Query 013183
Match_columns 448
No_of_seqs 395 out of 2835
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 01:14:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013183.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013183hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 2.9E-86 6.4E-91 655.9 33.0 329 80-426 2-349 (371)
2 PRK14296 chaperone protein Dna 100.0 5.1E-78 1.1E-82 612.7 34.5 334 81-425 3-359 (372)
3 PRK14288 chaperone protein Dna 100.0 1.5E-76 3.2E-81 601.8 33.4 325 81-425 2-343 (369)
4 PRK14279 chaperone protein Dna 100.0 5.1E-76 1.1E-80 601.9 34.5 334 81-416 8-362 (392)
5 PRK14286 chaperone protein Dna 100.0 1.9E-75 4.2E-80 594.2 34.2 332 81-425 3-355 (372)
6 PRK14284 chaperone protein Dna 100.0 2E-74 4.4E-79 590.7 34.5 341 82-425 1-364 (391)
7 PRK14277 chaperone protein Dna 100.0 2.9E-74 6.3E-79 588.6 35.0 339 81-425 4-363 (386)
8 PRK14298 chaperone protein Dna 100.0 1.8E-74 3.8E-79 587.7 33.1 327 81-425 4-349 (377)
9 PRK14285 chaperone protein Dna 100.0 3.7E-74 8E-79 583.5 34.1 323 82-416 3-337 (365)
10 PRK14295 chaperone protein Dna 100.0 7.1E-74 1.5E-78 585.5 35.7 343 80-426 7-371 (389)
11 PRK14282 chaperone protein Dna 100.0 1.2E-73 2.6E-78 581.2 34.9 326 81-416 3-347 (369)
12 PRK14301 chaperone protein Dna 100.0 8.8E-74 1.9E-78 582.2 33.5 329 81-425 3-348 (373)
13 PTZ00037 DnaJ_C chaperone prot 100.0 5.2E-74 1.1E-78 588.8 32.1 318 76-424 22-363 (421)
14 PRK14278 chaperone protein Dna 100.0 1.5E-73 3.3E-78 581.5 34.8 324 82-425 3-348 (378)
15 PRK14287 chaperone protein Dna 100.0 1.4E-73 3.1E-78 580.3 34.2 323 81-424 3-345 (371)
16 PRK14280 chaperone protein Dna 100.0 1.8E-73 3.9E-78 580.9 34.7 329 81-425 3-351 (376)
17 PRK14276 chaperone protein Dna 100.0 1.5E-73 3.3E-78 582.2 34.0 322 81-416 3-340 (380)
18 PRK14294 chaperone protein Dna 100.0 1.9E-73 4.2E-78 579.1 34.0 319 81-416 3-334 (366)
19 PRK14297 chaperone protein Dna 100.0 2.4E-73 5.2E-78 581.1 34.0 323 81-416 3-342 (380)
20 PRK10767 chaperone protein Dna 100.0 5.8E-73 1.2E-77 577.3 34.6 320 81-416 3-332 (371)
21 PRK14281 chaperone protein Dna 100.0 9E-73 1.9E-77 579.2 33.6 339 82-425 3-370 (397)
22 PRK14291 chaperone protein Dna 100.0 2.7E-72 5.8E-77 573.4 33.3 333 81-417 2-347 (382)
23 PRK14300 chaperone protein Dna 100.0 2E-71 4.4E-76 565.1 34.0 332 82-426 3-351 (372)
24 TIGR02349 DnaJ_bact chaperone 100.0 3.1E-71 6.7E-76 561.8 33.4 320 83-416 1-337 (354)
25 PRK14283 chaperone protein Dna 100.0 7.5E-71 1.6E-75 562.4 34.6 333 81-424 4-353 (378)
26 PRK14290 chaperone protein Dna 100.0 4.9E-70 1.1E-74 554.0 33.5 327 82-416 3-340 (365)
27 PRK14289 chaperone protein Dna 100.0 1.7E-69 3.7E-74 554.2 33.9 342 81-426 4-363 (386)
28 PRK14293 chaperone protein Dna 100.0 2.5E-69 5.5E-74 550.4 32.6 325 82-416 3-338 (374)
29 PRK14292 chaperone protein Dna 100.0 1.2E-67 2.5E-72 538.3 32.7 331 82-425 2-346 (371)
30 KOG0712 Molecular chaperone (D 100.0 2.8E-65 6.2E-70 499.7 24.6 308 81-416 3-324 (337)
31 PRK14299 chaperone protein Dna 100.0 7E-56 1.5E-60 437.3 28.5 271 81-428 3-287 (291)
32 PRK10266 curved DNA-binding pr 100.0 6.4E-54 1.4E-58 426.4 30.2 268 81-416 3-277 (306)
33 KOG0713 Molecular chaperone (D 100.0 1.9E-42 4.2E-47 334.8 10.4 309 79-416 13-323 (336)
34 TIGR03835 termin_org_DnaJ term 100.0 8.2E-40 1.8E-44 343.2 26.2 121 290-414 693-813 (871)
35 KOG0715 Molecular chaperone (D 100.0 1.3E-39 2.9E-44 319.0 15.1 240 82-357 43-288 (288)
36 KOG0714 Molecular chaperone (D 99.9 3.3E-22 7.1E-27 196.6 15.9 264 81-396 2-305 (306)
37 KOG0716 Molecular chaperone (D 99.8 1.3E-19 2.8E-24 170.9 5.2 72 81-152 30-101 (279)
38 COG2214 CbpA DnaJ-class molecu 99.7 1.8E-17 3.9E-22 155.8 14.2 68 80-147 4-72 (237)
39 PF01556 CTDII: DnaJ C termina 99.7 4.7E-18 1E-22 136.2 7.6 71 346-416 1-72 (81)
40 KOG0691 Molecular chaperone (D 99.7 2.8E-18 6.1E-23 167.4 6.8 73 81-153 4-76 (296)
41 PF00226 DnaJ: DnaJ domain; I 99.7 6E-18 1.3E-22 129.3 6.2 63 83-145 1-64 (64)
42 KOG0718 Molecular chaperone (D 99.7 6.3E-18 1.4E-22 169.2 6.1 75 80-154 7-84 (546)
43 KOG0717 Molecular chaperone (D 99.7 5E-18 1.1E-22 169.9 5.3 73 79-151 5-78 (508)
44 PTZ00341 Ring-infected erythro 99.7 3.8E-17 8.1E-22 176.7 8.1 74 79-153 570-643 (1136)
45 KOG0719 Molecular chaperone (D 99.6 1.6E-16 3.5E-21 146.5 6.2 69 80-148 12-82 (264)
46 smart00271 DnaJ DnaJ molecular 99.6 4.5E-16 9.9E-21 117.1 6.2 59 82-140 1-60 (60)
47 COG0484 DnaJ DnaJ-class molecu 99.6 3.4E-15 7.5E-20 149.2 11.9 134 207-344 135-340 (371)
48 PHA03102 Small T antigen; Revi 99.6 8.3E-16 1.8E-20 136.4 6.0 66 82-151 5-72 (153)
49 cd06257 DnaJ DnaJ domain or J- 99.6 1.7E-15 3.8E-20 111.8 6.4 55 83-137 1-55 (55)
50 KOG0624 dsRNA-activated protei 99.6 2.6E-15 5.7E-20 146.1 7.5 69 79-147 391-462 (504)
51 KOG0721 Molecular chaperone (D 99.6 3.5E-15 7.5E-20 136.7 6.6 71 79-149 96-166 (230)
52 PRK05014 hscB co-chaperone Hsc 99.5 6.5E-14 1.4E-18 127.7 7.0 66 82-147 1-73 (171)
53 PRK01356 hscB co-chaperone Hsc 99.5 1.1E-13 2.3E-18 125.6 6.7 67 82-148 2-73 (166)
54 PRK03578 hscB co-chaperone Hsc 99.4 1.5E-13 3.4E-18 125.6 7.3 67 81-147 5-78 (176)
55 PRK14282 chaperone protein Dna 99.4 2.7E-13 5.8E-18 138.6 9.8 140 207-350 145-359 (369)
56 PRK00294 hscB co-chaperone Hsc 99.4 1.9E-13 4.2E-18 124.5 7.6 69 80-148 2-77 (173)
57 PRK14290 chaperone protein Dna 99.4 5.7E-13 1.2E-17 136.0 9.4 119 228-350 164-352 (365)
58 PRK14298 chaperone protein Dna 99.4 8.4E-13 1.8E-17 135.2 8.4 118 229-350 158-347 (377)
59 PRK14294 chaperone protein Dna 99.4 1.3E-12 2.8E-17 133.5 9.1 118 229-350 161-346 (366)
60 KOG0550 Molecular chaperone (D 99.4 4E-13 8.6E-18 133.8 5.1 69 79-147 370-439 (486)
61 KOG0720 Molecular chaperone (D 99.4 4.8E-13 1E-17 134.6 5.4 68 81-149 234-301 (490)
62 PRK14285 chaperone protein Dna 99.4 1.6E-12 3.4E-17 132.7 9.1 138 207-348 139-347 (365)
63 PRK10767 chaperone protein Dna 99.3 2.2E-12 4.8E-17 132.1 9.1 141 207-351 135-345 (371)
64 KOG0722 Molecular chaperone (D 99.3 3.6E-13 7.8E-18 125.8 2.9 67 81-148 32-98 (329)
65 PTZ00100 DnaJ chaperone protei 99.3 1.8E-12 3.9E-17 109.4 5.6 54 79-136 62-115 (116)
66 PRK14301 chaperone protein Dna 99.3 3.7E-12 8E-17 130.3 8.8 137 207-347 137-343 (373)
67 TIGR02349 DnaJ_bact chaperone 99.3 8.7E-12 1.9E-16 127.0 8.5 136 208-347 137-346 (354)
68 PRK14287 chaperone protein Dna 99.3 7.7E-12 1.7E-16 127.9 7.9 116 229-348 155-342 (371)
69 PRK14300 chaperone protein Dna 99.3 1.4E-11 3.1E-16 126.0 9.8 112 229-344 162-342 (372)
70 PRK14284 chaperone protein Dna 99.3 6.9E-12 1.5E-16 129.2 7.2 115 229-347 175-359 (391)
71 PRK14288 chaperone protein Dna 99.3 1.6E-11 3.4E-16 125.5 9.6 114 228-345 155-336 (369)
72 PRK14278 chaperone protein Dna 99.2 3.6E-11 7.7E-16 123.3 11.2 130 207-340 132-336 (378)
73 PRK09430 djlA Dna-J like membr 99.2 1.1E-11 2.3E-16 121.1 6.5 59 79-137 197-262 (267)
74 PRK14286 chaperone protein Dna 99.2 2.3E-11 5E-16 124.4 8.9 135 207-345 143-348 (372)
75 PRK14279 chaperone protein Dna 99.2 5.2E-11 1.1E-15 122.6 11.2 130 207-341 166-365 (392)
76 PRK14281 chaperone protein Dna 99.2 4.9E-11 1.1E-15 123.0 10.9 109 228-340 178-358 (397)
77 PRK14280 chaperone protein Dna 99.2 2.9E-11 6.2E-16 124.0 8.8 130 208-341 137-340 (376)
78 PRK14276 chaperone protein Dna 99.2 3.3E-11 7.3E-16 123.6 9.1 109 229-341 163-343 (380)
79 PRK14293 chaperone protein Dna 99.2 3.3E-11 7.2E-16 123.5 8.8 118 229-350 160-350 (374)
80 PRK14292 chaperone protein Dna 99.2 4E-11 8.7E-16 122.8 8.5 116 228-347 156-341 (371)
81 PRK14289 chaperone protein Dna 99.2 6E-11 1.3E-15 122.1 9.8 127 207-337 147-347 (386)
82 PRK14297 chaperone protein Dna 99.2 9.7E-11 2.1E-15 120.3 10.7 108 229-340 165-344 (380)
83 PHA02624 large T antigen; Prov 99.2 2.4E-11 5.1E-16 128.3 5.6 60 81-144 10-71 (647)
84 PRK14295 chaperone protein Dna 99.2 1.5E-10 3.2E-15 119.1 11.1 127 208-339 160-357 (389)
85 PRK14291 chaperone protein Dna 99.1 1.7E-10 3.6E-15 118.6 10.8 126 207-337 149-345 (382)
86 PRK14277 chaperone protein Dna 99.1 1E-10 2.2E-15 120.4 9.1 107 229-339 172-350 (386)
87 PRK14296 chaperone protein Dna 99.1 1.1E-10 2.4E-15 119.4 8.6 129 208-340 143-347 (372)
88 PRK01773 hscB co-chaperone Hsc 99.1 1.3E-10 2.9E-15 105.9 7.0 67 82-148 2-75 (173)
89 PTZ00037 DnaJ_C chaperone prot 99.1 3.1E-10 6.8E-15 117.4 10.6 108 228-337 165-347 (421)
90 PF00684 DnaJ_CXXCXGXG: DnaJ c 99.1 5.2E-11 1.1E-15 91.5 3.6 57 232-288 1-66 (66)
91 PRK14283 chaperone protein Dna 99.1 1.3E-10 2.8E-15 119.2 7.5 106 229-338 163-340 (378)
92 COG5407 SEC63 Preprotein trans 99.1 6.8E-11 1.5E-15 118.5 4.7 69 81-149 97-170 (610)
93 TIGR00714 hscB Fe-S protein as 99.0 5.3E-10 1.2E-14 100.7 6.4 57 93-149 2-63 (157)
94 KOG1150 Predicted molecular ch 98.9 2.6E-09 5.6E-14 96.8 5.3 66 80-145 51-117 (250)
95 PRK14299 chaperone protein Dna 98.7 4E-08 8.7E-13 97.4 9.3 69 340-416 125-194 (291)
96 COG5269 ZUO1 Ribosome-associat 98.7 1.8E-08 4E-13 95.3 4.5 70 79-148 40-114 (379)
97 PF01556 CTDII: DnaJ C termina 98.6 8.4E-08 1.8E-12 76.7 6.6 47 294-340 27-74 (81)
98 PRK10266 curved DNA-binding pr 98.6 1.4E-07 3.1E-12 94.2 9.1 73 342-416 115-201 (306)
99 PLN03165 chaperone protein dna 98.4 2.8E-07 6.1E-12 77.5 3.8 56 228-292 40-100 (111)
100 KOG1789 Endocytosis protein RM 98.3 7.1E-07 1.5E-11 97.5 5.8 57 77-136 1276-1336(2235)
101 KOG0712 Molecular chaperone (D 98.3 1.5E-06 3.3E-11 86.4 6.7 43 295-338 280-324 (337)
102 KOG0568 Molecular chaperone (D 98.2 9.9E-07 2.1E-11 81.9 4.6 57 81-138 46-103 (342)
103 TIGR02642 phage_xxxx uncharact 98.1 2.7E-06 5.9E-11 78.1 4.4 49 264-313 99-149 (186)
104 TIGR03835 termin_org_DnaJ term 97.8 8E-05 1.7E-09 80.6 9.6 70 82-152 2-71 (871)
105 KOG0723 Molecular chaperone (D 97.7 5.7E-05 1.2E-09 62.2 4.7 61 74-138 48-108 (112)
106 KOG3192 Mitochondrial J-type c 97.6 6.2E-05 1.4E-09 66.2 4.5 69 79-147 5-80 (168)
107 COG1107 Archaea-specific RecJ- 97.4 8.3E-05 1.8E-09 77.8 3.2 59 231-290 4-80 (715)
108 PF00684 DnaJ_CXXCXGXG: DnaJ c 97.3 0.00012 2.6E-09 56.1 2.1 44 228-274 14-66 (66)
109 COG1076 DjlA DnaJ-domain-conta 96.4 0.0027 5.8E-08 58.3 3.7 69 83-151 2-77 (174)
110 PLN03165 chaperone protein dna 96.4 0.0021 4.5E-08 54.3 2.5 41 231-278 54-100 (111)
111 KOG2813 Predicted molecular ch 96.2 0.0049 1.1E-07 60.3 4.0 61 229-299 198-277 (406)
112 COG1107 Archaea-specific RecJ- 96.2 0.0043 9.4E-08 65.3 3.8 46 229-277 18-81 (715)
113 COG1076 DjlA DnaJ-domain-conta 96.0 0.0038 8.2E-08 57.3 2.2 54 82-135 113-173 (174)
114 TIGR02642 phage_xxxx uncharact 95.6 0.012 2.6E-07 54.3 3.9 30 247-278 100-129 (186)
115 KOG2813 Predicted molecular ch 95.1 0.013 2.7E-07 57.5 2.3 53 230-291 188-258 (406)
116 KOG0431 Auxilin-like protein a 94.9 0.027 5.9E-07 59.2 4.4 46 90-135 396-448 (453)
117 PF03656 Pam16: Pam16; InterP 92.5 0.34 7.4E-06 42.0 6.0 59 79-141 55-113 (127)
118 KOG2824 Glutaredoxin-related p 88.9 0.34 7.5E-06 47.0 3.0 36 248-290 231-274 (281)
119 KOG0715 Molecular chaperone (D 86.6 0.75 1.6E-05 45.7 4.0 76 224-303 176-256 (288)
120 cd03031 GRX_GRX_like Glutaredo 84.3 0.83 1.8E-05 40.7 2.8 12 279-290 134-145 (147)
121 PF11833 DUF3353: Protein of u 79.8 4.9 0.00011 37.5 6.2 38 91-136 1-38 (194)
122 PF14687 DUF4460: Domain of un 77.9 5.1 0.00011 34.0 5.2 46 92-137 4-53 (112)
123 KOG0724 Zuotin and related mol 77.6 2.2 4.9E-05 43.0 3.6 54 94-147 4-61 (335)
124 PF13446 RPT: A repeated domai 73.5 5.8 0.00013 29.6 4.0 45 82-137 5-49 (62)
125 PRK14714 DNA polymerase II lar 73.4 2.9 6.4E-05 48.7 3.3 72 212-294 643-725 (1337)
126 smart00709 Zpr1 Duplicated dom 72.9 4.6 0.0001 36.5 3.9 20 295-314 81-100 (160)
127 TIGR00630 uvra excinuclease AB 72.8 2.4 5.1E-05 48.8 2.5 28 248-275 738-770 (924)
128 COG1198 PriA Primosomal protei 71.1 3.2 7E-05 46.3 3.0 51 228-287 434-484 (730)
129 TIGR00310 ZPR1_znf ZPR1 zinc f 71.0 7 0.00015 36.4 4.8 20 295-314 80-100 (192)
130 PRK04023 DNA polymerase II lar 70.0 3.5 7.6E-05 46.9 2.9 68 212-292 609-677 (1121)
131 PRK00349 uvrA excinuclease ABC 60.5 5.1 0.00011 46.3 2.0 28 248-275 740-772 (943)
132 PRK14873 primosome assembly pr 58.8 8 0.00017 43.0 3.1 49 229-287 383-431 (665)
133 TIGR00340 zpr1_rel ZPR1-relate 58.2 11 0.00025 34.1 3.5 20 295-314 78-98 (163)
134 TIGR00630 uvra excinuclease AB 57.1 4.6 0.0001 46.5 1.0 30 265-294 737-775 (924)
135 PRK00635 excinuclease ABC subu 57.1 6.3 0.00014 48.4 2.1 29 248-276 1609-1642(1809)
136 PF03833 PolC_DP2: DNA polymer 55.9 3.8 8.2E-05 45.9 0.0 52 229-292 655-706 (900)
137 cd03031 GRX_GRX_like Glutaredo 53.2 13 0.00028 33.1 3.0 41 230-276 100-145 (147)
138 KOG2824 Glutaredoxin-related p 53.2 14 0.00029 36.2 3.2 47 230-285 230-280 (281)
139 TIGR00595 priA primosomal prot 52.8 10 0.00022 40.7 2.7 51 228-287 212-262 (505)
140 PF07709 SRR: Seven Residue Re 48.0 10 0.00022 19.8 0.9 13 124-136 2-14 (14)
141 PRK12336 translation initiatio 46.9 45 0.00098 31.3 5.7 14 226-239 95-108 (201)
142 PF04246 RseC_MucC: Positive r 46.6 25 0.00054 30.5 3.7 23 293-315 41-63 (135)
143 PRK00349 uvrA excinuclease ABC 46.5 13 0.00029 42.9 2.5 33 265-297 739-780 (943)
144 PRK05580 primosome assembly pr 46.5 14 0.0003 41.3 2.5 50 229-287 381-430 (679)
145 PF14353 CpXC: CpXC protein 44.7 18 0.00039 31.0 2.5 12 264-275 38-49 (128)
146 PF10041 DUF2277: Uncharacteri 43.1 1.3E+02 0.0028 23.7 6.6 52 85-137 6-61 (78)
147 PF09538 FYDLN_acid: Protein o 43.1 14 0.00031 31.1 1.5 26 228-253 8-33 (108)
148 COG0178 UvrA Excinuclease ATPa 42.7 18 0.00039 40.8 2.6 14 279-292 754-767 (935)
149 COG5552 Uncharacterized conser 41.7 98 0.0021 24.2 5.7 29 83-111 4-32 (88)
150 PRK03564 formate dehydrogenase 38.7 30 0.00065 34.7 3.3 20 266-285 214-233 (309)
151 PF08792 A2L_zn_ribbon: A2L zi 37.4 22 0.00049 23.2 1.4 10 248-257 5-14 (33)
152 COG0178 UvrA Excinuclease ATPa 34.5 30 0.00065 39.1 2.7 33 247-279 731-768 (935)
153 TIGR02300 FYDLN_acid conserved 33.6 26 0.00056 30.3 1.6 27 228-254 8-34 (129)
154 PRK05978 hypothetical protein; 33.4 21 0.00045 31.8 1.1 8 278-285 52-59 (148)
155 PRK12380 hydrogenase nickel in 33.0 40 0.00086 28.5 2.7 37 219-256 59-96 (113)
156 PRK14051 negative regulator Gr 32.0 1.4E+02 0.0031 25.0 5.6 70 326-396 48-119 (123)
157 PRK14559 putative protein seri 31.9 26 0.00056 38.8 1.8 49 230-287 2-50 (645)
158 PRK00564 hypA hydrogenase nick 31.3 56 0.0012 27.8 3.4 31 227-257 69-99 (117)
159 PF12434 Malate_DH: Malate deh 30.7 54 0.0012 20.4 2.2 16 96-111 10-25 (28)
160 PF07295 DUF1451: Protein of u 29.9 53 0.0012 29.2 3.1 33 244-276 110-142 (146)
161 cd01388 SOX-TCF_HMG-box SOX-TC 29.5 1.1E+02 0.0023 23.2 4.4 42 101-147 14-55 (72)
162 PRK00635 excinuclease ABC subu 29.2 18 0.0004 44.5 0.0 29 265-293 1608-1645(1809)
163 PF07092 DUF1356: Protein of u 28.6 29 0.00064 33.3 1.3 10 404-413 202-211 (238)
164 PF09862 DUF2089: Protein of u 28.6 36 0.00078 28.9 1.7 20 267-286 1-20 (113)
165 PF09297 zf-NADH-PPase: NADH p 27.0 47 0.001 21.2 1.6 24 248-271 5-28 (32)
166 smart00276 GLECT Galectin. Gal 26.7 70 0.0015 27.3 3.3 42 375-416 3-49 (128)
167 TIGR00100 hypA hydrogenase nic 25.9 66 0.0014 27.2 2.9 29 227-256 68-96 (115)
168 COG5216 Uncharacterized conser 25.1 66 0.0014 23.9 2.3 12 208-219 30-41 (67)
169 cd00084 HMG-box High Mobility 24.8 1.4E+02 0.003 21.5 4.2 43 100-147 12-54 (66)
170 cd01390 HMGB-UBF_HMG-box HMGB- 24.6 1.4E+02 0.003 21.7 4.2 40 103-147 15-54 (66)
171 PRK00398 rpoP DNA-directed RNA 24.1 63 0.0014 22.4 2.0 7 265-271 22-28 (46)
172 PRK03681 hypA hydrogenase nick 23.6 66 0.0014 27.2 2.4 19 219-237 59-78 (114)
173 KOG0315 G-protein beta subunit 23.3 81 0.0017 30.8 3.1 31 349-379 18-50 (311)
174 TIGR01562 FdhE formate dehydro 23.3 76 0.0017 31.8 3.1 16 99-114 100-115 (305)
175 PF03589 Antiterm: Antitermina 22.6 33 0.00072 28.1 0.4 12 265-276 33-44 (95)
176 PF07092 DUF1356: Protein of u 22.5 38 0.00083 32.6 0.8 10 248-257 40-49 (238)
177 PF01155 HypA: Hydrogenase exp 22.3 49 0.0011 27.9 1.4 29 227-256 68-96 (113)
178 cd01389 MATA_HMG-box MATA_HMG- 22.2 1.7E+02 0.0036 22.4 4.3 43 100-147 13-55 (77)
179 PF14706 Tnp_DNA_bind: Transpo 20.7 1.4E+02 0.003 22.2 3.3 41 97-139 15-57 (58)
180 COG2214 CbpA DnaJ-class molecu 20.6 2.4E+02 0.0053 25.3 5.9 68 346-416 150-218 (237)
181 PF07191 zinc-ribbons_6: zinc- 20.3 83 0.0018 24.4 2.1 40 231-276 3-42 (70)
182 PF13719 zinc_ribbon_5: zinc-r 20.1 56 0.0012 21.7 1.0 10 230-239 3-12 (37)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.9e-86 Score=655.95 Aligned_cols=329 Identities=44% Similarity=0.799 Sum_probs=291.5
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccC
Q 013183 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (448)
Q Consensus 80 ~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~ 159 (448)
+.+|||+||||+++||.+|||+|||+||++||||+|+.+++|+++|++|+|||||||||+||++||+||..+.++..
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg--- 78 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGG--- 78 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCC---
Confidence 46799999999999999999999999999999999998899999999999999999999999999999887654211
Q ss_pred CCCCCccccCCCCCceecccccccccccchhcccccc--------ccccCCCCcEEEeeeehhhhcccccceeeeceeee
Q 013183 160 GDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (448)
Q Consensus 160 ~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~--------~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~ 231 (448)
++++. |. .|++.|.++|+++|++ ....++.|+.+.|+|||+|||.|+++++.+++.+.
T Consensus 79 --~gg~g-------~~-----~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~ 144 (371)
T COG0484 79 --FGGFG-------FG-----GFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVT 144 (371)
T ss_pred --cCCCC-------cC-----CCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeE
Confidence 11110 10 0111345566666632 12457899999999999999999999999999999
Q ss_pred CCCCCCCCccCCCccccCCCccceeEEEeC------CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCC
Q 013183 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (448)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~ 305 (448)
|+.|+|+|++.+....+|+.|+|+|++.+. .++++|+.|+|+|++++++|.+|+|.|++...++|+|+||||+.
T Consensus 145 C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv~ 224 (371)
T COG0484 145 CSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVD 224 (371)
T ss_pred CCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCCc
Confidence 999999999999999999999999986543 34789999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCCc
Q 013183 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ 385 (448)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g~ 385 (448)
+|++|++.|+|+++.+|+++|||||+|.|++|+.|.|+|+||+++++|++.+|++|++++||||||.++|+||+|+++|+
T Consensus 225 ~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~~~l~ip~Gtq~G~ 304 (371)
T COG0484 225 DGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRVKLKIPAGTQTGE 304 (371)
T ss_pred cCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCCEEEecCCCCccCc
Confidence 99999999999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHcCC
Q 013183 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERVRA 426 (448)
Q Consensus 386 ~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~~~ 426 (448)
+++|+|+|||.... ..+|||||+++|++|+ .++|++++.+
T Consensus 305 ~~rl~gkG~p~~~~-~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~~ 349 (371)
T COG0484 305 VFRLRGKGMPKLRS-GGRGDLYVRVKVETPKNLSDEQKELLEEFAK 349 (371)
T ss_pred EEEEcCCCccccCC-CCcCCEEEEEEEEcCCCCCHHHHHHHHHHHH
Confidence 99999999997533 2469999999999999 6666666554
No 2
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.1e-78 Score=612.67 Aligned_cols=334 Identities=33% Similarity=0.638 Sum_probs=285.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
..|||++|||+++|+.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||+||+.||++|+.+..... +
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~---~ 78 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSS---G 78 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCC---C
Confidence 469999999999999999999999999999999997 578999999999999999999999999999876543210 0
Q ss_pred CCCCccccCCCCCceecccc----cccccccchhccccccc-----cccCCCCcEEEeeeehhhhcccccceeeeceeee
Q 013183 161 DAEGFRYAGDAEGFRYAYQT----HFSDSFHKIFSEIFEDE-----TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (448)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~----~f~~~f~~~Fs~~f~~~-----~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~ 231 (448)
...+| .+|+.+|.. .| +.|.++|+++|++. ...+++|++++|.|||+|+|+|+++++.+.+.+.
T Consensus 79 ~~~~~------~~~~~~~~~~~~~g~-~~f~d~f~~~fggg~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~ 151 (372)
T PRK14296 79 FSSNF------GDFEDLFSNMGSSGF-SSFTNIFSDFFGSNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTN 151 (372)
T ss_pred cCcCC------Ccccccccccccccc-ccchhhhhhhcCCCccCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeec
Confidence 00011 112211211 11 12456677777531 2346889999999999999999999999999999
Q ss_pred CCCCCCCCccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCC
Q 013183 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (448)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG 303 (448)
|+.|+|+|........+|+.|+|+|.+... +++++|+.|+|+|++++..|..|+|.|++.+.++++|.||||
T Consensus 152 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G 231 (372)
T PRK14296 152 CSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKG 231 (372)
T ss_pred cCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEECCC
Confidence 999999999888888999999999987532 235799999999999999999999999999999999999999
Q ss_pred CCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccC-CCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCC
Q 013183 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRD-GADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQ 382 (448)
Q Consensus 304 ~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~-G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~ 382 (448)
+++|++|+|+|+|++...++.+|||+|+|+++||+.|+|+ |+||+++++|+|.|||+|+++.|+||||+++|+||++++
T Consensus 232 ~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~t~ 311 (372)
T PRK14296 232 IRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPKSIN 311 (372)
T ss_pred CCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCCEEEEECCccC
Confidence 9999999999999998667789999999999999999995 899999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHcC
Q 013183 383 PGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERVR 425 (448)
Q Consensus 383 ~g~~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~~ 425 (448)
||++++|+|+|||.......+|||||+|+|+||+ ++++++++.
T Consensus 312 ~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l~ 359 (372)
T PRK14296 312 SNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQIY 359 (372)
T ss_pred CCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 9999999999999653334579999999999997 445555443
No 3
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.5e-76 Score=601.82 Aligned_cols=325 Identities=32% Similarity=0.634 Sum_probs=279.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
..|||+||||+++||.+|||+|||+||++||||+|+.+++|+++|++|++||+||+||.+|++||+||+.+.... .+
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~---~~ 78 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQA---GA 78 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccC---CC
Confidence 369999999999999999999999999999999998778899999999999999999999999999987654311 00
Q ss_pred CCCCccccCCCCCceecccccccccccchhcccccc-------ccccCCCCcEEEeeeehhhhcccccceeeeceeeeCC
Q 013183 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (448)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~-------~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~ 233 (448)
.. ..|.++|+ .|.++|+++|+. ....+++|++++|.|||+|+|+|+++++.+.+.+.|+
T Consensus 79 ~~---------~~~~~~f~-----~~~~~F~~~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~ 144 (369)
T PRK14288 79 SQ---------SDFSDFFE-----DLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCE 144 (369)
T ss_pred Cc---------cccccchh-----hHHHHHHhhcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCC
Confidence 00 11222221 122344444431 1134688999999999999999999999999999999
Q ss_pred CCCCCCccCCCccccCCCccceeEEEeC----CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCCCCCE
Q 013183 234 SCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309 (448)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~~G~~ 309 (448)
.|+|+|.... ...+|+.|+|+|.+... .++++|+.|.|+|+++...|..|+|.|++.+.++++|.||||+++|++
T Consensus 145 ~C~G~G~~~~-~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~ 223 (369)
T PRK14288 145 SCDGTGAKDK-ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNR 223 (369)
T ss_pred CCCCcccCCC-CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCE
Confidence 9999999765 57899999999987543 346799999999999999999999999999999999999999999999
Q ss_pred EEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCe-EEEEeCCCCCCCcEEE
Q 013183 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLV 388 (448)
Q Consensus 310 i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~ 388 (448)
|+|+|+|++.+ ++.+|||+|+|+|++|+.|+|+|+||+++++|+|.|||+|+++.|+||||+ ++|+||+++++|++++
T Consensus 224 i~l~g~G~~~~-~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~ 302 (369)
T PRK14288 224 MVLKNKGNEYE-KGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFA 302 (369)
T ss_pred EEEccCccCCC-CCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEE
Confidence 99999999965 568999999999999999999999999999999999999999999999997 8999999999999999
Q ss_pred EcCCCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHcC
Q 013183 389 LRGKGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERVR 425 (448)
Q Consensus 389 l~g~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~~ 425 (448)
|+|+|||..+. ..+|||||+|+|++|+ ++++++++.
T Consensus 303 i~g~G~p~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~ 343 (369)
T PRK14288 303 FRNEGVKHPES-SYRGSLIVELQVIYPKSLNKEQQELLEKLH 343 (369)
T ss_pred EcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 99999997653 2479999999999997 444444443
No 4
>PRK14279 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.1e-76 Score=601.85 Aligned_cols=334 Identities=36% Similarity=0.692 Sum_probs=284.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCc-cc--
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENE-KY-- 157 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~-~~-- 157 (448)
.+|||++|||+++|+.+|||+|||+||++||||+|+++++|+++|++|++||+||+||+||++||+||+.+..+. ..
