BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013184
(448 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC2A9.03 PE=4 SV=2
Length = 426
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 174/376 (46%), Gaps = 29/376 (7%)
Query: 66 DIQGIPWERLSI-TREKYRQTRLEQYKNYENIPQ-SGEGSEKECKPTKKGGKYYEFWRNT 123
D QGIPW +I R+ +R RL Y N S E + +YEF R
Sbjct: 66 DFQGIPWGNKAIGKRKNFRLYRLHTYSLSCNHSDWSPEELSLDTVQVAAEDSFYEFQRFL 125
Query: 124 RSVKSTILHFQLRNLVWSTSKHDVYLMSHFSIVHWSSLSSKRTEVLDVSGHVAPCEKHPG 183
++ H L V +H V +S+ SI ++L +++D+ ++
Sbjct: 126 KNPNCLRNHHHLCKSVKVVGEHSVIYVSNNSIRMENTLHDNSVQIIDLKNNI-------- 177
Query: 184 NLLEGFTQTQVSTLAVRDNLLIAGGFQGELICKYLDQPGVSFCSRTTYDENAITNAVEIY 243
+ +S L + + G G+ C + + G SF +R D++ N ++++
Sbjct: 178 -----LQKKAISCLDTTNAVGCLGTLYGQY-CIFNFKNG-SFSTRKLSDDS--INHIQLF 228
Query: 244 NSPSGGIHFMASNNDCGVRDFDMERFQLSKHFSFPWPVNHTSLSPDGKLLVIVGDNPEGI 303
+ F+ ND V D++R + VN L + L ++ D+ + +
Sbjct: 229 SEKK----FILGCNDGAVYVEDVQRTSPILVYRCSNAVNCVQLFDETPLALVCTDSKDAM 284
Query: 304 LVD--SQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKG 361
L+D S + A +P H D +WHP+G I ATG QD T +VWD+R L KS L
Sbjct: 285 LIDIRSNSVSAKLP---HSDSVLTGSWHPNGNILATGGQDTTAKVWDIRALGKSFRNLGS 341
Query: 362 NLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALF 421
+ A+ ++ F+ G +A+ E ADFV ++D K F Q IDFFGEI+G +S ++LF
Sbjct: 342 QMSAVTNLCFSPLGESLAVTEQADFVQLFDTK-LFNTSQVIDFFGEIAGTAYSSSGDSLF 400
Query: 422 IGVWDRTYGSLLQYNR 437
IGV D G +L++ R
Sbjct: 401 IGVDDPMLGGILEFRR 416
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 5/195 (2%)
Query: 236 ITNAVEIYNSPSGGIHFMASNNDCGVRDFDME--RFQLSKHFSFPWPVNHTSLSPDGKLL 293
+ N + SP G + + DC VR ++++ + L W V SPDG++L
Sbjct: 642 LGNILSAAFSPEGQL-LATCDTDCHVRVWEVKSGKLLLICRGHSNW-VRFVVFSPDGEIL 699
Query: 294 VIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLS 353
G + L + G I L GH F+ A+HPDG A+ + DKT ++WD+++
Sbjct: 700 ASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQD-G 758
Query: 354 KSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTF 413
+ L G+ +R + F+ DGN +A + + ++D G G + + F
Sbjct: 759 TCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAF 818
Query: 414 SPDTEALFIGVWDRT 428
S D + L G DRT
Sbjct: 819 SADGQTLASGSGDRT 833
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 246 PSGGIHFMASNNDCGVRDFDMERFQLSKHFS-FPWPVNHTSLSPDGKLLVIVGDNPEGIL 304
P G I + DC V+ +++ Q K S + + SPDG+LL + L
Sbjct: 1030 PQGKI-IATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRL 1088
Query: 305 VDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLG 364
D TG+ + L GH + +++ + P+G I AT + D+T ++WD + K + L G+
Sbjct: 1089 WDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQ-GKCLKTLTGHTN 1147
Query: 365 AIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIG- 423
+ I F+ DG +A A V ++D G I +S + FSPD E + G
Sbjct: 1148 WVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGS 1207
Query: 424 ------VWDRTYGSLLQYNRCR 439
+W+ G LQ R +
Sbjct: 1208 QDQTVRIWNVKTGECLQILRAK 1229
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 5/167 (2%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
V + PDG+ L + L D Q G + L GH D+ A+ PDG A+
Sbjct: 729 VFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAA 788
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D T ++WDV K + LK + G +RS+ F++DG +A + +++ G +
Sbjct: 789 DHTIKLWDVSQ-GKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKT 847
Query: 401 EIDFFGEISGMTFSPDTEALFIGVWDRTYGSLLQYNRCRNYTYLDTL 447
I + + +SPD++ L G DRT ++ C+ + + TL
Sbjct: 848 YIGHTNSVYSIAYSPDSKILVSGSGDRT----IKLWDCQTHICIKTL 890
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 8/161 (4%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
V + SPDG+ L V + L + +TG+ + G+ D++ A+ PD +I A+G+
Sbjct: 897 VCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSN 956
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
DKT ++WD + K ++ L+G+ I I F+ D +A A V +++ G +
Sbjct: 957 DKTVKLWDWQT-GKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQI 1015
Query: 401 EIDFFGEISGMTFSPDTEALFIG-------VWDRTYGSLLQ 434
++ + + F P + + G +W+ + G L+
Sbjct: 1016 LLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLK 1056
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Query: 284 TSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKT 343
+ SPD ++L ++ L D QTGK I L GH DF + A+ PD + A+ + D +
Sbjct: 942 VAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSS 1001
Query: 344 CRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEID 403
R+W++ + + +L + + ++ F G +A V +++ G + +
Sbjct: 1002 VRLWNI-STGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSE 1060
Query: 404 FFGEISGMTFSPDTEAL 420
+I GM +SPD + L
Sbjct: 1061 HSDKILGMAWSPDGQLL 1077
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 285 SLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTC 344
+ SP+G+LL + + + ++GK ++ GH ++ + PDG I A+ D+
Sbjct: 649 AFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCGADENV 708
Query: 345 RVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDF 404
++W VR+ + L G+ + S+ F DG +A A + ++D ++G +
Sbjct: 709 KLWSVRD-GVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGH 767
Query: 405 FGEISGMTFSPDTEALF-------IGVWDRTYGSLLQ 434
+ + FSPD L I +WD + G L+
Sbjct: 768 TDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLR 804
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 287 SPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRV 346
SPD K+LV + L D QT I L GH + + A+ PDG+ A + D++ R+
Sbjct: 861 SPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRL 920
Query: 347 WDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG---FEKEQEID 403
W+ R + + GN + F+ D +A V ++D + G E D
Sbjct: 921 WNCRT-GQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTD 979
Query: 404 FFGEISGMTFSPDTEALF-------IGVWDRTYGSLLQ 434
F I G+ FSPD++ L + +W+ + G Q
Sbjct: 980 F---IYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQ 1014
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 245 SPSGGIHFMASNNDCGVRDFDMERFQLSKHFS--FPWPVNHTSLSPDGKLLVIVGDNPEG 302
SP+G I + D V+ +D ++ + K + W V + SPDGK+L +
Sbjct: 1113 SPNGEI-IATCSTDQTVKIWDWQQGKCLKTLTGHTNW-VFDIAFSPDGKILASASHDQTV 1170
Query: 303 ILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRN 351
+ D TGK GH + A+ PDG + A+G+QD+T R+W+V+
Sbjct: 1171 RIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKT 1219
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 324 FASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEP 383
++A+ P+G++ AT + D RVW+V++ K + + +G+ +R + F+ DG +A
Sbjct: 646 LSAAFSPEGQLLATCDTDCHVRVWEVKS-GKLLLICRGHSNWVRFVVFSPDGEILASCGA 704
Query: 384 ADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALF-------IGVWDRTYGSLLQ 434
+ V ++ ++G + E+ + F PD E L I +WD G+ LQ
Sbjct: 705 DENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQ 762
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
V + SPDG L + L D GK + L H + + A+ DG+ A+G+
Sbjct: 771 VRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSG 830
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D+T ++W+ + + G+ ++ SI ++ D + + ++D + +
Sbjct: 831 DRTIKIWNYHT-GECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKT 889
Query: 401 EIDFFGEISGMTFSPDTEAL 420
E+ + FSPD + L
Sbjct: 890 LHGHTNEVCSVAFSPDGQTL 909
>sp|Q9D994|WDR38_MOUSE WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1
Length = 303
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 1/148 (0%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
VN ++ SPDG+ L+ D+ + +++G+ + L GH + + PDGR+ A+ +
Sbjct: 29 VNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSS 88
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D + R+WDV SK + VLKG+ ++ ++ F+ D +A V++ ++G
Sbjct: 89 DHSIRLWDVAR-SKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHL 147
Query: 401 EIDFFGEISGMTFSPDTEALFIGVWDRT 428
+ I FSP +++L G WD T
Sbjct: 148 LVGHCDSIQSSDFSPTSDSLATGSWDST 175
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 245 SPSGGIHFMASNNDCGVRDFDMERFQ----LSKHFSFPWPVNHTSLSPDGKLLVIVGDNP 300
SP G + +S++D +R +D+ R + L H V S SPD K L G +
Sbjct: 77 SPDGRL-IASSSSDHSIRLWDVARSKCLHVLKGHQR---SVETVSFSPDSKQLASGGWDK 132
Query: 301 EGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAV-- 358
I+ + Q+G+ + L GH D +S + P ATG+ D T +WD+R + V+
Sbjct: 133 RAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHN 192
Query: 359 LKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTE 418
L+G+ G I + +++ G +A + V+ Q ++ + FSPD
Sbjct: 193 LEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDEL 251
Query: 419 ALF-------IGVWDRTYGSLLQ 434
L + VWD G L+
Sbjct: 252 KLASAGYSRTVKVWDCLTGKCLE 274
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 13/191 (6%)
Query: 245 SPSGGIHFMASNNDC----GVRDFDMERFQLSKHFSFPWPVNHTSLSPDGKLLVIVGDNP 300
SP G AS++ C G + + ++L+ H PV SPDG+L+ +
Sbjct: 35 SPDGRTLLTASDDGCVYVWGTKSGRL-LWRLAGHRG---PVKSCCFSPDGRLIASSSSDH 90
Query: 301 EGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLK 360
L D K + L GH ++ PD + A+G DK VW+V++ + V +L
Sbjct: 91 SIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQS-GRRVHLLV 149
Query: 361 GNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDF---FGEISGMTFSPDT 417
G+ +I+S F+ + +A VH++D + + G IS + +S +
Sbjct: 150 GHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSA-S 208
Query: 418 EALFIGVWDRT 428
L G WD+T
Sbjct: 209 GLLASGSWDKT 219
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 269 FQLSKHFSFPWPVNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAW 328
QL H + VN + SPD L G + + D TGK + L G LD + A +
Sbjct: 232 LQLKGHTIW---VNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIF 288
Query: 329 HPDGRIFATG 338
PDG++ +G
Sbjct: 289 TPDGKLLVSG 298
Score = 32.7 bits (73), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 314 MPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTS 373
+ L GH + + A+ PD A+ +T +VWD K + LKG L + FT
Sbjct: 232 LQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLT-GKCLETLKGMLDVAHACIFTP 290
Query: 374 DGNFM 378
DG +
Sbjct: 291 DGKLL 295
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4
OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1
Length = 395
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 245 SPSGGIHFMASNN-DCGVR----DFDMERFQLSKHFSFPWPVNHTSLSPDGKLLVIVGDN 299
SP G +M S + DC ++ DF E+ + +N S S D KL+V D+
Sbjct: 116 SPDG--RYMGSGSADCSIKIWRMDFVYEKTLMGHRLG----INEFSWSSDSKLIVSCSDD 169
Query: 300 PEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVL 359
+ D +G+ + L GH ++ F ++P G + A+G+ D+T R+W RN ++ +
Sbjct: 170 KLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCARN-GNTIFSI 228
Query: 360 KGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEID-FFGEISGMTFSPDTE 418
G+ + S+ F DG ++A V ++D+ G + ID I+ + FSP+ +
Sbjct: 229 PGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGK 288
Query: 419 ALFIGVWDRTYGSLLQYNRCR 439
+ + T L Y + R
Sbjct: 289 YILASNLNNTL-KLWDYQKLR 308
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 7/206 (3%)
Query: 224 SFCSRTTYDENAITNAVEIYNSPSGGIHFMASNNDCGVRDFDMERFQLSKHFS-FPWPVN 282
+ T E + N +Y SP G + ++++D ++ +D QL + V
Sbjct: 1146 TLLKTITGHEQTVNN---VYFSPDGK-NLASASSDHSIKLWDTTSGQLLMTLTGHSAGVI 1201
Query: 283 HTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDK 342
SPDG+ + ++ L Q GK + L GH D+ + ++ PDG+ A+ + DK
Sbjct: 1202 TVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADK 1261
