BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013195
(448 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P4Y0|CDKAL_XENTR Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Xenopus
tropicalis GN=cdkal1 PE=2 SV=1
Length = 553
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 245/457 (53%), Positives = 329/457 (71%), Gaps = 20/457 (4%)
Query: 1 MEDIEDLLAGSGGGGAPPGFRLPI--NAVGVNPKYNKNKPRLHDNHLSKTGSLSPKIPGT 58
++DIED+++ + P R N V K NKNK + + T IPGT
Sbjct: 9 LDDIEDIVSATD---PKPHDRQNARQNIVPRARKRNKNKIQEEEPPADST------IPGT 59
Query: 59 ETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLI 118
+ I+++T+GCSHN SD EYMAGQL+A+GY++T+ E+AD+WL+N+CTVKSP++ I
Sbjct: 60 QKIWIRTWGCSHNNSDGEYMAGQLAAYGYSITEQPEQADLWLLNSCTVKSPAEDHFRNSI 119
Query: 119 AKCKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLHRKK 178
K + A K +V++GCVPQ + ++G+SI+GVQQIDRVVEVVEET+KGH VRLL +KK
Sbjct: 120 KKAQEANKKVVLSGCVPQAQPRQEYMKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKK 179
Query: 179 LPA-------LDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
LDLPK+R+N +EI+ IN GCL ACTYCKTKHARG L SY VE LV R
Sbjct: 180 DNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGELASYPVEELVDRAA 239
Query: 232 TVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEH 291
+GV E+WL+SEDTGAYGRDIG +LP LL +V E+ P+G+ MLR+GMTNPP+ILEH
Sbjct: 240 QSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLV-EVIPEGA-MLRLGMTNPPYILEH 297
Query: 292 LKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATD 351
L+E+A++L HP VY+FLH+PVQS SD+VL M REY ++DF+ VVD L E VPG+ IATD
Sbjct: 298 LEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCIADFKRVVDFLKERVPGITIATD 357
Query: 352 IICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVPSAVVKKRSRELT 411
IICGFPGETDEDF +T+ L++EYKFP + I+QFYPRPGTPAA+M++VP+ V K+R++EL+
Sbjct: 358 IICGFPGETDEDFKETLKLVEEYKFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKELS 417
Query: 412 SVFEAFTPYLGMEGRVERIWITEIAADGIHLVRLEQF 448
+F +++PY G + + +TE + D + V +F
Sbjct: 418 QLFHSYSPYDHKIGEEQHVLVTEESFDSQYYVSHNRF 454
>sp|Q5VV42|CDKAL_HUMAN Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Homo
sapiens GN=CDKAL1 PE=1 SV=1
Length = 579
Score = 493 bits (1269), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/455 (52%), Positives = 326/455 (71%), Gaps = 13/455 (2%)
Query: 1 MEDIEDLLAGSGGGGAPPGFRLPINAVGVNPKYNKNKPRLHDNHLSKTGSLSPKIPGTET 60
++DIED+++ + P R + V PK + + + + IPG +
Sbjct: 10 LDDIEDIVSQED---SKPQDRHFVRK-DVVPKVRRRNTQKYLQEEENSPPSDSTIPGIQK 65
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
I+++T+GCSHN SD EYMAGQL+A+GY +T+N+ +AD+WL+N+CTVK+P++ I K
Sbjct: 66 IWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRNSIKK 125
Query: 121 CKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLHRKKLP 180
+ K +V+AGCVPQ L+G+SI+GVQQIDRVVEVVEET+KGH VRLL +KK
Sbjct: 126 AQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKKDN 185
Query: 181 A-------LDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTV 233
LDLPK+R+N +EI+ IN GCL ACTYCKTKHARG+L SY ++ LV R +
Sbjct: 186 GRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVDRAKQS 245
Query: 234 IADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLK 293
+GV E+WL+SEDTGAYGRDIG NLP LL +V E+ P+G+ MLR+GMTNPP+ILEHL+
Sbjct: 246 FQEGVCEIWLTSEDTGAYGRDIGTNLPTLLWKLV-EVIPEGA-MLRLGMTNPPYILEHLE 303
Query: 294 EIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDII 353
E+A++L HP VY+FLH+PVQS SD+VL M REY ++DF+ VVD L E VPG+ IATDII
Sbjct: 304 EMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDII 363
Query: 354 CGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVPSAVVKKRSRELTSV 413
CGFPGETD+DF +TV L++EYKFP + I+QFYPRPGTPAA+M++VP+ V K+R+++L+ V
Sbjct: 364 CGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKMEQVPAQVKKQRTKDLSRV 423
Query: 414 FEAFTPYLGMEGRVERIWITEIAADGIHLVRLEQF 448
F +++PY G +++ +TE + D V QF
Sbjct: 424 FHSYSPYDHKIGERQQVLVTEESFDSKFYVAHNQF 458
>sp|Q6NS26|CDKAL_XENLA Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Xenopus
laevis GN=cdkal1 PE=2 SV=1
Length = 556
Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/457 (53%), Positives = 327/457 (71%), Gaps = 20/457 (4%)
Query: 1 MEDIEDLLAGSGGGGAPPGFRLPI--NAVGVNPKYNKNKPRLHDNHLSKTGSLSPKIPGT 58
++DIED+++ + P R N V K NKN + + T IPGT
Sbjct: 9 LDDIEDMVSATD---PKPHDRQSARKNIVPRARKRNKNNIQEEEPPADST------IPGT 59
Query: 59 ETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLI 118
+ I+++T+GCSHN SD EYMAGQL+A+GY++T+ E+AD+WL+N+CTVKSP++ I
Sbjct: 60 QKIWIRTWGCSHNNSDGEYMAGQLAAYGYSITEQPEKADLWLLNSCTVKSPAEDHFRNSI 119
Query: 119 AKCKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLHRKK 178
K + A K +VV+GCVPQ ++G+SI+GVQQIDRVVEVVEET+KGH VRLL +KK
Sbjct: 120 KKAQEANKKVVVSGCVPQAQPRQDYMKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKK 179
Query: 179 LPA-------LDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
LDLPK+R+N +EI+ IN GCL ACTYCKTKHARG L SY VE LV R
Sbjct: 180 DNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGELASYPVEELVDRAT 239
Query: 232 TVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEH 291
+GV E+WL+SEDTGAYGRDIG +LP LL +V E+ P+G+ MLR+GMTNPP+ILEH
Sbjct: 240 QSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLV-EVIPEGA-MLRLGMTNPPYILEH 297
Query: 292 LKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATD 351
L+E+A++L HP VY+FLH+PVQS SD+VL M REY ++DF+ VVD L E VPG+ IATD
Sbjct: 298 LEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCIADFKRVVDFLKERVPGITIATD 357
Query: 352 IICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVPSAVVKKRSRELT 411
IICGFPGETDEDF +T+ L++EYKFP + I+QFYPRPGTPAA+M++V + V K+R++EL+
Sbjct: 358 IICGFPGETDEDFKETLKLVEEYKFPSLFINQFYPRPGTPAAKMEQVLAHVKKRRTKELS 417
Query: 412 SVFEAFTPYLGMEGRVERIWITEIAADGIHLVRLEQF 448
+F ++ PY G+ +++ +TE + D + V +F
Sbjct: 418 QLFHSYDPYDHKIGQKQQVLVTEESFDSQYYVAHNRF 454
>sp|Q91WE6|CDKAL_MOUSE Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Mus
musculus GN=Cdkal1 PE=2 SV=1
Length = 578
Score = 484 bits (1245), Expect = e-136, Method: Compositional matrix adjust.
Identities = 227/401 (56%), Positives = 304/401 (75%), Gaps = 9/401 (2%)
Query: 55 IPGTETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAM 114
IPG + I+++T+GCSHN SD EYMAGQL+A+GY +T+N+ +AD+WL+N+CTVK+P++
Sbjct: 59 IPGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHF 118
Query: 115 DTLIAKCKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 174
I K + K +V+AGCVPQ L+G+SI+GVQQIDRVVEVVEET+KGH VRLL
Sbjct: 119 RNSIKKAQEENKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLL 178
Query: 175 HRKKLPA-------LDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLV 227
+KK LDLPK+R+N +EI+ IN GCL ACTYCKTKHARG+L SY ++ LV
Sbjct: 179 GQKKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELV 238
Query: 228 GRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPF 287
R + +GV E+WL+SEDTGAYGRDIG +LP LL +V E+ P+G+ MLR+GMTNPP+
Sbjct: 239 ERAKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLV-EVIPEGA-MLRLGMTNPPY 296
Query: 288 ILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQ 347
ILEHL+E+A++L HP VY+FLH+PVQS SD+VL M REY ++DF+ VVD L E VPG+
Sbjct: 297 ILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKVPGIT 356
Query: 348 IATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVPSAVVKKRS 407
IATDIICGFPGETD+DF +TV L++EYKFP + I+QFYPRPGTPAA+ ++VP+ V K+R+
Sbjct: 357 IATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKAEQVPAHVKKQRT 416
Query: 408 RELTSVFEAFTPYLGMEGRVERIWITEIAADGIHLVRLEQF 448
++L+ VF ++ PY G +++ +TE + D V +F
Sbjct: 417 KDLSRVFHSYNPYDHKIGERQQVLVTEESFDSKFYVAHNRF 457
>sp|Q6PG34|CDKAL_DANRE Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Danio
rerio GN=cdkal1 PE=2 SV=1
Length = 547
Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/419 (53%), Positives = 301/419 (71%), Gaps = 9/419 (2%)
Query: 37 KPRLHDNHLSKTGSLSPKIPGTETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEA 96
+ R H + IPG + +++KT+GCSHN SD EYMAGQL+ GY +T++S +A
Sbjct: 37 RARKHKQETGEQMQTDSVIPGMQKVWLKTWGCSHNSSDGEYMAGQLAVAGYQITEDSSDA 96
Query: 97 DIWLINTCTVKSPSQSAMDTLIAKCKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQID 156
D+WL+N+CTVKSP++ I K + K +V+AGCVPQ + ++ +SI+GVQQID
Sbjct: 97 DLWLLNSCTVKSPAEDHFRNAIRKAQEQNKKVVLAGCVPQAQPRMDYIKDLSIIGVQQID 156
Query: 157 RVVEVVEETLKGHEVRLLHRKKLPA-------LDLPKVRRNKFVEILPINVGCLGACTYC 209
RVVEVV+E +KGH VRLL +KK LDLPK+R+N +EI+ IN GCL ACTYC
Sbjct: 157 RVVEVVDEAIKGHSVRLLGQKKEKGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYC 216
Query: 210 KTKHARGHLGSYTVESLVGRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAE 269
KTKHARG L SY VE LV RVR +GV E+WL+SEDTGAYGRDIG +LP LL +V E
Sbjct: 217 KTKHARGDLASYPVEELVERVRQSFQEGVCEIWLTSEDTGAYGRDIGSDLPTLLWRLVEE 276
Query: 270 LPPDGSTMLRIGMTNPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTL 329
+P MLR+GMTNPP+ILEHL+E++ +L+HP V+SFLHVP+QS SD+VL M REY
Sbjct: 277 IPE--GAMLRLGMTNPPYILEHLEEMSRILQHPRVFSFLHVPLQSASDSVLMEMRREYCC 334
Query: 330 SDFRTVVDTLIELVPGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
+DF +VD L E VPG+ IATDIICGFPGETDEDF QT+ L++ Y+FP + I+QFYPRPG
Sbjct: 335 ADFTHLVDYLKERVPGITIATDIICGFPGETDEDFEQTLALVRRYRFPSLFINQFYPRPG 394
Query: 390 TPAARMKKVPSAVVKKRSRELTSVFEAFTPYLGMEGRVERIWITEIAADGIHLVRLEQF 448
TPAA M+++P+ V K+R++EL+++F ++ PY G +++ +TE + D + V +F
Sbjct: 395 TPAALMQQLPAHVKKQRTKELSALFHSYRPYDHKMGEQQQVLVTEESFDSQYYVAHNKF 453
>sp|Q7K4W1|CDKAL_DROME Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Drosophila
melanogaster GN=CG6550 PE=2 SV=1
Length = 552
Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/397 (57%), Positives = 289/397 (72%), Gaps = 11/397 (2%)
Query: 55 IPGTETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAM 114
IPGT+ +++KT+GC+HN SDSEYMAGQL+A+GY L+ EEAD+WL+N+CTVK+PS+
