Your job contains 1 sequence.
>013189
MSTSWADSVSASENAAPASSNISALPRPTRSTYVPPHLRNKPPTSSEPPASSRESTEPAS
GPRWGSGSRPDFGRGQGYGSGGRSGSGWNNRSGGWDRREREVNPFGDDVGAEQPVAEEEN
TGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISI
GGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH
VEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRY
LALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFL
AVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADAL
EHWLYMNGFPATTIHGDRTQQRTSIEII
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013189
(448 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi... 1573 1.5e-161 1
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi... 1551 3.2e-159 1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi... 1503 4.0e-154 1
FB|FBgn0263231 - symbol:bel "belle" species:7227 "Drosoph... 1006 1.2e-104 2
UNIPROTKB|E2RRQ7 - symbol:DDX3X "Uncharacterized protein"... 996 1.5e-104 2
RGD|1309586 - symbol:RGD1309586 "similar to probable ATP-... 985 5.1e-104 2
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"... 993 6.5e-104 2
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"... 993 6.5e-104 2
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica... 993 6.5e-104 2
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"... 994 8.3e-104 2
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"... 993 1.1e-103 2
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"... 993 1.1e-103 2
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi... 987 3.6e-103 2
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po... 987 3.6e-103 2
UNIPROTKB|B4DXX7 - symbol:DDX3Y "Uncharacterized protein"... 987 9.5e-103 2
UNIPROTKB|O15523 - symbol:DDX3Y "ATP-dependent RNA helica... 987 9.5e-103 2
MGI|MGI:91842 - symbol:D1Pas1 "DNA segment, Chr 1, Pasteu... 985 1.2e-102 2
UNIPROTKB|I3LDV0 - symbol:DDX3Y "Uncharacterized protein"... 982 3.2e-102 2
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795... 973 3.2e-102 2
ZFIN|ZDB-GENE-030131-1565 - symbol:ddx3 "DEAD (Asp-Glu-Al... 966 1.4e-101 2
UNIPROTKB|D3IVZ2 - symbol:DDX3Y "Uncharacterized protein"... 973 2.8e-101 2
MGI|MGI:1349406 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) bo... 969 7.5e-101 2
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme... 939 2.0e-100 2
RGD|2314437 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box po... 952 4.7e-99 2
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ... 903 9.8e-97 2
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu... 911 6.9e-96 2
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ... 891 3.0e-93 2
DICTYBASE|DDB_G0283661 - symbol:ddx3 "DEAD/DEAH box helic... 888 7.0e-92 2
POMBASE|SPCC1795.11 - symbol:sum3 "translation initiation... 862 3.4e-90 2
WB|WBGene00002244 - symbol:laf-1 species:6239 "Caenorhabd... 818 5.7e-84 2
WB|WBGene00006888 - symbol:vbh-1 species:6239 "Caenorhabd... 834 3.1e-83 1
ZFIN|ZDB-GENE-990415-272 - symbol:vasa "vasa homolog" spe... 787 3.0e-78 1
UNIPROTKB|Q91372 - symbol:ddx4 "Probable ATP-dependent RN... 763 9.5e-78 2
UNIPROTKB|Q90ZF6 - symbol:olvas "VASA" species:8090 "Oryz... 781 1.3e-77 1
UNIPROTKB|D4ADV9 - symbol:Ddx4 "Probable ATP-dependent RN... 766 5.0e-76 1
UNIPROTKB|F1MYC6 - symbol:DDX4 "Probable ATP-dependent RN... 764 8.1e-76 1
UNIPROTKB|Q5W5U4 - symbol:DDX4 "Probable ATP-dependent RN... 764 8.1e-76 1
UNIPROTKB|D6RDK4 - symbol:DDX4 "Probable ATP-dependent RN... 764 8.1e-76 1
UNIPROTKB|Q9NQI0 - symbol:DDX4 "Probable ATP-dependent RN... 764 8.1e-76 1
MGI|MGI:102670 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box ... 764 8.1e-76 1
UNIPROTKB|E2RMU5 - symbol:DDX4 "Uncharacterized protein" ... 762 1.3e-75 1
UNIPROTKB|Q6GWX0 - symbol:DDX4 "Probable ATP-dependent RN... 758 3.5e-75 1
UNIPROTKB|Q4R5S7 - symbol:DDX4 "Probable ATP-dependent RN... 751 1.9e-74 1
RGD|1308793 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box pol... 750 2.5e-74 1
UNIPROTKB|Q64060 - symbol:Ddx4 "Probable ATP-dependent RN... 750 2.5e-74 1
UNIPROTKB|Q3MSQ8 - symbol:ddx4 "Probable ATP-dependent RN... 741 2.2e-73 1
UNIPROTKB|F1N991 - symbol:DDX4 "Uncharacterized protein" ... 711 3.3e-70 1
UNIPROTKB|F1NL04 - symbol:DDX4 "Uncharacterized protein" ... 711 3.3e-70 1
UNIPROTKB|B2C6E9 - symbol:B2C6E9 "VASA" species:9337 "Tri... 709 5.5e-70 1
UNIPROTKB|D6RCM4 - symbol:DDX4 "Probable ATP-dependent RN... 704 1.8e-69 1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 610 1.7e-59 1
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 587 2.0e-59 2
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 587 2.0e-59 2
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 587 2.0e-59 2
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 587 2.0e-59 2
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi... 539 8.4e-59 3
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 602 1.2e-58 1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 600 1.9e-58 1
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ... 598 3.2e-58 1
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ... 598 3.2e-58 1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 598 3.2e-58 1
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 597 4.0e-58 1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 594 8.4e-58 1
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 594 8.4e-58 1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 593 1.1e-57 1
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ... 592 1.4e-57 1
RGD|619906 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box heli... 592 1.4e-57 1
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ... 591 1.7e-57 1
UNIPROTKB|F1PEA6 - symbol:DDX5 "Uncharacterized protein" ... 591 1.7e-57 1
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN... 591 1.7e-57 1
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN... 591 1.7e-57 1
UNIPROTKB|Q4R6M5 - symbol:DDX5 "Probable ATP-dependent RN... 591 1.7e-57 1
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN... 591 1.7e-57 1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 591 1.7e-57 1
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 571 2.0e-57 2
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 587 4.6e-57 1
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 587 4.6e-57 1
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R... 587 4.6e-57 1
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 587 4.6e-57 1
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 587 4.6e-57 1
UNIPROTKB|A5A6J2 - symbol:DDX5 "Probable ATP-dependent RN... 584 9.6e-57 1
WB|WBGene00010260 - symbol:F58E10.3 species:6239 "Caenorh... 581 2.0e-56 1
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 579 3.3e-56 1
WB|WBGene00001598 - symbol:glh-1 species:6239 "Caenorhabd... 575 8.6e-56 1
UNIPROTKB|P34689 - symbol:glh-1 "ATP-dependent RNA helica... 575 8.6e-56 1
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi... 570 2.9e-55 1
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 563 1.6e-54 1
WB|WBGene00001599 - symbol:glh-2 species:6239 "Caenorhabd... 569 2.3e-54 1
UNIPROTKB|Q966L9 - symbol:glh-2 "ATP-dependent RNA helica... 569 2.3e-54 1
FB|FBgn0029979 - symbol:CG10777 species:7227 "Drosophila ... 564 6.8e-54 1
WB|WBGene00001600 - symbol:glh-3 species:6239 "Caenorhabd... 555 1.1e-53 1
UNIPROTKB|O01836 - symbol:glh-3 "ATP-dependent RNA helica... 555 1.1e-53 1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph... 554 1.5e-53 1
ASPGD|ASPL0000051195 - symbol:AN1634 species:162425 "Emer... 399 1.0e-52 3
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi... 554 1.5e-52 1
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 535 1.5e-51 1
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 535 1.5e-51 1
TAIR|locus:2057640 - symbol:AT2G33730 species:3702 "Arabi... 535 1.5e-51 1
DICTYBASE|DDB_G0288501 - symbol:ddx42 "DEAD/DEAH box heli... 542 2.0e-51 1
GENEDB_PFALCIPARUM|PF08_0096 - symbol:PF08_0096 "RNA heli... 541 2.1e-51 1
WARNING: Descriptions of 760 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 1573 (558.8 bits), Expect = 1.5e-161, P = 1.5e-161
Identities = 314/449 (69%), Positives = 352/449 (78%)
Query: 2 STSWADXXXXXXXXXXXXXXXXXLPRPTRSTYVPPHLRNKPPTSS-EPPASSRESTEPAS 60
S SWAD RP+R+ YVPPHLR++ P+S P+
Sbjct: 3 SNSWADVSESERAPSGGGWGYS---RPSRTNYVPPHLRSRTPSSEFVAPSPGNNDRGGYG 59
Query: 61 GPRWGSGSRPDFXXXXXXXXXXXXXXXXXXXXXXX--DRREREVNPFGDDVGAEQPVAEE 118
G G G R DRR+ E NPFG+D A+ V E+
Sbjct: 60 GANSGYGGRGQGYGGRGSGYGGRGGPVGGWNARSGGWDRRDTETNPFGNDGNADPAVNEQ 119
Query: 119 ENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI 178
ENT INF+AYEDIP+ETSG+NVPP VNTFAEIDLGEALNLNI+RCKYVKPTPVQR+AIPI
Sbjct: 120 ENTVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPI 179
Query: 179 SIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQ 238
GRDLMACAQTGSGKTAAFCFPIISGIM++Q+++RPRG R VYPLA+IL+PTREL+ Q
Sbjct: 180 LAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQ 239
Query: 239 IHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMI 298
IH EA+KFSYQTGVKVVVAYGG P+NQQ+RELERGVDILVATPGRL DLLER RVSLQM+
Sbjct: 240 IHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMV 299
Query: 299 RYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYI 358
R+LALDEADRMLDMGFEPQIRKIVQQMDMPPPG+RQTMLFSATFP+EIQRLASDFL+NYI
Sbjct: 300 RFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYI 359
Query: 359 FLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGAD 418
FLAVGRVGSSTDLIVQRVEFVH+SDKRSHLMDLLHAQ NG GKQALTLVFVETKKGAD
Sbjct: 360 FLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGAD 419
Query: 419 ALEHWLYMNGFPATTIHGDRTQQRTSIEI 447
+LE+WL +NGFPATTIHGDR+QQ + +
Sbjct: 420 SLENWLCINGFPATTIHGDRSQQEREVAL 448
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 1551 (551.0 bits), Expect = 3.2e-159, P = 3.2e-159
Identities = 314/424 (74%), Positives = 346/424 (81%)
Query: 27 RPTRSTYVPPHLRNKPPTSSEPPASSRESTEPAS-GPRWGSGSRPDFXXXXXXXXXXXXX 85
RP S V P N PP+ SR + + G G G R D
Sbjct: 38 RPAASEPVAPLPANDRVGYGGPPSGSRWAPGGSGVGVGGGGGYRADAGRPGSGSGYGGRG 97
Query: 86 XXXXXXXXXX-DRREREVNPFGDDVGAEQPV-AEEENTGINFDAYEDIPVETSGENVPPA 143
DRREREVNPF +D +P E++NT INFDAYEDIP+ETSG+NVPP
Sbjct: 98 GGGWNNRSGGWDRREREVNPFENDDSEPEPAFTEQDNTVINFDAYEDIPIETSGDNVPPP 157
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI + GRDLMACAQTGSGKTAAFCFPI
Sbjct: 158 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPI 217
Query: 204 ISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
ISGIM++Q+VQRPRGSRTVYPLA+IL+PTREL+SQIH EAKKFSYQTGVKVVVAYGG PI
Sbjct: 218 ISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPI 277
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
NQQLRELERGVDILVATPGRL DLLERARVS+QMIR+LALDEADRMLDMGFEPQIRKIV+
Sbjct: 278 NQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVE 337
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
QMDMPP G+RQT+LFSATFP+EIQRLA+DFLANYIFLAVGRVGSSTDLIVQRVEFV +SD
Sbjct: 338 QMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSD 397
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQRT 443
KRSHLMDLLHAQ NG+ GKQALTLVFVETK+GAD+LE+WL +NGFPAT+IHGDRTQQ
Sbjct: 398 KRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQER 457
Query: 444 SIEI 447
+ +
Sbjct: 458 EVAL 461
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 45/140 (32%), Positives = 54/140 (38%)
Query: 1 MSTSWADXXXXXXXXXXXXXXXXXLPRPTRSTYVPPHLRNKPPTSSEP----PASSREST 56
MS SWAD P+R YVPPHLRN+P +SEP PA+ R
Sbjct: 1 MSASWADVADSENTGSGSSNQNS---HPSRPAYVPPHLRNRP-AASEPVAPLPANDRVGY 56
Query: 57 E-PASGPRW-----------GSGSRPDFXXXXXXXXXXXXXXXXXXXXXXX-DRREREVN 103
P SG RW G G R D DRREREVN
Sbjct: 57 GGPPSGSRWAPGGSGVGVGGGGGYRADAGRPGSGSGYGGRGGGGWNNRSGGWDRREREVN 116
Query: 104 PFGDDVGAEQPVAEEENTGI 123
PF +D +P E++ +
Sbjct: 117 PFENDDSEPEPAFTEQDNTV 136
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 1503 (534.1 bits), Expect = 4.0e-154, P = 4.0e-154
Identities = 307/437 (70%), Positives = 342/437 (78%)
Query: 29 TRSTYVPPHLRNKP--PTSSEPPASSREST--EPASGPRW-----------GSGSRPDFX 73
++ YVPPHLRN+P P ++ P + +PA G RW G G R D
Sbjct: 18 SKPPYVPPHLRNRPSEPVAAPLPQNDHAGYGGQPA-GSRWAPPSSGGGGASGGGYRNDGG 76
Query: 74 XXXXXXXXXXXXXXXXXXXXXX---DRREREVNPFGDDVGAEQPVAEEENTGINFDAYED 130
DRREREVNPFGDD E E+ENTGINFDAYED
Sbjct: 77 RTGYGYGAGGGGGGGGGWNNRSGGWDRREREVNPFGDDAELEPVFTEQENTGINFDAYED 136
Query: 131 IPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQ 190
IPVETSG +VPP VNTFA+IDLG+ALNLNIRRCKYV+PTPVQRHAIPI + RDLMACAQ
Sbjct: 137 IPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQ 196
Query: 191 TGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQT 250
TGSGKTAAFCFPIISGIM++Q+V+RPRGSR VYP A+IL+PTREL+ QIH EAKKFSYQT
Sbjct: 197 TGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQT 256
Query: 251 GVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
GVKVVVAYGG PI+QQLRELERG DILVATPGRL DLLERARVS+QMIR+LALDEADRML
Sbjct: 257 GVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRML 316
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFEPQIRKIV+QMDMPP G+RQTMLFSATFP +IQRLA+DF++NYIFLAVGRVGSSTD
Sbjct: 317 DMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTD 376
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
LI QRVEFV ESDKRSHLMDLLHAQ KQ+LTLVFVETK+GAD LE+WL MN FP
Sbjct: 377 LITQRVEFVQESDKRSHLMDLLHAQ--RETQDKQSLTLVFVETKRGADTLENWLCMNEFP 434
Query: 431 ATTIHGDRTQQRTSIEI 447
AT+IHGDRTQQ + +
Sbjct: 435 ATSIHGDRTQQEREVAL 451
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 1006 (359.2 bits), Expect = 1.2e-104, Sum P(2) = 1.2e-104
Identities = 195/328 (59%), Positives = 256/328 (78%)
Query: 120 NTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPIS 179
NTGINFD YEDIPVE +G+NVPP + +F ++ L E + N+ +Y KPTPVQ+HAIPI
Sbjct: 270 NTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPII 329
Query: 180 IGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTV-----YPLALILAPTRE 234
I GRDLMACAQTGSGKTAAF PI++ + +V P+ +R YPL L+LAPTRE
Sbjct: 330 INGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRE 389
Query: 235 LSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVS 294
L++QI EAKKF+Y++ ++ V YGG ++Q+REL+RG ++VATPGRL D++ R +V
Sbjct: 390 LATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVG 449
Query: 295 LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFL 354
L+ IR+L LDEADRMLDMGFEPQIR+IV+Q++MPP G RQT++FSATFPK+IQ LASDFL
Sbjct: 450 LENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFL 509
Query: 355 ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGV-HGKQALTLVFVET 413
+NYIFLAVGRVGS+++ I Q + +V+E DKRS+L+DLL + + +G + K +LTL+FVET
Sbjct: 510 SNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLL-SSIRDGPEYTKDSLTLIFVET 568
Query: 414 KKGADALEHWLYMNGFPATTIHGDRTQQ 441
KKGAD+LE +LY P T+IHGDRTQ+
Sbjct: 569 KKGADSLEEFLYQCNHPVTSIHGDRTQK 596
Score = 50 (22.7 bits), Expect = 1.2e-104, Sum P(2) = 1.2e-104
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 29 TRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWGSGSR 69
T YVPPHLR ++ A+ ES G G SR
Sbjct: 42 TGGVYVPPHLRGGGGNNN---AADAESQGQGQGQGQGFDSR 79
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 996 (355.7 bits), Expect = 1.5e-104, Sum P(2) = 1.5e-104
Identities = 200/338 (59%), Positives = 253/338 (74%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 189 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 248
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 249 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQY 308
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 309 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 368
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 369 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 428
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A + GK
Sbjct: 429 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATES----GK 484
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q+
Sbjct: 485 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 522
Score = 59 (25.8 bits), Expect = 1.5e-104, Sum P(2) = 1.5e-104
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 29 TRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPR-WGSGSRPD 71
++ Y+PPHLRN+ T + ++ RE ++ R + +G R D
Sbjct: 34 SKGRYIPPHLRNREATKGK--SNCRERSKGRGSIRGFRTGRRLD 75
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 985 (351.8 bits), Expect = 5.1e-104, Sum P(2) = 5.1e-104
Identities = 198/338 (58%), Positives = 251/338 (74%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 145 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 204
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 205 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQY 264
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 265 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 324
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 325 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 384
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E+DKRS L+DLL+A GK
Sbjct: 385 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNAT------GK 438
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+L LVFVETKKGAD+LE +LY G+ T+IHGDR+Q+
Sbjct: 439 DSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 476
Score = 65 (27.9 bits), Expect = 5.1e-104, Sum P(2) = 5.1e-104
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 29 TRSTYVPPHLRNKPPT-SSEPPASSRESTEPASGPRWGSGS 68
++ Y+PPHLRN+ T +S SSR S + + +GS S
Sbjct: 34 SKGRYIPPHLRNREATKASYDKDSSRWSKDKDAYSSFGSRS 74
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 993 (354.6 bits), Expect = 6.5e-104, Sum P(2) = 6.5e-104
Identities = 200/338 (59%), Positives = 252/338 (74%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 146 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 205
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 206 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQY 265
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 266 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 325
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 326 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 385
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A GK
Sbjct: 386 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT------GK 439
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q+
Sbjct: 440 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 477
Score = 56 (24.8 bits), Expect = 6.5e-104, Sum P(2) = 6.5e-104
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 29 TRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWGS-GSRPD 71
++ Y+PPHLRN+ T S + + S GSR D
Sbjct: 34 SKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRSD 77
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 993 (354.6 bits), Expect = 6.5e-104, Sum P(2) = 6.5e-104
Identities = 200/338 (59%), Positives = 252/338 (74%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 206
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQY 266
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 326
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 386
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A GK
Sbjct: 387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT------GK 440
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q+
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 478
Score = 56 (24.8 bits), Expect = 6.5e-104, Sum P(2) = 6.5e-104
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 29 TRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWGS-GSRPD 71
++ Y+PPHLRN+ T S + + S GSR D
Sbjct: 34 SKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRSD 77
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 993 (354.6 bits), Expect = 6.5e-104, Sum P(2) = 6.5e-104
Identities = 200/338 (59%), Positives = 252/338 (74%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 206
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQY 266
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 326
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 386
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A GK
Sbjct: 387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT------GK 440
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q+
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 478
Score = 56 (24.8 bits), Expect = 6.5e-104, Sum P(2) = 6.5e-104
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 29 TRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWGS-GSRPD 71
++ Y+PPHLRN+ T S + + S GSR D
Sbjct: 34 SKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRSD 77
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 994 (355.0 bits), Expect = 8.3e-104, Sum P(2) = 8.3e-104
Identities = 201/339 (59%), Positives = 252/339 (74%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++D+GE + NI +Y +PTPV
Sbjct: 123 EQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPV 182
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPR-GSRTV 222
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R R G R
Sbjct: 183 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDALRAMKATNGRYGRRKQ 242
Query: 223 YPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPG 282
YP++L+LAPTREL+ QI+ EA+KF+Y++ V+ V YGGA I QQ+R+LERG +LVATPG
Sbjct: 243 YPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPG 302
Query: 283 RLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATF 342
RLVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATF
Sbjct: 303 RLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATF 362
Query: 343 PKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHG 402
PKEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A G
Sbjct: 363 PKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNAT------G 416
Query: 403 KQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
K +LTLVFVETKKGADALE +LY G+ T+IHGDR+Q+
Sbjct: 417 KDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQR 455
Score = 54 (24.1 bits), Expect = 8.3e-104, Sum P(2) = 8.3e-104
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 29 TRSTYVPPHLRNKPPTS----SEPPASSRESTEPAS-GPRWGSGSRPDF 72
++ Y+PPHLRN+ + S ++SR+ +S G R G++ F
Sbjct: 20 SKGRYIPPHLRNREASKQGFDSGGWSTSRDKDAYSSFGARSDRGAKSSF 68
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 993 (354.6 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 200/338 (59%), Positives = 251/338 (74%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++D+GE + NI +Y +PTPV
Sbjct: 125 EQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPV 184
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 185 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDALRAMKENGRYGRRKQY 244
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KF+Y++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 245 PISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 304
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 305 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 364
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A GK
Sbjct: 365 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNAT------GK 418
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+LTLVFVETKKGADALE +LY G+ T+IHGDR+Q+
Sbjct: 419 DSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQR 456
Score = 54 (24.1 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 29 TRSTYVPPHLRNKPPTS----SEPPASSRESTEPAS-GPRWGSGSRPDF 72
++ Y+PPHLRN+ + S ++SR+ +S G R G++ F
Sbjct: 20 SKGRYIPPHLRNREASKQGFDSGGWSTSRDKDAYSSFGARSDRGAKSSF 68
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 993 (354.6 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 200/338 (59%), Positives = 252/338 (74%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 206
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQY 266
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 326
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 386
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A GK
Sbjct: 387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT------GK 440
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q+
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 478
Score = 54 (24.1 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 29 TRSTYVPPHLRNKPPT 44
++ Y+PPHLRN+ T
Sbjct: 34 SKGRYIPPHLRNREAT 49
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 987 (352.5 bits), Expect = 3.6e-103, Sum P(2) = 3.6e-103
Identities = 199/338 (58%), Positives = 251/338 (74%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 206
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQY 266
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGR 326
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 386
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A GK
Sbjct: 387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNAT------GK 440
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q+
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 478
Score = 55 (24.4 bits), Expect = 3.6e-103, Sum P(2) = 3.6e-103
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 29 TRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWGS-GSRPD 71
++ Y+PPHLRN+ T S + + S GSR D
Sbjct: 34 SKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRGD 77
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 987 (352.5 bits), Expect = 3.6e-103, Sum P(2) = 3.6e-103
Identities = 199/338 (58%), Positives = 251/338 (74%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 206
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQY 266
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGR 326
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 386
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A GK
Sbjct: 387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNAT------GK 440
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q+
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 478
Score = 55 (24.4 bits), Expect = 3.6e-103, Sum P(2) = 3.6e-103
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 29 TRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWGS-GSRPD 71
++ Y+PPHLRN+ T S + + S GSR D
Sbjct: 34 SKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRGD 77
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 987 (352.5 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 200/338 (59%), Positives = 252/338 (74%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + F++ID+GE + NI +Y +PTPV
Sbjct: 142 EQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPV 201
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE------QYV-QRPR-GSRTVY 223
Q+HAIPI G RDLMACAQTGSGKTAAF PI+S I + + V + R G R Y
Sbjct: 202 QKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQY 261
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 262 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 321
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 322 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 381
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V + DKRS L+D+L G G
Sbjct: 382 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDIL------GATGS 435
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q+
Sbjct: 436 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 473
Score = 51 (23.0 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 29 TRSTYVPPHLRNK 41
++ Y+PPHLRN+
Sbjct: 31 SKGRYIPPHLRNR 43
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 987 (352.5 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 200/338 (59%), Positives = 252/338 (74%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + F++ID+GE + NI +Y +PTPV
Sbjct: 145 EQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPV 204
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE------QYV-QRPR-GSRTVY 223
Q+HAIPI G RDLMACAQTGSGKTAAF PI+S I + + V + R G R Y
Sbjct: 205 QKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQY 264
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 265 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 324
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 325 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 384
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V + DKRS L+D+L G G
Sbjct: 385 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDIL------GATGS 438
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q+
Sbjct: 439 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 476
Score = 51 (23.0 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 29 TRSTYVPPHLRNK 41
++ Y+PPHLRN+
Sbjct: 34 SKGRYIPPHLRNR 46
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 985 (351.8 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 198/338 (58%), Positives = 251/338 (74%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 146 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 205
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 206 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQY 265
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 266 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 325
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 326 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 385
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E+DKRS L+DLL+A GK
Sbjct: 386 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNAT------GK 439
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+L LVFVETKKGAD+LE +LY G+ T+IHGDR+Q+
Sbjct: 440 DSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 477
Score = 52 (23.4 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 29 TRSTYVPPHLRNKPPTSS-EPPASSRESTEPASGPRWGSGS 68
++ Y+PPHLRN+ + SR S + + +GS S
Sbjct: 34 SKGRYIPPHLRNREAAKAFYDKDGSRWSKDKDAYSSFGSRS 74
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 982 (350.7 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 200/338 (59%), Positives = 254/338 (75%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N P + +F+++++GE + NI +Y +PTPV
Sbjct: 148 EQELFSGGNTGINFEKYDDIPVEATGNNCPRHIESFSDVEMGEIIMGNIELTRYTRPTPV 207
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE------QYV-QRPR-GSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I + + V + R G R Y
Sbjct: 208 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQY 267
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 268 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 327
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 328 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 387
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A GK
Sbjct: 388 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT------GK 441
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q+
Sbjct: 442 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 479
Score = 51 (23.0 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 29 TRSTYVPPHLRNK 41
++ Y+PPHLRN+
Sbjct: 35 SKGRYIPPHLRNR 47
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 973 (347.6 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 200/357 (56%), Positives = 257/357 (71%)
Query: 97 RREREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEAL 156
R E P + E + NTGINF+ Y+DIPVE +G N P ++ F ++++GE +
Sbjct: 160 RDEDWSKPLPPNERLEHELFSGSNTGINFEKYDDIPVEATGHNGPQPIDRFHDLEMGEII 219
Query: 157 NLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE---QYV 213
NI +Y +PTPVQ+HAIPI RDLMACAQTGSGKTAAF P++S I + + +
Sbjct: 220 MGNINLSRYTRPTPVQKHAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQIYTDGPGEAL 279
Query: 214 QRPR---------GSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPIN 264
Q + G R YP++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I
Sbjct: 280 QAAKNSAQENGKYGRRKQYPISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIG 339
Query: 265 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 324
QQ+R+LERG +LVATPGRL+D++ER ++ L YL LDEADRMLDMGFEPQIR+IV+Q
Sbjct: 340 QQIRDLERGCHLLVATPGRLLDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQ 399
Query: 325 MDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDK 384
MPP G+RQTM+FSATFPKEIQ LA DFL +YIFLAVGRVGS+++ I Q+V +V E+DK
Sbjct: 400 DTMPPKGLRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDK 459
Query: 385 RSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
RS L+DLL+A GK +LTLVFVETKKGADALE +LY G+ T+IHGDR+Q+
Sbjct: 460 RSFLLDLLNAT------GKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQR 510
Score = 60 (26.2 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 29 TRSTYVPPHLRNKPPTSSEPP 49
T Y+PPHLRNK ++ P
Sbjct: 30 TGRRYIPPHLRNKEAAKNDAP 50
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 966 (345.1 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 198/343 (57%), Positives = 252/343 (73%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + NTGINF+ Y+DIPVE +G N P + +F ++D+GE + NI +Y +PTPV
Sbjct: 190 EHELFSASNTGINFEKYDDIPVEATGTNSPGHIESFHDVDMGEIIMGNITLSRYTRPTPV 249
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE---QYVQRPRGS--------- 219
Q++AIPI RDLMACAQTGSGKTAAF P++S I E + +Q + S
Sbjct: 250 QKYAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQIYSEGPGEALQATKASTQQENGKYV 309
Query: 220 -RTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILV 278
R YP++L+LAPTREL+ QI+ EA+KF+Y++ V+ V YGGA I QQ+R+LERG +LV
Sbjct: 310 RRKQYPISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 369
Query: 279 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLF 338
ATPGRLVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G RQTM+F
Sbjct: 370 ATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMMF 429
Query: 339 SATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVAN 398
SATFPKEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E+DKRS L+DLL+A
Sbjct: 430 SATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNAT--- 486
Query: 399 GVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
GK +LTLVFVETKKGADALE +LY G+ T+IHGDR+Q+
Sbjct: 487 ---GKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQR 526
Score = 61 (26.5 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 29 TRSTYVPPHLRNKPPTSSEPP 49
T Y+PPHLRNK + ++ P
Sbjct: 31 TGRRYIPPHLRNKDASKNDSP 51
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 973 (347.6 bits), Expect = 2.8e-101, Sum P(2) = 2.8e-101
Identities = 197/338 (58%), Positives = 251/338 (74%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++ +GE + NI +Y +PTPV
Sbjct: 147 EQELFSGGNTGINFEKYDDIPVEVTGNNCPPHIESFSDVAMGEIIMGNIELTRYTRPTPV 206
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE------QYVQRPR--GSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I + + V+ G R Y
Sbjct: 207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKESGRYGRRKQY 266
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVLPCVVYGGADIGQQIRDLERGCHLLVATPGR 326
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+I++Q MPP G+R TM+FSATFP
Sbjct: 327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIIEQDTMPPKGVRHTMMFSATFP 386
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E+DKRS L+DLL+A G
Sbjct: 387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNAT------GT 440
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q+
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 478
Score = 51 (23.0 bits), Expect = 2.8e-101, Sum P(2) = 2.8e-101
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 29 TRSTYVPPHLRNK 41
++ Y+PPHLRN+
Sbjct: 35 SKGRYIPPHLRNR 47
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 969 (346.2 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 197/338 (58%), Positives = 250/338 (73%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + F++I++GE + NI +Y +PTPV
Sbjct: 146 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIENFSDIEMGEIIMGNIELTRYTRPTPV 205
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE-------QYVQRPR-GSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I + + R G R Y
Sbjct: 206 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQY 265
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA QQ+R+LERG +LVATPGR
Sbjct: 266 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGR 325
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 326 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 385
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A GK
Sbjct: 386 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNAT------GK 439
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+LTLVFVETKKGAD+LE++L+ + T+IHGDR+Q+
Sbjct: 440 DSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQK 477
Score = 51 (23.0 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 29 TRSTYVPPHLRNK 41
++ Y+PPHLRN+
Sbjct: 35 SKGRYIPPHLRNR 47
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 939 (335.6 bits), Expect = 2.0e-100, Sum P(2) = 2.0e-100
Identities = 193/331 (58%), Positives = 239/331 (72%)
Query: 118 EENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIP 177
++NTGINF Y+DIPVE SG +VP VNTF L + L NI +Y PTPVQ+++IP
Sbjct: 159 KQNTGINFANYDDIPVEASGHDVPEPVNTFTNPPLDDHLISNIALARYQTPTPVQKYSIP 218
Query: 178 ISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGS-------RTVYPLALILA 230
I + GRDLMACAQTGSGKT F FPI+S + P + R YP +LILA
Sbjct: 219 IVMNGRDLMACAQTGSGKTGGFLFPILSQAYQNGPAAPPPSAAGQFGRQRKAYPTSLILA 278
Query: 231 PTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLER 290
PTREL SQI EA+KF+Y++ V+ V YGGA I QLR++ERG D+LVATPGRLVDL+ER
Sbjct: 279 PTRELVSQIFDEARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIER 338
Query: 291 ARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLA 350
R+SL I+YL LDEADRMLDMGFEPQIR+IV+ DMP RQT++FSATFP++IQ LA
Sbjct: 339 GRISLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPNVNDRQTLMFSATFPRDIQMLA 398
Query: 351 SDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
DFL +Y+FL+VGRVGS+++ I Q+VE+V + DKRS L+D+LH HG LTL+F
Sbjct: 399 RDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDILHT------HGTTGLTLIF 452
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
VETK+ ADAL +L FPAT IHGDRTQ+
Sbjct: 453 VETKRMADALSEFLINQRFPATAIHGDRTQR 483
Score = 77 (32.2 bits), Expect = 2.0e-100, Sum P(2) = 2.0e-100
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 26 PRPTRSTYVPPHLR------NKPPTSSEPPASSRESTEPASGPR---WGSGSRPDF 72
P R+ Y+PPHLR N S+ PP + S GPR W + + PDF
Sbjct: 25 PSGGRAAYIPPHLRQRQVNANGDGASAPPPGPTGGSWGGPRGPRGGNWANANAPDF 80
Score = 40 (19.1 bits), Expect = 1.6e-96, Sum P(2) = 1.6e-96
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 98 REREVNPFGDDVGAEQP 114
R+R+VN GD A P
Sbjct: 38 RQRQVNANGDGASAPPP 54
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 952 (340.2 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 193/338 (57%), Positives = 248/338 (73%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + N GINF+ Y+DIPVE +G N PP + F+++++GE + NI +Y +PTPV
Sbjct: 140 EQELFSGGNAGINFEKYDDIPVEATGNNCPPHIENFSDVEMGEIIMGNIELTRYTRPTPV 199
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE-------QYVQRPR-GSRTVY 223
Q+HAIPI RDLMACAQTGSG TAAF PI+S I + + R G R Y
Sbjct: 200 QKHAIPIIKEKRDLMACAQTGSGCTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQY 259
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA QQ+R+LERG +LVATPGR
Sbjct: 260 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGR 319