Query: 343 TCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEI 402
T ++W + + K V LKG+ ++ + F+SDG +A A + + +++ ++G E E
Sbjct: 1262 TIKLWRIAD-GKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWN-RHGIELETFT 1319
Query: 403 DFFGEISGMTFSPDTEALFIGVWDRT 428
G + + F PD+ + D T
Sbjct: 1320 GHSGGVYAVNFLPDSNIIASASLDNT 1345
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
VN + SPDGK L + L + GK L GH D F ++ PDG+I A+ +
Sbjct: 1449 VNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASA 1508
Query: 341 DKTCRVWD--VRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEK 398
DKT R+WD NL KS L + + S+ F DG+ +A V ++ + +G
Sbjct: 1509 DKTIRLWDSFSGNLIKS---LPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLL 1565
Query: 399 EQEIDFFGEISGMTFSPDTEALFIGVWDRT 428
+ +FSPD + D+T
Sbjct: 1566 HTFSGHSNVVYSSSFSPDGRYIASASEDKT 1595
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 289 DGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWD 348
DG ++ G + L SQ G + L G+ + ++ P G + A+ N DKT ++W
Sbjct: 1374 DGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAI-YGISFTPQGDLIASANADKTVKIWR 1432
Query: 349 VRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEI 408
VR+ K++ L G+ + + F+ DG +A A + V +++ +G K+ E+
Sbjct: 1433 VRD-GKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEV 1491
Query: 409 SGMTFSPDTEALF-------IGVWDRTYGSLLQ 434
++FSPD + + I +WD G+L++
Sbjct: 1492 FWVSFSPDGKIIASASADKTIRLWDSFSGNLIK 1524
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 271 LSKHFSFPWPVNHTSLSPDGKLLVIVG-DNPEGILVDSQTGKAIMPLCGHLDFSFASAWH 329
L H W VN +S DGK + DN I + ++ G + GH +A +
Sbjct: 1277 LKGHNDSVWDVNFSS---DGKAIASASRDNT--IKLWNRHGIELETFTGHSGGVYAVNFL 1331
Query: 330 PDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHV 389
PD I A+ + D T R+W R L + VL GN G + ++ F DG+ +A A + +
Sbjct: 1332 PDSNIIASASLDNTIRLWQ-RPLISPLEVLAGNSG-VYAVSFLHDGSIIATAGADGNIQL 1389
Query: 390 YDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVWDRTYGSLLQYNRCRNYTYLDTLL 448
+ +++G + + I G++F+P + + D+T ++ R R+ L TL+
Sbjct: 1390 WHSQDG-SLLKTLPGNKAIYGISFTPQGDLIASANADKT----VKIWRVRDGKALKTLI 1443
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 245 SPSGGIHFMASNNDCGVRDFDMERFQLSK----HFSFPWPVNHTSLSPDGKLLVIVGDNP 300
SP G I +++ D +R +D L K H + VN +PDG +L +
Sbjct: 1497 SPDGKI-IASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVN---FNPDGSMLASTSADK 1552
Query: 301 EGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLK 360
L S G + GH + ++S++ PDGR A+ ++DKT ++W + + L
Sbjct: 1553 TVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQIDG--HLLTTLP 1610
Query: 361 GNLGAIRSIRFTSDGNFM 378
+ + S F+ DG +
Sbjct: 1611 QHQAGVMSAIFSPDGKTL 1628
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 16/186 (8%)
Query: 251 HFMASNNDCGVRDFDMERFQ-LSKHFSFPWPVNHTSLSPDGKLLVIVGDNPEGILVDSQT 309
+ ++S+ D VR + ++ F L + +PV T SP G V G + L +
Sbjct: 558 YLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDH 617
Query: 310 GKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSI 369
+ + GHL + +HP+ ATG+ D+T R+WDV N V + G+ G I S+
Sbjct: 618 YQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLN-GNCVRIFTGHKGPIHSL 676
Query: 370 RFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMT-------FSPDTEALFI 422
F+ +G F+A V ++D +G GE+ G T FS D E L
Sbjct: 677 TFSPNGRFLATGATDGRVLLWDIGHGL-------MVGELKGHTDTVCSLRFSRDGEILAS 729
Query: 423 GVWDRT 428
G D T
Sbjct: 730 GSMDNT 735
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
Query: 249 GIHFMASNNDCGVRDFDMERFQLSKHFSFPWP-VNHTSLSPDGKLLVIVGDNPEGILVDS 307
G +F++ +D R + + +Q + F+ VN T P+ + + L D
Sbjct: 598 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDV 657
Query: 308 QTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIR 367
G + GH + + P+GR ATG D +WD+ + V LKG+ +
Sbjct: 658 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH-GLMVGELKGHTDTVC 716
Query: 368 SIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVW 425
S+RF+ DG +A + V ++DA FE + DF + +++ L +G +
Sbjct: 717 SLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTY 774
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 8/161 (4%)
Query: 280 PVNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGN 339
PV S SPD L+ ++ L QT ++ GH + + + P G F +G
Sbjct: 546 PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 605
Query: 340 QDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKE 399
D+ R+W + + + + G+L + R+ + N++A V ++D NG
Sbjct: 606 HDRVARLWATDHY-QPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVR 664
Query: 400 QEIDFFGEISGMTFSPDTEALFIG-------VWDRTYGSLL 433
G I +TFSP+ L G +WD +G ++
Sbjct: 665 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMV 705
Score = 32.0 bits (71), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 21/124 (16%)
Query: 331 DGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVY 390
D + A G D T RVW V +RS++ SD + + +
Sbjct: 482 DSSLIAGGFADSTVRVWSV------------TPKKLRSVKQASDLSLIDKESDDVLERIM 529
Query: 391 DAKNGFEKEQEIDFFGEISGMTFSPDTEALF-------IGVWD-RTYGSLLQYNRCRNYT 442
D K E + G + G +FSPD L + +W +T+ L+ Y + NY
Sbjct: 530 DEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY-KGHNYP 588
Query: 443 YLDT 446
DT
Sbjct: 589 VWDT 592
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
V + SPDG+ + D+ + D+ +G L GH + A+ PDG+ A+G+
Sbjct: 928 VQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSG 987
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
DKT ++WD + L+G+ G++ S+ F+ DG +A + ++D +G +
Sbjct: 988 DKTIKIWDTAS-GTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQT 1046
Query: 401 EIDFFGEISGMTFSPDTEALFIG-------VWDRTYGSLLQ 434
G + + FSPD + + G +WD G+ Q
Sbjct: 1047 LEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQ 1087
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
V SPDG+ + D+ + D+ +G L GH D ++ A+ PDG+ A+G+
Sbjct: 1054 VQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSI 1113
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D T ++WD + L+G+ G + S+ F+ DG +A + ++DA +G +
Sbjct: 1114 DGTIKIWDAAS-GTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQT 1172
Query: 401 EIDFFGEISGMTFSPDTEALFIG-------VWDRTYGSLLQ 434
G + + FSPD + + G +WD G+ Q
Sbjct: 1173 LEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQ 1213
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
V + S DG+ + D+ + D+ +G L GH ++ A+ PD A+G+
Sbjct: 844 VLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSD 903
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
DKT ++WD + L+G+ G ++S+ F+ DG +A + ++DA +G +
Sbjct: 904 DKTIKIWDAAS-GTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQT 962
Query: 401 EIDFFGEISGMTFSPDTEALFIG-------VWDRTYGSLLQ 434
+ + FSPD + + G +WD G+ Q
Sbjct: 963 LEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQ 1003
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
V+ + SPDG+ + + + D+ +G L GH + + A+ PDG+ A+G+
Sbjct: 1138 VHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS 1197
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG 395
DKT ++WD + L+G+ G ++S+ F+ DG +A + + ++D +G
Sbjct: 1198 DKTIKIWDTAS-GTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTASG 1251
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 304 LVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNL 363
+V+++ L GH + A+ DG+ A+G+ DKT ++WD + L+G+
Sbjct: 825 VVEAEWNACTQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTAS-GTGTQTLEGHG 883
Query: 364 GAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIG 423
G++ S+ F+ D +A + ++DA +G + G + + FSPD + + G
Sbjct: 884 GSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASG 943
Query: 424 -------VWDRTYGSLLQ 434
+WD G+ Q
Sbjct: 944 SDDHTIKIWDAASGTCTQ 961
Score = 39.7 bits (91), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
V + SPDG+ + + + D+ +G L GH + + A+ PDG+ A+G+
Sbjct: 1180 VQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS 1239
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTS 373
D T ++WD + + + + G+ S +T+
Sbjct: 1240 DNTIKIWDTASGTCTQTLNVGSTATCLSFDYTN 1272
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 89/191 (46%), Gaps = 16/191 (8%)
Query: 245 SPSGGIHFMASNNDCGVRDFDM----ERFQLSKHFSFPWPVNHTSLSPDGKLLVIVGDNP 300
SP G + + ++D VR +D+ ER H + V + SPDG ++ +
Sbjct: 510 SPDGAL-LASGSDDATVRLWDVAAAEERAVFEGHTHY---VLDIAFSPDGSMVASGSRDG 565
Query: 301 EGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLK 360
L + TG L GH D+ +A A+ PDG + A+G++D T R+WDV K VL+
Sbjct: 566 TARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVAT-GKERDVLQ 624
Query: 361 GNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGE---ISGMTFSPDT 417
+ S+ F+ DG+ + VH++D +G E F G + + FSPD
Sbjct: 625 APAENVVSLAFSPDGSMLVHGS-DSTVHLWDVASG---EALHTFEGHTDWVRAVAFSPDG 680
Query: 418 EALFIGVWDRT 428
L G DRT
Sbjct: 681 ALLASGSDDRT 691
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 7/160 (4%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
V + SPDG LL D+ L D + GH + A+ PDG + A+G++
Sbjct: 504 VRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSR 563
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D T R+W+V ++ AVLKG+ + ++ F+ DG+ +A + ++D G E++
Sbjct: 564 DGTARLWNVATGTEH-AVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDV 622
Query: 401 EIDFFGEISGMTFSPDTEALFIG------VWDRTYGSLLQ 434
+ + FSPD L G +WD G L
Sbjct: 623 LQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALH 662
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 285 SLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTC 344
+ SPDG +LV G + L D +G+A+ GH D+ A A+ PDG + A+G+ D+T
Sbjct: 634 AFSPDGSMLVH-GSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTI 692
Query: 345 RVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMA 381
R+WDV + L+G+ + S+ F +G +A A
Sbjct: 693 RLWDVAAQEEHT-TLEGHTEPVHSVAFHPEGTTLASA 728
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 306 DSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGA 365
D +G + L GH D+ A A+ PDG + A+G+ D T R+WDV ++ AV +G+
Sbjct: 487 DVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDV-AAAEERAVFEGHTHY 545
Query: 366 IRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVW 425
+ I F+ DG+ +A +++ G E + + FSPD + G
Sbjct: 546 VLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSR 605
Query: 426 DRT 428
D T
Sbjct: 606 DGT 608
Score = 40.0 bits (92), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Query: 238 NAVEIYNSPSGGIHFMASNNDCGVRDFDMERFQLSKHFS--FPWPVNHTSLSPDGKLLVI 295
N V + SP G + + +D V +D+ + F W V + SPDG LL
Sbjct: 629 NVVSLAFSPDGSM--LVHGSDSTVHLWDVASGEALHTFEGHTDW-VRAVAFSPDGALLAS 685
Query: 296 VGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDV 349
D+ L D + L GH + + A+HP+G A+ ++D T R+W +
Sbjct: 686 GSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIWPI 739
Score = 32.7 bits (73), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 323 SFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAE 382
+ A A+ P G + A G+ DK VWDV + + L+G+ +R++ F+ DG +A
Sbjct: 462 AVAVAFSPGGSLLAGGSGDKLIHVWDVAS-GDELHTLEGHTDWVRAVAFSPDGALLASGS 520
Query: 383 PADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVWDRT 428
V ++D E+ + + FSPD + G D T
Sbjct: 521 DDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGT 566
>sp|Q5JTN6|WDR38_HUMAN WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1
Length = 314