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~~ 87 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGRR 87 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhcccccccccc
Confidence 479999999999999999999999999999999998778899999999999999999999999999986432111 00
Q ss_pred --cCCCCCCccccC--CCCCceeccccccc---ccccchhccccccc-------cccCCCCcEEEeeeehhhhcccccce
Q 013183 158 --SAGDAEGFRYAG--DAEGFRYAYQTHFS---DSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKH 223 (448)
Q Consensus 158 --~~~~~~~~~~~~--~~~~f~~~~~~~f~---~~f~~~Fs~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~ 223 (448)
+.+.+.+|.+.. ....|.++|+..++ .+|.++|+.+|++. ...+++|++++|.|||+|+|+|++++
T Consensus 88 ~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~~~ 167 (392)
T PRK14279 88 FDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTMP 167 (392)
T ss_pred ccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeEEE
Confidence 000111221100 01123344432111 23556777776521 13468899999999999999999999
Q ss_pred eeeceeeeCCCCCCCCccCCCccccCCCccceeEEEeC----CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEE
Q 013183 224 VSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVT 299 (448)
Q Consensus 224 i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~ 299 (448)
+.+.+.+.|+.|+|+|........+|+.|+|+|.++.. .++++|+.|+|+|++++..|..|+|.|++.+.++++|.
T Consensus 168 v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~~~~~V~ 247 (392)
T PRK14279 168 LRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTINVR 247 (392)
T ss_pred EeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeCCcCCCCCCCeEEEEeeeeEEE
Confidence 99999999999999999988888999999999987543 35789999999999999999999999999999999999
Q ss_pred ecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCC
Q 013183 300 IPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPK 379 (448)
Q Consensus 300 IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~ 379 (448)
||||+++|++|+|+|+|++.+.+..+|||+|+|+|+||+.|+|+|+||+++++|+|.+|++|++++|+|+||+++|+||+
T Consensus 248 Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i~v~Ip~ 327 (392)
T PRK14279 248 IPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVGVKVPA 327 (392)
T ss_pred eCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceEEEEECC
Confidence 99999999999999999998777788999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC
Q 013183 380 GVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 380 g~~~g~~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~ 416 (448)
++++|++++|+|+|||..+ ..+|||||+|+|.||+
T Consensus 328 g~~~g~~iri~g~G~p~~~--~~~GDL~I~~~v~~P~ 362 (392)
T PRK14279 328 GTADGRILRVRGRGVPKRS--GGAGDLLVTVKVAVPP 362 (392)
T ss_pred CCCCCCEEEECCCCCCCCC--CCCCCEEEEEEEECCC
Confidence 9999999999999999753 3479999999999997
No 5
>PRK14286 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.9e-75 Score=594.21 Aligned_cols=332 Identities=33% Similarity=0.684 Sum_probs=284.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
..|||++|||+++|+.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||+||+++..... +..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~-~~~ 81 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGA-GGF 81 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhcccc-CCC
Confidence 4699999999999999999999999999999999987788999999999999999999999999999876543210 000
Q ss_pred CCCCccccCCCCCceecccccccccccchhccccccc-----------cccCCCCcEEEeeeehhhhcccccceeeecee
Q 013183 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-----------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAF 229 (448)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~~-----------~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~ 229 (448)
...+| .+|..+| +.|.++|+.+|++. ...+++|++++|.|||+|+|+|+++++.+.+.
T Consensus 82 ~~~~~------~~~~~~~-----~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~ 150 (372)
T PRK14286 82 GQGAY------TDFSDIF-----GDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRL 150 (372)
T ss_pred CCCCc------ccccccc-----cchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeecc
Confidence 00001 0111111 12345555555421 13468899999999999999999999999999
Q ss_pred eeCCCCCCCCccCCCccccCCCccceeEEEeC----CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCC
Q 013183 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (448)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~ 305 (448)
+.|+.|+|+|........+|+.|+|.|.+... +++++|+.|+|+|++++..|..|+|.|++.+.++++|.||||++
T Consensus 151 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~ 230 (372)
T PRK14286 151 ESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVE 230 (372)
T ss_pred ccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCC
Confidence 99999999999888888899999999987542 35789999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCe-EEEEeCCCCCCC
Q 013183 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPG 384 (448)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~-~~v~ip~g~~~g 384 (448)
+|++|+|+|+|++...+..+|||||+|+|+||+.|+|+|+||+++++|+|.||++|+++.|+||||+ ++|+||+++++|
T Consensus 231 ~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g 310 (372)
T PRK14286 231 TGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESG 310 (372)
T ss_pred CCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCC
Confidence 9999999999999876677899999999999999999999999999999999999999999999997 899999999999
Q ss_pred cEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHcC
Q 013183 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERVR 425 (448)
Q Consensus 385 ~~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~~ 425 (448)
++++|+|+|||..+. ..+|||||+|+|.||+ .+++++++.
T Consensus 311 ~~~ri~G~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~ 355 (372)
T PRK14286 311 QVFRLKGHGMPYLGA-YGKGDQHVIVKIEIPKKITRRQRELIEEFA 355 (372)
T ss_pred cEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 999999999997643 2579999999999998 444455443
No 6
>PRK14284 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2e-74 Score=590.71 Aligned_cols=341 Identities=35% Similarity=0.666 Sum_probs=284.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCCC
Q 013183 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (448)
Q Consensus 82 ~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~~ 161 (448)
.|||+||||+++||.+|||+|||+||++||||+|++++.|+++|++|++||+||+||.+|+.||++|+++......+. .
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~-~ 79 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGF-G 79 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCc-C
Confidence 389999999999999999999999999999999998888999999999999999999999999999876542110000 0
Q ss_pred CCCccc-cCCCCCceecccccccccccchhcccccc-----------ccccCCCCcEEEeeeehhhhcccccceeeecee
Q 013183 162 AEGFRY-AGDAEGFRYAYQTHFSDSFHKIFSEIFED-----------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAF 229 (448)
Q Consensus 162 ~~~~~~-~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~-----------~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~ 229 (448)
..+|.. ......|..+|+..|+ .+.++|+.+|++ ....++.|++++|.|||+|+|+|+++++.+.+.
T Consensus 80 ~~g~~~~~~~~~~~~~~f~~~~~-~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~ 158 (391)
T PRK14284 80 GAGMGNMEDALRTFMGAFGGEFG-GGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGY 158 (391)
T ss_pred CCCcCcccchhhhcccccccccc-ccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeee
Confidence 011110 0001112222221111 113455555542 112467899999999999999999999999999
Q ss_pred eeCCCCCCCCccCCCccccCCCccceeEEEeC----CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCC
Q 013183 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (448)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~ 305 (448)
+.|+.|+|+|.........|+.|+|+|.+... .++++|+.|+|.|+++++.|..|+|.|++.+.++++|.||||++
T Consensus 159 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 238 (391)
T PRK14284 159 KSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVD 238 (391)
T ss_pred ccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEEEEEEECCCCC
Confidence 99999999999888888999999999987532 35789999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCC--CeEEEEeCCCCCC
Q 013183 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLS--GKVQVKIPKGVQP 383 (448)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tld--G~~~v~ip~g~~~ 383 (448)
+|++|+|+|+|++++.++.+|||||+|+++||+.|+|+|+||+++++|+|.+|++|++++|+|+| +.++|+||+++++
T Consensus 239 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~ 318 (391)
T PRK14284 239 SGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQS 318 (391)
T ss_pred CCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccCC
Confidence 99999999999998878889999999999999999999999999999999999999999999999 5689999999999
Q ss_pred CcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHcC
Q 013183 384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERVR 425 (448)
Q Consensus 384 g~~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~~ 425 (448)
|++++|+|+|||..+. ..+|||||+|+|.+|+ .+++++++.
T Consensus 319 g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~ 364 (391)
T PRK14284 319 GTILKVRGQGFPNVHG-KGRGDLLVRISVETPQNLSEEQKELLRQFA 364 (391)
T ss_pred CeEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 9999999999997643 2479999999999997 445555543
No 7
>PRK14277 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.9e-74 Score=588.62 Aligned_cols=339 Identities=40% Similarity=0.761 Sum_probs=282.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
..|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||++|+++......+.+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~ 83 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQG 83 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccccC
Confidence 46999999999999999999999999999999999877889999999999999999999999999998766532111110
Q ss_pred CC--CCccccCCCCCceecccccccccccchhccccccc------cccCCCCcEEEeeeehhhhcccccceeeeceeeeC
Q 013183 161 DA--EGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (448)
Q Consensus 161 ~~--~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~~------~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C 232 (448)
+. .++. . ..|...+ ..|.+.|.++|+.+|++. ...+++|++++|.|||+|+|+|+++++.+++.+.|
T Consensus 84 ~~~~~g~~--~--~~~~~~~-~~~~d~f~~~F~~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C 158 (386)
T PRK14277 84 GFGQGGFG--G--GGFDFDF-GGFGDIFEDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKC 158 (386)
T ss_pred CcCCCCcc--c--cCccccc-cchhHHHHHhhcccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccC
Confidence 00 1110 0 0010000 011112223333333321 13468899999999999999999999999999999
Q ss_pred CCCCCCCccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCC
Q 013183 233 DSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304 (448)
Q Consensus 233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~ 304 (448)
+.|+|+|........+|+.|+|.|.++.. ...++|+.|+|+|.+++..|..|+|.|++.+.++++|.||||+
T Consensus 159 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~ 238 (386)
T PRK14277 159 DVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGI 238 (386)
T ss_pred CCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEEecCCCc
Confidence 99999999888888999999999986532 1357999999999999999999999999999999999999999
Q ss_pred CCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCC
Q 013183 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPG 384 (448)
Q Consensus 305 ~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g 384 (448)
++|++|+|+|+|++...+..+|||+|+|+|+||+.|+|+|+||+++++|++.||++|+++.|+||||+++|+||+++++|
T Consensus 239 ~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g 318 (386)
T PRK14277 239 DDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEGTQTG 318 (386)
T ss_pred cCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEECCCCCCC
Confidence 99999999999998766677899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHcC
Q 013183 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERVR 425 (448)
Q Consensus 385 ~~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~~ 425 (448)
++++|+|+|||..+.. .+|||||+|+|+||+ ++++++++.
T Consensus 319 ~~~ri~g~G~p~~~~~-~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~ 363 (386)
T PRK14277 319 TKFRLRGKGIPHLRGR-GRGDQIVKVYIEVPKKLTEKQKELLREFE 363 (386)
T ss_pred CEEEECCCCCCCCCCC-CCCCEEEEEEEEeCCCCCHHHHHHHHHHH
Confidence 9999999999976432 479999999999998 444455443
No 8
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.8e-74 Score=587.71 Aligned_cols=327 Identities=40% Similarity=0.705 Sum_probs=282.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
..|||+||||+++|+.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|+.||++|+.+..... +
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~-~-- 79 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQY-S-- 79 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccC-ChhHHHHHHHHHHHHHHhcchHhhhhhhhcCcccccccc-C--
Confidence 469999999999999999999999999999999997 477899999999999999999999999999876543210 0
Q ss_pred CCCCccccCCCCCceecccccccccccchhcccccc------ccccCCCCcEEEeeeehhhhcccccceeeeceeeeCCC
Q 013183 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (448)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~------~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~~ 234 (448)
+..+|. + ..| ++|.++|+.+|++ ....++.|++++|.|||+|+|+|+++++.+.+.+.|+.
T Consensus 80 ~~~~~~--~--~~~---------~~~~d~f~~~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~ 146 (377)
T PRK14298 80 AEDIFR--G--ADF---------GGFGDIFEMFFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCST 146 (377)
T ss_pred cccccc--c--CCc---------CcchhhhHhhhcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCC
Confidence 000110 0 001 1133455555542 12357889999999999999999999999999999999
Q ss_pred CCCCCccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCCC
Q 013183 235 CHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306 (448)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~~ 306 (448)
|+|+|........+|+.|+|.|.+... +++++|+.|+|+|++++..|..|+|.|++.+.++++|.||||+++
T Consensus 147 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~ 226 (377)
T PRK14298 147 CSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADS 226 (377)
T ss_pred CCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCC
Confidence 999999988888999999999986532 247899999999999999999999999999999999999999999
Q ss_pred CCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCCcE
Q 013183 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQL 386 (448)
Q Consensus 307 G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~ 386 (448)
|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.||++|+++.|+|+||++.|+||+++++|++
T Consensus 227 G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~ 306 (377)
T PRK14298 227 GLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSV 306 (377)
T ss_pred CCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCCEEEEeCCCcccCCE
Confidence 99999999999977778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHcC
Q 013183 387 LVLRGKGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERVR 425 (448)
Q Consensus 387 ~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~~ 425 (448)
++|+|+|||..+. ..+|||||+|+|++|+ .++|++++.
T Consensus 307 lri~g~G~p~~~~-~~~GDL~V~~~V~~P~~ls~~~~~ll~~l~ 349 (377)
T PRK14298 307 FRLKDKGMPRLHG-HGKGDQLVKVIVKTPTKLTQEQKELLREFD 349 (377)
T ss_pred EEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 9999999997643 2479999999999997 444444443
No 9
>PRK14285 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.7e-74 Score=583.45 Aligned_cols=323 Identities=35% Similarity=0.669 Sum_probs=281.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCCC
Q 013183 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (448)
Q Consensus 82 ~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~~ 161 (448)
.|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||++++.+..+. . .
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~---~-~ 78 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGG---G-G 78 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccC---C-C
Confidence 69999999999999999999999999999999998878899999999999999999999999999987654311 0 0
Q ss_pred CCCccccCCCCCceecccccccccccchhccccccc-------cccCCCCcEEEeeeehhhhcccccceeeeceeeeCCC
Q 013183 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (448)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~~ 234 (448)
+.++. ++.++|... | +.|.++|+.+|++. ...+++|++++|.|||+|+|+|+++++.+++.+.|+.
T Consensus 79 ~~~~~--~g~~~~~~~----~-~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~ 151 (365)
T PRK14285 79 FEGFS--GGFSGFSDI----F-EDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCES 151 (365)
T ss_pred ccccC--CCccccccc----c-ccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCC
Confidence 00110 000111111 1 12446666666531 1346889999999999999999999999999999999
Q ss_pred CCCCCccCCCccccCCCccceeEEEeC----CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCCCCCEE
Q 013183 235 CHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310 (448)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~~G~~i 310 (448)
|+|+|.........|+.|+|+|+++.. +++++|+.|.|.|++++..|..|+|.|++.+.++++|.||||+++|++|
T Consensus 152 C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i 231 (365)
T PRK14285 152 CLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQI 231 (365)
T ss_pred CCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCEE
Confidence 999999888888999999999987643 3578999999999999999999999999999999999999999999999
Q ss_pred EECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCe-EEEEeCCCCCCCcEEEE
Q 013183 311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVL 389 (448)
Q Consensus 311 ~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~l 389 (448)
+|+|+|++.+.+..+|||||+|++++|+.|+|+|+||+++++|+|.||++|++++|+|+||+ ++|+||+++++|++++|
T Consensus 232 ~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~irl 311 (365)
T PRK14285 232 KMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQIII 311 (365)
T ss_pred EEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEEE
Confidence 99999999877777899999999999999999999999999999999999999999999996 89999999999999999
Q ss_pred cCCCCCCCCCCCCCCcEEEEEEEECCC
Q 013183 390 RGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 390 ~g~G~p~~~~~~~~GDL~V~~~V~~P~ 416 (448)
+|+|||..+.. .+|||||+|+|++|+
T Consensus 312 ~GkG~p~~~~~-~~GDL~V~~~v~~P~ 337 (365)
T PRK14285 312 KNEGMPILHTE-KFGNLILIIKIKTPK 337 (365)
T ss_pred CCCCccCCCCC-CCCCEEEEEEEECCC
Confidence 99999976432 469999999999997
No 10
>PRK14295 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.1e-74 Score=585.47 Aligned_cols=343 Identities=36% Similarity=0.695 Sum_probs=286.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhh----cccCCCCCc
Q 013183 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDR----RRSRGSENE 155 (448)
Q Consensus 80 ~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~----~~~~g~~~~ 155 (448)
+..|||+||||+++||.+|||+|||+||++||||+|+.+++|+++|++|++||+||+||.+|+.||+ ||+.+....
T Consensus 7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~ 86 (389)
T PRK14295 7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPG 86 (389)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccC
Confidence 3569999999999999999999999999999999998778899999999999999999999999999 876554311
Q ss_pred cccCCCCCCccccCCCCCceeccc----ccccccccchhcccccc----ccccCCCCcEEEeeeehhhhcccccceeeec
Q 013183 156 KYSAGDAEGFRYAGDAEGFRYAYQ----THFSDSFHKIFSEIFED----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFD 227 (448)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~~~~----~~f~~~f~~~Fs~~f~~----~~~~~g~di~~~l~isl~e~~~G~~~~i~~~ 227 (448)
. +.+...+|.++ ..+.|..+++ ..|++.|.++|+.+|++ ....+++|++++|.|||+|+|+|+++++.++
T Consensus 87 ~-~~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~ 164 (389)
T PRK14295 87 P-GGGGGGGFNFD-LGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLT 164 (389)
T ss_pred C-CCCCCCCCCcc-cccccccccccccccccccchhhhhcccccCCCCCCCCCCCCCEEEEEEEEHHHHhCCceEEEEee
Confidence 0 00000111110 0011111100 01122245566666652 1234688999999999999999999999999
Q ss_pred eeeeCCCCCCCCccCCCccccCCCccceeEEEeC----CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCC
Q 013183 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (448)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG 303 (448)
+.+.|+.|+|+|........+|+.|+|+|.+... .++++|+.|+|+|++++..|..|.|.|++.+.++++|.||||
T Consensus 165 r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G 244 (389)
T PRK14295 165 SQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAG 244 (389)
T ss_pred ccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEeccCCCCCCCCceEeeeeEEEEEeCCC
Confidence 9999999999999988888999999999987543 247799999999999999999999999999999999999999
Q ss_pred CCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCC-eEEEEeCCCCC
Q 013183 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQ 382 (448)
Q Consensus 304 ~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG-~~~v~ip~g~~ 382 (448)
+++|++|+|+|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|++++|+|+|| .++|+||++++
T Consensus 245 ~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~~ 324 (389)
T PRK14295 245 VSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGTP 324 (389)
T ss_pred CCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCccC
Confidence 99999999999999977777899999999999999999999999999999999999999999999999 58999999999
Q ss_pred CCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHcCC
Q 013183 383 PGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERVRA 426 (448)
Q Consensus 383 ~g~~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~~~ 426 (448)
+|++++|+|+|||..+ ..+|||||+|+|.||+ ++++++++..
T Consensus 325 ~g~~iri~G~G~p~~~--~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~~ 371 (389)
T PRK14295 325 NGRVLRVRGKGAVRKD--GTRGDLLVTVEVAVPKDLSGKAREALEAFRE 371 (389)
T ss_pred CCcEEEECCCCcCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9999999999999753 3479999999999998 4555555443
No 11
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.2e-73 Score=581.21 Aligned_cols=326 Identities=37% Similarity=0.689 Sum_probs=278.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~ 159 (448)
..|||++|||+++||.+|||+|||+||++||||+|+++ ++|+++|++|++||+||+||.+|+.||+++..+......+.
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~ 82 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET 82 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence 46999999999999999999999999999999999864 67899999999999999999999999999876543210000
Q ss_pred CCCCCccccCCCCCceecccccccccc-cchhcccccc--------ccccCCCCcEEEeeeehhhhcccccceeeeceee
Q 013183 160 GDAEGFRYAGDAEGFRYAYQTHFSDSF-HKIFSEIFED--------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFV 230 (448)
Q Consensus 160 ~~~~~~~~~~~~~~f~~~~~~~f~~~f-~~~Fs~~f~~--------~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~ 230 (448)
...++| |.++|.. |.+.| .++|+.+|++ ....+++|++++|.|||+|+|+|+++++.+.+.+
T Consensus 83 ~~~g~~--------~~~~~~~-~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~ 153 (369)
T PRK14282 83 ESGGGF--------FEDIFKD-FENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYE 153 (369)
T ss_pred CCCCcc--------ccccccc-ccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecc
Confidence 000111 1111111 11111 1455555542 1134688999999999999999999999999999
Q ss_pred eCCCCCCCCccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecC
Q 013183 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPA 302 (448)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ipp 302 (448)
.|+.|+|+|........+|+.|+|+|.+... .++++|+.|+|+|++++..|.+|+|.|++.+.++++|.|||
T Consensus 154 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~ 233 (369)
T PRK14282 154 TCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPA 233 (369)
T ss_pred cCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeCC
Confidence 9999999999888888999999999987532 23679999999999999999999999999999999999999
Q ss_pred CCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCe-EEEEeCCCC
Q 013183 303 GVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGV 381 (448)
Q Consensus 303 G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~-~~v~ip~g~ 381 (448)
|+++|++|+|+|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|+|.||++|+++.|+|+||+ ++|+||+++
T Consensus 234 G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~ 313 (369)
T PRK14282 234 GVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGT 313 (369)
T ss_pred CCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCc
Confidence 9999999999999999877788999999999999999999999999999999999999999999999996 899999999
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC
Q 013183 382 QPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 382 ~~g~~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~ 416 (448)
++|++++|+|+|||..+. ..+|||||+|+|.+|+
T Consensus 314 ~~g~~iri~GkG~p~~~~-~~~GDL~V~~~v~~P~ 347 (369)
T PRK14282 314 QPETVFRLKGKGLPNMRY-GRRGDLIVNVHVEIPK 347 (369)
T ss_pred CCCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence 999999999999997532 2479999999999997
No 12
>PRK14301 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.8e-74 Score=582.22 Aligned_cols=329 Identities=42% Similarity=0.766 Sum_probs=283.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
..|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||++|+.+..+. +
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~----~ 78 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGN----G 78 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccC----C
Confidence 469999999999999999999999999999999998778899999999999999999999999999987654321 1
Q ss_pred CCCCccccCCCCCceecccccccccccchhccccc--c------ccccCCCCcEEEeeeehhhhcccccceeeeceeeeC
Q 013183 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFE--D------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (448)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~--~------~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C 232 (448)
.+++|. +..+.| +.|.++|+.+|+ + ....+++|++++|.|||+|+|+|+++++.+.+.+.|
T Consensus 79 ~~~g~~--~~~~~~---------~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C 147 (373)
T PRK14301 79 GFGGFS--SAEDIF---------SHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTC 147 (373)
T ss_pred CCCCcc--cccccc---------cchHHHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccC
Confidence 111121 000111 112334444443 1 123468899999999999999999999999999999
Q ss_pred CCCCCCCccCCCccccCCCccceeEEEeC----CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCCCCC
Q 013183 233 DSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308 (448)
Q Consensus 233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~~G~ 308 (448)
+.|+|+|........+|+.|+|+|.+... .++++|+.|+|.|++++..|..|+|.|++.+.++++|.||||+++|+
T Consensus 148 ~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~ 227 (373)
T PRK14301 148 DDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGS 227 (373)
T ss_pred CCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCC
Confidence 99999999888888899999999987543 24789999999999999999999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCCcEEE
Q 013183 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLV 388 (448)
Q Consensus 309 ~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~ 388 (448)
+|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||+++++|+|.+|++|+++.|+|+||+++|+||+++++|++++
T Consensus 228 ~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i~v~ip~g~~~g~~~r 307 (373)
T PRK14301 228 RLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSGEVFR 307 (373)
T ss_pred EEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccEEEEECCCcCCCcEEE
Confidence 99999999997767789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHcC
Q 013183 389 LRGKGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERVR 425 (448)
Q Consensus 389 l~g~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~~ 425 (448)
|+|+|||..+. ..+|||||+|+|.+|+ .+++++++.
T Consensus 308 i~g~G~p~~~~-~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~ 348 (373)
T PRK14301 308 LRGKGLPYLGS-SQKGDLLVEVSVVTPTKLTKRQEELLREFE 348 (373)
T ss_pred EcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 99999997643 2479999999999997 444444444
No 13
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=5.2e-74 Score=588.79 Aligned_cols=318 Identities=30% Similarity=0.534 Sum_probs=272.6
Q ss_pred CCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCc
Q 013183 76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENE 155 (448)
Q Consensus 76 ~~~~~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~ 155 (448)
+..+...|||++|||+++||.+|||+|||+||++||||+|++ .++|++|++||+||+||.||+.||++|..+..+.
T Consensus 22 ~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~ 97 (421)
T PTZ00037 22 KREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGG 97 (421)
T ss_pred cccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccC
Confidence 344556899999999999999999999999999999999863 4899999999999999999999999976553210
Q ss_pred cccCCCCCCccccCCCCCceecccccccccccchhcccccc----ccccCCCCcEEEeeeehhhhcccccceeeeceeee
Q 013183 156 KYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (448)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~----~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~ 231 (448)
. . + ..| .++|+.+|++ ....+++|+.+.|.|||+|+|+|+++++.+.+.+.
T Consensus 98 ----~--~------~-~d~------------~d~f~~~Fggg~~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~ 152 (421)
T PTZ00037 98 ----E--Q------P-ADA------------SDLFDLIFGGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVI 152 (421)
T ss_pred ----C--C------C-cch------------hhhHHHhhccccccccccCCCCEEEEeeeeHHHHhCCCceEEEeecccc
Confidence 0 0 0 011 1233333331 12356899999999999999999999999999999
Q ss_pred CCCCCCCCccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEee--ecceeecCCcEEeceEEEEEEec
Q 013183 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIK--DHCMTCKGSGVVDGVKEVKVTIP 301 (448)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~--~~C~~C~g~G~~~~~~~l~V~Ip 301 (448)
|+.|+|+|.... ...+|+.|+|.|.++.. +++++|+.|+|+|+++. ++|..|+|.|++.+.++++|.||
T Consensus 153 C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip 231 (421)
T PTZ00037 153 CANCEGHGGPKD-AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNID 231 (421)
T ss_pred ccccCCCCCCCC-CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeC
Confidence 999999998644 57899999999975321 24679999999999985 89999999999999999999999
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCe-EEEEeCCC
Q 013183 302 AGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG 380 (448)
Q Consensus 302 pG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~-~~v~ip~g 380 (448)
||+.+|++|+|+|+|++.+ ++.||||||+|+++||+.|+|+|+||+++++|+|.|||+|+++.|+||||+ +.|+||++
T Consensus 232 ~G~~dG~~I~~~G~Gd~~~-~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g 310 (421)
T PTZ00037 232 KGVPNQHKITFHGEADEKP-NEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPG 310 (421)
T ss_pred CCCCCCcEEEEecccCCCC-CCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCC
Confidence 9999999999999999965 578999999999999999999999999999999999999999999999997 89999988
Q ss_pred --CCCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECC--C-----hHHHHHHc
Q 013183 381 --VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP--T-----WQRIVERV 424 (448)
Q Consensus 381 --~~~g~~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P--~-----~~~l~~~~ 424 (448)
++||++++|+|+|||..+.+..+|||||+|+|.|| + .+++++++
T Consensus 311 ~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~l 363 (421)
T PTZ00037 311 EVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSL 363 (421)
T ss_pred cccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHHh
Confidence 99999999999999976443458999999999999 5 44555543
No 14
>PRK14278 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.5e-73 Score=581.48 Aligned_cols=324 Identities=36% Similarity=0.661 Sum_probs=278.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCCC
Q 013183 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (448)
Q Consensus 82 ~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~~ 161 (448)
.|||+||||+++|+.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|+.||++|+.+..+. ..
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~----~~ 77 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAG----GG 77 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCCcccccc----CC
Confidence 59999999999999999999999999999999998 57899999999999999999999999999976422110 00
Q ss_pred CCCccccCCCCCceecccccccccccchhccccccc--------cccCCCCcEEEeeeehhhhcccccceeeeceeeeCC
Q 013183 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE--------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (448)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~~--------~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~ 233 (448)
..+|. .+| ++|.++|+.+|++. ...+++|+++.|.|||+|+|+|+++++.+++.+.|+
T Consensus 78 ~~g~~-----~~f---------~~~~d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~ 143 (378)
T PRK14278 78 GGGFG-----GGF---------GGLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCD 143 (378)
T ss_pred CCCCC-----cCc---------CchhHHHHHHhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCC
Confidence 01110 011 01234455555421 124688999999999999999999999999999999
Q ss_pred CCCCCCccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCC
Q 013183 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (448)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~ 305 (448)
.|+|+|........+|+.|+|+|.+... ..+++|+.|+|.|++++.+|..|+|.|++.+.++++|.||||++
T Consensus 144 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~ 223 (378)
T PRK14278 144 RCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVG 223 (378)
T ss_pred CCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCC
Confidence 9999999888888999999999986532 13679999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCC-CCeEEEEeCCCCCCC
Q 013183 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL-SGKVQVKIPKGVQPG 384 (448)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tl-dG~~~v~ip~g~~~g 384 (448)
+|++|+|+|+|++.+.+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|+ ++.+.|+||+++++|
T Consensus 224 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g 303 (378)
T PRK14278 224 DGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPG 303 (378)
T ss_pred CCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCC
Confidence 9999999999999877778899999999999999999999999999999999999999999999 556899999999999
Q ss_pred cEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHcC
Q 013183 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERVR 425 (448)
Q Consensus 385 ~~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~~ 425 (448)
++++|+|+|||..+. ..+|||||+|+|+||+ .+++++++.
T Consensus 304 ~~lrl~g~G~p~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~ 348 (378)
T PRK14278 304 SVITLRGRGMPHLRS-GGRGDLHAHVEVVVPTRLDHEDIELLRELK 348 (378)
T ss_pred cEEEECCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHH
Confidence 999999999997533 2579999999999997 455555554
No 15
>PRK14287 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.4e-73 Score=580.33 Aligned_cols=323 Identities=39% Similarity=0.731 Sum_probs=279.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
..|||++|||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|+.||+||+++..... +.+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~-~~~ 80 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGF-GGG 80 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCccccccc-CCC
Confidence 469999999999999999999999999999999997 478899999999999999999999999999876543210 000
Q ss_pred CCCCccccCCCCCceecccccccccccchhcccccc-------ccccCCCCcEEEeeeehhhhcccccceeeeceeeeCC
Q 013183 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (448)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~-------~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~ 233 (448)
.+. .|. +|.++|+.+|++ ....+++|++++|.|||+|+|.|+++++.+.+.+.|+
T Consensus 81 ~~~---------~f~---------~~~d~f~~~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~ 142 (371)
T PRK14287 81 GAG---------DFG---------GFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCG 142 (371)
T ss_pred CCc---------ccc---------chHHHHHhhhccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCC
Confidence 000 110 122344444432 1134688999999999999999999999999999999
Q ss_pred CCCCCCccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCC
Q 013183 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (448)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~ 305 (448)
.|+|+|........+|+.|+|+|.+... ..+++|+.|.|+|++++..|..|.|.|++.+.++++|.||||++
T Consensus 143 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 222 (371)
T PRK14287 143 TCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGID 222 (371)
T ss_pred CCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCC
Confidence 9999999888888899999999986532 13679999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCCc
Q 013183 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ 385 (448)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g~ 385 (448)
+|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||++++.|+|.+|++|++++|+|+||++.|+||+++++|+
T Consensus 223 ~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~ 302 (371)
T PRK14287 223 HGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGT 302 (371)
T ss_pred CCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEEEEECCCccCCc
Confidence 99999999999998766789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHc
Q 013183 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERV 424 (448)
Q Consensus 386 ~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~ 424 (448)
+++|+|+|||..+. ..+|||||+|+|.+|+ .+++++++
T Consensus 303 ~~ri~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l 345 (371)
T PRK14287 303 SFRLRGKGVPNVHG-RGQGDQHVQVRVVTPKNLTEKEKELMREF 345 (371)
T ss_pred EEEEcCCCccCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHH
Confidence 99999999997643 2479999999999998 44444444
No 16
>PRK14280 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.8e-73 Score=580.93 Aligned_cols=329 Identities=42% Similarity=0.750 Sum_probs=281.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
..|||+||||+++|+.+|||+|||+||++||||+|+ ++.|+++|++|++||+||+||.+|++||+||+++..+.. +.
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~-~~- 79 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGF-GG- 79 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCc-CC-
Confidence 369999999999999999999999999999999997 467899999999999999999999999999876543210 00
Q ss_pred CCCCccccCCCCCceecccccccccccchhcccccc-------ccccCCCCcEEEeeeehhhhcccccceeeeceeeeCC
Q 013183 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (448)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~-------~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~ 233 (448)
.+|. +.+|.. .| +|.++|+.+|++ ....+++|++++|.|||+|+|+|+++++.+.+.+.|+
T Consensus 80 --~~~~----~~~~~~----~~--~~~d~f~~~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~ 147 (376)
T PRK14280 80 --GGFG----GGDFGG----GF--GFEDIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCD 147 (376)
T ss_pred --CCCC----CCCccc----cc--cchhhHHHHhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCC
Confidence 0000 001100 01 133455555542 1124688999999999999999999999999999999
Q ss_pred CCCCCCccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCC
Q 013183 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (448)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~ 305 (448)
.|+|+|........+|+.|+|.|.+... .++++|+.|+|+|++++..|..|+|.|++.+.++++|.||||++
T Consensus 148 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~ 227 (376)
T PRK14280 148 TCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVD 227 (376)
T ss_pred CCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCc
Confidence 9999999888888999999999986532 13679999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCCc
Q 013183 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ 385 (448)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g~ 385 (448)
+|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.||++|+++.|+|+||++.|+||+++++|+
T Consensus 228 ~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~g~ 307 (376)
T PRK14280 228 NGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGT 307 (376)
T ss_pred CCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCceEEEEECCCCCCCc
Confidence 99999999999998767789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHcC
Q 013183 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERVR 425 (448)
Q Consensus 386 ~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~~ 425 (448)
+++|+|+|||..+. ..+|||||+|+|.||+ .+++++++.