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 320 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 379
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A G+
Sbjct: 380 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNAT------GR 433
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+LTLVFVETKKGAD+LE++L+ + T+IHGDR+Q+
Sbjct: 434 DSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQK 471
Score = 51 (23.0 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 29 TRSTYVPPHLRNK 41
++ Y+PPHLRN+
Sbjct: 31 SKGRYIPPHLRNR 43
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 903 (322.9 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 184/331 (55%), Positives = 239/331 (72%)
Query: 119 ENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI 178
+++GINFD Y+DIPVE SG+ VP + +F L E L NI+ ++ KPTPVQ++++PI
Sbjct: 160 QSSGINFDNYDDIPVEASGDKVPEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPI 219
Query: 179 SIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR---------GSRTVYPLALIL 229
GRDLMACAQTGSGKT F FP++S E Y++ P S VYP L++
Sbjct: 220 VAAGRDLMACAQTGSGKTGGFLFPVLS----ESYMKGPAPVPESNGAFSSHKVYPTILVM 275
Query: 230 APTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 289
APTREL SQI+ E+KKFSY++ V+ V YGGA I QQ+R ++RG D+LVATPGRL DLL+
Sbjct: 276 APTRELVSQIYEESKKFSYRSWVRACVVYGGADIGQQMRNMDRGCDLLVATPGRLKDLLD 335
Query: 290 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRL 349
R +VSL IRYL LDEADRMLDMGFEPQIR IV++ DMP RQT++FSATFP++IQ L
Sbjct: 336 RGKVSLANIRYLVLDEADRMLDMGFEPQIRYIVEECDMPAVKDRQTLMFSATFPRDIQML 395
Query: 350 ASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLV 409
A DFL +Y+FL+VGRVGS+++ I Q++ +V + +K+S ++DLL A NG LT+V
Sbjct: 396 ARDFLKDYVFLSVGRVGSTSENITQKILYVEDDEKKSVILDLLSAN-ENG------LTIV 448
Query: 410 FVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
F ETK+ AD L +LY GFPAT IHGDR+Q
Sbjct: 449 FTETKRMADNLADYLYDQGFPATAIHGDRSQ 479
Score = 78 (32.5 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 27 RPTRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWG 65
R RS YVPPHLRN+ ++ +SS S P G + G
Sbjct: 27 RGGRSQYVPPHLRNRQGGGNQSGSSSESSDVPFGGSQRG 65
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 911 (325.7 bits), Expect = 6.9e-96, Sum P(2) = 6.9e-96
Identities = 186/327 (56%), Positives = 238/327 (72%)
Query: 119 ENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI 178
+++GINFD Y+DIPV+ SG++VP + F L L NI+ ++ KPTPVQ++++PI
Sbjct: 116 QSSGINFDNYDDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPI 175
Query: 179 SIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP--RGS---RTVYPLALILAPTR 233
GRDLMACAQTGSGKT F FP++S + +P +GS R YP A+I+APTR
Sbjct: 176 VANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTR 235
Query: 234 ELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARV 293
EL++QI EAKKF+Y++ VK V YGG+PI QLRE+ERG D+LVATPGRL DLLER ++
Sbjct: 236 ELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKI 295
Query: 294 SLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDF 353
SL ++YL LDEADRMLDMGFEPQIR IV+ DM P G RQT++FSATFP +IQ LA DF
Sbjct: 296 SLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDF 355
Query: 354 LANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVET 413
L++YIFL+VGRVGS+++ I Q+V +V DK+S L+DLL A +G LTL+FVET
Sbjct: 356 LSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSAST-DG------LTLIFVET 408
Query: 414 KKGADALEHWLYMNGFPATTIHGDRTQ 440
K+ AD L +L M F AT IHGDRTQ
Sbjct: 409 KRMADQLTDFLIMQNFRATAIHGDRTQ 435
Score = 62 (26.9 bits), Expect = 6.9e-96, Sum P(2) = 6.9e-96
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 33 YVPPHLRNKPPTSSEPPASSRESTEPASGPRWGSGS 68
YVPPHLR KP ++ ++ + +G R G GS
Sbjct: 21 YVPPHLRGKPRSARNNSSNYNNNNGGYNGGR-GGGS 55
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 891 (318.7 bits), Expect = 3.0e-93, Sum P(2) = 3.0e-93
Identities = 185/326 (56%), Positives = 235/326 (72%)
Query: 120 NTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPIS 179
++GI FD Y++IPV+ SG++VP + F+ L E L NI+ + KPTPVQ+++IPI
Sbjct: 129 SSGIKFDNYDNIPVDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIV 188
Query: 180 IGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG-----SRTVYPLALILAPTRE 234
GRDLMACAQTGSGKT F FP+ + + R P SR YP AL+LAPTRE
Sbjct: 189 TKGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRE 248
Query: 235 LSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVS 294
L++QI EA+KF+Y++ V+ V YGGAPI Q+RE++RG D+LVATPGRL DLLER +VS
Sbjct: 249 LATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVS 308
Query: 295 LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFL 354
L I+YL LDEADRMLDMGFEPQIR IV++ DMP RQT++FSATFP +IQ LA DFL
Sbjct: 309 LANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFL 368
Query: 355 ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETK 414
NYIFL+VGRVGS+++ I QR+ +V + DK+S L+DLL A+ H + LTL+FVETK
Sbjct: 369 DNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLLSAE-----H--KGLTLIFVETK 421
Query: 415 KGADALEHWLYMNGFPATTIHGDRTQ 440
+ AD L +L M F AT IHGDRTQ
Sbjct: 422 RMADQLTDFLIMQNFKATAIHGDRTQ 447
Score = 57 (25.1 bits), Expect = 3.0e-93, Sum P(2) = 3.0e-93
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 30 RSTYVPPHLRNKPPTSSEPPASSRE 54
+S+YVPPHLR++ S E +E
Sbjct: 24 KSSYVPPHLRSRGKPSFERSTPKQE 48
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 888 (317.7 bits), Expect = 7.0e-92, Sum P(2) = 7.0e-92
Identities = 205/413 (49%), Positives = 255/413 (61%)
Query: 35 PPHLRNKPPTSSEPPASSRESTEPASGPRWGSGSRPDFXXXXXXXXXXXXXXXXXXXXXX 94
PP R + S + SR + G R GSGS F
Sbjct: 140 PP--RGNSYSYSPNNSFSRGGNQGGYGNRGGSGS--SFGKPANKNDRYYDRWSNFRDSRN 195
Query: 95 XDRREREVNPFGDDVGAEQPVAEEENTGINFDAYED--IPVETSGENVPPAVNTFAEIDL 152
+RE + E ++N GI+F+AY+D I +ETS E++ +N+FA++DL
Sbjct: 196 HPEMKREFIDLEEHKAEEIFKKNDDNIGIDFNAYDDDDISIETS-EHICAPLNSFADVDL 254
Query: 153 GEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQY 212
G+ L NI+ KY KPTPVQ+ A+PI + RDLMACAQTGSGKTAAF FPIISGI+ +
Sbjct: 255 GDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFPIISGILLDGA 314
Query: 213 VQRPRG-----SRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQL 267
+ P R P AL+LAPTREL+ QI EA KFSY + V VV YGGA + Q+
Sbjct: 315 PEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEANKFSYGSPVSSVVIYGGAEVFHQI 374
Query: 268 RELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDM 327
EL+RG DILVAT GRLVDLL R RVSL I+YL LDEADRMLDMGFEPQIR+I+ + DM
Sbjct: 375 NELDRGCDILVATTGRLVDLLMRGRVSLSKIKYLVLDEADRMLDMGFEPQIRQIISEFDM 434
Query: 328 PPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSH 387
P RQT++FSATFPK+IQ LA+DFL NYIFL VG VG+ T I QR+E+V E DK S+
Sbjct: 435 PGCRDRQTLMFSATFPKQIQNLAADFLYNYIFLKVGVVGT-TQNITQRIEYVVEEDKNSY 493
Query: 388 LMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
L+D L ++G L L+FVETK+ D L ++L FP T IHGD TQ
Sbjct: 494 LLDYLSGLKSDG------LCLIFVETKRSCDTLTYFLNQRNFPTTCIHGDLTQ 540
Score = 47 (21.6 bits), Expect = 7.0e-92, Sum P(2) = 7.0e-92
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 29 TRSTYVPPHLRNKPPTSSEPPASSRE 54
T YVPP RNK SS SSR+
Sbjct: 41 TSEPYVPPSRRNKMNNSS---GSSRD 63
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 862 (308.5 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 179/330 (54%), Positives = 231/330 (70%)
Query: 120 NTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPIS 179
+TGINF+ Y+DIPVE SG ++ P VN F L L NI+ Y +PTPVQ+++IPI
Sbjct: 145 STGINFEKYDDIPVEVSGGDIEP-VNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIV 203
Query: 180 IGGRDLMACAQTGSGKTAAFCFPIIS--------GIMREQYVQRPRGSRTVYPLALILAP 231
GRDLMACAQTGSGKTA F FPI+S + +Q R YP LILAP
Sbjct: 204 TSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAP 263
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL QIH E++KF Y++ V+ YGGA I Q+R++++G D+L ATPGRLVDL++R
Sbjct: 264 TRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRG 323
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
R+SL I++L LDEADRMLDMGFEPQIR IV+ DM RQT++FSATFP++IQ LA
Sbjct: 324 RISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLAR 383
Query: 352 DFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFV 411
DFL +Y+FL+VGRVGS+++ I Q+V V +S+KRS+L+D+LH G LTL+FV
Sbjct: 384 DFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLLDILHTLPPEG------LTLIFV 437
Query: 412 ETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
ETK+ AD L +L + FPAT+IHGDRTQ+
Sbjct: 438 ETKRMADTLTDYLLNSNFPATSIHGDRTQR 467
Score = 57 (25.1 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 25 LPRPTRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPR 63
+ RP + Y+PP R+KP + P ES R
Sbjct: 24 ISRPRK--YIPPFARDKPSAGAAPAVGDDESVSSRGSSR 60
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 818 (293.0 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 170/341 (49%), Positives = 234/341 (68%)
Query: 108 DVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVK 167
D EQ + + +GINFD YE+IPVE +G++VP ++ F+++ L E + NI+ Y +
Sbjct: 194 DERIEQELFSGQLSGINFDKYEEIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDR 253
Query: 168 PTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE------QYVQRPRGSRT 221
PTPVQ+++IP GGRDLM+CAQTGSGKTAAF P+++ I+++ + V G +
Sbjct: 254 PTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKK 313
Query: 222 VYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAP-INQQLRELERGVDILVAT 280
YP AL+L+PTRELS QI E++KF+Y+T + + YGG Q+ +L G IL+AT
Sbjct: 314 QYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIAT 373
Query: 281 PGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSA 340
PGRL+D++++ + ++ RYL LDEADRMLDMGFEPQIR+IV+ MP R T +FSA
Sbjct: 374 PGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSA 433
Query: 341 TFPKEIQRLASDFLA-NYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANG 399
TFPKEIQ LA DFL NY+FLAVGRVGS+++ I+Q++ +V E +KRS+LMDLL A
Sbjct: 434 TFPKEIQLLAQDFLKENYVFLAVGRVGSTSENIMQKIVWVEEDEKRSYLMDLLDAT---- 489
Query: 400 VHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
G +LTLVFVETK+GA L ++L + TIHGD Q
Sbjct: 490 --GDSSLTLVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQ 528
Score = 42 (19.8 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 33 YVPPHLR 39
YVPPHLR
Sbjct: 22 YVPPHLR 28
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 179/337 (53%), Positives = 229/337 (67%)
Query: 111 AEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTP 170
+E + ++GINFD YE+IPVE SG++VP A+ F E G A+ N+ R Y KPTP
Sbjct: 105 SESNLFHRTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTP 164
Query: 171 VQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMR--EQYVQRP---RGSRTVYPL 225
VQ+H+IP + RDLM+CAQTGSGKTAAF PII I+ V+ P G RT YP
Sbjct: 165 VQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPC 224
Query: 226 ALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAP-INQQLRELERGVDILVATPGRL 284
AL+L+PTREL+ QIH EA KFSY++ ++ + YGG Q+ L G IL+ATPGRL
Sbjct: 225 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 284
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D++E+ + L RYL LDEADRMLDMGFEPQIRKIV Q MPP R T +FSATFPK
Sbjct: 285 IDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQ-GMPPKTARTTAMFSATFPK 343
Query: 345 EIQRLASDFLA-NYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
EIQ LA DFL NYIFLAVGRVGS+++ I QR+ +V+E +KRS+LM++L + H +
Sbjct: 344 EIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMNE-----HSE 398
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
L LVFVETK+GA+ L ++L + +IHGD Q
Sbjct: 399 N-LVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQ 434
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 167/331 (50%), Positives = 220/331 (66%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+DI V+ SG N P A+ TF E L ++L+ N+ + YVKPTPV
Sbjct: 244 ESSIFSHYATGINFDKYDDILVDVSGSNPPKAIMTFEEAGLCDSLSKNVSKSGYVKPTPV 303
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+H IPI GRDLMACAQTGSGKTAAF PI+ M + V + S P A+I+AP
Sbjct: 304 QKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQRFMTDG-VAASKFSEIQEPEAIIVAP 362
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KF+Y T V+ VV YGG +RE+ +G ++L ATPGRL DL+ R
Sbjct: 363 TRELINQIYLEARKFAYGTCVRPVVVYGGINTGYTIREVLKGCNVLCATPGRLHDLIGRG 422
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L +RYL LDEADRMLDMGFEP++RK+V MP RQT++FSAT+P++IQR+A+
Sbjct: 423 KIGLSKVRYLVLDEADRMLDMGFEPEMRKLVASPGMPSKEERQTLMFSATYPEDIQRMAA 482
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
DFL +YIFLAVG VG + + Q V V + KR L++LL A G + T+VF
Sbjct: 483 DFLKVDYIFLAVGVVGGACSDVEQTVVQVDQYSKRDQLLELLRAT------GNER-TMVF 535
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
VETK+ AD + +L T+IHGDR Q+
Sbjct: 536 VETKRSADFIATFLCQEKISTTSIHGDREQR 566
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 763 (273.6 bits), Expect = 9.5e-78, Sum P(2) = 9.5e-78
Identities = 158/335 (47%), Positives = 229/335 (68%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + + +GINFD Y++I V+ +G++VPPA+ TF E +L E L N+ R YVK TPV
Sbjct: 241 EDNIFRQYQSGINFDKYDEILVDVTGKDVPPAILTFEEANLCETLRRNVARAGYVKLTPV 300
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+H+IPI + GRDLMACAQTGSGKTAAF PI+S +M E + + + P A+I+AP
Sbjct: 301 QKHSIPIIMAGRDLMACAQTGSGKTAAFLLPILSYMMNEG-ITASQYLQLQEPEAIIIAP 359
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI+++A+KFSY T V+ VV YGG +R++E+G +IL ATPGRL+D++ +
Sbjct: 360 TRELINQIYLDARKFSYGTCVRPVVVYGGIQPVHAMRDVEKGCNILCATPGRLLDIVSKE 419
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L +RYL LDEADRMLDMGF P+I K++ + MP RQT++FSAT+P+EI+RLAS
Sbjct: 420 KIGLSKLRYLVLDEADRMLDMGFAPEIEKLMTKPGMPTKEKRQTLMFSATYPEEIRRLAS 479
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
++L + ++F+ VG VG + + Q V + E+ K L+++L + ++ T++F
Sbjct: 480 NYLKSEHLFVVVGLVGGACSDVAQTVLEMRENGKMEKLLEILKSS-------EKERTMIF 532
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQ-QRTS 444
V TKK AD + +L F +T+IHGDR Q QR S
Sbjct: 533 VNTKKKADFIAGYLCQEKFSSTSIHGDREQYQRES 567
Score = 38 (18.4 bits), Expect = 9.5e-78, Sum P(2) = 9.5e-78
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 27 RPTRSTYVPPHLRNKPPTSSE 47
+P + TY+PP PP E
Sbjct: 226 KPKKVTYIPP-----PPPDGE 241
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 167/331 (50%), Positives = 220/331 (66%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + GINFD Y+DI V+ SG N+P A+ TF E L E+L NI R YVKPTPV
Sbjct: 148 EDSIFSHYKMGINFDKYDDILVDVSGTNLPAAIMTFEEAKLCESLENNISRSGYVKPTPV 207
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q++ +PI GRDLMACAQTGSGKTAAF PI+ +M + V R S P A+I+AP
Sbjct: 208 QKYGLPIISAGRDLMACAQTGSGKTAAFLLPILQQLMADG-VAASRFSEIQEPEAVIVAP 266
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI+ EA+KFS+ T V+ VV YGG Q+RE+E+G ++L TPGRL+D++ R
Sbjct: 267 TRELINQIYQEARKFSFGTCVRPVVVYGGVNTGYQMREIEKGCNVLCGTPGRLLDMIGRG 326
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
+V L +R+L LDEADRMLDMGFEP +R++V MP RQT++FSATFP++IQRLA+
Sbjct: 327 KVGLSKVRHLVLDEADRMLDMGFEPDMRRLVGSPGMPSKEERQTLMFSATFPEDIQRLAA 386
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
DFL +Y+F+AVG VG + + Q V + +KR L+DLL G + T+VF
Sbjct: 387 DFLKVDYLFVAVGVVGGACTDVEQTFLQVTKFNKREQLLDLLRTI------GSER-TMVF 439
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
VETK+ AD + +L P T+IHGDR Q+
Sbjct: 440 VETKRQADFIAAFLCQEKVPTTSIHGDREQR 470
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 158/331 (47%), Positives = 223/331 (67%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 229 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 288
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +MR+ + R P +I+AP
Sbjct: 289 QKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAP 347
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG +R++ +G +IL ATPGRL+D++ +
Sbjct: 348 TRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKE 407
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ ++YL LDEADRMLDMGF P+++K++ MP RQT+LFSATFP+EIQRLA
Sbjct: 408 KIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAG 467
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q + V + KR L+++L + ++ T+VF
Sbjct: 468 EFLKSNYLFVAVGQVGGACRDVQQSILQVGQYSKREKLVEILR-----NIGDER--TMVF 520
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
VETKK AD + +L T+IHGDR Q+
Sbjct: 521 VETKKKADFIATFLCQEKISTTSIHGDREQR 551
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 158/331 (47%), Positives = 224/331 (67%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 257 EDSIFAHYQTGINFDKYDTILVEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 316
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI GGRDLMACAQTGSGKTAAF PI++ +MR+ + R P +I+AP
Sbjct: 317 QKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAP 375
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 376 TRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKE 435
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ ++YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA
Sbjct: 436 KIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAG 495
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q + V + KR L+++L + ++ T+VF
Sbjct: 496 EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILR-----NIGDER--TMVF 548
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
VETKK AD + +L T+IHGDR Q+
Sbjct: 549 VETKKKADFIATFLCQEKISTTSIHGDREQR 579
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 158/331 (47%), Positives = 224/331 (67%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 257 EDSIFAHYQTGINFDKYDTILVEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 316
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI GGRDLMACAQTGSGKTAAF PI++ +MR+ + R P +I+AP
Sbjct: 317 QKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAP 375
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 376 TRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKE 435
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ ++YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA
Sbjct: 436 KIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAG 495
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q + V + KR L+++L + ++ T+VF
Sbjct: 496 EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILR-----NIGDER--TMVF 548
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
VETKK AD + +L T+IHGDR Q+
Sbjct: 549 VETKKKADFIATFLCQEKISTTSIHGDREQR 579
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 158/331 (47%), Positives = 224/331 (67%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 235 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 294
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +M + + R P +I+AP
Sbjct: 295 QKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIVAP 353
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 354 TRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKE 413
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ I+YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA+
Sbjct: 414 KIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAA 473
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q V V + KR L+++L + ++ T+VF
Sbjct: 474 EFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILR-----NIGDER--TMVF 526
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
VETKK AD + +L T+IHGDR Q+
Sbjct: 527 VETKKKADFIATFLCQEKISTTSIHGDREQR 557
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 158/331 (47%), Positives = 224/331 (67%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 255 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 314
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +M + + R P +I+AP
Sbjct: 315 QKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIVAP 373
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 374 TRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKE 433
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ I+YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA+
Sbjct: 434 KIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAA 493
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q V V + KR L+++L + ++ T+VF
Sbjct: 494 EFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILR-----NIGDER--TMVF 546
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
VETKK AD + +L T+IHGDR Q+
Sbjct: 547 VETKKKADFIATFLCQEKISTTSIHGDREQR 577
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 158/331 (47%), Positives = 223/331 (67%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 228 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 287
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +MR+ + R P +I+AP
Sbjct: 288 QKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAP 346
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG +R++ +G +IL ATPGRL+D++ +
Sbjct: 347 TRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSVRQIVQGCNILCATPGRLMDIIGKE 406
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ ++YL LDEADRMLDMGF P+++K++ MP RQT+LFSATFP+EIQRLA
Sbjct: 407 KIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAG 466
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
DFL ++Y+F+AVG+VG + + Q + V + KR L+++L + ++ T+VF
Sbjct: 467 DFLKSSYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILR-----NIGDER--TMVF 519
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
VETKK AD + +L T+IHGDR Q+
Sbjct: 520 VETKKKADFIATFLCQEKISTTSIHGDREQR 550
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 157/331 (47%), Positives = 223/331 (67%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 256 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 315
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +M + + R P +I+AP
Sbjct: 316 QKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIVAP 374
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 375 TRELINQIYLEARKFSFGTCVRAVVIYGGTQLGYSIRQIVQGCNILCATPGRLMDIIGKE 434
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ ++YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA
Sbjct: 435 KIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAG 494
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q + V + KR L+++L + G + T+VF
Sbjct: 495 EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRSI------GDER-TMVF 547
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
VETKK AD + +L T+IHGDR Q+
Sbjct: 548 VETKKKADFIATFLCQEKISTTSIHGDREQR 578
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 157/331 (47%), Positives = 223/331 (67%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 253 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 312
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +M + + R P +I+AP
Sbjct: 313 QKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIVAP 371
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 372 TRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKE 431
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ I+YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA+
Sbjct: 432 KIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAA 491
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q V + KR L+++L + ++ T+VF
Sbjct: 492 EFLKSNYLFVAVGQVGGACRDVQQADLQVGQYSKREKLLEILR-----NIGDER--TMVF 544
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
VETKK AD + +L T+IHGDR Q+
Sbjct: 545 VETKKKADFIATFLCQEKISTTSIHGDREQR 575
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 156/331 (47%), Positives = 223/331 (67%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGI+FD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 256 EDSIFAHYQTGISFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 315
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +M + + P +I+AP
Sbjct: 316 QKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASCFKELQEPECIIVAP 374
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 375 TRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKE 434
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ I+YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA+
Sbjct: 435 KIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAA 494
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q V V + KR L+++L + ++ T+VF
Sbjct: 495 EFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILR-----NIGDER--TMVF 547
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
VETKK AD + +L T+IHGDR Q+
Sbjct: 548 VETKKKADFIATFLCQEKISTTSIHGDREQR 578
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 156/331 (47%), Positives = 221/331 (66%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 240 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 299
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +MR+ + R P +I+AP
Sbjct: 300 QKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAP 358
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG +R++ +G +IL ATPGRL+D++ +
Sbjct: 359 TRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKE 418
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ ++YL LDEADRMLDMGF P+++K++ MP RQT+LFSATFP+EIQRLA
Sbjct: 419 KIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAG 478
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q + V K+ L+++L + ++ + VF
Sbjct: 479 EFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEILR-----NIGDERPM--VF 531
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
VETKK AD + +L T+IHGDR Q+
Sbjct: 532 VETKKKADFIATFLCQEKISTTSIHGDREQR 562
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 156/331 (47%), Positives = 221/331 (66%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 240 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 299
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +MR+ + R P +I+AP
Sbjct: 300 QKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAP 358
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG +R++ +G +IL ATPGRL+D++ +
Sbjct: 359 TRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKE 418
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ ++YL LDEADRMLDMGF P+++K++ MP RQT+LFSATFP+EIQRLA
Sbjct: 419 KIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAG 478
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q + V K+ L+++L + ++ + VF
Sbjct: 479 EFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEILR-----NIGDERPM--VF 531
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
VETKK AD + +L T+IHGDR Q+
Sbjct: 532 VETKKKADFIATFLCQEKISTTSIHGDREQR 562
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 156/331 (47%), Positives = 220/331 (66%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + + TGINFD Y+DI VE SG +VPPA+ TF E +L ++L N+ + YVK TP+
Sbjct: 253 ESDIFKHYQTGINFDKYDDIVVEVSGSDVPPAILTFEEANLCDSLAKNVCKSGYVKLTPI 312
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+H+IPI + GRDLMACAQTGSGKTAAF PI++ +M + V+ P A+I+AP
Sbjct: 313 QKHSIPIIVAGRDLMACAQTGSGKTAAFLLPILAHLMVKG-VESSAFQTLKEPEAIIVAP 371
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI+++A+KFSY T V+ VV YGG + L+++ G +IL ATPGRL+D++ +
Sbjct: 372 TRELINQIYLDARKFSYGTCVRPVVIYGGTQMFHSLKQISEGCNILCATPGRLLDVIRKE 431
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L +RYL LDEADRMLDMGF I +++ MP RQT++FSATFP IQ LA
Sbjct: 432 KIGLTKLRYLVLDEADRMLDMGFREDIENLLKSSGMPSKEERQTLMFSATFPSSIQSLAR 491
Query: 352 DFLA-NYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+ L +Y+F+ VG+VG + + Q V V E K+ LM++L ++ G + T+VF
Sbjct: 492 EILKPDYLFVVVGQVGGACSDVEQMVIEVDEFGKKDKLMEILQ-EI-----GSER-TMVF 544
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
V+TKK AD + +L P+T+IHGDR Q+
Sbjct: 545 VKTKKKADFIATFLCQEKVPSTSIHGDREQK 575
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 151/338 (44%), Positives = 218/338 (64%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + +GINFD Y++ VE SG + P + F E + + L NI + Y K TPV
Sbjct: 134 EQSIFACYQSGINFDKYDECAVEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPV 193
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+H+IP+ GRDLM+CAQTGSGKTAAF PI+ +M++ V + P +I+AP
Sbjct: 194 QKHSIPVIQAGRDLMSCAQTGSGKTAAFLLPIVDRMMKDG-VTASAFQKQQEPQCIIVAP 252
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI +EA+KF Y T ++ VV YGG +R++ +G +IL ATPGRL+D++E+
Sbjct: 253 TRELINQIFLEARKFVYGTCIRPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKG 312
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++SL ++YL LDEADRMLDMGF ++K++ +MP RQT++FSATFP+E+QRLA
Sbjct: 313 KISLVEVKYLVLDEADRMLDMGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAG 372
Query: 352 DFL-ANYIFLAVGRV-GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLV 409
+FL +YIFL +G G+ +D + Q + V KR L+++L + G G++ T+V
Sbjct: 373 EFLKTDYIFLVIGNTCGACSD-VQQNILQVPRLSKRDKLIEILQS---TG--GER--TMV 424
Query: 410 FVETKKGADALEHWLYMNGFPATTIHGDRTQQRTSIEI 447
FV+TKK AD L +L P+T+IHGDR Q+ I +
Sbjct: 425 FVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIAL 462
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 151/338 (44%), Positives = 218/338 (64%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + +GINFD Y++ VE SG + P + F E + + L NI + Y K TPV
Sbjct: 134 EQSIFACYQSGINFDKYDECAVEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPV 193
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+H+IP+ GRDLM+CAQTGSGKTAAF PI+ +M++ V + P +I+AP
Sbjct: 194 QKHSIPVIQAGRDLMSCAQTGSGKTAAFLLPIVDRMMKDG-VTASAFQKQQEPQCIIVAP 252
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI +EA+KF Y T ++ VV YGG +R++ +G +IL ATPGRL+D++E+
Sbjct: 253 TRELINQIFLEARKFVYGTCIRPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKG 312
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++SL ++YL LDEADRMLDMGF ++K++ +MP RQT++FSATFP+E+QRLA
Sbjct: 313 KISLVEVKYLVLDEADRMLDMGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAG 372
Query: 352 DFL-ANYIFLAVGRV-GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLV 409
+FL +YIFL +G G+ +D + Q + V KR L+++L + G G++ T+V
Sbjct: 373 EFLKTDYIFLVIGNTCGACSD-VQQNILQVPRLSKRDKLIEILQS---TG--GER--TMV 424
Query: 410 FVETKKGADALEHWLYMNGFPATTIHGDRTQQRTSIEI 447
FV+TKK AD L +L P+T+IHGDR Q+ I +
Sbjct: 425 FVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIAL 462
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 156/333 (46%), Positives = 214/333 (64%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E+ TGINFD Y+ I VE SG + PPA+ TF E DL + LN +I + Y K TPV
Sbjct: 233 EEATFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEETDLCQTLNNDITKAGYTKLTPV 292
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q++ IPI + GRDLMACAQTGSGKTAAF PI++ +MR+ V R P +I+AP
Sbjct: 293 QKYGIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-VTASRFKDQQEPECIIVAP 351
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI +EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 352 TRELINQIFLEARKFSFGTCVRPVVIYGGTQLGHSIRQIMQGCNILCATPGRLMDIIGKE 411
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK-EIQRLA 350
++ L IRYL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+ + A
Sbjct: 412 KIGLGQIRYLVLDEADRMLDMGFGPEMKKLISFPGMPSKEQRQTLMFSATFPRGNFKDWA 471
Query: 351 SDFLANYIF--LAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTL 408
+FL N +AVG+VG + + Q V V + KR L+++L N G++ T+
Sbjct: 472 GEFLKNLTICLVAVGQVGGACSDVQQTVLQVGQYSKREKLVEILR----N--IGEER-TM 524
Query: 409 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
VFVETKK AD + +L T+IHGDR Q+
Sbjct: 525 VFVETKKKADFIATFLCQEKISTTSIHGDREQR 557
>UNIPROTKB|D6RCM4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HGNC:HGNC:18700 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RCM4 SMR:D6RCM4 Ensembl:ENST00000506511
ArrayExpress:D6RCM4 Bgee:D6RCM4 Uniprot:D6RCM4
Length = 518
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 140/282 (49%), Positives = 198/282 (70%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 235 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 294
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +M + + R P +I+AP
Sbjct: 295 QKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIVAP 353
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 354 TRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKE 413
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ I+YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA+
Sbjct: 414 KIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAA 473
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLL 392
+FL +NY+F+AVG+VG + + Q V V + KR L+++L
Sbjct: 474 EFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEIL 515
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 133/306 (43%), Positives = 190/306 (62%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G +VP V TF E + + ++ + KPT +Q P+++ GRD++ A+TGSGKT
Sbjct: 132 GRDVPRPVETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKT 191
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVV 256
++C P I I + + G P+ LILAPTREL+ QI E KF + ++
Sbjct: 192 LSYCLPAIVHINAQPLLAPGDG-----PIVLILAPTRELAVQIQAEISKFGKSSRIRNTC 246
Query: 257 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 316
YGG P Q+R+L RGV++ +ATPGRL+D+LE R +L+ + YL LDEADRMLDMGFEP
Sbjct: 247 VYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEP 306
Query: 317 QIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDLIVQR 375
QIRKI+ Q+ P RQT ++SAT+PKE+++LASDFL NYI + +G + S+ I Q
Sbjct: 307 QIRKIISQI-RPD---RQTCMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQI 362
Query: 376 VEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIH 435
VE + E +KR ++ L + N G + L VF TK+ AD + +L +G+PA +IH
Sbjct: 363 VEVISEFEKRDRMIKHLEKIMEN--RGNKCL--VFTGTKRIADEITRFLRQDGWPALSIH 418
Query: 436 GDRTQQ 441
GD+ QQ
Sbjct: 419 GDKQQQ 424
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 587 (211.7 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 126/277 (45%), Positives = 180/277 (64%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 193 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 247
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ L+LAPTREL+ Q+ A + + +K YGGAP Q+R+LERGV+I +ATPGRL
Sbjct: 248 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 307
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PK
Sbjct: 308 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPK 363
Query: 345 EIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
E+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A K
Sbjct: 364 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----K 419
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ T++FVETK+ D L + +G+PA IHGD++Q
Sbjct: 420 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQ 456
Score = 40 (19.1 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 50 ASSRESTEPASGP 62
AS RES PA+ P
Sbjct: 34 ASERESAAPAAAP 46
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 587 (211.7 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 126/277 (45%), Positives = 180/277 (64%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 191 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 245
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ L+LAPTREL+ Q+ A + + +K YGGAP Q+R+LERGV+I +ATPGRL
Sbjct: 246 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 305
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PK
Sbjct: 306 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPK 361
Query: 345 EIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
E+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A K
Sbjct: 362 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----K 417
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ T++FVETK+ D L + +G+PA IHGD++Q
Sbjct: 418 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQ 454
Score = 40 (19.1 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 50 ASSRESTEPASGP 62
AS RES PA+ P
Sbjct: 32 ASERESAAPAAAP 44
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 587 (211.7 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 126/277 (45%), Positives = 180/277 (64%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 191 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 245
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ L+LAPTREL+ Q+ A + + +K YGGAP Q+R+LERGV+I +ATPGRL
Sbjct: 246 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 305
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PK
Sbjct: 306 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPK 361
Query: 345 EIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
E+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A K
Sbjct: 362 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----K 417
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ T++FVETK+ D L + +G+PA IHGD++Q
Sbjct: 418 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQ 454
Score = 40 (19.1 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 50 ASSRESTEPASGP 62
AS RES PA+ P
Sbjct: 32 ASERESAAPAAAP 44
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 587 (211.7 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 126/277 (45%), Positives = 180/277 (64%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 193 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 247
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ L+LAPTREL+ Q+ A + + +K YGGAP Q+R+LERGV+I +ATPGRL
Sbjct: 248 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 307
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PK
Sbjct: 308 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPK 363
Query: 345 EIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
E+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A K
Sbjct: 364 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----K 419
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ T++FVETK+ D L + +G+PA IHGD++Q
Sbjct: 420 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQ 456
Score = 40 (19.1 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 50 ASSRESTEPASGP 62
AS RES PA+ P
Sbjct: 34 ASERESAAPAAAP 46
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 539 (194.8 bits), Expect = 8.4e-59, Sum P(3) = 8.4e-59
Identities = 121/275 (44%), Positives = 171/275 (62%)
Query: 168 PTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLAL 227
P+P+Q + PI++ RD++A A+TGSGKT + P G M ++QR + P L
Sbjct: 252 PSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIP---GFM---HLQRIHNDSRMGPTIL 305
Query: 228 ILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDL 287
+L+PTREL++QI VEA KF + + YGGAP QL+E+ERGVDI+VATPGRL D+
Sbjct: 306 VLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDI 365
Query: 288 LERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQ 347
LE R+SL + YL LDEADRMLDMGFEPQIRKIV ++ P RQT++++AT+PKE++
Sbjct: 366 LEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEV----PTKRQTLMYTATWPKEVR 421
Query: 348 RLASDFLANYIFLAVGRVGS--STDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQA 405
++A+D L N + +G V + I Q +E + +K S L +L +Q G +
Sbjct: 422 KIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEP----GSKI 477
Query: 406 LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ +F TK+ D L L F A IHGD++Q
Sbjct: 478 I--IFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQ 509
Score = 52 (23.4 bits), Expect = 8.4e-59, Sum P(3) = 8.4e-59
Identities = 20/83 (24%), Positives = 35/83 (42%)
Query: 111 AEQPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPT 169
A P + ++ +AY + SG VPP + +F L L +R C P
Sbjct: 126 ARGPPSSAAGNELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNEL---LRECPNFMPY 182
Query: 170 PVQRHAIP---ISIGGRDLMACA 189