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
VN ++ SPDG++L+ ++ ++++G+ + L GH + PDG +FA+ +
Sbjct: 24 VNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFASASC 83
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D T R+WDV +K + VLKG+ ++ ++ F+ D +A V ++D ++G
Sbjct: 84 DCTVRLWDVAR-AKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQMLRL 142
Query: 401 EIDFFGEISGMTFSPDTEALFIGVWDRT 428
+ I FSP L G WD T
Sbjct: 143 LVGHRDSIQSSDFSPTVNCLATGSWDST 170
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Query: 245 SPSGGIHFMASNNDCGVRDFDMERFQLSKHF-SFPWPVNHTSLSPDGKLLVIVGDNPEGI 303
SP G + F +++ DC VR +D+ R + + V S SPD + L G + +
Sbjct: 72 SPDGHL-FASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVM 130
Query: 304 LVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVA--VLKG 361
L D Q+G+ + L GH D +S + P ATG+ D T +WD+R ++ +V+ L+G
Sbjct: 131 LWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEG 190
Query: 362 NLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEAL- 420
+ I + +++ G +A +H++ Q + + FSPD L
Sbjct: 191 HSANISCLCYSASG-LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLA 249
Query: 421 ------FIGVWDRTYGSLLQ 434
+ VWD G L+
Sbjct: 250 SAGYSRMVKVWDCNTGKCLE 269
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 7/188 (3%)
Query: 245 SPSGGIHFMASNNDCGVRDFDMERFQLSKHFS-FPWPVNHTSLSPDGKLLVIVGDNPEGI 303
SP G + S + C V ++ QL PV SPDG L +
Sbjct: 30 SPDGQMLLTGSEDGC-VYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFASASCDCTVR 88
Query: 304 LVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNL 363
L D K + L GH ++ PD R A+G DK +WDV++ + + +L G+
Sbjct: 89 LWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQS-GQMLRLLVGHR 147
Query: 364 GAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGE---ISGMTFSPDTEAL 420
+I+S F+ N +A VH++D + G IS + +S + L
Sbjct: 148 DSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCLCYSA-SGLL 206
Query: 421 FIGVWDRT 428
G WD+T
Sbjct: 207 ASGSWDKT 214
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 269 FQLSKHFSFPWPVNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAW 328
QL H ++ V + SPD L G + + D TGK + L G LD + A+
Sbjct: 227 IQLKGHVTW---VKSIAFSPDELWLASAGYSRMVKVWDCNTGKCLETLKGVLDVAHTCAF 283
Query: 329 HPDGRIFATGNQDKTCR 345
PDG+I +G D+T R
Sbjct: 284 TPDGKILVSGAADQTRR 300
Score = 36.6 bits (83), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 309 TGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRS 368
T ++ L GH+ + + A+ PD A+ + +VWD N K + LKG L +
Sbjct: 222 TSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWDC-NTGKCLETLKGVLDVAHT 280
Query: 369 IRFTSDGNFM 378
FT DG +
Sbjct: 281 CAFTPDGKIL 290
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 16/186 (8%)
Query: 251 HFMASNNDCGVRDFDMERFQ-LSKHFSFPWPVNHTSLSPDGKLLVIVGDNPEGILVDSQT 309
+ ++S+ D VR + ++ F L + +PV T SP G V G + L +
Sbjct: 557 YLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDH 616
Query: 310 GKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSI 369
+ + GHL + +HP+ ATG+ D+T R+WDV N V + G+ G I S+
Sbjct: 617 YQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN-GNCVRIFTGHKGPIHSL 675
Query: 370 RFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMT-------FSPDTEALFI 422
F+ +G F+A V ++D +G GE+ G T FS D E L
Sbjct: 676 TFSPNGRFLATGATDGRVLLWDIGHGL-------MVGELKGHTDTVCSLRFSRDGEILAS 728
Query: 423 GVWDRT 428
G D T
Sbjct: 729 GSMDNT 734
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
Query: 249 GIHFMASNNDCGVRDFDMERFQLSKHFSFPWP-VNHTSLSPDGKLLVIVGDNPEGILVDS 307
G +F++ +D R + + +Q + F+ VN T P+ + + L D
Sbjct: 597 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 656
Query: 308 QTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIR 367
G + GH + + P+GR ATG D +WD+ + V LKG+ +
Sbjct: 657 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH-GLMVGELKGHTDTVC 715
Query: 368 SIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVW 425
S+RF+ DG +A + V ++DA FE + DF + +++ L +G +
Sbjct: 716 SLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTY 773
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 8/161 (4%)
Query: 280 PVNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGN 339
PV S SPD L+ ++ L QT ++ GH + + + P G F +G
Sbjct: 545 PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 604
Query: 340 QDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKE 399
D+ R+W + + + + G+L + RF + N++A V ++D NG
Sbjct: 605 HDRVARLWATDHY-QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 663
Query: 400 QEIDFFGEISGMTFSPDTEALFIG-------VWDRTYGSLL 433
G I +TFSP+ L G +WD +G ++
Sbjct: 664 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMV 704
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 249 GIHFMASNNDCGVRDFDMERFQLSKHFSFPWPVNHTS------LSPDGKLLVIVGDNPEG 302
G + ++D VR +D+ Q K F HTS SP+ +L +
Sbjct: 918 GKMLASGSDDQTVRLWDISSGQCLKTFK-----GHTSRVRSVVFSPNSLMLASGSSDQTV 972
Query: 303 ILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGN 362
L D +G+ + GH + ++ A++ DG + ATG+ D+T R+WD+ + S+ + +G+
Sbjct: 973 RLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISS-SQCFYIFQGH 1031
Query: 363 LGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFI 422
+RS+ F+SDG +A V ++D +G + + FSPD L
Sbjct: 1032 TSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLAS 1091
Query: 423 G-------VWDRTYGSLL 433
G +WD + G+ L
Sbjct: 1092 GGDDQIVRLWDISSGNCL 1109
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
VN +PDG +L + L D + K + GH ++ + A++PDG + A+G+
Sbjct: 1245 VNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSG 1304
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D+T R+W++ + SK + +G+ + S+ F+ DG +A V ++ +G E
Sbjct: 1305 DQTVRLWEISS-SKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSG---EC 1360
Query: 401 EIDFFGE---ISGMTFSPDTEALFIGVWDRT 428
F G + + FSPD L G D+T
Sbjct: 1361 LYTFLGHTNWVGSVIFSPDGAILASGSGDQT 1391
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 104/247 (42%), Gaps = 13/247 (5%)
Query: 186 LEGFTQTQVSTLAVRDNLLIAGGFQGELICKYLDQPGVSFCSRTTYDENAITNAVEIYNS 245
L+G T S + D ++A G +++ + G Y T+ V
Sbjct: 1070 LQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSG-----NCLYTLQGYTSWVRFLVF 1124
Query: 246 PSGGIHFMASNNDCGVRDFDMER----FQLSKHFSFPWPVNHTSLSPDGKLLVIVGDNPE 301
G+ ++D VR +D+ + L H ++ VN + SPDG L +
Sbjct: 1125 SPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNW---VNAVAFSPDGATLASGSGDQT 1181
Query: 302 GILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKG 361
L D + K + L GH + + ++PDG A+G+ D+T R+W++ N SK + +G
Sbjct: 1182 VRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEI-NSSKCLCTFQG 1240
Query: 362 NLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALF 421
+ + S+ F DG+ +A V ++D + ++ + F+PD L
Sbjct: 1241 HTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLA 1300
Query: 422 IGVWDRT 428
G D+T
Sbjct: 1301 SGSGDQT 1307
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
V SPDG +L + L +GK + L GH ++ + + PDG + A+G+
Sbjct: 1371 VGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSD 1430
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG 395
D+T R+W++ + + + L G++ ++RS+ F+SDG +A + + ++D K G
Sbjct: 1431 DQTVRLWNISS-GECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTG 1484
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
V+ + SPDG +L D+ L +G+ + GH ++ + + PDG I A+G+
Sbjct: 1329 VSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSG 1388
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG 395
D+T R+W + + K + L+G+ + SI F+ DG +A V +++ +G
Sbjct: 1389 DQTVRLWSISS-GKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSG 1442
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
VN S DGK+L D+ L D +G+ + GH + + P+ + A+G+
Sbjct: 909 VNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSS 968
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYD 391
D+T R+WD+ + + + + +G+ G + S+ F DG+ +A V ++D
Sbjct: 969 DQTVRLWDISS-GECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWD 1018
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 242 IYNSPSGGIHFMASNND-----CGVRDFDMERFQLSKHFSFPWPVNHTS------LSPDG 290
I+ +G ++ +A N D G D + + +S F HTS S DG
Sbjct: 985 IFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDG 1044
Query: 291 KLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVR 350
+L D+ L D +G + L GH + + PDG + A+G D+ R+WD+
Sbjct: 1045 AMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDIS 1104
Query: 351 NLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGE--- 407
+ + L+G +R + F+ +G +A V ++D + K+ G
Sbjct: 1105 S-GNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISS---KKCLYTLQGHTNW 1160
Query: 408 ISGMTFSPDTEALFIGVWDRT 428
++ + FSPD L G D+T
Sbjct: 1161 VNAVAFSPDGATLASGSGDQT 1181
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 245 SPSGGIHFMASNNDCGVRDFDMER----FQLSKHFSFPWPVNHTSLSPDGKLLVIVGDNP 300
SP G I + + D VR + + + L H ++ V SPDG LL D+
Sbjct: 1377 SPDGAI-LASGSGDQTVRLWSISSGKCLYTLQGHNNW---VGSIVFSPDGTLLASGSDDQ 1432
Query: 301 EGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRN 351
L + +G+ + L GH++ + A+ DG I A+G+ D+T ++WDV+
Sbjct: 1433 TVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKT 1483
>sp|P87229|YC03_SCHPO Uncharacterized protein C4G3.03 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC4G3.03 PE=4 SV=1
Length = 347
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 20/197 (10%)
Query: 253 MASNNDCGVRDFDMERFQLSKHFSFPWPVNHTSLSPDGKLLVIVGDNPEGILVD-SQTGK 311
+ S+ND ++ D+E L K FP +NH S+S DG+ +V VGD+P+ + ++G+
Sbjct: 133 LISSNDHTIKVVDLEHGLLRKQLHFPVNMNHASVSNDGRFMVCVGDSPQVFFYEIDRSGE 192
Query: 312 AIM---PLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNL----G 364
+ + D SF ++ +FA +QD + V+DVR L + + G
Sbjct: 193 YHLRHTTVADTTDSSFCTSISQRNELFAVASQDSSLSVFDVRYLRTPMLTKTSSRPDPNG 252
Query: 365 AIRSIRFTSDG----NFMAMAEPADFVHVYDAKNGFEKE----QEIDFFG----EISGMT 412
+IRS FT + + +E + H+ D + G + E E FF +I G
Sbjct: 253 SIRSCHFTPPNGGPLDLLLYSEGFSYSHLLDLRTGKDVELVLPSEDRFFSPASQDIFGSC 312
Query: 413 FSPDTEALFIGVWDRTY 429
F+ D ++++ Y
Sbjct: 313 FADDGSSVYVASATHLY 329
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 20/219 (9%)
Query: 235 AITNAVEIYNSPSGGIHFMASNNDCGVRDFDMER----FQLSKHFSFPWPVNHTSLSPDG 290
A T V + G + +++D ++ + + R F L++H ++ V SPDG
Sbjct: 100 AHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINW---VRCAKFSPDG 156
Query: 291 KLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVR 350
+L+V D+ L D + + I C H F +HP G A D T +VWD+R
Sbjct: 157 RLIVSASDDKTIKLWDKTSRECIHSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIR 216
Query: 351 NLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISG 410
++K + + + G + S+ F GN++ A + V D G G ++
Sbjct: 217 -MNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTS 275
Query: 411 MTFSPDTEALFIG-------VW-----DRTYGSLLQYNR 437
+ FS + E G VW +Y LL+Y +
Sbjct: 276 VKFSREGEFFASGGSDEQVMVWKTNFDSASYADLLKYRQ 314
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 316 LCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDG 375
GH D + + P G + A+ ++DKT R+W V ++ V K + G +RS+ F+ DG
Sbjct: 56 FVGHKDAILSVDFSPSGHLIASASRDKTVRLW-VPSVKGESTVFKAHTGTVRSVSFSGDG 114
Query: 376 NFMAMAEPADFVHVYDA---KNGFEKEQEIDFFGEISGMTFSPDTEALF-------IGVW 425
+ A + V+ K F Q I++ + FSPD + I +W
Sbjct: 115 QSLVTASDDKTIKVWTVHRQKFLFSLNQHINW---VRCAKFSPDGRLIVSASDDKTIKLW 171
Query: 426 DRT 428
D+T
Sbjct: 172 DKT 174
