ-WKRLP 283 (448)
Q Consensus 244 ~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~-W~~~~ 283 (448)
++.+++....+. ...++++|+.+.+ ...+.
T Consensus 346 ~~~lv~~~~~~g----------~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 346 SNFLVLCYLHDV----------KNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp TTEEEEEEEETT----------EEEEEEEETTTCCEEEEEC
T ss_pred CCEEEEEEEECC----------EEEEEEEECCCCCEEEecC
Confidence 677777664322 2468999985544 44443
No 63
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.88 E-value=1.1 Score=41.51 Aligned_cols=111 Identities=13% Similarity=0.079 Sum_probs=55.5
Q ss_pred ECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEE
Q 013179 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~ 107 (448)
..++..++.|+.+ ..+.+||+.++++....... ............-+++.++.|+.++ .+..|
T Consensus 61 ~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~i~ 123 (372)
T 1k8k_C 61 APDSNRIVTCGTD-----RNAYVWTLKGRTWKPTLVIL-------RINRAARCVRWAPNEKKFAVGSGSR-----VISIC 123 (372)
T ss_dssp ETTTTEEEEEETT-----SCEEEEEEETTEEEEEEECC-------CCSSCEEEEEECTTSSEEEEEETTS-----SEEEE
T ss_pred eCCCCEEEEEcCC-----CeEEEEECCCCeeeeeEEee-------cCCCceeEEEECCCCCEEEEEeCCC-----EEEEE
Confidence 3456677777754 34888999888876543221 0111111112222566777776543 35666
Q ss_pred ECCCCc-EEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCC
Q 013179 108 DTDIWQ-WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI 161 (448)
Q Consensus 108 d~~t~~-W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 161 (448)
|..+.. |...... ..+....-.+++...++..++.|+.++ .+..||+.
T Consensus 124 d~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~ 172 (372)
T 1k8k_C 124 YFEQENDWWVCKHI-KKPIRSTVLSLDWHPNSVLLAAGSCDF-----KCRIFSAY 172 (372)
T ss_dssp EEETTTTEEEEEEE-CTTCCSCEEEEEECTTSSEEEEEETTS-----CEEEEECC
T ss_pred EecCCCcceeeeee-ecccCCCeeEEEEcCCCCEEEEEcCCC-----CEEEEEcc
Confidence 665443 3322210 011112223333334556777777543 47788854
No 64
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.83 E-value=0.45 Score=45.56 Aligned_cols=207 Identities=10% Similarity=-0.034 Sum_probs=97.4
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE--CCeEEEEcccCCCCCCCcEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWV 106 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv~GG~~~~~~~~~~~~ 106 (448)
.++.+++.|+.+ ..+.+||+.+++-...-.. .... -.+++.. +..+|+.++.+ ..+.+
T Consensus 179 ~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~~---------~~~~-~~~~~~~~~~~~l~~~~~~~-----~~i~~ 238 (433)
T 3bws_A 179 EHNELWVSQMQA-----NAVHVFDLKTLAYKATVDL---------TGKW-SKILLYDPIRDLVYCSNWIS-----EDISV 238 (433)
T ss_dssp GGTEEEEEEGGG-----TEEEEEETTTCCEEEEEEC---------SSSS-EEEEEEETTTTEEEEEETTT-----TEEEE
T ss_pred CCCEEEEEECCC-----CEEEEEECCCceEEEEEcC---------CCCC-eeEEEEcCCCCEEEEEecCC-----CcEEE
Confidence 346677766642 3588999988654332110 1111 1222222 34566766433 25899
Q ss_pred EECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCc---cCCceEEEeCCCCceEeecCCCCCCCccCCcee
Q 013179 107 LDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKK---WLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTA 183 (448)
Q Consensus 107 ~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~---~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~ 183 (448)
||+.+.+...... ....-..++...+++.+++++..... .-..++.||+.+.+-.... ..+. .-..+
T Consensus 239 ~d~~~~~~~~~~~-----~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~---~~~~--~~~~~ 308 (433)
T 3bws_A 239 IDRKTKLEIRKTD-----KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI---GPPG--NKRHI 308 (433)
T ss_dssp EETTTTEEEEECC-----CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE---EEEE--CEEEE
T ss_pred EECCCCcEEEEec-----CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec---cCCC--CcceE
Confidence 9999887654432 22222333343454444444432221 1236889999877654432 1111 11122
Q ss_pred EEe--CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEe-CC-EEEEEcCCCCCC--
Q 013179 184 TMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG-GH-YLLLFGGHGTGG-- 257 (448)
Q Consensus 184 ~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~-- 257 (448)
+.. ++.+|+.++.+ ..+..||+.+.+-...- +....-.+++.. ++ .+|+.+......
T Consensus 309 ~~~~~g~~l~~~~~~~------------~~v~v~d~~~~~~~~~~-----~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 371 (433)
T 3bws_A 309 VSGNTENKIYVSDMCC------------SKIEVYDLKEKKVQKSI-----PVFDKPNTIALSPDGKYLYVSCRGPNHPTE 371 (433)
T ss_dssp EECSSTTEEEEEETTT------------TEEEEEETTTTEEEEEE-----ECSSSEEEEEECTTSSEEEEEECCCCCTTT
T ss_pred EECCCCCEEEEEecCC------------CEEEEEECCCCcEEEEe-----cCCCCCCeEEEcCCCCEEEEEecCCCcccc
Confidence 222 33677776543 23445577665443222 111122244443 33 455544321100
Q ss_pred CcccccceeCcEEEEEcCCCceEEe
Q 013179 258 WLSRYDIYYNDTIILDRLSAQWKRL 282 (448)
Q Consensus 258 ~~~~~~~~~~~v~~yd~~~~~W~~~ 282 (448)
........-..++++|+.+.+....
T Consensus 372 ~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 372 GYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp CTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred ccccccccceEEEEEECCCCcEEEE
Confidence 0000000113799999988765543
No 65
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.83 E-value=1.1 Score=42.85 Aligned_cols=106 Identities=14% Similarity=0.132 Sum_probs=52.2
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..++.|+.++ .+.++|+.+++-.... .....+ ..++..++.+++.|+.++ .+..+|
T Consensus 157 pdg~~lasgs~Dg-----~v~iWd~~~~~~~~~~---------~~h~~~--v~~~s~~~~~l~sgs~d~-----~i~~~d 215 (420)
T 4gga_A 157 KEGNYLAVGTSSA-----EVQLWDVQQQKRLRNM---------TSHSAR--VGSLSWNSYILSSGSRSG-----HIHHHD 215 (420)
T ss_dssp TTSSEEEEEETTS-----CEEEEETTTTEEEEEE---------CCCSSC--EEEEEEETTEEEEEETTS-----EEEEEE
T ss_pred CCCCEEEEEECCC-----eEEEEEcCCCcEEEEE---------eCCCCc--eEEEeeCCCEEEEEeCCC-----ceeEee
Confidence 4456666666543 4778888877532221 112222 334455677777777543 467777
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
..+......... ... ..........++..++.|+.++ .+..+|..+.
T Consensus 216 ~~~~~~~~~~~~--~h~-~~~~~~~~~~~g~~l~s~~~D~-----~v~i~~~~~~ 262 (420)
T 4gga_A 216 VRVAEHHVATLS--GHS-QEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPG 262 (420)
T ss_dssp TTSSSCEEEEEE--CCS-SCEEEEEECTTSSEEEEEETTS-----CEEEEESSCC
T ss_pred ecccceeeEEec--ccc-cceeeeeecCCCCeeeeeeccc-----cceEEeeccc
Confidence 765443222210 001 1111222223445666666543 3566666544
No 66
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.82 E-value=1 Score=40.60 Aligned_cols=190 Identities=9% Similarity=-0.061 Sum_probs=106.3
Q ss_pred eeEEEEC-CeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEE
Q 013179 80 HIAVAID-CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVL 158 (448)
Q Consensus 80 h~~~~~~-~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 158 (448)
|.....+ +.||+..|..+ .+.+.++|+.+++-..-.+ ++...+....+..+ +++|+..-. -+.+++|
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~---l~~~~fgeGi~~~g-~~lyv~t~~-----~~~v~vi 91 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHK---MDDSYFGEGLTLLN-EKLYQVVWL-----KNIGFIY 91 (266)
T ss_dssp EEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEE---CCTTCCEEEEEEET-TEEEEEETT-----CSEEEEE
T ss_pred ccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEe---cCCCcceEEEEEeC-CEEEEEEec-----CCEEEEE
Confidence 5565555 79999877432 2469999999998655442 44444445556665 499998642 3458999
Q ss_pred eCCCCceEe-ecCCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceE-EecCCCCCCCCC-
Q 013179 159 DTISLEWMQ-LPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT-QLKLPGQAPSSR- 235 (448)
Q Consensus 159 d~~t~~W~~-~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~-~~~~~g~~p~~r- 235 (448)
|+.+.+=.. ++. + +| .+..++.-++++|+.-|. +.+..+|+++.+-. .++.. ..+.+.
T Consensus 92 D~~t~~v~~~i~~-g-~~---~g~glt~Dg~~l~vs~gs-------------~~l~viD~~t~~v~~~I~Vg-~~~~p~~ 152 (266)
T 2iwa_A 92 DRRTLSNIKNFTH-Q-MK---DGWGLATDGKILYGSDGT-------------SILYEIDPHTFKLIKKHNVK-YNGHRVI 152 (266)
T ss_dssp ETTTTEEEEEEEC-C-SS---SCCEEEECSSSEEEECSS-------------SEEEEECTTTCCEEEEEECE-ETTEECC
T ss_pred ECCCCcEEEEEEC-C-CC---CeEEEEECCCEEEEECCC-------------CeEEEEECCCCcEEEEEEEC-CCCcccc
Confidence 998765332 321 1 12 233444446788886541 22344488886643 33321 111111
Q ss_pred ceeEEEEeCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceE---EeccC------CCCCCCccceEEEEE--CCEE
Q 013179 236 CGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWK---RLPIG------NEPPPARAYHSMTCL--GSLY 304 (448)
Q Consensus 236 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~---~~~~~------~~~p~~r~~~~~~~~--~~~i 304 (448)
.-..+...++++|+--. ..++|.+.|+.+.+-. .+... ...+..-.-.+++.. ++++
T Consensus 153 ~~nele~~dg~lyvn~~------------~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~l 220 (266)
T 2iwa_A 153 RLNELEYINGEVWANIW------------QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRI 220 (266)
T ss_dssp CEEEEEEETTEEEEEET------------TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEE
T ss_pred cceeEEEECCEEEEecC------------CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEE
Confidence 11233445788887532 2368999999988643 33211 000111122444444 4689
Q ss_pred EEEccCCC
Q 013179 305 LLFGGFDG 312 (448)
Q Consensus 305 ~v~GG~~~ 312 (448)
||-|+...
T Consensus 221 fVTgk~~~ 228 (266)
T 2iwa_A 221 FVTGKLWP 228 (266)
T ss_dssp EEEETTCS
T ss_pred EEECCCCC
Confidence 99987653
No 67
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.69 E-value=0.63 Score=48.80 Aligned_cols=107 Identities=9% Similarity=-0.053 Sum_probs=59.9
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..+++|+.+ ..+.+||..+++....-. .+.......+..-+++.++.|+.+ ..+.+||
T Consensus 23 p~~~~la~~~~~-----g~v~iwd~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~ 83 (814)
T 3mkq_A 23 PTEPWVLTTLYS-----GRVEIWNYETQVEVRSIQ---------VTETPVRAGKFIARKNWIIVGSDD-----FRIRVFN 83 (814)
T ss_dssp SSSSEEEEEETT-----SEEEEEETTTTEEEEEEE---------CCSSCEEEEEEEGGGTEEEEEETT-----SEEEEEE
T ss_pred CCCCEEEEEeCC-----CEEEEEECCCCceEEEEe---------cCCCcEEEEEEeCCCCEEEEEeCC-----CeEEEEE
Confidence 456677777753 358899998876533221 122222233333456677777754 3589999
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
..+++....-. .. ...-.+++...++..++.|+.++ .+..||+.++
T Consensus 84 ~~~~~~~~~~~---~~-~~~v~~~~~s~~~~~l~~~~~dg-----~i~vw~~~~~ 129 (814)
T 3mkq_A 84 YNTGEKVVDFE---AH-PDYIRSIAVHPTKPYVLSGSDDL-----TVKLWNWENN 129 (814)
T ss_dssp TTTCCEEEEEE---CC-SSCEEEEEECSSSSEEEEEETTS-----EEEEEEGGGT
T ss_pred CCCCcEEEEEe---cC-CCCEEEEEEeCCCCEEEEEcCCC-----EEEEEECCCC
Confidence 98887654332 11 11122233334555666666433 4788888765
No 68
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=95.69 E-value=0.98 Score=44.11 Aligned_cols=60 Identities=12% Similarity=0.140 Sum_probs=40.9
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEEC
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDT 109 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~ 109 (448)
++++|+|-| +..|.||..+++.....-. .+ +. .-++....+++|+|-| +..|+||+
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~-------gi--~~-iDAA~~~~g~~YfFkG-------~~y~rfd~ 213 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSWP-------AV--GN-CTSALRWLGRYYCFQG-------NQFLRFNP 213 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECCT-------TS--CC-CSEEEEETTEEEEEET-------TEEEEECT
T ss_pred CCeEEEEec-------ccEEEEecccceeecccCC-------CC--Cc-cchheeeCCceEEEEC-------CEEEEEcC
Confidence 578899988 4589999998765432110 12 23 4566667899999987 34888888
Q ss_pred CCCc
Q 013179 110 DIWQ 113 (448)
Q Consensus 110 ~t~~ 113 (448)
.+.+
T Consensus 214 ~~~~ 217 (460)
T 1qhu_A 214 VSGE 217 (460)
T ss_dssp TTCC
T ss_pred ccCc
Confidence 6654
No 69
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.64 E-value=1.2 Score=42.74 Aligned_cols=108 Identities=9% Similarity=0.021 Sum_probs=58.1
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++.+++.|+.++ .+.+||..+++-...- ..+.......++.-++++++.|+.++ .+..+|
T Consensus 118 p~~~~l~s~s~Dg-----~i~vwd~~~~~~~~~l---------~~h~~~V~~v~~~~~~~~l~sgs~D~-----~i~iwd 178 (410)
T 1vyh_C 118 PVFSVMVSASEDA-----TIKVWDYETGDFERTL---------KGHTDSVQDISFDHSGKLLASCSADM-----TIKLWD 178 (410)
T ss_dssp SSSSEEEEEESSS-----CEEEEETTTCCCCEEE---------CCCSSCEEEEEECTTSSEEEEEETTS-----CCCEEE
T ss_pred CCCCEEEEEeCCC-----eEEEEECCCCcEEEEE---------eccCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEe
Confidence 4466888887653 4888998887542211 11111111222223567778887654 366778
Q ss_pred CCCCcEEEeecCCCCCCcC-cccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCce
Q 013179 109 TDIWQWSELTSFGDLPSPR-DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r-~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (448)
+.+.+-... +.... .-.+++...++..++.|+.++ .+..||+.+..-
T Consensus 179 ~~~~~~~~~-----~~~h~~~V~~v~~~p~~~~l~s~s~D~-----~i~~wd~~~~~~ 226 (410)
T 1vyh_C 179 FQGFECIRT-----MHGHDHNVSSVSIMPNGDHIVSASRDK-----TIKMWEVQTGYC 226 (410)
T ss_dssp TTSSCEEEC-----CCCCSSCEEEEEECSSSSEEEEEETTS-----EEEEEETTTCCE
T ss_pred CCCCceeEE-----EcCCCCCEEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcE
Confidence 876553221 21111 112223334556677777544 478889887654
No 70
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.59 E-value=0.59 Score=41.54 Aligned_cols=212 Identities=8% Similarity=-0.042 Sum_probs=102.1
Q ss_pred ECCcEEEEEcCCCCCcccCceEEEEcCC-CcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEE
Q 013179 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDN-KLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWV 106 (448)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~ 106 (448)
..+++.+++++. ..++++|+.+ ++...+... .........+..-+++.+++++.... ....+|.
T Consensus 50 spdg~~l~~~~~------~~i~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~ 114 (297)
T 2ojh_A 50 SPDGKYLLLNSE------GLLYRLSLAGDPSPEKVDTG--------FATICNNDHGISPDGALYAISDKVEF-GKSAIYL 114 (297)
T ss_dssp CTTSSEEEEEET------TEEEEEESSSCCSCEECCCT--------TCCCBCSCCEECTTSSEEEEEECTTT-SSCEEEE
T ss_pred CCCCCEEEEEcC------CeEEEEeCCCCCCceEeccc--------cccccccceEECCCCCEEEEEEeCCC-CcceEEE
Confidence 345666666541 3699999998 776655311 11122222333335666666553321 3456999
Q ss_pred EECCCCcEEEeecCCCCCCcCcccEEEEECCc-EEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEE
Q 013179 107 LDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATM 185 (448)
Q Consensus 107 ~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~ 185 (448)
+|..+.+-..+.. . .. ....+...++ .|++.++.++. ..+|.+|..+.....+. ..+.. -..+..
T Consensus 115 ~~~~~~~~~~~~~---~-~~--~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~~~~~~~---~~~~~--~~~~~~ 180 (297)
T 2ojh_A 115 LPSTGGTPRLMTK---N-LP--SYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSGVETRLT---HGEGR--NDGPDY 180 (297)
T ss_dssp EETTCCCCEECCS---S-SS--EEEEEECTTSSEEEEEEEETTE---EEEEEEETTTCCEEECC---CSSSC--EEEEEE
T ss_pred EECCCCceEEeec---C-CC--ccceEECCCCCEEEEEECCCCc---eEEEEEECCCCcceEcc---cCCCc--cccceE
Confidence 9998887665542 1 11 2223333344 45545543322 35788888877776654 21111 112222
Q ss_pred e-CCE-EEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCcccc
Q 013179 186 V-EKR-LLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRY 262 (448)
Q Consensus 186 ~-~~~-lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~ 262 (448)
. +++ |++.+...+. ..+ +.+++.+.....+.. .. .....+.. -+++.+++++...... ...
T Consensus 181 s~dg~~l~~~~~~~~~----~~i------~~~~~~~~~~~~~~~---~~--~~~~~~~~s~dg~~l~~~~~~~~~~-~~~ 244 (297)
T 2ojh_A 181 SPDGRWIYFNSSRTGQ----MQI------WRVRVDGSSVERITD---SA--YGDWFPHPSPSGDKVVFVSYDADVF-DHP 244 (297)
T ss_dssp CTTSSEEEEEECTTSS----CEE------EEEETTSSCEEECCC---CS--EEEEEEEECTTSSEEEEEEEETTCC-SCC
T ss_pred CCCCCEEEEEecCCCC----ccE------EEECCCCCCcEEEec---CC--cccCCeEECCCCCEEEEEEcCCCCC-ccc
Confidence 2 444 4444332221 123 333555666555541 11 11122333 3444444444322110 000
Q ss_pred cceeCcEEEEEcCCCceEEecc
Q 013179 263 DIYYNDTIILDRLSAQWKRLPI 284 (448)
Q Consensus 263 ~~~~~~v~~yd~~~~~W~~~~~ 284 (448)
......++++|+.+.+...+..
T Consensus 245 ~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp SSEEEEEEEEETTSCSCEEEEE
T ss_pred ccCceEEEEEecCCCCceeeec
Confidence 0123569999999888766543
No 71
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.54 E-value=2.7 Score=43.46 Aligned_cols=123 Identities=14% Similarity=0.062 Sum_probs=67.1
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCc--EEeeeecCCCCCCCCCC---CCCcceeEEEECCeEEEEcccCCCCCCCc
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKL--WFQPECTGNGSNGQVGP---GPRAFHIAVAIDCHMFIFGGRFGSRRLGD 103 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~p---~~R~~h~~~~~~~~lyv~GG~~~~~~~~~ 103 (448)
.+++||+... .+.++.+|..+++ |+.-..... ...+ ......+.++.+++||+... ...
T Consensus 76 ~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~----~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg~ 139 (677)
T 1kb0_A 76 VDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDR----STGFKGCCDVVNRGVALWKGKVYVGAW------DGR 139 (677)
T ss_dssp ETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCG----GGGGGSSSCSCCCCCEEETTEEEEECT------TSE
T ss_pred ECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCc----cccccccccCCCCCceEECCEEEEEcC------CCE
Confidence 3488888765 2469999999885 876432100 0000 00112344557888888632 235
Q ss_pred EEEEECCCCc--EEEeecCCCCCCc-CcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc--eEeec
Q 013179 104 FWVLDTDIWQ--WSELTSFGDLPSP-RDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLP 169 (448)
Q Consensus 104 ~~~~d~~t~~--W~~~~~~~~~p~~-r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~ 169 (448)
++.+|..|++ |+.-... +.+.. ....+.++. ++.+|+..+.........++.||..+++ |+.-.
T Consensus 140 l~alD~~tG~~~W~~~~~~-~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 140 LIALDAATGKEVWHQNTFE-GQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp EEEEETTTCCEEEEEETTT-TCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred EEEEECCCCCEEeeecCCc-CcCcCcccccCcEEE-CCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 9999998875 7664310 11111 111222334 4577775432222224569999998766 87653
No 72
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.52 E-value=1.3 Score=39.67 Aligned_cols=218 Identities=9% Similarity=-0.031 Sum_probs=110.2
Q ss_pred EEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCCC
Q 013179 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLG 102 (448)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~~ 102 (448)
.+++..++.+|+.... ...+.+||+. +++..+.... ....-++++.. ++++|+..... .
T Consensus 66 ~i~~~~~g~l~v~~~~-----~~~v~~~d~~-g~~~~~~~~~---------~~~~~~~i~~~~~g~l~v~~~~~-----~ 125 (300)
T 2qc5_A 66 CLIVSSLGDIWFTENG-----ANKIGKLSKK-GGFTEYPLPQ---------PDSGPYGITEGLNGDIWFTQLNG-----D 125 (300)
T ss_dssp EEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSS---------TTCCEEEEEECSTTCEEEEETTT-----T
T ss_pred eEEECCCCCEEEEecC-----CCeEEEECCC-CCeEEecCCC---------CCCCCccceECCCCCEEEEccCC-----C
Confidence 3334455677775432 1348889988 7666543210 11223344443 57888874322 3
Q ss_pred cEEEEECCCCcEEEeecCCCCCC-cCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCC-
Q 013179 103 DFWVLDTDIWQWSELTSFGDLPS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCG- 180 (448)
Q Consensus 103 ~~~~~d~~t~~W~~~~~~~~~p~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~- 180 (448)
.+++||+. ++..... .+. ...-+..+...++++|+.... ...+++||+ +.+...+.. +.....
T Consensus 126 ~i~~~~~~-g~~~~~~----~~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~----~~~~~~~ 190 (300)
T 2qc5_A 126 RIGKLTAD-GTIYEYD----LPNKGSYPAFITLGSDNALWFTENQ-----NNSIGRITN-TGKLEEYPL----PTNAAAP 190 (300)
T ss_dssp EEEEECTT-SCEEEEE----CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEEC----SSTTCCE
T ss_pred eEEEECCC-CCEEEcc----CCCCCCCceeEEECCCCCEEEEecC-----CCeEEEECC-CCcEEEeeC----CCCCCCc
Confidence 58899998 6666543 221 122234444456678876531 235899998 677766542 111111
Q ss_pred ceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCC
Q 013179 181 HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGW 258 (448)
Q Consensus 181 ~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~ 258 (448)
..++.. ++.+|+..... ..+..||+ +.++.....+. ....-.+++. .++.||+.....
T Consensus 191 ~~i~~d~~g~l~v~~~~~------------~~i~~~~~-~g~~~~~~~~~---~~~~~~~i~~d~~g~l~v~~~~~---- 250 (300)
T 2qc5_A 191 VGITSGNDGALWFVEIMG------------NKIGRITT-TGEISEYDIPT---PNARPHAITAGKNSEIWFTEWGA---- 250 (300)
T ss_dssp EEEEECTTSSEEEEETTT------------TEEEEECT-TCCEEEEECSS---TTCCEEEEEECSTTCEEEEETTT----
T ss_pred ceEEECCCCCEEEEccCC------------CEEEEEcC-CCcEEEEECCC---CCCCceEEEECCCCCEEEeccCC----
Confidence 222232 46777754221 22445576 55565553211 1112234444 356788865221
Q ss_pred cccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEE-CCEEEEEc
Q 013179 259 LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (448)
Q Consensus 259 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~G 308 (448)
+.+.+||+ +.+......... ...-++++.- +++||+..
T Consensus 251 --------~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~ 289 (300)
T 2qc5_A 251 --------NQIGRITN-DNTIQEYQLQTE---NAEPHGITFGKDGSVWFAL 289 (300)
T ss_dssp --------TEEEEECT-TSCEEEEECCST---TCCCCCEEECTTSCEEEEC
T ss_pred --------CeEEEECC-CCcEEEEECCcc---CCccceeEeCCCCCEEEEc
Confidence 46889998 455554432211 1112333333 46777654
No 73
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.52 E-value=1.9 Score=41.53 Aligned_cols=213 Identities=13% Similarity=0.089 Sum_probs=103.0
Q ss_pred EEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCC
Q 013179 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDI 111 (448)
Q Consensus 32 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t 111 (448)
.+++.|+.+ ..+.+||+.+++-...- . ... ..-.++..++..++.|+.++ .+..+|+.+
T Consensus 170 ~~l~s~~~d-----g~i~vwd~~~~~~~~~~-~--------~h~--~~v~~~~~~~~~l~s~s~dg-----~i~~wd~~~ 228 (445)
T 2ovr_B 170 NIIISGSTD-----RTLKVWNAETGECIHTL-Y--------GHT--STVRCMHLHEKRVVSGSRDA-----TLRVWDIET 228 (445)
T ss_dssp TEEEEEETT-----SCEEEEETTTTEEEEEE-C--------CCS--SCEEEEEEETTEEEEEETTS-----EEEEEESSS
T ss_pred CEEEEEeCC-----CeEEEEECCcCcEEEEE-C--------CCC--CcEEEEEecCCEEEEEeCCC-----EEEEEECCC
Confidence 356666654 34788888887532211 0 111 11223333455566666543 588899987
Q ss_pred CcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEeCCEEE
Q 013179 112 WQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLL 191 (448)
Q Consensus 112 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~ly 191 (448)
.+-..... .....-.++.. ++..++.|+.++ .+..||+.+.+-...- ......-.....++..+
T Consensus 229 ~~~~~~~~-----~~~~~v~~~~~-~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~l 292 (445)
T 2ovr_B 229 GQCLHVLM-----GHVAAVRCVQY-DGRRVVSGAYDF-----MVKVWDPETETCLHTL-----QGHTNRVYSLQFDGIHV 292 (445)
T ss_dssp CCEEEEEE-----CCSSCEEEEEE-CSSCEEEEETTS-----CEEEEEGGGTEEEEEE-----CCCSSCEEEEEECSSEE
T ss_pred CcEEEEEc-----CCcccEEEEEE-CCCEEEEEcCCC-----EEEEEECCCCcEeEEe-----cCCCCceEEEEECCCEE
Confidence 76443321 11111222333 446667776543 4788888766533221 11111122333366667
Q ss_pred EEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCcccccceeCcEEE
Q 013179 192 IYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTII 271 (448)
Q Consensus 192 v~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~ 271 (448)
+.|+.++ .+..||..+.+-...- . .... .-.++... +.+++.|+.+ ..+.+
T Consensus 293 ~~~~~d~------------~i~i~d~~~~~~~~~~-~--~~~~-~v~~~~~~-~~~l~~~~~d------------g~i~v 343 (445)
T 2ovr_B 293 VSGSLDT------------SIRVWDVETGNCIHTL-T--GHQS-LTSGMELK-DNILVSGNAD------------STVKI 343 (445)
T ss_dssp EEEETTS------------CEEEEETTTCCEEEEE-C--CCCS-CEEEEEEE-TTEEEEEETT------------SCEEE
T ss_pred EEEeCCC------------eEEEEECCCCCEEEEE-c--CCcc-cEEEEEEe-CCEEEEEeCC------------CeEEE
Confidence 7776543 2344566655433221 0 1111 11123333 4455666543 35888
Q ss_pred EEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEccCCC
Q 013179 272 LDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (448)
Q Consensus 272 yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 312 (448)
||+.+.+-...-.. .......-.++..++.+++.|+.++
T Consensus 344 wd~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~l~s~~~dg 382 (445)
T 2ovr_B 344 WDIKTGQCLQTLQG--PNKHQSAVTCLQFNKNFVITSSDDG 382 (445)
T ss_dssp EETTTCCEEEEECS--TTSCSSCEEEEEECSSEEEEEETTS
T ss_pred EECCCCcEEEEEcc--CCCCCCCEEEEEECCCEEEEEeCCC
Confidence 99876653322111 1111122333444677778887664
No 74
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.49 E-value=1.3 Score=39.60 Aligned_cols=220 Identities=13% Similarity=0.008 Sum_probs=112.9
Q ss_pred cEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCC
Q 013179 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRL 101 (448)
Q Consensus 23 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~ 101 (448)
+.++...++.+|+.... ...+.+||+. ++...+... .....-++++.. ++.+|+.... .
T Consensus 23 ~~i~~d~~g~l~v~~~~-----~~~v~~~~~~-~~~~~~~~~---------~~~~~~~~i~~~~~g~l~v~~~~-----~ 82 (300)
T 2qc5_A 23 YGITSSEDGKVWFTQHK-----ANKISSLDQS-GRIKEFEVP---------TPDAKVMCLIVSSLGDIWFTENG-----A 82 (300)
T ss_dssp EEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECS---------STTCCEEEEEECTTSCEEEEETT-----T
T ss_pred ceeeECCCCCEEEEcCC-----CCeEEEECCC-CceEEEECC---------CCCCcceeEEECCCCCEEEEecC-----C
Confidence 44444566788886532 2458889988 776655321 011122334433 4678886432 1
Q ss_pred CcEEEEECCCCcEEEeecCCCCCC-cCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCC
Q 013179 102 GDFWVLDTDIWQWSELTSFGDLPS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCG 180 (448)
Q Consensus 102 ~~~~~~d~~t~~W~~~~~~~~~p~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~ 180 (448)
..+.+||+. +++..+. .|. ...-+.++...++.+|+.... -..+++||+. .+...+.... ....-
T Consensus 83 ~~v~~~d~~-g~~~~~~----~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~~~~---~~~~~ 148 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYP----LPQPDSGPYGITEGLNGDIWFTQLN-----GDRIGKLTAD-GTIYEYDLPN---KGSYP 148 (300)
T ss_dssp TEEEEECTT-SCEEEEE----CSSTTCCEEEEEECSTTCEEEEETT-----TTEEEEECTT-SCEEEEECSS---TTCCE
T ss_pred CeEEEECCC-CCeEEec----CCCCCCCCccceECCCCCEEEEccC-----CCeEEEECCC-CCEEEccCCC---CCCCc
Confidence 358999998 7776554 221 122344444456788886532 2358899987 6666543111 11111
Q ss_pred ceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEe-CCEEEEEcCCCCCCC
Q 013179 181 HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG-GHYLLLFGGHGTGGW 258 (448)
Q Consensus 181 ~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~ 258 (448)
+.++.. ++++|+..... ..+..||+ +.+...+..++.. ..-..+++. ++.||+.....
T Consensus 149 ~~i~~d~~g~l~v~~~~~------------~~i~~~~~-~g~~~~~~~~~~~---~~~~~i~~d~~g~l~v~~~~~---- 208 (300)
T 2qc5_A 149 AFITLGSDNALWFTENQN------------NSIGRITN-TGKLEEYPLPTNA---AAPVGITSGNDGALWFVEIMG---- 208 (300)
T ss_dssp EEEEECTTSSEEEEETTT------------TEEEEECT-TCCEEEEECSSTT---CCEEEEEECTTSSEEEEETTT----
T ss_pred eeEEECCCCCEEEEecCC------------CeEEEECC-CCcEEEeeCCCCC---CCcceEEECCCCCEEEEccCC----
Confidence 223332 46677754221 22445577 5666655421111 122234443 56788764221
Q ss_pred cccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEE-CCEEEEEc
Q 013179 259 LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (448)
Q Consensus 259 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~G 308 (448)
+.+++||+ +.++........ ...-.+++.- +++||+..
T Consensus 209 --------~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 209 --------NKIGRITT-TGEISEYDIPTP---NARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp --------TEEEEECT-TCCEEEEECSST---TCCEEEEEECSTTCEEEEE
T ss_pred --------CEEEEEcC-CCcEEEEECCCC---CCCceEEEECCCCCEEEec
Confidence 35899998 556655432111 1112233332 46777765
No 75
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.48 E-value=0.77 Score=46.97 Aligned_cols=215 Identities=10% Similarity=-0.043 Sum_probs=112.0
Q ss_pred CCcEEEEEcCCCC-----CcccCceEEEEcCC------CcEEeee-ecCCCCCCCCCCCCCcceeEEEECCeEEEEcccC
Q 013179 29 GKSKVVVFGGLVD-----KRFLSDVVVYDIDN------KLWFQPE-CTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRF 96 (448)
Q Consensus 29 ~~~~iyv~GG~~~-----~~~~~~~~~yd~~~------~~W~~~~-~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~ 96 (448)
.+++.+++...+. .....+++.+|+.+ +.-..+. .. .......+..-+++.+++....
T Consensus 139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~----------~~~~~~~~~SpDG~~la~~~~~ 208 (662)
T 3azo_A 139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDA----------HRFVTGPRLSPDGRQAVWLAWD 208 (662)
T ss_dssp TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSC----------SSEECCCEECTTSSEEEEEEEC
T ss_pred CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecC----------CCcccCceECCCCCEEEEEECC
Confidence 4455555554321 12335799999988 6655543 11 1111222233355544444433
Q ss_pred CCC---CCCcEEEEECC-CC---cEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeec
Q 013179 97 GSR---RLGDFWVLDTD-IW---QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLP 169 (448)
Q Consensus 97 ~~~---~~~~~~~~d~~-t~---~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~ 169 (448)
... ...+++++|+. ++ +...+.. .. .......+...++++|+.+..++ ...++.+|+.+.+++.+.
T Consensus 209 ~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~---~~-~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~~~~~l~ 281 (662)
T 3azo_A 209 HPRMPWEGTELKTARVTEDGRFADTRTLLG---GP-EEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATGAATQLC 281 (662)
T ss_dssp TTCCTTTCEEEEEEEECTTSCEEEEEEEEE---ET-TBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTCCEEESS
T ss_pred CCCCCCCCcEEEEEEECCCCcccccEEeCC---CC-CceEcceEECCCCeEEEEECCCC---CeEEEEEECCCCceeecc
Confidence 211 13579999999 57 4444442 00 11222333345667777765543 246999999899998875
Q ss_pred CCC-CCCCccC---CceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEE-EEe
Q 013179 170 VTG-SVPPPRC---GHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTI-TSG 243 (448)
Q Consensus 170 ~~~-~~p~~r~---~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~-~~~ 243 (448)
... ....+.. ....+.. ++++++.+.. +. ..+| .+|+++.....+.. +.. ....+ ...
T Consensus 282 ~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~----~~l~------~~d~~~~~~~~l~~----~~~-~~~~~~s~~ 345 (662)
T 3azo_A 282 RREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GA----AVLG------ILDPESGELVDAAG----PWT-EWAATLTVS 345 (662)
T ss_dssp CCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SS----CEEE------EEETTTTEEEECCS----SCC-EEEEEEEEE
T ss_pred cccccccCccccccCceEeEeCCCEEEEEEEc-Cc----cEEE------EEECCCCcEEEecC----CCC-eEEEEEecC
Confidence 210 0001111 1223333 5677666654 21 2233 34777777666642 111 12233 445
Q ss_pred CCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEeccC
Q 013179 244 GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIG 285 (448)
Q Consensus 244 ~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~ 285 (448)
++.+++..+... ....+|.+|+.+.+.+.+...
T Consensus 346 ~~~~~~~~~~~~---------~~~~i~~~d~~~g~~~~l~~~ 378 (662)
T 3azo_A 346 GTRAVGVAASPR---------TAYEVVELDTVTGRARTIGAR 378 (662)
T ss_dssp TTEEEEEEEETT---------EEEEEEEEETTTCCEEEEESC
T ss_pred CCEEEEEEcCCC---------CCCEEEEEECCCCceEEeecC
Confidence 666666654322 335799999999988887543
No 76
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.43 E-value=0.87 Score=42.39 Aligned_cols=112 Identities=8% Similarity=0.061 Sum_probs=61.8
Q ss_pred ECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEE
Q 013179 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~ 107 (448)
-.++.+++.||.++ .+.++|..++.|........ .........+..-++++++.|+.++ .+..+
T Consensus 25 sp~g~~las~~~D~-----~i~iw~~~~~~~~~~~~~~~------~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw 88 (345)
T 3fm0_A 25 NPAGTLLASCGGDR-----RIRIWGTEGDSWICKSVLSE------GHQRTVRKVAWSPCGNYLASASFDA-----TTCIW 88 (345)
T ss_dssp CTTSSCEEEEETTS-----CEEEEEEETTEEEEEEEECS------SCSSCEEEEEECTTSSEEEEEETTS-----CEEEE
T ss_pred CCCCCEEEEEcCCC-----eEEEEEcCCCcceeeeeecc------ccCCcEEEEEECCCCCEEEEEECCC-----cEEEE
Confidence 35577888888653 47888998888764432210 1111112222223567777777654 36777
Q ss_pred ECCCCcEEEeecCCCCCCcC-cccEEEEECCcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 108 DTDIWQWSELTSFGDLPSPR-DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r-~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
|..+..+..+.. +.... .-.+++...++.+++.|+.++ .+..+|+.+.
T Consensus 89 ~~~~~~~~~~~~---~~~h~~~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~~~~ 137 (345)
T 3fm0_A 89 KKNQDDFECVTT---LEGHENEVKSVAWAPSGNLLATCSRDK-----SVWVWEVDEE 137 (345)
T ss_dssp EECCC-EEEEEE---ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECTT
T ss_pred EccCCCeEEEEE---ccCCCCCceEEEEeCCCCEEEEEECCC-----eEEEEECCCC
Confidence 877777655443 11111 112233335567777787654 3777887654
No 77
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.39 E-value=2.1 Score=44.80 Aligned_cols=227 Identities=11% Similarity=0.064 Sum_probs=113.4
Q ss_pred ECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCCCcEEE
Q 013179 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWV 106 (448)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~~~~~~ 106 (448)
..++.|++-. . .-+.+||+.++++........ ........-++.+.. ++.|+|- ... .-+++
T Consensus 381 d~~g~lWigt--~-----~GL~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~i~~d~~g~lWig-T~~-----~Gl~~ 443 (758)
T 3ott_A 381 DKEQQLWIAT--D-----GSINRYDYATRQFIHYNIVDN----TGTYNTNWTYYIFEDTAGQLWIS-TCL-----GGIFV 443 (758)
T ss_dssp CTTSCEEEEE--T-----TEEEEEETTTTEEEEEEEECC----C--CBSSSEEEEEECTTSEEEEE-ESS-----SCEEE
T ss_pred CCCCCEEEEe--C-----CcHhhcCcCCCcEEEeecCCC----cCCCCCceEEEEEEcCCCCEEEE-ECC-----CceEE
Confidence 3556677632 1 238999999999887653211 000011122334443 4577773 222 13788
Q ss_pred EECCC------CcEE---EeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCc
Q 013179 107 LDTDI------WQWS---ELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPP 177 (448)
Q Consensus 107 ~d~~t------~~W~---~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~ 177 (448)
||+.+ ..+. .......++.. .-.+.....++.|+++||.. +.+++||+.+++++.+... ..+..
T Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWi~~~t~-----~Gl~~~d~~~~~~~~~~~~-~~~~~ 516 (758)
T 3ott_A 444 VDKHKLMQSTSGQYIAEQNYSVHNGLSGM-FINQIIPDNEGNVWVLLYNN-----KGIDKINPRTREVTKLFAD-ELTGE 516 (758)
T ss_dssp EEHHHHHHCCSSEEECSEEECGGGTCSCS-CEEEEEECTTSCEEEEETTC-----SSEEEEETTTTEEEEECTT-TSCGG
T ss_pred EccccccccCCcceecccccccccccccc-eeeeEEEcCCCCEEEEccCC-----CCcEEEeCCCCceEEecCC-CcCCC
Confidence 88753 2231 11111122221 22334444567899876643 3589999999999987421 11111
Q ss_pred cCCceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCC
Q 013179 178 RCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTG 256 (448)
Q Consensus 178 r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~ 256 (448)
..-.++... ++.|++ |.. ..+.+||+++++++..... .+|.. .-.+++..++.|++-..
T Consensus 517 ~~~~~i~~d~~g~lWi-gt~-------------~Gl~~~~~~~~~~~~~~~~-gl~~~-~i~~i~~~~g~lWi~t~---- 576 (758)
T 3ott_A 517 KSPNYLLCDEDGLLWV-GFH-------------GGVMRINPKDESQQSISFG-SFSNN-EILSMTCVKNSIWVSTT---- 576 (758)
T ss_dssp GCEEEEEECTTSCEEE-EET-------------TEEEEECC--CCCCBCCCC-C---C-CEEEEEEETTEEEEEES----
T ss_pred cccceEEECCCCCEEE-Eec-------------CceEEEecCCCceEEeccc-CCCcc-ceEEEEECCCCEEEECC----
Confidence 111122222 467775 332 1234568887777655321 23322 23344445778888652
Q ss_pred CCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEccCCC
Q 013179 257 GWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (448)
Q Consensus 257 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 312 (448)
+-+.+||+.+.+...... |...+..++....+.-+.|||..+
T Consensus 577 ----------~Gl~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~G~l~fG~~~G 618 (758)
T 3ott_A 577 ----------NGLWIIDRKTMDARQQNM----TNKRFTSLLFDPKEDCVYLGGADG 618 (758)
T ss_dssp ----------SCEEEEETTTCCEEEC------CCCCCSEEEEETTTTEEEEECBSE
T ss_pred ----------CCeEEEcCCCceeEEecC----CCCceeeeEEECCCCcEEEecCCc
Confidence 348999999988765432 222333222222233445666654
No 78
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.37 E-value=1.4 Score=40.00 Aligned_cols=224 Identities=10% Similarity=-0.057 Sum_probs=108.0
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEEC
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDT 109 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~ 109 (448)
++.+|+..-. ...+++||+.+++-..+.. + .+..+.+..-++++|+.. .+.+++||+
T Consensus 24 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~----------~-~~~~~i~~~~dG~l~v~~-------~~~l~~~d~ 80 (297)
T 3g4e_A 24 SNSLLFVDIP-----AKKVCRWDSFTKQVQRVTM----------D-APVSSVALRQSGGYVATI-------GTKFCALNW 80 (297)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTCCEEEEEC----------S-SCEEEEEEBTTSSEEEEE-------TTEEEEEET
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEeC----------C-CceEEEEECCCCCEEEEE-------CCeEEEEEC
Confidence 4678877643 2458999999887654431 1 122222222356666653 136999999
Q ss_pred CCCcEEEeecCCC-CCCcCcccEEEEECCcEEEEEecCCC------CccCCceEEEeCCCCceEeecCCCCCCCccCCce
Q 013179 110 DIWQWSELTSFGD-LPSPRDFAAASAIGNRKIVMYGGWDG------KKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHT 182 (448)
Q Consensus 110 ~t~~W~~~~~~~~-~p~~r~~~~~~~~~~~~iyv~GG~~~------~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~ 182 (448)
.+++++.+..... .+..+. ...++..++++|+-.-... ......+|++|+. .+...+.. ....+ ..
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~-~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~--~~~~p---ng 153 (297)
T 3g4e_A 81 KEQSAVVLATVDNDKKNNRF-NDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFD--QVDIS---NG 153 (297)
T ss_dssp TTTEEEEEEECCTTCSSEEE-EEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEE--EESBE---EE
T ss_pred CCCcEEEEEecCCCCCCCCC-CCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEee--ccccc---cc
Confidence 9999887764211 121121 2233445678877431111 0123468899875 33333321 11111 22
Q ss_pred eEEe--CCEEEEEcccCCCCCccCceeeeccccccc--CCCCceEEecCCCCCCC-CCceeEEEE-eCCEEEEEcCCCCC
Q 013179 183 ATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEE--NETPGWTQLKLPGQAPS-SRCGHTITS-GGHYLLLFGGHGTG 256 (448)
Q Consensus 183 ~~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd--~~~~~W~~~~~~g~~p~-~r~~~~~~~-~~~~i~v~GG~~~~ 256 (448)
++.. ++.+|+..... ..+..|| +++........-...+. ...-..+++ .++.||+.....
T Consensus 154 i~~spdg~~lyv~~~~~------------~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-- 219 (297)
T 3g4e_A 154 LDWSLDHKIFYYIDSLS------------YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-- 219 (297)
T ss_dssp EEECTTSCEEEEEEGGG------------TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT--
T ss_pred eEEcCCCCEEEEecCCC------------CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC--
Confidence 3333 34677765432 1223333 34544421110001111 111224444 456888865221
Q ss_pred CCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEEC---CEEEEEccCC
Q 013179 257 GWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLG---SLYLLFGGFD 311 (448)
Q Consensus 257 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~---~~i~v~GG~~ 311 (448)
+.|++||+++.+....-.. |..+ -.+++.-+ +.|||.....
T Consensus 220 ----------~~v~~~d~~tG~~~~~i~~---p~~~-~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 220 ----------GRVIRLDPVTGKRLQTVKL---PVDK-TTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp ----------TEEEEECTTTCCEEEEEEC---SSSB-EEEEEEESGGGCEEEEEEBCT
T ss_pred ----------CEEEEEcCCCceEEEEEEC---CCCC-ceEEEEeCCCCCEEEEEcCCc
Confidence 3599999987665433222 2222 22222222 4788876543
No 79
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.33 E-value=1.5 Score=39.46 Aligned_cols=212 Identities=9% Similarity=-0.004 Sum_probs=105.8
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCCc--EEeeeecCCCCCCCCCCC-CCcceeEEEECCeEEEEcccCCCCCCCcEEEE
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNKL--WFQPECTGNGSNGQVGPG-PRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~p~-~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~ 107 (448)
+.+++.|..+ +.+..+|.++++ |+.-. +. ....+..+.-++++++.+. +.+..|
T Consensus 5 ~~~lv~~~~~-----~~v~~~d~~tG~~~w~~~~-----------~~~~~~~~~~~~pdG~ilvs~~-------~~V~~~ 61 (276)
T 3no2_A 5 QHLLVGGSGW-----NKIAIINKDTKEIVWEYPL-----------EKGWECNSVAATKAGEILFSYS-------KGAKMI 61 (276)
T ss_dssp CEEEEECTTC-----SEEEEEETTTTEEEEEEEC-----------CTTCCCCEEEECTTSCEEEECB-------SEEEEE
T ss_pred CcEEEeeCCC-----CEEEEEECCCCeEEEEeCC-----------CccCCCcCeEECCCCCEEEeCC-------CCEEEE
Confidence 5677776543 458889998875 65432 11 1223334445778888321 348999
Q ss_pred ECCCCc--EEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc-eEeecCCCCCCCc--cCCce
Q 013179 108 DTDIWQ--WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE-WMQLPVTGSVPPP--RCGHT 182 (448)
Q Consensus 108 d~~t~~--W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~-W~~~~~~~~~p~~--r~~~~ 182 (448)
|+ +++ |+.-. +.....+++....++.+++..... ...++.+|++-.. |+. ...+..+.+ .....
T Consensus 62 d~-~G~~~W~~~~-----~~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~-~~~~~~~~~~~~~~~v 130 (276)
T 3no2_A 62 TR-DGRELWNIAA-----PAGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKT-EFETGIERPHAQFRQI 130 (276)
T ss_dssp CT-TSCEEEEEEC-----CTTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEE-EECCSCSSGGGSCSCC
T ss_pred CC-CCCEEEEEcC-----CCCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEE-eccCCCCcccccccCc
Confidence 99 443 65432 222234555666677777765421 1347888875432 332 211111111 11122
Q ss_pred eEEeCCEEEEEcccCCCCCccCceeeecccccccCCC-CceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCccc
Q 013179 183 ATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENET-PGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSR 261 (448)
Q Consensus 183 ~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~-~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~ 261 (448)
....++.+++..... ..+..||++. ..|+.-. . ..| ..+....++.++|.+..+
T Consensus 131 ~~~~~G~~lv~~~~~------------~~v~~~d~~G~~~w~~~~-~-~~~----~~~~~~~~g~~~v~~~~~------- 185 (276)
T 3no2_A 131 NKNKKGNYLVPLFAT------------SEVREIAPNGQLLNSVKL-S-GTP----FSSAFLDNGDCLVACGDA------- 185 (276)
T ss_dssp EECTTSCEEEEETTT------------TEEEEECTTSCEEEEEEC-S-SCC----CEEEECTTSCEEEECBTT-------
T ss_pred eECCCCCEEEEecCC------------CEEEEECCCCCEEEEEEC-C-CCc----cceeEcCCCCEEEEeCCC-------
Confidence 233355555543321 2345567763 3354432 1 111 113333567788776532
Q ss_pred ccceeCcEEEEEcCCCc--eEEeccCCCCCCCcc--ceEEEEE-CCEEEEEc
Q 013179 262 YDIYYNDTIILDRLSAQ--WKRLPIGNEPPPARA--YHSMTCL-GSLYLLFG 308 (448)
Q Consensus 262 ~~~~~~~v~~yd~~~~~--W~~~~~~~~~p~~r~--~~~~~~~-~~~i~v~G 308 (448)
..+..+|+.+.+ |+.-... .+..|. -.++... ++.+||..
T Consensus 186 -----~~v~~~d~~tG~~~w~~~~~~--~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 186 -----HCFVQLNLESNRIVRRVNAND--IEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp -----SEEEEECTTTCCEEEEEEGGG--SBSCCCSEEEEEEECTTSCEEEEE
T ss_pred -----CeEEEEeCcCCcEEEEecCCC--CCCccccccccceEcCCCCEEEEe
Confidence 358999998554 6554322 111122 2333333 67888776
No 80
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.20 E-value=1.9 Score=39.64 Aligned_cols=204 Identities=10% Similarity=-0.025 Sum_probs=100.1
Q ss_pred cEEEEEcCCCC-CcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEEC-CeEEEEcccCCCCCCCcEEEEE
Q 013179 31 SKVVVFGGLVD-KRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAID-CHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 31 ~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~-~~lyv~GG~~~~~~~~~~~~~d 108 (448)
+.+|+...... ......++++|+.+++-...-..+ .+....++.-+ +.+|+.+... +.++++|
T Consensus 53 ~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~----------~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d 117 (353)
T 3vgz_A 53 NALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND----------LKPFGATINNTTQTLWFGNTVN-----SAVTAID 117 (353)
T ss_dssp TEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES----------SCCCSEEEETTTTEEEEEETTT-----TEEEEEE
T ss_pred CEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC----------CCcceEEECCCCCEEEEEecCC-----CEEEEEe
Confidence 46666553211 112457999999988654332211 11122233333 4578776533 3699999
Q ss_pred CCCCcEEEeecCCCCCC-----cCcccEEEEECC-cEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCce
Q 013179 109 TDIWQWSELTSFGDLPS-----PRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHT 182 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~-----~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~ 182 (448)
+.+++-......+.... +..-+.++...+ +.+|+.+... -..++.+|+.+.+-...- .. ....-+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~---~~-~~~~~~~ 189 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAI---QN-TGKMSTG 189 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEE---CC-CCTTCCC
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEe---cC-CCCccce
Confidence 99887543332111111 011133344333 4677765321 234899999877654432 11 1111223
Q ss_pred eEEe--CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE--eCCEEEEEcCCCCCCC
Q 013179 183 ATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGW 258 (448)
Q Consensus 183 ~~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~ 258 (448)
++.. ++.+|+... . ..+..+|+.+.+-......+.........++++ .++.+|+.....
T Consensus 190 ~~~s~dg~~l~~~~~-~------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~---- 252 (353)
T 3vgz_A 190 LALDSEGKRLYTTNA-D------------GELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA---- 252 (353)
T ss_dssp CEEETTTTEEEEECT-T------------SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS----
T ss_pred EEECCCCCEEEEEcC-C------------CeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC----
Confidence 3333 346776543 1 123345777665443221111111112223343 355677765321
Q ss_pred cccccceeCcEEEEEcCCCceEEe
Q 013179 259 LSRYDIYYNDTIILDRLSAQWKRL 282 (448)
Q Consensus 259 ~~~~~~~~~~v~~yd~~~~~W~~~ 282 (448)
+.+++||+.+.+....
T Consensus 253 --------~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 253 --------AEVLVVDTRNGNILAK 268 (353)
T ss_dssp --------SEEEEEETTTCCEEEE
T ss_pred --------CEEEEEECCCCcEEEE
Confidence 5699999988776543
No 81
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.20 E-value=1.5 Score=40.32 Aligned_cols=114 Identities=11% Similarity=0.030 Sum_probs=53.0
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..++.|+.+ ..+.+||+.+++-...-.. .......+..-++..++.++.+.......+..||
T Consensus 84 ~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d 148 (369)
T 3zwl_B 84 CFTKYCVTGSAD-----YSIKLWDVSNGQCVATWKS----------PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYE 148 (369)
T ss_dssp TTSSEEEEEETT-----TEEEEEETTTCCEEEEEEC----------SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEE
T ss_pred CCCCEEEEEeCC-----CeEEEEECCCCcEEEEeec----------CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEE
Confidence 345566666653 3488899888765433211 1111222222245556665544222223566676
Q ss_pred CCCCc----EEEeecCC--C--CCCcC-cccEEEEECCcEEEEEecCCCCccCCceEEEeCCC
Q 013179 109 TDIWQ----WSELTSFG--D--LPSPR-DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (448)
Q Consensus 109 ~~t~~----W~~~~~~~--~--~p~~r-~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t 162 (448)
+.+.. +....... . ..... ...+++...++..++.|+.++ .+..||+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~ 206 (369)
T 3zwl_B 149 IERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG-----KISKYDVSN 206 (369)
T ss_dssp EEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS-----EEEEEETTT
T ss_pred ecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC-----EEEEEECCC
Confidence 64432 21111000 0 00000 122222334556677776543 488999887
No 82
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.13 E-value=0.93 Score=46.78 Aligned_cols=194 Identities=10% Similarity=-0.010 Sum_probs=96.7
Q ss_pred CceEEEEcCCCcEEeeeecCCCCCCCCCCCCCc-ceeEEEECCeEEEEcccCCCCCCCcEEEEECCCC-cEEEeecCCCC
Q 013179 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRA-FHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIW-QWSELTSFGDL 123 (448)
Q Consensus 46 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~-~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~-~W~~~~~~~~~ 123 (448)
..++++|+.+++-..+... ...... .+.+..-+++.++++..+.......++.+|+.++ ....+.....
T Consensus 235 ~~l~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~- 305 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTG--------EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD- 305 (706)
T ss_dssp EEEEEEETTTTEEEECCCC--------SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC-
T ss_pred eEEEEEECCCCceEeeccC--------CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC-
Confidence 5699999998876554311 011111 1222233555445544443334457999999998 7766643111
Q ss_pred CCcC-cccEEEEEC--CcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCce-eEEe-C-CEEEEEcccC
Q 013179 124 PSPR-DFAAASAIG--NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHT-ATMV-E-KRLLIYGGRG 197 (448)
Q Consensus 124 p~~r-~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~-~~~~-~-~~lyv~GG~~ 197 (448)
+... .....+... ++++++.+..++ ...+|.+|........+. ...... .. .... + +.||+.+...
T Consensus 306 ~~~~~~~~~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~---~~~~~v--~~~~~~spdg~~l~~~~~~~ 377 (706)
T 2z3z_A 306 KHYVEPLHPLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVT---KGEWEV--TNFAGFDPKGTRLYFESTEA 377 (706)
T ss_dssp SSCCCCCSCCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECC---CSSSCE--EEEEEECTTSSEEEEEESSS
T ss_pred CCeECccCCceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecC---CCCeEE--EeeeEEcCCCCEEEEEecCC
Confidence 1000 012223334 667666665443 356888887777777664 211111 11 1222 3 3566555432
Q ss_pred CCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCcccccceeCcEEEEEcCC
Q 013179 198 GGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLS 276 (448)
Q Consensus 198 ~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~ 276 (448)
.. ....+ +.+|.++...+.+.. ....++++. -+++.+++...+.. ....++++|+.+
T Consensus 378 ~~--~~~~l------~~~d~~~~~~~~l~~------~~~~~~~~~spdg~~l~~~~~~~~--------~p~~i~l~d~~~ 435 (706)
T 2z3z_A 378 SP--LERHF------YCIDIKGGKTKDLTP------ESGMHRTQLSPDGSAIIDIFQSPT--------VPRKVTVTNIGK 435 (706)
T ss_dssp CT--TCBEE------EEEETTCCCCEESCC------SSSEEEEEECTTSSEEEEEEECSS--------CSCEEEEEESSS
T ss_pred CC--ceEEE------EEEEcCCCCceeccC------CCceEEEEECCCCCEEEEEecCCC--------CCcEEEEEECCC
Confidence 21 11223 344777776665541 111234444 34454555432221 225689999887
Q ss_pred Cc
Q 013179 277 AQ 278 (448)
Q Consensus 277 ~~ 278 (448)
.+
T Consensus 436 ~~ 437 (706)
T 2z3z_A 436 GS 437 (706)
T ss_dssp CE
T ss_pred Ce
Confidence 76
No 83
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.04 E-value=1.2 Score=42.89 Aligned_cols=185 Identities=14% Similarity=0.081 Sum_probs=89.9
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEEC
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDT 109 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~ 109 (448)
++.+++.|+.+ ..+.+||+.+++-...- ......-.++...+..++.|+.++ .+..+|+
T Consensus 182 ~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~-----------~~h~~~v~~l~~~~~~l~s~s~dg-----~i~vwd~ 240 (435)
T 1p22_A 182 DERVIITGSSD-----STVRVWDVNTGEMLNTL-----------IHHCEAVLHLRFNNGMMVTCSKDR-----SIAVWDM 240 (435)
T ss_dssp CSSEEEEEETT-----SCEEEEESSSCCEEEEE-----------CCCCSCEEEEECCTTEEEEEETTS-----CEEEEEC
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEE-----------cCCCCcEEEEEEcCCEEEEeeCCC-----cEEEEeC
Confidence 35566667654 34888999887643221 111112233344566777777553 4888888
Q ss_pred CCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEeCCE
Q 013179 110 DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKR 189 (448)
Q Consensus 110 ~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~ 189 (448)
.+..-..... ........-.++.. ++..++.|+.++ .+..||+.+.+-...- ......-.+...++.
T Consensus 241 ~~~~~~~~~~--~~~~~~~~v~~~~~-~~~~l~s~~~dg-----~i~vwd~~~~~~~~~~-----~~~~~~v~~~~~~~~ 307 (435)
T 1p22_A 241 ASPTDITLRR--VLVGHRAAVNVVDF-DDKYIVSASGDR-----TIKVWNTSTCEFVRTL-----NGHKRGIACLQYRDR 307 (435)
T ss_dssp SSSSCCEEEE--EECCCSSCEEEEEE-ETTEEEEEETTS-----EEEEEETTTCCEEEEE-----ECCSSCEEEEEEETT
T ss_pred CCCCCceeee--EecCCCCcEEEEEe-CCCEEEEEeCCC-----eEEEEECCcCcEEEEE-----cCCCCcEEEEEeCCC
Confidence 7664321110 01111111222233 335556665433 4788998876543321 111111223334566
Q ss_pred EEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCcccccceeCcE
Q 013179 190 LLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDT 269 (448)
Q Consensus 190 lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v 269 (448)
+++.|+.++ .+..||..+.+-...- . ... ..-.++..++..++.|+.+ ..+
T Consensus 308 ~l~~g~~dg------------~i~iwd~~~~~~~~~~-~-~h~---~~v~~~~~~~~~l~sg~~d------------g~i 358 (435)
T 1p22_A 308 LVVSGSSDN------------TIRLWDIECGACLRVL-E-GHE---ELVRCIRFDNKRIVSGAYD------------GKI 358 (435)
T ss_dssp EEEEEETTS------------CEEEEETTTCCEEEEE-C-CCS---SCEEEEECCSSEEEEEETT------------SCE
T ss_pred EEEEEeCCC------------eEEEEECCCCCEEEEE-e-CCc---CcEEEEEecCCEEEEEeCC------------CcE
Confidence 677776542 2345576655432221 0 111 1112233366677777654 347
Q ss_pred EEEEcCCC
Q 013179 270 IILDRLSA 277 (448)
Q Consensus 270 ~~yd~~~~ 277 (448)
.+||+.+.
T Consensus 359 ~vwd~~~~ 366 (435)
T 1p22_A 359 KVWDLVAA 366 (435)
T ss_dssp EEEEHHHH
T ss_pred EEEECCCC
Confidence 88887543
No 84
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.03 E-value=1.1 Score=40.38 Aligned_cols=124 Identities=8% Similarity=-0.095 Sum_probs=67.7
Q ss_pred cEEEEECCcE-EEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEE-ECCeEEEEcccCCCCC
Q 013179 23 HSAVNIGKSK-VVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRR 100 (448)
Q Consensus 23 ~~~~~~~~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~-~~~~lyv~GG~~~~~~ 100 (448)
...+...++. +|+.+... ..+++||+.++ ...+.. +... -++++. -+++||+....
T Consensus 31 eg~~~d~~g~~l~~~~~~~-----~~i~~~~~~~~-~~~~~~----------~~~~-~~~l~~~~dg~l~v~~~~----- 88 (296)
T 3e5z_A 31 EGPVYVPARSAVIFSDVRQ-----NRTWAWSDDGQ-LSPEMH----------PSHH-QNGHCLNKQGHLIACSHG----- 88 (296)
T ss_dssp EEEEEEGGGTEEEEEEGGG-----TEEEEEETTSC-EEEEES----------SCSS-EEEEEECTTCCEEEEETT-----
T ss_pred cCCeEeCCCCEEEEEeCCC-----CEEEEEECCCC-eEEEEC----------CCCC-cceeeECCCCcEEEEecC-----
Confidence 3444444454 77777542 35899999988 555531 1111 233333 25678776432
Q ss_pred CCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEE----ecCC--------CCccCCceEEEeCCCCceEee
Q 013179 101 LGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMY----GGWD--------GKKWLSDVYVLDTISLEWMQL 168 (448)
Q Consensus 101 ~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~----GG~~--------~~~~~~~v~~yd~~t~~W~~~ 168 (448)
...+.+||+.+++...+...........-..++...++++|+. |... .......+++||+. ++...+
T Consensus 89 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 89 LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 1358999998888877642100111111223444567789886 4311 01113479999987 555554
Q ss_pred c
Q 013179 169 P 169 (448)
Q Consensus 169 ~ 169 (448)
.
T Consensus 168 ~ 168 (296)
T 3e5z_A 168 I 168 (296)
T ss_dssp E
T ss_pred e
Confidence 3
No 85
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.02 E-value=1.3 Score=44.38 Aligned_cols=152 Identities=13% Similarity=0.167 Sum_probs=73.1
Q ss_pred CcEEEEECCCCcEEEeecCCCC--------CCcCcccEEEEEC-CcEEEEEecCCCCccCCceEEEeCCCCceEeecCCC
Q 013179 102 GDFWVLDTDIWQWSELTSFGDL--------PSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTG 172 (448)
Q Consensus 102 ~~~~~~d~~t~~W~~~~~~~~~--------p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~ 172 (448)
+.+.++|..+.+-...-+...+ |.+|. .+.+... ++.+|+-... ...++.+|..+.+-..+.
T Consensus 248 ~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v-~~i~~s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~--- 318 (543)
T 1nir_A 248 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRV-AAIIASHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVT--- 318 (543)
T ss_dssp SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCE-EEEEECSSSSEEEEEETT-----TTEEEEEECTTSSSCEEE---
T ss_pred CeEEEEeccccccceeecccCcccCccccccCCce-EEEEECCCCCEEEEEECC-----CCeEEEEEecCCCcceeE---
Confidence 3578889988765443321111 12222 1222222 3355554321 346888888765422211
Q ss_pred CCCCccCCceeEEe-CCE-EEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEe-CCEEEE
Q 013179 173 SVPPPRCGHTATMV-EKR-LLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG-GHYLLL 249 (448)
Q Consensus 173 ~~p~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~-~~~i~v 249 (448)
.++..+.-|..+.. +++ +|+.+..+ +.+..+|.++.+-...-..+..|.+..+.....- ++.+|+
T Consensus 319 ~i~~~~~~~~~~~spdg~~l~va~~~~------------~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~ 386 (543)
T 1nir_A 319 SIGAAPFLHDGGWDSSHRYFMTAANNS------------NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWS 386 (543)
T ss_dssp EEECCSSCCCEEECTTSCEEEEEEGGG------------TEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEE
T ss_pred EeccCcCccCceECCCCCEEEEEecCC------------CeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEE
Confidence 11223333444444 344 55443221 3344568888766543323344544333333222 367888
Q ss_pred EcCCCCCCCcccccceeCcEEEEEcCCC-----ceEEeccC
Q 013179 250 FGGHGTGGWLSRYDIYYNDTIILDRLSA-----QWKRLPIG 285 (448)
Q Consensus 250 ~GG~~~~~~~~~~~~~~~~v~~yd~~~~-----~W~~~~~~ 285 (448)
.+...+ +.|-++|+.+. .|+.+...
T Consensus 387 s~~~~d-----------~~V~v~d~~~~~~~~~~~~~v~~l 416 (543)
T 1nir_A 387 TSHLGD-----------GSISLIGTDPKNHPQYAWKKVAEL 416 (543)
T ss_dssp EEBSSS-----------SEEEEEECCTTTCTTTBTSEEEEE
T ss_pred eccCCC-----------ceEEEEEeCCCCCchhcCeEEEEE
Confidence 764332 35777787662 27766554
No 86
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.00 E-value=1.3 Score=40.03 Aligned_cols=197 Identities=9% Similarity=-0.054 Sum_probs=98.8
Q ss_pred EEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEE----cccCC----
Q 013179 26 VNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIF----GGRFG---- 97 (448)
Q Consensus 26 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~----GG~~~---- 97 (448)
++..++.+|+.... ...+.+||+.+++...+..... ..+..+....++.-+++||+. |....
T Consensus 75 ~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~~~~~-----~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~ 144 (296)
T 3e5z_A 75 CLNKQGHLIACSHG-----LRRLERQREPGGEWESIADSFE-----GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGY 144 (296)
T ss_dssp EECTTCCEEEEETT-----TTEEEEECSTTCCEEEEECEET-----TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSS
T ss_pred eECCCCcEEEEecC-----CCeEEEEcCCCCcEEEEeeccC-----CCCCCCCCCEEECCCCCEEEECCccccccccccc
Confidence 33355667765432 1358999998888776542210 111112223333346788886 44210
Q ss_pred ----CCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCC-CCce-EeecCC
Q 013179 98 ----SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI-SLEW-MQLPVT 171 (448)
Q Consensus 98 ----~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~-t~~W-~~~~~~ 171 (448)
......++++|+. ++...+.. ... .-...+...++++++.... .+.+++||+. +++. ......