+ +P ++GG +++ CA
Sbjct: 183 ALS--FVPGAIFALGGANVVRCA 203
Score = 42 (19.8 bits), Expect = 8.4e-59, Sum P(3) = 8.4e-59
Identities = 13/46 (28%), Positives = 17/46 (36%)
Query: 26 PRPTRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWGSGSRPD 71
P + Y P + PP + P SS T S + SG D
Sbjct: 37 PETNVTQYERP-ASSAPPKLAAIPVSSSVQTNQQSSSGFNSGKEDD 81
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 138/311 (44%), Positives = 194/311 (62%)
Query: 133 VETSGENVP-PAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQT 191
+ G+ VP P++ F E + + IR+ + KPT +Q PI++ GRDL+ AQT
Sbjct: 145 ITIKGDQVPTPSIE-FEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQT 203
Query: 192 GSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTG 251
GSGKT A+ P + I + ++R G P+AL+LAPTREL+ QI A +F T
Sbjct: 204 GSGKTLAYVLPAVVHINNQPRLERGDG-----PIALVLAPTRELAQQIQQVAIEFGSNTH 258
Query: 252 VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLD 311
V+ +GGAP QQ R+LERGV+I++ATPGRL+D LER SL+ YL LDEADRMLD
Sbjct: 259 VRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLD 318
Query: 312 MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTD 370
MGFEPQIRKI+QQ+ P RQ +++SAT+PKE+++LA +FL NYI + +G + S+
Sbjct: 319 MGFEPQIRKIMQQI-RPD---RQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANH 374
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
I+Q V+ E++K L+ LL A + T++FVETKK D + + G+
Sbjct: 375 NILQIVDVCDENEKLMKLIKLLTDISAEN----ETKTIIFVETKKRVDEITRNISRQGWR 430
Query: 431 ATTIHGDRTQQ 441
A IHGD++QQ
Sbjct: 431 ACAIHGDKSQQ 441
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 135/312 (43%), Positives = 195/312 (62%)
Query: 130 DIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACA 189
DI VE G +VP + F + + + + I + + +PTP+Q P+++ GRDL+ A
Sbjct: 152 DISVE--GRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIA 209
Query: 190 QTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQ 249
+TGSGKT A+ P + + + PR + P+ LILAPTREL+ QI E++KF +
Sbjct: 210 ETGSGKTLAYLLPALVHVSAQ-----PRLGQDDGPIVLILAPTRELAVQIQEESRKFGLR 264
Query: 250 TGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRM 309
+GV+ YGGAP Q+R+L RGV+I++ATPGRL+D+LE +L+ + YL LDEADRM
Sbjct: 265 SGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRM 324
Query: 310 LDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SS 368
LDMGFEPQIRKIV Q+ P RQT+L+SAT+P+E++ LA FL + +G +
Sbjct: 325 LDMGFEPQIRKIVSQI-RPD---RQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKA 380
Query: 369 TDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNG 428
I Q +E V +K + L+ LL Q+ +G + L+FVETK+G D + L M+G
Sbjct: 381 NQSINQVIEIVPTPEKYNRLLTLLK-QLMDG-----SKILIFVETKRGCDQVTRQLRMDG 434
Query: 429 FPATTIHGDRTQ 440
+PA IHGD+TQ
Sbjct: 435 WPALAIHGDKTQ 446
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 130/310 (41%), Positives = 192/310 (61%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
V G N P + F E + + I+R + +PT +Q P+++ G D++ AQTG
Sbjct: 70 VTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 129
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++S +
Sbjct: 130 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYSRACRL 184
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 185 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDM 244
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL Y+ + +G + S+
Sbjct: 245 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHN 300
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 301 ILQIVDVCHDVEKDDKLIRLMEEIMSE----KENKTIVFVETKRRCDDLTRKMRRDGWPA 356
Query: 432 TTIHGDRTQQ 441
IHGD++QQ
Sbjct: 357 MGIHGDKSQQ 366
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 130/310 (41%), Positives = 192/310 (61%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
V G N P + F E + + I+R + +PT +Q P+++ G D++ AQTG
Sbjct: 78 VTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 137
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++S +
Sbjct: 138 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYSRACRL 192
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 193 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDM 252
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL Y+ + +G + S+
Sbjct: 253 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHN 308
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 309 ILQIVDVCHDVEKDDKLIRLMEEIMSE----KENKTIVFVETKRRCDDLTRKMRRDGWPA 364
Query: 432 TTIHGDRTQQ 441
IHGD++QQ
Sbjct: 365 MGIHGDKSQQ 374
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 135/346 (39%), Positives = 200/346 (57%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEA 155
D + + PF D E + + ++ + G NVP V TF E
Sbjct: 73 DWKNETLIPFQKDFYKEHENVRNRSDAEVTEYRKEKEIVVHGLNVPKPVTTFEEAGFPNY 132
Query: 156 LNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQR 215
+ +++ + PTP+Q+ A P+++ GRD++ + TGSGKT ++C P I I + +
Sbjct: 133 VLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLSP 192
Query: 216 PRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVD 275
G P+ L+LAPTREL+ QI E KF + ++ YGG P Q+R+L RGV+
Sbjct: 193 GDG-----PIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVE 247
Query: 276 ILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQT 335
I +ATPGRL+D+L+ + +L+ + YL LDEADRMLDMGFEPQIRKIV Q+ P RQT
Sbjct: 248 ICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQT 303
Query: 336 MLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHA 394
++FSAT+PKE+QRLA D+L +YI + VG + +++ I Q VE V +DKR+ L
Sbjct: 304 VMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARL----GK 359
Query: 395 QVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ + + L+F TK+ AD + +L +G+PA IHGD+ Q
Sbjct: 360 DIEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQ 405
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 128/305 (41%), Positives = 190/305 (62%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G +VP V TF E + ++ + PT +Q P+++ GRD++ A+TGSGKT
Sbjct: 117 GSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKT 176
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVV 256
+C P I I + + G P+ LILAPTREL+ QI E KF + ++
Sbjct: 177 LTYCLPAIVHINAQPLLAPGDG-----PIVLILAPTRELAVQIQAEISKFGKSSRIRNTC 231
Query: 257 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 316
YGG P Q+R+L RGV++ +ATPGRL+D+LE + +L+ + YL LDEADRMLDMGFEP
Sbjct: 232 VYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEP 291
Query: 317 QIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDLIVQR 375
QIRKI+ Q+ P RQT+++SAT+PKE++ +A+DFL ++I + +G + S+ I Q
Sbjct: 292 QIRKIIGQI-RPD---RQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQI 347
Query: 376 VEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIH 435
VE V ES+KR ++ + +V +G K + L+FV TK+ AD + +L +G+PA +IH
Sbjct: 348 VEVVSESEKRDRMIRHME-KVMDGKDSKNKI-LIFVGTKRVADEITRFLRQDGWPALSIH 405
Query: 436 GDRTQ 440
GD+ Q
Sbjct: 406 GDKQQ 410
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 135/333 (40%), Positives = 200/333 (60%)
Query: 111 AEQP-VAEEENTGIN-FDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKP 168
+E P VA + I F ++ V+ G ++P + TF E + + ++ + KP
Sbjct: 93 SEHPDVAARSDRDIEQFRKENEMTVK--GHDIPHPITTFDEAGFPDYVLQEVKDQGFPKP 150
Query: 169 TPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALI 228
TP+Q P+++ GRD++ A TGSGKT ++C P I I + +Q G P+ L+
Sbjct: 151 TPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGDG-----PIVLV 205
Query: 229 LAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL 288
LAPTREL+ QI E KF + ++ YGGAP Q+R+L RGV+I +ATPGRL+D+L
Sbjct: 206 LAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDML 265
Query: 289 ERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQR 348
E + +L+ + YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PKE+Q+
Sbjct: 266 EAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVQQ 321
Query: 349 LASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALT 407
L D+L + I + +G + +++ I Q VE + E KR L+ H + A ++ K
Sbjct: 322 LTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVK--HLESA--LNEKDNKI 377
Query: 408 LVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
LVF TK+ D + +L +G+PA IHGD+ Q
Sbjct: 378 LVFASTKRTCDEITTYLRSDGWPALAIHGDKEQ 410
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 128/309 (41%), Positives = 191/309 (61%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G P V F + + + + + + +PT +Q P+++ GRD++ AQTG
Sbjct: 83 ITVRGSGCPKPVTNFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTG 142
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT A+ P I I + Y++R G P+ L+LAPTREL+ Q+ A + + +
Sbjct: 143 SGKTLAYLLPAIVHINHQPYLERGDG-----PICLVLAPTRELAQQVQQVAFDYGKSSRI 197
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 198 KSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDM 257
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +Y+ + +G + S+
Sbjct: 258 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHN 313
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ E++K + L+ L+ +A K+ T++FVETKK D L + +G+PA
Sbjct: 314 ILQIVDVCMENEKDNKLIQLMEEIMAE----KENKTIIFVETKKRCDELTRRMRRDGWPA 369
Query: 432 TTIHGDRTQ 440
IHGD++Q
Sbjct: 370 MCIHGDKSQ 378
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 130/304 (42%), Positives = 189/304 (62%)
Query: 138 ENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTA 197
E P V F + + + + + +PTP+Q P+++ GRD++ AQTGSGKT
Sbjct: 83 EGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTL 142
Query: 198 AFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVA 257
A+ P I I + Y++R G P+ L+LAPTREL+ Q+ A + + +K
Sbjct: 143 AYLLPAIVHINHQPYLERGDG-----PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCI 197
Query: 258 YGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQ 317
YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDMGFEPQ
Sbjct: 198 YGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQ 257
Query: 318 IRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDLIVQRV 376
IRKIV Q+ P RQT+++SAT+PKE+++LA DFL +Y+ + VG + S+ I+Q V
Sbjct: 258 IRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIV 313
Query: 377 EFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHG 436
+ ES+K L+ L+ +A K+ T++FVETK+ D L + +G+PA IHG
Sbjct: 314 DVCMESEKDHKLIQLMEEIMAE----KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHG 369
Query: 437 DRTQ 440
D++Q
Sbjct: 370 DKSQ 373
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 133/323 (41%), Positives = 194/323 (60%)
Query: 121 TGINFDAYE-DIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPIS 179
T D Y + G N P V F E + + I R + +PT +Q P++
Sbjct: 69 TAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 180 IGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQI 239
+ G D++ AQTGSGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQV 183
Query: 240 HVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIR 299
A ++ +K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+
Sbjct: 184 QQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTT 243
Query: 300 YLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIF 359
YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI
Sbjct: 244 YLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIH 299
Query: 360 LAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGAD 418
+ +G + S+ I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D
Sbjct: 300 INIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCD 355
Query: 419 ALEHWLYMNGFPATTIHGDRTQQ 441
L + +G+PA IHGD++QQ
Sbjct: 356 ELTRKMRRDGWPAMGIHGDKSQQ 378
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 133/323 (41%), Positives = 194/323 (60%)
Query: 121 TGINFDAYE-DIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPIS 179
T D Y + G N P V F E + + I R + +PT +Q P++
Sbjct: 69 TAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 180 IGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQI 239
+ G D++ AQTGSGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQV 183
Query: 240 HVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIR 299
A ++ +K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+
Sbjct: 184 QQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTT 243
Query: 300 YLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIF 359
YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI
Sbjct: 244 YLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIH 299
Query: 360 LAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGAD 418
+ +G + S+ I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D
Sbjct: 300 INIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCD 355
Query: 419 ALEHWLYMNGFPATTIHGDRTQQ 441
L + +G+PA IHGD++QQ
Sbjct: 356 ELTRKMRRDGWPAMGIHGDKSQQ 378
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 130/310 (41%), Positives = 191/310 (61%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G N P V F E + + I R + +PT +Q P+++ G D++ AQTG
Sbjct: 82 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 141
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++ +
Sbjct: 142 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYCRACRL 196
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 197 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDM 256
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI + +G + S+
Sbjct: 257 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHN 312
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 313 ILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCDELTRKMRRDGWPA 368
Query: 432 TTIHGDRTQQ 441
IHGD++QQ
Sbjct: 369 MGIHGDKSQQ 378
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 130/310 (41%), Positives = 191/310 (61%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G N P V F E + + I R + +PT +Q P+++ G D++ AQTG
Sbjct: 139 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 198
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++ +
Sbjct: 199 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYCRACRL 253
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 254 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDM 313
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI + +G + S+
Sbjct: 314 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHN 369
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 370 ILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCDELTRKMRRDGWPA 425
Query: 432 TTIHGDRTQQ 441
IHGD++QQ
Sbjct: 426 MGIHGDKSQQ 435
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 130/310 (41%), Positives = 191/310 (61%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G N P V F E + + I R + +PT +Q P+++ G D++ AQTG
Sbjct: 82 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 141
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++ +
Sbjct: 142 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYCRACRL 196
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 197 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDM 256
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI + +G + S+
Sbjct: 257 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHN 312
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 313 ILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCDELTRKMRRDGWPA 368
Query: 432 TTIHGDRTQQ 441
IHGD++QQ
Sbjct: 369 MGIHGDKSQQ 378
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 130/310 (41%), Positives = 191/310 (61%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G N P V F E + + I R + +PT +Q P+++ G D++ AQTG
Sbjct: 82 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 141
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++ +
Sbjct: 142 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYCRACRL 196
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 197 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDM 256
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI + +G + S+
Sbjct: 257 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHN 312
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 313 ILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCDELTRKMRRDGWPA 368
Query: 432 TTIHGDRTQQ 441
IHGD++QQ
Sbjct: 369 MGIHGDKSQQ 378
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 130/310 (41%), Positives = 191/310 (61%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G N P V F E + + I R + +PT +Q P+++ G D++ AQTG
Sbjct: 82 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 141
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++ +
Sbjct: 142 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYCRACRL 196
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 197 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDM 256
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI + +G + S+
Sbjct: 257 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHN 312
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 313 ILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCDELTRKMRRDGWPA 368
Query: 432 TTIHGDRTQQ 441
IHGD++QQ
Sbjct: 369 MGIHGDKSQQ 378
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 130/310 (41%), Positives = 191/310 (61%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G N P V F E + + I R + +PT +Q P+++ G D++ AQTG
Sbjct: 82 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 141
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++ +
Sbjct: 142 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYCRACRL 196
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 197 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDM 256
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI + +G + S+
Sbjct: 257 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHN 312
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 313 ILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCDELTRKMRRDGWPA 368
Query: 432 TTIHGDRTQQ 441
IHGD++QQ
Sbjct: 369 MGIHGDKSQQ 378
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 130/342 (38%), Positives = 208/342 (60%)
Query: 102 VNPFGDDVGAEQP-VAEEENTGIN-FDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLN 159
+ PF + E P VA +T + + +I VE G+++P V +F ++ + +
Sbjct: 56 LTPFEKNFYVESPAVAAMTDTEVEEYRKLREITVE--GKDIPKPVKSFRDVGFPDYVLEE 113
Query: 160 IRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGS 219
+++ + +PTP+Q P+++ GRDL+ A+TGSGKT ++ P I + + + G
Sbjct: 114 VKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDG- 172
Query: 220 RTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 279
P+ L+LAPTREL+ QI EA KF + +K YGG P Q+R+L++GV+I++A
Sbjct: 173 ----PIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIA 228
Query: 280 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFS 339
TPGRL+D++E +L+ + YL LDEADRMLDMGF+PQIRKIV + P RQT+ +S
Sbjct: 229 TPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHI-RPD---RQTLYWS 284
Query: 340 ATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQR-VEFVHESDKRSHLMDLLHAQVAN 398
AT+PKE+++L+ FL N + +G + +++ V+ + ES K + L+ LL + +
Sbjct: 285 ATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLE-DIMD 343
Query: 399 GVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
G + LVF++TKKG D + L M+G+PA +IHGD++Q
Sbjct: 344 G-----SRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQ 380
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 571 (206.1 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 126/305 (41%), Positives = 184/305 (60%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G VPP + F + L I + PTP+Q A PI++ GRD++ A+TGSGKT
Sbjct: 376 GREVPPPIMQFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKT 435
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVV 256
AF P I I + ++ G P+ L+LAPTREL+ QI E KF + +
Sbjct: 436 LAFLLPSIVHINAQPVLREDDG-----PIVLVLAPTRELALQIQEETNKFGGTSQISNTC 490
Query: 257 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 316
YGGA + Q+ L++GV+I++ATPGRL+D+LE + +L+ + YL LDEADRMLDMGFEP
Sbjct: 491 VYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEP 550
Query: 317 QIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQR- 375
QIRKI+ Q+ P RQT++FSAT+PKE+Q LA DFL ++I + +G + + V++
Sbjct: 551 QIRKIISQI-RPD---RQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQI 606
Query: 376 VEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIH 435
VE + +K+ ++ L G G+ +VF ET+KG D L+ L +GF + IH
Sbjct: 607 VEVCQDFEKKERMLSFL------GSVGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIH 660
Query: 436 GDRTQ 440
G+++Q
Sbjct: 661 GNKSQ 665
Score = 37 (18.1 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 42 PPTSSEPPASSRESTE---PASGPRWGSGS 68
PPTS+ +SS +T P++ GS S
Sbjct: 206 PPTSTSTSSSSTTTTTTTTPSTSYNGGSTS 235
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 126/277 (45%), Positives = 180/277 (64%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 166
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ L+LAPTREL+ Q+ A + + +K YGGAP Q+R+LERGV+I +ATPGRL
Sbjct: 167 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 226
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PK
Sbjct: 227 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPK 282
Query: 345 EIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
E+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A K
Sbjct: 283 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----K 338
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ T++FVETK+ D L + +G+PA IHGD++Q
Sbjct: 339 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQ 375
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 126/277 (45%), Positives = 180/277 (64%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 166
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ L+LAPTREL+ Q+ A + + +K YGGAP Q+R+LERGV+I +ATPGRL
Sbjct: 167 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 226
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PK
Sbjct: 227 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPK 282
Query: 345 EIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
E+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A K
Sbjct: 283 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----K 338
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ T++FVETK+ D L + +G+PA IHGD++Q
Sbjct: 339 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQ 375
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 126/277 (45%), Positives = 180/277 (64%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 166
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ L+LAPTREL+ Q+ A + + +K YGGAP Q+R+LERGV+I +ATPGRL
Sbjct: 167 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 226
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PK
Sbjct: 227 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPK 282
Query: 345 EIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
E+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A K
Sbjct: 283 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----K 338
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ T++FVETK+ D L + +G+PA IHGD++Q
Sbjct: 339 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQ 375
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 126/277 (45%), Positives = 180/277 (64%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 166
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ L+LAPTREL+ Q+ A + + +K YGGAP Q+R+LERGV+I +ATPGRL
Sbjct: 167 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 226
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PK
Sbjct: 227 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPK 282
Query: 345 EIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
E+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A K
Sbjct: 283 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----K 338
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ T++FVETK+ D L + +G+PA IHGD++Q
Sbjct: 339 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQ 375
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 127/310 (40%), Positives = 191/310 (61%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G + P + F E + + + I + + PTP+Q P+++ G+D++ AQTG
Sbjct: 84 ITVKGRDGPKPIVKFHEANFPKYVMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTG 143
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++ G P+ L+LAPTREL+ Q+ A ++ + +
Sbjct: 144 SGKTLSYLLPAIVHINHQPFLEHGDG-----PICLVLAPTRELAQQVQQVAAEYGKASRI 198
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 199 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDM 258
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL YI + VG + S+
Sbjct: 259 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSANHN 314
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ ++ +K L+ LL ++ K+ T++FVETK+ D L + +G+PA
Sbjct: 315 ILQIVDVCNDGEKEDKLIRLLEEIMSE----KENKTIIFVETKRRCDDLTRRMRRDGWPA 370
Query: 432 TTIHGDRTQQ 441
IHGD+ QQ
Sbjct: 371 MGIHGDKNQQ 380
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 129/310 (41%), Positives = 190/310 (61%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G N P V F E + + I R + +PT +Q P+++ G D++ AQTG
Sbjct: 82 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 141
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++ +
Sbjct: 142 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYCRACRL 196
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+ +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 197 KSTCIYGGAPKGPQIRDLERGVENCIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDM 256
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI + +G + S+
Sbjct: 257 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHN 312
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 313 ILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCDELTRKMRRDGWPA 368
Query: 432 TTIHGDRTQQ 441
IHGD++QQ
Sbjct: 369 MGIHGDKSQQ 378
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 133/309 (43%), Positives = 191/309 (61%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
V G VP V F E L ++ + K+ KPT +Q + PI++ GRD+++ A+TG
Sbjct: 118 VTLEGRGVPRPVFEFNEAPLPGQIH-ELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTG 176
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT AF P + I ++ + QR G P L+L PTREL+ Q+ + F + G+
Sbjct: 177 SGKTLAFMLPALVHITKQAHRQRGEG-----PAVLVLLPTRELAQQVQEVSIDFCHSLGL 231
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K+ +GGA Q R+LERGVDI+VATPGRL+D L+ +++ YL LDEADRMLDM
Sbjct: 232 KMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDM 291
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQI+KI+ Q+ P RQT++FSAT+PKE++ LASDF + FL VG + ++
Sbjct: 292 GFEPQIKKIIGQI-RPD---RQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHN 347
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I Q V+ + E K++ LM+LL+ + N K+ T++FVETK+ AD L + +G+P
Sbjct: 348 ITQVVDILEEHAKQAKLMELLN-HIMNQ---KECKTIIFVETKRKADELTRAMRRDGWPT 403
Query: 432 TTIHGDRTQ 440
IHGD+ Q
Sbjct: 404 LCIHGDKNQ 412
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 126/307 (41%), Positives = 191/307 (62%)
Query: 136 SGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGK 195
SG ++P + TF E + + ++ + KPT +Q P+++ GRD++ A TGSGK
Sbjct: 104 SGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGK 163
Query: 196 TAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVV 255
T ++C P I I + + G P+ L+LAPTREL+ QI E KF + + ++
Sbjct: 164 TLSYCLPGIVHINAQPLLAPGDG-----PIVLVLAPTRELAVQIQTECSKFGHSSRIRNT 218
Query: 256 VAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFE 315
YGG P +QQ+R+L RG +I++ATPGRL+D+LE + +L+ + YL LDEADRMLDMGFE
Sbjct: 219 CVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFE 278
Query: 316 PQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDLIVQ 374
PQIRKIV Q+ P RQT+++SAT+PKE+++LA+D+L + I + VG + S++ I Q
Sbjct: 279 PQIRKIVDQI-RPD---RQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQ 334
Query: 375 RVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTI 434
VE V + +KR D L+ + + TL+F TK+ D + +L +G+PA I
Sbjct: 335 IVEVVSDFEKR----DRLNKYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAI 390
Query: 435 HGDRTQQ 441
HGD+ Q+
Sbjct: 391 HGDKDQR 397
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 134/349 (38%), Positives = 195/349 (55%)
Query: 107 DDVGAEQPVAEEENTGINFDAYEDIPVE-TSGEN---VPPAVNTFAEIDLGEALNLNIRR 162
+DV Q ++E G+ F+ + D V+ TS E + P TFAE +L E + N+
Sbjct: 304 EDVFNMQKISE----GLMFNKFFDAEVKLTSSEKTVGIKPC-KTFAEANLTETMQKNVAH 358
Query: 163 CKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTV 222
Y K TP+Q++A+P+ G D+MACAQTGSGKTAAF PI++ ++ + + G
Sbjct: 359 AGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTA-GEGGC 417
Query: 223 YPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPG 282
YP +IL PTREL+ QI+ E +KF+YQT +++ YGG + ++E+G I+V T G
Sbjct: 418 YPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVG 477
Query: 283 RLVDLLERARVSLQMIRYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGMRQTMLFSAT 341
R+ E + L R+ LDEADRM+D MGF I IV MP RQT++FSAT
Sbjct: 478 RIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSAT 537
Query: 342 FPKEIQRLASDFLA-NYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGV 400
FP +Q A FL NY+ +A+ ++G++ ++Q E S+K+ L++LL + +
Sbjct: 538 FPDSVQEAARAFLRENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYT 597
Query: 401 HGKQA-----LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQRTS 444
K A T+VFV + AD L L PA TIHG R Q+ S
Sbjct: 598 TEKSAEVYTKKTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRERS 646
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 134/349 (38%), Positives = 195/349 (55%)
Query: 107 DDVGAEQPVAEEENTGINFDAYEDIPVE-TSGEN---VPPAVNTFAEIDLGEALNLNIRR 162
+DV Q ++E G+ F+ + D V+ TS E + P TFAE +L E + N+
Sbjct: 304 EDVFNMQKISE----GLMFNKFFDAEVKLTSSEKTVGIKPC-KTFAEANLTETMQKNVAH 358
Query: 163 CKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTV 222
Y K TP+Q++A+P+ G D+MACAQTGSGKTAAF PI++ ++ + + G
Sbjct: 359 AGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTA-GEGGC 417
Query: 223 YPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPG 282
YP +IL PTREL+ QI+ E +KF+YQT +++ YGG + ++E+G I+V T G
Sbjct: 418 YPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVG 477
Query: 283 RLVDLLERARVSLQMIRYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGMRQTMLFSAT 341
R+ E + L R+ LDEADRM+D MGF I IV MP RQT++FSAT
Sbjct: 478 RIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSAT 537
Query: 342 FPKEIQRLASDFLA-NYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGV 400
FP +Q A FL NY+ +A+ ++G++ ++Q E S+K+ L++LL + +
Sbjct: 538 FPDSVQEAARAFLRENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYT 597
Query: 401 HGKQA-----LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQRTS 444
K A T+VFV + AD L L PA TIHG R Q+ S
Sbjct: 598 TEKSAEVYTKKTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRERS 646
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 132/337 (39%), Positives = 198/337 (58%)
Query: 105 FGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCK 164
F +++ + + E+E T D + + + SG +V V TF + + I++
Sbjct: 192 FYEELESISGMTEQETT----DYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQA 247
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
Y KPT +Q A+PI + GRD++ A+TGSGKTAAF P+I IM + +QR G P
Sbjct: 248 YEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEG-----P 302
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ +I APTREL+ QI +EAKKFS G++V YGG ++Q +EL+ G +I+VATPGRL
Sbjct: 303 IGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRL 362
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D+L+ +++ YL LDEADRM D+GFEPQ+R IV Q+ P RQT+LFSAT P
Sbjct: 363 IDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQI-RPD---RQTLLFSATMPW 418
Query: 345 EIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFV-HESDKRSHLMDLLHAQVANGVHGK 403
++++LA + L++ I + VG VG + + I Q V + +++K L++ L + G
Sbjct: 419 KVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGD--- 475
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
LVF K D +E L +N F +HGD+ Q
Sbjct: 476 ---VLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQ 509
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 130/316 (41%), Positives = 188/316 (59%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ SG VPP + +F L + + PTP+Q + PI++ GRD++A A+TG
Sbjct: 146 ITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTG 205
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT + P G + ++QR R + P L+L+PTREL++QI EA KF + +
Sbjct: 206 SGKTLGYLIP---GFL---HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRI 259
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
YGGAP QLR+LERG DI+VATPGRL D+LE R+SL+ I YL LDEADRMLDM
Sbjct: 260 SCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDM 319
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGS--STD 370
GFEPQIRKIV+++ P RQT++++AT+PK ++++A+D L N + +G V +
Sbjct: 320 GFEPQIRKIVKEI----PTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANK 375
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
I Q +E V +K+ L +L +Q G + + +F TK+ D L L F
Sbjct: 376 SITQHIEVVAPMEKQRRLEQILRSQEP----GSKVI--IFCSTKRMCDQLTRNLTRQ-FG 428
Query: 431 ATTIHGDRTQ-QRTSI 445
A IHGD++Q +R ++
Sbjct: 429 AAAIHGDKSQPERDNV 444
>WB|WBGene00001599 [details] [associations]
symbol:glh-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 569 (205.4 bits), Expect = 2.3e-54, P = 2.3e-54
Identities = 126/333 (37%), Positives = 186/333 (55%)
Query: 122 GINFDAYEDIPVETSGENVPPAVNT---FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI 178
G+ F+ + D V+ + + P V T F+E +LGE + N+ Y K TP+Q++ +P+
Sbjct: 526 GLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPL 585
Query: 179 SIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQ 238
G D+MACAQTGSGKTAAF PI++ ++ E + G YP +IL PTREL+ Q
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTA-GEGGCYPRCIILTPTRELTDQ 644
Query: 239 IHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMI 298
I+ E +KF+YQT +++ YGG + ++E+G I+V T GR+ E + L
Sbjct: 645 IYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKC 704
Query: 299 RYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLAN- 356
R+ LDEADRM+D MGF I IV MP RQT++FSATFP +Q A + L
Sbjct: 705 RFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEG 764
Query: 357 YIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQA-----LTLVFV 411
YI LA+ ++G++ ++Q E S+K+ L+++L + + K + T+VFV
Sbjct: 765 YIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVFV 824
Query: 412 ETKKGADALEHWLYMNGFPATTIHGDRTQQRTS 444
+ AD L L PA TIHG R Q+ S
Sbjct: 825 SQRAMADTLASILSSAQVPAITIHGAREQRERS 857
>UNIPROTKB|Q966L9 [details] [associations]
symbol:glh-2 "ATP-dependent RNA helicase glh-2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 569 (205.4 bits), Expect = 2.3e-54, P = 2.3e-54
Identities = 126/333 (37%), Positives = 186/333 (55%)
Query: 122 GINFDAYEDIPVETSGENVPPAVNT---FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI 178
G+ F+ + D V+ + + P V T F+E +LGE + N+ Y K TP+Q++ +P+
Sbjct: 526 GLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPL 585
Query: 179 SIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQ 238
G D+MACAQTGSGKTAAF PI++ ++ E + G YP +IL PTREL+ Q
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTA-GEGGCYPRCIILTPTRELTDQ 644
Query: 239 IHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMI 298
I+ E +KF+YQT +++ YGG + ++E+G I+V T GR+ E + L
Sbjct: 645 IYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKC 704
Query: 299 RYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLAN- 356
R+ LDEADRM+D MGF I IV MP RQT++FSATFP +Q A + L
Sbjct: 705 RFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEG 764
Query: 357 YIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQA-----LTLVFV 411
YI LA+ ++G++ ++Q E S+K+ L+++L + + K + T+VFV
Sbjct: 765 YIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVFV 824
Query: 412 ETKKGADALEHWLYMNGFPATTIHGDRTQQRTS 444
+ AD L L PA TIHG R Q+ S
Sbjct: 825 SQRAMADTLASILSSAQVPAITIHGAREQRERS 857
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 564 (203.6 bits), Expect = 6.8e-54, P = 6.8e-54
Identities = 133/323 (41%), Positives = 197/323 (60%)
Query: 130 DIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACA 189
++ + SG +P V +F E L + ++R + KPT +Q PI++ GRDL+ A
Sbjct: 222 ELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIA 281
Query: 190 QTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY- 248
QTGSGKT A+ P I I + + R G P+AL+LAPTREL+ QI + + +
Sbjct: 282 QTGSGKTLAYMLPAIVHIGNQPPIIRGEG-----PIALVLAPTRELAQQIQSVVRDYGHL 336
Query: 249 -QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEAD 307
+ ++ +GG+ Q R+L+RGV++++ATPGRL+D LE +LQ YL LDEAD
Sbjct: 337 CKPEIRHTCIFGGSSKVPQARDLDRGVEVIIATPGRLIDFLENRNTNLQRCTYLVLDEAD 396
Query: 308 RMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG- 366
RMLDMGFEPQIRKI++Q+ P RQ +++SAT+PKE+Q LA DFL +YI + +G +
Sbjct: 397 RMLDMGFEPQIRKIIEQI-RPD---RQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNL 452
Query: 367 SSTDLIVQRVEFVHESDKRSHLMDLLH--AQVAN-GVHGKQALTLVFVETKKGADALEHW 423
S+ I Q VE E +K L+ LL+ + + N G +G + + VFVETK + +
Sbjct: 453 SANHNIRQIVEICTEIEKPQRLVCLLNEISPIKNSGNNGNKII--VFVETKIKVEDILQI 510
Query: 424 LYMNGFPATTIHGDRTQ-QRTSI 445
+ G+ AT+IHGD+TQ +R S+
Sbjct: 511 IRAEGYNATSIHGDKTQNERDSV 533
>WB|WBGene00001600 [details] [associations]
symbol:glh-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0043186 "P granule" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA helicase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 121/335 (36%), Positives = 185/335 (55%)
Query: 120 NTGINFDAYEDIPVETSGENVPPAVN---TFAEIDLGEALNLNIRRCKYVKPTPVQRHAI 176
N G FD + D V+ P + +F++ D+ +++ N+ R Y + TP+Q++ +
Sbjct: 270 NAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTL 329
Query: 177 PISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELS 236
P+ G+D++ACAQTGSGKTAAF PI+S ++ E+ + YP +IL PTREL+
Sbjct: 330 PLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYG-AEGGCYPRCIILTPTRELA 388
Query: 237 SQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQ 296
QI+ E +KFSYQ+ +++ YGG + ++ +G I+V T GR+ E + L
Sbjct: 389 DQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLD 448
Query: 297 MIRYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLA 355
RYL LDEADRM+D MGF P+I +I+ +MP RQTM+FSATFP +Q A L
Sbjct: 449 KCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLR 508
Query: 356 -NYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQA-----LTLV 409
+Y + + ++G++ ++Q E + K L+ LL + K + T+V
Sbjct: 509 EDYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLKLLGIDIDTYTTEKNSDVFVKKTIV 568
Query: 410 FVETKKGADALEHWLYMNGFPATTIHGDRTQQRTS 444
FV +K AD L + PA TIHG R Q+ S
Sbjct: 569 FVAQQKMADTLASIMSAAQVPAITIHGAREQKERS 603
>UNIPROTKB|O01836 [details] [associations]
symbol:glh-3 "ATP-dependent RNA helicase glh-3"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 121/335 (36%), Positives = 185/335 (55%)
Query: 120 NTGINFDAYEDIPVETSGENVPPAVN---TFAEIDLGEALNLNIRRCKYVKPTPVQRHAI 176
N G FD + D V+ P + +F++ D+ +++ N+ R Y + TP+Q++ +
Sbjct: 270 NAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTL 329
Query: 177 PISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELS 236
P+ G+D++ACAQTGSGKTAAF PI+S ++ E+ + YP +IL PTREL+
Sbjct: 330 PLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYG-AEGGCYPRCIILTPTRELA 388
Query: 237 SQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQ 296
