Query 013203
Match_columns 447
No_of_seqs 150 out of 1352
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 06:08:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013203.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013203hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtk_A 60 kDa chaperonin 2; he 100.0 5E-102 2E-106 820.4 37.4 438 5-447 52-514 (546)
2 1kp8_A Groel protein; chaperon 100.0 1E-100 4E-105 811.7 40.9 436 5-447 52-516 (547)
3 1we3_A CPN60(groel); chaperoni 100.0 1.8E-99 6E-104 803.2 43.7 436 5-447 52-518 (543)
4 1iok_A Chaperonin 60; chaperon 100.0 2E-100 6E-105 810.7 34.2 437 5-447 53-518 (545)
5 3p9d_C T-complex protein 1 sub 100.0 8.5E-85 2.9E-89 695.1 28.2 412 5-447 61-579 (590)
6 3iyg_H T-complex protein 1 sub 100.0 2.2E-82 7.6E-87 670.0 37.8 385 5-447 53-507 (515)
7 3ruv_A Chaperonin, CPN; double 100.0 2.1E-82 7.1E-87 674.1 36.3 382 5-447 61-512 (543)
8 3ko1_A Chaperonin; 9-fold symm 100.0 1.8E-82 6.2E-87 674.9 35.6 382 5-447 72-526 (553)
9 3iyg_B T-complex protein 1 sub 100.0 4E-82 1.4E-86 668.2 38.0 381 5-447 54-504 (513)
10 3aq1_B Thermosome subunit; gro 100.0 2.2E-82 7.4E-87 668.3 35.5 382 5-447 15-469 (500)
11 3p9d_A T-complex protein 1 sub 100.0 1E-82 3.4E-87 678.2 30.9 387 5-447 66-541 (559)
12 1q3q_A Thermosome alpha subuni 100.0 1.1E-81 3.7E-86 669.3 36.0 382 5-447 65-518 (548)
13 1a6d_A Thermosome (alpha subun 100.0 1.4E-81 4.8E-86 668.0 34.8 381 5-447 64-515 (545)
14 3iyg_A T-complex protein 1 sub 100.0 3.2E-81 1.1E-85 663.6 37.1 387 5-447 52-521 (529)
15 1a6d_B Thermosome (beta subuni 100.0 2.1E-81 7.1E-86 666.8 34.8 382 5-447 63-516 (543)
16 3p9d_D T-complex protein 1 sub 100.0 4.4E-82 1.5E-86 669.5 28.7 386 5-447 61-521 (528)
17 3iyg_E T-complex protein 1 sub 100.0 1.1E-80 3.7E-85 657.9 38.7 389 5-447 52-508 (515)
18 3iyg_D T-complex protein 1 sub 100.0 7.3E-81 2.5E-85 659.3 36.3 382 5-447 53-511 (518)
19 3iyg_Q T-complex protein 1 sub 100.0 5.4E-80 1.9E-84 652.1 37.4 388 5-447 53-505 (512)
20 3iyg_G T-complex protein 1 sub 100.0 1.5E-79 5.2E-84 648.8 37.9 382 5-447 51-507 (515)
21 3p9d_G T-complex protein 1 sub 100.0 2E-81 7E-86 667.0 23.0 384 5-447 66-520 (550)
22 3p9d_E T-complex protein 1 sub 100.0 4.9E-80 1.7E-84 657.9 32.0 388 5-447 87-551 (562)
23 3p9d_B T-complex protein 1 sub 100.0 5.9E-81 2E-85 661.6 23.9 381 5-447 60-511 (527)
24 3iyg_Z T-complex protein 1 sub 100.0 5.7E-79 2E-83 644.3 34.5 381 5-447 52-510 (517)
25 3p9d_F T-complex protein 1 sub 100.0 1.3E-78 4.6E-83 645.7 26.7 382 5-447 59-530 (546)
26 3p9d_H T-complex protein 1 sub 100.0 3.9E-78 1.3E-82 644.0 16.3 382 5-447 68-541 (568)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 2.9E-50 9.8E-55 363.3 14.3 189 140-328 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 1.2E-48 4.1E-53 353.3 15.8 185 143-327 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 3.2E-39 1.1E-43 278.5 14.8 144 145-288 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 2.9E-23 9.8E-28 189.7 13.4 144 139-336 3-174 (178)
31 1ass_A Thermosome; chaperonin, 99.8 9.7E-20 3.3E-24 163.2 13.9 127 143-292 1-154 (159)
32 3swy_A Cyclic nucleotide-gated 20.6 88 0.003 21.2 3.1 11 312-322 33-43 (46)
No 1
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=4.9e-102 Score=820.38 Aligned_cols=438 Identities=32% Similarity=0.474 Sum_probs=404.6
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||++++. ..+++++|++||+|+||||||+||||++||++++++++ |+||+.|++||++|++.++++
T Consensus 52 G~TIlk~i~v~hp~~n~g--Akll~e~a~~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~ 129 (546)
T 3rtk_A 52 GVSIAKEIELEDPYEKIG--AELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTET 129 (546)
T ss_dssp ---------CCCHHHHHH--HHHHHHHHTSCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCChhhhHH--HHHHHHHHHhhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 358999999999994432 44558999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhcccccceeecCCcccceeEEEeeEEEeecccCccccccccc
Q 013203 84 LDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFTHKNK 163 (447)
Q Consensus 84 L~~~~~~v~~~~~l~~va~ts~~~~~~l~~li~~A~~~vg~~~~I~v~~g~~~~d~~~~~~G~~~~~g~~~p~~~~~~~~ 163 (447)
|+++++|+++.++|.++|++|++ ++.+++++++|+.+++++|.|+|+.+++..+++++++||+|+++|.||||+++|++
T Consensus 130 L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~ 208 (546)
T 3rtk_A 130 LLKGAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPER 208 (546)
T ss_dssp HHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTT
T ss_pred HHHhcccCCChHHHHhHeEEeCC-chHHHHHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCccc
Confidence 99999999999999999999998 88999999999999999999999988888788999999999999999999999999
Q ss_pred ceeeecCcEEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHH
Q 013203 164 KECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIME 243 (447)
Q Consensus 164 ~~~~l~~p~Il~~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le 243 (447)
|+.+++||+|+++|++|+++++++++++++.++|+||||++++|+++|+++|+.|+++|+++|++||+|+||++|+++|+
T Consensus 209 m~~~len~kIll~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le 288 (546)
T 3rtk_A 209 QEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQ 288 (546)
T ss_dssp TBEEEESCEEEEBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHH
T ss_pred CeeEecccEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEeCCCChhhHHHHHHHHHHHhhhccc----HHHHHHHh
Q 013203 244 DLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLA 319 (447)
Q Consensus 244 ~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~----~~l~eR~a 319 (447)
|||++|||++++++.|++++++++++||+|++|++++++++||+||+++++++.|+++|++++++++| ++|+||++
T Consensus 289 ~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erla 368 (546)
T 3rtk_A 289 DMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLA 368 (546)
T ss_dssp HHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHH
T ss_pred HHHHHhCCEEeeccccCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988 99999999
Q ss_pred hhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCChhHHHHHHHHHHHHhcCCCchhHHHHHHHHHHH---
Q 013203 320 KLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNAL--- 396 (447)
Q Consensus 320 ~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~~~~~i~~~a~AL--- 396 (447)
+|+|++|||+|||+|+.+++|+||++|||||++|+++++|+|||||++|+++|.+|++|+ .++++|+|+++|++||
T Consensus 369 kl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~giVpGGGa~e~~~s~~L~~~~-~~g~eq~~i~~~a~ALe~i 447 (546)
T 3rtk_A 369 KLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAAPTLDELK-LEGDEATGANIVKVALEAP 447 (546)
T ss_dssp HHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHTTGGGSTTSC-CCTTHHHHHHHHHHHTTHH
T ss_pred HhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999988 7899999999999999
Q ss_pred -----------------HhhhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 397 -----------------KLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 397 -----------------kl~~~~~~~~G~d~~~~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
++++. ..++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 448 p~~La~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~i 514 (546)
T 3rtk_A 448 LKQIAFNSGLEPGVVAEKVRNL-PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTT 514 (546)
T ss_dssp HHHHHTTTTCCHHHHHHHHHHS-CTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCHHHHHHHHHhh-cCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 34333 345999999999999999999999999999999999999999986
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1.1e-100 Score=811.65 Aligned_cols=436 Identities=34% Similarity=0.507 Sum_probs=421.4
Q ss_pred HHHHhhhccccCc----cccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (447)
Q Consensus 5 ~~~il~~~~~~~p----~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~ 79 (447)
..||||+|+++|| +||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.
T Consensus 52 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~ 125 (547)
T 1kp8_A 52 GVSVAREIELEDKFENMGAQMV------KEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTV 125 (547)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccccChhhhHHHHHH------HHHHHhhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 4689999999999 77766 8999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhcccccceeecCCcccceeEEEeeEEEeecccCccccc
Q 013203 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (447)
Q Consensus 80 ~~~~L~~~~~~v~~~~~l~~va~ts~~~~~~l~~li~~A~~~vg~~~~I~v~~g~~~~d~~~~~~G~~~~~g~~~p~~~~ 159 (447)
++++|+++++|+++.++|.++|++|++++++|++++++|+.+++++|.|+|++|++++|++++++||+|++||.||||++
T Consensus 126 a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt 205 (547)
T 1kp8_A 126 AVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFIN 205 (547)
T ss_dssp HHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCS
T ss_pred HHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCcccccccc
Confidence 99999999999998899999999999889999999999999999999999999999988779999999999999999999
Q ss_pred ccccceeeecCcEEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhHHHHHHHhccCCCCceEEEeccCcccchh
Q 013203 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (447)
Q Consensus 160 ~~~~~~~~l~~p~Il~~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~ 239 (447)
+|++|+.+++||+|+++|++|+++++++++++++.++|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++|+
T Consensus 206 ~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk 285 (547)
T 1kp8_A 206 KPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRK 285 (547)
T ss_dssp BTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHH
T ss_pred CcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEeCCCChhhHHHHHHHHHHHhhhccc----HHHH
Q 013203 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (447)
Q Consensus 240 ~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~----~~l~ 315 (447)
++|+|||++|||++++++.|++++++++++||+|+.|++++++|+||+||+++++++.|+++++.++++++| |+|+
T Consensus 286 ~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 365 (547)
T 1kp8_A 286 AMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQ 365 (547)
T ss_dssp HHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHH
T ss_pred HHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHH
Confidence 999999999999999998888999999999999999999999999999999999999999999999999988 9999
Q ss_pred HHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCChhHHHHHHHHHHHHhcCCCchhHHHHHHHHHH
Q 013203 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (447)
Q Consensus 316 eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~~~~~i~~~a~A 395 (447)
||+++|+|++|||+|||+|+.+++|+||++|||||++|+++++|+|||||++|++++..|++++..++++|+|+++|++|
T Consensus 366 erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~A 445 (547)
T 1kp8_A 366 ERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNADQNVGIKVALRA 445 (547)
T ss_dssp HHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCCEEeCCcHHHHHHHHHHHHHhccCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998876788999999999999
Q ss_pred H--------------------HhhhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 396 L--------------------KLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 396 L--------------------kl~~~~~~~~G~d~~~~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
| ++++. +.++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 446 Le~ip~~la~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~i 516 (547)
T 1kp8_A 446 MEAPLRQIVLNCGEEPSVVANTVKGG-DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITT 516 (547)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHHS-CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhc-CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhH
Confidence 9 44433 468999999999999999999999999999999999999999986
No 3
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.8e-99 Score=803.22 Aligned_cols=436 Identities=34% Similarity=0.517 Sum_probs=420.8
Q ss_pred HHHHhhhccccCc----cccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (447)
Q Consensus 5 ~~~il~~~~~~~p----~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~ 79 (447)
..||||+|++.|| +||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.
T Consensus 52 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~ 125 (543)
T 1we3_A 52 GVTVAKEVELEDHLENIGAQLL------KEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEA 125 (543)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCChHHhHHHHHH------HHHHHhhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 4689999999999 87766 8999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhcccccceeecCCcccceeEEEeeEEEeecccCccccc
Q 013203 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (447)
Q Consensus 80 ~~~~L~~~~~~v~~~~~l~~va~ts~~~~~~l~~li~~A~~~vg~~~~I~v~~g~~~~d~~~~~~G~~~~~g~~~p~~~~ 159 (447)
++++|+++++|+++.++|.++|++|++ +++|++++++|+.+++++|.|+|++|++++|++++++|++|++||.||||++
T Consensus 126 a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt 204 (543)
T 1we3_A 126 AVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVT 204 (543)
T ss_dssp HHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCS
T ss_pred HHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCcccccccc
Confidence 999999999999988999999999998 8999999999999999999999999999988779999999999999999999
Q ss_pred ccccceeeecCcEEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhHHHHHHHhccCCCCceEEEeccCcccchh
Q 013203 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (447)
Q Consensus 160 ~~~~~~~~l~~p~Il~~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~ 239 (447)
+|++|+.+++||+|+++|++|+++++++++++++.++|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++|+
T Consensus 205 ~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~ 284 (543)
T 1we3_A 205 NPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRK 284 (543)
T ss_dssp BTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHH
T ss_pred CcccCceeecCceEEEECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEeCCCChhhHHHHHHHHHHHhhhccc----HHHH
Q 013203 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (447)
Q Consensus 240 ~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~----~~l~ 315 (447)
++|+|||++|||++++++.|++++++++++||+|+.|++++++++||+||+++++++.|+++++.++++++| ++|+
T Consensus 285 ~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~ 364 (543)
T 1we3_A 285 EMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQ 364 (543)
T ss_dssp HHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHH
T ss_pred HHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888 9999
Q ss_pred HHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCChhHHHHHHHHHHHHhcCC-CchhHHHHHHHHH
Q 013203 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQN 394 (447)
Q Consensus 316 eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~~~gvVpGGGa~e~~~s~~L~~~~~~-~~~~~~~i~~~a~ 394 (447)
||+++|+|++|||+|||+|+.+++|+||++|||||++|+++++|+|||||++|++++..|++++.. ++++|+|+++|++
T Consensus 365 erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ 444 (543)
T 1we3_A 365 ERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRR 444 (543)
T ss_dssp HHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999874 8999999999999
Q ss_pred HH--------------------Hhhhc-CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 395 AL--------------------KLLEQ-DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 395 AL--------------------kl~~~-~~~~~G~d~~~~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
|| ++++. ++.++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 445 ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 518 (543)
T 1we3_A 445 ALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTT 518 (543)
T ss_dssp HTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 99 34331 4578999999999999999999999999999999999999999986
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.7e-100 Score=810.70 Aligned_cols=437 Identities=35% Similarity=0.529 Sum_probs=379.2
Q ss_pred HHHHhhhccccCc----cccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (447)
Q Consensus 5 ~~~il~~~~~~~p----~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~ 79 (447)
..||||+|++.|| +||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.
