Query 013204
Match_columns 447
No_of_seqs 170 out of 2010
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 01:28:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013204.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013204hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0161 BioA Adenosylmethionin 100.0 4.1E-83 8.9E-88 604.0 43.7 432 1-439 13-447 (449)
2 PLN02760 4-aminobutyrate:pyruv 100.0 1.9E-80 4.1E-85 615.8 50.7 447 1-447 57-503 (504)
3 COG4992 ArgD Ornithine/acetylo 100.0 2.9E-79 6.3E-84 564.4 39.5 378 13-438 22-401 (404)
4 COG0160 GabT 4-aminobutyrate a 100.0 1.4E-77 3E-82 570.7 44.0 403 14-436 37-446 (447)
5 PRK07481 hypothetical protein; 100.0 4.2E-76 9.1E-81 580.9 49.7 437 1-437 10-447 (449)
6 PRK07482 hypothetical protein; 100.0 6.9E-76 1.5E-80 580.6 50.3 438 1-439 16-458 (461)
7 PRK05965 hypothetical protein; 100.0 3E-75 6.4E-80 575.8 49.2 437 1-439 14-451 (459)
8 PRK06105 aminotransferase; Pro 100.0 4.4E-74 9.6E-79 567.6 50.3 437 1-438 16-452 (460)
9 PRK07036 hypothetical protein; 100.0 2.5E-73 5.3E-78 562.5 51.7 436 1-438 19-455 (466)
10 KOG1404 Alanine-glyoxylate ami 100.0 2.6E-74 5.6E-79 519.1 39.6 408 4-429 21-432 (442)
11 PRK07480 putative aminotransfe 100.0 3.1E-73 6.7E-78 560.3 50.3 433 1-438 18-451 (456)
12 PRK08742 adenosylmethionine--8 100.0 9.7E-73 2.1E-77 557.1 49.6 432 1-436 31-468 (472)
13 PRK07030 adenosylmethionine--8 100.0 1.3E-72 2.8E-77 556.8 50.4 432 1-436 15-447 (466)
14 PRK06943 adenosylmethionine--8 100.0 4.3E-72 9.2E-77 551.8 48.7 425 1-436 22-447 (453)
15 PRK12403 putative aminotransfe 100.0 1E-71 2.3E-76 550.7 50.4 433 1-439 22-456 (460)
16 PRK06916 adenosylmethionine--8 100.0 6.6E-72 1.4E-76 552.1 48.5 433 1-437 24-457 (460)
17 PRK07483 hypothetical protein; 100.0 1.6E-71 3.4E-76 546.9 48.6 421 12-437 9-439 (443)
18 PRK07678 aminotransferase; Val 100.0 4.7E-71 1E-75 545.3 48.7 425 1-436 18-450 (451)
19 PRK06062 hypothetical protein; 100.0 5.9E-71 1.3E-75 544.1 47.8 419 1-437 24-447 (451)
20 PRK06541 hypothetical protein; 100.0 2.2E-70 4.8E-75 540.6 50.5 432 1-437 20-457 (460)
21 PRK13360 omega amino acid--pyr 100.0 1.7E-69 3.6E-74 532.4 49.5 426 1-436 15-441 (442)
22 PRK09221 beta alanine--pyruvat 100.0 1.7E-69 3.7E-74 532.8 49.1 426 1-436 18-444 (445)
23 PRK06917 hypothetical protein; 100.0 4.1E-69 8.8E-74 530.4 49.4 419 13-438 12-440 (447)
24 PRK06173 adenosylmethionine--8 100.0 4.5E-68 9.7E-73 519.7 46.6 410 1-436 14-426 (429)
25 PRK07986 adenosylmethionine--8 100.0 5.1E-68 1.1E-72 518.5 46.3 409 1-435 13-423 (428)
26 PRK11522 putrescine--2-oxoglut 100.0 6.7E-68 1.5E-72 521.6 44.3 388 13-440 61-456 (459)
27 PRK06938 diaminobutyrate--2-ox 100.0 1.8E-67 3.9E-72 519.9 45.6 405 14-436 44-461 (464)
28 PRK05630 adenosylmethionine--8 100.0 2.4E-67 5.2E-72 514.1 45.7 407 1-435 12-420 (422)
29 TIGR03372 putres_am_tran putre 100.0 1.8E-67 3.9E-72 514.8 43.5 378 16-433 58-442 (442)
30 PRK06082 4-aminobutyrate amino 100.0 1.2E-66 2.5E-71 514.0 46.2 403 14-441 53-457 (459)
31 PRK06931 diaminobutyrate--2-ox 100.0 1.5E-66 3.3E-71 513.2 46.5 407 14-437 39-456 (459)
32 PRK05639 4-aminobutyrate amino 100.0 2E-66 4.3E-71 511.5 46.8 403 14-438 34-446 (457)
33 TIGR00709 dat 2,4-diaminobutyr 100.0 2.8E-66 6E-71 511.2 45.6 419 3-438 5-438 (442)
34 PRK05964 adenosylmethionine--8 100.0 6.4E-66 1.4E-70 508.1 46.7 411 1-436 12-423 (423)
35 PRK06058 4-aminobutyrate amino 100.0 6.9E-66 1.5E-70 509.0 45.1 400 14-435 37-442 (443)
36 PLN02974 adenosylmethionine-8- 100.0 1.1E-65 2.3E-70 528.8 48.0 428 1-433 325-816 (817)
37 PRK08593 4-aminobutyrate amino 100.0 1.5E-65 3.2E-70 505.4 46.7 407 13-438 22-432 (445)
38 KOG1402 Ornithine aminotransfe 100.0 4.4E-66 9.6E-71 454.8 32.1 382 13-434 39-426 (427)
39 PRK05769 4-aminobutyrate amino 100.0 2.1E-64 4.5E-69 496.7 47.3 401 14-436 35-440 (441)
40 PRK07495 4-aminobutyrate amino 100.0 2.7E-64 5.9E-69 493.6 45.6 396 15-437 22-423 (425)
41 PRK04612 argD acetylornithine 100.0 6.9E-64 1.5E-68 488.2 44.4 384 13-438 20-406 (408)
42 PRK08117 4-aminobutyrate amino 100.0 4E-63 8.7E-68 489.7 46.1 400 16-437 26-431 (433)
43 PRK08360 4-aminobutyrate amino 100.0 1.5E-62 3.1E-67 483.4 47.2 404 14-438 22-429 (443)
44 TIGR00700 GABAtrnsam 4-aminobu 100.0 9.4E-63 2E-67 484.8 45.9 401 13-434 13-419 (420)
45 COG0001 HemL Glutamate-1-semia 100.0 1.3E-63 2.8E-68 465.4 36.9 400 2-438 23-431 (432)
46 PRK06777 4-aminobutyrate amino 100.0 1E-62 2.2E-67 483.3 45.0 394 14-434 21-420 (421)
47 TIGR00508 bioA adenosylmethion 100.0 2.8E-62 6E-67 480.2 46.8 410 1-435 15-426 (427)
48 TIGR03246 arg_catab_astC succi 100.0 1.2E-62 2.7E-67 481.2 44.1 379 14-436 16-396 (397)
49 PRK09264 diaminobutyrate--2-ox 100.0 7.2E-63 1.6E-67 485.5 42.4 390 13-438 19-419 (425)
50 TIGR00699 GABAtrns_euk 4-amino 100.0 6.4E-63 1.4E-67 483.0 41.6 389 14-433 39-464 (464)
51 PRK06918 4-aminobutyrate amino 100.0 3E-62 6.6E-67 484.7 46.8 409 14-441 35-449 (451)
52 TIGR02407 ectoine_ectB diamino 100.0 1.1E-62 2.4E-67 481.8 42.1 385 14-435 16-412 (412)
53 PRK08297 L-lysine aminotransfe 100.0 1.7E-62 3.7E-67 482.8 43.5 404 12-436 21-442 (443)
54 PRK09792 4-aminobutyrate trans 100.0 2.1E-62 4.7E-67 481.1 43.7 394 14-434 21-420 (421)
55 KOG1401 Acetylornithine aminot 100.0 1.2E-62 2.5E-67 447.3 38.0 401 2-436 25-431 (433)
56 PRK06148 hypothetical protein; 100.0 2.4E-62 5.3E-67 522.5 46.5 399 14-436 605-1011(1013)
57 PRK03715 argD acetylornithine 100.0 2.9E-62 6.2E-67 475.8 41.6 374 13-436 16-394 (395)
58 PRK04013 argD acetylornithine/ 100.0 4.8E-62 1E-66 466.1 41.1 356 14-436 5-361 (364)
59 PRK12381 bifunctional succinyl 100.0 1.9E-61 4.2E-66 474.2 43.6 381 14-438 20-402 (406)
60 PLN00144 acetylornithine trans 100.0 9.2E-61 2E-65 464.1 41.5 371 19-436 1-381 (382)
61 PRK12389 glutamate-1-semialdeh 100.0 3E-60 6.6E-65 466.8 42.8 383 14-435 34-427 (428)
62 PLN02624 ornithine-delta-amino 100.0 9.6E-60 2.1E-64 467.7 46.7 391 14-442 56-451 (474)
63 TIGR03251 LAT_fam L-lysine 6-t 100.0 2.7E-60 5.8E-65 467.2 41.7 399 12-431 14-430 (431)
64 PRK07046 aminotransferase; Val 100.0 6.1E-60 1.3E-64 465.0 42.9 386 13-437 55-452 (453)
65 PRK06149 hypothetical protein; 100.0 1.3E-59 2.7E-64 501.9 46.8 396 14-435 566-970 (972)