T Consensus 308 ~~~i~g~G~p~~~~-~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~ 351 (376)
T PRK14280 308 QFRLKGKGVPNVRG-YGQGDQYVVVRVVTPTKLTDRQKELLREFA 351 (376)
T ss_pred EEEEcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 99999999997643 2479999999999997 555555554
No 17
>PRK14276 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.5e-73 Score=582.25 Aligned_cols=322 Identities=41% Similarity=0.707 Sum_probs=278.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCcccc-C
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS-A 159 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~-~ 159 (448)
..|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|++||+||+++..+...+ .
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~ 81 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA 81 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCC
Confidence 369999999999999999999999999999999997 47789999999999999999999999999987665321100 0
Q ss_pred CCCCCccccCCCCCceecccccccccccchhcccccc-------ccccCCCCcEEEeeeehhhhcccccceeeeceeeeC
Q 013183 160 GDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (448)
Q Consensus 160 ~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~-------~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C 232 (448)
..+.+|.. .+.| +.|.++|+++|++ ....++.|++++|.|||+|+|+|+++++.+.+.+.|
T Consensus 82 ~~~~~~~~-----------~~~~-~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C 149 (380)
T PRK14276 82 GGFGGFDG-----------SGGF-GGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATC 149 (380)
T ss_pred CCCCCccc-----------cccc-cchhhHHHHHhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccC
Confidence 00111110 0011 1244566666652 113468899999999999999999999999999999
Q ss_pred CCCCCCCccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCC
Q 013183 233 DSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304 (448)
Q Consensus 233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~ 304 (448)
+.|+|+|........+|+.|+|+|.+... ..+++|+.|+|+|++++..|..|+|.|++.+.++++|.||||+
T Consensus 150 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~ 229 (380)
T PRK14276 150 HTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGV 229 (380)
T ss_pred CCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCc
Confidence 99999999888888899999999987532 1367999999999999999999999999999999999999999
Q ss_pred CCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCC
Q 013183 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPG 384 (448)
Q Consensus 305 ~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g 384 (448)
++|++|+|+|+|++...+..+|||+|+|+|+||+.|+|+|+||+++++|+|.||++|++++|+|+||++.|+||+++++|
T Consensus 230 ~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~i~v~ip~g~~~g 309 (380)
T PRK14276 230 ETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTG 309 (380)
T ss_pred cCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCcEEEEECCCCCCC
Confidence 99999999999999876677899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC
Q 013183 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 385 ~~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~ 416 (448)
++++|+|+|||..+. ..+|||||+|+|.||+
T Consensus 310 ~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~ 340 (380)
T PRK14276 310 KKFRLRGKGAPKLRG-GGNGDQHVTVNIVTPT 340 (380)
T ss_pred CEEEECCCCcCCCCC-CCCCCEEEEEEEECCC
Confidence 999999999997643 2469999999999998
No 18
>PRK14294 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.9e-73 Score=579.14 Aligned_cols=319 Identities=41% Similarity=0.757 Sum_probs=279.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
..|||+||||+++|+.+|||+|||+||++||||+|+.+++|+++|++|++||+||+||.+|+.||+||+++..+.
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~----- 77 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGT----- 77 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCC-----
Confidence 469999999999999999999999999999999998778899999999999999999999999999987654321
Q ss_pred CCCCccccCCCCCceecccccccccccchhccccc-c--------ccccCCCCcEEEeeeehhhhcccccceeeeceeee
Q 013183 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFE-D--------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (448)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~-~--------~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~ 231 (448)
.+.++ .+|.++| +.|.++|+++|+ + ....+++|++++|.|||+|+|.|+++++.+.+.+.
T Consensus 78 ~~~~~------~~~~~~~-----~~~~d~f~~~fg~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~ 146 (366)
T PRK14294 78 GFSGF------SGFDDIF-----SSFGDIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLET 146 (366)
T ss_pred CCCCc------Cccccch-----hhhhhhHHHhhccCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeeccc
Confidence 00111 0111111 112344444443 1 12346889999999999999999999999999999
Q ss_pred CCCCCCCCccCCCccccCCCccceeEEEeC----CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCCCC
Q 013183 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG 307 (448)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~~G 307 (448)
|+.|+|+|.........|+.|+|.|.+... +++++|+.|+|+|+.++..|..|+|.|++.+.++++|.||||+++|
T Consensus 147 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G 226 (366)
T PRK14294 147 CEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTG 226 (366)
T ss_pred CCCCCCccccCCCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCC
Confidence 999999999888888999999999987532 3578999999999999999999999999999999999999999999
Q ss_pred CEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCCcEE
Q 013183 308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLL 387 (448)
Q Consensus 308 ~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~ 387 (448)
++|+|+|+|++...++.+|||+|+|+++||+.|+|+|+||++++.|+|.||++|++++|+|+||+++|+||+++++|+++
T Consensus 227 ~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~i 306 (366)
T PRK14294 227 SRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIF 306 (366)
T ss_pred cEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEE
Confidence 99999999999877788999999999999999999999999999999999999999999999999899999999999999
Q ss_pred EEcCCCCCCCCCCCCCCcEEEEEEEECCC
Q 013183 388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 388 ~l~g~G~p~~~~~~~~GDL~V~~~V~~P~ 416 (448)
+|+|+|||..+. ..+|||||+|+|.+|+
T Consensus 307 ri~G~G~p~~~~-~~~GDL~V~~~v~~P~ 334 (366)
T PRK14294 307 RFKGKGIPSLRG-GGRGDQIIEVEVKVPT 334 (366)
T ss_pred EECCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence 999999997643 2479999999999997
No 19
>PRK14297 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.4e-73 Score=581.13 Aligned_cols=323 Identities=39% Similarity=0.753 Sum_probs=278.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
..|||++|||+++|+.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|++||++|+.+..+.. + .
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~-~-~ 80 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAG-G-F 80 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccC-C-C
Confidence 3699999999999999999999999999999999987788999999999999999999999999999876543210 0 0
Q ss_pred CCCCccccCCCCCceecccccccccccchhcccccc---------ccccCCCCcEEEeeeehhhhcccccceeeeceeee
Q 013183 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (448)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~---------~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~ 231 (448)
+.++|. .|. +. .+ .+|.++|+.+|++ ....+++|++++|.|||+|+|+|+++++.+.+.+.
T Consensus 81 ~~~~~~------~~~--~~-~~-~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~ 150 (380)
T PRK14297 81 GSGGFG------GFD--FS-DM-GGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNEN 150 (380)
T ss_pred CCCCCC------CcC--cc-cc-cchhHHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeecc
Confidence 001110 010 00 00 1133445554432 11346889999999999999999999999999999
Q ss_pred CCCCCCCCccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCC
Q 013183 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (448)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG 303 (448)
|+.|+|+|........+|+.|+|.|.+... .++++|+.|+|+|.+++..|..|+|.|++.+.++++|.||||
T Consensus 151 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G 230 (380)
T PRK14297 151 CETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAG 230 (380)
T ss_pred CCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCC
Confidence 999999999888888999999999987532 247899999999999999999999999999999999999999
Q ss_pred CCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCC
Q 013183 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQP 383 (448)
Q Consensus 304 ~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~ 383 (448)
+++|++|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||+++++|+|.||++|+++.|+|+||+++|+||+++++
T Consensus 231 ~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~~~v~ip~g~~~ 310 (380)
T PRK14297 231 VDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQP 310 (380)
T ss_pred CCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCcEEEEECCCcCC
Confidence 99999999999999977677899999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC
Q 013183 384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 384 g~~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~ 416 (448)
|++++|+|+|||..+. ..+|||||+|+|+||+
T Consensus 311 g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~ 342 (380)
T PRK14297 311 GTVFRLKGKGVPRVNS-TGRGNQYVTVIVDIPK 342 (380)
T ss_pred CCEEEEcCCCcCCCCC-CCCCcEEEEEEEEcCC
Confidence 9999999999997642 3579999999999997
No 20
>PRK10767 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.8e-73 Score=577.27 Aligned_cols=320 Identities=45% Similarity=0.845 Sum_probs=279.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
..|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||++++.+..... +
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~-~-- 79 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGG-G-- 79 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCC-C--
Confidence 4699999999999999999999999999999999987788999999999999999999999999999876543210 0
Q ss_pred CCCCccccCCCCCceecccccccccccchhcccccc------ccccCCCCcEEEeeeehhhhcccccceeeeceeeeCCC
Q 013183 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (448)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~------~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~~ 234 (448)
..+|. + ..+| ++.|.++|+.+|++ ....+++|++++|+|||+|+|+|+++++.+.+.+.|+.
T Consensus 80 -~~~~~--~-~~~~--------~~~f~~~f~~~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~ 147 (371)
T PRK10767 80 -GGGFG--G-GGGF--------GDIFGDIFGDIFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDT 147 (371)
T ss_pred -CCCCC--C-cccc--------ccchhhhhhhhccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCC
Confidence 01110 0 0011 11233444444432 12357899999999999999999999999999999999
Q ss_pred CCCCCccCCCccccCCCccceeEEEeC----CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCCCCCEE
Q 013183 235 CHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310 (448)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~~G~~i 310 (448)
|+|+|.........|+.|+|+|.+... .++++|+.|.|+|+.++..|..|+|.|++.+.++++|.||||+++|++|
T Consensus 148 C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i 227 (371)
T PRK10767 148 CHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRI 227 (371)
T ss_pred CCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEE
Confidence 999999888888899999999987532 3577999999999999999999999999999999999999999999999
Q ss_pred EECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCCcEEEEc
Q 013183 311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLR 390 (448)
Q Consensus 311 ~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~l~ 390 (448)
+|+|+|++..++..+|||+|+|+++||+.|+|+|+||++++.|++.+|++|++++|+|+||.++|+||+++++|++++|+
T Consensus 228 ~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~ 307 (371)
T PRK10767 228 RLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKLFRLR 307 (371)
T ss_pred EEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEEEEeCCCCCCCCEEEEC
Confidence 99999999776778999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred CCCCCCCCCCCCCCcEEEEEEEECCC
Q 013183 391 GKGLAKNGLFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 391 g~G~p~~~~~~~~GDL~V~~~V~~P~ 416 (448)
|+|||..+. ..+|||||+|+|.+|+
T Consensus 308 g~G~p~~~~-~~~GDL~v~~~v~~P~ 332 (371)
T PRK10767 308 GKGVKSVRS-GARGDLYCQVVVETPV 332 (371)
T ss_pred CCCcCCCCC-CCCCCEEEEEEEECCC
Confidence 999997643 2579999999999997
No 21
>PRK14281 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9e-73 Score=579.20 Aligned_cols=339 Identities=37% Similarity=0.687 Sum_probs=279.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCCC
Q 013183 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (448)
Q Consensus 82 ~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~~ 161 (448)
.|||+||||+++|+.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++++.+........ .
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~~-~ 81 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASG-G 81 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccccC-C
Confidence 599999999999999999999999999999999987788999999999999999999999999999876543211000 0
Q ss_pred CCCccccCCCCCceeccc---cccccc--cc----chhccccccc-------cccCCCCcEEEeeeehhhhcccccceee
Q 013183 162 AEGFRYAGDAEGFRYAYQ---THFSDS--FH----KIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVS 225 (448)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~---~~f~~~--f~----~~Fs~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~i~ 225 (448)
..+|. ++...|.++|. +.|+++ +. .-|...|++. ...+++|+++.|.|||+|+|+|+++++.
T Consensus 82 ~~~~~--~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~ 159 (397)
T PRK14281 82 GPGYG--GGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLK 159 (397)
T ss_pred CCCCC--cCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEE
Confidence 01110 00011222221 112110 00 0011111111 1236889999999999999999999999
Q ss_pred eceeeeCCCCCCCCccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEeeecceeecCCcEEeceEEEE
Q 013183 226 FDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVK 297 (448)
Q Consensus 226 ~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~ 297 (448)
+++.+.|+.|+|+|.... ...+|+.|+|.|.++.. ..+++|+.|+|.|+++++.|..|+|.|++.+.++++
T Consensus 160 ~~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~ 238 (397)
T PRK14281 160 IKKQVPCKECNGTGSKTG-ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVK 238 (397)
T ss_pred EEeeecCCCCCCcccCCC-CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEEE
Confidence 999999999999999876 57899999999986532 136799999999999999999999999999999999
Q ss_pred EEecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEe
Q 013183 298 VTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKI 377 (448)
Q Consensus 298 V~IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~i 377 (448)
|.||||+++|++|+|+|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|+|.||++|++++|+|+||++.|+|
T Consensus 239 V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~i 318 (397)
T PRK14281 239 VTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTI 318 (397)
T ss_pred EecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEEe
Confidence 99999999999999999999987777899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHcC
Q 013183 378 PKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERVR 425 (448)
Q Consensus 378 p~g~~~g~~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~~ 425 (448)
|+++++|++++|+|+|||..+. ..+|||||+|+|.||+ ++++++++.
T Consensus 319 p~g~~~G~~~ri~g~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~ 370 (397)
T PRK14281 319 PAGTQPETMLRIPGKGIGHLRG-SGRGDQYVRVNVFVPKEVSHQDKELLKELK 370 (397)
T ss_pred CCccCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHH
Confidence 9999999999999999997542 2579999999999997 444555543
No 22
>PRK14291 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.7e-72 Score=573.40 Aligned_cols=333 Identities=38% Similarity=0.691 Sum_probs=275.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
..|||++|||+++|+.+|||+|||+||++||||+|++ ++|+++|++|++||+||+||.+|+.||+++..+.........
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~ 80 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ 80 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCccc
Confidence 3699999999999999999999999999999999984 778999999999999999999999999998765432110000
Q ss_pred CCCCccccCCCCCceecccccccc-cccchhccccc--c-----ccccCCCCcEEEeeeehhhhcccccceeeeceeeeC
Q 013183 161 DAEGFRYAGDAEGFRYAYQTHFSD-SFHKIFSEIFE--D-----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (448)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~-~f~~~Fs~~f~--~-----~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C 232 (448)
...+|... ....|.++|.+.|+. +|..+|...++ . ....+++|+++.|.|||+|+|+|+++++.+.+.+.|
T Consensus 81 ~~~~~~~~-~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C 159 (382)
T PRK14291 81 GQEGFSDF-GGGNIEDILEDVFDIFGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPC 159 (382)
T ss_pred cccccccc-cCCCHHHHHHHHHHhccccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeeccC
Confidence 00111100 001122222221100 01111111000 0 112368899999999999999999999999999999
Q ss_pred CCCCCCCccCCCccccCCCccceeEEEeC----CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCCCCC
Q 013183 233 DSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308 (448)
Q Consensus 233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~~G~ 308 (448)
+.|+|+|.........|+.|+|+|.+... .++++|+.|+|.|. ++..|..|+|.|++.+.++++|.||||+.+|+
T Consensus 160 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~-~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~ 238 (382)
T PRK14291 160 EACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGV-LREPCSKCNGRGLVIKKETIKVRIPPGVDNGS 238 (382)
T ss_pred CCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceE-EccCCCCCCCCceEEeeeEEEEEeCCCCCCCC
Confidence 99999999888888999999999987543 34789999999995 78999999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCe-EEEEeCCCCCCCcEE
Q 013183 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLL 387 (448)
Q Consensus 309 ~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~ 387 (448)
+|+|+|+|+++..++.+|||||+|+++||+.|+|+|+||++++.|+|.||++|+++.|+|+||+ ++|+||+++++|+++
T Consensus 239 ~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G~~i 318 (382)
T PRK14291 239 KLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGDKI 318 (382)
T ss_pred EEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCCCEE
Confidence 9999999999877888999999999999999999999999999999999999999999999996 899999999999999
Q ss_pred EEcCCCCCCCCCCCCCCcEEEEEEEECCCh
Q 013183 388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPTW 417 (448)
Q Consensus 388 ~l~g~G~p~~~~~~~~GDL~V~~~V~~P~~ 417 (448)
+|+|+|||..+. ..+|||||+|+|+||+.
T Consensus 319 ~i~G~G~p~~~~-~~~GDL~V~~~V~~P~~ 347 (382)
T PRK14291 319 RVPGKGMPRLKG-SGYGDLVVRVHIDVPKI 347 (382)
T ss_pred EECCCCCCCCCC-CCCCCEEEEEEEEeCCC
Confidence 999999997643 25799999999999973
No 23
>PRK14300 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2e-71 Score=565.11 Aligned_cols=332 Identities=36% Similarity=0.696 Sum_probs=280.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCCC
Q 013183 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (448)
Q Consensus 82 ~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~~ 161 (448)
.|||+||||+++||.+|||+|||+||++||||+++ ++.++++|++|++||++|+||.+|+.||++|+++....... +.
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~-~~ 80 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSR-GG 80 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhcccccccccccc-CC
Confidence 59999999999999999999999999999999997 46788999999999999999999999999987654321000 00
Q ss_pred CCCccccCCCCCceecccccccccccchhccccccc-------cccCCCCcEEEeeeehhhhcccccceeeeceeeeCCC
Q 013183 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (448)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~~ 234 (448)
..++ .+|. ..|.+.|.++|+.+|++. ...+++|+++.|.|||+|+|+|+++++.+.+.+.|+.
T Consensus 81 ~g~~------~~~~----~~~~~~f~~~f~~~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~ 150 (372)
T PRK14300 81 GGNH------GGFH----PDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDT 150 (372)
T ss_pred CCCC------Cccc----cchhhhHHHHHHhhcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCC
Confidence 0000 0010 001112233343333321 1146889999999999999999999999999999999
Q ss_pred CCCCCccCCCccccCCCccceeEEEeC----CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCCCCCEE
Q 013183 235 CHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310 (448)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~~G~~i 310 (448)
|+|+|........+|+.|+|+|.+... .++.+|+.|+|.|++++..|.+|+|.|++.+.++++|.||||+++|++|
T Consensus 151 C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i 230 (372)
T PRK14300 151 CHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRI 230 (372)
T ss_pred CCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEE
Confidence 999999888888999999999987543 2477999999999999999999999999999999999999999999999
Q ss_pred EECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCC-eEEEEeCCCCCCCcEEEE
Q 013183 311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLVL 389 (448)
Q Consensus 311 ~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG-~~~v~ip~g~~~g~~~~l 389 (448)
+|+|+|++...+..+|||+|+|+++||+.|+|+|+||++++.|++.+|++|+++.|+|+|| .++|+||+++++|++++|
T Consensus 231 ~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri 310 (372)
T PRK14300 231 RHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRL 310 (372)
T ss_pred EEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEE
Confidence 9999999977778899999999999999999999999999999999999999999999998 589999999999999999
Q ss_pred cCCCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHcCC
Q 013183 390 RGKGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERVRA 426 (448)
Q Consensus 390 ~g~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~~~ 426 (448)
+|+|||..+. ..+|||||+|+|+||+ ++++++++.+
T Consensus 311 ~g~G~p~~~~-~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~~ 351 (372)
T PRK14300 311 RSKGMSKMRS-TIRGDMLTHIHVEVPKNLSKRQRELLEEFKK 351 (372)
T ss_pred CCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9999997532 2479999999999997 5555555543
No 24
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=100.00 E-value=3.1e-71 Score=561.76 Aligned_cols=320 Identities=44% Similarity=0.795 Sum_probs=276.0
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCCCC
Q 013183 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDA 162 (448)
Q Consensus 83 ~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~~~ 162 (448)
|||++|||+++|+.+|||+|||+||++||||+++ +++++++|++|++||+||+||.+|+.||+++..+....... ..
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~--~~ 77 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGG--GG 77 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcC--CC
Confidence 7999999999999999999999999999999997 57788999999999999999999999999987654321100 00
Q ss_pred CCccccCCCCCceecccccccccccchhcccccc---------ccccCCCCcEEEeeeehhhhcccccceeeeceeeeCC
Q 013183 163 EGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (448)
Q Consensus 163 ~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~---------~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~ 233 (448)
.+|. +|. .+.| +.|.++|+.+|++ ....+++|++++|.|||+|+|+|+++++.+++.+.|+
T Consensus 78 ~~~~------~~~---~~~~-~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~ 147 (354)
T TIGR02349 78 GGFN------GFD---IGFF-GDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCE 147 (354)
T ss_pred CCcC------Ccc---ccCc-CchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCC
Confidence 0110 000 0001 1133455555542 1234688999999999999999999999999999999
Q ss_pred CCCCCCccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCC
Q 013183 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (448)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~ 305 (448)
.|+|+|.........|+.|+|.|.++.. +.+++|+.|.|+|+.++..|..|+|.|++.+.++++|.||||++
T Consensus 148 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 227 (354)
T TIGR02349 148 TCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVD 227 (354)
T ss_pred CCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCC
Confidence 9999999888778999999999986532 23679999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCCc
Q 013183 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ 385 (448)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g~ 385 (448)
+|++|+|+|+|++...+..+|||+|+|++++|+.|+|+|+||++++.|+|.||++|+++.|+|+||.++|+||+++++|+
T Consensus 228 ~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~ 307 (354)
T TIGR02349 228 TGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGT 307 (354)
T ss_pred CCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCceEEEEECCcccCCc
Confidence 99999999999987667789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEEEEECCC
Q 013183 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 386 ~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~ 416 (448)
+++|+|+|||..+. ..+|||||+|+|.||+
T Consensus 308 ~~~i~g~G~p~~~~-~~~GDL~i~~~v~~P~ 337 (354)
T TIGR02349 308 VFRLKGKGVPRLRG-NGRGDLLVTVKVETPK 337 (354)
T ss_pred EEEECCCCcCCCCC-CCCCCEEEEEEEECCC
Confidence 99999999997643 2579999999999997
No 25
>PRK14283 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.5e-71 Score=562.38 Aligned_cols=333 Identities=38% Similarity=0.698 Sum_probs=280.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
..|||++|||+++|+.+|||+|||+||++||||+|++ ++|+++|++|++||+||+||.+|++||++|++|..+. +..
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~--~~~ 80 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGF--SQE 80 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccc--ccc
Confidence 5799999999999999999999999999999999984 7899999999999999999999999999987664321 000
Q ss_pred CCCCccccCCCCCceecccccccccccchhccc-ccc---ccccCCCCcEEEeeeehhhhcccccceeeeceeeeCCCCC
Q 013183 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEI-FED---ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCH 236 (448)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~-f~~---~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~~C~ 236 (448)
+.|. . ..+.+.|.. |..+|.++|+.+ |++ ....++.|++++|.|||+|+|+|+++++.+.+.+.|+.|+
T Consensus 81 --~~~~--~--~~~~~~~~~-~~~~~~~~f~~~~fgg~~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~ 153 (378)
T PRK14283 81 --DIFN--N--INFEDIFQG-FGFGIGNIFDMFGFGGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCN 153 (378)
T ss_pred --cccc--c--cCccccccc-cccchhhhccccccCCCCCCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCC
Confidence 0010 0 011111111 111123344433 332 1234788999999999999999999999999999999999
Q ss_pred CCCccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCCCCC
Q 013183 237 GRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308 (448)
Q Consensus 237 G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~~G~ 308 (448)
|+|.........|+.|+|.|.+... ..+.+|+.|.|.|+.++..|..|+|.|++.+.++++|.||||+++|+
T Consensus 154 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~ 233 (378)
T PRK14283 154 GSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGS 233 (378)
T ss_pred ccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCCc
Confidence 9999888888899999999997532 13679999999999999999999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCCcEEE
Q 013183 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLV 388 (448)
Q Consensus 309 ~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~ 388 (448)
+|+|+|+|++...+..+|||+|+|+|++|+.|+|+|+||++++.|+|.+|++|+++.|+|+||.+.|+||+++++|++++
T Consensus 234 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~r 313 (378)
T PRK14283 234 RLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTFR 313 (378)
T ss_pred EEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEEE
Confidence 99999999997767789999999999999999999999999999999999999999999999998999999999999999
Q ss_pred EcCCCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHc
Q 013183 389 LRGKGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERV 424 (448)
Q Consensus 389 l~g~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~ 424 (448)
|+|+|||..+. ..+|||||+|+|+||+ ++++++++
T Consensus 314 i~g~G~p~~~~-~~~GdL~v~~~v~~P~~l~~~q~~ll~~~ 353 (378)
T PRK14283 314 LKGHGMPSLRW-SGKGNLYVKVKVVVPKKLSPKQKELLREF 353 (378)
T ss_pred ECCCCCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHH
Confidence 99999997542 2479999999999997 44444444
No 26
>PRK14290 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.9e-70 Score=554.01 Aligned_cols=327 Identities=36% Similarity=0.638 Sum_probs=270.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 82 ~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
.|||++|||+++|+.+|||+|||+||++||||+++.++ +|+++|++|++||+||+||.+|++||++|+.+..+. .+..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~-~~~~ 81 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAG-GSNF 81 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccC-CCCc
Confidence 59999999999999999999999999999999998664 789999999999999999999999999987654310 0000
Q ss_pred CCCCccccCCCCCceeccccccccccc-chhccc-cccccccCCCCcEEEeeeehhhhcccccceeeeceeeeCCCCCCC
Q 013183 161 DAEGFRYAGDAEGFRYAYQTHFSDSFH-KIFSEI-FEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGR 238 (448)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~-~~Fs~~-f~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~~C~G~ 238 (448)
.+.+|. ....|.++|.+.|++.+. +.|+.. .......+++|++++|.|||+|+|+|+++++.+.+.+.|+.|+|+
T Consensus 82 ~~~~~~---~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~ 158 (365)
T PRK14290 82 NWDNFT---HFSDINDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGT 158 (365)
T ss_pred cccccc---cccchhHHHHHHhcCccccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCccc
Confidence 000110 001122223222221100 001000 000111247899999999999999999999999999999999999
Q ss_pred CccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCCCCCEE
Q 013183 239 GFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310 (448)
Q Consensus 239 G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~~G~~i 310 (448)
|.... ...+|+.|+|.|++++. +++.+|+.|.|.|+.++..|..|+|.|++.+.++++|.||||+.+|++|
T Consensus 159 g~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i 237 (365)
T PRK14290 159 GAKNG-KLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRL 237 (365)
T ss_pred cCCCC-CCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEE
Confidence 98765 57899999999986532 1357999999999999999999999999999999999999999999999
Q ss_pred EECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCCcEEEEc
Q 013183 311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLR 390 (448)
Q Consensus 311 ~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~l~ 390 (448)
+|+|+|+. .++.+|||||+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|++|.++|+||+++++|++++|+
T Consensus 238 ~~~g~G~~--~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip~g~~~g~~iri~ 315 (365)
T PRK14290 238 RVKGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVLKIK 315 (365)
T ss_pred EEccccCC--CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEECCccCCCcEEEEC
Confidence 99999986 4678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcEEEEEEEECCC
Q 013183 391 GKGLAKNGLFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 391 g~G~p~~~~~~~~GDL~V~~~V~~P~ 416 (448)
|+|||..+. ..+|||||+|+|.+|+
T Consensus 316 g~G~p~~~~-~~~GDL~V~~~V~~P~ 340 (365)
T PRK14290 316 GAGMPHLNG-HGSGDLLVRINVEVPK 340 (365)
T ss_pred CCCCCCCCC-CCCCCEEEEEEEECCC
Confidence 999997643 2479999999999997
No 27
>PRK14289 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.7e-69 Score=554.17 Aligned_cols=342 Identities=37% Similarity=0.634 Sum_probs=281.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
..|||++|||+++|+.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|++||++++.+..+.. +.+
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~-~~~ 82 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAA-GGG 82 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCC-CCC
Confidence 4699999999999999999999999999999999998888999999999999999999999999999876543210 000
Q ss_pred CCCCccccCCCCCce---ecccccccccccch--hccccccccccCCCCcEEEeeeehhhhcccccceeeeceeeeCCCC
Q 013183 161 DAEGFRYAGDAEGFR---YAYQTHFSDSFHKI--FSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSC 235 (448)
Q Consensus 161 ~~~~~~~~~~~~~f~---~~~~~~f~~~f~~~--Fs~~f~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~~C 235 (448)
.+.+..+ +..+.|. ++|++.|++ +... |..........++.|+++.+.|||+|+|+|+++++.+.+.+.|+.|
T Consensus 83 ~~~~~~~-~~~~~f~~f~~~fg~~~gg-~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C 160 (386)
T PRK14289 83 GFSGEGM-SMEDIFSMFGDIFGGHGGG-FGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHC 160 (386)
T ss_pred CCCCCCc-ChhhhhHHhhhhhcccccC-cccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCC
Confidence 0100000 0011111 112211110 0000 0000000123468899999999999999999999999999999999
Q ss_pred CCCCccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCCCC
Q 013183 236 HGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG 307 (448)
Q Consensus 236 ~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~~G 307 (448)
+|+|.........|+.|+|.|.++.. .++.+|+.|+|.|++++..|..|.|.|++.+.++++|.||||+++|
T Consensus 161 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G 240 (386)
T PRK14289 161 HGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEG 240 (386)
T ss_pred CCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCC
Confidence 99999888888999999999997542 2367999999999999999999999999999999999999999999
Q ss_pred CEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCCcEE
Q 013183 308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLL 387 (448)
Q Consensus 308 ~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~ 387 (448)
++|+|+|+|++...+..+|||+|+|++++|+.|+|+|+||++++.|+|.+|++|+++.|+|+||+++|+||+++++|+++
T Consensus 241 ~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~~~ 320 (386)
T PRK14289 241 MQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGKAKVKIEAGTQPGKVL 320 (386)
T ss_pred CEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCceEEEEECCccCCCcEE
Confidence 99999999998766778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHcCC
Q 013183 388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERVRA 426 (448)
Q Consensus 388 ~l~g~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~~~ 426 (448)
+|+|+|||..+. ..+|||||+|+|+||+ ++++++++.+
T Consensus 321 ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~~ 363 (386)
T PRK14289 321 RLRNKGLPSVNG-YGTGDLLVNVSVYIPETLSKEEKQTLEKMEN 363 (386)
T ss_pred EECCCCcCCCCC-CCCCcEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence 999999997543 2579999999999997 5555555443
No 28
>PRK14293 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.5e-69 Score=550.44 Aligned_cols=325 Identities=39% Similarity=0.722 Sum_probs=273.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCCC
Q 013183 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (448)
Q Consensus 82 ~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~~ 161 (448)
.|||+||||+++|+.+|||+|||+||++||||+|+ ++.++++|++|++||+||+||.+|+.||.+++.+..+. . .
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~---~-~ 77 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGA---A-G 77 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccC---C-C
Confidence 59999999999999999999999999999999997 46789999999999999999999999999987654311 0 0
Q ss_pred CCCccccCCCCCceecccccccccccchhcc---ccccccccCCCCcEEEeeeehhhhcccccceeeeceeeeCCCCCCC
Q 013183 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSE---IFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGR 238 (448)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~---~f~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~~C~G~ 238 (448)
+.++ ++...|.++|.+.|++ |.. .+. ........+++|++++|.|||+|+|+|+++++.+++.+.|+.|+|+
T Consensus 78 ~~~~---~~~~~~~d~f~~~fg~-~~~-~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~ 152 (374)
T PRK14293 78 FPDM---GDMGGFADIFETFFSG-FGG-AGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGS 152 (374)
T ss_pred cCCc---ccccchHHHHHHHhcc-cCC-CCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCc
Confidence 0000 0001122222221210 000 000 0000123467899999999999999999999999999999999999
Q ss_pred CccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCCCCCEE
Q 013183 239 GFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310 (448)
Q Consensus 239 G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~~G~~i 310 (448)
|.........|+.|+|.|.+... ..+++|+.|.|.|+.++..|.+|.|.|++.+.++++|.||||+++|++|
T Consensus 153 G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i 232 (374)
T PRK14293 153 GAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRL 232 (374)
T ss_pred CCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEE
Confidence 99888888899999999986532 1367999999999999999999999999999999999999999999999
Q ss_pred EECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCCcEEEEc
Q 013183 311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLR 390 (448)
Q Consensus 311 ~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~l~ 390 (448)
+|+|+|++...+..+|||+|+|++++|+.|+|+|+||+++++|++.||++|+++.|+|+||+++|+||+++++|++++|+
T Consensus 233 ~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~~~~g~~~ri~ 312 (374)
T PRK14293 233 RVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVLTLE 312 (374)
T ss_pred EEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCCCCCCCEEEEC
Confidence 99999998766677899999999999999999999999999999999999999999999999899999999999999999
Q ss_pred CCCCCCCCCCCCCCcEEEEEEEECCC
Q 013183 391 GKGLAKNGLFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 391 g~G~p~~~~~~~~GDL~V~~~V~~P~ 416 (448)
|+|||..+..+.+|||||+|+|+||+
T Consensus 313 g~G~p~~~~~~~~GDL~v~~~v~~P~ 338 (374)
T PRK14293 313 NKGVPRLGNPVARGDHLITVKVKIPT 338 (374)
T ss_pred CCCCCCCCCCCCcCCEEEEEEEECCC
Confidence 99999764434579999999999997
No 29
>PRK14292 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.2e-67 Score=538.29 Aligned_cols=331 Identities=34% Similarity=0.605 Sum_probs=272.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCCC
Q 013183 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (448)
Q Consensus 82 ~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~~ 161 (448)
.|||++|||+++|+.+|||+|||+||++||||+++ +++|+++|++|++||+||+||.+|+.||++|+.+..+. .+.++
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~-~~~~~ 79 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGM-PGGDP 79 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccc-cCCcc
Confidence 49999999999999999999999999999999997 57789999999999999999999999999987652110 00000
Q ss_pred CCCccccCCCCCceecccccccccccchhccccccccccCCCCcEEEeeeehhhhcccccceeeeceeeeCCCCCCCCcc
Q 013183 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFP 241 (448)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~~C~G~G~~ 241 (448)
+.++.+ .+.++|.+.|++.. +...++.....++.|+++++.|||+|+|+|+++++.+.+.+.|+.|+|+|..