T Consensus 145 ~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~---~~~gi~~s~dg~~lv~~~~-----~~~i~~~~~~~~g~~~~~~~~~ 213 (296)
T 3e5z_A 145 GGEMELPGRWVFRLAPD-GTLSAPIR--DRV---KPNGLAFLPSGNLLVSDTG-----DNATHRYCLNARGETEYQGVHF 213 (296)
T ss_dssp CCCCCSSSCEEEEECTT-SCEEEEEC--CCS---SEEEEEECTTSCEEEEETT-----TTEEEEEEECSSSCEEEEEEEE
T ss_pred cccccCCCcEEEEECCC-CCEEEeec--CCC---CCccEEECCCCCEEEEeCC-----CCeEEEEEECCCCcCcCCCeEe
Confidence 1113469999988 66555542 111 1133444455566644322 2458899886 4555 211110
Q ss_pred CCCCCccCCceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE---eCCEE
Q 013179 172 GSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS---GGHYL 247 (448)
Q Consensus 172 ~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~---~~~~i 247 (448)
......- ..++.. ++.||+..+ ..+.+||++......+..+ .. -.+++. .++.|
T Consensus 214 -~~~~~~p-~~i~~d~~G~l~v~~~--------------~~v~~~~~~g~~~~~~~~~----~~--~~~~~f~~~d~~~L 271 (296)
T 3e5z_A 214 -TVEPGKT-DGLRVDAGGLIWASAG--------------DGVHVLTPDGDELGRVLTP----QT--TSNLCFGGPEGRTL 271 (296)
T ss_dssp -CCSSSCC-CSEEEBTTSCEEEEET--------------TEEEEECTTSCEEEEEECS----SC--CCEEEEESTTSCEE
T ss_pred -eCCCCCC-CeEEECCCCCEEEEcC--------------CeEEEECCCCCEEEEEECC----CC--ceeEEEECCCCCEE
Confidence 1111111 123333 677887661 2345568876655555532 22 112233 12367
Q ss_pred EEEcCCCCCCCcccccceeCcEEEEEcCCCce
Q 013179 248 LLFGGHGTGGWLSRYDIYYNDTIILDRLSAQW 279 (448)
Q Consensus 248 ~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W 279 (448)
|+... +.+|+|++++++-
T Consensus 272 ~v~t~--------------~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 272 YMTVS--------------TEFWSIETNVRGL 289 (296)
T ss_dssp EEEET--------------TEEEEEECSCCBC
T ss_pred EEEcC--------------CeEEEEEcccccc
Confidence 77542 3599999887653
No 87
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.94 E-value=1.1 Score=41.97 Aligned_cols=177 Identities=11% Similarity=0.046 Sum_probs=83.5
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECC-cEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
+++.++.|+.++ .+..+|+.+++-...-. .... .-.+++...+ ..+++.|+.++ .+..||+.+.+
T Consensus 138 dg~~l~sgs~d~-----~i~iwd~~~~~~~~~~~---~h~~-~V~~~~~~~~~~~~l~s~s~D~-----~v~iwd~~~~~ 203 (344)
T 4gqb_B 138 SGTQAVSGSKDI-----CIKVWDLAQQVVLSSYR---AHAA-QVTCVAASPHKDSVFLSCSEDN-----RILLWDTRCPK 203 (344)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTTEEEEEEC---CCSS-CEEEEEECSSCTTEEEEEETTS-----CEEEEETTSSS
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEEEc---CcCC-ceEEEEecCCCCCceeeecccc-----ccccccccccc
Confidence 667777777654 48889998876433221 1111 1122222222 25777777654 37888988766
Q ss_pred eEeecCCCCCCCccCCc-eeEEe--CCEEEEEcccCCCCCccCceeeecccccccCCCCce-EEecCCCCCCCCCceeEE
Q 013179 165 WMQLPVTGSVPPPRCGH-TATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGW-TQLKLPGQAPSSRCGHTI 240 (448)
Q Consensus 165 W~~~~~~~~~p~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W-~~~~~~g~~p~~r~~~~~ 240 (448)
-...- ......... ++... ++++++.|+.++ .+..||..+.+- ..+.. . ...-.++
T Consensus 204 ~~~~~---~~~~~~~~~~~~~~~p~~~~~l~sg~~dg------------~v~~wd~~~~~~~~~~~~----h-~~~v~~v 263 (344)
T 4gqb_B 204 PASQI---GCSAPGYLPTSLAWHPQQSEVFVFGDENG------------TVSLVDTKSTSCVLSSAV----H-SQCVTGL 263 (344)
T ss_dssp CEEEC---C----CCCEEEEEECSSCTTEEEEEETTS------------EEEEEESCC--CCEEEEC----C-SSCEEEE
T ss_pred eeeee---ecceeeccceeeeecCCCCcceEEeccCC------------cEEEEECCCCcEEEEEcC----C-CCCEEEE
Confidence 44321 111111111 22222 456777777543 233446554432 12220 1 1111233
Q ss_pred EEe--CCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEE--CCEEEEEccCCCC
Q 013179 241 TSG--GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL--GSLYLLFGGFDGK 313 (448)
Q Consensus 241 ~~~--~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 313 (448)
+.. +..+++.|+.+ ..+.++|..+.+-..+... ...-.+++.. +..+++-||.++.
T Consensus 264 ~fsp~g~~~lasgs~D------------~~i~vwd~~~~~~~~~~~H-----~~~V~~v~~sp~~~~llas~s~D~~ 323 (344)
T 4gqb_B 264 VFSPHSVPFLASLSED------------CSLAVLDSSLSELFRSQAH-----RDFVRDATWSPLNHSLLTTVGWDHQ 323 (344)
T ss_dssp EECSSSSCCEEEEETT------------SCEEEECTTCCEEEEECCC-----SSCEEEEEECSSSTTEEEEEETTSC
T ss_pred EEccCCCeEEEEEeCC------------CeEEEEECCCCcEEEEcCC-----CCCEEEEEEeCCCCeEEEEEcCCCe
Confidence 332 33566666543 2478888887754433221 1112223222 3457777887654
No 88
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.94 E-value=2.2 Score=39.11 Aligned_cols=211 Identities=10% Similarity=0.006 Sum_probs=101.0
Q ss_pred EEEEECCc-EEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE--CCeEEEEcccCCCCC
Q 013179 24 SAVNIGKS-KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRR 100 (448)
Q Consensus 24 ~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv~GG~~~~~~ 100 (448)
...+..++ .+|+.+..+ +.+++||+.+++-...-..+.+.. +....+..-+.++.. ++.+|+.+...
T Consensus 93 ~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~dg~~l~~~~~~~---- 162 (353)
T 3vgz_A 93 GATINNTTQTLWFGNTVN-----SAVTAIDAKTGEVKGRLVLDDRKR-TEEVRPLQPRELVADDATNTVYISGIGK---- 162 (353)
T ss_dssp SEEEETTTTEEEEEETTT-----TEEEEEETTTCCEEEEEESCCCCC-CSSCCCCEEEEEEEETTTTEEEEEEESS----
T ss_pred eEEECCCCCEEEEEecCC-----CEEEEEeCCCCeeEEEEecCCCcc-ccccCCCCCceEEECCCCCEEEEEecCC----
Confidence 33444333 466665532 368999999887433222111000 000001112333332 45677776322
Q ss_pred CCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECC-cEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccC
Q 013179 101 LGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRC 179 (448)
Q Consensus 101 ~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~ 179 (448)
...++++|+.+.+-....+ . ....-+.++...+ +.+|+... -+.++.||+.+.+-......+.......
T Consensus 163 ~~~i~~~d~~~~~~~~~~~---~-~~~~~~~~~~s~dg~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 232 (353)
T 3vgz_A 163 ESVIWVVDGGNIKLKTAIQ---N-TGKMSTGLALDSEGKRLYTTNA------DGELITIDTADNKILSRKKLLDDGKEHF 232 (353)
T ss_dssp SCEEEEEETTTTEEEEEEC---C-CCTTCCCCEEETTTTEEEEECT------TSEEEEEETTTTEEEEEEECCCSSSCCC
T ss_pred CceEEEEcCCCCceEEEec---C-CCCccceEEECCCCCEEEEEcC------CCeEEEEECCCCeEEEEEEcCCCCCCcc
Confidence 2359999999887544332 1 1111233333333 35666532 2468899998876543321111111111
Q ss_pred CceeEEe--CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCC
Q 013179 180 GHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGG 257 (448)
Q Consensus 180 ~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~ 257 (448)
...++.. ++.+|+..... ..+..||+.+.+....-. .+.+ ...+....++.+|+....+
T Consensus 233 ~~~~~~s~dg~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~---~~~~-~~~~~s~dg~~l~v~~~~~--- 293 (353)
T 3vgz_A 233 FINISLDTARQRAFITDSKA------------AEVLVVDTRNGNILAKVA---APES-LAVLFNPARNEAYVTHRQA--- 293 (353)
T ss_dssp EEEEEEETTTTEEEEEESSS------------SEEEEEETTTCCEEEEEE---CSSC-CCEEEETTTTEEEEEETTT---
T ss_pred cceEEECCCCCEEEEEeCCC------------CEEEEEECCCCcEEEEEE---cCCC-ceEEECCCCCEEEEEECCC---
Confidence 1123333 45677664321 334456887776543321 1222 1112222345688776432
Q ss_pred CcccccceeCcEEEEEcCCCceEEe
Q 013179 258 WLSRYDIYYNDTIILDRLSAQWKRL 282 (448)
Q Consensus 258 ~~~~~~~~~~~v~~yd~~~~~W~~~ 282 (448)
+.+.++|+.+.+....
T Consensus 294 ---------~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 294 ---------GKVSVIDAKSYKVVKT 309 (353)
T ss_dssp ---------TEEEEEETTTTEEEEE
T ss_pred ---------CeEEEEECCCCeEEEE
Confidence 4689999988765543
No 89
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.94 E-value=1.4 Score=40.72 Aligned_cols=202 Identities=11% Similarity=0.062 Sum_probs=97.3
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEEC--CeEEEEcccCCCCCCCcEEEEE
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAID--CHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~--~~lyv~GG~~~~~~~~~~~~~d 108 (448)
+.+++.|+.++ .+.+||+.+++|..+..... ........+..-+ +.+++.|+.++ .+..||
T Consensus 69 ~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d 131 (379)
T 3jrp_A 69 GTILASCSYDG-----KVLIWKEENGRWSQIAVHAV-------HSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVE 131 (379)
T ss_dssp CSEEEEEETTS-----CEEEEEEETTEEEEEEEECC-------CSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEE
T ss_pred CCEEEEeccCC-----EEEEEEcCCCceeEeeeecC-------CCcceEEEEeCCCCCCCEEEEecCCC-----cEEEEe
Confidence 56777777643 48889999998877654321 1111111222223 56777776543 478888
Q ss_pred CCCCcE-EEeecCCCCCCcCcccEEEEEC-------------CcEEEEEecCCCCccCCceEEEeCCCC--ceEeecCCC
Q 013179 109 TDIWQW-SELTSFGDLPSPRDFAAASAIG-------------NRKIVMYGGWDGKKWLSDVYVLDTISL--EWMQLPVTG 172 (448)
Q Consensus 109 ~~t~~W-~~~~~~~~~p~~r~~~~~~~~~-------------~~~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~ 172 (448)
+.+..- ...... .. ...-.+++... ++.+++.|+.++ .+..||+.+. .+..+.
T Consensus 132 ~~~~~~~~~~~~~-~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~--- 200 (379)
T 3jrp_A 132 FKENGTTSPIIID-AH--AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLES--- 200 (379)
T ss_dssp CCTTSCCCEEEEE-CC--TTCEEEEEECCCC----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEE---
T ss_pred cCCCCceeeEEec-CC--CCceEEEEEcCccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEE---
Confidence 876632 111100 00 11111222222 457777787654 3677776543 344432
Q ss_pred CCCCccC-CceeEEe-C---CEEEEEcccCCCCCccCceeeecccccccCCCC--ceEEecCCCCCCCCCceeEEEE-eC
Q 013179 173 SVPPPRC-GHTATMV-E---KRLLIYGGRGGGGPIMGDLWALKGLIEEENETP--GWTQLKLPGQAPSSRCGHTITS-GG 244 (448)
Q Consensus 173 ~~p~~r~-~~~~~~~-~---~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~--~W~~~~~~g~~p~~r~~~~~~~-~~ 244 (448)
.+..... -.+++.. + +.+++.|+.++. +..||..+. .+...... .......-.+++. .+
T Consensus 201 ~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~------------i~iwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~ 267 (379)
T 3jrp_A 201 TLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT------------CIIWTQDNEQGPWKKTLLK-EEKFPDVLWRASWSLS 267 (379)
T ss_dssp EECCCSSCEEEEEECCCCSSSEEEEEEETTSC------------EEEEEESSTTSCCEEEESS-SSCCSSCEEEEEECSS
T ss_pred EEecccCcEeEEEECCCCCCCCeEEEEeCCCE------------EEEEeCCCCCccceeeeec-cccCCCcEEEEEEcCC
Confidence 1111111 1122333 3 678888876532 223344443 22222111 1111111223333 35
Q ss_pred CEEEEEcCCCCCCCcccccceeCcEEEEEcC-CCceEEeccC
Q 013179 245 HYLLLFGGHGTGGWLSRYDIYYNDTIILDRL-SAQWKRLPIG 285 (448)
Q Consensus 245 ~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~-~~~W~~~~~~ 285 (448)
+.+++.|+.+ ..+.+||+. ...|..+...
T Consensus 268 g~~l~~~~~d------------g~i~iw~~~~~~~~~~~~~~ 297 (379)
T 3jrp_A 268 GNVLALSGGD------------NKVTLWKENLEGKWEPAGEV 297 (379)
T ss_dssp SCCEEEEESS------------SSEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEecCC------------CcEEEEeCCCCCccccccce
Confidence 5666666643 247777776 5678777654
No 90
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.91 E-value=0.86 Score=47.19 Aligned_cols=214 Identities=13% Similarity=0.059 Sum_probs=108.5
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCC--------CC
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS--------RR 100 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~--------~~ 100 (448)
.+++.++|.-..++.....++++|+.+++..... ..+..+....+..-+++.++++..... ..
T Consensus 130 PDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~---------~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~ 200 (695)
T 2bkl_A 130 WDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD---------VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPG 200 (695)
T ss_dssp TTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC---------CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGG
T ss_pred CCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc---------ccCcccccceEEecCCCEEEEEEecCCCCCccccCCC
Confidence 4566666544323333457999999998753111 111122223333446666666655432 23
Q ss_pred CCcEEEEECCCCcE--EEeecCCCCCC-cCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCc
Q 013179 101 LGDFWVLDTDIWQW--SELTSFGDLPS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPP 177 (448)
Q Consensus 101 ~~~~~~~d~~t~~W--~~~~~~~~~p~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~ 177 (448)
...++++++.+.+- ..+.. .+. ...........+++..++...... ..++++.+|..+..++.+.. ...
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~---~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~---~~~- 272 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHE---RTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVK---GVG- 272 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEEC---CCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEE---CSS-
T ss_pred CCEEEEEECCCCchhceEEEe---cCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEeec---CCC-
Confidence 45699999988763 23332 222 223334444455554444432221 24578888887888888752 111
Q ss_pred cCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCc---eEEecCCCCCCCCCceeEEEEeCCEEEEEcCCC
Q 013179 178 RCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPG---WTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHG 254 (448)
Q Consensus 178 r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~---W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~ 254 (448)
.....+..++.+|+....... ...+ ..+|+++.. |+.+... .+ ...-..+...++.+++....+
T Consensus 273 -~~~~~~~~~g~l~~~s~~~~~---~~~l------~~~d~~~~~~~~~~~l~~~--~~-~~~l~~~~~~~~~lv~~~~~d 339 (695)
T 2bkl_A 273 -AKYEVHAWKDRFYVLTDEGAP---RQRV------FEVDPAKPARASWKEIVPE--DS-SASLLSVSIVGGHLSLEYLKD 339 (695)
T ss_dssp -CCEEEEEETTEEEEEECTTCT---TCEE------EEEBTTBCSGGGCEEEECC--CS-SCEEEEEEEETTEEEEEEEET
T ss_pred -ceEEEEecCCcEEEEECCCCC---CCEE------EEEeCCCCCccCCeEEecC--CC-CCeEEEEEEECCEEEEEEEEC
Confidence 112222345666655433211 1223 334665544 8877521 11 122223444588888776433
Q ss_pred CCCCcccccceeCcEEEEEcCCCceEEe
Q 013179 255 TGGWLSRYDIYYNDTIILDRLSAQWKRL 282 (448)
Q Consensus 255 ~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 282 (448)
. ...+|++++....-..+
T Consensus 340 g----------~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 340 A----------TSEVRVATLKGKPVRTV 357 (695)
T ss_dssp T----------EEEEEEEETTCCEEEEC
T ss_pred C----------EEEEEEEeCCCCeeEEe
Confidence 2 35688888765544444
No 91
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.90 E-value=2.5 Score=39.58 Aligned_cols=110 Identities=14% Similarity=0.014 Sum_probs=58.6
Q ss_pred EEEEECCcEEEEEcCCCCCcccCceEEEEcCCCc-------EEeeeecCCCCCCCCCCCCCcceeEEEEC----C---eE
Q 013179 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKL-------WFQPECTGNGSNGQVGPGPRAFHIAVAID----C---HM 89 (448)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-------W~~~~~~~~~~~~~~~p~~R~~h~~~~~~----~---~l 89 (448)
.++.... .+++.|+.+ ..+.+||+.+.. -..+.. ........+..-+ + .+
T Consensus 20 ~~~~~~~-~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~----------h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 20 FSVSACN-SFTVSCSGD-----GYLKVWDNKLLDNENPKDKSYSHFV----------HKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEEEECS-SEEEEEETT-----SEEEEEESBCCTTCCGGGGEEEEEC----------CTTCEEEEEEEEEEETTTEEEEE
T ss_pred EEEEecC-CeEEEEcCC-----CEEEEEECCCcccccCCCcceEEec----------CCCcEEEEEEecccccCCccccE
Confidence 4444554 577777754 358889998876 333321 1112222233334 6 77
Q ss_pred EEEcccCCCCCCCcEEEEECCCCc------EEEeecCCCCCC---cCcccEEEEE----CCcEE-EEEecCCCCccCCce
Q 013179 90 FIFGGRFGSRRLGDFWVLDTDIWQ------WSELTSFGDLPS---PRDFAAASAI----GNRKI-VMYGGWDGKKWLSDV 155 (448)
Q Consensus 90 yv~GG~~~~~~~~~~~~~d~~t~~------W~~~~~~~~~p~---~r~~~~~~~~----~~~~i-yv~GG~~~~~~~~~v 155 (448)
++.|+.++ .+..||+.+.+ +..+.. .+. ...-.+++.. .++.. ++.|+.++ .+
T Consensus 84 l~s~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-----~i 150 (397)
T 1sq9_A 84 VATTSFSG-----DLLFYRITREDETKKVIFEKLDL---LDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-----TT 150 (397)
T ss_dssp EEEEETTS-----CEEEEEEEECTTTCCEEEEEECC---SCTTGGGSCEEEEEEECCC----CEEEEEEETTS-----CE
T ss_pred EEEEcCCC-----CEEEEEccCCcccccccceeecc---cccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-----cE
Confidence 77777543 47888887766 666542 211 1222334444 45566 77777543 36
Q ss_pred EEEeCCC
Q 013179 156 YVLDTIS 162 (448)
Q Consensus 156 ~~yd~~t 162 (448)
..||+.+
T Consensus 151 ~iwd~~~ 157 (397)
T 1sq9_A 151 YIWKFHP 157 (397)
T ss_dssp EEEEEES
T ss_pred EEEeCCc
Confidence 7777665
No 92
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.85 E-value=2.4 Score=39.13 Aligned_cols=221 Identities=10% Similarity=-0.027 Sum_probs=102.0
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++.+++.|+.++ .+.++|..+.+-...-. .........+..-++.+++.||.++ .+..||
T Consensus 65 ~d~~~l~s~s~Dg-----~v~iWd~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~s~~~d~-----~v~iw~ 125 (340)
T 1got_B 65 TDSRLLLSASQDG-----KLIIWDSYTTNKVHAIP---------LRSSWVMTCAYAPSGNYVACGGLDN-----ICSIYN 125 (340)
T ss_dssp TTSSEEEEEETTT-----EEEEEETTTCCEEEEEE---------CSSSCEEEEEECTTSSEEEEEETTC-----EEEEEE
T ss_pred CCCCEEEEEeCCC-----cEEEEECCCCCcceEee---------cCCccEEEEEECCCCCEEEEEeCCC-----eEEEEE
Confidence 4567777787653 48888988775322211 1111111222223566777777553 477888
Q ss_pred CCCCc--EEEeecCCCCCCcC-cccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEE
Q 013179 109 TDIWQ--WSELTSFGDLPSPR-DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATM 185 (448)
Q Consensus 109 ~~t~~--W~~~~~~~~~p~~r-~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~ 185 (448)
+.+.. ...... +.... .-.++....++. ++.|+.+ ..+..||+.+.+-...- ..... .-.++..
T Consensus 126 ~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~-l~s~s~d-----~~i~~wd~~~~~~~~~~---~~h~~-~v~~~~~ 192 (340)
T 1got_B 126 LKTREGNVRVSRE---LAGHTGYLSCCRFLDDNQ-IVTSSGD-----TTCALWDIETGQQTTTF---TGHTG-DVMSLSL 192 (340)
T ss_dssp TTTCSBSCEEEEE---EECCSSCEEEEEEEETTE-EEEEETT-----SCEEEEETTTTEEEEEE---CCCSS-CEEEEEE
T ss_pred CccCCCcceeEEE---ecCCCccEEEEEECCCCc-EEEEECC-----CcEEEEECCCCcEEEEE---cCCCC-ceEEEEE
Confidence 87643 111111 11111 111222234445 4455443 34788998877644321 10111 1112222
Q ss_pred e-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCccccc
Q 013179 186 V-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYD 263 (448)
Q Consensus 186 ~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~ 263 (448)
. ++.+++.|+.++. +..||+.+..-...- ..... .-.+++. -++.+++.|+.+
T Consensus 193 ~~~~~~l~sg~~d~~------------v~~wd~~~~~~~~~~---~~h~~-~v~~v~~~p~~~~l~s~s~d--------- 247 (340)
T 1got_B 193 APDTRLFVSGACDAS------------AKLWDVREGMCRQTF---TGHES-DINAICFFPNGNAFATGSDD--------- 247 (340)
T ss_dssp CTTSSEEEEEETTSC------------EEEEETTTCSEEEEE---CCCSS-CEEEEEECTTSSEEEEEETT---------
T ss_pred CCCCCEEEEEeCCCc------------EEEEECCCCeeEEEE---cCCcC-CEEEEEEcCCCCEEEEEcCC---------
Confidence 2 5667777776432 334566554432211 00111 1123333 345667777644
Q ss_pred ceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEE--CCEEEEEccCCC
Q 013179 264 IYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL--GSLYLLFGGFDG 312 (448)
Q Consensus 264 ~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 312 (448)
..+.+||+.+.+-...-... .....-..+.+ ++++++.|+.++
T Consensus 248 ---~~v~iwd~~~~~~~~~~~~~---~~~~~v~~~~~s~~g~~l~~g~~d~ 292 (340)
T 1got_B 248 ---ATCRLFDLRADQELMTYSHD---NIICGITSVSFSKSGRLLLAGYDDF 292 (340)
T ss_dssp ---SCEEEEETTTTEEEEEECCT---TCCSCEEEEEECTTSSEEEEEETTS
T ss_pred ---CcEEEEECCCCcEEEEEccC---CcccceEEEEECCCCCEEEEECCCC
Confidence 34788888766432221111 11111222222 467777887654
No 93
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=94.82 E-value=1.2 Score=39.27 Aligned_cols=192 Identities=10% Similarity=-0.012 Sum_probs=95.9
Q ss_pred cEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCC
Q 013179 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRL 101 (448)
Q Consensus 23 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~ 101 (448)
+.+++..++.+|+... . ..+++||+.......+.. .....-+.++.. +++||+.....
T Consensus 70 ~~i~~~~~g~l~v~~~-~-----~~i~~~d~~~~~~~~~~~----------~~~~~p~~i~~~~~g~l~v~~~~~----- 128 (270)
T 1rwi_B 70 QGLAVDGAGTVYVTDF-N-----NRVVTLAAGSNNQTVLPF----------DGLNYPEGLAVDTQGAVYVADRGN----- 128 (270)
T ss_dssp CCEEECTTCCEEEEET-T-----TEEEEECTTCSCCEECCC----------CSCSSEEEEEECTTCCEEEEEGGG-----
T ss_pred ceeEECCCCCEEEEcC-C-----CEEEEEeCCCceEeeeec----------CCcCCCcceEECCCCCEEEEECCC-----
Confidence 3444444566777654 1 358888887765443321 111122333333 56788875432
Q ss_pred CcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCc
Q 013179 102 GDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH 181 (448)
Q Consensus 102 ~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~ 181 (448)
..++++|..+........ .....-..++...++++|+.... ...+++||+....-...... .. ..-.
T Consensus 129 ~~i~~~~~~~~~~~~~~~----~~~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~-~~---~~p~ 195 (270)
T 1rwi_B 129 NRVVKLAAGSKTQTVLPF----TGLNDPDGVAVDNSGNVYVTDTD-----NNRVVKLEAESNNQVVLPFT-DI---TAPW 195 (270)
T ss_dssp TEEEEECTTCCSCEECCC----CSCCSCCCEEECTTCCEEEEEGG-----GTEEEEECTTTCCEEECCCS-SC---CSEE
T ss_pred CEEEEEECCCceeEeecc----ccCCCceeEEEeCCCCEEEEECC-----CCEEEEEecCCCceEeeccc-CC---CCce
Confidence 358888876665443321 11112233444456688887532 24589999887664433211 11 1112
Q ss_pred eeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCc
Q 013179 182 TATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWL 259 (448)
Q Consensus 182 ~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~ 259 (448)
.++.. ++.+|+..... ..+..||+.+..-...... ....-.++++ .++.||+....+
T Consensus 196 ~i~~d~~g~l~v~~~~~------------~~v~~~~~~~~~~~~~~~~----~~~~p~~i~~~~~g~l~v~~~~~----- 254 (270)
T 1rwi_B 196 GIAVDEAGTVYVTEHNT------------NQVVKLLAGSTTSTVLPFT----GLNTPLAVAVDSDRTVYVADRGN----- 254 (270)
T ss_dssp EEEECTTCCEEEEETTT------------SCEEEECTTCSCCEECCCC----SCSCEEEEEECTTCCEEEEEGGG-----
T ss_pred EEEECCCCCEEEEECCC------------CcEEEEcCCCCcceeeccC----CCCCceeEEECCCCCEEEEECCC-----
Confidence 23333 45788765322 2244557766544333211 1112234444 345788875432
Q ss_pred ccccceeCcEEEEEcCC
Q 013179 260 SRYDIYYNDTIILDRLS 276 (448)
Q Consensus 260 ~~~~~~~~~v~~yd~~~ 276 (448)
+.|.+|++..
T Consensus 255 -------~~v~~~~~~~ 264 (270)
T 1rwi_B 255 -------DRVVKLTSLE 264 (270)
T ss_dssp -------TEEEEECCCG
T ss_pred -------CEEEEEcCCC
Confidence 4577777654
No 94
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.79 E-value=1.7 Score=41.22 Aligned_cols=113 Identities=13% Similarity=0.030 Sum_probs=59.6
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcCCCcEE-----eeeecCCCCCCCCCCCCCcceeEEEECC-eEEEEcccCCCCCCCc
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWF-----QPECTGNGSNGQVGPGPRAFHIAVAIDC-HMFIFGGRFGSRRLGD 103 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-----~~~~~~~~~~~~~~p~~R~~h~~~~~~~-~lyv~GG~~~~~~~~~ 103 (448)
++.+++.|+.+ ..+.+||+.++... .+... ..........+..-++ .+++.|+.++ .
T Consensus 93 ~~~~l~s~s~d-----g~v~vw~~~~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~p~~~~~l~s~~~dg-----~ 155 (402)
T 2aq5_A 93 NDNVIASGSED-----CTVMVWEIPDGGLVLPLREPVITL-------EGHTKRVGIVAWHPTAQNVLLSAGCDN-----V 155 (402)
T ss_dssp CTTEEEEEETT-----SEEEEEECCTTCCSSCBCSCSEEE-------ECCSSCEEEEEECSSBTTEEEEEETTS-----C
T ss_pred CCCEEEEEeCC-----CeEEEEEccCCCCccccCCceEEe-------cCCCCeEEEEEECcCCCCEEEEEcCCC-----E
Confidence 56677878754 34888888876431 11110 0011111111222233 5777777553 4
Q ss_pred EEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceE
Q 013179 104 FWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (448)
Q Consensus 104 ~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (448)
+.++|+.+.+....-.. ......-.+++...++..++.|+.++ .+..||+.+.+-.
T Consensus 156 i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 156 ILVWDVGTGAAVLTLGP--DVHPDTIYSVDWSRDGALICTSCRDK-----RVRVIEPRKGTVV 211 (402)
T ss_dssp EEEEETTTTEEEEEECT--TTCCSCEEEEEECTTSSCEEEEETTS-----EEEEEETTTTEEE
T ss_pred EEEEECCCCCccEEEec--CCCCCceEEEEECCCCCEEEEEecCC-----cEEEEeCCCCcee
Confidence 89999998875543210 00111122333334566777776543 4889998876643
No 95
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.73 E-value=2.6 Score=40.22 Aligned_cols=67 Identities=7% Similarity=-0.084 Sum_probs=37.4
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCce
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (448)
++..++.|+.++ .+..+|+.++.-...-. ... .....+....++.+++.|+.++ .+..||+.+.+.
T Consensus 203 ~~~~l~s~s~D~-----~i~~wd~~~~~~~~~~~---~h~-~~v~~~~~~~~g~~l~s~s~D~-----~v~vwd~~~~~~ 268 (410)
T 1vyh_C 203 NGDHIVSASRDK-----TIKMWEVQTGYCVKTFT---GHR-EWVRMVRPNQDGTLIASCSNDQ-----TVRVWVVATKEC 268 (410)
T ss_dssp SSSEEEEEETTS-----EEEEEETTTCCEEEEEE---CCS-SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCE
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEEEe---CCC-ccEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCce
Confidence 556667777543 48889998876433221 111 1112222334567777777554 367777776654
Q ss_pred E
Q 013179 166 M 166 (448)
Q Consensus 166 ~ 166 (448)
.
T Consensus 269 ~ 269 (410)
T 1vyh_C 269 K 269 (410)
T ss_dssp E
T ss_pred e
Confidence 3
No 96
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=94.69 E-value=1.6 Score=45.08 Aligned_cols=211 Identities=9% Similarity=0.057 Sum_probs=108.5
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCC--------CC
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS--------RR 100 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~--------~~ 100 (448)
.+++.++|+-..++....+++++|+.+++...... +..+....+.. +++-+++...... ..
T Consensus 138 pDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~----------~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 138 RDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL----------KDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp TTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE----------EEEESCCCEEE-TTTEEEEEESSCCC-------CC
T ss_pred CCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc----------CCceeccEEEe-CCCEEEEEEecCcccccccccCC
Confidence 44555555433233334579999999998755432 11223344455 6654444443321 23
Q ss_pred CCcEEEEECCCCcE--EEeecCCCCCC--cCcccEEEEECCcE-EEEEecCCCCccCCceEEEeCCCC--ceEeecCCCC
Q 013179 101 LGDFWVLDTDIWQW--SELTSFGDLPS--PRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTISL--EWMQLPVTGS 173 (448)
Q Consensus 101 ~~~~~~~d~~t~~W--~~~~~~~~~p~--~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~ 173 (448)
...++++++.+.+= ..+.. .+. +..........+++ |++...... ..+++|.+|+.+. .|..+. .
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~---~~~~~~~~~~~~~~SpDg~~l~~~~~~~~--~~~~i~~~d~~~~~~~~~~l~---~ 278 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFG---AIPAQHHRYVGATVTEDDRFLLISAANST--SGNRLYVKDLSQENAPLLTVQ---G 278 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEES---CSGGGCCSEEEEEECTTSCEEEEEEESSS--SCCEEEEEETTSTTCCCEEEE---C
T ss_pred CcEEEEEECCCCcccceEEEe---cCCCCCeEEEEEEEcCCCCEEEEEEccCC--CCcEEEEEECCCCCCceEEEe---C
Confidence 45688888877653 22321 121 22223333444554 444332222 2368999998766 688775 2
Q ss_pred CCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCC---CceEEecCCCCCCCCCceeEEEEeCCEEEEE
Q 013179 174 VPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENET---PGWTQLKLPGQAPSSRCGHTITSGGHYLLLF 250 (448)
Q Consensus 174 ~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~---~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~ 250 (448)
...... ......+++||+....+.. ...++. .|+.+ ..|+.+... ... .. +....++.|++.
T Consensus 279 ~~~~~~-~~~~~~g~~l~~~t~~~~~---~~~l~~------~d~~~~~~~~~~~l~~~--~~~--~~-~~s~~g~~lv~~ 343 (693)
T 3iuj_A 279 DLDADV-SLVDNKGSTLYLLTNRDAP---NRRLVT------VDAANPGPAHWRDLIPE--RQQ--VL-TVHSGSGYLFAE 343 (693)
T ss_dssp SSSSCE-EEEEEETTEEEEEECTTCT---TCEEEE------EETTSCCGGGCEEEECC--CSS--CE-EEEEETTEEEEE
T ss_pred CCCceE-EEEeccCCEEEEEECCCCC---CCEEEE------EeCCCCCccccEEEecC--CCC--EE-EEEEECCEEEEE
Confidence 111111 1123347899988765432 122333 35544 358876521 111 12 555567777665
Q ss_pred cCCCCCCCcccccceeCcEEEEEcCCCceEEec
Q 013179 251 GGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLP 283 (448)
Q Consensus 251 GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 283 (448)
.-.+ -...++++|+.......+.
T Consensus 344 ~~~~----------g~~~l~~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 344 YMVD----------ATARVEQFDYEGKRVREVA 366 (693)
T ss_dssp EEET----------TEEEEEEECTTSCEEEEEC
T ss_pred EEEC----------CeeEEEEEECCCCeeEEee
Confidence 4322 1246889998876655553
No 97
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.67 E-value=1.2 Score=41.77 Aligned_cols=177 Identities=15% Similarity=0.023 Sum_probs=84.7
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECC-cEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
+++.++.|+.++ .+..+|+.+++-...-. .... ...+++...+ ..+++.|+.++ .+..||+.+.+
T Consensus 150 dg~~l~sgs~dg-----~v~iwd~~~~~~~~~~~---~h~~-~v~~v~~s~~~~~~~~s~~~dg-----~v~~wd~~~~~ 215 (357)
T 4g56_B 150 DGTQAVSGGKDF-----SVKVWDLSQKAVLKSYN---AHSS-EVNCVAACPGKDTIFLSCGEDG-----RILLWDTRKPK 215 (357)
T ss_dssp SSSEEEEEETTS-----CEEEEETTTTEEEEEEC---CCSS-CEEEEEECTTCSSCEEEEETTS-----CEEECCTTSSS
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEEEc---CCCC-CEEEEEEccCCCceeeeeccCC-----ceEEEECCCCc
Confidence 567777777554 48889998876544321 1111 1122222223 24677777544 37788887665
Q ss_pred eEeecCCCCCCCccCCc-eeEEe--CCEEEEEcccCCCCCccCceeeecccccccCCCCceE-EecCCCCCCCCCceeEE
Q 013179 165 WMQLPVTGSVPPPRCGH-TATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT-QLKLPGQAPSSRCGHTI 240 (448)
Q Consensus 165 W~~~~~~~~~p~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~-~~~~~g~~p~~r~~~~~ 240 (448)
-.... ......... +++.. ++.+++.|+.++. +..||+.+.+-. .+. .... .-.++
T Consensus 216 ~~~~~---~~~~~~~~v~~v~~sp~~~~~la~g~~d~~------------i~~wd~~~~~~~~~~~----~~~~-~v~~l 275 (357)
T 4g56_B 216 PATRI---DFCASDTIPTSVTWHPEKDDTFACGDETGN------------VSLVNIKNPDSAQTSA----VHSQ-NITGL 275 (357)
T ss_dssp CBCBC---CCTTCCSCEEEEEECTTSTTEEEEEESSSC------------EEEEESSCGGGCEEEC----CCSS-CEEEE
T ss_pred eeeee---eeccccccccchhhhhcccceEEEeecccc------------eeEEECCCCcEeEEEe----ccce-eEEEE
Confidence 33221 111111111 22222 3567777765432 233455543322 121 1111 11233
Q ss_pred EE--eCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEE--ECCEEEEEccCCCC
Q 013179 241 TS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTC--LGSLYLLFGGFDGK 313 (448)
Q Consensus 241 ~~--~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~ 313 (448)
+. .+..+++.|+.+ ..+.++|..+.+-...... .. .-.+++. .++++++.||.++.
T Consensus 276 ~~sp~~~~~lasgs~D------------~~i~iwd~~~~~~~~~~~H----~~-~V~~vafsP~d~~~l~s~s~Dg~ 335 (357)
T 4g56_B 276 AYSYHSSPFLASISED------------CTVAVLDADFSEVFRDLSH----RD-FVTGVAWSPLDHSKFTTVGWDHK 335 (357)
T ss_dssp EECSSSSCCEEEEETT------------SCEEEECTTSCEEEEECCC----SS-CEEEEEECSSSTTEEEEEETTSC
T ss_pred EEcCCCCCEEEEEeCC------------CEEEEEECCCCcEeEECCC----CC-CEEEEEEeCCCCCEEEEEcCCCe
Confidence 33 233566666543 2488889887754433211 11 1222332 25678888887754
No 98
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.60 E-value=0.89 Score=42.76 Aligned_cols=112 Identities=12% Similarity=0.113 Sum_probs=55.6
Q ss_pred EEEEEcCCCCCcccCceEEEEcCCCc------EEeeeecCCCCCCCCCC--CCCcceeEEE----ECCeE-EEEcccCCC
Q 013179 32 KVVVFGGLVDKRFLSDVVVYDIDNKL------WFQPECTGNGSNGQVGP--GPRAFHIAVA----IDCHM-FIFGGRFGS 98 (448)
Q Consensus 32 ~iyv~GG~~~~~~~~~~~~yd~~~~~------W~~~~~~~~~~~~~~~p--~~R~~h~~~~----~~~~l-yv~GG~~~~ 98 (448)
..++.|+.+ ..+.+||+.+++ +..+.... .. .......+.. -++.. ++.|+.++
T Consensus 82 ~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg- 148 (397)
T 1sq9_A 82 CLVATTSFS-----GDLLFYRITREDETKKVIFEKLDLLD-------SDMKKHSFWALKWGASNDRLLSHRLVATDVKG- 148 (397)
T ss_dssp EEEEEEETT-----SCEEEEEEEECTTTCCEEEEEECCSC-------TTGGGSCEEEEEEECCC----CEEEEEEETTS-
T ss_pred cEEEEEcCC-----CCEEEEEccCCcccccccceeecccc-------cccCCCcEEEEEEeeccCCCCceEEEEEeCCC-
Confidence 777888764 348888888776 66554210 00 1222223333 34555 77777543
Q ss_pred CCCCcEEEEECCC------Cc---EE---Eeec--CCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 99 RRLGDFWVLDTDI------WQ---WS---ELTS--FGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 99 ~~~~~~~~~d~~t------~~---W~---~~~~--~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
.+..||+.+ .+ |. .+.. .........-.+++...++ +++.|+.++ .+..||+.+.+
T Consensus 149 ----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg-----~i~i~d~~~~~ 218 (397)
T 1sq9_A 149 ----TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG-----TVQISELSTLR 218 (397)
T ss_dssp ----CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS-----EEEEEETTTTE
T ss_pred ----cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC-----cEEEEECCCCc
Confidence 467777665 22 11 1110 0000011222344444566 777776443 48889988765
Q ss_pred eE
Q 013179 165 WM 166 (448)
Q Consensus 165 W~ 166 (448)
-.
T Consensus 219 ~~ 220 (397)
T 1sq9_A 219 PL 220 (397)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 99
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.57 E-value=2.5 Score=38.17 Aligned_cols=109 Identities=8% Similarity=0.030 Sum_probs=55.2
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEE-E--CCeEEEEcccCCCCCCCcEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-I--DCHMFIFGGRFGSRRLGDFW 105 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~-~--~~~lyv~GG~~~~~~~~~~~ 105 (448)
.+++.++.|+.++ .+.+||+.......+.... ...... .++.. . ++.+++.|+.++ .+.
T Consensus 19 ~~g~~las~s~D~-----~v~iw~~~~~~~~~~~~l~-------gH~~~V-~~v~~s~~~~g~~l~s~s~D~-----~v~ 80 (297)
T 2pm7_B 19 YYGKRMATCSSDK-----TIKIFEVEGETHKLIDTLT-------GHEGPV-WRVDWAHPKFGTILASCSYDG-----KVM 80 (297)
T ss_dssp TTSSEEEEEETTS-----CEEEEEBCSSCBCCCEEEC-------CCSSCE-EEEEECCGGGCSEEEEEETTT-----EEE
T ss_pred CCCCEEEEEeCCC-----EEEEEecCCCCcEEEEEEc-------cccCCe-EEEEecCCCcCCEEEEEcCCC-----EEE
Confidence 4577888888653 4778888754333222211 111111 12221 1 256777777553 478
Q ss_pred EEECCCCcEEEeecCCCCCCcCcccEEEEE-CC--cEEEEEecCCCCccCCceEEEeCCCC
Q 013179 106 VLDTDIWQWSELTSFGDLPSPRDFAAASAI-GN--RKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 106 ~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~--~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
.+|+.+++|..+.. +......-.++.. .+ +.+++.|+.++ .+..||+.+.
T Consensus 81 iWd~~~~~~~~~~~---~~~h~~~v~~v~~~p~~~g~~l~s~s~d~-----~v~~wd~~~~ 133 (297)
T 2pm7_B 81 IWKEENGRWSQIAV---HAVHSASVNSVQWAPHEYGPMLLVASSDG-----KVSVVEFKEN 133 (297)
T ss_dssp EEEBSSSCBCCCEE---ECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEBCSS
T ss_pred EEEcCCCceEEEEE---eecCCCceeEEEeCcCCCCcEEEEEECCC-----cEEEEEecCC
Confidence 88988877755432 1111111122222 22 45666776543 3667776654
No 100
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=94.51 E-value=1 Score=47.06 Aligned_cols=214 Identities=10% Similarity=0.046 Sum_probs=107.1
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCC---------C
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS---------R 99 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~---------~ 99 (448)
.+++.++|+...++.....++++|+.+++....... ..+....+..-+ +-++++..... .
T Consensus 172 PDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~----------~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~ 240 (741)
T 1yr2_A 172 DDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELK----------WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALN 240 (741)
T ss_dssp TTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEE----------EEESCCCEESTT-SEEEEEECCCC--------CC
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCC----------CceeccEEEECC-CEEEEEEecCcccccccccCC
Confidence 456666666543333335799999999987554211 111111222224 44444433221 1
Q ss_pred CCCcEEEEECCCCcE--EEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCC--c-eEeecCCCCC
Q 013179 100 RLGDFWVLDTDIWQW--SELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL--E-WMQLPVTGSV 174 (448)
Q Consensus 100 ~~~~~~~~d~~t~~W--~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~--~-W~~~~~~~~~ 174 (448)
....++.+++.+.+- ..+.. ....+..........+++..++.........++++.+|+.+. . |+.+. ..
T Consensus 241 ~~~~v~~~~lgt~~~~~~lv~~--~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~---~~ 315 (741)
T 1yr2_A 241 YNQTVWLHRLGTPQSADQPVFA--TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI---PD 315 (741)
T ss_dssp CCCEEEEEETTSCGGGCEEEEC--CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE---CS
T ss_pred CCCEEEEEECCCCchhCEEEec--cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec---CC
Confidence 244688889877652 22221 111122233344445554444433332223568999999877 6 88875 21
Q ss_pred CCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCC--CceEEecCCCCCCCCCceeEEEEeCCEEEEEcC
Q 013179 175 PPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENET--PGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGG 252 (448)
Q Consensus 175 p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~--~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG 252 (448)
..... ......++.||+....... ...+ ..+|+++ ..|+.+... ... .-..+...++.+++...
T Consensus 316 ~~~~~-~~~~~dg~~l~~~s~~~~~---~~~l------~~~d~~~~~~~~~~l~~~--~~~--~l~~~~~~~~~lv~~~~ 381 (741)
T 1yr2_A 316 LKAQW-DFVDGVGDQLWFVSGDGAP---LKKI------VRVDLSGSTPRFDTVVPE--SKD--NLESVGIAGNRLFASYI 381 (741)
T ss_dssp SSSCE-EEEEEETTEEEEEECTTCT---TCEE------EEEECSSSSCEEEEEECC--CSS--EEEEEEEEBTEEEEEEE
T ss_pred CCceE-EEEeccCCEEEEEECCCCC---CCEE------EEEeCCCCccccEEEecC--CCC--eEEEEEEECCEEEEEEE
Confidence 11111 1122346778777544221 1223 3346666 578877521 111 11233445778777664
Q ss_pred CCCCCCcccccceeCcEEEEEcCCCceEEe
Q 013179 253 HGTGGWLSRYDIYYNDTIILDRLSAQWKRL 282 (448)
Q Consensus 253 ~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 282 (448)
.+. ...+|++|+....-..+
T Consensus 382 ~dg----------~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 382 HDA----------KSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp ETT----------EEEEEEEETTSCEEEEC
T ss_pred ECC----------EEEEEEEeCCCCceeec
Confidence 332 25688888765544444
No 101
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=94.49 E-value=3.7 Score=42.44 Aligned_cols=129 Identities=17% Similarity=0.059 Sum_probs=68.9
Q ss_pred EEEEECCcEEEEEcCC-CCCcccCceEEEEcCCCcEEeeeecCCCC-CCC------CCC--CCC------cceeEEEECC
Q 013179 24 SAVNIGKSKVVVFGGL-VDKRFLSDVVVYDIDNKLWFQPECTGNGS-NGQ------VGP--GPR------AFHIAVAIDC 87 (448)
Q Consensus 24 ~~~~~~~~~iyv~GG~-~~~~~~~~~~~yd~~~~~W~~~~~~~~~~-~~~------~~p--~~R------~~h~~~~~~~ 87 (448)
......+++.+++++. +++.....++.+|+.+++...+....... ++. ... ..| ....+..-++
T Consensus 41 ~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg 120 (741)
T 2ecf_A 41 KPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDA 120 (741)
T ss_dssp EEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTS
T ss_pred CceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCC
Confidence 3333455777777665 44334457999999999877665321100 000 000 000 1222233355
Q ss_pred eEEEEcccCCCCCCCcEEEEECCCC---cEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 88 HMFIFGGRFGSRRLGDFWVLDTDIW---QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 88 ~lyv~GG~~~~~~~~~~~~~d~~t~---~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
+.++++.. ..++.+|+.++ .-..+.. ........+...+++.++++.. +.++.+|+.+++
T Consensus 121 ~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~-----~~~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g~ 183 (741)
T 2ecf_A 121 QRLLFPLG------GELYLYDLKQEGKAAVRQLTH-----GEGFATDAKLSPKGGFVSFIRG------RNLWVIDLASGR 183 (741)
T ss_dssp SEEEEEET------TEEEEEESSSCSTTSCCBCCC-----SSSCEEEEEECTTSSEEEEEET------TEEEEEETTTTE
T ss_pred CEEEEEeC------CcEEEEECCCCCcceEEEccc-----CCcccccccCCCCCCEEEEEeC------CcEEEEecCCCC
Confidence 55555543 57999999887 5444331 1111223333355555555432 369999999988
Q ss_pred eEeec
Q 013179 165 WMQLP 169 (448)
Q Consensus 165 W~~~~ 169 (448)
...+.
T Consensus 184 ~~~~~ 188 (741)
T 2ecf_A 184 QMQLT 188 (741)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 77765
No 102
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.49 E-value=0.69 Score=43.45 Aligned_cols=111 Identities=10% Similarity=-0.024 Sum_probs=57.7
Q ss_pred CceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCe-EEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCC
Q 013179 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCH-MFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL 123 (448)
Q Consensus 46 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~-lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~ 123 (448)
..++.+|+.+++...+... .....+....- ++. |++............++.+|+.+..+..+.. ..
T Consensus 168 ~~l~~~d~~~g~~~~~~~~----------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~--~~ 235 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQD----------TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE--HA 235 (396)
T ss_dssp EEEEEEETTTCCEEEEEEE----------SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC--CC
T ss_pred ceEEEEECCCCcEEeeccC----------CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec--cC
Confidence 3689999999887766521 11223333333 344 4444321111122579999999888777652 11
Q ss_pred CCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeec
Q 013179 124 PSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLP 169 (448)
Q Consensus 124 p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~ 169 (448)
+ .......+...+++.+++...........++.+|+.+++.+.+.
T Consensus 236 ~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 280 (396)
T 3c5m_A 236 E-GESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM 280 (396)
T ss_dssp T-TEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE
T ss_pred C-CccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEee
Confidence 1 11111222334444333333222221234999999988877765
No 103
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.46 E-value=0.47 Score=45.87 Aligned_cols=109 Identities=15% Similarity=0.082 Sum_probs=60.7
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEE--ECCeEEEEcccCCCCCCCcEEEE
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA--IDCHMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~--~~~~lyv~GG~~~~~~~~~~~~~ 107 (448)
++.+++.|+.++ .+.++|+.++.-..+... ..+.... .+++. .++.+++.|+.++ .+.++
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~-------~gH~~~V-~~l~f~p~~~~~l~s~s~D~-----~v~iw 192 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKG-------IGAGGSI-TGLKFNPLNTNQFYASSMEG-----TTRLQ 192 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECC-------CSSSCCC-CEEEECSSCTTEEEEECSSS-----CEEEE
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEc-------cCCCCCE-EEEEEeCCCCCEEEEEeCCC-----EEEEe
Confidence 456888888654 388888887654332211 0111111 12222 2456677777553 47888
Q ss_pred ECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
|+.++....+..... ......++....++.+++.|+.++ .+..+|+...
T Consensus 193 d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~g~~dg-----~i~~wd~~~~ 241 (435)
T 4e54_B 193 DFKGNILRVFASSDT--INIWFCSLDVSASSRMVVTGDNVG-----NVILLNMDGK 241 (435)
T ss_dssp ETTSCEEEEEECCSS--CSCCCCCEEEETTTTEEEEECSSS-----BEEEEESSSC
T ss_pred eccCCceeEEeccCC--CCccEEEEEECCCCCEEEEEeCCC-----cEeeeccCcc
Confidence 998887666553111 112223344445667888887554 3778887654
No 104
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.44 E-value=5.5 Score=41.47 Aligned_cols=108 Identities=9% Similarity=-0.084 Sum_probs=56.6
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..++.|+.+ ..+.+||..+++....-. .........++.-++..++.|+.++ .+..||
T Consensus 65 ~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~vw~ 125 (814)
T 3mkq_A 65 ARKNWIIVGSDD-----FRIRVFNYNTGEKVVDFE---------AHPDYIRSIAVHPTKPYVLSGSDDL-----TVKLWN 125 (814)
T ss_dssp GGGTEEEEEETT-----SEEEEEETTTCCEEEEEE---------CCSSCEEEEEECSSSSEEEEEETTS-----EEEEEE
T ss_pred CCCCEEEEEeCC-----CeEEEEECCCCcEEEEEe---------cCCCCEEEEEEeCCCCEEEEEcCCC-----EEEEEE
Confidence 445667777653 358889998887543221 1111122222223555566666432 488889
Q ss_pred CCCC-cEEEeecCCCCCCcCcccEEEEEC-CcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 109 TDIW-QWSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 109 ~~t~-~W~~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
..++ ....... . ....-.+++... ++.+++.|+.++ .+..||+.+.+
T Consensus 126 ~~~~~~~~~~~~---~-~~~~v~~~~~~p~~~~~l~~~~~dg-----~v~vwd~~~~~ 174 (814)
T 3mkq_A 126 WENNWALEQTFE---G-HEHFVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQST 174 (814)
T ss_dssp GGGTSEEEEEEE---C-CSSCEEEEEEETTEEEEEEEEETTS-----EEEEEETTCSS
T ss_pred CCCCceEEEEEc---C-CCCcEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCc
Confidence 8776 3332221 1 111112233333 557777777554 47888876544
No 105
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.38 E-value=4 Score=42.06 Aligned_cols=209 Identities=11% Similarity=-0.017 Sum_probs=102.8
Q ss_pred ccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCC
Q 013179 44 FLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL 123 (448)
Q Consensus 44 ~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~ 123 (448)
....+|+.+...+.|+.+.....-+ ...........+.-+++.++|.-......-..++++|+.+++..... .+
T Consensus 92 ~~~~l~~~~~~~~~~~~l~d~~~~a---~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~---~~ 165 (695)
T 2bkl_A 92 EKAILYWRQGESGQEKVLLDPNGWS---KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD---VI 165 (695)
T ss_dssp SSCEEEEEESTTSCCEEEECGGGSS---SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC---CB
T ss_pred eEEEEEEEcCCCCCcEEEEchHHhc---cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc---cc
Confidence 3466888888888888775321100 00000111222233666666554433333457999999998863111 12
Q ss_pred CCcCcccEEEEECCcEEEEEecCCCC--------ccCCceEEEeCCCCceE--eecCCCCCCC-ccCCceeEEe-CCEEE
Q 013179 124 PSPRDFAAASAIGNRKIVMYGGWDGK--------KWLSDVYVLDTISLEWM--QLPVTGSVPP-PRCGHTATMV-EKRLL 191 (448)
Q Consensus 124 p~~r~~~~~~~~~~~~iyv~GG~~~~--------~~~~~v~~yd~~t~~W~--~~~~~~~~p~-~r~~~~~~~~-~~~ly 191 (448)
+.... ...+-..+++.++++..+.. .....++++++.+..-+ .+. ..+. +......... +++.+
T Consensus 166 ~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~---~~~~~~~~~~~~~~SpDG~~l 241 (695)
T 2bkl_A 166 EGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH---ERTGDPTTFLQSDLSRDGKYL 241 (695)
T ss_dssp SCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE---CCCCCTTCEEEEEECTTSCCE
T ss_pred Ccccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE---ecCCCCEEEEEEEECCCCCEE
Confidence 22221 23333456666666655432 23456999998877632 222 1111 1222222222 44444
Q ss_pred EEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCcccccceeCcEEE
Q 013179 192 IYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTII 271 (448)
Q Consensus 192 v~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~ 271 (448)
++...... ..+++|.+ |..+..+..+... ... . ...+..++.+|+....+. ....+++
T Consensus 242 ~~~~~~~~--~~~~l~~~------~~~~~~~~~l~~~---~~~-~-~~~~~~~g~l~~~s~~~~---------~~~~l~~ 299 (695)
T 2bkl_A 242 FVYILRGW--SENDVYWK------RPGEKDFRLLVKG---VGA-K-YEVHAWKDRFYVLTDEGA---------PRQRVFE 299 (695)
T ss_dssp EEEEEETT--TEEEEEEE------CTTCSSCEEEEEC---SSC-C-EEEEEETTEEEEEECTTC---------TTCEEEE
T ss_pred EEEEeCCC--CceEEEEE------cCCCCceEEeecC---CCc-e-EEEEecCCcEEEEECCCC---------CCCEEEE
Confidence 44433221 12334443 6667778877631 111 1 122224555666543221 1257899
Q ss_pred EEcCCCc---eEEecc
Q 013179 272 LDRLSAQ---WKRLPI 284 (448)
Q Consensus 272 yd~~~~~---W~~~~~ 284 (448)
+|+.+.. |..+-.
T Consensus 300 ~d~~~~~~~~~~~l~~ 315 (695)
T 2bkl_A 300 VDPAKPARASWKEIVP 315 (695)
T ss_dssp EBTTBCSGGGCEEEEC
T ss_pred EeCCCCCccCCeEEec
Confidence 9987654 887755
No 106
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=94.37 E-value=2.3 Score=39.20 Aligned_cols=97 Identities=9% Similarity=-0.046 Sum_probs=51.1
Q ss_pred ceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCc
Q 013179 47 DVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSP 126 (448)
Q Consensus 47 ~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~ 126 (448)
.+|.+|..++++..+..... . ..-...++.-+++||+.+... ....+++||+.+++++.+... ....
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~------~--~~p~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~--~~~~ 85 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAA------T--QNPTYLALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTV--VAPG 85 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEE------C--SCCCCEEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEEEEE--EEES
T ss_pred EEEEEcCCCCeEEEeeeeec------c--CCcceEEEccCCeEEEEEecC---CCceEEEEEecCCcEEEeeee--ecCC
Confidence 47888888888877543211 1 111122223366777775431 124589999988887776531 0011
Q ss_pred CcccEEEEECCc-EEEEEecCCCCccCCceEEEeCC
Q 013179 127 RDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTI 161 (448)
Q Consensus 127 r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~ 161 (448)
..-..++...++ .||+.+..+ ..+..||+.
T Consensus 86 ~~p~~~a~spdg~~l~~~~~~~-----~~v~v~~~~ 116 (347)
T 3hfq_A 86 TPPAYVAVDEARQLVYSANYHK-----GTAEVMKIA 116 (347)
T ss_dssp CCCSEEEEETTTTEEEEEETTT-----TEEEEEEEC
T ss_pred CCCEEEEECCCCCEEEEEeCCC-----CEEEEEEeC
Confidence 112233444444 566654221 346777764
No 107
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=94.23 E-value=3.3 Score=38.06 Aligned_cols=124 Identities=12% Similarity=0.055 Sum_probs=62.3
Q ss_pred EEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECC-eEEEEcccCCCCCCCc
Q 013179 25 AVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDC-HMFIFGGRFGSRRLGD 103 (448)
Q Consensus 25 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~-~lyv~GG~~~~~~~~~ 103 (448)
+++..++++|+.+... ....+++||+.+++++.+..... ...+-.+.++.-++ .||+.+... ..
T Consensus 45 ~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~-------~~~~p~~~a~spdg~~l~~~~~~~-----~~ 109 (347)
T 3hfq_A 45 LALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVVA-------PGTPPAYVAVDEARQLVYSANYHK-----GT 109 (347)
T ss_dssp EEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEEE-------ESCCCSEEEEETTTTEEEEEETTT-----TE
T ss_pred EEEccCCeEEEEEecC---CCceEEEEEecCCcEEEeeeeec-------CCCCCEEEEECCCCCEEEEEeCCC-----CE
Confidence 3334456766665321 12468999998888777654210 11122233333344 466664321 34
Q ss_pred EEEEECC-CCcEEEeec---CCCCCCcC----cccEEEEECCcEEEEEecCCCCccCCceEEEeCC-CCceEee
Q 013179 104 FWVLDTD-IWQWSELTS---FGDLPSPR----DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI-SLEWMQL 168 (448)
Q Consensus 104 ~~~~d~~-t~~W~~~~~---~~~~p~~r----~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~-t~~W~~~ 168 (448)
+.+||+. +++...+.. .+..|..| .-+.++...++++|+.+..+ +.+..||+. +.+...+
T Consensus 110 v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~-----~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 110 AEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS-----DKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-----TEEEEEEECTTSCEEEE
T ss_pred EEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-----CEEEEEEECCCCcEEEe
Confidence 7777774 334443332 12222222 12334444566777654322 358888887 5555543
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=94.16 E-value=3.9 Score=39.34 Aligned_cols=113 Identities=13% Similarity=0.178 Sum_probs=55.5
Q ss_pred CCcEE-EEEcCCCCCcccCceEEEEcC--CCcEEe-eeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcE
Q 013179 29 GKSKV-VVFGGLVDKRFLSDVVVYDID--NKLWFQ-PECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDF 104 (448)
Q Consensus 29 ~~~~i-yv~GG~~~~~~~~~~~~yd~~--~~~W~~-~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~ 104 (448)
.++.. ++.|+.+ ..+.+||+. ++.... +.... ...+....+..-+++.++.|+.. ..+
T Consensus 112 ~d~~~l~~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~--------~~~~v~~~~~sp~~~~l~~~~~~-----g~v 173 (450)
T 2vdu_B 112 SDESRLIACADSD-----KSLLVFDVDKTSKNVLKLRKRFC--------FSKRPNAISIAEDDTTVIIADKF-----GDV 173 (450)
T ss_dssp TTSSEEEEEEGGG-----TEEEEEEECSSSSSCEEEEEEEE--------CSSCEEEEEECTTSSEEEEEETT-----SEE
T ss_pred CCCCEEEEEECCC-----CeEEEEECcCCCCceeeeeeccc--------CCCCceEEEEcCCCCEEEEEeCC-----CcE
Confidence 34444 5777754 347888887 554322 21100 11111222222256666777643 347
Q ss_pred EEEECCCCcEEE-eecCCCCCCc-CcccEEEEECC---cEEEEEecCCCCccCCceEEEeCCCCceE
Q 013179 105 WVLDTDIWQWSE-LTSFGDLPSP-RDFAAASAIGN---RKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (448)
Q Consensus 105 ~~~d~~t~~W~~-~~~~~~~p~~-r~~~~~~~~~~---~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (448)
+.+++.+..... ... .+... ..-.+++...+ +.+++.|+.++ .+..||+.+.+..
T Consensus 174 ~~~~~~~~~~~~~~~~--~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~-----~i~vwd~~~~~~~ 233 (450)
T 2vdu_B 174 YSIDINSIPEEKFTQE--PILGHVSMLTDVHLIKDSDGHQFIITSDRDE-----HIKISHYPQCFIV 233 (450)
T ss_dssp EEEETTSCCCSSCCCC--CSEECSSCEEEEEEEECTTSCEEEEEEETTS-----CEEEEEESCTTCE
T ss_pred EEEecCCcccccccce--eeecccCceEEEEEcCCCCCCcEEEEEcCCC-----cEEEEECCCCcee
Confidence 888887654321 000 01101 11122333345 67888887653 4788888776544
No 109
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.12 E-value=4.3 Score=39.00 Aligned_cols=105 Identities=16% Similarity=0.104 Sum_probs=55.1
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECC
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTD 110 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~ 110 (448)
+.+++.|+.++ .+.+||..+++-... . ..... .-.++....+.+++.|+.++ .+..+|+.
T Consensus 132 ~~~l~sgs~dg-----~i~vwd~~~~~~~~~--~-------~~h~~-~V~~l~~~~~~~l~s~s~dg-----~i~vwd~~ 191 (464)
T 3v7d_B 132 DNYVITGADDK-----MIRVYDSINKKFLLQ--L-------SGHDG-GVWALKYAHGGILVSGSTDR-----TVRVWDIK 191 (464)
T ss_dssp TTEEEEEETTS-----CEEEEETTTTEEEEE--E-------CCCSS-CEEEEEECSTTEEEEEETTS-----CEEEEETT
T ss_pred CCEEEEEcCCC-----cEEEEECCCCcEEEE--E-------eCCCc-CEEEEEEcCCCEEEEEeCCC-----CEEEEECC
Confidence 34667776543 488899988763221 1 01111 11222223344667776553 48899998
Q ss_pred CCcEEEeecCCCCCCcCcccEEEEE--CCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 111 IWQWSELTSFGDLPSPRDFAAASAI--GNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 111 t~~W~~~~~~~~~p~~r~~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
+++-...-. ....+ -.++... .++..++.|+.++ .+..||+.+..
T Consensus 192 ~~~~~~~~~--~h~~~--v~~l~~~~~~~~~~l~s~s~d~-----~i~vwd~~~~~ 238 (464)
T 3v7d_B 192 KGCCTHVFE--GHNST--VRCLDIVEYKNIKYIVTGSRDN-----TLHVWKLPKES 238 (464)
T ss_dssp TTEEEEEEC--CCSSC--EEEEEEEESSSCEEEEEEETTS-----CEEEEECCCCC
T ss_pred CCcEEEEEC--CCCCc--cEEEEEecCCCCCEEEEEcCCC-----cEEEeeCCCCc
Confidence 886443321 11111 1222222 4557777777654 36777776554
No 110
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.11 E-value=3.4 Score=41.27 Aligned_cols=232 Identities=11% Similarity=0.011 Sum_probs=102.0
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcCCC------cEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCc
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDIDNK------LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGD 103 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~~~------~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~ 103 (448)
++..++.|+.++ .+.+||+.++ ....+.... .........+..-+++.++.++.... ....
T Consensus 77 ~~~~l~s~~~dg-----~v~vw~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~~~~~-~~~~ 143 (615)
T 1pgu_A 77 GSQYLCSGDESG-----KVIVWGWTFDKESNSVEVNVKSEFQ-------VLAGPISDISWDFEGRRLCVVGEGRD-NFGV 143 (615)
T ss_dssp TCCEEEEEETTS-----EEEEEEEEEEGGGTEEEEEEEEEEE-------CCSSCEEEEEECTTSSEEEEEECCSS-CSEE
T ss_pred CCCEEEEecCCC-----EEEEEeCCCCcccccccccccchhh-------cccccEEEEEEeCCCCEEEEeccCCC-CccE
Confidence 677788887643 4777887654 333332211 11112222222235566666664322 1334
Q ss_pred EEEEECCCCcEEEeecCCCCCCcC-cccEEEEECCcE-EEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCcc-CC
Q 013179 104 FWVLDTDIWQWSELTSFGDLPSPR-DFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPR-CG 180 (448)
Q Consensus 104 ~~~~d~~t~~W~~~~~~~~~p~~r-~~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r-~~ 180 (448)
++.+|. .+-... +.... .-.+++...++. +++.|+.++ .+..||..+.+-...- . ...... .-
T Consensus 144 v~~~d~--~~~~~~-----~~~~~~~v~~~~~~~~~~~~l~~~~~d~-----~v~vwd~~~~~~~~~~-~-~~~~~~~~v 209 (615)
T 1pgu_A 144 FISWDS--GNSLGE-----VSGHSQRINACHLKQSRPMRSMTVGDDG-----SVVFYQGPPFKFSASD-R-THHKQGSFV 209 (615)
T ss_dssp EEETTT--CCEEEE-----CCSCSSCEEEEEECSSSSCEEEEEETTT-----EEEEEETTTBEEEEEE-C-SSSCTTCCE
T ss_pred EEEEEC--CCccee-----eecCCccEEEEEECCCCCcEEEEEeCCC-----cEEEEeCCCcceeeee-c-ccCCCCceE
Confidence 666663 222111 11111 122233334443 677776543 4788887766543321 0 111100 11
Q ss_pred ceeEEe-C-CEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCC
Q 013179 181 HTATMV-E-KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGW 258 (448)
Q Consensus 181 ~~~~~~-~-~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~ 258 (448)
.++... + +..++.|+.++ .+..||+.+.+....-..........-.++...++..++.++.+
T Consensus 210 ~~~~~~~~~~~~l~~~~~dg------------~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d---- 273 (615)
T 1pgu_A 210 RDVEFSPDSGEFVITVGSDR------------KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGAD---- 273 (615)
T ss_dssp EEEEECSTTCCEEEEEETTC------------CEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETT----
T ss_pred EEEEECCCCCCEEEEEeCCC------------eEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCC----
Confidence 222333 4 56777776543 23445666655433210000011111122333366666766643
Q ss_pred cccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEccCCC
Q 013179 259 LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (448)
Q Consensus 259 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 312 (448)
..+.+||+.+.+-...-.....+......++...++..++.|+.++
T Consensus 274 --------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 319 (615)
T 1pgu_A 274 --------ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDG 319 (615)
T ss_dssp --------SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTS
T ss_pred --------CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCC
Confidence 3588889887654433222111111122222222555666666654
No 111
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.07 E-value=3.5 Score=37.66 Aligned_cols=127 Identities=8% Similarity=-0.025 Sum_probs=71.5
Q ss_pred EEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCCC
Q 013179 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLG 102 (448)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~~ 102 (448)
..+...++.+|+.+..+ ..+++||+.+++...+... + ...-++++.. ++++|+...... ....