QI+ E +KFSYQ+ +++ YGG + ++ +G I+V T GR+ E + L
Sbjct: 389 DQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLD 448
Query: 297 MIRYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLA 355
RYL LDEADRM+D MGF P+I +I+ +MP RQTM+FSATFP +Q A L
Sbjct: 449 KCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLR 508
Query: 356 -NYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQA-----LTLV 409
+Y + + ++G++ ++Q E + K L+ LL + K + T+V
Sbjct: 509 EDYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLKLLGIDIDTYTTEKNSDVFVKKTIV 568
Query: 410 FVETKKGADALEHWLYMNGFPATTIHGDRTQQRTS 444
FV +K AD L + PA TIHG R Q+ S
Sbjct: 569 FVAQQKMADTLASIMSAAQVPAITIHGAREQKERS 603
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 129/313 (41%), Positives = 186/313 (59%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
E+ + G+ VP + F+E+ L + + IRR Y PT +Q PI++ G + +
Sbjct: 266 EEQEITVRGQ-VPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGI 324
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY 248
A+TGSGKT + P I I +Q +QR G P+AL+LAPTREL+ QI A +F
Sbjct: 325 AKTGSGKTLGYILPAIVHINNQQPLQRGDG-----PIALVLAPTRELAQQIQQVATEFGS 379
Query: 249 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 308
+ V+ +GGAP Q+R+L+RG +I++ATPGRL+D L +L+ YL LDEADR
Sbjct: 380 SSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADR 439
Query: 309 MLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-S 367
MLDMGFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL NYI + +G + S
Sbjct: 440 MLDMGFEPQIRKIVSQI-RPD---RQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELS 495
Query: 368 STDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMN 427
+ I Q V+ E K L LL + + + + ++FVETK+ D L ++
Sbjct: 496 ANHNIRQVVDVCDEFSKEEKLKTLL-SDIYDTSESPGKI-IIFVETKRRVDNLVRFIRSF 553
Query: 428 GFPATTIHGDRTQ 440
G IHGD++Q
Sbjct: 554 GVRCGAIHGDKSQ 566
>ASPGD|ASPL0000051195 [details] [associations]
symbol:AN1634 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
Length = 782
Score = 399 (145.5 bits), Expect = 1.0e-52, Sum P(3) = 1.0e-52
Identities = 84/197 (42%), Positives = 118/197 (59%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
ED + T G +VP + ++ E L + L + R Y +PTP+QR AIPI++ RDL+
Sbjct: 330 EDFNIATKGGSVPNPMRSWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAMQSRDLIGV 389
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY 248
A TGSGKTAAF P++ I + + P A++LAPTREL+ QI +EAKKF+
Sbjct: 390 AVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTE 449
Query: 249 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 308
G VV GG +Q L G +I++ATPGRLVD +ER + L Y+ +DEADR
Sbjct: 450 PLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRMLVLSQCCYVIMDEADR 509
Query: 309 MLDMGFEPQIRKIVQQM 325
M+D+GFE + KI+ +
Sbjct: 510 MIDLGFEEPVNKILDAL 526
Score = 161 (61.7 bits), Expect = 1.0e-52, Sum P(3) = 1.0e-52
Identities = 33/110 (30%), Positives = 60/110 (54%)
Query: 333 RQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLL 392
RQTM+++AT P ++R+A +L + +G G + D + QRVE + DKR +
Sbjct: 555 RQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRL--- 611
Query: 393 HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQR 442
++ + + + +VFV K+ DA+ + GF + T+HG +TQ++
Sbjct: 612 -GEILSSGDFRPPI-IVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQ 659
Score = 39 (18.8 bits), Expect = 1.0e-52, Sum P(3) = 1.0e-52
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 26 PRPTRSTYVPPHLRNKPPTSSEPPASSRE----STEPASGP 62
P P + PP + PP EP ++ + PA+ P
Sbjct: 30 PPPPDVSAPPPPPEDLPPPPPEPEVKKKKVGWGTKRPATTP 70
Score = 38 (18.4 bits), Expect = 1.3e-52, Sum P(3) = 1.3e-52
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 42 PPTSSEPPASSRESTEPASGP 62
P +S PP ES P P
Sbjct: 13 PEDASAPPPPPEESAAPPPPP 33
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 554 (200.1 bits), Expect = 1.5e-52, P = 1.5e-52
Identities = 130/310 (41%), Positives = 181/310 (58%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
V T+GEN+P TF L + + + PTP+Q PI++ RD++A A+TG
Sbjct: 423 VTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTG 482
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT + P ++R G P LILAPTREL++QI EA +F + +
Sbjct: 483 SGKTLGYLIPAFI-LLRHCRNDSRNG-----PTVLILAPTRELATQIQDEALRFGRSSRI 536
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
YGGAP QL+ELERG DI+VATPGRL D+LE + Q + L LDEADRMLDM
Sbjct: 537 SCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDM 596
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG--SSTD 370
GFEPQIRKIV ++ PP RQT++++AT+PKE++++ASD L N + + +GRV ++
Sbjct: 597 GFEPQIRKIVNEI--PP--RRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANK 652
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
I Q VE V + +K L +L +Q G + + +F TK+ D L + + F
Sbjct: 653 AITQYVEVVPQMEKERRLEQILRSQE----RGSKVI--IFCSTKRLCDHLARSVGRH-FG 705
Query: 431 ATTIHGDRTQ 440
A IHGD+TQ
Sbjct: 706 AVVIHGDKTQ 715
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 127/307 (41%), Positives = 183/307 (59%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
GENVP V + +I + + +++ V PTP+Q PI++ G+D++ A+TGSGKT
Sbjct: 105 GENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKT 164
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVV 256
AF P I+ + ++ G P+ L+LAPTREL+ QI E KFS ++ ++
Sbjct: 165 LAFILPAFVHILAQPNLKYGDG-----PIVLVLAPTRELAEQIRQECIKFSTESKIRNTC 219
Query: 257 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 316
AYGG P + Q+ L++GV IL+A PGRL+DLLE+ +L + YL LDEAD+MLDMGFE
Sbjct: 220 AYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFEL 279
Query: 317 QIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANY-IFLAVGRVG-SSTDLIVQ 374
QIRKIV Q+ P RQT+++SAT+PKE+Q LA D I + VG + ++ I Q
Sbjct: 280 QIRKIVDQI-RPD---RQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQ 335
Query: 375 RVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTI 434
+ + E +K +L LL + +VFVETKK AD + L ++G PA I
Sbjct: 336 EIYLLEEHEKIGNLKSLLQR-----IFKDNDRIIVFVETKKNADFITKALRLDGMPALCI 390
Query: 435 HGDRTQQ 441
HGD+ Q+
Sbjct: 391 HGDKKQE 397
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 127/307 (41%), Positives = 183/307 (59%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
GENVP V + +I + + +++ V PTP+Q PI++ G+D++ A+TGSGKT
Sbjct: 105 GENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKT 164
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVV 256
AF P I+ + ++ G P+ L+LAPTREL+ QI E KFS ++ ++
Sbjct: 165 LAFILPAFVHILAQPNLKYGDG-----PIVLVLAPTRELAEQIRQECIKFSTESKIRNTC 219
Query: 257 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 316
AYGG P + Q+ L++GV IL+A PGRL+DLLE+ +L + YL LDEAD+MLDMGFE
Sbjct: 220 AYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFEL 279
Query: 317 QIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANY-IFLAVGRVG-SSTDLIVQ 374
QIRKIV Q+ P RQT+++SAT+PKE+Q LA D I + VG + ++ I Q
Sbjct: 280 QIRKIVDQI-RPD---RQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQ 335
Query: 375 RVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTI 434
+ + E +K +L LL + +VFVETKK AD + L ++G PA I
Sbjct: 336 EIYLLEEHEKIGNLKSLLQR-----IFKDNDRIIVFVETKKNADFITKALRLDGMPALCI 390
Query: 435 HGDRTQQ 441
HGD+ Q+
Sbjct: 391 HGDKKQE 397
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 126/344 (36%), Positives = 191/344 (55%)
Query: 118 EENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAI 176
EE T ++ + ED + G +P + ++ E L L + R Y KP+P+Q AI
Sbjct: 285 EEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAI 344
Query: 177 PISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELS 236
P+ + RD++ A+TGSGKTAAF P+++ I R + + T P A+++APTREL+
Sbjct: 345 PLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEE--NETEGPYAVVMAPTRELA 402
Query: 237 SQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQ 296
QI E KF++ G +V GG I +Q ++ +G +I++ATPGRL+D LER L
Sbjct: 403 QQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLN 462
Query: 297 MIRYLALDEADRMLDMGFEPQIRKIVQQM---DMPPPG----------MRQTMLFSATFP 343
Y+ LDEADRM+DMGFEPQ+ ++ M ++ P R T +FSAT P
Sbjct: 463 QCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMP 522
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
++RLA +L N + + +G G +TDLI Q V + ES+K L LL G+
Sbjct: 523 PGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLLDEL------GE 576
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQRTSIEI 447
+ +VFV TKK D++ L G+ TT+HG ++Q++ I +
Sbjct: 577 KT-AIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISL 619
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 542 (195.9 bits), Expect = 2.0e-51, P = 2.0e-51
Identities = 124/317 (39%), Positives = 185/317 (58%)
Query: 125 FDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRD 184
F+ +++ + +G ++ V +F + L I + PTP+Q+ AIPI++ GRD
Sbjct: 285 FEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQAIAKQSIETPTPIQKQAIPIALSGRD 344
Query: 185 LMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAK 244
L+A A+TGSGKTA F +P IS IM + Y+++ G P+AL LAPTREL+ QI++E
Sbjct: 345 LIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDG-----PIALFLAPTRELAHQIYLETL 399
Query: 245 KFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALD 304
K+S +K V YGG QQ +EL+ G +I+VATPGRL+D+++ L + YL LD
Sbjct: 400 KYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKATKLNRVSYLVLD 459
Query: 305 EADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGR 364
EAD+M D GF PQ+ IV + P RQT+LFSATF ++ A L++ I +++G
Sbjct: 460 EADKMFDFGFGPQVLSIVNHV-RPD---RQTLLFSATFKPNVEEFARTILSDPIKISIGM 515
Query: 365 VGSSTDLIVQRVEFVH-ESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHW 423
+GS+ I Q V+ + +SDK + L + L ++ G L+FV TK + L
Sbjct: 516 IGSANSDITQIVQVLKSDSDKWNWLTNQLALLLSQGS------VLIFVSTKVAVEQLSSN 569
Query: 424 LYMNGFPATTIHGDRTQ 440
L GF T+HGD+ Q
Sbjct: 570 LTKFGFQTCTLHGDKNQ 586
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 541 (195.5 bits), Expect = 2.1e-51, P = 2.1e-51
Identities = 143/349 (40%), Positives = 196/349 (56%)
Query: 122 GINFDAYEDIPVETSG---ENVPPAVNTFAE--IDLGEALNLNIRRCKYVKPTPVQRHAI 176
G+NFD Y IPVE SG ENV A+ TF + ++L E L NI++ Y K TP+Q++++
Sbjct: 335 GVNFDLYNSIPVEISGFNSENVA-AIETFDDPSLNLNELLLSNIKKVNYDKTTPIQKYSL 393
Query: 177 PISIGGRDLMACAQTGSGKTAAFCFPIISGIM------REQYVQRPRGS-----RTVYPL 225
I + DL+ AQTGSGKTA + PII+ ++ Y Q + S R P+
Sbjct: 394 NIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDPPKHTYYEQNNKTSNYYFNRVCLPI 453
Query: 226 ALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLV 285
LILAPTREL+ QI +AKKF ++TG+K VV YGG I QL L++G DI+VATPGRL
Sbjct: 454 CLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLN 513
Query: 286 DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMR-QTMLFSATFPK 344
D+LE+ ++ L + +L LDEADRMLDMGF PQIR IV DMP T + K
Sbjct: 514 DILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMPGNDNDVHTSENKVEYKK 573
Query: 345 E----IQRLASDFLANYI----FLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQV 396
I+R F A + LA + T L+V +V +E K++ L+ +
Sbjct: 574 YCNDIIKRQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQN-LVFVEEENK 632
Query: 397 ANGV-----HGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
N + LT++FVETK+ AD +E +L A IHGD++Q
Sbjct: 633 CNYLLNLLAENNNGLTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQ 681
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 541 (195.5 bits), Expect = 2.1e-51, P = 2.1e-51
Identities = 143/349 (40%), Positives = 196/349 (56%)
Query: 122 GINFDAYEDIPVETSG---ENVPPAVNTFAE--IDLGEALNLNIRRCKYVKPTPVQRHAI 176
G+NFD Y IPVE SG ENV A+ TF + ++L E L NI++ Y K TP+Q++++
Sbjct: 335 GVNFDLYNSIPVEISGFNSENVA-AIETFDDPSLNLNELLLSNIKKVNYDKTTPIQKYSL 393
Query: 177 PISIGGRDLMACAQTGSGKTAAFCFPIISGIM------REQYVQRPRGS-----RTVYPL 225
I + DL+ AQTGSGKTA + PII+ ++ Y Q + S R P+
Sbjct: 394 NIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDPPKHTYYEQNNKTSNYYFNRVCLPI 453
Query: 226 ALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLV 285
LILAPTREL+ QI +AKKF ++TG+K VV YGG I QL L++G DI+VATPGRL
Sbjct: 454 CLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLN 513
Query: 286 DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMR-QTMLFSATFPK 344
D+LE+ ++ L + +L LDEADRMLDMGF PQIR IV DMP T + K
Sbjct: 514 DILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMPGNDNDVHTSENKVEYKK 573
Query: 345 E----IQRLASDFLANYI----FLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQV 396
I+R F A + LA + T L+V +V +E K++ L+ +
Sbjct: 574 YCNDIIKRQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQN-LVFVEEENK 632
Query: 397 ANGV-----HGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
N + LT++FVETK+ AD +E +L A IHGD++Q
Sbjct: 633 CNYLLNLLAENNNGLTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQ 681
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 536 (193.7 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 130/355 (36%), Positives = 199/355 (56%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGE 154
D + E PF + E P +A+ +N E + G+ P + T+ + +
Sbjct: 321 DHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLEMEGITVKGKGCPKPIKTWVQCGISM 380
Query: 155 ALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ 214
+ +++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ IM ++ ++
Sbjct: 381 KILTALKKHGYEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALE 440
Query: 215 RPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGV 274
G P+A+I+ PTREL+ QI E KKFS G++VV YGG I++Q+ EL+RG
Sbjct: 441 EGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 495
Query: 275 DILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 331
+I+V TPGR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV + P
Sbjct: 496 EIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD-- 552
Query: 332 MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDL 391
RQT++FSATFP+ ++ LA L+ I + VG + Q V + E +K L++L
Sbjct: 553 -RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEENKFLKLLEL 611
Query: 392 LHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QRTSI 445
L G + ++ ++FV+ ++ AD L L +P ++HG Q R SI
Sbjct: 612 L------GHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSI 660
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 532 (192.3 bits), Expect = 2.9e-50, P = 2.9e-50
Identities = 131/356 (36%), Positives = 200/356 (56%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGE 154
D + E PF + E P +A+ +N E + G+ P + ++ + +
Sbjct: 322 DHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISM 381
Query: 155 ALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ 214
+ ++++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ IM ++ ++
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441
Query: 215 RPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGV 274
G P+A+I+ PTREL+ QI E KKFS G++VV YGG I++Q+ EL+RG
Sbjct: 442 EGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 275 DILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 331
+I+V TPGR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV + P
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD-- 553
Query: 332 MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDL 391
RQT++FSATFP+ ++ LA L+ I + VG + Q+V + E K L++L
Sbjct: 554 -RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLEL 612
Query: 392 L-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QRTSI 445
L H Q + V ++FV+ ++ AD L L +P ++HG Q R SI
Sbjct: 613 LGHYQESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSI 661
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 532 (192.3 bits), Expect = 2.9e-50, P = 2.9e-50
Identities = 131/356 (36%), Positives = 200/356 (56%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGE 154
D + E PF + E P +A+ +N E + G+ P + ++ + +
Sbjct: 322 DHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISM 381
Query: 155 ALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ 214
+ ++++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ IM ++ ++
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441
Query: 215 RPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGV 274
G P+A+I+ PTREL+ QI E KKFS G++VV YGG I++Q+ EL+RG
Sbjct: 442 EGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 275 DILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 331
+I+V TPGR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV + P
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD-- 553
Query: 332 MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDL 391
RQT++FSATFP+ ++ LA L+ I + VG + Q+V + E K L++L
Sbjct: 554 -RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLEL 612
Query: 392 L-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QRTSI 445
L H Q + V ++FV+ ++ AD L L +P ++HG Q R SI
Sbjct: 613 LGHYQESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSI 661
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 532 (192.3 bits), Expect = 2.9e-50, P = 2.9e-50
Identities = 131/356 (36%), Positives = 200/356 (56%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGE 154
D + E PF + E P +A+ +N E + G+ P + ++ + +
Sbjct: 322 DHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISM 381
Query: 155 ALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ 214
+ ++++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ IM ++ ++
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441
Query: 215 RPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGV 274
G P+A+I+ PTREL+ QI E KKFS G++VV YGG I++Q+ EL+RG
Sbjct: 442 EGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 275 DILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 331
+I+V TPGR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV + P
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD-- 553
Query: 332 MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDL 391
RQT++FSATFP+ ++ LA L+ I + VG + Q+V + E K L++L
Sbjct: 554 -RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLEL 612
Query: 392 L-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QRTSI 445
L H Q + V ++FV+ ++ AD L L +P ++HG Q R SI
Sbjct: 613 LGHYQESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSI 661
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 532 (192.3 bits), Expect = 2.9e-50, P = 2.9e-50
Identities = 131/356 (36%), Positives = 200/356 (56%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGE 154
D + E PF + E P +A+ +N E + G+ P + ++ + +
Sbjct: 322 DHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISM 381
Query: 155 ALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ 214
+ ++++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ IM ++ ++
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441
Query: 215 RPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGV 274
G P+A+I+ PTREL+ QI E KKFS G++VV YGG I++Q+ EL+RG
Sbjct: 442 EGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 275 DILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 331
+I+V TPGR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV + P
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD-- 553
Query: 332 MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDL 391
RQT++FSATFP+ ++ LA L+ I + VG + Q+V + E K L++L
Sbjct: 554 -RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLEL 612
Query: 392 L-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QRTSI 445
L H Q + V ++FV+ ++ AD L L +P ++HG Q R SI
Sbjct: 613 LGHYQESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSI 661
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 532 (192.3 bits), Expect = 2.9e-50, P = 2.9e-50
Identities = 131/356 (36%), Positives = 200/356 (56%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGE 154
D + E PF + E P +A+ +N E + G+ P + ++ + +
Sbjct: 322 DHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISM 381
Query: 155 ALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ 214
+ ++++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ IM ++ ++
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441
Query: 215 RPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGV 274
G P+A+I+ PTREL+ QI E KKFS G++VV YGG I++Q+ EL+RG
Sbjct: 442 EGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 275 DILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 331
+I+V TPGR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV + P
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD-- 553
Query: 332 MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDL 391
RQT++FSATFP+ ++ LA L+ I + VG + Q+V + E K L++L
Sbjct: 554 -RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLEL 612
Query: 392 L-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QRTSI 445
L H Q + V ++FV+ ++ AD L L +P ++HG Q R SI
Sbjct: 613 LGHYQESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSI 661
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 532 (192.3 bits), Expect = 2.9e-50, P = 2.9e-50
Identities = 131/356 (36%), Positives = 200/356 (56%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGE 154
D + E PF + E P +A+ +N E + G+ P + ++ + +
Sbjct: 322 DHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISM 381
Query: 155 ALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ 214
+ ++++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ IM ++ ++
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441
Query: 215 RPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGV 274
G P+A+I+ PTREL+ QI E KKFS G++VV YGG I++Q+ EL+RG
Sbjct: 442 EGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 275 DILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 331
+I+V TPGR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV + P
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD-- 553
Query: 332 MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDL 391
RQT++FSATFP+ ++ LA L+ I + VG + Q+V + E K L++L
Sbjct: 554 -RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLEL 612
Query: 392 L-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QRTSI 445
L H Q + V ++FV+ ++ AD L L +P ++HG Q R SI
Sbjct: 613 LGHYQESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSI 661
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 528 (190.9 bits), Expect = 5.7e-50, P = 5.7e-50
Identities = 120/321 (37%), Positives = 182/321 (56%)
Query: 126 DAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDL 185
D + + SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD+
Sbjct: 234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293
Query: 186 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKK 245
+ A+TGSGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+
Sbjct: 294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKR 348
Query: 246 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 305
F ++ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DE
Sbjct: 349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408
Query: 306 ADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRV 365
ADRM DMGFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +
Sbjct: 409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464
Query: 366 GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY 425
G + + + Q VE +H K + L L ++G L+FV K A+ L + L
Sbjct: 465 GEANEDVTQIVEILHSGSKWNWLTRRLVEFTSSGS------VLLFVTKKANAEELANNLK 518
Query: 426 MNGFPATTIHGDRTQ-QRTSI 445
G +HGD Q +R +
Sbjct: 519 QEGHNLGLLHGDMDQSERNKV 539
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 529 (191.3 bits), Expect = 6.1e-50, P = 6.1e-50
Identities = 131/356 (36%), Positives = 200/356 (56%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGE 154
D + E PF + E P +A+ +N E + G+ P + ++ + +
Sbjct: 322 DHGKIEYEPFRKNFYVEVPELAKMSLEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISM 381
Query: 155 ALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ 214
+ ++++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ IM ++ ++
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441
Query: 215 RPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGV 274
G P+A+I+ PTREL+ QI E KKFS G++VV YGG I++Q+ EL+RG
Sbjct: 442 EGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 275 DILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 331
+I+V TPGR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV + P
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD-- 553
Query: 332 MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDL 391
RQT++FSATFP+ ++ LA L+ I + VG + Q+V + E K L++L
Sbjct: 554 -RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLEL 612
Query: 392 L-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QRTSI 445
L H Q + V ++FV+ ++ AD L L +P ++HG Q R SI
Sbjct: 613 LGHYQESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSI 661
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 527 (190.6 bits), Expect = 6.2e-50, P = 6.2e-50
Identities = 128/352 (36%), Positives = 187/352 (53%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEA 155
D E + +PF + E + + ++ SG P +FA E
Sbjct: 208 DHSEIDYSPFEKNFYNEHEEISSLTGAEVVELRRKLNLKVSGAAPPKPATSFAHFGFDEQ 267
Query: 156 LNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQR 215
L IR+ +Y +PTP+Q +PI++ GRD + A+TGSGKTAAF +PI+ IM ++ ++
Sbjct: 268 LMHQIRKSEYTQPTPIQCQGVPIALSGRDAIGIAKTGSGKTAAFIWPILVHIMDQKELEP 327
Query: 216 PRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVD 275
G P+A+I+ PTREL QIH E K+F G++ V YGG + +Q + L+ G +
Sbjct: 328 GEG-----PIAVIVCPTRELCQQIHAECKRFGKAYGLRSVAVYGGGSMWEQAKALQEGAE 382
Query: 276 ILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQT 335
I+V TPGRL+D +++ SLQ + +L DEADRM DMGFE Q+R I + P RQT
Sbjct: 383 IVVCTPGRLIDHVKKKATSLQRVTFLVFDEADRMFDMGFEYQVRSIASHV-RPD---RQT 438
Query: 336 MLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHES-DKRSHLMDLLHA 394
+LFSATF K+I++LA D L + I + G +G + + I Q VE + DK L L
Sbjct: 439 LLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDITQIVEVLQSGQDKWGWLTRRLVE 498
Query: 395 QVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QRTSI 445
+ G LVFV K + L L G+ +HGD Q +R +
Sbjct: 499 FTSAGS------VLVFVTKKANCEELATNLIQEGYSLGLLHGDMDQSERNKV 544
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 528 (190.9 bits), Expect = 1.1e-49, P = 1.1e-49
Identities = 125/357 (35%), Positives = 205/357 (57%)
Query: 96 DRREREVNPFGDDVGAE-QPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLG 153
D + E PF + E + ++ +N Y +++ ++ G++VP + + + L
Sbjct: 480 DHSKIEYEPFRKNFYIEVKDISRMTQEEVN--TYRKELELKVHGKDVPRPIKFWHQTGLT 537
Query: 154 EALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYV 213
+ +++ Y KP P+Q A+PI + GRD + A+TGSGKT F P++ I + V
Sbjct: 538 SKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPV 597
Query: 214 QRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERG 273
+ G P+ L++APTREL QIH + +KFS G++ V YGG+ + QQ+ EL+RG
Sbjct: 598 EAGDG-----PIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRG 652
Query: 274 VDILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPP 330
+I+V TPGR++D+L +++ L+ + +L +DEADRM DMGFEPQI +I+Q + P
Sbjct: 653 TEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNI-RPE- 710
Query: 331 GMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMD 390
RQT+LFSATFP++++ LA L + + VG I Q VE ESD+ L++
Sbjct: 711 --RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLE 768
Query: 391 LLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHG--DRTQQRTSI 445
LL G ++ LVFV++++ DAL + + +P ++HG D+T + ++I
Sbjct: 769 LL------GEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTI 819
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 528 (190.9 bits), Expect = 1.1e-49, P = 1.1e-49
Identities = 128/330 (38%), Positives = 191/330 (57%)
Query: 115 VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLG-EALNLNIRRCKYVKPTPVQR 173
++EEE + + + I V G +VP V +++ LG + L++ I + + T +Q
Sbjct: 514 MSEEEAANLRLEL-DGIKVR--GLDVPKPVQKWSQCGLGIQTLDV-IDKLGFASLTSIQA 569
Query: 174 HAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTR 233
AIP + GRD++ A+TGSGKT AF P+ I ++ ++ G P+ LI+ PTR
Sbjct: 570 QAIPAIMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEG-----PIGLIMTPTR 624
Query: 234 ELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERA 291
EL++QIH + K F ++ V AYGGAPI Q+ EL+RG +I+V TPGR++DLL
Sbjct: 625 ELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAG 684
Query: 292 RVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLA 350
RV+ L+ + Y+ LDEADRM DMGFEPQ+ KI+ + P RQT+LFSATFP+ ++ LA
Sbjct: 685 RVTNLRRVTYVVLDEADRMFDMGFEPQVMKILSNV-RPD---RQTVLFSATFPRNMEALA 740
Query: 351 SDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
L I + VG I Q VE +E K L++LL + + + A +L+F
Sbjct: 741 RKTLTKPIEIVVGGRSVVAPEITQIVEVCNEEKKFVRLLELL-GNLYSTDENEDARSLIF 799
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQ 440
V+ ++ AD L L G+P +IHG + Q
Sbjct: 800 VDRQEAADTLLRELMRKGYPCMSIHGGKDQ 829
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 118/276 (42%), Positives = 167/276 (60%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
Y +PTP+Q+ AIP + GRDLMA AQTG+GKTA F P++ ++ Q +G R V
Sbjct: 21 YREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQ--PHAKGRRPVR- 77
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
ALIL PTREL++QI + +S ++ +V +GG IN Q+ +L GVD+LVATPGRL
Sbjct: 78 -ALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRL 136
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+DL + V L + L LDEADRMLDMGF IR+++ ++ P RQ +LFSATF
Sbjct: 137 LDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL----PAKRQNLLFSATFSD 192
Query: 345 EIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQ 404
+I+ LA L N + + V R +++D + Q V FV + KR +LL + G + +Q
Sbjct: 193 DIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKR----ELLSHMIGKG-NWQQ 247
Query: 405 ALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
L VF TK GA+ L L +G + IHG+++Q
Sbjct: 248 VL--VFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 130/331 (39%), Positives = 182/331 (54%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLG-EALNLNIRRCKYVKPTP 170
E + +EN I D +D T +P V TF E + NI R + KPTP
Sbjct: 248 EVKIWRKENNNIFVDDLKDGDKRT----IPNPVCTFEEAFAHYPGIMENIVRVGFKKPTP 303
Query: 171 VQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILA 230
+Q A P+ + G DL+ AQTG+GKT A+ P G + PR R P L+L
Sbjct: 304 IQSQAWPVVLNGIDLIGIAQTGTGKTLAYLLP---GFIHMDGQPMPRDKRNG-PGMLVLT 359
Query: 231 PTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLER 290
PTREL+ QI E K+SY+ G K + YGG N Q++ + GVDI++ATPGRL DL
Sbjct: 360 PTRELALQIEAECNKYSYK-GFKSICIYGGGDRNAQIKVVTSGVDIVIATPGRLNDLQMN 418
Query: 291 ARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLA 350
++L+ I YL LDEADRMLDMGFEPQI KI+ +D+ P RQT++ SAT+P ++RLA
Sbjct: 419 ELINLRSITYLVLDEADRMLDMGFEPQIMKII--LDIRPD--RQTVMTSATWPPGVRRLA 474
Query: 351 SDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLV 409
+L + + + VG + ++ + + Q V FV E +K+ ++ D +H L+
Sbjct: 475 KSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQEDEKKDYVFDFIHRMEPLDK------VLI 528
Query: 410 FVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
FV K AD L L + G ++HGDR Q
Sbjct: 529 FVGKKLKADDLSSDLCLQGIAVQSLHGDREQ 559
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 519 (187.8 bits), Expect = 5.0e-49, P = 5.0e-49
Identities = 117/321 (36%), Positives = 181/321 (56%)
Query: 126 DAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDL 185
D + + SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD+
Sbjct: 234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293
Query: 186 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKK 245
+ A+TGSGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+
Sbjct: 294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKR 348
Query: 246 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 305
F ++ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DE
Sbjct: 349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408
Query: 306 ADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRV 365
ADRM DMGFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +
Sbjct: 409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464
Query: 366 GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY 425
G + + + Q VE +H + + + + + G L+FV K A+ L + L
Sbjct: 465 GEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELANNLK 519
Query: 426 MNGFPATTIHGDRTQ-QRTSI 445
G +HGD Q +R +
Sbjct: 520 QEGHNLGLLHGDMDQSERNKV 540
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 519 (187.8 bits), Expect = 5.1e-49, P = 5.1e-49
Identities = 117/321 (36%), Positives = 181/321 (56%)
Query: 126 DAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDL 185
D + + SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD+
Sbjct: 234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293
Query: 186 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKK 245
+ A+TGSGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+
Sbjct: 294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKR 348
Query: 246 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 305
F ++ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DE
Sbjct: 349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408
Query: 306 ADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRV 365
ADRM DMGFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +
Sbjct: 409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464
Query: 366 GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY 425
G + + + Q VE +H + + + + + G L+FV K A+ L + L
Sbjct: 465 GEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELANNLK 519
Query: 426 MNGFPATTIHGDRTQ-QRTSI 445
G +HGD Q +R +
Sbjct: 520 QEGHNLGLLHGDMDQSERNKV 540
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 519 (187.8 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 117/321 (36%), Positives = 181/321 (56%)
Query: 126 DAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDL 185
D + + SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD+
Sbjct: 234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293
Query: 186 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKK 245
+ A+TGSGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+
Sbjct: 294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKR 348
Query: 246 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 305
F ++ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DE
Sbjct: 349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408
Query: 306 ADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRV 365
ADRM DMGFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +
Sbjct: 409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464
Query: 366 GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY 425
G + + + Q VE +H + + + + + G L+FV K A+ L + L
Sbjct: 465 GEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELANNLK 519
Query: 426 MNGFPATTIHGDRTQ-QRTSI 445
G +HGD Q +R +
Sbjct: 520 QEGHNLGLLHGDMDQSERNKV 540
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 519 (187.8 bits), Expect = 5.3e-49, P = 5.3e-49
Identities = 117/321 (36%), Positives = 181/321 (56%)
Query: 126 DAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDL 185
D + + SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD+
Sbjct: 234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293
Query: 186 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKK 245
+ A+TGSGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+
Sbjct: 294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAEGKR 348
Query: 246 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 305
F ++ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DE
Sbjct: 349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408
Query: 306 ADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRV 365
ADRM DMGFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +
Sbjct: 409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464
Query: 366 GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY 425
G + + + Q VE +H + + + + + G L+FV K A+ L + L
Sbjct: 465 GEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELANNLK 519
Query: 426 MNGFPATTIHGDRTQ-QRTSI 445
G +HGD Q +R +
Sbjct: 520 QEGHNLGLLHGDMDQSERNKV 540
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 517 (187.1 bits), Expect = 8.3e-49, P = 8.3e-49
Identities = 117/321 (36%), Positives = 180/321 (56%)
Query: 126 DAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDL 185
D + + SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD+
Sbjct: 234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293
Query: 186 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKK 245
+ A+TGSGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+
Sbjct: 294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKR 348
Query: 246 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 305
F ++ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DE
Sbjct: 349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408
Query: 306 ADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRV 365
ADRM DMGFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +
Sbjct: 409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464
Query: 366 GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY 425
G + + + Q VE +H + + + + + G L+FV K A+ L L
Sbjct: 465 GEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELASNLK 519
Query: 426 MNGFPATTIHGDRTQ-QRTSI 445
G +HGD Q +R +
Sbjct: 520 QEGHNLGLLHGDMDQSERNKV 540
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 130/328 (39%), Positives = 190/328 (57%)
Query: 118 EENTGINFDAYEDIPVETSGENVPPAVN---TFAEI--DLGEALNLNIRRCKYVKPTPVQ 172
EEN I +Y P E GE PP N TF + + + L I + + KP+P+Q
Sbjct: 255 EENNKITV-SYVFEPKE--GETSPPIPNPVWTFEQCFAEYPDMLE-EITKMGFSKPSPIQ 310
Query: 173 RHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPT 232
A PI + G D++ AQTG+GKT AF P G++ +Y PRG+R + L+LAPT
Sbjct: 311 SQAWPILLQGHDMIGIAQTGTGKTLAFLLP---GMIHTEYQSTPRGTRGGANV-LVLAPT 366
Query: 233 RELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERAR 292
REL+ QI +E KK+S++ G+K V YGG N Q+ +LERG +I++ TPGRL DL+
Sbjct: 367 RELALQIEMEVKKYSFR-GMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANV 425
Query: 293 VSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASD 352
+ + I YL LDEADRMLDMGFEPQIRK++ +D+ P RQT++ SAT+P ++RLA
Sbjct: 426 IDVSTITYLVLDEADRMLDMGFEPQIRKVM--LDIRPD--RQTIMTSATWPPGVRRLAQS 481
Query: 353 FLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVE 412
++ N I + VG + + V+++ + E D + + + V N + + ++F
Sbjct: 482 YMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDK--FNTITSFVKN-MSSTDKI-IIFCG 537
Query: 413 TKKGADALEHWLYMNGFPATTIHGDRTQ 440
K AD L L ++GF IHG+R Q
Sbjct: 538 RKVRADDLSSELTLDGFMTQCIHGNRDQ 565
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 123/337 (36%), Positives = 186/337 (55%)
Query: 115 VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVK-PTPVQR 173
++EEE + ++ + GE P + +F E+ + + LN K +K PTP+Q
Sbjct: 151 MSEEEREAVR----HELRILVEGETPSPPIRSFREMKFPKGI-LNGLAAKGIKNPTPIQV 205
Query: 174 HAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTR 233
+P + GRDL+ A TGSGKT F P+I + ++Y P R P LI+ P+R
Sbjct: 206 QGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEY-SLPF-ERNEGPYGLIICPSR 263
Query: 234 ELSSQIHVEAKKFSYQT---G---VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDL 287
EL+ Q H + +S G ++ +A GG P+++ L + RGV I+VATPGRL+D+