T Consensus 53 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~ 126 (545)
T 1iok_A 53 GVSVAKEIELSDKFENMGAQMV------REVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAK 126 (545)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCChhhHHHHHHH------HHHHHhhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 3689999999999 88866 8999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhcccccceeecCCcccceeEEEeeEEEeecccCccccc
Q 013203 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (447)
Q Consensus 80 ~~~~L~~~~~~v~~~~~l~~va~ts~~~~~~l~~li~~A~~~vg~~~~I~v~~g~~~~d~~~~~~G~~~~~g~~~p~~~~ 159 (447)
++++|+++++|+++.++|.++|++|++++++|++++++|+.+++++|.|+|++|++++|++++++|++|++||.||||++
T Consensus 127 a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt 206 (545)
T 1iok_A 127 VVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVT 206 (545)
T ss_dssp HHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCC
T ss_pred HHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCcccccccc
Confidence 99999999999988889999999999989999999999999999999999999999988779999999999999999999
Q ss_pred ccccceeeecCcEEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhHHHHHHHhccCCCCceEEEeccCcccchh
Q 013203 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (447)
Q Consensus 160 ~~~~~~~~l~~p~Il~~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~ 239 (447)
+|++|+.+++||+|+++|++|+++++++++++++.++|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++|+
T Consensus 207 ~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~ 286 (545)
T 1iok_A 207 NADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRK 286 (545)
T ss_dssp CSSSSCEEEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC-----------------CEEEECSCCTTHHH
T ss_pred CcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEeCCCChhhHHHHHHHHHHHhhhccc----HHHH
Q 013203 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (447)
Q Consensus 240 ~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~----~~l~ 315 (447)
++|+|||++|||++++++.|++++++++++||+|++|++++++|+||+||++++++++|+++++++++.++| ++|+
T Consensus 287 ~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 366 (545)
T 1iok_A 287 AMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQ 366 (545)
T ss_dssp HHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHH
T ss_pred HHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888 9999
Q ss_pred HHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCChhHHHHHHHHHHHHhcCCCchhHHHHHHHHHH
Q 013203 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (447)
Q Consensus 316 eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~~~~~i~~~a~A 395 (447)
||+++|+|++|||+|||+|+.+++|+||++|||||++|+++++|+|||||++|++++.+|++++..++++|+|+++|++|
T Consensus 367 erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~A 446 (545)
T 1iok_A 367 ERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRA 446 (545)
T ss_dssp HHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHGGGGGSCCCSSHHHHHHHHHHHHH
T ss_pred HHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhccCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998876788999999999999
Q ss_pred H--------------------HhhhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 396 L--------------------KLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 396 L--------------------kl~~~~~~~~G~d~~~~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
| ++++..++++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 447 Le~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~i 518 (545)
T 1iok_A 447 LEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITT 518 (545)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhH
Confidence 9 343332568999999999999999999999999999999999999999986
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=8.5e-85 Score=695.12 Aligned_cols=412 Identities=13% Similarity=0.141 Sum_probs=341.5
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHh-cC-CCChHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKA-LG-RANLTGLTQGFRMAADAVVR 82 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~l-i~-G~~P~~I~~G~~~A~~~~~~ 82 (447)
..||||+|++.||+||++ +++|++||+++||||||+||||++||++|+++ ++ |+||+.|++||++|++.+++
T Consensus 61 G~TIlk~i~~~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~ 134 (590)
T 3p9d_C 61 GHAILREIDVAHPAAKSM------LELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALE 134 (590)
T ss_dssp HHHHHHHSCCCCHHHHTH------HHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCHHHHHH------HHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHH
Confidence 468999999999999988 79999999999999999999999999999999 99 99999999999999999999
Q ss_pred HHhccccccCC--HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccccc----------------ceee--cCCcc
Q 013203 83 NLDCQARKITT--FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWENDL----------------ITIF--DRKAL 136 (447)
Q Consensus 83 ~L~~~~~~v~~--~~~l~~va~ts~~------~~~~l~~li~~A~~~vg~~~~----------------I~v~--~g~~~ 136 (447)
+|+++++|++. .+.|.++|+||.+ +++.|++++++|+.+|++++. |+|+ +|+++
T Consensus 135 ~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~ 214 (590)
T 3p9d_C 135 VIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDV 214 (590)
T ss_dssp HHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCG
T ss_pred HHHHHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCc
Confidence 99999999873 6889999998764 368899999999999987642 4454 58887
Q ss_pred cceeEEEeeEEEeecccCcccccccccceeeecCcEEEEeccc-------------cCCHHHHHHHH-----------HH
Q 013203 137 YNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVIRQAS-----------LP 192 (447)
Q Consensus 137 ~d~~~~~~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~~~~~l-----------e~ 192 (447)
. ++++++||+|++++.+|.| +.+++||+|+++|++ |++++++.+++ ++
T Consensus 215 ~-ds~lv~Gmvfdk~~~~~~m-------~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vek 286 (590)
T 3p9d_C 215 L-DSRVLKGVLLNKDVVHPKM-------SRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQ 286 (590)
T ss_dssp G-GCBCCSSEEECCCCSCTTS-------CSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred c-cceeeeEEEEecccCCCCC-------cceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5 5899999999999888855 447999999999984 45666666654 68
Q ss_pred HHhcCCCEEEEecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCcee
Q 013203 193 CMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS 272 (447)
Q Consensus 193 i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~ 272 (447)
+.++|++|||+.++|+++|+++|..|+ |++++ ++++++|+|||++|||+++++ ++++++++||+
T Consensus 287 I~~~g~~vII~e~~I~d~Al~~L~k~~------I~av~-----~~~k~~le~ia~~TGa~iis~-----l~~~~~~~LG~ 350 (590)
T 3p9d_C 287 ILAVRPTLVITEKGVSDLAQHYLLKGG------CSVLR-----RVKKSDNNRIARVTGATIVNR-----VEDLKESDVGT 350 (590)
T ss_dssp HHTTCCSEECCSSCCCTHHHHHHHHTT------CCCCC-----CCCHHHHHHHHHHHTCCCCSC-----STTCCTTSCBC
T ss_pred HHhcCCcEEEecCCcCHHHHHHHHhcc------ceeec-----cCCHHHHHHHHHHhCCceeec-----ccCCCHHHhCC
Confidence 888987777777789999999999764 56654 678889999999999999996 89999999999
Q ss_pred -eeEEE---EecceEEEEeCCCChhh--------------------------HHHHHHHHHHHhhhcccHHHHHHHhhhc
Q 013203 273 -CKRVI---ATMDNVVIIGGSGELVD--------------------------IQERCEQLRSTIKLSTSDKLKDRLAKLS 322 (447)
Q Consensus 273 -a~~v~---i~~~~~~~i~g~~~~~~--------------------------i~~r~~~l~~~~~~~~~~~l~eR~a~l~ 322 (447)
|+.|+ +++++|+||+||+++++ ++.|+++++++++.++|+ +.+|+++|+
T Consensus 351 ~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~-~~~~~~~l~ 429 (590)
T 3p9d_C 351 NCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGH-HHHHHHHGS 429 (590)
T ss_dssp CCSEEECCEETTEECEEECC----------------------------------------------------------CC
T ss_pred cCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCH-HHHHHHhhc
Confidence 99996 68899999999999888 999999999999888773 236689999
Q ss_pred CCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhc-CCcCChhHHHHHHHHHHHHhcC-CCchhHHHHHHHHHHH----
Q 013203 323 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQT-TNSDQKIGVQIVQNAL---- 396 (447)
Q Consensus 323 g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~~~-gvVpGGGa~e~~~s~~L~~~~~-~~~~~~~~i~~~a~AL---- 396 (447)
|++|||+|||+|+.+++|+||++|||||++|+++++ |+|||||++|+++|.+|++|+. .++++|+|+++|++||
T Consensus 430 ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip 509 (590)
T 3p9d_C 430 GKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIP 509 (590)
T ss_dssp CSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHH
T ss_pred CCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 5999999999999999999876 5899999999999999
Q ss_pred ----------------Hhhh---cCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 397 ----------------KLLE---QDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 397 ----------------kl~~---~~~~~~G~d~~~~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
++++ ++++++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 510 ~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 579 (590)
T 3p9d_C 510 RTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRV 579 (590)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHH
Confidence 3432 35678999999999999999999999999999999999999999986
No 6
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.2e-82 Score=670.00 Aligned_cols=385 Identities=13% Similarity=0.130 Sum_probs=347.8
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|++.++++
T Consensus 53 G~tIlk~i~v~hP~Akll------~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 126 (515)
T 3iyg_H 53 GATILKLLDVVHPAAKTL------VDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNK 126 (515)
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHhhceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--C----HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccc---ccceee--cCCcccceeEEEeeE
Q 013203 84 LDCQARKIT--T----FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITIF--DRKALYNELNFVKGM 146 (447)
Q Consensus 84 L~~~~~~v~--~----~~~l~~va~ts~~------~~~~l~~li~~A~~~vg~~---~~I~v~--~g~~~~d~~~~~~G~ 146 (447)
|+++++|++ + .+.|.++|+||++ +++.|++++++|+.+++.+ +.|+|+ .|++.. ++++++||
T Consensus 127 L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~-ds~lv~G~ 205 (515)
T 3iyg_H 127 IKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALE-ESQLVAGV 205 (515)
T ss_pred HHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCcc-ceEEEeee
Confidence 999999984 5 5667999998774 4789999999999999876 678887 477775 68999999
Q ss_pred EEeecccCcccccccccceeeecCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCCEEE
Q 013203 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLLV 202 (447)
Q Consensus 147 ~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~~-----------~~~le~i~~~~~~lvi 202 (447)
+|+++|.||||.++|+ +++||+|+++|++ |++++++ .++++++.+.|+||||
T Consensus 206 ~~dk~~~~p~~~~~p~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi 281 (515)
T 3iyg_H 206 AFKKTFSYAGFEMQPK----KYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVL 281 (515)
T ss_pred EEecCccCcccccCCc----cccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9999999999987666 7999999999984 6777776 5679999999999999
Q ss_pred EecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEE---e
Q 013203 203 VAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---T 279 (447)
Q Consensus 203 i~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i---~ 279 (447)
++++|++.++++|.. .+|++++ ++++++|+|||++|||+++++ ++++++++||+|+.|++ +
T Consensus 282 ~~~~I~dla~~~l~~------~gI~~v~-----~~~k~~leria~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig 345 (515)
T 3iyg_H 282 SKLPIGDVATQYFAD------RDMFCAG-----RVPEEDLKRTMMACGGSIQTS-----VNALSSDVLGRCQVFEETQIG 345 (515)
T ss_pred ECCcccHHHHHHHHH------cCCcccc-----cccHHHHHHHHHHhCCEEeec-----cccCCHHHCCcccEEEEEEEc
Confidence 999999989887753 3467776 467889999999999999996 89999999999999975 4
Q ss_pred cceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhc-
Q 013203 280 MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE- 358 (447)
Q Consensus 280 ~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~~~- 358 (447)
+++|+||+||+++ +.|||+|||+|+.+++|+||++|||||++|+++++
T Consensus 346 ~~~~~~i~g~~~~-------------------------------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~ 394 (515)
T 3iyg_H 346 GERYNFFTGCPKA-------------------------------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKND 394 (515)
T ss_pred CeEEEEEecCCCC-------------------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 7899999999876 36999999999999999999999999999999998
Q ss_pred CCcCChhHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHH--------------------Hhhh---cCCCCeeEeCCCCc
Q 013203 359 GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNAL--------------------KLLE---QDSSDLGYNPARGN 414 (447)
Q Consensus 359 gvVpGGGa~e~~~s~~L~~~~~~-~~~~~~~i~~~a~AL--------------------kl~~---~~~~~~G~d~~~~~ 414 (447)
++|||||++|+++|++|++|+.. ++++|+|+++|++|| ++++ +++.++|||+.+|+
T Consensus 395 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~ 474 (515)
T 3iyg_H 395 SVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTED 474 (515)
T ss_pred CeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCc
Confidence 69999999999999999999764 899999999999999 3432 24567899999999
Q ss_pred cccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 415 YVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 415 ~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
+.||++.|||||+.||+++|++|+++|++||+|
T Consensus 475 ~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 507 (515)
T 3iyg_H 475 IADNFEAFVWEPAMVRINALTAASEAACLIVSV 507 (515)
T ss_pred ccccHhccCEECHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999986
No 7
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=2.1e-82 Score=674.10 Aligned_cols=382 Identities=17% Similarity=0.225 Sum_probs=349.6
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||+++.++++ |+||+.|++||++|++.++++
T Consensus 61 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 134 (543)
T 3ruv_A 61 GVTILREMSVEHPAAKML------IEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQEL 134 (543)
T ss_dssp HHHHHHHSCCCCHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCcCHHHHHH------HHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccc-cc-----ceee--cCCcccceeEEEeeEE
Q 013203 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-DL-----ITIF--DRKALYNELNFVKGMK 147 (447)
Q Consensus 84 L~~~~~~v~--~~~~l~~va~ts~~~------~~~l~~li~~A~~~vg~~-~~-----I~v~--~g~~~~d~~~~~~G~~ 147 (447)
|+++++|++ +.++|.++|+||+++ +++|++++++|+.+++++ |. |+|+ .|+++. ++++++||+
T Consensus 135 L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~-ds~lv~G~v 213 (543)
T 3ruv_A 135 LKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASID-DTELIKGVL 213 (543)
T ss_dssp HHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGG-GCEEESSEE
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcc-cceeecceE
Confidence 999999987 788999999999864 789999999999999886 65 7776 677774 689999999
Q ss_pred EeecccCcccccccccceeeecCcEEEEeccc-------------cCCHHH-----------HHHHHHHHHhcCCCEEEE
Q 013203 148 LEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNV-----------IRQASLPCMMQGQSLLVV 203 (447)
Q Consensus 148 ~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~-----------~~~~le~i~~~~~~lvii 203 (447)
|+++|.||||+ .+++||+|+++|++ |+++++ +.++++++.++|+||||+
T Consensus 214 ~dk~~~~~~m~-------~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~ 286 (543)
T 3ruv_A 214 VDKERVSAQMP-------KKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFC 286 (543)
T ss_dssp ESCCCSCTTSC-------SEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred EeccccCcccc-------ccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 99999999984 37999999999984 566665 567789999999999999
Q ss_pred ecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEEe---c
Q 013203 204 AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---M 280 (447)
Q Consensus 204 ~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i~---~ 280 (447)
+++|+++++++|..+ +|++|++ +++++|+|||++|||+++++ ++++++++||+|+.|++. +
T Consensus 287 ~~~I~~~al~~L~~~------gI~~v~~-----v~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~ 350 (543)
T 3ruv_A 287 QKGIDDLAQHYLAKE------GIVAARR-----VKKSDMEKLAKATGANVIAA-----IAALSAQDLGDAGLVEERKISG 350 (543)
T ss_dssp SSCBCHHHHHHHHHT------TCEEECS-----CCHHHHHHHHHHHCCCEESC-----GGGCCGGGCEEEEEEEEEEETT
T ss_pred eCCccHHHHHHHHHc------CcEEEee-----CCHHHHHHHHHHhCCceecc-----cccCCHHHCCcccEEEEEEeCC
Confidence 999999999999853 5789985 56789999999999999996 899999999999999864 8
Q ss_pred ceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhcC-
Q 013203 281 DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG- 359 (447)
Q Consensus 281 ~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~~~g- 359 (447)
++|+||+||++++ .|||+|||+|+.+++|+||++|||||++|+++++|
T Consensus 351 ~~~~~i~g~~~~~-------------------------------~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~ 399 (543)
T 3ruv_A 351 DSMIFVEECKHPK-------------------------------AVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGR 399 (543)
T ss_dssp EEEEEEECCSSCS-------------------------------SEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred ceEEEEECCCCCc-------------------------------eeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8999999998874 48999999999999999999999999999999999
Q ss_pred CcCChhHHHHHHHHHHHHhcC-CCchhHHHHHHHHHHH--------------------Hhh--h--cCCCCeeEeCCCCc
Q 013203 360 IVPGSGVALLYASKELDKLQT-TNSDQKIGVQIVQNAL--------------------KLL--E--QDSSDLGYNPARGN 414 (447)
Q Consensus 360 vVpGGGa~e~~~s~~L~~~~~-~~~~~~~~i~~~a~AL--------------------kl~--~--~~~~~~G~d~~~~~ 414 (447)
+|||||++|+++|.+|++|+. .++++|+|+++|++|| +++ | .++.++|||+.+|+
T Consensus 400 iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~ 479 (543)
T 3ruv_A 400 IVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGA 479 (543)
T ss_dssp EEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCS
T ss_pred eecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCc
Confidence 999999999999999999986 4899999999999999 443 2 34568999999999
Q ss_pred cccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 415 YVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 415 ~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
+.||++.|||||+.||+++|++|+++|++||+|
T Consensus 480 ~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 512 (543)
T 3ruv_A 480 VEDMCENGVVEPLRVKTQAIQSAAESTEMLLRI 512 (543)
T ss_dssp EEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccHHHcCCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999999999997
No 8
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.8e-82 Score=674.95 Aligned_cols=382 Identities=19% Similarity=0.267 Sum_probs=349.3
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.++++
T Consensus 72 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 145 (553)
T 3ko1_A 72 GATILDKMDLQHPAAKLL------VQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQT 145 (553)
T ss_dssp HHHHHHSSCCCSHHHHHH------HHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhccChhHHHH------HHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccc--cc-------ceee--cCCcccceeEEEe
Q 013203 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--DL-------ITIF--DRKALYNELNFVK 144 (447)
Q Consensus 84 L~~~~~~v~--~~~~l~~va~ts~~~------~~~l~~li~~A~~~vg~~--~~-------I~v~--~g~~~~d~~~~~~ 144 (447)
|+++++|++ +.++|.++|+||+++ +++|++++++|+.+++++ |. |+|+ .|+++ +++++++
T Consensus 146 L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~-~ds~lv~ 224 (553)
T 3ko1_A 146 IQELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSI-NDTQLVY 224 (553)
T ss_dssp HHTTCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCG-GGCEEES
T ss_pred HHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCcc-ccceeeE
Confidence 999999987 788999999999875 689999999999999875 65 7776 57777 4689999
Q ss_pred eEEEeecccCcccccccccceeeecCcEEEEecc-------------ccCCHHH-----------HHHHHHHHHhcCCCE
Q 013203 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNV-----------IRQASLPCMMQGQSL 200 (447)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~-------------~i~~~~~-----------~~~~le~i~~~~~~l 200 (447)
||+|+++|.||||+ .+++||+|+++|+ +|+++++ +.++++++.++|+||
T Consensus 225 G~v~dk~~~~~~m~-------~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~v 297 (553)
T 3ko1_A 225 GIVVDKEVVHPGMP-------KRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANV 297 (553)
T ss_dssp EEEECSCBSCTTSC-------SCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred EEEecccccCCCCc-------cccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceE
Confidence 99999999999984 3789999999998 4677776 567789999999999
Q ss_pred EEEecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEEe-
Q 013203 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT- 279 (447)
Q Consensus 201 vii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i~- 279 (447)
||++++|+++++++|..+ +|++|++ +++++|+|||++|||+++++ ++++++++||+|+.|++.