T Consensus 80 ~~~~~~-----d~~d~f~~~fg~~~---~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~ 151 (371)
T PRK14292 80 FGGMGF-----DPMDIFEQLFGGAG---FGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTE 151 (371)
T ss_pred cCccCC-----ChHHHHHHhhCCCC---cCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccC
Confidence 111100 01122222221100 0000000123468899999999999999999999999999999999999987
Q ss_pred CCC-ccccCCCccceeEEEeC--------CccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCCCCCEEEE
Q 013183 242 ADA-KTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRV 312 (448)
Q Consensus 242 ~~~-~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~~G~~i~~ 312 (448)
... ...+|+.|+|+|.+... ..+.+|+.|+|.|..++..|..|.|.|++.+.++++|.||||+++|++|+|
T Consensus 152 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~ 231 (371)
T PRK14292 152 PGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRV 231 (371)
T ss_pred CCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEE
Confidence 654 36899999999987532 136799999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCCcEEEEcCC
Q 013183 313 PEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGK 392 (448)
Q Consensus 313 ~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~l~g~ 392 (448)
+|+|++.+.+ . |||||+|++++|+.|+|+|+||++++.|++.||++|+++.|+|+||+..|+||+++++|++++|+|+
T Consensus 232 ~G~G~~~~~~-~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~i~g~ 309 (371)
T PRK14292 232 AGMGNEGPGG-N-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQHGDLHRLRGQ 309 (371)
T ss_pred ecCcCCCCCC-C-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCEEEecCCCcCCCcEEEECCC
Confidence 9999997544 3 9999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred CCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHcC
Q 013183 393 GLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERVR 425 (448)
Q Consensus 393 G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~~ 425 (448)
|||..+. ..+|||||+|+|++|+ .++|++++.
T Consensus 310 G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~ 346 (371)
T PRK14292 310 GMPRLQG-AGTGDLIVEYEIAVPKQLSPEAREALEAYA 346 (371)
T ss_pred CCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 9997533 2469999999999997 455555543
No 30
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.8e-65 Score=499.72 Aligned_cols=308 Identities=32% Similarity=0.579 Sum_probs=270.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
...||+||||+++||.+|||+|||+||++||||||++ +.++|++|++||||||||+||.+||+||+++.++..++
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~-- 77 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGG-- 77 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCC--
Confidence 3589999999999999999999999999999999975 68999999999999999999999999998776432111
Q ss_pred CCCCccccCCCCCceecccccccccccchhccccccccccCCCCcEEEeeeehhhhcccccceeeeceeeeCCCCCCCCc
Q 013183 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGF 240 (448)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~~C~G~G~ 240 (448)
+++ ..|+.||+ | ...+.+...+++|+.+.++|+|+|+|.|.+..+.++++.+|+.|+|.|.
T Consensus 78 --~g~------~~f~~~F~--~---------g~~~~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGg 138 (337)
T KOG0712|consen 78 --GGF------GGFSQFFG--F---------GGNGGRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGG 138 (337)
T ss_pred --CCC------ccHHHhcc--C---------CCcCccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCC
Confidence 111 11444443 1 0112234456999999999999999999999999999999999999999
Q ss_pred cCCCccccCCCccceeEEEe---------CCccccCCCcCCceEE--eeecceeecCCcEEeceEEEEEEecCCCCCCCE
Q 013183 241 PADAKTKICSTCRGIGRVTI---------PPFTSTCSTCKGLGRI--IKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309 (448)
Q Consensus 241 ~~~~~~~~C~~C~G~G~~~~---------~~~~~~C~~C~G~G~~--~~~~C~~C~g~G~~~~~~~l~V~IppG~~~G~~ 309 (448)
..... ..|+.|.|+|..+. ++++.+|..|+|.|.+ .++.|+.|.|.++++..+.++|.|+||+.++++
T Consensus 139 ksg~~-~~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~k 217 (337)
T KOG0712|consen 139 KSGSA-PKCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQK 217 (337)
T ss_pred CCCCC-CCCCCCCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccce
Confidence 87654 38999999998542 2457899999999998 578999999999999999999999999999999
Q ss_pred EEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCe-EEEEeCCC--CCCCcE
Q 013183 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQL 386 (448)
Q Consensus 310 i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~-~~v~ip~g--~~~g~~ 386 (448)
|.+.|++++.+ +..+||+++.|..++|+.|.|.|+||++..+|++.||++|+.+.+.|+||+ +.+.++|+ +.||++
T Consensus 218 i~f~geadea~-g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~ 296 (337)
T KOG0712|consen 218 ITFKGEADEAP-GTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDT 296 (337)
T ss_pred eeeeeeeeecC-CCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHE
Confidence 99999999875 566999999999999999999999999999999999999999999999998 78888887 899999
Q ss_pred EEEcCCCCCCCCCCCCCCcEEEEEEEECCC
Q 013183 387 LVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 387 ~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~ 416 (448)
++|+|+|||+.+++ +|||||+|+|+||+
T Consensus 297 ~~v~~~gmp~~~~~--~g~lyi~~~v~fp~ 324 (337)
T KOG0712|consen 297 KRVEGEGMPIFRNP--KGDLYIKFEVKFPK 324 (337)
T ss_pred EeecCCCcccccCC--CCcEEEEEEEEcCC
Confidence 99999999998765 89999999999999
No 31
>PRK14299 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7e-56 Score=437.30 Aligned_cols=271 Identities=37% Similarity=0.635 Sum_probs=212.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccC-
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA- 159 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~- 159 (448)
..|||+||||+++||.+|||+|||+||++||||+|+ ++.++++|++|++||++|+||.+|+.||+++.++......+.
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~ 81 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPP 81 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCC
Confidence 469999999999999999999999999999999997 578899999999999999999999999999876432110000
Q ss_pred ---CCCCCccccCCCCCceecccccccc-----cccchhccccccccccCCCCcEEEeeeehhhhcccccceeeeceeee
Q 013183 160 ---GDAEGFRYAGDAEGFRYAYQTHFSD-----SFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (448)
Q Consensus 160 ---~~~~~~~~~~~~~~f~~~~~~~f~~-----~f~~~Fs~~f~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~ 231 (448)
....+|. ......|+++|.+.|++ ++.++|.. ++ ....++.|+++++.|||+|+|.|+++.+.+.
T Consensus 82 ~~~~~~~~~~-~~~~~~~~d~f~~~fgg~~~~~~~g~~~~~-~~-~~~~~g~dl~~~l~isL~ea~~G~~~~i~l~---- 154 (291)
T PRK14299 82 PGPPGGGDFS-GFNVGDFSDFFQQLFGGRGGFGGFGDLFGS-VG-RRARKGRDLEAELPLTLEEAYRGGEKVVEVA---- 154 (291)
T ss_pred CCCCCCCCcc-ccCcCCHHHHHHHHhCCCCCCCCccccccc-cc-CCCCCCCCEEEEEEecHHHHhCCCeEEEeeC----
Confidence 0001110 00001233333332221 00001100 00 1134688999999999999999999887541
Q ss_pred CCCCCCCCccCCCccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCCCCCEEE
Q 013183 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311 (448)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~~G~~i~ 311 (448)
.++++|.||||+++|++|+
T Consensus 155 -------------------------------------------------------------g~~~~V~Ip~G~~~G~~ir 173 (291)
T PRK14299 155 -------------------------------------------------------------GERLSVRIPPGVREGQVIR 173 (291)
T ss_pred -------------------------------------------------------------CEEEEEecCCCcCCCcEEE
Confidence 1468999999999999999
Q ss_pred ECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCCcEEEEcC
Q 013183 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRG 391 (448)
Q Consensus 312 ~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~l~g 391 (448)
|+|+|++. |||+|+|++++|+.|+|+|+||+++++|++.+|++|+++.|+|+||.++|+||+++++|++++|+|
T Consensus 174 ~~g~G~~~------GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~~~v~ip~~~~~g~~~rl~g 247 (291)
T PRK14299 174 LAGKGRQG------GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGPVEVTIPPRTQAGRKLRLKG 247 (291)
T ss_pred ECCCCCCC------CCEEEEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCCEEEEeCCCcCCCCEEEECC
Confidence 99999863 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcEEEEEEEECCC-----hHHHHHHcCChh
Q 013183 392 KGLAKNGLFLDHGDQYVRFRVNFPT-----WQRIVERVRAPK 428 (448)
Q Consensus 392 ~G~p~~~~~~~~GDL~V~~~V~~P~-----~~~l~~~~~~~~ 428 (448)
+|||..+ +.+|||||+|+|.+|+ .+++++++.+..
T Consensus 248 ~G~p~~~--~~~GDL~v~~~V~~P~~l~~~~~~~l~~l~~~~ 287 (291)
T PRK14299 248 KGWPRGP--AGRGDQYAEVRITIPTRPTPEEERLYKQLAELY 287 (291)
T ss_pred CCCCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhh
Confidence 9999643 3579999999999998 455555554443
No 32
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=100.00 E-value=6.4e-54 Score=426.43 Aligned_cols=268 Identities=32% Similarity=0.599 Sum_probs=215.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~ 160 (448)
..|||++|||+++|+.+|||+|||+||++||||+++ ++.++++|++|++||++|+||.+|+.||.++..+.... ++..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~-~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~-~~~~ 80 (306)
T PRK10266 3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQ-FNRQ 80 (306)
T ss_pred cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCcc-cccc
Confidence 369999999999999999999999999999999987 46789999999999999999999999999864321100 0000
Q ss_pred CCCCccccCCCCCceecccccccccccchhcccccc-------ccccCCCCcEEEeeeehhhhcccccceeeeceeeeCC
Q 013183 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (448)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~-------~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~ 233 (448)
. .+ . .+..|. + ..|.++|+.+|++ ....++.|+.+++.|+|+|+|.|+.+++.+.+.+
T Consensus 81 ~--~~--~-~~~~~~------~-~~~~~~f~~~~g~~~~~~~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~--- 145 (306)
T PRK10266 81 F--QH--G-DGQSFN------A-EDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPV--- 145 (306)
T ss_pred c--cc--C-CCCCCC------C-CCHHHHHHHHhCCCCCCCCCCCCCCCCceEEEEEEEHHHhcCCceEEEEEeccc---
Confidence 0 00 0 000000 0 1133444444442 1234678999999999999999999999886532
Q ss_pred CCCCCCccCCCccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCCCCCEEEEC
Q 013183 234 SCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVP 313 (448)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~~G~~i~~~ 313 (448)
|.| .|.+. ....++++|.||||+++|++|+++
T Consensus 146 -~~g-----------------~G~~~------------------------------~~~~~~~~V~Ip~G~~~G~~i~~~ 177 (306)
T PRK10266 146 -YNA-----------------FGMIE------------------------------QEIPKTLNVKIPAGVGNGQRIRLK 177 (306)
T ss_pred -ccC-----------------CCeEE------------------------------EeeeEEEEEEECCCCcCCcEEEEe
Confidence 211 22110 012358999999999999999999
Q ss_pred CCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCeEEEEeCCCCCCCcEEEEcCCC
Q 013183 314 EAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKG 393 (448)
Q Consensus 314 g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~l~g~G 393 (448)
|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|++.+|++|+++.|+|++|++.|+||+++++|++++|+|+|
T Consensus 178 g~G~~~~~~~~~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~v~v~ip~g~~~g~~~ri~g~G 257 (306)
T PRK10266 178 GQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKG 257 (306)
T ss_pred cCCcCCCCCCCCccEEEEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCccEEEEeCCCcCCCCEEEECCCC
Confidence 99999776778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcEEEEEEEECCC
Q 013183 394 LAKNGLFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 394 ~p~~~~~~~~GDL~V~~~V~~P~ 416 (448)
||..+ .+|||||+|+|.+|+
T Consensus 258 ~p~~~---~~GdL~v~~~v~~P~ 277 (306)
T PRK10266 258 LVSKK---QTGDLYAVLKIVMPP 277 (306)
T ss_pred CCCCC---CCCCEEEEEEEECCC
Confidence 99754 369999999999997
No 33
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-42 Score=334.77 Aligned_cols=309 Identities=30% Similarity=0.415 Sum_probs=236.4
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCcccc
Q 013183 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS 158 (448)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~ 158 (448)
...+|||+||||+++|+.+|||+|||+||++||||||+++|.|.++|++|+.||||||||.+|+.||++|++|.+...
T Consensus 13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~-- 90 (336)
T KOG0713|consen 13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDEN-- 90 (336)
T ss_pred hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccc--
Confidence 345799999999999999999999999999999999999999999999999999999999999999999988776421
Q ss_pred CCCCCCccccCCCCCceecccccccccccchhccccccccccCCCCcEEEeeeehhhhcccccceeeeceeeeCCCCCCC
Q 013183 159 AGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGR 238 (448)
Q Consensus 159 ~~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~~C~G~ 238 (448)
...++- .++.++|+.+|+.. .--|+.....+...+|.++...++.+++++|.|...+....+.+.|. |.|+
T Consensus 91 -~~~~~g--~~~~~~f~~~f~df-----g~~~~g~~~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~-~~g~ 161 (336)
T KOG0713|consen 91 -KDGEGG--GGGNDIFSAFFGDF-----GVTVGGNPLEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKP-APGT 161 (336)
T ss_pred -cccccC--CcccchHHHhhccc-----ccccCCCcccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceee-cCcc
Confidence 001100 00124555544321 11112222223467789999999999999999987766655544432 1221
Q ss_pred CccCCCccccCCCccceeEEEeCCccccCCCcCCceEEe-eecceeecCCcEEeceEEEEEEecCCCCCCCEEEECCCCC
Q 013183 239 GFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII-KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGN 317 (448)
Q Consensus 239 G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~-~~~C~~C~g~G~~~~~~~l~V~IppG~~~G~~i~~~g~G~ 317 (448)
- .-.|. - ....+..|.|....+ ...|.+|.+.+...+..+.++.+..|+..|....+..+|.
T Consensus 162 ~------~~~~~-----~------~~~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (336)
T KOG0713|consen 162 R------KCNCR-----L------EMFTQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELEGE 224 (336)
T ss_pred c------ccCCh-----h------hheeeccCCChhhhhhhhhhccCCccceeecCCceeeeeeecccCCceeeeeccCC
Confidence 1 00110 0 111223333333332 4567777777888889999999999999999999999998
Q ss_pred CCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCCCCe-EEEEeCCCCCCCcEEEEcCCCCCC
Q 013183 318 AGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAK 396 (448)
Q Consensus 318 ~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~l~g~G~p~ 396 (448)
+.. -+.+||+++.+..-+|+.|.|+++|+++++.+++.+++.|+..++.++|+. +.+..-.+..|+..++.+++|||.
T Consensus 225 ~h~-~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~~~~~~~~~~ 303 (336)
T KOG0713|consen 225 PHI-DGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKITWPGARTRKKGEGMPL 303 (336)
T ss_pred cce-ecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhccccchhhhhhhccchh
Confidence 754 457999999999999999999999999999999999999999999999997 566666778899999999999996
Q ss_pred CCCCCCCCcEEEEEEEECCC
Q 013183 397 NGLFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 397 ~~~~~~~GDL~V~~~V~~P~ 416 (448)
-......|+++++|.+.+|.
T Consensus 304 l~~~~~~~~~~~t~~~~~~~ 323 (336)
T KOG0713|consen 304 LKNRNEKGNLYVTFDVEFPK 323 (336)
T ss_pred hhccchhcceeEEecccCcc
Confidence 64444679999999999996
No 34
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=100.00 E-value=8.2e-40 Score=343.21 Aligned_cols=121 Identities=20% Similarity=0.284 Sum_probs=111.6
Q ss_pred EeceEEEEEEecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHHHhcCCEEEEeCC
Q 013183 290 VDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL 369 (448)
Q Consensus 290 ~~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tl 369 (448)
+.+.++++|.||||+++|++|+|+|+|+.++. + +|||||+|+++||+.|+|+|+||++++.|+|.+||+|+++.|+||
T Consensus 693 vkE~ktLeVkIPpGVkdGqkIRf~GeGDegpg-g-~GDLyVvIkVKPHp~FrRdGdDL~~~v~ISL~EALLGgtIeIpTL 770 (871)
T TIGR03835 693 TNEAITLEIQLPITSQLNISAIFKGFGHDFGN-G-CGDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGP 770 (871)
T ss_pred eeeeEEEEEecCCCCCCCCEEEeccccCCCCC-C-CCCEEEEEEEcCCCCeEEECCeEEEEEecCHHHHhcCCEEEeeCC
Confidence 45678999999999999999999999998643 3 499999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEEC
Q 013183 370 SGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNF 414 (448)
Q Consensus 370 dG~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~GDL~V~~~V~~ 414 (448)
||++.|+||+++++|+++||+|+|||..+ +.+|||||+|+|.-
T Consensus 771 DGrVkLkIPpgTqpGqvLRIkGKGMP~~~--~~RGDLyV~f~V~~ 813 (871)
T TIGR03835 771 NKLFNVRIPGGIKVNDQVIFKDLGLTKTK--YDKGSLIVHLYYSS 813 (871)
T ss_pred CCCEEEeeCCCCCCCcEEEECCCCCCCCC--CCCCCEEEEEEEee
Confidence 99999999999999999999999999643 34799999999974
No 35
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-39 Score=318.99 Aligned_cols=240 Identities=43% Similarity=0.777 Sum_probs=204.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccCCC
Q 013183 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (448)
Q Consensus 82 ~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~~~ 161 (448)
.|||+||||+++|+..|||+||++|||+||||.|.+ ++|.++|++|.+|||||+|+++|.+||.++..+. .+
T Consensus 43 ~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~-~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~-------~~ 114 (288)
T KOG0715|consen 43 EDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD-KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQH-------GE 114 (288)
T ss_pred cchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcc-------cc
Confidence 399999999999999999999999999999999986 5899999999999999999999999999975430 00
Q ss_pred CCCccccCCCCCceecccccccccccchhcccccc--ccccCCCCcEEEeeeehhhhcccccceeeeceeeeCCCCCCCC
Q 013183 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRG 239 (448)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~Fs~~f~~--~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~~C~G~G 239 (448)
+. ++++ ++|...|++ .....+.++++.+.++|+++..|+.+.+.+.....|..|.|.|
T Consensus 115 ~~-------g~~~-------------~~~~~~~~~~~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~ 174 (288)
T KOG0715|consen 115 FG-------GNPF-------------DVFLEFFGGKMNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSG 174 (288)
T ss_pred cc-------CCcc-------------chHHHhhcccccccccCcccccccccCHHHHhhccccceEEEeecccccccCcC
Confidence 00 1111 122222221 1123356888889999999999999999999999999999999
Q ss_pred ccCCCccccCCCccceeEEEe---CCccc-cCCCcCCceEEeeecceeecCCcEEeceEEEEEEecCCCCCCCEEEECCC
Q 013183 240 FPADAKTKICSTCRGIGRVTI---PPFTS-TCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEA 315 (448)
Q Consensus 240 ~~~~~~~~~C~~C~G~G~~~~---~~~~~-~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~IppG~~~G~~i~~~g~ 315 (448)
...+.....|..|.|+|.+.. .++.. +|..|.|.|.+..+.|..|.|.|.+...+.+.|.+|+|+.++.+|++.+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~~ 254 (288)
T KOG0715|consen 175 AEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLRDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAGH 254 (288)
T ss_pred cccccccccchhhhCcccccccccCCcceeecccccccceeccchHHHhhcchhhhhheeEEeecCcccccccEEEEecC
Confidence 999999999999999995432 23322 69999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEeecCHHH
Q 013183 316 GNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQ 357 (448)
Q Consensus 316 G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~I~l~e 357 (448)
|.. ||+|.+.|.+++.|+|+|.|+++++.|++.+
T Consensus 255 ~~~--------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~ 288 (288)
T KOG0715|consen 255 GND--------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ 288 (288)
T ss_pred Ccc--------eEEEEEEeccCcccccccCcccccccccccC
Confidence 754 9999999999999999999999999998753
No 36
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=3.3e-22 Score=196.65 Aligned_cols=264 Identities=29% Similarity=0.475 Sum_probs=179.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCCccccC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~~~~~~ 159 (448)
..|||++|+|.++|+.+||++||+++|++||||+++.. ..++++|++|++||++|+||.+|..||.+++.+..+.....
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~~ 81 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSFS 81 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCCC
Confidence 46999999999999999999999999999999998765 24556899999999999999999999999875544311000
Q ss_pred CC-CCC---ccccCCCCCceeccccc--cccc----------c-cch-------hcccccc-----------ccccCCCC
Q 013183 160 GD-AEG---FRYAGDAEGFRYAYQTH--FSDS----------F-HKI-------FSEIFED-----------ETSHFAPD 204 (448)
Q Consensus 160 ~~-~~~---~~~~~~~~~f~~~~~~~--f~~~----------f-~~~-------Fs~~f~~-----------~~~~~g~d 204 (448)
.. ..+ +......+.|.++|+.. ++.. + ... +....+. ....+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
T KOG0714|consen 82 SSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSPP 161 (306)
T ss_pred CCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCCC
Confidence 00 010 11111122333444311 0000 0 000 0001110 00111122
Q ss_pred cEEEeeeehhhhcccccceeeeceeeeCCCCCCCCccCCCccccCCCccceeEEEeCCccccCCCcCCceEEeeecceee
Q 013183 205 IQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTC 284 (448)
Q Consensus 205 i~~~l~isl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C 284 (448)
+...+.+++++.+.|+.+...+.+... .....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~- 193 (306)
T KOG0714|consen 162 VEHPLRVSLEDLYKGESKKMKISRQSF-----------------------------------------------TSNGR- 193 (306)
T ss_pred ccCCcceeHHHhccccceeeecccccc-----------------------------------------------cCCcc-
Confidence 333344466666666655555433211 00000
Q ss_pred cCCcEEeceEEEEEEecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEE--eecCHHHHhcCC
Q 013183 285 KGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVD--SNISFTQAILGG 362 (448)
Q Consensus 285 ~g~G~~~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~--~~I~l~eAl~G~ 362 (448)
........+.+.+.++++.|+.+....+|+... +..|-++++.+..++|+.|.+.++||... ..|++.+|++|.
T Consensus 194 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~ 269 (306)
T KOG0714|consen 194 ---EGSSRSRYLSISIKPGWKEGTKITFPEEGDEEP-GILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGV 269 (306)
T ss_pred ---cccCccceeEEeccCCcccccceeccccccccC-CcCcceeEEEEecCCcccccCCCccceecccceeehhhhhcCc
Confidence 012345678999999999999999999998764 36788999999999999999999999999 999999999999
Q ss_pred EEEEeCCCCe-EEEEeC-CCCCCCcEEEEcCCCCCC
Q 013183 363 KVDVPTLSGK-VQVKIP-KGVQPGQLLVLRGKGLAK 396 (448)
Q Consensus 363 ~~~i~tldG~-~~v~ip-~g~~~g~~~~l~g~G~p~ 396 (448)
...++++++. ..+.+. ..+.++....++++|+|.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (306)
T KOG0714|consen 270 TVFVPTLDGRSYSLSINKDLIEPGEEDVIPGEGLPC 305 (306)
T ss_pred ceeeecccCccccCcccccccCCCceeeecCCCCCC
Confidence 9999999987 444444 567899999999999985
No 37
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=1.3e-19 Score=170.92 Aligned_cols=72 Identities=49% Similarity=0.808 Sum_probs=68.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~ 152 (448)
..|+|+|||++++|+.++||||||+||++||||+++++|++.++|++||+||+||+||.+|..||.+|+.+.
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l 101 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGL 101 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHH
Confidence 579999999999999999999999999999999999999999999999999999999999999999977654
No 38
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=1.8e-17 Score=155.80 Aligned_cols=68 Identities=56% Similarity=0.903 Sum_probs=64.7
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh-HHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 013183 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRDSEKRAQYDRR 147 (448)
Q Consensus 80 ~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~-a~~~f~~i~~Ay~vL~d~~~R~~Yd~~ 147 (448)
...+||+||||+++|+..||++|||++|++||||+++.++. ++++|+.|++||++|+|+.+|..||..
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~ 72 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKI 72 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence 45699999999999999999999999999999999998885 999999999999999999999999996
No 39
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.74 E-value=4.7e-18 Score=136.24 Aligned_cols=71 Identities=45% Similarity=0.823 Sum_probs=61.0
Q ss_pred ceEEEeecCHHHHhcCCEEEEeCCCC-eEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC
Q 013183 346 DVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 346 DL~~~~~I~l~eAl~G~~~~i~tldG-~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~ 416 (448)
||+++++|+++||++|++++|+|+|| .+.|+||+++++|++++|+|+|||.....+.+|||||+|+|.||+
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~ 72 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPK 72 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--S
T ss_pred CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCC
Confidence 89999999999999999999999999 689999999999999999999999875545689999999999998
No 40
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=2.8e-18 Score=167.36 Aligned_cols=73 Identities=52% Similarity=0.847 Sum_probs=69.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCC
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~ 153 (448)
..|||++|||+.+|+.+||++|||+.|++||||||++||.|.++|+.+.+||+||+|+.+|+.||.++..+..
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~ 76 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSS 76 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhccc
Confidence 5699999999999999999999999999999999999999999999999999999999999999999766543
No 41
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.73 E-value=6e-18 Score=129.30 Aligned_cols=63 Identities=54% Similarity=0.979 Sum_probs=59.8
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhhhh
Q 013183 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYD 145 (448)
Q Consensus 83 ~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~~R~~Yd 145 (448)
|||+||||+++++.++||++|+++++++|||+++++. .+++.|+.|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 5899999999999999999999999999999988765 58899999999999999999999998
No 42
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=6.3e-18 Score=169.18 Aligned_cols=75 Identities=40% Similarity=0.721 Sum_probs=68.5
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---hhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCCC
Q 013183 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN---PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSEN 154 (448)
Q Consensus 80 ~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~---~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~~ 154 (448)
...+||.+|+|+++||.+|||+|||++++.|||||..+. ..|++.|+.|.+|||||+||.+|++||.+|++|...
T Consensus 7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t 84 (546)
T KOG0718|consen 7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKT 84 (546)
T ss_pred chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccc
Confidence 345999999999999999999999999999999998742 248999999999999999999999999999998863
No 43
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=5e-18 Score=169.94 Aligned_cols=73 Identities=48% Similarity=0.709 Sum_probs=67.0
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCC
Q 013183 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (448)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g 151 (448)
.+.+.||++|||.++|++.|||++||+||++||||+|+.. .+|.++|+.|+.||+|||||..|++||.+.++.
T Consensus 5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqi 78 (508)
T KOG0717|consen 5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQI 78 (508)
T ss_pred hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHH
Confidence 4567999999999999999999999999999999998765 468999999999999999999999999987743
No 44
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.68 E-value=3.8e-17 Score=176.71 Aligned_cols=74 Identities=31% Similarity=0.508 Sum_probs=68.2
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCCC
Q 013183 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (448)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~~ 153 (448)
....+||++|||+++||..|||+|||+||++||||+++++ .|.++|++|++||+||+||.+|+.||++|..|..
T Consensus 570 ~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~ 643 (1136)
T PTZ00341 570 IPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK 643 (1136)
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccC
Confidence 4467999999999999999999999999999999999864 6888999999999999999999999999877654
No 45
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.64 E-value=1.6e-16 Score=146.50 Aligned_cols=69 Identities=48% Similarity=0.798 Sum_probs=63.6
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CChhHHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 013183 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANK--NNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (448)
Q Consensus 80 ~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~--~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~ 148 (448)
..+|+|+||||.++|+..+|++||++||++||||+++ ...++.++|++++.||.||+|.++|+.||..|
T Consensus 12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG 82 (264)
T KOG0719|consen 12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETG 82 (264)
T ss_pred cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccC
Confidence 3459999999999999999999999999999999994 33568999999999999999999999999985
No 46
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.63 E-value=4.5e-16 Score=117.15 Aligned_cols=59 Identities=58% Similarity=0.901 Sum_probs=54.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ChhHHHHHHHHHHHHHHhhhhhh
Q 013183 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN-NPSAKRKFQEIRDAYETLRDSEK 140 (448)
Q Consensus 82 ~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~-~~~a~~~f~~i~~Ay~vL~d~~~ 140 (448)
+|||++|||+++++.++||+||+++++++|||++++ .+.+.+.|++|++||++|+||.+
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~ 60 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence 389999999999999999999999999999999986 56788999999999999999853
No 47
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.61 E-value=3.4e-15 Score=149.22 Aligned_cols=134 Identities=28% Similarity=0.567 Sum_probs=100.5
Q ss_pred EEeeeehhhhcccccceeee--ceeeeCCCCCCCCccCCC-------ccccCCCccceeEEEeCCccccCCCcCCceEEe
Q 013183 207 VELVLSFAEAAKGCTKHVSF--DAFVPCDSCHGRGFPADA-------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII 277 (448)
Q Consensus 207 ~~l~isl~e~~~G~~~~i~~--~~~~~C~~C~G~G~~~~~-------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~ 277 (448)
.++.++-...+.-|.-.-.- +..+.|++|+|+|..... ...+|+.|+|+|.+ +..+|..|+|.|++.
T Consensus 135 ~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~----i~~pC~~C~G~G~v~ 210 (371)
T COG0484 135 KEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKI----IKDPCGKCKGKGRVK 210 (371)
T ss_pred eeEecceeeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeE----CCCCCCCCCCCCeEe
Confidence 44555555545444333211 256889999999975332 26799999999998 578999999999987
Q ss_pred eecceeecCC-cEEeceE--------------------------------------------------------------
Q 013183 278 KDHCMTCKGS-GVVDGVK-------------------------------------------------------------- 294 (448)
Q Consensus 278 ~~~C~~C~g~-G~~~~~~-------------------------------------------------------------- 294 (448)
+..-.+++.+ |+.++.+
T Consensus 211 ~~~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g 290 (371)
T COG0484 211 KKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDG 290 (371)
T ss_pred eeeEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCC
Confidence 7666666654 4444433
Q ss_pred EEEEEecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCC
Q 013183 295 EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDG 344 (448)
Q Consensus 295 ~l~V~IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G 344 (448)
.++|.||||++.|++++|+|+|.+...+...|||||+|+|.-...+....
T Consensus 291 ~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~v~v~~P~~ls~~q 340 (371)
T COG0484 291 RVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVRVKVETPKNLSDEQ 340 (371)
T ss_pred CEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEEEEEEcCCCCCHHH
Confidence 67899999999999999999999987777789999999999766654433
No 48
>PHA03102 Small T antigen; Reviewed
Probab=99.60 E-value=8.3e-16 Score=136.41 Aligned_cols=66 Identities=24% Similarity=0.466 Sum_probs=60.8
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCC
Q 013183 82 RDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (448)
Q Consensus 82 ~~~y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g 151 (448)
..+|++|||+++| |.+|||+|||++|+++|||++++ +++|++|++||++|+|+.+|..||.++...
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~ 72 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----EEKMKELNTLYKKFRESVKSLRDLDGEEDS 72 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----hHHHHHHHHHHHHHhhHHHhccccccCCcc
Confidence 4789999999999 99999999999999999999764 579999999999999999999999997543
No 49
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.60 E-value=1.7e-15 Score=111.83 Aligned_cols=55 Identities=56% Similarity=0.985 Sum_probs=51.8
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhh
Q 013183 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD 137 (448)
Q Consensus 83 ~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d 137 (448)
|||++|||+++++.++||++|++|++++|||++++.+.+.+.|++|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 6899999999999999999999999999999997656788999999999999986
No 50
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.58 E-value=2.6e-15 Score=146.08 Aligned_cols=69 Identities=48% Similarity=0.747 Sum_probs=63.7
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---hHHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 013183 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP---SAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (448)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~---~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~ 147 (448)
+..+|||+||||.++|+..||.||||++|.+||||...+.. .|+++|-.|..|-|||+||++|+.+|..
T Consensus 391 s~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnG 462 (504)
T KOG0624|consen 391 SGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNG 462 (504)
T ss_pred hccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCC
Confidence 45689999999999999999999999999999999987644 3889999999999999999999999984
No 51
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.57 E-value=3.5e-15 Score=136.73 Aligned_cols=71 Identities=37% Similarity=0.665 Sum_probs=65.4
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccc
Q 013183 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (448)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~ 149 (448)
....|||+||||+++|+..|||+|||+|.++|||||++...+.++.|..|++||+.|+|+..|..|..||.
T Consensus 96 ~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~ 166 (230)
T KOG0721|consen 96 RQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGN 166 (230)
T ss_pred hhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCC
Confidence 45679999999999999999999999999999999998655678889999999999999999999999964
No 52
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.47 E-value=6.5e-14 Score=127.73 Aligned_cols=66 Identities=32% Similarity=0.539 Sum_probs=58.8
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 013183 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRR 147 (448)
Q Consensus 82 ~~~y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~d~~~R~~Yd~~ 147 (448)
.|||++|||++. ++..+|+++||+|++++|||+..+.+. +.+.|+.||+||++|+||.+|+.|+..
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~ 73 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLS 73 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHH
Confidence 389999999995 788999999999999999999865433 567899999999999999999999874
No 53
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.45 E-value=1.1e-13 Score=125.63 Aligned_cols=67 Identities=30% Similarity=0.510 Sum_probs=58.4
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 013183 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (448)
Q Consensus 82 ~~~y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~---a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~ 148 (448)
.|||++|||++. ++..+|+++||+|++++|||++.+..+ +.+.+..||+||++|+||.+|+.|+...