Sbjct: 67 IPGTQKVFVKTWGCAHNNSDSEYMAGQLAAYGYRLS-GKEEADLWLLNSCTVKNPSEDTF 125
Query: 115 DTLIAKCKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 174
I K +VVAGCVPQG+ L G+S++GVQQIDRVVEVVEETLKGH V+LL
Sbjct: 126 RNEIESGMRNGKHVVVAGCVPQGAPKSDYLNGLSVIGVQQIDRVVEVVEETLKGHSVQLL 185
Query: 175 HRKKL--------PALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESL 226
KK L LPKVR+N +EI+ IN GCL CTYCKTKHARG L SY E +
Sbjct: 186 QNKKKVHGRRVAGAPLSLPKVRKNPLIEIISINSGCLNQCTYCKTKHARGDLASYPPEEV 245
Query: 227 VGRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPP 286
V R R A+G E+WL+SEDTGAYGRDIG +LP LL +V +P MLR+GMTNPP
Sbjct: 246 VERARQSFAEGCCEIWLTSEDTGAYGRDIGSSLPELLWQLVEVIPE--HCMLRVGMTNPP 303
Query: 287 FILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGM 346
+ILEHL+E+A VL+HP VYSFLHVPVQSGSD+VL M REY DF VVD L E VPG+
Sbjct: 304 YILEHLEEVANVLQHPRVYSFLHVPVQSGSDSVLGEMKREYCRQDFEHVVDFLRERVPGV 363
Query: 347 QIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVPSAVVKKR 406
IATDIICGFP ET++DF +T+ L +Y+FP + I+QF+PRPGTPAA+M ++P+ +VKKR
Sbjct: 364 TIATDIICGFPTETEDDFEETMTLCAKYRFPSLFINQFFPRPGTPAAKMDRIPANLVKKR 423
Query: 407 SRELTSVFEAFTPYLGMEGRVERIWITEIAADGIHLV 443
++ LT +F ++ PY G + + +TE++ D +H V
Sbjct: 424 TKRLTDLFYSYEPYADRVGEIYTVLVTEVSHDKLHYV 460
>sp|Q291H5|CDKAL_DROPS Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Drosophila
pseudoobscura pseudoobscura GN=GA19679 PE=3 SV=1
Length = 553
Score = 456 bits (1174), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/396 (57%), Positives = 292/396 (73%), Gaps = 10/396 (2%)
Query: 55 IPGTETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAM 114
IPGT+ +++KT+GC+HN SDSEYMAGQL+A+GY L+ +EAD+WL+N+CTVK+PS+
Sbjct: 68 IPGTQKVFVKTWGCAHNNSDSEYMAGQLAAYGYKLS-GKDEADLWLLNSCTVKNPSEDTF 126
Query: 115 DTLIAKCKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 174
I S K +VVAGCVPQG+ L G+S++GVQQIDRVVEVVEETLKGH VRLL
Sbjct: 127 RNEIESGMSNGKHIVVAGCVPQGAPKSDYLRGLSVIGVQQIDRVVEVVEETLKGHSVRLL 186
Query: 175 HRKKLPA-------LDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLV 227
KK+ L LPKVR+N +EI+ IN GCL CTYCKTKHARG L SY E +V
Sbjct: 187 QNKKVHGRRVAGAPLSLPKVRKNPLIEIISINTGCLNQCTYCKTKHARGDLASYPPEEIV 246
Query: 228 GRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPF 287
R R A+G E+WL+SEDTGAYGRDIG +LP LL +V +P MLR+GMTNPP+
Sbjct: 247 DRARQSFAEGCCEIWLTSEDTGAYGRDIGSSLPELLWKLVEVIPE--HCMLRVGMTNPPY 304
Query: 288 ILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQ 347
ILEHL+E+A+VL+HP VY+FLHVPVQSGSD+VL M REY DF VVD L E VPG+
Sbjct: 305 ILEHLEEVAKVLQHPRVYAFLHVPVQSGSDSVLGEMKREYCRKDFEHVVDFLRERVPGVT 364
Query: 348 IATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVPSAVVKKRS 407
IATDIICGFP ET+EDF +T+ L Y+FP + I+QF+PRPGTPAA+M+++P+ +VKKR+
Sbjct: 365 IATDIICGFPTETEEDFEETMTLCGRYRFPSLFINQFFPRPGTPAAKMERIPANLVKKRT 424
Query: 408 RELTSVFEAFTPYLGMEGRVERIWITEIAADGIHLV 443
+ LT +F ++ PY G + + +TEI+ D +H V
Sbjct: 425 KRLTDLFYSYEPYAQRVGEMYTVLVTEISHDKLHYV 460
>sp|Q8MXQ7|CDKAL_CAEEL Threonylcarbamoyladenosine tRNA methylthiotransferase
OS=Caenorhabditis elegans GN=Y92H12BL.1 PE=3 SV=2
Length = 425
Score = 343 bits (880), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 170/315 (53%), Positives = 231/315 (73%), Gaps = 5/315 (1%)
Query: 130 VAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLHRKKLPA-LDLPKVR 188
+AGCV Q + L+ VSIVGV+QIDR+VEVV ETLKG++VRLL R + A L LPK+R
Sbjct: 1 MAGCVSQAAPSEPWLQNVSIVGVKQIDRIVEVVGETLKGNKVRLLTRNRPDAVLSLPKMR 60
Query: 189 RNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTVIAD-GVKEVWLSSED 247
+N+ +E+L I+ GCL CTYCKTK ARG L SY + LV + R D GVKE+WL+SED
Sbjct: 61 KNELIEVLSISTGCLNNCTYCKTKMARGDLVSYPLADLVEQARAAFHDEGVKELWLTSED 120
Query: 248 TGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLKEIAEVLRHPCVYSF 307
GA+GRDIG+ LP LL +V ++ PDGS M+R+GMTNPP+IL+HL+EIAE+L HP VY+F
Sbjct: 121 LGAWGRDIGLVLPDLLRELV-KVIPDGS-MMRLGMTNPPYILDHLEEIAEILNHPKVYAF 178
Query: 308 LHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDIICGFPGETDEDFNQT 367
LH+PVQS SDAVL+ M REY+ F + D +I VP + IATD+I FP ET EDF ++
Sbjct: 179 LHIPVQSASDAVLNDMKREYSRRHFEQIADYMIANVPNIYIATDMILAFPTETLEDFEES 238
Query: 368 VNLIKEYKFPQVHISQFYPRPGTPAARMKKVPSAVVKKRSRELTSVFEAFTPYLGME-GR 426
+ L+++YKFP + I+Q+YPR GTPAAR+KK+ + +KR+ ++ +F ++T Y G
Sbjct: 239 MELVRKYKFPSLFINQYYPRSGTPAARLKKIDTVEARKRTAAMSELFRSYTRYTDERIGE 298
Query: 427 VERIWITEIAADGIH 441
+ R+ +TE+AAD +H
Sbjct: 299 LHRVLVTEVAADKLH 313
>sp|O59545|AMTAB_PYRHO Probable threonylcarbamoyladenosine tRNA methylthiotransferase
OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428
/ JCM 9974 / NBRC 100139 / OT-3) GN=PH1875 PE=3 SV=2
Length = 425
Score = 289 bits (739), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 229/375 (61%), Gaps = 11/375 (2%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
+Y++ +GC+ N++D E MA L G+ + ++ EE++I ++N+C VK P++ + I +
Sbjct: 4 VYIENYGCARNRADGEIMAALLYLSGHEIVESPEESEIVVVNSCAVKDPTERKIARRIRE 63
Query: 121 CKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHE---VRLLHRK 177
K ++V GC+P + D+ + +I+GV+ IDR+V+ VE ++G + V ++
Sbjct: 64 LLDNGKKVIVTGCLPHVNPDVIDERVSAILGVKSIDRIVQAVEYAMRGEKLISVPDWKKR 123
Query: 178 KLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTVIADG 237
L LD P++ ILPI GCL ACTYC T+ ARG L SY+ E ++G V+ I G
Sbjct: 124 NLDKLDFPRLSPRNVYFILPIAEGCLNACTYCATRLARGVLKSYSPEKIIGWVKWAIKQG 183
Query: 238 VKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLKEIAE 297
KE+WLS+EDTG YG DIG NL L++ I A +G +R+GM NP +L+ L E+ +
Sbjct: 184 YKEIWLSAEDTGCYGFDIGTNLAKLIDEITA---IEGEFRIRVGMMNPNHVLKFLDELID 240
Query: 298 VLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDIICGFP 357
+ VY FLH+PVQSG + +L M R YT+ +F +V P + + TDII GFP
Sbjct: 241 AYKDEKVYKFLHLPVQSGDNEILRKMGRMYTVEEFEEIVKAFRREFPELNLHTDIIVGFP 300
Query: 358 GETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVPSAVVKKRSRELTSV---- 413
GE++E F ++V LIK + +V++S++ PRPGT AA+ K++P VVK+RSR L +
Sbjct: 301 GESEEAFQRSVELIKRIRPDKVNVSRYSPRPGTIAAKWKQLPGWVVKERSRLLHRIRLQI 360
Query: 414 -FEAFTPYLGMEGRV 427
+E Y+G + +V
Sbjct: 361 SYEINRKYIGKKVKV 375
>sp|Q9UXX9|AMTAB_PYRAB Probable threonylcarbamoyladenosine tRNA methylthiotransferase
OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=PYRAB17290
PE=3 SV=1
Length = 425
Score = 288 bits (736), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 224/370 (60%), Gaps = 11/370 (2%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
IY++ +GC+ N++D E MA L G+ + + +E +I ++N+C VK P++ + I +
Sbjct: 4 IYIENYGCARNRADGEIMAALLHLAGHEIVYDPDEGEIVVVNSCAVKDPTERKIARRIKE 63
Query: 121 CKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHE---VRLLHRK 177
+ K ++V GC+P + D+ + I+GV+ IDR+++ VE L+G + V ++
Sbjct: 64 LLDSGKKVIVTGCLPHVNPDVIDERVSGILGVKSIDRIIQAVEYALRGEKLISVPDWRKR 123
Query: 178 KLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTVIADG 237
L LD P++ I+PI GCL ACTYC T+ ARG L SY+ E +VG V+ I G
Sbjct: 124 NLDKLDFPRLSPRTVYFIVPIAEGCLNACTYCATRFARGVLKSYSPEKIVGWVKWAIKQG 183
Query: 238 VKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLKEIAE 297
KE+WLS+EDTG YG DIG NL LL+ I A +G +R+GM NP +L+ L E+ E
Sbjct: 184 YKEIWLSAEDTGCYGFDIGTNLAKLLDEITA---IEGEFRVRVGMMNPNHVLKFLDELIE 240
Query: 298 VLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDIICGFP 357
+ +Y FLH+PVQSG + +L M R YT+ +F +V + P + + TDII GFP
Sbjct: 241 AYQDEKIYKFLHLPVQSGDNDILRRMGRNYTVEEFEEIVKEFRKKFPDLNLHTDIIVGFP 300
Query: 358 GETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVPSAVVKKRSRELTSV---- 413
GE DE F ++V LI+ + +V++S++ PRPGT AA+ K++P +VK+RSR L +
Sbjct: 301 GEDDEAFQRSVELIRRIRPDKVNVSRYSPRPGTIAAKWKQLPGWIVKERSRLLHRIRLQI 360
Query: 414 -FEAFTPYLG 422
+E Y+G
Sbjct: 361 SYEINQKYIG 370
>sp|O26914|AMTAB_METTH Probable threonylcarbamoyladenosine tRNA methylthiotransferase
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=MTH_826 PE=3 SV=1
Length = 424
Score = 238 bits (607), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 210/356 (58%), Gaps = 12/356 (3%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
+Y++TFGC+ NQ+DSE MAG L G LT ++AD+ +INTC VK P++ + I K
Sbjct: 6 VYIETFGCTFNQADSEIMAGVLREEGAVLT-GIDDADVIIINTCYVKHPTEHKVINRIKK 64
Query: 121 CKSA--KKPLVVAGCVPQGSRDLKELEGVS----IVGVQQIDRVVEVVEETLKGHEVRLL 174
+ +K LVVAGC+ + D +LE +S +G Q+ R + V G R+
Sbjct: 65 IQETYPEKGLVVAGCMVE--IDPSKLEAISGDASWLGPHQLRRAPQAVRAASNGLVERIT 122
Query: 175 HRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTVI 234
+ +P+VR N + I+PI GC G+C+YC T+ ARG + SY + ++ R +
Sbjct: 123 GFTSDVKVKVPRVRSNPLIHIIPICEGCNGSCSYCCTRFARGRIQSYPSDLIISEAREAV 182
Query: 235 ADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLKE 294
A G +E+ L+++DT AYG D G L ++ I + +P G+ +R+GM +P +L L
Sbjct: 183 ASGCREIQLTAQDTAAYGVDTGEKLSDIIKGI-SGIP--GNFRIRVGMMHPASVLRDLDG 239
Query: 295 IAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDIIC 354
+ E + VYSFLH+PVQSGSD+VL+ M R +T+ +FR +V+ +P + IATDII
Sbjct: 240 LVEAFKSEKVYSFLHLPVQSGSDSVLADMERGHTVDEFRMIVERFRSEIPDISIATDIIV 299
Query: 355 GFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVPSAVVKKRSREL 410
G+P E EDF T +L++E K +H+S++ RP ++ + ++ +++RSR L
Sbjct: 300 GYPTEEREDFMDTCSLLEEVKPSFIHLSKYRHRPRARSSSLDEIDFRELRRRSRAL 355
>sp|O29021|AMTAB_ARCFU Probable threonylcarbamoyladenosine tRNA methylthiotransferase
OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 /
DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_1247 PE=3 SV=2
Length = 424
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 135/399 (33%), Positives = 225/399 (56%), Gaps = 23/399 (5%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
+ ++T+GC+ NQ+DS+ M G LS G + E+A++ +IN+C V ++ + +
Sbjct: 3 VAIETYGCTTNQADSDIMRGFLS--GEFELSSVEDAEVVIINSCGVIDFTERKIIRRMLD 60
Query: 121 CKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGH----EVRLLHR 176