T Consensus 298 vI~~~~I~~~al~~L~~~------gI~~v~~-----v~k~~leria~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ 361 (553)
T 3ko1_A 298 IICQKGIDEVAQSYLAKK------GVLAVRR-----AKKSDLEKLARATGGRVVSN-----IDEISEQDLGYASLIEERK 361 (553)
T ss_dssp EECSSCBCSHHHHHHHHH------TCEEECC-----CCHHHHHHHHTTTTCCEESC-----GGGCCSSSSEECSEEECCC
T ss_pred EEeccChHHHHHHHHHhc------chhhhhh-----hhhhhHHHHHHhhCCeeecc-----cccCChhhcchHHHHHHhh
Confidence 999999999999999853 4789885 56789999999999999996 899999999999999864
Q ss_pred --cceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHh
Q 013203 280 --MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (447)
Q Consensus 280 --~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~~ 357 (447)
+++|+||+||++++ .|||+|||+|+.+++|+||++|||||++|++++
T Consensus 362 ig~d~~~~i~g~~~~~-------------------------------~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~ 410 (553)
T 3ko1_A 362 VGEDKMVFVEGAKNPK-------------------------------SISILIRGGLERLVDETERALRDALGTVADVIK 410 (553)
T ss_dssp CSSSCCEEEESCSSSS-------------------------------CEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEeccCCCCc-------------------------------eEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 89999999998874 589999999999999999999999999999999
Q ss_pred cC-CcCChhHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHH--------------------Hhhh---cCC-CCeeEeCC
Q 013203 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNAL--------------------KLLE---QDS-SDLGYNPA 411 (447)
Q Consensus 358 ~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~~i~~~a~AL--------------------kl~~---~~~-~~~G~d~~ 411 (447)
+| +|||||++|+++|.+|++|+.. ++++|+|+++|++|| ++++ .++ .++|||+.
T Consensus 411 ~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~ 490 (553)
T 3ko1_A 411 DGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLY 490 (553)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETT
T ss_pred cCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEee
Confidence 99 9999999999999999999864 899999999999999 3432 233 67999999
Q ss_pred CCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 412 RGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 412 ~~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 491 ~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 526 (553)
T 3ko1_A 491 AGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRI 526 (553)
T ss_dssp TTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHE
T ss_pred cCCchHHHHhCccchhhhhhhhhhhcchhheEEEeh
Confidence 999999999999999999999999999999999986
No 9
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=4e-82 Score=668.20 Aligned_cols=381 Identities=15% Similarity=0.179 Sum_probs=347.0
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.++++
T Consensus 54 G~tIlk~i~v~hp~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 127 (513)
T 3iyg_B 54 GATILKNIGVDNPAAKVL------VDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQA 127 (513)
T ss_pred HHHHHHHccccCHHHHHH------HHHHHHhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-----CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccc---ccceee--cCCcccceeEEEeeEE
Q 013203 84 LDCQARKIT-----TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITIF--DRKALYNELNFVKGMK 147 (447)
Q Consensus 84 L~~~~~~v~-----~~~~l~~va~ts~~------~~~~l~~li~~A~~~vg~~---~~I~v~--~g~~~~d~~~~~~G~~ 147 (447)
|+++++|++ +.++|.++|+||.+ ++++|++++++|+.+++++ +.|+|+ .|++.. ++++++||+
T Consensus 128 L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~-ds~lv~G~v 206 (513)
T 3iyg_B 128 LLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLA-DSYLDEGFL 206 (513)
T ss_pred HHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCcc-ceeEEeeEE
Confidence 999999986 46789999987764 4678999999999999987 778886 477775 589999999
Q ss_pred EeecccCcccccccccceeeecCcEEEEecc--------------ccCCHHHHHH-----------HHHHHHhcCCCEEE
Q 013203 148 LEWGLKSPYFFTHKNKKECVLDGALVLIYDT--------------KISNSNVIRQ-----------ASLPCMMQGQSLLV 202 (447)
Q Consensus 148 ~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~--------------~i~~~~~~~~-----------~le~i~~~~~~lvi 202 (447)
|+++|.|| | +.+++||+|+++|+ ++++++++.+ +++++.++|+||||
T Consensus 207 ~dk~~~~~-m-------~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi 278 (513)
T 3iyg_B 207 LDKKIGVN-Q-------PKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFI 278 (513)
T ss_pred EeccccCC-C-------ceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999988 4 34799999999998 4667777654 68999999999999
Q ss_pred EecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEE---Ee
Q 013203 203 VAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---AT 279 (447)
Q Consensus 203 i~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~---i~ 279 (447)
++++|+++++++|.. .+|++||+|++ .+|+|||++|||+++++ ++++++++||+|+.|+ ++
T Consensus 279 ~~~~I~~~al~~L~~------~~I~av~~~~~-----~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig 342 (513)
T 3iyg_B 279 NRQLIYNYPEQLFGA------AGVMAIEHADF-----VGVERLALVTGGEIAST-----FDHPELVKLGSCKLIEEVMIG 342 (513)
T ss_pred EcCCccHHHHHHHHH------cCceEEecCCH-----HHHHHHHHHhCCEEecc-----cccCCHhHCCcccEEEEEEEC
Confidence 999999999998886 46899999875 45999999999999996 8999999999999997 78
Q ss_pred cceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhc-
Q 013203 280 MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE- 358 (447)
Q Consensus 280 ~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~~~- 358 (447)
++++++|.||+++ ++|||+|||+|+.+++|+||++|||||++|+++++
T Consensus 343 ~~~~~~~~g~~~~-------------------------------~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~ 391 (513)
T 3iyg_B 343 EDKLIHFSGVALG-------------------------------EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDS 391 (513)
T ss_pred CeEEEEEecCCCC-------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999764 57999999999999999999999999999999998
Q ss_pred CCcCChhHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHH--------------------Hhhh---cCCCCeeEeCCCCc
Q 013203 359 GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNAL--------------------KLLE---QDSSDLGYNPARGN 414 (447)
Q Consensus 359 gvVpGGGa~e~~~s~~L~~~~~~-~~~~~~~i~~~a~AL--------------------kl~~---~~~~~~G~d~~~~~ 414 (447)
++|||||++|+++|++|++|+.. ++++|+|+++|++|| ++++ +++.++|||+.+|+
T Consensus 392 ~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~ 471 (513)
T 3iyg_B 392 RTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGT 471 (513)
T ss_pred cEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCC
Confidence 69999999999999999999864 899999999999999 3432 35568999999999
Q ss_pred cccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 415 YVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 415 ~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
+.||++.|||||+.||+++|++|+++|++||+|
T Consensus 472 ~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 504 (513)
T 3iyg_B 472 IGDMSVLGITESFQVKRQVLLSAAEAAEVILRV 504 (513)
T ss_pred ccchHhccCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999986
No 10
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=2.2e-82 Score=668.30 Aligned_cols=382 Identities=16% Similarity=0.224 Sum_probs=319.9
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.++++
T Consensus 15 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 88 (500)
T 3aq1_B 15 GATILKEMDIQHPAAKMI------VEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCREI 88 (500)
T ss_dssp ----------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcCCCHHHHHH------HHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999999988 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccc--cc--------ceee--cCCcccceeEEE
Q 013203 84 LDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--DL--------ITIF--DRKALYNELNFV 143 (447)
Q Consensus 84 L~~~~~~v~--~~~~l~~va~ts~~------~~~~l~~li~~A~~~vg~~--~~--------I~v~--~g~~~~d~~~~~ 143 (447)
|+++++|++ +.++|.++|+||.+ +++.|++++++|+.+++++ |. |+|+ +|+++. +++++
T Consensus 89 L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~-ds~lv 167 (500)
T 3aq1_B 89 LETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSID-DSELI 167 (500)
T ss_dssp HHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGG-GCEEE
T ss_pred HHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCcc-ceEEE
Confidence 999999986 47899999997754 4788999999999999875 43 5776 798885 68999
Q ss_pred eeEEEeecccCcccccccccceeeecCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCC
Q 013203 144 KGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQS 199 (447)
Q Consensus 144 ~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~~-----------~~~le~i~~~~~~ 199 (447)
+||+|+++|.||||++ +++||+|+++|++ |++++++ .++++++.++|+|
T Consensus 168 ~G~v~dk~~~~~~m~~-------~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~ 240 (500)
T 3aq1_B 168 DGLVIDKERSHPNMPE-------KVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGAN 240 (500)
T ss_dssp SEEEESCCCSSTTSCS-------EEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTCCS
T ss_pred eeeEEeecCCCCCCcc-------cccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 9999999999999833 7899999999998 6667665 8999999999999
Q ss_pred EEEEecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEEe
Q 013203 200 LLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT 279 (447)
Q Consensus 200 lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i~ 279 (447)
|||++++|+++|+++|..|+ |++|+ ++++++|+|||++|||+++++ ++++++++||+|+.|++.
T Consensus 241 lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~ 304 (500)
T 3aq1_B 241 VVFCQKGIDDMAQYYIEKAG------IYAVR-----RVKKSDLKRLSKVTGATIIQD-----LDQITTEDVGTAGLVEEK 304 (500)
T ss_dssp EEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBSC-----TTCCCSTTCEEEEEEEEE
T ss_pred EEEECCCcCHHHHHHHHHCC------EEEEE-----eCCHHHHHHHHHHhCCeEecc-----cccCCHhHCCCceEEEEE
Confidence 99999999999999999864 78997 467889999999999999996 899999999999999864
Q ss_pred ---cceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHH
Q 013203 280 ---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAK 356 (447)
Q Consensus 280 ---~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~ 356 (447)
+++|+||+||+++ ++|||+|||+|+.+++|+||++|||+|++|+++
T Consensus 305 ~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~ 353 (500)
T 3aq1_B 305 EVRGGKMTYVTGCQNS-------------------------------KAVTVLLHGGTEHVVDSLDHALNDALHVVGVVI 353 (500)
T ss_dssp ECSSSEEEEEEEETTC-------------------------------CCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCeEEEEEECCCCC-------------------------------ceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999765 579999999999999999999999999999999
Q ss_pred hcC-CcCChhHHHHHHHHHHHHhcC-CCchhHHHHHHHHHHH--------------------Hhh--h-cCCCCeeEeCC
Q 013203 357 EEG-IVPGSGVALLYASKELDKLQT-TNSDQKIGVQIVQNAL--------------------KLL--E-QDSSDLGYNPA 411 (447)
Q Consensus 357 ~~g-vVpGGGa~e~~~s~~L~~~~~-~~~~~~~~i~~~a~AL--------------------kl~--~-~~~~~~G~d~~ 411 (447)
++| +|||||++|++++.+|++++. .++++|+++++|++|| +++ | .++.++|||+.
T Consensus 354 ~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~ 433 (500)
T 3aq1_B 354 EDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVY 433 (500)
T ss_dssp HHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTT
T ss_pred HCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCC
Confidence 999 999999999999999999986 4899999999999999 444 2 34568999999
Q ss_pred CCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 412 RGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 412 ~~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 434 ~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 469 (500)
T 3aq1_B 434 TGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRI 469 (500)
T ss_dssp TCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999997
No 11
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1e-82 Score=678.17 Aligned_cols=387 Identities=17% Similarity=0.250 Sum_probs=350.6
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|++.++++
T Consensus 66 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 139 (559)
T 3p9d_A 66 GATILSLLDVQHPAGKIL------VELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRF 139 (559)
T ss_dssp HHHHHHHHCCCSHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHH------HHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred Hhc-cccccCC--HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhcc-----ccc-----ceee--cCCcccceeEE
Q 013203 84 LDC-QARKITT--FEEIAQVGTTAANG------DGEIGELIAKVFEKGWE-----NDL-----ITIF--DRKALYNELNF 142 (447)
Q Consensus 84 L~~-~~~~v~~--~~~l~~va~ts~~~------~~~l~~li~~A~~~vg~-----~~~-----I~v~--~g~~~~d~~~~ 142 (447)
|++ +++|++. .++|.++|+||+++ +++|++++++|+.++++ ++. |+|+ +|+++. ++++
T Consensus 140 L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~-ds~l 218 (559)
T 3p9d_A 140 INEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSAT-ESLL 218 (559)
T ss_dssp HHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSS-CCBC
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCcc-ceeE
Confidence 999 9999874 67899999999985 68999999999999984 244 4444 388886 4899
Q ss_pred EeeEEEeecccCcccccccccceeeec--CcEEEEecccc-------------CCHHH-----------HHHHHHHHHhc
Q 013203 143 VKGMKLEWGLKSPYFFTHKNKKECVLD--GALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQ 196 (447)
Q Consensus 143 ~~G~~~~~g~~~p~~~~~~~~~~~~l~--~p~Il~~d~~i-------------~~~~~-----------~~~~le~i~~~ 196 (447)
++||+|+++|.||||++ +++ ||+|+++|++| +++++ +.++++++.++
T Consensus 219 v~G~v~dk~~~~~~m~~-------~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~ 291 (559)
T 3p9d_A 219 VPGYALNCTVASQAMPK-------RIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDA 291 (559)
T ss_dssp CSEECCCCCCSSTTSCS-------EECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eccEEEeecccCCCcce-------eeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999853 677 99999999886 34443 67889999999
Q ss_pred CCCEEEEecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCc-CCCCCCCceeeeE
Q 013203 197 GQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNS-TYFVPLKLGSCKR 275 (447)
Q Consensus 197 ~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~-~~~~~~~LG~a~~ 275 (447)
|+||||++++|+++|+++|..|+ |++|+ ++++++|+|||++|||+++++..++.+ +++++++||+|+.