66 PLN02482 glutamate-1-semialdeh 100.0 8.9E-60 1.9E-64 464.0 41.6 390 13-435 79-473 (474)
67 PRK00615 glutamate-1-semialdeh 100.0 4.9E-59 1.1E-63 455.4 42.3 386 13-436 33-429 (433)
68 PF00202 Aminotran_3: Aminotra 100.0 8.3E-61 1.8E-65 456.6 28.8 337 18-372 1-338 (339)
69 PRK04073 rocD ornithine--oxo-a 100.0 1.1E-58 2.3E-63 454.2 42.6 372 14-433 21-395 (396)
70 PRK01278 argD acetylornithine 100.0 2E-58 4.3E-63 452.1 43.6 374 14-435 12-388 (389)
71 PRK05093 argD bifunctional N-s 100.0 1.2E-56 2.6E-61 440.8 43.9 380 13-436 20-401 (403)
72 TIGR01885 Orn_aminotrans ornit 100.0 3.8E-55 8.2E-60 430.1 44.0 380 14-433 18-400 (401)
73 PRK03244 argD acetylornithine 100.0 3.8E-55 8.2E-60 430.4 43.4 372 14-437 24-396 (398)
74 PRK08088 4-aminobutyrate amino 100.0 7.1E-55 1.5E-59 429.9 44.9 398 13-436 21-424 (425)
75 PRK02936 argD acetylornithine 100.0 1E-54 2.2E-59 424.4 42.1 366 14-433 10-377 (377)
76 KOG1403 Predicted alanine-glyo 100.0 9.4E-56 2E-60 384.9 27.3 406 14-442 28-444 (452)
77 TIGR00713 hemL glutamate-1-sem 100.0 4E-54 8.7E-59 425.8 40.9 389 13-435 28-422 (423)
78 PRK00854 rocD ornithine--oxo-a 100.0 1.3E-53 2.7E-58 420.0 43.4 377 13-434 21-400 (401)
79 PRK00062 glutamate-1-semialdeh 100.0 6.3E-54 1.4E-58 422.6 41.2 390 14-436 31-425 (426)
80 PTZ00125 ornithine aminotransf 100.0 3.1E-53 6.8E-58 417.4 43.8 383 13-437 11-397 (400)
81 cd00610 OAT_like Acetyl ornith 100.0 5.3E-52 1.1E-56 410.9 43.7 403 1-433 9-413 (413)
82 PRK04260 acetylornithine amino 100.0 1.6E-51 3.5E-56 401.1 41.3 363 15-433 11-375 (375)
83 PRK02627 acetylornithine amino 100.0 2.1E-51 4.6E-56 404.1 42.5 374 13-435 19-394 (396)
84 PRK06209 glutamate-1-semialdeh 100.0 1.1E-51 2.5E-56 406.0 39.6 377 14-439 29-409 (431)
85 TIGR00707 argD acetylornithine 100.0 3.6E-46 7.9E-51 364.9 40.5 371 13-433 7-379 (379)
86 KOG1405 4-aminobutyrate aminot 100.0 2.1E-47 4.6E-52 339.6 27.0 392 15-435 58-483 (484)
87 PRK07505 hypothetical protein; 100.0 3.1E-36 6.7E-41 296.2 33.3 352 12-435 25-399 (402)
88 PLN02822 serine palmitoyltrans 100.0 2.2E-35 4.7E-40 293.7 33.0 355 16-436 93-478 (481)
89 PRK13393 5-aminolevulinate syn 100.0 9.4E-34 2E-38 278.9 32.2 335 31-436 43-397 (406)
90 COG0156 BioF 7-keto-8-aminopel 100.0 3.7E-33 8E-38 264.2 30.6 339 20-432 27-387 (388)
91 TIGR01821 5aminolev_synth 5-am 100.0 1.8E-32 3.9E-37 269.8 32.9 336 30-436 42-397 (402)
92 PRK09064 5-aminolevulinate syn 100.0 4.5E-32 9.7E-37 267.5 32.1 334 32-436 45-398 (407)
93 PLN02955 8-amino-7-oxononanoat 100.0 3.4E-31 7.3E-36 256.5 31.6 338 32-436 101-462 (476)
94 PRK07179 hypothetical protein; 100.0 2.9E-30 6.4E-35 254.3 33.1 340 13-436 42-399 (407)
95 PLN03227 serine palmitoyltrans 100.0 2.2E-30 4.8E-35 252.4 30.7 341 36-437 1-384 (392)
96 TIGR01825 gly_Cac_T_rel pyrido 100.0 2.3E-29 4.9E-34 246.8 34.5 347 15-435 16-381 (385)
97 TIGR01822 2am3keto_CoA 2-amino 100.0 9.9E-29 2.2E-33 242.9 36.1 351 14-436 19-390 (393)
98 PRK05958 8-amino-7-oxononanoat 100.0 8.1E-29 1.7E-33 243.0 34.4 342 17-433 24-385 (385)
99 KOG1359 Glycine C-acetyltransf 100.0 2.2E-28 4.8E-33 213.3 26.7 342 17-436 50-413 (417)
100 PRK06939 2-amino-3-ketobutyrat 100.0 1.6E-27 3.5E-32 234.8 35.6 348 16-435 25-393 (397)
101 PRK13392 5-aminolevulinate syn 100.0 8.1E-28 1.7E-32 237.3 32.4 336 31-436 44-398 (410)
102 PRK05937 8-amino-7-oxononanoat 100.0 3.3E-27 7.2E-32 229.5 30.7 326 33-438 4-353 (370)
103 TIGR00858 bioF 8-amino-7-oxono 100.0 1.8E-26 4E-31 224.3 33.9 338 19-430 3-360 (360)
104 PLN02483 serine palmitoyltrans 100.0 1.7E-25 3.8E-30 223.3 35.3 333 30-437 97-468 (489)
105 KOG1360 5-aminolevulinate synt 99.9 1.3E-25 2.7E-30 203.8 23.8 319 50-436 186-525 (570)
106 COG0436 Aspartate/tyrosine/aro 99.9 1.5E-24 3.3E-29 210.2 31.0 340 33-436 28-392 (393)
107 cd06454 KBL_like KBL_like; thi 99.9 8.2E-24 1.8E-28 204.7 32.4 328 33-432 1-348 (349)
108 PRK06225 aspartate aminotransf 99.9 6.5E-23 1.4E-27 200.5 32.5 343 31-438 26-379 (380)
109 COG1104 NifS Cysteine sulfinat 99.9 8.9E-24 1.9E-28 196.8 24.3 345 34-439 3-381 (386)
110 COG1168 MalY Bifunctional PLP- 99.9 2.4E-22 5.3E-27 183.4 31.2 329 50-436 39-387 (388)
111 PRK03317 histidinol-phosphate 99.9 2.5E-22 5.3E-27 195.5 30.2 325 34-434 27-363 (368)
112 COG0079 HisC Histidinol-phosph 99.9 5.2E-22 1.1E-26 189.1 29.9 322 34-435 23-354 (356)
113 PRK07682 hypothetical protein; 99.9 8.4E-22 1.8E-26 192.6 31.6 340 34-436 21-377 (378)
114 PRK01533 histidinol-phosphate 99.9 1.4E-22 3E-27 196.3 25.5 327 31-438 27-358 (366)
115 TIGR03576 pyridox_MJ0158 pyrid 99.9 4.4E-22 9.5E-27 190.5 28.4 300 46-433 29-345 (346)
116 PRK07324 transaminase; Validat 99.9 4.3E-22 9.4E-27 193.7 28.6 336 28-435 21-370 (373)
117 PRK06207 aspartate aminotransf 99.9 2.9E-21 6.2E-26 190.0 34.6 347 33-437 39-404 (405)
118 cd00613 GDC-P Glycine cleavage 99.9 4.1E-22 8.9E-27 196.3 27.2 336 40-429 23-398 (398)
119 PRK08153 histidinol-phosphate 99.9 7.1E-22 1.5E-26 192.1 28.2 326 31-437 29-367 (369)
120 PRK06108 aspartate aminotransf 99.9 4.4E-21 9.5E-26 188.0 33.8 339 34-434 25-381 (382)
121 PLN00175 aminotransferase fami 99.9 9.8E-21 2.1E-25 186.4 34.2 339 33-434 54-412 (413)
122 PRK02731 histidinol-phosphate 99.9 3.4E-21 7.3E-26 187.7 29.4 326 31-434 30-365 (367)
123 PRK09148 aminotransferase; Val 99.9 1.9E-20 4.1E-25 184.3 34.1 350 31-440 28-395 (405)
124 PRK03158 histidinol-phosphate 99.9 2.1E-21 4.5E-26 188.5 26.9 320 33-432 29-358 (359)
125 PRK08960 hypothetical protein; 99.9 2.4E-20 5.2E-25 182.7 34.4 339 32-434 31-386 (387)
126 PRK07681 aspartate aminotransf 99.9 1.6E-20 3.4E-25 184.8 32.8 337 31-431 30-384 (399)
127 PRK07309 aromatic amino acid a 99.9 3E-20 6.6E-25 182.1 34.5 342 33-437 30-390 (391)
128 PRK07366 succinyldiaminopimela 99.9 1.4E-20 3.1E-25 184.5 31.7 341 31-432 28-387 (388)
129 TIGR03392 FeS_syn_CsdA cystein 99.9 1.5E-20 3.2E-25 185.1 31.7 338 32-436 16-396 (398)
130 PRK05764 aspartate aminotransf 99.9 2.3E-20 5E-25 183.5 31.9 347 32-436 30-392 (393)
131 TIGR01141 hisC histidinol-phos 99.9 6.1E-21 1.3E-25 184.4 27.2 317 33-429 19-345 (346)
132 TIGR03402 FeS_nifS cysteine de 99.9 2.1E-20 4.5E-25 182.8 31.1 335 35-438 2-375 (379)