Sbjct: 264 ELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDM 323
Query: 288 LERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQ 347
L++ ++L M RYL +DEADRM+DMGFE +R I G RQT+LFSAT PK+IQ
Sbjct: 324 LDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFK----GQRQTLLFSATMPKKIQ 379
Query: 348 RLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALT 407
A L + + VGR G+++ + Q+VE+V + K +L+D L + A V
Sbjct: 380 NFARSALVKPVTINVGRAGAASMNVTQQVEYVKQEAKVVYLLDCLQ-KTAPPV------- 431
Query: 408 LVFVETKKGADALEHWLYMNGFPATTIHGDRTQQRTS 444
L+F E K+ D + +L + G A IHG + Q+ S
Sbjct: 432 LIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERS 468
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 124/318 (38%), Positives = 177/318 (55%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
GE +PP + +F E+ A+ +++ +PTP+Q IP + GRD++ A TGSGKT
Sbjct: 169 GEGIPPPIKSFKEMKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKT 228
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VEAKKFSYQTG--- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E Q
Sbjct: 229 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGIIEYYCRLLQEDSLP 286
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
++ + GG + +Q+ ++ GV ++VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 287 PLRCALCIGGMSVKEQMETIKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 346
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L I + VGR G+++
Sbjct: 347 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASL 402
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
+VQ VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 403 DVVQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 454
Query: 431 ATTIHGDRTQQ-RT-SIE 446
A IHG + Q+ RT +IE
Sbjct: 455 AVAIHGGKDQEERTKAIE 472
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 121/318 (38%), Positives = 178/318 (55%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+ +PP + +F E+ L A+ +++ + PTP+Q IP + GRD++ A TGSGKT
Sbjct: 173 GDGIPPPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VE--AKKFSYQTG- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E + +
Sbjct: 233 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
++ + GG + +Q+ + GV ++VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L + + VGR G+++
Sbjct: 351 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 406
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
++Q VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 407 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 458
Query: 431 ATTIHGDRTQQ-RT-SIE 446
A IHG + Q+ RT +IE
Sbjct: 459 AVAIHGGKDQEERTKAIE 476
>UNIPROTKB|B4E132 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
Ensembl:ENST00000420730 Uniprot:B4E132
Length = 407
Score = 474 (171.9 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 95/152 (62%), Positives = 117/152 (76%)
Query: 290 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRL 349
R ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFPKEIQ L
Sbjct: 78 RGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQML 137
Query: 350 ASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLV 409
A DFL YIFLAVGRVGS+++ I Q+V +V + DKRS L+D+L G G +LTLV
Sbjct: 138 ARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDIL------GATGSDSLTLV 191
Query: 410 FVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
FVETKKGAD+LE +LY G+ T+IHGDR+Q+
Sbjct: 192 FVETKKGADSLEDFLYHEGYACTSIHGDRSQR 223
Score = 51 (23.0 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 29 TRSTYVPPHLRNK 41
++ Y+PPHLRN+
Sbjct: 34 SKGRYIPPHLRNR 46
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 516 (186.7 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 116/311 (37%), Positives = 178/311 (57%)
Query: 136 SGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGK 195
SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD++ A+TGSGK
Sbjct: 244 SGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGK 303
Query: 196 TAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVV 255
TAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+F ++ V
Sbjct: 304 TAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKRFGKAYNLRSV 358
Query: 256 VAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFE 315
YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DEADRM DMGFE
Sbjct: 359 AVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFE 418
Query: 316 PQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQR 375
Q+R I + P RQT+LFSATF K+I++LA D L + I + G +G + + + Q
Sbjct: 419 YQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI 474
Query: 376 VEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIH 435
VE +H + + + + + G L+FV K A+ L + L G +H
Sbjct: 475 VEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELANNLKQEGHNLGLLH 529
Query: 436 GDRTQ-QRTSI 445
GD Q +R +
Sbjct: 530 GDMDQSERNKV 540
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 515 (186.3 bits), Expect = 2.0e-48, P = 2.0e-48
Identities = 129/356 (36%), Positives = 198/356 (55%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLG- 153
D ++ + PF + E P +A ++ E + G+ P + T+ + +
Sbjct: 307 DHQKIQYEPFRKNFYVEVPELARMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQCGISM 366
Query: 154 EALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYV 213
+ LN +++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ I+
Sbjct: 367 KVLNA-LKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILD---- 421
Query: 214 QRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERG 273
QRP G PLA+I+ PTREL+ QI E KKFS ++VV YGG I++Q+ EL+RG
Sbjct: 422 QRPVGEAEG-PLAVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQIAELKRG 480
Query: 274 VDILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPP 330
+I+V TPGR++D+L RV+ L+ + Y+ +DEADRM DMGFEPQ+ +IV + P
Sbjct: 481 AEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMRIVDNV-RPD- 538
Query: 331 GMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMD 390
RQT++FSATFP+ ++ LA L+ + + VG + Q V + E K L++
Sbjct: 539 --RQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLLE 596
Query: 391 LLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QRTSI 445
+L G + ++ ++FV+ ++ AD L L +P ++HG Q R SI
Sbjct: 597 IL------GHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSI 646
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 502 (181.8 bits), Expect = 2.1e-48, Sum P(2) = 2.1e-48
Identities = 127/335 (37%), Positives = 193/335 (57%)
Query: 112 EQPV-AEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTP 170
E PV A T + D ++ V+ +G++ P + ++A+ L E ++L +++ +Y KPT
Sbjct: 476 EVPVLANMTETEV-LDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQYEKPTS 534
Query: 171 VQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILA 230
+Q IP + GRDL+ A+TGSGKT AF P+ I+ + P+ + +ALI++
Sbjct: 535 IQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQ-----PKSAPGEGMIALIMS 589
Query: 231 PTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL-- 288
PTREL+ QIHVE KKFS G++ YGGA I++Q+ EL+RG DI+V TPGR++D+L
Sbjct: 590 PTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCA 649
Query: 289 -ERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQ 347
R +L+ + +L LDEADRM DMGF PQI IV + P RQT++FSATFP +++
Sbjct: 650 NNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSI-RPD---RQTIMFSATFPPKVE 705
Query: 348 RLASDFLANYI-FLAVGRVGSSTDLIVQRVEFVHESDKR-SHLMDLLHAQVANGVHGKQA 405
+A L + +A GR S+D I Q VE V ++ R L++LL G
Sbjct: 706 NVAKKILNKPLEIIAGGRSIVSSD-IEQFVE-VRPTETRFRRLIELLSIWYHKGQ----- 758
Query: 406 LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
L+F ++ D L L + + ++HG + Q
Sbjct: 759 -ILIFTNRQETTDNLYRQLSNSQYQCLSLHGSKDQ 792
Score = 42 (19.8 bits), Expect = 2.1e-48, Sum P(2) = 2.1e-48
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 26 PRPTRSTYVPPHLRNKPPTSSEPPASSRESTEPASGP 62
P+ T PH++ PP P SR P + P
Sbjct: 112 PQQQTQTQQQPHIQAPPPAK---PRKSRFDQAPETIP 145
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 509 (184.2 bits), Expect = 2.6e-48, P = 2.6e-48
Identities = 117/309 (37%), Positives = 180/309 (58%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
V+ +G + P V +F E L +R+ +Y +PTP+Q A+P ++ GRD++ A+TG
Sbjct: 257 VKVTGPSPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTG 316
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKTAAF +P++ +M ++ ++ G P+ LILAPTRELS QI+ EAKKF +
Sbjct: 317 SGKTAAFIWPMLMHVMDQKQLKPGDG-----PIGLILAPTRELSLQIYNEAKKFGKVYNL 371
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
VV YGG +Q + LE+G +I+VATPGR++D+++ +L+ + +L LDEADRM M
Sbjct: 372 NVVCCYGGGSKWEQSKALEQGAEIIVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHM 431
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLI 372
GFEPQ+R I + P RQ ++FSATF K I+RLA D L++ + + G + + I
Sbjct: 432 GFEPQVRSICNHV-RPD---RQCLMFSATFKKRIERLARDVLSDPVRIVQGDLNEANQDI 487
Query: 373 VQRVE-FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
Q V F + K + L+ L ++ G L+FV K A+ + + L + +
Sbjct: 488 TQSVYVFPNPLQKWNWLLCHLVKFLSEGS------VLIFVTKKVDAETVSNNLLIKEYNC 541
Query: 432 TTIHGDRTQ 440
+HGD Q
Sbjct: 542 LLLHGDMDQ 550
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 120/318 (37%), Positives = 177/318 (55%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+ +PP + +F E+ A+ +++ + PTP+Q IP + GRD++ A TGSGKT
Sbjct: 173 GDGIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VE--AKKFSYQTG- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E + +
Sbjct: 233 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
++ + GG + +Q+ + GV ++VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L + + VGR G+++
Sbjct: 351 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 406
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
++Q VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 407 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 458
Query: 431 ATTIHGDRTQQ-RT-SIE 446
A IHG + Q+ RT +IE
Sbjct: 459 AVAIHGGKDQEERTKAIE 476
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 121/318 (38%), Positives = 177/318 (55%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+ +PP + +F E+ L A+ +++ + PTP+Q IP + GRD++ A TGSGKT
Sbjct: 172 GDGIPPPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 231
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VE--AKKFSYQTG- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E + +
Sbjct: 232 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 289
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
+ + GG + +Q+ + GV I+VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 290 LLHCALCIGGVSLKEQMETMRHGVHIMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 349
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L + + VGR G+++
Sbjct: 350 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 405
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
++Q VE+V E K +L++ L L+F + K DA+ +L + G
Sbjct: 406 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAKKKADVDAIHEYLLLKGVE 457
Query: 431 ATTIHGDRTQQ-RT-SIE 446
A IHG + Q+ RT +IE
Sbjct: 458 AVAIHGGKDQEERTKAIE 475
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 503 (182.1 bits), Expect = 3.6e-48, Sum P(2) = 3.6e-48
Identities = 121/338 (35%), Positives = 192/338 (56%)
Query: 104 PFGDDVGAEQPVAEEENTGINFDAYE-DIP-VETSGENVPPAVNTFAEIDLGEALNLNIR 161
PF + E P T + + Y D+ ++ G+ P + T+A+ + + +R
Sbjct: 468 PFRKNFYVEVPELTRM-TAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLR 526
Query: 162 RCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRT 221
R + KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ I+ + ++ G+
Sbjct: 527 RLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGA-- 584
Query: 222 VYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATP 281
+A+I+APTREL QI + +KFS G++ V YGG I++Q+ EL+RG +I+V TP
Sbjct: 585 ---IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTP 641
Query: 282 GRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLF 338
GR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +I+ + P RQT++F
Sbjct: 642 GRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNV-RPD---RQTVMF 697
Query: 339 SATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVAN 398
SATFP++++ LA L I + VG + Q V +++ K L++LL
Sbjct: 698 SATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELL------ 751
Query: 399 GVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHG 436
G++ + +VFV+ ++ AD L L +P ++HG
Sbjct: 752 GIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHG 789
Score = 40 (19.1 bits), Expect = 3.6e-48, Sum P(2) = 3.6e-48
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 27 RPTRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWGSGSR 69
R T++ V P L N S S + + PA P SG +
Sbjct: 210 RDTKAAVVAPSLVNSAKKWSLEDESEEDDSNPA--PPLDSGKK 250
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 120/318 (37%), Positives = 176/318 (55%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+ +PP + +F E+ A+ +++ PTP+Q IP + GRD++ A TGSGKT
Sbjct: 173 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VE--AKKFSYQTG- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E + +
Sbjct: 233 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
++ + GG + +Q+ + GV ++VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L + + VGR G+++
Sbjct: 351 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 406
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
++Q VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 407 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 458
Query: 431 ATTIHGDRTQQ-RT-SIE 446
A IHG + Q+ RT +IE
Sbjct: 459 AVAIHGGKDQEERTKAIE 476
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 120/318 (37%), Positives = 176/318 (55%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+ +PP + +F E+ A+ +++ PTP+Q IP + GRD++ A TGSGKT
Sbjct: 173 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VE--AKKFSYQTG- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E + +
Sbjct: 233 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
++ + GG + +Q+ + GV ++VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L + + VGR G+++
Sbjct: 351 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 406
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
++Q VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 407 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 458
Query: 431 ATTIHGDRTQQ-RT-SIE 446
A IHG + Q+ RT +IE
Sbjct: 459 AVAIHGGKDQEERTKAIE 476
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 120/318 (37%), Positives = 176/318 (55%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+ +PP + +F E+ A+ +++ PTP+Q IP + GRD++ A TGSGKT
Sbjct: 200 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 259
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VE--AKKFSYQTG- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E + +
Sbjct: 260 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 317
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
++ + GG + +Q+ + GV ++VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 318 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 377
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L + + VGR G+++
Sbjct: 378 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 433
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
++Q VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 434 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 485
Query: 431 ATTIHGDRTQQ-RT-SIE 446
A IHG + Q+ RT +IE
Sbjct: 486 AVAIHGGKDQEERTKAIE 503
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 120/318 (37%), Positives = 176/318 (55%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+ +PP + +F E+ A+ +++ PTP+Q IP + GRD++ A TGSGKT
Sbjct: 191 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 250
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VE--AKKFSYQTG- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E + +
Sbjct: 251 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 308
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
++ + GG + +Q+ + GV ++VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 309 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 368
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L + + VGR G+++
Sbjct: 369 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 424
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
++Q VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 425 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 476
Query: 431 ATTIHGDRTQQ-RT-SIE 446
A IHG + Q+ RT +IE
Sbjct: 477 AVAIHGGKDQEERTKAIE 494
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 120/318 (37%), Positives = 176/318 (55%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+ +PP + +F E+ A+ +++ PTP+Q IP + GRD++ A TGSGKT
Sbjct: 173 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VE--AKKFSYQTG- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E + +
Sbjct: 233 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
++ + GG + +Q+ + GV ++VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L + + VGR G+++
Sbjct: 351 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 406
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
++Q VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 407 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 458
Query: 431 ATTIHGDRTQQ-RT-SIE 446
A IHG + Q+ RT +IE
Sbjct: 459 AVAIHGGKDQEERTKAIE 476
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 121/297 (40%), Positives = 169/297 (56%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F + L L IR YV+PTPVQR AIP+ + RD+M AQTG+GKTA F P++
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70
Query: 206 GIMREQYVQRPRGSRTVYPL--ALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
+ +V RP R+ P+ ALIL PTREL+ Q+ + + +K V +GG I
Sbjct: 71 RL----FVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSI 126
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
Q+ L RGVDILVATPGRL+DL+ + ++L + + LDEADRMLDMGF P IR+I++
Sbjct: 127 KPQINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILK 186
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ P RQ +LFSATF KEI+ L L + + V R ++ I VH D
Sbjct: 187 LL----PESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITH---VVHPVD 239
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
R +LL + + + +Q L VF TK GA+ L L +G + IHG+++Q
Sbjct: 240 -RQRKRELLSFMIGSK-NWRQVL--VFTRTKHGANRLSQQLESDGLSSAAIHGNKSQ 292
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 121/297 (40%), Positives = 169/297 (56%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F + L L IR YV+PTPVQR AIP+ + RD+M AQTG+GKTA F P++
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70
Query: 206 GIMREQYVQRPRGSRTVYPL--ALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
+ +V RP R+ P+ ALIL PTREL+ Q+ + + +K V +GG I
Sbjct: 71 RL----FVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSI 126
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
Q+ L RGVDILVATPGRL+DL+ + ++L + + LDEADRMLDMGF P IR+I++
Sbjct: 127 KPQINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILK 186
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ P RQ +LFSATF KEI+ L L + + V R ++ I VH D
Sbjct: 187 LL----PESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITH---VVHPVD 239
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
R +LL + + + +Q L VF TK GA+ L L +G + IHG+++Q
Sbjct: 240 -RQRKRELLSFMIGSK-NWRQVL--VFTRTKHGANRLSQQLESDGLSSAAIHGNKSQ 292
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 118/315 (37%), Positives = 178/315 (56%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD++ A+TG
Sbjct: 236 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTG 295
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+F +
Sbjct: 296 SGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHSECKRFGKAYNL 350
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
+ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DEADRM DM
Sbjct: 351 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDM 410
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLI 372
GFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +G + + +
Sbjct: 411 GFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDV 466
Query: 373 VQRVE-FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
Q VE F K + L L ++G L+FV K A+ L + L
Sbjct: 467 TQIVEIFPSGPSKWNWLTRRLVEFTSSGS------VLLFVTKKANAEELANNLKQEDHNL 520
Query: 432 TTIHGDRTQ-QRTSI 445
+HGD Q +R +
Sbjct: 521 GLLHGDMDQSERNKV 535
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 123/301 (40%), Positives = 169/301 (56%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+FA + L EAL I Y +PTPVQ+ AIP + GRDLM AQTG+GKT F PI+
Sbjct: 2 SFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVA--YGGAPI 263
+ + + + P L+L PTREL++Q+H K Y +K V A +GG +
Sbjct: 62 RLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKL--YARDLKFVSACIFGGVGM 119
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
N Q++ + RGVD+LVA PGRL+DL + V L + L LDEADRMLDMGF ++K++
Sbjct: 120 NPQVQAMARGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLA 179
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
++ P RQ +LFSATF K+I LA L N + V ++ + I QRV + S
Sbjct: 180 RL----PAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASH 235
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ-R 442
KR+ L L+ A G LVF TK GA+ L +L +G A IHG+++Q R
Sbjct: 236 KRALLAHLITA-------GAWEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNAR 288
Query: 443 T 443
T
Sbjct: 289 T 289
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 493 (178.6 bits), Expect = 2.1e-47, Sum P(2) = 2.1e-47
Identities = 120/311 (38%), Positives = 174/311 (55%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
++ G + P V ++++ L I Y KPT +Q AIP GRD++ A+TG
Sbjct: 406 IKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTG 465
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT AF P+ I ++ ++ G P+A+I+ PTREL+ QI E K F +
Sbjct: 466 SGKTIAFLLPMFRHIKDQRPLKTGEG-----PIAIIMTPTRELAVQIFRECKPFLKLLNI 520
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLER--ARVS-LQMIRYLALDEADRM 309
+ AYGGAPI Q+ +L+RG +I+V TPGR++D+L RV+ L YL LDEADRM
Sbjct: 521 RACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRM 580
Query: 310 LDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSST 369
D+GFEPQ+ +I+ + P RQT+LFSATFP+ ++ LA L + + VG
Sbjct: 581 FDLGFEPQVMRIINNI-RPD---RQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVA 636
Query: 370 DLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGF 429
+ Q VE E K S L++LL N + + TLVFV+ ++ ADAL L G+
Sbjct: 637 SEVEQIVEVRPEESKFSRLLELLGELYNNQLDVR---TLVFVDRQESADALLSDLMKRGY 693
Query: 430 PATTIHGDRTQ 440
+ +IHG + Q
Sbjct: 694 TSNSIHGGKDQ 704
Score = 39 (18.8 bits), Expect = 2.1e-47, Sum P(2) = 2.1e-47
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 109 VGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNT 146
+G EQ + EE+ DAY V T+ P +NT
Sbjct: 289 LGNEQAASMEEDEVDPLDAYMASLVGTTDTIRPGLLNT 326
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 116/299 (38%), Positives = 168/299 (56%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
++ F + L + ++ + Y PTP+Q AIP+ I GRD++ AQTG+GKT AF PI
Sbjct: 6 MSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPI 65
Query: 204 ISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
+ + R RG+R L+LAPTREL+ QI + ++VV+ GGA I
Sbjct: 66 LDRLSRNASPAPVRGTRV-----LVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKI 120
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
Q+R+LERG ILVATPGRL+DL+E+ VSL + L LDEAD+MLD+GF +R I +
Sbjct: 121 GGQIRQLERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAK 180
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ P RQT+ FSAT PK ++ LA+ FL N ++V ++ I QRV FV + +
Sbjct: 181 NV----PSKRQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPE 236
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQR 442
K S L++ + +VF TK GAD + L + IHG+++Q +
Sbjct: 237 KASLLIEKIRDPELRSA-------IVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQ 288
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 122/301 (40%), Positives = 168/301 (55%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+FA + L EAL I Y +PTPVQ+ AIP + GRDLM AQTG+GKT F PI+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVA--YGGAPI 263
+ + + P L+L PTREL++Q+H E+ K Y +K V A +GG +
Sbjct: 62 RLFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVH-ESFKL-YARDLKFVSACIFGGVGM 119
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
N Q++ + RGVD+LVA PGRL+DL + V L + L LDEADRMLDMGF ++K++
Sbjct: 120 NPQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLA 179
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
++ P RQ +LFSATF +I LA L N + V ++ + I QRV + +
Sbjct: 180 RL----PAKRQNLLFSATFSNDITSLAGKLLHNPERIEVTPPNTTVERIEQRVFRLAANH 235
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ-R 442
KRS L L+ G LVF TK GA+ L +L +G A IHG+++Q R
Sbjct: 236 KRSLLAHLITV-------GAWEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNAR 288
Query: 443 T 443
T
Sbjct: 289 T 289
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 499 (180.7 bits), Expect = 9.8e-47, P = 9.8e-47
Identities = 122/311 (39%), Positives = 175/311 (56%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
++ SG++VP V ++ L + I + +Y KPT +Q A+P+ + GRD++ A+TG
Sbjct: 366 IKVSGKDVPKPVQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTG 425
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT AF P+ I ++ V+ G P+ LIL PTREL+ QI + K F G+
Sbjct: 426 SGKTMAFLLPMFRHIKDQEPVKDNEG-----PIGLILTPTRELAVQIFRDCKPFLKTLGL 480
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARV-SLQMIRYLALDEADRM 309
+ V AYGG PI Q+ +L+RG +I+VAT GR++DLL + RV SL+ Y+ LDEADRM
Sbjct: 481 RAVCAYGGPPIKDQIADLKRGAEIVVATTGRMIDLLAANQGRVVSLRRTTYIVLDEADRM 540
Query: 310 LDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSST 369
DMGFEPQ+ KI + P RQT+LFSAT PK + L L N + + VG
Sbjct: 541 FDMGFEPQVMKIFANV-RPD---RQTVLFSATMPKIMDALVKKVLKNPVEIEVGGKSVVA 596
Query: 370 DLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGF 429
I Q VE E K + L++LL + +L+FVE ++ AD L L G+
Sbjct: 597 SEITQIVEIRDEKSKFNRLLELLGELYKDD---DDVRSLIFVERQEKADELLRELLRKGY 653
Query: 430 PATTIHGDRTQ 440
++HG + Q
Sbjct: 654 GCMSLHGGKDQ 664
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 498 (180.4 bits), Expect = 1.0e-46, P = 1.0e-46
Identities = 118/315 (37%), Positives = 178/315 (56%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD++ A+TG
Sbjct: 241 LRVSGAAPPRPGSSFARFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTG 300
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+F +
Sbjct: 301 SGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHSECKRFGKAYNL 355
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
+ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DEADRM DM
Sbjct: 356 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDM 415
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLI 372
GFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +G + + +
Sbjct: 416 GFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDV 471
Query: 373 VQRVE-FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
Q VE F K + L L ++G L+FV K A+ L + L
Sbjct: 472 TQIVEIFPSGPSKWNWLTRRLVEFTSSGS------VLLFVTKKANAEELANNLKQEDHNL 525
Query: 432 TTIHGDRTQ-QRTSI 445
+HGD Q +R +
Sbjct: 526 GLLHGDMDQSERNKV 540
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 498 (180.4 bits), Expect = 1.0e-46, P = 1.0e-46
Identities = 118/315 (37%), Positives = 178/315 (56%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD++ A+TG
Sbjct: 243 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTG 302
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+F +
Sbjct: 303 SGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHSECKRFGKAYNL 357
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
+ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DEADRM DM
Sbjct: 358 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDM 417
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLI 372
GFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +G + + +
Sbjct: 418 GFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDV 473
Query: 373 VQRVE-FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
Q VE F K + L L ++G L+FV K A+ L + L
Sbjct: 474 TQIVEIFPSGPSKWNWLTRRLVEFTSSGS------VLLFVTKKANAEELANNLKQEDHNL 527
Query: 432 TTIHGDRTQ-QRTSI 445
+HGD Q +R +
Sbjct: 528 GLLHGDMDQSERNKV 542
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 464 (168.4 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 114/283 (40%), Positives = 166/283 (58%)
Query: 159 NIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG 218
+I++ + KPTP+Q A PI + G DL+ AQTG+GKT ++ P G + RG
Sbjct: 238 SIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMP---GFIHLNSQPVSRG 294
Query: 219 SRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILV 278
R P L+L PTREL+ Q+ E K+SY+ G+K V YGG Q++++ +GVDI++
Sbjct: 295 KRNG-PGMLVLTPTRELALQVGAECSKYSYK-GLKSVCIYGGGNRKGQIQDIMKGVDIII 352
Query: 279 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLF 338
ATPGRL DL V+L+ I YL LDEAD+MLD+GFE QI KI+ +D+ P RQT++
Sbjct: 353 ATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKIL--LDVRPD--RQTIMT 408
Query: 339 SATFPKEIQRLASDFLANYIFLAVGRVGS-STDLIVQRVEFVHESDKRSHLMDLLHAQVA 397
SAT+P I++LA +L + + VG + + D + Q + E +KRS + L +
Sbjct: 409 SATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQS--- 465
Query: 398 NGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ K + +VFV K AD L L + G P ++HGDR Q
Sbjct: 466 --LSPKDKV-IVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQ 505
Score = 40 (19.1 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 10/33 (30%), Positives = 12/33 (36%)
Query: 36 PHLRNKPPTSSEPPASSRESTEPASGPRWGSGS 68
P + P S +P AS G W S S
Sbjct: 5 PERKRAEPNSRDPRASQHGRDGRGRGRGWSSTS 37
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 130/354 (36%), Positives = 195/354 (55%)
Query: 98 REREVNPFGDD-VGAEQPVAEEENTGI---NFDAY---EDIPVETSGENVPPAVNTFAEI 150
+E E P V +E V E T + + D Y +I VE S + + +F +
Sbjct: 60 KESEKKPEPTSAVASEFYVQSEALTSLPQSDIDEYFKENEIAVEDSLDLALRPLLSFDYL 119
Query: 151 DLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE 210
L ++ I K+ KPTP+Q A P + G+D++ A+TGSGKT AF P IS +M +
Sbjct: 120 SLDSSIQAEIS--KFPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMND 177
Query: 211 QYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLREL 270
Q + RG + L+++PTREL+SQI+ + + G++ YGG P ++Q +L
Sbjct: 178 Q---KKRGIQV-----LVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQL 229
Query: 271 ERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPP 330
++ ++VATPGRL+DLL+ V L + YL LDEADRML+ GFE I+ I+++ D
Sbjct: 230 KKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDA--- 285
Query: 331 GMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSST--DLIVQRVEFVHESDKRSHL 388
RQT++F+AT+PKE++ LAS F+ N I +++G T I Q VE V K L
Sbjct: 286 SKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKL 345
Query: 389 MDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQR 442
++LL + +G K L+F KK A +E L NG+ IHGD +QQ+
Sbjct: 346 LELLK-KYHSGPK-KNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQ 397
>UNIPROTKB|G5EHR3 [details] [associations]
symbol:MGCH7_ch7g509 "ATP-dependent RNA helicase DED1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM000230
EMBL:CM001237 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 RefSeq:XP_003720990.1 ProteinModelPortal:G5EHR3
EnsemblFungi:MGG_02762T0 GeneID:2682767 KEGG:mgr:MGG_02762
Uniprot:G5EHR3
Length = 619
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 133/361 (36%), Positives = 197/361 (54%)
Query: 108 DVGAEQPVAE--------EENTGINFDAYEDIPVETSGE-NVPPAVNTFAEIDLGEALNL 158
D+G E P E E GI+F +I V G V PA+ F + L A+
Sbjct: 77 DLGPEYPELEKQLFGERGESCAGIDFKVIREIAVVQEGPVRVEPALR-FEDAGLHPAMLK 135
Query: 159 NIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIM-REQYVQRPR 217
N+ C Y PTP+Q + IP G D++ AQTGSGKTAAF P+I+ +M + + + PR
Sbjct: 136 NVDLCGYKVPTPIQAYCIPAIHKGHDVIGIAQTGSGKTAAFLIPVINKLMGKAKKLAAPR 195
Query: 218 GSRTVY-----------PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
+ Y PL +I+ PTREL+ Q EA+K Y++ ++ V YGG Q
Sbjct: 196 PNPVEYNMDIHGPVRAEPLVVIVCPTRELAIQAFNEARKLCYRSMLRPGVVYGGGNFMDQ 255
Query: 267 LRELERGVDILVATPGRLVDLLERARV-SLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
+R++ G DIL ATPGRL+ +++ + +LQ +RY+ +DEAD ML +E ++KI
Sbjct: 256 IRQIGLGCDILCATPGRLLHFMDKPELLNLQRVRYVVIDEADEMLTADWEEDMKKI---- 311
Query: 326 DMPPPGMRQT---MLFSATFPKEIQRLASDFLA-NYIFLAVGRVGSSTDLIVQRVEFVHE 381
M G Q +LFSATFPK+I+ LA + L+ +++ L VGR GS+ I+Q V
Sbjct: 312 -MSAGGAAQEIKYLLFSATFPKKIRDLAREHLSEDHVQLRVGRAGSTHSNIIQTVIETAP 370
Query: 382 SDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMN-GFPATTIHGDRTQ 440
+K+ L DL+ N + ++ T++FV K AD L+ +LY P T++H DRTQ
Sbjct: 371 MNKKRALNDLI-----NSMPPQR--TIIFVNNKWTADELDDYLYNECKLPCTSMHADRTQ 423
Query: 441 Q 441
+
Sbjct: 424 R 424
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 103/219 (47%), Positives = 147/219 (67%)
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P+ L+LAPTREL+ Q+ A ++ +K YGGAP Q+R+LERGV+I +ATPGR
Sbjct: 89 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 148
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
L+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+P
Sbjct: 149 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWP 204
Query: 344 KEIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHG 402
KE+++LA DFL +YI + +G + S+ I+Q V+ H+ +K L+ L+ ++
Sbjct: 205 KEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE---- 260
Query: 403 KQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
K+ T+VFVETK+ D L + +G+PA IHGD++QQ
Sbjct: 261 KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQ 299
>TAIR|locus:2828586 [details] [associations]
symbol:AT3G02065 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003723 EMBL:AC011664 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000006599 OMA:VTRPIID EMBL:AY065172
EMBL:BT001184 IPI:IPI00516794 IPI:IPI00525607 RefSeq:NP_001030621.1
RefSeq:NP_850499.1 RefSeq:NP_974208.1 UniGene:At.41185
UniGene:At.47211 ProteinModelPortal:Q3EBD3 SMR:Q3EBD3 IntAct:Q3EBD3
PaxDb:Q3EBD3 PRIDE:Q3EBD3 EnsemblPlants:AT3G02065.2
EnsemblPlants:AT3G02065.3 GeneID:821155 KEGG:ath:AT3G02065
GeneFarm:1017 TAIR:At3g02065 InParanoid:Q3EBD3 PhylomeDB:Q3EBD3
ProtClustDB:PLN00206 Genevestigator:Q3EBD3 Uniprot:Q3EBD3
Length = 505
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 113/310 (36%), Positives = 167/310 (53%)
Query: 130 DIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACA 189
DI V+ G VPP V TF L L LN+ Y PTP+Q AIP ++ G+ L+A A
Sbjct: 95 DIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASA 154
Query: 190 QTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQ 249
TGSGKTA+F PIIS + + P R PLA++LAPTREL Q+ +AK
Sbjct: 155 DTGSGKTASFLVPIISRCTT-YHSEHPSDQRR-NPLAMVLAPTRELCVQVEDQAKMLGKG 212
Query: 250 TGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRM 309
K + GG P++ QL +++GV++++ TPGR+VDLL + + L I LDE D M
Sbjct: 213 LPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCM 272
Query: 310 LDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSST 369
L GF Q+ +I Q + P Q +LFSAT +E++++ I +++G
Sbjct: 273 LQRGFRDQVMQIFQALSQP-----QVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPN 327
Query: 370 DLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWL-YMNG 428
+ Q +V K+ L D+L +Q N H K +V+V ++ GAD L + + + G
Sbjct: 328 KAVNQLAIWVDAKQKKQKLFDILRSQ--N--HFKPP-AVVYVSSRVGADLLANAITVVTG 382
Query: 429 FPATTIHGDR 438
A +IHG++
Sbjct: 383 VKALSIHGEK 392
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 487 (176.5 bits), Expect = 1.8e-45, P = 1.8e-45
Identities = 118/325 (36%), Positives = 187/325 (57%)
Query: 96 DRREREVNPFGDDVGAE-QPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLG 153
D + E PF + E + ++ +N AY +++ ++ G++VP + + + L
Sbjct: 347 DHSKIEYEPFRKNFYIEVKDISRMTQDAVN--AYRKELELKVHGKDVPRPIQFWHQTGLT 404
Query: 154 EALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYV 213
+ +++ Y KP P+Q A+PI + GRD + A+TGSGKT F P++ I + V
Sbjct: 405 SKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPV 464
Query: 214 QRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERG 273
+ G P+ L++APTREL QI+ + +KFS G+ V YGG+ + QQ+ EL+RG
Sbjct: 465 EAGDG-----PIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRG 519
Query: 274 VDILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPP 330
+I+V TPGR++D+L +++ L+ + YL +DEADRM DMGFEPQI +IVQ + P
Sbjct: 520 TEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNI-RPD- 577
Query: 331 GMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMD 390
RQT+LFSATFP++++ LA L + + VG I Q VE ES++ S L++
Sbjct: 578 --RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEIRPESERFSRLLE 635
Query: 391 LLHAQVANGVHGKQALTLVFVETKK 415
LL G ++ LVFV +++
Sbjct: 636 LL------GEWYEKGKVLVFVRSQE 654
>POMBASE|SPCC63.11 [details] [associations]
symbol:prp28 "U5 snRNP-associated protein Prp28
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
Length = 662
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 108/329 (32%), Positives = 175/329 (53%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
ED + G+++P + + E L + +++ Y +P+ +QR AIP+ + +DL+
Sbjct: 233 EDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGI 292
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY 248
A+TGSGKTAAF P+I I + + + + P A++LAPTREL+ QI VE KF+
Sbjct: 293 AETGSGKTAAFIIPLIIAISKLPPLTE--SNMHLGPYAVVLAPTRELAQQIQVEGNKFAE 350
Query: 249 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 308
G + V GG +Q ++ +G I+VATPGRL+D LER L Y+ +DEADR
Sbjct: 351 PLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADR 410
Query: 309 MLDMGFEPQIRKIVQQMDMP---------------PPGMRQTMLFSATFPKEIQRLASDF 353
MLDMGFE + KI+ + RQT++FSAT P + LA +
Sbjct: 411 MLDMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPRVANLAKSY 470
Query: 354 LANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVET 413
L + L +G +G + D + QRVE + + K+ ++ ++ + ++FV
Sbjct: 471 LIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVE----EILESNRFSPPI-IIFVNL 525
Query: 414 KKGADALEHWLYMNGFPATTIHGDRTQQR 442
K+ +A+ L G+ A T+HG ++Q++
Sbjct: 526 KRNIEAIAKQLNAIGWHAVTLHGSKSQEQ 554
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 483 (175.1 bits), Expect = 3.3e-45, P = 3.3e-45
Identities = 117/319 (36%), Positives = 183/319 (57%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIR-RCKYVKPTPVQRHAIPISIGGRDLMACAQT 191
++ G +VP + ++ + L L+ I + K+ KP+ +Q A+P + GRD++ A+T
Sbjct: 281 IKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKT 340
Query: 192 GSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTG 251
GSGKT ++ P++ I +Q+ + +G P+ LIL+PTREL+ QI E F+ +
Sbjct: 341 GSGKTLSYVLPMLRHIQDQQFSKDNQG-----PIGLILSPTRELALQIEKEILNFTKRNN 395
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARV-SLQMIRYLALDEAD 307
++V YGG+ I Q+ EL++GV+I+V TPGR++DLL RV +L+ ++ LDEAD
Sbjct: 396 NLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEAD 455
Query: 308 RMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGS 367
RM D+GFEPQ+ KI+ Q+ P RQT+LFSATFP++++ LA L + + + VG +
Sbjct: 456 RMFDLGFEPQVNKILTQI-RPD---RQTVLFSATFPRKMETLAKQILTDPVVIIVGGISV 511
Query: 368 STDLIVQRVEF----VHESDK-RSHLMDLLHAQVAN-GVHGKQALTLVFVETKKGADALE 421