T Consensus 49 ~~~~~~~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~---------~-~~~~~~i~~~~dg~l~v~~~~~~-~~~~ 112 (333)
T 2dg1_A 49 GLNFDRQGQLFLLDVFE-----GNIFKINPETKEIKRPFVS---------H-KANPAAIKIHKDGRLFVCYLGDF-KSTG 112 (333)
T ss_dssp EEEECTTSCEEEEETTT-----CEEEEECTTTCCEEEEEEC---------S-SSSEEEEEECTTSCEEEEECTTS-SSCC
T ss_pred CcEECCCCCEEEEECCC-----CEEEEEeCCCCcEEEEeeC---------C-CCCcceEEECCCCcEEEEeCCCC-CCCc
Confidence 33334567788776532 3589999999887765421 1 1122333333 567887753221 1124
Q ss_pred cEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCC-CCccCCceEEEeCCCCceEee
Q 013179 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWD-GKKWLSDVYVLDTISLEWMQL 168 (448)
Q Consensus 103 ~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~-~~~~~~~v~~yd~~t~~W~~~ 168 (448)
.+++||+.+.....+.. .......-..++...++.+|+..... .......++++|+.+.+...+
T Consensus 113 ~i~~~d~~~~~~~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIE--DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EEEEECTTSCSCEEEEC--SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred eEEEEeCCCCEEEEEEc--cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 69999999887664332 11112222334444567888765321 111234699999887776655
No 112
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.06 E-value=1.7 Score=40.66 Aligned_cols=115 Identities=14% Similarity=0.053 Sum_probs=63.5
Q ss_pred CCc-EEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE--CCeEEEEcccCCCCCCCcEE
Q 013179 29 GKS-KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFW 105 (448)
Q Consensus 29 ~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv~GG~~~~~~~~~~~ 105 (448)
.++ .+++.|+.++ .+.+||+.+.+....-... .... .-.+++.. ++.+++.|+.++ .+.
T Consensus 83 ~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~-------~h~~-~v~~~~~~~~~~~~l~s~~~d~-----~i~ 144 (383)
T 3ei3_B 83 PTHPTTVAVGSKGG-----DIILWDYDVQNKTSFIQGM-------GPGD-AITGMKFNQFNTNQLFVSSIRG-----ATT 144 (383)
T ss_dssp SSCTTEEEEEEBTS-----CEEEEETTSTTCEEEECCC-------STTC-BEEEEEEETTEEEEEEEEETTT-----EEE
T ss_pred CCCCCEEEEEcCCC-----eEEEEeCCCcccceeeecC-------CcCC-ceeEEEeCCCCCCEEEEEeCCC-----EEE
Confidence 444 6788887643 4889999988765543210 0111 11222222 346677776543 488
Q ss_pred EEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEee
Q 013179 106 VLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQL 168 (448)
Q Consensus 106 ~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~ 168 (448)
.+|+.+.....+... ........+++...++..++.|+.++ .+..||+....-..+
T Consensus 145 iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~ 200 (383)
T 3ei3_B 145 LRDFSGSVIQVFAKT--DSWDYWYCCVDVSVSRQMLATGDSTG-----RLLLLGLDGHEIFKE 200 (383)
T ss_dssp EEETTSCEEEEEECC--CCSSCCEEEEEEETTTTEEEEEETTS-----EEEEEETTSCEEEEE
T ss_pred EEECCCCceEEEecc--CCCCCCeEEEEECCCCCEEEEECCCC-----CEEEEECCCCEEEEe
Confidence 899988777666531 11111223333445556777776543 478888854444433
No 113
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.05 E-value=3.6 Score=37.88 Aligned_cols=222 Identities=13% Similarity=0.020 Sum_probs=102.0
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCc--EEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKL--WFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWV 106 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~ 106 (448)
.++..++.||.+ ..+.+||+.+.. ....... .............-++. ++.|+.+ ..+..
T Consensus 107 ~~~~~l~s~~~d-----~~v~iw~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~-l~s~s~d-----~~i~~ 168 (340)
T 1got_B 107 PSGNYVACGGLD-----NICSIYNLKTREGNVRVSREL-------AGHTGYLSCCRFLDDNQ-IVTSSGD-----TTCAL 168 (340)
T ss_dssp TTSSEEEEEETT-----CEEEEEETTTCSBSCEEEEEE-------ECCSSCEEEEEEEETTE-EEEEETT-----SCEEE
T ss_pred CCCCEEEEEeCC-----CeEEEEECccCCCcceeEEEe-------cCCCccEEEEEECCCCc-EEEEECC-----CcEEE
Confidence 345566666654 347778877642 1111110 01111222222333555 4555543 24888
Q ss_pred EECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe
Q 013179 107 LDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV 186 (448)
Q Consensus 107 ~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~ 186 (448)
+|+.+.+-...-. ... ....+++...++.+++.|+.++ .+..||+.+..-...- ..... .-.+++..
T Consensus 169 wd~~~~~~~~~~~---~h~-~~v~~~~~~~~~~~l~sg~~d~-----~v~~wd~~~~~~~~~~---~~h~~-~v~~v~~~ 235 (340)
T 1got_B 169 WDIETGQQTTTFT---GHT-GDVMSLSLAPDTRLFVSGACDA-----SAKLWDVREGMCRQTF---TGHES-DINAICFF 235 (340)
T ss_dssp EETTTTEEEEEEC---CCS-SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCSEEEEE---CCCSS-CEEEEEEC
T ss_pred EECCCCcEEEEEc---CCC-CceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCeeEEEE---cCCcC-CEEEEEEc
Confidence 9998876543321 111 1122333345667888887654 3788888776533221 10111 11122222
Q ss_pred -CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCc-eeEEEE-eCCEEEEEcCCCCCCCccccc
Q 013179 187 -EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRC-GHTITS-GGHYLLLFGGHGTGGWLSRYD 263 (448)
Q Consensus 187 -~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~-~~~~~~-~~~~i~v~GG~~~~~~~~~~~ 263 (448)
++..++.|+.++. +..||+.+.+-...- ..+.... -.+++. .++.+++.|+.+
T Consensus 236 p~~~~l~s~s~d~~------------v~iwd~~~~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~~g~~d--------- 291 (340)
T 1got_B 236 PNGNAFATGSDDAT------------CRLFDLRADQELMTY---SHDNIICGITSVSFSKSGRLLLAGYDD--------- 291 (340)
T ss_dssp TTSSEEEEEETTSC------------EEEEETTTTEEEEEE---CCTTCCSCEEEEEECTTSSEEEEEETT---------
T ss_pred CCCCEEEEEcCCCc------------EEEEECCCCcEEEEE---ccCCcccceEEEEECCCCCEEEEECCC---------
Confidence 5667777775432 334566554322211 1111111 112333 345677777643
Q ss_pred ceeCcEEEEEcCCCceEE-eccCCCCCCCccceEEEEECCEEEEEccCCC
Q 013179 264 IYYNDTIILDRLSAQWKR-LPIGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (448)
Q Consensus 264 ~~~~~v~~yd~~~~~W~~-~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 312 (448)
..+.+||..+..-.. +... .......+..-+++.++.|+.++
T Consensus 292 ---~~i~vwd~~~~~~~~~~~~h----~~~v~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 292 ---FNCNVWDALKADRAGVLAGH----DNRVSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp ---SEEEEEETTTCCEEEEEECC----SSCEEEEEECTTSSCEEEEETTS
T ss_pred ---CeEEEEEcccCcEeeEeecC----CCcEEEEEEcCCCCEEEEEcCCc
Confidence 358888876654222 2111 11111112222466777777665
No 114
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.02 E-value=3.6 Score=37.73 Aligned_cols=71 Identities=13% Similarity=0.187 Sum_probs=38.4
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCC--CcEEEeecCCCCCCcCcc-cEEEEECCcEEEEEecCCCCccCCceEEEeCCC
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDI--WQWSELTSFGDLPSPRDF-AAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t--~~W~~~~~~~~~p~~r~~-~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t 162 (448)
+++.++.|+.++ .+..+|+.. ..+..+.. +...... .+++...++.+++.|+.++ .+..+|..+
T Consensus 118 ~g~~las~s~D~-----~v~iwd~~~~~~~~~~~~~---~~~h~~~v~~v~~~p~~~~l~s~s~D~-----~i~iW~~~~ 184 (330)
T 2hes_X 118 DGYYLATCSRDK-----SVWIWETDESGEEYECISV---LQEHSQDVKHVIWHPSEALLASSSYDD-----TVRIWKDYD 184 (330)
T ss_dssp TSCEEEEEETTS-----CEEEEECCTTCCCCEEEEE---ECCCSSCEEEEEECSSSSEEEEEETTS-----CEEEEEEET
T ss_pred CCCEEEEEeCCC-----EEEEEeccCCCCCeEEEEE---eccCCCceEEEEECCCCCEEEEEcCCC-----eEEEEECCC
Confidence 566777777553 477888742 33444332 1111111 1222224556777777654 367777777
Q ss_pred CceEeec
Q 013179 163 LEWMQLP 169 (448)
Q Consensus 163 ~~W~~~~ 169 (448)
..|+.+.
T Consensus 185 ~~~~~~~ 191 (330)
T 2hes_X 185 DDWECVA 191 (330)
T ss_dssp TEEEEEE
T ss_pred CCeeEEE
Confidence 7776554
No 115
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.00 E-value=2.6 Score=43.37 Aligned_cols=157 Identities=12% Similarity=-0.023 Sum_probs=77.1
Q ss_pred CcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCC-ceEeecCCCCCCCcc-C
Q 013179 102 GDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL-EWMQLPVTGSVPPPR-C 179 (448)
Q Consensus 102 ~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~-~W~~~~~~~~~p~~r-~ 179 (448)
..++++|+.+++-..+.. ...........+...+++.++++..+.......++.+|+.+. ....+..... .... .
T Consensus 235 ~~l~~~d~~~~~~~~~~~--~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~-~~~~~~ 311 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQT--GEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD-KHYVEP 311 (706)
T ss_dssp EEEEEEETTTTEEEECCC--CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC-SSCCCC
T ss_pred eEEEEEECCCCceEeecc--CCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC-CCeECc
Confidence 469999999988666542 011111112223334555444444443333457999999988 6766541111 0000 0
Q ss_pred CceeEEe---CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE--eCCEEEEEcCCC
Q 013179 180 GHTATMV---EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHG 254 (448)
Q Consensus 180 ~~~~~~~---~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~--~~~~i~v~GG~~ 254 (448)
...+... ++++++.+..++ .. .++.+|........+.. ....... .... .++.||+.+...
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~~g----~~------~l~~~~~~~~~~~~l~~---~~~~v~~-~~~~spdg~~l~~~~~~~ 377 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRRDG----WN------HLYLYDTTGRLIRQVTK---GEWEVTN-FAGFDPKGTRLYFESTEA 377 (706)
T ss_dssp CSCCEECTTCSSEEEEEECTTS----SC------EEEEEETTSCEEEECCC---SSSCEEE-EEEECTTSSEEEEEESSS
T ss_pred cCCceeecCCCCEEEEEEccCC----cc------EEEEEECCCCEEEecCC---CCeEEEe-eeEEcCCCCEEEEEecCC
Confidence 1122332 567555554332 12 23334656666666541 1111111 1222 234666665432
Q ss_pred CCCCcccccceeCcEEEEEcCCCceEEec
Q 013179 255 TGGWLSRYDIYYNDTIILDRLSAQWKRLP 283 (448)
Q Consensus 255 ~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 283 (448)
.. ....+|.+|+.+.....+.
T Consensus 378 ~~--------~~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 378 SP--------LERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp CT--------TCBEEEEEETTCCCCEESC
T ss_pred CC--------ceEEEEEEEcCCCCceecc
Confidence 21 1247999999887776665
No 116
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=93.96 E-value=3.5 Score=42.63 Aligned_cols=212 Identities=13% Similarity=0.021 Sum_probs=102.4
Q ss_pred ccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCC
Q 013179 44 FLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL 123 (448)
Q Consensus 44 ~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~ 123 (448)
....+|+.+...+.|+.+-....-+ ...........+.-+++.++++...+......++++|+.+++......
T Consensus 96 ~~~~l~~~~~~~~~~~~lld~~~l~---~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~---- 168 (710)
T 2xdw_A 96 NQRVLYVQDSLEGEARVFLDPNILS---DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL---- 168 (710)
T ss_dssp SSCEEEEESSTTSCCEEEECGGGGC---TTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE----
T ss_pred eEEEEEEEcCCCCCcEEEECHHHhc---cCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc----
Confidence 3456788887777776553210000 000001112222335666666544333333479999999999876532
Q ss_pred CCcCcccEEEEECCcEEEEEecCCCC-----------ccCCceEEEeCCCCceE--eecCCCCCCCccCCceeEEe-CCE
Q 013179 124 PSPRDFAAASAIGNRKIVMYGGWDGK-----------KWLSDVYVLDTISLEWM--QLPVTGSVPPPRCGHTATMV-EKR 189 (448)
Q Consensus 124 p~~r~~~~~~~~~~~~iyv~GG~~~~-----------~~~~~v~~yd~~t~~W~--~~~~~~~~p~~r~~~~~~~~-~~~ 189 (448)
+... ....+-..|++.++++..+.. .....++++++.+.+.+ .+- . ....+......... +++
T Consensus 169 ~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~-~-~~~~~~~~~~~~~SpDg~ 245 (710)
T 2xdw_A 169 ERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCA-E-FPDEPKWMGGAELSDDGR 245 (710)
T ss_dssp EEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEE-C-CTTCTTCEEEEEECTTSC
T ss_pred cCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEe-c-cCCCCeEEEEEEEcCCCC
Confidence 1111 122333345544444443332 23456999999887643 221 1 11112222222222 444
Q ss_pred EEEEcccCCCCCccCceeeecccccccCCC------C--ceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCccc
Q 013179 190 LLIYGGRGGGGPIMGDLWALKGLIEEENET------P--GWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSR 261 (448)
Q Consensus 190 lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~------~--~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~ 261 (448)
.+++....... ..+++|.+ |..+ . .+..+... ... ........++.||+.+..+.
T Consensus 246 ~l~~~~~~~~~-~~~~l~~~------d~~~~~~~~~~~~~~~~l~~~---~~~-~~~~~s~dg~~l~~~s~~~~------ 308 (710)
T 2xdw_A 246 YVLLSIREGCD-PVNRLWYC------DLQQESNGITGILKWVKLIDN---FEG-EYDYVTNEGTVFTFKTNRHS------ 308 (710)
T ss_dssp EEEEEEECSSS-SCCEEEEE------EGGGSSSSSCSSCCCEEEECS---SSS-CEEEEEEETTEEEEEECTTC------
T ss_pred EEEEEEEccCC-CccEEEEE------ECcccccccCCccceEEeeCC---CCc-EEEEEeccCCEEEEEECCCC------
Confidence 44443322111 12344444 6554 3 57777521 111 12223346778888875432
Q ss_pred ccceeCcEEEEEcCCC---ceEEeccC
Q 013179 262 YDIYYNDTIILDRLSA---QWKRLPIG 285 (448)
Q Consensus 262 ~~~~~~~v~~yd~~~~---~W~~~~~~ 285 (448)
....++++|+.+. .|+.+...
T Consensus 309 ---~~~~l~~~d~~~~~~~~~~~l~~~ 332 (710)
T 2xdw_A 309 ---PNYRLINIDFTDPEESKWKVLVPE 332 (710)
T ss_dssp ---TTCEEEEEETTSCCGGGCEEEECC
T ss_pred ---CCCEEEEEeCCCCCcccceeccCC
Confidence 1257999998775 58877553
No 117
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=93.92 E-value=4.2 Score=38.16 Aligned_cols=229 Identities=9% Similarity=0.026 Sum_probs=104.8
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCC--cEEeeeecCCCCCCCCCCCCCcceeEEEEC-CeEEEEcccCCCCCCCcEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAID-CHMFIFGGRFGSRRLGDFW 105 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~-~~lyv~GG~~~~~~~~~~~ 105 (448)
.++.+++.|+.+ ..+.+||+.+. ....+.... .........+..-+ +.+++.|+.++ .+.
T Consensus 77 ~~~~~l~~~~~d-----g~v~vw~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~l~s~~~dg-----~v~ 139 (416)
T 2pm9_A 77 HNNKIIAGALDN-----GSLELYSTNEANNAINSMARFS-------NHSSSVKTVKFNAKQDNVLASGGNNG-----EIF 139 (416)
T ss_dssp SSSSCEEEEESS-----SCEEEECCSSTTSCCCEEEECC-------CSSSCCCEEEECSSSTTBEEEECSSS-----CEE
T ss_pred CCCCeEEEEccC-----CeEEEeecccccccccchhhcc-------CCccceEEEEEcCCCCCEEEEEcCCC-----eEE
Confidence 456677777654 34788888771 111121110 11111122222222 56777776543 478
Q ss_pred EEECCCCc------EEEeecCCCCC-CcCcccEEEEECC-cEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCC-
Q 013179 106 VLDTDIWQ------WSELTSFGDLP-SPRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPP- 176 (448)
Q Consensus 106 ~~d~~t~~------W~~~~~~~~~p-~~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~- 176 (448)
.+|+.+.+ -..... ... ....-.+++...+ +.+++.|+.++ .+..||+.+.+-...- ..+.
T Consensus 140 iwd~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~---~~~~~ 209 (416)
T 2pm9_A 140 IWDMNKCTESPSNYTPLTPG--QSMSSVDEVISLAWNQSLAHVFASAGSSN-----FASIWDLKAKKEVIHL---SYTSP 209 (416)
T ss_dssp BCBTTTTSSCTTTCCCBCCC--CSCCSSCCCCEEEECSSCTTEEEEESSSS-----CEEEEETTTTEEEEEE---CCCCC
T ss_pred EEECCCCccccccccccccc--cccCCCCCeeEEEeCCCCCcEEEEEcCCC-----CEEEEECCCCCcceEE---ecccc
Confidence 88887764 111100 011 1112223333333 46777776543 4889999887654432 2221
Q ss_pred ----ccCCceeEEeC--CEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEe--CCEEE
Q 013179 177 ----PRCGHTATMVE--KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG--GHYLL 248 (448)
Q Consensus 177 ----~r~~~~~~~~~--~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~--~~~i~ 248 (448)
...-.++.... ..+++.|+.++.. ..+..||+.+..-..... .......-.+++.. ++.++
T Consensus 210 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~---------~~i~~~d~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~~l 278 (416)
T 2pm9_A 210 NSGIKQQLSVVEWHPKNSTRVATATGSDND---------PSILIWDLRNANTPLQTL--NQGHQKGILSLDWCHQDEHLL 278 (416)
T ss_dssp SSCCCCCEEEEEECSSCTTEEEEEECCSSS---------CCCCEEETTSTTSCSBCC--CSCCSSCEEEEEECSSCSSCE
T ss_pred ccccCCceEEEEECCCCCCEEEEEECCCCC---------ceEEEEeCCCCCCCcEEe--ecCccCceeEEEeCCCCCCeE
Confidence 11112223332 3577777654311 134455665532111110 00111112233332 56777
Q ss_pred EEcCCCCCCCcccccceeCcEEEEEcCCCceEE-eccCCCCCCCccceEEEEE-CC-EEEEEccCCC
Q 013179 249 LFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR-LPIGNEPPPARAYHSMTCL-GS-LYLLFGGFDG 312 (448)
Q Consensus 249 v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~-~~~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~ 312 (448)
+.|+.+ ..+.+||+.+.+-.. +.... .. ..++... ++ ++++.|+.++
T Consensus 279 ~s~~~d------------g~v~~wd~~~~~~~~~~~~~~----~~-v~~~~~s~~~~~~l~s~~~d~ 328 (416)
T 2pm9_A 279 LSSGRD------------NTVLLWNPESAEQLSQFPARG----NW-CFKTKFAPEAPDLFACASFDN 328 (416)
T ss_dssp EEEESS------------SEEEEECSSSCCEEEEEECSS----SC-CCCEEECTTCTTEEEECCSSS
T ss_pred EEEeCC------------CCEEEeeCCCCccceeecCCC----Cc-eEEEEECCCCCCEEEEEecCC
Confidence 777653 358888987765332 22211 11 1222222 33 6888887664
No 118
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.77 E-value=3.8 Score=37.17 Aligned_cols=196 Identities=10% Similarity=0.038 Sum_probs=92.5
Q ss_pred CCc-EEEEEcCCCCCcccCceEEEEcCCCcE-EeeeecCCCCCCCCCCCCCcce-eEEEE-CCeEEEEcccCCCCCCCcE
Q 013179 29 GKS-KVVVFGGLVDKRFLSDVVVYDIDNKLW-FQPECTGNGSNGQVGPGPRAFH-IAVAI-DCHMFIFGGRFGSRRLGDF 104 (448)
Q Consensus 29 ~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~~~~~~~~~~p~~R~~h-~~~~~-~~~lyv~GG~~~~~~~~~~ 104 (448)
.++ .+|+.+..+ ..++++|+.+++- ...... ...+ .+ .++.- +..|| .+...+ ....+
T Consensus 49 ~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~--------~~~~--~~~~~~s~dg~~l~-~~~~~~--~~~~i 110 (331)
T 3u4y_A 49 SDCSNVVVTSDFC-----QTLVQIETQLEPPKVVAIQE--------GQSS--MADVDITPDDQFAV-TVTGLN--HPFNM 110 (331)
T ss_dssp SSSCEEEEEESTT-----CEEEEEECSSSSCEEEEEEE--------CSSC--CCCEEECTTSSEEE-ECCCSS--SSCEE
T ss_pred CCCCEEEEEeCCC-----CeEEEEECCCCceeEEeccc--------CCCC--ccceEECCCCCEEE-EecCCC--CcccE
Confidence 344 466665532 3699999998874 222111 1111 23 22222 34566 332221 11269
Q ss_pred EEEECCCCcEEEeecCCCCCCcCcccEEEEECCc-EEEEEecCCCCccCCc-eEEEeCCCCce-EeecCCCCCCCccCCc
Q 013179 105 WVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSD-VYVLDTISLEW-MQLPVTGSVPPPRCGH 181 (448)
Q Consensus 105 ~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~-v~~yd~~t~~W-~~~~~~~~~p~~r~~~ 181 (448)
+++|+.+++-....+. ...-+.++...++ .+|+.+... +. +..|+.....- .... ....+....-.
T Consensus 111 ~v~d~~~~~~~~~~~~-----~~~~~~~~~spdg~~l~~~~~~~-----~~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~ 179 (331)
T 3u4y_A 111 QSYSFLKNKFISTIPI-----PYDAVGIAISPNGNGLILIDRSS-----ANTVRRFKIDADGVLFDTG-QEFISGGTRPF 179 (331)
T ss_dssp EEEETTTTEEEEEEEC-----CTTEEEEEECTTSSCEEEEEETT-----TTEEEEEEECTTCCEEEEE-EEEECSSSSEE
T ss_pred EEEECCCCCeEEEEEC-----CCCccceEECCCCCEEEEEecCC-----CceEEEEEECCCCcEeecC-CccccCCCCcc
Confidence 9999998876554432 2222445554454 477765432 23 66666543221 1100 00001111112
Q ss_pred eeEEe-CC-EEEEEcccCCCCCccCceeeecccccccCCCCce----EEecCCCCCCCCCceeEEEE--eCCEEEEEcCC
Q 013179 182 TATMV-EK-RLLIYGGRGGGGPIMGDLWALKGLIEEENETPGW----TQLKLPGQAPSSRCGHTITS--GGHYLLLFGGH 253 (448)
Q Consensus 182 ~~~~~-~~-~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W----~~~~~~g~~p~~r~~~~~~~--~~~~i~v~GG~ 253 (448)
.++.. ++ .+|+.+... ..+..||+++.+. ..++. ...-..+++ .+..+|+....
T Consensus 180 ~~~~spdg~~l~v~~~~~------------~~v~v~d~~~~~~~~~~~~~~~------~~~~~~~~~spdg~~l~v~~~~ 241 (331)
T 3u4y_A 180 NITFTPDGNFAFVANLIG------------NSIGILETQNPENITLLNAVGT------NNLPGTIVVSRDGSTVYVLTES 241 (331)
T ss_dssp EEEECTTSSEEEEEETTT------------TEEEEEECSSTTSCEEEEEEEC------SSCCCCEEECTTSSEEEEECSS
T ss_pred ceEECCCCCEEEEEeCCC------------CeEEEEECCCCcccceeeeccC------CCCCceEEECCCCCEEEEEEcC
Confidence 33333 34 477765332 2344557776664 22221 111123333 23457776532
Q ss_pred CCCCCcccccceeCcEEEEEcCCCceEEec
Q 013179 254 GTGGWLSRYDIYYNDTIILDRLSAQWKRLP 283 (448)
Q Consensus 254 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 283 (448)
. +.++++|+.+.+.+.+.
T Consensus 242 ~------------~~i~~~d~~~~~~~~~~ 259 (331)
T 3u4y_A 242 T------------VDVFNFNQLSGTLSFVK 259 (331)
T ss_dssp E------------EEEEEEETTTTEEEEEE
T ss_pred C------------CEEEEEECCCCceeeec
Confidence 1 35899999988875554
No 119
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=93.75 E-value=3.8 Score=37.04 Aligned_cols=107 Identities=9% Similarity=-0.055 Sum_probs=58.5
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..++.|+.++ .+.++|..++.-...-. ..........+.-++++++.|+.++ .+..+|
T Consensus 23 p~~~~l~s~~~dg-----~v~lWd~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~s~s~d~-----~i~vwd 83 (304)
T 2ynn_A 23 PTEPWVLTTLYSG-----RVELWNYETQVEVRSIQ---------VTETPVRAGKFIARKNWIIVGSDDF-----RIRVFN 83 (304)
T ss_dssp SSSSEEEEEETTS-----EEEEEETTTTEEEEEEE---------CCSSCEEEEEEEGGGTEEEEEETTS-----EEEEEE
T ss_pred CCCCEEEEEcCCC-----cEEEEECCCCceeEEee---------ccCCcEEEEEEeCCCCEEEEECCCC-----EEEEEE
Confidence 4567788887653 48889998875422211 1111222333334566777777543 488899
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
+.+++-...-. . ....-.+++...++.+++.|+.++ .+..+|..+.
T Consensus 84 ~~~~~~~~~~~---~-h~~~v~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~ 129 (304)
T 2ynn_A 84 YNTGEKVVDFE---A-HPDYIRSIAVHPTKPYVLSGSDDL-----TVKLWNWENN 129 (304)
T ss_dssp TTTCCEEEEEE---C-CSSCEEEEEECSSSSEEEEEETTS-----CEEEEEGGGT
T ss_pred CCCCcEEEEEe---C-CCCcEEEEEEcCCCCEEEEECCCC-----eEEEEECCCC
Confidence 98876433211 1 111122333334556777777554 3677887654
No 120
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=93.74 E-value=4.6 Score=38.03 Aligned_cols=109 Identities=9% Similarity=-0.012 Sum_probs=58.2
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEE-ECCeEEEEcccCCCCCCCcEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~-~~~~lyv~GG~~~~~~~~~~~~~ 107 (448)
.++..++.|+.++ .+.+||+.+++-...- ...... -.+++. -++++++.|+.++ .+..|
T Consensus 107 ~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~---------~~h~~~-v~~~~~~~~~~~l~s~s~d~-----~i~iw 166 (420)
T 3vl1_A 107 LQMRRFILGTTEG-----DIKVLDSNFNLQREID---------QAHVSE-ITKLKFFPSGEALISSSQDM-----QLKIW 166 (420)
T ss_dssp SSSCEEEEEETTS-----CEEEECTTSCEEEEET---------TSSSSC-EEEEEECTTSSEEEEEETTS-----EEEEE
T ss_pred cCCCEEEEEECCC-----CEEEEeCCCcceeeec---------ccccCc-cEEEEECCCCCEEEEEeCCC-----eEEEE
Confidence 4567788887543 4888998877543321 011111 122222 2566677776543 48889
Q ss_pred ECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceE
Q 013179 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (448)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (448)
|+.+.+-...-. . ....-.+++...++..++.|+.++ .+..||+.+.+-.
T Consensus 167 d~~~~~~~~~~~---~-h~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 167 SVKDGSNPRTLI---G-HRATVTDIAIIDRGRNVLSASLDG-----TIRLWECGTGTTI 216 (420)
T ss_dssp ETTTCCCCEEEE---C-CSSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTTEEE
T ss_pred eCCCCcCceEEc---C-CCCcEEEEEEcCCCCEEEEEcCCC-----cEEEeECCCCcee
Confidence 987764222111 0 111122333345556677777544 3778888776533
No 121
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.64 E-value=4 Score=36.99 Aligned_cols=104 Identities=9% Similarity=-0.043 Sum_probs=50.1
Q ss_pred cEEEEEcCCCCCcccCceEEEEcC-CCcEEeeeecCCCCCCCCCCCCCcceeEE-EECC-eEEEEcccCCCCCCCcEEEE
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDID-NKLWFQPECTGNGSNGQVGPGPRAFHIAV-AIDC-HMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~~~~~~~~~~~~p~~R~~h~~~-~~~~-~lyv~GG~~~~~~~~~~~~~ 107 (448)
+.+|+.++.+ +.+.+||+. +++...+.... ....-+.++ .-++ .||+.+. .. ..+..|
T Consensus 5 ~~l~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~spdg~~l~~~~~-~~----~~v~~~ 65 (343)
T 1ri6_A 5 QTVYIASPES-----QQIHVWNLNHEGALTLTQVVD---------VPGQVQPMVVSPDKRYLYVGVR-PE----FRVLAY 65 (343)
T ss_dssp EEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEE---------CSSCCCCEEECTTSSEEEEEET-TT----TEEEEE
T ss_pred EEEEEeCCCC-----CeEEEEEECCCCcEEEeeeEe---------cCCCCceEEECCCCCEEEEeec-CC----CeEEEE
Confidence 4566664432 457888874 45555443321 111112222 2244 4655543 21 346676
Q ss_pred ECC--CCcEEEeecCCCCCCcCcccEEEEECCc-EEEEEecCCCCccCCceEEEeCC
Q 013179 108 DTD--IWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTI 161 (448)
Q Consensus 108 d~~--t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~ 161 (448)
++. ++++..+.. .+....-..++...++ .+|+.+..+ ..+..||+.
T Consensus 66 ~~~~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~ 114 (343)
T 1ri6_A 66 RIAPDDGALTFAAE---SALPGSLTHISTDHQGQFVFVGSYNA-----GNVSVTRLE 114 (343)
T ss_dssp EECTTTCCEEEEEE---EECSSCCSEEEECTTSSEEEEEETTT-----TEEEEEEEE
T ss_pred EecCCCCceeeccc---cccCCCCcEEEEcCCCCEEEEEecCC-----CeEEEEECC
Confidence 665 778876653 2222222334444444 455554321 347788773
No 122
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=93.61 E-value=5.4 Score=38.33 Aligned_cols=177 Identities=14% Similarity=0.022 Sum_probs=89.7
Q ss_pred ECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 85 IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 85 ~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
.++.+++.|+.++ .+..||+.+.+-...-. .. ...-.+++...++..++.|+.++ .+..||+.+.+
T Consensus 278 ~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~---~~-~~~v~~~~~~~~~~~l~sg~~dg-----~i~vwd~~~~~ 343 (464)
T 3v7d_B 278 GHGNIVVSGSYDN-----TLIVWDVAQMKCLYILS---GH-TDRIYSTIYDHERKRCISASMDT-----TIRIWDLENGE 343 (464)
T ss_dssp EETTEEEEEETTS-----CEEEEETTTTEEEEEEC---CC-SSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTTE
T ss_pred CCCCEEEEEeCCC-----eEEEEECCCCcEEEEec---CC-CCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCc
Confidence 4456666776543 48999998876543321 11 11223334445556777776544 38889988765
Q ss_pred eEeecCCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeC
Q 013179 165 WMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGG 244 (448)
Q Consensus 165 W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~ 244 (448)
-...- ......-..+...+..++.|+.++ .+..||+.+..-..... ........+...+
T Consensus 344 ~~~~~-----~~h~~~v~~~~~~~~~l~s~s~dg------------~v~vwd~~~~~~~~~~~----~~~~~~~~~~~~~ 402 (464)
T 3v7d_B 344 LMYTL-----QGHTALVGLLRLSDKFLVSAAADG------------SIRGWDANDYSRKFSYH----HTNLSAITTFYVS 402 (464)
T ss_dssp EEEEE-----CCCSSCEEEEEECSSEEEEEETTS------------EEEEEETTTCCEEEEEE----CTTCCCEEEEEEC
T ss_pred EEEEE-----eCCCCcEEEEEEcCCEEEEEeCCC------------cEEEEECCCCceeeeec----CCCCccEEEEEeC
Confidence 43321 111111233334566666776542 23445665544222211 1111222333456
Q ss_pred CEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEccCCC
Q 013179 245 HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (448)
Q Consensus 245 ~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 312 (448)
+.+++.|+ + +.+.+||+.+.+-........ ...-.++...++.+++.++.++
T Consensus 403 ~~~l~~~~-d------------g~i~iwd~~~g~~~~~~~~~~---~~~v~~v~~~~~~l~~~~~~~g 454 (464)
T 3v7d_B 403 DNILVSGS-E------------NQFNIYNLRSGKLVHANILKD---ADQIWSVNFKGKTLVAAVEKDG 454 (464)
T ss_dssp SSEEEEEE-T------------TEEEEEETTTCCEEESCTTTT---CSEEEEEEEETTEEEEEEEETT
T ss_pred CCEEEEec-C------------CeEEEEECCCCcEEehhhccC---CCcEEEEEecCCEEEEEEEeCC
Confidence 66667665 2 358999998887554322211 1222333334666666665543
No 123
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=93.50 E-value=4.5 Score=37.13 Aligned_cols=228 Identities=12% Similarity=0.007 Sum_probs=112.1
Q ss_pred CceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCCCcEEEEECCCC--cEEEeecC--
Q 013179 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVLDTDIW--QWSELTSF-- 120 (448)
Q Consensus 46 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~t~--~W~~~~~~-- 120 (448)
+.++++|+.+++....... ... ..-+.+++. +++||+....+ ..+.+||+... .-..+...
T Consensus 69 ~~i~~~d~~~g~~~~~~~~--------~~~-~~p~gia~d~~g~l~v~d~~~-----~~v~~~~~~g~~~~~~~~~~~~~ 134 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGK--------NLF-YLPHGLSIDTDGNYWVTDVAL-----HQVFKLDPHSKEGPLLILGRSMQ 134 (329)
T ss_dssp CCEEEECTTTCCEEEEECT--------TTC-SSEEEEEECTTSCEEEEETTT-----TEEEEECTTCSSCCSEEESBTTB
T ss_pred CcEEEEECCCCeEEeccCC--------Ccc-CCceEEEECCCCCEEEEECCC-----CEEEEEeCCCCeEEEEEecccCC
Confidence 3699999998876443211 011 112333333 56799876432 35899998765 22223210
Q ss_pred -CCCCCcCccc-EEEEEC-CcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCC----CCccCC-ceeEEe-C-CEE
Q 013179 121 -GDLPSPRDFA-AASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSV----PPPRCG-HTATMV-E-KRL 190 (448)
Q Consensus 121 -~~~p~~r~~~-~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~----p~~r~~-~~~~~~-~-~~l 190 (448)
+..+...... .+++.. ++.||+..++. -..+.+||.....-..+...+.. +..... +.+++. + +.|
T Consensus 135 ~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l 210 (329)
T 3fvz_A 135 PGSDQNHFCQPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQL 210 (329)
T ss_dssp CCCSTTCCSSEEEEEECTTTCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEE
T ss_pred CCCCccccCCCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEE
Confidence 0001111122 333333 67999987532 24588999654444434322211 111122 233333 3 789
Q ss_pred EEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCcccccceeCcEE
Q 013179 191 LIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTI 270 (448)
Q Consensus 191 yv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~ 270 (448)
||..... ..+..||+++.+....-. .......-.+++...+.+|+..|...-. +.....+.
T Consensus 211 ~v~d~~~------------~~I~~~~~~~G~~~~~~~--~~~~~~~~~~~~~~pg~~~~~~g~~~v~-----~~~~~~v~ 271 (329)
T 3fvz_A 211 CVADREN------------GRIQCFKTDTKEFVREIK--HASFGRNVFAISYIPGFLFAVNGKPYFG-----DQEPVQGF 271 (329)
T ss_dssp EEEETTT------------TEEEEEETTTCCEEEEEC--CTTTTTCEEEEEEETTEEEEEECCCCTT-----CSCCCCEE
T ss_pred EEEECCC------------CEEEEEECCCCcEEEEEe--ccccCCCcceeeecCCEEEEeCCCEEec-----cCCCcEEE
Confidence 9886432 345566887665543321 1111122224444457777777643211 22335799
Q ss_pred EEEcCCCceEEeccCCCCCCCccceEEEEE-CCEEEEEccCC
Q 013179 271 ILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFD 311 (448)
Q Consensus 271 ~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~ 311 (448)
++|+.+.+....-... ......-+++++- ++.|||....+
T Consensus 272 ~~~~~~g~~~~~~~~~-~~~~~~p~~ia~~~dG~lyvad~~~ 312 (329)
T 3fvz_A 272 VMNFSSGEIIDVFKPV-RKHFDMPHDIVASEDGTVYIGDAHT 312 (329)
T ss_dssp EEETTTCCEEEEECCS-SSCCSSEEEEEECTTSEEEEEESSS
T ss_pred EEEcCCCeEEEEEcCC-CCccCCeeEEEECCCCCEEEEECCC
Confidence 9998887765542211 1111222333333 46888876543
No 124
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=93.50 E-value=3.4 Score=42.75 Aligned_cols=69 Identities=16% Similarity=0.160 Sum_probs=40.8
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCC---cEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNK---LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFW 105 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~ 105 (448)
.+++.++++.. ..++++|+.++ .-..+.. ........+..-+++.++++.. ..++
T Consensus 118 pDg~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~----------~~~~~~~~~~SPDG~~la~~~~------~~i~ 175 (741)
T 2ecf_A 118 PDAQRLLFPLG------GELYLYDLKQEGKAAVRQLTH----------GEGFATDAKLSPKGGFVSFIRG------RNLW 175 (741)
T ss_dssp TTSSEEEEEET------TEEEEEESSSCSTTSCCBCCC----------SSSCEEEEEECTTSSEEEEEET------TEEE
T ss_pred CCCCEEEEEeC------CcEEEEECCCCCcceEEEccc----------CCcccccccCCCCCCEEEEEeC------CcEE
Confidence 45666666553 67999999887 5444321 1112222333335665555432 2699
Q ss_pred EEECCCCcEEEeec
Q 013179 106 VLDTDIWQWSELTS 119 (448)
Q Consensus 106 ~~d~~t~~W~~~~~ 119 (448)
++|+.+++..++..
T Consensus 176 ~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 176 VIDLASGRQMQLTA 189 (741)
T ss_dssp EEETTTTEEEECCC
T ss_pred EEecCCCCEEEecc
Confidence 99999988877654
No 125
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=93.44 E-value=0.64 Score=43.74 Aligned_cols=110 Identities=13% Similarity=0.009 Sum_probs=59.6
Q ss_pred CceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCC-CCCCCcEEEEECCCCcEEEeecCCCC
Q 013179 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFG-SRRLGDFWVLDTDIWQWSELTSFGDL 123 (448)
Q Consensus 46 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~-~~~~~~~~~~d~~t~~W~~~~~~~~~ 123 (448)
..++.+|+.+++-..+... ..+..+....- +++.+++..... ......+|.+|+.+.....+.. .
T Consensus 168 ~~l~~~d~~~g~~~~l~~~----------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~ 234 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQE----------NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT---H 234 (388)
T ss_dssp EEEEEEETTTCCEEEEEEE----------SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC---C
T ss_pred ceEEEEECCCCceEEeecC----------CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee---C
Confidence 5789999999876666532 12234444444 455444433222 2224579999998887766653 1
Q ss_pred CCcCcccEEEEECCcE-EEEEecCCCCccCCceEEEeCCCCceEeec
Q 013179 124 PSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTISLEWMQLP 169 (448)
Q Consensus 124 p~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~ 169 (448)
+........+...+++ |+......+ .....++.+|+.+.+-+.+.
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g~~~~l~ 280 (388)
T 3pe7_A 235 AEGESCTHEFWVPDGSALVYVSYLKG-SPDRFIYSADPETLENRQLT 280 (388)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETT-CCCEEEEEECTTTCCEEEEE
T ss_pred CCCcccccceECCCCCEEEEEecCCC-CCcceEEEEecCCCceEEEE
Confidence 1111111222234444 544332211 11124999999998877664
No 126
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.43 E-value=3.7 Score=38.13 Aligned_cols=109 Identities=15% Similarity=0.160 Sum_probs=56.5
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCCCcEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~~~~~~~ 107 (448)
.++..++.|+.++ .+.++|+.+++-... . ..+.......++.. +..+++.|+.++ .+..+
T Consensus 137 pdg~~l~sgs~d~-----~i~iwd~~~~~~~~~--~-------~~h~~~V~~~~~~~~~~~~l~s~s~D~-----~v~iw 197 (344)
T 4gqb_B 137 SSGTQAVSGSKDI-----CIKVWDLAQQVVLSS--Y-------RAHAAQVTCVAASPHKDSVFLSCSEDN-----RILLW 197 (344)
T ss_dssp TTSSEEEEEETTS-----CEEEEETTTTEEEEE--E-------CCCSSCEEEEEECSSCTTEEEEEETTS-----CEEEE
T ss_pred CCCCEEEEEeCCC-----eEEEEECCCCcEEEE--E-------cCcCCceEEEEecCCCCCceeeecccc-----ccccc
Confidence 4567777777643 488899988753221 1 11222222222222 335777777654 48889
Q ss_pred ECCCCcEEEeecCCCCCCcCcccEEEEE--CCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 108 DTDIWQWSELTSFGDLPSPRDFAAASAI--GNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
|+.+.+-..... .........++.. .++.+++.|+.++ .+..||+.+.+
T Consensus 198 d~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~l~sg~~dg-----~v~~wd~~~~~ 248 (344)
T 4gqb_B 198 DTRCPKPASQIG---CSAPGYLPTSLAWHPQQSEVFVFGDENG-----TVSLVDTKSTS 248 (344)
T ss_dssp ETTSSSCEEECC-------CCCEEEEEECSSCTTEEEEEETTS-----EEEEEESCC--
T ss_pred cccccceeeeee---cceeeccceeeeecCCCCcceEEeccCC-----cEEEEECCCCc
Confidence 998876433221 1111111122222 3446778887544 37788887654
No 127
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=93.40 E-value=4.4 Score=36.71 Aligned_cols=137 Identities=14% Similarity=0.126 Sum_probs=64.1
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..++.|+.++ .+..++............ ...........-.+..++.|+.++ .+..+|
T Consensus 96 ~dg~~l~s~~~d~-----~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~s~s~d~-----~~~~~d 156 (340)
T 4aow_A 96 SDGQFALSGSWDG-----TLRLWDLTTGTTTRRFVG---------HTKDVLSVAFSSDNRQIVSGSRDK-----TIKLWN 156 (340)
T ss_dssp TTSSEEEEEETTS-----EEEEEETTTTEEEEEEEC---------CSSCEEEEEECTTSSCEEEEETTS-----CEEEEC
T ss_pred CCCCEEEEEcccc-----cceEEeecccceeeeecC---------CCCceeEEEEeecCccceeecCCC-----eEEEEE
Confidence 4566777777543 367777777765443321 111112222222445566666543 366677
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEEE---CCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEE
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASAI---GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATM 185 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~---~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~ 185 (448)
.....-..... .........+.+ ....+++.|+.++ .+..||..+.+....- ..... .-.+++.
T Consensus 157 ~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~s~~~d~-----~i~i~d~~~~~~~~~~---~~h~~-~v~~~~~ 223 (340)
T 4aow_A 157 TLGVCKYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWDK-----LVKVWNLANCKLKTNH---IGHTG-YLNTVTV 223 (340)
T ss_dssp TTSCEEEEECS----SSCSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTTEEEEEE---CCCSS-CEEEEEE
T ss_pred eCCCceEEEEe----ccccCcccceEEccCCCCcEEEEEcCCC-----EEEEEECCCCceeeEe---cCCCC-cEEEEEE
Confidence 76544333221 111111112222 2235666666543 3778888877654332 11111 1112222
Q ss_pred e-CCEEEEEcccC
Q 013179 186 V-EKRLLIYGGRG 197 (448)
Q Consensus 186 ~-~~~lyv~GG~~ 197 (448)
. ++++++.|+.+
T Consensus 224 s~~~~~l~s~s~D 236 (340)
T 4aow_A 224 SPDGSLCASGGKD 236 (340)
T ss_dssp CTTSSEEEEEETT
T ss_pred CCCCCEEEEEeCC
Confidence 2 56677777764
No 128
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=93.35 E-value=2.7 Score=42.77 Aligned_cols=204 Identities=14% Similarity=-0.002 Sum_probs=100.1
Q ss_pred CceEEEEcC--C-CcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCC-----CCCCCcEEEEECCC------
Q 013179 46 SDVVVYDID--N-KLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFG-----SRRLGDFWVLDTDI------ 111 (448)
Q Consensus 46 ~~~~~yd~~--~-~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~-----~~~~~~~~~~d~~t------ 111 (448)
..+|.+++. . +.-..+..... .....+....+..-+++.+++..... .....+++.+|+.+
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~-----~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSA-----VGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCC-----STTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred CeEEEEcCCCCCCCCCEeccCCcc-----CCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 568888887 3 55555542100 00122333333444555444544321 12235799999998
Q ss_pred CcEEEee-cCCCCCCcCcccEEEEECCcEEEEEecCCCCc---cCCceEEEeCC-CC---ceEeecCCCCCCCccCCcee
Q 013179 112 WQWSELT-SFGDLPSPRDFAAASAIGNRKIVMYGGWDGKK---WLSDVYVLDTI-SL---EWMQLPVTGSVPPPRCGHTA 183 (448)
Q Consensus 112 ~~W~~~~-~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~---~~~~v~~yd~~-t~---~W~~~~~~~~~p~~r~~~~~ 183 (448)
.+-+.+. . ........+...|++.+++...+... ...+++.+|+. ++ +...+. ... .......
T Consensus 177 ~~~~~l~~~-----~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~---~~~-~~~~~~~ 247 (662)
T 3azo_A 177 SAVRELSDD-----AHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL---GGP-EEAIAQA 247 (662)
T ss_dssp GGSEESSCS-----CSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE---EET-TBCEEEE
T ss_pred CceeEEEec-----CCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC---CCC-CceEcce
Confidence 6766654 2 11122222333455444444332211 12579999998 56 444443 110 1111222
Q ss_pred EEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCC-C--CCCCc-eeEEEEe-CCEEEEEcCCCCCC
Q 013179 184 TMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQ-A--PSSRC-GHTITSG-GHYLLLFGGHGTGG 257 (448)
Q Consensus 184 ~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~-~--p~~r~-~~~~~~~-~~~i~v~GG~~~~~ 257 (448)
... ++++|+.+..++. ..++.+|+++.++..+..... . |.-.. ..+.+.. ++++++.+.. .
T Consensus 248 ~~spdg~l~~~~~~~~~----------~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~-- 314 (662)
T 3azo_A 248 EWAPDGSLIVATDRTGW----------WNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G-- 314 (662)
T ss_dssp EECTTSCEEEEECTTSS----------CEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S--
T ss_pred EECCCCeEEEEECCCCC----------eEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C--
Confidence 222 5677766654321 123445887888887752110 0 10000 1123333 5677666643 2
Q ss_pred CcccccceeCcEEEEEcCCCceEEecc
Q 013179 258 WLSRYDIYYNDTIILDRLSAQWKRLPI 284 (448)
Q Consensus 258 ~~~~~~~~~~~v~~yd~~~~~W~~~~~ 284 (448)
...+|.+|+.+.....+..
T Consensus 315 --------~~~l~~~d~~~~~~~~l~~ 333 (662)
T 3azo_A 315 --------AAVLGILDPESGELVDAAG 333 (662)
T ss_dssp --------SCEEEEEETTTTEEEECCS
T ss_pred --------ccEEEEEECCCCcEEEecC
Confidence 2579999998887777644
No 129
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.24 E-value=7.7 Score=39.03 Aligned_cols=123 Identities=11% Similarity=0.040 Sum_probs=66.1
Q ss_pred ECCcEEEEEcCCCCCcccCceEEEEc-CCCc--EEeeeecCCCCCCCCCCCC---CcceeEEEECCeEEEEcccCCCCCC
Q 013179 28 IGKSKVVVFGGLVDKRFLSDVVVYDI-DNKL--WFQPECTGNGSNGQVGPGP---RAFHIAVAIDCHMFIFGGRFGSRRL 101 (448)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~~~~yd~-~~~~--W~~~~~~~~~~~~~~~p~~---R~~h~~~~~~~~lyv~GG~~~~~~~ 101 (448)
+.+++||+.... ...++.+|. .+++ |+.-..... ...+.+ ....+.++.+++||+... .
T Consensus 60 v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~v~~~------d 124 (571)
T 2ad6_A 60 VIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDA----STKAVMCCDVVDRGLAYGAGQIVKKQA------N 124 (571)
T ss_dssp EETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCG----GGGGGCTTCSCCCCCEEETTEEEEECT------T
T ss_pred EECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCc----cccccccccccccccEEECCEEEEEeC------C
Confidence 334889987653 246999999 7774 876431100 000000 112234567888888743 2
Q ss_pred CcEEEEECCCCc--EEEeecCCCCCCc-CcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc--eEee
Q 013179 102 GDFWVLDTDIWQ--WSELTSFGDLPSP-RDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQL 168 (448)
Q Consensus 102 ~~~~~~d~~t~~--W~~~~~~~~~p~~-r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~ 168 (448)
..++.+|..|++ |+.-.. ..+.. ....+.++. ++.+|+-.+..+...-..++.||..+++ |+.-
T Consensus 125 g~l~alD~~tG~~~W~~~~~--~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 125 GHLLALDAKTGKINWEVEVC--DPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp SEEEEEETTTCCEEEEEECC--CGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEEEEecCC--CCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 359999998874 875431 11111 111222334 4578765432111123468999998755 7754
No 130
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=93.20 E-value=5.3 Score=37.07 Aligned_cols=178 Identities=12% Similarity=-0.017 Sum_probs=82.5
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEE--CCcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI--GNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
++..++.|+.+ ..+..+|+.+.+-...-. ..... ..+.... .++..++.|+.++ .+..||+.+.
T Consensus 165 ~~~~l~t~s~D-----~~v~lwd~~~~~~~~~~~---~h~~~-v~~~~~~~~~~g~~l~sgs~Dg-----~v~~wd~~~~ 230 (354)
T 2pbi_B 165 SDMQILTASGD-----GTCALWDVESGQLLQSFH---GHGAD-VLCLDLAPSETGNTFVSGGCDK-----KAMVWDMRSG 230 (354)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTCCEEEEEE---CCSSC-EEEEEECCCSSCCEEEEEETTS-----CEEEEETTTC
T ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEEEEc---CCCCC-eEEEEEEeCCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 34455555543 248888998876543321 11111 1112221 2346777787654 3788998887
Q ss_pred ceEeecCCCCCCCccCCceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCcee-EEE
Q 013179 164 EWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGH-TIT 241 (448)
Q Consensus 164 ~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~-~~~ 241 (448)
+....- ..... .-.++... ++.+++.|+.++. +..||+.+..-..+-. ........ ++.
T Consensus 231 ~~~~~~---~~h~~-~v~~v~~~p~~~~l~s~s~D~~------------v~lwd~~~~~~~~~~~---~~~~~~~~~~~~ 291 (354)
T 2pbi_B 231 QCVQAF---ETHES-DVNSVRYYPSGDAFASGSDDAT------------CRLYDLRADREVAIYS---KESIIFGASSVD 291 (354)
T ss_dssp CEEEEE---CCCSS-CEEEEEECTTSSEEEEEETTSC------------EEEEETTTTEEEEEEC---CTTCCSCEEEEE
T ss_pred cEEEEe---cCCCC-CeEEEEEeCCCCEEEEEeCCCe------------EEEEECCCCcEEEEEc---CCCcccceeEEE
Confidence 654332 11111 11122222 4567777775432 3345665543322211 11111111 222
Q ss_pred E-eCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceE-EeccCCCCCCCccceEEEEECCEEEEEccCCC
Q 013179 242 S-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWK-RLPIGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (448)
Q Consensus 242 ~-~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~-~~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 312 (448)
. .++.+++.|+.+ ..+.+||+.+.+=. .+... .......+..-++++++.|+.++
T Consensus 292 ~s~~g~~l~~g~~d------------~~i~vwd~~~~~~~~~l~~h----~~~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 292 FSLSGRLLFAGYND------------YTINVWDVLKGSRVSILFGH----ENRVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp ECTTSSEEEEEETT------------SCEEEEETTTCSEEEEECCC----SSCEEEEEECTTSSCEEEEETTS
T ss_pred EeCCCCEEEEEECC------------CcEEEEECCCCceEEEEECC----CCcEEEEEECCCCCEEEEEcCCC
Confidence 2 345666666543 35888898665422 22111 11111112222566777777654
No 131
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.00 E-value=7.9 Score=38.50 Aligned_cols=111 Identities=10% Similarity=0.012 Sum_probs=56.2
Q ss_pred EEEEECCcEEEEEcCCCCCcccCceEEEEcCCC----c-EEeeeecCCCCCCCCCCCCC-cceeEEEE--CCeEEEEccc
Q 013179 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNK----L-WFQPECTGNGSNGQVGPGPR-AFHIAVAI--DCHMFIFGGR 95 (448)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~----~-W~~~~~~~~~~~~~~~p~~R-~~h~~~~~--~~~lyv~GG~ 95 (448)
++....++..+++|+ + +.+.+||+.+. + -..+. ..... ....+..- ++++++.|+.
T Consensus 23 ~~~~spdg~~l~~~~--~----~~v~v~~~~~~~~~~~~~~~~~----------~h~~~~v~~~~~sp~~~~~~l~s~~~ 86 (615)
T 1pgu_A 23 HLSYDPTTNAIAYPC--G----KSAFVRCLDDGDSKVPPVVQFT----------GHGSSVVTTVKFSPIKGSQYLCSGDE 86 (615)
T ss_dssp CCEEETTTTEEEEEE--T----TEEEEEECCSSCCSSCSEEEEC----------TTTTSCEEEEEECSSTTCCEEEEEET
T ss_pred EEEECCCCCEEEEec--C----CeEEEEECCCCCCccccceEEe----------cCCCceEEEEEECcCCCCCEEEEecC
Confidence 333445566777776 1 35889999876 3 22221 12222 22333333 5677777775
Q ss_pred CCCCCCCcEEEEECCCC------cEEEeecCCCCC-CcCcccEEEEECCcEEEEEecCCCCccCCceEEEe
Q 013179 96 FGSRRLGDFWVLDTDIW------QWSELTSFGDLP-SPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLD 159 (448)
Q Consensus 96 ~~~~~~~~~~~~d~~t~------~W~~~~~~~~~p-~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd 159 (448)
++ .+.++|+.+. ....+.. +. ....-.+++...+++.++.++.+... ...++.+|
T Consensus 87 dg-----~v~vw~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~v~~~d 148 (615)
T 1pgu_A 87 SG-----KVIVWGWTFDKESNSVEVNVKSE---FQVLAGPISDISWDFEGRRLCVVGEGRDN-FGVFISWD 148 (615)
T ss_dssp TS-----EEEEEEEEEEGGGTEEEEEEEEE---EECCSSCEEEEEECTTSSEEEEEECCSSC-SEEEEETT
T ss_pred CC-----EEEEEeCCCCcccccccccccch---hhcccccEEEEEEeCCCCEEEEeccCCCC-ccEEEEEE
Confidence 43 4777777654 3333322 11 11122333334555666666654322 34567776
No 132
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.98 E-value=4.9 Score=37.43 Aligned_cols=106 Identities=12% Similarity=0.001 Sum_probs=54.4
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE--CCeEEEEcccCCCCCCCcEEEE
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv~GG~~~~~~~~~~~~~ 107 (448)
++.+++.|+.+ ..+.+||+.+.+-...... +.+......... ++.+++.|+.++ .+..|
T Consensus 111 ~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~ 171 (408)
T 4a11_B 111 DTGMFTSSSFD-----KTLKVWDTNTLQTADVFNF---------EETVYSHHMSPVSTKHCLVAVGTRGP-----KVQLC 171 (408)
T ss_dssp CTTCEEEEETT-----SEEEEEETTTTEEEEEEEC---------SSCEEEEEECSSCSSCCEEEEEESSS-----SEEEE
T ss_pred CCcEEEEEeCC-----CeEEEeeCCCCccceeccC---------CCceeeeEeecCCCCCcEEEEEcCCC-----eEEEE
Confidence 45577777654 3488899998865443311 111111111111 334677776543 48889
Q ss_pred ECCCCcEEEeecCCCCCCcCcccEEEEECCcE-EEEEecCCCCccCCceEEEeCCCC
Q 013179 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
|+.+.+-...-. .. ...-.+++...++. +++.|+.++ .+..||+.+.
T Consensus 172 d~~~~~~~~~~~---~~-~~~v~~~~~~~~~~~ll~~~~~dg-----~i~i~d~~~~ 219 (408)
T 4a11_B 172 DLKSGSCSHILQ---GH-RQEILAVSWSPRYDYILATASADS-----RVKLWDVRRA 219 (408)
T ss_dssp ESSSSCCCEEEC---CC-CSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTCS
T ss_pred eCCCcceeeeec---CC-CCcEEEEEECCCCCcEEEEEcCCC-----cEEEEECCCC
Confidence 988765332221 01 11112222333333 777777554 3778887654
No 133
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=92.98 E-value=6.6 Score=37.54 Aligned_cols=218 Identities=14% Similarity=0.063 Sum_probs=104.6
Q ss_pred EEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCC
Q 013179 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDI 111 (448)
Q Consensus 32 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t 111 (448)
..++.|+.+ ..+.+||+.+++-...-. .....-.++..++..++.|+.++ .+..+|+.+
T Consensus 210 ~~l~s~s~d-----g~i~~wd~~~~~~~~~~~-----------~~~~~v~~~~~~~~~l~~~~~dg-----~i~iwd~~~ 268 (445)
T 2ovr_B 210 KRVVSGSRD-----ATLRVWDIETGQCLHVLM-----------GHVAAVRCVQYDGRRVVSGAYDF-----MVKVWDPET 268 (445)
T ss_dssp TEEEEEETT-----SEEEEEESSSCCEEEEEE-----------CCSSCEEEEEECSSCEEEEETTS-----CEEEEEGGG
T ss_pred CEEEEEeCC-----CEEEEEECCCCcEEEEEc-----------CCcccEEEEEECCCEEEEEcCCC-----EEEEEECCC
Confidence 345666643 348889988775432211 01112223344777777777553 488899887
Q ss_pred CcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEeCCEEE
Q 013179 112 WQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLL 191 (448)
Q Consensus 112 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~ly 191 (448)
.+-...- ......-.+... ++..++.|+.++ .+..||+.+.+-...- . ...........++..+
T Consensus 269 ~~~~~~~-----~~~~~~v~~~~~-~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~---~--~~~~~v~~~~~~~~~l 332 (445)
T 2ovr_B 269 ETCLHTL-----QGHTNRVYSLQF-DGIHVVSGSLDT-----SIRVWDVETGNCIHTL---T--GHQSLTSGMELKDNIL 332 (445)
T ss_dssp TEEEEEE-----CCCSSCEEEEEE-CSSEEEEEETTS-----CEEEEETTTCCEEEEE---C--CCCSCEEEEEEETTEE
T ss_pred CcEeEEe-----cCCCCceEEEEE-CCCEEEEEeCCC-----eEEEEECCCCCEEEEE---c--CCcccEEEEEEeCCEE
Confidence 6543322 111111223333 445666676543 4788998876543321 1 1111112223345566
Q ss_pred EEcccCCCCCccCceeeecccccccCCCCceEE-ecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCcccccceeCcEE
Q 013179 192 IYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ-LKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTI 270 (448)
Q Consensus 192 v~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~-~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~ 270 (448)
+.|+.++ .+..||+.+.+-.. +.. .... ...-.++..++.+++.|+.+ ..+.
T Consensus 333 ~~~~~dg------------~i~vwd~~~~~~~~~~~~--~~~~-~~~v~~~~~~~~~l~s~~~d------------g~v~ 385 (445)
T 2ovr_B 333 VSGNADS------------TVKIWDIKTGQCLQTLQG--PNKH-QSAVTCLQFNKNFVITSSDD------------GTVK 385 (445)
T ss_dssp EEEETTS------------CEEEEETTTCCEEEEECS--TTSC-SSCEEEEEECSSEEEEEETT------------SEEE
T ss_pred EEEeCCC------------eEEEEECCCCcEEEEEcc--CCCC-CCCEEEEEECCCEEEEEeCC------------CeEE
Confidence 6666542 23445665554322 221 0011 11112233455666676643 3588
Q ss_pred EEEcCCCceEEec-cCCCCCCCccceEEEEE-CCEEEEEccCCCC
Q 013179 271 ILDRLSAQWKRLP-IGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (448)
Q Consensus 271 ~yd~~~~~W~~~~-~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~ 313 (448)
+||+.+.+....- .....+..-.-.++... ++.+++.|+.++.
T Consensus 386 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 386 LWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred EEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 9999887654322 11100001111222222 4566677777664
No 134
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=92.95 E-value=2.6 Score=39.03 Aligned_cols=186 Identities=8% Similarity=0.022 Sum_probs=88.9
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCce
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (448)
++++++.||.++ .+..+|..+..|......... ....-.+++...++..++.|+.++. +..+|..+..+
T Consensus 27 ~g~~las~~~D~-----~i~iw~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~g~~l~s~s~D~~-----v~iw~~~~~~~ 95 (345)
T 3fm0_A 27 AGTLLASCGGDR-----RIRIWGTEGDSWICKSVLSEG-HQRTVRKVAWSPCGNYLASASFDAT-----TCIWKKNQDDF 95 (345)
T ss_dssp TSSCEEEEETTS-----CEEEEEEETTEEEEEEEECSS-CSSCEEEEEECTTSSEEEEEETTSC-----EEEEEECCC-E
T ss_pred CCCEEEEEcCCC-----eEEEEEcCCCcceeeeeeccc-cCCcEEEEEECCCCCEEEEEECCCc-----EEEEEccCCCe
Confidence 567777777654 477888888877543320000 1111122333355677777876543 66777777766
Q ss_pred EeecCCCCCCCccCC-ceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCC-ceEEecCCCCCCCCCceeEEEE
Q 013179 166 MQLPVTGSVPPPRCG-HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETP-GWTQLKLPGQAPSSRCGHTITS 242 (448)
Q Consensus 166 ~~~~~~~~~p~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~-~W~~~~~~g~~p~~r~~~~~~~ 242 (448)
+.+. .+...... .++... ++++++.|+.++. +..+|+.+. .+..+..... .... -.+++.
T Consensus 96 ~~~~---~~~~h~~~v~~v~~sp~~~~l~s~s~D~~------------v~iwd~~~~~~~~~~~~~~~-h~~~-v~~~~~ 158 (345)
T 3fm0_A 96 ECVT---TLEGHENEVKSVAWAPSGNLLATCSRDKS------------VWVWEVDEEDEYECVSVLNS-HTQD-VKHVVW 158 (345)
T ss_dssp EEEE---EECCCSSCEEEEEECTTSSEEEEEETTSC------------EEEEEECTTSCEEEEEEECC-CCSC-EEEEEE
T ss_pred EEEE---EccCCCCCceEEEEeCCCCEEEEEECCCe------------EEEEECCCCCCeEEEEEecC-cCCC-eEEEEE
Confidence 5443 11111111 122222 4667777776432 223344432 2222221001 1111 112222
Q ss_pred -eCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEE-ECCEEEEEccCCCC
Q 013179 243 -GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTC-LGSLYLLFGGFDGK 313 (448)
Q Consensus 243 -~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~ 313 (448)
-++.+++.|+.+ ..+.+||..+..|..+..... . ...-.++.. -++++++.|+.++.
T Consensus 159 ~p~~~~l~s~s~d------------~~i~~w~~~~~~~~~~~~~~~-h-~~~v~~l~~sp~g~~l~s~s~D~~ 217 (345)
T 3fm0_A 159 HPSQELLASASYD------------DTVKLYREEEDDWVCCATLEG-H-ESTVWSLAFDPSGQRLASCSDDRT 217 (345)
T ss_dssp CSSSSCEEEEETT------------SCEEEEEEETTEEEEEEEECC-C-SSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCCCEEEEEeCC------------CcEEEEEecCCCEEEEEEecC-C-CCceEEEEECCCCCEEEEEeCCCe
Confidence 345566666644 247788888888875544321 1 111122222 24667777776653
No 135
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=92.95 E-value=2.2 Score=39.04 Aligned_cols=156 Identities=9% Similarity=0.020 Sum_probs=81.5
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCce
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (448)
+++||+.+... ..+++||+.+++...+.. +....-++++...++++|+...... .....+++||+.+...
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~----~~~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFV----SHKANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAATENGDNL 124 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEE----CSSSSEEEEEECTTSCEEEEECTTS-SSCCEEEEECTTSCSC
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEee----CCCCCcceEEECCCCcEEEEeCCCC-CCCceEEEEeCCCCEE
Confidence 56788876533 359999999998877642 1112233444445678888754321 1124699999988876
Q ss_pred EeecCCCCCCCccCCceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEe-
Q 013179 166 MQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG- 243 (448)
Q Consensus 166 ~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~- 243 (448)
..+.. .......-..++.. ++++|+........... ..++.+|+++.+...+.. .. .....++..
T Consensus 125 ~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~------~~l~~~~~~~~~~~~~~~--~~---~~~~~i~~~~ 191 (333)
T 2dg1_A 125 QDIIE--DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPL------GGVYYVSPDFRTVTPIIQ--NI---SVANGIALST 191 (333)
T ss_dssp EEEEC--SSSSCCCEEEEEECTTSCEEEEECCCBTTBCC------EEEEEECTTSCCEEEEEE--EE---SSEEEEEECT
T ss_pred EEEEc--cCccCCcccceEECCCCCEEEEeccccccCCC------ceEEEEeCCCCEEEEeec--CC---CcccceEECC
Confidence 64321 11111111222222 56777754321111011 234455877766665431 11 112234442
Q ss_pred C-CEEEEEcCCCCCCCcccccceeCcEEEEEcCC
Q 013179 244 G-HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLS 276 (448)
Q Consensus 244 ~-~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~ 276 (448)
+ +.||+.... .+.+++||+.+
T Consensus 192 dg~~l~v~~~~------------~~~i~~~d~~~ 213 (333)
T 2dg1_A 192 DEKVLWVTETT------------ANRLHRIALED 213 (333)
T ss_dssp TSSEEEEEEGG------------GTEEEEEEECT
T ss_pred CCCEEEEEeCC------------CCeEEEEEecC
Confidence 3 357776422 24689999854
No 136
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=92.80 E-value=6.5 Score=37.02 Aligned_cols=182 Identities=11% Similarity=-0.018 Sum_probs=89.7
Q ss_pred CceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEE-ECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCC
Q 013179 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLP 124 (448)
Q Consensus 46 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p 124 (448)
..+.+||..+++....... .....-.+++. -++.+++.|+.++ .+..||+.+.+-...-.