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l 73 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLL 73 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence 489999999996 789999999999999999999864322 3346789999999999999999998864
No 54
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.44 E-value=1.5e-13 Score=125.64 Aligned_cols=67 Identities=31% Similarity=0.513 Sum_probs=58.8
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChhHHH-----HHHHHHHHHHHhhhhhhhhhhhhc
Q 013183 81 KRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPSAKR-----KFQEIRDAYETLRDSEKRAQYDRR 147 (448)
Q Consensus 81 ~~~~y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~a~~-----~f~~i~~Ay~vL~d~~~R~~Yd~~ 147 (448)
..|||++|||++. ++..+|+++||+|++++|||++.+.+.+++ .++.||+||++|+||.+|+.|+..
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~ 78 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLH 78 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHH
Confidence 3699999999995 689999999999999999999876655443 458999999999999999999974
No 55
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.44 E-value=2.7e-13 Score=138.59 Aligned_cols=140 Identities=25% Similarity=0.468 Sum_probs=98.4
Q ss_pred EEeeeehhhhcccccceee--eceeeeCCCCCCCCccCC---------CccccCCCccceeEEEeCCccccCCCcCCceE
Q 013183 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (448)
Q Consensus 207 ~~l~isl~e~~~G~~~~i~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (448)
.++.++-...+..|.-.-. -.....|+.|+|+|.... .....|+.|+|.|.. +...|..|+|.|.
T Consensus 145 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 220 (369)
T PRK14282 145 IPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKI----PGEYCHECGGSGR 220 (369)
T ss_pred EEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCccee----CCCCCCCCCCcee
Confidence 3444554554543333221 123468999999997532 135689999999987 4578999999997
Q ss_pred EeeecceeecCC-cEEeceE------------------------------------------------------------
Q 013183 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (448)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (448)
+.+..-.++..+ |+..+.+
T Consensus 221 v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~l 300 (369)
T PRK14282 221 IRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLP 300 (369)
T ss_pred EEEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCC
Confidence 654322222221 2111111
Q ss_pred ---EEEEEecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEE
Q 013183 295 ---EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVD 350 (448)
Q Consensus 295 ---~l~V~IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~ 350 (448)
.++|.||||+++|++++|+|+|++...+..+|||||+|+|+.|+.|++++.+|+.+
T Consensus 301 dG~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~ 359 (369)
T PRK14282 301 EGGTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKE 359 (369)
T ss_pred CCcEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 58999999999999999999999865445689999999999999999999887544
No 56
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.44 E-value=1.9e-13 Score=124.47 Aligned_cols=69 Identities=23% Similarity=0.435 Sum_probs=61.0
Q ss_pred CCCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 013183 80 SKRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (448)
Q Consensus 80 ~~~~~y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~ 148 (448)
...|||++||+++. .+..+|+++||+|++++|||++.+.++ +.+.|..||+||++|+||.+|+.|+...
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l 77 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLAL 77 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHh
Confidence 35699999999996 678999999999999999999876543 5678999999999999999999999753
No 57
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.41 E-value=5.7e-13 Score=136.00 Aligned_cols=119 Identities=24% Similarity=0.596 Sum_probs=91.6
Q ss_pred eeeeCCCCCCCCccCCC---------ccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC-cEEeceE---
Q 013183 228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (448)
Q Consensus 228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (448)
....|+.|+|+|..... ....|+.|+|.|.. ....|..|+|.|.+.+..-.+...+ |+..+.+
T Consensus 164 ~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~ 239 (365)
T PRK14290 164 KLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRI----PEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRV 239 (365)
T ss_pred CCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeE----ccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEE
Confidence 35689999999964211 24689999999987 4678999999998754333333222 2221111
Q ss_pred ---------------------------------------------------------EEEEEecCCCCCCCEEEECCCCC
Q 013183 295 ---------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGN 317 (448)
Q Consensus 295 ---------------------------------------------------------~l~V~IppG~~~G~~i~~~g~G~ 317 (448)
+++|.||+|+++|++++++|+|+
T Consensus 240 ~g~G~~~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip~g~~~g~~iri~g~G~ 319 (365)
T PRK14290 240 KGKGQSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVLKIKGAGM 319 (365)
T ss_pred ccccCCCCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEECCccCCCcEEEECCCCC
Confidence 68999999999999999999999
Q ss_pred CCCCCCCcccEEEEEEEecCCCcccCCCceEEE
Q 013183 318 AGGRGRQHGNLFIKLKVADDPIFSRDGADVYVD 350 (448)
Q Consensus 318 ~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~ 350 (448)
+...+..+|||||+|+|..++.|++++.+|+.+
T Consensus 320 p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~ 352 (365)
T PRK14290 320 PHLNGHGSGDLLVRINVEVPKRLTSKQKELIRE 352 (365)
T ss_pred CCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 876555689999999999999999999888665
No 58
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.38 E-value=8.4e-13 Score=135.17 Aligned_cols=118 Identities=27% Similarity=0.581 Sum_probs=89.7
Q ss_pred eeeCCCCCCCCccCC---------CccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC-cEEeceE----
Q 013183 229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---- 294 (448)
Q Consensus 229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---- 294 (448)
...|+.|+|+|.... ....+|+.|+|+|.. +...|..|+|.|.+.+..-.++..+ |+..+.+
T Consensus 158 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~ 233 (377)
T PRK14298 158 PKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQV----IESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLS 233 (377)
T ss_pred CCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcc----cCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEEe
Confidence 367999999996431 225689999999987 4568999999998765333333321 2222111
Q ss_pred ----------------------------------------------------------EEEEEecCCCCCCCEEEECCCC
Q 013183 295 ----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAG 316 (448)
Q Consensus 295 ----------------------------------------------------------~l~V~IppG~~~G~~i~~~g~G 316 (448)
.++|.||+|+++|++++++|+|
T Consensus 234 g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~lri~g~G 313 (377)
T PRK14298 234 GEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSVFRLKDKG 313 (377)
T ss_pred cccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCCEEEEeCCCcccCCEEEECCCC
Confidence 5789999999999999999999
Q ss_pred CCCCCCCCcccEEEEEEEecCCCcccCCCceEEE
Q 013183 317 NAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVD 350 (448)
Q Consensus 317 ~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~ 350 (448)
.+...+...|||||+|+|..++.+++++.+|+.+
T Consensus 314 ~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~ 347 (377)
T PRK14298 314 MPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLRE 347 (377)
T ss_pred CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 9865555689999999999999999888777544
No 59
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.37 E-value=1.3e-12 Score=133.49 Aligned_cols=118 Identities=29% Similarity=0.599 Sum_probs=89.7
Q ss_pred eeeCCCCCCCCccCC-----CccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC-cEEeceE--------
Q 013183 229 FVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK-------- 294 (448)
Q Consensus 229 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~-------- 294 (448)
...|+.|+|+|.... .....|+.|+|.|.. +...|..|+|.|.+.+..-.+.... |+..+.+
T Consensus 161 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~ 236 (366)
T PRK14294 161 PTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKV----IVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGE 236 (366)
T ss_pred cccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCee----cCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCcc
Confidence 467999999997531 235699999999987 4578999999998754322222221 2221111
Q ss_pred ------------------------------------------------------EEEEEecCCCCCCCEEEECCCCCCCC
Q 013183 295 ------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGNAGG 320 (448)
Q Consensus 295 ------------------------------------------------------~l~V~IppG~~~G~~i~~~g~G~~~~ 320 (448)
.++|.||+|+++|++++|+|+|++..
T Consensus 237 ~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~iri~G~G~p~~ 316 (366)
T PRK14294 237 AGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFRFKGKGIPSL 316 (366)
T ss_pred CCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEEEECCCCCCCC
Confidence 46899999999999999999999876
Q ss_pred CCCCcccEEEEEEEecCCCcccCCCceEEE
Q 013183 321 RGRQHGNLFIKLKVADDPIFSRDGADVYVD 350 (448)
Q Consensus 321 ~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~ 350 (448)
.+..+|||||+|+|..|+.|+++..+|+..
T Consensus 317 ~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~ 346 (366)
T PRK14294 317 RGGGRGDQIIEVEVKVPTRLTKKQEELLTE 346 (366)
T ss_pred CCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 555689999999999999999988777654
No 60
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.37 E-value=4e-13 Score=133.81 Aligned_cols=69 Identities=45% Similarity=0.719 Sum_probs=65.3
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 013183 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (448)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~ 147 (448)
+..+|||.|||+.++|+..|||+|||++|+.||||++.++ .+++.+|++|-+||.+|+||.+|..||..
T Consensus 370 SkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg 439 (486)
T KOG0550|consen 370 SKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSG 439 (486)
T ss_pred hhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccc
Confidence 4568999999999999999999999999999999999887 67999999999999999999999999985
No 61
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.36 E-value=4.8e-13 Score=134.59 Aligned_cols=68 Identities=35% Similarity=0.592 Sum_probs=64.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhccc
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~ 149 (448)
..|+|.+|||+.++|+++|||.||++|...|||||. .+.|+|.|+.++.|||+|+|+.+|..||....
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~ 301 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLELK 301 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHHHH
Confidence 579999999999999999999999999999999998 68999999999999999999999999999743
No 62
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.36 E-value=1.6e-12 Score=132.68 Aligned_cols=138 Identities=22% Similarity=0.464 Sum_probs=96.4
Q ss_pred EEeeeehhhhcccccceee--eceeeeCCCCCCCCccCC-----CccccCCCccceeEEEeCCccccCCCcCCceEEeee
Q 013183 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (448)
Q Consensus 207 ~~l~isl~e~~~G~~~~i~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (448)
.++.++....+..|.-.-. -.....|+.|+|+|.... .....|+.|+|.|.+ +...|..|+|.|.+.+.
T Consensus 139 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~ 214 (365)
T PRK14285 139 NNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKI----ISNPCKSCKGKGSLKKK 214 (365)
T ss_pred EEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccc----cCCCCCCCCCCCEEecc
Confidence 3445554555443333221 123467999999996431 235799999999987 45789999999977543
Q ss_pred cceeecCC-cEEeceE---------------------------------------------------------------E
Q 013183 280 HCMTCKGS-GVVDGVK---------------------------------------------------------------E 295 (448)
Q Consensus 280 ~C~~C~g~-G~~~~~~---------------------------------------------------------------~ 295 (448)
.-.++..+ |+..+.+ .
T Consensus 215 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~ 294 (365)
T PRK14285 215 ETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKK 294 (365)
T ss_pred EEEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCE
Confidence 32333221 2111111 6
Q ss_pred EEEEecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceE
Q 013183 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348 (448)
Q Consensus 296 l~V~IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~ 348 (448)
++|.||+|+++|++++++|+|++...+...|||||+|+|+.|+.|.+++..|+
T Consensus 295 v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l 347 (365)
T PRK14285 295 IKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLL 347 (365)
T ss_pred EEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence 89999999999999999999998655555799999999999999988886553
No 63
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.34 E-value=2.2e-12 Score=132.07 Aligned_cols=141 Identities=24% Similarity=0.505 Sum_probs=98.7
Q ss_pred EEeeeehhhhcccccceeee--ceeeeCCCCCCCCccCC-----CccccCCCccceeEEEeCCccccCCCcCCceEEeee
Q 013183 207 VELVLSFAEAAKGCTKHVSF--DAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (448)
Q Consensus 207 ~~l~isl~e~~~G~~~~i~~--~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (448)
.++.++-...+..|...-.- .....|+.|+|+|.... ....+|+.|+|.|.. +...|..|+|+|.+.+.
T Consensus 135 ~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~ 210 (371)
T PRK10767 135 KEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKI----IKDPCKKCHGQGRVEKE 210 (371)
T ss_pred EEEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeE----CCCCCCCCCCCceEeee
Confidence 34444445555444332211 22367999999996421 234589999999987 45789999999987554
Q ss_pred cceeecCC-cEEeceE--------------------------------------------------------------EE
Q 013183 280 HCMTCKGS-GVVDGVK--------------------------------------------------------------EV 296 (448)
Q Consensus 280 ~C~~C~g~-G~~~~~~--------------------------------------------------------------~l 296 (448)
...++... |+..+.+ .+
T Consensus 211 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i 290 (371)
T PRK10767 211 KTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRV 290 (371)
T ss_pred eeEEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcE
Confidence 33333322 1111111 57
Q ss_pred EEEecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCceEEEe
Q 013183 297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (448)
Q Consensus 297 ~V~IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~ 351 (448)
+|.||||+++|++++++|+|.+...+...|||||+|+|..++.|++++.+|+.++
T Consensus 291 ~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l 345 (371)
T PRK10767 291 KLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEF 345 (371)
T ss_pred EEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 8999999999999999999998655556899999999999999999998876543
No 64
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.34 E-value=3.6e-13 Score=125.77 Aligned_cols=67 Identities=43% Similarity=0.759 Sum_probs=62.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~ 148 (448)
..|-|++|||+++|+.+||.+|||+||++||||++++ +++.+.|+.|.+|||+|.|.+.|..||-..
T Consensus 32 ~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~-~e~k~~F~~iAtayeilkd~e~rt~ydyal 98 (329)
T KOG0722|consen 32 AENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD-PESKKLFVKIATAYEILKDNETRTQYDYAL 98 (329)
T ss_pred chhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC-chhhhhhhhhhcccccccchhhHHhHHHHh
Confidence 4589999999999999999999999999999999985 667799999999999999999999999864
No 65
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.32 E-value=1.8e-12 Score=109.38 Aligned_cols=54 Identities=26% Similarity=0.433 Sum_probs=48.4
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhh
Q 013183 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136 (448)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~ 136 (448)
+...++|++|||++++|.+|||++||+|++++|||+++ + .+.|++|++|||+|.
T Consensus 62 Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG-s---~~~~~kIneAyevL~ 115 (116)
T PTZ00100 62 MSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG-S---TYIASKVNEAKDLLL 115 (116)
T ss_pred CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHh
Confidence 44579999999999999999999999999999999864 2 568899999999995
No 66
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.32 E-value=3.7e-12 Score=130.33 Aligned_cols=137 Identities=26% Similarity=0.490 Sum_probs=93.8
Q ss_pred EEeeeehhhhcccccceeee--ceeeeCCCCCCCCccCC-----CccccCCCccceeEEEeCCccccCCCcCCceEEeee
Q 013183 207 VELVLSFAEAAKGCTKHVSF--DAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (448)
Q Consensus 207 ~~l~isl~e~~~G~~~~i~~--~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (448)
.++.++....+..|.-.-.- .....|+.|+|+|.... .....|+.|+|.|.+ +...|..|+|.|.+.+.
T Consensus 137 k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~ 212 (373)
T PRK14301 137 VTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRV----ITHPCPKCKGSGIVQQT 212 (373)
T ss_pred EEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeee----cCCCCCCCCCCceeccc
Confidence 34444445555444333221 23467999999997531 235789999999997 35689999999987543
Q ss_pred cceeecCC-cEEeceE--------------------------------------------------------------EE
Q 013183 280 HCMTCKGS-GVVDGVK--------------------------------------------------------------EV 296 (448)
Q Consensus 280 ~C~~C~g~-G~~~~~~--------------------------------------------------------------~l 296 (448)
.-.++... |+..+.+ .+
T Consensus 213 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i 292 (373)
T PRK14301 213 RELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPV 292 (373)
T ss_pred eEEEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccE
Confidence 22222221 1111111 57
Q ss_pred EEEecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCce
Q 013183 297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADV 347 (448)
Q Consensus 297 ~V~IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL 347 (448)
+|.||+|+++|++++|+|+|.+...+...|||||+|+|..++.+..+..++
T Consensus 293 ~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I~~~V~~P~~l~~~q~~~ 343 (373)
T PRK14301 293 TLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEEL 343 (373)
T ss_pred EEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence 999999999999999999999876555689999999999887776555444
No 67
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.27 E-value=8.7e-12 Score=126.99 Aligned_cols=136 Identities=30% Similarity=0.597 Sum_probs=91.9
Q ss_pred Eeeeehhhhcccccceeee--ceeeeCCCCCCCCccCC---------CccccCCCccceeEEEeCCccccCCCcCCceEE
Q 013183 208 ELVLSFAEAAKGCTKHVSF--DAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (448)
Q Consensus 208 ~l~isl~e~~~G~~~~i~~--~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (448)
.+.++....+..|...-.- .....|+.|+|+|.... ....+|+.|+|.|.. +...|..|+|.|.+
T Consensus 137 ~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v 212 (354)
T TIGR02349 137 EIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKI----IKEPCSTCKGKGRV 212 (354)
T ss_pred EEEeecCCcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCccee----cCCCCCCCCCCcEe
Confidence 4444445544434332211 23567999999986421 224699999999997 35679999999986
Q ss_pred eeecceee--------------cCCcEEe--c----e-------------------------------------------
Q 013183 277 IKDHCMTC--------------KGSGVVD--G----V------------------------------------------- 293 (448)
Q Consensus 277 ~~~~C~~C--------------~g~G~~~--~----~------------------------------------------- 293 (448)
.+..-.+. .|.|... . .
T Consensus 213 ~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ld 292 (354)
T TIGR02349 213 KERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLD 292 (354)
T ss_pred cccceEEEEECCCCCCCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCC
Confidence 43222111 1111100 0 0
Q ss_pred EEEEEEecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCCce
Q 013183 294 KEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADV 347 (448)
Q Consensus 294 ~~l~V~IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL 347 (448)
-.++|.||+|+++|++++++|+|++...+..+|||||+|+|..++.++.+..++
T Consensus 293 G~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~~ 346 (354)
T TIGR02349 293 GDVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKEL 346 (354)
T ss_pred ceEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence 057899999999999999999999876555789999999999888887766544
No 68
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.27 E-value=7.7e-12 Score=127.90 Aligned_cols=116 Identities=26% Similarity=0.608 Sum_probs=86.2
Q ss_pred eeeCCCCCCCCccCC---------CccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC-cEEeceE----
Q 013183 229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---- 294 (448)
Q Consensus 229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---- 294 (448)
...|+.|+|+|.... ....+|+.|.|.|.+ +...|..|+|.|.+.+....++... |+..+.+
T Consensus 155 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~ 230 (371)
T PRK14287 155 PETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKI----IKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVS 230 (371)
T ss_pred CcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCcc----ccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEc
Confidence 467999999996532 124689999999987 4567999999997654333333221 2111111
Q ss_pred ----------------------------------------------------------EEEEEecCCCCCCCEEEECCCC
Q 013183 295 ----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAG 316 (448)
Q Consensus 295 ----------------------------------------------------------~l~V~IppG~~~G~~i~~~g~G 316 (448)
.++|.||||+++|++++++|+|
T Consensus 231 G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~~~ri~g~G 310 (371)
T PRK14287 231 GQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGTSFRLRGKG 310 (371)
T ss_pred cCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEEEEECCCccCCcEEEEcCCC
Confidence 5789999999999999999999
Q ss_pred CCCCCCCCcccEEEEEEEecCCCcccCCCceE
Q 013183 317 NAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348 (448)
Q Consensus 317 ~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~ 348 (448)
.+...+...|||||+|+|..++.++++...|+
T Consensus 311 ~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll 342 (371)
T PRK14287 311 VPNVHGRGQGDQHVQVRVVTPKNLTEKEKELM 342 (371)
T ss_pred ccCCCCCCCCCEEEEEEEEcCCCCCHHHHHHH
Confidence 98655556899999999999888877665443
No 69
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.27 E-value=1.4e-11 Score=126.01 Aligned_cols=112 Identities=29% Similarity=0.636 Sum_probs=82.4
Q ss_pred eeeCCCCCCCCccCC-----CccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC-cEEeceE--------
Q 013183 229 FVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK-------- 294 (448)
Q Consensus 229 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~-------- 294 (448)
...|+.|+|+|.... ....+|+.|+|.|.+. ...|..|+|.|.+.+..-.++... |+..+.+
T Consensus 162 ~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~ 237 (372)
T PRK14300 162 VTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQII----KNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGE 237 (372)
T ss_pred CccCCCccCeEEEEEeeceEEEEEeCCCCCccceEe----CCCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEecccc
Confidence 467999999997531 1345899999999983 568999999998754322222211 1111111
Q ss_pred -------------------------------------------------------EEEEEecCCCCCCCEEEECCCCCCC
Q 013183 295 -------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGNAG 319 (448)
Q Consensus 295 -------------------------------------------------------~l~V~IppG~~~G~~i~~~g~G~~~ 319 (448)
.++|.||||+++|++++++|+|++.
T Consensus 238 ~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~p~ 317 (372)
T PRK14300 238 AGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMSK 317 (372)
T ss_pred CCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCCCC
Confidence 6899999999999999999999986
Q ss_pred CCCCCcccEEEEEEEecCCCcccCC
Q 013183 320 GRGRQHGNLFIKLKVADDPIFSRDG 344 (448)
Q Consensus 320 ~~g~~~GDL~v~i~v~~h~~f~R~G 344 (448)
..+..+|||||+|+|..+..+.-+.
T Consensus 318 ~~~~~~GDL~V~~~v~~P~~ls~~q 342 (372)
T PRK14300 318 MRSTIRGDMLTHIHVEVPKNLSKRQ 342 (372)
T ss_pred CCCCCCCCEEEEEEEECCCCCCHHH
Confidence 5556789999999999877655443
No 70
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.26 E-value=6.9e-12 Score=129.17 Aligned_cols=115 Identities=30% Similarity=0.663 Sum_probs=84.3
Q ss_pred eeeCCCCCCCCccCC-----CccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC-cEEece---------
Q 013183 229 FVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGV--------- 293 (448)
Q Consensus 229 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~--------- 293 (448)
...|+.|+|+|.... ....+|+.|+|.|.+ +...|..|+|.|.+.+..-.++..+ |+.+++
T Consensus 175 ~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~ 250 (391)
T PRK14284 175 IKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRV----ITDPCSVCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYGD 250 (391)
T ss_pred CeecCccCCeeEEEEEeceEEEEEECCCCCCCCcc----cCCcCCCCCCcceecceEEEEEEECCCCCCCCEEEEecccc
Confidence 467999999987431 134689999999987 4567999999987644322222221 222111
Q ss_pred -------------------------------------------------------EEEEEEecCCCCCCCEEEECCCCCC
Q 013183 294 -------------------------------------------------------KEVKVTIPAGVDSGDTIRVPEAGNA 318 (448)
Q Consensus 294 -------------------------------------------------------~~l~V~IppG~~~G~~i~~~g~G~~ 318 (448)
..++|.||+|+++|++++|+|+|.+
T Consensus 251 ~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~g~~~~i~g~G~p 330 (391)
T PRK14284 251 AGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFP 330 (391)
T ss_pred CCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccCCCeEEEECCCCCC
Confidence 1568999999999999999999998
Q ss_pred CCCCCCcccEEEEEEEecCCCcccCCCce
Q 013183 319 GGRGRQHGNLFIKLKVADDPIFSRDGADV 347 (448)
Q Consensus 319 ~~~g~~~GDL~v~i~v~~h~~f~R~G~DL 347 (448)
...+..+|||||+|+|..++.++.+..+|
T Consensus 331 ~~~~~~~GDL~V~~~v~~P~~l~~~q~~l 359 (391)
T PRK14284 331 NVHGKGRGDLLVRISVETPQNLSEEQKEL 359 (391)
T ss_pred CCCCCCCCcEEEEEEEECCCCCCHHHHHH
Confidence 76555689999999999887776666554
No 71
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.26 E-value=1.6e-11 Score=125.52 Aligned_cols=114 Identities=24% Similarity=0.513 Sum_probs=84.3
Q ss_pred eeeeCCCCCCCCccCC-----CccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC-cEEeceE-------
Q 013183 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK------- 294 (448)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~------- 294 (448)
....|+.|+|+|.... .....|+.|+|+|.+ +...|..|+|.|.+.+..-.+...+ |+..+.+
T Consensus 155 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G 230 (369)
T PRK14288 155 ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKI----IKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKG 230 (369)
T ss_pred CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceE----ccccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCc
Confidence 3578999999996421 224589999999997 4567999999998765433333322 2221111
Q ss_pred -------------------------------------------------------EEEEEecCCCCCCCEEEECCCCCCC
Q 013183 295 -------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGNAG 319 (448)
Q Consensus 295 -------------------------------------------------------~l~V~IppG~~~G~~i~~~g~G~~~ 319 (448)
.++|.||||+++|++++++|+|.+.
T Consensus 231 ~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~ 310 (369)
T PRK14288 231 NEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKH 310 (369)
T ss_pred cCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCC
Confidence 5899999999999999999999986
Q ss_pred CCCCCcccEEEEEEEecCCCcccCCC
Q 013183 320 GRGRQHGNLFIKLKVADDPIFSRDGA 345 (448)
Q Consensus 320 ~~g~~~GDL~v~i~v~~h~~f~R~G~ 345 (448)
..+...|||||+|+|+.++.+..+..
T Consensus 311 ~~~~~~GDL~v~~~v~~P~~ls~~q~ 336 (369)
T PRK14288 311 PESSYRGSLIVELQVIYPKSLNKEQQ 336 (369)
T ss_pred CCCCCCCCEEEEEEEECCCCCCHHHH
Confidence 54445699999999998877655443
No 72
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.24 E-value=3.6e-11 Score=123.30 Aligned_cols=130 Identities=29% Similarity=0.544 Sum_probs=87.1
Q ss_pred EEeeeehhhhcccccceee--eceeeeCCCCCCCCccCC---------CccccCCCccceeEEEeCCccccCCCcCCceE
Q 013183 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (448)
Q Consensus 207 ~~l~isl~e~~~G~~~~i~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (448)
.++.++-...+..|.-.-. -.....|+.|+|+|.... .....|+.|+|.|.+ +..+|..|+|.|.
T Consensus 132 ~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 207 (378)
T PRK14278 132 KQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEV----IPDPCHECAGDGR 207 (378)
T ss_pred EEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCcccee----eCCCCCCCCCcee
Confidence 3444554555443432211 123467999999997431 125689999999997 3567999999998
Q ss_pred EeeecceeecCC-cEEeceE------------------------------------------------------------
Q 013183 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (448)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (448)
+.+..-.++... |+..+.+
T Consensus 208 v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl 287 (378)
T PRK14278 208 VRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAI 287 (378)
T ss_pred EecceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecC
Confidence 754322222211 1111111
Q ss_pred ---EEEEEecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCc
Q 013183 295 ---EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIF 340 (448)
Q Consensus 295 ---~l~V~IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f 340 (448)
.++|.||+|+++|++++++|+|.+...+...|||||+|+|.-...+
T Consensus 288 d~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~~~V~~P~~L 336 (378)
T PRK14278 288 LDGPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVPTRL 336 (378)
T ss_pred CCCeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEEcCCCC
Confidence 6799999999999999999999986555568999999999844433
No 73
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.23 E-value=1.1e-11 Score=121.13 Aligned_cols=59 Identities=39% Similarity=0.605 Sum_probs=52.2
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---C----hhHHHHHHHHHHHHHHhhh
Q 013183 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN---N----PSAKRKFQEIRDAYETLRD 137 (448)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~---~----~~a~~~f~~i~~Ay~vL~d 137 (448)
....++|++|||++++|.+|||+|||+|+++||||++.+ + +.++++|++|++||++|+.
T Consensus 197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 345799999999999999999999999999999999743 1 2478999999999999986
No 74
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.23 E-value=2.3e-11 Score=124.41 Aligned_cols=135 Identities=26% Similarity=0.457 Sum_probs=89.2
Q ss_pred EEeeeehhhhcccccceee--eceeeeCCCCCCCCccCC-----CccccCCCccceeEEEeCCccccCCCcCCceEEeee
Q 013183 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (448)
Q Consensus 207 ~~l~isl~e~~~G~~~~i~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (448)
.++.++....+.-|.-.-. -.....|+.|+|+|.... .....|+.|+|+|.+. ...|..|+|.|.+.+.
T Consensus 143 k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~~~~~ 218 (372)
T PRK14286 143 YKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVI----SNPCKTCGGQGLQEKR 218 (372)
T ss_pred EEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEe----cccCCCCCCCcEEecc
Confidence 3445555555443332221 122367999999996421 2356899999999883 5679999999987542
Q ss_pred cceeec--------------CCcEEe------c--------------------------------------------eEE
Q 013183 280 HCMTCK--------------GSGVVD------G--------------------------------------------VKE 295 (448)
Q Consensus 280 ~C~~C~--------------g~G~~~------~--------------------------------------------~~~ 295 (448)
.-.++. |.|... + .+.
T Consensus 219 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~ 298 (372)
T PRK14286 219 RTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKK 298 (372)
T ss_pred eEEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCE
Confidence 222221 111100 0 005
Q ss_pred EEEEecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcccCCC
Q 013183 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGA 345 (448)
Q Consensus 296 l~V~IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~ 345 (448)
++|.||+|+++|++++++|+|.+...+...|||||+|+|.-+..+..+..
T Consensus 299 i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk 348 (372)
T PRK14286 299 AKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEIPKKITRRQR 348 (372)
T ss_pred EEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHH
Confidence 89999999999999999999998655556799999999996655544443
No 75
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.22 E-value=5.2e-11 Score=122.59 Aligned_cols=130 Identities=28% Similarity=0.550 Sum_probs=87.9
Q ss_pred EEeeeehhhhcccccceee--eceeeeCCCCCCCCccCC-----CccccCCCccceeEEEeCCccccCCCcCCceEEeee
Q 013183 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (448)
Q Consensus 207 ~~l~isl~e~~~G~~~~i~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (448)
.++.++-...+.-|.-.-. -.....|+.|+|+|.... ....+|+.|+|+|.+ +...|..|+|.|.+.+.
T Consensus 166 ~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----i~~~C~~C~G~g~v~~~ 241 (392)
T PRK14279 166 MPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSI----IEDPCEECKGTGVTTRT 241 (392)
T ss_pred EEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEE----eCCcCCCCCCCeEEEEe
Confidence 3445555555443332221 123478999999997532 135799999999998 35689999999987543
Q ss_pred cceeecCC-cEEeceE--------------------------------------------------------------EE
Q 013183 280 HCMTCKGS-GVVDGVK--------------------------------------------------------------EV 296 (448)
Q Consensus 280 ~C~~C~g~-G~~~~~~--------------------------------------------------------------~l 296 (448)
.-.++..+ |+..+.+ .+
T Consensus 242 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i 321 (392)
T PRK14279 242 RTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPV 321 (392)
T ss_pred eeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceE
Confidence 22222211 1111111 57
Q ss_pred EEEecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcc
Q 013183 297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFS 341 (448)
Q Consensus 297 ~V~IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~ 341 (448)
+|+||+|+++|++++++|+|++.. +...|||||+|+|.-+..+.
T Consensus 322 ~v~Ip~g~~~g~~iri~g~G~p~~-~~~~GDL~I~~~v~~P~~Ls 365 (392)
T PRK14279 322 GVKVPAGTADGRILRVRGRGVPKR-SGGAGDLLVTVKVAVPPNLD 365 (392)
T ss_pred EEEECCCCCCCCEEEECCCCCCCC-CCCCCCEEEEEEEECCCCCC
Confidence 899999999999999999999863 45689999999999655433
No 76
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.22 E-value=4.9e-11 Score=123.03 Aligned_cols=109 Identities=33% Similarity=0.593 Sum_probs=80.0
Q ss_pred eeeeCCCCCCCCccCCC---------ccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC-cEEeceE---
Q 013183 228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (448)
Q Consensus 228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (448)
....|+.|+|+|..... ...+|+.|+|.|.+. ...|..|+|.|.+.+..-.++... |+..+.+
T Consensus 178 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~ 253 (397)
T PRK14281 178 ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVV----KDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTL 253 (397)
T ss_pred CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeee----CCCCCCCCCCccEecceEEEEecCCCCCCCCEEEE
Confidence 35689999999975321 246899999999983 568999999998754333333221 2211111
Q ss_pred -----------------------------------------------------------EEEEEecCCCCCCCEEEECCC
Q 013183 295 -----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEA 315 (448)
Q Consensus 295 -----------------------------------------------------------~l~V~IppG~~~G~~i~~~g~ 315 (448)
.++|.||+|+++|++++|+|+
T Consensus 254 ~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~G~~~ri~g~ 333 (397)
T PRK14281 254 RGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIPAGTQPETMLRIPGK 333 (397)
T ss_pred ecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEEeCCccCCCcEEEEcCC
Confidence 578999999999999999999
Q ss_pred CCCCCCCCCcccEEEEEEEecCCCc
Q 013183 316 GNAGGRGRQHGNLFIKLKVADDPIF 340 (448)
Q Consensus 316 G~~~~~g~~~GDL~v~i~v~~h~~f 340 (448)
|.+...+...|||||+|+|.-...+
T Consensus 334 G~P~~~~~~~GDL~V~~~V~~P~~L 358 (397)
T PRK14281 334 GIGHLRGSGRGDQYVRVNVFVPKEV 358 (397)
T ss_pred CCCCCCCCCCCCEEEEEEEEcCCCC
Confidence 9986555568999999999854433
No 77
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.21 E-value=2.9e-11 Score=123.98 Aligned_cols=130 Identities=26% Similarity=0.547 Sum_probs=87.0
Q ss_pred Eeeeehhhhcccccceee--eceeeeCCCCCCCCccCC---------CccccCCCccceeEEEeCCccccCCCcCCceEE
Q 013183 208 ELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (448)
Q Consensus 208 ~l~isl~e~~~G~~~~i~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (448)
++.++....+..|.-.-. -.....|+.|+|+|.... ....+|+.|+|.|.+ +...|..|+|+|.+
T Consensus 137 ~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v 212 (376)
T PRK14280 137 EIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQE----IKEKCPTCHGKGKV 212 (376)
T ss_pred EEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCce----ecCCCCCCCCceEE
Confidence 444444444443332221 123467999999996421 135689999999987 45679999999987
Q ss_pred eeecceeecCC-cEEeceE-------------------------------------------------------------
Q 013183 277 IKDHCMTCKGS-GVVDGVK------------------------------------------------------------- 294 (448)
Q Consensus 277 ~~~~C~~C~g~-G~~~~~~------------------------------------------------------------- 294 (448)
.+..-.++... |+..+.+
T Consensus 213 ~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld 292 (376)
T PRK14280 213 RKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLH 292 (376)
T ss_pred EEEEEEEEEeCCCCcCCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCC
Confidence 54322222211 1111111
Q ss_pred -EEEEEecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCCcc
Q 013183 295 -EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFS 341 (448)
Q Consensus 295 -~l~V~IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~ 341 (448)
.++|.||+|+++|++++++|+|.+...+...|||||+|+|.....+.