Score = 35.4 bits (80), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 318 GHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNF 377
GH D ++P+ + A+G+ D +W+++ ++ + G+ AI S+ F+ G+
Sbjct: 16 GHRDTVTTVDFNPNTKQLASGSMDSCLMIWNMKPQMRAYRFV-GHKDAILSVDFSPSGHL 74
Query: 378 MAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVWDRT 428
+A A V ++ E G + ++FS D ++L D+T
Sbjct: 75 IASASRDKTVRLWVPSVKGESTVFKAHTGTVRSVSFSGDGQSLVTASDDKT 125
>sp|O74855|NLE1_SCHPO Ribosome assembly protein C18.05c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC18.05c PE=3 SV=1
Length = 502
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
VNH S SPDG+ + + L D +TGK + L GH+ + AW D R+ + +Q
Sbjct: 392 VNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQ 451
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVY 390
D T +VWDVR+ K L G+ + ++ ++ DG +A V ++
Sbjct: 452 DTTLKVWDVRS-KKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 286 LSPDGKLLVIVGDNPEGILVDSQ-TGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTC 344
L G+ LV D+ + IL D Q + K I + GH +++ PDGR AT + D +
Sbjct: 354 LKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSV 413
Query: 345 RVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDF 404
R+WD + K +A L+G++ A+ +++D + + + V+D ++ K+ + D
Sbjct: 414 RLWDGKT-GKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRS---KKMKFDL 469
Query: 405 FG---EISGMTFSPDTEALFIGVWDR 427
G ++ + +SPD + + G D+
Sbjct: 470 PGHEDQVFAVDWSPDGQRVASGGADK 495
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 304 LVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRN 351
L D T I + GH ++ AW PD I ATG+ D T R WD +
Sbjct: 161 LWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKK 208
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 87/223 (39%), Gaps = 30/223 (13%)
Query: 196 TLAVRDNLLIAGGFQGELICKYLDQPGVSFCSRTTYDENAITNAVEIYN----------- 244
T+ ++DNL + G + K D + + + + A+T N
Sbjct: 85 TIEIQDNLYTSVFHNG--LMKTEDHLTLLYTPQAVFRVRAVTRCTASMNGHDGTIISAQF 142
Query: 245 SPSGGIHFMASNNDCGVRDFDMER----FQLSKHFSFPWPVNHTSLSPDGKLLVIVGDNP 300
SPS + + D R +D + + H ++ V+ + +PD ++ +
Sbjct: 143 SPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNW---VSCVAWAPDASIIATGSMDN 199
Query: 301 EGILVDSQTGKAIM-PLCGHLDFSFASAWHP-------DGRIFATGNQDKTCRVWDVRNL 352
D + G I L H A W P + A+G++D T R+W+V+ L
Sbjct: 200 TIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVK-L 258
Query: 353 SKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG 395
+ L G+ I +R+ N++ + + ++DAK+G
Sbjct: 259 RTLLFTLSGHTAPITCVRWGGQ-NWIYSSSYDKTIRIWDAKDG 300
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 8/165 (4%)
Query: 235 AITNAVEIYNSPSGGIHFMASNNDCGVRDFDMER----FQLSKHFSFPWPVNHTSLSPDG 290
A T V + S G F+ +++D V+ + R F LS+H ++ V SPDG
Sbjct: 101 AHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINW---VRCAKFSPDG 157
Query: 291 KLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVR 350
+L+V D+ L D + + + C H F +HP G A D T +VWDVR
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Query: 351 NLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG 395
+ + + + A+ ++ F GN++ A + + D G
Sbjct: 218 T-HRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEG 261
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 14/123 (11%)
Query: 316 LCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDG 375
GH D + P G + A+G++DKT R+W V N+ V + + +RS+ F SDG
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 376 NFMAMAEPADFVHVYDA---KNGFEKEQEIDFFGEISGMTFSPDTEALF-------IGVW 425
A V V+ K F Q I++ + FSPD + + +W
Sbjct: 116 QSFVTASDDKTVKVWSTHRQKFLFSLSQHINW---VRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 426 DRT 428
D+T
Sbjct: 173 DKT 175
Score = 40.4 bits (93), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 246 PSGGIHFMASNNDCGVRDFDMERFQLSKHFSF-PWPVNHTSLSPDGKLLVIVGDNPEGIL 304
PSG A+ D V+ +D+ +L +H+ VN S P G LV + +
Sbjct: 197 PSGTC-IAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKI 255
Query: 305 VDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVW 347
+D G+ + L GH + A+ G FA+G D+ VW
Sbjct: 256 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>sp|O76734|TUP1_DICDI General transcriptional corepressor tupA OS=Dictyostelium
discoideum GN=tupA PE=2 SV=1
Length = 579
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
V ++SPDG+L+ + L D+QTG + GHLD ++ A+ PDG+ A+G+
Sbjct: 418 VTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSL 477
Query: 341 DKTCRVWDV---RNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG 395
DK+ ++WD+ R+ S+ A G+ + S+ F+ DG+++ V +D +NG
Sbjct: 478 DKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNG 535
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
+ SPDG L ++ + D T K GH ++ + DGR +G+
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLG---AIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFE 397
DK ++WD+ + + +G + S+ + DG +A + V ++DA+ G+
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYF 449
Query: 398 KEQEIDFFGEISGMTFSPDTEALFIGVWDRT 428
E+ + + FSPD ++L G D++
Sbjct: 450 LERYEGHLDSVYSVAFSPDGKSLASGSLDKS 480
>sp|O13282|TAF5_SCHPO Transcription initiation factor TFIID subunit 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf5 PE=1 SV=1
Length = 643
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 313 IMPL---CGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSI 369
I PL GHL +HP+ TG+ DKTCR+WDV SV V G+ + ++
Sbjct: 453 IYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHR-GHSVRVFNGHTQPVTAV 511
Query: 370 RFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVWDRT 428
DG+ MA A+ +H++D G + G I ++FS ++ L G D T
Sbjct: 512 AIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCT 570
Score = 36.6 bits (83), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 251 HFMASNNDCGVRDFDMERFQLSKHFS-FPWPVNHTSLSPDGKLLVIVGDNPEGI--LVDS 307
+ + ++D R +D+ R + F+ PV +++PDG + + EG+ L D
Sbjct: 477 YVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGH--TMASADSEGLIHLWDI 534
Query: 308 QTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDV 349
TG+ I + GH ++ ++ + + +G D T R WDV
Sbjct: 535 GTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDV 576
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 235 AITNAVEIYNSPSGGIHFMASNNDCGVRDFDMER----FQLSKHFSFPWPVNHTSLSPDG 290
A T V + G + +++D ++ + + R F L++H ++ V SPDG
Sbjct: 100 AHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINW---VRCAKFSPDG 156
Query: 291 KLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVR 350
+L+V D+ L D + + I C H F +HP G A D T +VWD+R
Sbjct: 157 RLIVSASDDKTIKLWDKTSRECIQSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIR 216
Query: 351 NLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG 395
++K + + + G + S+ F GN++ A + V D G
Sbjct: 217 -MNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEG 260
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 316 LCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDG 375
GH D + + P G + A+ ++DKT R+W V ++ K + G +RS+ F+ DG
Sbjct: 56 FVGHKDAILSVDFSPSGHLIASASRDKTVRLW-VPSVKGESTAFKAHTGTVRSVSFSGDG 114
Query: 376 NFMAMAEPADFVHVYDA---KNGFEKEQEIDFFGEISGMTFSPDTEALF-------IGVW 425
+ A + V+ K F Q I++ + FSPD + I +W
Sbjct: 115 QSLVTASDDKTIKVWTVHRQKFLFSLNQHINW---VRCAKFSPDGRLIVSASDDKTIKLW 171
Query: 426 DRTYGSLLQ 434
D+T +Q
Sbjct: 172 DKTSRECIQ 180
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 78/188 (41%), Gaps = 10/188 (5%)
Query: 226 CSRTTYDENAITNAVEIYNSPSGGIHFMASNNDCGVRDFDMERFQLSKHFSF-PWPVNHT 284
C ++ + N V+ + PSG A+ D V+ +D+ +L +H+ VN
Sbjct: 178 CIQSFCEHGGFVNFVDFH--PSGTC-IAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSL 234
Query: 285 SLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTC 344
S P G L+ ++ ++D G+ + L GH + +G FA+G D+
Sbjct: 235 SFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTCVKFSREGDFFASGGSDEQV 294
Query: 345 RVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDF 404
VW + S L L ++ F S G++ ++ +PAD V+ Q D
Sbjct: 295 MVWKTNFDAGSYPDL---LKYRQNDTFPSGGDYTSIVQPAD---VHQPARNAHVTQAADL 348
Query: 405 FGEISGMT 412
I+ M+
Sbjct: 349 EPHITEMS 356
Score = 35.4 bits (80), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 318 GHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNF 377
GH D A ++ + + A+G+ D VW+++ ++ + G+ AI S+ F+ G+
Sbjct: 16 GHRDTVTAVDFNANTKQLASGSMDSCLMVWNMKTQMRAYRFV-GHKDAILSVDFSPSGHL 74
Query: 378 MAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVWDRT 428
+A A V ++ E G + ++FS D ++L D+T
Sbjct: 75 IASASRDKTVRLWVPSVKGESTAFKAHTGTVRSVSFSGDGQSLVTASDDKT 125
>sp|Q5M786|WDR5_XENTR WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2
SV=1
Length = 334
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 10/172 (5%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
++ + S D LLV D+ + D +GK + L GH ++ F ++P + +G+
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D++ R+WDV+ K + L + + ++ F DG+ + + ++D +G +
Sbjct: 150 DESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 401 EIDFFG-EISGMTFSPDTEALF-------IGVWDRTYGSLLQYNRC-RNYTY 443
ID +S + FSP+ + + + +WD + G L+ C +N Y
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKY 260
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 316 LCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDG 375
L GH + + P+G A+ + DK ++W + K + G+ I + ++SD
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDS 99
Query: 376 NFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIG-------VWDRT 428
N + A + ++D +G + + F+P + + G +WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 429 YGSLLQ 434
G L+
Sbjct: 160 TGKCLK 165
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 237 TNAVEIYNSPSGGIHFMASNNDCGVRDFDMER----FQLSKHFSFPWPVNHTSLSPDGKL 292
+N + + G +DC V + + + L+ H S PV L+ +L
Sbjct: 21 SNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS---PVESVRLNTPEEL 77
Query: 293 LVIVGDNPEGILV-DSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRN 351
+V G I V D + K + L GH + +HP G A+G+QD ++WD+R
Sbjct: 78 IV-AGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 352 LSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGM 411
V +G+ A+R +RF+ DG ++A A V ++D G + G ++ +
Sbjct: 137 -KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 412 TFSPDTEALFIGVWDRT 428
F P+ L G DRT
Sbjct: 196 EFHPNEYLLASGSSDRT 212
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 42/266 (15%)
Query: 168 VLDVSGHVAPCEKHPGNLLEGFTQTQVSTLAVRDNLLIAGGFQGELICKYLDQPGVSFCS 227
++ ++GH +P E L + L++AG G + L+ +
Sbjct: 56 IMSLTGHTSPVES--------------VRLNTPEELIVAGSQSGSIRVWDLEAAKIL--- 98
Query: 228 RTTYDENAITNAVEIYNSPSGGIHFMAS-NNDCGVRDFDMER----FQLSKHFSFPWPVN 282
RT A +++ + P G F+AS + D ++ +D+ R F+ H V
Sbjct: 99 RTLMGHKANICSLDFH--PYG--EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA---VR 151
Query: 283 HTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDK 342
SPDGK L D+ L D GK + GH +HP+ + A+G+ D+
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 343 TCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEI 402
T R WD+ + V+ ++G G +RS+ F DG + + D + VY G+E E+
Sbjct: 212 TIRFWDLEKF-QVVSCIEGEPGPVRSVLFNPDGCCL-YSGCQDSLRVY----GWEPERCF 265
Query: 403 DF----FGEISGMTFSPDTEALFIGV 424
D +G+++ + D IGV
Sbjct: 266 DVVLVNWGKVADLAICNDQ---LIGV 288
>sp|P49846|TAF5_DROME Transcription initiation factor TFIID subunit 5 OS=Drosophila
melanogaster GN=Taf5 PE=1 SV=1
Length = 704