T Consensus 113 ~~v~lw~~~~~~~~~~~~~---------~~~~~v~~v~~s~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~----- 173 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAET---------DESTYVASVKWSHDGSFLSVGLGNG-----LVDIYDVESQTKLRTMA----- 173 (401)
T ss_dssp TEEEEEETTTCCEEEEEEC---------CTTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEEC-----
T ss_pred CeEEEeeCCCCcEeEeeec---------CCCCCEEEEEECCCCCEEEEECCCC-----eEEEEECcCCeEEEEec-----
Confidence 3599999999887655432 11111122222 2566777776543 58899998876544331
Q ss_pred CcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe-CCEEEEEcccCCCCCcc
Q 013179 125 SPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIM 203 (448)
Q Consensus 125 ~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~ 203 (448)
.....-.+.... +.+++.|+.++ .+..||+.+..-...... .... .-.++... ++.+++.|+.++
T Consensus 174 ~~~~~v~~~~~~-~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~-~~~~--~v~~~~~~~~~~~l~s~~~d~----- 239 (401)
T 4aez_A 174 GHQARVGCLSWN-RHVLSSGSRSG-----AIHHHDVRIANHQIGTLQ-GHSS--EVCGLAWRSDGLQLASGGNDN----- 239 (401)
T ss_dssp CCSSCEEEEEEE-TTEEEEEETTS-----EEEEEETTSSSCEEEEEE-CCSS--CEEEEEECTTSSEEEEEETTS-----
T ss_pred CCCCceEEEEEC-CCEEEEEcCCC-----CEEEEecccCcceeeEEc-CCCC--CeeEEEEcCCCCEEEEEeCCC-----
Confidence 111112223333 35666776543 478888874332111100 1111 11122222 566777777543
Q ss_pred CceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE--eCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEE
Q 013179 204 GDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR 281 (448)
Q Consensus 204 ~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 281 (448)
.+..||..+..-...-. ....+ -.+++. .+..+++.||...+ ..+.+||+.+.+-..
T Consensus 240 -------~v~iwd~~~~~~~~~~~--~~~~~--v~~~~~~p~~~~ll~~~~gs~d----------~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 240 -------VVQIWDARSSIPKFTKT--NHNAA--VKAVAWCPWQSNLLATGGGTMD----------KQIHFWNAATGARVN 298 (401)
T ss_dssp -------CEEEEETTCSSEEEEEC--CCSSC--CCEEEECTTSTTEEEEECCTTT----------CEEEEEETTTCCEEE
T ss_pred -------eEEEccCCCCCccEEec--CCcce--EEEEEECCCCCCEEEEecCCCC----------CEEEEEECCCCCEEE
Confidence 23345666544322211 11111 123333 34567777753222 358899988765433
No 137
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=92.75 E-value=2.8 Score=39.15 Aligned_cols=109 Identities=15% Similarity=0.146 Sum_probs=56.2
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCCCcEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~~~~~~~ 107 (448)
.++..++.|+.++ .+.+||+.+++-...- ..........++.. ++.+++.|+.++ .+..+
T Consensus 149 pdg~~l~sgs~dg-----~v~iwd~~~~~~~~~~---------~~h~~~v~~v~~s~~~~~~~~s~~~dg-----~v~~w 209 (357)
T 4g56_B 149 SDGTQAVSGGKDF-----SVKVWDLSQKAVLKSY---------NAHSSEVNCVAACPGKDTIFLSCGEDG-----RILLW 209 (357)
T ss_dssp SSSSEEEEEETTS-----CEEEEETTTTEEEEEE---------CCCSSCEEEEEECTTCSSCEEEEETTS-----CEEEC
T ss_pred CCCCEEEEEeCCC-----eEEEEECCCCcEEEEE---------cCCCCCEEEEEEccCCCceeeeeccCC-----ceEEE
Confidence 4567777787643 4888999887643321 11111112222222 335777777553 37788
Q ss_pred ECCCCcEEEeecCCCCCCcCcccEEEEE--CCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 108 DTDIWQWSELTSFGDLPSPRDFAAASAI--GNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
|+.+.+-..... .........++.. .++.+++.|+.++ .+..||+.+.+
T Consensus 210 d~~~~~~~~~~~---~~~~~~~v~~v~~sp~~~~~la~g~~d~-----~i~~wd~~~~~ 260 (357)
T 4g56_B 210 DTRKPKPATRID---FCASDTIPTSVTWHPEKDDTFACGDETG-----NVSLVNIKNPD 260 (357)
T ss_dssp CTTSSSCBCBCC---CTTCCSCEEEEEECTTSTTEEEEEESSS-----CEEEEESSCGG
T ss_pred ECCCCceeeeee---eccccccccchhhhhcccceEEEeeccc-----ceeEEECCCCc
Confidence 887765322211 1111111222232 2346777776543 37888887654
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=92.69 E-value=5.6 Score=36.00 Aligned_cols=135 Identities=7% Similarity=-0.015 Sum_probs=70.1
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECC-eEEEEcccCCCCCCCcEEEEE
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDC-HMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~-~lyv~GG~~~~~~~~~~~~~d 108 (448)
.+.+|+....+ +.+.+||+.+++....... +.. ....++.-++ .+|+.+... ..++++|
T Consensus 9 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~---------~~~-~~~~~~s~dg~~l~~~~~~~-----~~i~~~d 68 (331)
T 3u4y_A 9 SNFGIVVEQHL-----RRISFFSTDTLEILNQITL---------GYD-FVDTAITSDCSNVVVTSDFC-----QTLVQIE 68 (331)
T ss_dssp CCEEEEEEGGG-----TEEEEEETTTCCEEEEEEC---------CCC-EEEEEECSSSCEEEEEESTT-----CEEEEEE
T ss_pred CCEEEEEecCC-----CeEEEEeCcccceeeeEEc---------cCC-cceEEEcCCCCEEEEEeCCC-----CeEEEEE
Confidence 46778777642 4699999999987554322 111 1122222244 577776532 3699999
Q ss_pred CCCCcE-EEeecCCCCCCcCcccEEEEECCc-EEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe
Q 013179 109 TDIWQW-SELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV 186 (448)
Q Consensus 109 ~~t~~W-~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~ 186 (448)
+.+++- ......+.. + .++++...++ .+| .+...+ ....++.||+.+.+-...-..+ ..-+.++..
T Consensus 69 ~~~~~~~~~~~~~~~~--~--~~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~~~~~~~~~~-----~~~~~~~~s 136 (331)
T 3u4y_A 69 TQLEPPKVVAIQEGQS--S--MADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKNKFISTIPIP-----YDAVGIAIS 136 (331)
T ss_dssp CSSSSCEEEEEEECSS--C--CCCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTTEEEEEEECC-----TTEEEEEEC
T ss_pred CCCCceeEEecccCCC--C--ccceEECCCCCEEE-EecCCC--CcccEEEEECCCCCeEEEEECC-----CCccceEEC
Confidence 998875 322221111 1 2223333333 566 432221 1126999999888765543111 111344444
Q ss_pred -CC-EEEEEccc
Q 013179 187 -EK-RLLIYGGR 196 (448)
Q Consensus 187 -~~-~lyv~GG~ 196 (448)
++ .+|+.+..
T Consensus 137 pdg~~l~~~~~~ 148 (331)
T 3u4y_A 137 PNGNGLILIDRS 148 (331)
T ss_dssp TTSSCEEEEEET
T ss_pred CCCCEEEEEecC
Confidence 33 57776543
No 139
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.58 E-value=6.4 Score=36.35 Aligned_cols=114 Identities=6% Similarity=-0.055 Sum_probs=54.4
Q ss_pred EEEEEcCCCCCc-ccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECC-eEEEEcccCCCCCCCcEEEEEC
Q 013179 32 KVVVFGGLVDKR-FLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDC-HMFIFGGRFGSRRLGDFWVLDT 109 (448)
Q Consensus 32 ~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~-~lyv~GG~~~~~~~~~~~~~d~ 109 (448)
..+++|.+.... .--.+|.+|..+++++.+... . ...-.+.++.-++ .||+.+........-.+|.+|.
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~--------~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~ 84 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-E--------VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDK 84 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-E--------CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEET
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-c--------CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeC
Confidence 445566664321 112366677888888776532 1 1111122222234 5666654321111123466677
Q ss_pred CCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCC
Q 013179 110 DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (448)
Q Consensus 110 ~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t 162 (448)
.+++.+.+.. .+..-.......+.++.+|+....+ ..+..|++.+
T Consensus 85 ~~g~~~~~~~---~~~~~~~p~~~~~dg~~l~~~~~~~-----~~v~~~~~~~ 129 (361)
T 3scy_A 85 EKGTLHLLNT---QKTMGADPCYLTTNGKNIVTANYSG-----GSITVFPIGQ 129 (361)
T ss_dssp TTTEEEEEEE---EECSSSCEEEEEECSSEEEEEETTT-----TEEEEEEBCT
T ss_pred CCCcEEEeeE---eccCCCCcEEEEECCCEEEEEECCC-----CEEEEEEeCC
Confidence 7788777653 2211111222223444677654321 3477888764
No 140
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=92.51 E-value=5.4 Score=35.38 Aligned_cols=182 Identities=4% Similarity=-0.035 Sum_probs=89.5
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCc-CcccEEEEE-CCcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSP-RDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~-r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
++++|+....+ ..+.+||+.......+...+..+.. ..-+..+.. .++.+|+.+.. ....+.+||....
T Consensus 40 ~g~l~v~~~~~-----~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~----~~~~i~~~d~~g~ 110 (286)
T 1q7f_A 40 QNDIIVADTNN-----HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS----PTHQIQIYNQYGQ 110 (286)
T ss_dssp TCCEEEEEGGG-----TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG----GGCEEEEECTTSC
T ss_pred CCCEEEEECCC-----CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC----CCCEEEEECCCCc
Confidence 46788875432 3588999885544444321111111 122333342 56789987632 1245889996544
Q ss_pred ceEeecCCCCCCCccCCceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE
Q 013179 164 EWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS 242 (448)
Q Consensus 164 ~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~ 242 (448)
.-..+.. +....-+.++.. ++++|+..... ..+..||+.......+...+.. ..-..+++
T Consensus 111 ~~~~~~~----~~~~~~~~i~~~~~g~l~v~~~~~------------~~i~~~~~~g~~~~~~~~~~~~---~~p~~i~~ 171 (286)
T 1q7f_A 111 FVRKFGA----TILQHPRGVTVDNKGRIIVVECKV------------MRVIIFDQNGNVLHKFGCSKHL---EFPNGVVV 171 (286)
T ss_dssp EEEEECT----TTCSCEEEEEECTTSCEEEEETTT------------TEEEEECTTSCEEEEEECTTTC---SSEEEEEE
T ss_pred EEEEecC----ccCCCceEEEEeCCCCEEEEECCC------------CEEEEEcCCCCEEEEeCCCCcc---CCcEEEEE
Confidence 4333421 111111233333 56788865421 2344557665544444321111 11234444
Q ss_pred -eCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEE-CCEEEEEccC
Q 013179 243 -GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGF 310 (448)
Q Consensus 243 -~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~i~v~GG~ 310 (448)
.++.+|+.... .+.+++||+.......+...+. ...-.+++.- ++++|+....
T Consensus 172 ~~~g~l~v~~~~------------~~~i~~~~~~g~~~~~~~~~g~---~~~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 172 NDKQEIFISDNR------------AHCVKVFNYEGQYLRQIGGEGI---TNYPIGVGINSNGEILIADNH 226 (286)
T ss_dssp CSSSEEEEEEGG------------GTEEEEEETTCCEEEEESCTTT---SCSEEEEEECTTCCEEEEECS
T ss_pred CCCCCEEEEECC------------CCEEEEEcCCCCEEEEEccCCc---cCCCcEEEECCCCCEEEEeCC
Confidence 35788887532 2468999987665555533211 1112233332 4678877643
No 141
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=92.28 E-value=2.4 Score=38.66 Aligned_cols=113 Identities=10% Similarity=0.024 Sum_probs=59.4
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEE-E--CCeEEEEcccCCCCCCCcEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-I--DCHMFIFGGRFGSRRLGDFW 105 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~-~--~~~lyv~GG~~~~~~~~~~~ 105 (448)
.++..++.|+.++ .+.+||+.++....+.... ...... .+++. . ++.+++.|+.++ .+.
T Consensus 23 ~~g~~lasgs~D~-----~v~lwd~~~~~~~~~~~l~-------gH~~~V-~~v~~~~~~~~~~l~s~s~D~-----~v~ 84 (316)
T 3bg1_A 23 YYGTRLATCSSDR-----SVKIFDVRNGGQILIADLR-------GHEGPV-WQVAWAHPMYGNILASCSYDR-----KVI 84 (316)
T ss_dssp GGGCEEEEEETTT-----EEEEEEEETTEEEEEEEEE-------CCSSCE-EEEEECCGGGSSCEEEEETTS-----CEE
T ss_pred CCCCEEEEEeCCC-----eEEEEEecCCCcEEEEEEc-------CCCccE-EEEEeCCCCCCCEEEEEECCC-----EEE
Confidence 4567888888653 4778888877543332211 111111 12222 1 256677777553 478
Q ss_pred EEECCCCcEEEeecCCCCCCcC-cccEEEEECC--cEEEEEecCCCCccCCceEEEeCCCC-ceEe
Q 013179 106 VLDTDIWQWSELTSFGDLPSPR-DFAAASAIGN--RKIVMYGGWDGKKWLSDVYVLDTISL-EWMQ 167 (448)
Q Consensus 106 ~~d~~t~~W~~~~~~~~~p~~r-~~~~~~~~~~--~~iyv~GG~~~~~~~~~v~~yd~~t~-~W~~ 167 (448)
.+|+.+.+|..+.. +.... .-.+++...+ +.+++.|+.++ .+..+|..+. .|..
T Consensus 85 iWd~~~~~~~~~~~---~~~h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 85 IWREENGTWEKSHE---HAGHDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTYTGEGQWEV 142 (316)
T ss_dssp EECCSSSCCCEEEE---ECCCSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEECSSSCEEE
T ss_pred EEECCCCcceEEEE---ccCCCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEecCCCCCcce
Confidence 88998877755442 11111 1122333222 46777777554 3667777654 4654
No 142
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=92.23 E-value=6.1 Score=35.32 Aligned_cols=107 Identities=13% Similarity=0.113 Sum_probs=51.5
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..++.|+.++ .+.++|..+++-..... .... ...+....+.+.+.|+..+ .+..++
T Consensus 77 ~~~~~l~sgs~Dg-----~v~iw~~~~~~~~~~~~---------~h~~--~~~~~~~~~~~l~s~~~~~-----~~~~~~ 135 (318)
T 4ggc_A 77 KEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMT---------SHSA--RVGSLSWNSYILSSGSRSG-----HIHHHD 135 (318)
T ss_dssp TTSSEEEEEETTS-----EEEEEETTTTEEEEEEE---------CCSS--CEEEEEEETTEEEEEETTS-----EEEEEE
T ss_pred CCCCEEEEEECCC-----cEEEeecCCceeEEEec---------Cccc--eEEEeecCCCEEEEEecCC-----ceEeee
Confidence 4456677776543 47778888876432211 1111 2223344555666665432 345555
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
..+......... . ............++..++.|+.++ .+..||..+.+
T Consensus 136 ~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~ 183 (318)
T 4ggc_A 136 VRVAEHHVATLS--G-HSQEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPGE 183 (318)
T ss_dssp TTSSSCEEEEEE--C-CSSCEEEEEECTTSSEEEEEETTS-----CEEEEESSCBT
T ss_pred cCCCceeEEEEc--C-ccCceEEEEEcCCCCEEEEEecCc-----ceeEEECCCCc
Confidence 555433322210 0 111112222334446666666543 36778877643
No 143
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=92.21 E-value=4.7 Score=37.55 Aligned_cols=216 Identities=10% Similarity=0.009 Sum_probs=102.9
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.+++.++|....++ ...+|.+|+.+++-..+... +.......+..-+++.+++.... ..++.+|
T Consensus 45 pDg~~l~~~~~~~g--~~~l~~~d~~~g~~~~lt~~---------~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~d 108 (388)
T 3pe7_A 45 RDGSKLLFGGAFDG--PWNYYLLDLNTQVATQLTEG---------RGDNTFGGFLSPDDDALFYVKDG-----RNLMRVD 108 (388)
T ss_dssp TTSCEEEEEECTTS--SCEEEEEETTTCEEEECCCS---------SCBCSSSCEECTTSSEEEEEETT-----TEEEEEE
T ss_pred CCCCEEEEEEcCCC--CceEEEEeCCCCceEEeeeC---------CCCCccceEEcCCCCEEEEEeCC-----CeEEEEE
Confidence 44555555553222 24699999999987776521 11111122333355444444322 3699999
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEE-ECCcEEEEEecCC-----------------CCccCCceEEEeCCCCceEeecC
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASA-IGNRKIVMYGGWD-----------------GKKWLSDVYVLDTISLEWMQLPV 170 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~-~~~~~iyv~GG~~-----------------~~~~~~~v~~yd~~t~~W~~~~~ 170 (448)
+.+++-..+.. .|.......... -.+++.++.--.. .......++.+|+.+.+-+.+..
T Consensus 109 ~~~g~~~~~~~---~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 185 (388)
T 3pe7_A 109 LATLEENVVYQ---VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ 185 (388)
T ss_dssp TTTCCEEEEEE---CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE
T ss_pred CCCCcceeeee---chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec
Confidence 99988766653 343322222222 2333333311000 01123579999999887766641
Q ss_pred CCCCCCccCCceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eCCE-E
Q 013179 171 TGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHY-L 247 (448)
Q Consensus 171 ~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~-i 247 (448)
.+ ....+....- +++.+++............+|. +|+++.....+.. .+.......... -+++ |
T Consensus 186 ---~~-~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~------~d~~~~~~~~l~~---~~~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 186 ---EN-QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWL------INEDGTNMRKVKT---HAEGESCTHEFWVPDGSAL 252 (388)
T ss_dssp ---ES-SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEE------EETTSCCCEESCC---CCTTEEEEEEEECTTSSCE
T ss_pred ---CC-ccccccEECCCCCCEEEEEEecCCCCCcceEEE------EeCCCCceEEeee---CCCCcccccceECCCCCEE
Confidence 11 1122222222 3454444433221111233444 4777776666642 111111112222 2443 4
Q ss_pred EEEcCCCCCCCcccccceeCcEEEEEcCCCceEEecc
Q 013179 248 LLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPI 284 (448)
Q Consensus 248 ~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 284 (448)
+........ ....++++|+.+.+-+.+..
T Consensus 253 ~~~~~~~~~--------~~~~l~~~d~~~g~~~~l~~ 281 (388)
T 3pe7_A 253 VYVSYLKGS--------PDRFIYSADPETLENRQLTS 281 (388)
T ss_dssp EEEEEETTC--------CCEEEEEECTTTCCEEEEEE
T ss_pred EEEecCCCC--------CcceEEEEecCCCceEEEEc
Confidence 443322111 11249999999888766644
No 144
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=92.13 E-value=6.3 Score=35.31 Aligned_cols=117 Identities=9% Similarity=0.041 Sum_probs=59.8
Q ss_pred EEEECC-cEEEEEcCCCCCcccCceEEEEcCCCcEEee-eecCCCCCCCCCCCCCcceeEEE-ECCeEEEEcccCC----
Q 013179 25 AVNIGK-SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQP-ECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFG---- 97 (448)
Q Consensus 25 ~~~~~~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~~~~~~~p~~R~~h~~~~-~~~~lyv~GG~~~---- 97 (448)
++...+ +.+|+.... +.+++||+. ++...+ ..... ..+..+. +.++. -++++|+......
T Consensus 76 i~~~~~~g~l~v~~~~------~~l~~~d~~-g~~~~~~~~~~~-----~~~~~~~-~~i~~d~~g~l~v~~~~~~~~~~ 142 (314)
T 1pjx_A 76 CQCDRDANQLFVADMR------LGLLVVQTD-GTFEEIAKKDSE-----GRRMQGC-NDCAFDYEGNLWITAPAGEVAPA 142 (314)
T ss_dssp EEECSSSSEEEEEETT------TEEEEEETT-SCEEECCSBCTT-----SCBCBCC-CEEEECTTSCEEEEECBCBCTTS
T ss_pred EEEecCCCcEEEEECC------CCEEEEeCC-CCEEEEEeccCC-----CccccCC-cCEEECCCCCEEEEecCcccccc
Confidence 333455 778876542 258999998 776654 32110 1111112 23333 3567887654221
Q ss_pred ------CCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEE----CCc-EEEEEecCCCCccCCceEEEeCC-CCce
Q 013179 98 ------SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI----GNR-KIVMYGGWDGKKWLSDVYVLDTI-SLEW 165 (448)
Q Consensus 98 ------~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~----~~~-~iyv~GG~~~~~~~~~v~~yd~~-t~~W 165 (448)
......++++|+. .+...+... .. .....+.. .++ .+|+.... .+.+++||+. +.+.
T Consensus 143 ~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~---~~~~i~~~~~~d~dg~~l~v~~~~-----~~~i~~~~~~~~g~~ 211 (314)
T 1pjx_A 143 DYTRSMQEKFGSIYCFTTD-GQMIQVDTA--FQ---FPNGIAVRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAKI 211 (314)
T ss_dssp CCCBTTSSSCEEEEEECTT-SCEEEEEEE--ES---SEEEEEEEECTTSCEEEEEEEETT-----TTEEEEEEEEETTEE
T ss_pred cccccccCCCCeEEEECCC-CCEEEeccC--CC---CcceEEEecccCCCCCEEEEEECC-----CCeEEEEECCCCCcc
Confidence 1112468999987 666554321 11 11233444 555 56776432 2458888876 4443
No 145
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.10 E-value=6.8 Score=36.40 Aligned_cols=27 Identities=11% Similarity=0.036 Sum_probs=17.5
Q ss_pred ECCcEEEEEecCCCCccCCceEEEeCCCCceE
Q 013179 135 IGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (448)
Q Consensus 135 ~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (448)
..++..++.|+.++ .+..||+.+.+-.
T Consensus 254 ~~~~~~l~~~~~dg-----~i~vwd~~~~~~~ 280 (408)
T 4a11_B 254 TSDGLHLLTVGTDN-----RMRLWNSSNGENT 280 (408)
T ss_dssp CTTSSEEEEEETTS-----CEEEEETTTCCBC
T ss_pred cCCCCEEEEecCCC-----eEEEEECCCCccc
Confidence 34556677776543 4888998876543
No 146
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=92.06 E-value=7 Score=35.63 Aligned_cols=211 Identities=9% Similarity=-0.089 Sum_probs=103.3
Q ss_pred EEEEEC-CcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE--CCeEEEEcccCC---
Q 013179 24 SAVNIG-KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFG--- 97 (448)
Q Consensus 24 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv~GG~~~--- 97 (448)
.+++.. ++.|||.-.. ..+.+||+.++..+.+..... ..+. ..-..+++. ++.||+.-....
T Consensus 84 gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~~~~~~~~~-----~~~~-~~p~~i~~d~~~G~l~v~d~~~~~~~ 151 (322)
T 2fp8_A 84 DISYNLQNNQLYIVDCY------YHLSVVGSEGGHATQLATSVD-----GVPF-KWLYAVTVDQRTGIVYFTDVSTLYDD 151 (322)
T ss_dssp EEEEETTTTEEEEEETT------TEEEEECTTCEECEEEESEET-----TEEC-SCEEEEEECTTTCCEEEEESCSSCCT
T ss_pred eEEEcCCCCcEEEEECC------CCEEEEeCCCCEEEEecccCC-----CCcc-cccceEEEecCCCEEEEECCcccccc
Confidence 444453 6788887432 238889988776555532110 0111 122333343 468888632210
Q ss_pred ---------CCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCc-EEEEEecCCCCccCCceEEEeCCC---Cc
Q 013179 98 ---------SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTIS---LE 164 (448)
Q Consensus 98 ---------~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t---~~ 164 (448)
......+++||+.+.+...+... + ..-...+...++ .||+.-. ..+.+++|++.. .+
T Consensus 152 ~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~---~~p~gia~~~dg~~lyv~d~-----~~~~I~~~~~~~~~~~~ 221 (322)
T 2fp8_A 152 RGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE--L---HVPGGAEVSADSSFVLVAEF-----LSHQIVKYWLEGPKKGT 221 (322)
T ss_dssp TCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE--E---SCCCEEEECTTSSEEEEEEG-----GGTEEEEEESSSTTTTC
T ss_pred cccceehcccCCCceEEEEeCCCCEEEEeccC--C---ccCcceEECCCCCEEEEEeC-----CCCeEEEEECCCCcCCc
Confidence 01224699999998876655321 1 111233444443 5887632 135689999875 23
Q ss_pred eEeecCCCCCCCccCCceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEe
Q 013179 165 WMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG 243 (448)
Q Consensus 165 W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~ 243 (448)
.+.+. ..+.| ..++.. ++.|||......... ...-.-..+.+||+....-..+..+...+ ...-.+++..
T Consensus 222 ~~~~~---~~~gP---~gi~~d~~G~l~va~~~~~~~~--~~~~~~~~v~~~d~~G~~~~~~~~~~g~~-~~~~~~~~~~ 292 (322)
T 2fp8_A 222 AEVLV---KIPNP---GNIKRNADGHFWVSSSEELDGN--MHGRVDPKGIKFDEFGNILEVIPLPPPFA-GEHFEQIQEH 292 (322)
T ss_dssp EEEEE---ECSSE---EEEEECTTSCEEEEEEEETTSS--TTSCEEEEEEEECTTSCEEEEEECCTTTT-TSCCCEEEEE
T ss_pred cceEE---eCCCC---CCeEECCCCCEEEEecCccccc--ccCCCccEEEEECCCCCEEEEEECCCCCc-cccceEEEEe
Confidence 44333 12221 122232 467888754311000 00000134566788766555555321111 1222244456
Q ss_pred CCEEEEEcCCCCCCCcccccceeCcEEEEEcCCC
Q 013179 244 GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSA 277 (448)
Q Consensus 244 ~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 277 (448)
+++|||..... +.|.+|++..+
T Consensus 293 ~g~L~v~~~~~------------~~i~~~~~~~~ 314 (322)
T 2fp8_A 293 DGLLYIGTLFH------------GSVGILVYDKK 314 (322)
T ss_dssp TTEEEEECSSC------------SEEEEEEC---
T ss_pred CCEEEEeecCC------------CceEEEecccc
Confidence 88999875322 46888887543
No 147
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=92.01 E-value=3.4 Score=38.40 Aligned_cols=112 Identities=17% Similarity=0.091 Sum_probs=49.5
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCc-EEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKL-WFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~ 107 (448)
.++..++.|+.++ .+.+||+.++. |....... .........+..-++++++.|+.++ .+..+
T Consensus 65 ~~~~~l~s~s~d~-----~v~vwd~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iw 127 (377)
T 3dwl_C 65 PKSNRIVTCSQDR-----NAYVYEKRPDGTWKQTLVLL-------RLNRAATFVRWSPNEDKFAVGSGAR-----VISVC 127 (377)
T ss_dssp TTTCCEEEEETTS-----SEEEC------CCCCEEECC-------CCSSCEEEEECCTTSSCCEEEESSS-----CEEEC
T ss_pred CCCCEEEEEeCCC-----eEEEEEcCCCCceeeeeEec-------ccCCceEEEEECCCCCEEEEEecCC-----eEEEE
Confidence 4566777777543 48888888876 54433221 1111111111122556677776543 37777
Q ss_pred ECCCCc-EEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 108 DTDIWQ-WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 108 d~~t~~-W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
|+.+.+ |..+... ..+....-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 128 d~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~ 178 (377)
T 3dwl_C 128 YFEQENDWWVSKHL-KRPLRSTILSLDWHPNNVLLAAGCADR-----KAYVLSAYVR 178 (377)
T ss_dssp CC-----CCCCEEE-CSSCCSCEEEEEECTTSSEEEEEESSS-----CEEEEEECCS
T ss_pred EECCcccceeeeEe-ecccCCCeEEEEEcCCCCEEEEEeCCC-----EEEEEEEEec
Confidence 777664 3222210 011112223333345567777777553 3777887543
No 148
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=91.74 E-value=8.4 Score=42.51 Aligned_cols=110 Identities=9% Similarity=-0.011 Sum_probs=60.3
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..++.||.++ .+.+||..+++-...- . .........++.-++++++.|+.++ .+.++|
T Consensus 625 ~~~~~l~s~~~d~-----~i~vw~~~~~~~~~~~-~--------~h~~~v~~~~~s~~~~~l~s~~~d~-----~v~vwd 685 (1249)
T 3sfz_A 625 QDGQRIASCGADK-----TLQVFKAETGEKLLDI-K--------AHEDEVLCCAFSSDDSYIATCSADK-----KVKIWD 685 (1249)
T ss_dssp TTSSEEEEEETTS-----CEEEEETTTCCEEEEE-C--------CCSSCEEEEEECTTSSEEEEEETTS-----EEEEEE
T ss_pred CCCCEEEEEeCCC-----eEEEEECCCCCEEEEe-c--------cCCCCEEEEEEecCCCEEEEEeCCC-----eEEEEE
Confidence 5577778887543 4889999887643221 1 1111222222223566777776543 489999
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEEE-C--CcEEEEEecCCCCccCCceEEEeCCCCceEe
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASAI-G--NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ 167 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~-~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~ 167 (448)
..+++-...-. .....-.++.. . ++.+++.|+.++ .+..||+.+.+-..
T Consensus 686 ~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~sg~~d~-----~v~vwd~~~~~~~~ 737 (1249)
T 3sfz_A 686 SATGKLVHTYD-----EHSEQVNCCHFTNKSNHLLLATGSNDF-----FLKLWDLNQKECRN 737 (1249)
T ss_dssp TTTCCEEEEEE-----CCSSCEEEEEECSSSSCCEEEEEETTS-----CEEEEETTSSSEEE
T ss_pred CCCCceEEEEc-----CCCCcEEEEEEecCCCceEEEEEeCCC-----eEEEEECCCcchhh
Confidence 98887544332 11111222222 2 334666666443 37889988776443
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=91.03 E-value=8.8 Score=34.78 Aligned_cols=116 Identities=11% Similarity=0.131 Sum_probs=59.2
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEE-ECC-eEEEEcccCCCCCCCcEEEE
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDC-HMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~-~~~-~lyv~GG~~~~~~~~~~~~~ 107 (448)
++.+|+.++.+ +.++++|+.+++....-.. +....-+..+. -++ .+|+.+... ..++++
T Consensus 10 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~---------~~~~~~~~~~~s~dg~~~~v~~~~~-----~~i~~~ 70 (349)
T 1jmx_B 10 GHEYMIVTNYP-----NNLHVVDVASDTVYKSCVM---------PDKFGPGTAMMAPDNRTAYVLNNHY-----GDIYGI 70 (349)
T ss_dssp TCEEEEEEETT-----TEEEEEETTTTEEEEEEEC---------SSCCSSCEEEECTTSSEEEEEETTT-----TEEEEE
T ss_pred CCEEEEEeCCC-----CeEEEEECCCCcEEEEEec---------CCCCCCceeEECCCCCEEEEEeCCC-----CcEEEE
Confidence 36677777642 4699999999875433211 11001223332 233 577776422 359999
Q ss_pred ECCCCcEEEeecCCCCCC--cCcccEEEEECCc-EEEEEecC---CCC---ccCCceEEEeCCCCc
Q 013179 108 DTDIWQWSELTSFGDLPS--PRDFAAASAIGNR-KIVMYGGW---DGK---KWLSDVYVLDTISLE 164 (448)
Q Consensus 108 d~~t~~W~~~~~~~~~p~--~r~~~~~~~~~~~-~iyv~GG~---~~~---~~~~~v~~yd~~t~~ 164 (448)
|+.+++-......+..|. ...-+.++...++ .+|+.+.. ... .....++.||+.+++
T Consensus 71 d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 71 DLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp ETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred eCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 999887654332111111 1112334444444 45554421 000 012568999988744
No 150
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=90.99 E-value=8.8 Score=34.71 Aligned_cols=105 Identities=14% Similarity=0.187 Sum_probs=56.9
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCc----EEeeeecCCCCCCCCCCCCCcceeEEEECCe-EEEEcccCCCCCCCc
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKL----WFQPECTGNGSNGQVGPGPRAFHIAVAIDCH-MFIFGGRFGSRRLGD 103 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~----W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~-lyv~GG~~~~~~~~~ 103 (448)
.++..++.|+.+ ..+.+||+.+.. -..+.. ........+..-+++ +++.|+.++ .
T Consensus 21 ~~~~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~l~~~~~dg-----~ 80 (342)
T 1yfq_A 21 PSKSLLLITSWD-----GSLTVYKFDIQAKNVDLLQSLR----------YKHPLLCCNFIDNTDLQIYVGTVQG-----E 80 (342)
T ss_dssp GGGTEEEEEETT-----SEEEEEEEETTTTEEEEEEEEE----------CSSCEEEEEEEESSSEEEEEEETTS-----C
T ss_pred CCCCEEEEEcCC-----CeEEEEEeCCCCccccceeeee----------cCCceEEEEECCCCCcEEEEEcCCC-----e
Confidence 446677777754 347888887765 333221 112222233333667 777777543 5
Q ss_pred EEEEEC-CCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCC
Q 013179 104 FWVLDT-DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (448)
Q Consensus 104 ~~~~d~-~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t 162 (448)
+..||+ .+.+-..+.. .+....-.+++... +.+++.|+.++ .+..||+.+
T Consensus 81 i~~wd~~~~~~~~~~~~---~~~~~~v~~l~~~~-~~~l~s~~~d~-----~i~iwd~~~ 131 (342)
T 1yfq_A 81 ILKVDLIGSPSFQALTN---NEANLGICRICKYG-DDKLIAASWDG-----LIEVIDPRN 131 (342)
T ss_dssp EEEECSSSSSSEEECBS---CCCCSCEEEEEEET-TTEEEEEETTS-----EEEEECHHH
T ss_pred EEEEEeccCCceEeccc---cCCCCceEEEEeCC-CCEEEEEcCCC-----eEEEEcccc
Confidence 899999 8887655542 00111222333334 45666666543 367777654
No 151
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=90.92 E-value=6 Score=39.49 Aligned_cols=106 Identities=12% Similarity=-0.010 Sum_probs=57.1
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE--CCeEEEEcccCCCCCCCcEEEE
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv~GG~~~~~~~~~~~~~ 107 (448)
++.+|+.+..+ +.+.++|..+++-...- +....-|.++.. +..||+.+. . +.+.+|
T Consensus 148 ~~~~~vs~~~d-----~~V~v~D~~t~~~~~~i-----------~~g~~~~~v~~spdg~~l~v~~~-d-----~~V~v~ 205 (543)
T 1nir_A 148 PNLFSVTLRDA-----GQIALVDGDSKKIVKVI-----------DTGYAVHISRMSASGRYLLVIGR-D-----ARIDMI 205 (543)
T ss_dssp GGEEEEEEGGG-----TEEEEEETTTCCEEEEE-----------ECSTTEEEEEECTTSCEEEEEET-T-----SEEEEE
T ss_pred CCEEEEEEcCC-----CeEEEEECCCceEEEEE-----------ecCcccceEEECCCCCEEEEECC-C-----CeEEEE
Confidence 46788876542 45888999988653321 111114544332 345666653 2 569999
Q ss_pred EC--CCCcEEEeecCCCCCCcCcccEEEEEC----Cc-EEEEEecCCCCccCCceEEEeCCCCceEe
Q 013179 108 DT--DIWQWSELTSFGDLPSPRDFAAASAIG----NR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQ 167 (448)
Q Consensus 108 d~--~t~~W~~~~~~~~~p~~r~~~~~~~~~----~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~ 167 (448)
|+ .+.+-... ++....-..++... ++ .+|+. ... -+.+..+|..+.+-.+
T Consensus 206 D~~~~t~~~~~~-----i~~g~~p~~va~sp~~~~dg~~l~v~-~~~----~~~v~v~D~~t~~~~~ 262 (543)
T 1nir_A 206 DLWAKEPTKVAE-----IKIGIEARSVESSKFKGYEDRYTIAG-AYW----PPQFAIMDGETLEPKQ 262 (543)
T ss_dssp ETTSSSCEEEEE-----EECCSEEEEEEECCSTTCTTTEEEEE-EEE----SSEEEEEETTTCCEEE
T ss_pred ECcCCCCcEEEE-----EecCCCcceEEeCCCcCCCCCEEEEE-Ecc----CCeEEEEeccccccce
Confidence 99 66654322 22222223333433 44 55554 321 2457888988766443
No 152
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=90.74 E-value=12 Score=37.62 Aligned_cols=164 Identities=14% Similarity=0.137 Sum_probs=82.0
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCC--------CCcCcccEEEEECCcEEEEEecCCCCccCCceEE
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL--------PSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYV 157 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~--------p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~ 157 (448)
+..+|+..-. .+.+.++|..+.+=...-+.+.+ |.+|... .+...++..+++-= .....++.
T Consensus 255 Gk~l~v~n~~-----~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~-i~~s~~~~~~vv~~----~~~g~v~~ 324 (567)
T 1qks_A 255 DKYAIAGAYW-----PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAA-ILASHYRPEFIVNV----KETGKILL 324 (567)
T ss_dssp TTEEEEEEEE-----TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEE-EEECSSSSEEEEEE----TTTTEEEE
T ss_pred CCEEEEEEcc-----CCeEEEEECCCCcEEEEEeccccccccccccCCCceEE-EEEcCCCCEEEEEe----cCCCeEEE
Confidence 4467776432 24578899888765443322211 2233222 11122223333321 12345788
Q ss_pred EeCCCCceEeecCCCCCCCccCCceeEEe-C-CEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCC-CCCCCC
Q 013179 158 LDTISLEWMQLPVTGSVPPPRCGHTATMV-E-KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLP-GQAPSS 234 (448)
Q Consensus 158 yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~-g~~p~~ 234 (448)
.|........+. .++..+.-|..... + .++|+..... +.+..+|.++.+-...-.. |..|.+
T Consensus 325 vd~~~~~~~~v~---~i~~~~~~~d~~~~pdgr~~~va~~~s------------n~V~ViD~~t~kl~~~i~vgg~~Php 389 (567)
T 1qks_A 325 VDYTDLNNLKTT---EISAERFLHDGGLDGSHRYFITAANAR------------NKLVVIDTKEGKLVAIEDTGGQTPHP 389 (567)
T ss_dssp EETTCSSEEEEE---EEECCSSEEEEEECTTSCEEEEEEGGG------------TEEEEEETTTTEEEEEEECSSSSBCC
T ss_pred EecCCCccceee---eeeccccccCceECCCCCEEEEEeCCC------------CeEEEEECCCCcEEEEEeccCcCCCC
Confidence 887766554444 33445555555544 2 3444443221 3345568888775443333 455655
Q ss_pred CceeEEEEe-CCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCc-----eEEeccC
Q 013179 235 RCGHTITSG-GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ-----WKRLPIG 285 (448)
Q Consensus 235 r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~-----W~~~~~~ 285 (448)
..+.....- .+.+|+.+-... +.|-++|..+.. |+.+...
T Consensus 390 g~g~~~~~p~~g~v~~t~~~g~-----------~~Vsvid~~~~~~~~~~~kvv~~i 435 (567)
T 1qks_A 390 GRGANFVHPTFGPVWATSHMGD-----------DSVALIGTDPEGHPDNAWKILDSF 435 (567)
T ss_dssp TTCEEEEETTTEEEEEEEBSSS-----------SEEEEEECCTTTCTTTBTSEEEEE
T ss_pred ccceeeECCCCCcEEEeCCCCC-----------CeEEEecCCCCCCccccCEEEEEE
Confidence 444333222 357777653322 357788876632 7766553
No 153
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=90.72 E-value=11 Score=35.39 Aligned_cols=109 Identities=16% Similarity=0.117 Sum_probs=60.5
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.+++.++.|+.++ .+.+||+.+++-...- . .........+..-++..++.|+.++ .+..+|
T Consensus 133 ~dg~~l~s~~~d~-----~i~iwd~~~~~~~~~~-~--------~h~~~v~~~~~~p~~~~l~s~s~d~-----~v~iwd 193 (393)
T 1erj_A 133 PDGKFLATGAEDR-----LIRIWDIENRKIVMIL-Q--------GHEQDIYSLDYFPSGDKLVSGSGDR-----TVRIWD 193 (393)
T ss_dssp TTSSEEEEEETTS-----CEEEEETTTTEEEEEE-C--------CCSSCEEEEEECTTSSEEEEEETTS-----EEEEEE
T ss_pred CCCCEEEEEcCCC-----eEEEEECCCCcEEEEE-c--------cCCCCEEEEEEcCCCCEEEEecCCC-----cEEEEE
Confidence 4577788887643 4888999887643321 1 1111111112222455666666543 488889
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEEEC-CcEEEEEecCCCCccCCceEEEeCCCCceE
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (448)
+.+++...... .. ....+++... ++.+++.|+.++ .+..||+.+..-.
T Consensus 194 ~~~~~~~~~~~---~~--~~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~~~~ 242 (393)
T 1erj_A 194 LRTGQCSLTLS---IE--DGVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGFLV 242 (393)
T ss_dssp TTTTEEEEEEE---CS--SCEEEEEECSTTCCEEEEEETTS-----CEEEEETTTCCEE
T ss_pred CCCCeeEEEEE---cC--CCcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcEE
Confidence 98887544332 11 1112222222 567888887654 3788888776543
No 154
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=90.65 E-value=5 Score=36.73 Aligned_cols=74 Identities=5% Similarity=-0.032 Sum_probs=39.3
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCC--CcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDN--KLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWV 106 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~--~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~ 106 (448)
.++..++.|+.++ .+.++|+.. ..+..+.... .........+..-++.+++.|+.++ .+..
T Consensus 117 p~g~~las~s~D~-----~v~iwd~~~~~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~l~s~s~D~-----~i~i 179 (330)
T 2hes_X 117 NDGYYLATCSRDK-----SVWIWETDESGEEYECISVLQ-------EHSQDVKHVIWHPSEALLASSSYDD-----TVRI 179 (330)
T ss_dssp TTSCEEEEEETTS-----CEEEEECCTTCCCCEEEEEEC-------CCSSCEEEEEECSSSSEEEEEETTS-----CEEE
T ss_pred CCCCEEEEEeCCC-----EEEEEeccCCCCCeEEEEEec-------cCCCceEEEEECCCCCEEEEEcCCC-----eEEE
Confidence 4466777777543 477888743 2344433221 1111111112222566777777654 3777
Q ss_pred EECCCCcEEEeec
Q 013179 107 LDTDIWQWSELTS 119 (448)
Q Consensus 107 ~d~~t~~W~~~~~ 119 (448)
+|..+..|..+..
T Consensus 180 W~~~~~~~~~~~~ 192 (330)
T 2hes_X 180 WKDYDDDWECVAV 192 (330)
T ss_dssp EEEETTEEEEEEE
T ss_pred EECCCCCeeEEEE
Confidence 7877777766553
No 155
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=90.62 E-value=17 Score=37.31 Aligned_cols=125 Identities=14% Similarity=0.077 Sum_probs=66.0
Q ss_pred ECCcEEEEEcCCCCCcccCceEEEEcCCCc--EEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEE
Q 013179 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKL--WFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFW 105 (448)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~ 105 (448)
+.+++||+... ...++.+|..+++ |+.-...... ............+.++.+++||+... ...++
T Consensus 64 v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l~ 130 (668)
T 1kv9_A 64 FHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKV-KARTSCCDAVNRGVALWGDKVYVGTL------DGRLI 130 (668)
T ss_dssp EETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGG-GGGGCTTCSCCCCCEEEBTEEEEECT------TSEEE
T ss_pred EECCEEEEECC------CCeEEEEECCCChhceEECCCCCcc-ccccccccCCccceEEECCEEEEEcC------CCEEE
Confidence 33488888764 2459999998874 8764311000 00000000011233556788887642 13599
Q ss_pred EEECCCCc--EEEeecCCCCCC-cCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc--eEee
Q 013179 106 VLDTDIWQ--WSELTSFGDLPS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQL 168 (448)
Q Consensus 106 ~~d~~t~~--W~~~~~~~~~p~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~ 168 (448)
.+|..|++ |+.-.. +.+. .....+.++. ++.+|+..+.........++.||..+++ |+.-
T Consensus 131 alD~~tG~~~W~~~~~--~~~~~~~~~~~P~v~-~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 131 ALDAKTGKAIWSQQTT--DPAKPYSITGAPRVV-KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEETTTCCEEEEEECS--CTTSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEECCCCCEeeeeccC--CCCCcceecCCCEEE-CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 99998875 876442 1111 1112223344 4577764322111223569999998765 8764
No 156
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=90.55 E-value=9.5 Score=34.38 Aligned_cols=163 Identities=7% Similarity=-0.058 Sum_probs=74.4
Q ss_pred CeEEEEcccCCCCCCCcEEEEECCC-CcEEEee--cCCCCCCcCcccEEEEECCc-EEEEEecCCCCccCCceEEEeCC-
Q 013179 87 CHMFIFGGRFGSRRLGDFWVLDTDI-WQWSELT--SFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTI- 161 (448)
Q Consensus 87 ~~lyv~GG~~~~~~~~~~~~~d~~t-~~W~~~~--~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~- 161 (448)
..||+.+... ..+.+||+.+ .+...+. .. ..+....-..++...++ .+|+.+..+ +.+..||+.
T Consensus 141 ~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~pdg~~l~~~~~~~-----~~i~~~~~~~ 209 (343)
T 1ri6_A 141 RTLWVPALKQ-----DRICLFTVSDDGHLVAQDPAEV-TTVEGAGPRHMVFHPNEQYAYCVNELN-----SSVDVWELKD 209 (343)
T ss_dssp SEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEEE-ECSTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEESSC
T ss_pred CEEEEecCCC-----CEEEEEEecCCCceeeeccccc-ccCCCCCcceEEECCCCCEEEEEeCCC-----CEEEEEEecC
Confidence 4577665322 3588999987 6665432 10 12222111223333344 577765332 357888874
Q ss_pred -CCceEeecCCCCCCCc---cCCc-eeEEe--CCEEEEEcccCCCCCccCceeeecccccccCC--CCceEEecCCCCCC
Q 013179 162 -SLEWMQLPVTGSVPPP---RCGH-TATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENE--TPGWTQLKLPGQAP 232 (448)
Q Consensus 162 -t~~W~~~~~~~~~p~~---r~~~-~~~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~--~~~W~~~~~~g~~p 232 (448)
+.++..+......+.. .... .++.. ++.||+.+... ..+..||+. +.+++.+.. .+
T Consensus 210 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~------------~~i~v~d~~~~~~~~~~~~~---~~ 274 (343)
T 1ri6_A 210 PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA------------SLITVFSVSEDGSVLSKEGF---QP 274 (343)
T ss_dssp TTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT------------TEEEEEEECTTSCCEEEEEE---EE
T ss_pred CCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC------------CEEEEEEEcCCCCceEEeee---ec
Confidence 4555433211122221 1111 23333 23666655322 223344554 555555431 11
Q ss_pred CCCceeEEEE--eCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEeccC
Q 013179 233 SSRCGHTITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIG 285 (448)
Q Consensus 233 ~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~ 285 (448)
....-..++. .+..||+.+..+. .-.+|.+|+.+.+++.+...
T Consensus 275 ~~~~~~~~~~s~dg~~l~~~~~~~~----------~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 275 TETQPRGFNVDHSGKYLIAAGQKSH----------HISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp CSSSCCCEEECTTSSEEEEECTTTC----------EEEEEEEETTTTEEEEEEEE
T ss_pred CCCccceEEECCCCCEEEEecCCCC----------eEEEEEEcCCCceeeEcccc
Confidence 1111123333 2345666553221 12366668888888877653
No 157
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=90.51 E-value=6.8 Score=36.82 Aligned_cols=111 Identities=14% Similarity=-0.010 Sum_probs=58.7
Q ss_pred EEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEE-ECCeEEEEcccCCCCCCCcEEEEECC
Q 013179 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLDTD 110 (448)
Q Consensus 32 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~ 110 (448)
.+++.|+.++ .+.+||+.+++....-... ... ..-.+++. -++.+++.|+.+ ..+.+||+.
T Consensus 145 ~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~-------~~~-~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~ 206 (402)
T 2aq5_A 145 NVLLSAGCDN-----VILVWDVGTGAAVLTLGPD-------VHP-DTIYSVDWSRDGALICTSCRD-----KRVRVIEPR 206 (402)
T ss_dssp TEEEEEETTS-----CEEEEETTTTEEEEEECTT-------TCC-SCEEEEEECTTSSCEEEEETT-----SEEEEEETT
T ss_pred CEEEEEcCCC-----EEEEEECCCCCccEEEecC-------CCC-CceEEEEECCCCCEEEEEecC-----CcEEEEeCC
Confidence 4777777543 4889999988653321000 011 11122222 256667777654 358999998
Q ss_pred CCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 111 IWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 111 t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
+.+-..... ..........++...++.+++.|.... .-..+..||+.+..
T Consensus 207 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~g~~~~--~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 207 KGTVVAEKD--RPHEGTRPVHAVFVSEGKILTTGFSRM--SERQVALWDTKHLE 256 (402)
T ss_dssp TTEEEEEEE--CSSCSSSCCEEEECSTTEEEEEEECTT--CCEEEEEEETTBCS
T ss_pred CCceeeeec--cCCCCCcceEEEEcCCCcEEEEeccCC--CCceEEEEcCcccc
Confidence 876543321 011111223344445668777773111 12358889987644
No 158
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=90.51 E-value=9 Score=34.42 Aligned_cols=176 Identities=10% Similarity=-0.028 Sum_probs=83.4
Q ss_pred CceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCC------CCCCCcEEEEECCCCcEEEeec
Q 013179 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFG------SRRLGDFWVLDTDIWQWSELTS 119 (448)
Q Consensus 46 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~------~~~~~~~~~~d~~t~~W~~~~~ 119 (448)
+.+++||+.+++++.+..... ..+..|....++.-++++|+-.-... ......++++|+.. +...+..
T Consensus 73 ~~l~~~d~~~g~~~~~~~~~~-----~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~ 146 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVLATVDN-----DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFD 146 (297)
T ss_dssp TEEEEEETTTTEEEEEEECCT-----TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEE
T ss_pred CeEEEEECCCCcEEEEEecCC-----CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEee
Confidence 458999999999887764321 11222333333333567776421111 11234689998863 3333332
Q ss_pred CCCCCCcCcccEEEEECCc-EEEEEecCCCCccCCceEEEeC--CCCceEeecCCCCCCCc-cCCceeEEe-CCEEEEEc
Q 013179 120 FGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDT--ISLEWMQLPVTGSVPPP-RCGHTATMV-EKRLLIYG 194 (448)
Q Consensus 120 ~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~--~t~~W~~~~~~~~~p~~-r~~~~~~~~-~~~lyv~G 194 (448)
.+. .-...+...++ .+|+.... .+.+++||. .+............+.. ..-..++.. ++.||+..
T Consensus 147 --~~~---~pngi~~spdg~~lyv~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~ 216 (297)
T 3g4e_A 147 --QVD---ISNGLDWSLDHKIFYYIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVAC 216 (297)
T ss_dssp --EES---BEEEEEECTTSCEEEEEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEE
T ss_pred --ccc---cccceEEcCCCCEEEEecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 111 11233333343 67877532 245788875 45443211100011110 111123332 56788764
Q ss_pred ccCCCCCccCceeeecccccccCCCCceE-EecCCCCCCCCCceeEEEEe---CCEEEEEcCCC
Q 013179 195 GRGGGGPIMGDLWALKGLIEEENETPGWT-QLKLPGQAPSSRCGHTITSG---GHYLLLFGGHG 254 (448)
Q Consensus 195 G~~~~~~~~~d~~~~~~~~~yd~~~~~W~-~~~~~g~~p~~r~~~~~~~~---~~~i~v~GG~~ 254 (448)
... ..+.+||+++.+.. .+. .|..+- .+++.. ++.|||.....
T Consensus 217 ~~~------------~~v~~~d~~tG~~~~~i~----~p~~~~-t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 217 YNG------------GRVIRLDPVTGKRLQTVK----LPVDKT-TSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp ETT------------TEEEEECTTTCCEEEEEE----CSSSBE-EEEEEESGGGCEEEEEEBCT
T ss_pred cCC------------CEEEEEcCCCceEEEEEE----CCCCCc-eEEEEeCCCCCEEEEEcCCc
Confidence 321 23556799866653 333 232222 233332 25899887543
No 159
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=90.46 E-value=6.4 Score=35.58 Aligned_cols=119 Identities=9% Similarity=-0.097 Sum_probs=58.7
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEE----cccCC-------
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIF----GGRFG------- 97 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~----GG~~~------- 97 (448)
.++++|+.... ...+.+||+. ++.+.+..... ..+..+....++.-++.||+. |-...
T Consensus 95 ~dG~l~v~~~~-----~~~v~~~~~~-g~~~~~~~~~~-----~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~ 163 (305)
T 3dr2_A 95 AQQRLVHCEHG-----RRAITRSDAD-GQAHLLVGRYA-----GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPAD 163 (305)
T ss_dssp TTSCEEEEETT-----TTEEEEECTT-SCEEEEECEET-----TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCC
T ss_pred CCCCEEEEECC-----CCEEEEECCC-CCEEEEEeccC-----CCccCCCCCEEECCCCCEEEeCcCCCccccccccccc
Confidence 44556654321 1347788876 66655542210 011111122233336788885 43211
Q ss_pred -CCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCc-EEEEEecCCCCccCCceEEEeCCCCc
Q 013179 98 -SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 98 -~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
......+++||+.+++.+.+. . +.. -...+...++ .||+..........+.+++||+....
T Consensus 164 ~~~~~~~v~~~d~~~g~~~~~~-~--~~~---p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 164 PELAHHSVYRLPPDGSPLQRMA-D--LDH---PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp CSSSCEEEEEECSSSCCCEEEE-E--ESS---EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred cccCCCeEEEEcCCCCcEEEEe-c--CCC---CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 112356999999888877664 1 111 1233444444 57776542211112568999987654
No 160
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=90.26 E-value=11 Score=34.42 Aligned_cols=108 Identities=9% Similarity=0.027 Sum_probs=58.6
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCCCcEEEEEC
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVLDT 109 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~ 109 (448)
+.+++.|+.++ .+.+||+.+.+-...-. ..........+.- ++.+++.|+.++ .+..+|+
T Consensus 85 ~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd~ 145 (366)
T 3k26_A 85 HPLLAVAGSRG-----IIRIINPITMQCIKHYV---------GHGNAINELKFHPRDPNLLLSVSKDH-----ALRLWNI 145 (366)
T ss_dssp CEEEEEEETTC-----EEEEECTTTCCEEEEEE---------SCCSCEEEEEECSSCTTEEEEEETTS-----CEEEEET
T ss_pred CCEEEEecCCC-----EEEEEEchhceEeeeec---------CCCCcEEEEEECCCCCCEEEEEeCCC-----eEEEEEe
Confidence 46777777643 48889988775322211 1111122222222 567778877643 4899999
Q ss_pred CCCcEEEeecCCCCCCcC-cccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 110 DIWQWSELTSFGDLPSPR-DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 110 ~t~~W~~~~~~~~~p~~r-~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
.+.+-..... ...... .-.+++...++..++.|+.++ .+..||+.+.+
T Consensus 146 ~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~ 194 (366)
T 3k26_A 146 QTDTLVAIFG--GVEGHRDEVLSADYDLLGEKIMSCGMDH-----SLKLWRINSKR 194 (366)
T ss_dssp TTTEEEEEEC--STTSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESCSHH
T ss_pred ecCeEEEEec--ccccccCceeEEEECCCCCEEEEecCCC-----CEEEEECCCCc
Confidence 8876544431 111111 222233334556777777543 47888887654
No 161
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=89.87 E-value=12 Score=34.55 Aligned_cols=108 Identities=14% Similarity=0.097 Sum_probs=56.9
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE--CCeEEEEcccCCCCCCCcEEEE
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv~GG~~~~~~~~~~~~~ 107 (448)
++..++.|+.+ ..+.++|+.+++-...-. ..........+.. ++.+++.|+.++ .+..+
T Consensus 165 ~~~~l~t~s~D-----~~v~lwd~~~~~~~~~~~---------~h~~~v~~~~~~~~~~g~~l~sgs~Dg-----~v~~w 225 (354)
T 2pbi_B 165 SDMQILTASGD-----GTCALWDVESGQLLQSFH---------GHGADVLCLDLAPSETGNTFVSGGCDK-----KAMVW 225 (354)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTCCEEEEEE---------CCSSCEEEEEECCCSSCCEEEEEETTS-----CEEEE
T ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEEEEc---------CCCCCeEEEEEEeCCCCCEEEEEeCCC-----eEEEE
Confidence 34455555543 347889998876432211 1111111111111 346777787654 48899
Q ss_pred ECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCce
Q 013179 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (448)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (448)
|+.+.+....-. ... ..-.+++...++..++.|+.++ .+..||+.+..-
T Consensus 226 d~~~~~~~~~~~---~h~-~~v~~v~~~p~~~~l~s~s~D~-----~v~lwd~~~~~~ 274 (354)
T 2pbi_B 226 DMRSGQCVQAFE---THE-SDVNSVRYYPSGDAFASGSDDA-----TCRLYDLRADRE 274 (354)
T ss_dssp ETTTCCEEEEEC---CCS-SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEE
T ss_pred ECCCCcEEEEec---CCC-CCeEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcE
Confidence 998887644331 111 1112233334556777777654 377888877643
No 162
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=89.84 E-value=14 Score=37.75 Aligned_cols=79 Identities=10% Similarity=-0.072 Sum_probs=44.2
Q ss_pred ECCcEEEEEcCCCCCc----ccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCc
Q 013179 28 IGKSKVVVFGGLVDKR----FLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGD 103 (448)
Q Consensus 28 ~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~ 103 (448)
-.+++.++++..+... ....++++|+.+++-..+.... ....+..+.+..-+++.++++.. .+
T Consensus 69 SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~-------~~~~~~~~~~~SPdG~~la~~~~------~~ 135 (723)
T 1xfd_A 69 SPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPE-------VSNAKLQYAGWGPKGQQLIFIFE------NN 135 (723)
T ss_dssp CTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTT-------CCSCCCSBCCBCSSTTCEEEEET------TE
T ss_pred CCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCc-------cccccccccEECCCCCEEEEEEC------Ce
Confidence 3456666666543221 2368999999998765554221 11112223333335544445442 36
Q ss_pred EEEEECCCCcEEEeec
Q 013179 104 FWVLDTDIWQWSELTS 119 (448)
Q Consensus 104 ~~~~d~~t~~W~~~~~ 119 (448)
++++|..+++-.++..
T Consensus 136 i~~~~~~~g~~~~~~~ 151 (723)
T 1xfd_A 136 IYYCAHVGKQAIRVVS 151 (723)
T ss_dssp EEEESSSSSCCEEEEC
T ss_pred EEEEECCCCceEEEec
Confidence 8888888887776653
No 163
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=89.67 E-value=15 Score=35.20 Aligned_cols=66 Identities=9% Similarity=-0.009 Sum_probs=37.6
Q ss_pred CeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceE
Q 013179 87 CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (448)
Q Consensus 87 ~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (448)
+++++.|+.++ .+.+||+.+.+....... .... .-.+++.. ++.+++.|+.++ .+..||+.+.+..
T Consensus 210 ~~~l~s~~~d~-----~i~vwd~~~~~~~~~~~~--~h~~-~v~~~~~s-d~~~l~s~~~d~-----~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 210 HQFIITSDRDE-----HIKISHYPQCFIVDKWLF--GHKH-FVSSICCG-KDYLLLSAGGDD-----KIFAWDWKTGKNL 275 (450)
T ss_dssp CEEEEEEETTS-----CEEEEEESCTTCEEEECC--CCSS-CEEEEEEC-STTEEEEEESSS-----EEEEEETTTCCEE
T ss_pred CcEEEEEcCCC-----cEEEEECCCCceeeeeec--CCCC-ceEEEEEC-CCCEEEEEeCCC-----eEEEEECCCCcEe
Confidence 67778887543 588889887764433110 1111 11222333 556777776433 5888998877643
No 164
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=89.48 E-value=14 Score=34.54 Aligned_cols=67 Identities=12% Similarity=0.003 Sum_probs=37.8
Q ss_pred CeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCC-----cCcccEEEEECCc-EEEEEecCCCCccCCceEEEeC
Q 013179 87 CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPS-----PRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDT 160 (448)
Q Consensus 87 ~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~-----~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~ 160 (448)
+.+++.|+.++ .+..+|+.+.+-..... .+. ...-.+++...++ .+++.|+.++. ...+..||+
T Consensus 178 ~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~ 247 (416)
T 2pm9_A 178 AHVFASAGSSN-----FASIWDLKAKKEVIHLS---YTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDL 247 (416)
T ss_dssp TTEEEEESSSS-----CEEEEETTTTEEEEEEC---CCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEET
T ss_pred CcEEEEEcCCC-----CEEEEECCCCCcceEEe---ccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeC
Confidence 56777777543 48999998877544432 221 1122223333333 57777765442 125788888
Q ss_pred CCC
Q 013179 161 ISL 163 (448)
Q Consensus 161 ~t~ 163 (448)
.+.
T Consensus 248 ~~~ 250 (416)
T 2pm9_A 248 RNA 250 (416)
T ss_dssp TST
T ss_pred CCC
Confidence 765
No 165
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=89.41 E-value=12 Score=33.74 Aligned_cols=108 Identities=8% Similarity=0.140 Sum_probs=53.5
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCCcE---EeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEE
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLW---FQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W---~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~ 107 (448)
+.+++-||.++ .+.++|+.+..- ...... ..........++.-++++++.|+.++ .+..+
T Consensus 51 ~~~l~S~s~D~-----~i~vWd~~~~~~~~~~~~~~l-------~~h~~~V~~~~~s~dg~~l~s~~~d~-----~i~~~ 113 (340)
T 4aow_A 51 PDMILSASRDK-----TIIMWKLTRDETNYGIPQRAL-------RGHSHFVSDVVISSDGQFALSGSWDG-----TLRLW 113 (340)
T ss_dssp TTEEEEEETTS-----CEEEEEECCSSSCSEEEEEEE-------CCCSSCEEEEEECTTSSEEEEEETTS-----EEEEE
T ss_pred CCEEEEEcCCC-----eEEEEECCCCCcccceeeEEE-------eCCCCCEEEEEECCCCCEEEEEcccc-----cceEE
Confidence 56888888754 366777765432 111111 01111111222223566777777553 47778
Q ss_pred ECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
+........... .............++..++.|+.++ .+..+|.....
T Consensus 114 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~s~s~d~-----~~~~~d~~~~~ 161 (340)
T 4aow_A 114 DLTTGTTTRRFV----GHTKDVLSVAFSSDNRQIVSGSRDK-----TIKLWNTLGVC 161 (340)
T ss_dssp ETTTTEEEEEEE----CCSSCEEEEEECTTSSCEEEEETTS-----CEEEECTTSCE
T ss_pred eecccceeeeec----CCCCceeEEEEeecCccceeecCCC-----eEEEEEeCCCc
Confidence 887776555442 1112222223334445666676544 35667765544
No 166
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=89.37 E-value=22 Score=36.79 Aligned_cols=211 Identities=11% Similarity=0.053 Sum_probs=100.1
Q ss_pred ccCceEEEEcC---CCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecC
Q 013179 44 FLSDVVVYDID---NKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSF 120 (448)
Q Consensus 44 ~~~~~~~yd~~---~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~ 120 (448)
....+|+.+.. .+.|+.+-....-+ ...........+.-+++.++++...+......++++|+.+++......
T Consensus 131 ~~~~l~~~~~~~~~~~~~~~lld~~~l~---~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~- 206 (741)
T 1yr2_A 131 NQSQLLVRPADAPVGTKGRVLLDPNTWA---KDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL- 206 (741)
T ss_dssp SSCEEEEEETTSCTTCCCEEEECGGGCC-------EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-
T ss_pred eEEEEEEEcCCccCCCCCEEEECHHHhc---cCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-
Confidence 34678888876 67777653211000 000001111222225666666544333333469999999998865431
Q ss_pred CCCCCcCcccEEEEECCcEEEEEecCCCC---------ccCCceEEEeCCCCceE--eecCCCCCCCccCCceeEEe-CC
Q 013179 121 GDLPSPRDFAAASAIGNRKIVMYGGWDGK---------KWLSDVYVLDTISLEWM--QLPVTGSVPPPRCGHTATMV-EK 188 (448)
Q Consensus 121 ~~~p~~r~~~~~~~~~~~~iyv~GG~~~~---------~~~~~v~~yd~~t~~W~--~~~~~~~~p~~r~~~~~~~~-~~ 188 (448)
+.... ...+-..++.|++. ..+.. .....++++++.+..-+ .+. . ....+......... ++
T Consensus 207 ---~~~~~-~~~~wspD~~l~~~-~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~-~-~~~~~~~~~~~~~SpDG 279 (741)
T 1yr2_A 207 ---KWVKF-SGLAWLGNDALLYS-RFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVF-A-TPELPKRGHGASVSSDG 279 (741)
T ss_dssp ---EEEES-CCCEESTTSEEEEE-ECCCC--------CCCCCEEEEEETTSCGGGCEEEE-C-CTTCTTCEEEEEECTTS
T ss_pred ---CCcee-ccEEEECCCEEEEE-EecCcccccccccCCCCCEEEEEECCCCchhCEEEe-c-cCCCCeEEEEEEECCCC
Confidence 11111 11222234344443 33222 12456888888766521 221 0 11112222222222 45
Q ss_pred EEEEEcccCCCCCccCceeeecccccccCCCC--c-eEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCcccccce
Q 013179 189 RLLIYGGRGGGGPIMGDLWALKGLIEEENETP--G-WTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIY 265 (448)
Q Consensus 189 ~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~--~-W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~ 265 (448)
+..++....... ..+++|.+ |+.+. . |..+... ..... ..+...++.||+....+. .
T Consensus 280 ~~l~~~~~~~~~-~~~~l~~~------d~~~~~~~~~~~l~~~---~~~~~-~~~~~dg~~l~~~s~~~~---------~ 339 (741)
T 1yr2_A 280 RWVVITSSEGTD-PVNTVHVA------RVTNGKIGPVTALIPD---LKAQW-DFVDGVGDQLWFVSGDGA---------P 339 (741)
T ss_dssp CEEEEEEECTTC-SCCEEEEE------EEETTEECCCEEEECS---SSSCE-EEEEEETTEEEEEECTTC---------T
T ss_pred CEEEEEEEccCC-CcceEEEE------ECCCCCCcccEEecCC---CCceE-EEEeccCCEEEEEECCCC---------C
Confidence 434443332211 13344444 77666 6 8777621 11222 122346778887754322 1
Q ss_pred eCcEEEEEcCC--CceEEeccC
Q 013179 266 YNDTIILDRLS--AQWKRLPIG 285 (448)
Q Consensus 266 ~~~v~~yd~~~--~~W~~~~~~ 285 (448)
...++++|+.+ ..|..+-+.