T Consensus 292 g~~lvI~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~ 360 (559)
T 3p9d_A 292 GAQVVLTTKGIDDLCLKEFVEAK------IMGVR-----RCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDE 360 (559)
T ss_dssp CCSEEEESSCCCGGGTHHHHHTT------CEEES-----SCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEE
T ss_pred CCCEEEEcCCCCHHHHHHHHHcC------CceEc-----cCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceE
Confidence 99999999999999999999875 68887 467788999999999999999766655 8899999999999
Q ss_pred EE---EecceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHH
Q 013203 276 VI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAV 352 (447)
Q Consensus 276 v~---i~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~ 352 (447)
|+ +++++|+||.||+++ ++|||+|||+|+.+++|+||++|||||++
T Consensus 361 v~~~~ig~~~~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAL~~~ 409 (559)
T 3p9d_A 361 VVQAKFSDDECILIKGTSKH-------------------------------SSSSIILRGANDYSLDEMERSLHDSLSVV 409 (559)
T ss_dssp EEEEECSSCEEECEEEESSS-------------------------------CCCCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCceEEEEEcCCCC-------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 98 689999999999765 57999999999999999999999999999
Q ss_pred HHHHhcC-CcCChhHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHH--------------------Hhh--h-cCCC---
Q 013203 353 QAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNAL--------------------KLL--E-QDSS--- 404 (447)
Q Consensus 353 k~a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~~i~~~a~AL--------------------kl~--~-~~~~--- 404 (447)
|+++++| +|||||++|+++|.+|++++.. ++++|+|+++|++|| +|+ | .++.
T Consensus 410 r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~ 489 (559)
T 3p9d_A 410 KRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKP 489 (559)
T ss_dssp HHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC-
T ss_pred HHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccc
Confidence 9999999 9999999999999999999874 899999999999999 343 2 2333
Q ss_pred ---------CeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 405 ---------DLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 405 ---------~~G~d~~~~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
++|||+.+|++.||++.|||||+.||+++|++|+++|++||||
T Consensus 490 ~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 541 (559)
T 3p9d_A 490 EDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRI 541 (559)
T ss_dssp ---CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred cccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 6899999999999999999999999999999999999999986
No 12
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1.1e-81 Score=669.26 Aligned_cols=382 Identities=17% Similarity=0.253 Sum_probs=351.7
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.++++
T Consensus 65 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 138 (548)
T 1q3q_A 65 CATILDKIDLQHPAAKMM------VEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEI 138 (548)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccc--c-------cceee--cCCcccceeEEEe
Q 013203 84 LDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--D-------LITIF--DRKALYNELNFVK 144 (447)
Q Consensus 84 L~~~~~~v~--~~~~l~~va~ts~~------~~~~l~~li~~A~~~vg~~--~-------~I~v~--~g~~~~d~~~~~~ 144 (447)
|+++++|++ +.++|.++|+||.+ +++.|++++++|+.+++++ | .|+|+ +|+++. ++++++
T Consensus 139 L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~ 217 (548)
T 1q3q_A 139 LDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVE-ESELVR 217 (548)
T ss_dssp HHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGG-GCEEES
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCcc-ceEEEe
Confidence 999999986 47899999998764 3688999999999999875 4 68887 899986 579999
Q ss_pred eEEEeecccCcccccccccceeeecCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCCE
Q 013203 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSL 200 (447)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~~-----------~~~le~i~~~~~~l 200 (447)
||+|+++|.||||+ .+++||+|+++|++ |++++++ .++++++.++|+||
T Consensus 218 G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~l 290 (548)
T 1q3q_A 218 GVVIDKEVVHPRMP-------KRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANV 290 (548)
T ss_dssp SEEESCCCSSTTSC-------SEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred eEEEeccCCCCCCc-------ceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCE
Confidence 99999999999994 26899999999998 7778775 78999999999999
Q ss_pred EEEecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEE--
Q 013203 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-- 278 (447)
Q Consensus 201 vii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i-- 278 (447)
||++++|+++|+++|..|+ |++|+ ++++++|+|||++|||+++++ ++++++++||+|+.|++
T Consensus 291 vi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ 354 (548)
T 1q3q_A 291 VFVQKGIDDLAQHYLAKYG------IMAVR-----RVKKSDMEKLAKATGAKIVTN-----VKDLTPEDLGYAEVVEERK 354 (548)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBSS-----GGGCCGGGCEEESEEEEEE
T ss_pred EEEcCCcCHHHHHHHHHCC------cEEEc-----cCCHHHHHHHHHHhCCeEecc-----cccCCHHHCCCceEEEEEE
Confidence 9999999999999999864 78987 467889999999999999996 89999999999999986
Q ss_pred -ecceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHh
Q 013203 279 -TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (447)
Q Consensus 279 -~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~~ 357 (447)
++++|+||+||+++ ++|||+|||+|+.+++|+||++|||||++|++++
T Consensus 355 ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~ 403 (548)
T 1q3q_A 355 LAGENMIFVEGCKNP-------------------------------KAVTILIRGGTEHVIDEVERALEDAVKVVKDVME 403 (548)
T ss_dssp ETTEEEEEEECCSSC-------------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEecCCCC-------------------------------CeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999875 5699999999999999999999999999999999
Q ss_pred cC-CcCChhHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHH--------------------Hhh--h-cCCCCeeEeCCC
Q 013203 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNAL--------------------KLL--E-QDSSDLGYNPAR 412 (447)
Q Consensus 358 ~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~~i~~~a~AL--------------------kl~--~-~~~~~~G~d~~~ 412 (447)
+| +|||||++|++++.+|++|+.. ++++|+++++|++|| +++ | .++.++|||+.+
T Consensus 404 ~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 483 (548)
T 1q3q_A 404 DGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFE 483 (548)
T ss_dssp SCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTT
T ss_pred CCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCC
Confidence 99 9999999999999999999864 899999999999999 444 2 345689999999
Q ss_pred CccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 413 GNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 413 ~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 484 g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 518 (548)
T 1q3q_A 484 GKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRI 518 (548)
T ss_dssp TEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999997
No 13
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.4e-81 Score=668.01 Aligned_cols=381 Identities=19% Similarity=0.243 Sum_probs=350.9
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.++++
T Consensus 64 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 137 (545)
T 1a6d_A 64 GATILKEMDVEHPTAKMI------VEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKI 137 (545)
T ss_dssp HHHHHHHSCCCSHHHHHH------HGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccc---------ccceee--cCCcccceeEEEee
Q 013203 84 LDCQARKIT-TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---------DLITIF--DRKALYNELNFVKG 145 (447)
Q Consensus 84 L~~~~~~v~-~~~~l~~va~ts~~------~~~~l~~li~~A~~~vg~~---------~~I~v~--~g~~~~d~~~~~~G 145 (447)
|+++++| + +.++|.++|+||.+ +++.|++++++|+.+++++ +.|+|+ +|+++. ++++++|
T Consensus 138 L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~G 215 (545)
T 1a6d_A 138 IDEIAEK-STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVN-DTQFISG 215 (545)
T ss_dssp HHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCST-TCEEESE
T ss_pred HHHhcCC-CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCce-eeEEEee
Confidence 9999999 7 78899999998754 4688999999999999875 368887 898886 5799999
Q ss_pred EEEeecccCcccccccccceeeecCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCCEE
Q 013203 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLL 201 (447)
Q Consensus 146 ~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~~-----------~~~le~i~~~~~~lv 201 (447)
|+|+++|.||||+ .+++||+|+++|++ |++++++ .++++++.++|+|||
T Consensus 216 ~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lv 288 (545)
T 1a6d_A 216 IVIDKEKVHSKMP-------DVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVV 288 (545)
T ss_dssp EEESCCCSCTTSC-------SEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred EEEeccCCCCCCc-------ceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 9999999999994 26899999999998 6777775 789999999999999
Q ss_pred EEecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEE---
Q 013203 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA--- 278 (447)
Q Consensus 202 ii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i--- 278 (447)
|++++|+++|+++|..|+ |++|+ ++++++|+|||++|||+++++ ++++++++||+|+.|++
T Consensus 289 i~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~i 352 (545)
T 1a6d_A 289 LCQKGIDDVAQHYLAKEG------IYAVR-----RVKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEERKI 352 (545)
T ss_dssp EESSCBCHHHHHHHHHHT------CEEEC-----SCCHHHHHHHHHHHCCCEESS-----GGGCCGGGCEEEEEEEEEEE
T ss_pred EECCCccHHHHHHHHHCC------eeEec-----cCCHHHHHHHHHHhCCeeecc-----cccCCHHHCCCceEEEEEEe
Confidence 999999999999999874 78987 467889999999999999996 89999999999999986
Q ss_pred ecceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhc
Q 013203 279 TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (447)
Q Consensus 279 ~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~~~ 358 (447)
++++|+||+||+++ ++|||+|||+|+.+++|+||++|||||++|+++++
T Consensus 353 g~~~~~~~~g~~~~-------------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~ 401 (545)
T 1a6d_A 353 GDDRMTFVMGCKNP-------------------------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKED 401 (545)
T ss_dssp TTEEEEEEEEESCS-------------------------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEecCCCC-------------------------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 47899999999765 57999999999999999999999999999999999
Q ss_pred C-CcCChhHHHHHHHHHHHHhcC-CCchhHHHHHHHHHHH--------------------Hhh--h-cCCCCeeEeCCCC
Q 013203 359 G-IVPGSGVALLYASKELDKLQT-TNSDQKIGVQIVQNAL--------------------KLL--E-QDSSDLGYNPARG 413 (447)
Q Consensus 359 g-vVpGGGa~e~~~s~~L~~~~~-~~~~~~~~i~~~a~AL--------------------kl~--~-~~~~~~G~d~~~~ 413 (447)
| +|||||++|++++.+|++++. .++++|+++++|++|| +++ | .++.++|||+.+|
T Consensus 402 g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g 481 (545)
T 1a6d_A 402 GKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNN 481 (545)
T ss_dssp CEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTT
T ss_pred CCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccC
Confidence 9 999999999999999999986 4899999999999999 444 3 3456899999999
Q ss_pred ccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 414 NYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 414 ~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 482 ~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 515 (545)
T 1a6d_A 482 GVGDMKAKGVVDPLRVKTHALESAVEVATMILRI 515 (545)
T ss_dssp EEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccchhcCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999997
No 14
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.2e-81 Score=663.55 Aligned_cols=387 Identities=15% Similarity=0.172 Sum_probs=347.4
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 52 G~tIlk~i~v~hP~akll------~~~a~~qd~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (529)
T 3iyg_A 52 GATILKLLEVEHPAAKVL------CELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRY 125 (529)
T ss_pred HHHHHHHcccCChHHHHH------HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred Hhc-cccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhc---ccc-----c--ceee--cCCcccceeEE
Q 013203 84 LDC-QARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGW---END-----L--ITIF--DRKALYNELNF 142 (447)
Q Consensus 84 L~~-~~~~v~--~~~~l~~va~ts~~------~~~~l~~li~~A~~~vg---~~~-----~--I~v~--~g~~~~d~~~~ 142 (447)
|++ +++|++ +.++|.++|+||++ ++++|++++++|+.+++ ++| . |+|+ .|+++. ++++
T Consensus 126 L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~-ds~l 204 (529)
T 3iyg_A 126 ISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQM-ESML 204 (529)
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCcc-ceEE
Confidence 999 999987 67899999999875 36899999999999997 344 2 6664 688875 5899
Q ss_pred EeeEEEeecccCcccccccccceeeecCcEEEEecccc-------------CCHHH-----------HHHHHHHHHhcCC
Q 013203 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQGQ 198 (447)
Q Consensus 143 ~~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i-------------~~~~~-----------~~~~le~i~~~~~ 198 (447)
++||+|+++|.||||++ .++||+|+++|+++ +++++ +.++++++.++|+
T Consensus 205 v~G~v~dk~~~~~~m~~-------~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~ 277 (529)
T 3iyg_A 205 INGYALNCVVGSQGMPK-------RIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGA 277 (529)
T ss_pred EeeeEEecCcccccCCc-------ccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999854 68899999999864 33333 5678999999999
Q ss_pred CEEEEecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCC-cCCCCCCCceeeeEEE
Q 013203 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMN-STYFVPLKLGSCKRVI 277 (447)
Q Consensus 199 ~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~-~~~~~~~~LG~a~~v~ 277 (447)
||||++++|+++|+++|..|+ |++||+ +++++|+|||++|||+++++..++. .+++++++||+|+.|+
T Consensus 278 nvvi~~~~I~d~al~~L~~~g------I~av~~-----v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~ 346 (529)
T 3iyg_A 278 NVILTTGGIDDMCLKYFVEAG------AMAVRR-----VLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVV 346 (529)
T ss_pred CEEEECCCCCHHHHHHHHHcC------Cceecc-----CCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEE
Confidence 999999999999999999864 889985 6778899999999999999865554 3557789999999997
Q ss_pred ---EecceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHH
Q 013203 278 ---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQA 354 (447)
Q Consensus 278 ---i~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~ 354 (447)