K K +V+AGC+ + S++ + S + +D VV+ V L G E R + +
Sbjct: 61 LKREGKKVVLAGCLTRISKEALSVAD-SALSPDNLDMVVDAVYSALNGRKLFTERRFIDK 119
Query: 177 KKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTVIAD 236
+ L ++R N + I+ I+ GCLG C++C TK ARG L S++++++V +
Sbjct: 120 AEFSHLKC-RLRENA-IAIVSISEGCLGKCSFCATKFARGRLRSFSMDAIVREAERAVRA 177
Query: 237 GVKEVWLSSEDTGAYGRDIG-VNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLKEI 295
G +E+ L+S+DTGAYG D G LP LL I +E+ +G +R+GM NP + L E+
Sbjct: 178 GYREIQLTSQDTGAYGMDKGRAMLPELLRKI-SEI--EGEFRVRVGMMNPQHAVRMLDEL 234
Query: 296 AEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDIICG 355
+Y FLH+PVQSG + +L M R +T+ D+ VV+ + I+TDII G
Sbjct: 235 INAYSSEKIYKFLHIPVQSGDNRILEDMKRNHTVEDYVEVVEAFRNSFDDVLISTDIIVG 294
Query: 356 FPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVPSAVVKKRSRELTSVFE 415
FP ET+E F ++ LIKE + V+I+++ R GTPAAR++ +P + K+RSR+LT +
Sbjct: 295 FPTETEEAFWKSYELIKETRPDIVNITRYSARKGTPAARLRDIPGWIKKERSRKLTDLMR 354
Query: 416 AFTPYLGME------GRVERIWITEIAADGIHLVRLEQF 448
+G+E G+ R+ +T+ +G +L R+ +
Sbjct: 355 K----IGLENNKRFVGKKLRVLVTKEGKNGRNLARMNSY 389
>sp|Q58277|AMTAB_METJA Probable threonylcarbamoyladenosine tRNA methylthiotransferase
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0867
PE=3 SV=1
Length = 427
Score = 215 bits (548), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 202/360 (56%), Gaps = 17/360 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
+Y++ +GC N +D+E + L G+ + +N EEADI +INTC V+ +++ M I +
Sbjct: 14 VYVEGYGCVLNTADTEIIKNSLKKHGFEVVNNLEEADIAIINTCVVRLETENRMIYRINE 73
Query: 121 CKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLHRKKLP 180
K+ K +VVAGC+P+ ++ +++G + ++ + E+++ ++ H +R
Sbjct: 74 LKNLGKEVVVAGCLPKALKN--KVKGFLHIYPREAHKAGEILKNYVEKH-----YRMPYI 126
Query: 181 ALDLPKVRRNKF-------VEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTV 233
D+ K K + LPI GC+G C+YC K ARG L SY E +V + + +
Sbjct: 127 EEDINKTLYKKLDYLKPSLITPLPICEGCIGNCSYCIVKIARGGLISYPREKIVNKAKEL 186
Query: 234 IADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLK 293
I G K + ++++DT YG DIG NL LLN + G ++R+GM + L
Sbjct: 187 INKGAKCLLITAQDTACYGFDIGDNLANLLNELT---QIKGEFIMRVGMMHAKNAELILD 243
Query: 294 EIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDII 353
E+ EV ++ V FLH+P+QSG D +L M R YT+ +F+ +V+ + + TDII
Sbjct: 244 ELIEVYQNEKVGKFLHLPLQSGDDEILKRMKRGYTVDEFKDIVNEFRRKIKNLCFTTDII 303
Query: 354 CGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVPSAVVKKRSRELTSV 413
GFPGET+E F T+ +++E K +H +++ R GT AA+MK++ + + K+RS L +
Sbjct: 304 VGFPGETEEQFQNTLEVLRELKPDYIHGAKYSQRKGTEAAKMKQIDTKIRKRRSEILDKL 363
>sp|Q7NE65|MIAB_GLOVI (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Gloeobacter violaceus (strain PCC 7421) GN=miaB PE=3
SV=1
Length = 441
Score = 202 bits (515), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 207/395 (52%), Gaps = 26/395 (6%)
Query: 56 PGTETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMD 115
P +T + TFGC N++DSE MAG L+ GY + D S+ AD+ L NTCT++ ++ +
Sbjct: 7 PQGKTACLVTFGCQMNKADSERMAGALTHLGYRIVDESDTADLVLFNTCTIRDNAEQKVY 66
Query: 116 TLIAKCKSAKK-----PLVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLK 167
+ + + K+ LV+AGCV Q G + L+ + + +V G Q ++R+ +++E +
Sbjct: 67 SYLGQQARRKQRDPHITLVLAGCVAQQEGEKLLRRVPELDLVMGPQHVNRLSDLLERVAE 126
Query: 168 GHEVRLLHRKKLPAL-DLPKVRRNKFVEILP-INVGCLGACTYCKTKHARGHLGSYTVES 225
G +V + + + L D+ K RR+ V I GC CTYC RG S T E+
Sbjct: 127 GEQV--VATEPIEILEDITKPRRDSAVTAWANIIYGCNEGCTYCIVPSVRGREQSRTPEA 184
Query: 226 LVGRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNP 285
+ + + A G KEV L ++ AYGRDIG NL LL + P G LR ++P
Sbjct: 185 IKAEICELGASGYKEVTLLGQNIDAYGRDIGTNLASLLR-FIHNAP--GIERLRFATSHP 241
Query: 286 PFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPG 345
+ + L IA P V H+P QSG + VL M R YT +R +++ + ++P
Sbjct: 242 RYFSDEL--IATCAELPKVCEHFHIPFQSGDNEVLRRMARGYTHEKYRAIIEKIRAILPD 299
Query: 346 MQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVPSAVVK- 404
I+ D+I GFPGET+ F ++ L+ E +F ++ + + PRPGTPAAR VK
Sbjct: 300 AAISADLIVGFPGETEAQFENSLRLVDELEFDALNTAAYSPRPGTPAARWPGQLDDEVKQ 359
Query: 405 ---KRSRELTS--VFEAFTPYLGMEGRVERIWITE 434
+R+ L + FE YL GR E++ + E
Sbjct: 360 DRLQRTNRLVAQKAFERSQRYL---GRTEQVLVEE 391
>sp|B2V930|MIAB_SULSY (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=miaB
PE=3 SV=1
Length = 437
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 137/392 (34%), Positives = 214/392 (54%), Gaps = 23/392 (5%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y+KTFGC N +DSE MAG L GY T+N EEAD+ L+NTC+V+ + + + +
Sbjct: 3 FYIKTFGCQMNVNDSEKMAGILQTLGYTPTENWEEADVILVNTCSVREKPDQKVLSALGE 62
Query: 121 CKSAKKP-----LVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE-V 171
K KK + V GC+ Q G ++ + IV G I + ++EE G++ +
Sbjct: 63 FKKVKKHNPNAVIGVCGCLAQRAGYEIYQKAPFIDIVFGTTNIHHLPNLLEEAKSGNKAI 122
Query: 172 RLLHR--KKLPALD-LPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
+L + LD P VR NK+ + + GC CTYC RG S + ++
Sbjct: 123 EILEEIDENENLLDQFPTVRENKYTAFVTVIRGCDKKCTYCIVPTTRGRERSRRIGDILR 182
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIG-VNLPILLNAIVAELPPDGSTMLRIGMTNPPF 287
V+ ++ DGVKE+ L ++ AYG+D G V LL A VAE+ DG +R +P
Sbjct: 183 EVQYLVEDGVKEIHLIGQNVTAYGKDFGDVKFWELLKA-VAEV--DGVERIRFTTGHPRD 239
Query: 288 ILEH-LKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGM 346
+ E +K +A++ P + LH+P+Q+GSD +L AM+R YT ++ ++ L + +P +
Sbjct: 240 LDEDTIKVMADL---PQICEALHLPIQAGSDRILQAMDRGYTQKEYLQKIELLKKYIPNI 296
Query: 347 QIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVPS-AVVKK 405
++TDII GFPGET ED+ +TV +IKE ++ QV ++ PRPGTPAA + S + K
Sbjct: 297 ALSTDIIVGFPGETYEDYLETVKVIKEVEYDQVFAFKYSPRPGTPAADLPMTESPEELSK 356
Query: 406 RSRELTSVFE--AFTPYLGMEGRVERIWITEI 435
R +L ++ + F L + ++ I + EI
Sbjct: 357 RLNDLINLQKDITFKKNLEYQDKIVEILVEEI 388
>sp|O66638|MIAB_AQUAE (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB OS=Aquifex
aeolicus (strain VF5) GN=miaB PE=3 SV=1
Length = 440
Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 216/394 (54%), Gaps = 22/394 (5%)
Query: 58 TETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKS-PSQSAMDT 116
++ ++KTFGC N +DSE + G L GY TDN EEAD+ ++NTCT++ P Q +
Sbjct: 2 SKKFFIKTFGCQMNFNDSERIRGLLKTIGYEQTDNWEEADLIILNTCTIREKPDQKVLSH 61
Query: 117 L----IAKCKSAKKPLVVAGCVPQ--GSRDLKELEGVSIVGVQ-QIDRVVEVVEETLKGH 169
L K K+ K + VAGC+ Q G +K+ + I+ + ++ E++ + G+
Sbjct: 62 LGEYKKIKEKNPKALIAVAGCLAQRTGWELVKKAPVIDIMFSSFNMHQLPELINQAQAGY 121
Query: 170 E----VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVES 225
+ + L + + + P R NK+ + I GC CTYC RG S + S
Sbjct: 122 KAIAILDELPQDEDKIWEYPVERDNKYCAYVTIIKGCDKNCTYCVVPRTRGKERSRALHS 181
Query: 226 LVGRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPP-DGSTMLRIGMTN 284
++ V+ ++ DGV+E+ L ++ A+G+D PI + ++ ++ DG +R +
Sbjct: 182 ILDEVKRLVDDGVREIHLLGQNVTAWGKDF--EKPIPFSELLYQVSKIDGVERIRFTTGH 239
Query: 285 PPFILEHLKE-IAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELV 343
P + + + E +A++ P V + LH+P Q+GS+ +L+ M+R YT ++ ++ L E V
Sbjct: 240 PRDLTDDIIEAMADI---PQVCNALHLPFQAGSNRILALMDRGYTKEEYLEKIEKLKEKV 296
Query: 344 PGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAV 402
+ ++TD+I GFP ET+EDF T++++K+ +F QV +F PRPGTPAA M+ ++P V
Sbjct: 297 KDIAMSTDVIVGFPTETEEDFEHTLDVLKKVRFEQVFSFKFSPRPGTPAAEMEGQIPDDV 356
Query: 403 VKKRSRELTSVFEAFTPYLG--MEGRVERIWITE 434
+R R L + ++ + EG V+ + + E
Sbjct: 357 KTERMRRLLELQKSILSEIAKKYEGTVQEVLVEE 390
>sp|Q65JE5|MIAB_BACLD (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580)
GN=miaB PE=3 SV=1
Length = 509
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 194/366 (53%), Gaps = 16/366 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG A GY TD++E+A++ L+NTC ++ +++ + I
Sbjct: 68 FYIRTYGCQMNEHDTEVMAGIFMALGYEPTDSTEDANVILLNTCAIRENAENKVFGEIGH 127
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
K+ KK L V GC+ Q +R LK+ V ++ G I R+ E++ E E
Sbjct: 128 LKALKKDNPDLILGVCGCMSQEESVVNRILKKHPFVDLIFGTHNIHRLPELLSEAYLSKE 187
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
+ + ++ +LPKVR K + I GC CTYC + RG S E ++
Sbjct: 188 MVIEVWSKEGDVIENLPKVRTGKIKGWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQ 247
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
VR + A+G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 248 EVRRLAAEGYKEITLLGQNVNAYGKDFE-DMEYGLGHLMDELRKIDIPRIRFTTSHPRDF 306
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+HL E+ + + + +H+PVQSGS VL M R+Y + +V + + +P +
Sbjct: 307 DDHLIEV--LAKGGNLLDHIHLPVQSGSSDVLKLMARKYDRERYLELVAKIKKAMPNASL 364
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVKKRS 407
TDII GFP ETDE F +T++L +E +F + + PR GTPAA+MK VP V K+R
Sbjct: 365 TTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIYSPREGTPAAKMKDNVPMRVKKERL 424
Query: 408 RELTSV 413
+ L V
Sbjct: 425 QRLNEV 430
>sp|Q9WZT7|MTAB_THEMA Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB
OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM
3109 / JCM 10099) GN=mtaB PE=3 SV=1
Length = 434
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 195/356 (54%), Gaps = 17/356 (4%)
Query: 59 ETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLI 118
+T+ ++TFGC NQ +SEYMA QL GY + + A +++N+C V + + LI
Sbjct: 2 KTVRIETFGCKVNQYESEYMAEQLEKAGYVVLPDGNAA-YYIVNSCAVTKEVEKKVKRLI 60
Query: 119 AKCKSAKK--PLVVAGCVPQGSRD-LKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLH 175
++ K +++ GC Q S D K L ++G+ + +V+ + +L G + ++
Sbjct: 61 KSIRNRNKNAKIILTGCFAQLSPDEAKNLPVDMVLGIDEKKHIVDHIN-SLNGKQQVVVS 119
Query: 176 RKKLPALDLPKVR---RNKFVEILPINVGCLGACTYCKTKHARG-HLGSYTVESLVGRVR 231
P + KV+ ++ + + GC CTYC + ARG + S +E
Sbjct: 120 EPGRPVYE--KVKGSFEDRTRSYIKVEDGCDNTCTYCAIRLARGTRIRSKPLEIFKEEFA 177
Query: 232 TVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEH 291