T Consensus 340 ~~~l~~~d~~~~~~~~~~l~~~ 361 (741)
T 1yr2_A 340 LKKIVRVDLSGSTPRFDTVVPE 361 (741)
T ss_dssp TCEEEEEECSSSSCEEEEEECC
T ss_pred CCEEEEEeCCCCccccEEEecC
Confidence 25699999887 578887543
No 167
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=89.37 E-value=8.6 Score=34.95 Aligned_cols=107 Identities=13% Similarity=0.093 Sum_probs=52.6
Q ss_pred EEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-C---CeEEEEcccCCCCCCCcEEEE
Q 013179 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-D---CHMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 32 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~---~~lyv~GG~~~~~~~~~~~~~ 107 (448)
.+++.|+.+. .-..+.+||+.+++.......+ ....-.++... + +.+++.|+.++ .+..|
T Consensus 32 ~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~iw 95 (357)
T 3i2n_A 32 KFVTMGNFAR--GTGVIQLYEIQHGDLKLLREIE---------KAKPIKCGTFGATSLQQRYLATGDFGG-----NLHIW 95 (357)
T ss_dssp EEEEEEC--C--CCEEEEEEEECSSSEEEEEEEE---------ESSCEEEEECTTCCTTTCCEEEEETTS-----CEEEE
T ss_pred eEEEecCccC--CCcEEEEEeCCCCcccceeeec---------ccCcEEEEEEcCCCCCCceEEEecCCC-----eEEEE
Confidence 5666776421 1235888999988765443211 01111122221 2 46677776543 47888
Q ss_pred ECCCCc--EEEeecCCCCCCcCcccEEEE------ECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 108 DTDIWQ--WSELTSFGDLPSPRDFAAASA------IGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 108 d~~t~~--W~~~~~~~~~p~~r~~~~~~~------~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
|..+.+ -..+.. .... -.++.. -.++..++.|+.++ .+..||+.+..
T Consensus 96 d~~~~~~~~~~~~~---~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d~-----~i~vwd~~~~~ 150 (357)
T 3i2n_A 96 NLEAPEMPVYSVKG---HKEI--INAIDGIGGLGIGEGAPEIVTGSRDG-----TVKVWDPRQKD 150 (357)
T ss_dssp CTTSCSSCSEEECC---CSSC--EEEEEEESGGGCC-CCCEEEEEETTS-----CEEEECTTSCS
T ss_pred eCCCCCccEEEEEe---cccc--eEEEeeccccccCCCccEEEEEeCCC-----eEEEEeCCCCC
Confidence 887665 222211 1111 111111 12445667776543 47888887764
No 168
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=89.27 E-value=3.1 Score=43.43 Aligned_cols=96 Identities=10% Similarity=0.068 Sum_probs=53.5
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEE-CC--cEEEEEecCCCCccCCceEEEeCCC
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI-GN--RKIVMYGGWDGKKWLSDVYVLDTIS 162 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~--~~iyv~GG~~~~~~~~~v~~yd~~t 162 (448)
++.+++.|+.++ .+.+||..+.++..+.. +......-.++.. .+ +..++.|+.++ .+..||+.+
T Consensus 20 dg~~latg~~dg-----~I~vwd~~~~~~~~~~~---l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg-----~I~vwd~~~ 86 (753)
T 3jro_A 20 YGKRLATCSSDK-----TIKIFEVEGETHKLIDT---LTGHEGPVWRVDWAHPKFGTILASCSYDG-----KVLIWKEEN 86 (753)
T ss_dssp SSCCEEEEETTT-----EEEEEEEETTEEEEEEE---ECCCSSCEEEEEECCTTSCSEEEEEETTS-----CEEEEEEET
T ss_pred CCCeEEEEECCC-----cEEEEecCCCCCcccee---ccCCcCceEEEEecCCCCCCEEEEEeCCC-----eEEEEECCC
Confidence 456666776543 47888888777776653 2222222222232 33 56777777654 378899988
Q ss_pred CceEeecCCCCCCCccCCc-eeEEe-C--CEEEEEcccC
Q 013179 163 LEWMQLPVTGSVPPPRCGH-TATMV-E--KRLLIYGGRG 197 (448)
Q Consensus 163 ~~W~~~~~~~~~p~~r~~~-~~~~~-~--~~lyv~GG~~ 197 (448)
++|..+.. .......- ++... + +.+++.|+.+
T Consensus 87 ~~~~~~~~---~~~h~~~V~~v~~sp~~~~~~l~sgs~d 122 (753)
T 3jro_A 87 GRWSQIAV---HAVHSASVNSVQWAPHEYGPLLLVASSD 122 (753)
T ss_dssp TEEEEEEE---ECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred Cccccccc---ccCCCCCeEEEEECCCCCCCEEEEEeCC
Confidence 88776652 22111112 22222 2 5677777764
No 169
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=89.19 E-value=15 Score=34.62 Aligned_cols=215 Identities=14% Similarity=0.079 Sum_probs=111.1
Q ss_pred eEEEEcCC--CcEEeeeecCCCCCCCCCCCCCcceeEEEE---CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCC
Q 013179 48 VVVYDIDN--KLWFQPECTGNGSNGQVGPGPRAFHIAVAI---DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGD 122 (448)
Q Consensus 48 ~~~yd~~~--~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~ 122 (448)
++.++... .+|+.+... +....-++++.. .+.||+.+.... .-..+++.+-...+|+++.....
T Consensus 33 l~~~~~~~~g~~W~~~~~~---------~~~~~v~~i~~dp~~~~~l~~g~~~g~--~g~gl~~s~D~G~tW~~~~~~~~ 101 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPV---------FLGHTIHHIVQDPREPERMLMAARTGH--LGPTVFRSDDGGGNWTEATRPPA 101 (394)
T ss_dssp EEEEEECTTSCSEEEEEEE---------STTSEEEEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCC
T ss_pred eEEEECCCCCCCceECCcc---------CCCCceEEEEECCCCCCeEEEEecCCC--CCccEEEeCCCCCCceECCcccc
Confidence 77777765 689886421 112233455554 467887653210 11247887777889999864211
Q ss_pred CCCc--C-----ccc--EEEEE--C-CcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCC--------------
Q 013179 123 LPSP--R-----DFA--AASAI--G-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPP-------------- 176 (448)
Q Consensus 123 ~p~~--r-----~~~--~~~~~--~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~-------------- 176 (448)
.+.. + ..+ +.++. . .+.||+.+. ...+++.+-...+|+.+......|.
T Consensus 102 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~ 175 (394)
T 3b7f_A 102 FNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPD 175 (394)
T ss_dssp CCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CC
T ss_pred CCCcccccccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCC
Confidence 2211 1 111 22222 1 457887652 2358888878889998852111121
Q ss_pred ccCCceeEEe---CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCC---CCCCC-----CceeEEEEeC-
Q 013179 177 PRCGHTATMV---EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPG---QAPSS-----RCGHTITSGG- 244 (448)
Q Consensus 177 ~r~~~~~~~~---~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g---~~p~~-----r~~~~~~~~~- 244 (448)
...-+++... ++.||+..... .+++.+-...+|+.+.... .+|.+ ...+.+++..
T Consensus 176 ~~~i~~i~~d~~~~~~l~vg~~~g-------------gl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~ 242 (394)
T 3b7f_A 176 GPKMHSILVDPRDPKHLYIGMSSG-------------GVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPA 242 (394)
T ss_dssp CCEEEEEEECTTCTTCEEEEEETB-------------EEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSS
T ss_pred CCceeEEEECCCCCCEEEEEECCC-------------CEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCC
Confidence 1112333333 25677654321 1223355678999875311 12211 2234555432
Q ss_pred --CEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEeccCCCCCC--CccceEEEEE---CCEEEEEc
Q 013179 245 --HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPP--ARAYHSMTCL---GSLYLLFG 308 (448)
Q Consensus 245 --~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~--~r~~~~~~~~---~~~i~v~G 308 (448)
+.||+-.. ..+++.+-...+|+.+... .|. ..+..+++.. .+.||+..
T Consensus 243 ~~~~l~vg~~--------------~gl~~s~D~G~tW~~~~~~--l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 243 APDILYQQNH--------------CGIYRMDRREGVWKRIGDA--MPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp STTEEEEEET--------------TEEEEEETTTTEEECGGGG--SCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred CCCEEEEEcC--------------CeEEEeCCCCCcceECCCC--CCCCCccceEEEEECCCCCCEEEEEe
Confidence 56777421 2488888889999998652 121 1333444432 36777753
No 170
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=89.16 E-value=2.3 Score=40.90 Aligned_cols=97 Identities=9% Similarity=0.000 Sum_probs=51.1
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCC-cCcccEEEEE-CCcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPS-PRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~-~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
++.+++.|+.++ .+..+|+.+..-..+.. ... ...-.+++.. .++.+++.|+.++ .+..+|+.++
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~---~~gH~~~V~~l~f~p~~~~~l~s~s~D~-----~v~iwd~~~~ 197 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIK---GIGAGGSITGLKFNPLNTNQFYASSMEG-----TTRLQDFKGN 197 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEEC---CCSSSCCCCEEEECSSCTTEEEEECSSS-----CEEEEETTSC
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEE---ccCCCCCEEEEEEeCCCCCEEEEEeCCC-----EEEEeeccCC
Confidence 456778887664 48888887765433321 111 1111223332 2445667777554 3778898887
Q ss_pred ceEeecCCCCCCCccCCceeEEe-CCEEEEEcccC
Q 013179 164 EWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRG 197 (448)
Q Consensus 164 ~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~ 197 (448)
....+.... .......++... ++.+++.|+.+
T Consensus 198 ~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~~d 230 (435)
T 4e54_B 198 ILRVFASSD--TINIWFCSLDVSASSRMVVTGDNV 230 (435)
T ss_dssp EEEEEECCS--SCSCCCCCEEEETTTTEEEEECSS
T ss_pred ceeEEeccC--CCCccEEEEEECCCCCEEEEEeCC
Confidence 766554111 111112223333 56677777754
No 171
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=89.08 E-value=9.6 Score=32.29 Aligned_cols=152 Identities=14% Similarity=0.219 Sum_probs=78.6
Q ss_pred eEEEECCeEEEEcccCCCCCCCcEEEEECCCC--cEEEeec---CCCCCCcCcccEEEEE-CCcEEEEEecCCCCccCCc
Q 013179 81 IAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIW--QWSELTS---FGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSD 154 (448)
Q Consensus 81 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~--~W~~~~~---~~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~ 154 (448)
+++.+++++|+|=| +.+|+++.... ....... -..+|... -++... .++++|+|-| +.
T Consensus 11 Ai~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~I--DAa~~~~~~~~~yfFkG-------~~ 74 (195)
T 1itv_A 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRKL--DSVFEEPLSKKLFFFSG-------RQ 74 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSSC--SEEEECTTTCCEEEEET-------TE
T ss_pred EEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCCCc--cEEEEECCCCeEEEEeC-------CE
Confidence 44567999999976 24888887652 2322211 12355432 233333 3568999977 44
Q ss_pred eEEEeCCCCce-EeecCCCCCCCc--cCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceE-----Eec
Q 013179 155 VYVLDTISLEW-MQLPVTGSVPPP--RCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT-----QLK 226 (448)
Q Consensus 155 v~~yd~~t~~W-~~~~~~~~~p~~--r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~-----~~~ 226 (448)
.|+|+..+..- +.+..- .+|.. ....+....++++|+|-|.. .| .||..+++-. .+.
T Consensus 75 yw~~~~~~~~~Pk~i~~~-G~p~~~~~iDAA~~~~~g~~yfFkg~~--------yw------r~d~~~~~~~~gyPr~i~ 139 (195)
T 1itv_A 75 VWVYTGASVLGPRRLDKL-GLGADVAQVTGALRSGRGKMLLFSGRR--------LW------RFDVKAQMVDPRSASEVD 139 (195)
T ss_dssp EEEEETTEEEEEEEGGGG-TCCTTCCCCCEEEECSTTEEEEEETTE--------EE------EEETTTTEECGGGCEEHH
T ss_pred EEEEcCCccCCCEEeeec-ccCCCccceeEEEEcCCCeEEEEeCCE--------EE------EEeCCcccccCCCccChh
Confidence 67777542111 112211 22321 33333332368999997731 22 3354443211 111
Q ss_pred --CCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceE
Q 013179 227 --LPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWK 280 (448)
Q Consensus 227 --~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 280 (448)
-+ .+|. .-.++...++.+|.|-| +..|+||..+..=.
T Consensus 140 ~~w~-Gvp~--~idaa~~~~g~~Yffkg--------------~~y~~~~~~~~~v~ 178 (195)
T 1itv_A 140 RMFP-GVPL--DTHDVFQFREKAYFCQD--------------RFYWRVSSRSELNQ 178 (195)
T ss_dssp HHST-TSCS--SCSEEEEETTEEEEEET--------------TEEEEEECCTTCCE
T ss_pred hcCC-CCCC--CCCEEEEeCCeEEEEeC--------------CEEEEEECCccEEe
Confidence 01 1222 12345556789999976 46899998776543
No 172
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=88.82 E-value=18 Score=35.14 Aligned_cols=59 Identities=15% Similarity=0.217 Sum_probs=37.3
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
++++|+|-| +..|+||..+++..... -..+|. . -++... ++++|+|-| +..|+||..+.
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~-w~gi~~--i-DAA~~~-~g~~YfFkG-------~~y~rfd~~~~ 216 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERS-WPAVGN--C-TSALRW-LGRYYCFQG-------NQFLRFNPVSG 216 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEEC-CTTSCC--C-SEEEEE-TTEEEEEET-------TEEEEECTTTC
T ss_pred CCeEEEEec-------ccEEEEecccceeeccc-CCCCCc--c-chheee-CCceEEEEC-------CEEEEEcCccC
Confidence 678899977 35899999988765422 122443 2 233333 469999977 34677776543
No 173
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=88.72 E-value=23 Score=36.28 Aligned_cols=148 Identities=9% Similarity=-0.037 Sum_probs=80.0
Q ss_pred CcEEEEECCCC--cEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCC---ceEeecCCCCCCC
Q 013179 102 GDFWVLDTDIW--QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL---EWMQLPVTGSVPP 176 (448)
Q Consensus 102 ~~~~~~d~~t~--~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~---~W~~~~~~~~~p~ 176 (448)
+++|.+|..+. .|..+.. +... ........++.+|+....+.. ...++.+|+.+. .|+.+.+ ...
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~----~~~~-~~~~~~~~g~~l~~~t~~~~~--~~~l~~~d~~~~~~~~~~~l~~---~~~ 328 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQG----DLDA-DVSLVDNKGSTLYLLTNRDAP--NRRLVTVDAANPGPAHWRDLIP---ERQ 328 (693)
T ss_dssp CEEEEEETTSTTCCCEEEEC----SSSS-CEEEEEEETTEEEEEECTTCT--TCEEEEEETTSCCGGGCEEEEC---CCS
T ss_pred cEEEEEECCCCCCceEEEeC----CCCc-eEEEEeccCCEEEEEECCCCC--CCEEEEEeCCCCCccccEEEec---CCC
Confidence 68999998776 7888763 1111 122222334589988765432 346899998763 4887652 111
Q ss_pred ccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE--eCCEEEEE-cCC
Q 013179 177 PRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLF-GGH 253 (448)
Q Consensus 177 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~--~~~~i~v~-GG~ 253 (448)
... .....++.|++..-.++ ...+..+|+++.....+.. |.......... .++.+++. .+.
T Consensus 329 ~~~--~~s~~g~~lv~~~~~~g----------~~~l~~~d~~g~~~~~l~~----p~~~~~~~~~~~~d~~~l~~~~ss~ 392 (693)
T 3iuj_A 329 QVL--TVHSGSGYLFAEYMVDA----------TARVEQFDYEGKRVREVAL----PGLGSVSGFNGKHDDPALYFGFENY 392 (693)
T ss_dssp SCE--EEEEETTEEEEEEEETT----------EEEEEEECTTSCEEEEECC----SSSSEEEECCCCTTCSCEEEEEECS
T ss_pred CEE--EEEEECCEEEEEEEECC----------eeEEEEEECCCCeeEEeec----CCCceEEeeecCCCCCEEEEEecCC
Confidence 111 44445667665543322 1344556777665555542 22211111111 12334333 222
Q ss_pred CCCCCcccccceeCcEEEEEcCCCceEEeccC
Q 013179 254 GTGGWLSRYDIYYNDTIILDRLSAQWKRLPIG 285 (448)
Q Consensus 254 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~ 285 (448)
. ....++.||+.+.+.+.+...
T Consensus 393 ~----------tP~~l~~~d~~~g~~~~l~~~ 414 (693)
T 3iuj_A 393 A----------QPPTLYRFEPKSGAISLYRAS 414 (693)
T ss_dssp S----------SCCEEEEECTTTCCEEEEECC
T ss_pred C----------CCCEEEEEECCCCeEEEEEeC
Confidence 2 125799999999888877654
No 174
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=88.29 E-value=14 Score=33.04 Aligned_cols=63 Identities=11% Similarity=0.225 Sum_probs=38.7
Q ss_pred CeEEEEcccCCCCCCCcEEEEECCCCc--EEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 87 CHMFIFGGRFGSRRLGDFWVLDTDIWQ--WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 87 ~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
+++++.|..+ ..+..+|+++++ |+.-. +.....|.+....++.+++.+ -+.++.||+ +++
T Consensus 5 ~~~lv~~~~~-----~~v~~~d~~tG~~~w~~~~-----~~~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G~ 66 (276)
T 3no2_A 5 QHLLVGGSGW-----NKIAIINKDTKEIVWEYPL-----EKGWECNSVAATKAGEILFSY-------SKGAKMITR-DGR 66 (276)
T ss_dssp CEEEEECTTC-----SEEEEEETTTTEEEEEEEC-----CTTCCCCEEEECTTSCEEEEC-------BSEEEEECT-TSC
T ss_pred CcEEEeeCCC-----CEEEEEECCCCeEEEEeCC-----CccCCCcCeEECCCCCEEEeC-------CCCEEEECC-CCC
Confidence 5677776543 358889997776 55432 111234666666677888832 245899998 443
Q ss_pred --eEe
Q 013179 165 --WMQ 167 (448)
Q Consensus 165 --W~~ 167 (448)
|+.
T Consensus 67 ~~W~~ 71 (276)
T 3no2_A 67 ELWNI 71 (276)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 654
No 175
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=88.19 E-value=15 Score=33.50 Aligned_cols=193 Identities=10% Similarity=0.036 Sum_probs=91.3
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEEC
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDT 109 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~ 109 (448)
++.+++.||.++ .+.+||+.+++-...-....... -.-.|. ..++..++.+.++-. ...+..||.
T Consensus 47 d~~~l~sg~~Dg-----~v~iwd~~~~~~~~~~~~~~v~~--~~~~~~--~~s~s~D~~i~~w~~------~~~~~~~~~ 111 (343)
T 3lrv_A 47 DKWVCMCRCEDG-----ALHFTQLKDSKTITTITTPNPRT--GGEHPA--IISRGPCNRLLLLYP------GNQITILDS 111 (343)
T ss_dssp EEEEEEEEEETT-----EEEEEEESSSSCEEEEEEECCCT--TCCCCS--EEEECSTTEEEEEET------TTEEEEEET
T ss_pred CCCEEEEECCCC-----cEEEEECCCCcEEEEEecCCcee--eeeCCc--eEEecCCCeEEEEEc------cCceEEeec
Confidence 356788888654 47888888765321110100000 000111 222223455555532 235677888
Q ss_pred CCCcE-EEeecCCCCCCcCcccEEEEEC--CcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe
Q 013179 110 DIWQW-SELTSFGDLPSPRDFAAASAIG--NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV 186 (448)
Q Consensus 110 ~t~~W-~~~~~~~~~p~~r~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~ 186 (448)
.+.+- .... .+....-.+++... ++.+++.|+.++ .+..||+.+.+-..+. .......-.++...
T Consensus 112 ~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~---~~~~~~~i~~~~~~ 179 (343)
T 3lrv_A 112 KTNKVLREIE----VDSANEIIYMYGHNEVNTEYFIWADNRG-----TIGFQSYEDDSQYIVH---SAKSDVEYSSGVLH 179 (343)
T ss_dssp TTCCEEEEEE----CCCSSCEEEEECCC---CCEEEEEETTC-----CEEEEESSSSCEEEEE---CCCSSCCCCEEEEC
T ss_pred CCcceeEEee----cCCCCCEEEEEcCCCCCCCEEEEEeCCC-----cEEEEECCCCcEEEEE---ecCCCCceEEEEEC
Confidence 77763 3322 11111112222223 556777777554 3788998887765443 11111112233333
Q ss_pred -CCEEEEEcccCCCCCccCceeeecccccccCCCCceE--EecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCcccc
Q 013179 187 -EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT--QLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRY 262 (448)
Q Consensus 187 -~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~--~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~ 262 (448)
++.+++.|+.++ .+..||..+.+-. .+.. .....-.++.. -++..++.|+ .
T Consensus 180 pdg~~lasg~~dg------------~i~iwd~~~~~~~~~~~~~----~h~~~v~~l~fs~~g~~l~s~~-~-------- 234 (343)
T 3lrv_A 180 KDSLLLALYSPDG------------ILDVYNLSSPDQASSRFPV----DEEAKIKEVKFADNGYWMVVEC-D-------- 234 (343)
T ss_dssp TTSCEEEEECTTS------------CEEEEESSCTTSCCEECCC----CTTSCEEEEEECTTSSEEEEEE-S--------
T ss_pred CCCCEEEEEcCCC------------EEEEEECCCCCCCccEEec----cCCCCEEEEEEeCCCCEEEEEe-C--------
Confidence 567777777543 2345576665533 2221 01111123333 2445556655 2
Q ss_pred cceeCcEEEEEcCCCc
Q 013179 263 DIYYNDTIILDRLSAQ 278 (448)
Q Consensus 263 ~~~~~~v~~yd~~~~~ 278 (448)
+.+.++|+.+..
T Consensus 235 ----~~v~iwd~~~~~ 246 (343)
T 3lrv_A 235 ----QTVVCFDLRKDV 246 (343)
T ss_dssp ----SBEEEEETTSST
T ss_pred ----CeEEEEEcCCCC
Confidence 258888987654
No 176
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=88.07 E-value=24 Score=35.64 Aligned_cols=122 Identities=11% Similarity=0.086 Sum_probs=64.3
Q ss_pred CcEEEEEcCCCCCcccCceEEEEc-CCCc--EEeeeecCCCCCCCCCCCC---CcceeEEE--ECCe----EEEEcccCC
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDI-DNKL--WFQPECTGNGSNGQVGPGP---RAFHIAVA--IDCH----MFIFGGRFG 97 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~-~~~~--W~~~~~~~~~~~~~~~p~~---R~~h~~~~--~~~~----lyv~GG~~~ 97 (448)
+++||+...+ ...++.+|. .+++ |+.-..... ...+.. ......++ .+++ ||+...
T Consensus 62 ~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~----~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~--- 129 (599)
T 1w6s_A 62 DGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNP----AARAVACCDLVNRGLAYWPGDGKTPALILKTQL--- 129 (599)
T ss_dssp TTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCG----GGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT---
T ss_pred CCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCc----cccccccccccccceEEEecCCcceeEEEEEcC---
Confidence 4889987753 245999999 7774 876432110 000000 11122344 4666 877532
Q ss_pred CCCCCcEEEEECCCCc--EEEeecCCCCCCc-CcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc--eEeec
Q 013179 98 SRRLGDFWVLDTDIWQ--WSELTSFGDLPSP-RDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLP 169 (448)
Q Consensus 98 ~~~~~~~~~~d~~t~~--W~~~~~~~~~p~~-r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~ 169 (448)
...++.+|..|++ |+.-.. ..... ....+-++. ++.+|+-.+.........++.||..+.+ |+.-.
T Consensus 130 ---dg~l~AlDa~TG~~~W~~~~~--~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 130 ---DGNVAALNAETGETVWKVENS--DIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp ---TSEEEEEETTTCCEEEEEECC--CGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ---CCEEEEEECCCCCEEEeecCC--CCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 2358999998876 875431 11001 111222334 4477764322111223568999998765 87653
No 177
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=88.05 E-value=25 Score=35.85 Aligned_cols=139 Identities=13% Similarity=0.142 Sum_probs=65.5
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++.+++.|+.++ .+.++|+.+++-...- . .+.......+..-++..++.|+.++ .+.++|
T Consensus 440 ~~g~~l~sgs~Dg-----~v~vwd~~~~~~~~~~-~--------~h~~~v~~~~~s~~~~~l~s~s~D~-----~i~iwd 500 (694)
T 3dm0_A 440 SDGQFALSGSWDG-----ELRLWDLAAGVSTRRF-V--------GHTKDVLSVAFSLDNRQIVSASRDR-----TIKLWN 500 (694)
T ss_dssp TTSSEEEEEETTS-----EEEEEETTTTEEEEEE-E--------CCSSCEEEEEECTTSSCEEEEETTS-----CEEEEC
T ss_pred CCCCEEEEEeCCC-----cEEEEECCCCcceeEE-e--------CCCCCEEEEEEeCCCCEEEEEeCCC-----EEEEEE
Confidence 4566777777643 4888998887532211 1 1111222222223556667776543 367777
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEEE-CCc--EEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEE
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASAI-GNR--KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATM 185 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~--~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~ 185 (448)
.....-..+.. .....+..-.++.+ .++ .+++.|+.++ .+..||+.+.+-...- ...... -.++..
T Consensus 501 ~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~-----~v~vwd~~~~~~~~~~---~~h~~~-v~~v~~ 569 (694)
T 3dm0_A 501 TLGECKYTISE--GGEGHRDWVSCVRFSPNTLQPTIVSASWDK-----TVKVWNLSNCKLRSTL---AGHTGY-VSTVAV 569 (694)
T ss_dssp TTSCEEEEECS--STTSCSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTCCEEEEE---CCCSSC-EEEEEE
T ss_pred CCCCcceeecc--CCCCCCCcEEEEEEeCCCCcceEEEEeCCC-----eEEEEECCCCcEEEEE---cCCCCC-EEEEEE
Confidence 65543222221 11111111122222 222 4566666543 4788888776544321 111111 112222
Q ss_pred e-CCEEEEEcccC
Q 013179 186 V-EKRLLIYGGRG 197 (448)
Q Consensus 186 ~-~~~lyv~GG~~ 197 (448)
. ++++++.|+.+
T Consensus 570 spdg~~l~sg~~D 582 (694)
T 3dm0_A 570 SPDGSLCASGGKD 582 (694)
T ss_dssp CTTSSEEEEEETT
T ss_pred eCCCCEEEEEeCC
Confidence 2 56777777764
No 178
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=87.97 E-value=8.2 Score=42.61 Aligned_cols=107 Identities=17% Similarity=0.193 Sum_probs=58.5
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..+++|+.+ ..+..||..+++..... ..........++.-+++.++.|+.++ .+..+|
T Consensus 971 p~g~~l~~g~~~-----g~i~i~d~~~~~~~~~~---------~~h~~~v~~l~~s~dg~~l~s~~~dg-----~i~vwd 1031 (1249)
T 3sfz_A 971 PHLEYVAFGDED-----GAIKIIELPNNRVFSSG---------VGHKKAVRHIQFTADGKTLISSSEDS-----VIQVWN 1031 (1249)
T ss_dssp TTSSEEEEEETT-----SCCEEEETTTTSCEEEC---------CCCSSCCCCEEECSSSSCEEEECSSS-----BEEEEE
T ss_pred CCCCEEEEEcCC-----CCEEEEEcCCCceeeec---------ccCCCceEEEEECCCCCEEEEEcCCC-----EEEEEE
Confidence 446677777653 34788998877643321 11222222333333566667776543 588999
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCce
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (448)
..+++...+.. ......+++...++.+ +.|+.++ .+..||+.+.+-
T Consensus 1032 ~~~~~~~~~~~-----~~~~v~~~~~~~~~~l-~~~~~dg-----~v~vwd~~~~~~ 1077 (1249)
T 3sfz_A 1032 WQTGDYVFLQA-----HQETVKDFRLLQDSRL-LSWSFDG-----TVKVWNVITGRI 1077 (1249)
T ss_dssp TTTTEEECCBC-----CSSCEEEEEECSSSEE-EEEESSS-----EEEEEETTTTCC
T ss_pred CCCCceEEEec-----CCCcEEEEEEcCCCcE-EEEECCC-----cEEEEECCCCce
Confidence 99887654331 1112223333345454 4555433 478889877653
No 179
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=87.92 E-value=17 Score=33.65 Aligned_cols=145 Identities=11% Similarity=0.019 Sum_probs=75.4
Q ss_pred eEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEEC-CcEEEEEecCCCCccCCceEEEeCCCCceE
Q 013179 88 HMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (448)
Q Consensus 88 ~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (448)
++++.|+.++ .+.+||+.+.+....... ......-.+++... ++.+++.|+.++ .+..+|+.+....
T Consensus 87 ~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~ 154 (383)
T 3ei3_B 87 TTVAVGSKGG-----DIILWDYDVQNKTSFIQG--MGPGDAITGMKFNQFNTNQLFVSSIRG-----ATTLRDFSGSVIQ 154 (383)
T ss_dssp TEEEEEEBTS-----CEEEEETTSTTCEEEECC--CSTTCBEEEEEEETTEEEEEEEEETTT-----EEEEEETTSCEEE
T ss_pred CEEEEEcCCC-----eEEEEeCCCcccceeeec--CCcCCceeEEEeCCCCCCEEEEEeCCC-----EEEEEECCCCceE
Confidence 6777777653 489999998877665421 01111222333334 456777776543 4788998877766
Q ss_pred eecCCCCCCCc-cCCceeEEe-CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEe-
Q 013179 167 QLPVTGSVPPP-RCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG- 243 (448)
Q Consensus 167 ~~~~~~~~p~~-r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~- 243 (448)
.+. ..... ..-.++... ++.+++.|+.++ .+..||+.......+.. .. ..-.+++..
T Consensus 155 ~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~------------~i~i~d~~~~~~~~~~~----h~-~~v~~~~~~~ 214 (383)
T 3ei3_B 155 VFA---KTDSWDYWYCCVDVSVSRQMLATGDSTG------------RLLLLGLDGHEIFKEKL----HK-AKVTHAEFNP 214 (383)
T ss_dssp EEE---CCCCSSCCEEEEEEETTTTEEEEEETTS------------EEEEEETTSCEEEEEEC----SS-SCEEEEEECS
T ss_pred EEe---ccCCCCCCeEEEEECCCCCEEEEECCCC------------CEEEEECCCCEEEEecc----CC-CcEEEEEECC
Confidence 664 21111 111222222 456667776542 23344654443333331 11 111233332
Q ss_pred CCE-EEEEcCCCCCCCcccccceeCcEEEEEcCC
Q 013179 244 GHY-LLLFGGHGTGGWLSRYDIYYNDTIILDRLS 276 (448)
Q Consensus 244 ~~~-i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~ 276 (448)
++. +++.|+.+ ..+.+||+.+
T Consensus 215 ~~~~~l~s~~~d------------~~i~iwd~~~ 236 (383)
T 3ei3_B 215 RCDWLMATSSVD------------ATVKLWDLRN 236 (383)
T ss_dssp SCTTEEEEEETT------------SEEEEEEGGG
T ss_pred CCCCEEEEEeCC------------CEEEEEeCCC
Confidence 333 67777643 3588888876
No 180
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=87.88 E-value=5.4 Score=41.57 Aligned_cols=115 Identities=8% Similarity=0.031 Sum_probs=66.1
Q ss_pred EEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCCCc
Q 013179 25 AVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGD 103 (448)
Q Consensus 25 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~~~ 103 (448)
.+...++.|+++||.. +-+++||+.++++..+... ..+....-.+++.. ++.|++- .. .-
T Consensus 477 i~~d~~g~lWi~~~t~-----~Gl~~~d~~~~~~~~~~~~-------~~~~~~~~~~i~~d~~g~lWig-t~------~G 537 (758)
T 3ott_A 477 IIPDNEGNVWVLLYNN-----KGIDKINPRTREVTKLFAD-------ELTGEKSPNYLLCDEDGLLWVG-FH------GG 537 (758)
T ss_dssp EEECTTSCEEEEETTC-----SSEEEEETTTTEEEEECTT-------TSCGGGCEEEEEECTTSCEEEE-ET------TE
T ss_pred EEEcCCCCEEEEccCC-----CCcEEEeCCCCceEEecCC-------CcCCCcccceEEECCCCCEEEE-ec------Cc
Confidence 3444667898876653 2389999999998876421 11111112233333 4677764 32 13
Q ss_pred EEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEee
Q 013179 104 FWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQL 168 (448)
Q Consensus 104 ~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~ 168 (448)
+.+||+.+.+++.... ..+|.. ..++++. .++.|++-.. +.+.+||+.+.+....
T Consensus 538 l~~~~~~~~~~~~~~~-~gl~~~-~i~~i~~-~~g~lWi~t~-------~Gl~~~~~~~~~~~~~ 592 (758)
T 3ott_A 538 VMRINPKDESQQSISF-GSFSNN-EILSMTC-VKNSIWVSTT-------NGLWIIDRKTMDARQQ 592 (758)
T ss_dssp EEEECC--CCCCBCCC-CC---C-CEEEEEE-ETTEEEEEES-------SCEEEEETTTCCEEEC
T ss_pred eEEEecCCCceEEecc-cCCCcc-ceEEEEE-CCCCEEEECC-------CCeEEEcCCCceeEEe
Confidence 8999999888766542 234432 2233333 3668887652 4589999999887765
No 181
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=87.73 E-value=12 Score=31.94 Aligned_cols=152 Identities=15% Similarity=0.301 Sum_probs=77.4
Q ss_pred eEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeec---CCCCCCcCcccEEEEE-CCcEEEEEecCCCCccCCceE
Q 013179 81 IAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTS---FGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVY 156 (448)
Q Consensus 81 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~---~~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~ 156 (448)
+++..++++|+|=| ..+|+++.....+..... -..+|... -++... .++++|+|=| +.+|
T Consensus 28 Ai~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~~i--DAa~~~~~~~~iyfFkG-------~~~w 91 (207)
T 1pex_A 28 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPNRI--DAAYEHPSHDLIFIFRG-------RKFW 91 (207)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCSSC--CEEEEETTTTEEEEEET-------TEEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCCCc--cEEEEeccCCcEEEEcc-------CEEE
Confidence 44567999999966 248888775544432221 02355322 233333 2569999976 3467
Q ss_pred EEeCCCCce---EeecCCCCCCCc--cCCceeEEe--CCEEEEEcccCCCCCccCceeeecccccccCCCCceE-----E
Q 013179 157 VLDTISLEW---MQLPVTGSVPPP--RCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT-----Q 224 (448)
Q Consensus 157 ~yd~~t~~W---~~~~~~~~~p~~--r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~-----~ 224 (448)
+|+-.+..- +.|... .+|.. ... ++... ++++|+|-|.. .| +||..+++-. .
T Consensus 92 ~~~~~~~~~gyPk~I~~~-GlP~~~~~ID-AA~~~~~~gk~yfFkG~~--------yw------r~d~~~~~~d~gyPr~ 155 (207)
T 1pex_A 92 ALNGYDILEGYPKKISEL-GLPKEVKKIS-AAVHFEDTGKTLLFSGNQ--------VW------RYDDTNHIMDKDYPRL 155 (207)
T ss_dssp EESTTCCCTTCSEESTTT-TCCTTCCCCC-EEEECTTTSEEEEEETTE--------EE------EEETTTTEECSSCCCB
T ss_pred EEeCCeeccCCceecccc-CCCCCCcccc-EEEEeCCCCEEEEEeCCE--------EE------EEeCcCccccCCCCcc
Confidence 776322110 122211 12321 222 23222 47999998732 22 3344433211 0
Q ss_pred ec--CCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEE
Q 013179 225 LK--LPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR 281 (448)
Q Consensus 225 ~~--~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 281 (448)
+. -+ .+|. .. .+|...++++|.|-| +..|+||..+++-..
T Consensus 156 i~~~~~-Gip~-~i-DaAf~~~g~~YfFkg--------------~~y~rf~~~~~~v~~ 197 (207)
T 1pex_A 156 IEEDFP-GIGD-KV-DAVYEKNGYIYFFNG--------------PIQFEYSIWSNRIVR 197 (207)
T ss_dssp HHHHST-TSCS-CC-SEEEEETTEEEEEET--------------TEEEEEETTTTEEEE
T ss_pred HHHcCC-CCCC-Cc-cEEEEcCCcEEEEEC--------------CEEEEEeCCccEEec
Confidence 00 01 1221 22 244456889999976 468999987766443
No 182
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=87.61 E-value=19 Score=34.03 Aligned_cols=194 Identities=16% Similarity=0.155 Sum_probs=106.3
Q ss_pred CCCCCcceeEEEECCeEEEEcccCCCCCCCcEEE--EE----CCCCcEEEeecCCCCCCcCcccE---EEEECCcEEEEE
Q 013179 73 GPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWV--LD----TDIWQWSELTSFGDLPSPRDFAA---ASAIGNRKIVMY 143 (448)
Q Consensus 73 ~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~--~d----~~t~~W~~~~~~~~~p~~r~~~~---~~~~~~~~iyv~ 143 (448)
.|..-.-|+.+.+++.-|.+|=.+++-....+=. |. .....-.+. +|......+ ++-..++.+|+.
T Consensus 280 i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~-----i~sey~~~AsEPCvkyYdgvLyLt 354 (670)
T 3ju4_A 280 IPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQ-----IPSEYEPDASEPCIKYYDGVLYLI 354 (670)
T ss_dssp CTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEE-----CCGGGCTTEEEEEEEEETTEEEEE
T ss_pred ccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeee-----chhhhccccccchhhhhCCEEEEE
Confidence 4556667999999998899986665443333322 21 111111221 233222222 222346799997
Q ss_pred e-cCCCCccCCceEEEeCCCCceEeecCCCCCCCcc--CCceeEEeCCEEEEEcccCCCCC----ccCc---------ee
Q 013179 144 G-GWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPR--CGHTATMVEKRLLIYGGRGGGGP----IMGD---------LW 207 (448)
Q Consensus 144 G-G~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r--~~~~~~~~~~~lyv~GG~~~~~~----~~~d---------~~ 207 (448)
- |..+...-+.+.+-+..-.+|+.+.. |... ...-.+.+++.||+||-....+. ..++ ++
T Consensus 355 TRgt~~~~~GS~L~rs~d~Gq~w~slrf----p~nvHhtnlPFakvgD~l~mFgsERA~nEWE~G~pD~RY~a~yPRtF~ 430 (670)
T 3ju4_A 355 TRGTRGDRLGSSLHRSRDIGQTWESLRF----PHNVHHTTLPFAKVGDDLIMFGSERAENEWEAGAPDDRYKASYPRTFY 430 (670)
T ss_dssp EEESCTTSCCCEEEEESSTTSSCEEEEC----TTCCCSSCCCEEEETTEEEEEEECSSTTCSSTTCCCCCSSCBCCEEEE
T ss_pred ecCcCCCCCcceeeeecccCCchhheec----cccccccCCCcceeCCEEEEEeccccccccccCCCcccccccCCceEE
Confidence 5 44555556778888888999999963 3222 22234567999999997543211 1111 11
Q ss_pred eecccccccCCCCceEEecCC---CCCC-CCCceeEEEEeCCEE-EEEcCCCCC----------CCcccccceeCcEEEE
Q 013179 208 ALKGLIEEENETPGWTQLKLP---GQAP-SSRCGHTITSGGHYL-LLFGGHGTG----------GWLSRYDIYYNDTIIL 272 (448)
Q Consensus 208 ~~~~~~~yd~~~~~W~~~~~~---g~~p-~~r~~~~~~~~~~~i-~v~GG~~~~----------~~~~~~~~~~~~v~~y 272 (448)
.--.+..+..+.-+|..+... |..- .+..--+.|+.++.| |||||.+-- +.....+....|+|+|
T Consensus 431 ~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd~~np~s~gdN~~k~~~~~~Ghp~dlY~~ 510 (670)
T 3ju4_A 431 ARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGEDHFNPWTYGDNSAKDPFKSDGHPSDLYCY 510 (670)
T ss_dssp EEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBCSCCCCTTTTTTTCCTTSTTCCCCEEEEE
T ss_pred EEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcccCCccccccccccCccccCCCCcceEEE
Confidence 112344556677888877532 3322 333333566677765 488884321 1011123355688888
Q ss_pred EcC
Q 013179 273 DRL 275 (448)
Q Consensus 273 d~~ 275 (448)
-+.
T Consensus 511 ri~ 513 (670)
T 3ju4_A 511 KMK 513 (670)
T ss_dssp EEE
T ss_pred EEE
Confidence 753
No 183
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=87.45 E-value=20 Score=34.03 Aligned_cols=64 Identities=6% Similarity=-0.103 Sum_probs=31.6
Q ss_pred EEEEcccCCCCCCCcEEEEECCCC---cEEEeecCCCC-CCcCcccEEEEEC-CcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 89 MFIFGGRFGSRRLGDFWVLDTDIW---QWSELTSFGDL-PSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 89 lyv~GG~~~~~~~~~~~~~d~~t~---~W~~~~~~~~~-p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
+++.|+.++ .+..+|+.+. .+..... ... .....-++++... ++.+++.|+.+ ..+..||+.+.
T Consensus 196 ~l~s~~~dg-----~i~vwd~~~~~~~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~ 264 (430)
T 2xyi_A 196 YLLSASDDH-----TICLWDINATPKEHRVIDAK-NIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNN 264 (430)
T ss_dssp EEEEECTTS-----CEEEEETTSCCBGGGEEECS-EEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCS
T ss_pred eEEEEeCCC-----eEEEEeCCCCCCCCceeccc-eeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCC
Confidence 677776543 4888888762 1211100 001 1111122223222 44677777643 34788998765
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.41 E-value=6.4 Score=36.56 Aligned_cols=109 Identities=13% Similarity=0.090 Sum_probs=59.4
Q ss_pred CceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCC
Q 013179 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPS 125 (448)
Q Consensus 46 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~ 125 (448)
..++.+|+...++..+... .+.....+.+..-+++.+++...........++++|+.+++...+.. .+.
T Consensus 216 ~~l~~~d~~~~~~~~l~~~--------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~---~~~ 284 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKEH--------AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV---MPP 284 (396)
T ss_dssp CCCEEEETTSCCCEESSCC--------CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE---CCS
T ss_pred ceEEEEECCCCceeEeecc--------CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee---CCC
Confidence 5799999988877665420 01111112222224543333333222222349999999988877763 332
Q ss_pred cCcccEEEEEC-CcEEEEEecCCC-----------CccCCceEEEeCCCCceEeec
Q 013179 126 PRDFAAASAIG-NRKIVMYGGWDG-----------KKWLSDVYVLDTISLEWMQLP 169 (448)
Q Consensus 126 ~r~~~~~~~~~-~~~iyv~GG~~~-----------~~~~~~v~~yd~~t~~W~~~~ 169 (448)
+..+... +++++++.+.+. ......++.+|+.+.+...+.
T Consensus 285 ----~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 285 ----CSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp ----EEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEE
T ss_pred ----CCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEcc
Confidence 1133334 566666654321 012356999999988877664
No 185
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=87.33 E-value=16 Score=32.66 Aligned_cols=63 Identities=13% Similarity=0.115 Sum_probs=34.4
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE--C--CeEEEEcccCCCCCCCcEEE
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--D--CHMFIFGGRFGSRRLGDFWV 106 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~--~~lyv~GG~~~~~~~~~~~~ 106 (448)
+.+++.|+.++ .+.++|+.+++|..+.... .... .-.++.+ + +.+++.|+.++ .+..
T Consensus 67 g~~l~s~s~D~-----~v~iWd~~~~~~~~~~~~~-------~h~~--~v~~v~~~p~~~g~~l~s~s~d~-----~v~~ 127 (297)
T 2pm7_B 67 GTILASCSYDG-----KVMIWKEENGRWSQIAVHA-------VHSA--SVNSVQWAPHEYGPMLLVASSDG-----KVSV 127 (297)
T ss_dssp CSEEEEEETTT-----EEEEEEBSSSCBCCCEEEC-------CCSS--CEEEEEECCGGGCSEEEEEETTS-----EEEE
T ss_pred CCEEEEEcCCC-----EEEEEEcCCCceEEEEEee-------cCCC--ceeEEEeCcCCCCcEEEEEECCC-----cEEE
Confidence 45777777643 4778899888775544321 1111 1112222 2 45666776543 4677
Q ss_pred EECCCC
Q 013179 107 LDTDIW 112 (448)
Q Consensus 107 ~d~~t~ 112 (448)
+|+.+.
T Consensus 128 wd~~~~ 133 (297)
T 2pm7_B 128 VEFKEN 133 (297)
T ss_dssp EEBCSS
T ss_pred EEecCC
Confidence 777654
No 186
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=86.68 E-value=16 Score=33.07 Aligned_cols=65 Identities=12% Similarity=0.008 Sum_probs=37.7
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEE--EECCeEEEEcccCCCCCCCcEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAV--AIDCHMFIFGGRFGSRRLGDFWV 106 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~--~~~~~lyv~GG~~~~~~~~~~~~ 106 (448)
.++..++.|+.+ ..+.+||+.+.+...+.. ........+. .-++.+++.|+.++ .+..
T Consensus 96 ~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~l~~~~~dg-----~i~v 155 (368)
T 3mmy_A 96 DDGSKVFTASCD-----KTAKMWDLSSNQAIQIAQ----------HDAPVKTIHWIKAPNYSCVMTGSWDK-----TLKF 155 (368)
T ss_dssp TTSSEEEEEETT-----SEEEEEETTTTEEEEEEE----------CSSCEEEEEEEECSSCEEEEEEETTS-----EEEE
T ss_pred cCCCEEEEEcCC-----CcEEEEEcCCCCceeecc----------ccCceEEEEEEeCCCCCEEEEccCCC-----cEEE
Confidence 345566666653 358889999887655431 1111222222 23557777777553 4888
Q ss_pred EECCCCc
Q 013179 107 LDTDIWQ 113 (448)
Q Consensus 107 ~d~~t~~ 113 (448)
||+.+.+
T Consensus 156 wd~~~~~ 162 (368)
T 3mmy_A 156 WDTRSSN 162 (368)
T ss_dssp ECSSCSS
T ss_pred EECCCCc
Confidence 8887765
No 187
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=86.32 E-value=19 Score=32.62 Aligned_cols=232 Identities=10% Similarity=-0.035 Sum_probs=109.6
Q ss_pred CceEEEEcCCCcEEeeeecCCCC-----CCC---C-CCCCCcceeEEEE--CCeEEEEcccCCCCCCCcEEEEECCCCcE
Q 013179 46 SDVVVYDIDNKLWFQPECTGNGS-----NGQ---V-GPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLDTDIWQW 114 (448)
Q Consensus 46 ~~~~~yd~~~~~W~~~~~~~~~~-----~~~---~-~p~~R~~h~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~~W 114 (448)
..+++||+.+++++.+....... ++. . .+....-+.++.. +++|||.-.. ..+.++|+.++..
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~ 113 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY------YHLSVVGSEGGHA 113 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT------TEEEEECTTCEEC
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC------CCEEEEeCCCCEE
Confidence 45889999888776554221000 000 0 0000112444554 5789987322 2388999987766
Q ss_pred EEeecCCCCCCcCcccEEEEEC-CcEEEEEecCCC------------CccCCceEEEeCCCCceEeecCCCCCCCccCCc
Q 013179 115 SELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDG------------KKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH 181 (448)
Q Consensus 115 ~~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~------------~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~ 181 (448)
+.+...........-..+++.. ++.||+.-.... ......+++||+.+.+.+.+.. .+ ..-.
T Consensus 114 ~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--~~---~~p~ 188 (322)
T 2fp8_A 114 TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK--EL---HVPG 188 (322)
T ss_dssp EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE--EE---SCCC
T ss_pred EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc--CC---ccCc
Confidence 6554210000011123344445 678998642210 0112469999998887665431 11 1112
Q ss_pred eeEEe-C-CEEEEEcccCCCCCccCceeeecccccccCCC---CceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCC
Q 013179 182 TATMV-E-KRLLIYGGRGGGGPIMGDLWALKGLIEEENET---PGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGT 255 (448)
Q Consensus 182 ~~~~~-~-~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~---~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~ 255 (448)
.++.. + +.|||.-... ..+.+|++.+ ...+.+. ..+. -..+++ .++.|||......
T Consensus 189 gia~~~dg~~lyv~d~~~------------~~I~~~~~~~~~~~~~~~~~---~~~g---P~gi~~d~~G~l~va~~~~~ 250 (322)
T 2fp8_A 189 GAEVSADSSFVLVAEFLS------------HQIVKYWLEGPKKGTAEVLV---KIPN---PGNIKRNADGHFWVSSSEEL 250 (322)
T ss_dssp EEEECTTSSEEEEEEGGG------------TEEEEEESSSTTTTCEEEEE---ECSS---EEEEEECTTSCEEEEEEEET
T ss_pred ceEECCCCCEEEEEeCCC------------CeEEEEECCCCcCCccceEE---eCCC---CCCeEECCCCCEEEEecCcc
Confidence 23333 3 3577764321 2234445543 2333332 1121 223444 3457888753210
Q ss_pred CCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEcc
Q 013179 256 GGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGG 309 (448)
Q Consensus 256 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG 309 (448)
... ........+++||+....-..+......+ .....+++.-+++|||..-
T Consensus 251 ~~~--~~~~~~~~v~~~d~~G~~~~~~~~~~g~~-~~~~~~~~~~~g~L~v~~~ 301 (322)
T 2fp8_A 251 DGN--MHGRVDPKGIKFDEFGNILEVIPLPPPFA-GEHFEQIQEHDGLLYIGTL 301 (322)
T ss_dssp TSS--TTSCEEEEEEEECTTSCEEEEEECCTTTT-TSCCCEEEEETTEEEEECS
T ss_pred ccc--ccCCCccEEEEECCCCCEEEEEECCCCCc-cccceEEEEeCCEEEEeec
Confidence 000 00011356899999765555554321111 1223334445789988753
No 188
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=86.00 E-value=22 Score=33.13 Aligned_cols=68 Identities=6% Similarity=-0.026 Sum_probs=36.9
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEE-eeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWF-QPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~ 107 (448)
.++.+++.|+.+ ..+.+||+.+.+-. .+. .........+..-++..++.|+.++ .+..+
T Consensus 149 ~~~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~l~s~~~d~-----~v~iw 208 (420)
T 3vl1_A 149 PSGEALISSSQD-----MQLKIWSVKDGSNPRTLI----------GHRATVTDIAIIDRGRNVLSASLDG-----TIRLW 208 (420)
T ss_dssp TTSSEEEEEETT-----SEEEEEETTTCCCCEEEE----------CCSSCEEEEEEETTTTEEEEEETTS-----CEEEE
T ss_pred CCCCEEEEEeCC-----CeEEEEeCCCCcCceEEc----------CCCCcEEEEEEcCCCCEEEEEcCCC-----cEEEe
Confidence 445666777654 24888898876421 111 1111122222223566667777553 48888
Q ss_pred ECCCCcEEE
Q 013179 108 DTDIWQWSE 116 (448)
Q Consensus 108 d~~t~~W~~ 116 (448)
|+.+.+-..
T Consensus 209 d~~~~~~~~ 217 (420)
T 3vl1_A 209 ECGTGTTIH 217 (420)
T ss_dssp ETTTTEEEE
T ss_pred ECCCCceeE
Confidence 988776443
No 189
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=85.91 E-value=24 Score=33.48 Aligned_cols=18 Identities=17% Similarity=0.233 Sum_probs=14.9
Q ss_pred CCcEEEEECCcEEEEEcC
Q 013179 21 SGHSAVNIGKSKVVVFGG 38 (448)
Q Consensus 21 ~~~~~~~~~~~~iyv~GG 38 (448)
..|++++..++.||.+|-
T Consensus 130 ~~h~~alt~~G~v~~wG~ 147 (406)
T 4d9s_A 130 DSHCLAVTMEGEVQSWGR 147 (406)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred hhheEEEcCCCcEEEeCC
Confidence 468888888899999994
No 190
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=85.80 E-value=20 Score=32.32 Aligned_cols=120 Identities=8% Similarity=0.038 Sum_probs=68.1
Q ss_pred CCCCCCCcEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcc
Q 013179 16 VPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGG 94 (448)
Q Consensus 16 ~P~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG 94 (448)
+|.....+..++..++.||+.--. ...+++||+.... ...... + ..-+.++.. +++||+...
T Consensus 28 ~p~~~~pegia~~~~g~lyv~d~~-----~~~I~~~d~~g~~-~~~~~~---------~--~~p~gia~~~dG~l~vad~ 90 (306)
T 2p4o_A 28 FPVNTFLENLASAPDGTIFVTNHE-----VGEIVSITPDGNQ-QIHATV---------E--GKVSGLAFTSNGDLVATGW 90 (306)
T ss_dssp ECTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTTCCE-EEEEEC---------S--SEEEEEEECTTSCEEEEEE
T ss_pred CCCCCCcceEEECCCCCEEEEeCC-----CCeEEEECCCCce-EEEEeC---------C--CCceeEEEcCCCcEEEEec
Confidence 343344444555455778887532 2458999988653 222111 1 122334333 567888753
Q ss_pred cCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 95 RFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 95 ~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
... ...+++||+.+++.+.+.. .+..+.....+...++.+|+.-- ....+|++|+.+.
T Consensus 91 ~~~---~~~v~~~d~~~g~~~~~~~---~~~~~~~~g~~~~~~~~~~v~d~-----~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 91 NAD---SIPVVSLVKSDGTVETLLT---LPDAIFLNGITPLSDTQYLTADS-----YRGAIWLIDVVQP 148 (306)
T ss_dssp CTT---SCEEEEEECTTSCEEEEEE---CTTCSCEEEEEESSSSEEEEEET-----TTTEEEEEETTTT
T ss_pred cCC---cceEEEEcCCCCeEEEEEe---CCCccccCcccccCCCcEEEEEC-----CCCeEEEEeCCCC
Confidence 221 1248899999988877664 44455544555555557777532 1246899998764
No 191
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=85.66 E-value=7.1 Score=35.42 Aligned_cols=69 Identities=12% Similarity=0.061 Sum_probs=42.4
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCc-EEEEEecCCCCccCCceEEEeCCCCc
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
++++|+.++.. ..++++|+.+++...... .+....-+..+...++ .+|+.+.. ...++.||+.+.+
T Consensus 10 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 10 GHEYMIVTNYP-----NNLHVVDVASDTVYKSCV---MPDKFGPGTAMMAPDNRTAYVLNNH-----YGDIYGIDLDTCK 76 (349)
T ss_dssp TCEEEEEEETT-----TEEEEEETTTTEEEEEEE---CSSCCSSCEEEECTTSSEEEEEETT-----TTEEEEEETTTTE
T ss_pred CCEEEEEeCCC-----CeEEEEECCCCcEEEEEe---cCCCCCCceeEECCCCCEEEEEeCC-----CCcEEEEeCCCCc
Confidence 56788877643 358999999987654432 2221122344444444 57777632 2458999998877
Q ss_pred eEe
Q 013179 165 WMQ 167 (448)
Q Consensus 165 W~~ 167 (448)
-..
T Consensus 77 ~~~ 79 (349)
T 1jmx_B 77 NTF 79 (349)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 192
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=85.64 E-value=18 Score=31.85 Aligned_cols=149 Identities=9% Similarity=0.060 Sum_probs=69.8
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCce
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (448)
++..++.|+.++ .+..||... -..... .+......+++...++. ++.|+.++ .+..||+.+.+-
T Consensus 154 ~~~~l~~~~~d~-----~i~i~d~~~--~~~~~~---~~~~~~i~~~~~~~~~~-~~~~~~dg-----~i~i~d~~~~~~ 217 (313)
T 3odt_A 154 SENKFLTASADK-----TIKLWQNDK--VIKTFS---GIHNDVVRHLAVVDDGH-FISCSNDG-----LIKLVDMHTGDV 217 (313)
T ss_dssp TTTEEEEEETTS-----CEEEEETTE--EEEEEC---SSCSSCEEEEEEEETTE-EEEEETTS-----EEEEEETTTCCE
T ss_pred CCCEEEEEECCC-----CEEEEecCc--eEEEEe---ccCcccEEEEEEcCCCe-EEEccCCC-----eEEEEECCchhh
Confidence 566677776543 477788332 222111 11222223333444556 66666443 488899876653
Q ss_pred EeecCCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-eC
Q 013179 166 MQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GG 244 (448)
Q Consensus 166 ~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~ 244 (448)
...- .... ..-.++....+..++.|+.+ ..+..||+.+.+....- ..+.... .+++. .+
T Consensus 218 ~~~~---~~~~-~~i~~~~~~~~~~l~~~~~d------------g~v~iwd~~~~~~~~~~---~~~~~~i-~~~~~~~~ 277 (313)
T 3odt_A 218 LRTY---EGHE-SFVYCIKLLPNGDIVSCGED------------RTVRIWSKENGSLKQVI---TLPAISI-WSVDCMSN 277 (313)
T ss_dssp EEEE---ECCS-SCEEEEEECTTSCEEEEETT------------SEEEEECTTTCCEEEEE---ECSSSCE-EEEEECTT
T ss_pred hhhh---hcCC-ceEEEEEEecCCCEEEEecC------------CEEEEEECCCCceeEEE---eccCceE-EEEEEccC
Confidence 3221 1011 11122233322235555543 22445677766544332 1122222 23333 34
Q ss_pred CEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEec
Q 013179 245 HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLP 283 (448)
Q Consensus 245 ~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 283 (448)
+. ++.|+.+ ..+.+||+.+.++....
T Consensus 278 ~~-~~~~~~d------------g~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 278 GD-IIVGSSD------------NLVRIFSQEKSRWASED 303 (313)
T ss_dssp SC-EEEEETT------------SCEEEEESCGGGCCC--
T ss_pred CC-EEEEeCC------------CcEEEEeCCCCceeehh
Confidence 45 4455543 35889998887765443
No 193
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=85.51 E-value=21 Score=32.46 Aligned_cols=112 Identities=12% Similarity=0.037 Sum_probs=62.4
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECC
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTD 110 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~ 110 (448)
+.+|+.+-. -..+++||+.+++...+.. + ......+..-++++++... ..+++||+.
T Consensus 61 ~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~----------~-~~v~~i~~~~dg~l~v~~~-------~gl~~~d~~ 117 (326)
T 2ghs_A 61 GTAWWFNIL-----ERELHELHLASGRKTVHAL----------P-FMGSALAKISDSKQLIASD-------DGLFLRDTA 117 (326)
T ss_dssp TEEEEEEGG-----GTEEEEEETTTTEEEEEEC----------S-SCEEEEEEEETTEEEEEET-------TEEEEEETT
T ss_pred CEEEEEECC-----CCEEEEEECCCCcEEEEEC----------C-CcceEEEEeCCCeEEEEEC-------CCEEEEECC
Confidence 567776543 2458999999887655431 1 1122222334678777541 249999999
Q ss_pred CCcEEEeecCCC-CCCcCcccEEEEECCcEEEEEec-CCCCccCCceEEEeCCCCceEee
Q 013179 111 IWQWSELTSFGD-LPSPRDFAAASAIGNRKIVMYGG-WDGKKWLSDVYVLDTISLEWMQL 168 (448)
Q Consensus 111 t~~W~~~~~~~~-~p~~r~~~~~~~~~~~~iyv~GG-~~~~~~~~~v~~yd~~t~~W~~~ 168 (448)
+++.+.+..... .+..+ ....+...++++|+... .........+++|| +.+.+.+
T Consensus 118 ~g~~~~~~~~~~~~~~~~-~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNR-SNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp TCCEEEEECSSTTCTTEE-EEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred CCcEEEEeeCCCCCCCCC-CCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 999887753111 11111 22333445667877432 11112245689998 4666554
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=85.10 E-value=22 Score=32.22 Aligned_cols=192 Identities=14% Similarity=0.103 Sum_probs=93.3
Q ss_pred ccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCC
Q 013179 44 FLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL 123 (448)
Q Consensus 44 ~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~ 123 (448)
....+|.+|+.+++-..+. ........-+++.+++.....+.....+|.+|+.+++..++.. .
T Consensus 41 ~~~~l~~~d~~~~~~~~l~--------------~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~---~ 103 (347)
T 2gop_A 41 YENTIVIENLKNNARRFIE--------------NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE---A 103 (347)
T ss_dssp EEEEEEEEETTTCCEEEEE--------------SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE---E
T ss_pred ccceEEEEeCCCCceEEcc--------------cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc---C
Confidence 4567999999988755541 1112222224443444333221223469999999988877763 2
Q ss_pred CCcCcccEEEEECCc-EEEEEecC-----------------CCC----ccCCceEEEeCCCCce-EeecCCCCCCCccCC
Q 013179 124 PSPRDFAAASAIGNR-KIVMYGGW-----------------DGK----KWLSDVYVLDTISLEW-MQLPVTGSVPPPRCG 180 (448)
Q Consensus 124 p~~r~~~~~~~~~~~-~iyv~GG~-----------------~~~----~~~~~v~~yd~~t~~W-~~~~~~~~~p~~r~~ 180 (448)
+. ....+-..++ .|++.... ++. .....++.+|+.+++. ..+. . + ..
T Consensus 104 ~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~---~-~---~~ 173 (347)
T 2gop_A 104 KN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFE---K-P---RF 173 (347)
T ss_dssp SE---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEE---E-E---TT
T ss_pred CC---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeec---C-C---Cc
Confidence 21 2222222344 44444321 000 0135689999999887 6665 2 2 22
Q ss_pred ceeEEeCCEEEEEcccCCCCC--c-cCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCC-EEEEEcCCCCC
Q 013179 181 HTATMVEKRLLIYGGRGGGGP--I-MGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGH-YLLLFGGHGTG 256 (448)
Q Consensus 181 ~~~~~~~~~lyv~GG~~~~~~--~-~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~-~i~v~GG~~~~ 256 (448)
.......+.+++.+....... . ..++|. +| +.++..+.. . ...... .-++ .|+..+.....
T Consensus 174 ~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~------~d--~~~~~~l~~---~---~~~~~~-spdg~~l~~~~~~~~~ 238 (347)
T 2gop_A 174 SSGIWHRDKIVVNVPHREIIPQYFKFWDIYI------WE--DGKEEKMFE---K---VSFYAV-DSDGERILLYGKPEKK 238 (347)
T ss_dssp CEEEEETTEEEEEEECCCSSCCSSCCEEEEE------EE--TTEEEEEEE---E---ESEEEE-EECSSCEEEEECCSSS
T ss_pred ccccCCCCeEEEEEecccccccccccccEEE------eC--CCceEEecc---C---cceeeE-CCCCCEEEEEEccccC
Confidence 334444444554443332111 1 223443 35 566666642 1 111222 4344 44444322211
Q ss_pred CCcccccceeCcEEEEEcCCCceEEecc
Q 013179 257 GWLSRYDIYYNDTIILDRLSAQWKRLPI 284 (448)
Q Consensus 257 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 284 (448)
+ ......+|++| +.++..+..
T Consensus 239 ~-----~~~~~~l~~~d--~~~~~~l~~ 259 (347)
T 2gop_A 239 Y-----MSEHNKLYIYD--GKEVMGILD 259 (347)
T ss_dssp C-----CCSSCEEEEEC--SSCEEESST
T ss_pred C-----ccccceEEEEC--CCceEeccc
Confidence 0 11235799999 666766644
No 195
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=84.81 E-value=14 Score=33.30 Aligned_cols=70 Identities=14% Similarity=0.197 Sum_probs=36.3
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEEC--CeEEEEcccCCCCCCCcEEEEE
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAID--CHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~--~~lyv~GG~~~~~~~~~~~~~d 108 (448)
+.+++.|+.++ .+.++|+.+++|..+.... .........+..-+ +.+++.|+.++ .+..+|
T Consensus 71 ~~~l~s~s~D~-----~v~iWd~~~~~~~~~~~~~-------~h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd 133 (316)
T 3bg1_A 71 GNILASCSYDR-----KVIIWREENGTWEKSHEHA-------GHDSSVNSVCWAPHDYGLILACGSSDG-----AISLLT 133 (316)
T ss_dssp SSCEEEEETTS-----CEEEECCSSSCCCEEEEEC-------CCSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEE
T ss_pred CCEEEEEECCC-----EEEEEECCCCcceEEEEcc-------CCCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEe
Confidence 45666666543 4778888887775543221 11111111111122 45666776543 367777
Q ss_pred CCCC-cEEEe
Q 013179 109 TDIW-QWSEL 117 (448)
Q Consensus 109 ~~t~-~W~~~ 117 (448)
..+. .|...
T Consensus 134 ~~~~~~~~~~ 143 (316)
T 3bg1_A 134 YTGEGQWEVK 143 (316)
T ss_dssp ECSSSCEEEC
T ss_pred cCCCCCccee
Confidence 7664 46543
No 196
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=84.59 E-value=27 Score=32.89 Aligned_cols=96 Identities=16% Similarity=0.112 Sum_probs=51.2
Q ss_pred CceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCC
Q 013179 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPS 125 (448)
Q Consensus 46 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~ 125 (448)
+.|+++|..+++-..+-... .+.......++.-++++++.|+.++ .+..+|+.+++-..... ...
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~-------~~~~~V~sv~fspdg~~lasgs~Dg-----~v~iWd~~~~~~~~~~~---~h~ 189 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQME-------QPGEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMT---SHS 189 (420)
T ss_dssp TEEEEEETTTCCEEEEEECC-------STTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEEC---CCS
T ss_pred CEEEEEECCCCCEEEEEEec-------CCCCcEEEEEECCCCCEEEEEECCC-----eEEEEEcCCCcEEEEEe---CCC
Confidence 35999999998765543211 1111111222223567777887654 48899998876543321 112
Q ss_pred cCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 126 PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 126 ~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
.+ ..+... ++.+++.|+.+. .+..+|.....
T Consensus 190 ~~--v~~~s~-~~~~l~sgs~d~-----~i~~~d~~~~~ 220 (420)
T 4gga_A 190 AR--VGSLSW-NSYILSSGSRSG-----HIHHHDVRVAE 220 (420)
T ss_dssp SC--EEEEEE-ETTEEEEEETTS-----EEEEEETTSSS
T ss_pred Cc--eEEEee-CCCEEEEEeCCC-----ceeEeeecccc
Confidence 22 222233 346777776543 35666665543
No 197
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=84.45 E-value=38 Score=34.48 Aligned_cols=64 Identities=11% Similarity=0.092 Sum_probs=35.6
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
++++++.|+.++ .+.++|+.+.+-...-. ... ..-.+++...++..++.|+.++ .+..+|....
T Consensus 441 ~g~~l~sgs~Dg-----~v~vwd~~~~~~~~~~~---~h~-~~v~~~~~s~~~~~l~s~s~D~-----~i~iwd~~~~ 504 (694)
T 3dm0_A 441 DGQFALSGSWDG-----ELRLWDLAAGVSTRRFV---GHT-KDVLSVAFSLDNRQIVSASRDR-----TIKLWNTLGE 504 (694)
T ss_dssp TSSEEEEEETTS-----EEEEEETTTTEEEEEEE---CCS-SCEEEEEECTTSSCEEEEETTS-----CEEEECTTSC
T ss_pred CCCEEEEEeCCC-----cEEEEECCCCcceeEEe---CCC-CCEEEEEEeCCCCEEEEEeCCC-----EEEEEECCCC
Confidence 567777777553 48889998876433221 111 1112333334556677776554 3667776544
No 198
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=84.29 E-value=34 Score=35.11 Aligned_cols=126 Identities=13% Similarity=0.100 Sum_probs=65.6
Q ss_pred eEEEECCeEEEEcccCCCCCCCcEEEEECCCCc--EEEeecCCCC--CCc---CcccEEEEECCcEEEEEecCCCCccCC
Q 013179 81 IAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQ--WSELTSFGDL--PSP---RDFAAASAIGNRKIVMYGGWDGKKWLS 153 (448)
Q Consensus 81 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~--p~~---r~~~~~~~~~~~~iyv~GG~~~~~~~~ 153 (448)
+-++.++.||+.... ..++.+|..|++ |+.-...... +.. ....+.++. +++||+... -.