+++++|+||+||+++ ++|||+|||+|+.+++|+||++|||||++|+
T Consensus 347 ~~~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~ 395 (529)
T 3iyg_A 347 QERICDDELILIKNTKAR-------------------------------TSASVILRGANDFMCDEMERSLHDALCVVKR 395 (529)
T ss_pred EEEeCCceEEEEEcCCCC-------------------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999876 4699999999999999999999999999999
Q ss_pred HHhcC-CcCChhHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHH--------------------Hhh--h-cCC------
Q 013203 355 AKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNAL--------------------KLL--E-QDS------ 403 (447)
Q Consensus 355 a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~~i~~~a~AL--------------------kl~--~-~~~------ 403 (447)
++++| +|||||++|+++|.+|++|+.. +|++|+|+++|++|| +|+ | +++
T Consensus 396 ~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~ 475 (529)
T 3iyg_A 396 VLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERK 475 (529)
T ss_pred HhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccc
Confidence 99998 9999999999999999999875 899999999999999 343 2 233
Q ss_pred --CCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 404 --SDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 404 --~~~G~d~~~~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
.++|||+.+|++.||++.|||||+.||+++|++|+++|++||||
T Consensus 476 ~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~i 521 (529)
T 3iyg_A 476 NLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRI 521 (529)
T ss_pred cCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 57999999999999999999999999999999999999999997
No 15
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=2.1e-81 Score=666.83 Aligned_cols=382 Identities=18% Similarity=0.249 Sum_probs=350.8
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.++++
T Consensus 63 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 136 (543)
T 1a6d_B 63 GVTILKEMDVEHPAAKMM------VEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRV 136 (543)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC--HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccc--cc-------ceee--cCCcccceeEEEe
Q 013203 84 LDCQARKITT--FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--DL-------ITIF--DRKALYNELNFVK 144 (447)
Q Consensus 84 L~~~~~~v~~--~~~l~~va~ts~~------~~~~l~~li~~A~~~vg~~--~~-------I~v~--~g~~~~d~~~~~~ 144 (447)
|++++.|++. .++|.++|+||.+ +++.|++++++|+.+++++ |. |+|+ +|+++. ++++++
T Consensus 137 L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~ 215 (543)
T 1a6d_B 137 IDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAID-DTQLIN 215 (543)
T ss_dssp HHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGG-GCEEES
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCcc-ceeEEc
Confidence 9999999874 6889999997754 3688999999999999876 53 7887 899986 579999
Q ss_pred eEEEeecccCcccccccccceeeecCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCCE
Q 013203 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSL 200 (447)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~~-----------~~~le~i~~~~~~l 200 (447)
||+|+++|.||||+ .+++||+|+++|++ |++++++ .++++++.++|+||
T Consensus 216 G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~l 288 (543)
T 1a6d_B 216 GIIVDKEKVHPGMP-------DVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANV 288 (543)
T ss_dssp EEEESCCCSSTTSC-------SEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred cEEEecCCCCCCCc-------ceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 99999999999984 26899999999998 7777775 78999999999999
Q ss_pred EEEecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEE--
Q 013203 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-- 278 (447)
Q Consensus 201 vii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i-- 278 (447)
||++++|+++|+++|..|+ |++|+ ++++++|+|||++|||+++++ ++++++++||+|+.|++
T Consensus 289 vi~~~~I~~~al~~L~~~~------I~av~-----~v~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ 352 (543)
T 1a6d_B 289 VITQKGIDDMAQHYLSRAG------IYAVR-----RVKKSDMDKLAKATGASIVST-----IDEISSSDLGTAERVEQVK 352 (543)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHTCCEESC-----GGGCCGGGCEEEEEEEEEE
T ss_pred EEECCCcCHHHHHHHHHCC------eeEec-----cCCHHHHHHHHHHhCCceecc-----cccCCHHHCCCceEEEEEE
Confidence 9999999999999999864 88997 467889999999999999996 89999999999999986
Q ss_pred -ecceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHh
Q 013203 279 -TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (447)
Q Consensus 279 -~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~~ 357 (447)
++++|+||+||+++ ++|||+|||+|+.+++|+||++|||||++|++++
T Consensus 353 ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~ 401 (543)
T 1a6d_B 353 VGEDYMTFVTGCKNP-------------------------------KAVSILVRGETEHVVDEMERSITDSLHVVASALE 401 (543)
T ss_dssp ETTEEEEEEEEESSS-------------------------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEecCCCC-------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999875 5699999999999999999999999999999999
Q ss_pred cC-CcCChhHHHHHHHHHHHHhcC-CCchhHHHHHHHHHHH--------------------Hhh--h-cCCCCeeEeCCC
Q 013203 358 EG-IVPGSGVALLYASKELDKLQT-TNSDQKIGVQIVQNAL--------------------KLL--E-QDSSDLGYNPAR 412 (447)
Q Consensus 358 ~g-vVpGGGa~e~~~s~~L~~~~~-~~~~~~~~i~~~a~AL--------------------kl~--~-~~~~~~G~d~~~ 412 (447)
+| +|||||++|++++.+|++++. .++++|+|+++|++|| +++ | .++.++|||+.+
T Consensus 402 ~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 481 (543)
T 1a6d_B 402 DGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFT 481 (543)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTT
T ss_pred CCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCC
Confidence 99 999999999999999999986 5899999999999999 444 2 345689999999
Q ss_pred CccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 413 GNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 413 ~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 482 g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 516 (543)
T 1a6d_B 482 GEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRI 516 (543)
T ss_dssp TEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHE
T ss_pred CcccchhhcCceecHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999986
No 16
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=4.4e-82 Score=669.52 Aligned_cols=386 Identities=15% Similarity=0.128 Sum_probs=347.7
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||+++.++++ |+||+.|++||++|++.++++
T Consensus 61 G~tIlk~i~v~hP~akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 134 (528)
T 3p9d_D 61 GHTILKQMAILHPVARML------VEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDI 134 (528)
T ss_dssp HHHHHHHSCCCCTTHHHH------HHHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHH
Confidence 469999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhcc--cccceee-------cCCcccceeEEEeeE
Q 013203 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWE--NDLITIF-------DRKALYNELNFVKGM 146 (447)
Q Consensus 84 L~~~~~~v~--~~~~l~~va~ts~~~------~~~l~~li~~A~~~vg~--~~~I~v~-------~g~~~~d~~~~~~G~ 146 (447)
|+++++|++ +.++|.++|+||+++ +++|++++++|+.++++ +|.|+++ +|+++. ++++++||
T Consensus 135 L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~-ds~lv~G~ 213 (528)
T 3p9d_D 135 LLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTID-DTEMIDGV 213 (528)
T ss_dssp HHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSC-CCEEESSC
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCcc-ceEEEeee
Confidence 999999997 788999999999975 58899999999999986 4554443 388886 58999999
Q ss_pred EEeecccCcccccccccceeeecCcEEEEeccccC-------------CHH-----------HHHHHHHHHHhcCCCEEE
Q 013203 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPCMMQGQSLLV 202 (447)
Q Consensus 147 ~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~-------------~~~-----------~~~~~le~i~~~~~~lvi 202 (447)
+|+++|.|||| |+.+++||+|+++|++|+ +++ ++.++++++.+.|+||||
T Consensus 214 v~dk~~~~~~~------m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi 287 (528)
T 3p9d_D 214 VLTQTAIKSAG------GPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLL 287 (528)
T ss_dssp BCCCCCCCSSS------CCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEeecccCccc------CcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999995 344899999999999865 444 367899999999999999
Q ss_pred EecCc-----chhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEE
Q 013203 203 VAEDV-----ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI 277 (447)
Q Consensus 203 i~~~i-----~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~ 277 (447)
++++| +++++++|..| +|++||+ .++++|+|||++|||+++++ ++++++++||+|+.|+
T Consensus 288 ~~~~I~~~a~~~~al~~L~~~------~I~av~~-----~~k~~le~ia~~tGa~ii~~-----~~~l~~~~LG~a~~v~ 351 (528)
T 3p9d_D 288 IQKSILRDAVNDLALHFLSKL------NIMVVKD-----IEREEIEFLSKGLGCKPIAD-----IELFTEDRLDSADLVE 351 (528)
T ss_dssp ESSCSCTTSCSCHHHHHHTTT------SCCEEEC-----CCTHHHHHHHHHHTCCCCSC-----STTCCSSSEEEESCEE
T ss_pred EeCCcccccCCHHHHHHHHHc------CcEEEEe-----CCHHHHHHHHHHHCCEEecc-----cccCCHHHCCcccEEE
Confidence 99999 99999988865 4889995 45678999999999999997 7899999999999997
Q ss_pred ---EecceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHH
Q 013203 278 ---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQA 354 (447)
Q Consensus 278 ---i~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~ 354 (447)
++++++++|.+|..+. .+++|||+|||+|+.+++|+||++|||||++|+
T Consensus 352 ~~~ig~~~~~~i~g~~~~~----------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~ 403 (528)
T 3p9d_D 352 EIDSDGSKIVRVTGIRNNN----------------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRC 403 (528)
T ss_dssp CCEETTEECCBCTTBCCGG----------------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHH
T ss_pred EEEECCEEEEEEEcccccC----------------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4577899999987321 146899999999999999999999999999999
Q ss_pred HHhcC-CcCChhHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHH--------------------Hhhh---cCCCCeeEe
Q 013203 355 AKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNAL--------------------KLLE---QDSSDLGYN 409 (447)
Q Consensus 355 a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~~i~~~a~AL--------------------kl~~---~~~~~~G~d 409 (447)
++++| +|||||++|+++|.+|++++.. ++++|+|+++|++|| ++++ +++.++|||
T Consensus 404 av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d 483 (528)
T 3p9d_D 404 LVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGIS 483 (528)
T ss_dssp HHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCC
T ss_pred HHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCcccee
Confidence 99998 9999999999999999999874 899999999999999 3332 245689999
Q ss_pred CCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 410 PARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 410 ~~~~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 484 ~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 521 (528)
T 3p9d_D 484 VRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRI 521 (528)
T ss_dssp SSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999987
No 17
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.1e-80 Score=657.89 Aligned_cols=389 Identities=16% Similarity=0.174 Sum_probs=343.4
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|++.++++
T Consensus 52 G~tIlk~i~~~hP~Akll------~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (515)
T 3iyg_E 52 GATILSMMDVDHQIAKLM------VELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEH 125 (515)
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC----HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccc-------ccceee--cCCcccceeEEEe
Q 013203 84 LDCQARKITT----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNFVK 144 (447)
Q Consensus 84 L~~~~~~v~~----~~~l~~va~ts~~~------~~~l~~li~~A~~~vg~~-------~~I~v~--~g~~~~d~~~~~~ 144 (447)
|+++++|++. .++|.++|++|+++ .+.|++++++|+..+.+. +.|+|+ +|+++. ++++++
T Consensus 126 L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~-ds~lv~ 204 (515)
T 3iyg_E 126 LDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLE-DTKLIK 204 (515)
T ss_pred HHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcc-cceEEe
Confidence 9999998853 58899999999975 457889999999988642 246665 588886 589999
Q ss_pred eEEEeecccCccccccccc-ceeeecCcEEEE-----eccccCCHHHH-----------HHHHHHHHhcCCCEEEEecCc
Q 013203 145 GMKLEWGLKSPYFFTHKNK-KECVLDGALVLI-----YDTKISNSNVI-----------RQASLPCMMQGQSLLVVAEDV 207 (447)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~-~~~~l~~p~Il~-----~d~~i~~~~~~-----------~~~le~i~~~~~~lvii~~~i 207 (447)
||+|+++|.||||+++.++ +...+++|+.+. ++.+|++++++ .++++++.++|+||||++++|
T Consensus 205 G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I 284 (515)
T 3iyg_E 205 GVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGF 284 (515)
T ss_pred eEEEecccccccccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 9999999999999875543 333445554433 23347777775 678999999999999999999
Q ss_pred chhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEE-----ecce
Q 013203 208 ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-----TMDN 282 (447)
Q Consensus 208 ~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i-----~~~~ 282 (447)
+++|+++|..|+ |.+++++ ++++|+|||++|||+++++ ++++++++||+|++|++ ++++
T Consensus 285 ~~~al~~L~~~~------I~~v~~v-----~k~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~k~~ 348 (515)
T 3iyg_E 285 DDEANHLLLQND------LPAVRWV-----GGPEIELIAIATGGRIVPR-----FSELTAEKLGFAGLVKEISFGTTKDK 348 (515)
T ss_pred CHHHHHHHHHCC------CEEEecc-----CHHHHHHHHHHhCCEEecc-----cccCCHHHCCcceEEEEEEeccccce
Confidence 999999999875 6788865 4678999999999999996 89999999999999986 4489
Q ss_pred EEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhcC-Cc
Q 013203 283 VVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IV 361 (447)
Q Consensus 283 ~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~~~g-vV 361 (447)
++||+||+++. .|||+|||+|+.+++|+||++|||||++|+++++| +|
T Consensus 349 ~~~~~g~~~~~-------------------------------~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iV 397 (515)
T 3iyg_E 349 MLVIEQCKNSR-------------------------------AVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 397 (515)
T ss_pred EEEEEcCCCCc-------------------------------eEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 99999998764 58999999999999999999999999999999999 99
Q ss_pred CChhHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHH--------------------Hhhh----cCCCCeeEeCCCCccc
Q 013203 362 PGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNAL--------------------KLLE----QDSSDLGYNPARGNYV 416 (447)
Q Consensus 362 pGGGa~e~~~s~~L~~~~~~-~~~~~~~i~~~a~AL--------------------kl~~----~~~~~~G~d~~~~~~~ 416 (447)
||||++|+++|.+|++|+.. ++++|+|+++|++|| ++++ .++.++|||+.+|++.