133 PRK08363 alanine aminotransfer 99.9 3.6E-20 7.9E-25 182.2 32.9 346 31-435 28-394 (398)
134 PRK08636 aspartate aminotransf 99.9 5.8E-20 1.3E-24 180.9 34.3 350 31-436 31-401 (403)
135 PRK00950 histidinol-phosphate 99.9 1.1E-20 2.4E-25 183.6 28.3 320 30-433 31-360 (361)
136 PRK06348 aspartate aminotransf 99.9 6.4E-20 1.4E-24 179.5 33.7 338 33-432 29-382 (384)
137 PLN00143 tyrosine/nicotianamin 99.9 7.3E-20 1.6E-24 180.2 33.8 355 27-438 26-407 (409)
138 COG0520 csdA Selenocysteine ly 99.9 3.5E-20 7.6E-25 179.5 30.8 340 33-434 23-404 (405)
139 PRK06290 aspartate aminotransf 99.9 5.3E-20 1.1E-24 180.8 32.4 351 31-437 42-407 (410)
140 PRK08068 transaminase; Reviewe 99.9 7.5E-20 1.6E-24 179.4 32.6 337 31-431 30-385 (389)
141 PRK12414 putative aminotransfe 99.9 7.5E-20 1.6E-24 178.9 32.4 337 32-431 28-383 (384)
142 PRK10874 cysteine sulfinate de 99.9 6E-20 1.3E-24 181.0 31.7 339 31-436 18-399 (401)
143 PRK06358 threonine-phosphate d 99.9 9.2E-20 2E-24 176.2 32.4 322 33-433 19-353 (354)
144 PRK09295 bifunctional cysteine 99.9 7.7E-20 1.7E-24 180.4 32.3 340 32-434 23-403 (406)
145 PRK09147 succinyldiaminopimela 99.9 1.1E-19 2.3E-24 178.7 33.1 338 31-434 27-395 (396)
146 PLN02656 tyrosine transaminase 99.9 2.9E-19 6.3E-24 176.1 35.8 353 30-437 28-405 (409)
147 PRK08056 threonine-phosphate d 99.9 8.4E-20 1.8E-24 176.8 31.2 327 30-434 17-354 (356)
148 PLN02721 threonine aldolase 99.9 5.6E-20 1.2E-24 178.2 30.0 335 34-434 6-351 (353)
149 cd06502 TA_like Low-specificit 99.9 1.7E-20 3.8E-25 180.7 26.0 324 37-431 1-337 (338)
150 cd00609 AAT_like Aspartate ami 99.9 5.5E-20 1.2E-24 177.8 29.7 327 43-430 6-349 (350)
151 PRK08175 aminotransferase; Val 99.9 1.7E-19 3.6E-24 177.2 33.2 342 32-435 28-389 (395)
152 PLN00145 tyrosine/nicotianamin 99.9 2.1E-19 4.5E-24 177.7 33.7 346 32-438 51-427 (430)
153 PRK02610 histidinol-phosphate 99.9 9.9E-20 2.1E-24 177.4 30.8 332 33-436 28-372 (374)
154 PRK13520 L-tyrosine decarboxyl 99.9 9.4E-20 2E-24 177.9 30.7 325 49-434 31-370 (371)
155 PRK13355 bifunctional HTH-doma 99.9 9.2E-20 2E-24 184.6 31.5 349 30-437 143-516 (517)
156 PRK09082 methionine aminotrans 99.9 1.3E-19 2.7E-24 177.5 31.5 337 32-431 29-385 (386)
157 PRK14809 histidinol-phosphate 99.9 5.8E-20 1.3E-24 178.1 28.7 317 31-434 28-356 (357)
158 PLN02187 rooty/superroot1 99.9 2E-19 4.4E-24 179.0 32.9 352 31-439 64-442 (462)
159 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.6E-19 3.5E-24 176.5 31.2 341 45-436 27-382 (387)
160 PRK09105 putative aminotransfe 99.9 9.7E-20 2.1E-24 176.9 29.4 318 33-433 43-368 (370)
161 PRK07337 aminotransferase; Val 99.9 2.3E-19 5.1E-24 175.9 32.4 342 32-433 29-387 (388)
162 PRK09276 LL-diaminopimelate am 99.9 1.8E-19 3.9E-24 176.6 31.3 337 31-431 29-384 (385)
163 PRK07683 aminotransferase A; V 99.9 4.6E-19 1E-23 173.5 33.9 339 33-435 28-383 (387)
164 PRK05664 threonine-phosphate d 99.9 1.1E-19 2.3E-24 174.0 28.6 304 32-435 19-328 (330)
165 TIGR03540 DapC_direct LL-diami 99.9 2.7E-19 6E-24 175.2 32.1 337 31-431 27-382 (383)
166 PRK06107 aspartate aminotransf 99.9 2.9E-19 6.2E-24 175.9 32.1 354 31-436 31-401 (402)
167 PLN02855 Bifunctional selenocy 99.9 2.1E-19 4.5E-24 178.2 31.3 344 32-437 32-420 (424)
168 PRK15481 transcriptional regul 99.9 1.4E-19 3E-24 179.8 30.0 326 34-434 86-430 (431)
169 TIGR03537 DapC succinyldiamino 99.9 3.9E-19 8.4E-24 171.8 32.2 332 35-431 2-349 (350)
170 PRK05942 aspartate aminotransf 99.9 3.3E-19 7E-24 175.1 31.8 336 31-431 33-388 (394)
171 TIGR03539 DapC_actino succinyl 99.9 1.6E-19 3.5E-24 174.9 28.8 320 31-429 19-356 (357)
172 PRK07777 aminotransferase; Val 99.9 4.3E-19 9.3E-24 174.0 31.9 339 34-433 25-384 (387)
173 PRK08361 aspartate aminotransf 99.9 2.3E-19 5E-24 176.1 30.0 341 33-435 33-390 (391)
174 PRK07568 aspartate aminotransf 99.9 9.8E-19 2.1E-23 172.2 34.5 337 32-437 29-394 (397)
175 KOG0257 Kynurenine aminotransf 99.9 5E-20 1.1E-24 170.1 23.2 279 51-372 46-344 (420)
176 TIGR01264 tyr_amTase_E tyrosin 99.9 6.2E-19 1.3E-23 173.6 32.8 342 32-435 30-399 (401)
177 PRK08912 hypothetical protein; 99.9 5.1E-19 1.1E-23 173.5 32.1 339 33-434 26-385 (387)
178 PTZ00433 tyrosine aminotransfe 99.9 6.8E-19 1.5E-23 173.7 32.8 356 25-437 25-410 (412)
179 PRK05957 aspartate aminotransf 99.9 8.4E-19 1.8E-23 171.8 33.0 340 34-436 28-386 (389)
180 PRK06959 putative threonine-ph 99.9 2E-19 4.4E-24 172.5 28.0 306 33-437 24-335 (339)
181 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3.4E-19 7.4E-24 172.8 29.9 323 50-433 10-355 (355)
182 PTZ00377 alanine aminotransfer 99.9 1.4E-18 3E-23 174.6 35.0 344 51-440 90-480 (481)
183 PRK05839 hypothetical protein; 99.9 7E-19 1.5E-23 171.4 31.8 328 31-434 22-373 (374)
184 PRK14808 histidinol-phosphate 99.9 2.8E-19 6.1E-24 171.3 28.4 321 21-431 7-333 (335)
185 PRK07865 N-succinyldiaminopime 99.9 2.9E-19 6.2E-24 173.7 28.7 321 31-430 25-363 (364)
186 cd06453 SufS_like Cysteine des 99.9 3.5E-19 7.6E-24 173.9 29.3 326 47-429 8-373 (373)
187 PRK14807 histidinol-phosphate 99.9 1E-18 2.2E-23 168.9 32.0 319 34-433 23-350 (351)
188 PLN03026 histidinol-phosphate 99.9 3.7E-19 7.9E-24 173.6 29.0 319 32-431 51-378 (380)
189 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 3.6E-19 7.9E-24 173.1 28.7 308 77-435 51-368 (370)
190 PRK07550 hypothetical protein; 99.9 1.4E-18 3.1E-23 170.2 33.0 340 32-432 28-384 (386)
191 PRK05387 histidinol-phosphate 99.9 1.7E-19 3.8E-24 174.7 25.7 321 32-434 23-352 (353)
192 PRK06425 histidinol-phosphate 99.9 7.3E-19 1.6E-23 168.5 29.3 283 75-433 38-331 (332)
193 TIGR03538 DapC_gpp succinyldia 99.9 1.5E-18 3.2E-23 170.5 32.1 337 30-432 25-392 (393)
194 PRK02948 cysteine desulfurase; 99.9 4.6E-19 1E-23 173.5 27.8 335 34-436 2-375 (381)
195 PRK04870 histidinol-phosphate 99.9 6.7E-19 1.5E-23 170.7 27.9 320 32-433 25-356 (356)
196 PRK06855 aminotransferase; Val 99.9 2.2E-18 4.7E-23 170.9 32.1 357 31-435 30-429 (433)
197 PRK03321 putative aminotransfe 99.8 3.2E-19 6.9E-24 172.7 24.9 320 34-434 23-350 (352)
198 PRK13034 serine hydroxymethylt 99.8 2.9E-18 6.4E-23 168.6 32.0 321 50-435 40-392 (416)
199 TIGR03403 nifS_epsilon cystein 99.8 1.9E-18 4.2E-23 169.1 30.6 340 35-438 2-378 (382)
200 PF00155 Aminotran_1_2: Aminot 99.8 5.4E-19 1.2E-23 172.0 26.1 334 34-429 2-363 (363)