T Consensus 65 ~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~v~v~~~------dg 131 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPF------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW-KGKVYVGVL------DG 131 (689)
T ss_dssp CCEEETTEEEEECGG------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEEECT------TS
T ss_pred cCEEECCEEEEEcCC------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE-CCEEEEEcc------CC
Confidence 335679999998642 359999998775 8764321000 000 001122334 458877532 23
Q ss_pred ceEEEeCCCCc--eEeecCCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCc--eEEec
Q 013179 154 DVYVLDTISLE--WMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPG--WTQLK 226 (448)
Q Consensus 154 ~v~~yd~~t~~--W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~--W~~~~ 226 (448)
.++.+|..+++ |+.-.............+.++.++.+|+-.+....+ .. ..+..||.++.+ |+.-.
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~-~~------g~v~a~D~~tG~~~W~~~~ 201 (689)
T 1yiq_A 132 RLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFG-VR------GYVTAYDAETGKEAWRFYT 201 (689)
T ss_dssp EEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTC-CB------CEEEEEETTTCCEEEEEES
T ss_pred EEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccC-CC------CEEEEEECCCCcEEEEecc
Confidence 58999998765 876541001011122234456688887743321111 11 234456877665 87643
No 199
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=84.01 E-value=18 Score=35.89 Aligned_cols=98 Identities=16% Similarity=0.083 Sum_probs=56.4
Q ss_pred eEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcC
Q 013179 48 VVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPR 127 (448)
Q Consensus 48 ~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r 127 (448)
+..||+.+++-..+... +. ...++.-+++..++++..... ...++.+|+.+++++.+.. .+.
T Consensus 134 ~~l~d~~~g~~~~l~~~---------~~---~~~~~spDG~~la~~~~~~~~-~~~i~~~d~~~g~~~~l~~---~~~-- 195 (582)
T 3o4h_A 134 VALYALDGGGLRELARL---------PG---FGFVSDIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFDS---GEG-- 195 (582)
T ss_dssp EEEEEEETTEEEEEEEE---------SS---CEEEEEEETTEEEEEEEEETT-EEEEEEEETTTCCCEEECC---SSC--
T ss_pred ceEEEccCCcEEEeecC---------CC---ceEEECCCCCEEEEEEEcCCC-CeEEEEEcCCCCCceEeec---CCC--
Confidence 44779998887776532 11 223333455555555443211 1359999999999887753 111
Q ss_pred cccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceE
Q 013179 128 DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (448)
Q Consensus 128 ~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (448)
.....+...|++.++.+..++ ...++.+|+.+++..
T Consensus 196 ~~~~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 196 SFSSASISPGMKVTAGLETAR---EARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEEEECTTSCEEEEEECSS---CEEEEEECTTTCCEE
T ss_pred ccccceECCCCCEEEEccCCC---eeEEEEEcCCCCcEE
Confidence 112333334555444443322 246999999998887
No 200
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=83.81 E-value=41 Score=34.40 Aligned_cols=126 Identities=14% Similarity=0.151 Sum_probs=66.4
Q ss_pred eEEEECCeEEEEcccCCCCCCCcEEEEECCCCc--EEEeecCCC--CCCc---CcccEEEEECCcEEEEEecCCCCccCC
Q 013179 81 IAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQ--WSELTSFGD--LPSP---RDFAAASAIGNRKIVMYGGWDGKKWLS 153 (448)
Q Consensus 81 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~~~~~--~p~~---r~~~~~~~~~~~~iyv~GG~~~~~~~~ 153 (448)
+-++.++.||+.... +.++.+|..|++ |+.-..... .+.. ....+.++. +++||+... -.
T Consensus 72 ~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~-~~~v~v~~~------dg 138 (677)
T 1kb0_A 72 TPVVVDGIMYVSASW------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW-KGKVYVGAW------DG 138 (677)
T ss_dssp CCEEETTEEEEECGG------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE-TTEEEEECT------TS
T ss_pred CCEEECCEEEEECCC------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE-CCEEEEEcC------CC
Confidence 345679999998652 458999998875 876442100 0000 111223333 458887532 24
Q ss_pred ceEEEeCCCCc--eEeecCCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCc--eEEec
Q 013179 154 DVYVLDTISLE--WMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPG--WTQLK 226 (448)
Q Consensus 154 ~v~~yd~~t~~--W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~--W~~~~ 226 (448)
.++.+|..+++ |+.-.............+.++.++++|+-.+....+ .. ..+..||.++.+ |+.-.
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~-~~------g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYG-VR------GYITAYDAETGERKWRWFS 208 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTC-CB------CEEEEEETTTCCEEEEEES
T ss_pred EEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccC-CC------CEEEEEECCCCcEEEEecc
Confidence 58999998765 876431000011122234455688887754432111 11 234556876654 76644
No 201
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=83.45 E-value=25 Score=31.52 Aligned_cols=115 Identities=10% Similarity=-0.165 Sum_probs=59.9
Q ss_pred EEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEE-ECCeEEEEcccCCCCCCCcEEEEECC
Q 013179 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLDTD 110 (448)
Q Consensus 32 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~ 110 (448)
.||+.+-. .+.++.|++ +++.+.+.. +... -++.+. -+++||+.... ...+.+||+.
T Consensus 58 ~l~~~d~~-----~~~i~~~~~-~g~~~~~~~----------~~~~-~~gl~~d~dG~l~v~~~~-----~~~v~~~~~~ 115 (305)
T 3dr2_A 58 TLVWSDLV-----GRRVLGWRE-DGTVDVLLD----------ATAF-TNGNAVDAQQRLVHCEHG-----RRAITRSDAD 115 (305)
T ss_dssp EEEEEETT-----TTEEEEEET-TSCEEEEEE----------SCSC-EEEEEECTTSCEEEEETT-----TTEEEEECTT
T ss_pred EEEEEECC-----CCEEEEEeC-CCCEEEEeC----------CCCc-cceeeECCCCCEEEEECC-----CCEEEEECCC
Confidence 36665532 234888888 455444432 1111 122222 25678876321 1358889986
Q ss_pred CCcEEEeecCCCCCCcCcccEEEEECCcEEEEE----ecCCC--------CccCCceEEEeCCCCceEeec
Q 013179 111 IWQWSELTSFGDLPSPRDFAAASAIGNRKIVMY----GGWDG--------KKWLSDVYVLDTISLEWMQLP 169 (448)
Q Consensus 111 t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~----GG~~~--------~~~~~~v~~yd~~t~~W~~~~ 169 (448)
++.+.+...........-...++..++.||+. |-... ......+++||+.+++.+.+.
T Consensus 116 -g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 116 -GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp -SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred -CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 66666542100000111233445567789885 32210 112356999999888887764
No 202
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=83.18 E-value=44 Score=34.26 Aligned_cols=127 Identities=16% Similarity=0.058 Sum_probs=66.1
Q ss_pred ECCcEEEEEcCCCCCcccCceEEEEcCCCc--EEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEE
Q 013179 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKL--WFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFW 105 (448)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~ 105 (448)
+.+++||+... ...++.+|..+++ |+.-....... ...........+.++.+++||+-.. -..++
T Consensus 68 v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~v~v~~~------dg~l~ 134 (689)
T 1yiq_A 68 VVDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRHR-AGEACCDAVNRGVAVWKGKVYVGVL------DGRLE 134 (689)
T ss_dssp EETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGGG-GGGCTTCSCCCCCEEETTEEEEECT------TSEEE
T ss_pred EECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCccc-cccccccCCCCccEEECCEEEEEcc------CCEEE
Confidence 33488888664 2459999998874 87532110000 0000000011233556888887642 23589
Q ss_pred EEECCCCc--EEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc--eEee
Q 013179 106 VLDTDIWQ--WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQL 168 (448)
Q Consensus 106 ~~d~~t~~--W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~~ 168 (448)
.+|..|++ |+.-.............+.++. ++.+|+-.+.........++.||..+++ |+.-
T Consensus 135 AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 135 AIDAKTGQRAWSVDTRADHKRSYTITGAPRVV-NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEETTTCCEEEEEECCSCTTSCCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEECCCCCEeeeecCcCCCCCCccccCCcEEE-CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 99998875 8765420000001111223344 4577774322111233569999998876 8764
No 203
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=82.79 E-value=41 Score=33.62 Aligned_cols=105 Identities=12% Similarity=0.021 Sum_probs=55.0
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE--CCeEEEEcccCCCCCCCcEEEEE
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
+.+|+.... .+.+.++|+.+++-...- +....-|.++.. +.++|+.+. ...+.++|
T Consensus 167 ~~~~V~~~~-----~~~V~viD~~t~~v~~~i-----------~~g~~p~~v~~SpDGr~lyv~~~------dg~V~viD 224 (567)
T 1qks_A 167 NLFSVTLRD-----AGQIALIDGSTYEIKTVL-----------DTGYAVHISRLSASGRYLFVIGR------DGKVNMID 224 (567)
T ss_dssp GEEEEEETT-----TTEEEEEETTTCCEEEEE-----------ECSSCEEEEEECTTSCEEEEEET------TSEEEEEE
T ss_pred ceEEEEeCC-----CCeEEEEECCCCeEEEEE-----------eCCCCccceEECCCCCEEEEEcC------CCeEEEEE
Confidence 566666542 356999999998643221 222233444332 456787642 23699999
Q ss_pred CC--CCcEEEeecCCCCCCcCcccEEEEE-----CCcEEEEEecCCCCccCCceEEEeCCCCceEe
Q 013179 109 TD--IWQWSELTSFGDLPSPRDFAAASAI-----GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ 167 (448)
Q Consensus 109 ~~--t~~W~~~~~~~~~p~~r~~~~~~~~-----~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~ 167 (448)
+. +.+-. .. ++.+..-..++.. ..+.+|+..- ..+.+..+|..+.+=.+
T Consensus 225 ~~~~t~~~v--~~---i~~G~~P~~ia~s~~~~pDGk~l~v~n~-----~~~~v~ViD~~t~~~~~ 280 (567)
T 1qks_A 225 LWMKEPTTV--AE---IKIGSEARSIETSKMEGWEDKYAIAGAY-----WPPQYVIMDGETLEPKK 280 (567)
T ss_dssp TTSSSCCEE--EE---EECCSEEEEEEECCSTTCTTTEEEEEEE-----ETTEEEEEETTTCCEEE
T ss_pred CCCCCCcEe--EE---EecCCCCceeEEccccCCCCCEEEEEEc-----cCCeEEEEECCCCcEEE
Confidence 95 54322 21 2222222233333 2336666532 23557888977765443
No 204
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=82.66 E-value=33 Score=32.48 Aligned_cols=18 Identities=11% Similarity=0.084 Sum_probs=14.8
Q ss_pred cccEEEEECCcEEEEEec
Q 013179 128 DFAAASAIGNRKIVMYGG 145 (448)
Q Consensus 128 ~~~~~~~~~~~~iyv~GG 145 (448)
..|++++..++.+|..|-
T Consensus 182 ~~hs~alt~~G~v~~wG~ 199 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGW 199 (406)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEeCCCCEEEeeC
Confidence 458888888889999984
No 205
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=82.29 E-value=27 Score=31.77 Aligned_cols=65 Identities=14% Similarity=0.043 Sum_probs=43.0
Q ss_pred CeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceE
Q 013179 87 CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (448)
Q Consensus 87 ~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (448)
+.+|+.+-.. ..+++||+.+++...+. .+. .-.+.+...++++++... +.+++||+.+.+.+
T Consensus 61 ~~l~~~d~~~-----~~i~~~d~~~~~~~~~~----~~~--~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 61 GTAWWFNILE-----RELHELHLASGRKTVHA----LPF--MGSALAKISDSKQLIASD-------DGLFLRDTATGVLT 122 (326)
T ss_dssp TEEEEEEGGG-----TEEEEEETTTTEEEEEE----CSS--CEEEEEEEETTEEEEEET-------TEEEEEETTTCCEE
T ss_pred CEEEEEECCC-----CEEEEEECCCCcEEEEE----CCC--cceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEE
Confidence 5787776432 35999999998776554 222 223334445668877641 34999999999888
Q ss_pred eec
Q 013179 167 QLP 169 (448)
Q Consensus 167 ~~~ 169 (448)
.+.
T Consensus 123 ~~~ 125 (326)
T 2ghs_A 123 LHA 125 (326)
T ss_dssp EEE
T ss_pred EEe
Confidence 775
No 206
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=82.09 E-value=27 Score=32.81 Aligned_cols=150 Identities=13% Similarity=0.126 Sum_probs=78.3
Q ss_pred EEEEECCC--CcEEEeecCCCCCCcCcccEEEEEC--CcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCc--
Q 013179 104 FWVLDTDI--WQWSELTSFGDLPSPRDFAAASAIG--NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPP-- 177 (448)
Q Consensus 104 ~~~~d~~t--~~W~~~~~~~~~p~~r~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~-- 177 (448)
+++++... .+|+.+.+ .+.....++++... ++.||+.+.... .-..|++.+-...+|+++......+..
T Consensus 33 l~~~~~~~~g~~W~~~~~---~~~~~~v~~i~~dp~~~~~l~~g~~~g~--~g~gl~~s~D~G~tW~~~~~~~~~~~~~~ 107 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGP---VFLGHTIHHIVQDPREPERMLMAARTGH--LGPTVFRSDDGGGNWTEATRPPAFNKAPE 107 (394)
T ss_dssp EEEEEECTTSCSEEEEEE---ESTTSEEEEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCCCCCC-
T ss_pred eEEEECCCCCCCceECCc---cCCCCceEEEEECCCCCCeEEEEecCCC--CCccEEEeCCCCCCceECCccccCCCccc
Confidence 77787765 68998742 12222334444432 557888664211 012478887778899998632111211
Q ss_pred c-----CCc--eeEEe----CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCC--------------
Q 013179 178 R-----CGH--TATMV----EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAP-------------- 232 (448)
Q Consensus 178 r-----~~~--~~~~~----~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p-------------- 232 (448)
+ ..+ +++.. ++.||+.+-. ..+++.+-...+|+.+......|
T Consensus 108 ~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~-------------ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~ 174 (394)
T 3b7f_A 108 GETGRVVDHVFWLTPGHASEPGTWYAGTSP-------------QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTP 174 (394)
T ss_dssp ---CCCCCEEEEEEECCTTSTTCEEEEEET-------------TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----C
T ss_pred ccccccccceeEEEeCCCCCCCEEEEEecC-------------CcEEEEcCCCCCeEECcCccCCccccccccccccCCC
Confidence 1 111 22232 4567765421 11223366778899875210111
Q ss_pred CCCceeEEEEe---CCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEecc
Q 013179 233 SSRCGHTITSG---GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPI 284 (448)
Q Consensus 233 ~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 284 (448)
.....+++++. .+.||+.... ..+++.+-...+|+.+..
T Consensus 175 ~~~~i~~i~~d~~~~~~l~vg~~~-------------ggl~~s~DgG~tW~~~~~ 216 (394)
T 3b7f_A 175 DGPKMHSILVDPRDPKHLYIGMSS-------------GGVFESTDAGTDWKPLNR 216 (394)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEET-------------BEEEEESSTTSSCEECCT
T ss_pred CCCceeEEEECCCCCCEEEEEECC-------------CCEEEECCCCCCceECCC
Confidence 11223444443 3567765421 238888888899999854
No 207
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=81.97 E-value=25 Score=31.70 Aligned_cols=67 Identities=9% Similarity=0.152 Sum_probs=35.4
Q ss_pred eEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECC---cEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 88 HMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGN---RKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 88 ~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~---~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
++++.|+... .-..+..||..+++...... ......-.+++...+ +.+++.|+.++ .+..||+.+.+
T Consensus 32 ~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~ 101 (357)
T 3i2n_A 32 KFVTMGNFAR--GTGVIQLYEIQHGDLKLLRE---IEKAKPIKCGTFGATSLQQRYLATGDFGG-----NLHIWNLEAPE 101 (357)
T ss_dssp EEEEEEC--C--CCEEEEEEEECSSSEEEEEE---EEESSCEEEEECTTCCTTTCCEEEEETTS-----CEEEECTTSCS
T ss_pred eEEEecCccC--CCcEEEEEeCCCCcccceee---ecccCcEEEEEEcCCCCCCceEEEecCCC-----eEEEEeCCCCC
Confidence 5666665421 12358888998887655432 111111122222233 46777776543 37888887664
No 208
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=81.67 E-value=29 Score=31.09 Aligned_cols=69 Identities=16% Similarity=0.173 Sum_probs=39.4
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCc----EEEeecCCCCCCcCcccEEEEECCcE-EEEEecCCCCccCCceEEEeC
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQ----WSELTSFGDLPSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDT 160 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~----W~~~~~~~~~p~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~ 160 (448)
++.+++.|+.++ .+.+||..+.. -..+.. ....-.+++...++. .++.|+.++ .+..||+
T Consensus 22 ~~~~l~~~~~d~-----~v~iw~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~~wd~ 86 (342)
T 1yfq_A 22 SKSLLLITSWDG-----SLTVYKFDIQAKNVDLLQSLR-----YKHPLLCCNFIDNTDLQIYVGTVQG-----EILKVDL 86 (342)
T ss_dssp GGTEEEEEETTS-----EEEEEEEETTTTEEEEEEEEE-----CSSCEEEEEEEESSSEEEEEEETTS-----CEEEECS
T ss_pred CCCEEEEEcCCC-----eEEEEEeCCCCccccceeeee-----cCCceEEEEECCCCCcEEEEEcCCC-----eEEEEEe
Confidence 556666666443 47777776665 333221 111223333334556 777777543 4889999
Q ss_pred -CCCceEeec
Q 013179 161 -ISLEWMQLP 169 (448)
Q Consensus 161 -~t~~W~~~~ 169 (448)
.+..-..+.
T Consensus 87 ~~~~~~~~~~ 96 (342)
T 1yfq_A 87 IGSPSFQALT 96 (342)
T ss_dssp SSSSSEEECB
T ss_pred ccCCceEecc
Confidence 888766554
No 209
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=81.56 E-value=45 Score=33.28 Aligned_cols=77 Identities=12% Similarity=0.156 Sum_probs=43.0
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCC--cEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWV 106 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~ 106 (448)
.+++||+... -..++.+|..++ .|+.-... .........+.++.++.+|+-.+.........++.
T Consensus 114 ~~~~v~v~~~------dg~l~alD~~tG~~~W~~~~~~-------~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a 180 (571)
T 2ad6_A 114 GAGQIVKKQA------NGHLLALDAKTGKINWEVEVCD-------PKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNA 180 (571)
T ss_dssp ETTEEEEECT------TSEEEEEETTTCCEEEEEECCC-------GGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEE
T ss_pred ECCEEEEEeC------CCEEEEEECCCCCEEEEecCCC-------CCccceeccCCEEECCEEEEEecCCccCCCCEEEE
Confidence 3477887643 145999999888 48653210 00000122233456888877643211112346999
Q ss_pred EECCCCc--EEEee
Q 013179 107 LDTDIWQ--WSELT 118 (448)
Q Consensus 107 ~d~~t~~--W~~~~ 118 (448)
||+.|++ |+.-.
T Consensus 181 ~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 181 FDLKTGELKWRAFA 194 (571)
T ss_dssp EETTTCCEEEEEES
T ss_pred EECCCCcEEEEEcc
Confidence 9998775 76543
No 210
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=81.56 E-value=18 Score=36.00 Aligned_cols=154 Identities=12% Similarity=0.050 Sum_probs=73.8
Q ss_pred CeEEEEcccCCCCCCCcEEEEEC--CCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 87 CHMFIFGGRFGSRRLGDFWVLDT--DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 87 ~~lyv~GG~~~~~~~~~~~~~d~--~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
+++.+.+...+......+|..++ ....- ++.. .+..+ ..+.....+.++++.+... .+..||+.+.+
T Consensus 75 d~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~---~~~~~--~~~~s~dg~~~~~~s~~~~-----~~~l~d~~~g~ 143 (582)
T 3o4h_A 75 GRVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEA---VKPMR--ILSGVDTGEAVVFTGATED-----RVALYALDGGG 143 (582)
T ss_dssp SEEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTT---SCSBE--EEEEEECSSCEEEEEECSS-----CEEEEEEETTE
T ss_pred CeEEEEeccCCCCcceEEEEEeccCCCccc-cccC---CCCce--eeeeCCCCCeEEEEecCCC-----CceEEEccCCc
Confidence 35554444322223346788888 44332 3331 22222 2222333334555544322 23477888888
Q ss_pred eEeecCCCCCCCccCCceeEE-eCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE-
Q 013179 165 WMQLPVTGSVPPPRCGHTATM-VEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS- 242 (448)
Q Consensus 165 W~~~~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~- 242 (448)
-+.+. ..+. .+... -+++.+++++...... ..++.+|+++.++..+.. .+.. ....+.
T Consensus 144 ~~~l~---~~~~----~~~~~spDG~~la~~~~~~~~~--------~~i~~~d~~~g~~~~l~~---~~~~--~~~~~~S 203 (582)
T 3o4h_A 144 LRELA---RLPG----FGFVSDIRGDLIAGLGFFGGGR--------VSLFTSNLSSGGLRVFDS---GEGS--FSSASIS 203 (582)
T ss_dssp EEEEE---EESS----CEEEEEEETTEEEEEEEEETTE--------EEEEEEETTTCCCEEECC---SSCE--EEEEEEC
T ss_pred EEEee---cCCC----ceEEECCCCCEEEEEEEcCCCC--------eEEEEEcCCCCCceEeec---CCCc--cccceEC
Confidence 77775 2222 22222 3555555555432210 224455888888887752 1211 122233
Q ss_pred eCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEE
Q 013179 243 GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR 281 (448)
Q Consensus 243 ~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 281 (448)
-+++.++.+.... ...++++|+.+.+...
T Consensus 204 pDG~~l~~~~~~~----------~~~i~~~d~~~~~~~~ 232 (582)
T 3o4h_A 204 PGMKVTAGLETAR----------EARLVTVDPRDGSVED 232 (582)
T ss_dssp TTSCEEEEEECSS----------CEEEEEECTTTCCEEE
T ss_pred CCCCEEEEccCCC----------eeEEEEEcCCCCcEEE
Confidence 3444333332211 1469999998887773
No 211
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=81.06 E-value=28 Score=30.57 Aligned_cols=16 Identities=13% Similarity=0.189 Sum_probs=11.3
Q ss_pred CcEEEEEcCCCceEEe
Q 013179 267 NDTIILDRLSAQWKRL 282 (448)
Q Consensus 267 ~~v~~yd~~~~~W~~~ 282 (448)
..+.+||+.+.+....
T Consensus 246 g~v~iwd~~~~~~~~~ 261 (313)
T 3odt_A 246 RTVRIWSKENGSLKQV 261 (313)
T ss_dssp SEEEEECTTTCCEEEE
T ss_pred CEEEEEECCCCceeEE
Confidence 3589999888765443
No 212
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=80.95 E-value=44 Score=32.71 Aligned_cols=63 Identities=10% Similarity=-0.028 Sum_probs=32.3
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
+++.++.|+.++ .+..+|.....-..+.. ... .-.+++...+++.++.|+.++ .+..||....
T Consensus 355 ~g~~l~~~~~dg-----~v~~~~~~~~~~~~~~~---~~~--~v~~~~~s~dg~~l~~~~~d~-----~v~~~~~~~~ 417 (577)
T 2ymu_A 355 DGQTIASASDDK-----TVKLWNRNGQLLQTLTG---HSS--SVRGVAFSPDGQTIASASDDK-----TVKLWNRNGQ 417 (577)
T ss_dssp TSSEEEEEETTS-----EEEEEETTCCEEEEEEC---CSS--CEEEEEECTTSSCEEEEETTS-----EEEEECTTCC
T ss_pred CCCEEEEEeCCC-----EEEEEcCCCCEEEEecC---CCC--CeEEEEECCCCCEEEEEeCCC-----EEEEEeCCCC
Confidence 566667766443 36777865544444331 111 112233335556677776543 3677775443
No 213
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=80.48 E-value=25 Score=29.63 Aligned_cols=142 Identities=13% Similarity=0.169 Sum_probs=73.6
Q ss_pred EEEEECCcEEEEEcCCCCCcccCceEEEEcCC--CcEEeeeecCCCCCCCCCCCCCcceeEEEE--CCeEEEEcccCCCC
Q 013179 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDN--KLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSR 99 (448)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~--~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv~GG~~~~~ 99 (448)
+++.+ ++.+|+|=| +.+|+++... ........... =+.+|. .--|+... ++++|+|-|
T Consensus 11 Ai~~~-~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~---w~glP~--~IDAa~~~~~~~~~yfFkG----- 72 (195)
T 1itv_A 11 AIAEI-GNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADK---WPALPR--KLDSVFEEPLSKKLFFFSG----- 72 (195)
T ss_dssp EEEEE-TTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHH---CTTSCS--SCSEEEECTTTCCEEEEET-----
T ss_pred EEEEe-CCEEEEEEC-------CEEEEEECCccccCCCcEEhhhc---cCCCCC--CccEEEEECCCCeEEEEeC-----
Confidence 33334 478999887 3478887765 22322221100 012332 22334443 678999977
Q ss_pred CCCcEEEEECCCCcE-EEeecCCCCCCc--CcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEe-----ec-C
Q 013179 100 RLGDFWVLDTDIWQW-SELTSFGDLPSP--RDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ-----LP-V 170 (448)
Q Consensus 100 ~~~~~~~~d~~t~~W-~~~~~~~~~p~~--r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~-----~~-~ 170 (448)
+.+|+|+..+..- +.+..- .+|.. .-.. +..-.++++|+|-| +..|+||..+++-.. ++ .
T Consensus 73 --~~yw~~~~~~~~~Pk~i~~~-G~p~~~~~iDA-A~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~ 141 (195)
T 1itv_A 73 --RQVWVYTGASVLGPRRLDKL-GLGADVAQVTG-ALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRM 141 (195)
T ss_dssp --TEEEEEETTEEEEEEEGGGG-TCCTTCCCCCE-EEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHH
T ss_pred --CEEEEEcCCccCCCEEeeec-ccCCCccceeE-EEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhc
Confidence 3589998653221 111111 24432 2222 22245679999976 357999987654221 10 0
Q ss_pred CCCCCCccCCceeEEeCCEEEEEccc
Q 013179 171 TGSVPPPRCGHTATMVEKRLLIYGGR 196 (448)
Q Consensus 171 ~~~~p~~r~~~~~~~~~~~lyv~GG~ 196 (448)
=..+| ..-.++...++.+|.|-|.
T Consensus 142 w~Gvp--~~idaa~~~~g~~Yffkg~ 165 (195)
T 1itv_A 142 FPGVP--LDTHDVFQFREKAYFCQDR 165 (195)
T ss_dssp STTSC--SSCSEEEEETTEEEEEETT
T ss_pred CCCCC--CCCCEEEEeCCeEEEEeCC
Confidence 00222 2234555567999999874
No 214
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=79.38 E-value=54 Score=32.82 Aligned_cols=121 Identities=12% Similarity=0.104 Sum_probs=62.8
Q ss_pred ECCcEEEEEcCCCCCcccCceEEEEcCCCc--EEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEE
Q 013179 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKL--WFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFW 105 (448)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~ 105 (448)
+.+++||+.... +.++.+|.++++ |+.-...... ..+.......+.++.+++||+... ...++
T Consensus 66 v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~---~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~ 130 (582)
T 1flg_A 66 VSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDD---IRPCCDVVNRGAAIYGDKVFFGTL------DASVV 130 (582)
T ss_dssp EETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTT---CCCSSCSCCCCCEEETTEEEEEET------TTEEE
T ss_pred EECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcc---cccccccCCCccEEECCEEEEEeC------CCEEE
Confidence 344889987653 239999998874 8764322100 000000111234467888887531 23599
Q ss_pred EEECCCCc--EEEeecCCCCCCcC--cccEEEEECC---c--EEEEEecCCCC-ccCCceEEEeCCCCc--eEe
Q 013179 106 VLDTDIWQ--WSELTSFGDLPSPR--DFAAASAIGN---R--KIVMYGGWDGK-KWLSDVYVLDTISLE--WMQ 167 (448)
Q Consensus 106 ~~d~~t~~--W~~~~~~~~~p~~r--~~~~~~~~~~---~--~iyv~GG~~~~-~~~~~v~~yd~~t~~--W~~ 167 (448)
.+|..|++ |+.-.. .+... ...+.++.++ + .+| +|....+ .....++.||..+.+ |+.
T Consensus 131 AlD~~TG~~~W~~~~~---~~~~~~~~~~sP~v~~~~~~G~~~v~-vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 131 ALNKNTGKVVWKKKFA---DHGAGYTMTGAPTIVKDGKTGKVLLI-HGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEESSSCCEEEEEECS---CGGGTCBCCSCCEEEECTTTCCEEEE-ECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EEECCCCCEEeeecCC---CCCcCcccccCCEEeCCCcCCcEEEE-EeccccccCCCCEEEEEECCCCCEEeec
Confidence 99998885 876432 11111 1112223322 1 444 4432111 123568999998765 865
No 215
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=77.86 E-value=41 Score=30.61 Aligned_cols=51 Identities=8% Similarity=0.018 Sum_probs=24.9
Q ss_pred eEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCC
Q 013179 48 VVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDI 111 (448)
Q Consensus 48 ~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t 111 (448)
+|.+|..+++.+.+..... ....-.+.+. .++.||+.+... ..+.+|++.+
T Consensus 79 ~~~~~~~~g~~~~~~~~~~-------~~~~p~~~~~-dg~~l~~~~~~~-----~~v~~~~~~~ 129 (361)
T 3scy_A 79 AFAFDKEKGTLHLLNTQKT-------MGADPCYLTT-NGKNIVTANYSG-----GSITVFPIGQ 129 (361)
T ss_dssp EEEEETTTTEEEEEEEEEC-------SSSCEEEEEE-CSSEEEEEETTT-----TEEEEEEBCT
T ss_pred EEEEeCCCCcEEEeeEecc-------CCCCcEEEEE-CCCEEEEEECCC-----CEEEEEEeCC
Confidence 3555666677776654311 1111222222 344566654321 3477888764
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=77.84 E-value=48 Score=31.36 Aligned_cols=208 Identities=8% Similarity=-0.022 Sum_probs=104.6
Q ss_pred EEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCCC
Q 013179 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLG 102 (448)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~~ 102 (448)
.+++..++.||+.... ...+.++|+.++.-..+.... ...+.++.- ++.||+...... .
T Consensus 135 ~la~d~~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~-----------~~~~ia~~~~g~~l~~~d~~~~----~ 194 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGF-----------KGGKPAVTKDKQRVYSIGWEGT----H 194 (409)
T ss_dssp EEEECSTTEEEEEETT-----TTEEEEEETTTTEEEEEEETC-----------CBCBCEECTTSSEEEEEBSSTT----C
T ss_pred EEEEeCCCCEEEEecC-----CCcEEEEECCCCEEEEeeccC-----------CCCceeEecCCCcEEEEecCCC----c
Confidence 3444466789988752 245899999988766654321 112322222 345666643221 1
Q ss_pred cEEEEECCCCc-EEEeecCCCCCCcCcccEEEEEC-CcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCC
Q 013179 103 DFWVLDTDIWQ-WSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCG 180 (448)
Q Consensus 103 ~~~~~d~~t~~-W~~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~ 180 (448)
.++++|+.+.. ...+... ..+....-+.+++.. ++.||+.-. ...+++||+.+.....+...+........
T Consensus 195 ~I~~~d~~~~~~~~~~g~~-~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~ 267 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRIGQL-GSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTN 267 (409)
T ss_dssp EEEEEEGGGTTCEEEEEEC-CTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCS
T ss_pred eEEEEEcCCCceeEEeeec-cchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCC
Confidence 68999987653 2233110 010122224444444 679999321 23699999998876555211111111222
Q ss_pred -c-eeEEe--CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCC--------CC--CceeEEEE-eCC
Q 013179 181 -H-TATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAP--------SS--RCGHTITS-GGH 245 (448)
Q Consensus 181 -~-~~~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p--------~~--r~~~~~~~-~~~ 245 (448)
. .++.. ++.||+..... +.+.++|++.. ...+...+..+ .+ ..-..+++ .++
T Consensus 268 P~~~ia~~p~~g~lyv~d~~~------------~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG 334 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQNL------------SSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG 334 (409)
T ss_dssp SCCEEEEETTTTEEEEEETTT------------TEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC
T ss_pred ccccEEEeCCCCEEEEEeCCC------------CEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC
Confidence 1 44444 47899875321 23444566544 22221110000 01 11223444 345
Q ss_pred EEEEEcC-CCCCCCcccccceeCcEEEEEcCCCceEEec
Q 013179 246 YLLLFGG-HGTGGWLSRYDIYYNDTIILDRLSAQWKRLP 283 (448)
Q Consensus 246 ~i~v~GG-~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 283 (448)
.||+... .+ +.|.++|+.+.....+.
T Consensus 335 ~lyvad~~~~------------~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 335 NFYIVDGFKG------------YCLRKLDILDGYVSTVA 361 (409)
T ss_dssp CEEEEETTTT------------CEEEEEETTTTEEEEEE
T ss_pred CEEEEeCCCC------------CEEEEEECCCCEEEEEe
Confidence 7888853 22 46889997666655553
No 217
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=77.82 E-value=45 Score=31.01 Aligned_cols=93 Identities=12% Similarity=0.057 Sum_probs=50.2
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCce
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (448)
+++.++.|+.++ .+..+|+.+.+-...-. .. ...-.+++...++..++.|+.++ .+..||+.+.+.
T Consensus 134 dg~~l~s~~~d~-----~i~iwd~~~~~~~~~~~---~h-~~~v~~~~~~p~~~~l~s~s~d~-----~v~iwd~~~~~~ 199 (393)
T 1erj_A 134 DGKFLATGAEDR-----LIRIWDIENRKIVMILQ---GH-EQDIYSLDYFPSGDKLVSGSGDR-----TVRIWDLRTGQC 199 (393)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTTEEEEEEC---CC-SSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEE
T ss_pred CCCEEEEEcCCC-----eEEEEECCCCcEEEEEc---cC-CCCEEEEEEcCCCCEEEEecCCC-----cEEEEECCCCee
Confidence 567777777553 48899998876544321 11 11122333334556666776543 478889888765
Q ss_pred EeecCCCCCCCccCCceeEEe--CCEEEEEcccC
Q 013179 166 MQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRG 197 (448)
Q Consensus 166 ~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~ 197 (448)
...- .... .-.+++.. ++++++.|+.+
T Consensus 200 ~~~~---~~~~--~v~~~~~~~~~~~~l~~~s~d 228 (393)
T 1erj_A 200 SLTL---SIED--GVTTVAVSPGDGKYIAAGSLD 228 (393)
T ss_dssp EEEE---ECSS--CEEEEEECSTTCCEEEEEETT
T ss_pred EEEE---EcCC--CcEEEEEECCCCCEEEEEcCC
Confidence 4332 1111 11122222 46777777764
No 218
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=77.62 E-value=47 Score=31.16 Aligned_cols=18 Identities=11% Similarity=0.196 Sum_probs=14.9
Q ss_pred cccEEEEECCcEEEEEec
Q 013179 128 DFAAASAIGNRKIVMYGG 145 (448)
Q Consensus 128 ~~~~~~~~~~~~iyv~GG 145 (448)
..|++++..++++|..|-
T Consensus 168 ~~hs~alt~~G~v~~wG~ 185 (389)
T 3kci_A 168 GAHSACVTAAGDLYTWGK 185 (389)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred cCeEEEEeCCCeEEEeCC
Confidence 468888888889999994
No 219
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=77.61 E-value=41 Score=30.46 Aligned_cols=67 Identities=13% Similarity=0.062 Sum_probs=42.0
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCce
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (448)
++.+++.|+.++ .+..||+.+.+-..... ........+++...++.+++.|+.++ .+..||+.+.+-
T Consensus 138 ~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~~---~~~~~~i~~~~~~pdg~~lasg~~dg-----~i~iwd~~~~~~ 204 (343)
T 3lrv_A 138 NTEYFIWADNRG-----TIGFQSYEDDSQYIVHS---AKSDVEYSSGVLHKDSLLLALYSPDG-----ILDVYNLSSPDQ 204 (343)
T ss_dssp -CCEEEEEETTC-----CEEEEESSSSCEEEEEC---CCSSCCCCEEEECTTSCEEEEECTTS-----CEEEEESSCTTS
T ss_pred CCCEEEEEeCCC-----cEEEEECCCCcEEEEEe---cCCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCCC
Confidence 456777777554 48899998887654432 12222234444456678888887554 488899887754
No 220
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=76.60 E-value=46 Score=31.38 Aligned_cols=18 Identities=11% Similarity=0.134 Sum_probs=12.4
Q ss_pred EEEEecCCCCccCCceEEEeCCC
Q 013179 140 IVMYGGWDGKKWLSDVYVLDTIS 162 (448)
Q Consensus 140 iyv~GG~~~~~~~~~v~~yd~~t 162 (448)
+++.|+.++ .+..||+.+
T Consensus 196 ~l~s~~~dg-----~i~vwd~~~ 213 (430)
T 2xyi_A 196 YLLSASDDH-----TICLWDINA 213 (430)
T ss_dssp EEEEECTTS-----CEEEEETTS
T ss_pred eEEEEeCCC-----eEEEEeCCC
Confidence 677776544 378888876
No 221
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=76.30 E-value=37 Score=29.19 Aligned_cols=65 Identities=20% Similarity=0.323 Sum_probs=36.4
Q ss_pred eeEEEECCeEEEEcccCCCCCCCcEEEEECCCCc-EEE--eecC-CCCCCcCcccEEEEE-CCcEEEEEecCCCCccCCc
Q 013179 80 HIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQ-WSE--LTSF-GDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSD 154 (448)
Q Consensus 80 h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~-W~~--~~~~-~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~ 154 (448)
-|+...++++|+|=|. .+|+++..... ... +... ..+|.. .. ++... .++++|+|=| +.
T Consensus 34 DAi~~~~g~~~fFkg~-------~~Wr~~~~~~~~~~P~~I~~~wp~lp~~-ID-AA~~~~~~~k~yfFkG-------~~ 97 (218)
T 1gen_A 34 DGIAQIRGEIFFFKDR-------FIWRTVTPRDKPMGPLLVATFWPELPEK-ID-AVYEAPQEEKAVFFAG-------NE 97 (218)
T ss_dssp SEEEEETTEEEEEETT-------EEEEESSTTSCCEEEEEGGGTCTTSCSC-CS-EEEEETTTTEEEEEET-------TE
T ss_pred eEEEeCCCcEEEEECC-------EEEEEeCCCCccCCCEEHHHhcCCCCCC-cc-EEEEECCCCEEEEEeC-------CE
Confidence 3455679999999762 47777665422 221 2111 124432 22 23332 4569999976 45
Q ss_pred eEEEeC
Q 013179 155 VYVLDT 160 (448)
Q Consensus 155 v~~yd~ 160 (448)
.|+||-
T Consensus 98 yW~y~~ 103 (218)
T 1gen_A 98 YWIYSA 103 (218)
T ss_dssp EEEEET
T ss_pred EEEEcC
Confidence 788884
No 222
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=74.84 E-value=45 Score=29.58 Aligned_cols=107 Identities=9% Similarity=-0.080 Sum_probs=52.2
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..++.|+.+ ..+.+||+.+++-...- . .........++.-++.+++.|+.++ .+..+|
T Consensus 65 ~~~~~l~s~s~d-----~~i~vwd~~~~~~~~~~-~--------~h~~~v~~~~~~~~~~~l~sgs~D~-----~v~lWd 125 (304)
T 2ynn_A 65 ARKNWIIVGSDD-----FRIRVFNYNTGEKVVDF-E--------AHPDYIRSIAVHPTKPYVLSGSDDL-----TVKLWN 125 (304)
T ss_dssp GGGTEEEEEETT-----SEEEEEETTTCCEEEEE-E--------CCSSCEEEEEECSSSSEEEEEETTS-----CEEEEE
T ss_pred CCCCEEEEECCC-----CEEEEEECCCCcEEEEE-e--------CCCCcEEEEEEcCCCCEEEEECCCC-----eEEEEE
Confidence 445566777654 34788898877532211 1 1111111122222456677777553 477888
Q ss_pred CCCCcEEEeecCCCCCC-cCcccEEEEEC-CcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 109 TDIWQWSELTSFGDLPS-PRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~-~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
..++.= .... +.. ...-.+++... ++.+++.|+.++ .+..||+.+.
T Consensus 126 ~~~~~~-~~~~---~~~h~~~v~~v~~~p~~~~~l~sgs~D~-----~v~iwd~~~~ 173 (304)
T 2ynn_A 126 WENNWA-LEQT---FEGHEHFVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQS 173 (304)
T ss_dssp GGGTTE-EEEE---ECCCCSCEEEEEECTTCTTEEEEEETTS-----EEEEEETTCS
T ss_pred CCCCcc-hhhh---hcccCCcEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 876521 1111 111 11112222222 446777777654 3677887543
No 223
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=74.75 E-value=49 Score=29.89 Aligned_cols=162 Identities=9% Similarity=-0.045 Sum_probs=82.8
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCC----CCcC-cccEEEEECC-cEEEEEecCCCCccCCceEEEe
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL----PSPR-DFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLD 159 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~----p~~r-~~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd 159 (448)
++.||+..++. .+.+.+||+....-..+...+.. +... .-+.+++..+ +.|||.... .+.+.+||
T Consensus 154 ~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~-----~~~I~~~~ 224 (329)
T 3fvz_A 154 TGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE-----NGRIQCFK 224 (329)
T ss_dssp TCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT-----TTEEEEEE
T ss_pred CCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC-----CCEEEEEE
Confidence 57899997532 23588999665544444321111 1111 1234444444 799998643 24589999
Q ss_pred CCCCceEeecCCCCCCCccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeE
Q 013179 160 TISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHT 239 (448)
Q Consensus 160 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~ 239 (448)
+.+++....-.. ......-..++...+.+|+..|...-... .-..+..+|+.+.+....-..+ ......-++
T Consensus 225 ~~~G~~~~~~~~--~~~~~~~~~~~~~pg~~~~~~g~~~v~~~-----~~~~v~~~~~~~g~~~~~~~~~-~~~~~~p~~ 296 (329)
T 3fvz_A 225 TDTKEFVREIKH--ASFGRNVFAISYIPGFLFAVNGKPYFGDQ-----EPVQGFVMNFSSGEIIDVFKPV-RKHFDMPHD 296 (329)
T ss_dssp TTTCCEEEEECC--TTTTTCEEEEEEETTEEEEEECCCCTTCS-----CCCCEEEEETTTCCEEEEECCS-SSCCSSEEE
T ss_pred CCCCcEEEEEec--cccCCCcceeeecCCEEEEeCCCEEeccC-----CCcEEEEEEcCCCeEEEEEcCC-CCccCCeeE
Confidence 987766543211 11111112334445777877775321110 0123445676666655432110 111122234
Q ss_pred EEE-eCCEEEEEcCCCCCCCcccccceeCcEEEEEcCC
Q 013179 240 ITS-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLS 276 (448)
Q Consensus 240 ~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~ 276 (448)
+++ -++.|||....+ +.|++|+++.
T Consensus 297 ia~~~dG~lyvad~~~------------~~I~~~~~~~ 322 (329)
T 3fvz_A 297 IVASEDGTVYIGDAHT------------NTVWKFTLTE 322 (329)
T ss_dssp EEECTTSEEEEEESSS------------CCEEEEEEEE
T ss_pred EEECCCCCEEEEECCC------------CEEEEEeCCc
Confidence 444 355899886433 4688888754
No 224
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=73.82 E-value=48 Score=29.38 Aligned_cols=119 Identities=11% Similarity=0.036 Sum_probs=60.9
Q ss_pred EEEEECCc-EEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCC--CCcceeEEEE--CCeEEEEcccC--
Q 013179 24 SAVNIGKS-KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPG--PRAFHIAVAI--DCHMFIFGGRF-- 96 (448)
Q Consensus 24 ~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~--~R~~h~~~~~--~~~lyv~GG~~-- 96 (448)
.+.+..++ .+|+.+.. ...++++|+.+++-...-..+ .+. ...-+.++.. ++.||+.....
T Consensus 38 ~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 105 (337)
T 1pby_B 38 VPMVAPGGRIAYATVNK-----SESLVKIDLVTGETLGRIDLS-------TPEERVKSLFGAALSPDGKTLAIYESPVRL 105 (337)
T ss_dssp CEEECTTSSEEEEEETT-----TTEEEEEETTTCCEEEEEECC-------BTTEEEECTTCEEECTTSSEEEEEEEEEEE
T ss_pred ceEEcCCCCEEEEEeCC-----CCeEEEEECCCCCeEeeEEcC-------CcccccccccceEECCCCCEEEEEeccccc
Confidence 34444444 57776643 245999999988753321110 000 0011222222 34677764211
Q ss_pred -CCC---CCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCc-EEEEEecCCCCccCCceEEEeCCCCceEe
Q 013179 97 -GSR---RLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQ 167 (448)
Q Consensus 97 -~~~---~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~ 167 (448)
... ....++++|+.+.+....... +..-+.++...++ .||+.. ..++.+|+.+.+-..
T Consensus 106 ~~~~~~~~~~~i~v~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~--------~~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 106 ELTHFEVQPTRVALYDAETLSRRKAFEA-----PRQITMLAWARDGSKLYGLG--------RDLHVMDPEAGTLVE 168 (337)
T ss_dssp CSSCEEECCCEEEEEETTTTEEEEEEEC-----CSSCCCEEECTTSSCEEEES--------SSEEEEETTTTEEEE
T ss_pred ccccccccCceEEEEECCCCcEEEEEeC-----CCCcceeEECCCCCEEEEeC--------CeEEEEECCCCcEee
Confidence 011 235699999998876544321 1122333443344 466651 459999998877543
No 225
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=73.37 E-value=68 Score=30.96 Aligned_cols=153 Identities=11% Similarity=0.180 Sum_probs=76.6
Q ss_pred eEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecC---CCCCCcCcccEEEEE-CCcEEEEEecCCCCccCCceE
Q 013179 81 IAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSF---GDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVY 156 (448)
Q Consensus 81 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~---~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~ 156 (448)
+++..++++|+|=|. .+|+++.....+...... ..+|... -++... .++++|+|=| +.+|
T Consensus 267 Ai~~~~ge~y~Fkg~-------~~wr~~~~~~~~~p~~I~~~Wp~LP~~i--DAa~~~~~~g~~~fFKg-------~~~W 330 (450)
T 1su3_A 267 AITTIRGEVMFFKDR-------FYMRTNPFYPEVELNFISVFWPQLPNGL--EAAYEFADRDEVRFFKG-------NKYW 330 (450)
T ss_dssp EEEEETTEEEEEETT-------EEEECCTTSSSCEEEEGGGTCTTSCSSC--CEEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEecCCeEEEEeCC-------EEEEEcCCCCcccceehhHhccCCCCCe--eEEEEEcCCCeEEEEeC-------CEEE
Confidence 455689999999773 377777655444332211 1244322 223333 2568999966 2367
Q ss_pred EEeCCCC--ce-Eeec-CCCCCCC--ccCCceeEEe--CCEEEEEcccCCCCCccCceeeecccccccCCCCceE-----
Q 013179 157 VLDTISL--EW-MQLP-VTGSVPP--PRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT----- 223 (448)
Q Consensus 157 ~yd~~t~--~W-~~~~-~~~~~p~--~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~----- 223 (448)
+|+..+. .+ +.+. .. ..|. .... ++... ++++|+|-|.. .|.+ |..+.+-.
T Consensus 331 ~~~~~~~~~gyP~~i~~~~-g~P~~~~~ID-AA~~~~~~~k~yfFkG~~--------yw~y------d~~~~~~~~gYPk 394 (450)
T 1su3_A 331 AVQGQNVLHGYPKDIYSSF-GFPRTVKHID-AALSEENTGKTYFFVANK--------YWRY------DEYKRSMDPGYPK 394 (450)
T ss_dssp EEETTEECTTCSEEHHHHH-CCCTTCCCCC-EEEEETTTTEEEEEETTE--------EEEE------ETTTTEECSSCSE
T ss_pred EecCCcccCCCceeeehhh-cCCCCCCccc-eEEEEcCCCeEEEEeCCE--------EEEE------eCCCccccCCCCc
Confidence 7763220 00 1111 00 1222 1222 23233 58999997731 2333 43322111
Q ss_pred Eec--CCCCCCCCCceeEEEEeCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEe
Q 013179 224 QLK--LPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRL 282 (448)
Q Consensus 224 ~~~--~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 282 (448)
.+. -+| .|. . -.++...++++|.|-| +..|+||..+.+-...
T Consensus 395 ~I~~~fpg-ip~-~-iDAA~~~~g~~YFFkg--------------~~ywr~d~~~~~v~~~ 438 (450)
T 1su3_A 395 MIAHDFPG-IGH-K-VDAVFMKDGFFYFFHG--------------TRQYKFDPKTKRILTL 438 (450)
T ss_dssp EHHHHSTT-SCS-C-CSEEEEETTEEEEEET--------------TEEEEEETTTTEEEEE
T ss_pred chhhcCCC-CCC-C-ccEEEEcCCeEEEEeC--------------CEEEEEECCcceEecc
Confidence 111 011 221 2 2245557889999976 4689999887765543
No 226
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=72.92 E-value=46 Score=31.16 Aligned_cols=153 Identities=14% Similarity=0.268 Sum_probs=75.1
Q ss_pred eEEEECCeEEEEcccCCCCCCCcEEEEECCCCcE--EEeec-CCCCCCcCcccEEEEE-CCcEEEEEecCCCCccCCceE
Q 013179 81 IAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQW--SELTS-FGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVY 156 (448)
Q Consensus 81 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W--~~~~~-~~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~ 156 (448)
+++.+++++|+|=|. .+|+++.....- ..+.. -..+|.. .. ++... .++++|+|=| +..|
T Consensus 185 Av~~~~g~~~fFkg~-------~~Wr~~~~~~~~~p~~I~~~wpgLP~~-iD-Aa~~~~~~g~~~fFkg-------~~yW 248 (365)
T 3ba0_A 185 AVTTVGNKIFFFKDR-------FFWLKVSERPKTSVNLISSLWPTLPSG-IE-AAYEIEARNQVFLFKD-------DKYW 248 (365)
T ss_dssp CEEEETTEEEEEETT-------EEEECCSSCCCCCEEEHHHHCSSCCSS-CC-EEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEEcCCeEEEEeCC-------EEEEEcCCCccCCccchhhhccCCCCC-cc-EEEEecCCCEEEEEeC-------CEEE
Confidence 445578999999662 377776544321 11111 0235532 22 23333 3569999976 3366
Q ss_pred EEeCCCCc--e-EeecCCCCCCCc-cCCceeEEe--CCEEEEEcccCCCCCccCceeeecccccccCCCCceEE-----e
Q 013179 157 VLDTISLE--W-MQLPVTGSVPPP-RCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ-----L 225 (448)
Q Consensus 157 ~yd~~t~~--W-~~~~~~~~~p~~-r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~-----~ 225 (448)
+|+..... + +.++.. .+|.. ..--++... ++++|+|-|.. .|. ||..+.+-.. +
T Consensus 249 r~~~~~~~~gyPk~I~~~-GlP~~~~~IDAA~~~~~~~~~yfFkG~~--------yw~------yd~~~~~v~~gyPk~I 313 (365)
T 3ba0_A 249 LISNLRPEPNYPKSIHSF-GFPNFVKKIDAAVFNPRFYRTYFFVDNQ--------YWR------YDERRQMMDPGYPKLI 313 (365)
T ss_dssp ECSTTSCTTTCSEETTTT-TCCTTCCCCCEEEEETTTTEEEEEETTE--------EEE------EETTTTEECSSCCCCH
T ss_pred EEcCCcccCCCCceeeec-cCCCCCCCcCEEEEeCCCCEEEEEECCE--------EEE------EeCCcceecCCCCcch
Confidence 76543211 1 122211 13331 112233333 57999997731 233 3443332110 0
Q ss_pred c--CCCCCCCCCceeEEEEe-CCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEE
Q 013179 226 K--LPGQAPSSRCGHTITSG-GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR 281 (448)
Q Consensus 226 ~--~~g~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 281 (448)
. -+ ..|. .. .++... ++++|.|=| +..|+||..+.+-..
T Consensus 314 ~~~f~-g~p~-~i-DaA~~~~~g~~YfFkg--------------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 314 TKNFQ-GIGP-KI-DAVFYSKNKYYYFFQG--------------SNQFEYDFLLQRITK 355 (365)
T ss_dssp HHHST-TCCS-SC-SEEEEETTTEEEEEET--------------TEEEEEETTTTEEEE
T ss_pred hhcCC-CCCC-cc-ceeeEecCCcEEEEeC--------------CEEEEEECCccEEec
Confidence 0 01 1221 22 244444 788999876 468999998877655
No 227
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=72.48 E-value=51 Score=29.10 Aligned_cols=110 Identities=11% Similarity=0.078 Sum_probs=55.5
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCC--cEEeeeecCCCCCCCCCCCCCcceeEEEE---CCeEEEEcccCCCCCCCc
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAI---DCHMFIFGGRFGSRRLGD 103 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~~~~~~~p~~R~~h~~~~~---~~~lyv~GG~~~~~~~~~ 103 (448)
.++..++.|+.++ .+.+||+.++ .+..+.... ..... -.+++.. ++.+++.|+.++ .
T Consensus 21 ~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~-------~~~~~-v~~~~~~~~~d~~~l~s~~~dg-----~ 82 (351)
T 3f3f_A 21 FYGRHVATCSSDQ-----HIKVFKLDKDTSNWELSDSWR-------AHDSS-IVAIDWASPEYGRIIASASYDK-----T 82 (351)
T ss_dssp SSSSEEEEEETTS-----EEEEEEECSSSCCEEEEEEEE-------CCSSC-EEEEEECCGGGCSEEEEEETTS-----C
T ss_pred CCCCEEEEeeCCC-----eEEEEECCCCCCcceecceec-------cCCCc-EEEEEEcCCCCCCEEEEEcCCC-----e
Confidence 4566777787543 4777777744 444433211 01111 1222222 367777777653 4
Q ss_pred EEEEECCCC-------cEEEeecCCCCCCcCc-ccEEEEECC--cEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 104 FWVLDTDIW-------QWSELTSFGDLPSPRD-FAAASAIGN--RKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 104 ~~~~d~~t~-------~W~~~~~~~~~p~~r~-~~~~~~~~~--~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
+..+|+.+. .|..+.. +..... -.+++...+ +.+++.|+.++ .+..||+.+.+
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~ 145 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCT---LNDSKGSLYSVKFAPAHLGLKLACLGNDG-----ILRLYDALEPS 145 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEE---ECCCSSCEEEEEECCGGGCSEEEEEETTC-----EEEEEECSSTT
T ss_pred EEEEecCCCcccccccCcceeee---ecccCCceeEEEEcCCCCCcEEEEecCCC-----cEEEecCCChH
Confidence 777777654 3444432 111111 122333333 56677776543 47788876543
No 228
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=71.81 E-value=56 Score=29.28 Aligned_cols=107 Identities=15% Similarity=0.120 Sum_probs=58.7
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECC
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTD 110 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~ 110 (448)
+..++.|+.++ .+.+||..+......... ..........+..-+++.++.|+.++ .+..+|..
T Consensus 54 g~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~s~~~dg-----~v~iwd~~ 116 (368)
T 3mmy_A 54 GNFLIAGSWAN-----DVRCWEVQDSGQTIPKAQ-------QMHTGPVLDVCWSDDGSKVFTASCDK-----TAKMWDLS 116 (368)
T ss_dssp SEEEEEEETTS-----EEEEEEECTTSCEEEEEE-------EECSSCEEEEEECTTSSEEEEEETTS-----EEEEEETT
T ss_pred ceEEEEECCCC-----cEEEEEcCCCCceeEEEe-------ccccCCEEEEEECcCCCEEEEEcCCC-----cEEEEEcC
Confidence 47888887643 488888887332221111 00111122222222566666776543 58899999
Q ss_pred CCcEEEeecCCCCCCcCcccEEEE--ECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 111 IWQWSELTSFGDLPSPRDFAAASA--IGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 111 t~~W~~~~~~~~~p~~r~~~~~~~--~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
+.+...+.. ... .-.+++. ..++.+++.|+.++ .+..||+.+.+
T Consensus 117 ~~~~~~~~~---~~~--~v~~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~ 162 (368)
T 3mmy_A 117 SNQAIQIAQ---HDA--PVKTIHWIKAPNYSCVMTGSWDK-----TLKFWDTRSSN 162 (368)
T ss_dssp TTEEEEEEE---CSS--CEEEEEEEECSSCEEEEEEETTS-----EEEEECSSCSS
T ss_pred CCCceeecc---ccC--ceEEEEEEeCCCCCEEEEccCCC-----cEEEEECCCCc
Confidence 888666542 111 1222332 34567777777654 37888887654
No 229
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=71.56 E-value=48 Score=28.46 Aligned_cols=122 Identities=18% Similarity=0.193 Sum_probs=60.9
Q ss_pred CCCCCCC---CcEEEEE-CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEE
Q 013179 15 TVPQPRS---GHSAVNI-GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMF 90 (448)
Q Consensus 15 ~~P~~R~---~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~ly 90 (448)
..|..+. ..-++.. .++.+|+|=| +.+|+++.....+........ =+.+|. .--|+...++++|
T Consensus 9 ~~p~~C~~~~~~DAi~~~~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~---wpgLP~--~IDAA~~~~~~~y 76 (219)
T 1hxn_A 9 HESTRCDPDLVLSAMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQ---WPQGPS--TVDAAFSWEDKLY 76 (219)
T ss_dssp --CGGGCTTCCCCEEEECTTSCEEEEET-------TEEEESSSSSCTTCCEEGGGT---CTTSCS--SCSEEEEETTEEE
T ss_pred CCCCcCCCCCCEeEEEECCCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhh---ccCCCC--CccEEEEECCcEE
Confidence 3555553 2334443 4588999887 346766654332211111100 012232 2234455689999
Q ss_pred EEcccCCCCCCCcEEEEECCCC-cE-----EEeecCCCCCCc--Cc-ccEEEEE-CCcEEEEEecCCCCccCCceEEEeC
Q 013179 91 IFGGRFGSRRLGDFWVLDTDIW-QW-----SELTSFGDLPSP--RD-FAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDT 160 (448)
Q Consensus 91 v~GG~~~~~~~~~~~~~d~~t~-~W-----~~~~~~~~~p~~--r~-~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~ 160 (448)
+|=| +.+|+|+..++ +- +.+...-.+|.. .. --++... .++++|+|-| +..|+||.
T Consensus 77 fFkG-------~~yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~ 142 (219)
T 1hxn_A 77 LIQD-------TKVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDL 142 (219)
T ss_dssp EEET-------TEEEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEG
T ss_pred EecC-------CEEEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeC
Confidence 9966 35899997532 11 112110123433 11 2222222 4679999977 44789986
Q ss_pred CC
Q 013179 161 IS 162 (448)
Q Consensus 161 ~t 162 (448)
.+
T Consensus 143 ~~ 144 (219)
T 1hxn_A 143 KS 144 (219)
T ss_dssp GG
T ss_pred CC
Confidence 54
No 230
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=71.33 E-value=46 Score=35.92 Aligned_cols=161 Identities=14% Similarity=0.098 Sum_probs=82.3
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEE-EE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFW-VL 107 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~-~~ 107 (448)
.+++.++++. ...++.++..++....+.. .+..+..+.+.. +++.+++++. ...+| .+
T Consensus 306 pdG~~la~~~------~~~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~~~ 364 (1045)
T 1k32_A 306 LDGDLIAFVS------RGQAFIQDVSGTYVLKVPE---------PLRIRYVRRGGD-TKVAFIHGTR-----EGDFLGIY 364 (1045)
T ss_dssp CGGGCEEEEE------TTEEEEECTTSSBEEECSC---------CSCEEEEEECSS-SEEEEEEEET-----TEEEEEEE
T ss_pred CCCCEEEEEE------cCEEEEEcCCCCceEEccC---------CCcceEEeeeEc-CCCeEEEEEC-----CCceEEEE
Confidence 4565555554 2358888888776554421 111133333444 5555555443 24688 99
Q ss_pred ECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe-
Q 013179 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (448)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~- 186 (448)
|..+.+-..+.. ........+...+++.++++..+ ..++.+|+.+++-..+.. ...... ..++..
T Consensus 365 d~~~~~~~~l~~-----~~~~~~~~~~SpDG~~la~~~~~-----~~v~~~d~~tg~~~~~~~---~~~~~v-~~~~~Sp 430 (1045)
T 1k32_A 365 DYRTGKAEKFEE-----NLGNVFAMGVDRNGKFAVVANDR-----FEIMTVDLETGKPTVIER---SREAMI-TDFTISD 430 (1045)
T ss_dssp ETTTCCEEECCC-----CCCSEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEE---CSSSCC-CCEEECT
T ss_pred ECCCCCceEecC-----CccceeeeEECCCCCEEEEECCC-----CeEEEEECCCCceEEecc---CCCCCc-cceEECC
Confidence 998887665541 11122333444556666666533 369999999888776641 111111 223333
Q ss_pred CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEec
Q 013179 187 EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLK 226 (448)
Q Consensus 187 ~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~ 226 (448)
+++.+++++......... ..-..+..+|..+.+...+.
T Consensus 431 DG~~la~~~~~~~~~~~~--~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 431 NSRFIAYGFPLKHGETDG--YVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp TSCEEEEEEEECSSTTCS--CCEEEEEEEETTTTEEEECS
T ss_pred CCCeEEEEecCccccccC--CCCCeEEEEECCCCcEEEee
Confidence 556556655432000000 01134556688877655443
No 231
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=71.26 E-value=79 Score=30.80 Aligned_cols=68 Identities=10% Similarity=-0.029 Sum_probs=35.1
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCce
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (448)
+++.++.|+.++ .+..+|..+..-..+.. +. ..-.+++...+++.++.|+.++ .+..||.....-
T Consensus 314 ~~~~l~t~~~d~-----~i~~w~~~~~~~~~~~~----~~-~~v~~~~~s~~g~~l~~~~~dg-----~v~~~~~~~~~~ 378 (577)
T 2ymu_A 314 DGQTIASASDDK-----TVKLWNRNGQHLQTLTG----HS-SSVWGVAFSPDGQTIASASDDK-----TVKLWNRNGQLL 378 (577)
T ss_dssp TSSEEEEEETTS-----CEEEEETTSCEEEEECC----CS-SCEEEEEECTTSSEEEEEETTS-----EEEEEETTCCEE
T ss_pred CCCEEEEEeCCC-----eEEEEeCCCCeeEEEeC----CC-CCEEEEEECCCCCEEEEEeCCC-----EEEEEcCCCCEE
Confidence 456666666443 36777877665444331 11 1112333345566777776543 366777654433
Q ss_pred Eee
Q 013179 166 MQL 168 (448)
Q Consensus 166 ~~~ 168 (448)
..+
T Consensus 379 ~~~ 381 (577)
T 2ymu_A 379 QTL 381 (577)
T ss_dssp EEE
T ss_pred EEe
Confidence 333
No 232
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=70.85 E-value=57 Score=28.98 Aligned_cols=101 Identities=14% Similarity=0.204 Sum_probs=51.2
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcC-CCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCCCcEEEE
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDID-NKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~~~~~~~ 107 (448)
++.||+.. .+ ..++.||+. ...|.... +.+ ...+.+.. ++.||+.. . ...++.|
T Consensus 107 ~~~l~v~t-~~-----~~l~~~d~~g~~~~~~~~-----------~~~-~~~~~~~~~~g~l~vgt-~-----~~~l~~~ 162 (330)
T 3hxj_A 107 EDILYVTS-MD-----GHLYAINTDGTEKWRFKT-----------KKA-IYATPIVSEDGTIYVGS-N-----DNYLYAI 162 (330)
T ss_dssp TTEEEEEC-TT-----SEEEEECTTSCEEEEEEC-----------SSC-CCSCCEECTTSCEEEEC-T-----TSEEEEE
T ss_pred CCEEEEEe-cC-----CEEEEEcCCCCEEEEEcC-----------CCc-eeeeeEEcCCCEEEEEc-C-----CCEEEEE
Confidence 46677633 21 348889988 33465432 111 12233444 56777642 1 1358999
Q ss_pred ECCCC-cEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCC-CceEee
Q 013179 108 DTDIW-QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS-LEWMQL 168 (448)
Q Consensus 108 d~~t~-~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t-~~W~~~ 168 (448)
|+... .|.... +.. ...+.+...++.||+.. ..+++||... ..|+..
T Consensus 163 d~~g~~~~~~~~-----~~~-~~~~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~ 211 (330)
T 3hxj_A 163 NPDGTEKWRFKT-----NDA-ITSAASIGKDGTIYFGS--------DKVYAINPDGTEKWNFY 211 (330)
T ss_dssp CTTSCEEEEEEC-----SSC-CCSCCEECTTCCEEEES--------SSEEEECTTSCEEEEEC
T ss_pred CCCCCEeEEEec-----CCC-ceeeeEEcCCCEEEEEe--------CEEEEECCCCcEEEEEc
Confidence 99822 254432 111 12233333466777643 4589999432 346543
No 233
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=70.35 E-value=61 Score=29.09 Aligned_cols=58 Identities=19% Similarity=0.337 Sum_probs=37.1
Q ss_pred CcEEEEECCCCcE-EEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCc---c-CCceEEEeCCCCceEeec
Q 013179 102 GDFWVLDTDIWQW-SELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKK---W-LSDVYVLDTISLEWMQLP 169 (448)
Q Consensus 102 ~~~~~~d~~t~~W-~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~---~-~~~v~~yd~~t~~W~~~~ 169 (448)
..++++|+.+++. ..+.. + .....+...++ +++.+...... . ...++.+| +.+++.+.
T Consensus 152 ~~l~~~d~~~~~~~~~l~~----~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 214 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEK----P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMF 214 (347)
T ss_dssp EEEEEEETTTTEEEEEEEE----E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEE
T ss_pred ceEEEEECCCCeEEeeecC----C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEec
Confidence 5699999999887 66652 2 33344445676 66666544321 2 45788888 77777775
No 234
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=69.57 E-value=70 Score=29.48 Aligned_cols=59 Identities=20% Similarity=0.097 Sum_probs=31.2
Q ss_pred eCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEE-eccCCCCCCCccceEEEEECCEEEEEccCCCC
Q 013179 243 GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR-LPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK 313 (448)
Q Consensus 243 ~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~-~~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~ 313 (448)
.++.+++.|+.+ ..+.++|..+.+-.. +.........+....+..-++++++.|+.++.