T Consensus 398 pGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~ 477 (515)
T 3iyg_E 398 YGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTN 477 (515)
T ss_pred CCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCccc
Confidence 99999999999999999875 899999999999999 3432 2456899999999999
Q ss_pred cccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 417 DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 417 dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
||++.|||||+.||+++|++|+++|++||+|
T Consensus 478 d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 508 (515)
T 3iyg_E 478 DMKHQHVIETLIGKKQQISLATQMVRMILKI 508 (515)
T ss_pred chHhccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999986
No 18
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.3e-81 Score=659.25 Aligned_cols=382 Identities=16% Similarity=0.176 Sum_probs=340.6
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 53 G~tIlk~i~v~hP~akll------~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 126 (518)
T 3iyg_D 53 GATILKQMQVLHPAARML------VELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEI 126 (518)
T ss_pred HHHHHHHcccchHHHHHH------HHHHHHhhhhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCCC------hhHHHHHHHHHHhhcc---ccc-----ceee--cCCcccceeEEEee
Q 013203 84 LDCQARKIT--TFEEIAQVGTTAANGD------GEIGELIAKVFEKGWE---NDL-----ITIF--DRKALYNELNFVKG 145 (447)
Q Consensus 84 L~~~~~~v~--~~~~l~~va~ts~~~~------~~l~~li~~A~~~vg~---~~~-----I~v~--~g~~~~d~~~~~~G 145 (447)
|++++.|++ +.++|.++|+||++++ ++|++++++|+.++++ +|. |+|+ .|++.. ++++++|
T Consensus 127 L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~-ds~lv~G 205 (518)
T 3iyg_D 127 LTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTID-DCELVEG 205 (518)
T ss_pred HHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChh-hheEecc
Confidence 999999997 7789999999999864 7899999999999985 554 6665 577774 6899999
Q ss_pred EEEeecccCcccccccccceeeecCcEEEEeccc-------------cCCHH-----------HHHHHHHHHHhcCCCEE
Q 013203 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSN-----------VIRQASLPCMMQGQSLL 201 (447)
Q Consensus 146 ~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~-----------~~~~~le~i~~~~~~lv 201 (447)
|+|+++|.| .|+ + .++||+|++++++ +++++ ++.++++++.++|+|||
T Consensus 206 ~~~dk~~~~-~mp---~----~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lv 277 (518)
T 3iyg_D 206 LVLTQKVAN-SGI---T----RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVL 277 (518)
T ss_pred EEEeccccc-CCC---c----cccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 999999998 331 1 3556666666554 45554 46788999999999999
Q ss_pred EE-----ecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEE
Q 013203 202 VV-----AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRV 276 (447)
Q Consensus 202 ii-----~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v 276 (447)
|+ +++|+++|+++|..| +|++||+|++ .+|+|||++|||+++++ ++++++++||+|+.|
T Consensus 278 i~~k~i~~~~I~~~Al~~L~~~------~I~av~~~~~-----~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v 341 (518)
T 3iyg_D 278 LIQKSILRDALSDLALHFLNKM------KIMVVKDIER-----EDIEFICKTIGTKPVAH-----VDQFTADMLGSAELA 341 (518)
T ss_pred EEeccccccCcCHHHHHHHHHc------CcEEEecCCH-----HHHHHHHHHhCCEEecc-----cccCCHHHCCcCcEE
Confidence 99 899999999999975 5899999864 45999999999999997 899999999999999
Q ss_pred EE---ec-ceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHH
Q 013203 277 IA---TM-DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAV 352 (447)
Q Consensus 277 ~i---~~-~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~ 352 (447)
++ ++ +++++|+||++ ++++|||+|||+|+.+++|+||++|||||++
T Consensus 342 ~~~~~g~~~~~~~~~g~~~------------------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~ 391 (518)
T 3iyg_D 342 EEVSLNGSGKLIKITGCAS------------------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVI 391 (518)
T ss_pred EEEEeCCCceEEEEECCCC------------------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 75 45 68899999875 1367999999999999999999999999999
Q ss_pred HHHHhcC-CcCChhHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHH--------------------Hhhh---cCCCCee
Q 013203 353 QAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNAL--------------------KLLE---QDSSDLG 407 (447)
Q Consensus 353 k~a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~~i~~~a~AL--------------------kl~~---~~~~~~G 407 (447)
|+++++| +|||||++|+++|.+|++|+.. ++++|+|+++|++|| ++++ +++.++|
T Consensus 392 r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G 471 (518)
T 3iyg_D 392 RCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTG 471 (518)
T ss_pred HHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCcee
Confidence 9999998 9999999999999999999874 899999999999999 3432 3566899
Q ss_pred EeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 408 YNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 408 ~d~~~~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 472 ~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 511 (518)
T 3iyg_D 472 INVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKI 511 (518)
T ss_pred EeCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999997
No 19
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.4e-80 Score=652.13 Aligned_cols=388 Identities=14% Similarity=0.176 Sum_probs=341.2
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|++.++++
T Consensus 53 G~tIlk~i~v~hP~Akll------~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~ 126 (512)
T 3iyg_Q 53 AATILRELEVQHPAAKMI------VMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEI 126 (512)
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred Hhcc----ccccCCHHHHHHHHHHhcCC-----ChhHHHHHHHHHHhhccc-ccceee-------cCCcccceeEEEeeE
Q 013203 84 LDCQ----ARKITTFEEIAQVGTTAANG-----DGEIGELIAKVFEKGWEN-DLITIF-------DRKALYNELNFVKGM 146 (447)
Q Consensus 84 L~~~----~~~v~~~~~l~~va~ts~~~-----~~~l~~li~~A~~~vg~~-~~I~v~-------~g~~~~d~~~~~~G~ 146 (447)
|+++ +.++++.++|.++|+||+++ +++|++++++|+.+++++ +.|+++ .|+++ +++++++||
T Consensus 127 L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~-~ds~lv~G~ 205 (512)
T 3iyg_Q 127 LPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGV-HSSSVLHGM 205 (512)
T ss_pred HHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCc-ccceEEeeE
Confidence 9998 56777889999999999986 788999999999999876 455543 48888 579999999
Q ss_pred EEeecccCccccccccc-ceeeecCcE-EEEeccc----cCCHHHHHHH-------HH----HHHhcCCCEEEEecCcch
Q 013203 147 KLEWGLKSPYFFTHKNK-KECVLDGAL-VLIYDTK----ISNSNVIRQA-------SL----PCMMQGQSLLVVAEDVEN 209 (447)
Q Consensus 147 ~~~~g~~~p~~~~~~~~-~~~~l~~p~-Il~~d~~----i~~~~~~~~~-------le----~i~~~~~~lvii~~~i~~ 209 (447)
+|+++|.| |+++.++ +...+++|+ +..++.+ |++++++.++ ++ ++.++|+||||++++|++
T Consensus 206 ~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~ 283 (512)
T 3iyg_Q 206 VFKKETEG--DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVAD 283 (512)
T ss_pred EEecCcCC--CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccH
Confidence 99999976 6654432 222345554 5555555 7788888776 55 888999999999999999
Q ss_pred hHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEE---ecceEEEE
Q 013203 210 EVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVII 286 (447)
Q Consensus 210 ~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i---~~~~~~~i 286 (447)
.++++|.. .+|++||+|+++ +|+|||++|||+++++ ++++++++||+|++|++ +++++++|
T Consensus 284 la~~~l~k------~~I~av~~~~~~-----dle~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~~g~~~~~~~ 347 (512)
T 3iyg_Q 284 MALHYANK------YNIMLVRLNSKW-----DLRRLCKTVGATALPR-----LNPPVLEEMGHCDSVYLSEVGDTQVVVF 347 (512)
T ss_pred HHHHHHHH------CCeEEEEeCCHH-----HHHHHHHHhCCEEecc-----cccCCHHHCCcccEEEEEEeCCeEEEEE
Confidence 99997764 469999998754 4999999999999996 89999999999999975 46689999
Q ss_pred eCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhcC-CcCChh
Q 013203 287 GGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSG 365 (447)
Q Consensus 287 ~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~~~g-vVpGGG 365 (447)
.+|+. +|++|||+|||+|+.+++|+||++|||||++|+++++| +|||||
T Consensus 348 ~~~~~------------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGG 397 (512)
T 3iyg_Q 348 KHEKE------------------------------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGG 397 (512)
T ss_pred EcccC------------------------------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCc
Confidence 99853 24789999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHHhcC-CCchhHHHHHHHHHHH--------------------Hhhh---cCCCCeeEeCCCC--cccccc
Q 013203 366 VALLYASKELDKLQT-TNSDQKIGVQIVQNAL--------------------KLLE---QDSSDLGYNPARG--NYVDMF 419 (447)
Q Consensus 366 a~e~~~s~~L~~~~~-~~~~~~~~i~~~a~AL--------------------kl~~---~~~~~~G~d~~~~--~~~dm~ 419 (447)
++|+++|.+|++|+. .++++|+|+++|++|| ++++ +++.++|||+.+| ++.||+
T Consensus 398 a~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~ 477 (512)
T 3iyg_Q 398 ATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDML 477 (512)
T ss_pred HHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchH
Confidence 999999999999986 4899999999999999 4432 3567899999965 999999
Q ss_pred ccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 420 KCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 420 ~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
+.|||||+.||+++|++|+++|++||+|
T Consensus 478 ~~gI~dp~~vk~~al~~A~~~a~~iL~i 505 (512)
T 3iyg_Q 478 EAGVLDTYLGKYWAIKLATNAAVTVLRV 505 (512)
T ss_pred hccCeEcHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999986
No 20
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-79 Score=648.77 Aligned_cols=382 Identities=12% Similarity=0.149 Sum_probs=342.0
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.++++
T Consensus 51 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 124 (515)
T 3iyg_G 51 GNAILREIQVQHPAAKSM------IEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMIST 124 (515)
T ss_pred HHHHHHhcccCCHHHHHH------HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccc--c--------cceee--cCCcccceeEEE
Q 013203 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--D--------LITIF--DRKALYNELNFV 143 (447)
Q Consensus 84 L~~~~~~v~--~~~~l~~va~ts~~~------~~~l~~li~~A~~~vg~~--~--------~I~v~--~g~~~~d~~~~~ 143 (447)
|++++.|++ +.+.|.++|+||+++ .+.+++++++|+..+.++ + .|+|+ +|+++. +++++
T Consensus 125 L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~-ds~lv 203 (515)
T 3iyg_G 125 LKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIE-DSCVL 203 (515)
T ss_pred HHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcc-cceEE
Confidence 999999986 368899999999874 345678999999988632 2 15554 688885 68999
Q ss_pred eeEEEeecccCcccccccccceeeecCcEEEEecc-------------ccCCHHHHHHHHH-----------HHHhcCCC
Q 013203 144 KGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNVIRQASL-----------PCMMQGQS 199 (447)
Q Consensus 144 ~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~-------------~i~~~~~~~~~le-----------~i~~~~~~ 199 (447)
+||+|+++|.||+|+ .+++||+|+++|+ +|++++++.++++ ++.+.|++
T Consensus 204 ~G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~ 276 (515)
T 3iyg_G 204 RGVMINKDVTHPRMR-------RYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPD 276 (515)
T ss_pred eeEEEeCCCCCCCCc-------ceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999773 4799999999998 5778888888877 89999988
Q ss_pred EEEEecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCcee-eeEEEE
Q 013203 200 LLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVIA 278 (447)
Q Consensus 200 lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~-a~~v~i 278 (447)
+||++++|++.++++|.. .+|++++ ++++++|+|||++|||+++++ ++++++++||+ |+.|++
T Consensus 277 vIi~~~~I~~~al~~L~~------~~I~av~-----~~~k~~leria~~tGa~ii~~-----l~~l~~~~LG~~a~~v~~ 340 (515)
T 3iyg_G 277 VVITEKGISDLAQHYLMR------ANITAIR-----RVRKTDNNRIARACGARIVSR-----PEELREEDVGTGAGLLEI 340 (515)
T ss_pred EEEECCccCHHHHHHHHH------CCceeec-----cCCHHHHHHHHHHhCCeeecc-----ccccChhhcCCcccEEEE
Confidence 999999999999998885 3578876 567889999999999999996 89999999999 999975
Q ss_pred ---ecceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHH
Q 013203 279 ---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAA 355 (447)
Q Consensus 279 ---~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a 355 (447)
++++|+||+||+++. .|||+|||+|+.+++|+||++|||||++|++
T Consensus 341 ~~~g~~~~~~i~g~~~~~-------------------------------~~TIllrG~t~~~l~E~er~i~Dal~~~r~~ 389 (515)
T 3iyg_G 341 KKIGDEYFTFITECKDPK-------------------------------ACTILLRGASKEILSEVERNLQDAMQVCRNV 389 (515)
T ss_pred EEECCceEEEEeCCCCCC-------------------------------eEEEEEcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999998863 5999999999999999999999999999999
Q ss_pred Hhc-CCcCChhHHHHHHHHHHHHhcC-CCchhHHHHHHHHHHH--------------------Hhh--hc--CCCCeeEe
Q 013203 356 KEE-GIVPGSGVALLYASKELDKLQT-TNSDQKIGVQIVQNAL--------------------KLL--EQ--DSSDLGYN 409 (447)
Q Consensus 356 ~~~-gvVpGGGa~e~~~s~~L~~~~~-~~~~~~~~i~~~a~AL--------------------kl~--~~--~~~~~G~d 409 (447)
+++ ++|||||++|+++|++|++|+. .+|++|+|+++|++|| +|+ |. ++.++|||
T Consensus 390 ~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d 469 (515)
T 3iyg_G 390 LLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVN 469 (515)
T ss_pred hhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeee
Confidence 976 6999999999999999999976 4999999999999999 343 21 24579999
Q ss_pred CCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 410 PARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 410 ~~~~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 470 ~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~i 507 (515)
T 3iyg_G 470 GETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRI 507 (515)
T ss_pred CCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999986
No 21
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=2e-81 Score=666.96 Aligned_cols=384 Identities=15% Similarity=0.145 Sum_probs=343.7
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.++++
T Consensus 66 G~TIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~ 139 (550)
T 3p9d_G 66 GATILKLLDVVHPAAKTL------VDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEK 139 (550)
T ss_dssp HHHHTTTSCCCSHHHHHH------HHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--C---HHHHHHHHHHhcC------CChhHHHHHHHHHHhhcc-c------ccceeecCCcccceeEEEee
Q 013203 84 LDCQARKIT--T---FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWE-N------DLITIFDRKALYNELNFVKG 145 (447)
Q Consensus 84 L~~~~~~v~--~---~~~l~~va~ts~~------~~~~l~~li~~A~~~vg~-~------~~I~v~~g~~~~d~~~~~~G 145 (447)
|+++++|++ + .++|.++|+||++ ++++|++++++|+.+|++ + +.+++ +|+++.| +++++|
T Consensus 140 L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~d-s~lv~G 217 (550)
T 3p9d_G 140 INELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEE-SLFING 217 (550)
T ss_dssp HHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGG-CCCCSS
T ss_pred HHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccc-eeEEee
Confidence 999999986 3 5689999998864 368899999999999984 3 34444 4888876 599999
Q ss_pred EEEeecccCcccccccccceeeecCcEEEEeccc-------------cCCHHHHHH-----------HHHHHHhcCCCEE
Q 013203 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVIRQ-----------ASLPCMMQGQSLL 201 (447)
Q Consensus 146 ~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~~~~-----------~le~i~~~~~~lv 201 (447)
|+|+++|.||||.+.|+ .++||+|+++|++ |++++++.+ +++++.++|++||
T Consensus 218 ~~~dk~~~s~yf~~~~~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vV 293 (550)
T 3p9d_G 218 VAFKKTFSYAGFEQQPK----KFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIV 293 (550)
T ss_dssp EEECCCSSCTTCSCSCS----CCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEE
T ss_pred EEEeccccccccccCcc----cccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999988766 4999999999997 456666554 6788999999999
Q ss_pred EEecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEE---
Q 013203 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA--- 278 (447)
Q Consensus 202 ii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i--- 278 (447)
|++++|++.++++|.. .+|+++++ +++++|+|||++|||+++++ ++++++++||+|+.|++
T Consensus 294 i~~~~I~dla~~~L~~------~gI~~v~~-----v~k~~lerIa~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~i 357 (550)
T 3p9d_G 294 LSKLPIGDLATQFFAD------RNIFCAGR-----VSADDMNRVIQAVGGSIQST-----TSDIKPEHLGTCALFEEMQI 357 (550)
T ss_dssp EESSCCCHHHHHTTGG------GTCEEEEC-----CCTTHHHHHHHHTCCCCBSS-----GGGCCGGGCCCCSBCCCCCC
T ss_pred EECCCccHHHHHHHHH------cCCccccC-----cCHHHHHHHHHHhCCceecc-----hhhCCHHHcCCceEEEEEEe
Confidence 9999999999986663 35788875 56788999999999999996 89999999999999975
Q ss_pred ecceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhc
Q 013203 279 TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (447)
Q Consensus 279 ~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~~~ 358 (447)
+++++++|.||+++ ++|||+|||+|+.+++|+||++|||||++|+++++
T Consensus 358 g~e~~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~ 406 (550)
T 3p9d_G 358 GSERYNLFQGCPQA-------------------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQN 406 (550)
T ss_dssp SSSCCEEEBCCTTC-------------------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCeEEEEEecCCCC-------------------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhc
Confidence 78899999999865 46999999999999999999999999999999999