I Q V E DK + ++ LH + N + + LVF E + AD L
Sbjct: 512 VAPEIKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDSKILVFTEKQNDADELV 571
Query: 422 HWLYMNGFPATTIHGDRTQ 440
L N +PA IHG + Q
Sbjct: 572 ANLLSNKYPAIAIHGGKDQ 590
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 483 (175.1 bits), Expect = 3.3e-45, P = 3.3e-45
Identities = 117/319 (36%), Positives = 183/319 (57%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIR-RCKYVKPTPVQRHAIPISIGGRDLMACAQT 191
++ G +VP + ++ + L L+ I + K+ KP+ +Q A+P + GRD++ A+T
Sbjct: 281 IKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKT 340
Query: 192 GSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTG 251
GSGKT ++ P++ I +Q+ + +G P+ LIL+PTREL+ QI E F+ +
Sbjct: 341 GSGKTLSYVLPMLRHIQDQQFSKDNQG-----PIGLILSPTRELALQIEKEILNFTKRNN 395
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARV-SLQMIRYLALDEAD 307
++V YGG+ I Q+ EL++GV+I+V TPGR++DLL RV +L+ ++ LDEAD
Sbjct: 396 NLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEAD 455
Query: 308 RMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGS 367
RM D+GFEPQ+ KI+ Q+ P RQT+LFSATFP++++ LA L + + + VG +
Sbjct: 456 RMFDLGFEPQVNKILTQI-RPD---RQTVLFSATFPRKMETLAKQILTDPVVIIVGGISV 511
Query: 368 STDLIVQRVEF----VHESDK-RSHLMDLLHAQVAN-GVHGKQALTLVFVETKKGADALE 421
I Q V E DK + ++ LH + N + + LVF E + AD L
Sbjct: 512 VAPEIKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDSKILVFTEKQNDADELV 571
Query: 422 HWLYMNGFPATTIHGDRTQ 440
L N +PA IHG + Q
Sbjct: 572 ANLLSNKYPAIAIHGGKDQ 590
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 484 (175.4 bits), Expect = 3.6e-45, P = 3.6e-45
Identities = 120/328 (36%), Positives = 192/328 (58%)
Query: 127 AY-EDIP-VETSGENVPPAVNTFAEIDLG-EALNLNIRRCKYVKPTPVQRHAIPISIGGR 183
AY E++ + G + P + T+A+ + + +N+ +++ +Y KPT +Q AIP + GR
Sbjct: 284 AYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNV-LKKFEYSKPTSIQAQAIPSIMSGR 342
Query: 184 DLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEA 243
D++ A+TGSGKT AF P+ I+ + ++ G P+A+ILAPTREL+ Q + EA
Sbjct: 343 DVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDG-----PIAVILAPTRELAMQTYKEA 397
Query: 244 KKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARVS-LQMIRY 300
KF+ G+KV YGG I++Q+ +L+RG +I+V TPGR++D+L +V+ L+ + Y
Sbjct: 398 NKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTY 457
Query: 301 LALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFL 360
L LDEADRM D GFEPQI K+V + P +QT+LFSATFP+ ++ LA L + +
Sbjct: 458 LVLDEADRMFDKGFEPQIMKVVNNI-RPD---KQTVLFSATFPRHMEALARKVLDKPVEI 513
Query: 361 AVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADAL 420
VG I Q E K L++LL G++ ++ ++VFV+ ++ AD +
Sbjct: 514 LVGGKSVVCSDITQNAVICAEHQKFLKLLELL------GMYYEEGSSIVFVDKQEKADDI 567
Query: 421 EHWLYMNGFPATT-IHG--DRTQQRTSI 445
L G+ + +HG D+ + +SI
Sbjct: 568 VDQLMRTGYNSVAPLHGGIDQHDRDSSI 595
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 121/358 (33%), Positives = 195/358 (54%)
Query: 98 REREVNPFGDDVGAEQPVAEE------ENTGINFDAYEDIPVETSGEN---VPPAVNTFA 148
++RE+N + D++ P+ + E+ D ++ + EN +P ++T
Sbjct: 85 KKREIN-WDDELKNMAPIRKRLIDLPTEDQQETMDFIKEFEISIKKENNFYLPKPIDTIE 143
Query: 149 EIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIM 208
+ + N K+ KPTPVQ PI++ G D++ ++TGSGKT +F P I I+
Sbjct: 144 SVPFQSTIK-NFLSKKFEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSFILPAIEHIL 202
Query: 209 REQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLR 268
+ PR S P L++APTREL++QI+ EA+++ +++ YGGAP Q
Sbjct: 203 AQ-----PRQSYYPGPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRSQQL 257
Query: 269 ELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMP 328
+L R I+V TPGR++D +E +SL+ I +L +DEADR+++MGFE QI I + P
Sbjct: 258 QLSRRPKIVVGTPGRIIDFMESGDLSLKNISFLVVDEADRLMEMGFEQQIDGIFNSI-RP 316
Query: 329 PPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDL-IVQRVEFVH-ESDKRS 386
RQ + +SAT+PK++ A + I L +G + + I Q+ + V ++DK
Sbjct: 317 D---RQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKIVPTDADKVD 373
Query: 387 HLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNG--FPATTIHGDRTQQR 442
LMD L ++ + ++A TL+F TKKGAD L+H++ NG T+HGD Q R
Sbjct: 374 ALMDTL-GEIYSA--DEKAQTLIFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVDQNR 428
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 123/328 (37%), Positives = 179/328 (54%)
Query: 118 EENTGINFDAYEDIPVETSGEN--VPPAVNTFAE-IDLGEALNLNIRRCKYVKPTPVQRH 174
+EN I +D +D GE +P TF + + NI++ + KPTP+Q
Sbjct: 218 KENFNITWDDLKD------GEKRPIPNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQ 271
Query: 175 AIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRE 234
A PI + G DL+ AQTG+GKT + P G + +G R P L+L PTRE
Sbjct: 272 AWPIVLQGIDLIGVAQTGTGKTLCYLMP---GFIHLVLQPSLKGQRN-RPGMLVLTPTRE 327
Query: 235 LSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVS 294
L+ Q+ E K+SY+ G++ V YGG ++Q+ EL++GVDI++ATPGRL DL V+
Sbjct: 328 LALQVEGECCKYSYK-GLRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVN 386
Query: 295 LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFL 354
L+ I YL LDEAD+MLDMGFEPQI KI+ +D+ P RQT++ SAT+P + RLA +L
Sbjct: 387 LKNITYLVLDEADKMLDMGFEPQIMKIL--LDVRPD--RQTVMTSATWPHSVHRLAQSYL 442
Query: 355 ANYIFLAVGRVGS-STDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVET 413
+ + VG + + + Q + E +K SH+ L + + +VFV
Sbjct: 443 KEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSSTDK------VIVFVSR 496
Query: 414 KKGADALEHWLYMNGFPATTIHGDRTQQ 441
K AD L L + ++HGDR Q+
Sbjct: 497 KAVADHLSSDLILGNISVESLHGDREQR 524
>MGI|MGI:1915247 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915247
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 GO:GO:0005622
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
GeneTree:ENSGT00610000086076 CTD:83479 HOGENOM:HOG000006599
HOVERGEN:HBG106120 OMA:VTRPIID EMBL:AK004833 EMBL:AK013179
EMBL:AK076462 EMBL:BC023840 IPI:IPI00119928 IPI:IPI00226119
RefSeq:NP_080776.1 UniGene:Mm.385462 UniGene:Mm.486546
ProteinModelPortal:Q9DBN9 SMR:Q9DBN9 PhosphoSite:Q9DBN9
PRIDE:Q9DBN9 Ensembl:ENSMUST00000027655 GeneID:67997 KEGG:mmu:67997
UCSC:uc007cut.1 UCSC:uc007cuu.2 InParanoid:Q9DBN9 OrthoDB:EOG4K9BBZ
ChiTaRS:DDX59 NextBio:326168 Bgee:Q9DBN9 CleanEx:MM_DDX59
Genevestigator:Q9DBN9 Uniprot:Q9DBN9
Length = 619
Score = 450 (163.5 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 113/320 (35%), Positives = 176/320 (55%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
+ + + G++V + F E LN N+++ Y PTP+Q IP+ + GRD++A
Sbjct: 187 QQLGISVQGQDVARPIIDFEHCGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILAS 246
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKF-S 247
A TGSGKTAAF P+I E +T P ALIL PTREL+ QI +AK+ S
Sbjct: 247 ADTGSGKTAAFLLPVIIRAFSED--------KT--PSALILTPTRELAIQIERQAKELMS 296
Query: 248 YQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEAD 307
+K V+ GG P+ QL L + V +++ATPGRL+D+++++ VSL I+ + +DEAD
Sbjct: 297 GLPRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSVSLSGIKIVVVDEAD 356
Query: 308 RMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGS 367
ML MGF+ Q+ +++ PG QT+L SAT P I++L L N + + G
Sbjct: 357 TMLKMGFQQQVLDVLEHT----PGDCQTILVSATIPDSIEQLTDQLLHNPVRIITGDKNL 412
Query: 368 STDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY-M 426
+ Q + +V + K+ L ++L+ Q + LVFV+ K GAD L + +
Sbjct: 413 PCASVRQIILWVEDPAKKKKLFEILNDQKLF-----KPPVLVFVDCKLGADLLSEAVQKI 467
Query: 427 NGFPATTIHGDRTQ-QRTSI 445
G +T+IH +++Q +R I
Sbjct: 468 TGLNSTSIHSEKSQVERRDI 487
Score = 38 (18.4 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 107 DDV-GAEQPVAEEENTGINFDAYEDIPVETS 136
DD+ E ++ E G+ + D PV TS
Sbjct: 15 DDLKSGEAKKSKPEAGGLQVEGDRDTPVHTS 45
>UNIPROTKB|F1NVJ6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
Length = 642
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 114/303 (37%), Positives = 178/303 (58%)
Query: 140 VPPAVNTFAEI-DLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAA 198
+P V F ++ + + NIR+ + KPTP+Q A PI + G DL+ AQTG+GKT A
Sbjct: 234 IPNPVCKFEDVFEQYPDIMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLA 293
Query: 199 FCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAY 258
+ P + + + RG P L+LAPTREL+ Q+ E K++Y+ G K + Y
Sbjct: 294 YLMPGFIHLASQPIPKDKRGG----PGMLVLAPTRELALQVEAECLKYTYK-GFKSICIY 348
Query: 259 GGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQI 318
GG Q+ + +GVDI++ATPGRL DL ++L+ I YLA +EADRMLDMGFEPQI
Sbjct: 349 GGGDRKAQINVVTKGVDIVIATPGRLNDLQMNNFINLKSITYLA-NEADRMLDMGFEPQI 407
Query: 319 RKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVE 377
KI+ +D+ P RQT++ SAT+P ++RLA +L N + + VG + ++ + + Q+V
Sbjct: 408 MKIL--IDVRPD--RQTVMMSATWPDGVRRLAKSYLRNPMIVYVGTLDLAAVNTVEQKVI 463
Query: 378 FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGD 437
++E +K++ + + + + + K ++FV K AD + L + G P ++HGD
Sbjct: 464 VINEEEKKAFMENFI-----DSMKPKDK-AIIFVGKKSTADDIASDLGVQGVPVQSLHGD 517
Query: 438 RTQ 440
R Q
Sbjct: 518 REQ 520
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 113/295 (38%), Positives = 176/295 (59%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TF+++ L L + PTP+Q+ AIP + G+D++A AQTG+GKTAAF P+I
Sbjct: 7 TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
+ EQ QR S+ + AL+L PTREL+ Q+ + ++ T +K+V YGG +
Sbjct: 67 RFI-EQPWQREANSKEIR--ALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKV 123
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
QL L GVDIL+ATPGRL+D + L + L LDEADRMLDMGF P ++++++++
Sbjct: 124 QLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRL 183
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P +RQT+ FSATF +I+ +A + + I + V S+ + + Q V V + KR
Sbjct: 184 S-P---LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKR 239
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
L L+ ++ + +Q L VF +T++G+DAL L ++G A +I+GD++Q
Sbjct: 240 ELLSYLIGSK-----NWQQVL--VFTKTRQGSDALAEELKLDGIKAVSINGDKSQ 287
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 113/295 (38%), Positives = 176/295 (59%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TF+++ L L + PTP+Q+ AIP + G+D++A AQTG+GKTAAF P+I
Sbjct: 7 TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
+ EQ QR S+ + AL+L PTREL+ Q+ + ++ T +K+V YGG +
Sbjct: 67 RFI-EQPWQREANSKEIR--ALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKV 123
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
QL L GVDIL+ATPGRL+D + L + L LDEADRMLDMGF P ++++++++
Sbjct: 124 QLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRL 183
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P +RQT+ FSATF +I+ +A + + I + V S+ + + Q V V + KR
Sbjct: 184 S-P---LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKR 239
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
L L+ ++ + +Q L VF +T++G+DAL L ++G A +I+GD++Q
Sbjct: 240 ELLSYLIGSK-----NWQQVL--VFTKTRQGSDALAEELKLDGIKAVSINGDKSQ 287
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 112/278 (40%), Positives = 167/278 (60%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 166
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPIN-QQLRELERGVDILVATPGR 283
+ +L L S ++ F ++ V + G + Q+L L + V+I +ATPGR
Sbjct: 167 IVSVLPFFSTLFS-VYRGGTDFKFKCSSLFWVCFLGQSLKGQRLEWLSQCVEICIATPGR 225
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+P
Sbjct: 226 -IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWP 280
Query: 344 KEIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHG 402
KE+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A
Sbjct: 281 KEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE---- 336
Query: 403 KQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
K+ T++FVETK+ D L + +G+PA IHGD++Q
Sbjct: 337 KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQ 374
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 468 (169.8 bits), Expect = 2.0e-44, P = 2.0e-44
Identities = 110/327 (33%), Positives = 185/327 (56%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVK-PTPVQRHAIPISIGGRDLMA 187
+ + + T GE++PP + TF E+ + + + +++ K +K P+P+Q +P+ + GRD++
Sbjct: 206 DQLNIITDGEDIPPPITTFKEMKIPKPV-IDVLLEKGIKKPSPIQVQGLPVILSGRDMIG 264
Query: 188 CAQTGSGKTAAFCFPIISGIMREQYVQRP--RGSRTVYPLALILAPTRELSSQIHVEAKK 245
A TGSGKT F P++ + E+ + P +G P LIL P+REL+ Q +
Sbjct: 265 IAYTGSGKTLVFTLPMVLFALEEE-CKLPIIQGEG---PFGLILCPSRELARQTYDLVNS 320
Query: 246 FS---YQTG----VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMI 298
F+ ++ G ++ ++A GG + +Q ++GV +++ATPGRL+DLL + +++ ++
Sbjct: 321 FTNALHKNGGHPQLRTLLAIGGIDLREQEHIFKKGVHMIIATPGRLLDLLNKKKINFKLC 380
Query: 299 RYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYI 358
+YL LDEADR++D+GFE IR ++ RQT+LFSAT PK+IQ A L +
Sbjct: 381 KYLGLDEADRLIDLGFEDDIRSVLDNFT----NQRQTLLFSATMPKKIQEFARSALVLPV 436
Query: 359 FLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGAD 418
+ VGR G++ + Q VEFV K +L++ L L+F E KK D
Sbjct: 437 EVNVGRAGAANLNVTQEVEFVKPEAKIVYLLECLQKTPPP--------VLIFCENKKDVD 488
Query: 419 ALEHWLYMNGFPATTIHGDRTQ-QRTS 444
+ +L + A +IHGD++Q +R S
Sbjct: 489 DIYEYLLLKQVEAVSIHGDKSQDERES 515
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 112/323 (34%), Positives = 180/323 (55%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCK-YVKPTPVQRHAIPISIGGRDLMACAQT 191
+ G+++PP + +F E+ ++L +++ K V PT +Q IP+++ GRD++ A T
Sbjct: 177 ISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIAST 236
Query: 192 GSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH---VEAKKFSY 248
GSGKT F P++ + EQ ++ P R+ P LI+ P+REL+ QI +E
Sbjct: 237 GSGKTMTFVLPLVMFCL-EQEMKLPF-MRSEGPFGLIIVPSRELARQIFDLIIEMFDALG 294
Query: 249 QTGV---KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 305
+ G+ + + GG PI +Q +++ G+ I+VATPGRL D+L + ++L++ RYL LDE
Sbjct: 295 KAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDE 354
Query: 306 ADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRV 365
ADRMLDMGFE +I+ I RQT+LFSAT P++IQ A L I + VGR
Sbjct: 355 ADRMLDMGFEDEIKSIFYFFK----AQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRA 410
Query: 366 GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY 425
G+++ ++Q +EFV +K +++ L L+F E K D + +L
Sbjct: 411 GAASLNVLQELEFVRSENKLVRVLECLQKTSPK--------VLIFAEKKVDVDNIYEYLL 462
Query: 426 MNGFPATTIHG--DRTQQRTSIE 446
+ G +IHG D++ + IE
Sbjct: 463 VKGVEVASIHGGKDQSDRHAGIE 485
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 111/283 (39%), Positives = 164/283 (57%)
Query: 159 NIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG 218
NI + + KPTP+Q A PI + G DL+ AQTG+GKT ++ P I + +QR R
Sbjct: 255 NIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHIDSQPVLQRARN 314
Query: 219 SRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILV 278
P L+L PTREL+ Q+ E ++SY+ G+K V YGG + Q+++L +G DI++
Sbjct: 315 G----PGMLVLTPTRELALQVDAECSEYSYR-GLKSVCIYGGGDRDGQIKDLSKGADIII 369
Query: 279 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLF 338
ATPGRL DL V L+ I YL LDEAD+MLDMGFEPQI KI+ +D+ P RQT++
Sbjct: 370 ATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKIL--LDVRPD--RQTVMT 425
Query: 339 SATFPKEIQRLASDFLANYIFLAVGRVGS-STDLIVQRVEFVHESDKRSHLMDLLHAQVA 397
SAT+P ++RLA +L + + VG + + + Q + E +KRSH+ +
Sbjct: 426 SATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNIIVTTEDEKRSHIQAFI----- 480
Query: 398 NGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ + K + ++FV K AD L L + ++HG+R Q
Sbjct: 481 DSMSPKDKV-IIFVSRKAVADHLSSDLGIRRISVESLHGNREQ 522
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 126/355 (35%), Positives = 194/355 (54%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSG--ENVPPAVNTFAEIDLG 153
+ +E E N D + E E+ G + + V G E A+ TFAE +L
Sbjct: 68 EEKESEKNKKKD---VPEKKLEAEDLGEGESEQQKVVVTGKGVEEAKYAALKTFAESNLP 124
Query: 154 EALNLNIRRCK-YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQY 212
E N+ + CK + KP+P+Q H P + GRDL+ A+TGSGKT AF P I ++++
Sbjct: 125 E--NV-LDCCKTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNK 181
Query: 213 VQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELER 272
+ GS+ V P L+L+PTREL+ QI ++ G+K + YGG+ Q+ +
Sbjct: 182 -KIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRS 240
Query: 273 GVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGM 332
GVDI++ TPGRL DL+E + L + ++ LDEADRMLDMGFE +R I+ + +
Sbjct: 241 GVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNK----V 296
Query: 333 RQTMLFSATFPKEIQRLASDFL-ANYIFLAVGRVGSSTDL-IVQRVEFVHESDKRSHLMD 390
RQ ++FSAT+P ++ +LA +F+ N I + +G V + + ++Q +E + E + L+
Sbjct: 297 RQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIA 356
Query: 391 LLHAQVANGVHGKQA-LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QRT 443
LL H Q LVF K A+ LE +L G+ A +IHG++ Q +RT
Sbjct: 357 LLEKY-----HKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERT 406
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 110/284 (38%), Positives = 165/284 (58%)
Query: 158 LNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR 217
+NI++ + KPTP+Q A PI + G DL+ AQTG+GKT ++ P + + V +
Sbjct: 254 INIKKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHVDSQPVVFSLQ 313
Query: 218 GSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDIL 277
+R P L+L PTREL+ Q+ E K+SY+ G+K V YGG + Q+++L +GVDI+
Sbjct: 314 RARNG-PGMLVLTPTRELALQVEAECSKYSYK-GLKSVCVYGGGDRDGQIKDLLKGVDII 371
Query: 278 VATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTML 337
+ATPGRL DL V L+ I YL LDEAD+MLDMGFEPQI KI+ +D+ P RQT++
Sbjct: 372 IATPGRLNDLQMNNFVYLKSISYLVLDEADKMLDMGFEPQIMKIL--LDIRPD--RQTVM 427
Query: 338 FSATFPKEIQRLASDFLANYIFLAVGRVGS-STDLIVQRVEFVHESDKRSHLMDLLHAQV 396
SAT+P ++RLA +L + + VG + + + Q + E +KRSH+ + +
Sbjct: 428 TSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIVTTEDEKRSHIQTFIESM- 486
Query: 397 ANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ ++FV K AD L L + ++HG+R Q
Sbjct: 487 -----SPKDKVIIFVSRKAVADHLSSDLGIRHISVESLHGNREQ 525
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 114/283 (40%), Positives = 166/283 (58%)
Query: 159 NIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG 218
+I++ + KPTP+Q A PI + G DL+ AQTG+GKT ++ P G + RG
Sbjct: 229 SIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMP---GFIHLNSQPVSRG 285
Query: 219 SRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILV 278
R P L+L PTREL+ Q+ E K+SY+ G+K V YGG Q++++ +GVDI++
Sbjct: 286 KRNG-PGMLVLTPTRELALQVGAECSKYSYK-GLKSVCIYGGGNRKGQIQDIMKGVDIII 343
Query: 279 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLF 338
ATPGRL DL V+L+ I YL LDEAD+MLD+GFE QI KI+ +D+ P RQT++
Sbjct: 344 ATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKIL--LDVRPD--RQTIMT 399
Query: 339 SATFPKEIQRLASDFLANYIFLAVGRVGS-STDLIVQRVEFVHESDKRSHLMDLLHAQVA 397
SAT+P I++LA +L + + VG + + D + Q + E +KRS + L +
Sbjct: 400 SATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQS--- 456
Query: 398 NGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ K + +VFV K AD L L + G P ++HGDR Q
Sbjct: 457 --LSPKDKV-IVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQ 496
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 107/281 (38%), Positives = 162/281 (57%)
Query: 160 IRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGS 219
I C Y K TP+Q+ AIP G+D++A AQTG+GKTAAF PI+ ++ V+ P +
Sbjct: 16 ISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPIL-----QKMVENPSET 70
Query: 220 RTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 279
LIL PTREL++Q+ + +S V+ YGG + Q ++L+RG DI+VA
Sbjct: 71 LKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLKRGADIIVA 130
Query: 280 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFS 339
TPGRL++ L +SL + +L LDEADRMLDMGF I+KI+Q ++ RQ +LFS
Sbjct: 131 TPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKK----RQNLLFS 186
Query: 340 ATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANG 399
ATF +++LA++ + ++ + ++ D + Q V V + KR L +L+ G
Sbjct: 187 ATFSSAVKKLANEMMIKPQVISADKQNTTADTVSQVVYPVEQRRKRELLSELI------G 240
Query: 400 VHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
Q + LVF T+ AD L L ++G P+ +HG++ Q
Sbjct: 241 KKNWQQV-LVFTATRDAADTLVKELNLDGIPSEVVHGEKAQ 280
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 119/303 (39%), Positives = 172/303 (56%)
Query: 140 VPPAVNTFAEI-DLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAA 198
+P V F ++ + + NIR+ + KPTP+Q A PI + G DL+ AQTG+GKT A
Sbjct: 47 IPNPVCKFEDVFEQYPDIMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLA 106
Query: 199 FCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAY 258
+ P + + + RG P L+LAPTREL+ Q+ E K++Y+ G K + Y
Sbjct: 107 YLMPGFIHLASQPIPKDKRGG----PGMLVLAPTRELALQVEAECLKYTYK-GFKSICIY 161
Query: 259 GGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQI 318
GG Q+ + +GVDI++ATPGRL DL ++L+ I YL LDEADRMLDMGFEPQI
Sbjct: 162 GGGDRKAQINVVTKGVDIVIATPGRLNDLQMNNFINLKSITYLVLDEADRMLDMGFEPQI 221
Query: 319 RKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEF 378
KI+ +D+ P RQT++ SAT+P ++RLA +L N + + VG + DL V V
Sbjct: 222 MKIL--IDVRPD--RQTVMMSATWPDGVRRLAKSYLRNPMIVYVGTL----DLAVSGVVL 273
Query: 379 VH-ESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGD 437
+ + DK + + QV N + +VFV+ AD + L + G P ++HGD
Sbjct: 274 KYLQFDK--DIFTWKYMQV-NAQSFCTDVVVVFVQLHVVADDIASDLGVQGVPVQSLHGD 330
Query: 438 RTQ 440
R Q
Sbjct: 331 REQ 333
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 111/301 (36%), Positives = 164/301 (54%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TF E+ L L + +Y +PTP+Q AIP GRDL+A A TGSGKTA F P++
Sbjct: 9 TFTELGLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLIAGANTGSGKTATFALPMLQ 68
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFS--YQTGVKVVVAYGGAPI 263
+ RE + S+ + L+L PTREL+ Q+ K ++ + +K + +GG +
Sbjct: 69 KL-REDISSGSKNSKGNFVTGLVLVPTRELAKQVADSIKSYAVHFNGEIKTLAVFGGVSV 127
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
N Q+ L GVDILVATPGRL+DL+ + L ++ L LDEADRML +GF ++ ++
Sbjct: 128 NIQMLALRGGVDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELTALLA 187
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
P +QT+LFSATFP+++ L + L N I + + +ST +VQRV V++ +
Sbjct: 188 LT----PKKKQTLLFSATFPEQVTTLTQELLNNPIEIQLQSADAST--LVQRVFTVNKGE 241
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQRT 443
K + L L+ + +QAL +FV K + L L G A HGD+ Q
Sbjct: 242 KTAVLAHLIQQE-----QWRQAL--IFVNAKHHCEHLAEKLAKRGITAAVFHGDKGQSER 294
Query: 444 S 444
S
Sbjct: 295 S 295
>CGD|CAL0001091 [details] [associations]
symbol:orf19.672 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116 RefSeq:XP_713805.1
RefSeq:XP_713845.1 ProteinModelPortal:Q59W52 GeneID:3644491
GeneID:3644552 KEGG:cal:CaO19.672 KEGG:cal:CaO19.8289
Uniprot:Q59W52
Length = 581
Score = 441 (160.3 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 114/340 (33%), Positives = 183/340 (53%)
Query: 118 EENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAI 176
EE T ++ + ED + T G+N+P + + E + + L I + Y +PT VQR +I
Sbjct: 140 EEMTDRDWRIFKEDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASI 199
Query: 177 PISIGGRDLMACAQTGSGKTAAFCFPIISGIMR--EQYVQRPRGSRTVYPLALILAPTRE 234
P+++ RD++ A+TGSGKT AF P+++ I+ E Y++ + S P+ LILAPTRE
Sbjct: 200 PLALKKRDVVGVAETGSGKTLAFLIPVLNYILSIDENYLKYEKISNE--PVGLILAPTRE 257
Query: 235 LSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELER-GVDILVATPGRLVDLLERARV 293
L+ QI EA+KF + G +V+ GG + ++++ GV ++VATPGRLVD +ER V
Sbjct: 258 LALQITKEAEKFCKKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSIERKIV 317
Query: 294 SLQMIRYLALDEADRMLDMGFEPQIRKIV------QQMDMPPPGM------RQTMLFSAT 341
L L +DEADRM+DMGFE + K++ +Q+ G R TM+F+AT
Sbjct: 318 DLSKCYCLVMDEADRMIDMGFEKDLNKVLDKLPTEKQLSSTIDGRIFHLEKRSTMMFTAT 377
Query: 342 FPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVH 401
+++L +L + +L +G G + D I Q EF+ + + + L + +
Sbjct: 378 ISPTVEKLTKKYLIDPGYLYIGGAGEALDNISQSFEFLSSATTEATKFNKLIKIIRSHWR 437
Query: 402 -GKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ L ++F K D+L L N IHG ++Q
Sbjct: 438 VTENPLIIIFANFKHVCDSLSQELSSNDINNVVIHGSKSQ 477
Score = 38 (18.4 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 414 KKGADALEHWLY 425
KKG L WLY
Sbjct: 561 KKGGKRLPDWLY 572
>UNIPROTKB|Q59W52 [details] [associations]
symbol:PRP28 "Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28" species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116
RefSeq:XP_713805.1 RefSeq:XP_713845.1 ProteinModelPortal:Q59W52
GeneID:3644491 GeneID:3644552 KEGG:cal:CaO19.672
KEGG:cal:CaO19.8289 Uniprot:Q59W52
Length = 581
Score = 441 (160.3 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 114/340 (33%), Positives = 183/340 (53%)
Query: 118 EENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAI 176
EE T ++ + ED + T G+N+P + + E + + L I + Y +PT VQR +I
Sbjct: 140 EEMTDRDWRIFKEDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASI 199
Query: 177 PISIGGRDLMACAQTGSGKTAAFCFPIISGIMR--EQYVQRPRGSRTVYPLALILAPTRE 234
P+++ RD++ A+TGSGKT AF P+++ I+ E Y++ + S P+ LILAPTRE
Sbjct: 200 PLALKKRDVVGVAETGSGKTLAFLIPVLNYILSIDENYLKYEKISNE--PVGLILAPTRE 257
Query: 235 LSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELER-GVDILVATPGRLVDLLERARV 293
L+ QI EA+KF + G +V+ GG + ++++ GV ++VATPGRLVD +ER V
Sbjct: 258 LALQITKEAEKFCKKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSIERKIV 317
Query: 294 SLQMIRYLALDEADRMLDMGFEPQIRKIV------QQMDMPPPGM------RQTMLFSAT 341
L L +DEADRM+DMGFE + K++ +Q+ G R TM+F+AT
Sbjct: 318 DLSKCYCLVMDEADRMIDMGFEKDLNKVLDKLPTEKQLSSTIDGRIFHLEKRSTMMFTAT 377
Query: 342 FPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVH 401
+++L +L + +L +G G + D I Q EF+ + + + L + +
Sbjct: 378 ISPTVEKLTKKYLIDPGYLYIGGAGEALDNISQSFEFLSSATTEATKFNKLIKIIRSHWR 437
Query: 402 -GKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ L ++F K D+L L N IHG ++Q
Sbjct: 438 VTENPLIIIFANFKHVCDSLSQELSSNDINNVVIHGSKSQ 477
Score = 38 (18.4 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 414 KKGADALEHWLY 425
KKG L WLY
Sbjct: 561 KKGGKRLPDWLY 572
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 116/294 (39%), Positives = 162/294 (55%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
F ++ L EAL +R Y P+P+Q AIP I GRD+MA AQTG+GKTA F P++
Sbjct: 8 FTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLLQR 67
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
+ + S V ALIL PTREL++QI + + + +V +GG IN Q
Sbjct: 68 LSSSK--GNKVSSNNVR--ALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQ 123
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
+ L +GVD+LVATPGRL+DL + V + LDEADRMLDMGF I+K++ +
Sbjct: 124 IARLRQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTAL- 182
Query: 327 MPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRS 386
P RQ +LFSATF EI+ LA + N + ++V S+ + + Q + V DK+
Sbjct: 183 ---PKDRQNLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAEKVTQWLTAV---DKKR 236
Query: 387 HLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
L H N + +Q L VF +TK GA+ L L G A IHG+++Q
Sbjct: 237 KPAVLTHLIKEN--NWQQVL--VFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQ 286
>DICTYBASE|DDB_G0277857 [details] [associations]
symbol:helB2 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
OMA:DRYRDND Uniprot:Q54Y81
Length = 834
Score = 469 (170.2 bits), Expect = 8.8e-44, P = 8.8e-44
Identities = 115/332 (34%), Positives = 173/332 (52%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
ED + T G P + T+ E +L + IR+ Y KP+P+Q +IPIS+ GRD++
Sbjct: 397 EDFNISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGI 456
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY 248
A+TGSGKT AF P++ I ++ + + + P AL++APTREL QI E + F+
Sbjct: 457 AETGSGKTCAFVIPMLIYISKQPRLTKD--TEADGPYALVMAPTRELVQQIEKETRNFAQ 514
Query: 249 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 308
G +VV GG I Q ++ +G +I++ATPGRL D LE+ + L Y+ LDEAD
Sbjct: 515 HFGFRVVSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADM 574
Query: 309 MLDMGFEPQIRKIVQQM----------DMPPPG-------MRQTMLFSATFPKEIQRLAS 351
M+D+GFEPQ+ ++ M +M R T+LFSAT P +++L+
Sbjct: 575 MIDLGFEPQVTSVLDAMPSSFLKSEDDEMAEKQESDRSHIYRTTILFSATMPPLVEKLSK 634
Query: 352 DFLANYIFLAVGRVGSSTDLIVQRVEFVH-ESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+L + +G G D I Q V FV E+DK+ HL L+ G ++F
Sbjct: 635 KYLRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEHLTQLIK-------DGPPPPIIIF 687
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQR 442
V KK D + L T +H R+Q++
Sbjct: 688 VNKKKHCDIIAPVLEECRVSYTILHSGRSQEQ 719
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 115/295 (38%), Positives = 165/295 (55%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TF+ L L I Y +PT +Q+ +IP+ + D+MA AQTG+GKTAAF PI+
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
++ Q +P R AL+L PTREL+ Q+H + T V + +AYGG +
Sbjct: 66 QLISVQPC-KPE-LR-----ALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKK 118
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q+ EL+ GVDIL+ATPGRL+DLL VSL I L DEADRMLDMGF+ +I +I Q +
Sbjct: 119 QISELKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYL 178
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P +QT+LFSATF +I +++ + L + + + D + Q V V ++D++
Sbjct: 179 ----PKTKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGV-DADRK 233
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
L L + KQ L VF TK+ AD L + +G + IHGD++Q
Sbjct: 234 RELTSFL----IGSRNWKQVL--VFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQ 282
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 115/295 (38%), Positives = 165/295 (55%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TF+ L L I Y +PT +Q+ +IP+ + D+MA AQTG+GKTAAF PI+
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
++ Q +P R AL+L PTREL+ Q+H + T V + +AYGG +
Sbjct: 66 QLISVQPC-KPE-LR-----ALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKK 118
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q+ EL+ GVDIL+ATPGRL+DLL VSL I L DEADRMLDMGF+ +I +I Q +
Sbjct: 119 QISELKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYL 178
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P +QT+LFSATF +I +++ + L + + + D + Q V V ++D++
Sbjct: 179 ----PKTKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGV-DADRK 233
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
L L + KQ L VF TK+ AD L + +G + IHGD++Q
Sbjct: 234 RELTSFL----IGSRNWKQVL--VFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQ 282
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 123/335 (36%), Positives = 185/335 (55%)
Query: 111 AEQPVAEEENTGINFDAYEDIPVETSGEN--VPPAVNTFAEI--DLGEALNLNIRRCKYV 166
A+ + +EN I D D+ T GE +P TF + E + +IRR +
Sbjct: 170 AQVEIWRKENFNIRCD---DL---TEGEKRPIPKPTCTFEDAFQQYPEIMQ-SIRRAGFQ 222
Query: 167 KPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLA 226
KPTP+Q + PI + G DL+ AQTG+GKT ++ P I + ++ R P
Sbjct: 223 KPTPIQSQSWPIILQGIDLIGIAQTGTGKTLSYLMPGFIHIHSQPVSRKQRNG----PGM 278
Query: 227 LILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVD 286
L+L PTREL+ Q+ E K+ Y+ G+K V YGG Q++++ +GVDI++ATPGRL D
Sbjct: 279 LVLTPTRELALQVEAECSKYLYK-GLKSVCIYGGGNRKGQIQDVTKGVDIIIATPGRLND 337
Query: 287 LLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEI 346
L V+L+ I YL LDEAD+MLD+GFE QI KI+ +D+ P RQT++ +A++P
Sbjct: 338 LQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKIL--LDVRPD--RQTVMTTASWPDST 393
Query: 347 QRLASDFLANYIFLAVGRVGSST-DLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQA 405
+RLA +L + + VG + T + + Q + E +KRS + + L + + K
Sbjct: 394 RRLAQSYLKQPMIVYVGTLDLVTVNTVKQNIIVTTEEEKRSLVKEFLQS-----LSPKDK 448
Query: 406 LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ +VFV K AD L L + G P ++HGDR Q
Sbjct: 449 V-IVFVSRKLVADDLSSDLSIQGIPVQSLHGDREQ 482
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 105/312 (33%), Positives = 173/312 (55%)
Query: 136 SGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGK 195
+G+++PP + F ++ + ++ V+PTP+Q +P+ + GRD++ A TGSGK
Sbjct: 137 NGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGK 196
Query: 196 TAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFS---YQTG- 251
T F P+I ++E+ + P+ LI+ P+REL+ Q + ++F + G
Sbjct: 197 TLVFVLPMIMIALQEEMMMPIAAGEG--PIGLIVCPSRELARQTYEVVEQFVAPLVEAGY 254
Query: 252 --VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRM 309
++ ++ GG + QL ++RGV I+VATPGRL D+L + ++SL RYL LDEADR+
Sbjct: 255 PPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRL 314
Query: 310 LDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSST 369
+D+GFE IR++ RQT+LFSAT P +IQ A L + + VGR G++
Sbjct: 315 VDLGFEDDIREVFDHFK----SQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAAN 370
Query: 370 DLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGF 429
++Q VE+V + K +L++ L + + V L+F E K D + +L + G
Sbjct: 371 LDVIQEVEYVKQEAKIVYLLECLQ-KTSPPV-------LIFCENKADVDDIHEYLLLKGV 422
Query: 430 PATTIHGDRTQQ 441
A IHG + Q+
Sbjct: 423 EAVAIHGGKDQE 434
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 115/319 (36%), Positives = 182/319 (57%)
Query: 130 DIPVET-SGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
+I VE S ++ P ++ F ++ L A+ + K+ KPTP+Q + P + G+D++
Sbjct: 140 EITVEDPSSSSLRPILS-FDQVQLTSAITSKLS--KFDKPTPIQSVSWPFLLSGKDVIGV 196
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY 248
A+TGSGKT AF P I+ I+ ++T+ L ++PTREL+ QI+ + +
Sbjct: 197 AETGSGKTFAFGVPAINNIITTG------NTKTLS--VLCISPTRELALQIYDNLIELTA 248
Query: 249 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 308
+GV V YGG + Q+R+++ +++VATPGRLVDL+ ++L + YL LDEADR
Sbjct: 249 DSGVNCVAVYGGVSKDDQIRKIKTA-NVVVATPGRLVDLINDGAINLGKVNYLVLDEADR 307
Query: 309 MLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-- 366
ML+ GFE I+ I+ RQT++F+AT+PKE++ LA++F+ + + + VG
Sbjct: 308 MLEKGFEEDIKTIISNTSNSE---RQTLMFTATWPKEVRELANNFMNSPVKVTVGDRDEL 364
Query: 367 SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYM 426
S+ I Q VE +++ DK L+ LL AN L+F KK A +E++L
Sbjct: 365 SANKRITQVVEVINKFDKEKKLIQLLRKYNAN--ESSDNKILIFALYKKEASRIENFLKR 422
Query: 427 NGFPATTIHGDRTQQ-RTS 444
N F IHGD +QQ RT+
Sbjct: 423 NRFSVAAIHGDLSQQQRTA 441
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 112/309 (36%), Positives = 171/309 (55%)
Query: 136 SGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGK 195
S EN+ P + F E+D+ L ++ Y +PTP+Q P + GRD++ A+TGSGK
Sbjct: 159 SSENLLPILQ-FDELDVSAKLREGLKN--YKEPTPIQAATWPYLLAGRDVVGIAETGSGK 215
Query: 196 TAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVV 255
T AF P + QY+ +++V P L+++PTREL+ Q + T +K V
Sbjct: 216 TVAFGIPAL------QYLNGLSDNKSV-PRVLVVSPTRELAIQTYENLNSLIQGTNLKAV 268
Query: 256 VAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFE 315
V YGGAP ++Q R + +++ TPGRL+DL+ + + YL LDEADRMLD GFE
Sbjct: 269 VVYGGAPKSEQARAA-KNASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFE 327
Query: 316 PQIRKIVQQMDMPPP-GMRQTMLFSATFPKEIQRLASDFLANYIFLAVG--RVGSSTDLI 372
IR I+ P G RQT+ FSAT+P+ ++ LA+ FL + + + +G + +S + I
Sbjct: 328 QDIRNIISHTPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQN-I 386
Query: 373 VQRVEFVHESDKRSHLMD-LLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
Q VE + + + ++D LL +++G GK L+FV KK A +E L +
Sbjct: 387 TQIVEILDDPRSKERMLDNLLRKHLSSG--GKDDKILIFVLYKKEAARVEGTLARK-YNV 443
Query: 432 TTIHGDRTQ 440
IHGD +Q
Sbjct: 444 VGIHGDMSQ 452
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 462 (167.7 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 113/309 (36%), Positives = 169/309 (54%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G P V +FA + L IR+ +Y +PTP+Q AIP ++ GRD++ A+TG
Sbjct: 253 LRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTG 312
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKTAA+ +P I IM + ++ G P+A+I+ PTREL+ Q+ EAKKF +
Sbjct: 313 SGKTAAYLWPAIVHIMDQPDLKAGEG-----PVAVIVVPTRELAIQVFQEAKKFCKVYNI 367
Query: 253 KVVVAYGGAPINQQLRELER-GVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLD 311
+ AYGG +Q EL+ G +++V TPGR++DL++ + +L DEADRM D
Sbjct: 368 NPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFD 427
Query: 312 MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDL 371
MGFE Q++ I D P RQ ++FSATF ++++RLA D L + + + G VG +
Sbjct: 428 MGFEAQVKSI---SDHVRPD-RQCLMFSATFKQKVERLARDALVDPVRIVQGEVGEANAD 483
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I Q+V + D + H L+ V GK L+FV K ++ + L M F
Sbjct: 484 IEQKVFVMQNQDVKLHW--LIRNLVEFASLGK---VLIFVTKKLDSEDVAKKLKMKDFDI 538
Query: 432 TTIHGDRTQ 440
+HGD Q
Sbjct: 539 VLLHGDMLQ 547
>UNIPROTKB|E2R4Y9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
Length = 623
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 116/316 (36%), Positives = 177/316 (56%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G++V + F EALN N++ Y PTP+Q IP+ + GRD++A A TG
Sbjct: 192 IVVQGQDVTRPIIDFEHCGFPEALNHNLKTSGYEVPTPIQMQMIPVGLLGRDVLASADTG 251
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKF-SYQTG 251
SGKTAAF P+I+ + E S+T P ALIL PTREL+ QI +AK+ S
Sbjct: 252 SGKTAAFLLPVITRALCE--------SKT--PSALILTPTRELAIQIENQAKELMSGLPR 301
Query: 252 VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLD 311
+K V+ GG P+ QL L + V +++ATPGRL+D+++++ V L I+ + +DEAD ML
Sbjct: 302 MKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSVELCGIKIVVVDEADTMLK 361
Query: 312 MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDL 371
MGF+ Q+ I++ + P QT+L SAT P I++LAS L N + + G
Sbjct: 362 MGFQQQVLDILEHV----PNDSQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCSS 417
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY-MNGFP 430
+ Q + +V E K+ L ++L N + LVFV+ K GAD L + + G
Sbjct: 418 VRQIILWVEEPAKKKKLFEIL-----NDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLK 472
Query: 431 ATTIHGDRTQ-QRTSI 445
+ +IH +++Q +R +I
Sbjct: 473 SVSIHSEKSQTERKNI 488
>UNIPROTKB|E2R4Z9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
Length = 569
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 116/316 (36%), Positives = 177/316 (56%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G++V + F EALN N++ Y PTP+Q IP+ + GRD++A A TG
Sbjct: 192 IVVQGQDVTRPIIDFEHCGFPEALNHNLKTSGYEVPTPIQMQMIPVGLLGRDVLASADTG 251
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKF-SYQTG 251
SGKTAAF P+I+ + E S+T P ALIL PTREL+ QI +AK+ S
Sbjct: 252 SGKTAAFLLPVITRALCE--------SKT--PSALILTPTRELAIQIENQAKELMSGLPR 301
Query: 252 VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLD 311
+K V+ GG P+ QL L + V +++ATPGRL+D+++++ V L I+ + +DEAD ML
Sbjct: 302 MKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSVELCGIKIVVVDEADTMLK 361
Query: 312 MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDL 371
MGF+ Q+ I++ + P QT+L SAT P I++LAS L N + + G
Sbjct: 362 MGFQQQVLDILEHV----PNDSQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCSS 417
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY-MNGFP 430
+ Q + +V E K+ L ++L N + LVFV+ K GAD L + + G
Sbjct: 418 VRQIILWVEEPAKKKKLFEIL-----NDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLK 472
Query: 431 ATTIHGDRTQ-QRTSI 445
+ +IH +++Q +R +I
Sbjct: 473 SVSIHSEKSQTERKNI 488
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 115/303 (37%), Positives = 168/303 (55%)
Query: 150 IDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMR 209
I L L ++ C Y TP+Q+ AIP+ G DL+A AQTG+GKTAAF PI+ I +
Sbjct: 6 IGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPILDAIAK 65
Query: 210 EQYVQRPRGSRTVYPLA------------LILAPTRELSSQIHVEAKKFSYQTGVKVVVA 257
+ + + T A LIL PTREL++Q+ K+FS +K V
Sbjct: 66 ANHAAKSSTTSTDENSAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLPIKSGVV 125
Query: 258 YGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQ 317