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 279 WPVNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATG 338
+PV +P G V + L + + +A+ GHL +HP+ ATG
Sbjct: 493 YPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATG 552
Query: 339 NQDKTCRVWDVRNLS-KSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFE 397
+ D+T R+WD N++ +SV ++ G+ G++ S+ F++ G ++A + ++D NG
Sbjct: 553 SSDRTVRLWD--NMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSL 610
Query: 398 KEQEIDFFGEISGMTFSPDTEAL 420
+ ++ +TFS D L
Sbjct: 611 VTTLLRHTSTVTTITFSRDGTVL 633
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 280 PVNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGN 339
PV + +P+ LL+ ++ L T ++ GH+ + + P G F + +
Sbjct: 452 PVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCS 511
Query: 340 QDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKE 399
DKT R+W + ++++ V G+L + ++F + N++A V ++D G
Sbjct: 512 YDKTARLW-ATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVR 570
Query: 400 QEIDFFGEISGMTFSPDTEALFIG-------VWDRTYGSLL 433
G +S + FS L G +WD + GSL+
Sbjct: 571 LMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLV 611
Score = 38.9 bits (89), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/125 (18%), Positives = 53/125 (42%), Gaps = 1/125 (0%)
Query: 304 LVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNL 363
++D ++G+ L GH + A+ P+ + + ++D T R+W + S V +G++
Sbjct: 434 MLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWS-CVVTYRGHV 492
Query: 364 GAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIG 423
+ +RF G + ++ + + ++ + F P++ + G
Sbjct: 493 YPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATG 552
Query: 424 VWDRT 428
DRT
Sbjct: 553 SSDRT 557
>sp|Q8N136|WDR69_HUMAN Outer row dynein assembly protein 16 homolog OS=Homo sapiens
GN=WDR69 PE=1 SV=1
Length = 415
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 294 VIVGDNPEGILV-DSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNL 352
+I G ++V D+ TG+ + L GH +++++ D + TG+ DKTC++WD N
Sbjct: 234 IITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATN- 292
Query: 353 SKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMT 412
K VA L G+ I F G +A A ++ A + GEIS ++
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKIS 352
Query: 413 FSPDTEALFIG-------VWDRTYGSLLQ 434
F+P L G +WD G LQ
Sbjct: 353 FNPQGNHLLTGSSDKTARIWDAQTGQCLQ 381
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 308 QTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIR 367
+TGK GH +++P + ATG+ D T ++WD++N + V L+G+ I
Sbjct: 165 ETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQN-GEEVYTLRGHSAEII 223
Query: 368 SIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVWDR 427
S+ F + G+ + V V+DA G + I EIS +F+ D + G D+
Sbjct: 224 SLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDK 283
Query: 428 T 428
T
Sbjct: 284 T 284
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
++ S +P G L+ + + D+QTG+ + L GH D F+ A++ G I TG++
Sbjct: 348 ISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSK 407
Query: 341 DKTCRVW 347
D TCR+W
Sbjct: 408 DNTCRIW 414
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 290 GKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDV 349
GKL+ + + + T K I L GH +++P G TG+ DKT R+WD
Sbjct: 315 GKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDA 374
Query: 350 RNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVY 390
+ + + VL+G+ I S F GN + + ++
Sbjct: 375 QT-GQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 39.7 bits (91), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 285 SLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTC 344
S +P L+ + L D Q G+ + L GH + +++ G TG+ D T
Sbjct: 184 SFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTV 243
Query: 345 RVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG 395
VWD + + V +L G+ I S F D + + ++DA NG
Sbjct: 244 VVWDA-DTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNG 293
Score = 35.4 bits (80), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 327 AWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSD-GNFMAMAEPAD 385
A + G F TG+ D+TC++WD + + + L+G+ + +I F + G+ +A
Sbjct: 99 ALNKSGSCFITGSYDRTCKLWDTAS-GEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDK 157
Query: 386 FVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVWDRT 428
++ + G EI ++F+P + + G D T
Sbjct: 158 TCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTT 200
>sp|Q5BK30|WDR69_RAT Outer row dynein assembly protein 16 homolog OS=Rattus norvegicus
GN=Wdr69 PE=2 SV=1
Length = 415
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 304 LVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNL 363
L ++TGK GH +++P + ATG+ D T ++WD+++ + V L G+L
Sbjct: 161 LWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQS-GEEVVTLTGHL 219
Query: 364 GAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIG 423
I S+ F + G+ + V V+DA G + I EIS FS D + G
Sbjct: 220 AEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTG 279
Query: 424 VWDRT 428
D+T
Sbjct: 280 SMDKT 284
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 294 VIVGDNPEGILV-DSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNL 352
+I G ++V D+ TG+ + L GH ++ + D + TG+ DKTC +WD +
Sbjct: 234 IITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATS- 292
Query: 353 SKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMT 412
K VA L G+ I F G +A A VY+A + GEIS ++
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKIS 352
Query: 413 FSPDTEALFIG-------VWDRTYGSLLQ 434
F+P L G +WD G LQ
Sbjct: 353 FNPQGNRLLTGSSDKTARIWDVQTGQCLQ 381
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 280 PVNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWH-PDGRIFATG 338
P+ + +L+ G + + + D+ +G+ + L GH + +A A++ P G ATG
Sbjct: 94 PLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATG 153
Query: 339 NQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEK 398
+ DKTC++W K +G+ I + F +A ++D ++G E
Sbjct: 154 SFDKTCKLWSAET-GKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEV 212
Query: 399 EQEIDFFGEISGMTFSPDTEALFIGVWDRT 428
EI ++F + + G +D T
Sbjct: 213 VTLTGHLAEIISLSFDTSGDRIITGSFDHT 242
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
++ S +P G L+ + + D QTG+ + L GH D F+ A++ G I TG++
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSK 407
Query: 341 DKTCRVW 347
D +CR+W
Sbjct: 408 DNSCRIW 414
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 290 GKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDV 349
GKL+ + + ++ T K I L GH +++P G TG+ DKT R+WDV
Sbjct: 315 GKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDV 374
Query: 350 RNLSKSVAVLKGNLGAIRSIRFTSDGNFM 378
+ + + VL+G+ I S F GN +
Sbjct: 375 QT-GQCLQVLEGHTDEIFSCAFNYKGNIV 402
Score = 39.7 bits (91), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Query: 285 SLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTC 344
S +P ++ + L D Q+G+ ++ L GHL + ++ G TG+ D T
Sbjct: 184 SFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTV 243
Query: 345 RVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG 395
VWD + V L G+ I S F+ D + + ++DA +G
Sbjct: 244 VVWDAST-GRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSG 293
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 237 TNAVEIYNSPSGGIHFMASNNDCGVRDFDMER----FQLSKHFSFPWPVNHTSLSPDGKL 292
+N + + G +DC V + + + L+ H S PV L+ +L
Sbjct: 21 SNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS---PVESVRLNTPEEL 77
Query: 293 LVIVGDNPEGILV-DSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRN 351
+V G I V D + K + L GH + +HP G A+G+QD ++WD+R
Sbjct: 78 IV-AGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 352 LSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGM 411
V +G+ A+R +RF+ DG ++A A V ++D G + G ++ +
Sbjct: 137 -KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 412 TFSPDTEALFIGVWDRT 428
F P+ L G DRT
Sbjct: 196 EFHPNEYLLASGSSDRT 212
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 42/266 (15%)
Query: 168 VLDVSGHVAPCEKHPGNLLEGFTQTQVSTLAVRDNLLIAGGFQGELICKYLDQPGVSFCS 227
++ ++GH +P E L + L++AG G + L+ +
Sbjct: 56 IMSLTGHTSPVES--------------VRLNTPEELIVAGSQSGSIRVWDLEAAKIL--- 98
Query: 228 RTTYDENAITNAVEIYNSPSGGIHFMAS-NNDCGVRDFDMER----FQLSKHFSFPWPVN 282
RT A +++ + P G F+AS + D ++ +D+ R F+ H V
Sbjct: 99 RTLMGHKANICSLDFH--PYG--EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA---VR 151
Query: 283 HTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDK 342
SPDGK L D+ L D GK + GH +HP+ + A+G+ D+
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 343 TCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEI 402
T R WD+ + V+ ++G G +RS+ F DG + + D + VY G+E E+
Sbjct: 212 TIRFWDLEKF-QVVSCIEGEPGPVRSVLFNPDGCCL-YSGCQDSLRVY----GWEPERCF 265
Query: 403 DF----FGEISGMTFSPDTEALFIGV 424
D +G+++ + D IGV
Sbjct: 266 DVVLVNWGKVADLAICNDQ---LIGV 288
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 8/165 (4%)
Query: 235 AITNAVEIYNSPSGGIHFMASNNDCGVRDFDMER----FQLSKHFSFPWPVNHTSLSPDG 290
A T V + S G F+ +++D V+ + R F LS+H ++ V SPDG
Sbjct: 101 AHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINW---VRCAKFSPDG 157
Query: 291 KLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVR 350
+L+V D+ L D + + + C H F +HP G A D T +VWDVR
Sbjct: 158 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Query: 351 NLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG 395
+ + + + A+ + F GN++ A + + D G
Sbjct: 218 T-HRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEG 261
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 318 GHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNF 377
GH D + P G + A+G++DKT R+W V N+ V + + +RS+ F SDG
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQS 117
Query: 378 MAMAEPADFVHVYDA---KNGFEKEQEIDFFGEISGMTFSPDTEALF-------IGVWDR 427
A V V+ K F Q I++ + FSPD + + +WD+
Sbjct: 118 FVTASDDKTVKVWATHRQKFLFSLSQHINW---VRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 428 T 428
+
Sbjct: 175 S 175
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 12/137 (8%)
Query: 246 PSGGIHFMASNNDCGVRDFDMERFQLSKHFSF-PWPVNHTSLSPDGKLLVIVGDNPEGIL 304
PSG A+ D V+ +D+ +L +H+ VN S P G L+ + +
Sbjct: 197 PSGTC-IAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 255
Query: 305 VDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVW----------DVRNLSK 354
+D G+ + L GH + A+ G FA+G D+ VW +V + +
Sbjct: 256 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDHGEVTKVPR 315
Query: 355 SVAVLKGNLGAIRSIRF 371
A L ++G + + F
Sbjct: 316 PPATLASSMGNLPEVDF 332
>sp|Q9USN3|UTP13_SCHPO Probable U3 small nucleolar RNA-associated protein 13
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=utp13 PE=3 SV=3
Length = 777
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
VN +S DG+++ + L DS TG+ + L GH +A +++P R A+G+
Sbjct: 468 VNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSG 527
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG 395
D+T R+W+V + + V L+G+ GAI + + S G + A V V+ +G
Sbjct: 528 DRTIRIWNV-DTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSG 581
Score = 35.4 bits (80), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 13/155 (8%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
V +++ D K L+ + + + +G+ I + H P + ATG
Sbjct: 64 VTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGA 123