T Consensus 308 ~~g~~l~~g~~d------------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~ 367 (380)
T 3iz6_a 308 ISGRLLFAGYSN------------GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKN 367 (380)
T ss_dssp SSSSEEEEECTT------------SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSC
T ss_pred CCCCEEEEEECC------------CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCC
Confidence 456666666543 358899987665432 22211111122222233335778888887653
No 235
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=67.53 E-value=68 Score=28.57 Aligned_cols=171 Identities=11% Similarity=0.079 Sum_probs=87.1
Q ss_pred CCcEEEEECCcEEEEEcCCCCCcccCceEEEEcC--CCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCC
Q 013179 21 SGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDID--NKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS 98 (448)
Q Consensus 21 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~ 98 (448)
..|++++. ++.+|.+|--..++ +.. |. ..+...+.+ -..|++++-++++|.+|-....
T Consensus 33 ~~h~~~l~-~G~v~~wG~n~~Gq-lg~-----p~~~~~~i~~ia~-------------G~~hs~~l~~G~v~~wG~n~~G 92 (282)
T 3qhy_B 33 YFHGLALK-GGKVLGWGANLNGQ-LTM-----PAATQSGVDAIAA-------------GNYHSLALKDGEVIAWGGNEDG 92 (282)
T ss_dssp SSEEEEEE-TTEEEEEECCSSST-TSC-----CGGGGSCCCEEEE-------------CSSEEEEEETTEEEEEECCTTS
T ss_pred CCeEEEEE-CCEEEEEeCCCCCC-CCC-----CccCCCCEEEEEe-------------CCCEEEEEECCEEEEeeCCCCC
Confidence 35777766 79999999432221 110 00 111222221 1357777678999999854321
Q ss_pred CCCCcEEEEECC--CCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCC
Q 013179 99 RRLGDFWVLDTD--IWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPP 176 (448)
Q Consensus 99 ~~~~~~~~~d~~--t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~ 176 (448)
. +.- |. ......+.. -..|+++.. ++++|..|-...... . +- .........++
T Consensus 93 q-lg~-----P~~~~~~v~~ia~-------G~~hs~al~-~G~v~~wG~n~~gql-g-~~--~~~~~~i~~i~------- 147 (282)
T 3qhy_B 93 Q-TTV-----PAEARSGVDAIAA-------GAWASYALK-DGKVIAWGDDSDGQT-T-VP--AEAQSGVTALD------- 147 (282)
T ss_dssp T-TCC-----CGGGSSSEEEEEE-------ETTEEEEEE-TTEEEEEECCTTSTT-S-CC--GGGGSSEEEEE-------
T ss_pred C-CCC-----CcccCCCeEEEEC-------cCCEEEEEe-CCeEEEecCCCCCcC-C-CC--ccCCCCeEEEE-------
Confidence 1 110 00 123334332 245777878 889999985332211 0 00 00111223332
Q ss_pred ccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCC
Q 013179 177 PRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHG 254 (448)
Q Consensus 177 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~ 254 (448)
.-..|++++.++.+|.+|-..... ..-+ .........+. ....|++++.++++|..|-..
T Consensus 148 ~G~~~~~~l~~G~v~~wG~n~~gq-lg~p----------~~~~~~v~~i~-------~G~~hs~al~~G~v~~wG~n~ 207 (282)
T 3qhy_B 148 GGVYTALAVKNGGVIAWGDNYFGQ-TTVP----------AEAQSGVDDVA-------GGIFHSLALKDGKVIAWGDNR 207 (282)
T ss_dssp ECSSEEEEEETTEEEEEECCTTST-TSCC----------GGGGSSEEEEE-------ECSSEEEEEETTEEEEEECCT
T ss_pred cccCEEEEEECCEEEEecCCCCCC-CCCc----------eecCCCeEEEE-------ecCCEEEEEECCeEEEEECCC
Confidence 134577777799999999654321 1000 00122344443 233566666788999998543
No 236
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=67.19 E-value=82 Score=29.38 Aligned_cols=54 Identities=17% Similarity=0.135 Sum_probs=28.5
Q ss_pred CCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCC-CccCCceeEEe-CCEEEEEcccC
Q 013179 136 GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVP-PPRCGHTATMV-EKRLLIYGGRG 197 (448)
Q Consensus 136 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p-~~r~~~~~~~~-~~~lyv~GG~~ 197 (448)
.++.+++.|+.++ .+..||+.+.+-...- ..+ ....-.+++.. ++.+++.|+.+
T Consensus 180 ~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~---~~~~h~~~v~~~~~s~~~~~l~s~~~d 235 (437)
T 3gre_A 180 EEKSLLVALTNLS-----RVIIFDIRTLERLQII---ENSPRHGAVSSICIDEECCVLILGTTR 235 (437)
T ss_dssp SSCEEEEEEETTS-----EEEEEETTTCCEEEEE---ECCGGGCCEEEEEECTTSCEEEEEETT
T ss_pred CCCCEEEEEeCCC-----eEEEEeCCCCeeeEEE---ccCCCCCceEEEEECCCCCEEEEEcCC
Confidence 3457777777543 4888998876543321 111 11111122222 56677777764
No 237
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=66.64 E-value=72 Score=28.53 Aligned_cols=102 Identities=8% Similarity=0.011 Sum_probs=53.2
Q ss_pred ceEEEEcCCCcE-EeeeecCCCCCCCCCCCCCcceeEEEEC----CeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCC
Q 013179 47 DVVVYDIDNKLW-FQPECTGNGSNGQVGPGPRAFHIAVAID----CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFG 121 (448)
Q Consensus 47 ~~~~yd~~~~~W-~~~~~~~~~~~~~~~p~~R~~h~~~~~~----~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~ 121 (448)
.+.+||..++.. ..+..... ..........+...+ +.+++.|+.++ .+.+||+.+.+-...-.
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~-- 112 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVD-----ADADENFYTCAWTYDSNTSHPLLAVAGSRG-----IIRIINPITMQCIKHYV-- 112 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEEC-----SCTTCCEEEEEEEECTTTCCEEEEEEETTC-----EEEEECTTTCCEEEEEE--
T ss_pred EEEEEEcCCCcEEEeeeeccc-----cCCCCcEEEEEeccCCCCCCCEEEEecCCC-----EEEEEEchhceEeeeec--
Confidence 488888886543 23322110 001122223333334 56777777553 58889988765433221
Q ss_pred CCCCcCcccEEEEEC-CcEEEEEecCCCCccCCceEEEeCCCCceEe
Q 013179 122 DLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ 167 (448)
Q Consensus 122 ~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~ 167 (448)
.. ...-.+++... ++.+++.|+.++ .+..||+.+.+-..
T Consensus 113 -~~-~~~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~ 152 (366)
T 3k26_A 113 -GH-GNAINELKFHPRDPNLLLSVSKDH-----ALRLWNIQTDTLVA 152 (366)
T ss_dssp -SC-CSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTTTEEEE
T ss_pred -CC-CCcEEEEEECCCCCCEEEEEeCCC-----eEEEEEeecCeEEE
Confidence 01 11112223333 557777777544 48889988776444
No 238
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=65.44 E-value=60 Score=27.23 Aligned_cols=112 Identities=14% Similarity=0.239 Sum_probs=61.7
Q ss_pred EEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcE---EeeeecCCCCCCCCCCCCCcceeEEEE--CCeEEEEcccCCC
Q 013179 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLW---FQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGS 98 (448)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W---~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv~GG~~~~ 98 (448)
+++...++++|+|=| +.+|+|+..+... ..+... .+.+|..+. -+++.. ++++|+|-|
T Consensus 55 Aa~~~~~g~~yfFkg-------~~yw~~~~~~~~~gyPk~I~~~-----~~glP~~~I-DAA~~~~~~g~~yfFkG---- 117 (196)
T 3c7x_A 55 TAYERKDGKFVFFKG-------DKHWVFDEASLEPGYPKHIKEL-----GRGLPTDKI-DAALFWMPNGKTYFFRG---- 117 (196)
T ss_dssp EEEECTTSCEEEEET-------TEEEEEETTEECTTCSEEGGGT-----CBSCCSSCC-SEEEEETTTTEEEEEET----
T ss_pred EEEEeCCCcEEEecC-------CEEEEEeCCcccCCCCeEhhhc-----CCCCCCCcc-cEEEEEccCCEEEEEEC----
Confidence 444445688999987 4589998542110 111111 112343233 333333 589999977
Q ss_pred CCCCcEEEEECCCCcEEE-----eecCCCCCCcCcccEEEEECCc-EEEEEecCCCCccCCceEEEeCCCCc
Q 013179 99 RRLGDFWVLDTDIWQWSE-----LTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 99 ~~~~~~~~~d~~t~~W~~-----~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
+..|+||..+++-.. +..-..+|. .-.++....++ ++|+|=| +..++||..+.+
T Consensus 118 ---~~yw~yd~~~~~v~~gyPk~i~~~~gip~--~idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 118 ---NKYYRFNEELRAVDSEYPKNIKVWEGIPE--SPRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp ---TEEEEEETTTTEECTTCSEEGGGSBTCCS--SCSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred ---CEEEEEeCCcccccCCCCccHHHCCCcCC--CcceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 358999998764321 111112332 22344444444 8999966 447899987754
No 239
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=64.87 E-value=1.3e+02 Score=30.96 Aligned_cols=39 Identities=18% Similarity=0.107 Sum_probs=26.2
Q ss_pred hhHHHHHHhhhcCcccCCCceeEEeehhHHHHHHHhhhh
Q 013179 395 EEFLELASRLMGAGVFSNGQVSRIQVSLILFMMYLLVFA 433 (448)
Q Consensus 395 ~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 433 (448)
..|......|..+...+...+...=.|.++.|+..+|..
T Consensus 571 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~ 609 (751)
T 2xe4_A 571 SDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNM 609 (751)
T ss_dssp HHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHh
Confidence 344455555666666677778888888888887666543
No 240
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=64.24 E-value=80 Score=28.19 Aligned_cols=66 Identities=9% Similarity=-0.032 Sum_probs=36.9
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCce
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (448)
+++.++.|+.++ .+..+|+.+++-...-. ... ..-.+++...++.+++.|+.++ .+..||+....-
T Consensus 76 dg~~l~s~s~D~-----~v~~wd~~~~~~~~~~~---~h~-~~v~~~~~~~~~~~l~s~s~D~-----~i~vwd~~~~~~ 141 (319)
T 3frx_A 76 DGAYALSASWDK-----TLRLWDVATGETYQRFV---GHK-SDVMSVDIDKKASMIISGSRDK-----TIKVWTIKGQCL 141 (319)
T ss_dssp TSSEEEEEETTS-----EEEEEETTTTEEEEEEE---CCS-SCEEEEEECTTSCEEEEEETTS-----CEEEEETTSCEE
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCeeEEEc---cCC-CcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCeE
Confidence 566777777553 48889998876433221 111 1112233335557777787654 367778765433
No 241
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=63.39 E-value=78 Score=28.17 Aligned_cols=96 Identities=6% Similarity=0.063 Sum_probs=47.7
Q ss_pred ceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEE
Q 013179 79 FHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVL 158 (448)
Q Consensus 79 ~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 158 (448)
.|+++..++++|.+|-......-.. .........+.. -..|+++. .++++|..|--.....-...
T Consensus 151 ~~~~~l~~G~v~~wG~n~~gqlg~p----~~~~~~v~~i~~-------G~~hs~al-~~G~v~~wG~n~~gqlg~p~--- 215 (282)
T 3qhy_B 151 YTALAVKNGGVIAWGDNYFGQTTVP----AEAQSGVDDVAG-------GIFHSLAL-KDGKVIAWGDNRYKQTTVPT--- 215 (282)
T ss_dssp SEEEEEETTEEEEEECCTTSTTSCC----GGGGSSEEEEEE-------CSSEEEEE-ETTEEEEEECCTTSTTCCCG---
T ss_pred CEEEEEECCEEEEecCCCCCCCCCc----eecCCCeEEEEe-------cCCEEEEE-ECCeEEEEECCCCCCCCCCc---
Confidence 4666666888888875432111000 000123344432 23577777 78899999854322210000
Q ss_pred eCCCCceEeecCCCCCCCccCCceeEEeCCEEEEEcccC
Q 013179 159 DTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRG 197 (448)
Q Consensus 159 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~ 197 (448)
........++ .-..|++++.++++|..|-..
T Consensus 216 -~~~~~v~~i~-------~G~~h~~al~~g~v~~wG~n~ 246 (282)
T 3qhy_B 216 -EALSGVSAIA-------SGEWYSLALKNGKVIAWGSSR 246 (282)
T ss_dssp -GGGSSCCEEE-------ECSSCEEEEETTEEEEESTTC
T ss_pred -ccCCCceEEE-------cCCCEEEEEECCEEEEecCCC
Confidence 0011122221 123566655588999998653
No 242
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=63.38 E-value=82 Score=28.03 Aligned_cols=116 Identities=10% Similarity=-0.060 Sum_probs=58.5
Q ss_pred EEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCCCC
Q 013179 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLG 102 (448)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~~~ 102 (448)
.+++..++++|+....... ..++.||+.+++.+.+... +..+.....+.. ++.+|+.-- ...
T Consensus 76 gia~~~dG~l~vad~~~~~---~~v~~~d~~~g~~~~~~~~---------~~~~~~~g~~~~~~~~~~v~d~-----~~g 138 (306)
T 2p4o_A 76 GLAFTSNGDLVATGWNADS---IPVVSLVKSDGTVETLLTL---------PDAIFLNGITPLSDTQYLTADS-----YRG 138 (306)
T ss_dssp EEEECTTSCEEEEEECTTS---CEEEEEECTTSCEEEEEEC---------TTCSCEEEEEESSSSEEEEEET-----TTT
T ss_pred eEEEcCCCcEEEEeccCCc---ceEEEEcCCCCeEEEEEeC---------CCccccCcccccCCCcEEEEEC-----CCC
Confidence 3334445667775532111 2488899888887766532 233444444433 456777532 124
Q ss_pred cEEEEECCCCcEEE--eecCC--CCCCcC--cccEEEEECCcEEEEEecCCCCccCCceEEEeCCC
Q 013179 103 DFWVLDTDIWQWSE--LTSFG--DLPSPR--DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (448)
Q Consensus 103 ~~~~~d~~t~~W~~--~~~~~--~~p~~r--~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t 162 (448)
.+|++|+.+.+-+. ..... ..+... .-... ...++.+|+.-- ..+.+++||+..
T Consensus 139 ~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-s~dg~~lyv~d~-----~~~~I~~~~~~~ 198 (306)
T 2p4o_A 139 AIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-KRFGNFLYVSNT-----EKMLLLRIPVDS 198 (306)
T ss_dssp EEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-EEETTEEEEEET-----TTTEEEEEEBCT
T ss_pred eEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-CcCCCEEEEEeC-----CCCEEEEEEeCC
Confidence 69999998753221 11100 011111 11122 333347888632 235689999865
No 243
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=62.54 E-value=71 Score=27.07 Aligned_cols=152 Identities=14% Similarity=0.119 Sum_probs=75.4
Q ss_pred CCCCCCC---cEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE--CCeEE
Q 013179 16 VPQPRSG---HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMF 90 (448)
Q Consensus 16 ~P~~R~~---~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~ly 90 (448)
.|..+.. .-++...++.+|+|=| +.+|+++.....+........ =+.+|. .--|+... ++++|
T Consensus 16 ~p~~C~~~~~fDAi~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~---wp~Lp~--~iDAa~~~~~~~~iy 83 (207)
T 1pex_A 16 TPDKCDPSLSLDAITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSF---WPELPN--RIDAAYEHPSHDLIF 83 (207)
T ss_dssp CCCTTCTTCCCSEEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHH---CTTSCS--SCCEEEEETTTTEEE
T ss_pred CcccCCCCCCEeEEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHh---ccCCCC--CccEEEEeccCCcEE
Confidence 4555542 2333333478898877 347777765444322211100 011232 22344444 58999
Q ss_pred EEcccCCCCCCCcEEEEECCCCcE---EEeecCCCCCCcC-cccEEEEE-CCcEEEEEecCCCCccCCceEEEeCCCCce
Q 013179 91 IFGGRFGSRRLGDFWVLDTDIWQW---SELTSFGDLPSPR-DFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (448)
Q Consensus 91 v~GG~~~~~~~~~~~~~d~~t~~W---~~~~~~~~~p~~r-~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (448)
+|=| +.+|+|+..+..- +.+.. -.+|... .--++... .++++|+|-| +..|+||..+++-
T Consensus 84 fFkG-------~~~w~~~~~~~~~gyPk~I~~-~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~ 148 (207)
T 1pex_A 84 IFRG-------RKFWALNGYDILEGYPKKISE-LGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIM 148 (207)
T ss_dssp EEET-------TEEEEESTTCCCTTCSEESTT-TTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEE
T ss_pred EEcc-------CEEEEEeCCeeccCCceeccc-cCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccc
Confidence 9977 3478886432211 22221 1244321 12223333 3579999976 4579999876532
Q ss_pred EeecCC------CCCCCccCCceeEEeCCEEEEEccc
Q 013179 166 MQLPVT------GSVPPPRCGHTATMVEKRLLIYGGR 196 (448)
Q Consensus 166 ~~~~~~------~~~p~~r~~~~~~~~~~~lyv~GG~ 196 (448)
..--+. ..+|. . -.++...++++|.|-|.
T Consensus 149 d~gyPr~i~~~~~Gip~-~-iDaAf~~~g~~YfFkg~ 183 (207)
T 1pex_A 149 DKDYPRLIEEDFPGIGD-K-VDAVYEKNGYIYFFNGP 183 (207)
T ss_dssp CSSCCCBHHHHSTTSCS-C-CSEEEEETTEEEEEETT
T ss_pred cCCCCccHHHcCCCCCC-C-ccEEEEcCCcEEEEECC
Confidence 210000 02221 2 23444568999999774
No 244
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=61.72 E-value=1.5e+02 Score=30.41 Aligned_cols=205 Identities=11% Similarity=-0.023 Sum_probs=98.2
Q ss_pred ceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE--CCeEEEEcccCCCCCCCcEEEEECCCC----cEEEeecC
Q 013179 47 DVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLDTDIW----QWSELTSF 120 (448)
Q Consensus 47 ~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~----~W~~~~~~ 120 (448)
.+..+++.+.....+. +..+.-++++.. ++.||+.--. ...++++++.+. .-..+..
T Consensus 387 ~I~~id~~~~~~~~~~-----------~~~~~p~gla~d~~~~~Ly~sD~~-----~~~I~~~~~~g~~~~~~~~~~i~- 449 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLI-----------PNLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVIS- 449 (699)
T ss_dssp C-CEECTTSCCEECCS-----------CCCTTCCCCEEETTTTEEEECCTT-----TTSBEEEESCCCCC-CCCCCBCC-
T ss_pred ceEEEeCCCCcceeee-----------ccCcceEEEccccccCeEEEEecC-----CCeEEEEecCCCCCCcceEEEEe-
Confidence 5667777776655442 122223444443 5678876322 245888998751 1111110
Q ss_pred CCCCCcCcccEEEEE-CCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe--CCEEEEEcccC
Q 013179 121 GDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRG 197 (448)
Q Consensus 121 ~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~ 197 (448)
..+.. -.++++. .++.||+.-. ..+.|+++++....-+.+... .+..|+ .+++. ++.||+.--..
T Consensus 450 ~~~~~---P~glavD~~~g~LY~tD~-----~~~~I~v~d~dg~~~~~l~~~-~~~~P~---giavDp~~g~ly~td~~~ 517 (699)
T 1n7d_A 450 RDIQA---PDGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVKRKTLFRE-QGSKPR---AIVVDPVHGFMYWTDWGT 517 (699)
T ss_dssp SCC-----CCCEECCCSSSBCEECCT-----TTSCEEEEBSSSCCEEEECCC-SSCCCC---CEECCSSSSCCEECCCSS
T ss_pred CCCCC---cceEEEEeeCCcEEEEec-----cCCeEEEEecCCCceEEEEeC-CCCCcc---eEEEccCCCcEEEcccCC
Confidence 01111 1223332 3458888531 235689999876654444311 122222 23332 56777653110
Q ss_pred CCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEE--eCCEEEEEcCCCCCCCcccccceeCcEEEEEcC
Q 013179 198 GGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRL 275 (448)
Q Consensus 198 ~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~ 275 (448)
...++++++....-+.+... .+.. -.++++ .+++||+.-.. .+.|+++|+.
T Consensus 518 -----------~~~I~~~~~dG~~~~~l~~~-~l~~---PnGlavd~~~~~LY~aD~~------------~~~I~~~d~d 570 (699)
T 1n7d_A 518 -----------PAKIKKGGLNGVDIYSLVTE-NIQW---PNGITLDLLSGRLYWVDSK------------LHSISSIDVN 570 (699)
T ss_dssp -----------SCCEEBCCSSSCCCCEESCS-SCSS---CCCEEECTTTCCEEEEETT------------TTEEEEECSS
T ss_pred -----------CCeEEEEeCCCCCeeEEEeC-CCCC---ccEEEEeccCCEEEEEecC------------CCeEEEEccC
Confidence 02334446554433333211 1111 123444 46789987532 2568999987
Q ss_pred CCceEEeccCCCCCCCccceEEEEECCEEEEEcc
Q 013179 276 SAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGG 309 (448)
Q Consensus 276 ~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG 309 (448)
...-+.+.... .......++++.++.||+.-.
T Consensus 571 G~~~~~~~~~~--~~~~~P~glavd~~~lywtd~ 602 (699)
T 1n7d_A 571 GGNRKTILEDE--KRLAHPFSLAVFEDKVFWTDI 602 (699)
T ss_dssp SSCCEEECCCS--SSCSSCCCCEEETTEEEEECS
T ss_pred CCceEEEEecC--CcCCCceEeEEECCEEEEEeC
Confidence 65444443321 111233455667788888763
No 245
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=60.33 E-value=1.2e+02 Score=29.12 Aligned_cols=18 Identities=22% Similarity=0.148 Sum_probs=15.2
Q ss_pred CCcEEEEECCcEEEEEcC
Q 013179 21 SGHSAVNIGKSKVVVFGG 38 (448)
Q Consensus 21 ~~~~~~~~~~~~iyv~GG 38 (448)
..|++++..++.||.+|-
T Consensus 76 ~~Ht~alt~~G~v~~wG~ 93 (473)
T 3of7_A 76 GMHTLALDEESNVWSWGC 93 (473)
T ss_dssp SSEEEEEETTCCEEEEEC
T ss_pred CCeEEEEecCCeEEEeEC
Confidence 468888888899999995
No 246
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=59.36 E-value=87 Score=27.02 Aligned_cols=197 Identities=11% Similarity=-0.119 Sum_probs=102.7
Q ss_pred EEEEE-CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE--CCeEEEEcccCCCCC
Q 013179 24 SAVNI-GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRR 100 (448)
Q Consensus 24 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv~GG~~~~~~ 100 (448)
..++. .++.||+.-.. .+.+++||+....-..+... .. ..-+.++.. ++.||+.-..
T Consensus 40 gi~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~-------~~---~~p~~ia~d~~~~~lyv~d~~----- 99 (267)
T 1npe_A 40 GLAFDCVDKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQ-------DL---GSPEGIALDHLGRTIFWTDSQ----- 99 (267)
T ss_dssp EEEEETTTTEEEEEETT-----TTEEEEEESSSCCCEEEECT-------TC---CCEEEEEEETTTTEEEEEETT-----
T ss_pred EEEEecCCCEEEEEECC-----CCEEEEEecCCCCcEEEEEC-------CC---CCccEEEEEecCCeEEEEECC-----
Confidence 33443 34678886542 24689999887643332210 01 122444443 5789988532
Q ss_pred CCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEEC-CcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccC
Q 013179 101 LGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRC 179 (448)
Q Consensus 101 ~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~ 179 (448)
.+.+.++|+....-..+... .+..+ ..+++.. ++.||+..... ....+++++++...-+.+... .+ ..
T Consensus 100 ~~~I~~~~~~g~~~~~~~~~-~~~~P---~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~~-~~---~~ 168 (267)
T 1npe_A 100 LDRIEVAKMDGTQRRVLFDT-GLVNP---RGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQD-NL---GL 168 (267)
T ss_dssp TTEEEEEETTSCSCEEEECS-SCSSE---EEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEECT-TC---SC
T ss_pred CCEEEEEEcCCCCEEEEEEC-CCCCc---cEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEEC-CC---CC
Confidence 24689999876543333321 11111 2334433 57999875321 124688888765443333211 11 11
Q ss_pred CceeEEe--CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCCCC
Q 013179 180 GHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGG 257 (448)
Q Consensus 180 ~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~~~ 257 (448)
-..+++. +++||+.--.. +.+..+|+.+..-..+... ... -.++++.++.||+.-..+
T Consensus 169 P~gia~d~~~~~lyv~d~~~------------~~I~~~~~~g~~~~~~~~~--~~~---P~gi~~d~~~lyva~~~~--- 228 (267)
T 1npe_A 169 PNGLTFDAFSSQLCWVDAGT------------HRAECLNPAQPGRRKVLEG--LQY---PFAVTSYGKNLYYTDWKT--- 228 (267)
T ss_dssp EEEEEEETTTTEEEEEETTT------------TEEEEEETTEEEEEEEEEC--CCS---EEEEEEETTEEEEEETTT---
T ss_pred CcEEEEcCCCCEEEEEECCC------------CEEEEEecCCCceEEEecC--CCC---ceEEEEeCCEEEEEECCC---
Confidence 1233333 46888875321 3344557665433222211 111 235566788999965322
Q ss_pred CcccccceeCcEEEEEcCCCceE
Q 013179 258 WLSRYDIYYNDTIILDRLSAQWK 280 (448)
Q Consensus 258 ~~~~~~~~~~~v~~yd~~~~~W~ 280 (448)
+.++++|+.+.+-.
T Consensus 229 ---------~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 229 ---------NSVIAMDLAISKEM 242 (267)
T ss_dssp ---------TEEEEEETTTTEEE
T ss_pred ---------CeEEEEeCCCCCce
Confidence 46899999876644
No 247
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=59.15 E-value=1.7e+02 Score=30.18 Aligned_cols=263 Identities=11% Similarity=0.099 Sum_probs=130.4
Q ss_pred cceEEeeeCCCCCCCCCCCCCcEEEEE--CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCC---
Q 013179 2 HYWVRASSSDFGGTVPQPRSGHSAVNI--GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGP--- 76 (448)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~--- 76 (448)
+.|+.+.+.. ...|. +..++. +.+.+|+.. .. ..+++.+-.-.+|+.+... ....
T Consensus 11 ~~w~~~~~~~-----~~g~i-~~i~~~p~~~~~~~~~~-~~-----ggv~rS~D~G~tW~~i~~~--------~~~~~~~ 70 (737)
T 2cn3_A 11 YKWDNVVIGG-----GGGFM-PGIVFNETEKDLIYARA-AI-----GGAYRWDPSTETWIPLLDH--------FQMDEYS 70 (737)
T ss_dssp EEEEEECCCS-----BCSCC-CEEEECSSSTTCEEEEC-SS-----SCEEEEETTTTEEEECCTT--------CCGGGGG
T ss_pred CeeEEcccCC-----Cccee-eEEEECCCCCCEEEEEe-cC-----CcEEEeCCCCCCEEECcCc--------cCccccc
Confidence 4688886411 11132 233332 236677733 11 2489999889999987521 1111
Q ss_pred Cc-ceeEEEE---CCeEEEEcccCC--CCC-CCcEEEEECCCCcEEEeecCCC----CCCcCcccEEEEE--CCcEEEEE
Q 013179 77 RA-FHIAVAI---DCHMFIFGGRFG--SRR-LGDFWVLDTDIWQWSELTSFGD----LPSPRDFAAASAI--GNRKIVMY 143 (448)
Q Consensus 77 R~-~h~~~~~---~~~lyv~GG~~~--~~~-~~~~~~~d~~t~~W~~~~~~~~----~p~~r~~~~~~~~--~~~~iyv~ 143 (448)
.. -+++++. .+.||+..|... ... ...+++=.-.-.+|+++..... +|.....+.+++. ..+.||+.
T Consensus 71 ~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g 150 (737)
T 2cn3_A 71 YYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLG 150 (737)
T ss_dssp GGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEE
T ss_pred CCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEe
Confidence 11 2233332 257888765311 111 1235554445678999864111 1211122444442 22466663
Q ss_pred ecCCCCccCCceEEEeCCCCceEeecCCCCCCCcc--------------CCceeEEeC----------CEEEEEcccCCC
Q 013179 144 GGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPR--------------CGHTATMVE----------KRLLIYGGRGGG 199 (448)
Q Consensus 144 GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r--------------~~~~~~~~~----------~~lyv~GG~~~~ 199 (448)
. ..+ ..+|+=+=.-.+|+++. .+|... .+...+.++ +.||+--.....
T Consensus 151 ~-~~g----~gl~~S~DgG~tW~~~~---~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~ 222 (737)
T 2cn3_A 151 T-RCG----NGLWRSTDYGVTWSKVE---SFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNE 222 (737)
T ss_dssp C-STT----CCEEEESSTTSSCEECT---TCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSC
T ss_pred e-ccC----CcEEEeCCCCcceeccc---CCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCc
Confidence 2 111 23554333456899886 333210 111112221 256664221111
Q ss_pred CCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEe-CCEEEEEcCCCCCCCcccccc-eeCcEEEEEcCCC
Q 013179 200 GPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG-GHYLLLFGGHGTGGWLSRYDI-YYNDTIILDRLSA 277 (448)
Q Consensus 200 ~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~-~~~~v~~yd~~~~ 277 (448)
-+|.. .-...+|+.+. .+|...+.|.+++. ++.+|+..+..... +.. ....+|+++-...
T Consensus 223 -----~v~~S------~DgG~tW~~~~---~~p~~~~~~~~~~~~~~~l~~~~~d~~g~----y~~~~~g~v~~s~d~G~ 284 (737)
T 2cn3_A 223 -----SIYRS------TDGGVTWKAVP---GQPKGLLPHHGVLASNGMLYITYGDTCGP----YDGNGKGQVWKFNTRTG 284 (737)
T ss_dssp -----CEEEE------SSTTSCCEECT---TCCCSSEEEEEEECTTSEEEEEEESSCCS----SCCSCCEEEEEEETTTC
T ss_pred -----cEEEE------cCCCCceEECC---CCCCcccceEEEECCCCeEEEEecCCCCc----cccccCceEEEEeCCCC
Confidence 12332 22567899987 45655555555554 67888875432110 011 2356999999999
Q ss_pred ceEEeccCCCC-CCCccceEEEEE----CCEEEEEccC
Q 013179 278 QWKRLPIGNEP-PPARAYHSMTCL----GSLYLLFGGF 310 (448)
Q Consensus 278 ~W~~~~~~~~~-p~~r~~~~~~~~----~~~i~v~GG~ 310 (448)
+|+++...+.. +..+++++.+.+ .+.||+.+..
T Consensus 285 tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~ 322 (737)
T 2cn3_A 285 EWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSMN 322 (737)
T ss_dssp CEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEEC
T ss_pred CEEEccCCCCCCcccccccccEEEcCCCCCEEEEEecc
Confidence 99999775321 123555554444 2578877653
No 248
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=59.14 E-value=1.9e+02 Score=30.95 Aligned_cols=194 Identities=9% Similarity=0.071 Sum_probs=95.1
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECC
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTD 110 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~ 110 (448)
+.+++.+..++ ...+|.+++..+.-..+... ......+..-+++.++++. -..++.+|+.
T Consensus 214 d~l~~~~~~dg---~~~l~~~~~~g~~~~~l~~~-----------~~~~~~~~SpDG~~la~~~------~~~i~~~d~~ 273 (1045)
T 1k32_A 214 HRIYFITDIDG---FGQIYSTDLDGKDLRKHTSF-----------TDYYPRHLNTDGRRILFSK------GGSIYIFNPD 273 (1045)
T ss_dssp TEEEEEECTTS---SCEEEEEETTSCSCEECCCC-----------CSSCEEEEEESSSCEEEEE------TTEEEEECTT
T ss_pred CEEEEEEeccC---ceEEEEEeCCCCcceEecCC-----------CCcceeeEcCCCCEEEEEe------CCEEEEecCC
Confidence 46666655332 24688888877655554311 1111223344555455542 2358888886
Q ss_pred CCcEEEeecCCCCCC------cCcccEEEEE-CCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCcee
Q 013179 111 IWQWSELTSFGDLPS------PRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTA 183 (448)
Q Consensus 111 t~~W~~~~~~~~~p~------~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~ 183 (448)
+.+-..+........ ......++.. .+++.++++. ...++.++..+.....+. ..+..+..+..
T Consensus 274 ~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~------~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~ 344 (1045)
T 1k32_A 274 TEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS------RGQAFIQDVSGTYVLKVP---EPLRIRYVRRG 344 (1045)
T ss_dssp TCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE------TTEEEEECTTSSBEEECS---CCSCEEEEEEC
T ss_pred ceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE------cCEEEEEcCCCCceEEcc---CCCcceEEeee
Confidence 665553332000000 0122344444 5665555544 245888888877766553 22221211222
Q ss_pred EEeCCEEEEEcccCCCCCccCceeeecccc-cccCCCCceEEecCCCCCCCCCceeEEEE-eCCEEEEEcCCCCCCCccc
Q 013179 184 TMVEKRLLIYGGRGGGGPIMGDLWALKGLI-EEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSR 261 (448)
Q Consensus 184 ~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~-~yd~~~~~W~~~~~~g~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~ 261 (448)
.. +++.+++++. . ..+. .+|..+.....+. + .... ...++. -+++.++++...
T Consensus 345 ~s-dg~~l~~~s~--~----------~~l~~~~d~~~~~~~~l~--~--~~~~-~~~~~~SpDG~~la~~~~~------- 399 (1045)
T 1k32_A 345 GD-TKVAFIHGTR--E----------GDFLGIYDYRTGKAEKFE--E--NLGN-VFAMGVDRNGKFAVVANDR------- 399 (1045)
T ss_dssp SS-SEEEEEEEET--T----------EEEEEEEETTTCCEEECC--C--CCCS-EEEEEECTTSSEEEEEETT-------
T ss_pred Ec-CCCeEEEEEC--C----------CceEEEEECCCCCceEec--C--Cccc-eeeeEECCCCCEEEEECCC-------
Confidence 22 5554555443 1 1233 4476666655543 1 1112 223333 345555555422
Q ss_pred ccceeCcEEEEEcCCCceEEec
Q 013179 262 YDIYYNDTIILDRLSAQWKRLP 283 (448)
Q Consensus 262 ~~~~~~~v~~yd~~~~~W~~~~ 283 (448)
..++++|+.+.+-..+.
T Consensus 400 -----~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 400 -----FEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp -----SEEEEEETTTCCEEEEE
T ss_pred -----CeEEEEECCCCceEEec
Confidence 36999999988877664
No 249
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=58.61 E-value=1.2e+02 Score=28.46 Aligned_cols=18 Identities=22% Similarity=0.499 Sum_probs=15.0
Q ss_pred CCcEEEEECCcEEEEEcC
Q 013179 21 SGHSAVNIGKSKVVVFGG 38 (448)
Q Consensus 21 ~~~~~~~~~~~~iyv~GG 38 (448)
..|++++..++.||.+|-
T Consensus 120 ~~hs~alt~~G~v~~wG~ 137 (413)
T 1a12_A 120 DSHTAALTDDGRVFLWGS 137 (413)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEcCCCcEEEeeC
Confidence 458888888899999995
No 250
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=58.52 E-value=1e+02 Score=27.66 Aligned_cols=65 Identities=8% Similarity=0.079 Sum_probs=34.4
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++.+++.|+.+ ..+.++|+.+++....- . .........++.-+++.++.||.++ .+..+|
T Consensus 86 ~~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~-~--------~h~~~v~~v~~sp~~~~l~s~~~d~-----~i~~wd 146 (343)
T 2xzm_R 86 QENCFAISSSWD-----KTLRLWDLRTGTTYKRF-V--------GHQSEVYSVAFSPDNRQILSAGAER-----EIKLWN 146 (343)
T ss_dssp SSTTEEEEEETT-----SEEEEEETTSSCEEEEE-E--------CCCSCEEEEEECSSTTEEEEEETTS-----CEEEEE
T ss_pred CCCCEEEEEcCC-----CcEEEEECCCCcEEEEE-c--------CCCCcEEEEEECCCCCEEEEEcCCC-----EEEEEe
Confidence 345566677654 34888999887643211 0 1111122222223556667777543 477788
Q ss_pred CCCC
Q 013179 109 TDIW 112 (448)
Q Consensus 109 ~~t~ 112 (448)
+...
T Consensus 147 ~~~~ 150 (343)
T 2xzm_R 147 ILGE 150 (343)
T ss_dssp SSSC
T ss_pred ccCC
Confidence 7643
No 251
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=58.31 E-value=97 Score=27.24 Aligned_cols=66 Identities=9% Similarity=0.031 Sum_probs=37.5
Q ss_pred EEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcC-cccEEEEECCc-EEEEEecCCCCccCCceEEEeCCCCceE
Q 013179 89 MFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPR-DFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (448)
Q Consensus 89 lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r-~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (448)
+++.++.. ..+..+|+.+.+-..... .+... .-+.++...++ .+|+.+..+ ..++.+|+.+.+-.
T Consensus 3 ~~v~~~~~-----~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~ 69 (337)
T 1pby_B 3 YILAPARP-----DKLVVIDTEKMAVDKVIT---IADAGPTPMVPMVAPGGRIAYATVNKS-----ESLVKIDLVTGETL 69 (337)
T ss_dssp EEEEEETT-----TEEEEEETTTTEEEEEEE---CTTCTTCCCCEEECTTSSEEEEEETTT-----TEEEEEETTTCCEE
T ss_pred EEEEcCCC-----CeEEEEECCCCcEEEEEE---cCCCCCCccceEEcCCCCEEEEEeCCC-----CeEEEEECCCCCeE
Confidence 45555433 358999999887654332 22211 12334444444 677766432 45899999887754
Q ss_pred e
Q 013179 167 Q 167 (448)
Q Consensus 167 ~ 167 (448)
.
T Consensus 70 ~ 70 (337)
T 1pby_B 70 G 70 (337)
T ss_dssp E
T ss_pred e
Confidence 3
No 252
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=57.25 E-value=92 Score=26.66 Aligned_cols=61 Identities=26% Similarity=0.414 Sum_probs=34.8
Q ss_pred ECCeEEEEcccCCCCCCCcEEEEECCCCcE--EEeecC-CCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCC
Q 013179 85 IDCHMFIFGGRFGSRRLGDFWVLDTDIWQW--SELTSF-GDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI 161 (448)
Q Consensus 85 ~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W--~~~~~~-~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 161 (448)
.++++|+|=|. .+|+++.....+ ..+... ..+|... -++... ++++|+|=| +.+|+|+..
T Consensus 27 ~~g~~yfFkg~-------~~Wr~~~~~~~~~p~~Is~~wpgLP~~I--DAA~~~-~~~~yfFkG-------~~yw~~~~~ 89 (219)
T 1hxn_A 27 NHGATYVFSGS-------HYWRLDTNRDGWHSWPIAHQWPQGPSTV--DAAFSW-EDKLYLIQD-------TKVYVFLTK 89 (219)
T ss_dssp TTSCEEEEETT-------EEEESSSSSCTTCCEEGGGTCTTSCSSC--SEEEEE-TTEEEEEET-------TEEEEEECS
T ss_pred CCCcEEEEeCC-------EEEEEcCCCCCCCceEhhhhccCCCCCc--cEEEEE-CCcEEEecC-------CEEEEEeCC
Confidence 47899999762 367776543322 122211 1355432 233344 569999966 457888865
Q ss_pred C
Q 013179 162 S 162 (448)
Q Consensus 162 t 162 (448)
+
T Consensus 90 ~ 90 (219)
T 1hxn_A 90 G 90 (219)
T ss_dssp S
T ss_pred C
Confidence 3
No 253
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=56.61 E-value=1.1e+02 Score=27.26 Aligned_cols=108 Identities=11% Similarity=0.088 Sum_probs=53.4
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..++.|+.+ ..+.+||+.+++-...- . ..........+.-++.+++.|+.++ .+..+|
T Consensus 75 ~dg~~l~s~s~D-----~~v~~wd~~~~~~~~~~-~--------~h~~~v~~~~~~~~~~~l~s~s~D~-----~i~vwd 135 (319)
T 3frx_A 75 ADGAYALSASWD-----KTLRLWDVATGETYQRF-V--------GHKSDVMSVDIDKKASMIISGSRDK-----TIKVWT 135 (319)
T ss_dssp TTSSEEEEEETT-----SEEEEEETTTTEEEEEE-E--------CCSSCEEEEEECTTSCEEEEEETTS-----CEEEEE
T ss_pred CCCCEEEEEeCC-----CEEEEEECCCCCeeEEE-c--------cCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEE
Confidence 456677777764 34888999887632211 0 1111111122222556777777654 377788
Q ss_pred CCCCcEEEeecCCCCCCcCcccEEEEEC------CcEEEEEecCCCCccCCceEEEeCCCCce
Q 013179 109 TDIWQWSELTSFGDLPSPRDFAAASAIG------NRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~------~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (448)
+....-..+.. .. ....+..... ++..++.|+.++ .+..||+.+.+-
T Consensus 136 ~~~~~~~~~~~----h~-~~v~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~~wd~~~~~~ 188 (319)
T 3frx_A 136 IKGQCLATLLG----HN-DWVSQVRVVPNEKADDDSVTIISAGNDK-----MVKAWNLNQFQI 188 (319)
T ss_dssp TTSCEEEEECC----CS-SCEEEEEECCC------CCEEEEEETTS-----CEEEEETTTTEE
T ss_pred CCCCeEEEEec----cC-CcEEEEEEccCCCCCCCccEEEEEeCCC-----EEEEEECCcchh
Confidence 86554333321 00 0111122221 223566666543 377888876553
No 254
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=55.59 E-value=20 Score=31.10 Aligned_cols=64 Identities=11% Similarity=0.122 Sum_probs=37.7
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeec---CCCCCCc------CcccEEEEE-CCcEEEEEecCCCCccCCce
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTS---FGDLPSP------RDFAAASAI-GNRKIVMYGGWDGKKWLSDV 155 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~---~~~~p~~------r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v 155 (448)
++++|+|-| +.+|+||..+++-..--| ....|.. ..-.++... .++++|+|-| +..
T Consensus 129 ~~k~yfFkG-------~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~~Y 194 (227)
T 3lp9_A 129 GKEVYLFKG-------DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD-------DHY 194 (227)
T ss_dssp TTEEEEEET-------TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------TEE
T ss_pred CCEEEEEEC-------CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC-------CEE
Confidence 589999977 359999987654311000 0013321 122333332 5679999976 347
Q ss_pred EEEeCCCC
Q 013179 156 YVLDTISL 163 (448)
Q Consensus 156 ~~yd~~t~ 163 (448)
|+||..+.
T Consensus 195 wr~d~~~~ 202 (227)
T 3lp9_A 195 ARVKVTPX 202 (227)
T ss_dssp EEEECCSS
T ss_pred EEEECCcc
Confidence 88987765
No 255
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=55.54 E-value=1.8e+02 Score=29.61 Aligned_cols=19 Identities=5% Similarity=-0.020 Sum_probs=14.5
Q ss_pred CcEEEEEcCCCceEEeccC
Q 013179 267 NDTIILDRLSAQWKRLPIG 285 (448)
Q Consensus 267 ~~v~~yd~~~~~W~~~~~~ 285 (448)
..+|.+|..+..-.++...
T Consensus 344 ~~l~~~~~~~~~~~~lT~g 362 (740)
T 4a5s_A 344 RHICYFQIDKKDCTFITKG 362 (740)
T ss_dssp EEEEEEETTCSSCEESCCS
T ss_pred eEEEEEECCCCceEecccC
Confidence 6799999988777766543
No 256
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=55.34 E-value=1.3e+02 Score=27.88 Aligned_cols=69 Identities=6% Similarity=0.046 Sum_probs=40.8
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCC-CcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLP-SPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p-~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
++.+++.|+.++ .+..+|+.+.+-...-. .+ ....-.+++...++..++.|+.++ .+..||+.+.+
T Consensus 181 ~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~---~~~h~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~~ 247 (437)
T 3gre_A 181 EKSLLVALTNLS-----RVIIFDIRTLERLQIIE---NSPRHGAVSSICIDEECCVLILGTTRG-----IIDIWDIRFNV 247 (437)
T ss_dssp SCEEEEEEETTS-----EEEEEETTTCCEEEEEE---CCGGGCCEEEEEECTTSCEEEEEETTS-----CEEEEETTTTE
T ss_pred CCCEEEEEeCCC-----eEEEEeCCCCeeeEEEc---cCCCCCceEEEEECCCCCEEEEEcCCC-----eEEEEEcCCcc
Confidence 466777776543 58999998876543321 11 112223333335567777787654 37889988765
Q ss_pred eEe
Q 013179 165 WMQ 167 (448)
Q Consensus 165 W~~ 167 (448)
...
T Consensus 248 ~~~ 250 (437)
T 3gre_A 248 LIR 250 (437)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 257
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=55.24 E-value=1.4e+02 Score=28.11 Aligned_cols=18 Identities=28% Similarity=0.525 Sum_probs=14.9
Q ss_pred CCcEEEEECCcEEEEEcC
Q 013179 21 SGHSAVNIGKSKVVVFGG 38 (448)
Q Consensus 21 ~~~~~~~~~~~~iyv~GG 38 (448)
..|++++..++.||.+|-
T Consensus 136 ~~hs~al~~~G~v~~wG~ 153 (423)
T 3mvd_K 136 DSHSACLLEDGRVFAWGS 153 (423)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred cCeEEEEeCCCeEEEEeC
Confidence 368888888899999994
No 258
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=54.97 E-value=1.8e+02 Score=29.20 Aligned_cols=66 Identities=11% Similarity=0.104 Sum_probs=36.7
Q ss_pred CceEEEEcCCCc--EEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCc--EEEee
Q 013179 46 SDVVVYDIDNKL--WFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQ--WSELT 118 (448)
Q Consensus 46 ~~~~~yd~~~~~--W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~ 118 (448)
..++.+|..+++ |+.-.... .+......+-++.++.||+-.+.........++.||..|++ |+.-.
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~-------~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 131 GNVAALNAETGETVWKVENSDI-------KVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp SEEEEEETTTCCEEEEEECCCG-------GGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CEEEEEECCCCCEEEeecCCCC-------CccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 359999998885 87532110 00001122334568888765432111123469999999875 87654
No 259
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=53.27 E-value=1.4e+02 Score=27.48 Aligned_cols=142 Identities=12% Similarity=0.068 Sum_probs=70.1
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCc---EEEeecCCCCCCcCcccEEEE-ECCc-EEEEEecCCCCccCCceEEEeC
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQ---WSELTSFGDLPSPRDFAAASA-IGNR-KIVMYGGWDGKKWLSDVYVLDT 160 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~---W~~~~~~~~~p~~r~~~~~~~-~~~~-~iyv~GG~~~~~~~~~v~~yd~ 160 (448)
++.+||.+-... ..++++++.... |-.-. ..+..+.+....+ ..++ .|++..+ -..+++||+
T Consensus 147 ~GnaYVt~s~~~----~~I~rV~pdG~~~~~~~~~~---~~~~~~~G~nGIv~~pdg~~Liv~~~------~g~L~~fD~ 213 (334)
T 2p9w_A 147 DGNSYVAFALGM----PAIARVSADGKTVSTFAWES---GNGGQRPGYSGITFDPHSNKLIAFGG------PRALTAFDV 213 (334)
T ss_dssp TSCEEEEEEESS----CEEEEECTTSCCEEEEEECC---CCSSSCCSCSEEEEETTTTEEEEESS------SSSEEEEEC
T ss_pred CCCEEEeCCCCC----CeEEEEeCCCCEEeeeeecC---CCcccccCcceEEEeCCCCEEEEEcC------CCeEEEEcC
Confidence 578999765331 359999998653 43222 1233455555444 4344 5666543 244899998
Q ss_pred CCCceEeecCC--CCCCCccCCce---eEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCC--
Q 013179 161 ISLEWMQLPVT--GSVPPPRCGHT---ATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPS-- 233 (448)
Q Consensus 161 ~t~~W~~~~~~--~~~p~~r~~~~---~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~-- 233 (448)
.+.....++.. |.. ..-.+.. ....+++++++.-... ..+.+ .+ .+.|......+..|.
T Consensus 214 ~~pv~~~v~~~~~G~~-~~~~~~dgilp~~~~G~vllV~~~~~------~~~~l-----~S--~DgW~sa~~~g~~~~~~ 279 (334)
T 2p9w_A 214 SKPYAWPEPVKINGDF-GTLSGTEKIVTVPVGNESVLVGARAP------YAISF-----RS--WDNWKSANIKKTKRSEL 279 (334)
T ss_dssp SSSSCCCEECEESSCC-CCCTTEEEEEEEEETTEEEEEEEETT------EEEEE-----EC--SSTTSEEEEEEEECGGG
T ss_pred CCCcceeecccccCCc-ccccCcccccccccCCEEEEEEcCCC------CEEEE-----EC--CCCcceeEEeeeecCcc
Confidence 74332123221 211 0111111 2235788755543211 11122 12 223877654444333
Q ss_pred -CCceeEEEE----eCCEEEEEcCCC
Q 013179 234 -SRCGHTITS----GGHYLLLFGGHG 254 (448)
Q Consensus 234 -~r~~~~~~~----~~~~i~v~GG~~ 254 (448)
++...++++ .+++||++.+.-
T Consensus 280 ~~~g~tt~t~~~~~~~~~iYvv~~~f 305 (334)
T 2p9w_A 280 QNSGFTAVADYYQGSEQGLYAVSAFF 305 (334)
T ss_dssp GSSCEEEEEEEEETTEEEEEEEECCG
T ss_pred ccCceeEEEEeccccCCeEEEEeeec
Confidence 333334444 678999998653
No 260
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=53.07 E-value=1.8e+02 Score=28.79 Aligned_cols=115 Identities=6% Similarity=-0.059 Sum_probs=54.7
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++.+++.||.++ .+.++|..+++-...-.... .............+..-+++.++.|+.++ .+..+|
T Consensus 200 pdg~~las~s~D~-----~i~lwd~~~g~~~~~~~~~~--~~~~~h~~~V~~v~~spdg~~l~s~s~D~-----~v~lWd 267 (611)
T 1nr0_A 200 PDGSLFASTGGDG-----TIVLYNGVDGTKTGVFEDDS--LKNVAHSGSVFGLTWSPDGTKIASASADK-----TIKIWN 267 (611)
T ss_dssp TTSSEEEEEETTS-----CEEEEETTTCCEEEECBCTT--SSSCSSSSCEEEEEECTTSSEEEEEETTS-----EEEEEE
T ss_pred CCCCEEEEEECCC-----cEEEEECCCCcEeeeecccc--ccccccCCCEEEEEECCCCCEEEEEeCCC-----eEEEEe
Confidence 3456666666543 47788887775432210000 00000111111111222566777777543 588899
Q ss_pred CCCCcEEEeecCCCCCCcCcc-cEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 109 TDIWQWSELTSFGDLPSPRDF-AAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~-~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
+.+.+....-. ....... ...+.. ++..++.++.++ .+..+|+.+..
T Consensus 268 ~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~l~s~s~d~-----~i~~~~~~~~~ 315 (611)
T 1nr0_A 268 VATLKVEKTIP---VGTRIEDQQLGIIW-TKQALVSISANG-----FINFVNPELGS 315 (611)
T ss_dssp TTTTEEEEEEE---CCSSGGGCEEEEEE-CSSCEEEEETTC-----CEEEEETTTTE
T ss_pred CCCCceeeeec---CCCCccceeEEEEE-cCCEEEEEeCCC-----cEEEEeCCCCC
Confidence 99887655432 1111111 122223 334555555443 36677777655
No 261
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=51.65 E-value=1.6e+02 Score=27.66 Aligned_cols=151 Identities=9% Similarity=-0.049 Sum_probs=78.6
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECC-cEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
+++||+.... -..+.++|+.+++-..+... ....+ .+...+ +.+|+...... ..++.+|..+..
T Consensus 141 ~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~-----~~~~~-ia~~~~g~~l~~~d~~~~----~~I~~~d~~~~~ 205 (409)
T 3hrp_A 141 NNTVLAYQRD-----DPRVRLISVDDNKVTTVHPG-----FKGGK-PAVTKDKQRVYSIGWEGT----HTVYVYMKASGW 205 (409)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTTEEEEEEET-----CCBCB-CEECTTSSEEEEEBSSTT----CEEEEEEGGGTT
T ss_pred CCCEEEEecC-----CCcEEEEECCCCEEEEeecc-----CCCCc-eeEecCCCcEEEEecCCC----ceEEEEEcCCCc
Confidence 5789998652 23599999998887766542 11122 333333 35666543211 168999986543
Q ss_pred e-EeecCCCCCCCccCCceeEEe--CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCce--eE
Q 013179 165 W-MQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCG--HT 239 (448)
Q Consensus 165 W-~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~--~~ 239 (448)
- ..+... ..+....-+.+++. ++.||+... . ..+.+||+++.....+...+........ +.
T Consensus 206 ~~~~~g~~-~~~~~~~p~~iav~p~~g~lyv~d~---~----------~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ 271 (409)
T 3hrp_A 206 APTRIGQL-GSTFSGKIGAVALDETEEWLYFVDS---N----------KNFGRFNVKTQEVTLIKQLELSGSLGTNPGPY 271 (409)
T ss_dssp CEEEEEEC-CTTSCSCCCBCEECTTSSEEEEECT---T----------CEEEEEETTTCCEEEEEECCCCSCCCCSSCCE
T ss_pred eeEEeeec-cchhcCCcEEEEEeCCCCeEEEEEC---C----------CcEEEEECCCCCEEEEecccccCCCCCCcccc
Confidence 2 233100 01011222344444 578888321 1 2344568877765555211111111111 14
Q ss_pred EEEe--CCEEEEEcCCCCCCCcccccceeCcEEEEEcCCC
Q 013179 240 ITSG--GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSA 277 (448)
Q Consensus 240 ~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 277 (448)
+++. ++.||+.... .+.|++||+...
T Consensus 272 ia~~p~~g~lyv~d~~------------~~~I~~~~~~g~ 299 (409)
T 3hrp_A 272 LIYYFVDSNFYMSDQN------------LSSVYKITPDGE 299 (409)
T ss_dssp EEEETTTTEEEEEETT------------TTEEEEECTTCC
T ss_pred EEEeCCCCEEEEEeCC------------CCEEEEEecCCC
Confidence 4443 5899997532 256999998765
No 262
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=50.31 E-value=1.3e+02 Score=26.28 Aligned_cols=66 Identities=11% Similarity=0.084 Sum_probs=34.6
Q ss_pred cEEEEEcCCCCCcccCceEEEEcCCC-------cEEeeeecCCCCCCCCCCCCCcceeEEEEC--CeEEEEcccCCCCCC
Q 013179 31 SKVVVFGGLVDKRFLSDVVVYDIDNK-------LWFQPECTGNGSNGQVGPGPRAFHIAVAID--CHMFIFGGRFGSRRL 101 (448)
Q Consensus 31 ~~iyv~GG~~~~~~~~~~~~yd~~~~-------~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~--~~lyv~GG~~~~~~~ 101 (448)
+.+++.|+.++ .+.+||+.+. .|..+.... .........++.-+ +.+++.|+.++
T Consensus 71 ~~~l~s~~~dg-----~v~vwd~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~l~~~~~dg---- 134 (351)
T 3f3f_A 71 GRIIASASYDK-----TVKLWEEDPDQEECSGRRWNKLCTLN-------DSKGSLYSVKFAPAHLGLKLACLGNDG---- 134 (351)
T ss_dssp CSEEEEEETTS-----CEEEEEECTTSCTTSSCSEEEEEEEC-------CCSSCEEEEEECCGGGCSEEEEEETTC----
T ss_pred CCEEEEEcCCC-----eEEEEecCCCcccccccCcceeeeec-------ccCCceeEEEEcCCCCCcEEEEecCCC----
Confidence 66777777643 4778888764 334433221 11111111222223 56677776543
Q ss_pred CcEEEEECCCCc
Q 013179 102 GDFWVLDTDIWQ 113 (448)
Q Consensus 102 ~~~~~~d~~t~~ 113 (448)
.+..||+.+.+
T Consensus 135 -~v~iwd~~~~~ 145 (351)
T 3f3f_A 135 -ILRLYDALEPS 145 (351)
T ss_dssp -EEEEEECSSTT
T ss_pred -cEEEecCCChH
Confidence 47888876544
No 263
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=50.04 E-value=2.4e+02 Score=29.29 Aligned_cols=210 Identities=10% Similarity=0.158 Sum_probs=101.3
Q ss_pred ceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEEC---CeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCC
Q 013179 47 DVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAID---CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL 123 (448)
Q Consensus 47 ~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~---~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~ 123 (448)
-+++-+-.-.+|+.+..... +.....+.-+++++.. +.+|+..|.........+++=+-.-.+|+++......
T Consensus 38 gv~rS~DgG~tW~~~~~~~~----~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~ 113 (789)
T 1sqj_A 38 GAYRWDAGTSKWIPLNDFIE----AQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPM 113 (789)
T ss_dssp CEEEEETTTTEEEESCTTCC----GGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCC
T ss_pred CEEEecCCCCCeeECccCCC----cccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCccc
Confidence 37777777789998752100 0000122344444432 4688876642211113455555556789998631111
Q ss_pred C---CcC-cccEEEEEC--CcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe----CCEEEEE
Q 013179 124 P---SPR-DFAAASAIG--NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV----EKRLLIY 193 (448)
Q Consensus 124 p---~~r-~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~----~~~lyv~ 193 (448)
+ ..| ..+..++.. .+.+|+ |... ..+++=+-.-.+|+++.....+...-.+...+.+ .+.+|+.
T Consensus 114 ~~~~~~~~~~~~iav~p~~~~~v~~-g~~~-----~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~ 187 (789)
T 1sqj_A 114 GANDMGRNNGERLAVNPFNSNEVWM-GTRT-----EGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYAS 187 (789)
T ss_dssp CTTSTTTTSCCCEEEETTEEEEEEE-ECSS-----SCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEE
T ss_pred CccCCCccceeEEEEcCCCCCEEEE-Eecc-----CCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEE
Confidence 0 122 223344432 235666 4321 3355544445789998621111011122222332 2467765
Q ss_pred cccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCC----------------CceeEEEEe--CCEEEEEcCCCC
Q 013179 194 GGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSS----------------RCGHTITSG--GHYLLLFGGHGT 255 (448)
Q Consensus 194 GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~----------------r~~~~~~~~--~~~i~v~GG~~~ 255 (448)
.... .-++.. .-...+|+.+. ..|.. ...|.+++. .+.||+..+...
T Consensus 188 ~~~~------~~v~~S------~DgG~TW~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~ 252 (789)
T 1sqj_A 188 ATAP------QGMYVT------HDGGVSWEPVA---GQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYP 252 (789)
T ss_dssp ESST------TCEEEE------SSTTSSCEECT---TCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSC
T ss_pred EcCC------CeEEEE------cCCCcCcccCC---CCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCC
Confidence 4321 112222 22567899886 22221 111444443 788888743211
Q ss_pred CCCcccccceeCcEEEEEcCCCceEEeccC
Q 013179 256 GGWLSRYDIYYNDTIILDRLSAQWKRLPIG 285 (448)
Q Consensus 256 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~ 285 (448)
.. +......||+.+-...+|+++...
T Consensus 253 ~p----~~g~~g~l~~S~DgG~tW~~~~~~ 278 (789)
T 1sqj_A 253 GP----WGVTFGEVWRQNRTSGAWDDITPR 278 (789)
T ss_dssp SS----SCCCCCCEEEEETTTCCEEECCCC
T ss_pred CC----CCCCCceEEEEeCCCCceEECcCC
Confidence 00 001235689999899999998763
No 264
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=48.72 E-value=1.3e+02 Score=30.36 Aligned_cols=65 Identities=22% Similarity=0.257 Sum_probs=35.6
Q ss_pred eEEEECCeEEEEcccCCCCCCCcEEEEECCCC-cEEEeecC---CCCCCcCcccEEEEECCcEEEEEecCCCCccCCceE
Q 013179 81 IAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIW-QWSELTSF---GDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVY 156 (448)
Q Consensus 81 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~-~W~~~~~~---~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~ 156 (448)
++...++++|+|=|. .+|+++.... ........ ..+|.. ...+.....++++|+|=| +..|
T Consensus 448 Ait~~rg~~yfFKg~-------~yWr~~~~~~~~~~P~~Is~~wp~LP~~-IDAA~~~~~~~k~yFFkG-------~~yW 512 (631)
T 1ck7_A 448 GIAQIRGEIFFFKDR-------FIWRTVTPRDKPMGPLLVATFWPELPEK-IDAVYEAPQEEKAVFFAG-------NEYW 512 (631)
T ss_dssp EEEECSSSEEEECSS-------EEEEESCTTSCCEEEEEGGGTCTTSCSS-CSBCCEETTTTEEEEEET-------TEEE
T ss_pred eeEecCCcEEEEcCC-------EEEEEcCCCCCCCCceeccccCCCCCcc-ceEEEEECCCCEEEEEec-------CEEE
Confidence 445568899999762 4788876542 22221111 124432 222222224568999966 3478
Q ss_pred EEeC
Q 013179 157 VLDT 160 (448)
Q Consensus 157 ~yd~ 160 (448)
+|+-
T Consensus 513 ry~~ 516 (631)
T 1ck7_A 513 IYSA 516 (631)
T ss_dssp EEET
T ss_pred EECC
Confidence 8874
No 265
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=48.09 E-value=1.6e+02 Score=26.79 Aligned_cols=131 Identities=9% Similarity=-0.056 Sum_probs=62.2
Q ss_pred CceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCC
Q 013179 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPS 125 (448)
Q Consensus 46 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~ 125 (448)
..+.++|+.+.+-...... .......++.-++++++.|+. +.+.+++..++.-..... ...
T Consensus 157 ~~i~iwd~~~~~~~~~~~~----------~~~V~~v~fspdg~~l~s~s~------~~~~~~~~~~~~~~~~~~---~~~ 217 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIET----------RGEVKDLHFSTDGKVVAYITG------SSLEVISTVTGSCIARKT---DFD 217 (365)
T ss_dssp CEEEEEETTTTEEEEEEEC----------SSCCCEEEECTTSSEEEEECS------SCEEEEETTTCCEEEEEC---CCC
T ss_pred CEEEEeECCCCcEEEEeCC----------CCceEEEEEccCCceEEeccc------eeEEEEEeccCcceeeee---cCC
Confidence 3488899998875433211 111222223335666666542 247788888777554332 111
Q ss_pred cCc-ccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCc-eeEEe-CCEEEEEcccC
Q 013179 126 PRD-FAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH-TATMV-EKRLLIYGGRG 197 (448)
Q Consensus 126 ~r~-~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~ 197 (448)
... ..+++...++..++.++.++.. ...++.+|............ ........- +++.. ++++++.|+.+
T Consensus 218 ~~~~v~~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~-~~~~~~~~V~~~~~Spdg~~lasgs~D 290 (365)
T 4h5i_A 218 KNWSLSKINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSK-QVTNRFKGITSMDVDMKGELAVLASND 290 (365)
T ss_dssp TTEEEEEEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEE-EEESSCSCEEEEEECTTSCEEEEEETT
T ss_pred CCCCEEEEEEcCCCCEEEEEecCCcc-eeEEeecccccceecceeee-eecCCCCCeEeEEECCCCCceEEEcCC
Confidence 111 1222333556777777654432 12356666665554433200 001111111 22222 67778888764
No 266
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=47.56 E-value=1.7e+02 Score=26.77 Aligned_cols=115 Identities=14% Similarity=0.139 Sum_probs=57.5
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEE
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d 108 (448)
.++..++.|+.++ .+.+||+.+++-...-.... .......+.....++..++++++.|+.++ .+.++|
T Consensus 259 p~~~~l~s~s~D~-----~i~lwd~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~g~~l~~g~~dg-----~i~vwd 326 (380)
T 3iz6_a 259 PDGQRFGTGSDDG-----TCRLFDMRTGHQLQVYNREP--DRNDNELPIVTSVAFSISGRLLFAGYSNG-----DCYVWD 326 (380)
T ss_dssp TTSSEEEEECSSS-----CEEEEETTTTEEEEEECCCC--SSSCCSSCSCSEEEECSSSSEEEEECTTS-----CEEEEE
T ss_pred cCCCeEEEEcCCC-----eEEEEECCCCcEEEEecccc--cccccccCceEEEEECCCCCEEEEEECCC-----CEEEEE
Confidence 4466777777543 48889998875432211100 00000111122223334667777776543 488999
Q ss_pred CCCCcEEEeecCCCCCCcC--cccEEEEECCcEEEEEecCCCCccCCceEEEeCCC
Q 013179 109 TDIWQWSELTSFGDLPSPR--DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (448)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r--~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t 162 (448)
..+.+-..... .+..+. .-.+++...++..++.|+.++. +..+++..
T Consensus 327 ~~~~~~~~~~~--~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~-----i~iW~~~~ 375 (380)
T 3iz6_a 327 TLLAEMVLNLG--TLQNSHEGRISCLGLSSDGSALCTGSWDKN-----LKIWAFSG 375 (380)
T ss_dssp TTTCCEEEEEC--CSCSSCCCCCCEEEECSSSSEEEEECTTSC-----EEEEECCS
T ss_pred CCCCceEEEEe--cccCCCCCceEEEEECCCCCEEEEeeCCCC-----EEEEecCC
Confidence 88776543221 111111 1123333456677888886653 55666543
No 267
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=47.51 E-value=1.8e+02 Score=27.24 Aligned_cols=60 Identities=7% Similarity=-0.020 Sum_probs=32.4
Q ss_pred ceeEEE--ECCeEEEEcccCCCC------CCCc-EEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEec
Q 013179 79 FHIAVA--IDCHMFIFGGRFGSR------RLGD-FWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGG 145 (448)
Q Consensus 79 ~h~~~~--~~~~lyv~GG~~~~~------~~~~-~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG 145 (448)
.|+++. .++.+|.+|-..... .... ..-..........+.. -..|+++...++.+|.+|-
T Consensus 252 ~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~-------G~~ht~alt~~G~v~~wG~ 320 (423)
T 3mvd_K 252 YCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAG-------GQHHTVILTTDLKCSVVGR 320 (423)
T ss_dssp TEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEE-------CSSEEEEEETTCCEEEEEC
T ss_pred cEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEc-------ccCeEEEEeCCCcEEEEEC
Confidence 456655 367999998533211 0011 1111111233444432 2468888888889999985
No 268
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=46.98 E-value=2e+02 Score=27.59 Aligned_cols=144 Identities=11% Similarity=0.080 Sum_probs=70.3
Q ss_pred EEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE--CCeEEEEcccCCCCCC
Q 013179 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRL 101 (448)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv~GG~~~~~~~ 101 (448)
+++.+. +.+|+|=|. .+|+++.....+........ =+.+|. .--++... ++++|+|=|
T Consensus 267 Ai~~~~-ge~y~Fkg~-------~~wr~~~~~~~~~p~~I~~~---Wp~LP~--~iDAa~~~~~~g~~~fFKg------- 326 (450)
T 1su3_A 267 AITTIR-GEVMFFKDR-------FYMRTNPFYPEVELNFISVF---WPQLPN--GLEAAYEFADRDEVRFFKG------- 326 (450)
T ss_dssp EEEEET-TEEEEEETT-------EEEECCTTSSSCEEEEGGGT---CTTSCS--SCCEEEEEGGGTEEEEEET-------
T ss_pred eEEecC-CeEEEEeCC-------EEEEEcCCCCcccceehhHh---ccCCCC--CeeEEEEEcCCCeEEEEeC-------
Confidence 333344 789999883 36666655443332221110 001222 22333333 689999976
Q ss_pred CcEEEEECCCCc--E-EEeecCCCCCCc-CcccEEEEE-CCcEEEEEecCCCCccCCceEEEeCCCCceEe-----ecC-
Q 013179 102 GDFWVLDTDIWQ--W-SELTSFGDLPSP-RDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ-----LPV- 170 (448)
Q Consensus 102 ~~~~~~d~~t~~--W-~~~~~~~~~p~~-r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~-----~~~- 170 (448)
+.+|+|+..+.. + ..+...-.+|.. ..--++... .++++|+|=| +..|+||..+.+-.. +..