Q ss_pred C-CcCChhHHHHHHHHHHHHhcC-CCchhHHHHHHHHHHH--------------------Hhhh---cCCCCeeEeCCCC
Q 013203 359 G-IVPGSGVALLYASKELDKLQT-TNSDQKIGVQIVQNAL--------------------KLLE---QDSSDLGYNPARG 413 (447)
Q Consensus 359 g-vVpGGGa~e~~~s~~L~~~~~-~~~~~~~~i~~~a~AL--------------------kl~~---~~~~~~G~d~~~~ 413 (447)
| +|||||++|+++|.+|++|+. .++++|+|+++|++|| +|++ .+++++|||+.+|
T Consensus 407 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g 486 (550)
T 3p9d_G 407 KLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETE 486 (550)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSS
T ss_pred CCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCC
Confidence 9 999999999999999999876 4899999999999999 3432 4566899999999
Q ss_pred ccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 414 NYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 414 ~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 487 ~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 520 (550)
T 3p9d_G 487 NIGDNFAKFVWEPALVKINALNSATEATNLILSV 520 (550)
T ss_dssp SBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred cccchHhccCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999986
No 22
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=4.9e-80 Score=657.87 Aligned_cols=388 Identities=19% Similarity=0.199 Sum_probs=341.7
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 87 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 160 (562)
T 3p9d_E 87 GATILSQMELDNEIAKLL------VQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISK 160 (562)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCCH------HHHHHHHHHhcCC------ChhHHHHHHHHHHhhccc-------ccceee--cCCcccceeEE
Q 013203 84 LDCQARKITTF------EEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNF 142 (447)
Q Consensus 84 L~~~~~~v~~~------~~l~~va~ts~~~------~~~l~~li~~A~~~vg~~-------~~I~v~--~g~~~~d~~~~ 142 (447)
|+++++|+++. +.|.++|+||+++ .+.|++++++|+..+.+. +.|+|+ .|+++.| +++
T Consensus 161 L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~d-s~l 239 (562)
T 3p9d_E 161 LEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISD-SKL 239 (562)
T ss_dssp TTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGG-CEE
T ss_pred HHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhh-hce
Confidence 99999988632 6899999999974 457999999999988652 346665 5888865 799
Q ss_pred EeeEEEeecccCcccccccccceeeecCcEEEEeccc-------------cCCHHH-----------HHHHHHHHHhcCC
Q 013203 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNV-----------IRQASLPCMMQGQ 198 (447)
Q Consensus 143 ~~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~-----------~~~~le~i~~~~~ 198 (447)
++||+|+++|.||||+++.+ .+..+++|+|++++++ |+++++ +.++++++.++|+
T Consensus 240 veGmv~dk~~~sp~m~~~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~ 318 (562)
T 3p9d_E 240 INGVILDKDFSHPQMPKCVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGA 318 (562)
T ss_dssp ESSEEESSCCCTTSCCC------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred eeeEEEecCCCCCCcCcccc-cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999987541 0112356676666543 556655 6789999999999
Q ss_pred CEEEEecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEE
Q 013203 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA 278 (447)
Q Consensus 199 ~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i 278 (447)
||||++++|+++|+++|..|+ |.+++++ ++++|+|||++|||+++++ ++++++++||+|+.|++
T Consensus 319 ~vvI~~~~I~~~Al~~L~~~~------I~~v~~v-----~k~~le~ia~~TGa~iis~-----l~~l~~~~LG~a~~v~~ 382 (562)
T 3p9d_E 319 DVVICQWGFDDEANHLLLQND------LPAVRWV-----GGQELEHIAISTNGRIVPR-----FQDLSKDKLGTCSRIYE 382 (562)
T ss_dssp SCCEECSSCCSHHHHHHHTTT------CCCEECC-----CTTTHHHHHHHHCCCEEES-----SSCCCTTSCEECSCEEE
T ss_pred cEEEEeCCCCHHHHHHHHHCC------CEEEecc-----CHHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEE
Confidence 999999999999999999875 5678875 4567999999999999996 89999999999999987
Q ss_pred -----ecceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHH
Q 013203 279 -----TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQ 353 (447)
Q Consensus 279 -----~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k 353 (447)
++++++||+||++++ .|||+|||+|+.+++|+||++|||||++|
T Consensus 383 ~~ig~~~~~~~~i~g~~~~~-------------------------------~~TIllrG~te~~l~E~kr~i~DAL~~~r 431 (562)
T 3p9d_E 383 QEFGTTKDRMLIIEQSKETK-------------------------------TVTCFVRGSNKMIVDEAERALHDSLCVVR 431 (562)
T ss_dssp ECCSSSSCCEEEECCCSCCS-------------------------------CCEEEEECTTTTTHHHHTHHHHHHHHHHH
T ss_pred EEeccCCceEEEEecCCCCC-------------------------------eEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 368999999998763 58999999999999999999999999999
Q ss_pred HHHhcC-CcCChhHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHH--------------------Hhhh----cCCCCee
Q 013203 354 AAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNAL--------------------KLLE----QDSSDLG 407 (447)
Q Consensus 354 ~a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~~i~~~a~AL--------------------kl~~----~~~~~~G 407 (447)
+++++| +|||||++|+++|++|++++.. ++++|+|+++|++|| ++++ .++.++|
T Consensus 432 ~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G 511 (562)
T 3p9d_E 432 NLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIG 511 (562)
T ss_dssp HHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBC
T ss_pred HHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCcee
Confidence 999999 9999999999999999999764 899999999999999 4432 2456899
Q ss_pred EeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 408 YNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 408 ~d~~~~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 512 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 551 (562)
T 3p9d_E 512 VDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKI 551 (562)
T ss_dssp CBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred EecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999986
No 23
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=5.9e-81 Score=661.61 Aligned_cols=381 Identities=18% Similarity=0.199 Sum_probs=345.4
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC--CCChHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG--RANLTGLTQGFRMAADAVVR 82 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~--G~~P~~I~~G~~~A~~~~~~ 82 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.+++
T Consensus 60 G~tIlk~i~~~hP~Akll------~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~ 133 (527)
T 3p9d_B 60 GATILKSIPLDNPAAKVL------VNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALD 133 (527)
T ss_dssp HHHHHHTCCCCCHHHHHH------HHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCHHHHHH------HHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999996 99999999999999999999
Q ss_pred HHhccccccCC-----HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhcccc---cceee--cCCcccceeEEEeeE
Q 013203 83 NLDCQARKITT-----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND---LITIF--DRKALYNELNFVKGM 146 (447)
Q Consensus 83 ~L~~~~~~v~~-----~~~l~~va~ts~~~------~~~l~~li~~A~~~vg~~~---~I~v~--~g~~~~d~~~~~~G~ 146 (447)
+|+++++|+++ .++|.++|+||+++ ++.|++++++|+.+|++++ .|+|+ .|+++. ++++++||
T Consensus 134 ~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~-ds~lv~G~ 212 (527)
T 3p9d_B 134 ALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLS-DSFLDEGF 212 (527)
T ss_dssp HHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSS-CCCEESSC
T ss_pred HHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcc-ccEEEEeE
Confidence 99999999985 68899999999986 6789999999999999887 78887 477775 58999999
Q ss_pred EEeecccCcccccccccceeeecCcEEEEeccc--------------cCCHHHH-----------HHHHHHHHhcCCCEE
Q 013203 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK--------------ISNSNVI-----------RQASLPCMMQGQSLL 201 (447)
Q Consensus 147 ~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~--------------i~~~~~~-----------~~~le~i~~~~~~lv 201 (447)
+|+++|.||| |+ .++||+|++++++ +++++++ +++++++.++|+|||
T Consensus 213 ~~dk~~~~~~----p~----~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vv 284 (527)
T 3p9d_B 213 ILAKKFGNNQ----PK----RIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTF 284 (527)
T ss_dssp CCSCCCSSSC----CS----CCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEE
T ss_pred EEecccCCCC----Ce----eeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 9999999997 33 4689999998764 3455554 578999999999999
Q ss_pred EEecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEE---E
Q 013203 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---A 278 (447)
Q Consensus 202 ii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~---i 278 (447)
|++++|++.++++|..|+ |++|++|++ .+|+|||++|||+++++ ++++++++||+|+.|+ +
T Consensus 285 i~~~~I~~~al~~L~~~~------i~av~~~~~-----~dle~ia~~tGa~iv~~-----~~~~~~~~LG~a~~v~~~~i 348 (527)
T 3p9d_B 285 INRQLIYDYPEQLFTDLG------INSIEHADF-----EGVERLALVTGGEVVST-----FDEPSKCKLGECDVIEEIML 348 (527)
T ss_dssp ESSCCCTTTHHHHHHHTC------BCCCCCCHH-----HHHHHHHHHTCCCCCST-----TSCCTTSCEECSBCCBCCCS
T ss_pred EECCCCCHHHHHHHHHCC------CEEEecCCH-----HHHHHHHHHhCCEEecc-----hhhCCHHHCCCCcEEEEEEe
Confidence 999999999999999864 889998754 45999999999999997 7999999999999997 6
Q ss_pred ecceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhc
Q 013203 279 TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (447)
Q Consensus 279 ~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~~k~a~~~ 358 (447)
+++++++|.||+++ ++|||+|||+|+.+++|+||++|||||++|+++++
T Consensus 349 g~~~~~~~~g~~~~-------------------------------~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~ 397 (527)
T 3p9d_B 349 GEQPFLKFSGCKAG-------------------------------EACTIVLRGATDQTLDEAERSLHDALSVLSQTTKE 397 (527)
T ss_dssp SSCCBCCBCSSCCS-------------------------------CCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHC
T ss_pred cceEEEEEECCCCC-------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78999999999765 57999999999999999999999999999999999
Q ss_pred C-CcCChhHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHH--------------------Hhhh---cCCCCeeEeCCCC
Q 013203 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNAL--------------------KLLE---QDSSDLGYNPARG 413 (447)
Q Consensus 359 g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~~i~~~a~AL--------------------kl~~---~~~~~~G~d~~~~ 413 (447)
| +|||||++|+++|.+|++++.. ++++|+|+++|++|| ++++ .++.++|||+.+|
T Consensus 398 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g 477 (527)
T 3p9d_B 398 TRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNG 477 (527)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSST
T ss_pred CCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCC
Confidence 9 9999999999999999999764 899999999999999 4432 3567899999999
Q ss_pred ccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 414 NYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 414 ~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 478 ~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 511 (527)
T 3p9d_B 478 TIADMRQLGIVESYKLKRAVVSSASEAAEVLLRV 511 (527)
T ss_dssp TCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHC
T ss_pred CCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999986
No 24
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.7e-79 Score=644.26 Aligned_cols=381 Identities=17% Similarity=0.229 Sum_probs=334.4
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|++.||+||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.++++
T Consensus 52 G~tIlk~i~v~hp~akll------~~~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (517)
T 3iyg_Z 52 GNVLLHEMQIQHPTASLI------AKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQF 125 (517)
T ss_pred HHHHHHHccCcCHHHHHH------HHHHHHHHHHhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhcccc------cceee--cCCcccceeEEEeeEEE
Q 013203 84 LDCQARKIT-TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND------LITIF--DRKALYNELNFVKGMKL 148 (447)
Q Consensus 84 L~~~~~~v~-~~~~l~~va~ts~~~------~~~l~~li~~A~~~vg~~~------~I~v~--~g~~~~d~~~~~~G~~~ 148 (447)
|++++.|++ +.+.|.++|+||+++ .+.|++++++|+..+.+++ .|+|. +|++. +++++++||+|
T Consensus 126 L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~-~ds~lv~G~v~ 204 (517)
T 3iyg_Z 126 LEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSE-TDTSLIRGLVL 204 (517)
T ss_pred HHhhCcCCCCCHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCc-cccceEeeEEE
Confidence 999999987 788999999999874 4578888899988875432 24443 57776 46899999999
Q ss_pred eecccCcccccccccceeeecCcEEEEecccc-------------CCHHHHH-----------HHHHHHHhc--------
Q 013203 149 EWGLKSPYFFTHKNKKECVLDGALVLIYDTKI-------------SNSNVIR-----------QASLPCMMQ-------- 196 (447)
Q Consensus 149 ~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i-------------~~~~~~~-----------~~le~i~~~-------- 196 (447)
+++|.||||+ .+++||+|+++|++| ++++++. ..++++...
T Consensus 205 dk~~~~p~m~-------~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~ 277 (517)
T 3iyg_Z 205 DHGARHPDMK-------KRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDS 277 (517)
T ss_pred eccCCCCCcc-------ccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 9999999973 479999999999875 3343332 344444433
Q ss_pred CCCEEEE-ecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCC-ceeee
Q 013203 197 GQSLLVV-AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLK-LGSCK 274 (447)
Q Consensus 197 ~~~lvii-~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~-LG~a~ 274 (447)
++|+||+ +++|++.++++|..+ +|++|++. ++++|+|||++|||+++++ ++++++++ ||+|+
T Consensus 278 ~~~lvIi~~~~I~d~al~~L~~~------gI~~v~~v-----~~~~leria~~tGa~iv~~-----l~~l~~~~~LG~a~ 341 (517)
T 3iyg_Z 278 DKGFVVINQKGIDPFSLDALAKE------GIIALRRA-----KRRNMERLTLACGGIALNS-----LDDLNPDCLLGHAG 341 (517)
T ss_pred CCceEEEecccCCHHHHHHHHHC------CCEEEEec-----CHHHHHHHHHHhCCEEecc-----hhhCcccccCCcce
Confidence 4566666 589999999999874 47899864 5678999999999999996 89999999 99999
Q ss_pred EE---EEecceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHH
Q 013203 275 RV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHA 351 (447)
Q Consensus 275 ~v---~i~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~~ 351 (447)
| .+++++++||+||++++ .|||+|||+|+.+++|+||++|||||+
T Consensus 342 -v~e~~ig~~~~~~~~g~~~~~-------------------------------~~TI~lrG~t~~~l~E~kr~l~DAl~~ 389 (517)
T 3iyg_Z 342 -VYEYTLGEEKFTFIEKCNNPR-------------------------------SVTLLIKGPNKHTLTQIKDAIRDGLRA 389 (517)
T ss_pred -EEEEEEcCceEEEEeCCCCch-------------------------------hheeeecCCcHHHHHHHHHHHHHHHHH
Confidence 9 57899999999998875 379999999999999999999999999
Q ss_pred HHHHHhcC-CcCChhHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHH--------------------Hhhh---cCCCCe
Q 013203 352 VQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNAL--------------------KLLE---QDSSDL 406 (447)
Q Consensus 352 ~k~a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~~i~~~a~AL--------------------kl~~---~~~~~~ 406 (447)
+|+++++| +|||||++|+++|++|++|+.. ++++|+|+++|++|| ++++ .++.++
T Consensus 390 ~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~ 469 (517)
T 3iyg_Z 390 VKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLV 469 (517)
T ss_pred HHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcE
Confidence 99999999 9999999999999999999874 899999999999999 3332 356689
Q ss_pred eEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 407 GYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 407 G~d~~~~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 470 G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 510 (517)
T 3iyg_Z 470 GVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLV 510 (517)
T ss_pred EEeCCCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999986
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.3e-78 Score=645.67 Aligned_cols=382 Identities=17% Similarity=0.220 Sum_probs=331.3
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 59 G~tIlk~i~v~hP~akll------~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 132 (546)
T 3p9d_F 59 GKVLLTEMQIQSPTAVLI------ARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKF 132 (546)
T ss_dssp HHHHHHTSCCCCHHHHHH------HHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCcCHHHHHH------HHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC----CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccc-c------cceee--cCCcccceeEEEe
Q 013203 84 LDCQARKIT----TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-D------LITIF--DRKALYNELNFVK 144 (447)
Q Consensus 84 L~~~~~~v~----~~~~l~~va~ts~~~------~~~l~~li~~A~~~vg~~-~------~I~v~--~g~~~~d~~~~~~ 144 (447)
|++++.|++ +.+.|.++|+||+++ .+.|++++++|+..+.+. + .|++. +|++.. ++++++
T Consensus 133 L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~-ds~lv~ 211 (546)
T 3p9d_F 133 LDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPK-DTTFIK 211 (546)
T ss_dssp HHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTT-TCCCCS
T ss_pred HHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcc-ccEEEe
Confidence 999999884 678999999999974 467899999999988631 1 34554 577764 689999
Q ss_pred eEEEeecccCcccccccccceeeecCcEEEEeccccC-------------CHHH-----------HHHHHHHHHh-----
Q 013203 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNV-----------IRQASLPCMM----- 195 (447)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~-------------~~~~-----------~~~~le~i~~----- 195 (447)
||+|+++|.||+|+ .+++||+|+++|++++ ++++ +...++++..