++ G KE+ ++ + G YG+D+G +L LL ++ ++P G +R+ N + +
Sbjct: 178 EMVMKGYKEIVITGVNLGKYGKDMGSSLAELLK-VIEKVP--GDYRVRLSSINVEDVNDE 234
Query: 292 LKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATD 351
+ + R+P + LH+ VQSGSD VL M R+Y +SDF VVD L + P I TD
Sbjct: 235 I--VKAFKRNPRLCPHLHISVQSGSDDVLKRMGRKYKISDFMRVVDKLRSIDPDFSITTD 292
Query: 352 IICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVKKR 406
II GFPGETD DF +T+ L+++ +F +VHI +F PRPGTPA+RM+ VP + K+R
Sbjct: 293 IIVGFPGETDADFQRTLELVEKVEFSRVHIFRFSPRPGTPASRMEGGVPESKKKER 348
>sp|Q7V8L8|MIAB_PROMM (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Prochlorococcus marinus (strain MIT 9313) GN=miaB
PE=3 SV=1
Length = 480
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 209/408 (51%), Gaps = 28/408 (6%)
Query: 60 TIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA 119
+ +++TFGC N++DSE MAG L A GY EAD+ L NTCT++ ++ + + +
Sbjct: 30 SFWIQTFGCQMNKADSERMAGILEAMGYHEAPAELEADLVLYNTCTIRDNAEQKVYSYLG 89
Query: 120 KCKSAKK-----PLVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEV 171
+ K+ LVVAGCV Q G L+ + + +V G Q +R+ ++ + G +V
Sbjct: 90 RQARRKRTHPHLKLVVAGCVAQQEGEALLRRIPELDLVMGPQHANRLEALLTQVDNGQQV 149
Query: 172 RLLHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGR 229
+ DL RR+ + +NV GC CTYC RG S + E++
Sbjct: 150 VATDDNHILE-DLTTARRDSTI-CAWVNVIYGCNERCTYCVVPSVRGKEQSRSPEAIRLE 207
Query: 230 VRTVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAIVAELPPDGSTMLRIGMT 283
+ + A G +E+ L ++ AYGRD+ G L + + +G +R +
Sbjct: 208 IEGLAARGFREITLLGQNIDAYGRDLPGITPEGRRQNTLTDLLHHIHDVEGIERIRFATS 267
Query: 284 NPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELV 343
+P + E L E L P V H+P QSG + VL AM R YT+ +R +V+ + EL+
Sbjct: 268 HPRYFTERLIEACFDL--PKVCEHFHIPFQSGDNDVLKAMARGYTVERYRRIVNRIRELM 325
Query: 344 PGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARM-KKVPSAV 402
P I+TD+I FPGETD F T+NL++E F QV+ + + PRP TPAA ++P AV
Sbjct: 326 PDAAISTDVIVAFPGETDAQFQNTLNLLEEVGFDQVNTAAYSPRPNTPAATWSNQLPEAV 385
Query: 403 VKKRSRELTSVFE--AFTPYLGMEGRVERIWITEIAADGIHLVRLEQF 448
+R ++L ++ E A G+VE ++ A+GI+ + +Q
Sbjct: 386 KVERLKQLNALVERIALQRNSRYSGKVE-----QVLAEGINPKKPQQL 428
>sp|B7GJM6|MIAB_ANOFW (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1)
GN=miaB PE=3 SV=1
Length = 527
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 119/366 (32%), Positives = 192/366 (52%), Gaps = 16/366 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG A GY TD E+A++ L+NTC ++ +++ + I
Sbjct: 86 FYIRTYGCQMNEHDTEVMAGIFMALGYEPTDRPEDANVILLNTCAIRENAENKVFGEIGH 145
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
K K+ L V GC+ Q ++ LK+ + V ++ G I R+ +++E E
Sbjct: 146 LKPLKQNNPDLLLGVCGCMSQEESVVNKILKQFQYVDMIFGTHNIHRLPYILKEAYMSKE 205
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
V + ++ +LPKVR+ + I GC CTYC + RG S E ++
Sbjct: 206 MVVEVWSKEGDVIENLPKVRKGNIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQ 265
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
VR + A G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 266 EVRHLAAQGYKEITLLGQNVNAYGKDF-TDMKYGLGDLMDELRKIDIPRIRFTTSHPRDF 324
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+ L E+ + + + +H+PVQSGS VL M R+YT + +V + E +PG+ +
Sbjct: 325 DDRLIEV--LAKGGNLVEHIHLPVQSGSSEVLKMMARKYTREQYLELVRKIKEAIPGVAL 382
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARM-KKVPSAVVKKRS 407
TDII GFP ETDE F +T++L +E +F + PR GTPAA+M VP V K+R
Sbjct: 383 TTDIIVGFPNETDEQFEETLSLYREVEFDSAFTFIYSPREGTPAAKMVDNVPMEVKKERL 442
Query: 408 RELTSV 413
+ L ++
Sbjct: 443 QRLNAL 448
>sp|B7IFC4|MIAB_THEAB (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Thermosipho africanus (strain TCF52B) GN=miaB PE=3
SV=1
Length = 429
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 196/359 (54%), Gaps = 25/359 (6%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
++KT+GC N++DSE L GY +N EADI ++NTC V+ ++ + I +
Sbjct: 3 FFIKTYGCQMNENDSEVARYYLEQEGYESAENENEADIVILNTCVVRKKAEDKFLSTIGE 62
Query: 121 CKSAKKPLVVAGCVPQGSRDLKE---LEGVS-IVGVQQIDRVVEVVEETLKGHEVRLLHR 176
+ K + V GC G+ LKE GV+ ++G + I R+ E VE ++KG + +
Sbjct: 63 LRKKNKKIGVMGC---GAEKLKEDLFKRGVNFVIGTRAISRIPEAVELSIKGKKAAIFD- 118
Query: 177 KKLPALDLPKV--RRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTVI 234
KL +D + R +K + I GC CTYC + RG S ++ ++ V+ +
Sbjct: 119 DKLDEIDYRNILKRNSKHHAWITIIYGCNRFCTYCIVPYTRGREKSRKMDDILREVKNLS 178
Query: 235 ADGVKEVWLSSEDTGAYGRDI--GVNLPILLNAIVAELPPDGSTMLRIG-MTNPP--FIL 289
+GV+E+ ++ AYG+D+ G +L LLN + RI +T+ P F L
Sbjct: 179 LNGVREITYLGQNVDAYGKDLNDGTSLAKLLNE-----TKKIENIERIWFLTSYPTDFSL 233
Query: 290 EHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIA 349
+ +EIA + + +H+PVQ GS+ +L MNR YT+ ++ ++ ++ E+VP I+
Sbjct: 234 DIAREIASSEK---IAKSIHLPVQHGSNKILKKMNRRYTIEEYYELIKSIREIVPDASIS 290
Query: 350 TDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARM--KKVPSAVVKKR 406
+DII GFP ET++DF QTV L++E KF +++++ + PR GT A + VP A+ +R
Sbjct: 291 SDIIVGFPDETEDDFQQTVKLVEEIKFERLNLAIYSPREGTIAWKYFEDNVPRAIKTRR 349
>sp|Q5L0E8|MIAB_GEOKA (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Geobacillus kaustophilus (strain HTA426) GN=miaB PE=3
SV=1
Length = 531
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 190/368 (51%), Gaps = 16/368 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG A GY TD EEA++ L+NTC ++ +++ + +
Sbjct: 82 FYIRTYGCQMNEHDTEVMAGIFMALGYEPTDRPEEANVILLNTCAIRENAENKVFGELGY 141
Query: 121 CKSAKKP-----LVVAGCVPQGS----RDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
K K L V GC+ Q + LK+ + V ++ G I R+ ++ E E
Sbjct: 142 LKPLKTTNPDLLLGVCGCMSQEESVVKKILKQYQYVDLIFGTHNIHRLPYILHEAYMSKE 201
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
V + ++ +LPKVR+ K + I GC CTYC + RG S E ++
Sbjct: 202 MVVEVWSKEGDVVENLPKVRKGKIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQ 261
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
VR + A G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 262 EVRQLAAQGYKEITLLGQNVNAYGKDF-TDIQYGLGDLMDELRKIDIARIRFTTSHPRDF 320
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+ L E+ + + + +H+PVQSGS +L M R+YT ++ +V + +P + +
Sbjct: 321 DDRLIEV--LAKRGNLVEHIHLPVQSGSTEILKMMGRKYTREEYLELVRKIKAAIPDVAL 378
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVKKRS 407
TDII GFP ETDE F +T++L +E +F + + PR GTPAA MK VP V K+R
Sbjct: 379 TTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIYSPREGTPAANMKDNVPMEVKKERL 438
Query: 408 RELTSVFE 415
+ L + +
Sbjct: 439 KRLNDLVQ 446
>sp|A2CB74|MIAB_PROM3 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Prochlorococcus marinus (strain MIT 9303) GN=miaB
PE=3 SV=1
Length = 480
Score = 188 bits (478), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 208/408 (50%), Gaps = 28/408 (6%)
Query: 60 TIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA 119
+ +++TFGC N++DSE MAG L A GY EAD+ L NTCT++ ++ + + +
Sbjct: 30 SFWIQTFGCQMNKADSERMAGILEAMGYHEAPAELEADLVLYNTCTIRDNAEQKVYSYLG 89
Query: 120 KCKSAKK-----PLVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEV 171
+ K+ LVVAGCV Q G L+ + + +V G Q +R+ ++ + G +V
Sbjct: 90 RQARRKRTHPHLKLVVAGCVAQQEGEALLRRIPELDLVMGPQHANRLEALLTQVDNGQQV 149
Query: 172 RLLHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGR 229
+ DL RR+ + +NV GC CTYC RG S + E++
Sbjct: 150 VATDDNHILE-DLTTARRDSTI-CAWVNVIYGCNERCTYCVVPSVRGKEQSRSPEAIRLE 207
Query: 230 VRTVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAIVAELPPDGSTMLRIGMT 283
+ + A G +E+ L ++ AYGRD+ G L + + +G +R +
Sbjct: 208 IEGLAARGFREITLLGQNIDAYGRDLPGITPEGRRQNTLTDLLHHIHDVEGIERIRFATS 267
Query: 284 NPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELV 343
+P + E L E L P V H+P QSG + VL AM R YT+ +R +V+ + EL+
Sbjct: 268 HPRYFTERLIEACFDL--PKVCEHFHIPFQSGDNDVLKAMARGYTVERYRRIVNRIRELM 325
Query: 344 PGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARM-KKVPSAV 402
P I+TD+I FPGETD F T+NL++E F QV+ + + PRP TPAA ++P V
Sbjct: 326 PDAAISTDVIVAFPGETDAQFQNTLNLVEEVGFDQVNTAAYSPRPNTPAATWSNQLPEVV 385
Query: 403 VKKRSRELTSVFE--AFTPYLGMEGRVERIWITEIAADGIHLVRLEQF 448
+R ++L ++ E A G+VE ++ A+GI+ + +Q
Sbjct: 386 KVERLKQLNALVERVALQRNSRYSGKVE-----QVLAEGINPKKPQQL 428
>sp|B1L8F3|MIAB_THESQ (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Thermotoga sp. (strain RQ2) GN=miaB PE=3 SV=1
Length = 443
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 212/397 (53%), Gaps = 19/397 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA- 119
Y+KTFGC N++DSE MAG L G+ EEAD+ +INTC V+ S+ + +
Sbjct: 3 FYIKTFGCQMNENDSETMAGLLMKEGFTPASAPEEADVVIINTCAVRRKSEEKAYSELGQ 62
Query: 120 --KCKSAKKPLV-VAGCVPQGSRD-LKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL- 174
K K +K +V VAGCV + R+ L E ++G + + +V E V+ L+G +V L
Sbjct: 63 MLKIKRKRKLVVGVAGCVAEKEREKLLERGADFVLGTRAVLKVTEAVKRALQGEKVALFE 122
Query: 175 -HRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTV 233
H + +LP++R +K + I GC CTYC + RG S +E ++ VR +
Sbjct: 123 DHLDEYTH-ELPRIRSSKHHAWVTIIFGCDRFCTYCIVPYTRGREKSRPMEDILEEVREL 181
Query: 234 IADGVKEVWLSSEDTGAYGRDI--GVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEH 291
G +EV ++ AYG+D+ G +L LL +G + + P +
Sbjct: 182 AKQGYREVTFLGQNVDAYGKDLKDGSSLAKLLEEAS---KIEGIERIWFLTSYPTDFSDE 238
Query: 292 LKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATD 351
L E+ + R+P V +H+PVQSGS+ +L MNR YT ++ +++ + VP + I++D
Sbjct: 239 LIEV--IARNPKVAKSVHLPVQSGSNRILKLMNRSYTKEEYLALLERIRSKVPDVAISSD 296
Query: 352 IICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKK--VPSAVVKKRSRE 409
II GFP ET+EDF +T++L+++ +F +++++ + PR GT A + K VP +R +
Sbjct: 297 IIVGFPTETEEDFMETIDLVEKAQFERLNLAIYSPRKGTVAWKHYKDEVPYEEKVRRMQF 356
Query: 410 LTSVFEAFTPYLG--MEGRVERIWITEIAADGIHLVR 444
L ++ + L +G+ R+ + A +G+ R
Sbjct: 357 LMNLQKRINRKLNERYKGKTVRVIVEAQAKNGLFYGR 393
>sp|A5IJD4|MIAB_THEP1 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 /