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPAD--FVHVYDAKNG--- 395
+ +VWD+ + +G+ G I ++ F N +A AD V ++D +
Sbjct: 124 EGLVKVWDIAG-AYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSM 182
Query: 396 --FEKEQEIDFFGEISGMTFSPDTEALFIGVWDRT 428
FE + I G+TF P L G D+T
Sbjct: 183 AVFEGHSSV-----IRGLTFEPTGSFLLSGSRDKT 212
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 296 VGDNPEGILVDSQTGKAIM-PLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVR---N 351
V N E I V S G + L GH D DG ATG +D T R+W++ N
Sbjct: 339 VCSNTEFIDVISTDGTQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDN 398
Query: 352 LSKSVAVLKGNLGAIRSIRF 371
+ K + V G+ ++ ++
Sbjct: 399 VYKCIHVFTGHTASVTAVAL 418
>sp|Q7PS24|CIAO1_ANOGA Probable cytosolic iron-sulfur protein assembly protein Ciao1
OS=Anopheles gambiae GN=Ciao1 PE=3 SV=3
Length = 341
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 313 IMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVA---VLKGNLGAIRSI 369
+ L GH +++AWHP G++FA+ +DKT RVW+ + + VA + G+ IR +
Sbjct: 7 LQTLTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIREL 66
Query: 370 RFTSDGNFMAMAEPADFVHVYDAKNG-FEKEQEIDFF-GEISGMTFS 414
++ G+++A A V V+D K+G FE ++ E+ +T+S
Sbjct: 67 AWSCCGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWS 113
>sp|Q498M4|WDR5_RAT WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2
SV=1
Length = 334
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 10/172 (5%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
++ + S D LLV D+ + D +GK + L GH ++ F ++P + +G+
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D++ R+WDV+ K + L + + ++ F DG+ + + ++D +G +
Sbjct: 150 DESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 401 EIDFFG-EISGMTFSPDTEALF-------IGVWDRTYGSLLQ-YNRCRNYTY 443
ID +S + FSP+ + + + +WD + G L+ Y +N Y
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 260
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 316 LCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDG 375
L GH + + P+G A+ + DK ++W + K + G+ I + ++SD
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDS 99
Query: 376 NFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIG-------VWDRT 428
N + A + ++D +G + + F+P + + G +WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 429 YGSLLQ 434
G L+
Sbjct: 160 TGKCLK 165
>sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1
Length = 334
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 10/172 (5%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
++ + S D LLV D+ + D +GK + L GH ++ F ++P + +G+
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D++ R+WDV+ K + L + + ++ F DG+ + + ++D +G +
Sbjct: 150 DESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 401 EIDFFG-EISGMTFSPDTEALF-------IGVWDRTYGSLLQ-YNRCRNYTY 443
ID +S + FSP+ + + + +WD + G L+ Y +N Y
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 260
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 316 LCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDG 375
L GH + + P+G A+ + DK ++W + K + G+ I + ++SD
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDS 99
Query: 376 NFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIG-------VWDRT 428
N + A + ++D +G + + F+P + + G +WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 429 YGSLLQ 434
G L+
Sbjct: 160 TGKCLK 165
>sp|P61964|WDR5_HUMAN WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1
Length = 334
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 10/172 (5%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
++ + S D LLV D+ + D +GK + L GH ++ F ++P + +G+
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D++ R+WDV+ K + L + + ++ F DG+ + + ++D +G +
Sbjct: 150 DESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 401 EIDFFG-EISGMTFSPDTEALF-------IGVWDRTYGSLLQ-YNRCRNYTY 443
ID +S + FSP+ + + + +WD + G L+ Y +N Y
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 260
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 316 LCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDG 375
L GH + + P+G A+ + DK ++W + K + G+ I + ++SD
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDS 99
Query: 376 NFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIG-------VWDRT 428
N + A + ++D +G + + F+P + + G +WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 429 YGSLLQ 434
G L+
Sbjct: 160 TGKCLK 165
>sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1
Length = 334
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 10/172 (5%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
++ + S D LLV D+ + D +GK + L GH ++ F ++P + +G+
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D++ R+WDV+ K + L + + ++ F DG+ + + ++D +G +
Sbjct: 150 DESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 401 EIDFFG-EISGMTFSPDTEALF-------IGVWDRTYGSLLQ-YNRCRNYTY 443
ID +S + FSP+ + + + +WD + G L+ Y +N Y
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 260
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 316 LCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDG 375
L GH + + P+G A+ + DK ++W + K + G+ I + ++SD
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDS 99
Query: 376 NFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIG-------VWDRT 428
N + A + ++D +G + + F+P + + G +WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 429 YGSLLQ 434
G L+
Sbjct: 160 TGKCLK 165
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 7/167 (4%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
++ + S D KL+ D+ + D ++GK + L GH ++ F +++P + +G+
Sbjct: 91 ISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSF 150
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG-FEKE 399
D+ R+WDV N + ++ + + + F DG + V ++D G
Sbjct: 151 DENVRIWDV-NTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNT 209
Query: 400 QEIDFFGEISGMTFSPDTEALFIGVWDRTYGSLLQYN---RC-RNYT 442
+ E+S + FSP+ + + G D T L YN +C + YT
Sbjct: 210 ISTEDGKEVSFVKFSPNGKFVLAGTLDNTL-RLWSYNNNKKCLKTYT 255
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 11/174 (6%)
Query: 268 RFQLSKHFSFPWPVNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASA 327
++ L H ++ SPDGK L + + + GK L GH + A
Sbjct: 39 KYTLKGHLK---SISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIA 95
Query: 328 WHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFV 387
W D ++ + + DKT ++WDV + K V LKG+ + + F N + + V
Sbjct: 96 WSQDSKLICSASDDKTIKIWDVES-GKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENV 154
Query: 388 HVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIG-------VWDRTYGSLLQ 434
++D G + ++G+ F+ D + G +WD T G LL
Sbjct: 155 RIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLN 208
Score = 32.3 bits (72), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 290 GKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATG--NQDKTCRVW 347
GK +V ++ + + QT + + L GH D A HP I A+G +D++ ++W
Sbjct: 273 GKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 304 LVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNL 363
L D + K + L GH + +HP G FA+G+ D ++WD+R + KG+
Sbjct: 85 LWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK-KGCIHTYKGHT 143
Query: 364 GAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIG 423
+ +RFT DG ++ + V V+D G + G+I + F P L G
Sbjct: 144 RGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATG 203
Query: 424 VWDRT 428
DRT
Sbjct: 204 SADRT 208
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
VN +PDG+ +V G++ + D GK + H + +HP + ATG+
Sbjct: 146 VNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSA 205
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLG----AIRSIRFTSDG 375
D+T + WD+ L G+ G +R + F DG
Sbjct: 206 DRTVKFWDLETFE-----LIGSGGPETAGVRCLSFNPDG 239
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
++ + S D +LLV D+ + + TGK++ L GH ++ F ++P + +G+
Sbjct: 117 ISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSF 176
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D++ R+WDVR K + L + + ++ F DG+ + + ++D +G +
Sbjct: 177 DESVRIWDVRT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 235
Query: 401 EI-DFFGEISGMTFSPDTEALF-------IGVWDRTYGSLLQ-YNRCRNYTY 443
I D +S + FSP+ + + + +WD + G L+ Y +N Y
Sbjct: 236 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 287
>sp|Q0P593|WDR69_BOVIN Outer row dynein assembly protein 16 homolog OS=Bos taurus GN=WDR69
PE=2 SV=1
Length = 415
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 294 VIVGDNPEGILV-DSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNL 352
+I G + V ++ TG+ + L GH ++ ++ D + TG+ DKTC++WD N
Sbjct: 234 IITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVN- 292
Query: 353 SKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMT 412
K VA L G+ I F G +A A ++ A + GEIS ++
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKIS 352
Query: 413 FSPDTEALFIG-------VWDRTYGSLLQ 434
F+P L G +WD G LQ
Sbjct: 353 FNPQGNRLLTGSSDKTARIWDAQTGQCLQ 381
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 308 QTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIR 367
+TGK GH +++P + ATG+ D T ++WD+++ + V L G+ I
Sbjct: 165 ETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQS-GEEVFTLTGHSAEII 223
Query: 368 SIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVWDR 427
S+ F + GN + V V++A G + I EIS F+ D + G D+
Sbjct: 224 SLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDK 283
Query: 428 T 428
T
Sbjct: 284 T 284
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
++ S +P G L+ + + D+QTG+ + L GH D F+ A++ G I TG++
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSK 407
Query: 341 DKTCRVW 347
D TCR+W
Sbjct: 408 DNTCRIW 414
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 290 GKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDV 349
GKL+ + + + T + + L GH +++P G TG+ DKT R+WD
Sbjct: 315 GKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDA 374
Query: 350 RNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVY 390
+ + + VL+G+ I S F G+ + + ++
Sbjct: 375 QT-GQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 39.3 bits (90), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 285 SLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTC 344
S +P L+ + L D Q+G+ + L GH + +++ G TG+ D T
Sbjct: 184 SFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTV 243
Query: 345 RVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG 395
VW+ + + V L G+ I S F D + + ++DA NG
Sbjct: 244 TVWEA-DTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNG 293
Score = 35.4 bits (80), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 327 AWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSD-GNFMAMAEPAD 385
A + G F TG+ D+TC++WD + + + L+G+ + +I F + G+ +A
Sbjct: 99 ALNKSGSCFITGSYDRTCKLWDTAS-GEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDK 157
Query: 386 FVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVWDRT 428
++ + G EI ++F+P + + G D T
Sbjct: 158 TCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTT 200
>sp|Q3MHE2|PRP4_BOVIN U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus GN=PRPF4
PE=2 SV=1
Length = 521
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 289 DGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWD 348
DG L G + G + D +TG+ IM L GHL + + P+G ATG+ D TC+VWD
Sbjct: 375 DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWD 434