T Consensus 212 G~v~dk~~~~~~m~-------~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v 284 (546)
T 3p9d_F 212 GLVLDHGGRHPDMP-------TRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEV 284 (546)
T ss_dssp SCEESCCCCSSSSC-------SSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred eEEEecccccccCc-------ceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999763 4799999999997653 2221 2234555544
Q ss_pred ----cCCCEEEE-ecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCc
Q 013203 196 ----QGQSLLVV-AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKL 270 (447)
Q Consensus 196 ----~~~~lvii-~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~L 270 (447)
+|+|+||+ +++|+++|+++|..|+ |+++|+. ++.+|+|||++|||+++++ ++++++++|
T Consensus 285 ~~~~~g~~~vIi~~k~I~~~Al~~L~~~g------I~~vr~v-----~~~~leria~~tGa~ii~~-----l~~l~~~~L 348 (546)
T 3p9d_F 285 CGMDPDKGFVIINQKGIDPMSLDVFAKHN------ILALRRA-----KRRNMERLQLVTGGEAQNS-----VEDLSPQIL 348 (546)
T ss_dssp --------CEEEESSCCCHHHHHHHTTTT------CEEECCC-----CHHHHHHHHHTTTBCCCCC-----CSSCSTTCC
T ss_pred hhhccCCceEEEecCcCcHHHHHHHHHCC------CeeEecC-----CHHHHHHHHHHhCCEEecc-----hhhCCHhHC
Confidence 45775555 5699999999999764 7899864 5678999999999999996 899999999
Q ss_pred eeeeEE---EEecceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHH
Q 013203 271 GSCKRV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITN 347 (447)
Q Consensus 271 G~a~~v---~i~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~D 347 (447)
|+|+.| .+++++|+||+||++++ .|||+|||+|+.+++|+||++||
T Consensus 349 G~a~~v~~~~ig~~~~~~i~g~~~~~-------------------------------~~tI~lrG~te~~l~E~kr~l~D 397 (546)
T 3p9d_F 349 GFSGLVYQETIGEEKFTYVTENTDPK-------------------------------SCTILIKGSTHYALAQTKDAVRD 397 (546)
T ss_dssp BCCCCBCBCCCSSCCCEECSSCSCCS-------------------------------CEEEECCCSCHHHHHHHHHHHHH
T ss_pred CcccEEEEEEecCceEEEEecCCCCc-------------------------------eEEEEECCCCHHHHHHHHHHHHH
Confidence 999999 47899999999998874 59999999999999999999999
Q ss_pred HHHHHHHHHhcC-CcCChhHHHHHHHHHHHH---hcC-CCchhHHHHHHHHHHH--------------------Hhhh--
Q 013203 348 ALHAVQAAKEEG-IVPGSGVALLYASKELDK---LQT-TNSDQKIGVQIVQNAL--------------------KLLE-- 400 (447)
Q Consensus 348 Al~~~k~a~~~g-vVpGGGa~e~~~s~~L~~---~~~-~~~~~~~~i~~~a~AL--------------------kl~~-- 400 (447)
|||++|+++++| +|||||++|+++|.+|++ |+. .++++|+|+++|++|| ++++
T Consensus 398 Al~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h 477 (546)
T 3p9d_F 398 GLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDEL 477 (546)
T ss_dssp HHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH
T ss_pred HHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 999999999998 999999999999999998 565 4899999999999999 4442
Q ss_pred c------CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 401 Q------DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 401 ~------~~~~~G~d~~~~~~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
. ++.++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 478 ~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 530 (546)
T 3p9d_F 478 DDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLC 530 (546)
T ss_dssp HHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred hhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 2 4567999999999999999999999999999999999999999986
No 26
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=3.9e-78 Score=643.99 Aligned_cols=382 Identities=15% Similarity=0.138 Sum_probs=337.8
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCcchhHHhhhHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHHH
Q 013203 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (447)
Q Consensus 5 ~~~il~~~~~~~p~a~~~~~~~~~~~~s~~qd~evGDGTTt~vvLa~~Ll~~~~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (447)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.++++
T Consensus 68 G~TIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~ 141 (568)
T 3p9d_H 68 AATMLRELDIVHPAVKVL------VMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKE 141 (568)
T ss_dssp HHHHTTTCCCCCHHHHHH------HHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred Hhcccccc----CCHHHHHHHHHHhcC-----CChhHHHHHHHHHHhhccc-----c-------cceee--cCCccccee
Q 013203 84 LDCQARKI----TTFEEIAQVGTTAAN-----GDGEIGELIAKVFEKGWEN-----D-------LITIF--DRKALYNEL 140 (447)
Q Consensus 84 L~~~~~~v----~~~~~l~~va~ts~~-----~~~~l~~li~~A~~~vg~~-----~-------~I~v~--~g~~~~d~~ 140 (447)
|++++.++ .+.++|.++|+||++ ++++|++++++|+.+++++ + .|+|+ +|+++.| +
T Consensus 142 L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~d-S 220 (568)
T 3p9d_H 142 LDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSN-S 220 (568)
T ss_dssp HHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGG-C
T ss_pred HHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcch-h
Confidence 99999876 567899999999874 3588999999999999874 3 47776 4988864 7
Q ss_pred EEEeeEEEeecccCcccccccccceeeec---CcEEEEeccc-------------cCCHHHHHH-----------HHHHH
Q 013203 141 NFVKGMKLEWGLKSPYFFTHKNKKECVLD---GALVLIYDTK-------------ISNSNVIRQ-----------ASLPC 193 (447)
Q Consensus 141 ~~~~G~~~~~g~~~p~~~~~~~~~~~~l~---~p~Il~~d~~-------------i~~~~~~~~-----------~le~i 193 (447)
++++|++|+++|. +| +.+++ ||+|+++|++ |++++++.+ +++++
T Consensus 221 ~lv~G~v~dk~~~--~m-------~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I 291 (568)
T 3p9d_H 221 TVIKGMVFNREPE--GH-------VKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEI 291 (568)
T ss_dssp EEESSCCBSSCBS--SG-------GGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccEEEeeccc--CC-------cEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999974 33 34677 9999999987 667777655 78889
Q ss_pred HhcCCCEEEEecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceee
Q 013203 194 MMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSC 273 (447)
Q Consensus 194 ~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a 273 (447)
.+.|+||||++++|++.++++|..+ +|++||+|+ +.+|+|||++|||+++++ ++++++++||+|
T Consensus 292 ~~~g~~vvi~~~~I~~~al~~L~~~------gI~av~~v~-----~~~leria~~tGa~ivs~-----l~~l~~~~LG~a 355 (568)
T 3p9d_H 292 ADMGVECIVAGAGVGELALHYLNRY------GILVLKVPS-----KFELRRLCRVCGATPLPR-----LGAPTPEELGLV 355 (568)
T ss_dssp HHTTCCEEEECSCCCHHHHHHHHHH------TCEEECCCC-----HHHHHHHHHHHSCCCCSS-----SSCCCGGGCEEC
T ss_pred HhcCCeEEEECCCcChHHHHHHHHC------CeEEEecCC-----HHHHHHHHHHhCCEEEec-----cccCCHHHCCcc
Confidence 9999999999999999999999875 489999875 456999999999999997 899999999999
Q ss_pred eEEE---EecceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHH
Q 013203 274 KRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALH 350 (447)
Q Consensus 274 ~~v~---i~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~~l~E~er~i~DAl~ 350 (447)
+.|+ +++++++||++|+. |++++|||+|||+|+.+++|+||++|||||
T Consensus 356 ~~v~~~~ig~~~~~~~~g~~~-----------------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~ 406 (568)
T 3p9d_H 356 ETVKTMEIGGDRVTVFKQEQG-----------------------------EISRTSTIILRGATQNNLDDIERAIDDGVA 406 (568)
T ss_dssp SCCCCCEETTEECBCCCCCSS-----------------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCceEEEEecCCC-----------------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHH
Confidence 9986 45689999999863 134679999999999999999999999999
Q ss_pred HHHHHHh--c-CCcCChhHHHHHHHHHHHHhcC-CCchhHHHHHHHHHHH--------------------Hhhh---c--
Q 013203 351 AVQAAKE--E-GIVPGSGVALLYASKELDKLQT-TNSDQKIGVQIVQNAL--------------------KLLE---Q-- 401 (447)
Q Consensus 351 ~~k~a~~--~-gvVpGGGa~e~~~s~~L~~~~~-~~~~~~~~i~~~a~AL--------------------kl~~---~-- 401 (447)
++|++++ + ++|||||++|+++|.+|++|+. .+|++|+|+++|++|| +|++ .
T Consensus 407 vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~ 486 (568)
T 3p9d_H 407 AVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTE 486 (568)
T ss_dssp HHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSS
T ss_pred HHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhc
Confidence 9999999 5 6999999999999999999976 4899999999999999 4442 1
Q ss_pred ------CCCCeeEeCCCCc---cccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013203 402 ------DSSDLGYNPARGN---YVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 447 (447)
Q Consensus 402 ------~~~~~G~d~~~~~---~~dm~~~gI~Dp~~v~~~al~~A~~~A~~iL~i 447 (447)
++.++|||+.+|+ +.||++.|||||+.||+++|++|+++|++||||
T Consensus 487 ~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 541 (568)
T 3p9d_H 487 PGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSI 541 (568)
T ss_dssp CCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC---
T ss_pred ccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 3457999999997 999999999999999999999999999999987
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.9e-50 Score=363.27 Aligned_cols=189 Identities=38% Similarity=0.559 Sum_probs=185.4
Q ss_pred eEEEeeEEEeecccCcccccccccceeeecCcEEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhHHHHHHHhc
Q 013203 140 LNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDF 219 (447)
Q Consensus 140 ~~~~~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~ 219 (447)
+++++||.||+||+||||++++++|.++++||+||++|.||+++++++|+||++.++|+||+|+++||+++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEeCCCChhhHHHHH
Q 013203 220 TCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERC 299 (447)
Q Consensus 220 ~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~i~g~~~~~~i~~r~ 299 (447)
++|.+++||||+|+||++|++.|+|||.+|||++++++.|+++++++.++||+|++|.+++|.|++++|.+++++|+.|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccc----HHHHHHHhhhcCCeEEE
Q 013203 300 EQLRSTIKLSTS----DKLKDRLAKLSGGYAVL 328 (447)
Q Consensus 300 ~~l~~~~~~~~~----~~l~eR~a~l~g~~atI 328 (447)
++|++++++++| |+|+||||+|+||+|.|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999988 99999999999999865
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=1.2e-48 Score=353.35 Aligned_cols=185 Identities=35% Similarity=0.527 Sum_probs=181.2
Q ss_pred EeeEEEeecccCcccccccccceeeecCcEEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhHHHHHHHhccCC
Q 013203 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCT 222 (447)
Q Consensus 143 ~~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~ 222 (447)
.+||.||+||+||||++++++|.++++||+||++|.||+++++++|+||.+.++|+||+|+++||+.+||++|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEeCCCChhhHHHHHHHH
Q 013203 223 TEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQL 302 (447)
Q Consensus 223 ~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~i~g~~~~~~i~~r~~~l 302 (447)
.++|||||+|+||++|++.|+|||.+|||++++++.|+++++++.++||+|++|.+++|.|+++.|.+++++|+.|+++|
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccc----HHHHHHHhhhcCCeEE
Q 013203 303 RSTIKLSTS----DKLKDRLAKLSGGYAV 327 (447)
Q Consensus 303 ~~~~~~~~~----~~l~eR~a~l~g~~at 327 (447)
++++++++| |+|+||||+|+||+|+
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 999999988 9999999999999874
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=3.2e-39 Score=278.53 Aligned_cols=144 Identities=34% Similarity=0.535 Sum_probs=142.1
Q ss_pred eEEEeecccCcccccccccceeeecCcEEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhHHHHHHHhccCCCC
Q 013203 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTE 224 (447)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~ 224 (447)
||.||+||+||||++++++|.++++||+||++|.||+++++++|+||++.++|+||+|+++||+.+||++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEeC
Q 013203 225 KVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGG 288 (447)
Q Consensus 225 ~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~i~g 288 (447)
+++|||+|+||++|++.|+|||.+|||++++++.|.++++++.++||+|++|.+++|+|++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999976
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.89 E-value=2.9e-23 Score=189.74 Aligned_cols=144 Identities=10% Similarity=0.156 Sum_probs=119.7
Q ss_pred eeEEEeeEEEeecccCcccccccccceeeecCcEEEEeccccC-------------CHH-----------HHHHHHHHHH
Q 013203 139 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPCM 194 (447)
Q Consensus 139 ~~~~~~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~-------------~~~-----------~~~~~le~i~ 194 (447)
+|++++|++|++++.+|.|+ ..++||+|++++++++ +++ .+.+++++|.
T Consensus 3 dS~lv~Gvvl~k~~~~~~mp-------k~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~ 75 (178)
T 1gml_A 3 DSCVLRGVMINKDVTHPRMR-------RYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDII 75 (178)
T ss_dssp CCSEEEEEEESCCCSSTTSC-------CEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEEeccccCCCCC-------cccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57899999999999988763 3689999999998653 222 2456788899
Q ss_pred hcCCCEEEEecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCcee-e
Q 013203 195 MQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-C 273 (447)
Q Consensus 195 ~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~-a 273 (447)
+.|+++|+++++|++.|+++|..+ +|++|++ +++++|+|||++|||+++++ ++++++++||+ |
T Consensus 76 ~~g~nVVl~~k~I~d~a~~~l~k~------gI~~vr~-----v~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~ 139 (178)
T 1gml_A 76 QLKPDVVITEKGISDLAQHYLMRA------NVTAIRR-----VRKTDNNRIARACGARIVSR-----PEELREDDVGTGA 139 (178)
T ss_dssp TTCCSEEEESSCBCHHHHHHHHHT------TCEEECC-----CCHHHHHHHHHHHCCCEESC-----GGGCCGGGSBCCE
T ss_pred hcCCcEEEECCcccHHHHHHHHHC------CCEEEec-----CCHHHHHHHHHHhCCeEeCC-----hhhCChhhhCCcc
Confidence 999999999999999999988874 5899986 45678999999999999997 89999999999 9
Q ss_pred eEEE---EecceEEEEeCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHH
Q 013203 274 KRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKA 336 (447)
Q Consensus 274 ~~v~---i~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~l~eR~a~l~g~~atI~v~G~t~~ 336 (447)
+.|+ +++++++||+||++++ .|||+|||+|..
T Consensus 140 ~~v~~~~ig~~~~~~~~gc~~~~-------------------------------~~TIllRG~~~~ 174 (178)
T 1gml_A 140 GLLEIKKIGDEYFTFITDCKDPK-------------------------------ACTILLRGASHH 174 (178)
T ss_dssp EEEEEEEETTEEEEEEEEESSTT-------------------------------SCEEEEEC----
T ss_pred cEEEEEEECCeEEEEEECCCCCC-------------------------------EEEEEEECCCcc
Confidence 9986 5788999999998764 589999999864
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.82 E-value=9.7e-20 Score=163.23 Aligned_cols=127 Identities=17% Similarity=0.265 Sum_probs=108.0
Q ss_pred EeeEEEeecccCcccccccccceeeecCcEEEEeccccC-------------CHHH-----------HHHHHHHHHhcCC
Q 013203 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNV-----------IRQASLPCMMQGQ 198 (447)
Q Consensus 143 ~~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~-------------~~~~-----------~~~~le~i~~~~~ 198 (447)
++|++|++++.+|.|++ .++||+|++++++++ ++++ +..++++|.++|+
T Consensus 1 i~Gvv~~k~~~~~~mpk-------~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPD-------VVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTTSCS-------EEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCCCCc-------CcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 47999999999987743 689999999998653 3333 3467888999999
Q ss_pred CEEEEecCcchhHHHHHHHhccCCCCceEEEeccCcccchhhhHHHHHHHhCCEEeeCCCCCCcCCCCCCCceeeeEEE-
Q 013203 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI- 277 (447)
Q Consensus 199 ~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~r~~~le~la~~tGa~i~~~~~~~~~~~~~~~~LG~a~~v~- 277 (447)
++|+++++|++.|+++|..+ +|+++++ +++++|+|||++|||+++++ ++++++++||+|+.|+
T Consensus 74 nVVl~~k~I~d~a~~~l~k~------gI~~v~~-----v~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKE------GIYAVRR-----VKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHT------TCEEECS-----CCHHHHHHHHHHHTCCCBSS-----TTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHC------CCEEEcc-----CCHHHHHHHHHHhCCeeeCc-----cccCCcccCccceEEEE
Confidence 99999999999999988874 5899986 45678999999999999997 8999999999999996
Q ss_pred --EecceEEEEeCCCCh
Q 013203 278 --ATMDNVVIIGGSGEL 292 (447)
Q Consensus 278 --i~~~~~~~i~g~~~~ 292 (447)
++++++++|+||++.
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 578999999999864
No 32
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=20.64 E-value=88 Score=21.19 Aligned_cols=11 Identities=45% Similarity=0.685 Sum_probs=8.1
Q ss_pred HHHHHHHhhhc
Q 013203 312 DKLKDRLAKLS 322 (447)
Q Consensus 312 ~~l~eR~a~l~ 322 (447)
.+|+.||.+|.
T Consensus 33 ~KlKqRit~lE 43 (46)
T 3swy_A 33 MKMKQRLSQLE 43 (46)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77888877764
Done!