DSM 13995) GN=miaB PE=3 SV=1
Length = 443
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 212/397 (53%), Gaps = 19/397 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA- 119
Y+KTFGC N++DSE MAG L G+ EEAD+ +INTC V+ S+ + +
Sbjct: 3 FYIKTFGCQMNENDSETMAGLLMKEGFTPASAPEEADVVIINTCAVRRKSEEKAYSELGQ 62
Query: 120 --KCKSAKKPLV-VAGCVPQGSRD-LKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL- 174
K K +K +V VAGCV + R+ L E ++G + + +V E V+ L+G +V L
Sbjct: 63 MLKIKRKRKLVVGVAGCVAEKEREKLLERGADFVLGTRAVLKVTEAVKRALQGEKVALFE 122
Query: 175 -HRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTV 233
H + +LP++R +K + I GC CTYC + RG S +E ++ VR +
Sbjct: 123 DHLDEYTH-ELPRIRSSKHHAWVTIIFGCDRFCTYCIVPYTRGREKSRPMEDILEEVREL 181
Query: 234 IADGVKEVWLSSEDTGAYGRDI--GVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEH 291
G +EV ++ AYG+D+ G +L LL +G + + P +
Sbjct: 182 AKQGYREVTFLGQNVDAYGKDLKDGSSLAKLLEEAS---KIEGIERIWFLTSYPTDFSDE 238
Query: 292 LKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATD 351
L E+ + R+P V +H+PVQSGS+ +L MNR YT ++ +++ + VP + I++D
Sbjct: 239 LIEV--IARNPKVAKSVHLPVQSGSNRILKLMNRSYTKEEYLALLERIRSKVPDVAISSD 296
Query: 352 IICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKK--VPSAVVKKRSRE 409
II GFP ET+EDF +T++L+++ +F +++++ + PR GT A + K VP +R +
Sbjct: 297 IIVGFPTETEEDFMETIDLVEKAQFERLNLAIYSPRKGTVAWKHYKDEVPYEEKVRRMQF 356
Query: 410 LTSVFEAFTPYLG--MEGRVERIWITEIAADGIHLVR 444
L ++ + L +G+ R+ + A +G+ R
Sbjct: 357 LMNLQKRINRKLNERYKGKTVRVIVEAQAKNGLFYGR 393
>sp|Q2JQX6|MIAB_SYNJA (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Synechococcus sp. (strain JA-3-3Ab) GN=miaB PE=3 SV=1
Length = 453
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 185/346 (53%), Gaps = 19/346 (5%)
Query: 60 TIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA 119
T Y TFGC N++DSE MAG L + GY ++ +AD+ L NTCT++ ++ + + +
Sbjct: 5 TYYTITFGCQMNRADSERMAGILESLGYVPAEDELQADLVLFNTCTIRDNAEQKVYSYLG 64
Query: 120 -----KCKSAKKPLVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEV 171
K K+ L+VAGCV Q G R L+ + + +V G Q ++R+ +++ + G++V
Sbjct: 65 IQAQRKRKNPAIKLIVAGCVAQQEGERLLRRVPELDLVMGPQYVNRLGDLLAQVEAGNQV 124
Query: 172 RLLHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGR 229
++P D+ K RR+ V INV GC CTYC RG S +++
Sbjct: 125 VATEPVEIPE-DITKPRRDSRVTAW-INVIYGCNERCTYCIVPLVRGREQSRQPQAIRAE 182
Query: 230 VRTVIADGVKEVWLSSEDTGAYGRDIG--VNLPILLNAIVAELPPDGSTMLRIGMTNPPF 287
+ V G +EV L ++ AYGRD+ NL LL + + +G +R ++P +
Sbjct: 183 IEDVARAGYREVTLLGQNIDAYGRDLDPKTNLASLLRFVHS---VEGIERIRFATSHPRY 239
Query: 288 ILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQ 347
E L IA P V H+P Q+GSDAVL M R YT +R ++ + + +P
Sbjct: 240 FTEEL--IATCAELPKVCEHFHIPFQAGSDAVLKRMRRGYTQERYRQLIQLIRQYMPEAT 297
Query: 348 IATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAA 393
I+ D I GFPGET+ F +T+ L+++ F ++ + + PRPGTPAA
Sbjct: 298 ISADAIVGFPGETEAQFQETLQLVQDIGFDFLNTAAYSPRPGTPAA 343
>sp|P73127|MIAB_SYNY3 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=miaB
PE=3 SV=1
Length = 451
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 201/393 (51%), Gaps = 29/393 (7%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
++ TFGC N++DSE MAG L G TD+ +AD+ L NTC+++ ++ + + + +
Sbjct: 9 HIITFGCQMNKADSERMAGILENLGMTYTDDPNQADLVLYNTCSIRDNAEQKVYSYLGRQ 68
Query: 122 KSAKK-----PLVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEVRL 173
K+ LVVAGCV Q G + L+ + + +V G Q +R+ +++E+ G +V
Sbjct: 69 AKRKQVEPELTLVVAGCVAQQEGEQLLRRVPELDLVMGPQHANRLDQLLEQVWAGSQV-- 126
Query: 174 LHRKKLPAL-DLPKVRRNKFVEI-LPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
+ + L + D+ K RR V + I GC C+YC + RG S T E++ G +
Sbjct: 127 VATESLHIMEDITKPRRESTVSAWVNIIYGCNERCSYCVVPNVRGVEQSRTPEAIYGEME 186
Query: 232 TVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAIVAELPPDGSTMLRIGMTNP 285
+ G KEV L ++ AYGRD+ G +L L + + +G LR ++P
Sbjct: 187 VLAQQGFKEVTLLGQNIDAYGRDLPGTTPSGRHLHTLTDLLYHVHDIEGIDRLRFATSHP 246
Query: 286 PFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPG 345
+ E L + + L P V H+P QSG + +L AM R YT + +++ + +P
Sbjct: 247 RYFTERLIQACQEL--PKVCEHFHIPFQSGDNDILKAMKRGYTREKYLQIIEKIRRYMPD 304
Query: 346 MQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVPSAVVK- 404
I+ D+I GFPGET+ F T+NLI+E F ++ + + PRPGTPAA S VK
Sbjct: 305 AAISADVIVGFPGETEAQFENTLNLIEEVGFDLLNTAAYSPRPGTPAAFWDNQLSEEVKG 364
Query: 405 ---KRSREL--TSVFEAFTPYLGMEGRVERIWI 432
+R L T E YL GRVE + +
Sbjct: 365 DRLQRLNHLVSTQAMERSQRYL---GRVEEVLV 394
>sp|Q2JKY0|MIAB_SYNJB (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=miaB
PE=3 SV=1
Length = 444
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 185/346 (53%), Gaps = 19/346 (5%)
Query: 60 TIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA 119
T Y TFGC N++D+E MAG L + GY T++ +AD+ L NTCT++ ++ + + +
Sbjct: 5 TYYTITFGCQMNRADTERMAGILESLGYVATEDELQADLVLYNTCTIRDNAEQKVYSYLG 64
Query: 120 -----KCKSAKKPLVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEV 171
K K+ L+VAGCV Q G + L+ + + +V G Q ++R+ +++ + G++V
Sbjct: 65 IQAQRKRKNPAIKLIVAGCVAQQEGEKLLRRVPELDLVMGPQYVNRLGDLLAQVEAGNQV 124
Query: 172 RLLHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGR 229
++P D+ K RR+ V INV GC CTYC RG S +++
Sbjct: 125 VATDPVEIPE-DITKPRRDSQVTAW-INVIYGCNERCTYCIVPRVRGQEQSRQPQAIRAE 182
Query: 230 VRTVIADGVKEVWLSSEDTGAYGRDIG--VNLPILLNAIVAELPPDGSTMLRIGMTNPPF 287
+ V G +EV L ++ AYGRD+ NL LL + + +G +R ++P +
Sbjct: 183 IEDVARAGYREVTLLGQNIDAYGRDLDPKTNLASLLRFVHS---VEGIERIRFATSHPRY 239
Query: 288 ILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQ 347
E L I P V H+P Q+GS+ VL M R YT +R ++ + + +P
Sbjct: 240 FTEEL--ITTCAELPKVCEHFHIPFQAGSNEVLKRMRRGYTHERYRQIIQLIRQYMPEAA 297
Query: 348 IATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAA 393
I+ D I GFPGET+ F +T+ L+++ F QV+ + + PRPGTPAA
Sbjct: 298 ISADAIVGFPGETEAQFQETLQLVQDIGFDQVNTAAYSPRPGTPAA 343
>sp|A6LJ47|MIAB_THEM4 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Thermosipho melanesiensis (strain BI429 / DSM 12029)
GN=miaB PE=3 SV=1
Length = 430
Score = 185 bits (470), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 191/356 (53%), Gaps = 19/356 (5%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
I++KT+GC N++DSE L GY +T+N +ADI ++NTC V+ S+ + I +
Sbjct: 4 IHIKTYGCQMNENDSEVAKFYLEEEGYEITNNENDADIVILNTCVVRKKSEDKFYSHIGE 63
Query: 121 CKSAKKPLVVAGCVPQGSRDLKELEGVS-IVGVQQIDRVVEVVEETLKGHEVRLLHRKKL 179
K K + + GC + ++ GV ++G + I + + VE + G + + K+
Sbjct: 64 LKKQNKIIGIMGCGAEKEKEKLFKRGVKFVIGTRAIPLIPQAVERAINGKKSAIFE-DKM 122
Query: 180 PALDLPKV--RRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTVIADG 237
+D K+ R +K + I GC CTYC + RG S ++ ++ V + G
Sbjct: 123 DEIDYKKILKRNSKHHAWITIIYGCNRFCTYCIVPYTRGREKSRKMDDIINEVENLAKSG 182
Query: 238 VKEVWLSSEDTGAYGRDI--GVNLPILLNAIVAELPPDGSTMLRIG-MTNPP--FILEHL 292
+KEV ++ AYG+D+ G +L LLN L D + RI +T+ P F L+
Sbjct: 183 IKEVTYLGQNVDAYGKDLNDGSSLAKLLN-----LTKDIEEIERIWFLTSYPTDFSLDIA 237
Query: 293 KEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDI 352
E+A + + +H+PVQ GS+ +L MNR YT+ ++ +++ + ++VP I++DI
Sbjct: 238 HEVANSSK---ITKNIHLPVQHGSNKILKKMNRRYTIEEYIELINDIRKIVPDASISSDI 294
Query: 353 ICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARM--KKVPSAVVKKR 406
I GFP ET+EDF +TV L+K KF +++++ + PR GT A + VP + KR
Sbjct: 295 IVGFPDETEEDFEKTVELVKNIKFERLNLAIYSPREGTIAWKYFEDNVPRIIKTKR 350
>sp|Q4L5Z6|MIAB_STAHJ (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Staphylococcus haemolyticus (strain JCSC1435) GN=miaB
PE=3 SV=1
Length = 514
Score = 185 bits (470), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 191/365 (52%), Gaps = 16/365 (4%)
Query: 60 TIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA 119
T +KT+GC N D+E MAG L A GY T++ EAD+ LINTC ++ +++ + + I
Sbjct: 69 TFLIKTYGCQMNAHDTEVMAGILQALGYTATEDINEADVILINTCAIRENAENKVFSEIG 128
Query: 120 KCKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETL--K 167
K KK + V GC+ Q ++ LK + V ++ G I ++ E++EE K
Sbjct: 129 NLKHLKKNRPEALIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHKLPEILEEAYLSK 188
Query: 168 GHEVRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLV 227
V + ++ +LPKVR + I GC CTYC RG S E ++
Sbjct: 189 AMVVEVWSKEGDIIENLPKVREGSTKAWVNIMYGCDKFCTYCIVPFTRGKERSRRPEDII 248
Query: 228 GRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPF 287
VR + DG KE+ L ++ +YG+DI +L L ++ ++ +R ++P
Sbjct: 249 EEVRGLARDGYKEITLLGQNVNSYGKDIK-DLEYGLGDLLEDISKIDIPRVRFTTSHPWD 307
Query: 288 ILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQ 347
+ + E+ + + + +H+PVQSG++AVL M R+YT + +V+ + + +P +
Sbjct: 308 FTDRMIEV--IAKGGNIVPHIHLPVQSGNNAVLKIMGRKYTRESYLDLVNRIKKSIPNVA 365
Query: 348 IATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVKKR 406
+ TDII G+P ET+E F +T++L E +F + + R GTPAA+MK VP V K R
Sbjct: 366 LTTDIIVGYPNETEEQFEETLSLYDEVQFEHAYTYLYSQRDGTPAAKMKDNVPEDVKKAR 425
Query: 407 SRELT 411
+ L
Sbjct: 426 LQRLN 430
>sp|A4IMH7|MIAB_GEOTN (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Geobacillus thermodenitrificans (strain NG80-2)
GN=miaB PE=3 SV=2
Length = 523
Score = 185 bits (469), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 191/368 (51%), Gaps = 16/368 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG A GY TD E+A++ L+NTC ++ +++ + +
Sbjct: 82 FYIRTYGCQMNEHDTEVMAGIFMALGYEPTDRPEDANVILLNTCAIRENAENKVFGELGY 141
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
K K L V GC+ Q ++ LK+ + V ++ G I R+ ++ E E
Sbjct: 142 LKPLKTTNPDLLLGVCGCMSQEEAVVNKILKQYQYVDLIFGTHNIHRLPYILHEAYMSKE 201
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
V + ++ +LPKVR+ + I GC CTYC + RG S E ++
Sbjct: 202 MVVEVWSKEGDVVENLPKVRKGNIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQ 261
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