T Consensus 293 g~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~Ls 340 (376)
T PRK14280 293 GKVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVVVRVVTPTKLT 340 (376)
T ss_pred ceEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCC
Confidence 57899999999999999999999865555689999999999655443
No 78
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.21 E-value=3.3e-11 Score=123.64 Aligned_cols=109 Identities=28% Similarity=0.631 Sum_probs=80.6
Q ss_pred eeeCCCCCCCCccCC---------CccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC-cEEeceE----
Q 013183 229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---- 294 (448)
Q Consensus 229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---- 294 (448)
...|+.|+|+|.... ....+|+.|+|.|.+ +...|..|+|.|.+.+..-.++... |+..+.+
T Consensus 163 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~ 238 (380)
T PRK14276 163 PVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKE----IKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQ 238 (380)
T ss_pred CccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCcc----ccCCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEe
Confidence 467999999997531 125689999999987 4578999999998754333333322 2221111
Q ss_pred ----------------------------------------------------------EEEEEecCCCCCCCEEEECCCC
Q 013183 295 ----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAG 316 (448)
Q Consensus 295 ----------------------------------------------------------~l~V~IppG~~~G~~i~~~g~G 316 (448)
.++|.||+|+++|++++++|+|
T Consensus 239 G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~i~v~ip~g~~~g~~~~i~g~G 318 (380)
T PRK14276 239 GQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTGKKFRLRGKG 318 (380)
T ss_pred ccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCcEEEEECCCCCCCCEEEECCCC
Confidence 5789999999999999999999
Q ss_pred CCCCCCCCcccEEEEEEEecCCCcc
Q 013183 317 NAGGRGRQHGNLFIKLKVADDPIFS 341 (448)
Q Consensus 317 ~~~~~g~~~GDL~v~i~v~~h~~f~ 341 (448)
.+...+..+|||||+|+|.-...+.
T Consensus 319 ~p~~~~~~~GDL~V~~~v~~P~~l~ 343 (380)
T PRK14276 319 APKLRGGGNGDQHVTVNIVTPTKLN 343 (380)
T ss_pred cCCCCCCCCCCEEEEEEEECCCCCC
Confidence 9876555689999999999555443
No 79
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.21 E-value=3.3e-11 Score=123.48 Aligned_cols=118 Identities=25% Similarity=0.468 Sum_probs=86.6
Q ss_pred eeeCCCCCCCCccCC---------CccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeec--------------
Q 013183 229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCK-------------- 285 (448)
Q Consensus 229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~-------------- 285 (448)
...|+.|+|+|.... .....|+.|.|.|.. +...|..|.|.|.+.+..-.++.
T Consensus 160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~ 235 (374)
T PRK14293 160 PTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQV----IEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVS 235 (374)
T ss_pred CeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeE----eccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEc
Confidence 467999999997431 124689999999997 45689999999986542222221
Q ss_pred CCcEEe------ceE-------------------------------------------EEEEEecCCCCCCCEEEECCCC
Q 013183 286 GSGVVD------GVK-------------------------------------------EVKVTIPAGVDSGDTIRVPEAG 316 (448)
Q Consensus 286 g~G~~~------~~~-------------------------------------------~l~V~IppG~~~G~~i~~~g~G 316 (448)
|.|... +.- .++|.||+|+++|++++++|+|
T Consensus 236 g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~~~~g~~~ri~g~G 315 (374)
T PRK14293 236 GEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVLTLENKG 315 (374)
T ss_pred cCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCCCCCCCEEEECCCC
Confidence 111110 000 5789999999999999999999
Q ss_pred CCCCCC-CCcccEEEEEEEecCCCcccCCCceEEE
Q 013183 317 NAGGRG-RQHGNLFIKLKVADDPIFSRDGADVYVD 350 (448)
Q Consensus 317 ~~~~~g-~~~GDL~v~i~v~~h~~f~R~G~DL~~~ 350 (448)
.+...+ ...|||||+|+|..++.+++++.+|+..
T Consensus 316 ~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~ 350 (374)
T PRK14293 316 VPRLGNPVARGDHLITVKVKIPTRISDEERELLEK 350 (374)
T ss_pred CCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 986543 2579999999999998899888777544
No 80
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.19 E-value=4e-11 Score=122.80 Aligned_cols=116 Identities=26% Similarity=0.566 Sum_probs=84.2
Q ss_pred eeeeCCCCCCCCccCCC---------ccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC-cEEeceE---
Q 013183 228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (448)
Q Consensus 228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (448)
....|..|+|+|..... ....|+.|+|.|.. +...|..|.|.|.+.+..-.++... |+..+.+
T Consensus 156 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~ 231 (371)
T PRK14292 156 PPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQI----ITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRV 231 (371)
T ss_pred CCccCCCCCCccEEEEEEeccCceEEEeeecCCCccccee----cCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEE
Confidence 35789999999965311 24589999999987 4678999999997643222222111 1111111
Q ss_pred ---------------------------------------------------------EEEEEecCCCCCCCEEEECCCCC
Q 013183 295 ---------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGN 317 (448)
Q Consensus 295 ---------------------------------------------------------~l~V~IppG~~~G~~i~~~g~G~ 317 (448)
.++|.||+|+++|++++|+|+|+
T Consensus 232 ~G~G~~~~~~~GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~i~g~G~ 311 (371)
T PRK14292 232 AGMGNEGPGGNGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQHGDLHRLRGQGM 311 (371)
T ss_pred ecCcCCCCCCCCCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCEEEecCCCcCCCcEEEECCCCC
Confidence 35799999999999999999999
Q ss_pred CCCCCCCcccEEEEEEEecCCCcccCCCce
Q 013183 318 AGGRGRQHGNLFIKLKVADDPIFSRDGADV 347 (448)
Q Consensus 318 ~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL 347 (448)
+...+..+|||||+|+|..++.+..+...|
T Consensus 312 p~~~~~~~GDL~V~~~v~~P~~l~~~q~~l 341 (371)
T PRK14292 312 PRLQGAGTGDLIVEYEIAVPKQLSPEAREA 341 (371)
T ss_pred CCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence 876566789999999999888776555443
No 81
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.19 E-value=6e-11 Score=122.12 Aligned_cols=127 Identities=24% Similarity=0.510 Sum_probs=87.7
Q ss_pred EEeeeehhhhcccccceee--eceeeeCCCCCCCCccCCC---------ccccCCCccceeEEEeCCccccCCCcCCceE
Q 013183 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (448)
Q Consensus 207 ~~l~isl~e~~~G~~~~i~--~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (448)
.++.++-...+..|...-. -.....|+.|+|+|..... ....|+.|+|.|.+ ....|..|+|.|.
T Consensus 147 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 222 (386)
T PRK14289 147 KKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKI----IKKKCKKCGGEGI 222 (386)
T ss_pred EEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccc----cCcCCCCCCCCcE
Confidence 3445555555555543332 2345779999999975321 25689999999987 4578999999998
Q ss_pred EeeecceeecCC-cEEeceE------------------------------------------------------------
Q 013183 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (448)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (448)
+.+..-.++... |+..+.+
T Consensus 223 v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~l 302 (386)
T PRK14289 223 VYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTI 302 (386)
T ss_pred EeeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecC
Confidence 754322222211 1111111
Q ss_pred --EEEEEecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecC
Q 013183 295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADD 337 (448)
Q Consensus 295 --~l~V~IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h 337 (448)
.++|.||+|+++|++++++|+|.+...+...|||||+|+|+-.
T Consensus 303 dg~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P 347 (386)
T PRK14289 303 DGKAKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLVNVSVYIP 347 (386)
T ss_pred CceEEEEECCccCCCcEEEECCCCcCCCCCCCCCcEEEEEEEEeC
Confidence 6899999999999999999999986555678999999999843
No 82
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.18 E-value=9.7e-11 Score=120.30 Aligned_cols=108 Identities=29% Similarity=0.554 Sum_probs=80.8
Q ss_pred eeeCCCCCCCCccCC---------CccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC-cEEeceE----
Q 013183 229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---- 294 (448)
Q Consensus 229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---- 294 (448)
...|+.|+|+|.... .....|+.|+|.|.+ +...|..|+|.|.+.+..-...... |+..+.+
T Consensus 165 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~ 240 (380)
T PRK14297 165 PKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKV----IEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLR 240 (380)
T ss_pred CccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceE----cCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEe
Confidence 567999999996521 235689999999987 4578999999997654443444322 3222221
Q ss_pred ----------------------------------------------------------EEEEEecCCCCCCCEEEECCCC
Q 013183 295 ----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAG 316 (448)
Q Consensus 295 ----------------------------------------------------------~l~V~IppG~~~G~~i~~~g~G 316 (448)
.++|.||+|+++|++++++|+|
T Consensus 241 g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~~~v~ip~g~~~g~~~ri~g~G 320 (380)
T PRK14297 241 GQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQPGTVFRLKGKG 320 (380)
T ss_pred cCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCcEEEEECCCcCCCCEEEEcCCC
Confidence 5789999999999999999999
Q ss_pred CCCCCCCCcccEEEEEEEecCCCc
Q 013183 317 NAGGRGRQHGNLFIKLKVADDPIF 340 (448)
Q Consensus 317 ~~~~~g~~~GDL~v~i~v~~h~~f 340 (448)
.+...+...|||||+|+|.-...+
T Consensus 321 ~p~~~~~~~GDL~v~~~v~~P~~l 344 (380)
T PRK14297 321 VPRVNSTGRGNQYVTVIVDIPKKL 344 (380)
T ss_pred cCCCCCCCCCcEEEEEEEEcCCCC
Confidence 986555568999999999944433
No 83
>PHA02624 large T antigen; Provisional
Probab=99.17 E-value=2.4e-11 Score=128.30 Aligned_cols=60 Identities=28% Similarity=0.557 Sum_probs=56.2
Q ss_pred CCCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhh
Q 013183 81 KRDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144 (448)
Q Consensus 81 ~~~~y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Y 144 (448)
..++|++|||+++| +.+|||+|||++|++||||++++ +++|++|++||++|+|+.+|..|
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd----eekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD----EEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc----HHHHHHHHHHHHHHhcHHHhhhc
Confidence 45899999999999 99999999999999999999753 67999999999999999999999
No 84
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.16 E-value=1.5e-10 Score=119.14 Aligned_cols=127 Identities=27% Similarity=0.510 Sum_probs=85.7
Q ss_pred Eeeeehhhhcccccceee--eceeeeCCCCCCCCccCC-----CccccCCCccceeEEEeCCccccCCCcCCceEEeeec
Q 013183 208 ELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH 280 (448)
Q Consensus 208 ~l~isl~e~~~G~~~~i~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~ 280 (448)
++.++-...+.-|.-.-. -.....|+.|+|+|.... ....+|+.|+|+|.+ +...|..|.|.|.+.+..
T Consensus 160 ~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~~~~~~ 235 (389)
T PRK14295 160 PLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLI----ADDPCLVCKGSGRAKSSR 235 (389)
T ss_pred EEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEE----eccCCCCCCCCceEeeee
Confidence 444554444443332221 123467999999986421 235689999999998 457899999999875432
Q ss_pred ceeecCC-cEEeceE---------------------------------------------------------------EE
Q 013183 281 CMTCKGS-GVVDGVK---------------------------------------------------------------EV 296 (448)
Q Consensus 281 C~~C~g~-G~~~~~~---------------------------------------------------------------~l 296 (448)
-.+.... |+..+.+ .+
T Consensus 236 ~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~ 315 (389)
T PRK14295 236 TMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPV 315 (389)
T ss_pred EEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEE
Confidence 2222211 1111111 68
Q ss_pred EEEecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCCC
Q 013183 297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI 339 (448)
Q Consensus 297 ~V~IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~ 339 (448)
+|.||+|+++|++++++|+|.+.. +...|||||+|+|.-...
T Consensus 316 ~v~ip~g~~~g~~iri~G~G~p~~-~~~~GDL~i~~~v~~P~~ 357 (389)
T PRK14295 316 TVKLPPGTPNGRVLRVRGKGAVRK-DGTRGDLLVTVEVAVPKD 357 (389)
T ss_pred EEEECCccCCCcEEEECCCCcCCC-CCCCCCEEEEEEEECCCC
Confidence 999999999999999999999863 456899999999984443
No 85
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.15 E-value=1.7e-10 Score=118.57 Aligned_cols=126 Identities=30% Similarity=0.539 Sum_probs=85.4
Q ss_pred EEeeeehhhhcccccceee--eceeeeCCCCCCCCccCC-----CccccCCCccceeEEEeCCccccCCCcCCceEEeee
Q 013183 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (448)
Q Consensus 207 ~~l~isl~e~~~G~~~~i~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (448)
.++.++-...+..|.-.-. -.....|+.|+|+|.... .....|+.|+|.|.+ ...|..|+|.|.+.+.
T Consensus 149 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~-----~~~C~~C~G~g~v~~~ 223 (382)
T PRK14291 149 VSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVL-----REPCSKCNGRGLVIKK 223 (382)
T ss_pred EEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceEE-----ccCCCCCCCCceEEee
Confidence 3444444544443332221 123467999999996532 235689999999952 4689999999987543
Q ss_pred cceeecCC-cEEeceE---------------------------------------------------------------E
Q 013183 280 HCMTCKGS-GVVDGVK---------------------------------------------------------------E 295 (448)
Q Consensus 280 ~C~~C~g~-G~~~~~~---------------------------------------------------------------~ 295 (448)
.-.+.... |+..+.+ .
T Consensus 224 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~ 303 (382)
T PRK14291 224 ETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKK 303 (382)
T ss_pred eEEEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCE
Confidence 33333221 2211111 5
Q ss_pred EEEEecCCCCCCCEEEECCCCCCCCCCCCcccEEEEEEEecC
Q 013183 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADD 337 (448)
Q Consensus 296 l~V~IppG~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h 337 (448)
++|.||||+++|++++|+|+|++...+..+|||||+|+|.-.
T Consensus 304 l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~~~V~~P 345 (382)
T PRK14291 304 EKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVP 345 (382)
T ss_pred EEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeC
Confidence 899999999999999999999987655568999999999843
No 86
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.15 E-value=1e-10 Score=120.35 Aligned_cols=107 Identities=32% Similarity=0.641 Sum_probs=78.4
Q ss_pred eeeCCCCCCCCccCC---------CccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC-cEEeceE----
Q 013183 229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---- 294 (448)
Q Consensus 229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---- 294 (448)
...|+.|+|+|.... ....+|+.|+|.|.+ +...|..|+|+|.+.+..-.++... |+..+.+
T Consensus 172 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~ 247 (386)
T PRK14277 172 PVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKI----ITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLR 247 (386)
T ss_pred CccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceee----ccCCCCCCCCCcEEeeeeEEEEecCCCccCCcEEEEc
Confidence 467999999986421 124689999999998 4568999999998754333333221 1111111
Q ss_pred ----------------------------------------------------------EEEEEecCCCCCCCEEEECCCC
Q 013183 295 ----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAG 316 (448)
Q Consensus 295 ----------------------------------------------------------~l~V~IppG~~~G~~i~~~g~G 316 (448)
.++|.||+|+++|++++++|+|
T Consensus 248 g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~ri~g~G 327 (386)
T PRK14277 248 GEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEGTQTGTKFRLRGKG 327 (386)
T ss_pred cccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEECCCCCCCCEEEECCCC
Confidence 4688999999999999999999
Q ss_pred CCCCCCCCcccEEEEEEEecCCC
Q 013183 317 NAGGRGRQHGNLFIKLKVADDPI 339 (448)
Q Consensus 317 ~~~~~g~~~GDL~v~i~v~~h~~ 339 (448)
.+...+...|||||+|+|.-...
T Consensus 328 ~p~~~~~~~GDL~v~~~V~~P~~ 350 (386)
T PRK14277 328 IPHLRGRGRGDQIVKVYIEVPKK 350 (386)
T ss_pred CCCCCCCCCCCEEEEEEEEeCCC
Confidence 98655556799999999984433
No 87
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.13 E-value=1.1e-10 Score=119.39 Aligned_cols=129 Identities=20% Similarity=0.478 Sum_probs=85.0
Q ss_pred Eeeeehhhhcccccceeee--ceeeeCCCCCCCCccCCC---------ccccCCCccceeEEEeCCccccCCCcCCceEE
Q 013183 208 ELVLSFAEAAKGCTKHVSF--DAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (448)
Q Consensus 208 ~l~isl~e~~~G~~~~i~~--~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (448)
++.++-...+..|.-.-.- .....|+.|+|+|..... ...+|+.|+|.|.+ +...|+.|+|.|.+
T Consensus 143 ~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~----~~~~C~~C~G~g~v 218 (372)
T PRK14296 143 IIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKI----IKNKCKNCKGKGKY 218 (372)
T ss_pred EEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCccee----ecccccCCCCceEE
Confidence 4444444444444332221 234679999999975321 24689999999998 45689999999976
Q ss_pred eeecceeecCC-cEEeceE-------------------------------------------------------------
Q 013183 277 IKDHCMTCKGS-GVVDGVK------------------------------------------------------------- 294 (448)
Q Consensus 277 ~~~~C~~C~g~-G~~~~~~------------------------------------------------------------- 294 (448)
.+..-.++... |+..+.+
T Consensus 219 ~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tl 298 (372)
T PRK14296 219 LERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTL 298 (372)
T ss_pred EEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCC
Confidence 43222222211 1111111
Q ss_pred --EEEEEecCCCCCCCEEEECCCCCCCC-CCCCcccEEEEEEEecCCCc
Q 013183 295 --EVKVTIPAGVDSGDTIRVPEAGNAGG-RGRQHGNLFIKLKVADDPIF 340 (448)
Q Consensus 295 --~l~V~IppG~~~G~~i~~~g~G~~~~-~g~~~GDL~v~i~v~~h~~f 340 (448)
.++|.||+|+++|++++++|+|.+.. .+...|||||+|+|.-...+
T Consensus 299 dG~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~L 347 (372)
T PRK14296 299 DGDIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNL 347 (372)
T ss_pred CCCEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCC
Confidence 57899999999999999999999743 23457999999999954433
No 88
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.11 E-value=1.3e-10 Score=105.89 Aligned_cols=67 Identities=27% Similarity=0.421 Sum_probs=58.4
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 013183 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (448)
Q Consensus 82 ~~~y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~ 148 (448)
.|||++||+++. .+..+++++|++|++++|||+....++ +.+.-..||+||.+|+||.+|+.|=-..
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L 75 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIAL 75 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHh
Confidence 499999999985 899999999999999999999876543 3456779999999999999999997643
No 89
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.11 E-value=3.1e-10 Score=117.45 Aligned_cols=108 Identities=27% Similarity=0.565 Sum_probs=79.8
Q ss_pred eeeeCCCCCCCCccCC---------CccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC-cEEeceE---
Q 013183 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (448)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (448)
....|+.|+|+|.... ....+|+.|+|+|.++. ....|..|+|.|.+.+..-.++... |+..+.+
T Consensus 165 ~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~--~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~ 242 (421)
T PTZ00037 165 AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIP--ESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITF 242 (421)
T ss_pred CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceecc--ccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEE
Confidence 4568999999996321 23568999999998742 2468999999998765444444332 3322222
Q ss_pred -----------------------------------------------------------EEEEEecCC--CCCCCEEEEC
Q 013183 295 -----------------------------------------------------------EVKVTIPAG--VDSGDTIRVP 313 (448)
Q Consensus 295 -----------------------------------------------------------~l~V~IppG--~~~G~~i~~~ 313 (448)
.+.|.|||| +++|++++|+
T Consensus 243 ~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~ 322 (421)
T PTZ00037 243 HGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVIN 322 (421)
T ss_pred ecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeC
Confidence 589999999 9999999999
Q ss_pred CCCCCCCCC-CCcccEEEEEEEecC
Q 013183 314 EAGNAGGRG-RQHGNLFIKLKVADD 337 (448)
Q Consensus 314 g~G~~~~~g-~~~GDL~v~i~v~~h 337 (448)
|+|.+...+ ...|||||+|+|.-.
T Consensus 323 geGmP~~~~~~~rGDL~V~~~V~~P 347 (421)
T PTZ00037 323 NEGMPTYKSPFKKGNLYVTFEVIFP 347 (421)
T ss_pred CCCcccCCCCCCCCCEEEEEEEEcC
Confidence 999986443 357999999999844
No 90
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=99.10 E-value=5.2e-11 Score=91.51 Aligned_cols=57 Identities=49% Similarity=1.036 Sum_probs=44.7
Q ss_pred CCCCCCCCccCCCccccCCCccceeEEEeC--------CccccCCCcCCceEEe-eecceeecCCc
Q 013183 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRII-KDHCMTCKGSG 288 (448)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~-~~~C~~C~g~G 288 (448)
|+.|+|+|........+|+.|+|+|+++.. .++++|+.|+|+|+++ +++|++|+|.|
T Consensus 1 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~~~C~~C~G~g 66 (66)
T PF00684_consen 1 CPKCNGTGAKPGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEKDPCKTCKGSG 66 (66)
T ss_dssp -CCCTTTSB-STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TSSB-SSSTTSS
T ss_pred CCcCCCcccCCCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECCCCCCCCCCcC
Confidence 899999999888899999999999997642 2478999999999999 99999999975
No 91
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.10 E-value=1.3e-10 Score=119.24 Aligned_cols=106 Identities=32% Similarity=0.638 Sum_probs=77.0
Q ss_pred eeeCCCCCCCCccCC---------CccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC-cEEeceE----
Q 013183 229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---- 294 (448)
Q Consensus 229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---- 294 (448)
...|+.|+|+|.... ....+|+.|+|.|.. ....|..|+|+|.+.+.....+... |+..+.+
T Consensus 163 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~ 238 (378)
T PRK14283 163 VKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKI----VEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVS 238 (378)
T ss_pred CccCCCcCCccEEEEEEeccCceEEEEEECCCCCcccee----cCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEe
Confidence 467999999997531 124689999999987 3567999999998754333332221 1100000
Q ss_pred ----------------------------------------------------------EEEEEecCCCCCCCEEEECCCC
Q 013183 295 ----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAG 316 (448)
Q Consensus 295 ----------------------------------------------------------~l~V~IppG~~~G~~i~~~g~G 316 (448)
.++|.||+|+++|++++++|+|
T Consensus 239 g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~ri~g~G 318 (378)
T PRK14283 239 GEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTFRLKGHG 318 (378)
T ss_pred ccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEEEECCCC
Confidence 5789999999999999999999
Q ss_pred CCCCCCCCcccEEEEEEEecCC
Q 013183 317 NAGGRGRQHGNLFIKLKVADDP 338 (448)
Q Consensus 317 ~~~~~g~~~GDL~v~i~v~~h~ 338 (448)
.+...+...|||||+|+|.-..
T Consensus 319 ~p~~~~~~~GdL~v~~~v~~P~ 340 (378)
T PRK14283 319 MPSLRWSGKGNLYVKVKVVVPK 340 (378)
T ss_pred CCCCCCCCCCCEEEEEEEEeCC
Confidence 9865455679999999998443
No 92
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.09 E-value=6.8e-11 Score=118.51 Aligned_cols=69 Identities=33% Similarity=0.654 Sum_probs=63.3
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----ChhHHHHHHHHHHHHHHhhhhhhhhhhhhccc
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN-----NPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~-----~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~ 149 (448)
.-|||||||++.+++..|||++||+|..++||||.++ .++-+|++++|++||+.|+|...|..|-.||.
T Consensus 97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGt 170 (610)
T COG5407 97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGT 170 (610)
T ss_pred CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCC
Confidence 3599999999999999999999999999999999875 13578999999999999999999999999964
No 93
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=99.00 E-value=5.3e-10 Score=100.66 Aligned_cols=57 Identities=26% Similarity=0.435 Sum_probs=48.9
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCh-----hHHHHHHHHHHHHHHhhhhhhhhhhhhccc
Q 013183 93 NASQDEIKKAFHMLAKQYHPDANKNNP-----SAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (448)
Q Consensus 93 ~a~~~eIk~ayr~la~~~HPD~~~~~~-----~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~ 149 (448)
+.+..+|+++|++|++++|||+..+.+ .+.+.|+.||+||++|+||.+|+.|+....
T Consensus 2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~ 63 (157)
T TIGR00714 2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH 63 (157)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 357889999999999999999965432 266889999999999999999999998643
No 94
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.86 E-value=2.6e-09 Score=96.81 Aligned_cols=66 Identities=26% Similarity=0.527 Sum_probs=59.5
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhh
Q 013183 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYD 145 (448)
Q Consensus 80 ~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~Yd 145 (448)
-.-|+|++|.|.++.+.++||+.||+|+...|||+|+++ +.|...|.-|.+||..|-|+..|..-+
T Consensus 51 fnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~ 117 (250)
T KOG1150|consen 51 FNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCL 117 (250)
T ss_pred cccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 356999999999999999999999999999999999988 568899999999999999998655443
No 95
>PRK14299 chaperone protein DnaJ; Provisional
Probab=98.72 E-value=4e-08 Score=97.43 Aligned_cols=69 Identities=33% Similarity=0.579 Sum_probs=61.8
Q ss_pred cccCCCceEEEeecCHHHHhcCCEEEEeCCCC-eEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC
Q 013183 340 FSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 340 f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG-~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~ 416 (448)
+.|+|.||++++.|+|.||++|++++| +++| .++|+||+|+++|++++++|+|++. |||||+|+|.-+.
T Consensus 125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~-------GDL~v~i~v~~h~ 194 (291)
T PRK14299 125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG-------GDLYLVVRLLPHP 194 (291)
T ss_pred CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC-------CCEEEEEEEcCCC
Confidence 357899999999999999999999999 5677 4899999999999999999999862 9999999988654
No 96
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.67 E-value=1.8e-08 Score=95.27 Aligned_cols=70 Identities=36% Similarity=0.480 Sum_probs=61.0
Q ss_pred CCCCCcccccCCCC---CCCHHHHHHHHHHHHHHhCCCCC--CCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 013183 79 SSKRDPYELLGVPE---NASQDEIKKAFHMLAKQYHPDAN--KNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (448)
Q Consensus 79 ~~~~~~y~iLgv~~---~a~~~eIk~ayr~la~~~HPD~~--~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~ 148 (448)
....|+|.+|||+. .|++.+|.+|.++.+.+||||+. +++-...+.|+.|+.||+||+|+.+|..||..-
T Consensus 40 Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~d 114 (379)
T COG5269 40 WKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSND 114 (379)
T ss_pred hhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccc
Confidence 44589999999987 68899999999999999999997 223345789999999999999999999999853
No 97
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=98.62 E-value=8.4e-08 Score=76.75 Aligned_cols=47 Identities=28% Similarity=0.581 Sum_probs=36.3
Q ss_pred EEEEEEecCCCCCCCEEEECCCCCCCCCCC-CcccEEEEEEEecCCCc
Q 013183 294 KEVKVTIPAGVDSGDTIRVPEAGNAGGRGR-QHGNLFIKLKVADDPIF 340 (448)
Q Consensus 294 ~~l~V~IppG~~~G~~i~~~g~G~~~~~g~-~~GDL~v~i~v~~h~~f 340 (448)
++++|.||+|+++|+.++++|+|.+...+. ..|||+|+++|.-...+
T Consensus 27 ~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~l 74 (81)
T PF01556_consen 27 KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKL 74 (81)
T ss_dssp -EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SST
T ss_pred CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCC
Confidence 478899999999999999999999765555 79999999999844333
No 98
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.60 E-value=1.4e-07 Score=94.20 Aligned_cols=73 Identities=26% Similarity=0.511 Sum_probs=60.7
Q ss_pred cCCCceEEEeecCHHHHhcCCEEEE----eCCC--C--------eEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCcEE
Q 013183 342 RDGADVYVDSNISFTQAILGGKVDV----PTLS--G--------KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQY 407 (448)
Q Consensus 342 R~G~DL~~~~~I~l~eAl~G~~~~i----~tld--G--------~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~GDL~ 407 (448)
++|.||++.+.|+|.|++.|+.++| ++.+ | .++|+||+|+++|++++++|+|+|..+. ..+||||
T Consensus 115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~ 193 (306)
T PRK10266 115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENG-GPNGDLW 193 (306)
T ss_pred CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCC-CCCccEE
Confidence 5689999999999999999996555 4443 3 3689999999999999999999996532 2469999
Q ss_pred EEEEEECCC
Q 013183 408 VRFRVNFPT 416 (448)
Q Consensus 408 V~~~V~~P~ 416 (448)
|+|+|. |.
T Consensus 194 v~i~v~-ph 201 (306)
T PRK10266 194 LVIHIA-PH 201 (306)
T ss_pred EEEEEc-CC
Confidence 999998 65
No 99
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=98.38 E-value=2.8e-07 Score=77.47 Aligned_cols=56 Identities=39% Similarity=0.907 Sum_probs=46.2
Q ss_pred eeeeCCCCCCCCccCCCccccCCCccceeEEEeC-----CccccCCCcCCceEEeeecceeecCCcEEec
Q 013183 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP-----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDG 292 (448)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~ 292 (448)
..+.|..|+|+|. .+|+.|+|+|.+... +++.+|+.|+|+|+. .|..|+|.|++..
T Consensus 40 ~~v~C~~C~GsG~------~~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~---~C~~C~G~G~~~~ 100 (111)
T PLN03165 40 NTQPCFPCSGTGA------QVCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL---TCTTCQGSGIQPR 100 (111)
T ss_pred cCCCCCCCCCCCC------cCCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee---eCCCCCCCEEEee
Confidence 4578999999997 389999999987542 236799999999975 4999999998654
No 100
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.31 E-value=7.1e-07 Score=97.50 Aligned_cols=57 Identities=30% Similarity=0.483 Sum_probs=48.1
Q ss_pred CCCCCCCcccccCCCCC----CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhh
Q 013183 77 CYSSKRDPYELLGVPEN----ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136 (448)
Q Consensus 77 ~~~~~~~~y~iLgv~~~----a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~ 136 (448)
..++..+.|+||.++-+ -..+.||++|++||.+||||||+ +..++|..+|+|||.|+
T Consensus 1276 ~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP---EGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1276 ATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP---EGREMFERVNKAYELLS 1336 (2235)
T ss_pred CccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc---hHHHHHHHHHHHHHHHH
Confidence 34556789999998763 23478999999999999999985 56899999999999999
No 101
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.27 E-value=1.5e-06 Score=86.42 Aligned_cols=43 Identities=33% Similarity=0.449 Sum_probs=38.1
Q ss_pred EEEEEecCC--CCCCCEEEECCCCCCCCCCCCcccEEEEEEEecCC
Q 013183 295 EVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP 338 (448)
Q Consensus 295 ~l~V~IppG--~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~ 338 (448)
.+++.++|| +.+|++.+++|+|++..... .|||||.++|+-.+
T Consensus 280 ~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~-~g~lyi~~~v~fp~ 324 (337)
T KOG0712|consen 280 LLKLSSKPGEVISPGDTKRVEGEGMPIFRNP-KGDLYIKFEVKFPK 324 (337)
T ss_pred eEEEecCCCceeChhHEEeecCCCcccccCC-CCcEEEEEEEEcCC
Confidence 788999999 99999999999999987655 99999999998443
No 102
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.25 E-value=9.9e-07 Score=81.88 Aligned_cols=57 Identities=37% Similarity=0.675 Sum_probs=50.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHH-Hhhhh
Q 013183 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYE-TLRDS 138 (448)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~-vL~d~ 138 (448)
-+.+|.+|||..+|+.+|++.||..||+++|||...+ ....++|.+|.+||. ||+..
T Consensus 46 ~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~-~adaa~f~qideafrkvlq~~ 103 (342)
T KOG0568|consen 46 IMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE-EADAARFIQIDEAFRKVLQEK 103 (342)
T ss_pred HHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc-cccHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998864 445679999999998 88754
No 103
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=98.11 E-value=2.7e-06 Score=78.12 Aligned_cols=49 Identities=35% Similarity=0.659 Sum_probs=41.6
Q ss_pred cccCCCcCCceEEee--ecceeecCCcEEeceEEEEEEecCCCCCCCEEEEC
Q 013183 264 TSTCSTCKGLGRIIK--DHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVP 313 (448)
Q Consensus 264 ~~~C~~C~G~G~~~~--~~C~~C~g~G~~~~~~~l~V~IppG~~~G~~i~~~ 313 (448)
+.+|+.|+|+|++++ .+|++|+|.|.+..++++.+.+ .|+.+|++|++.