201 PRK07590 L,L-diaminopimelate a 99.8 3.7E-18 8.1E-23 168.4 32.3 344 32-432 33-408 (409)
202 cd06451 AGAT_like Alanine-glyo 99.8 1.5E-18 3.3E-23 168.3 29.1 322 50-434 10-356 (356)
203 TIGR01979 sufS cysteine desulf 99.8 3.8E-18 8.3E-23 168.3 32.0 341 34-436 20-402 (403)
204 TIGR01976 am_tr_V_VC1184 cyste 99.8 1.5E-18 3.1E-23 171.0 28.9 332 33-429 18-397 (397)
205 TIGR01140 L_thr_O3P_dcar L-thr 99.8 1.6E-18 3.5E-23 166.0 27.5 303 32-429 16-329 (330)
206 PLN02231 alanine transaminase 99.8 3.4E-18 7.4E-23 172.1 31.1 345 51-441 142-533 (534)
207 TIGR02006 IscS cysteine desulf 99.8 6.4E-18 1.4E-22 166.4 32.2 337 33-438 4-380 (402)
208 PRK09265 aminotransferase AlaT 99.8 6.8E-18 1.5E-22 166.3 32.4 344 30-436 30-402 (404)
209 PLN02672 methionine S-methyltr 99.8 7.1E-18 1.5E-22 177.6 34.1 352 26-434 690-1079(1082)
210 TIGR01814 kynureninase kynuren 99.8 5.4E-18 1.2E-22 167.1 30.5 342 31-433 26-405 (406)
211 PRK08354 putative aminotransfe 99.8 7.7E-18 1.7E-22 159.9 30.1 297 30-432 5-309 (311)
212 TIGR01265 tyr_nico_aTase tyros 99.8 1.4E-17 3E-22 164.1 32.7 346 31-435 29-401 (403)
213 PRK01688 histidinol-phosphate 99.8 8.4E-19 1.8E-23 169.3 23.5 285 75-430 55-351 (351)
214 PRK09257 aromatic amino acid a 99.8 2.9E-18 6.3E-23 168.5 27.6 341 34-433 27-396 (396)
215 PRK05166 histidinol-phosphate 99.8 6E-18 1.3E-22 164.8 29.2 323 32-433 35-369 (371)
216 PRK10534 L-threonine aldolase; 99.8 2.2E-18 4.7E-23 165.6 25.2 323 35-433 1-331 (333)
217 PRK06836 aspartate aminotransf 99.8 1.8E-17 4E-22 162.7 31.8 341 32-437 32-393 (394)
218 TIGR02326 transamin_PhnW 2-ami 99.8 1.4E-17 3.1E-22 161.9 30.7 302 77-433 35-360 (363)
219 PRK09440 avtA valine--pyruvate 99.8 2.2E-17 4.8E-22 163.5 32.3 351 34-438 31-414 (416)
220 PLN02607 1-aminocyclopropane-1 99.8 9.4E-18 2E-22 166.1 29.3 310 74-440 96-442 (447)
221 PF00266 Aminotran_5: Aminotra 99.8 5E-18 1.1E-22 165.5 26.9 327 35-425 2-371 (371)
222 TIGR03542 DAPAT_plant LL-diami 99.8 1.1E-17 2.4E-22 164.7 29.5 343 31-432 31-401 (402)
223 PRK07392 threonine-phosphate d 99.8 1.8E-17 3.8E-22 160.9 30.5 324 32-433 21-357 (360)
224 PLN02376 1-aminocyclopropane-1 99.8 1.4E-17 3.1E-22 166.6 30.4 311 76-438 97-441 (496)
225 PTZ00376 aspartate aminotransf 99.8 8E-18 1.7E-22 165.7 28.1 341 32-434 28-402 (404)
226 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 1.4E-17 3.1E-22 161.6 29.5 336 48-433 11-360 (361)
227 KOG0259 Tyrosine aminotransfer 99.8 6.2E-17 1.3E-21 147.2 30.1 330 51-437 80-435 (447)
228 TIGR01977 am_tr_V_EF2568 cyste 99.8 1.7E-17 3.7E-22 162.2 28.9 323 50-431 12-375 (376)
229 KOG1358 Serine palmitoyltransf 99.8 9.7E-19 2.1E-23 159.2 18.2 355 17-435 79-465 (467)
230 PLN02409 serine--glyoxylate am 99.8 2.3E-17 5E-22 162.0 29.7 305 77-436 42-373 (401)
231 PRK13479 2-aminoethylphosphona 99.8 7.5E-17 1.6E-21 157.2 32.1 304 77-436 37-364 (368)
232 TIGR03812 tyr_de_CO2_Arch tyro 99.8 7.7E-17 1.7E-21 157.4 32.2 322 50-431 32-372 (373)
233 TIGR01437 selA_rel uncharacter 99.8 1.2E-16 2.6E-21 154.5 32.5 328 33-433 8-363 (363)
234 PRK07908 hypothetical protein; 99.8 8.2E-17 1.8E-21 155.6 30.9 312 32-434 21-346 (349)
235 PLN02651 cysteine desulfurase 99.8 2.8E-17 6.2E-22 159.7 26.7 321 35-423 2-364 (364)
236 PRK03967 histidinol-phosphate 99.8 4.8E-17 1.1E-21 156.2 27.6 310 31-434 16-333 (337)
237 PLN02450 1-aminocyclopropane-1 99.8 6.9E-17 1.5E-21 161.2 29.5 308 77-437 90-432 (468)
238 COG2008 GLY1 Threonine aldolas 99.8 1.3E-17 2.9E-22 152.3 22.1 328 36-433 2-341 (342)
239 PRK13238 tnaA tryptophanase/L- 99.8 4.9E-16 1.1E-20 153.8 34.2 335 53-434 58-432 (460)
240 PRK09275 aspartate aminotransf 99.8 1.2E-16 2.5E-21 158.9 28.6 348 48-442 111-524 (527)
241 PRK04635 histidinol-phosphate 99.8 3.8E-17 8.2E-22 158.1 24.7 281 78-432 61-352 (354)
242 KOG1357 Serine palmitoyltransf 99.8 1.1E-17 2.5E-22 155.0 17.9 315 50-434 156-501 (519)
243 PLN02397 aspartate transaminas 99.8 1.9E-16 4.1E-21 156.5 27.9 256 127-434 142-420 (423)
244 PRK04781 histidinol-phosphate 99.8 1.2E-16 2.7E-21 154.9 25.8 289 79-433 61-361 (364)
245 COG1167 ARO8 Transcriptional r 99.8 1.5E-15 3.3E-20 150.8 33.5 345 30-437 86-457 (459)
246 PRK08637 hypothetical protein; 99.8 4.7E-16 1E-20 152.4 28.8 287 96-436 70-387 (388)
247 PRK14012 cysteine desulfurase; 99.8 2.4E-15 5.1E-20 148.3 33.3 338 33-438 4-382 (404)
248 TIGR03801 asp_4_decarbox aspar 99.8 1.8E-16 4E-21 157.3 25.3 351 48-439 105-520 (521)
249 KOG1368 Threonine aldolase [Am 99.8 1.6E-16 3.5E-21 139.9 21.8 326 34-433 22-366 (384)
250 PRK00011 glyA serine hydroxyme 99.8 2.6E-15 5.6E-20 148.8 33.0 333 33-435 25-389 (416)
251 cd00378 SHMT Serine-glycine hy 99.8 1.3E-15 2.8E-20 150.3 29.6 333 33-435 19-385 (402)
252 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.4E-15 3.1E-20 147.3 29.2 305 56-430 3-352 (352)
253 cd06450 DOPA_deC_like DOPA dec 99.7 5E-16 1.1E-20 150.0 25.3 291 76-431 37-344 (345)
254 COG0075 Serine-pyruvate aminot 99.7 3.9E-15 8.5E-20 140.3 28.9 326 50-437 16-365 (383)
255 PLN02368 alanine transaminase 99.7 1.2E-15 2.5E-20 149.3 25.5 250 75-368 109-391 (407)
256 PRK04366 glycine dehydrogenase 99.7 8.3E-15 1.8E-19 146.6 30.8 345 49-444 81-457 (481)
257 COG3977 Alanine-alpha-ketoisov 99.7 6.7E-15 1.4E-19 129.9 25.9 311 73-436 74-412 (417)
258 KOG1549 Cysteine desulfurase N 99.7 1.3E-15 2.9E-20 142.9 22.7 349 33-438 44-421 (428)
259 PTZ00094 serine hydroxymethylt 99.7 6.6E-15 1.4E-19 146.7 28.9 346 33-435 34-408 (452)
260 PRK13580 serine hydroxymethylt 99.7 1.9E-14 4.2E-19 140.3 30.2 215 190-435 209-445 (493)
261 cd00614 CGS_like CGS_like: Cys 99.7 9.2E-16 2E-20 149.0 20.7 234 75-372 38-293 (369)
262 cd00617 Tnase_like Tryptophana 99.7 1.2E-14 2.7E-19 142.0 28.5 351 30-435 17-408 (431)
263 PRK03080 phosphoserine aminotr 99.7 5.1E-15 1.1E-19 144.2 25.7 320 50-438 23-376 (378)
264 PLN03226 serine hydroxymethylt 99.7 2.1E-14 4.5E-19 142.6 29.9 327 50-435 46-419 (475)
265 PLN02242 methionine gamma-lyas 99.7 3.4E-15 7.4E-20 146.4 22.8 242 75-372 74-334 (418)
266 PRK06767 methionine gamma-lyas 99.7 4.4E-15 9.4E-20 144.9 21.7 286 75-434 59-384 (386)
267 PLN02414 glycine dehydrogenase 99.7 4.7E-14 1E-18 148.8 30.5 352 37-438 520-910 (993)