VR + A G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 262 EVRQLAAQGYKEITLLGQNVNAYGKDFN-DIQYGLGDLMDELRKIDIARIRFTTSHPRDF 320
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+ L E+ + + + +H+PVQSGS +L M R+YT ++ +V + +P + +
Sbjct: 321 DDRLIEV--LAKRGNLVEHIHLPVQSGSTEILKMMGRKYTREEYLELVRKIKAAIPDVAL 378
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVKKRS 407
TDII GFP ETDE F +T++L +E +F + + PR GTPAA+M VP V K+R
Sbjct: 379 TTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIYSPREGTPAAKMNDNVPMEVKKERL 438
Query: 408 RELTSVFE 415
+ L ++ +
Sbjct: 439 QRLNALVQ 446
>sp|A7Z4X2|MIAB_BACA2 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacillus amyloliquefaciens (strain FZB42) GN=miaB
PE=3 SV=1
Length = 509
Score = 185 bits (469), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 195/371 (52%), Gaps = 16/371 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG A GY T++ ++A++ L+NTC ++ +++ + +
Sbjct: 68 FYIRTYGCQMNEHDTEVMAGIFMALGYEATNSVDDANVILLNTCAIRENAENKVFGELGH 127
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
K+ KK L V GC+ Q +R LK+ V ++ G I R+ E++ E E
Sbjct: 128 LKALKKNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHNIHRLPELLSEAYLSKE 187
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
+ + ++ +LPKVR K + I GC CTYC + RG S E ++
Sbjct: 188 MVIEVWSKEGDVIENLPKVRNGKIKGWVNIMYGCDKFCTYCIVPYTRGKERSRRPEEIIQ 247
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
VR + ++G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 248 EVRRLASEGYKEITLLGQNVNAYGKDFE-DMTYGLGDLMDELRKIDIPRIRFTTSHPRDF 306
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+HL E+ + + + +H+PVQSGS A+L M R+Y + +V + +P +
Sbjct: 307 DDHLIEV--LAKGGNLLDHIHLPVQSGSSAMLKMMARKYDRERYLELVGKIKAAMPNASL 364
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVKKRS 407
TDII GFP ETDE F +T++L +E +F + + PR GTPAA+MK VP V K+R
Sbjct: 365 TTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIYSPREGTPAAKMKDNVPMRVKKERL 424
Query: 408 RELTSVFEAFT 418
+ L + + +
Sbjct: 425 QRLNDLVKEIS 435
>sp|A8FDH0|MIAB_BACP2 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacillus pumilus (strain SAFR-032) GN=miaB PE=3 SV=1
Length = 508
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 196/366 (53%), Gaps = 16/366 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG A GY T+++E+A++ L+NTC ++ +++ + +
Sbjct: 67 FYIRTYGCQMNEHDTEVMAGIFMALGYEPTNSTEDANVILLNTCAIRENAENKVFGELGH 126
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
K+ K+ L V GC+ Q +R LK+ V ++ G I R+ E++ E E
Sbjct: 127 LKALKREKPDLILGVCGCMSQEESVVNRILKKHPFVDLIFGTHNIHRLPELLSECYLSKE 186
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
+ + ++ +LP+ R+ K + I GC CTYC + RG S + ++
Sbjct: 187 MVIEVWSKEGDVIENLPRARQGKIKGWVNIMYGCDKFCTYCIVPYTRGKERSRRPDEIIQ 246
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
VR + A+G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 247 EVRRLAAEGYKEITLLGQNVNAYGKDFE-DMEYGLGHLMDELRKIDIPRIRFTTSHPRDF 305
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+HL E+ + + + +H+PVQSGS +VL M R+Y + +V + E +P +
Sbjct: 306 DDHLIEV--LAKGGNLLDHIHLPVQSGSSSVLKLMARKYDRERYLDLVRKIKEAMPNASL 363
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVKKRS 407
TDII GFP ETDE F +T++L +E +F + + PR GTPAA+M+ VP V K+R
Sbjct: 364 TTDIIVGFPNETDEQFEETLSLYREVEFDAAYTFIYSPREGTPAAKMQDNVPMHVKKERL 423
Query: 408 RELTSV 413
+ L ++
Sbjct: 424 QRLNAL 429
>sp|A7GRA2|MIAB_BACCN (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98)
GN=miaB PE=3 SV=1
Length = 509
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 196/371 (52%), Gaps = 16/371 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG + GY T +E+AD+ L+NTC ++ +++ + +
Sbjct: 68 FYIRTYGCQMNEHDTEVMAGIFTTLGYEPTFTTEDADVILLNTCAIRENAENKVFGELGH 127
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETL--KG 168
K K+ + V GC+ Q ++ +++ + V +V G I R+ ++++ + K
Sbjct: 128 LKPLKQKNPDLLIGVCGCMSQEESVVNKIMQKHQHVDMVFGTHNIHRLPYILKDAMFSKA 187
Query: 169 HEVRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
V + ++ +LPKVRR + I GC CTYC + RG S E ++
Sbjct: 188 TVVEVWSKEGDVIENLPKVRRGDIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIK 247
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
VR + A+G KE+ L ++ AYG+D +L L ++ EL +R ++P
Sbjct: 248 EVRHLAANGYKEITLLGQNVNAYGKDFD-DLEYGLGDLMDELRKIDIARIRFTTSHPRDF 306
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+HL E+ + + + +H+PVQSGS +L M R+YT + +V + + +P + +
Sbjct: 307 DDHLIEV--LGKGGNLVEHIHLPVQSGSTDMLKIMARKYTREQYLELVRKIKKTIPNVVL 364
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVKKRS 407
TDII GFP ETDE F +T++L +E +F + PR GTPAA+MK +P V K+R
Sbjct: 365 TTDIIVGFPNETDEQFEETLSLYREVEFDSAFTFIYSPREGTPAAKMKDNIPMEVKKERL 424
Query: 408 RELTSVFEAFT 418
+ L + F+
Sbjct: 425 QRLNELVNEFS 435
>sp|O31778|MIAB_BACSU (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacillus subtilis (strain 168) GN=miaB PE=1 SV=1
Length = 509
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 193/366 (52%), Gaps = 16/366 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG A GY T++ ++A++ L+NTC ++ +++ + +
Sbjct: 68 FYIRTYGCQMNEHDTEVMAGIFMALGYEATNSVDDANVILLNTCAIRENAENKVFGELGH 127
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
K+ KK L V GC+ Q +R LK+ V ++ G I R+ E++ E E
Sbjct: 128 LKALKKNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHNIHRLPELLSEAYLSKE 187
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
V + ++ +LPKVR K + I GC CTYC + RG S E ++
Sbjct: 188 MVVEVWSKEGDVIENLPKVRNGKIKGWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQ 247
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
VR + ++G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 248 EVRRLASEGYKEITLLGQNVNAYGKDFE-DMTYGLGDLMDELRKIDIPRIRFTTSHPRDF 306
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+ L E+ + + + +H+PVQSGS VL M R+Y + +V + E +P +
Sbjct: 307 DDRLIEV--LAKGGNLLDHIHLPVQSGSSEVLKLMARKYDRERYMELVRKIKEAMPNASL 364
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVKKRS 407
TDII GFP ETDE F +T++L +E +F + + PR GTPAA+MK VP V K+R
Sbjct: 365 TTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIYSPREGTPAAKMKDNVPMRVKKERL 424
Query: 408 RELTSV 413
+ L ++
Sbjct: 425 QRLNAL 430
>sp|Q8DJB2|MIAB_THEEB (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Thermosynechococcus elongatus (strain BP-1) GN=miaB
PE=3 SV=1
Length = 450
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 194/386 (50%), Gaps = 28/386 (7%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
Y+ TFGC N++DSE MAG L A G L +EAD+ L NTCT++ ++ + + + +
Sbjct: 6 YITTFGCQMNKADSERMAGILEAMGLELAAEPDEADVLLYNTCTIRDNAEQKLYSYLGRQ 65
Query: 122 KSAKKP-----LVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEVRL 173
K L+VAGCV Q G + L+ + V +V G Q +R+ E++E+ G +V
Sbjct: 66 AKRKHQDPNLTLIVAGCVAQQEGEQLLRRVPEVDLVMGPQYANRLGELLEQVWNGSQVVA 125
Query: 174 LHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
++ D+ K RR+ V +NV GC CTYC RG S E++ +
Sbjct: 126 TEPLQI-VEDITKPRRDSTVTAW-VNVIYGCNERCTYCVVPGVRGQEQSRRPEAIRAEIE 183
Query: 232 TVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAIVAELPPDGSTMLRIGMTNP 285
+ A G KEV L ++ AYGRD+ G + + G +R ++P
Sbjct: 184 ELAAQGYKEVTLLGQNIDAYGRDLPGITPEGRRQHTFTDLLYYIHDVAGIERIRFATSHP 243
Query: 286 PFILEHL-KEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVP 344
+ E L + AE+ P V H+P QSG + +L AM R YT + +++T+ +P
Sbjct: 244 RYFTERLIRACAEL---PKVCKHFHIPFQSGDNEILKAMARGYTRERYLHIIETIRRYMP 300
Query: 345 GMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVV 403
I+ D I GFPGET+E F +T++L+ F Q++ + + PRP TPAA + +VP A+
Sbjct: 301 DAAISADAIVGFPGETEEQFQRTLDLVAAVGFDQLNTAAYSPRPNTPAATWENQVPEAIK 360
Query: 404 KKRSRELTSVFEAFT-----PYLGME 424
+ R + L + YLG E
Sbjct: 361 EDRLQRLNHLVAKIAGDRSQRYLGRE 386
>sp|Q732V4|MIAB_BACC1 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacillus cereus (strain ATCC 10987) GN=miaB PE=3 SV=1
Length = 509
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 196/366 (53%), Gaps = 16/366 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG +A GY T ++EEAD+ L+NTC ++ +++ + +
Sbjct: 68 FYIRTYGCQMNEHDTEVMAGIFTALGYEPTFSTEEADVVLLNTCAIRENAENKVFGELGH 127
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
K+ K+ + V GC+ Q ++ +++ + V +V G I R+ ++++ + E
Sbjct: 128 LKALKRRNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNIHRLPYILKDAMFSKE 187
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
V + ++ +LPKVRR + I GC CTYC + RG S E ++
Sbjct: 188 TVVEVWSKEGDVIENLPKVRRGDIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQ 247
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
+R + A+G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 248 EIRHLAANGYKEITLLGQNVNAYGKDFE-DIEYGLGDLMDELRKVDIARIRFTTSHPRDF 306
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+HL E+ + + + +H+PVQSGS +L M R+Y+ + +V + E +P +
Sbjct: 307 DDHLIEV--LGKGGNLVEHIHLPVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVL 364
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVKKRS 407
TDII GFP ETDE F +T++L +E F + PR GTPAA+MK VP V K+R
Sbjct: 365 TTDIIVGFPNETDEQFEETMSLYREVGFDTAFTFIYSPREGTPAAKMKDNVPMEVKKERL 424
Query: 408 RELTSV 413
+ L ++
Sbjct: 425 QRLNAL 430
>sp|B7K993|MIAB_CYAP7 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Cyanothece sp. (strain PCC 7424) GN=miaB PE=3 SV=1
Length = 454
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/402 (32%), Positives = 209/402 (51%), Gaps = 41/402 (10%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
++ TFGC N++DSE MAG L GY +D+ EAD+ L NTCT++ ++ + + + +
Sbjct: 9 HITTFGCQMNKADSERMAGILEDIGYQWSDDPNEADLVLYNTCTIRDNAEQKVYSYLGRQ 68
Query: 122 KSAK--KP---LVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEVRL 173
K KP L+VAGCV Q G + L+ + + +V G Q +R+ ++++E L G++V
Sbjct: 69 AKRKHEKPDLTLIVAGCVAQQEGEKLLRRVPELDLVMGPQHANRLQDLLQEVLAGNQVVA 128