T Consensus 99 ~~~C~~C~G~G~~i~~~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~ 149 (186)
T TIGR02642 99 SCKCPRCRGTGLIQRRQRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK 149 (186)
T ss_pred CCcCCCCCCeeEEecCCCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence 346777777777776 6799999999999999999999 999999999875
No 104
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=97.81 E-value=8e-05 Score=80.64 Aligned_cols=70 Identities=50% Similarity=0.816 Sum_probs=65.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhcccCCC
Q 013183 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (448)
Q Consensus 82 ~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g~ 152 (448)
.|||++|||+++|+.++||+|||+||++||||++++ +.+.++|++|++||++|+||.+|+.||.++..+.
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~ 71 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHDGV 71 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccc
Confidence 599999999999999999999999999999999975 7788999999999999999999999999876553
No 105
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.69 E-value=5.7e-05 Score=62.17 Aligned_cols=61 Identities=26% Similarity=0.346 Sum_probs=49.8
Q ss_pred cCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhh
Q 013183 74 TGSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138 (448)
Q Consensus 74 ~~~~~~~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~ 138 (448)
...+.+..+..-.||||+++++.+.||+|+|++....|||+.+. |-- =.+||||+++|...
T Consensus 48 GF~~kMsr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGS-PYl---AsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 48 GFEPKMSRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGS-PYL---ASKINEAKDLLEGT 108 (112)
T ss_pred ccccccchHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCC-HHH---HHHHHHHHHHHhcc
Confidence 33445667788899999999999999999999999999999875 422 23599999999753
No 106
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.63 E-value=6.2e-05 Score=66.17 Aligned_cols=69 Identities=26% Similarity=0.456 Sum_probs=54.8
Q ss_pred CCCCCcccccCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCCh-----hHHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 013183 79 SSKRDPYELLGVPE--NASQDEIKKAFHMLAKQYHPDANKNNP-----SAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (448)
Q Consensus 79 ~~~~~~y~iLgv~~--~a~~~eIk~ayr~la~~~HPD~~~~~~-----~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~ 147 (448)
....+||.+||... ...+.-++.-|.-..+++|||+..... .|.+...++|+||.+|.||.+|+.|=.-
T Consensus 5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilk 80 (168)
T KOG3192|consen 5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLK 80 (168)
T ss_pred chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 34568999997654 456666777899999999999854321 3677899999999999999999999653
No 107
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=97.44 E-value=8.3e-05 Score=77.77 Aligned_cols=59 Identities=32% Similarity=0.769 Sum_probs=31.1
Q ss_pred eCCCCCCCCccCCCccccCCCccceeEEEeC-----------------CccccCCCcCCceEEe-eecceeecCCcEE
Q 013183 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP-----------------PFTSTCSTCKGLGRII-KDHCMTCKGSGVV 290 (448)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~-----------------~~~~~C~~C~G~G~~~-~~~C~~C~g~G~~ 290 (448)
.|+.|.|+|... .....|+.|+|+|..... .+..+|..|+|+|.+. -..|..|.|.|.+
T Consensus 4 ~C~~C~g~G~i~-v~~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v~~~c~~c~G~gkv 80 (715)
T COG1107 4 KCPECGGKGKIV-VGEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTVYDTCPECGGTGKV 80 (715)
T ss_pred cccccCCCceEe-eeeeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEEEeecccCCCceeE
Confidence 466666666532 223456666666653100 1134666666666654 3566666666543
No 108
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=97.32 E-value=0.00012 Score=56.11 Aligned_cols=44 Identities=32% Similarity=0.778 Sum_probs=31.6
Q ss_pred eeeeCCCCCCCCccCCC---------ccccCCCccceeEEEeCCccccCCCcCCce
Q 013183 228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLG 274 (448)
Q Consensus 228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G 274 (448)
....|+.|+|+|..... ....|+.|+|+|.++ ...+|+.|+|.|
T Consensus 14 ~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i---~~~~C~~C~G~g 66 (66)
T PF00684_consen 14 KPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII---EKDPCKTCKGSG 66 (66)
T ss_dssp T-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE----TSSB-SSSTTSS
T ss_pred CCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE---CCCCCCCCCCcC
Confidence 34689999999986432 356999999999983 268999999986
No 109
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.44 E-value=0.0027 Score=58.27 Aligned_cols=69 Identities=32% Similarity=0.526 Sum_probs=53.7
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhhhcccCC
Q 013183 83 DPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (448)
Q Consensus 83 ~~y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~d~~~R~~Yd~~~~~g 151 (448)
+++..+|..+.+ ..+.++..|+.+++.+|||+....+. +.+.+..++.||.+|.||.+|+.|=.....|
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~~g 77 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALADG 77 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhccc
Confidence 455566666643 44568999999999999999876543 3457889999999999999999997764433
No 110
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=96.43 E-value=0.0021 Score=54.29 Aligned_cols=41 Identities=34% Similarity=0.764 Sum_probs=32.3
Q ss_pred eCCCCCCCCccCC------CccccCCCccceeEEEeCCccccCCCcCCceEEee
Q 013183 231 PCDSCHGRGFPAD------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK 278 (448)
Q Consensus 231 ~C~~C~G~G~~~~------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~ 278 (448)
.|+.|+|+|.... .....|+.|+|.|.. .|..|.|+|.+.+
T Consensus 54 ~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~-------~C~~C~G~G~~~~ 100 (111)
T PLN03165 54 VCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL-------TCTTCQGSGIQPR 100 (111)
T ss_pred CCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee-------eCCCCCCCEEEee
Confidence 7999999987532 125689999999974 4999999998754
No 111
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]
Probab=96.18 E-value=0.0049 Score=60.30 Aligned_cols=61 Identities=33% Similarity=0.738 Sum_probs=34.8
Q ss_pred eeeCCCCCCCCccC--CCccccCCCccc-----------------eeEEEeCCccccCCCcCCceEEeeecceeecCCcE
Q 013183 229 FVPCDSCHGRGFPA--DAKTKICSTCRG-----------------IGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGV 289 (448)
Q Consensus 229 ~~~C~~C~G~G~~~--~~~~~~C~~C~G-----------------~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~ 289 (448)
...|+.|+|.|... ..+...|+.|-| +|.. .|++|.|.|. .+|.+|.|.|.
T Consensus 198 ~~vc~gc~g~G~~~y~~~~~m~c~sc~G~~~~k~gt~~~C~~C~G~G~~-------~C~tC~grG~---k~C~TC~gtgs 267 (406)
T KOG2813|consen 198 AMVCHGCSGSGSNSYGIGTPMHCMSCTGVPPPKIGTHDLCYMCHGRGIK-------ECHTCKGRGK---KPCTTCSGTGS 267 (406)
T ss_pred ceeccCcCCCCccccccCcceecccccCCCCCCCCccchhhhccCCCcc-------cCCcccCCCC---cccccccCccc
Confidence 45788888887421 122344554444 4432 4555555553 57888888877
Q ss_pred EeceEEEEEE
Q 013183 290 VDGVKEVKVT 299 (448)
Q Consensus 290 ~~~~~~l~V~ 299 (448)
+..-..+.|.
T Consensus 268 ll~~t~~vV~ 277 (406)
T KOG2813|consen 268 LLNYTRIVVY 277 (406)
T ss_pred eeeeEEEEEE
Confidence 6655444443
No 112
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=96.16 E-value=0.0043 Score=65.30 Aligned_cols=46 Identities=41% Similarity=0.928 Sum_probs=34.2
Q ss_pred eeeCCCCCCCCccCCCc------------------cccCCCccceeEEEeCCccccCCCcCCceEEe
Q 013183 229 FVPCDSCHGRGFPADAK------------------TKICSTCRGIGRVTIPPFTSTCSTCKGLGRII 277 (448)
Q Consensus 229 ~~~C~~C~G~G~~~~~~------------------~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~ 277 (448)
...|+.|+|+|....-. -..|+.|+|.|.+. ...+|+.|+|+|++.
T Consensus 18 ~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~---v~~~c~~c~G~gkv~ 81 (715)
T COG1107 18 EEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVT---VYDTCPECGGTGKVL 81 (715)
T ss_pred eeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEE---EEeecccCCCceeEE
Confidence 45699999998753211 23799999999875 356899999999875
No 113
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.00 E-value=0.0038 Score=57.30 Aligned_cols=54 Identities=43% Similarity=0.656 Sum_probs=46.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--h-----hHHHHHHHHHHHHHHh
Q 013183 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN--P-----SAKRKFQEIRDAYETL 135 (448)
Q Consensus 82 ~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~--~-----~a~~~f~~i~~Ay~vL 135 (448)
.+.|.+|++...++..+|+++|+++..++|||+-... + .+.+++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 6899999999999999999999999999999975321 2 3778899999999853
No 114
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=95.64 E-value=0.012 Score=54.31 Aligned_cols=30 Identities=37% Similarity=0.812 Sum_probs=15.8
Q ss_pred ccCCCccceeEEEeCCccccCCCcCCceEEee
Q 013183 247 KICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK 278 (448)
Q Consensus 247 ~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~ 278 (448)
..|+.|+|+|.+... ..+|+.|+|+|++..
T Consensus 100 ~~C~~C~G~G~~i~~--~~~C~~C~G~G~v~~ 129 (186)
T TIGR02642 100 CKCPRCRGTGLIQRR--QRECDTCAGTGRFRP 129 (186)
T ss_pred CcCCCCCCeeEEecC--CCCCCCCCCccEEee
Confidence 345555555554321 145666666666543
No 115
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]
Probab=95.12 E-value=0.013 Score=57.54 Aligned_cols=53 Identities=36% Similarity=0.818 Sum_probs=39.1
Q ss_pred eeCCCCCCCCccCCCccccCCCccceeEEE------e--C----------CccccCCCcCCceEEeeecceeecCCcEEe
Q 013183 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVT------I--P----------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVD 291 (448)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~------~--~----------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~ 291 (448)
..|..|.|.|. ..|+.|+|.|.-. + . .....|..|+|+|+ ..|.+|+|.|...
T Consensus 188 ~~ch~c~gRG~------~vc~gc~g~G~~~y~~~~~m~c~sc~G~~~~k~gt~~~C~~C~G~G~---~~C~tC~grG~k~ 258 (406)
T KOG2813|consen 188 TFCHACLGRGA------MVCHGCSGSGSNSYGIGTPMHCMSCTGVPPPKIGTHDLCYMCHGRGI---KECHTCKGRGKKP 258 (406)
T ss_pred hhhhcccCCCc------eeccCcCCCCccccccCcceecccccCCCCCCCCccchhhhccCCCc---ccCCcccCCCCcc
Confidence 56999999984 6899999999421 0 0 01457899999986 5799999988643
No 116
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=94.93 E-value=0.027 Score=59.23 Aligned_cols=46 Identities=20% Similarity=0.405 Sum_probs=35.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-------hHHHHHHHHHHHHHHh
Q 013183 90 VPENASQDEIKKAFHMLAKQYHPDANKNNP-------SAKRKFQEIRDAYETL 135 (448)
Q Consensus 90 v~~~a~~~eIk~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL 135 (448)
+..=.+.++|||+|||..+..||||-++.+ .+++.|..+++||+.-
T Consensus 396 ltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f 448 (453)
T KOG0431|consen 396 LTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKF 448 (453)
T ss_pred hhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence 344568999999999999999999987653 2566777777777643
No 117
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=92.48 E-value=0.34 Score=42.02 Aligned_cols=59 Identities=24% Similarity=0.280 Sum_probs=40.7
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhh
Q 013183 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141 (448)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R 141 (448)
+.-..-..||+|++.++.++|.+.|.+|-..-+|++.+. .-.=.+|..|.|.|....+.
T Consensus 55 Mtl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS----fYLQSKV~rAKErl~~El~~ 113 (127)
T PF03656_consen 55 MTLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGS----FYLQSKVFRAKERLEQELKE 113 (127)
T ss_dssp --HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-----HHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC----HHHHHHHHHHHHHHHHHHHH
Confidence 334567899999999999999999999999999998763 22223688899988765543
No 118
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=88.93 E-value=0.34 Score=47.01 Aligned_cols=36 Identities=31% Similarity=0.915 Sum_probs=20.4
Q ss_pred cCCCccceeEEEeCCccccCCCcCCceEEee--------ecceeecCCcEE
Q 013183 248 ICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK--------DHCMTCKGSGVV 290 (448)
Q Consensus 248 ~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~--------~~C~~C~g~G~~ 290 (448)
.|..|+|.+.+ +|..|+|+-++.. .+|..|+-.|.+
T Consensus 231 ~C~~CGg~rFl-------pC~~C~GS~kv~~~~~~~~~~~rC~~CNENGLv 274 (281)
T KOG2824|consen 231 VCESCGGARFL-------PCSNCHGSCKVHEEEEDDGGVLRCLECNENGLV 274 (281)
T ss_pred cCCCcCCcceE-------ecCCCCCceeeeeeccCCCcEEECcccCCCCce
Confidence 45555555554 4666666655543 456666655544
No 119
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=86.62 E-value=0.75 Score=45.67 Aligned_cols=76 Identities=21% Similarity=0.399 Sum_probs=46.2
Q ss_pred eeeceeeeCCCCCCCCccCC-----CccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCCcEEeceEEEEE
Q 013183 224 VSFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKV 298 (448)
Q Consensus 224 i~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V 298 (448)
........|..|.|.|.... ....+|..|+|.|.+.. ..|..|.|.|.+...+=..-..+..+....++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~----~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~ 251 (288)
T KOG0715|consen 176 EEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLR----DNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRF 251 (288)
T ss_pred ccccccccchhhhCcccccccccCCcceeecccccccceecc----chHHHhhcchhhhhheeEEeecCcccccccEEEE
Confidence 34456788999999993321 11237999999999843 3499999999654332222233333333344444
Q ss_pred EecCC
Q 013183 299 TIPAG 303 (448)
Q Consensus 299 ~IppG 303 (448)
..+..
T Consensus 252 ~~~~~ 256 (288)
T KOG0715|consen 252 AGHGN 256 (288)
T ss_pred ecCCc
Confidence 44443
No 120
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=84.31 E-value=0.83 Score=40.70 Aligned_cols=12 Identities=33% Similarity=0.827 Sum_probs=7.7
Q ss_pred ecceeecCCcEE
Q 013183 279 DHCMTCKGSGVV 290 (448)
Q Consensus 279 ~~C~~C~g~G~~ 290 (448)
.+|+.|+-.|.+
T Consensus 134 ~rC~~Cnengl~ 145 (147)
T cd03031 134 LRCPECNENGLV 145 (147)
T ss_pred EECCCCCccccc
Confidence 467777766654
No 121
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=79.75 E-value=4.9 Score=37.55 Aligned_cols=38 Identities=32% Similarity=0.472 Sum_probs=29.6
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhh
Q 013183 91 PENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136 (448)
Q Consensus 91 ~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~ 136 (448)
+++||.|||++|+.++..+|- +| ++.-.+|-.||+.+.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~-----gd---~~~~~~IEaAYD~IL 38 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYA-----GD---EKSREAIEAAYDAIL 38 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhc-----CC---HHHHHHHHHHHHHHH
Confidence 478999999999999999983 23 344456999998544
No 122
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=77.89 E-value=5.1 Score=34.01 Aligned_cols=46 Identities=17% Similarity=0.351 Sum_probs=34.3
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCChh----HHHHHHHHHHHHHHhhh
Q 013183 92 ENASQDEIKKAFHMLAKQYHPDANKNNPS----AKRKFQEIRDAYETLRD 137 (448)
Q Consensus 92 ~~a~~~eIk~ayr~la~~~HPD~~~~~~~----a~~~f~~i~~Ay~vL~d 137 (448)
+..+..+++.|.|.+-++.|||...+.|+ .++-++.++.-.+.|..
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~ 53 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKK 53 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhc
Confidence 34567889999999999999998887775 24456666666665553
No 123
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=77.62 E-value=2.2 Score=43.05 Aligned_cols=54 Identities=30% Similarity=0.442 Sum_probs=43.0
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCC----ChhHHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 013183 94 ASQDEIKKAFHMLAKQYHPDANKN----NPSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (448)
Q Consensus 94 a~~~eIk~ayr~la~~~HPD~~~~----~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~ 147 (448)
++..+|..+|+..+..+||++... ....++.|+.|.+||++|.+..+|...|..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~ 61 (335)
T KOG0724|consen 4 ASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSW 61 (335)
T ss_pred ccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhh
Confidence 567889999999999999998741 123567899999999999986666666654
No 124
>PF13446 RPT: A repeated domain in UCH-protein
Probab=73.53 E-value=5.8 Score=29.56 Aligned_cols=45 Identities=27% Similarity=0.578 Sum_probs=33.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhh
Q 013183 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD 137 (448)
Q Consensus 82 ~~~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d 137 (448)
.+.|+.|||+++++++.|-.+|+.... .+| .......+|..++.+
T Consensus 5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~--------~~P---~~~~~~r~AL~~Ia~ 49 (62)
T PF13446_consen 5 EEAYEILGIDEDTDDDFIISAFQSKVN--------DDP---SQKDTLREALRVIAE 49 (62)
T ss_pred HHHHHHhCcCCCCCHHHHHHHHHHHHH--------cCh---HhHHHHHHHHHHHHH
Confidence 367999999999999999999999876 122 133345666666664
No 125
>PRK14714 DNA polymerase II large subunit; Provisional
Probab=73.40 E-value=2.9 Score=48.67 Aligned_cols=72 Identities=19% Similarity=0.322 Sum_probs=43.4
Q ss_pred ehhhhc--------ccccceeeeceeeeCCCCCCCCccCCCccccCCCccceeEEEeCCccccCCCcCCce---EEeeec
Q 013183 212 SFAEAA--------KGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLG---RIIKDH 280 (448)
Q Consensus 212 sl~e~~--------~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G---~~~~~~ 280 (448)
++.+|+ .+...++.+. ...|+.|...... ..|+.|+..-.. ...|+.|+..= ......
T Consensus 643 ~I~kAa~~a~~~~d~~G~ieVEV~-~rkCPkCG~~t~~-----~fCP~CGs~te~-----vy~CPsCGaev~~des~a~~ 711 (1337)
T PRK14714 643 DVAKAAKHAPDMSDEGGVIEVEVG-RRRCPSCGTETYE-----NRCPDCGTHTEP-----VYVCPDCGAEVPPDESGRVE 711 (1337)
T ss_pred cHHHHHHhhhhccccCCeEEEEEE-EEECCCCCCcccc-----ccCcccCCcCCC-----ceeCccCCCccCCCcccccc
Confidence 466666 3333344443 5789999876432 389999886421 23799998741 111347
Q ss_pred ceeecCCcEEeceE
Q 013183 281 CMTCKGSGVVDGVK 294 (448)
Q Consensus 281 C~~C~g~G~~~~~~ 294 (448)
|+.|...-+-...+
T Consensus 712 CP~CGtplv~~~~~ 725 (1337)
T PRK14714 712 CPRCDVELTPYQRR 725 (1337)
T ss_pred CCCCCCcccccceE
Confidence 99998764444333
No 126
>smart00709 Zpr1 Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1. Also present in archaeal proteins.
Probab=72.89 E-value=4.6 Score=36.50 Aligned_cols=20 Identities=30% Similarity=0.393 Sum_probs=14.2
Q ss_pred EEEEEecCCCCCCCEEEECC
Q 013183 295 EVKVTIPAGVDSGDTIRVPE 314 (448)
Q Consensus 295 ~l~V~IppG~~~G~~i~~~g 314 (448)
++.++||||...|..-++.|
T Consensus 81 El~~ei~pg~~~g~itTVEG 100 (160)
T smart00709 81 ELDLEIPPGPLGGFITTVEG 100 (160)
T ss_pred eeeEEecCCCCCcEEEehHH
Confidence 56777788877777666654
No 127
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=72.79 E-value=2.4 Score=48.81 Aligned_cols=28 Identities=32% Similarity=0.735 Sum_probs=15.0
Q ss_pred cCCCccceeEEEeC-----CccccCCCcCCceE
Q 013183 248 ICSTCRGIGRVTIP-----PFTSTCSTCKGLGR 275 (448)
Q Consensus 248 ~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~ 275 (448)
.|+.|.|.|.+... ....+|+.|+|+.+
T Consensus 738 ~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~ 770 (924)
T TIGR00630 738 RCEACQGDGVIKIEMHFLPDVYVPCEVCKGKRY 770 (924)
T ss_pred CCCCCccceEEEEEccCCCCcccCCCCcCCcee
Confidence 46666666665432 12445666665554
No 128
>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]
Probab=71.14 E-value=3.2 Score=46.29 Aligned_cols=51 Identities=18% Similarity=0.400 Sum_probs=38.1
Q ss_pred eeeeCCCCCCCCccCCCccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC
Q 013183 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (448)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (448)
....|..|.- ...||.|...=......-.-.|..|+-. ..+...|+.|.+.
T Consensus 434 ~~l~C~~Cg~--------v~~Cp~Cd~~lt~H~~~~~L~CH~Cg~~-~~~p~~Cp~Cgs~ 484 (730)
T COG1198 434 PLLLCRDCGY--------IAECPNCDSPLTLHKATGQLRCHYCGYQ-EPIPQSCPECGSE 484 (730)
T ss_pred ceeecccCCC--------cccCCCCCcceEEecCCCeeEeCCCCCC-CCCCCCCCCCCCC
Confidence 3588999974 4689999887554444446789999877 4566799999875
No 129
>TIGR00310 ZPR1_znf ZPR1 zinc finger domain.
Probab=70.95 E-value=7 Score=36.41 Aligned_cols=20 Identities=20% Similarity=0.320 Sum_probs=14.4
Q ss_pred EEEEEecCC-CCCCCEEEECC
Q 013183 295 EVKVTIPAG-VDSGDTIRVPE 314 (448)
Q Consensus 295 ~l~V~IppG-~~~G~~i~~~g 314 (448)
.+.++|||| +..|..-++.|
T Consensus 80 El~lei~pg~~~~G~iTTVEG 100 (192)
T TIGR00310 80 ELGLDIEPGPTSGGFITNLEG 100 (192)
T ss_pred ceEEEECCCccCCceEEeeHh
Confidence 567778888 67777777754
No 130
>PRK04023 DNA polymerase II large subunit; Validated
Probab=69.97 E-value=3.5 Score=46.93 Aligned_cols=68 Identities=22% Similarity=0.322 Sum_probs=42.6
Q ss_pred ehhhhcc-cccceeeeceeeeCCCCCCCCccCCCccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCCcEE
Q 013183 212 SFAEAAK-GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVV 290 (448)
Q Consensus 212 sl~e~~~-G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~ 290 (448)
++.+|+. +...++.+. ...|+.|.-.+ ....||.|+..-. ....|+.|+-... ...|+.|...-..
T Consensus 609 ~i~~A~~~~g~~eVEVg-~RfCpsCG~~t-----~~frCP~CG~~Te-----~i~fCP~CG~~~~--~y~CPKCG~El~~ 675 (1121)
T PRK04023 609 DINKAAKYKGTIEVEIG-RRKCPSCGKET-----FYRRCPFCGTHTE-----PVYRCPRCGIEVE--EDECEKCGREPTP 675 (1121)
T ss_pred cHHHHHhcCCceeeccc-CccCCCCCCcC-----CcccCCCCCCCCC-----cceeCccccCcCC--CCcCCCCCCCCCc
Confidence 4667776 444444443 35699998764 3468999988621 2247999954432 3579999876433
Q ss_pred ec
Q 013183 291 DG 292 (448)
Q Consensus 291 ~~ 292 (448)
..
T Consensus 676 ~s 677 (1121)
T PRK04023 676 YS 677 (1121)
T ss_pred cc
Confidence 33
No 131
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=60.49 E-value=5.1 Score=46.28 Aligned_cols=28 Identities=32% Similarity=0.738 Sum_probs=15.4
Q ss_pred cCCCccceeEEEeC-----CccccCCCcCCceE
Q 013183 248 ICSTCRGIGRVTIP-----PFTSTCSTCKGLGR 275 (448)
Q Consensus 248 ~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~ 275 (448)
.|+.|.|.|.+... .+..+|+.|+|+..
T Consensus 740 ~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~ 772 (943)
T PRK00349 740 RCEACQGDGVIKIEMHFLPDVYVPCDVCKGKRY 772 (943)
T ss_pred CCCcccccceEEEEeccCCCccccCccccCccc
Confidence 47777777765432 12345666665554
No 132
>PRK14873 primosome assembly protein PriA; Provisional
Probab=58.81 E-value=8 Score=42.99 Aligned_cols=49 Identities=20% Similarity=0.449 Sum_probs=35.5
Q ss_pred eeeCCCCCCCCccCCCccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC
Q 013183 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (448)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (448)
...|..|.- ...|+.|.+.=......-.-.|..|+-.- ....|+.|.+.
T Consensus 383 ~l~C~~Cg~--------~~~C~~C~~~L~~h~~~~~l~Ch~CG~~~--~p~~Cp~Cgs~ 431 (665)
T PRK14873 383 SLACARCRT--------PARCRHCTGPLGLPSAGGTPRCRWCGRAA--PDWRCPRCGSD 431 (665)
T ss_pred eeEhhhCcC--------eeECCCCCCceeEecCCCeeECCCCcCCC--cCccCCCCcCC
Confidence 478999874 46899998865554333356799998753 46799999875
No 133
>TIGR00340 zpr1_rel ZPR1-related zinc finger protein. A model ZPR1_znf (TIGR00310) has been created to describe the domain shared by this protein and ZPR1.
Probab=58.17 E-value=11 Score=34.07 Aligned_cols=20 Identities=20% Similarity=0.340 Sum_probs=13.2
Q ss_pred EEEEEecCCC-CCCCEEEECC
Q 013183 295 EVKVTIPAGV-DSGDTIRVPE 314 (448)
Q Consensus 295 ~l~V~IppG~-~~G~~i~~~g 314 (448)
++.++||||. ..|..-++.|
T Consensus 78 El~lei~pg~~~~G~iTTVEG 98 (163)
T TIGR00340 78 ELGIKIEPGPASQGYISNIEG 98 (163)
T ss_pred ceeEEecCCCcCCceEEehHh
Confidence 5677777876 5666555644
No 134
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=57.13 E-value=4.6 Score=46.48 Aligned_cols=30 Identities=30% Similarity=0.577 Sum_probs=25.2
Q ss_pred ccCCCcCCceEEe---------eecceeecCCcEEeceE
Q 013183 265 STCSTCKGLGRII---------KDHCMTCKGSGVVDGVK 294 (448)
Q Consensus 265 ~~C~~C~G~G~~~---------~~~C~~C~g~G~~~~~~ 294 (448)
-.|+.|.|.|.+. ...|..|+|..+..+.-
T Consensus 737 G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l 775 (924)
T TIGR00630 737 GRCEACQGDGVIKIEMHFLPDVYVPCEVCKGKRYNRETL 775 (924)
T ss_pred CCCCCCccceEEEEEccCCCCcccCCCCcCCceeChHHH
Confidence 3599999999986 47999999998877653
No 135
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=57.09 E-value=6.3 Score=48.37 Aligned_cols=29 Identities=34% Similarity=0.659 Sum_probs=17.3
Q ss_pred cCCCccceeEEEeC-----CccccCCCcCCceEE
Q 013183 248 ICSTCRGIGRVTIP-----PFTSTCSTCKGLGRI 276 (448)
Q Consensus 248 ~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~ 276 (448)
.|+.|.|.|.+.+. .+..+|+.|+|+.+.
T Consensus 1609 rC~~C~G~G~i~i~m~fl~dv~~~C~~C~G~R~~ 1642 (1809)
T PRK00635 1609 QCSDCWGLGYQWIDRAFYALEKRPCPTCSGFRIQ 1642 (1809)
T ss_pred CCCCCccCceEEEecccCCCcccCCCCCCCcCCC
Confidence 47777777765432 235567777766553
No 136
>PF03833 PolC_DP2: DNA polymerase II large subunit DP2; InterPro: IPR016033 DP2 is the large subunit of a two-subunit novel archaebacterial replicative DNA polymerase first characterised for Pyrococcus furiosus. The structure of DP2 appears to be organised as a ~950 residue component separated from a ~300 residue component by a ~150 residue intein. The other subunit, DP1, has sequence similarity to the eukaryotic DNA polymerase delta small subunit. This entry represents the N-terminal ~950 residue component of DP2.; GO: 0003887 DNA-directed DNA polymerase activity; PDB: 3O59_X.
Probab=55.92 E-value=3.8 Score=45.88 Aligned_cols=52 Identities=19% Similarity=0.441 Sum_probs=0.0
Q ss_pred eeeCCCCCCCCccCCCccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCCcEEec
Q 013183 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDG 292 (448)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~ 292 (448)
...|+.|.-... ...|+.|++.-.. .-.|+.|+-. +....|+.|........
T Consensus 655 ~r~Cp~Cg~~t~-----~~~Cp~CG~~T~~-----~~~Cp~C~~~--~~~~~C~~C~~~~~~~~ 706 (900)
T PF03833_consen 655 RRRCPKCGKETF-----YNRCPECGSHTEP-----VYVCPDCGIE--VEEDECPKCGRETTSYS 706 (900)
T ss_dssp ----------------------------------------------------------------
T ss_pred cccCcccCCcch-----hhcCcccCCcccc-----ceeccccccc--cCccccccccccCcccc
Confidence 456888876543 4689989775432 2468888753 33568999987644333
No 137
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=53.24 E-value=13 Score=33.10 Aligned_cols=41 Identities=29% Similarity=0.613 Sum_probs=26.9
Q ss_pred eeCCCCCCCCccCCCccccCCCccceeEEEeCC-----ccccCCCcCCceEE
Q 013183 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIPP-----FTSTCSTCKGLGRI 276 (448)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~-----~~~~C~~C~G~G~~ 276 (448)
..|..|.|.++ ..|..|+|+=++.... ....|+.|+-.|-+
T Consensus 100 ~~C~~Cgg~rf------v~C~~C~Gs~k~~~~~~~~~~~~~rC~~Cnengl~ 145 (147)
T cd03031 100 GVCEGCGGARF------VPCSECNGSCKVFAENATAAGGFLRCPECNENGLV 145 (147)
T ss_pred CCCCCCCCcCe------EECCCCCCcceEEeccCcccccEEECCCCCccccc
Confidence 45888887765 4688888877664332 23578888776643
No 138
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=53.17 E-value=14 Score=36.25 Aligned_cols=47 Identities=32% Similarity=0.673 Sum_probs=35.8
Q ss_pred eeCCCCCCCCccCCCccccCCCccceeEEEeC----CccccCCCcCCceEEeeecceeec
Q 013183 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCK 285 (448)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~ 285 (448)
-.|..|.|.++ ..|..|+|+=++... ..-.+|..|+-.|-+. |+.|.
T Consensus 230 ~~C~~CGg~rF------lpC~~C~GS~kv~~~~~~~~~~~rC~~CNENGLvr---Cp~Cs 280 (281)
T KOG2824|consen 230 GVCESCGGARF------LPCSNCHGSCKVHEEEEDDGGVLRCLECNENGLVR---CPVCS 280 (281)
T ss_pred CcCCCcCCcce------EecCCCCCceeeeeeccCCCcEEECcccCCCCcee---CCccC
Confidence 57999998876 479999999887652 1246899999999864 66664
No 139
>TIGR00595 priA primosomal protein N'. All proteins in this family for which functions are known are components of the primosome which is involved in replication, repair, and recombination.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=52.81 E-value=10 Score=40.72 Aligned_cols=51 Identities=20% Similarity=0.324 Sum_probs=32.9
Q ss_pred eeeeCCCCCCCCccCCCccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC
Q 013183 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (448)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (448)
....|..|.- ...|+.|.+.=......-.-.|..|+-. ..+...|+.|.+.
T Consensus 212 ~~~~C~~Cg~--------~~~C~~C~~~l~~h~~~~~l~Ch~Cg~~-~~~~~~Cp~C~s~ 262 (505)
T TIGR00595 212 KNLLCRSCGY--------ILCCPNCDVSLTYHKKEGKLRCHYCGYQ-EPIPKTCPQCGSE 262 (505)
T ss_pred CeeEhhhCcC--------ccCCCCCCCceEEecCCCeEEcCCCcCc-CCCCCCCCCCCCC
Confidence 3467888875 3589999876554433334578888643 2234688888765
No 140
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=48.00 E-value=10 Score=19.76 Aligned_cols=13 Identities=46% Similarity=0.991 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHhh
Q 013183 124 KFQEIRDAYETLR 136 (448)
Q Consensus 124 ~f~~i~~Ay~vL~ 136 (448)
.|.++..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 5778888998774
No 141
>PRK12336 translation initiation factor IF-2 subunit beta; Provisional
Probab=46.87 E-value=45 Score=31.25 Aligned_cols=14 Identities=29% Similarity=0.662 Sum_probs=9.0
Q ss_pred eceeeeCCCCCCCC
Q 013183 226 FDAFVPCDSCHGRG 239 (448)
Q Consensus 226 ~~~~~~C~~C~G~G 239 (448)
+...+.|+.|+-.-
T Consensus 95 i~~yV~C~~C~~pd 108 (201)
T PRK12336 95 VDEYVICSECGLPD 108 (201)
T ss_pred HHheEECCCCCCCC
Confidence 34567888887543
No 142
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=46.59 E-value=25 Score=30.52 Aligned_cols=23 Identities=22% Similarity=0.354 Sum_probs=16.5
Q ss_pred eEEEEEEecCCCCCCCEEEECCC
Q 013183 293 VKEVKVTIPAGVDSGDTIRVPEA 315 (448)
Q Consensus 293 ~~~l~V~IppG~~~G~~i~~~g~ 315 (448)
...+++.-+.+++.||.+.+.-+
T Consensus 41 ~~~~~~~~~~~~~~GD~V~v~i~ 63 (135)
T PF04246_consen 41 PITFRAPNPIGAKVGDRVEVEIP 63 (135)
T ss_pred cEEEEecCCCCCCCCCEEEEEec
Confidence 35677777788888888877543
No 143
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=46.53 E-value=13 Score=42.90 Aligned_cols=33 Identities=36% Similarity=0.618 Sum_probs=26.1
Q ss_pred ccCCCcCCceEEe---------eecceeecCCcEEeceEEEE
Q 013183 265 STCSTCKGLGRII---------KDHCMTCKGSGVVDGVKEVK 297 (448)
Q Consensus 265 ~~C~~C~G~G~~~---------~~~C~~C~g~G~~~~~~~l~ 297 (448)
-.|+.|.|.|.+. ...|..|+|..+..+.-.++
T Consensus 739 G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~v~ 780 (943)
T PRK00349 739 GRCEACQGDGVIKIEMHFLPDVYVPCDVCKGKRYNRETLEVK 780 (943)
T ss_pred CCCCcccccceEEEEeccCCCccccCccccCccccccceEEE
Confidence 3599999999975 26999999998877654443
No 144
>PRK05580 primosome assembly protein PriA; Validated
Probab=46.46 E-value=14 Score=41.32 Aligned_cols=50 Identities=20% Similarity=0.424 Sum_probs=31.1
Q ss_pred eeeCCCCCCCCccCCCccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC
Q 013183 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (448)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (448)
...|..|.-. ..|+.|.+.=......-.-.|..|+.. ..+...|+.|.+.