268 TIGR01788 Glu-decarb-GAD gluta 99.7 1.8E-13 3.8E-18 134.2 32.5 345 49-436 52-430 (431)
269 PRK02769 histidine decarboxyla 99.7 3.5E-13 7.7E-18 130.3 33.0 297 76-435 64-372 (380)
270 KOG0256 1-aminocyclopropane-1- 99.7 1.2E-13 2.6E-18 127.1 27.5 306 78-435 126-461 (471)
271 TIGR03235 DNA_S_dndA cysteine 99.7 2.6E-14 5.6E-19 138.5 24.1 299 48-405 8-321 (353)
272 TIGR01325 O_suc_HS_sulf O-succ 99.7 1.3E-14 2.8E-19 141.3 21.7 237 75-372 52-306 (380)
273 PLN03032 serine decarboxylase; 99.7 4.5E-13 9.7E-18 128.6 31.1 314 51-431 36-372 (374)
274 PRK08249 cystathionine gamma-s 99.6 3.1E-14 6.8E-19 138.9 22.9 235 75-373 62-317 (398)
275 PRK12566 glycine dehydrogenase 99.6 3.3E-13 7.2E-18 139.8 30.0 315 76-438 542-879 (954)
276 TIGR01328 met_gam_lyase methio 99.6 4.9E-14 1.1E-18 137.5 22.6 239 75-372 57-313 (391)
277 PRK05367 glycine dehydrogenase 99.6 4E-13 8.7E-18 142.4 31.1 315 77-438 542-878 (954)
278 TIGR01364 serC_1 phosphoserine 99.6 2.4E-13 5.2E-18 130.5 26.4 320 50-434 3-347 (349)
279 PRK06234 methionine gamma-lyas 99.6 4.2E-14 9.1E-19 138.5 21.4 214 75-350 62-283 (400)
280 PRK06460 hypothetical protein; 99.6 9.7E-14 2.1E-18 134.8 22.7 235 75-373 43-298 (376)
281 PRK08133 O-succinylhomoserine 99.6 8E-14 1.7E-18 136.0 21.0 234 75-372 59-313 (390)
282 PRK00451 glycine dehydrogenase 99.6 2.9E-13 6.3E-18 135.3 25.4 287 79-433 114-446 (447)
283 PRK07049 methionine gamma-lyas 99.6 1.4E-13 3.1E-18 135.5 22.7 240 75-373 81-350 (427)
284 TIGR03588 PseC UDP-4-keto-6-de 99.6 3.9E-12 8.5E-17 124.4 32.3 317 52-433 10-380 (380)
285 TIGR01366 serC_3 phosphoserine 99.6 1.8E-13 3.9E-18 132.3 22.1 318 50-435 14-360 (361)
286 TIGR01324 cysta_beta_ly_B cyst 99.6 1.5E-13 3.1E-18 133.2 21.3 234 76-373 49-303 (377)
287 TIGR02379 ECA_wecE TDP-4-keto- 99.6 5.2E-12 1.1E-16 122.6 32.2 312 52-433 11-375 (376)
288 PRK08247 cystathionine gamma-s 99.6 1.4E-13 3E-18 133.5 21.2 234 74-372 49-288 (366)
289 PRK07582 cystathionine gamma-l 99.6 8E-13 1.7E-17 128.0 25.9 273 75-430 49-364 (366)
290 PRK07504 O-succinylhomoserine 99.6 2.6E-13 5.7E-18 132.7 22.7 237 75-372 63-318 (398)
291 PRK07810 O-succinylhomoserine 99.6 2.8E-13 6E-18 132.5 22.4 235 75-373 68-324 (403)
292 PRK11658 UDP-4-amino-4-deoxy-L 99.6 5.9E-12 1.3E-16 122.8 31.7 314 52-433 14-377 (379)
293 PRK08776 cystathionine gamma-s 99.6 3.9E-13 8.3E-18 131.5 23.2 235 75-373 58-314 (405)
294 KOG2862 Alanine-glyoxylate ami 99.6 2E-12 4.3E-17 115.0 24.8 289 94-435 67-382 (385)
295 PRK05355 3-phosphoserine/phosp 99.6 8.5E-13 1.8E-17 127.4 24.5 320 50-435 14-358 (360)
296 TIGR02080 O_succ_thio_ly O-suc 99.6 4.5E-13 9.7E-18 130.2 22.2 238 75-373 49-305 (382)
297 PRK06084 O-acetylhomoserine am 99.6 3.7E-13 8.1E-18 132.3 21.7 162 75-288 56-219 (425)
298 PRK05968 hypothetical protein; 99.6 6.2E-13 1.3E-17 129.8 23.1 234 75-372 61-310 (389)
299 PRK07503 methionine gamma-lyas 99.6 7.5E-13 1.6E-17 129.7 23.5 215 75-351 63-283 (403)
300 PRK08045 cystathionine gamma-s 99.6 8.8E-13 1.9E-17 128.3 23.5 238 75-373 50-306 (386)
301 PRK08861 cystathionine gamma-s 99.6 5.5E-13 1.2E-17 129.3 21.0 237 75-372 51-306 (388)
302 PRK08574 cystathionine gamma-s 99.6 3.8E-13 8.3E-18 130.8 20.0 234 75-372 51-307 (385)
303 PRK07811 cystathionine gamma-s 99.5 6.1E-13 1.3E-17 129.8 21.1 237 75-372 59-314 (388)
304 PLN02880 tyrosine decarboxylas 99.5 1.1E-11 2.3E-16 123.9 30.2 333 76-438 121-487 (490)
305 PRK13237 tyrosine phenol-lyase 99.5 3.1E-11 6.8E-16 116.7 30.7 352 30-435 42-433 (460)
306 TIGR00461 gcvP glycine dehydro 99.5 2.7E-11 5.9E-16 126.6 32.3 315 77-438 530-870 (939)
307 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 1E-12 2.2E-17 129.5 20.6 160 75-289 55-219 (418)
308 PRK07269 cystathionine gamma-s 99.5 1.6E-12 3.5E-17 125.4 21.5 231 75-372 52-288 (364)
309 PLN02724 Molybdenum cofactor s 99.5 1.3E-11 2.9E-16 131.0 30.3 358 31-434 33-487 (805)
310 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.5 4.7E-11 1E-15 116.4 31.9 311 52-433 11-374 (375)
311 PRK09028 cystathionine beta-ly 99.5 1.9E-12 4.1E-17 125.5 21.4 235 77-372 61-313 (394)
312 PRK07050 cystathionine beta-ly 99.5 4.7E-12 1E-16 123.6 23.7 213 75-351 63-282 (394)
313 cd00611 PSAT_like Phosphoserin 99.5 5.8E-12 1.2E-16 121.8 23.9 321 50-432 10-353 (355)
314 COG1003 GcvP Glycine cleavage 99.5 9.6E-12 2.1E-16 115.8 23.8 311 77-440 109-452 (496)
315 TIGR02618 tyr_phenol_ly tyrosi 99.5 4.5E-11 9.7E-16 115.3 29.4 351 30-435 35-426 (450)
316 PRK15407 lipopolysaccharide bi 99.5 6.9E-11 1.5E-15 116.8 31.5 300 78-434 64-435 (438)
317 PLN02509 cystathionine beta-ly 99.5 5.5E-12 1.2E-16 124.4 23.6 211 76-351 132-349 (464)
318 PRK05994 O-acetylhomoserine am 99.5 4.1E-12 8.8E-17 125.3 22.6 158 75-287 61-223 (427)
319 TIGR01329 cysta_beta_ly_E cyst 99.5 2.5E-12 5.4E-17 125.0 20.9 165 76-296 46-217 (378)
320 PLN02263 serine decarboxylase 99.5 1.5E-10 3.3E-15 112.9 32.8 296 76-434 132-442 (470)
321 PRK08248 O-acetylhomoserine am 99.5 3.6E-12 7.7E-17 125.5 21.1 158 75-287 62-224 (431)
322 PLN02590 probable tyrosine dec 99.5 2.7E-10 5.8E-15 114.1 34.1 329 77-437 170-534 (539)
323 PRK08064 cystathionine beta-ly 99.5 1.7E-11 3.7E-16 119.7 24.2 166 75-296 52-224 (390)
324 PRK04311 selenocysteine syntha 99.5 4.1E-10 9E-15 111.3 33.7 318 50-434 98-463 (464)
325 TIGR03799 NOD_PanD_pyr putativ 99.5 9.9E-11 2.2E-15 117.3 29.7 302 97-428 161-518 (522)
326 KOG0633 Histidinol phosphate a 99.5 9.1E-12 2E-16 108.1 18.9 276 93-432 84-374 (375)
327 PRK06176 cystathionine gamma-s 99.5 6.2E-12 1.3E-16 122.2 20.0 169 75-296 48-220 (380)
328 COG1103 Archaea-specific pyrid 99.5 7.5E-11 1.6E-15 103.1 24.3 332 50-436 29-381 (382)
329 cd01494 AAT_I Aspartate aminot 99.5 4.1E-12 8.8E-17 109.2 16.4 167 79-288 2-170 (170)
330 PRK07812 O-acetylhomoserine am 99.4 1.6E-11 3.6E-16 120.7 22.3 161 76-287 68-230 (436)
331 TIGR00474 selA seryl-tRNA(sec) 99.4 5.8E-10 1.2E-14 109.9 32.7 310 50-429 93-453 (454)
332 PRK07671 cystathionine beta-ly 99.4 1.9E-11 4.1E-16 118.7 21.9 232 75-371 48-301 (377)
333 PRK05967 cystathionine beta-ly 99.4 2.5E-11 5.5E-16 117.4 22.5 235 75-373 62-317 (395)
334 TIGR03531 selenium_SpcS O-phos 99.4 7.9E-11 1.7E-15 115.1 25.9 299 78-433 106-444 (444)