Query: 349 VRNLSKSVAVLKGNLGAIRSIRFTS-DGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGE 407
+R + V + + + ++F GNF+ + ++ + G+
Sbjct: 435 LRQ-RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK 493
Query: 408 ISGMTFSPDTEALFIGVWDRTY 429
+ G+ S D + + +DRT+
Sbjct: 494 VMGLDISSDGQLIATCSYDRTF 515
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 2/149 (1%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
V + P G+ L + L D + + I+ GH + A+H DG + TG
Sbjct: 325 VARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGL 384
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D RVWD+R + + L+G+L I I F+ +G +A + V+D +
Sbjct: 385 DAFGRVWDLRT-GRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYT 443
Query: 401 EIDFFGEISGMTFSP-DTEALFIGVWDRT 428
++G+ F P L G +D T
Sbjct: 444 IPAHQNLVTGVKFEPIHGNFLLTGAYDNT 472
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 62/161 (38%), Gaps = 16/161 (9%)
Query: 281 VNHTSLSPDG--KLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATG 338
VN S + DG KL + D P + + GH WHP GR T
Sbjct: 293 VNLASCAADGSVKLWSLDSDEP------------VADIEGHTVRVARVTWHPSGRFLGTT 340
Query: 339 NQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEK 398
D++ R+WD+ + + +G+ + I F DG+ F V+D + G
Sbjct: 341 CYDRSWRLWDL-EAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI 399
Query: 399 EQEIDFFGEISGMTFSPDTEALFIGVWDRTYGSL-LQYNRC 438
EI G+ FSP+ + G D T L+ RC
Sbjct: 400 MFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRC 440
>sp|Q5NVD0|PRP4_PONAB U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii GN=PRPF4
PE=2 SV=1
Length = 521
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 289 DGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWD 348
DG L G + G + D +TG+ IM L GHL + + P+G ATG+ D TC+VWD
Sbjct: 375 DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWD 434
Query: 349 VRNLSKSVAVLKGNLGAIRSIRFTS-DGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGE 407
+R + V + + + ++F GNF+ + ++ + G+
Sbjct: 435 LRQ-RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK 493
Query: 408 ISGMTFSPDTEALFIGVWDRTY 429
+ G+ S D + + +DRT+
Sbjct: 494 VMGLDISSDGQLIATCSYDRTF 515
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 2/142 (1%)
Query: 288 PDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVW 347
P G+ L + L D + + I+ GH + A+H DG + TG D RVW
Sbjct: 332 PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW 391
Query: 348 DVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGE 407
D+R + + L+G+L I I F+ +G +A + V+D +
Sbjct: 392 DLRT-GRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNL 450
Query: 408 ISGMTFSP-DTEALFIGVWDRT 428
++G+ F P L G +D T
Sbjct: 451 VTGVKFEPIHGNFLLTGAYDNT 472
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 62/161 (38%), Gaps = 16/161 (9%)
Query: 281 VNHTSLSPDG--KLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATG 338
VN S + DG KL + D P + + GH WHP GR T
Sbjct: 293 VNLASCAADGSVKLWSLDSDEP------------VADIEGHTVRVARVMWHPSGRFLGTT 340
Query: 339 NQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEK 398
D++ R+WD+ + + +G+ + I F DG+ F V+D + G
Sbjct: 341 CYDRSWRLWDL-EAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI 399
Query: 399 EQEIDFFGEISGMTFSPDTEALFIGVWDRTYGSL-LQYNRC 438
EI G+ FSP+ + G D T L+ RC
Sbjct: 400 MFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRC 440
>sp|O43172|PRP4_HUMAN U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens GN=PRPF4
PE=1 SV=2
Length = 522
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 289 DGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWD 348
DG L G + G + D +TG+ IM L GHL + + P+G ATG+ D TC+VWD
Sbjct: 376 DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWD 435
Query: 349 VRNLSKSVAVLKGNLGAIRSIRFTS-DGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGE 407
+R + V + + + ++F GNF+ + ++ + G+
Sbjct: 436 LRQ-RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK 494
Query: 408 ISGMTFSPDTEALFIGVWDRTY 429
+ G+ S D + + +DRT+
Sbjct: 495 VMGLDISSDGQLIATCSYDRTF 516
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 63/164 (38%), Gaps = 16/164 (9%)
Query: 278 PWPVNHTSLSPDG--KLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIF 335
P VN S + DG KL + D P + + GH WHP GR
Sbjct: 291 PKDVNLASCAADGSVKLWSLDSDEP------------VADIEGHTVRVARVMWHPSGRFL 338
Query: 336 ATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG 395
T D++ R+WD+ + + +G+ + I F DG+ F V+D + G
Sbjct: 339 GTTCYDRSWRLWDL-EAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTG 397
Query: 396 FEKEQEIDFFGEISGMTFSPDTEALFIGVWDRTYGSL-LQYNRC 438
EI G+ FSP+ + G D T L+ RC
Sbjct: 398 RCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRC 441
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 2/142 (1%)
Query: 288 PDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVW 347
P G+ L + L D + + I+ GH + A+H DG + TG D RVW
Sbjct: 333 PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW 392
Query: 348 DVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGE 407
D+R + + L+G+L I I F+ +G +A + V+D +
Sbjct: 393 DLRT-GRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNL 451
Query: 408 ISGMTFSP-DTEALFIGVWDRT 428
++G+ F P L G +D T
Sbjct: 452 VTGVKFEPIHGNFLLTGAYDNT 473
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 8/165 (4%)
Query: 235 AITNAVEIYNSPSGGIHFMASNNDCGVRDFDMER----FQLSKHFSFPWPVNHTSLSPDG 290
A T V + S G + +++D V+ + R F L++H ++ V SPDG
Sbjct: 101 AHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINW---VRCAKFSPDG 157
Query: 291 KLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVR 350
+L+V D+ L D + + I C H F +HP G A D T +VWD R
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDAR 217
Query: 351 NLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG 395
+ + + + A+ ++ F GN++ A + + D G
Sbjct: 218 T-HRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEG 261
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 318 GHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNF 377
GH D + P G + A+G++DKT R+W V N+ V + + +RS+ F SDG
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQS 117
Query: 378 MAMAEPADFVHVYDAKNG---FEKEQEIDFFGEISGMTFSPDTEALF-------IGVWDR 427
+ A V V+ F Q I++ + FSPD + + +WD+
Sbjct: 118 LVTASDDKTVKVWSTHRQRFLFSLTQHINW---VRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 428 T 428
T
Sbjct: 175 T 175
Score = 38.9 bits (89), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 246 PSGGIHFMASNNDCGVRDFDMERFQLSKHFSF-PWPVNHTSLSPDGKLLVIVGDNPEGIL 304
PSG A+ D V+ +D +L +H+ VN S P G L+ + +
Sbjct: 197 PSGTC-IAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKI 255
Query: 305 VDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVW 347
+D G+ + L GH + A+ G FA+G D+ VW
Sbjct: 256 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Query: 293 LVIVGDNPEGILV-DSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRN 351
L++ G + + D + K + L GH + +HP G A+G+ D ++WDVR
Sbjct: 77 LIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRR 136
Query: 352 LSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGM 411
V KG+ A+R +RF+ DG ++A A V ++D G + + G ++ +
Sbjct: 137 -KGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNII 195
Query: 412 TFSPDTEALFIGVWDRT 428
F P+ L G DRT
Sbjct: 196 EFHPNEYLLASGSADRT 212
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 131/318 (41%), Gaps = 56/318 (17%)
Query: 109 PTKKGGKYYEFWRNTRSVKSTILHFQLRNLVWSTSKHDVYLMSHFSIVHWSSLSSKRTEV 168
PTK K E + SV S +L LV +T D + H WS +K +
Sbjct: 6 PTKTTWKLQEIVAHGCSVSSVVLGRSSGRLV-ATGGDDCRV--HL----WSV--NKPNCI 56
Query: 169 LDVSGHVAPCEKHPGNLLEGFTQTQVSTLAVRDN----LLIAGGFQGELICKYLDQPGVS 224
+ ++GH P E +VR N L++AG G L L+ +
Sbjct: 57 MSLTGHTTPVE------------------SVRFNNSEELIVAGSQSGSLRIWDLEAAKIL 98
Query: 225 FCSRTTYDENAITNAVEIYNSPSGGIHFMASNN-DCGVRDFDMER----FQLSKHFSFPW 279
RT A ++++ + P G F+AS + D ++ +D+ R F+ H
Sbjct: 99 ---RTLMGHKANVSSLDFH--PYG--EFVASGSLDTNIKLWDVRRKGCVFRYKGHTQA-- 149
Query: 280 PVNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGN 339
V SPDGK L D+ L D GK + L H +HP+ + A+G+
Sbjct: 150 -VRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGS 208
Query: 340 QDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKE 399
D+T R WD+ + V +G +R+I F++DG + D + VY G+E +
Sbjct: 209 ADRTVRFWDLEKF-QLVGCTEGETIPVRAILFSNDGGCIFCGG-KDSLRVY----GWEPD 262
Query: 400 QEIDF----FGEISGMTF 413
Q D +G++S +
Sbjct: 263 QCFDTVPVGWGKVSDLAI 280
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Query: 293 LVIVGDNPEGILV-DSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRN 351
L++ G + V D + K + L GH + +HP G A+G+ D ++WDVR
Sbjct: 77 LIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRR 136
Query: 352 LSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGM 411
V KG+ A+R +RF+ DG ++A A V ++D G + + G ++ +
Sbjct: 137 -KGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNII 195
Query: 412 TFSPDTEALFIGVWDRT 428
F P+ L G DRT
Sbjct: 196 EFHPNEYLLASGSADRT 212
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 119/300 (39%), Gaps = 44/300 (14%)
Query: 109 PTKKGGKYYEFWRNTRSVKSTILHFQLRNLVWSTSKHDVYLMSHFSIVHWSSLSSKRTEV 168
PTK K E + SV S +L LV +T D + WS +K +
Sbjct: 6 PTKTTWKLQEIVAHGSSVSSVVLGKSSGRLV-ATGGDDCR------VNLWSV--NKPNCI 56
Query: 169 LDVSGHVAPCEKHPGNLLEGFTQTQVSTLAVRDNLLIAGGFQGELICKYLDQPGVSFCSR 228
+ ++GH P E N E L++AG G L L+ + R
Sbjct: 57 MSLTGHTTPVESVRFNNAE--------------ELIVAGSQSGSLRVWDLEAAKIL---R 99
Query: 229 TTYDENAITNAVEIYNSPSGGIHFMASNN-DCGVRDFDMER----FQLSKHFSFPWPVNH 283
T A N + P G F+AS + D ++ +D+ R F+ H V
Sbjct: 100 TLMGHKA--NVCSLDFHPYG--DFVASGSLDTNIKLWDVRRKGCVFRYKGHTQA---VRC 152
Query: 284 TSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKT 343
SPDGK L D+ L D GK + L H +HP+ + A+G+ D+T
Sbjct: 153 LRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRT 212
Query: 344 CRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEID 403
R WD+ + + +G +R+I F+SDG + D + VY G+E +Q D
Sbjct: 213 VRFWDLEKF-QLIGCTEGETIPVRAILFSSDGGCIFCGG-RDALRVY----GWEPDQCFD 266
>sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans
GN=T10F2.4 PE=3 SV=2
Length = 492
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 280 PVNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLC---GHLDFSFASAWHPDGRIFA 336
PV SL+ G ++ D+ D ++GK++ + G + +HPDG IF
Sbjct: 295 PVTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFG 354
Query: 337 TGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKN 394
TG D ++WD++N + + A G+ A+RSI F+ +G ++A V ++D +
Sbjct: 355 TGAADAVVKIWDLKNQTVA-AAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLWDLRK 411
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 4/124 (3%)
Query: 305 VDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLG 364
+ +QT A P GH + A+ +G ATG++D ++WD+R L
Sbjct: 367 LKNQTVAAAFP--GHTAAVRSIAFSENGYYLATGSEDGEVKLWDLRKLKNLKTFANEEKQ 424
Query: 365 AIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGV 424
I S+ F G F+ + V V K+ E D G ++G+ F + +L
Sbjct: 425 PINSLSFDMTGTFLGIG--GQKVQVLHVKSWSEVVSLSDHSGPVTGVRFGENARSLVTCS 482
Query: 425 WDRT 428
D++
Sbjct: 483 LDKS 486
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
Query: 269 FQLSKHFSFPWPVNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAW 328
LS H S PV+ + +L+V + + D + K + L GH + +
Sbjct: 53 ISLSGHTS---PVDSVKFNSSEELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDF 109