T Consensus 327 ~~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~ 399 (450)
T 1su3_A 327 NKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHD 399 (450)
T ss_dssp TEEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHH
T ss_pred CEEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhc
Confidence 248888753210 0 112100023332 112233333 4579999976 458999876543221 110
Q ss_pred CCCCCCccCCceeEEeCCEEEEEccc
Q 013179 171 TGSVPPPRCGHTATMVEKRLLIYGGR 196 (448)
Q Consensus 171 ~~~~p~~r~~~~~~~~~~~lyv~GG~ 196 (448)
-..+| ..-.++...++++|.|-|.
T Consensus 400 fpgip--~~iDAA~~~~g~~YFFkg~ 423 (450)
T 1su3_A 400 FPGIG--HKVDAVFMKDGFFYFFHGT 423 (450)
T ss_dssp STTSC--SCCSEEEEETTEEEEEETT
T ss_pred CCCCC--CCccEEEEcCCeEEEEeCC
Confidence 00122 2223444568999999774
No 269
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=46.88 E-value=2.4e+02 Score=28.34 Aligned_cols=109 Identities=8% Similarity=0.005 Sum_probs=57.3
Q ss_pred ceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCC----CCCCcEEEEECCCCcEEEeecCCC
Q 013179 47 DVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS----RRLGDFWVLDTDIWQWSELTSFGD 122 (448)
Q Consensus 47 ~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~----~~~~~~~~~d~~t~~W~~~~~~~~ 122 (448)
.++.+|+.+++-..+.... .....+....++.-+++.++++..... .....++.+|+.+++-.++.....
T Consensus 38 ~i~~~d~~~g~~~~~~~~~------~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 111 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGK------KIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEV 111 (723)
T ss_dssp CEEEBCGGGCCCEEEECTT------TTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTC
T ss_pred CEEEEECCCCcEEEEeccc------cccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcc
Confidence 6899999988655443211 000001222233336665566544322 224679999999988766653111
Q ss_pred CCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEeec
Q 013179 123 LPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLP 169 (448)
Q Consensus 123 ~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~ 169 (448)
...+ ....+...+++.++++.. ..++.+|..+.+-.++.
T Consensus 112 -~~~~-~~~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 112 -SNAK-LQYAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp -CSCC-CSBCCBCSSTTCEEEEET------TEEEEESSSSSCCEEEE
T ss_pred -cccc-ccccEECCCCCEEEEEEC------CeEEEEECCCCceEEEe
Confidence 0001 111222234444444432 36899999888777665
No 270
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=46.26 E-value=1.2e+02 Score=30.31 Aligned_cols=77 Identities=16% Similarity=0.080 Sum_probs=46.3
Q ss_pred cCceEEEEcCCCc--EEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCc--EEEeecC
Q 013179 45 LSDVVVYDIDNKL--WFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQ--WSELTSF 120 (448)
Q Consensus 45 ~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~--W~~~~~~ 120 (448)
...+..+|+.+++ |+.-. +.+..+...+..++.+|+ |..+ ..++.||.+|++ |+.-.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~-----------~~~~~~g~~~tagglvf~-g~~d-----g~l~A~D~~tG~~lW~~~~-- 525 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE-----------HLPLWAGVLATAGNLVFT-GTGD-----GYFKAFDAKSGKELWKFQT-- 525 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE-----------SSCCCSCCEEETTTEEEE-ECTT-----SEEEEEETTTCCEEEEEEC--
T ss_pred cceEEEEECCCCCEEEEecC-----------CCCCcccceEeCCCEEEE-ECCC-----CcEEEEECCCCCEEEEecC--
Confidence 3568999999885 87643 223344444555677776 4322 358999999886 76643
Q ss_pred CCCCCcCcccEEEEECCcEEEEE
Q 013179 121 GDLPSPRDFAAASAIGNRKIVMY 143 (448)
Q Consensus 121 ~~~p~~r~~~~~~~~~~~~iyv~ 143 (448)
+.+.....++...+++.||.
T Consensus 526 ---~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 526 ---GSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp ---SSCCCSCCEEEEETTEEEEE
T ss_pred ---CCCcccCceEEEECCEEEEE
Confidence 33333333333235687776
No 271
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=46.07 E-value=1.4e+02 Score=25.54 Aligned_cols=115 Identities=15% Similarity=0.106 Sum_probs=60.8
Q ss_pred EEEEECCcEEEEEcCCCCCcccCceEEEEcCCC----cEEeeeecCCCCCCCCCCCC----CcceeEEE--ECCeEEEEc
Q 013179 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNK----LWFQPECTGNGSNGQVGPGP----RAFHIAVA--IDCHMFIFG 93 (448)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~----~W~~~~~~~~~~~~~~~p~~----R~~h~~~~--~~~~lyv~G 93 (448)
+++...++.+|+|=| +.+|+||..++ ....-+..-. .-=+.+|.. .. -++.. .++++|+|-
T Consensus 64 Aa~~~~~g~~~fFkg-------~~~W~~d~~~~t~~~~~~~gP~~I~-~~wp~LP~~~~~~~I-DAA~~~~~~gk~yfFk 134 (225)
T 3oyo_A 64 CSFHTEASEAYVFSG-------NHSAYIDYAPGTTNDKILVGPTTIA-EMFPVLNNTVFEDSI-DSAFRSTKGKEVYLFK 134 (225)
T ss_dssp EEEECSTTEEEEEET-------TEEEEEECCTTSSCCEEEEEEEEHH-HHCGGGTTSTTTSCC-CEEEECSSTTEEEEEE
T ss_pred EEEEcCCCeEEEEcC-------CEEEEEecccccCCCceecCchhhh-hcCCCCCCccccccc-ceEEEECCCCcEEEEe
Confidence 333335688999988 45899986432 2111010000 000012221 22 23333 368999997
Q ss_pred ccCCCCCCCcEEEEECCCCcEEEee--cCCCCCC------cCcccEEEEE-CCcEEEEEecCCCCccCCceEEEeCC
Q 013179 94 GRFGSRRLGDFWVLDTDIWQWSELT--SFGDLPS------PRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTI 161 (448)
Q Consensus 94 G~~~~~~~~~~~~~d~~t~~W~~~~--~~~~~p~------~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~ 161 (448)
| +.+|+||..+.+...-+ .....|. +..--++... .++++|+|-| +..|+||..
T Consensus 135 G-------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~ywr~d~~ 197 (225)
T 3oyo_A 135 G-------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYVRIDFT 197 (225)
T ss_dssp T-------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEECC
T ss_pred C-------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCC
Confidence 7 35899998777655421 0001222 2222333333 5679999976 357899987
No 272
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=45.54 E-value=2.6e+02 Score=28.48 Aligned_cols=152 Identities=11% Similarity=-0.004 Sum_probs=77.3
Q ss_pred ECCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEE-CCcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 85 IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 85 ~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
.+++||+.-. ..+.+.++++....-+.+... .+..++ ..++. .++.||+.-- .....|+++++...
T Consensus 463 ~~g~LY~tD~-----~~~~I~v~d~dg~~~~~l~~~-~~~~P~---giavDp~~g~ly~td~----~~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 463 IHSNIYWTDS-----VLGTVSVADTKGVKRKTLFRE-QGSKPR---AIVVDPVHGFMYWTDW----GTPAKIKKGGLNGV 529 (699)
T ss_dssp SSSBCEECCT-----TTSCEEEEBSSSCCEEEECCC-SSCCCC---CEECCSSSSCCEECCC----SSSCCEEBCCSSSC
T ss_pred eCCcEEEEec-----cCCeEEEEecCCCceEEEEeC-CCCCcc---eEEEccCCCcEEEccc----CCCCeEEEEeCCCC
Confidence 3678888632 234589999887655444321 122222 22232 2457887531 11246788877654
Q ss_pred ceEeecCCCCCCCccCCceeEEe--CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEE
Q 013179 164 EWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTIT 241 (448)
Q Consensus 164 ~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~ 241 (448)
.-+.+... .+..| ..+++. +++||+.-... +.++++|+....-..+... ........+++
T Consensus 530 ~~~~l~~~-~l~~P---nGlavd~~~~~LY~aD~~~------------~~I~~~d~dG~~~~~~~~~--~~~~~~P~gla 591 (699)
T 1n7d_A 530 DIYSLVTE-NIQWP---NGITLDLLSGRLYWVDSKL------------HSISSIDVNGGNRKTILED--EKRLAHPFSLA 591 (699)
T ss_dssp CCCEESCS-SCSSC---CCEEECTTTCCEEEEETTT------------TEEEEECSSSSCCEEECCC--SSSCSSCCCCE
T ss_pred CeeEEEeC-CCCCc---cEEEEeccCCEEEEEecCC------------CeEEEEccCCCceEEEEec--CCcCCCceEeE
Confidence 33333211 11111 233333 57888865321 3345557655444444311 01112234566
Q ss_pred EeCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCce
Q 013179 242 SGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQW 279 (448)
Q Consensus 242 ~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W 279 (448)
+.++.||+.-... +.|.++|+.+.+-
T Consensus 592 vd~~~lywtd~~~------------~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 592 VFEDKVFWTDIIN------------EAIFSANRLTGSD 617 (699)
T ss_dssp EETTEEEEECSTT------------TCEEEEETTTEEE
T ss_pred EECCEEEEEeCCC------------CeEEEEEccCCCc
Confidence 7788999886322 4689999765543
No 273
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=43.89 E-value=1.4e+02 Score=24.89 Aligned_cols=143 Identities=16% Similarity=0.186 Sum_probs=69.2
Q ss_pred EEEEECCcEEEEEcCCCCCcccCceEEEEcCCCc--E-EeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCC
Q 013179 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKL--W-FQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRR 100 (448)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W-~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~ 100 (448)
+++.+. +.+|+|-| +.+|+++...-. . ..+... -+.+|. ...++....++++|+|-|
T Consensus 10 A~~~~~-g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~-----w~glP~-~iDAa~~~~~g~~yfFkg------ 69 (196)
T 3c7x_A 10 TVAMLR-GEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQF-----WRGLPA-SINTAYERKDGKFVFFKG------ 69 (196)
T ss_dssp EEEEET-TEEEEEET-------TEEEEEETTEECTTCSEEHHHH-----STTCCS-SCCEEEECTTSCEEEEET------
T ss_pred EEEEcC-CEEEEEEC-------CEEEEEECCccCCCCceEhhHh-----ccCCCC-CccEEEEeCCCcEEEecC------
Confidence 333344 78999987 347777533100 0 111110 012333 233322224678999976
Q ss_pred CCcEEEEECCCCcE---EEeecCC-CCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEe-----ecCC
Q 013179 101 LGDFWVLDTDIWQW---SELTSFG-DLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ-----LPVT 171 (448)
Q Consensus 101 ~~~~~~~d~~t~~W---~~~~~~~-~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~-----~~~~ 171 (448)
+.+|+|+..+... +.+.... .+|...-..+.....++++|+|=| +..|+||..+++-.. ++.-
T Consensus 70 -~~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~ 141 (196)
T 3c7x_A 70 -DKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVW 141 (196)
T ss_dssp -TEEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGS
T ss_pred -CEEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHC
Confidence 3589998643211 1222211 245333333222224679999976 347899987654321 1100
Q ss_pred CCCCCccCCceeEEe-CC-EEEEEccc
Q 013179 172 GSVPPPRCGHTATMV-EK-RLLIYGGR 196 (448)
Q Consensus 172 ~~~p~~r~~~~~~~~-~~-~lyv~GG~ 196 (448)
..+|. .-.++... ++ ++|+|-|.
T Consensus 142 ~gip~--~idaAf~~~~~~~~YfFkg~ 166 (196)
T 3c7x_A 142 EGIPE--SPRGSFMGSDEVFTYFYKGN 166 (196)
T ss_dssp BTCCS--SCSEEEECTTSSEEEEEETT
T ss_pred CCcCC--CcceeEEecCCCEEEEEECC
Confidence 01221 22333334 44 89998774
No 274
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=43.62 E-value=2e+02 Score=26.45 Aligned_cols=147 Identities=12% Similarity=0.098 Sum_probs=69.9
Q ss_pred EEEECCcEEEEEecCCCCccCCceEEEeCCCCc---eEeecCCCCCCCccCCcee-EEe--CCEEEEEcccCCCCCccCc
Q 013179 132 ASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE---WMQLPVTGSVPPPRCGHTA-TMV--EKRLLIYGGRGGGGPIMGD 205 (448)
Q Consensus 132 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~---W~~~~~~~~~p~~r~~~~~-~~~--~~~lyv~GG~~~~~~~~~d 205 (448)
+++-.++.+||.+-.. +..+++++++... |-.-. +....+.+..- +.. ++.|++..+ .+ .
T Consensus 142 vavD~~GnaYVt~s~~----~~~I~rV~pdG~~~~~~~~~~---~~~~~~~G~nGIv~~pdg~~Liv~~~-~g------~ 207 (334)
T 2p9w_A 142 SAQDRDGNSYVAFALG----MPAIARVSADGKTVSTFAWES---GNGGQRPGYSGITFDPHSNKLIAFGG-PR------A 207 (334)
T ss_dssp EEECTTSCEEEEEEES----SCEEEEECTTSCCEEEEEECC---CCSSSCCSCSEEEEETTTTEEEEESS-SS------S
T ss_pred eEECCCCCEEEeCCCC----CCeEEEEeCCCCEEeeeeecC---CCcccccCcceEEEeCCCCEEEEEcC-CC------e
Confidence 4444677999976432 1559999987543 43211 22233444444 444 346777665 21 1
Q ss_pred eeeecccccccCCCCceEEecCC--CCCCCCCceeE--EEEeCCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEE
Q 013179 206 LWALKGLIEEENETPGWTQLKLP--GQAPSSRCGHT--ITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR 281 (448)
Q Consensus 206 ~~~~~~~~~yd~~~~~W~~~~~~--g~~p~~r~~~~--~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 281 (448)
+ ..+|+.+.....++.. |........-. ..-.+++++++.-.. +..+++--..+ |+.
T Consensus 208 L------~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~------------~~~~~l~S~Dg-W~s 268 (334)
T 2p9w_A 208 L------TAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARA------------PYAISFRSWDN-WKS 268 (334)
T ss_dssp E------EEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEET------------TEEEEEECSST-TSE
T ss_pred E------EEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCC------------CCEEEEECCCC-cce
Confidence 2 3336553332122221 21101111112 222677875554211 23455554444 877
Q ss_pred eccCCCCCC---CccceEEEE----ECCEEEEEccCC
Q 013179 282 LPIGNEPPP---ARAYHSMTC----LGSLYLLFGGFD 311 (448)
Q Consensus 282 ~~~~~~~p~---~r~~~~~~~----~~~~i~v~GG~~ 311 (448)
.......|. ++...+++. .+++||++.+.-
T Consensus 269 a~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~f 305 (334)
T 2p9w_A 269 ANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAFF 305 (334)
T ss_dssp EEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECCG
T ss_pred eEEeeeecCccccCceeEEEEeccccCCeEEEEeeec
Confidence 544332222 233333334 468999987643
No 275
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=41.95 E-value=2.9e+02 Score=27.90 Aligned_cols=114 Identities=14% Similarity=0.206 Sum_probs=56.3
Q ss_pred cEEEEECCcEEEEEcCCCCCcccCceEEEEcCCC-cEEeeeecCCCCCCCCCCCCCcceeEEEE--CCeEEEEcccCCCC
Q 013179 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNK-LWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSR 99 (448)
Q Consensus 23 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv~GG~~~~~ 99 (448)
.-++...++.+|+|=| +.+|+++.... .......... -+.+|. .. -+++.. ++++|+|=|
T Consensus 446 fDAit~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~---wp~LP~-~I-DAA~~~~~~~k~yFFkG----- 508 (631)
T 1ck7_A 446 FDGIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATF---WPELPE-KI-DAVYEAPQEEKAVFFAG----- 508 (631)
T ss_dssp CSEEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGT---CTTSCS-SC-SBCCEETTTTEEEEEET-----
T ss_pred cceeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceecccc---CCCCCc-cc-eEEEEECCCCEEEEEec-----
Confidence 3344444578999987 34777766542 2222211100 011221 22 233333 578999966
Q ss_pred CCCcEEEEECCCC--cE-EEeecCCCCCCc--CcccEEEE-ECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 100 RLGDFWVLDTDIW--QW-SELTSFGDLPSP--RDFAAASA-IGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 100 ~~~~~~~~d~~t~--~W-~~~~~~~~~p~~--r~~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
+.+|+|+..+. -+ +.+... .+|.. +-.. +.. -.++++|+|-| +..|+||..+++
T Consensus 509 --~~yWry~~~~l~~GYPk~Is~~-G~P~~~~~IDA-Af~~~~~gktYFFkG-------~~ywryd~~~~~ 568 (631)
T 1ck7_A 509 --NEYWIYSASTLERGYPKPLTSL-GLPPDVQRVDA-AFNWSKNKKTYIFAG-------DKFWRYNEVKKK 568 (631)
T ss_dssp --TEEEEEETTEECTTCCEEGGGG-TCCTTCCCCCB-CCCCTTTCEEEEEET-------TEEEEEETTTTE
T ss_pred --CEEEEECCCccccCCCccchhc-CCCCCCCccee-EEEecCCCeEEEEEC-------CEEEEEcCCccc
Confidence 35899986321 01 112111 12321 1111 112 14679999976 358899976653
No 276
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=41.79 E-value=2.2e+02 Score=26.57 Aligned_cols=104 Identities=10% Similarity=-0.012 Sum_probs=52.2
Q ss_pred CCcEEEEECCcEEEEEcCCCCC----cccCceEEEEcC------C--CcEEeeeecCCCCCCCCCCCCCcceeEEEE-CC
Q 013179 21 SGHSAVNIGKSKVVVFGGLVDK----RFLSDVVVYDID------N--KLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DC 87 (448)
Q Consensus 21 ~~~~~~~~~~~~iyv~GG~~~~----~~~~~~~~yd~~------~--~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~ 87 (448)
..|++++..++.||.+|--..+ ....+. +.|. . .++..+.+ -..|++++. ++
T Consensus 241 ~~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~--~~P~~v~~l~~~~~~v~~ia~-------------G~~hs~al~~~G 305 (413)
T 1a12_A 241 AYFTFAISHEGHVYGFGLSNYHQLGTPGTESC--FIPQNLTSFKNSTKSWVGFSG-------------GQHHTVCMDSEG 305 (413)
T ss_dssp TTEEEEEETTCCEEEEECCTTSTTSCSSCSCE--EEEEECGGGCCTTCCEEEEEE-------------CSSEEEEEETTS
T ss_pred CCEEEEEeCCCCEEEEeCCCCcCCCCCCCCcc--cccEEchhccCCCceEEEEec-------------ccceEEEEeCCC
Confidence 3577777888999999953211 111111 1121 0 22333332 135766665 67
Q ss_pred eEEEEcccCC----CC-CCCcEEEEE-C-CCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecC
Q 013179 88 HMFIFGGRFG----SR-RLGDFWVLD-T-DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGW 146 (448)
Q Consensus 88 ~lyv~GG~~~----~~-~~~~~~~~d-~-~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~ 146 (448)
++|.+|--.. .. ...+...-- + .-.....+.. -..|++++..++++|..|--
T Consensus 306 ~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~l~~v~~v~~-------G~~hs~alt~~G~v~~wG~n 364 (413)
T 1a12_A 306 KAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVAC-------GASVGYAVTKDGRVFAWGMG 364 (413)
T ss_dssp CEEEEECCGGGTTCSCTTCCCEEEEEECCSSSSEEEEEE-------CSSEEEEEETTSCEEEEECC
T ss_pred CEEEeeCCCCCccCCCCCCccccCCEEecccCceeEEEE-------CcceEEEEeCCCCEEEecCC
Confidence 9999985321 11 111111100 0 0013333332 24577888888899999853
No 277
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=41.56 E-value=1.7e+02 Score=25.08 Aligned_cols=98 Identities=11% Similarity=0.143 Sum_probs=51.3
Q ss_pred ECCeEEEEcccCCCCCCCcEEEEECCCC----cEEE----eec-CCCCCCc--C-cccEEEEE-CCcEEEEEecCCCCcc
Q 013179 85 IDCHMFIFGGRFGSRRLGDFWVLDTDIW----QWSE----LTS-FGDLPSP--R-DFAAASAI-GNRKIVMYGGWDGKKW 151 (448)
Q Consensus 85 ~~~~lyv~GG~~~~~~~~~~~~~d~~t~----~W~~----~~~-~~~~p~~--r-~~~~~~~~-~~~~iyv~GG~~~~~~ 151 (448)
.++++|+|=| +.+|+||..++ .... +.. -..+|.. . .--++... .++++|+|-|
T Consensus 69 ~~g~~~fFkg-------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG------ 135 (225)
T 3oyo_A 69 EASEAYVFSG-------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG------ 135 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET------
T ss_pred CCCeEEEEcC-------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC------
Confidence 5789999977 35899986432 2211 110 0123331 0 11223232 4679999976
Q ss_pred CCceEEEeCCCCceEeec--CCCCCCC------ccCCceeEEe--CCEEEEEccc
Q 013179 152 LSDVYVLDTISLEWMQLP--VTGSVPP------PRCGHTATMV--EKRLLIYGGR 196 (448)
Q Consensus 152 ~~~v~~yd~~t~~W~~~~--~~~~~p~------~r~~~~~~~~--~~~lyv~GG~ 196 (448)
+..|+||..+.+...-+ .....|. +..-.++... ++++|+|-|.
T Consensus 136 -~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~ 189 (225)
T 3oyo_A 136 -NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ 189 (225)
T ss_dssp -TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT
T ss_pred -CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC
Confidence 45789997666544310 0001111 2222344443 7899999874
No 278
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=41.08 E-value=2.4e+02 Score=26.79 Aligned_cols=197 Identities=16% Similarity=0.215 Sum_probs=97.4
Q ss_pred EEEEE--CCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEE--E----eCCCCceEeecCCCCCC
Q 013179 104 FWVLD--TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYV--L----DTISLEWMQLPVTGSVP 175 (448)
Q Consensus 104 ~~~~d--~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~--y----d~~t~~W~~~~~~~~~p 175 (448)
-|.+- .....|+.-.. +.+|..-.-|+.|.+.+ .-|++|=..++-...++-. | +.....-.+.-++ ...
T Consensus 260 ~W~~~T~F~~spW~~t~L-~~i~~vTe~HSFa~i~~-~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~s-ey~ 336 (670)
T 3ju4_A 260 NWHMGTSFHKSPWRKTDL-GLIPSVTEVHSFATIDN-NGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPS-EYE 336 (670)
T ss_dssp EEEEEECSTTSCCEEEEC-CSCTTCSEEEEEEECSS-SCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCG-GGC
T ss_pred eeeeeeeeccCCceeccc-ccccceeeeeeeeEecC-CceEEEeccCCCCcceeeEEEecccccCCcceeeeechh-hhc
Confidence 45443 34667766442 34676677899999866 5668876555533333322 2 1111112221111 112
Q ss_pred CccCCceeEEeCCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEeCCEEEEEcCCCC
Q 013179 176 PPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGT 255 (448)
Q Consensus 176 ~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~~~~i~v~GG~~~ 255 (448)
..-...+.-.+++.||++--.......-.. +.+-+.....|+.+..+..... ...-.+..++.||+||-...
T Consensus 337 ~~AsEPCvkyYdgvLyLtTRgt~~~~~GS~------L~rs~d~Gq~w~slrfp~nvHh--tnlPFakvgD~l~mFgsERA 408 (670)
T 3ju4_A 337 PDASEPCIKYYDGVLYLITRGTRGDRLGSS------LHRSRDIGQTWESLRFPHNVHH--TTLPFAKVGDDLIMFGSERA 408 (670)
T ss_dssp TTEEEEEEEEETTEEEEEEEESCTTSCCCE------EEEESSTTSSCEEEECTTCCCS--SCCCEEEETTEEEEEEECSS
T ss_pred cccccchhhhhCCEEEEEecCcCCCCCcce------eeeecccCCchhheeccccccc--cCCCcceeCCEEEEEecccc
Confidence 222344555679999998733222222222 3333678899999974321111 11135678999999985322
Q ss_pred CCC------cccccceeCcEEE--EEc-----CCCceEEeccC---CCCCCCccceEEEE-ECCEEE-EEccCC
Q 013179 256 GGW------LSRYDIYYNDTII--LDR-----LSAQWKRLPIG---NEPPPARAYHSMTC-LGSLYL-LFGGFD 311 (448)
Q Consensus 256 ~~~------~~~~~~~~~~v~~--yd~-----~~~~W~~~~~~---~~~p~~r~~~~~~~-~~~~i~-v~GG~~ 311 (448)
.++ -.|+..-....+. .+. +.-+|..+... +.....-.+-..++ -++-|| +|||.+
T Consensus 409 ~nEWE~G~pD~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd 482 (670)
T 3ju4_A 409 ENEWEAGAPDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGED 482 (670)
T ss_dssp TTCSSTTCCCCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBC
T ss_pred ccccccCCCcccccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcc
Confidence 110 1223322333333 332 33457666442 11122223334444 456554 899976
No 279
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=40.83 E-value=3.2e+02 Score=28.05 Aligned_cols=89 Identities=11% Similarity=0.078 Sum_probs=47.2
Q ss_pred CCcEEEEECCCC--cE--EEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCC-CceEe-ecCCCCC
Q 013179 101 LGDFWVLDTDIW--QW--SELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS-LEWMQ-LPVTGSV 174 (448)
Q Consensus 101 ~~~~~~~d~~t~--~W--~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t-~~W~~-~~~~~~~ 174 (448)
.++++.+|+.+. .+ +.+.+. .... .++.....++.||+..-.++ .....++.+|+.+ ..|+. +-+ .
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~--~~~~--~~s~~~~~g~~l~~~t~~~~-a~~~~L~~~d~~~~~~~~~~li~--~- 365 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPR--EKGV--RYDVQMHGTSHLVILTNEGG-AVNHKLLIAPRGQPSDWSHVLVD--H- 365 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCC--CTTC--CEEEEEETTTEEEEEECTTT-CTTCEEEEEETTSTTCCCCEEEC--C-
T ss_pred CceEEEEECCCCCCCceeEEeecC--CCCc--eEEEeeeeCCEEEEEeCCCC-CCCcEEEEEcCCCcccceeeEEC--C-
Confidence 567999999875 46 655431 1111 12222123458888876541 1234689999876 68876 431 1
Q ss_pred CCccCCceeEEeCCEEEEEcccC
Q 013179 175 PPPRCGHTATMVEKRLLIYGGRG 197 (448)
Q Consensus 175 p~~r~~~~~~~~~~~lyv~GG~~ 197 (448)
.....-......++.|++..-..
T Consensus 366 ~~~~~l~~~~~~~~~lv~~~~~~ 388 (751)
T 2xe4_A 366 SEDVFMESIAVRSNYLVVAGRRA 388 (751)
T ss_dssp CSSEEEEEEEECSSEEEEEEEET
T ss_pred CCCcEEEEEEEECCEEEEEEEeC
Confidence 11111122333467777766443
No 280
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=39.47 E-value=1.3e+02 Score=28.94 Aligned_cols=18 Identities=17% Similarity=0.224 Sum_probs=14.9
Q ss_pred cccEEEEECCcEEEEEec
Q 013179 128 DFAAASAIGNRKIVMYGG 145 (448)
Q Consensus 128 ~~~~~~~~~~~~iyv~GG 145 (448)
..|+++...++.+|.+|-
T Consensus 266 ~~hs~alt~~G~v~~wG~ 283 (473)
T 3of7_A 266 ENHCFALTKDNKLVSWGL 283 (473)
T ss_dssp SSEEEEEETTSCEEEEEE
T ss_pred CCeEEEEecCCCEEEeCC
Confidence 568888888889999984
No 281
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=39.31 E-value=2.3e+02 Score=26.07 Aligned_cols=75 Identities=9% Similarity=-0.072 Sum_probs=44.0
Q ss_pred ECCeEEEEcccCC----CCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcE-EEEEecCCCCccCCceEEEe
Q 013179 85 IDCHMFIFGGRFG----SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLD 159 (448)
Q Consensus 85 ~~~~lyv~GG~~~----~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd 159 (448)
.++++|+...... +...++++++|+.+++-..- +|.+..-++++...+++ +++.+... .+++..||
T Consensus 277 d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~-----i~~g~~p~~i~~s~Dg~~~l~v~~~~----~~~V~ViD 347 (373)
T 2mad_H 277 SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQ-----ISLGHDVDAISVAQDGGPDLYALSAG----TEVLHIYD 347 (373)
T ss_pred CCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEE-----EECCCCcCeEEECCCCCeEEEEEcCC----CCeEEEEE
Confidence 3578999754211 12346799999998765332 23333345555555555 44444321 26799999
Q ss_pred CCCCceEee
Q 013179 160 TISLEWMQL 168 (448)
Q Consensus 160 ~~t~~W~~~ 168 (448)
..+.+-...
T Consensus 348 ~~t~~vv~~ 356 (373)
T 2mad_H 348 AGAGDQDQS 356 (373)
T ss_pred CCCCCEEee
Confidence 887765543
No 282
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=37.60 E-value=2.2e+02 Score=25.35 Aligned_cols=63 Identities=5% Similarity=-0.011 Sum_probs=34.3
Q ss_pred CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCC
Q 013179 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (448)
Q Consensus 86 ~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t 162 (448)
++.+++.|+.++ .+..+|+.+++....-. .. ...-.+++...++..++.||.++ .+..||+..
T Consensus 87 ~~~~l~s~s~D~-----~v~lwd~~~~~~~~~~~---~h-~~~v~~v~~sp~~~~l~s~~~d~-----~i~~wd~~~ 149 (343)
T 2xzm_R 87 ENCFAISSSWDK-----TLRLWDLRTGTTYKRFV---GH-QSEVYSVAFSPDNRQILSAGAER-----EIKLWNILG 149 (343)
T ss_dssp STTEEEEEETTS-----EEEEEETTSSCEEEEEE---CC-CSCEEEEEECSSTTEEEEEETTS-----CEEEEESSS
T ss_pred CCCEEEEEcCCC-----cEEEEECCCCcEEEEEc---CC-CCcEEEEEECCCCCEEEEEcCCC-----EEEEEeccC
Confidence 456666776543 48889998876433221 11 11122333334556667777543 367777763
No 283
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=37.26 E-value=2.1e+02 Score=25.00 Aligned_cols=100 Identities=10% Similarity=0.082 Sum_probs=50.9
Q ss_pred EEECCcEEEEEcCCCCCcccCceEEEEcCCCc--EEeeeecCCCCCCCCCCCCCcceeEEE-ECCeEEEEcccCCCCCCC
Q 013179 26 VNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKL--WFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLG 102 (448)
Q Consensus 26 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~p~~R~~h~~~~-~~~~lyv~GG~~~~~~~~ 102 (448)
+...++.||+. .. -..++.||+. ++ |.... +... ..+.+. .++.||+.. .
T Consensus 143 ~~~~~g~l~vg-t~-----~~~l~~~d~~-g~~~~~~~~-----------~~~~-~~~~~~d~~g~l~v~t--------~ 195 (330)
T 3hxj_A 143 IVSEDGTIYVG-SN-----DNYLYAINPD-GTEKWRFKT-----------NDAI-TSAASIGKDGTIYFGS--------D 195 (330)
T ss_dssp EECTTSCEEEE-CT-----TSEEEEECTT-SCEEEEEEC-----------SSCC-CSCCEECTTCCEEEES--------S
T ss_pred EEcCCCEEEEE-cC-----CCEEEEECCC-CCEeEEEec-----------CCCc-eeeeEEcCCCEEEEEe--------C
Confidence 33445666663 22 1358889988 43 54421 1111 223333 356777654 3
Q ss_pred cEEEEECCC-CcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCc
Q 013179 103 DFWVLDTDI-WQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (448)
Q Consensus 103 ~~~~~d~~t-~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (448)
.+++||... ..|+.... . ....+.+...++.||+..- -..+++||.....
T Consensus 196 ~l~~~d~~g~~~~~~~~~-----~-~~~~~~~~~~~g~l~v~t~------~~gl~~~~~~g~~ 246 (330)
T 3hxj_A 196 KVYAINPDGTEKWNFYAG-----Y-WTVTRPAISEDGTIYVTSL------DGHLYAINPDGTE 246 (330)
T ss_dssp SEEEECTTSCEEEEECCS-----S-CCCSCCEECTTSCEEEEET------TTEEEEECTTSCE
T ss_pred EEEEECCCCcEEEEEccC-----C-cceeceEECCCCeEEEEcC------CCeEEEECCCCCE
Confidence 589999442 24554321 1 1123334445567887532 1348888875444
No 284
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=37.07 E-value=3.2e+02 Score=26.96 Aligned_cols=112 Identities=9% Similarity=0.016 Sum_probs=58.4
Q ss_pred EEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCCC
Q 013179 33 VVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIW 112 (448)
Q Consensus 33 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~ 112 (448)
.++.|+.++ .+..||..+.+.... .. .........++.-++++++.|+.++ .+..+|..++
T Consensus 162 ~l~s~s~D~-----~v~lwd~~~~~~~~~--l~-------~H~~~V~~v~fspdg~~las~s~D~-----~i~lwd~~~g 222 (611)
T 1nr0_A 162 RIISGSDDN-----TVAIFEGPPFKFKST--FG-------EHTKFVHSVRYNPDGSLFASTGGDG-----TIVLYNGVDG 222 (611)
T ss_dssp EEEEEETTS-----CEEEEETTTBEEEEE--EC-------CCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTC
T ss_pred EEEEEeCCC-----eEEEEECCCCeEeee--ec-------cccCceEEEEECCCCCEEEEEECCC-----cEEEEECCCC
Confidence 566776543 377788776543221 11 1111112222223667778887654 4888898877
Q ss_pred cEEEeecCCCCC---CcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceEee
Q 013179 113 QWSELTSFGDLP---SPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQL 168 (448)
Q Consensus 113 ~W~~~~~~~~~p---~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~ 168 (448)
+-...-....+. ....-.+++...+++.++.|+.++ .+..+|+.+.+....
T Consensus 223 ~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~-----~v~lWd~~~~~~~~~ 276 (611)
T 1nr0_A 223 TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK-----TIKIWNVATLKVEKT 276 (611)
T ss_dssp CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEE
T ss_pred cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC-----eEEEEeCCCCceeee
Confidence 654332100000 011112233335667777777543 478899888776543
No 285
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=36.86 E-value=4.4e+02 Score=28.60 Aligned_cols=159 Identities=16% Similarity=0.116 Sum_probs=84.5
Q ss_pred CCcEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE---CCeEEEEcccCC
Q 013179 21 SGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI---DCHMFIFGGRFG 97 (448)
Q Consensus 21 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~---~~~lyv~GG~~~ 97 (448)
.|+++....++. ++|.-....-...++.|+.....|..-..... ........++++++. +...||+|--.
T Consensus 335 ~GfSa~~t~d~~--~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~----~~~~~sylGySVa~~~~~g~~~~v~GAP~- 407 (1095)
T 3k6s_A 335 EGFSAVFTPDGP--VLGAVGSFTWSGGAFLYPPNMSPTFINMSQEN----VDMRDSYLGYSTELALWKGVQSLVLGAPR- 407 (1095)
T ss_dssp TTSSEECCTTCC--EEEESCSTTTTBEEEECCSSSCCEEECCCSSC----CCCCSCCBTSSEECCCCSSSCEEEEEETT-
T ss_pred ccccceecCCcc--eEcccccCCccceeEEecCCCcceeecccccc----ccccccccceeeEEeccCCceEEEEEccc-
Confidence 455665555443 67754322233457788776655543221110 012223345666542 23456776322
Q ss_pred CCCCCcEEEEECCCCcEEEeec-CCCCCCcCcccEEEEE---CC--cEEEEEecCCC--CccCCceEEEeCCC--CceEe
Q 013179 98 SRRLGDFWVLDTDIWQWSELTS-FGDLPSPRDFAAASAI---GN--RKIVMYGGWDG--KKWLSDVYVLDTIS--LEWMQ 167 (448)
Q Consensus 98 ~~~~~~~~~~d~~t~~W~~~~~-~~~~p~~r~~~~~~~~---~~--~~iyv~GG~~~--~~~~~~v~~yd~~t--~~W~~ 167 (448)
......+++|......|..... .+.-....++++.++. +| ..++++|.-.. ......+|.|.... ..|..
T Consensus 408 ~~~~G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~ 487 (1095)
T 3k6s_A 408 YQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWC 487 (1095)
T ss_dssp GGGTCEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCS
T ss_pred ccccceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceee
Confidence 1224468999888888877653 3334455677777764 12 26777774221 12234688886543 45764
Q ss_pred ecC-CCC--CCCccCCceeEEe
Q 013179 168 LPV-TGS--VPPPRCGHTATMV 186 (448)
Q Consensus 168 ~~~-~~~--~p~~r~~~~~~~~ 186 (448)
... .+. .+..|++.+++..
T Consensus 488 ~~~l~g~~~~~~~~FG~sva~~ 509 (1095)
T 3k6s_A 488 DAVLYGEQGHPWGRFGAALTVL 509 (1095)
T ss_dssp CSSCCCCCSCSSCCBTSCEEEE
T ss_pred eEEeecccCCccccCccceEee
Confidence 321 122 1457888888764
No 286
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=34.27 E-value=2.3e+02 Score=24.45 Aligned_cols=60 Identities=12% Similarity=0.059 Sum_probs=34.6
Q ss_pred CceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEEECCCCcEEEe
Q 013179 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSEL 117 (448)
Q Consensus 46 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~ 117 (448)
+.+.++|+.+++-...-... .+.......+..-+++.++.|+.++ .+..+|..+++-...
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~-------~~~~~V~~v~~~~~~~~l~sgs~Dg-----~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQME-------QPGEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRN 104 (318)
T ss_dssp TEEEEEETTTCCEEEEEECC-------STTCCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEE
T ss_pred CEEEEEECCCCCEEEEEEec-------CCCCeEEEEEECCCCCEEEEEECCC-----cEEEeecCCceeEEE
Confidence 35899999998765432210 1111111222223567778887654 488899988875443
No 287
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=33.78 E-value=2.4e+02 Score=26.09 Aligned_cols=79 Identities=10% Similarity=-0.003 Sum_probs=46.5
Q ss_pred cEEEEE-CCcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE-CCeEEEEcccCCCCC
Q 013179 23 HSAVNI-GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRR 100 (448)
Q Consensus 23 ~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~-~~~lyv~GG~~~~~~ 100 (448)
.+++.. .++++|+|=| +.+|+||..+++-..- -+..-...-+..+..-.+++.. ++++|+|=|
T Consensus 276 DAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~g--yPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg------ 340 (365)
T 3ba0_A 276 DAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPG--YPKLITKNFQGIGPKIDAVFYSKNKYYYFFQG------ 340 (365)
T ss_dssp CEEEEETTTTEEEEEET-------TEEEEEETTTTEECSS--CCCCHHHHSTTCCSSCSEEEEETTTEEEEEET------
T ss_pred CEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCC--CCcchhhcCCCCCCccceeeEecCCcEEEEeC------
Confidence 344444 4589999987 4699999877642110 0000000001122234455555 789999976
Q ss_pred CCcEEEEECCCCcEEEe
Q 013179 101 LGDFWVLDTDIWQWSEL 117 (448)
Q Consensus 101 ~~~~~~~d~~t~~W~~~ 117 (448)
+..|+||..+.+-...
T Consensus 341 -~~ywr~d~~~~~v~~~ 356 (365)
T 3ba0_A 341 -SNQFEYDFLLQRITKT 356 (365)
T ss_dssp -TEEEEEETTTTEEEEE
T ss_pred -CEEEEEECCccEEecc
Confidence 3599999998876653
No 288
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=33.30 E-value=3.1e+02 Score=28.06 Aligned_cols=102 Identities=10% Similarity=0.026 Sum_probs=55.8
Q ss_pred CceEEEEcCC--CcEEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCC-----CCCCCcEEEEECCC-------
Q 013179 46 SDVVVYDIDN--KLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFG-----SRRLGDFWVLDTDI------- 111 (448)
Q Consensus 46 ~~~~~yd~~~--~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~-----~~~~~~~~~~d~~t------- 111 (448)
++++..|... ..|.++. .|+...-....++++|+....+- .-....+...|+.+
T Consensus 269 ~~~~~~~~~~~~~~~~~l~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 336 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKIN------------MPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESD 336 (711)
T ss_dssp EEEEEEECSSSSCEEEECC------------SCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGG
T ss_pred eeEEEEcCCCCCCcceEee------------cCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccc
Confidence 5566666553 5566652 22322223456889999764321 11345688888765
Q ss_pred -CcEEEeecCCCCCCcCcccEEEEECCcEEEEEecCCCCccCCceEEEeCCCCceE
Q 013179 112 -WQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (448)
Q Consensus 112 -~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (448)
..|+.+- .|.....-......++.+++..-.++ ...++++|+.+++|.
T Consensus 337 ~~~~~~~~----~~~~~~~l~~~~~~~~~l~~~~~~~~---~~~l~~~~~~~g~~~ 385 (711)
T 4hvt_A 337 KTSLKILF----TPTANEVFNFISTTKDRVFLATYDNV---VAKVVTFTLENEQWT 385 (711)
T ss_dssp CTTCEEEE----CCCTTEEEEEEEECSSCEEEEEEETT---EEEEEEECEETTEEC
T ss_pred cccceEEE----CCCCCCeEEEEEEECCEEEEEEEECC---EEEEEEEECCCCceE
Confidence 4688743 22222222223333336666543222 345888998888774
No 289
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=32.80 E-value=2.3e+02 Score=24.05 Aligned_cols=151 Identities=13% Similarity=0.169 Sum_probs=73.8
Q ss_pred CCCCCCC----cEEEEECCcEEEEEcCCCCCcccCceEEEEcCCC-cEEeeeecCCCCCCCCCCCCCcceeEEEE--CCe
Q 013179 16 VPQPRSG----HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNK-LWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCH 88 (448)
Q Consensus 16 ~P~~R~~----~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~ 88 (448)
.|..+.. -++..+ ++.+|+|=| +.+|+++.... .......... -+.+|. .. -|+... +++
T Consensus 23 ~p~~C~~~~~~DAi~~~-~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~---wp~lp~-~I-DAA~~~~~~~k 89 (218)
T 1gen_A 23 TPEICKQDIVFDGIAQI-RGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATF---WPELPE-KI-DAVYEAPQEEK 89 (218)
T ss_dssp CCCTTTSCCCCSEEEEE-TTEEEEEET-------TEEEEESSTTSCCEEEEEGGGT---CTTSCS-CC-SEEEEETTTTE
T ss_pred CcccCCCCCcEeEEEeC-CCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHh---cCCCCC-Cc-cEEEEECCCCE
Confidence 3555532 344444 478999887 24676665442 1222111100 011231 22 233333 679
Q ss_pred EEEEcccCCCCCCCcEEEEECCCCc---EEEeecCCCCCCcC-cccEEEEE-CCcEEEEEecCCCCccCCceEEEeCCCC
Q 013179 89 MFIFGGRFGSRRLGDFWVLDTDIWQ---WSELTSFGDLPSPR-DFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (448)
Q Consensus 89 lyv~GG~~~~~~~~~~~~~d~~t~~---W~~~~~~~~~p~~r-~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (448)
+|+|=| +.+|+||..+.. =+.+... .+|... .-.++... .++++|+|-| +..|+||..++
T Consensus 90 ~yfFkG-------~~yW~y~~~~~~~gyPk~I~~~-g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~ 154 (218)
T 1gen_A 90 AVFFAG-------NEYWIYSASTLERGYPKPLTSL-GLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKK 154 (218)
T ss_dssp EEEEET-------TEEEEEETTEECTTCSEEGGGG-TCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTT
T ss_pred EEEEeC-------CEEEEEcCccccCCCCccHhhc-CCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccc
Confidence 999977 358999853110 0111110 233321 12333332 5679999976 45789998765
Q ss_pred ceEee-----cC-CCCCCCccCCceeEEeC--CEEEEEccc
Q 013179 164 EWMQL-----PV-TGSVPPPRCGHTATMVE--KRLLIYGGR 196 (448)
Q Consensus 164 ~W~~~-----~~-~~~~p~~r~~~~~~~~~--~~lyv~GG~ 196 (448)
+-..- +. =..+| ..-.++...+ +.+|.|-|.
T Consensus 155 ~v~~gyPr~i~~~w~g~p--~~idaAf~~~~~g~~YfFkg~ 193 (218)
T 1gen_A 155 KMDPGFPKLIADAWNAIP--DNLDAVVDLQGGGHSYFFKGA 193 (218)
T ss_dssp EECSSCCEEHHHHSSSCC--SSCSEEEECTTTCEEEEEETT
T ss_pred cccCCCCcchhhccCCCC--CCCCEEEEEcCCCcEEEEECC
Confidence 43211 00 00122 2223444444 799998774
No 290
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=31.20 E-value=57 Score=30.25 Aligned_cols=70 Identities=11% Similarity=0.109 Sum_probs=31.4
Q ss_pred cEEEEECCcEEEEEcCCCCCcccCceEEEEcCCCc--EEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCC
Q 013179 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKL--WFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRR 100 (448)
Q Consensus 23 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~ 100 (448)
++..++.++.||+.+. + ..++.+|..+++ |+.-. . ....+.+..++.+|+.++.++
T Consensus 2 ~ssP~v~~~~v~~gs~-d-----g~v~a~d~~tG~~~W~~~~--~-----------~~~s~p~~~~g~~~v~~s~dg--- 59 (369)
T 2hz6_A 2 SSTVTLPETLLFVSTL-D-----GSLHAVSKRTGSIKWTLKE--D-----------PVLQVPTHVEEPAFLPDPNDG--- 59 (369)
T ss_dssp ------CTTEEEEEET-T-----SEEEEEETTTCCEEEEEEC--C-----------CSCCCC-----CCEEECTTTC---
T ss_pred CCCCeeeCCEEEEEcC-C-----CEEEEEECCCCCEEEEecC--C-----------CceecceEcCCCEEEEeCCCC---
Confidence 4445555576766443 2 359999998874 76532 1 011222345667888765332
Q ss_pred CCcEEEEECCCC--cEEE
Q 013179 101 LGDFWVLDTDIW--QWSE 116 (448)
Q Consensus 101 ~~~~~~~d~~t~--~W~~ 116 (448)
.++.+|..++ .|+.
T Consensus 60 --~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 60 --SLYTLGSKNNEGLTKL 75 (369)
T ss_dssp --CEEEC-----CCSEEC
T ss_pred --EEEEEECCCCceeeee
Confidence 4899998765 4543
No 291
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=30.84 E-value=3.2e+02 Score=25.20 Aligned_cols=18 Identities=17% Similarity=0.250 Sum_probs=14.7
Q ss_pred CCcEEEEECCcEEEEEcC
Q 013179 21 SGHSAVNIGKSKVVVFGG 38 (448)
Q Consensus 21 ~~~~~~~~~~~~iyv~GG 38 (448)
..|++++..++.||.+|-
T Consensus 116 ~~h~~al~~~G~v~~wG~ 133 (389)
T 3kci_A 116 GKHCLALSSEGEVYSWGE 133 (389)
T ss_dssp CSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEcCCCCEEEEeC
Confidence 357888888899999995
No 292
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=29.29 E-value=2.7e+02 Score=23.72 Aligned_cols=181 Identities=10% Similarity=-0.078 Sum_probs=92.1
Q ss_pred eeEEEE--CCeEEEEcccCCCCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEE-CCcEEEEEecCCCCccCCceE
Q 013179 80 HIAVAI--DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVY 156 (448)
Q Consensus 80 h~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~ 156 (448)
+..+.. +++||+.-.. .+.++++|+.+..-..+... .+ ..-+.+++. .++.||+.-.. .+.++
T Consensus 39 ~gi~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~-~~---~~p~~ia~d~~~~~lyv~d~~-----~~~I~ 104 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQ-DL---GSPEGIALDHLGRTIFWTDSQ-----LDRIE 104 (267)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEEESSSCCCEEEECT-TC---CCEEEEEEETTTTEEEEEETT-----TTEEE
T ss_pred EEEEEecCCCEEEEEECC-----CCEEEEEecCCCCcEEEEEC-CC---CCccEEEEEecCCeEEEEECC-----CCEEE
Confidence 444443 5689887532 24699999987654433311 11 122344444 34689987532 34688
Q ss_pred EEeCCCCceEeecCCCCCCCccCCceeEEe--CCEEEEEcccCCCCCccCceeeecccccccCCCCceEEecCCCCCCCC
Q 013179 157 VLDTISLEWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSS 234 (448)
Q Consensus 157 ~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~ 234 (448)
+++++...-+.+... .+..| ..+++. +++||+....... ..+.+++++...-+.+... . .
T Consensus 105 ~~~~~g~~~~~~~~~-~~~~P---~~i~vd~~~g~lyv~~~~~~~----------~~I~~~~~dg~~~~~~~~~-~---~ 166 (267)
T 1npe_A 105 VAKMDGTQRRVLFDT-GLVNP---RGIVTDPVRGNLYWTDWNRDN----------PKIETSHMDGTNRRILAQD-N---L 166 (267)
T ss_dssp EEETTSCSCEEEECS-SCSSE---EEEEEETTTTEEEEEECCSSS----------CEEEEEETTSCCCEEEECT-T---C
T ss_pred EEEcCCCCEEEEEEC-CCCCc---cEEEEeeCCCEEEEEECCCCC----------cEEEEEecCCCCcEEEEEC-C---C
Confidence 999875443333211 11122 233343 5789987532111 1233345544333333211 1 1
Q ss_pred CceeEEEEe--CCEEEEEcCCCCCCCcccccceeCcEEEEEcCCCceEEeccCCCCCCCccceEEEEECCEEEEEcc
Q 013179 235 RCGHTITSG--GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGG 309 (448)
Q Consensus 235 r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~GG 309 (448)
..-..+++. ++.||+.--. .+.++++|+....-..+... . ..-.+++..++.+|+.-.
T Consensus 167 ~~P~gia~d~~~~~lyv~d~~------------~~~I~~~~~~g~~~~~~~~~--~---~~P~gi~~d~~~lyva~~ 226 (267)
T 1npe_A 167 GLPNGLTFDAFSSQLCWVDAG------------THRAECLNPAQPGRRKVLEG--L---QYPFAVTSYGKNLYYTDW 226 (267)
T ss_dssp SCEEEEEEETTTTEEEEEETT------------TTEEEEEETTEEEEEEEEEC--C---CSEEEEEEETTEEEEEET
T ss_pred CCCcEEEEcCCCCEEEEEECC------------CCEEEEEecCCCceEEEecC--C---CCceEEEEeCCEEEEEEC
Confidence 222344553 5789987532 25699999876433333221 1 112345556888998653
No 293
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=27.22 E-value=5.3e+02 Score=26.49 Aligned_cols=237 Identities=11% Similarity=0.122 Sum_probs=115.9
Q ss_pred cceEEeeeCCCCCCCCCCCCCcEEEEE---C-CcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCC---
Q 013179 2 HYWVRASSSDFGGTVPQPRSGHSAVNI---G-KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGP--- 74 (448)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~~~~~~~---~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p--- 74 (448)
++|+.+.- .+.|+...+. . .+.+|+-+-. .-+++-+-.-.+|+.+..... ...++
T Consensus 10 ~~~~~~~~---------g~~g~i~~i~~~p~~~~~~y~~~~~------ggv~~S~DgG~tW~~~~~~~~---~~~~~~~~ 71 (763)
T 3a0f_A 10 AELKPVTI---------SGGGFISGLVAHPTEKDLIYARTDI------GGTYRWNAAKWEWEPITDFII---NNALAGNG 71 (763)
T ss_dssp CEEEECSC---------CBCSCEEEEEECSSSTTCEEEEESS------SCEEEEETTTTEEEESCTTCB---TTCSSSCC
T ss_pred EEEEeeEe---------cCCCceeEEEeCCCCCCEEEEEecc------CcEEEECCCCCCeeECccCcc---ccccCCCc
Confidence 56776642 2555544432 2 2456655421 237777777789998863100 00001
Q ss_pred -CCCcceeEEEE---CCeEEEEcccCC-CCCCCcEEEEECCCCcEEEeecCCCCC---CcCc-ccEEEEE--CCcEEEEE
Q 013179 75 -GPRAFHIAVAI---DCHMFIFGGRFG-SRRLGDFWVLDTDIWQWSELTSFGDLP---SPRD-FAAASAI--GNRKIVMY 143 (448)
Q Consensus 75 -~~R~~h~~~~~---~~~lyv~GG~~~-~~~~~~~~~~d~~t~~W~~~~~~~~~p---~~r~-~~~~~~~--~~~~iyv~ 143 (448)
.....+++++. .+.+|+..|... ......+++=+-.-.+|+++......+ ..|. .+.+++. ..+.+|+.
T Consensus 72 ~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~ 151 (763)
T 3a0f_A 72 ANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFG 151 (763)
T ss_dssp CCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEE
T ss_pred ccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEE
Confidence 11222333332 357888655311 111233454444556899987311111 1232 1234443 23577775
Q ss_pred ecCCCCccCCceEEEeCCCCceEeecCCCCCCCcc---CCceeEEe----CCEEEEEcccCCCCCccCceeeeccccccc
Q 013179 144 GGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPR---CGHTATMV----EKRLLIYGGRGGGGPIMGDLWALKGLIEEE 216 (448)
Q Consensus 144 GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r---~~~~~~~~----~~~lyv~GG~~~~~~~~~d~~~~~~~~~yd 216 (448)
+. ...+++=+=.-.+|+++. .++... .+...+.+ .+.+|+.....+ .++.. +
T Consensus 152 ~~------~~~l~~S~DgG~TW~~~~---~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g------~v~~S------~ 210 (763)
T 3a0f_A 152 SR------TQGLWRSTDRAQTWSRMN---QLPDSSTYGIGIISVIFDPKNVGTAYVASHAVG------GLWVT------W 210 (763)
T ss_dssp CS------SSCEEEESSTTSSCEECT---TSCCCSCTTTCEEEEEECSSSTTCEEEEESSTT------CEEEE------S
T ss_pred eC------CCcEEEECCCCcCccccc---cCcccCCCccceEEEEECCCCCCEEEEEEeCCC------eEEEE------C
Confidence 41 134554433457899987 344322 22222222 346777643221 13332 3
Q ss_pred CCCCceEEecCCCCCC--------------------CCCceeEEEEe-CCEEEEEcCCCCCCCcccccceeCcEEEEEcC
Q 013179 217 NETPGWTQLKLPGQAP--------------------SSRCGHTITSG-GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRL 275 (448)
Q Consensus 217 ~~~~~W~~~~~~g~~p--------------------~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~ 275 (448)
-...+|+.+.. .| .++..+.+++. ++.+|+........ +......+|+.+-.
T Consensus 211 DgG~tW~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~----~~~~~g~v~rS~D~ 283 (763)
T 3a0f_A 211 DGGANWSQVGG---QPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYITYSDAPGP----WGVLYGEVWSYDPT 283 (763)
T ss_dssp SSSSSCEECTT---CCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEEEESSCSS----SCCCCEEEEEEETT
T ss_pred CCCCCccccCC---CccccccccccccccccccccCCCCcceeEEECCCCcEEEEeccCCCC----CCCcceeEEEEeCC
Confidence 35678998862 22 23444555443 57788874221100 00112469999989
Q ss_pred CCceEEecc
Q 013179 276 SAQWKRLPI 284 (448)
Q Consensus 276 ~~~W~~~~~ 284 (448)
..+|+++.+
T Consensus 284 G~tW~~~~~ 292 (763)
T 3a0f_A 284 NGNWKHITP 292 (763)
T ss_dssp TTEEEECCT
T ss_pred CCceEECCC
Confidence 999999875
No 294
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=25.59 E-value=5.1e+02 Score=25.82 Aligned_cols=66 Identities=11% Similarity=0.063 Sum_probs=32.2
Q ss_pred cEEEEECCCCcE---EEeecCCCCC-CcCcccEEEEECCcEEEEEecCCCCccCCceEEEe----CCCCceEeec
Q 013179 103 DFWVLDTDIWQW---SELTSFGDLP-SPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLD----TISLEWMQLP 169 (448)
Q Consensus 103 ~~~~~d~~t~~W---~~~~~~~~~p-~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd----~~t~~W~~~~ 169 (448)
.++.+|+.+++- .++.....+. ........+...|+++++.... .......++.+| +.+.++..+.
T Consensus 225 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~-~~~~~~~l~~~d~~~~~~~g~~~~~~ 298 (719)
T 1z68_A 225 RIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLK-RVQNVSVLSICDFREDWQTWDCPKTQ 298 (719)
T ss_dssp EEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEE-SSTTEEEEEEEEECSSSSSEECCGGG
T ss_pred EEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEec-cccCeEEEEEEcccCCCCCCceEEEE
Confidence 688899988752 3332100000 0111122222355676655321 112234689999 8777766553
No 295
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=25.19 E-value=4.3e+02 Score=24.79 Aligned_cols=110 Identities=14% Similarity=0.131 Sum_probs=60.6
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEECC-eEEEEcccCCCCCCCcEEEEE
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDC-HMFIFGGRFGSRRLGDFWVLD 108 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~-~lyv~GG~~~~~~~~~~~~~d 108 (448)
++.||+.--. ..+.+||+..+..+.+.. ...+-.+-++.-++ .||+.....+ .....+..++
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~----------~~~~P~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~ 211 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYS----------GLSKVRTICWTHEADSMIITNDQNN-NDRPNNYILT 211 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEEC----------CCSCEEEEEECTTSSEEEEEECCSC-TTSEEEEEEE
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEec----------CCCCcceEEEeCCCCEEEEEeCCCC-cccceEEEEe
Confidence 4778886431 679999999988777642 11222333333344 4888864332 2222456666
Q ss_pred CCCCcEE---EeecCCCCCCcCcccEEEEEC-CcEEEEEecCCCCccCCceEEEeCCCCceEee
Q 013179 109 TDIWQWS---ELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQL 168 (448)
Q Consensus 109 ~~t~~W~---~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~ 168 (448)
... .+. .+. ....-+.+++.. ++.||+.--. ...+++||+.+..-..+
T Consensus 212 ~~g-~~~~~~~l~------~~~~p~giavdp~~g~lyv~d~~-----~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 212 RES-GFKVITELT------KGQNCNGAETHPINGELYFNSWN-----AGQVFRYDFTTQETTPL 263 (430)
T ss_dssp GGG-TSCSEEEEE------ECSSCCCEEECTTTCCEEEEETT-----TTEEEEEETTTTEEEEE
T ss_pred CCC-ceeeeeeec------cCCCceEEEEeCCCCEEEEEECC-----CCEEEEEECCCCcEEEE
Confidence 543 232 222 112224455544 6788886421 24699999987765333
No 296
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=24.75 E-value=4e+02 Score=24.31 Aligned_cols=24 Identities=13% Similarity=0.259 Sum_probs=16.0
Q ss_pred CCcEEEEEcCCCCCcccCceEEEEcCCCc
Q 013179 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKL 57 (448)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 57 (448)
.++.+++.|+.++ .+.+||..+..
T Consensus 38 ~~g~~la~g~~dg-----~v~iw~~~~~~ 61 (447)
T 3dw8_B 38 HSGELLATGDKGG-----RVVIFQQEQEN 61 (447)
T ss_dssp SSSSEEEEEETTS-----EEEEEEECC--
T ss_pred CCCCEEEEEcCCC-----eEEEEEecCCC
Confidence 5577888888653 47788877654
No 297
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=24.49 E-value=3.4e+02 Score=24.55 Aligned_cols=65 Identities=22% Similarity=0.310 Sum_probs=40.1
Q ss_pred CCeEEEEcccCC-----CCCCCcEEEEECCCCcEEEeecCCCCCCcCcccEEEEECCc-EEEEEecCCCCccCCceEEEe
Q 013179 86 DCHMFIFGGRFG-----SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLD 159 (448)
Q Consensus 86 ~~~lyv~GG~~~-----~~~~~~~~~~d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd 159 (448)
++++|+....++ ....+.++++|+.+.+=... ++.+. -++++...++ .+|+.++ +.+..||
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~-----i~~~~-p~~ia~spdg~~l~v~n~-------~~v~v~D 331 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVAR-----IPGRD-ALSMTIDQQRNLMLTLDG-------GNVNVYD 331 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEE-----EECTT-CCEEEEETTTTEEEEECS-------SCEEEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEE-----EecCC-eeEEEECCCCCEEEEeCC-------CeEEEEE
Confidence 478999854221 11245799999999864332 33333 4555555443 6665431 6799999
Q ss_pred CCCC
Q 013179 160 TISL 163 (448)
Q Consensus 160 ~~t~ 163 (448)
..+.
T Consensus 332 ~~t~ 335 (361)
T 2oiz_A 332 ISQP 335 (361)
T ss_dssp CSSS
T ss_pred CCCC
Confidence 8887
No 298
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=23.65 E-value=5.7e+02 Score=25.67 Aligned_cols=75 Identities=16% Similarity=0.071 Sum_probs=43.1
Q ss_pred CcEEEEEcCCCCCcccCceEEEEcCCCc--EEeeeecCCCCCCCCCCCCCcceeEEEECCeEEEEcccCCCCCCCcEEEE
Q 013179 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKL--WFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVL 107 (448)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~p~~R~~h~~~~~~~~lyv~GG~~~~~~~~~~~~~ 107 (448)
+++||+... -..++.+|..+++ |+.-... .........+.++.++.+|+-.+.........++.|
T Consensus 117 ~~~v~v~~~------dg~l~alD~~tG~~~W~~~~~~-------~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~ 183 (668)
T 1kv9_A 117 GDKVYVGTL------DGRLIALDAKTGKAIWSQQTTD-------PAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAY 183 (668)
T ss_dssp BTEEEEECT------TSEEEEEETTTCCEEEEEECSC-------TTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEE
T ss_pred CCEEEEEcC------CCEEEEEECCCCCEeeeeccCC-------CCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEE
Confidence 367776432 1459999999885 8764311 001112223445668888775332111223469999
Q ss_pred ECCCCc--EEEe
Q 013179 108 DTDIWQ--WSEL 117 (448)
Q Consensus 108 d~~t~~--W~~~ 117 (448)
|+.|++ |+.-
T Consensus 184 D~~tG~~~W~~~ 195 (668)
T 1kv9_A 184 DADTGKLAWRFY 195 (668)
T ss_dssp ETTTCCEEEEEE
T ss_pred ECCCCcEEEEec
Confidence 999876 8764
No 299
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=21.44 E-value=4.2e+02 Score=23.38 Aligned_cols=205 Identities=12% Similarity=0.015 Sum_probs=105.9
Q ss_pred CceEEEEcCCCcEEeeeecCCCCCCCCCCCCCcceeEEEE--CCeEEEEcccCCCCCCCcEEEEECCC----CcEEEeec
Q 013179 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLDTDI----WQWSELTS 119 (448)
Q Consensus 46 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~p~~R~~h~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~t----~~W~~~~~ 119 (448)
+++..+|+.+.....+. +....-++.+.. +++||+.--. ...++++++.+ ..-..+..
T Consensus 10 ~~I~~i~~~~~~~~~~~-----------~~~~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~ 73 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLI-----------PNLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVIS 73 (316)
T ss_dssp SSEEEEETTSCCCEEEE-----------CSCSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEEC
T ss_pred CeEEEEECCCcceEehh-----------cCCCceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEe
Confidence 45888999887765543 122233455444 5689988542 34689999876 22222221
Q ss_pred CCCCCCcCcccEEEEE-CCcEEEEEecCCCCccCCceEEEeCCCCceEeecCCCCCCCccCCceeEEe--CCEEEEEccc
Q 013179 120 FGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGR 196 (448)
Q Consensus 120 ~~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~ 196 (448)
..+..+ ...++. .++.||+.-.. .+.+.++|++...-+.+.. ..+..|+ .+++. ++.||+..-.
T Consensus 74 -~~~~~p---~glavd~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~-~~~~~P~---~iavdp~~g~ly~~d~~ 140 (316)
T 1ijq_A 74 -RDIQAP---DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFR-ENGSKPR---AIVVDPVHGFMYWTDWG 140 (316)
T ss_dssp -SSCSCC---CEEEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEE-CTTCCEE---EEEEETTTTEEEEEECS
T ss_pred -CCCCCc---CEEEEeecCCeEEEEECC-----CCEEEEEeCCCCceEEEEE-CCCCCcc---eEEeCCCCCEEEEEccC
Confidence 112122 344443 35689987432 3468889987654333321 1222332 33343 6788887521
Q ss_pred CCCCCccCceeeecccccccCCCCceEEecCCCCCCCCCceeEEEEe--CCEEEEEcCCCCCCCcccccceeCcEEEEEc
Q 013179 197 GGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG--GHYLLLFGGHGTGGWLSRYDIYYNDTIILDR 274 (448)
Q Consensus 197 ~~~~~~~~d~~~~~~~~~yd~~~~~W~~~~~~g~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~ 274 (448)
. . ..+++++++...-+.+... . -..-.++++. +++||+.-.. .+.|+++|+
T Consensus 141 ~-----~------~~I~~~~~dG~~~~~~~~~-~---~~~P~gla~d~~~~~lY~~D~~------------~~~I~~~d~ 193 (316)
T 1ijq_A 141 T-----P------AKIKKGGLNGVDIYSLVTE-N---IQWPNGITLDLLSGRLYWVDSK------------LHSISSIDV 193 (316)
T ss_dssp S-----S------CEEEEEETTSCCEEEEECS-S---CSCEEEEEEETTTTEEEEEETT------------TTEEEEEET
T ss_pred C-----C------CeEEEEcCCCCCeEEEEEC-C---CCCceEEEEeccCCEEEEEECC------------CCeEEEEec
Confidence 1 0 2234446655443333211 1 1122345553 6799987532 257999998
Q ss_pred CCCceEEeccCCCCCCCccceEEEEECCEEEEEc
Q 013179 275 LSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFG 308 (448)
Q Consensus 275 ~~~~W~~~~~~~~~p~~r~~~~~~~~~~~i~v~G 308 (448)
+...-+.+.... .....-.++++.++.+|+.-
T Consensus 194 dg~~~~~~~~~~--~~~~~P~giav~~~~ly~~d 225 (316)
T 1ijq_A 194 NGGNRKTILEDE--KRLAHPFSLAVFEDKVFWTD 225 (316)
T ss_dssp TSCSCEEEEECT--TTTSSEEEEEEETTEEEEEE
T ss_pred CCCceEEEeecC--CccCCcEEEEEECCEEEEEE
Confidence 765444443211 11223356666788898865
Done!