YGG + Q + L++G+D+LVATPGRL++ L V L +++L LDEADRMLDMGF
Sbjct: 126 YGGGKMASQTKMLKQGLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLDMGFLTD 185
Query: 318 IRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVE 377
I K++ + QT++FSATF ++ LA+ L + ++V + +++ I Q V
Sbjct: 186 IEKLL----LAVKHKHQTLMFSATFSDRVKSLANQLLKSPKTISVSKENTTSGKIKQAVY 241
Query: 378 FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGD 437
+V E KR L +L+ GV+ Q + LVF TK+ A+ L L ++G A HGD
Sbjct: 242 WVTEERKRELLSELI------GVNNWQQV-LVFAGTKESANTLAKELKLDGIKAALCHGD 294
Query: 438 RTQ 440
+TQ
Sbjct: 295 KTQ 297
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 104/315 (33%), Positives = 172/315 (54%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ +GE++PP + F ++ L ++ + PTP+Q +P+ + GRD++ A TG
Sbjct: 85 ITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTG 144
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFS---YQ 249
SGKT F P+I ++E+ + P + P+AL++ P+REL+ Q + ++F +
Sbjct: 145 SGKTLVFVLPMIILALQEE-IMMPIAAGEG-PIALVICPSRELAKQTYDVVEQFVASLVE 202
Query: 250 TG---VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEA 306
G ++ ++ GG + QL +++GV I+VATPGRL D+L + ++SL R L LDEA
Sbjct: 203 DGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEA 262
Query: 307 DRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG 366
DR++D+GFE IR + RQT+LFSAT P +IQ A+ L + + VGR G
Sbjct: 263 DRLVDLGFEDDIRHVFDHFK----SQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAG 318
Query: 367 SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYM 426
++ ++Q VE+V + K +L++ L L+F E K D + +L +
Sbjct: 319 AANLDVIQEVEYVKQEAKIVYLLECLQKTTPP--------VLIFCENKADVDDIHEYLLL 370
Query: 427 NGFPATTIHGDRTQQ 441
G A IHG + Q+
Sbjct: 371 KGVEAVAIHGGKDQE 385
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 111/312 (35%), Positives = 169/312 (54%)
Query: 134 ETSGENVPPAVNTFAEIDLGEALNL--NIRRCKYVKPTPVQRHAIPISIGGRDLMACAQT 191
E S +PP VN+F + G ++ IR+ + KP+P+Q P+ + G+D + +QT
Sbjct: 72 EESTVKIPPPVNSFEQA-FGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQT 130
Query: 192 GSGKTAAFCFPIISGIMRE--QYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQ 249
GSGKT AF P + I + QY + + P L+L+PTREL+ QI E KK+SY
Sbjct: 131 GSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPS-PFVLVLSPTRELAQQIEGEVKKYSYN 189
Query: 250 TGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRM 309
G K V YGG +Q+ GV+I++ATPGRL DL +SL + Y+ LDEADRM
Sbjct: 190 -GYKSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRM 248
Query: 310 LDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SS 368
LDMGFE IR+I+ ++ P R L SAT+P+ +++L + + G + +S
Sbjct: 249 LDMGFEVAIRRIL--FEIRPD--RLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTS 304
Query: 369 TDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNG 428
+ Q EFV + + ++++ A HG+ ++FV++K AD L M G
Sbjct: 305 CKSVTQFFEFVPHDSRFLRVCEIVNFLTA--AHGQNYKMIIFVKSKVMADHLSSDFCMKG 362
Query: 429 FPATTIHGDRTQ 440
+ +HG R+Q
Sbjct: 363 INSQGLHGGRSQ 374
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 118/319 (36%), Positives = 170/319 (53%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
GE +P + +F E+ +A+ +++ V PTP+Q IP + GRD++ A TGSGKT
Sbjct: 29 GEGIPAPIKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 88
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH---VEAK-KFSYQTG- 251
F PII + EQ + P R P LI+ P+ ++ H +E K G
Sbjct: 89 LVFTLPIIMFCL-EQEKRLPFCKREG-PYGLIICPSVNVAKHTHHGIIEYYCKLLEDEGA 146
Query: 252 --VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRM 309
++ + GG + +Q+ ++ +ATPGRL+DLL + VSL + RYLALDEADRM
Sbjct: 147 PQMRCALCIGGMSVKEQMEVVK------LATPGRLMDLLNKKMVSLDICRYLALDEADRM 200
Query: 310 LDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSST 369
+DMGFE IR I G RQT+LFSAT PK+IQ A L I + VGR G+++
Sbjct: 201 IDMGFEEDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAAS 256
Query: 370 DLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGF 429
++Q VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 257 LDVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGV 308
Query: 430 PATTIHGDRTQQ-RT-SIE 446
A IHG + Q+ RT +IE
Sbjct: 309 EAVAIHGGKDQEERTKAIE 327
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 114/296 (38%), Positives = 169/296 (57%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
F + L L I C Y + T VQ+ IP+++ G+D+MACAQTG+GKTAAF P++
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVL-- 60
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
EQ +P + AL++ PTREL+ Q+ +K+S +K + YGGA +N Q
Sbjct: 61 ---EQLAAKPADKPLLR--ALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQ 115
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
+ +E+GVDILVATPGRL D++ + + L + L +DEADRMLD+GF I K V+++
Sbjct: 116 RKGVEQGVDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEK-VKRLI 174
Query: 327 MPPPGMRQTMLFSATFPKEIQRLASDFL--ANYIFLAVGRVGSSTDLIVQRVEFVHESDK 384
P + QTMLFSAT+ +++L+ L ++ +A S+ + +V RV DK
Sbjct: 175 AP---VHQTMLFSATYSDAVKQLSHKMLNQPQWVNVAENTTASTVEQLVYRV------DK 225
Query: 385 RSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
R +LL V + +Q L VF TK+ A+ L L ++G A HGD+TQ
Sbjct: 226 RRKA-ELLSELVGRN-NWRQVL--VFASTKECAEHLLQELTLDGISAGVFHGDKTQ 277
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 114/296 (38%), Positives = 169/296 (57%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
F + L L I C Y + T VQ+ IP+++ G+D+MACAQTG+GKTAAF P++
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVL-- 60
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
EQ +P + AL++ PTREL+ Q+ +K+S +K + YGGA +N Q
Sbjct: 61 ---EQLAAKPADKPLLR--ALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQ 115
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
+ +E+GVDILVATPGRL D++ + + L + L +DEADRMLD+GF I K V+++
Sbjct: 116 RKGVEQGVDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEK-VKRLI 174
Query: 327 MPPPGMRQTMLFSATFPKEIQRLASDFL--ANYIFLAVGRVGSSTDLIVQRVEFVHESDK 384
P + QTMLFSAT+ +++L+ L ++ +A S+ + +V RV DK
Sbjct: 175 AP---VHQTMLFSATYSDAVKQLSHKMLNQPQWVNVAENTTASTVEQLVYRV------DK 225
Query: 385 RSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
R +LL V + +Q L VF TK+ A+ L L ++G A HGD+TQ
Sbjct: 226 RRKA-ELLSELVGRN-NWRQVL--VFASTKECAEHLLQELTLDGISAGVFHGDKTQ 277
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 114/294 (38%), Positives = 161/294 (54%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
F + L + I Y P+P+Q AIP + G+D+MA AQTG+GKTA F PI+
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPIL-- 60
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
E + P+ R ALIL PTREL++QI + +K V +GG IN Q
Sbjct: 61 ---ELLAKGPK-VRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQ 116
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
++ + +G DILVATPGRL+DL + V + L LDEADRMLDMGF I KI++ +
Sbjct: 117 MQRMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLL- 175
Query: 327 MPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRS 386
P RQ +LFSATF EI+ LA + N + ++V S+ + Q ++ +D +
Sbjct: 176 ---PEKRQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQ---CIYPADVKK 229
Query: 387 HLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
D+L V G + +Q L VF+ TK GA+ L +L G A IHG+++Q
Sbjct: 230 K-PDMLVKLVKEG-NWQQVL--VFMRTKHGANRLATYLNEQGLTAAAIHGNKSQ 279
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 114/294 (38%), Positives = 161/294 (54%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
F + L + I Y P+P+Q AIP + G+D+MA AQTG+GKTA F PI+
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPIL-- 60
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
E + P+ R ALIL PTREL++QI + +K V +GG IN Q
Sbjct: 61 ---ELLAKGPK-VRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQ 116
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
++ + +G DILVATPGRL+DL + V + L LDEADRMLDMGF I KI++ +
Sbjct: 117 MQRMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLL- 175
Query: 327 MPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRS 386
P RQ +LFSATF EI+ LA + N + ++V S+ + Q ++ +D +
Sbjct: 176 ---PEKRQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQ---CIYPADVKK 229
Query: 387 HLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
D+L V G + +Q L VF+ TK GA+ L +L G A IHG+++Q
Sbjct: 230 K-PDMLVKLVKEG-NWQQVL--VFMRTKHGANRLATYLNEQGLTAAAIHGNKSQ 279
>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
symbol:PFE0430w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 460 (167.0 bits), Expect = 3.4e-42, P = 3.4e-42
Identities = 112/315 (35%), Positives = 177/315 (56%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+N P V F + L + + + + K +Q IP + GRD++A A+TGSGKT
Sbjct: 715 GKNCPRPVQYFYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKT 774
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVV 256
++ FP+I ++ ++ ++ G P+++IL PTRELS Q+ EAK + ++++
Sbjct: 775 LSYLFPVIRHVLHQEPLRNNDG-----PISIILTPTRELSIQVKNEAKIYCKAVNIEILA 829
Query: 257 AYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMG 313
YGG+ I +QL+ L++GV+ILV TPGR++D+L +V+ L + ++ LDEADR+LD+G
Sbjct: 830 VYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLG 889
Query: 314 FEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIV 373
FE QI I++ +QT + SATFP IQ +A L I + VG G + + I
Sbjct: 890 FESQIYNILRNCRKD----KQTAMISATFPNYIQNMAKKLLYKPIEIIVGEKGKTNNNIY 945
Query: 374 QRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATT 433
Q VE + ES K L+ LL + K L L+FV + AD L LY +
Sbjct: 946 QFVEIIEESKKVFRLLKLLGEWI------KYGLVLIFVNKQIEADLLYLELYKYDYNLLV 999
Query: 434 IHG--DRTQQRTSIE 446
+HG D+T ++ ++E
Sbjct: 1000 LHGGQDQTDRQFTLE 1014
>UNIPROTKB|Q8I416 [details] [associations]
symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 460 (167.0 bits), Expect = 3.4e-42, P = 3.4e-42
Identities = 112/315 (35%), Positives = 177/315 (56%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+N P V F + L + + + + K +Q IP + GRD++A A+TGSGKT
Sbjct: 715 GKNCPRPVQYFYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKT 774
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVV 256
++ FP+I ++ ++ ++ G P+++IL PTRELS Q+ EAK + ++++
Sbjct: 775 LSYLFPVIRHVLHQEPLRNNDG-----PISIILTPTRELSIQVKNEAKIYCKAVNIEILA 829
Query: 257 AYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMG 313
YGG+ I +QL+ L++GV+ILV TPGR++D+L +V+ L + ++ LDEADR+LD+G
Sbjct: 830 VYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLG 889
Query: 314 FEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIV 373
FE QI I++ +QT + SATFP IQ +A L I + VG G + + I
Sbjct: 890 FESQIYNILRNCRKD----KQTAMISATFPNYIQNMAKKLLYKPIEIIVGEKGKTNNNIY 945
Query: 374 QRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATT 433
Q VE + ES K L+ LL + K L L+FV + AD L LY +
Sbjct: 946 QFVEIIEESKKVFRLLKLLGEWI------KYGLVLIFVNKQIEADLLYLELYKYDYNLLV 999
Query: 434 IHG--DRTQQRTSIE 446
+HG D+T ++ ++E
Sbjct: 1000 LHGGQDQTDRQFTLE 1014
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 111/297 (37%), Positives = 163/297 (54%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
++ F L E++ + Y +PTP+Q+ IP I G DL+ AQTG+GKTAAF PI
Sbjct: 1 MSEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPI 60
Query: 204 ISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
I+ R + + + +R+ LIL PTREL+SQI +S G+K V YGG
Sbjct: 61 INKFGRNKIDIKAKSTRS-----LILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGR 115
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
Q+ +E G+DILVATPGRL+DL+E ++ + + LDEAD MLDMGF ++ I+
Sbjct: 116 QAQVDSIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIIS 175
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
++ P RQT+LFSAT P EI+ LA L + + + + DL+ Q V + +S+
Sbjct: 176 KL----PKSRQTLLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSN 231
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
K L ++L + K L+F +TK GAD + L A ++H +TQ
Sbjct: 232 KVPLLFNIL----TKADYEK---VLIFCKTKYGADIIVKALEKASITAASLHSGKTQ 281
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 116/299 (38%), Positives = 162/299 (54%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TFA+ L E + + Y PTP+QR AIP + G D+ AQTG+GKTAAF P+I
Sbjct: 5 TFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMI- 63
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
Q + R +R P LIL PTREL++Q+ +K+ + + + GG +
Sbjct: 64 -----QRLSTGR-ARARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKE 117
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q L+RGVD+L+ATPGRL+D +R ++ + + L +DEADRMLDMGF P I KI ++
Sbjct: 118 QETLLQRGVDVLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAKL 177
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD-- 383
P RQT+LFSATFP +IQRLA F + + V R + + I Q V + +D
Sbjct: 178 ----PANRQTLLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVVKLPTNDGK 233
Query: 384 -KRSHLMDLLHA-QVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+R+ L ++ A V NG+ VF K D + L +G A IHGD Q
Sbjct: 234 ARRTALRRVIEATNVKNGI--------VFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQ 284
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 107/302 (35%), Positives = 167/302 (55%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
FA+++L E + + + TP+Q +P+S+GG+D+ AQTG+GKTAAF + +
Sbjct: 3 FADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLFTK 62
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
++R RG +P A+ILAPTREL QI +A+ G + YGG +Q
Sbjct: 63 LLRSG-----RGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQ 117
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
L+ G D++V TPGRL+D L++ SL+ I L +DEADRM DMGF +R I++++
Sbjct: 118 KNALKEGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRL- 176
Query: 327 MPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRS 386
PP RQ ++FSAT + + LA +F+ +AV + + + Q + V +K
Sbjct: 177 -PPYDKRQNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQVLYHVGRKEKFP 235
Query: 387 HLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQRTSIE 446
L+ LL + G + T++FV TK+ A+ L+ L N FP I GD +QR ++
Sbjct: 236 LLLGLLRKE------GMER-TMIFVNTKREAEFLDERLNANDFPCRVISGD-VEQRKRLK 287
Query: 447 II 448
I+
Sbjct: 288 IL 289
>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
symbol:PFL1310c "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
Uniprot:Q8I5E7
Length = 742
Score = 345 (126.5 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 82/224 (36%), Positives = 129/224 (57%)
Query: 227 LILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVD 286
LIL PTREL Q+ E K F +K V YGG P Q+ L++G DI+VATPGRL+D
Sbjct: 431 LILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIVATPGRLLD 490
Query: 287 LLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEI 346
LE ++L Y+ +DEADR+LDMGFE Q+RKI+ Q++ +Q + +AT+P+++
Sbjct: 491 FLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKN----KQLLFLTATWPEQV 546
Query: 347 QRLASDFLA-NYIFLAVGRVGSSTDLIVQRVEFVHES-DKRSHLMDLLHAQVANGVHGKQ 404
++LA DF + + + + +G+ + + +++ + S D + L+D L N
Sbjct: 547 RKLAYDFCSYDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKLLDWLKENYENNK---- 602
Query: 405 ALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQRTSIEII 448
L+F +TK+ D L L + + A +IHGD+ QQR I+
Sbjct: 603 --ILIFCDTKRNCDNLCKELRYHQYNALSIHGDK-QQRERDRIL 643
Score = 130 (50.8 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 25/70 (35%), Positives = 44/70 (62%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
+N F+++ E++ LN K+ +PT +Q+ PI++ G+DL+ A+TGSGKT AF P
Sbjct: 287 INKFSDVCFHESI-LNYLNNKFSEPTAIQKITWPIALSGKDLIGVAETGSGKTLAFVLPC 345
Query: 204 ISGIMREQYV 213
I++ + +
Sbjct: 346 FMHILKHKEI 355
Score = 43 (20.2 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 13/67 (19%), Positives = 31/67 (46%)
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
+E R+ +++ + + V +S L ++ + V D + + D +H G GK
Sbjct: 637 RERDRILNNYKTDRCNILVATDVASRGLDIKNISVVINYDIPNTIEDYIHRIGRTGRAGK 696
Query: 404 QALTLVF 410
+ +++F
Sbjct: 697 KGKSILF 703
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 107/295 (36%), Positives = 165/295 (55%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F+ + L + I Y KPT +Q+ AIP+ + G+D++A AQTG+GKTA+F P++
Sbjct: 2 SFSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLE 61
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
+ QY + + R ALIL PTREL+ Q+ +++ + + YGG +
Sbjct: 62 QL-NSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQE 120
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q + L GVDILVATPGRL+D+ + + + L LDEADRMLDMGF I KI++++
Sbjct: 121 QKQRLIWGVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERL 180
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P RQ +LFSAT +E++ LA + + +++G +S I Q + V +++K
Sbjct: 181 ----PEHRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTVDKANKS 236
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ L ++ Q + +QAL +F+ETK GA L L G A +IH R Q
Sbjct: 237 ALLSHIITTQ-----NWQQAL--IFIETKHGAAKLVSQLEKRGIVAESIHSGRAQ 284
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 110/296 (37%), Positives = 160/296 (54%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
F A+ I Y PTP+Q AIP + GRD+M AQTG+GKTAAF PI+
Sbjct: 3 FKSFGFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPILHR 62
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
+ Q RG R AL++APTREL+ QI+ QT ++ V YGG +N Q
Sbjct: 63 LQ-----QGERG-RV---RALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQ 113
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
+++L+ G +++VA PGRL+D + + + L + L LDEAD+M DMGF P IR++++ +
Sbjct: 114 VQKLKAGAEVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHL- 172
Query: 327 MPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRS 386
PP RQT+LFSAT P +I+ LA D L + + + VG V + + + V + K
Sbjct: 173 -PP--RRQTLLFSATMPIDIRTLAQDILVDPVTVQVGTVAPAVT-VAHALYPVEQHLKTP 228
Query: 387 HLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQR 442
L++LL H L+F TK A L L G+ A ++ G+ +Q R
Sbjct: 229 LLLELLR-------HTDTESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNR 277
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 105/295 (35%), Positives = 166/295 (56%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F+ + L L + Y P+P+Q AIP + G+D+MA AQTG+GKTA F P++
Sbjct: 2 SFSALGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
+ + + + +T AL+L PTREL++Q+ + + ++ V +GG PIN
Sbjct: 62 LLAKGH---KAKSGQT---RALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINP 115
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q+ +L GVD+LVATPGRL+DL+++ V + L LDEADRMLDMGF I+KI+ +
Sbjct: 116 QINKLRHGVDVLVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKILALL 175
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P RQ ++FSATF EI+ LA + + + ++V ++ + Q + V ++ K
Sbjct: 176 ----PAKRQNLMFSATFSDEIRELAKGLVNHPVEISVTPRNAAATTVKQWICPVDKTQKS 231
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ L+ L+ + + +Q L VF TK GA+ L L A IHG+++Q
Sbjct: 232 ALLIQLIKQE-----NWQQVL--VFSRTKHGANRLAKSLIQAEISAAAIHGNKSQ 279
>UNIPROTKB|Q8EHT1 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 120/322 (37%), Positives = 178/322 (55%)
Query: 131 IP-VETSGENVPPAVNTFAEIDLGEALNLNI-RRCKYVKPTPVQRHAIPISIGGRDLMAC 188
IP + S E+ P ++ TFAE+ L AL + R K+ PT VQ+ AIP + GRDL+A
Sbjct: 3 IPKLSPSPESYPESL-TFAELGLNAALRKALPTRLKH--PTRVQQLAIPAILAGRDLLAL 59
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGS-RTVYPLALILAPTRELSSQI----HVEA 243
+QTGSGKT AF P++ + ++ VQ S PLAL+L PTREL+ Q+ H A
Sbjct: 60 SQTGSGKTFAFGLPLLQILWQQIAVQTTAKSVPAAKPLALVLVPTRELALQVSEALHALA 119
Query: 244 KKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLAL 303
+ S + + + GG + QQL +L ++VATPGRL+DL ++ +SL I++L L
Sbjct: 120 SQLSTSAPLNIQLLCGGVALEQQLADLSAKPQLVVATPGRLLDLCTQSHISLDAIKHLVL 179
Query: 304 DEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVG 363
DEADR+L+MGF P ++K++ M P +QT+LFSAT P+ + LA L N
Sbjct: 180 DEADRLLEMGFWPDMQKLMAMM----PKRKQTLLFSATLPEALDSLAGKLLTNDPL---- 231
Query: 364 RVGSST-DLIVQRVE----FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGAD 418
+V +ST + +V +E V++ K L+ LL + LVF+ + AD
Sbjct: 232 KVEASTRNAVVGEIEEQLYLVNKGSKAQALIALLKQY-------QWPQVLVFISARDDAD 284
Query: 419 ALEHWLYMNGFPATTIHGDRTQ 440
A+ L G A +HG++ Q
Sbjct: 285 AIAKRLVKAGINAAALHGEKDQ 306
>TIGR_CMR|SO_1136 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 120/322 (37%), Positives = 178/322 (55%)
Query: 131 IP-VETSGENVPPAVNTFAEIDLGEALNLNI-RRCKYVKPTPVQRHAIPISIGGRDLMAC 188
IP + S E+ P ++ TFAE+ L AL + R K+ PT VQ+ AIP + GRDL+A
Sbjct: 3 IPKLSPSPESYPESL-TFAELGLNAALRKALPTRLKH--PTRVQQLAIPAILAGRDLLAL 59
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGS-RTVYPLALILAPTRELSSQI----HVEA 243
+QTGSGKT AF P++ + ++ VQ S PLAL+L PTREL+ Q+ H A
Sbjct: 60 SQTGSGKTFAFGLPLLQILWQQIAVQTTAKSVPAAKPLALVLVPTRELALQVSEALHALA 119
Query: 244 KKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLAL 303
+ S + + + GG + QQL +L ++VATPGRL+DL ++ +SL I++L L
Sbjct: 120 SQLSTSAPLNIQLLCGGVALEQQLADLSAKPQLVVATPGRLLDLCTQSHISLDAIKHLVL 179
Query: 304 DEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVG 363
DEADR+L+MGF P ++K++ M P +QT+LFSAT P+ + LA L N
Sbjct: 180 DEADRLLEMGFWPDMQKLMAMM----PKRKQTLLFSATLPEALDSLAGKLLTNDPL---- 231
Query: 364 RVGSST-DLIVQRVE----FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGAD 418
+V +ST + +V +E V++ K L+ LL + LVF+ + AD
Sbjct: 232 KVEASTRNAVVGEIEEQLYLVNKGSKAQALIALLKQY-------QWPQVLVFISARDDAD 284
Query: 419 ALEHWLYMNGFPATTIHGDRTQ 440
A+ L G A +HG++ Q
Sbjct: 285 AIAKRLVKAGINAAALHGEKDQ 306
>UNIPROTKB|Q86TM3 [details] [associations]
symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
GermOnline:ENSG00000184735 Uniprot:Q86TM3
Length = 631
Score = 437 (158.9 bits), Expect = 4.1e-41, P = 4.1e-41
Identities = 107/291 (36%), Positives = 164/291 (56%)
Query: 159 NIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG 218
+I R VKPTP+Q A PI + G DL+ AQTG+GKT ++ P + + + R
Sbjct: 236 SIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRN 295
Query: 219 SRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILV 278
P L+L PTREL+ + E K+SY+ G+K + YGG N Q+ ++ +GVDI++
Sbjct: 296 G----PGMLVLTPTRELALHVEAECSKYSYK-GLKSICIYGGRNRNGQIEDISKGVDIII 350
Query: 279 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLF 338
ATPGRL DL V+L+ I YL +DEAD+MLDM FEPQIRKI+ +D+ P RQT++
Sbjct: 351 ATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKIL--LDVRPD--RQTVMT 406
Query: 339 SATFPKEIQRLASDFLANYIFLAVGRVGS-STDLIVQRVEFVHESDKRSHLMDLLHAQVA 397
SAT+P +++LA +L + + + VG + + + + Q + E +KR+ + +
Sbjct: 407 SATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKRALTQEFVENMSP 466
Query: 398 NGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ--QRTSIE 446
N ++FV K AD L + G A ++HG+ Q Q ++E
Sbjct: 467 NDK------VIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVE 511
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 105/295 (35%), Positives = 164/295 (55%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F+ + L L + Y +PTP+Q AIP + +D+MA AQTG+GKTAAF PI+
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
+M + Q ++ + AL+L PTREL+ Q+ K++ T ++V +AYGG I
Sbjct: 62 LLMADN--QSDHAAKAIR--ALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEA 117
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q G+D+L+ATPGRL+D L + ++L + L DEADRMLDMGF +I+ +++Q+
Sbjct: 118 QQAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQV 177
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P RQT+LFSAT I + + L + + V + ++ I QRV + +SD++
Sbjct: 178 ----PAQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRV-YAIDSDRK 232
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ + H + + +Q L +F TK+G D L L G + HGD +Q
Sbjct: 233 TEFVS--H--LVRSKNWQQVL--IFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQ 281
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 111/295 (37%), Positives = 164/295 (55%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F+++ L + L + + Y KPT +Q AIP+ + GRDL+A AQTG+GKTA+F PI+
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
+ R+ QR + R ALIL PTREL+ Q+ + +++ TG+K + +GG
Sbjct: 62 KL-RQGQTQRKKRVR-----ALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQA 115
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q + L GVD+LVATPGRL+DL + V + I + LDEADRMLDMGF I KI+ +
Sbjct: 116 QKQRLIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCL 175
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P Q +LFSAT ++++ LA + + +++ +S I Q + V + K
Sbjct: 176 ----PSEVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKS 231
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ L L++ Q QAL +F+ETK GA L L G A H R+Q
Sbjct: 232 ALLSHLINEQ-----QWDQAL--IFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQ 279
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 105/295 (35%), Positives = 164/295 (55%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F+ + L L + Y +PTP+Q AIP + +D+MA AQTG+GKTAAF PI+
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
+M + Q ++ + AL+L PTREL+ Q+ K++ T ++V +AYGG I
Sbjct: 62 LLMADN--QSDHAAKAIR--ALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEA 117
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q G+D+L+ATPGRL+D L + ++L + L DEADRMLDMGF +I+ +++Q+
Sbjct: 118 QQAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQV 177
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P RQT+LFSAT I + + L + + V + ++ I QRV + +SD++
Sbjct: 178 ----PAQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRV-YAIDSDRK 232
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ + H + + +Q L +F TK+G D L L G + HGD +Q
Sbjct: 233 TEFVS--H--LVRSKNWQQVL--IFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQ 281
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 111/295 (37%), Positives = 164/295 (55%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F+++ L + L + + Y KPT +Q AIP+ + GRDL+A AQTG+GKTA+F PI+
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
+ R+ QR + R ALIL PTREL+ Q+ + +++ TG+K + +GG
Sbjct: 62 KL-RQGQTQRKKRVR-----ALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQA 115
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q + L GVD+LVATPGRL+DL + V + I + LDEADRMLDMGF I KI+ +
Sbjct: 116 QKQRLIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCL 175
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P Q +LFSAT ++++ LA + + +++ +S I Q + V + K
Sbjct: 176 ----PSEVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKS 231
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ L L++ Q QAL +F+ETK GA L L G A H R+Q
Sbjct: 232 ALLSHLINEQ-----QWDQAL--IFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQ 279
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 103/298 (34%), Positives = 161/298 (54%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F + A+ +R C Y +PTP+Q AIP + G D++ AQTG+GKTAA+ P+I
Sbjct: 2 SFESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVI- 60
Query: 206 GIMREQYVQRPRGS-RTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPIN 264
++ + PRG RT L+LAPTREL+ QI + + ++ YGG ++
Sbjct: 61 ----QKMLSTPRGRVRT-----LVLAPTRELACQIAESFRSLGQRARIRECSIYGGVNMD 111
Query: 265 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 324
QQ+R L GVD++VA PGRL+D + R + + + L +DEADRM DMGF+P I+ I++
Sbjct: 112 QQIRRLRSGVDVVVACPGRLLDHIWRGTIDICGVETLIIDEADRMFDMGFQPDIQSILKC 171
Query: 325 MDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDK 384
+ P QT+LFSAT P E+++L + N + + +G ++ + V V K
Sbjct: 172 LVQP----HQTLLFSATMPPEVRKLTLETQTNPVTIQIGTQAPASS-VSHSVYPVKNHQK 226
Query: 385 RSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQR 442
L+++L V L+F TK GA+ L + GF ++ G+ +Q R
Sbjct: 227 TPLLIEILKTTETKSV-------LIFARTKYGAENLADEISRAGFTTASLQGNLSQNR 277
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 111/306 (36%), Positives = 161/306 (52%)
Query: 143 AVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFP 202
+V +FAE+ + L + YV PTPVQ IP + GRD++A A TGSGKTAAF P
Sbjct: 7 SVASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALP 66
Query: 203 IISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKF-SYQTG-VKVVVAYGG 260
++ + + + G L+L PTREL+ Q+ + S+ G +K+V A+GG
Sbjct: 67 LLQRLSEAKSADKSAG----VVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGG 122
Query: 261 APINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRK 320
+N Q++ L G D+LVATPGRL+DLL + L + LDEADRML +GF ++ +
Sbjct: 123 VSVNLQMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQ 182
Query: 321 IVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVH 380
++ + P +QT+LFSATFP+E++ L + L + + ST I QRV V+
Sbjct: 183 VLAAL----PRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQEST--IEQRVITVN 236
Query: 381 ESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
K + L L+ QAL +FV K + L L G A HGD+ Q
Sbjct: 237 REQKTALLAHLIKQH-----QWSQAL--IFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQ 289
Query: 441 -QRTSI 445
RT +
Sbjct: 290 GARTRV 295
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 111/306 (36%), Positives = 161/306 (52%)
Query: 143 AVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFP 202
+V +FAE+ + L + YV PTPVQ IP + GRD++A A TGSGKTAAF P
Sbjct: 7 SVASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALP 66
Query: 203 IISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKF-SYQTG-VKVVVAYGG 260
++ + + + G L+L PTREL+ Q+ + S+ G +K+V A+GG
Sbjct: 67 LLQRLSEAKSADKSAG----VVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGG 122
Query: 261 APINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRK 320
+N Q++ L G D+LVATPGRL+DLL + L + LDEADRML +GF ++ +
Sbjct: 123 VSVNLQMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQ 182
Query: 321 IVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVH 380
++ + P +QT+LFSATFP+E++ L + L + + ST I QRV V+
Sbjct: 183 VLAAL----PRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQEST--IEQRVITVN 236
Query: 381 ESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
K + L L+ QAL +FV K + L L G A HGD+ Q
Sbjct: 237 REQKTALLAHLIKQH-----QWSQAL--IFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQ 289
Query: 441 -QRTSI 445
RT +
Sbjct: 290 GARTRV 295
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 423 (154.0 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 124/363 (34%), Positives = 182/363 (50%)
Query: 98 REREVNPFGDDVGAEQPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEAL 156
R++E DD Q +E T ++ + ED + T G +P + ++ + L +
Sbjct: 343 RKKEAKQRWDDRHWSQKKLDEM-TDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHI 401
Query: 157 NLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP 216
I +C Y +PTP+QR AIPI + RD++ A+TGSGKTAAF P++ I + R
Sbjct: 402 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 461
Query: 217 RGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDI 276
S P A+ILAPTREL+ QI E KF G++ V GG Q L G +I
Sbjct: 462 EESDQG-PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEI 520
Query: 277 LVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMP--PPGMRQ 334
++ATPGRL+D+LE + L Y+ LDEADRM+DMGFEP ++KI++ M + P +
Sbjct: 521 VIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDE 580
Query: 335 T-----MLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFV------HES- 382
ML + K R F A + AV R+ S L V ++ HE
Sbjct: 581 AEDPEKMLANFESGKHKYRQTVMFTAT-MPPAVERLARSY-LRRPAVVYIGSAGKPHERV 638
Query: 383 DKRSHLMDLLHAQ---VANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRT 439
+++ LM + +A G ++FV KKG D L L G+ A T+HG +
Sbjct: 639 EQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKG 698
Query: 440 QQR 442
Q++
Sbjct: 699 QEQ 701
Score = 42 (19.8 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYED 130
+R ERE N D+ G Q + EE++ A ++
Sbjct: 218 ERMERETNGNEDEEG-RQKIREEKDKSKELHAIKE 251
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 423 (154.0 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 124/363 (34%), Positives = 182/363 (50%)
Query: 98 REREVNPFGDDVGAEQPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEAL 156
R++E DD Q +E T ++ + ED + T G +P + ++ + L +
Sbjct: 344 RKKEAKQRWDDRHWSQKKLDEM-TDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHI 402
Query: 157 NLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP 216
I +C Y +PTP+QR AIPI + RD++ A+TGSGKTAAF P++ I + R
Sbjct: 403 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 462
Query: 217 RGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDI 276
S P A+ILAPTREL+ QI E KF G++ V GG Q L G +I
Sbjct: 463 EESDQG-PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEI 521
Query: 277 LVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMP--PPGMRQ 334
++ATPGRL+D+LE + L Y+ LDEADRM+DMGFEP ++KI++ M + P +
Sbjct: 522 VIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDE 581
Query: 335 T-----MLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFV------HES- 382
ML + K R F A + AV R+ S L V ++ HE
Sbjct: 582 AEDPEKMLANFESGKHKYRQTVMFTAT-MPPAVERLARSY-LRRPAVVYIGSAGKPHERV 639
Query: 383 DKRSHLMDLLHAQ---VANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRT 439
+++ LM + +A G ++FV KKG D L L G+ A T+HG +
Sbjct: 640 EQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKG 699
Query: 440 QQR 442
Q++
Sbjct: 700 QEQ 702
Score = 42 (19.8 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYED 130
+R ERE N D+ G Q + EE++ A ++
Sbjct: 219 ERMERETNGNEDEEG-RQKIREEKDKSKELHAIKE 252
Score = 37 (18.1 bits), Expect = 3.9e-40, Sum P(2) = 3.9e-40
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEE 119
D R+ E + GD QP++ EE
Sbjct: 123 DSRKDEEDEHGDKKPKAQPLSLEE 146
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 423 (154.0 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 124/363 (34%), Positives = 182/363 (50%)
Query: 98 REREVNPFGDDVGAEQPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEAL 156
R++E DD Q +E T ++ + ED + T G +P + ++ + L +
Sbjct: 344 RKKEAKQRWDDRHWSQKKLDEM-TDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHI 402
Query: 157 NLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP 216
I +C Y +PTP+QR AIPI + RD++ A+TGSGKTAAF P++ I + R
Sbjct: 403 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 462
Query: 217 RGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDI 276
S P A+ILAPTREL+ QI E KF G++ V GG Q L G +I
Sbjct: 463 EESDQG-PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEI 521
Query: 277 LVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMP--PPGMRQ 334
++ATPGRL+D+LE + L Y+ LDEADRM+DMGFEP ++KI++ M + P +
Sbjct: 522 VIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDE 581
Query: 335 T-----MLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFV------HES- 382
ML + K R F A + AV R+ S L V ++ HE
Sbjct: 582 AEDPEKMLANFESGKHKYRQTVMFTAT-MPPAVERLARSY-LRRPAVVYIGSAGKPHERV 639
Query: 383 DKRSHLMDLLHAQ---VANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRT 439
+++ LM + +A G ++FV KKG D L L G+ A T+HG +
Sbjct: 640 EQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKG 699
Query: 440 QQR 442
Q++
Sbjct: 700 QEQ 702
Score = 42 (19.8 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYED 130
+R ERE N D+ G Q + EE++ A ++
Sbjct: 219 ERMERETNGNEDEEG-RQKIREEKDKSKELHAIKE 252
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 423 (154.0 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 124/363 (34%), Positives = 182/363 (50%)
Query: 98 REREVNPFGDDVGAEQPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEAL 156
R++E DD Q +E T ++ + ED + T G +P + ++ + L +
Sbjct: 344 RKKEAKQRWDDRHWSQKKLDEM-TDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHI 402
Query: 157 NLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP 216
I +C Y +PTP+QR AIPI + RD++ A+TGSGKTAAF P++ I + R
Sbjct: 403 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 462
Query: 217 RGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDI 276
S P A+ILAPTREL+ QI E KF G++ V GG Q L G +I
Sbjct: 463 EESDQG-PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEI 521
Query: 277 LVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMP--PPGMRQ 334
++ATPGRL+D+LE + L Y+ LDEADRM+DMGFEP ++KI++ M + P +
Sbjct: 522 VIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDE 581
Query: 335 T-----MLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFV------HES- 382
ML + K R F A + AV R+ S L V ++ HE
Sbjct: 582 AEDPEKMLANFESGKHKYRQTVMFTAT-MPPAVERLARSY-LRRPAVVYIGSAGKPHERV 639
Query: 383 DKRSHLMDLLHAQ---VANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRT 439
+++ LM + +A G ++FV KKG D L L G+ A T+HG +
Sbjct: 640 EQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKG 699
Query: 440 QQR 442
Q++
Sbjct: 700 QEQ 702
Score = 42 (19.8 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYED 130
+R ERE N D+ G Q + EE++ A ++
Sbjct: 219 ERMERETNGNEDEEG-RQKIREEKDKSKELHAIKE 252
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 108/281 (38%), Positives = 157/281 (55%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ PT +Q + PI +GG DL+ A TGSGKT AF P + I+ +RP T P
Sbjct: 130 FTAPTVIQGQSWPIILGGNDLVGLAATGSGKTLAFLLPALLKII--SLPKRPSYGAT--P 185
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
L L++APTREL+ QI K T ++ + AYGG Q R L GVDI++ TPGRL
Sbjct: 186 LVLVMAPTRELAQQIEEVCKTSIRGTSIRQLCAYGGLGKIDQSRILRNGVDIVIGTPGRL 245
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
DLL + +S ++YL LDEADRMLDMGF PQI ++ Q+ P RQT++FSAT+PK
Sbjct: 246 NDLLRKHHLS--SVQYLVLDEADRMLDMGFMPQIESLIDQI----PKERQTLMFSATWPK 299
Query: 345 EIQRLASDFLANYIFLAVGRVGSSTDL-IVQRVEFVHE-SDKRSHLMDLLHAQVANGVHG 402
E++ LAS FL + I + VG + + + Q + + + SD +S DL++ ++ +
Sbjct: 300 EVKLLASKFLKDPIKITVGSQELTGSINVTQHIVNIDDLSDLQSD--DLIYDEINKILTA 357
Query: 403 KQALT-LVFVETKKGADALEHWLY-MNGFPATTIHGDRTQQ 441
T +VF K D +H+L + +H + Q+
Sbjct: 358 DPTNTVIVFCNEKYKCDDFQHYLSTQKNVKSIVLHSGKDQR 398
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 432 (157.1 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 113/334 (33%), Positives = 170/334 (50%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
ED + G VP + + E + + ++ Y++PTP+QR AIPI + RD++
Sbjct: 285 EDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGV 344
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY 248
A+TGSGKTAAF P++ I ++R R + P A+I+APTREL+ QI E KF
Sbjct: 345 AETGSGKTAAFLLPLLVWITSLPKMERQE-HRDLGPYAIIMAPTRELAQQIEEETNKFGK 403
Query: 249 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 308
G+K V GGA Q +L GV++++ATPGRL+D+LE + L Y+ LDEADR
Sbjct: 404 LLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADR 463
Query: 309 MLDMGFEPQIRKIVQQMDMPPPGMR--------QTMLFSATFPKEIQRLASDFLANYIFL 360
MLDMGFEP ++K+++ M P M+ + L +E R F A +
Sbjct: 464 MLDMGFEPDVQKVLEYM--PDTNMKKDTDEFDNEEALMKGFSTREKYRQTVMFTAT-MSS 520
Query: 361 AVGRVGSSTDLIVQRVEFVH--ESDKRSHLMDLLHAQVANGVHGKQALT----------L 408
A+ R+ ++R VH + K + ++ + V K+ + +
Sbjct: 521 AIERLARQ---YLRRPAVVHIGSAGKPTERVEQVVYMVPEDRKRKKLVEVLESQFQPPII 577
Query: 409 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQR 442
+FV KKGAD L L GF T +HG + Q +
Sbjct: 578 IFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQ 611
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 114/305 (37%), Positives = 169/305 (55%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
F+E++L + I Y PTP+Q AIP ++ GRD++ AQTG+GKTA+F P+I+
Sbjct: 4 FSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMITL 63
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKF-SYQTGVKVVVAY--GGAPI 263
+ R + +R P +L+L PTREL++Q+ A+ F +Y +K+ A GG
Sbjct: 64 LARGR-------ARARMPRSLVLCPTRELAAQV---AENFDTYTKHLKLTKALLIGGVSF 113
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
+Q ++RGVD+L+ATPGRL+D ER ++ L ++ + +DEADRMLDMGF P I +I