T Consensus 381 ~~~C~~Cg~~--------~~C~~C~~~l~~h~~~~~l~Ch~Cg~~-~~~~~~Cp~Cg~~ 430 (679)
T PRK05580 381 FLLCRDCGWV--------AECPHCDASLTLHRFQRRLRCHHCGYQ-EPIPKACPECGST 430 (679)
T ss_pred ceEhhhCcCc--------cCCCCCCCceeEECCCCeEECCCCcCC-CCCCCCCCCCcCC
Confidence 5778888753 578888875433322234468888644 2334678888765
No 145
>PF14353 CpXC: CpXC protein
Probab=44.68 E-value=18 Score=31.04 Aligned_cols=12 Identities=33% Similarity=0.584 Sum_probs=8.6
Q ss_pred cccCCCcCCceE
Q 013183 264 TSTCSTCKGLGR 275 (448)
Q Consensus 264 ~~~C~~C~G~G~ 275 (448)
..+|+.|+....
T Consensus 38 ~~~CP~Cg~~~~ 49 (128)
T PF14353_consen 38 SFTCPSCGHKFR 49 (128)
T ss_pred EEECCCCCCcee
Confidence 567888877664
No 146
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=43.12 E-value=1.3e+02 Score=23.66 Aligned_cols=52 Identities=19% Similarity=0.206 Sum_probs=33.8
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHH----HHHHHHHHhhh
Q 013183 85 YELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQ----EIRDAYETLRD 137 (448)
Q Consensus 85 y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~----~i~~Ay~vL~d 137 (448)
-.+.|+.+.|+++||..|=.+.++|..=-..+. ....+.|. +|..|-.-|.|
T Consensus 6 ~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps-~an~eaF~~AV~eva~at~~LL~ 61 (78)
T PF10041_consen 6 KTLRNFEPPATDEEIRAAALQYVRKVSGFRKPS-AANAEAFDRAVAEVAAATRRLLD 61 (78)
T ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcc-hhhHHHHHHHHHHHHHHHHHHHH
Confidence 345688899999999999999999975333332 22344454 45555444443
No 147
>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.
Probab=43.08 E-value=14 Score=31.09 Aligned_cols=26 Identities=19% Similarity=0.585 Sum_probs=14.8
Q ss_pred eeeeCCCCCCCCccCCCccccCCCcc
Q 013183 228 AFVPCDSCHGRGFPADAKTKICSTCR 253 (448)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~ 253 (448)
.+.+|++|.-.-+--+..+.+||.|+
T Consensus 8 tKR~Cp~CG~kFYDLnk~PivCP~CG 33 (108)
T PF09538_consen 8 TKRTCPSCGAKFYDLNKDPIVCPKCG 33 (108)
T ss_pred CcccCCCCcchhccCCCCCccCCCCC
Confidence 34567776655555444555566653
No 148
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=42.71 E-value=18 Score=40.78 Aligned_cols=14 Identities=21% Similarity=0.451 Sum_probs=7.1
Q ss_pred ecceeecCCcEEec
Q 013183 279 DHCMTCKGSGVVDG 292 (448)
Q Consensus 279 ~~C~~C~g~G~~~~ 292 (448)
.+|..|+|+.+..+
T Consensus 754 v~CevC~GkRYn~E 767 (935)
T COG0178 754 VPCEVCHGKRYNRE 767 (935)
T ss_pred eeCCCcCCcccccc
Confidence 35555555554443
No 149
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=41.66 E-value=98 Score=24.15 Aligned_cols=29 Identities=17% Similarity=0.226 Sum_probs=25.2
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhC
Q 013183 83 DPYELLGVPENASQDEIKKAFHMLAKQYH 111 (448)
Q Consensus 83 ~~y~iLgv~~~a~~~eIk~ayr~la~~~H 111 (448)
|--+++++++.|++.||+.|-++.++++.
T Consensus 4 NIk~LfnfdPPAT~~EvrdAAlQfVRKlS 32 (88)
T COG5552 4 NIKELFNFDPPATPVEVRDAALQFVRKLS 32 (88)
T ss_pred chHHHhCCCCCCCcHHHHHHHHHHHHHhc
Confidence 44578899999999999999999998874
No 150
>PRK03564 formate dehydrogenase accessory protein FdhE; Provisional
Probab=38.69 E-value=30 Score=34.69 Aligned_cols=20 Identities=20% Similarity=0.793 Sum_probs=9.9
Q ss_pred cCCCcCCceEEeeecceeec
Q 013183 266 TCSTCKGLGRIIKDHCMTCK 285 (448)
Q Consensus 266 ~C~~C~G~G~~~~~~C~~C~ 285 (448)
.|..|.-.=...+..|+.|.
T Consensus 214 ~CslC~teW~~~R~~C~~Cg 233 (309)
T PRK03564 214 HCNLCESEWHVVRVKCSNCE 233 (309)
T ss_pred EcCCCCCcccccCccCCCCC
Confidence 35555444444455555554
No 151
>PF08792 A2L_zn_ribbon: A2L zinc ribbon domain; InterPro: IPR014900 This zinc ribbon protein is found associated with some viral A2L transcription factors [].
Probab=37.42 E-value=22 Score=23.19 Aligned_cols=10 Identities=50% Similarity=1.006 Sum_probs=4.2
Q ss_pred cCCCccceeE
Q 013183 248 ICSTCRGIGR 257 (448)
Q Consensus 248 ~C~~C~G~G~ 257 (448)
.|+.|++.|.
T Consensus 5 ~C~~C~~~~i 14 (33)
T PF08792_consen 5 KCSKCGGNGI 14 (33)
T ss_pred EcCCCCCCeE
Confidence 3444444443
No 152
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=34.46 E-value=30 Score=39.11 Aligned_cols=33 Identities=24% Similarity=0.546 Sum_probs=24.2
Q ss_pred ccCCCccceeEEEeC-----CccccCCCcCCceEEeee
Q 013183 247 KICSTCRGIGRVTIP-----PFTSTCSTCKGLGRIIKD 279 (448)
Q Consensus 247 ~~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~~~~ 279 (448)
-.|.+|.|-|.+.+. -+-.+|+.|+|+-+-.+.
T Consensus 731 GRCe~C~GdG~ikIeM~FLpdVyv~CevC~GkRYn~Et 768 (935)
T COG0178 731 GRCEACQGDGVIKIEMHFLPDVYVPCEVCHGKRYNRET 768 (935)
T ss_pred cCCccccCCceEEEEeccCCCceeeCCCcCCcccccce
Confidence 469999999986543 235789999999775543
No 153
>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300. Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.
Probab=33.57 E-value=26 Score=30.34 Aligned_cols=27 Identities=4% Similarity=0.089 Sum_probs=16.8
Q ss_pred eeeeCCCCCCCCccCCCccccCCCccc
Q 013183 228 AFVPCDSCHGRGFPADAKTKICSTCRG 254 (448)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G 254 (448)
.+.+|+.|.-.-+--+..+..||.|+-
T Consensus 8 tKr~Cp~cg~kFYDLnk~p~vcP~cg~ 34 (129)
T TIGR02300 8 TKRICPNTGSKFYDLNRRPAVSPYTGE 34 (129)
T ss_pred ccccCCCcCccccccCCCCccCCCcCC
Confidence 456677776665555555666666644
No 154
>PRK05978 hypothetical protein; Provisional
Probab=33.36 E-value=21 Score=31.84 Aligned_cols=8 Identities=50% Similarity=1.281 Sum_probs=3.9
Q ss_pred eecceeec
Q 013183 278 KDHCMTCK 285 (448)
Q Consensus 278 ~~~C~~C~ 285 (448)
.+.|+.|.
T Consensus 52 ~~~C~~CG 59 (148)
T PRK05978 52 VDHCAACG 59 (148)
T ss_pred CCCccccC
Confidence 34555554
No 155
>PRK12380 hydrogenase nickel incorporation protein HybF; Provisional
Probab=32.96 E-value=40 Score=28.52 Aligned_cols=37 Identities=24% Similarity=0.409 Sum_probs=17.1
Q ss_pred cccceee-eceeeeCCCCCCCCccCCCccccCCCcccee
Q 013183 219 GCTKHVS-FDAFVPCDSCHGRGFPADAKTKICSTCRGIG 256 (448)
Q Consensus 219 G~~~~i~-~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G 256 (448)
|+...+. ++....|..|........ ....||.|++..
T Consensus 59 gA~L~I~~vp~~~~C~~Cg~~~~~~~-~~~~CP~Cgs~~ 96 (113)
T PRK12380 59 GCDLHIVYKPAQAWCWDCSQVVEIHQ-HDAQCPHCHGER 96 (113)
T ss_pred CCEEEEEeeCcEEEcccCCCEEecCC-cCccCcCCCCCC
Confidence 4444443 345566777764332221 122355555443
No 156
>PRK14051 negative regulator GrlR; Provisional
Probab=31.98 E-value=1.4e+02 Score=25.03 Aligned_cols=70 Identities=9% Similarity=0.016 Sum_probs=38.6
Q ss_pred ccEEEEEEEecCCCcccCCCceEEEeecC--HHHHhcCCEEEEeCCCCeEEEEeCCCCCCCcEEEEcCCCCCC
Q 013183 326 GNLFIKLKVADDPIFSRDGADVYVDSNIS--FTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK 396 (448)
Q Consensus 326 GDL~v~i~v~~h~~f~R~G~DL~~~~~I~--l~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~l~g~G~p~ 396 (448)
-|+++.++-..|..-..-+-+--+.+.|+ +.+.-.|.++.-..-+.. ++.|..-++-=..+.|++-|||.
T Consensus 48 ~~iilhvhR~n~ei~SVf~~eqdy~L~i~kk~~sn~~~~~l~~HV~~Ne-kl~vdv~akFI~~LvI~~~~~~~ 119 (123)
T PRK14051 48 EDIILHVHRYNYEIPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNE-KLFVDVYAKFIEPLVIKNTGMPQ 119 (123)
T ss_pred ceeEEEEEecccccccccCccccEEEecchhheeCCCCeEEEEEEcCCc-EEEEEEeeeeeeeeEEccCCCcc
Confidence 45666666666665544444445566666 444444444443333332 34444333444578899999985
No 157
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=31.92 E-value=26 Score=38.81 Aligned_cols=49 Identities=18% Similarity=0.533 Sum_probs=32.5
Q ss_pred eeCCCCCCCCccCCCccccCCCccceeEEEeCCccccCCCcCCceEEeeecceeecCC
Q 013183 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (448)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (448)
..|+.|...- ....+-|+.|+..-. ...|+.|+-.-..-...|..|...
T Consensus 2 ~~Cp~Cg~~n---~~~akFC~~CG~~l~------~~~Cp~CG~~~~~~~~fC~~CG~~ 50 (645)
T PRK14559 2 LICPQCQFEN---PNNNRFCQKCGTSLT------HKPCPQCGTEVPVDEAHCPNCGAE 50 (645)
T ss_pred CcCCCCCCcC---CCCCccccccCCCCC------CCcCCCCCCCCCcccccccccCCc
Confidence 4689987542 233467999955431 246888877655556789999865
No 158
>PRK00564 hypA hydrogenase nickel incorporation protein; Provisional
Probab=31.29 E-value=56 Score=27.81 Aligned_cols=31 Identities=16% Similarity=0.398 Sum_probs=15.7
Q ss_pred ceeeeCCCCCCCCccCCCccccCCCccceeE
Q 013183 227 DAFVPCDSCHGRGFPADAKTKICSTCRGIGR 257 (448)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~ 257 (448)
+....|..|.-...........||.|++...
T Consensus 69 p~~~~C~~Cg~~~~~~~~~~~~CP~Cgs~~~ 99 (117)
T PRK00564 69 KVELECKDCSHVFKPNALDYGVCEKCHSKNV 99 (117)
T ss_pred CCEEEhhhCCCccccCCccCCcCcCCCCCce
Confidence 4567788887433222222223666665543
No 159
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=30.70 E-value=54 Score=20.41 Aligned_cols=16 Identities=19% Similarity=0.482 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHhC
Q 013183 96 QDEIKKAFHMLAKQYH 111 (448)
Q Consensus 96 ~~eIk~ayr~la~~~H 111 (448)
.++.|.+-|+.|+.||
T Consensus 10 ~~~~r~~lR~AALeYH 25 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYH 25 (28)
T ss_pred hHHHHHHHHHHHHHhc
Confidence 3778999999999999
No 160
>PF07295 DUF1451: Protein of unknown function (DUF1451); InterPro: IPR009912 This family consists of several hypothetical bacterial proteins of around 160 residues in length. Members of this family contain four highly conserved cysteine resides toward the C-terminal region of the protein. The function of this family is unknown.
Probab=29.93 E-value=53 Score=29.20 Aligned_cols=33 Identities=21% Similarity=0.392 Sum_probs=14.7
Q ss_pred CccccCCCccceeEEEeCCccccCCCcCCceEE
Q 013183 244 AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (448)
Q Consensus 244 ~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (448)
.....|..|+-.=....+..-.+|+.|++..+.
T Consensus 110 ~G~l~C~~Cg~~~~~~~~~~l~~Cp~C~~~~F~ 142 (146)
T PF07295_consen 110 PGTLVCENCGHEVELTHPERLPPCPKCGHTEFT 142 (146)
T ss_pred CceEecccCCCEEEecCCCcCCCCCCCCCCeee
Confidence 334456666443332221123356666655443
No 161
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=29.55 E-value=1.1e+02 Score=23.21 Aligned_cols=42 Identities=19% Similarity=0.249 Sum_probs=31.2
Q ss_pred HHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 013183 101 KAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (448)
Q Consensus 101 ~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~ 147 (448)
+..|...++-||+... .+..+.|.+.|..|++.++...+|..
T Consensus 14 ~~~r~~~~~~~p~~~~-----~eisk~l~~~Wk~ls~~eK~~y~~~a 55 (72)
T cd01388 14 KRHRRKVLQEYPLKEN-----RAISKILGDRWKALSNEEKQPYYEEA 55 (72)
T ss_pred HHHHHHHHHHCCCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4456666777888642 46778899999999998887766654
No 162
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=29.24 E-value=18 Score=44.54 Aligned_cols=29 Identities=38% Similarity=0.669 Sum_probs=24.0
Q ss_pred ccCCCcCCceEEe---------eecceeecCCcEEece
Q 013183 265 STCSTCKGLGRII---------KDHCMTCKGSGVVDGV 293 (448)
Q Consensus 265 ~~C~~C~G~G~~~---------~~~C~~C~g~G~~~~~ 293 (448)
-.|+.|.|.|.+. ...|..|+|..+..+.
T Consensus 1608 GrC~~C~G~G~i~i~m~fl~dv~~~C~~C~G~R~~~e~ 1645 (1809)
T PRK00635 1608 GQCSDCWGLGYQWIDRAFYALEKRPCPTCSGFRIQPLA 1645 (1809)
T ss_pred CCCCCCccCceEEEecccCCCcccCCCCCCCcCCCHHH
Confidence 3599999999874 3689999999887765
No 163
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length. The function of this family is unknown.
Probab=28.60 E-value=29 Score=33.32 Aligned_cols=10 Identities=0% Similarity=0.019 Sum_probs=6.4
Q ss_pred CcEEEEEEEE
Q 013183 404 GDQYVRFRVN 413 (448)
Q Consensus 404 GDL~V~~~V~ 413 (448)
.+++|++++.
T Consensus 202 H~i~l~~Q~T 211 (238)
T PF07092_consen 202 HNIVLHMQGT 211 (238)
T ss_pred EEEEEEEEEE
Confidence 6777776544
No 164
>PF09862 DUF2089: Protein of unknown function (DUF2089); InterPro: IPR018658 This family consists of various hypothetical prokaryotic proteins.
Probab=28.59 E-value=36 Score=28.92 Aligned_cols=20 Identities=25% Similarity=0.690 Sum_probs=14.9
Q ss_pred CCCcCCceEEeeecceeecC
Q 013183 267 CSTCKGLGRIIKDHCMTCKG 286 (448)
Q Consensus 267 C~~C~G~G~~~~~~C~~C~g 286 (448)
|+.|++.=.+.+-.|..|..
T Consensus 1 CPvCg~~l~vt~l~C~~C~t 20 (113)
T PF09862_consen 1 CPVCGGELVVTRLKCPSCGT 20 (113)
T ss_pred CCCCCCceEEEEEEcCCCCC
Confidence 66777777777778888874
No 165
>PF09297 zf-NADH-PPase: NADH pyrophosphatase zinc ribbon domain; InterPro: IPR015376 This domain has a zinc ribbon structure and is often found between two NUDIX domains.; GO: 0016787 hydrolase activity, 0046872 metal ion binding; PDB: 1VK6_A 2GB5_A.
Probab=27.00 E-value=47 Score=21.20 Aligned_cols=24 Identities=17% Similarity=0.602 Sum_probs=9.0
Q ss_pred cCCCccceeEEEeCCccccCCCcC
Q 013183 248 ICSTCRGIGRVTIPPFTSTCSTCK 271 (448)
Q Consensus 248 ~C~~C~G~G~~~~~~~~~~C~~C~ 271 (448)
-|+.|++.=......+..+|+.|+
T Consensus 5 fC~~CG~~t~~~~~g~~r~C~~Cg 28 (32)
T PF09297_consen 5 FCGRCGAPTKPAPGGWARRCPSCG 28 (32)
T ss_dssp B-TTT--BEEE-SSSS-EEESSSS
T ss_pred ccCcCCccccCCCCcCEeECCCCc
Confidence 355555544333223445555554
No 166
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=26.67 E-value=70 Score=27.31 Aligned_cols=42 Identities=33% Similarity=0.561 Sum_probs=30.5
Q ss_pred EEeCCCCCCCcEEEEcCCCCCCCC-----CCCCCCcEEEEEEEECCC
Q 013183 375 VKIPKGVQPGQLLVLRGKGLAKNG-----LFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 375 v~ip~g~~~g~~~~l~g~G~p~~~-----~~~~~GDL~V~~~V~~P~ 416 (448)
..||.+..+|+.+.|.|.=.+..+ -....+|+.++|++.|++
T Consensus 3 ~~lp~~l~~G~~i~i~G~~~~~~~~F~inl~~~~~di~lH~n~rf~~ 49 (128)
T smart00276 3 LPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTGGDDIALHFNPRFNE 49 (128)
T ss_pred ccCCCCCCCCCEEEEEEEECCCCCEEEEEeecCCCCEEEEEeccCCC
Confidence 467888999999999876544321 111237999999999986
No 167
>TIGR00100 hypA hydrogenase nickel insertion protein HypA. In Hpylori, hypA mutant abolished hydrogenase activity and decrease in urease activity. Nickel supplementation in media restored urease activity and partial hydrogenase activity. HypA probably involved in inserting Ni in enzymes.
Probab=25.88 E-value=66 Score=27.25 Aligned_cols=29 Identities=24% Similarity=0.543 Sum_probs=13.5
Q ss_pred ceeeeCCCCCCCCccCCCccccCCCcccee
Q 013183 227 DAFVPCDSCHGRGFPADAKTKICSTCRGIG 256 (448)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G 256 (448)
+....|..|.-.-... .....||.|++..
T Consensus 68 p~~~~C~~Cg~~~~~~-~~~~~CP~Cgs~~ 96 (115)
T TIGR00100 68 PVECECEDCSEEVSPE-IDLYRCPKCHGIM 96 (115)
T ss_pred CcEEEcccCCCEEecC-CcCccCcCCcCCC
Confidence 4456677776332211 1123455555443
No 168
>COG5216 Uncharacterized conserved protein [Function unknown]
Probab=25.09 E-value=66 Score=23.93 Aligned_cols=12 Identities=17% Similarity=0.440 Sum_probs=9.7
Q ss_pred Eeeeehhhhccc
Q 013183 208 ELVLSFAEAAKG 219 (448)
Q Consensus 208 ~l~isl~e~~~G 219 (448)
.++|+|+|+..|
T Consensus 30 RFeIsLeDl~~G 41 (67)
T COG5216 30 RFEISLEDLRNG 41 (67)
T ss_pred EeEEEHHHhhCC
Confidence 357899999887
No 169
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=24.81 E-value=1.4e+02 Score=21.49 Aligned_cols=43 Identities=12% Similarity=0.217 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 013183 100 KKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (448)
Q Consensus 100 k~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~ 147 (448)
.+.++.-.+.-|||.+ ..+..+.+.+.|..|+|.++...+|..
T Consensus 12 ~~~~~~~~~~~~~~~~-----~~~i~~~~~~~W~~l~~~~k~~y~~~a 54 (66)
T cd00084 12 SQEHRAEVKAENPGLS-----VGEISKILGEMWKSLSEEEKKKYEEKA 54 (66)
T ss_pred HHHHHHHHHHHCcCCC-----HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4556666777888844 256778899999999987776655553
No 170
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=24.64 E-value=1.4e+02 Score=21.70 Aligned_cols=40 Identities=18% Similarity=0.269 Sum_probs=28.8
Q ss_pred HHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 013183 103 FHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (448)
Q Consensus 103 yr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~ 147 (448)
.|.-.+.-||+.. ..+..+.|.+.|..|++.++....+..
T Consensus 15 ~r~~~~~~~p~~~-----~~~i~~~~~~~W~~ls~~eK~~y~~~a 54 (66)
T cd01390 15 QRPKLKKENPDAS-----VTEVTKILGEKWKELSEEEKKKYEEKA 54 (66)
T ss_pred HHHHHHHHCcCCC-----HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4455566788844 257788999999999987776655554
No 171
>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional
Probab=24.14 E-value=63 Score=22.42 Aligned_cols=7 Identities=29% Similarity=0.914 Sum_probs=3.5
Q ss_pred ccCCCcC
Q 013183 265 STCSTCK 271 (448)
Q Consensus 265 ~~C~~C~ 271 (448)
..|+.|+
T Consensus 22 ~~Cp~CG 28 (46)
T PRK00398 22 VRCPYCG 28 (46)
T ss_pred eECCCCC
Confidence 4455554
No 172
>PRK03681 hypA hydrogenase nickel incorporation protein; Validated
Probab=23.56 E-value=66 Score=27.23 Aligned_cols=19 Identities=32% Similarity=0.768 Sum_probs=9.8
Q ss_pred cccceeee-ceeeeCCCCCC
Q 013183 219 GCTKHVSF-DAFVPCDSCHG 237 (448)
Q Consensus 219 G~~~~i~~-~~~~~C~~C~G 237 (448)
|++..+.. +....|..|.-
T Consensus 59 gA~L~i~~~p~~~~C~~Cg~ 78 (114)
T PRK03681 59 GCKLHLEEQEAECWCETCQQ 78 (114)
T ss_pred CCEEEEEeeCcEEEcccCCC
Confidence 43433332 44566777763
No 173
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=23.30 E-value=81 Score=30.77 Aligned_cols=31 Identities=26% Similarity=0.373 Sum_probs=25.0
Q ss_pred EEeecCHHHHhcC-CEEEEeCCCCeE-EEEeCC
Q 013183 349 VDSNISFTQAILG-GKVDVPTLSGKV-QVKIPK 379 (448)
Q Consensus 349 ~~~~I~l~eAl~G-~~~~i~tldG~~-~v~ip~ 379 (448)
++..|-++||+.| +..+|++.|+.+ .+.|-|
T Consensus 18 YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTp 50 (311)
T KOG0315|consen 18 YDHTIRFWQALTGICSRTIQHPDSQVNRLEITP 50 (311)
T ss_pred CcceeeeeehhcCeEEEEEecCccceeeEEEcC
Confidence 3467889999999 789999999985 566654
No 174
>TIGR01562 FdhE formate dehydrogenase accessory protein FdhE. The only sequence scoring between trusted and noise is that from Aquifex aeolicus, which shows certain structural differences from the proteobacterial forms in the alignment. However it is notable that A. aeolicus also has a sequence scoring above trusted to the alpha subunit of formate dehydrogenase (TIGR01553).
Probab=23.27 E-value=76 Score=31.80 Aligned_cols=16 Identities=19% Similarity=0.079 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHhCCCC
Q 013183 99 IKKAFHMLAKQYHPDA 114 (448)
Q Consensus 99 Ik~ayr~la~~~HPD~ 114 (448)
.++.+.+|..++.|..
T Consensus 100 w~~~l~~LL~~l~~~~ 115 (305)
T TIGR01562 100 WLPWLDALLAGYPAPA 115 (305)
T ss_pred HHHHHHHHHHHhcccc
Confidence 4666777777776663
No 175
>PF03589 Antiterm: Antitermination protein; InterPro: IPR003222 This entry consists of antitermination proteins found in bacteriophages, such as protein Q from phage lambda, and some bacterial homologues. Protein Q positively regulates expression of the phage late gene operon by binding to the bacterial host RNA polymerase (RNAP) and modifying it. The modified RNAP transcribes through termination sites that otherwise prevent expression of the regulated genes [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent
Probab=22.64 E-value=33 Score=28.14 Aligned_cols=12 Identities=33% Similarity=0.816 Sum_probs=7.2
Q ss_pred ccCCCcCCceEE
Q 013183 265 STCSTCKGLGRI 276 (448)
Q Consensus 265 ~~C~~C~G~G~~ 276 (448)
..|..|.|.|..
T Consensus 33 k~c~rcgg~G~s 44 (95)
T PF03589_consen 33 KDCERCGGRGYS 44 (95)
T ss_pred hhhhhhcCCCCC
Confidence 456666666654
No 176
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length. The function of this family is unknown.
Probab=22.50 E-value=38 Score=32.57 Aligned_cols=10 Identities=60% Similarity=1.468 Sum_probs=4.8
Q ss_pred cCCCccceeE
Q 013183 248 ICSTCRGIGR 257 (448)
Q Consensus 248 ~C~~C~G~G~ 257 (448)
+||.|.|+|+
T Consensus 40 tCPTCqGtGr 49 (238)
T PF07092_consen 40 TCPTCQGTGR 49 (238)
T ss_pred cCCCCcCCcc
Confidence 4444444444
No 177
>PF01155 HypA: Hydrogenase expression/synthesis hypA family; InterPro: IPR000688 Bacterial membrane-bound nickel-dependent hydrogenases requires a number of accessory proteins which are involved in their maturation. The exact role of these proteins is not yet clear, but some seem to be required for the incorporation of the nickel ions []. One of these proteins is generally known as hypA. It is a protein of about 12 to 14 kDa that contains, in its C-terminal region, four conserved cysteines that form a zinc-finger like motif. Escherichia coli has two proteins that belong to this family, hypA and hybF. A homologue, MJ0214, has also been found in a number of archaeal species, including the genome of Methanocaldococcus jannaschii (Methanococcus jannaschii).; GO: 0016151 nickel ion binding, 0006464 protein modification process; PDB: 2KDX_A 3A44_D 3A43_B.
Probab=22.31 E-value=49 Score=27.94 Aligned_cols=29 Identities=21% Similarity=0.376 Sum_probs=12.0
Q ss_pred ceeeeCCCCCCCCccCCCccccCCCcccee
Q 013183 227 DAFVPCDSCHGRGFPADAKTKICSTCRGIG 256 (448)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G 256 (448)
+....|..|.......... ..||.|++..
T Consensus 68 p~~~~C~~Cg~~~~~~~~~-~~CP~Cgs~~ 96 (113)
T PF01155_consen 68 PARARCRDCGHEFEPDEFD-FSCPRCGSPD 96 (113)
T ss_dssp --EEEETTTS-EEECHHCC-HH-SSSSSS-
T ss_pred CCcEECCCCCCEEecCCCC-CCCcCCcCCC
Confidence 4456677776554332211 3455555544
No 178
>cd01389 MATA_HMG-box MATA_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include the fungal mating type gene products MC, MATA1 and Ste11.
Probab=22.20 E-value=1.7e+02 Score=22.45 Aligned_cols=43 Identities=12% Similarity=0.055 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 013183 100 KKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (448)
Q Consensus 100 k~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Yd~~ 147 (448)
.+.++..++.-||+... .+..+.|.+.|..|++.++...++..
T Consensus 13 ~~~~r~~~~~~~p~~~~-----~eisk~~g~~Wk~ls~eeK~~y~~~A 55 (77)
T cd01389 13 RQDKHAQLKTENPGLTN-----NEISRIIGRMWRSESPEVKAYYKELA 55 (77)
T ss_pred HHHHHHHHHHHCCCCCH-----HHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 45677788888998642 46778899999999987776555553
No 179
>PF14706 Tnp_DNA_bind: Transposase DNA-binding; PDB: 3ECP_A 4DM0_A 1MUS_A 1MUH_A 1MM8_A.
Probab=20.67 E-value=1.4e+02 Score=22.16 Aligned_cols=41 Identities=24% Similarity=0.451 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHH--hCCCCCCCChhHHHHHHHHHHHHHHhhhhh
Q 013183 97 DEIKKAFHMLAKQ--YHPDANKNNPSAKRKFQEIRDAYETLRDSE 139 (448)
Q Consensus 97 ~eIk~ayr~la~~--~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~ 139 (448)
.-+.+++.+++.. -||...- |.+-+...++..||+.|.+|.
T Consensus 15 ~Rl~~Rl~~l~~~la~~p~~Si--p~a~~~wa~tkaAYRF~~N~~ 57 (58)
T PF14706_consen 15 KRLTRRLVKLAESLAEKPGASI--PQACQDWAETKAAYRFFRNPR 57 (58)
T ss_dssp HHHHHHHHHHHHHHHHTTTS-H--HHHTT-HHHHHHHHHHHT-TT
T ss_pred chHHHHHHHHHHHHHHCCCCcc--chhccCHHHHHHHHHhhcCCC
Confidence 3477888888764 4777653 566667888999999998864
No 180
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=20.63 E-value=2.4e+02 Score=25.29 Aligned_cols=68 Identities=24% Similarity=0.242 Sum_probs=56.1
Q ss_pred ceEEEeecCHHHHhcCCEEEEeCCCCeE-EEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC
Q 013183 346 DVYVDSNISFTQAILGGKVDVPTLSGKV-QVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (448)
Q Consensus 346 DL~~~~~I~l~eAl~G~~~~i~tldG~~-~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~GDL~V~~~V~~P~ 416 (448)
++.....++..++..+....+....... .+.++.+...+..+++++.+.... ...|+.+.++.+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 218 (237)
T COG2214 150 DLAANLADNFEEALAGVKKAVARLLGKALKSTIKAGALEGKALRLKGLLKSAR---GALGKARLKELSKRHP 218 (237)
T ss_pred ceeeeeeccHHHHhcCcceeeeccccccccccCCcccccCceeeecccCCcCC---CCcccceeeeeccCCC
Confidence 6778888999999999988888877763 368999999999999999998765 2468999988877654
No 181
>PF07191 zinc-ribbons_6: zinc-ribbons; InterPro: IPR010807 This family consists of several short, hypothetical bacterial proteins of around 70 residues in length. Members of this family 8 highly conserved cysteine residues. The function of the family is unknown.; PDB: 2JRP_A 2JNE_A.
Probab=20.27 E-value=83 Score=24.36 Aligned_cols=40 Identities=15% Similarity=0.413 Sum_probs=14.9
Q ss_pred eCCCCCCCCccCCCccccCCCccceeEEEeCCccccCCCcCCceEE
Q 013183 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (448)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (448)
.||.|+.. .........|..|...=. ....|+.|+-.=.+
T Consensus 3 ~CP~C~~~-L~~~~~~~~C~~C~~~~~-----~~a~CPdC~~~Le~ 42 (70)
T PF07191_consen 3 TCPKCQQE-LEWQGGHYHCEACQKDYK-----KEAFCPDCGQPLEV 42 (70)
T ss_dssp B-SSS-SB-EEEETTEEEETTT--EEE-----EEEE-TTT-SB-EE
T ss_pred cCCCCCCc-cEEeCCEEECccccccce-----ecccCCCcccHHHH
Confidence 46666543 211223445666655322 23456666655444
No 182
>PF13719 zinc_ribbon_5: zinc-ribbon domain
Probab=20.08 E-value=56 Score=21.72 Aligned_cols=10 Identities=30% Similarity=0.866 Sum_probs=5.1
Q ss_pred eeCCCCCCCC
Q 013183 230 VPCDSCHGRG 239 (448)
Q Consensus 230 ~~C~~C~G~G 239 (448)
+.|+.|+..-
T Consensus 3 i~CP~C~~~f 12 (37)
T PF13719_consen 3 ITCPNCQTRF 12 (37)
T ss_pred EECCCCCceE
Confidence 4466555443
Done!