Query: 174 LHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
+ D+ K RR V +NV GC CTYC + RG S T +++ +
Sbjct: 129 TEPIHI-VEDITKPRRESTVTAW-VNVIYGCNERCTYCVVPNVRGVEQSRTPQAIRAEMV 186
Query: 232 TVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAI--VAELPPDGSTMLRIGMT 283
+ G KE+ L ++ AYGRD+ G + L + + V ++P G +R +
Sbjct: 187 ELGQQGYKEITLLGQNIDAYGRDLPGVTESGRHQHTLTDLLYYVNDVP--GIERIRFATS 244
Query: 284 NPPFILEHL----KEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTL 339
+P + E L KE+ +V H H+P QSG + +L AM R YT +R ++D +
Sbjct: 245 HPRYFTERLIVACKELPKVCEH------FHIPFQSGDNDLLKAMKRGYTHERYRQIIDKI 298
Query: 340 IELVPGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVP 399
E +P I+ D I GFPGET+ F T+ L+++ F Q++ + + PRPGTPAA
Sbjct: 299 REYMPDASISADAIVGFPGETEAQFENTLKLVEDIGFDQLNTAAYSPRPGTPAALWDNQL 358
Query: 400 SAVVK----KRSRELTSV--FEAFTPYLGMEGRVERIWITEI 435
S VK +R L ++ E YL GR+E + + ++
Sbjct: 359 SEEVKSDRLQRLNHLVAIKAAERSQRYL---GRIEEVLVEDV 397
>sp|B7HLA6|MIAB_BACC7 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacillus cereus (strain AH187) GN=miaB PE=3 SV=1
Length = 509
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 196/366 (53%), Gaps = 16/366 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG +A GY T ++EEAD+ L+NTC ++ +++ + +
Sbjct: 68 FYIRTYGCQMNEHDTEVMAGIFTALGYEPTFSTEEADVVLLNTCAIRENAENKVFGELGH 127
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
K+ K+ + V GC+ Q ++ +++ + V +V G I R+ ++++ + E
Sbjct: 128 LKALKRRNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNIHRLPYILKDAMFSKE 187
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
V + ++ +LPKVRR + I GC CTYC + RG S E ++
Sbjct: 188 TVVEVWSKEGDVIENLPKVRRGDIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQ 247
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
+R + A+G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 248 EIRHLAANGYKEITLLGQNVNAYGKDFE-DIEYGLGDLMDELRKVDIARIRFTTSHPRDF 306
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+HL E+ + + + +H+PVQSGS +L M R+Y+ + +V + E +P +
Sbjct: 307 DDHLIEV--LGKGGNLVEHIHLPVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVL 364
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVKKRS 407
TDII GFP ETDE F +T++L +E F + PR GTPAA+MK VP V K+R
Sbjct: 365 TTDIIVGFPNETDEQFEETMSLYREVGFDTAFTFIYSPREGTPAAKMKDNVPMEVKKERL 424
Query: 408 RELTSV 413
+ L ++
Sbjct: 425 QRLNAL 430
>sp|B7HDP7|MIAB_BACC4 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacillus cereus (strain B4264) GN=miaB PE=3 SV=1
Length = 509
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 197/366 (53%), Gaps = 16/366 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG +A GY T ++E+AD+ L+NTC ++ +++ + +
Sbjct: 68 FYIRTYGCQMNEHDTEVMAGIFTALGYEPTFSTEDADVVLLNTCAIRENAENKVFGELGH 127
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
KS K+ + V GC+ Q ++ +++ + V +V G I R+ ++++ + E
Sbjct: 128 LKSLKRRNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNIHRLPYILKDAMFSKE 187
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
V + ++ +LPKVRR + I GC CTYC + RG S E ++
Sbjct: 188 TVVEVWSKEGDVIENLPKVRRGDIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQ 247
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
+R + A+G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 248 EIRHLAANGYKEITLLGQNVNAYGKDFE-DIEYGLGDLMDELRKVDIARIRFTTSHPRDF 306
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+HL E+ + + + +H+PVQSGS +L M R+Y+ + +V + E +P + +
Sbjct: 307 DDHLIEV--LGKGGNLVEHIHLPVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDVVL 364
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVKKRS 407
TDII GFP ETDE F +T++L +E F + PR GTPAA+MK VP V K+R
Sbjct: 365 TTDIIVGFPNETDEQFEETMSLYREVGFDTAFTFIYSPREGTPAAKMKDNVPMEVKKERL 424
Query: 408 RELTSV 413
+ L ++
Sbjct: 425 QRLNTL 430
>sp|B7JJ50|MIAB_BACC0 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacillus cereus (strain AH820) GN=miaB PE=3 SV=1
Length = 509
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 196/366 (53%), Gaps = 16/366 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG +A GY T ++E+AD+ L+NTC ++ +++ + +
Sbjct: 68 FYIRTYGCQMNEHDTEVMAGIFTALGYEPTFSTEDADVVLLNTCAIRENAENKVFGELGH 127
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
KS K+ + V GC+ Q ++ +++ + V +V G I R+ ++++ + E
Sbjct: 128 LKSLKRRNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNIHRLPYILKDAMFSKE 187
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
V + ++ +LPKVRR + I GC CTYC + RG S E ++
Sbjct: 188 TVVEVWSKEGDVIENLPKVRRGDIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQ 247
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
+R + A+G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 248 EIRHLAANGYKEITLLGQNVNAYGKDFE-DIEYGLGDLMDELRKVDIARIRFTTSHPRDF 306
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+HL E+ + + + +H+PVQSGS +L M R+Y+ + +V + E +P +
Sbjct: 307 DDHLIEV--LGKGGNLVEHIHLPVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVL 364
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVKKRS 407
TDII GFP ETDE F +T++L +E F + PR GTPAA+MK VP V K+R
Sbjct: 365 TTDIIVGFPNETDEQFEETMSLYREVGFDTAFTFIYSPREGTPAAKMKDNVPMEVKKERL 424
Query: 408 RELTSV 413
+ L ++
Sbjct: 425 QRLNAL 430
>sp|A0RHE4|MIAB_BACAH (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacillus thuringiensis (strain Al Hakam) GN=miaB PE=3
SV=2
Length = 509
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 196/366 (53%), Gaps = 16/366 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG +A GY T ++E+AD+ L+NTC ++ +++ + +
Sbjct: 68 FYIRTYGCQMNEHDTEVMAGIFTALGYEPTFSTEDADVVLLNTCAIRENAENKVFGELGH 127
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
KS K+ + V GC+ Q ++ +++ + V +V G I R+ ++++ + E
Sbjct: 128 LKSLKRRNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNIHRLPYILKDAMFSKE 187
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
V + ++ +LPKVRR + I GC CTYC + RG S E ++
Sbjct: 188 TVVEVWSKEGDVIENLPKVRRGDIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQ 247
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
+R + A+G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 248 EIRHLAANGYKEITLLGQNVNAYGKDFE-DIEYGLGDLMDELRKVDIARIRFTTSHPRDF 306
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+HL E+ + + + +H+PVQSGS +L M R+Y+ + +V + E +P +
Sbjct: 307 DDHLIEV--LGKGGNLVEHIHLPVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVL 364
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVKKRS 407
TDII GFP ETDE F +T++L +E F + PR GTPAA+MK VP V K+R
Sbjct: 365 TTDIIVGFPNETDEQFEETMSLYREVGFDTAFTFIYSPREGTPAAKMKDNVPMEVKKERL 424
Query: 408 RELTSV 413
+ L ++
Sbjct: 425 QRLNAL 430
>sp|Q81WR0|MIAB_BACAN (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacillus anthracis GN=miaB PE=3 SV=1
Length = 509
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 196/366 (53%), Gaps = 16/366 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG +A GY T ++E+AD+ L+NTC ++ +++ + +
Sbjct: 68 FYIRTYGCQMNEHDTEVMAGIFTALGYEPTFSTEDADVVLLNTCAIRENAENKVFGELGH 127
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
KS K+ + V GC+ Q ++ +++ + V +V G I R+ ++++ + E
Sbjct: 128 LKSLKRRNSDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNIHRLPYILKDAMFSKE 187
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
V + ++ +LPKVRR + I GC CTYC + RG S E ++
Sbjct: 188 TVVEVWSKEGDVIENLPKVRRGDIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQ 247
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
+R + A+G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 248 EIRHLAANGYKEITLLGQNVNAYGKDFE-DIEYGLGDLMDELRKVDIARIRFTTSHPRDF 306
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+HL E+ + + + +H+PVQSGS +L M R+Y+ + +V + E +P +
Sbjct: 307 DDHLIEV--LGKGGNLVEHIHLPVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVL 364
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVKKRS 407
TDII GFP ETDE F +T++L +E F + PR GTPAA+MK VP V K+R
Sbjct: 365 TTDIIVGFPNETDEQFEETMSLYREVGFDTAFTFIYSPREGTPAAKMKDNVPMEVKKERL 424
Query: 408 RELTSV 413
+ L ++
Sbjct: 425 QRLNAL 430
>sp|O69963|MIAB_STRCO (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2)
/ M145) GN=miaB PE=3 SV=1
Length = 505
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/375 (32%), Positives = 190/375 (50%), Gaps = 16/375 (4%)
Query: 57 GTETIYMKTFGCSHNQSDSEYMAGQLSAFGY--ALTDNSEEADIWLINTCTVKSPSQSAM 114
GT T ++T+GC N DSE ++G L GY A +AD+ + NTC V+ + + +
Sbjct: 12 GTRTYEVRTYGCQMNVHDSERLSGLLEDAGYVRAPEGADGDADVVVFNTCAVRENADNKL 71
Query: 115 DTLIAKC--KSAKKP---LVVAGCVPQGSRD--LKELEGVSIV-GVQQIDRVVEVVEETL 166
+ K A +P + V GC+ Q RD +K V +V G I ++ ++E
Sbjct: 72 YGNLGHLAPKKASRPGMQIAVGGCLAQKDRDTIVKRAPWVDVVFGTHNIGKLPVLLERAR 131
Query: 167 KGHEVRLLHRKKLPAL--DLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVE 224
E ++ + L A LP R + + + I+VGC CT+C RG
Sbjct: 132 VQEEAQVEIAESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFCIVPALRGKEKDRRPG 191
Query: 225 SLVGRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTN 284
++ V ++A+GV E+ L ++ AYG DIG + + A DG +R +
Sbjct: 192 DILAEVEALVAEGVSEITLLGQNVNAYGSDIG-DREAFSKLLRACGNIDGLERVRFTSPH 250
Query: 285 PPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVP 344
P + + IA + P LH+P+QSGSD VL AM R Y + +++ + +P
Sbjct: 251 PRDFTDDV--IAAMAETPNAMPQLHMPLQSGSDPVLKAMRRSYRQERYLGIIEKVRAAIP 308
Query: 345 GMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVV 403
I TDII GFPGET+EDF QT+++++E +F Q Q+ RPGTPAA M+ ++P AVV
Sbjct: 309 HAAITTDIIVGFPGETEEDFEQTLHVVREARFAQAFTFQYSKRPGTPAAEMENQIPKAVV 368
Query: 404 KKRSRELTSVFEAFT 418
++R L ++ E +
Sbjct: 369 QERYERLVALQEEIS 383
>sp|A9BGV7|MIAB_PETMO (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=miaB
PE=3 SV=1
Length = 439