335 PRK08134 O-acetylhomoserine am 99.4 3.5E-11 7.6E-16 118.5 22.9 160 75-287 62-224 (433)
336 PF01041 DegT_DnrJ_EryC1: DegT 99.4 2.9E-10 6.4E-15 110.3 29.0 310 52-430 5-363 (363)
337 PRK06702 O-acetylhomoserine am 99.4 3.9E-11 8.4E-16 117.4 22.7 235 76-372 60-347 (432)
338 COG0399 WecE Predicted pyridox 99.4 5.9E-10 1.3E-14 105.7 29.2 314 52-435 15-373 (374)
339 PRK05939 hypothetical protein; 99.4 4.8E-11 1E-15 116.5 21.8 159 75-288 45-207 (397)
340 cd00615 Orn_deC_like Ornithine 99.4 8.4E-12 1.8E-16 117.5 16.0 229 74-349 56-293 (294)
341 KOG0634 Aromatic amino acid am 99.4 1.7E-09 3.7E-14 101.0 30.3 292 96-436 125-467 (472)
342 PRK08114 cystathionine beta-ly 99.4 4.8E-11 1E-15 115.4 20.0 238 75-373 60-317 (395)
343 COG0112 GlyA Glycine/serine hy 99.3 5E-09 1.1E-13 97.2 29.0 332 50-446 38-408 (413)
344 TIGR02617 tnaA_trp_ase tryptop 99.3 5.7E-09 1.2E-13 100.0 29.7 357 30-435 38-441 (467)
345 PLN02271 serine hydroxymethylt 99.3 4.9E-09 1.1E-13 103.3 29.5 278 103-434 222-539 (586)
346 PRK05613 O-acetylhomoserine am 99.3 4.6E-10 9.9E-15 110.6 20.9 159 75-287 67-230 (437)
347 COG0076 GadB Glutamate decarbo 99.3 2.7E-09 5.9E-14 105.1 26.3 288 50-371 74-379 (460)
348 PF01053 Cys_Met_Meta_PP: Cys/ 99.3 2E-09 4.4E-14 104.0 24.4 236 75-374 53-312 (386)
349 PRK06434 cystathionine gamma-l 99.3 4.2E-10 9.1E-15 108.9 19.5 234 75-372 62-308 (384)
350 PLN02452 phosphoserine transam 99.2 3E-09 6.5E-14 102.3 22.8 333 34-435 7-363 (365)
351 TIGR01365 serC_2 phosphoserine 99.2 1E-08 2.3E-13 98.6 25.3 301 77-434 39-372 (374)
352 COG3844 Kynureninase [Amino ac 99.2 4E-08 8.6E-13 88.7 25.6 220 191-437 157-404 (407)
353 PF01212 Beta_elim_lyase: Beta 99.2 3.1E-10 6.6E-15 105.5 12.1 197 50-295 7-215 (290)
354 PRK12462 phosphoserine aminotr 99.1 3.1E-08 6.8E-13 94.4 25.1 200 204-435 143-362 (364)
355 PLN02414 glycine dehydrogenase 99.1 3.5E-08 7.5E-13 105.0 26.7 312 50-431 117-465 (993)
356 PF00464 SHMT: Serine hydroxym 99.1 1.4E-08 3E-13 97.4 19.1 206 190-427 158-397 (399)
357 KOG0053 Cystathionine beta-lya 99.0 4.2E-08 9E-13 92.7 21.1 192 76-326 76-271 (409)
358 PF12897 Aminotran_MocR: Alani 99.0 1.4E-07 3E-12 87.7 23.8 308 75-437 67-417 (425)
359 KOG0258 Alanine aminotransfera 99.0 7.1E-08 1.5E-12 89.0 21.7 330 51-436 88-470 (475)
360 COG2873 MET17 O-acetylhomoseri 99.0 6.2E-09 1.3E-13 95.6 14.7 196 45-295 33-230 (426)
361 PF01276 OKR_DC_1: Orn/Lys/Arg 99.0 7.7E-08 1.7E-12 92.8 21.4 234 75-351 64-317 (417)
362 COG0626 MetC Cystathionine bet 99.0 5.9E-08 1.3E-12 92.8 20.4 239 76-373 62-319 (396)
363 PF00282 Pyridoxal_deC: Pyrido 99.0 5.2E-08 1.1E-12 94.3 20.4 242 80-351 82-354 (373)
364 PRK15029 arginine decarboxylas 99.0 1.5E-07 3.2E-12 97.5 24.4 316 77-434 205-603 (755)
365 COG3033 TnaA Tryptophanase [Am 99.0 5.2E-06 1.1E-10 76.2 29.7 355 30-435 43-444 (471)
366 PRK05367 glycine dehydrogenase 98.9 1.8E-07 4E-12 99.9 23.8 284 78-430 122-437 (954)
367 PRK13578 ornithine decarboxyla 98.9 1.3E-06 2.8E-11 89.8 26.2 316 77-434 174-564 (720)
368 PRK15399 lysine decarboxylase 98.9 2.8E-06 6.1E-11 87.2 28.1 311 78-434 196-558 (713)
369 PRK15400 lysine decarboxylase 98.8 4.1E-06 8.8E-11 86.1 25.0 308 77-433 195-557 (714)
370 COG1448 TyrB Aspartate/tyrosin 98.7 2.4E-06 5.1E-11 79.5 20.5 338 34-432 27-395 (396)
371 KOG2040 Glycine dehydrogenase 98.7 2.8E-06 6E-11 83.4 20.0 315 77-438 582-921 (1001)
372 COG1921 SelA Selenocysteine sy 98.6 6E-06 1.3E-10 78.0 19.1 244 34-332 21-273 (395)
373 TIGR03811 tyr_de_CO2_Ent tyros 98.6 0.00031 6.7E-09 71.8 32.9 248 75-350 121-474 (608)
374 KOG1383 Glutamate decarboxylas 98.5 5.7E-05 1.2E-09 72.0 21.7 354 30-439 76-450 (491)
375 TIGR00461 gcvP glycine dehydro 98.3 0.00022 4.8E-09 75.6 24.8 286 77-430 109-426 (939)
376 KOG3846 L-kynurenine hydrolase 98.3 0.00022 4.8E-09 64.3 20.4 343 45-437 74-463 (465)
377 PF03841 SelA: L-seryl-tRNA se 98.3 2.1E-06 4.6E-11 80.3 8.0 124 191-329 127-260 (367)
378 PF02347 GDC-P: Glycine cleava 98.3 9.8E-05 2.1E-09 71.6 18.9 286 77-429 110-429 (429)
379 KOG0629 Glutamate decarboxylas 98.2 6.2E-05 1.4E-09 70.8 16.3 323 81-432 145-506 (510)
380 COG0403 GcvP Glycine cleavage 98.2 0.0052 1.1E-07 58.5 27.7 290 81-433 124-448 (450)
381 PF04864 Alliinase_C: Allinase 98.1 0.00028 6.2E-09 65.2 17.6 281 78-431 44-361 (363)
382 PF05889 SLA_LP_auto_ag: Solub 98.1 0.00019 4E-09 68.1 16.7 222 190-434 141-389 (389)
383 COG1982 LdcC Arginine/lysine/o 98.1 0.0017 3.6E-08 64.7 23.1 135 75-248 68-205 (557)
384 KOG0628 Aromatic-L-amino-acid/ 98.0 0.014 3E-07 56.1 28.4 295 98-439 142-475 (511)
385 PF06838 Met_gamma_lyase: Meth 98.0 0.00097 2.1E-08 62.3 18.1 212 50-297 25-247 (403)
386 COG1932 SerC Phosphoserine ami 97.9 0.01 2.3E-07 55.5 23.9 202 205-435 145-363 (365)
387 KOG2467 Glycine/serine hydroxy 97.8 0.0097 2.1E-07 55.4 21.2 218 190-434 178-425 (477)
388 PRK12566 glycine dehydrogenase 97.5 0.064 1.4E-06 57.3 24.5 200 203-430 207-439 (954)
389 KOG1412 Aspartate aminotransfe 97.2 0.016 3.4E-07 52.8 13.9 196 214-437 188-407 (410)
390 PLN02994 1-aminocyclopropane-1 95.6 0.076 1.6E-06 44.4 8.3 59 73-139 92-153 (153)
391 KOG3843 Predicted serine hydro 95.6 0.085 1.8E-06 47.0 8.8 56 189-248 142-197 (432)
392 COG4100 Cystathionine beta-lya 95.1 1.2 2.6E-05 40.8 14.5 185 78-296 66-257 (416)
393 KOG1411 Aspartate aminotransfe 92.3 1.8 3.8E-05 40.6 10.6 91 203-296 198-299 (427)
394 KOG2040 Glycine dehydrogenase 68.9 1.5E+02 0.0033 30.9 21.0 43 388-430 435-478 (1001)
395 COG1105 FruK Fructose-1-phosph 63.5 32 0.00069 32.4 7.3 36 207-246 132-167 (310)
396 smart00642 Aamy Alpha-amylase 61.7 21 0.00045 30.2 5.5 45 204-248 32-93 (166)
397 COG0821 gcpE 1-hydroxy-2-methy 57.1 1.5E+02 0.0033 28.1 10.4 27 220-246 56-82 (361)
398 COG0648 Nfo Endonuclease IV [D 56.8 61 0.0013 30.0 7.9 55 190-248 124-179 (280)
399 PF13167 GTP-bdg_N: GTP-bindin 51.6 1E+02 0.0023 23.3 7.3 58 190-248 10-68 (95)
400 PF13481 AAA_25: AAA domain; P 51.2 35 0.00076 29.3 5.4 51 191-243 130-184 (193)
401 COG0108 RibB 3,4-dihydroxy-2-b 48.6 34 0.00073 29.8 4.5 36 203-243 155-190 (203)
402 KOG2790 Phosphoserine aminotra 45.3 2.1E+02 0.0046 26.6 9.1 47 388-434 318-367 (370)
403 COG1435 Tdk Thymidine kinase [ 44.1 2.2E+02 0.0048 24.9 9.7 48 191-244 68-116 (201)