Sbjct: 114 KEQDALIDRGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFS 173
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHES- 382
P RQT+ FSAT EI+R+ + FL+ + V R ++++ I Q V S
Sbjct: 174 LT----PFTRQTLFFSATMAPEIERITNTFLSAPARIEVARQATASETIEQGVVLFKGSR 229
Query: 383 -DKR-SHLMDLLHAQV-ANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRT 439
D+ S +L A + A G A+ +F K D + L G+ A IHGD
Sbjct: 230 RDREASEKRAVLRALIDAEGEKCTNAI--IFCNRKTDVDIVAKSLQKYGYDAAPIHGDLD 287
Query: 440 Q-QRT 443
Q QRT
Sbjct: 288 QSQRT 292
>UNIPROTKB|E1BXX5 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:AADN02033796 IPI:IPI00587299
RefSeq:XP_422189.2 ProteinModelPortal:E1BXX5
Ensembl:ENSGALT00000003389 GeneID:424346 KEGG:gga:424346
NextBio:20826688 Uniprot:E1BXX5
Length = 625
Score = 424 (154.3 bits), Expect = 1.3e-39, P = 1.3e-39
Identities = 95/262 (36%), Positives = 148/262 (56%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G+ VP + F E LN N++ Y PTP+Q IP+ + GRD++A A TG
Sbjct: 197 IAIQGQQVPRPIIEFEHCGFPETLNSNLKNSGYEVPTPIQMQMIPVGLLGRDIVASADTG 256
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKF-SYQTG 251
SGKTAAF P+I ++ E T P ALILAPTREL+ QI +AK+ +
Sbjct: 257 SGKTAAFLLPVIMKVLNE----------TETPSALILAPTRELAIQIERQAKELMAGLPN 306
Query: 252 VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLD 311
++ V+ GG P+ QL L++ V +++ATPGRL+++L ++ V L I+ + +DE D ML
Sbjct: 307 MRTVLLVGGLPLPPQLHRLKQSVKVIIATPGRLLEILRQSSVQLHGIKIVVVDEVDTMLK 366
Query: 312 MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDL 371
MGF+ Q+ I++ + QT+L SAT P I+ LA+ L N++ + +G
Sbjct: 367 MGFQQQVLDILEDISHD----HQTILVSATIPVGIEHLANQLLHNFVRITIGEKNLPCSN 422
Query: 372 IVQRVEFVHESDKRSHLMDLLH 393
+ Q + +V E K+ L ++L+
Sbjct: 423 VRQIILWVEEPSKKKKLFEILN 444
Score = 327 (120.2 bits), Expect = 8.9e-29, P = 8.9e-29
Identities = 80/230 (34%), Positives = 132/230 (57%)
Query: 219 SRTVYPLALILAPTRELSSQIHVEAKKF-SYQTGVKVVVAYGGAPINQQLRELERGVDIL 277
+ T P ALILAPTREL+ QI +AK+ + ++ V+ GG P+ QL L++ V ++
Sbjct: 273 NETETPSALILAPTRELAIQIERQAKELMAGLPNMRTVLLVGGLPLPPQLHRLKQSVKVI 332
Query: 278 VATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTML 337
+ATPGRL+++L ++ V L I+ + +DE D ML MGF+ Q+ I++ + QT+L
Sbjct: 333 IATPGRLLEILRQSSVQLHGIKIVVVDEVDTMLKMGFQQQVLDILEDISHD----HQTIL 388
Query: 338 FSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVA 397
SAT P I+ LA+ L N++ + +G + Q + +V E K+ L ++L
Sbjct: 389 VSATIPVGIEHLANQLLHNFVRITIGEKNLPCSNVRQIILWVEEPSKKKKLFEIL----- 443
Query: 398 NGVHGKQALTLVFVETKKGADALEHWLY-MNGFPATTIHGDRTQ-QRTSI 445
N + LVFV+ K GAD L ++ + G T++H +++Q +RT+I
Sbjct: 444 NDKKLFKPPVLVFVDCKLGADLLSDAVHKITGLQCTSMHSEKSQVERTAI 493
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 108/302 (35%), Positives = 155/302 (51%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TF + L L I+R + + TP+Q IP+ + +D++ AQTG+GKTAAF P++
Sbjct: 4 TFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
I E S + A+++APTREL+ Q+ E K +V+ YGG I +
Sbjct: 64 KINPE--------SPNIQ--AIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGR 113
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q+R L++ I+V TPGRL+D + R + LQ + + LDEAD ML+MGF I I+ +
Sbjct: 114 QIRALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNV 173
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P QT+LFSAT P I+R+A F+ N + V + I Q VHE K
Sbjct: 174 ----PAEHQTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKF 229
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQRTSI 445
L LL Q L +VF TK+ D L L + G+ A IHGD TQ + +
Sbjct: 230 DTLTRLLDIQ-------SPELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMV 282
Query: 446 EI 447
+
Sbjct: 283 AL 284
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 102/294 (34%), Positives = 158/294 (53%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
F+++ L AL + Y PTP+Q AIP + G++++A AQTG+GKTA+F P++
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
+ RP+ R++ IL PTREL+ Q+ +++ + + YGG Q
Sbjct: 63 FADAPKI-RPKRVRSI-----ILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQ 116
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
+ L GVD+LVATPGRL+D+ + + + L LDEADRMLDMGF I I++++
Sbjct: 117 KKRLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKL- 175
Query: 327 MPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRS 386
P RQ +LFSAT K+++ LA + + I + + R +++ I Q + V + D++S
Sbjct: 176 ---PEQRQNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTV-DKDRKS 231
Query: 387 HLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
L+ H N A L+F++TK GA L L G A H R+Q
Sbjct: 232 ALLS--HLIKENN----WAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQ 279
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 102/294 (34%), Positives = 158/294 (53%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
F+++ L AL + Y PTP+Q AIP + G++++A AQTG+GKTA+F P++
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
+ RP+ R++ IL PTREL+ Q+ +++ + + YGG Q
Sbjct: 63 FADAPKI-RPKRVRSI-----ILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQ 116
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
+ L GVD+LVATPGRL+D+ + + + L LDEADRMLDMGF I I++++
Sbjct: 117 KKRLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKL- 175
Query: 327 MPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRS 386
P RQ +LFSAT K+++ LA + + I + + R +++ I Q + V + D++S
Sbjct: 176 ---PEQRQNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTV-DKDRKS 231
Query: 387 HLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
L+ H N A L+F++TK GA L L G A H R+Q
Sbjct: 232 ALLS--HLIKENN----WAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQ 279
>UNIPROTKB|I3LNN1 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:PIRNWKE Ensembl:ENSSSCT00000027880 Uniprot:I3LNN1
Length = 801
Score = 401 (146.2 bits), Expect = 3.8e-39, Sum P(2) = 3.8e-39
Identities = 91/229 (39%), Positives = 130/229 (56%)
Query: 98 REREVNPFGDDVGAEQPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEAL 156
R++E DD Q +E T ++ + ED + T G +P + ++ + L +
Sbjct: 344 RKKEAKQRWDDRHWSQKKLDEM-TDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHI 402
Query: 157 NLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP 216
I +C Y +PTP+QR AIPI + RD++ A+TGSGKTAAF P++ I + R
Sbjct: 403 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 462
Query: 217 RGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDI 276
S P A+ILAPTREL+ QI E KF G++ V GG Q L G +I
Sbjct: 463 EESDQG-PYAIILAPTRELAQQIEEETIKFGKPLGIRPVAVIGGISREDQGFRLRMGCEI 521
Query: 277 LVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
++ATPGRL+D+LE + L Y+ LDEADRM+DMGFEP ++KI++ M
Sbjct: 522 VIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHM 570
Score = 50 (22.7 bits), Expect = 3.8e-39, Sum P(2) = 3.8e-39
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 355 ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETK 414
A I +A G D +Q V V D ++ D +H G GK + + F+ TK
Sbjct: 695 AKDILVATDVAGRGID--IQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFL-TK 751
Query: 415 K 415
+
Sbjct: 752 E 752
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 425 (154.7 bits), Expect = 4.7e-39, P = 4.7e-39
Identities = 122/363 (33%), Positives = 178/363 (49%)
Query: 98 REREVNPFGDDVGAEQPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEAL 156
R++E DD Q +E T ++ + ED + T G +P + + E L +
Sbjct: 331 RKKEAKQRWDDRHWSQKKLDEM-TDRDWRIFREDYSITTKGGKIPNPIRNWKEYSLPPHI 389
Query: 157 NLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP 216
I +C Y PTP+QR AIPI + RD++ A+TGSGKTAAF P++ I + R
Sbjct: 390 LEVIEKCGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 449
Query: 217 RGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDI 276
S P A+ILAPTREL+ QI E KF G++ V GG Q L G +I
Sbjct: 450 EDSDQG-PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEI 508
Query: 277 LVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIV-------QQMDMPP 329
++ATPGRL+D+LE + L Y+ LDEADRM+DMGFEP ++KI+ Q+ D
Sbjct: 509 VIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEYIPVTNQKPDTDD 568
Query: 330 PGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLM 389
+ M+ + K R F A + AV R+ S L V ++ + K +
Sbjct: 569 AEDPEKMMQNFESGKHKYRQTVMFTAT-MPPAVERLARSY-LRRPAVVYIGSAGKPHERV 626
Query: 390 DLLHAQVANGVHGKQALT----------LVFVETKKGADALEHWLYMNGFPATTIHGDRT 439
+ ++ G K+ L ++FV KKG D L L G+ A T+HG +
Sbjct: 627 EQKVILMSEGEKRKKLLEVLASGFEPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKG 686
Query: 440 QQR 442
Q++
Sbjct: 687 QEQ 689
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 109/304 (35%), Positives = 161/304 (52%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
+ TF E+ L + + I R + + TP+Q IP+S+ +D++ AQTG+GKTAAF PI
Sbjct: 1 MTTFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPI 60
Query: 204 ISGI-MREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAP 262
+ + ++ VQ AL++APTREL+ Q+ E K V+V+ YGG
Sbjct: 61 VEKVNVKNSAVQ-----------ALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQD 109
Query: 263 INQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIV 322
I +Q+R L++ ++V TPGR++D + R + L+ + + LDEAD ML+MGF I I+
Sbjct: 110 IERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAIL 169
Query: 323 QQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHES 382
+ P RQT+LFSAT P I+R+A F+ + V + I Q VHE
Sbjct: 170 SHV----PAERQTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEK 225
Query: 383 DKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-Q 441
K L LL Q L +VF TK+ D L L + G+ A IHGD +Q +
Sbjct: 226 KKFDILTRLLDIQAPE-------LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAK 278
Query: 442 RTSI 445
R S+
Sbjct: 279 RLSV 282
>UNIPROTKB|B7Z5N6 [details] [associations]
symbol:DDX59 "cDNA FLJ56549, highly similar to Homo sapiens
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (DDX59), transcript
variant 2, mRNA" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL445483 UniGene:Hs.497332 HGNC:HGNC:25360
HOGENOM:HOG000006599 HOVERGEN:HBG106120 OrthoDB:EOG4K9BBZ
EMBL:AK299219 IPI:IPI00514037 SMR:B7Z5N6 Ensembl:ENST00000367348
UCSC:uc010ppl.1 Uniprot:B7Z5N6
Length = 567
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 99/266 (37%), Positives = 154/266 (57%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
+ + + G+ V + F L E LN N+++ Y PTP+Q IP+ + GRD++A
Sbjct: 187 QQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILAS 246
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKF-S 247
A TGSGKTAAF P+I MR + S+T P ALIL PTREL+ QI +AK+ S
Sbjct: 247 ADTGSGKTAAFLLPVI---MRALFE-----SKT--PSALILTPTRELAIQIERQAKELMS 296
Query: 248 YQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEAD 307
+K V+ GG P+ QL L++ V +++ATPGRL+D+++++ V L ++ + +DEAD
Sbjct: 297 GLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEAD 356
Query: 308 RMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGS 367
ML MGF+ Q+ I++ + P QT+L SAT P I++LAS L N + + G
Sbjct: 357 TMLKMGFQQQVLDILENI----PNDCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNL 412
Query: 368 STDLIVQRVEFVHESDKRSHLMDLLH 393
+ Q + +V + K+ L ++L+
Sbjct: 413 PCANVRQIILWVEDPAKKKKLFEILN 438
Score = 309 (113.8 bits), Expect = 5.9e-27, P = 5.9e-27
Identities = 80/225 (35%), Positives = 129/225 (57%)
Query: 224 PLALILAPTRELSSQIHVEAKKF-SYQTGVKVVVAYGGAPINQQLRELERGVDILVATPG 282
P ALIL PTREL+ QI +AK+ S +K V+ GG P+ QL L++ V +++ATPG
Sbjct: 272 PSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPG 331
Query: 283 RLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATF 342
RL+D+++++ V L ++ + +DEAD ML MGF+ Q+ I++ + P QT+L SAT
Sbjct: 332 RLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENI----PNDCQTILVSATI 387
Query: 343 PKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHG 402
P I++LAS L N + + G + Q + +V + K+ L ++L N
Sbjct: 388 PTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVEDPAKKKKLFEIL-----NDKKL 442
Query: 403 KQALTLVFVETKKGADALEHWLY-MNGFPATTIHGDRTQ-QRTSI 445
+ LVFV+ K GAD L + + G + +IH +++Q +R +I
Sbjct: 443 FKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNI 487
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 102/281 (36%), Positives = 154/281 (54%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ PT +Q P+ GRD++ A+TGSGKT AF P + ++ + Q+ + P
Sbjct: 93 FASPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKVLDLKTKQK-----SCRP 147
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
LA++++PTREL+ QI+ + KF+ + ++V +GG ++Q RE + ++VATPGRL
Sbjct: 148 LAVVISPTRELAMQIYDQLVKFAEKVDIQVACIFGGVKKDEQ-REALKSAAVVVATPGRL 206
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
DL + L ++YL LDEADRMLD GFE I+ I+ M P RQT++F+AT+P
Sbjct: 207 KDLQNDGSLDLGRVKYLVLDEADRMLDKGFEQDIKDIISPM---PVSKRQTVMFTATWPP 263
Query: 345 EIQRLASDFLANYIFLAVGRVGSS----TDLIVQRVEFVHESDKRSHLMDLLHAQVANGV 400
++ LAS F+ + + + +G S+ I Q VE V +K L+ +L+ G
Sbjct: 264 IVRNLASTFMTSPVTVTIGGDPSADPRANSRIKQVVEVVKPHEKEQRLVQILNRH-QRGT 322
Query: 401 HGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
K L F KK A +E L GF IHGD +QQ
Sbjct: 323 PDK---VLAFCLYKKEAMRVERLLRTKGFKVAGIHGDLSQQ 360
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 110/296 (37%), Positives = 152/296 (51%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TFAE+ L + + C Y +PTPVQ A+P ++ DL+A AQTG+GKTAAF P +
Sbjct: 2 TFAELKLAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPALQ 61
Query: 206 GIMREQYVQRP-RGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPIN 264
+ Q P RG P L+L PTREL+ Q+ + + V+ GG P +
Sbjct: 62 RLSSPP--QGPGRG-----PRVLVLTPTRELAQQVTDAVRTYGAFMRVRSGAILGGMPYH 114
Query: 265 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 324
QLR L VD +VATPGRLVDLL+R + L + L LDEADRMLDMGF + +I
Sbjct: 115 AQLRLLSAPVDFIVATPGRLVDLLDRRSLDLSRLELLVLDEADRMLDMGFSDDVDRIAAA 174
Query: 325 MDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDK 384
P RQT+LF+AT + RLA L + + ++ + I QR+ H +D
Sbjct: 175 S----PATRQTLLFTATMDSAMARLAGRLLREPERIDIAGTKTTHEHIEQRL---HVADD 227
Query: 385 RSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
H LL + + + ++F TK+ A+ L L G A +HGD Q
Sbjct: 228 LHHKNRLLRHLITDESLRR---AIIFSATKRDAENLALELKAQGHSAAALHGDMPQ 280
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 419 (152.6 bits), Expect = 8.4e-39, P = 8.4e-39
Identities = 104/295 (35%), Positives = 153/295 (51%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
F+++ L A+ + +V PTP+Q AIP+ + GRD + AQTG+GKTAAF P+++
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQT-GVKVVVAYGGAPINQ 265
+ QY P A+++APTREL+ Q+ E K G+KV+ YGGA I
Sbjct: 88 LNLSQYK----------PQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILD 137
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q+R L+ G I+V TPGR+ DL+ R R+ L LDEAD ML MGF + I++Q
Sbjct: 138 QMRALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQA 197
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P Q +LFSAT P ++ + FL N + V + + Q+ V +K
Sbjct: 198 ----PESAQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKD 253
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ LL + + ++VFV T++ + L WL GF A +HGD Q
Sbjct: 254 EAMARLLETEETDA-------SIVFVRTRQDTERLADWLCARGFKAAALHGDIPQ 301
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 419 (152.6 bits), Expect = 8.4e-39, P = 8.4e-39
Identities = 104/295 (35%), Positives = 153/295 (51%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
F+++ L A+ + +V PTP+Q AIP+ + GRD + AQTG+GKTAAF P+++
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQT-GVKVVVAYGGAPINQ 265
+ QY P A+++APTREL+ Q+ E K G+KV+ YGGA I
Sbjct: 88 LNLSQYK----------PQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILD 137
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q+R L+ G I+V TPGR+ DL+ R R+ L LDEAD ML MGF + I++Q
Sbjct: 138 QMRALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQA 197
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P Q +LFSAT P ++ + FL N + V + + Q+ V +K
Sbjct: 198 ----PESAQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKD 253
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
+ LL + + ++VFV T++ + L WL GF A +HGD Q
Sbjct: 254 EAMARLLETEETDA-------SIVFVRTRQDTERLADWLCARGFKAAALHGDIPQ 301
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 416 (151.5 bits), Expect = 9.5e-39, P = 9.5e-39
Identities = 100/276 (36%), Positives = 160/276 (57%)
Query: 170 PVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALIL 229
P+Q+ + ++ GRD++ A+TG+GKT AF PII I++ + RG PL L+L
Sbjct: 129 PIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYN-AKHGRGRN---PLCLVL 184
Query: 230 APTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 289
APTREL+ Q+ E ++ + + + YGG PI QQ+R+L+ GVD+ V TPGR++DL++
Sbjct: 185 APTRELARQVEKEFRESA--PSLDTICLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMK 242
Query: 290 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRL 349
R ++L ++++ LDEAD+ML +GF + I++++ P RQ+M+FSAT P I+ L
Sbjct: 243 RGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL----PEKRQSMMFSATMPSWIRSL 298
Query: 350 ASDFLANYIFLAVGRVGSSTDLIVQRV---EFVHESDKRSHLMDLLHAQVANGVHGKQAL 406
+L N L V VG S + + + +S R+ ++ L + A G GK
Sbjct: 299 TKKYLNNP--LTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVTEHAKG--GK--- 351
Query: 407 TLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQR 442
+VF +TK+ AD L + L F +HGD +Q +
Sbjct: 352 CIVFTQTKRDADRLSYAL-ARSFKCEALHGDISQSQ 386
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 416 (151.5 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 103/297 (34%), Positives = 160/297 (53%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TF E+ L E L + Y KPTP+Q +I + G+D++ AQTG+GKT AF P+++
Sbjct: 7 TFRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLN 66
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFS-YQTGVKVVVAYGGAPIN 264
+ S+T P L+LAPTREL+ Q+ ++ + V+ YGG +
Sbjct: 67 KVT----------SQTT-PQILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQ 115
Query: 265 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 324
QQL L+RG ++V TPGR++D + R + L+ ++ L LDEAD ML MGF I I++
Sbjct: 116 QQLNALKRGPQVIVGTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMGFIDDIEWILEH 175
Query: 325 MDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDK 384
PP RQ LFSAT P++I+R+A+ L N +++ ++ D I QR V + +K
Sbjct: 176 T--PP--QRQLALFSATMPEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQVSQHNK 231
Query: 385 RSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
L+ +L + G+ ++FV T+ L L G+ ++ +HGD QQ
Sbjct: 232 LEALVRVLEVENTEGI-------IIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQ 281
>UNIPROTKB|Q5T1V6 [details] [associations]
symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL136611 EMBL:AL445483 EMBL:BC014183 EMBL:BC041801
IPI:IPI00010449 IPI:IPI00217157 RefSeq:NP_001026895.2
UniGene:Hs.497332 PDB:2YQP PDBsum:2YQP ProteinModelPortal:Q5T1V6
SMR:Q5T1V6 PhosphoSite:Q5T1V6 DMDM:74762230 PaxDb:Q5T1V6
PRIDE:Q5T1V6 DNASU:83479 Ensembl:ENST00000331314
Ensembl:ENST00000447706 GeneID:83479 KEGG:hsa:83479 UCSC:uc009wzk.3
CTD:83479 GeneCards:GC01M200594 HGNC:HGNC:25360 HPA:HPA047166
neXtProt:NX_Q5T1V6 PharmGKB:PA142672000 HOGENOM:HOG000006599
HOVERGEN:HBG106120 InParanoid:Q5T1V6 OMA:VTRPIID PhylomeDB:Q5T1V6
EvolutionaryTrace:Q5T1V6 GenomeRNAi:83479 NextBio:72419
ArrayExpress:Q5T1V6 Bgee:Q5T1V6 CleanEx:HS_DDX59
Genevestigator:Q5T1V6 Uniprot:Q5T1V6
Length = 619
Score = 415 (151.1 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 99/266 (37%), Positives = 154/266 (57%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
+ + + G+ V + F L E LN N+++ Y PTP+Q IP+ + GRD++A
Sbjct: 187 QQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILAS 246
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKF-S 247
A TGSGKTAAF P+I MR + S+T P ALIL PTREL+ QI +AK+ S
Sbjct: 247 ADTGSGKTAAFLLPVI---MRALFE-----SKT--PSALILTPTRELAIQIERQAKELMS 296
Query: 248 YQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEAD 307
+K V+ GG P+ QL L++ V +++ATPGRL+D+++++ V L ++ + +DEAD
Sbjct: 297 GLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEAD 356
Query: 308 RMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGS 367
ML MGF+ Q+ I++ + P QT+L SAT P I++LAS L N + + G
Sbjct: 357 TMLKMGFQQQVLDILENI----PNDCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNL 412
Query: 368 STDLIVQRVEFVHESDKRSHLMDLLH 393
+ Q + +V + K+ L ++L+
Sbjct: 413 PCANVRQIILWVEDPAKKKKLFEILN 438
Score = 309 (113.8 bits), Expect = 8.0e-27, P = 8.0e-27
Identities = 80/225 (35%), Positives = 129/225 (57%)
Query: 224 PLALILAPTRELSSQIHVEAKKF-SYQTGVKVVVAYGGAPINQQLRELERGVDILVATPG 282
P ALIL PTREL+ QI +AK+ S +K V+ GG P+ QL L++ V +++ATPG
Sbjct: 272 PSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPG 331
Query: 283 RLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATF 342
RL+D+++++ V L ++ + +DEAD ML MGF+ Q+ I++ + P QT+L SAT
Sbjct: 332 RLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENI----PNDCQTILVSATI 387
Query: 343 PKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHG 402
P I++LAS L N + + G + Q + +V + K+ L ++L N
Sbjct: 388 PTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVEDPAKKKKLFEIL-----NDKKL 442
Query: 403 KQALTLVFVETKKGADALEHWLY-MNGFPATTIHGDRTQ-QRTSI 445
+ LVFV+ K GAD L + + G + +IH +++Q +R +I
Sbjct: 443 FKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNI 487
>SGD|S000000441 [details] [associations]
symbol:PRP5 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000348 "mRNA branch
site recognition" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000000441 GO:GO:0005524
GO:GO:0005681 EMBL:BK006936 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GeneTree:ENSGT00610000086076 KO:K12811 HOGENOM:HOG000007229
GO:GO:0000348 OMA:SLVIIYN OrthoDB:EOG40CMR1 EMBL:M33191 EMBL:Z36106
EMBL:AY692817 PIR:A35791 RefSeq:NP_009796.1
ProteinModelPortal:P21372 SMR:P21372 DIP:DIP-88N IntAct:P21372
MINT:MINT-403988 STRING:P21372 PaxDb:P21372 EnsemblFungi:YBR237W
GeneID:852539 KEGG:sce:YBR237W CYGD:YBR237w NextBio:971604
Genevestigator:P21372 GermOnline:YBR237W Uniprot:P21372
Length = 849
Score = 418 (152.2 bits), Expect = 3.2e-38, P = 3.2e-38
Identities = 103/328 (31%), Positives = 174/328 (53%)
Query: 133 VETSGENVPPAVNTFAEIDLG-EALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQT 191
++ G P V ++++ L + + L + + TP+Q A+P + GRD++ ++T
Sbjct: 243 IKIKGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKT 302
Query: 192 GSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY-QT 250
GSGKT ++ P++ R+ QRP P+ LILAPTREL+ QIH E KF+ T
Sbjct: 303 GSGKTISYLLPLL----RQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADT 358
Query: 251 GVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL---ERARVSLQMIRYLALDEAD 307
++ V GG+ + +Q+ +L+RG +I+VATPGR +D+L + +S + I ++ +DEAD
Sbjct: 359 SIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEAD 418
Query: 308 RMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGS 367
R+ D+GFEPQI +I++ + P +Q +LFSATFP +++ A L + I + + G
Sbjct: 419 RLFDLGFEPQITQIMKTV-RPD---KQCVLFSATFPNKLRSFAVRVLHSPISITINSKGM 474
Query: 368 STDLIVQRVEFVHESDKR-SHLMDLLH--------AQVANG-----VHGKQALTLVFVET 413
+ + Q+ H D++ +L+ L+H Q N V A ++FV +
Sbjct: 475 VNENVKQKFRICHSEDEKFDNLVQLIHERSEFFDEVQSENDGQSSDVEEVDAKAIIFVSS 534
Query: 414 KKGADALEHWLYMNGFPATTIHGDRTQQ 441
+ D + L G IH + Q
Sbjct: 535 QNICDFISKKLLNAGIVTCAIHAGKPYQ 562
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 417 (151.9 bits), Expect = 3.7e-38, P = 3.7e-38
Identities = 112/330 (33%), Positives = 172/330 (52%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
ED V G +P + ++ E + + I + Y +PTP+QR AIPI + RD++
Sbjct: 378 EDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGV 437
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY 248
A+TGSGKT AF P++S I ++R P A+I+APTREL+ QI E KF
Sbjct: 438 AETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQG-PYAIIMAPTRELAQQIEEETTKFGQ 496
Query: 249 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 308
G++ VV GG +Q L G +I++ATPGRL+D+LE + L Y+ LDEADR
Sbjct: 497 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADR 556
Query: 309 MLDMGFEPQIRKIVQQM---DMPPPGMR---QTMLFSATFPKEIQRLASDFLANYIFLAV 362
M+DMGFEP ++KI++ M ++ P +T L + K+ R F A + AV
Sbjct: 557 MIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTAT-MPPAV 615
Query: 363 GRVGSSTDLIVQRVEFVHESDKRSHLMD-LLHAQVANGVHGK--QALT-------LVFVE 412
R+ + T L ++ K + + +++ N K + L+ ++FV
Sbjct: 616 ERL-ARTYLRRPATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEILSRKIDPPVIIFVN 674
Query: 413 TKKGADALEHWLYMNGFPATTIHGDRTQQR 442
KKGAD L L G+ + T+HG + Q++
Sbjct: 675 QKKGADVLAKGLEKLGYNSCTLHGGKGQEQ 704
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 409 (149.0 bits), Expect = 5.6e-38, P = 5.6e-38
Identities = 97/274 (35%), Positives = 152/274 (55%)
Query: 170 PVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALIL 229
P+Q+ + ++ GRD++ A+TG+GKT AF PII I++ + RG P L+L
Sbjct: 141 PIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKFN-AKHGRGKN---PQCLVL 196
Query: 230 APTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 289
APTREL+ Q+ E ++ + + + YGG PI QQ+REL G+D+ V TPGR++DL++
Sbjct: 197 APTRELARQVEKEFRESA--PSLDTICLYGGTPIGQQMRELNYGIDVAVGTPGRIIDLMK 254
Query: 290 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRL 349
R ++L ++++ LDEAD+ML +GF + I+Q++ P RQ+M+FSAT P I+ L
Sbjct: 255 RGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKL----PAKRQSMMFSATMPSWIRSL 310
Query: 350 ASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLV 409
+L N L + VG S + + + ++ V HGK +V
Sbjct: 311 TKKYLNNP--LTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKE--HGKGGKCIV 366
Query: 410 FVETKKGADALEHWLYMNGFPATTIHGDRTQ-QR 442
F +TK+ AD L L + +HGD +Q QR
Sbjct: 367 FTQTKRDADRLAFGL-AKSYKCEALHGDISQAQR 399
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 409 (149.0 bits), Expect = 5.9e-38, P = 5.9e-38
Identities = 120/359 (33%), Positives = 185/359 (51%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINF-DAYEDIPVETSGENV--------PPAVNT 146
D E ++ FG ++ EEE + + E + E S E + P +T
Sbjct: 71 DDEELALDGFGMGASKQEEEEEEEEEEVEVPEVKEVVEPEDSAEAIADFYEESSPQQTHT 130
Query: 147 -FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
F + L + I K+ KPTP+Q +IPI++ G+D++A AQTGSGKT A+ PII
Sbjct: 131 SFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPII- 189
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTG-VKVVVAYGGAPIN 264
E+ + +P S V +IL PTREL+ Q++ KK S+ + + +A GG +
Sbjct: 190 ----ERLLYKPSTSTKV----IILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLR 241
Query: 265 QQLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
QQ +L+ DI++ATPGRL+D + + S+Q I+ L +DEADRML+ GF+ ++ +I
Sbjct: 242 QQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEI-- 299
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ + P RQT+LFSAT IQ L L + + + S ++Q +FV
Sbjct: 300 -LSLIPKHKRQTLLFSATMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQ--QFVRIR- 355
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQR 442
KR L L Q+ GV + +VFV K+ A L L + G + +HG TQ++
Sbjct: 356 KRDQLKPALLYQLLKGVSSR---VVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQ 411
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 409 (149.0 bits), Expect = 5.9e-38, P = 5.9e-38
Identities = 120/359 (33%), Positives = 185/359 (51%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINF-DAYEDIPVETSGENV--------PPAVNT 146
D E ++ FG ++ EEE + + E + E S E + P +T
Sbjct: 71 DDEELALDGFGMGASKQEEEEEEEEEEVEVPEVKEVVEPEDSAEAIADFYEESSPQQTHT 130
Query: 147 -FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
F + L + I K+ KPTP+Q +IPI++ G+D++A AQTGSGKT A+ PII
Sbjct: 131 SFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPII- 189
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTG-VKVVVAYGGAPIN 264
E+ + +P S V +IL PTREL+ Q++ KK S+ + + +A GG +
Sbjct: 190 ----ERLLYKPSTSTKV----IILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLR 241
Query: 265 QQLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
QQ +L+ DI++ATPGRL+D + + S+Q I+ L +DEADRML+ GF+ ++ +I
Sbjct: 242 QQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEI-- 299
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ + P RQT+LFSAT IQ L L + + + S ++Q +FV
Sbjct: 300 -LSLIPKHKRQTLLFSATMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQ--QFVRIR- 355
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQR 442
KR L L Q+ GV + +VFV K+ A L L + G + +HG TQ++
Sbjct: 356 KRDQLKPALLYQLLKGVSSR---VVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQ 411
>ZFIN|ZDB-GENE-050208-665 [details] [associations]
symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
Uniprot:F1R8P9
Length = 584
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 107/319 (33%), Positives = 165/319 (51%)
Query: 130 DIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACA 189
++ + + G V V F L N++ Y PTPVQ +P+ + GRD++A A
Sbjct: 155 ELGIVSVGTEVCRPVIEFQHCRFPTVLERNLKAAGYEAPTPVQMQMVPVGLTGRDVIATA 214
Query: 190 QTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQ 249
TGSGKT AF P++ MR +Q S + P LIL PTREL+ QI +AK+
Sbjct: 215 DTGSGKTVAFLLPVV---MRA--LQSESASPSC-PACLILTPTRELAIQIEEQAKELMRG 268
Query: 250 T-GVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 308
++ + GG P+ QL L+ + I++ TPGRL+++L++ V L +R + +DEAD
Sbjct: 269 LPNMRTALLVGGMPLPPQLHRLKHNIKIVIGTPGRLLEILKQKAVQLDHVRTVVVDEADT 328
Query: 309 MLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSS 368
ML MGF+ Q+ I++Q+ P QT+L SAT P Q+LA + + + +G+
Sbjct: 329 MLKMGFQQQVLDILEQV----PEDHQTLLTSATIPTGTQQLAERLTHDPVTITIGQKNQP 384
Query: 369 TDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADAL-EHWLYMN 427
+ Q V +V E K+ L ++L+ + Q +VFV+ K GAD L E +
Sbjct: 385 CANVRQIVLWVEEPSKKKKLFEILNDEKLY-----QPPVVVFVDCKLGADLLCEAVQKVM 439
Query: 428 GFPATTIHGDRTQ-QRTSI 445
IH D+ Q +R I
Sbjct: 440 SLNTVAIHSDKMQWERNKI 458
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 105/303 (34%), Positives = 161/303 (53%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
+ TF E+ L ++L ++ + + TP+Q IP ++ G+D++ AQTG+GKTAAF P+
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 204 ISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
+ + + + + +G +++APTREL+ Q+ E K V+++ YGG I
Sbjct: 61 LDKV--DTHKESVQG--------IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDI 110
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
N+Q+R L++ I+V TPGR++D + R + LQ + + LDEAD ML+MGF I I+
Sbjct: 111 NRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ P QT+LFSAT P I+R+A F+ + V + I Q V E
Sbjct: 171 DV----PETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK 226
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QR 442
K L LL Q L +VF TK+ D L L + G+ A IHGD TQ +R
Sbjct: 227 KFDVLTRLLDIQ-------SPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKR 279
Query: 443 TSI 445
S+
Sbjct: 280 MSV 282
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 105/302 (34%), Positives = 153/302 (50%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TF + +L L I R + + TP+Q IP+ + +D++ AQTG+GKTAAF P++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
I E S + A+++APTREL+ Q+ E K KV+ YGG I +
Sbjct: 64 KINPE--------SPNIQ--AIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGR 113
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q+R L++ +I+V TPGRL+D + R + L + + +DEAD ML+MGF I I+ +
Sbjct: 114 QIRALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNV 173
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P QT+LFSAT P I+R+A F+ + V + I Q V E K
Sbjct: 174 ----PSEHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKF 229
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQRTSI 445
L LL Q L +VF TK+ D L L + G+ A IHGD TQ + +
Sbjct: 230 DTLTRLLDIQ-------SPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMV 282
Query: 446 EI 447
+
Sbjct: 283 AL 284
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 105/303 (34%), Positives = 161/303 (53%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
+ TF E+ L ++L ++ + + TP+Q IP ++ G+D++ AQTG+GKTAAF P+
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 204 ISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
+ + + + + +G +++APTREL+ Q+ E K V+++ YGG I
Sbjct: 61 LDKV--DTHKESVQG--------IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDI 110
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
N+Q+R L++ I+V TPGR++D + R + LQ + + LDEAD ML+MGF I I+
Sbjct: 111 NRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ P QT+LFSAT P I+R+A F+ + V + I Q V E
Sbjct: 171 DV----PETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK 226
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QR 442
K L LL Q L +VF TK+ D L L + G+ A IHGD TQ +R
Sbjct: 227 KFDVLTRLLDIQ-------SPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKR 279
Query: 443 TSI 445
S+
Sbjct: 280 MSV 282
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 105/303 (34%), Positives = 161/303 (53%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
+ TF E+ L ++L ++ + + TP+Q IP ++ G+D++ AQTG+GKTAAF P+
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 204 ISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
+ + + + + +G +++APTREL+ Q+ E K V+++ YGG I
Sbjct: 61 LDKV--DTHKESVQG--------IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDI 110
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
N+Q+R L++ I+V TPGR++D + R + LQ + + LDEAD ML+MGF I I+
Sbjct: 111 NRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ P QT+LFSAT P I+R+A F+ + V + I Q V E
Sbjct: 171 DV----PETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK 226
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QR 442
K L LL Q L +VF TK+ D L L + G+ A IHGD TQ +R
Sbjct: 227 KFDVLTRLLDIQ-------SPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKR 279
Query: 443 TSI 445
S+
Sbjct: 280 MSV 282
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 105/303 (34%), Positives = 161/303 (53%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
+ TF E+ L ++L ++ + + TP+Q IP ++ G+D++ AQTG+GKTAAF P+
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 204 ISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
+ + + + + +G +++APTREL+ Q+ E K V+++ YGG I
Sbjct: 61 LDKV--DTHKESVQG--------IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDI 110
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
N+Q+R L++ I+V TPGR++D + R + LQ + + LDEAD ML+MGF I I+
Sbjct: 111 NRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ P QT+LFSAT P I+R+A F+ + V + I Q V E
Sbjct: 171 DV----PETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK 226
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QR 442
K L LL Q L +VF TK+ D L L + G+ A IHGD TQ +R
Sbjct: 227 KFDVLTRLLDIQ-------SPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKR 279
Query: 443 TSI 445
S+
Sbjct: 280 MSV 282
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 105/303 (34%), Positives = 161/303 (53%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
+ TF E+ L ++L ++ + + TP+Q IP ++ G+D++ AQTG+GKTAAF P+
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 204 ISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
+ + + + + +G +++APTREL+ Q+ E K V+++ YGG I
Sbjct: 61 LDKV--DTHKESVQG--------IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDI 110
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
N+Q+R L++ I+V TPGR++D + R + LQ + + LDEAD ML+MGF I I+
Sbjct: 111 NRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ P QT+LFSAT P I+R+A F+ + V + I Q V E
Sbjct: 171 DV----PETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK 226
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QR 442
K L LL Q L +VF TK+ D L L + G+ A IHGD TQ +R
Sbjct: 227 KFDVLTRLLDIQ-------SPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKR 279
Query: 443 TSI 445
S+
Sbjct: 280 MSV 282
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 105/303 (34%), Positives = 161/303 (53%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
+ TF E+ L ++L ++ + + TP+Q IP ++ G+D++ AQTG+GKTAAF P+
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 204 ISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
+ + + + + +G +++APTREL+ Q+ E K V+++ YGG I
Sbjct: 61 LDKV--DTHKESVQG--------IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDI 110
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
N+Q+R L++ I+V TPGR++D + R + LQ + + LDEAD ML+MGF I I+
Sbjct: 111 NRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ P QT+LFSAT P I+R+A F+ + V + I Q V E
Sbjct: 171 DV----PETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK 226
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QR 442
K L LL Q L +VF TK+ D L L + G+ A IHGD TQ +R
Sbjct: 227 KFDVLTRLLDIQ-------SPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKR 279
Query: 443 TSI 445
S+
Sbjct: 280 MSV 282
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 105/303 (34%), Positives = 161/303 (53%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
+ TF E+ L ++L ++ + + TP+Q IP ++ G+D++ AQTG+GKTAAF P+
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 204 ISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
+ + + + + +G +++APTREL+ Q+ E K V+++ YGG I
Sbjct: 61 LDKV--DTHKESVQG--------IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDI 110
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
N+Q+R L++ I+V TPGR++D + R + LQ + + LDEAD ML+MGF I I+
Sbjct: 111 NRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ P QT+LFSAT P I+R+A F+ + V + I Q V E
Sbjct: 171 DV----PETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK 226
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-QR 442
K L LL Q L +VF TK+ D L L + G+ A IHGD TQ +R
Sbjct: 227 KFDVLTRLLDIQ-------SPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKR 279
Query: 443 TSI 445
S+
Sbjct: 280 MSV 282
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 112/304 (36%), Positives = 158/304 (51%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
+ FA ++L + + Y +P+ +Q+ +IPI + G D++ AQTG+GKTAAF PI
Sbjct: 5 IGGFAALELHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPI 64
Query: 204 ISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQT-GVKVVVAYGGAP 262
+ I P R P ALILAPTREL+ Q+ + ++ Q GV VV YGGAP
Sbjct: 65 LHRI-------DP-SKRE--PQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAP 114
Query: 263 INQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIV 322
+ QL+ + G I+VATPGRL D L R L + +L LDEAD ML +GF + I
Sbjct: 115 MGPQLKAIRNGAQIVVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIF 174
Query: 323 QQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHES 382
+ M P RQT+LFSAT P+ I+ +A L + + + + I Q VH
Sbjct: 175 KAM----PETRQTVLFSATLPQSIRAIAERHLKDPKHVKIQSKTQTVTAIEQAHLLVHAD 230
Query: 383 DKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ-Q 441
K S ++ LL V AL ++FV TK+ L L G+ A ++GD Q Q
Sbjct: 231 QKTSAVLSLLE------VEDFDAL-IMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQ 283
Query: 442 RTSI 445
R +
Sbjct: 284 RERV 287
WARNING: HSPs involving 610 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 448 408 0.00079 118 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 860
No. of states in DFA: 613 (65 KB)
Total size of DFA: 238 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.12u 0.07s 36.19t Elapsed: 00:00:11
Total cpu time: 36.20u 0.07s 36.27t Elapsed: 00:00:24
Start: Fri May 10 01:01:25 2013 End: Fri May 10 01:01:49 2013
WARNINGS ISSUED: 2