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 186/364 (51%), Gaps = 13/364 (3%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA- 119
Y++TFGC N ++SE MAG L G+ T+N +EADI LIN+C V+ +++ M I
Sbjct: 3 FYIRTFGCQMNINESEIMAGLLKEEGFEWTENPKEADIILINSCAVREKAENKMYGAIGG 62
Query: 120 --KCKSAKKPLV--VAGCVPQGSRD--LKELEGVSIV-GVQQIDRVVEVVEETLKGHEVR 172
K K K L+ V GC + R+ L+ + + V G + + + +V+ L G
Sbjct: 63 YGKLKDENKNLILGVGGCSAEKERENLLERFKNIDFVFGTRNVVDIGNLVKRALNGKRFA 122
Query: 173 LLHRK-KLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
K D+PK+ +K + I GC C+YC + RG S +E ++ V
Sbjct: 123 DFSDKLNDVNYDIPKMPISKHHAWITIIYGCNKYCSYCIVPYTRGFEKSRPMEDIIREVE 182
Query: 232 TVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEH 291
+ G KE+ ++ +YG+D G L I D + + P I +
Sbjct: 183 SYAKKGYKEITFLGQNVDSYGKDFGDKKSKLDLLIQKAAEFDSIKRIWFLTSYPSDITDS 242
Query: 292 LKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATD 351
L I V ++ H+P QSGS+ +L AMNR+YT +F +V+ + + V + +++D
Sbjct: 243 L--IQTVANEEKAANYFHLPAQSGSNKILKAMNRKYTREEFIELVNKVKKEVANVTVSSD 300
Query: 352 IICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKK--VPSAVVKKRSRE 409
I GFP ETDEDF +TV+LIK+ +F +++I+++ PR GT A + + VP + KR +
Sbjct: 301 FITGFPSETDEDFEETVDLIKQCRFERINIAEYSPREGTIAYKYQNDDVPKHIKNKRLQY 360
Query: 410 LTSV 413
L +
Sbjct: 361 LMEL 364
>sp|Q3M8N9|MIAB_ANAVT (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
GN=miaB PE=3 SV=1
Length = 454
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 202/396 (51%), Gaps = 31/396 (7%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
++ TFGC N++DSE MAG L G+ +++ AD+ L NTCT++ ++ + + + +
Sbjct: 9 HITTFGCQMNKADSERMAGILEDMGFEFSEDPNNADVILYNTCTIRDNAEQKVYSYLGRQ 68
Query: 122 KSAKKP-----LVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEVRL 173
K LVVAGCV Q G L+ + + +V G Q +R+ +++E G++V
Sbjct: 69 AKRKHEQPDLTLVVAGCVAQQEGEALLRRVPELDLVMGPQHANRLKDLLESVFAGNQVVA 128
Query: 174 LHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
+ D+ + RR+ V +NV GC CTYC + RG S T E++ +
Sbjct: 129 TEAVHIME-DITQARRDSTVTAW-VNVIYGCNERCTYCVVPNVRGVEQSRTPEAVRAEME 186
Query: 232 TVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAI--VAELPPDGSTMLRIGMT 283
+ G KE+ L ++ AYGRD+ G +L + + V ++P G +R +
Sbjct: 187 ELGRQGYKEITLLGQNIDAYGRDLPGATPEGRHLHTFTDLLYYVHDVP--GIERIRFATS 244
Query: 284 NPPFILEHL-KEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIEL 342
+P + E L K AE+ P V H+P QSG + +L AM R YT +R ++DT+
Sbjct: 245 HPRYFTERLIKACAEL---PKVCEHFHIPFQSGDNQLLKAMARGYTQEKYRRIIDTIRRY 301
Query: 343 VPGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMKKVPSAV 402
+P I+ D I GFPGET+E F T+ L+ + F Q++ + + PRPGTPAA + S
Sbjct: 302 MPDASISADAIVGFPGETEEQFENTLKLVDDIGFDQLNTAAYSPRPGTPAALWENQLSEE 361
Query: 403 VK----KRSRELTSVFEAFTPYLGMEGRVERIWITE 434
K +R L +V A M GR+E + + E
Sbjct: 362 TKSDRLQRLNHLVNVKAAERSQRYM-GRIEEVLVEE 396
>sp|Q812Y0|MIAB_BACCR (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=miaB
PE=3 SV=1
Length = 509
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 196/366 (53%), Gaps = 16/366 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG +A GY T ++E+AD+ L+NTC ++ +++ + +
Sbjct: 68 FYIRTYGCQMNEHDTEVMAGIFTALGYEPTFSTEDADVVLLNTCAIRENAENKVFGELGH 127
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
KS K+ + V GC+ Q ++ +++ + V +V G I R+ ++++ + E
Sbjct: 128 LKSLKRRNPDFLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNIHRLPYILKDAMFSKE 187
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
V + ++ +LPKVRR + I GC CTYC + RG S E ++
Sbjct: 188 TVVEVWSKEGDVIENLPKVRRGDIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQ 247
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
+R + A+G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 248 EIRHLAANGYKEITLLGQNVNAYGKDFE-DIEYGLGDLMDELRKVDIARIRFTTSHPRDF 306
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+HL E+ + + + +H+PVQSGS +L M R+Y+ + +V + E +P +
Sbjct: 307 DDHLIEV--LGKGGNLVEHIHLPVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDAVL 364
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVKKRS 407
TDII GFP ETDE F +T++L +E F + PR GTPAA+MK VP V K+R
Sbjct: 365 TTDIIVGFPNETDEQFEETMSLYREVGFDTAFTFIYSPREGTPAAKMKDNVPMEVKKERL 424
Query: 408 RELTSV 413
+ L ++
Sbjct: 425 QRLNTL 430
>sp|A4XL48|MIAB_CALS8 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=miaB PE=3 SV=1
Length = 471
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 201/392 (51%), Gaps = 22/392 (5%)
Query: 58 TETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTL 117
+T ++ T+GC N DSE +AG L+A GY T N EEAD+ + NTC V+ ++S +
Sbjct: 35 NKTYHIITYGCQMNVHDSEKLAGMLNAMGYVETQNLEEADLIIFNTCAVREHAESRVYGN 94
Query: 118 IAKCK--SAKKP---LVVAGCVPQGSRDLKELEGVS-----IVGVQQIDRVVEVVEE--T 165
I K KKP + V GC+PQ ++L V I G + + + +++ + T
Sbjct: 95 IGPLKRLKDKKPELIIGVCGCMPQQLEVAQKLAKVFPFLDIIFGTKSLHKFPQLLYKAIT 154
Query: 166 LKGHEVRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVES 225
K + + + + +P RR + I GC C+YC + RG S E
Sbjct: 155 TKKTVIDVAEDEDVVVEGIPTARREGVSAFVNIIYGCNNFCSYCIVPYVRGRERSRRPEE 214
Query: 226 LVGRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPI--LLNAIVAELPPDGSTMLRIGMT 283
++ ++ + A+GVKEV L ++ +YG+D+ +P LL + A +G +R +
Sbjct: 215 IIFEIQQLAANGVKEVTLLGQNVNSYGKDLPDGIPFYKLLEKVNA---IEGIERIRFVTS 271
Query: 284 NPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELV 343
+P + + L L C + +H+PVQSGS +L MNR YT D+ +V+ L E +
Sbjct: 272 HPKDLSDELIFAMRDLEKVCEH--IHLPVQSGSTRILRQMNRHYTKEDYLRLVEKLKENI 329
Query: 344 PGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARM-KKVPSAV 402
P + I TDII GFPGET+EDF T++++++ +F + + R GT AA+M +VP V
Sbjct: 330 PDIAITTDIIVGFPGETEEDFEDTLDVVRKVEFDSAYTFIYSKRKGTKAAQMPNQVPDEV 389
Query: 403 VKKRSRELTSVFE--AFTPYLGMEGRVERIWI 432
+R + L + E A M G+V I I
Sbjct: 390 KHERFQRLVKLVEEIALKKNQQMLGKVCEILI 421
>sp|A4T007|MIAB_POLSQ (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Polynucleobacter necessarius subsp. asymbioticus
(strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) GN=miaB
PE=3 SV=1
Length = 448
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 210/400 (52%), Gaps = 22/400 (5%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSA-FGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA 119
+Y+KTFGC N+ DS MA L A G +TD E+AD+ L+NTC+++ ++ + + +
Sbjct: 4 LYIKTFGCQMNEYDSGKMADLLHADEGMVMTDTPEDADVVLLNTCSIREKAEDKVFSDLG 63
Query: 120 KCKSAKKP-----LVVAGCVP--QGSRDLKELEGVSIV-GVQQIDRVVEVVEETLK-GHE 170
+ + KK + V GCV +G + + V +V G Q + R+ +++ + K G
Sbjct: 64 RLRELKKTKPHMLIGVGGCVASQEGRQIVSRAPYVDVVFGPQTLHRLSDLIAQRRKTGLS 123
Query: 171 VRLLHRKKLPALD-LPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGR 229
+ ++ D LP R+ + + I GC C+YC + RG S + ++
Sbjct: 124 QVDISFPEIEKFDHLPASRQTRGSAYVSIMEGCSKYCSYCVVPYTRGEEVSRPFDDVLTE 183
Query: 230 VRTVIADGVKEVWLSSEDTGAYGRDIGVNLPI----LLNAIVAELPPDGSTMLRIGMTNP 285
V + + GVKE+ L ++ AY +G I LL +AE+P G +R ++P
Sbjct: 184 VAGLASKGVKEIVLLGQNVNAYLGKMGDAEEIADFALLIEYIAEIP--GVERIRFTTSHP 241
Query: 286 PFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPG 345
+ L ++ + P + S LH+PVQ GSD++LSAM R YT ++++++ + + P
Sbjct: 242 KEFTQRLIDV--YAKVPKLVSHLHLPVQHGSDSILSAMKRGYTALEYKSIIRKMRAVRPD 299
Query: 346 MQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARMK-KVPSAVVK 404
+ +++D I GFPGETD DF + + +++E F F PRPGTPAA + P V
Sbjct: 300 LTLSSDFIVGFPGETDADFEKLLKMVQELDFDNSFCFIFSPRPGTPAANLSDDTPYEVKL 359
Query: 405 KRSRELTSVFEAFTPYLG--MEGRVERIWITEIAADGIHL 442
KR + L ++ E + + M G+ ER+ I +A DG++L
Sbjct: 360 KRLQTLLALIEGQSNQISQKMLGKTERVLIEGLAKDGVNL 399
>sp|B1XS06|MIAB_POLNS (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Polynucleobacter necessarius subsp. necessarius
(strain STIR1) GN=miaB PE=3 SV=1
Length = 448
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 209/403 (51%), Gaps = 28/403 (6%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSA-FGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA 119
+Y+KTFGC N+ DS MA L A G +TD E+AD+ L+NTC+++ ++ + + +
Sbjct: 4 LYIKTFGCQMNEYDSGKMADLLHADEGMVMTDRPEDADVVLLNTCSIREKAEDKVFSDLG 63
Query: 120 KCKSAKKP-----LVVAGCVP--QGSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEV 171
+ + KK + V GCV +G + + V +V G Q + R+ +++ K E
Sbjct: 64 RLRELKKTKPNLLIGVGGCVASQEGQQIVSHAPYVDVVFGPQTLHRLSDLIA---KRRET 120
Query: 172 RLLHRK-KLPALD----LPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESL 226
L P ++ LP R+ + + I GC C+YC + RG S + + +
Sbjct: 121 GLFQVDISFPEIEKFDHLPASRQTRGSAYVSIMEGCSKYCSYCVVPYTRGEEVSRSFDDV 180
Query: 227 VGRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPI----LLNAIVAELPPDGSTMLRIGM 282
+ V + + GVKE+ L ++ AY +G I LL + E+P G +R
Sbjct: 181 LTEVAGLASKGVKEIVLLGQNVNAYLGKMGDRQEIADFALLIEYIVEIP--GVERIRFTT 238
Query: 283 TNPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIEL 342
++P + L ++ + P + S LH+PVQ GSDA+LSAM R YT +F++++ + +
Sbjct: 239 SHPKEFTQRLIDV--YTKVPKLVSHLHLPVQHGSDAMLSAMKRGYTALEFKSIIRKMRAV 296
Query: 343 VPGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGTPAARM-KKVPSA 401
P + +++D I GFPGET+ DF + + +++E F F PRPGTPAA + P
Sbjct: 297 RPDLTLSSDFIVGFPGETEADFEKLLKMVEELNFDNSFCFIFSPRPGTPAANLHDDTPYE 356
Query: 402 VVKKRSRELTSVFEAFTPYLG--MEGRVERIWITEIAADGIHL 442
V KR + L ++ E+ + M G +ER+ I +A DGI+L
Sbjct: 357 VKLKRLQTLLALVESQANQISQKMLGNIERVLIEGLAKDGINL 399
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,568,473
Number of Sequences: 539616
Number of extensions: 7731485
Number of successful extensions: 23515
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 19949
Number of HSP's gapped (non-prelim): 1162
length of query: 448
length of database: 191,569,459
effective HSP length: 121
effective length of query: 327
effective length of database: 126,275,923
effective search space: 41292226821
effective search space used: 41292226821
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)