404 PRK13505 formate--tetrahydrofo 42.1 3.6E+02 0.0078 27.7 11.2 52 191-248 359-411 (557)
405 TIGR00612 ispG_gcpE 1-hydroxy- 41.4 1.6E+02 0.0035 28.0 8.1 26 220-245 54-79 (346)
406 TIGR00629 uvde UV damage endon 38.6 3.5E+02 0.0076 25.6 10.4 21 227-247 201-221 (312)
407 KOG1663 O-methyltransferase [S 37.8 3E+02 0.0066 24.7 11.5 152 50-248 33-186 (237)
408 cd01821 Rhamnogalacturan_acety 37.7 91 0.002 26.9 5.9 52 191-242 94-150 (198)
409 COG1349 GlpR Transcriptional r 35.0 3.5E+02 0.0076 24.6 10.9 49 204-254 166-215 (253)
410 cd01822 Lysophospholipase_L1_l 34.6 82 0.0018 26.3 5.0 52 191-242 88-139 (177)
411 KOG2433 Uncharacterized conser 34.2 2E+02 0.0044 27.9 7.6 85 50-141 434-541 (577)
412 COG0352 ThiE Thiamine monophos 34.0 38 0.00083 29.9 2.8 48 191-245 25-72 (211)
413 cd04937 ACT_AKi-DapG-BS_2 ACT 33.2 1.6E+02 0.0034 20.0 5.4 45 387-433 17-62 (64)
414 PLN02672 methionine S-methyltr 31.4 5E+02 0.011 29.4 11.2 49 191-246 517-565 (1082)
415 cd04920 ACT_AKiii-DAPDC_2 ACT 31.1 1.5E+02 0.0031 20.2 4.9 44 388-433 17-61 (63)
416 PF00926 DHBP_synthase: 3,4-di 30.6 93 0.002 27.1 4.6 38 204-246 152-190 (194)
417 COG1453 Predicted oxidoreducta 29.9 5.1E+02 0.011 25.2 9.5 60 202-276 194-253 (391)
418 TIGR00506 ribB 3,4-dihydroxy-2 29.3 1.2E+02 0.0025 26.6 4.9 34 205-243 158-191 (199)
419 TIGR03772 anch_rpt_subst ancho 28.8 2.2E+02 0.0047 28.8 7.4 43 191-242 407-449 (479)
420 cd01017 AdcA Metal binding pro 28.2 2.6E+02 0.0055 25.9 7.5 41 191-242 207-247 (282)
421 PF07905 PucR: Purine cataboli 27.5 1.3E+02 0.0029 23.7 4.8 45 192-243 60-104 (123)
422 COG0296 GlgB 1,4-alpha-glucan 27.3 71 0.0015 33.3 3.8 33 223-255 212-244 (628)
423 PRK13600 putative ribosomal pr 27.1 1.3E+02 0.0029 22.2 4.2 29 224-252 41-69 (84)
424 PF03652 UPF0081: Uncharacteri 27.0 3.2E+02 0.007 22.1 7.0 56 190-248 40-98 (135)
425 PRK00910 ribB 3,4-dihydroxy-2- 26.6 1.4E+02 0.003 26.6 5.0 38 205-247 169-207 (218)
426 cd01840 SGNH_hydrolase_yrhL_li 26.3 1.8E+02 0.004 23.7 5.6 47 191-242 67-114 (150)
427 PRK13601 putative L7Ae-like ri 26.2 1.3E+02 0.0029 22.0 4.1 38 203-248 23-60 (82)
428 COG0616 SppA Periplasmic serin 26.0 1.8E+02 0.004 27.5 6.1 94 191-297 83-179 (317)
429 COG0742 N6-adenine-specific me 25.9 4.2E+02 0.0092 22.9 7.7 16 29-44 41-56 (187)
430 cd04915 ACT_AK-Ectoine_2 ACT d 25.9 2.2E+02 0.0049 19.5 5.2 44 388-433 18-64 (66)
431 cd01834 SGNH_hydrolase_like_2 25.5 1.8E+02 0.0039 24.4 5.7 52 191-242 89-151 (191)
432 PRK00014 ribB 3,4-dihydroxy-2- 25.0 1.5E+02 0.0033 26.5 4.9 39 205-248 173-212 (230)
433 PF06153 DUF970: Protein of un 24.4 1.5E+02 0.0032 23.1 4.2 44 388-435 13-66 (109)
434 KOG0352 ATP-dependent DNA heli 24.3 1.7E+02 0.0037 28.8 5.4 57 203-273 112-169 (641)
435 smart00839 ELFV_dehydrog Gluta 24.1 3.3E+02 0.0071 20.8 6.4 48 391-438 40-97 (102)
436 cd00984 DnaB_C DnaB helicase C 23.8 1.9E+02 0.0041 25.8 5.7 40 204-243 123-168 (242)
437 PRK01792 ribB 3,4-dihydroxy-2- 23.8 1.6E+02 0.0036 26.0 4.9 38 204-246 167-205 (214)
438 PF12138 Spherulin4: Spherulat 23.6 2.3E+02 0.005 25.9 6.1 51 191-242 19-71 (253)
439 COG4799 Acetyl-CoA carboxylase 23.6 2.9E+02 0.0062 28.2 7.1 44 207-250 327-371 (526)
440 KOG3974 Predicted sugar kinase 23.5 1.1E+02 0.0023 28.0 3.6 46 191-244 93-138 (306)
441 COG3286 Uncharacterized protei 23.5 4.9E+02 0.011 22.6 8.6 50 389-442 92-141 (204)
442 TIGR01149 mtrG N5-methyltetrah 23.5 1.7E+02 0.0038 20.5 3.9 30 413-442 5-34 (70)
443 cd01018 ZntC Metal binding pro 23.4 3.8E+02 0.0082 24.5 7.6 40 192-242 205-244 (266)
444 COG2515 Acd 1-aminocyclopropan 23.3 6.4E+02 0.014 23.8 12.3 44 208-253 245-288 (323)
445 PRK13602 putative ribosomal pr 22.8 2.9E+02 0.0064 20.1 5.4 45 191-246 17-61 (82)
446 cd01393 recA_like RecA is a b 22.6 2.6E+02 0.0056 24.6 6.3 44 203-246 113-168 (226)
447 PRK10886 DnaA initiator-associ 22.4 5.2E+02 0.011 22.5 11.3 17 227-243 125-141 (196)
448 PF00128 Alpha-amylase: Alpha 22.3 73 0.0016 29.5 2.8 25 224-248 51-75 (316)
449 PRK01026 tetrahydromethanopter 22.3 2E+02 0.0044 20.7 4.1 30 413-442 8-37 (77)
450 cd01533 4RHOD_Repeat_2 Member 22.3 2.6E+02 0.0056 21.2 5.4 54 80-141 52-106 (109)
451 PRK04147 N-acetylneuraminate l 22.0 5.2E+02 0.011 24.0 8.4 58 73-137 53-110 (293)
452 PRK06683 hypothetical protein; 21.8 1.8E+02 0.0039 21.3 4.1 40 203-250 26-65 (82)
453 TIGR02403 trehalose_treC alpha 21.5 1.9E+02 0.0041 29.9 5.7 45 204-248 40-98 (543)
454 COG0514 RecQ Superfamily II DN 21.2 2.1E+02 0.0046 29.7 5.8 80 196-296 99-185 (590)
455 COG2159 Predicted metal-depend 21.0 3.5E+02 0.0075 25.3 6.9 52 190-250 115-166 (293)
456 cd01125 repA Hexameric Replica 20.9 2.2E+02 0.0047 25.5 5.4 40 204-243 111-154 (239)
457 cd07571 ALP_N-acyl_transferase 20.8 3.6E+02 0.0077 24.7 6.9 37 207-243 41-77 (270)
458 PF03853 YjeF_N: YjeF-related 20.8 2.6E+02 0.0056 23.6 5.6 64 206-272 100-164 (169)
459 PF13407 Peripla_BP_4: Peripla 20.5 2.6E+02 0.0057 24.9 6.0 40 191-243 46-85 (257)
460 cd01123 Rad51_DMC1_radA Rad51_ 20.2 2E+02 0.0042 25.6 5.0 56 191-248 104-171 (235)
461 PF13113 DUF3970: Protein of u 20.2 1.3E+02 0.0029 20.4 2.7 19 409-431 4-22 (60)
462 COG1212 KdsB CMP-2-keto-3-deox 20.2 3.6E+02 0.0077 24.2 6.1 45 190-237 201-245 (247)
No 1
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=4.1e-83 Score=604.03 Aligned_cols=432 Identities=41% Similarity=0.748 Sum_probs=397.4
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+||||+++...... |.++++++|.|++|.|||+|||.+|++|++++||+||+|.+|+.+|++++.+++. +...+.+..
T Consensus 13 ~whP~t~~~~~~~~-~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~-~~~t~~Pa~ 90 (449)
T COG0161 13 LWHPFTQMRDPLAE-PRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMF-GGFTHEPAI 90 (449)
T ss_pred eecccccccccccc-ceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhh-cccCCchHH
Confidence 69999999988555 9999999999999999999999999999999999999999999999999887654 345777799
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcc-ccCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPA-LHQKFDL 159 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~-~~~~~~~ 159 (447)
+|+++|+++.++.++++|+|++|||+|||.|+|++++|++.+|+++++++|...++|||.+.++++++|... ++..+..