Query: 329 HPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVH 388
HP G A+G+ D ++WDVR + KG+ + I+F+ DG ++ A +
Sbjct: 110 HPFGEFVASGSTDTNVKLWDVRR-KGCIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIK 168
Query: 389 VYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVWDRT 428
++D G ++ + G ++G+ F P+ L G DRT
Sbjct: 169 LWDLTMGKLFQEFKNHTGGVTGIEFHPNEFLLASGSSDRT 208
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
VN SPDGK LV ++ L D GK H +HP+ + A+G+
Sbjct: 146 VNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHPNEFLLASGSS 205
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D+T + WD+ + V+ A+RSI F DG+++ D +H + G+E +
Sbjct: 206 DRTVQFWDLETF-QLVSSTSPGASAVRSISFHPDGSYL-FCSSQDMLHAF----GWEPIR 259
Query: 401 EIDFF 405
D F
Sbjct: 260 CFDTF 264
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 9/162 (5%)
Query: 281 VNHTSLSP-DGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGN 339
VN +L P G+++V G++ + L I+ L GH + ++ + G+
Sbjct: 19 VNCLALGPMSGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKFNSSEELVVAGS 78
Query: 340 QDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKE 399
Q T +++D+ +K V L G+ +IR + F G F+A V ++D +
Sbjct: 79 QSGTMKIYDLEP-AKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGCIY 137
Query: 400 QEIDFFGEISGMTFSPD-------TEALFIGVWDRTYGSLLQ 434
+++ + FSPD +E I +WD T G L Q
Sbjct: 138 TYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQ 179
>sp|Q4V8C4|WDR5B_RAT WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2
SV=1
Length = 328
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
++ + S D LV D+ L D ++GK + L GH DF F ++P + +G+
Sbjct: 84 ISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSF 143
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D++ ++W+V+ K + L + I ++ F +G+ + ++DA +G
Sbjct: 144 DESVKIWEVKT-GKCLKTLSAHSDPISAVHFHCNGSLIVSGSYDGLCRIWDAASGQCLRT 202
Query: 401 EIDFFG-EISGMTFSPDTEALFIGVWDRTYGSLLQYNRCR 439
D +S + FSP+ + + D T L Y+R R
Sbjct: 203 LADEGNPPVSFVKFSPNGKYILTATLDSTL-KLWDYSRGR 241
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 23/158 (14%)
Query: 202 NLLIAGGFQGELICKYLDQPGVSFCSRTTYDE-NAITNAVEIYNSPSGGIHFMASNNDCG 260
+L+++G + G +C+ D C RT DE N + V+ SP+G + + + D
Sbjct: 178 SLIVSGSYDG--LCRIWDAAS-GQCLRTLADEGNPPVSFVKF--SPNGK-YILTATLDST 231
Query: 261 VRDFDMERFQLSKHFSFPWPVNH--------TSLSPDGKLLVIVGDNPEGILV-DSQTGK 311
++ +D R + K ++ H S S G+ V+ G + + + QT +
Sbjct: 232 LKLWDYSRGRCLKTYT-----GHKNEKYCIFASFSVTGRKWVVSGSEDNMVYIWNLQTKE 286
Query: 312 AIMPLCGHLDFSFASAWHPDGRIFATG--NQDKTCRVW 347
+ L GH D ++A HP I A+ DKT ++W
Sbjct: 287 IVQRLQGHTDVVISAACHPTENIIASAALENDKTIKIW 324
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
+N S S + + + D+ + D +G + + GH ++ F +++P + A+
Sbjct: 258 INDFSWSSNSQFIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGF 317
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D+T RVWD + V + + I SI + DGN MA + + V+DA +G +
Sbjct: 318 DETVRVWDFKT-GLCVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKT 376
Query: 401 EIDF-FGEISGMTFSPDTEALF-------IGVWDRTYGSLLQ-YNRCRNYTY 443
+D ++ + FSP+ + L + +WD L+ YN +N Y
Sbjct: 377 LVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKPLKYYNGHKNKKY 428
>sp|Q4R8E7|WDR69_MACFA Outer row dynein assembly protein 16 homolog OS=Macaca fascicularis
GN=WDR69 PE=2 SV=1
Length = 415
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Query: 294 VIVGDNPEGILV-DSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNL 352
+I G ++V D+ TG + L GH ++ ++ D + TG+ DKTC +WD N
Sbjct: 234 IITGSFDHTVVVWDADTGGKVNILIGHCAEISSALFNWDCSLILTGSMDKTCMLWDATN- 292
Query: 353 SKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMT 412
K VA L G+ I F G +A A ++ A + GEIS ++
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKIS 352
Query: 413 FSPDTEALFIG-------VWDRTYGSLLQ 434
F+P L G +WD G LQ
Sbjct: 353 FNPQGNRLLTGSSDKTARIWDAQTGQCLQ 381
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 308 QTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIR 367
+TGK GH +++P + ATG+ D T ++W+++N + V L+G+ I
Sbjct: 165 ETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWNIQN-GEEVCTLRGHSAEII 223
Query: 368 SIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVWDR 427
S+ F + G+ + V V+DA G + I EIS F+ D + G D+
Sbjct: 224 SLSFNTSGDRIITGSFDHTVVVWDADTGGKVNILIGHCAEISSALFNWDCSLILTGSMDK 283
Query: 428 T 428
T
Sbjct: 284 T 284
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
++ S +P G L+ + + D+QTG+ + L GH D F+ ++ G I TG++
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCTFNYKGNIVITGSK 407
Query: 341 DKTCRVW 347
D TCR+W
Sbjct: 408 DNTCRIW 414
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 290 GKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDV 349
GKL+ + + + T K I L GH +++P G TG+ DKT R+WD
Sbjct: 315 GKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDA 374
Query: 350 RNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVY 390
+ + + VL+G+ I S F GN + + ++
Sbjct: 375 QT-GQCLQVLEGHTDEIFSCTFNYKGNIVITGSKDNTCRIW 414
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
Query: 285 SLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTC 344
S +P L+ + L + Q G+ + L GH + +++ G TG+ D T
Sbjct: 184 SFNPQSTLVATGSMDTTAKLWNIQNGEEVCTLRGHSAEIISLSFNTSGDRIITGSFDHTV 243
Query: 345 RVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNG 395
VWD K V +L G+ I S F D + + ++DA NG
Sbjct: 244 VVWDADTGGK-VNILIGHCAEISSALFNWDCSLILTGSMDKTCMLWDATNG 293
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 327 AWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSD-GNFMAMAEPAD 385
A + G F TG+ D+TC++WD + + + L+G+ + +I F + G+ A
Sbjct: 99 ALNKSGSCFITGSYDRTCKLWDTAS-GEELNTLEGHRNVVYAIAFNNPYGDKTATGSFDK 157
Query: 386 FVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVWDRT 428
++ + G EI ++F+P + + G D T
Sbjct: 158 TCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTT 200
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 318 GHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNF 377
GHL +HP+ ATG+ DKT R+W + SV + G+ G + S+ F+ +G +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-GNSVRLFTGHRGPVLSLAFSPNGKY 482
Query: 378 MAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALF-------IGVWD 426
+A A + ++D +G ++ I+ +TFSPD+ + + VWD
Sbjct: 483 LASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWD 538
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 280 PVNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGN 339
PV + SP+GK L G++ L D +G L GH D + + PD + A+ +
Sbjct: 470 PVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASAS 529
Query: 340 QDKTCRVWDVRNL----------SKSVAVLKGNLGAIRSIRFTS 373
D + RVWD+RN S+ V V G + + S++F +
Sbjct: 530 MDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQFMA 573
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Query: 249 GIHFMASNNDCGVRDFDMER-FQLSKHFSFPWPVNHTSLSPDGKLLVIVGDNPEGILVDS 307
++F + ++D R + +R + L + V+ P+ L + L +
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 308 QTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQDKTCRVWDVRN--LSKSVAVLKGNLGA 365
Q G ++ GH + A+ P+G+ A+ +D+ ++WD+ + L K L+G+
Sbjct: 456 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKE---LRGHTDN 512
Query: 366 IRSIRFTSDGNFMAMAEPADFVHVYDAKNGF 396
I S+ F+ D +A A + V V+D +N +
Sbjct: 513 ITSLTFSPDSGLIASASMDNSVRVWDIRNTY 543
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 10/120 (8%)
Query: 330 PDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHV 389
P FA+G+ D+T R+W + + + + G+L + ++F + N++A V +
Sbjct: 394 PYSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 390 YDAKNGFEKEQEIDFFGEISGMTFSPDTEALF-------IGVWDRTYGSLLQYNRCRNYT 442
+ A+ G G + + FSP+ + L + +WD G+L Y R +T
Sbjct: 453 WSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL--YKELRGHT 510
>sp|Q9D7H2|WDR5B_MOUSE WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1
Length = 328
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
++ + S D LV D+ + D ++GK + L GH DF F ++P + +G+
Sbjct: 84 ISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSF 143
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D++ ++W+V+ K + L + I ++ F +G+ + ++DA +G
Sbjct: 144 DESVKIWEVKT-GKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRT 202
Query: 401 EIDFFG-EISGMTFSPDTEALFIGVWDRTYGSLLQYNRCR 439
D +S + FSP+ + + D T L Y+R R
Sbjct: 203 LADEGNPPVSFVKFSPNGKYILTATLDNTL-KLWDYSRGR 241
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 23/158 (14%)
Query: 202 NLLIAGGFQGELICKYLDQPGVSFCSRTTYDE-NAITNAVEIYNSPSGGIHFMASNNDCG 260
+L+++G + G +C+ D C RT DE N + V+ SP+G + + + D
Sbjct: 178 SLIVSGSYDG--LCRIWDAAS-GQCLRTLADEGNPPVSFVKF--SPNGK-YILTATLDNT 231
Query: 261 VRDFDMERFQLSKHFSFPWPVNH--------TSLSPDGKLLVIVGDNPEGILV-DSQTGK 311
++ +D R + K ++ H S S G+ V+ G + + + QT +
Sbjct: 232 LKLWDYSRGRCLKTYT-----GHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKE 286
Query: 312 AIMPLCGHLDFSFASAWHPDGRIFATG--NQDKTCRVW 347
+ L GH D ++A HP I A+ DKT +VW
Sbjct: 287 IVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 35.4 bits (80), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 359 LKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTE 418
L G+ AI S++F+ +G ++A + + ++ A +G K+ EIS + +S D+
Sbjct: 35 LAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSS 94
Query: 419 ALF-------IGVWDRTYGSLLQ 434
L + VWD G L+
Sbjct: 95 RLVSASDDKTLKVWDMRSGKCLK 117
>sp|Q86VZ2|WDR5B_HUMAN WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1
Length = 330
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 3/160 (1%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
++ + S D LV D+ L D ++GK + L GH ++ F ++P + +G+
Sbjct: 86 ISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSF 145
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D+T ++W+V+ K + L + + ++ F G+ + ++DA +G +
Sbjct: 146 DETVKIWEVKT-GKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKT 204
Query: 401 EIDFFG-EISGMTFSPDTEALFIGVWDRTYGSLLQYNRCR 439
+D +S + FSP+ + + D T L Y+R R
Sbjct: 205 LVDDDNPPVSFVKFSPNGKYILTATLDNTL-KLWDYSRGR 243
>sp|Q5RE95|WDR5B_PONAB WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1
Length = 330
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 3/160 (1%)
Query: 281 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLDFSFASAWHPDGRIFATGNQ 340
++ + S D LV D+ L D ++GK + L GH ++ F ++P + +G+
Sbjct: 86 ISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSF 145
Query: 341 DKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGNFMAMAEPADFVHVYDAKNGFEKEQ 400
D+T ++W+V+ K + L + + ++ F G+ + ++DA +G +
Sbjct: 146 DETVKIWEVKT-GKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKT 204
Query: 401 EIDFFG-EISGMTFSPDTEALFIGVWDRTYGSLLQYNRCR 439
+D +S + FSP+ + + D T L Y+R R
Sbjct: 205 LVDDDNPPVSFVKFSPNGKYILTATLDNTL-KLWDYSRGR 243
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 177,763,029
Number of Sequences: 539616
Number of extensions: 7773533
Number of successful extensions: 36527
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 514
Number of HSP's that attempted gapping in prelim test: 32347
Number of HSP's gapped (non-prelim): 3668
length of query: 448
length of database: 191,569,459
effective HSP length: 121
effective length of query: 327
effective length of database: 126,275,923
effective search space: 41292226821
effective search space used: 41292226821
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)