T Consensus 91 ~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ 170 (449)
T COG0161 91 ELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDP 170 (449)
T ss_pred HHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccc
Confidence 999999999865569999999999999999999999999999999999999999999999999999999544 4466677
Q ss_pred CCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCC-CCCccCChhHHHHHHHHHHhcC
Q 013204 160 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGA-GGVIPPPATYFEKVQAVVKKYD 238 (447)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~-~G~~~~~~~~l~~l~~l~~~~g 238 (447)
+.+...+++.|..|+.....+..+.+ ..++++||+++...++++++++|+||+.+. ||+++|++.||++++++|++||
T Consensus 171 ll~~~~~~~~P~~y~~~~~~~~~~~~-~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ 249 (449)
T COG0161 171 LLPEVLHLPAPYAYRRGFFGEGDEEF-AEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYG 249 (449)
T ss_pred cccCceecCCCcccccCCCCCChHHH-HHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcC
Confidence 77778899999888766666777777 788899999999999899999999998766 9999999999999999999999
Q ss_pred CEEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHH
Q 013204 239 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC 318 (447)
Q Consensus 239 ~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~ 318 (447)
++||+|||.|||||+|+.|+++++++.||++|++|+++|||+|+|+++.++++.+.+.... .+.|.|+.||++||++|
T Consensus 250 ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~--~~~f~HG~TYsghPlac 327 (449)
T COG0161 250 ILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGD--AGAFMHGHTYSGNPLAC 327 (449)
T ss_pred cEEEeecceeCCCcCchhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhccc--CCeeccCCccccCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998654 67899999999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhh-ccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHH
Q 013204 319 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK 397 (447)
Q Consensus 319 ~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 397 (447)
++|++.|++++++++.+++++++.+|.+.|+. +.+++.+.++++.|++.++++..+..++.+| ..+....+...+++
T Consensus 328 AaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f--~~~~~~~~~~~~~e 405 (449)
T COG0161 328 AAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPF--EARVGARVRAAALE 405 (449)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccch--hhhHHHHHHHHHHH
Confidence 99999999999999999999999999999998 5778999999999999999999988888777 44567778899999
Q ss_pred cCceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 013204 398 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEER 439 (447)
Q Consensus 398 ~Gi~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 439 (447)
+|++++|.|+.+-++||+++|++||+++++++.+++++..++
T Consensus 406 ~Gl~iRp~g~~i~~~PPliit~~eid~l~~~l~~al~~~~~~ 447 (449)
T COG0161 406 RGLLIRPLGDVIYLMPPLIITREEIDELVDALREALDETLAD 447 (449)
T ss_pred CCeEEeecCCEEEEcCCccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999876543
No 2
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=1.9e-80 Score=615.82 Aligned_cols=447 Identities=90% Similarity=1.429 Sum_probs=395.8
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
|||||++++......|+++++++|+++||.|||+||||++++|+.+|||+||+|++|+.++++++...+.++..++++..
T Consensus 57 ~~~p~~~~~~~~~~~p~~i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~ 136 (504)
T PLN02760 57 MLAPFTAGWQSTDLEPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSL 136 (504)
T ss_pred cccCcccccccccCCCceEEeeeeeEEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHH
Confidence 79999999988777899999999999999999999999999999999999999999999999987655544456889999
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
+++++|.+.+.+.+.++++|++||+|||+.|||++|.|+..+|++++++||.++++|||++.+++++++.+.++..++.+
T Consensus 137 ~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~ 216 (504)
T PLN02760 137 DLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLP 216 (504)
T ss_pred HHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCC
Confidence 99999999875556679999999999999999999999877787778999999999999999999999887776677766
Q ss_pred CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCE
Q 013204 161 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 240 (447)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~ 240 (447)
...+.++++|+.+++..|....+.+...+.++|++++...+++++++||+||+++++|+++|+++||++|+++|++||++
T Consensus 217 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~l 296 (504)
T PLN02760 217 APFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDIL 296 (504)
T ss_pred CCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 66677888888777666666666666667788998876555678999999999999999999999999999999999999
Q ss_pred EEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHH
Q 013204 241 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 320 (447)
Q Consensus 241 li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a 320 (447)
||+|||+|||||+|..|+++++|++||++|+||+++||++|+|++++++++++.+.......+.+.|++||++||++|++
T Consensus 297 LI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aa 376 (504)
T PLN02760 297 FIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAV 376 (504)
T ss_pred EEecchhhCCcccchhhHHHhcCCCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999889999999999999886432223356788999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCc
Q 013204 321 AIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM 400 (447)
Q Consensus 321 a~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 400 (447)
++++|++++++++.+++++++++|++.|+++.+++++.+++|.|+++++++.++.....+++........+.+.|+++|+
T Consensus 377 ala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gv 456 (504)
T PLN02760 377 ALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGM 456 (504)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999999986678999999999999999976554444444333456678889999999
Q ss_pred eEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 013204 401 LVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKELKSQQ 447 (447)
Q Consensus 401 ~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~~~~~~ 447 (447)
++.+.++.+||+||+++|++|||+++++|+++++++++++.++|||+
T Consensus 457 l~~~~g~~lrl~Ppl~it~eeid~~~~~l~~al~~~~~~~~~~~~~~ 503 (504)
T PLN02760 457 LVRVAGDNIMMSPPLIITPEEVDELISIYGKALKATEERVAELKSQK 503 (504)
T ss_pred EEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 99988888999999999999999999999999999999999999985
No 3
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-79 Score=564.40 Aligned_cols=378 Identities=34% Similarity=0.596 Sum_probs=345.0
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
.++|+++++++|+|+||.+||+||||.+++++++|||+||++++++.++++++.+.+.. +.+++..+|++++++..+
T Consensus 22 ~~~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~--~~~~~~~~la~~L~~~s~- 98 (404)
T COG4992 22 GRLPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNL--FYNEPQAELAEKLVELSP- 98 (404)
T ss_pred CcCceeEEeccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccc--cCChHHHHHHHHHHhhCc-
Confidence 55789999999999999999999999999999999999999999999999987665443 478899999999999962
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCc
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
..++|+|+|||+||||+|+|++|.+.. .+++.+||.|.++|||+|++++++++.+-|+++|.+..+.+.++|+-+
T Consensus 99 -~~d~vff~NSGaEA~EaAiKlARk~~~---~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnD- 173 (404)
T COG4992 99 -FADRVFFCNSGAEANEAALKLARKYTG---DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFND- 173 (404)
T ss_pred -cccEEEEcCCcHHHHHHHHHHHHHHcC---CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCC-
Confidence 589999999999999999999998853 245789999999999999999999999999999998888888888854
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCc
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 252 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~ 252 (447)
++++++++. +++++||+||+|++||.++++++||+.++++|++||++||+||||||+||
T Consensus 174 -----------------i~al~~ai~----~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GR 232 (404)
T COG4992 174 -----------------IEALEAAID----EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGR 232 (404)
T ss_pred -----------------HHHHHHHhc----cCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCc
Confidence 478888886 48999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhc
Q 013204 253 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 332 (447)
Q Consensus 253 ~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~ 332 (447)
+|+.|+++++++.|||++++|+|+|| +|+|+++.++.+.+.+. +..|++||.+||++|+++.++|+++.+++
T Consensus 233 TGk~fA~e~~gV~PDI~tlaK~LgGG-~PigA~la~~~~~~~~~-------~G~HgSTfGGNpLacAv~~a~l~~l~~e~ 304 (404)
T COG4992 233 TGKLFAYEHYGVEPDILTLAKALGGG-FPIGAMLATEEIASAFT-------PGDHGSTFGGNPLACAVALAVLEVLLEEG 304 (404)
T ss_pred cchHHHHHHhCCCCCEEEeeccccCC-ccceeeEEchhhhhcCC-------CCcccCCCCcCHHHHHHHHHHHHHHcchh
Confidence 99999999999999999999999999 89999999977677664 55899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEE
Q 013204 333 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIM 410 (447)
Q Consensus 333 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR 410 (447)
+.+++++++++|++.|+++ .+++++.+++|.|+|+++++..+. .+..+.+.|.++|+++-..+ +++|
T Consensus 305 ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~-----------~a~~~~~~~~~~gvL~~~a~~~ViR 373 (404)
T COG4992 305 LLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY-----------RARDIVRALREEGVLVLPAGPNVIR 373 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcc-----------cHHHHHHHHHHCCeEEecCCCCeEE
Confidence 9999999999999999999 678899999999999999998753 14568899999999988765 6799
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 411 MSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 411 ~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
|.||+++++|+|++++++|+++++.+..
T Consensus 374 ~~PpL~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 374 FLPPLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred ecCCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999987643
No 4
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-77 Score=570.72 Aligned_cols=403 Identities=34% Similarity=0.603 Sum_probs=355.0
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
.+|+++++++|+|+||.|||+||||.+++++.++||+||+|++|+.++++++.+.+... .+.++..+++|++.+.++..
T Consensus 37 ~~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~-~~~e~~v~~ae~L~~~~p~~ 115 (447)
T COG0160 37 RFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRD-LYYEPYVELAEKLTALAPGS 115 (447)
T ss_pred cCcceEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCc-ccchhHHHHHHHHHHhCCcc
Confidence 68999999999999999999999999999999999999999999999998865433322 24489999999999998655
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcc-ccCCCCCCCCcceecCCCCc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPA-LHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 172 (447)
..++++|++||+||||+|||+++.+ +++..||.|.++|||.|.+++++++... +...+....+.+.++|+|+.
T Consensus 116 ~~~~~~f~~sGaeA~E~AiKiAr~~------Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~ 189 (447)
T COG0160 116 GLKKVFFGNSGAEAVEAAIKIARAY------TGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNP 189 (447)
T ss_pred cCCeEEecCCcHHHHHHHHHHHHHH------hCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCcc
Confidence 6789999999999999999999988 6789999999999999999999999754 44566766677899999998
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHh--hCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCC
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~--~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~ 250 (447)
++.+..... +.......+.+++.+.. .++..+|++|+||+|++||.++||++||++++++|++||+++|+||||+||
T Consensus 190 yr~p~~~~~-~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~ 268 (447)
T COG0160 190 YRCPFGIGG-EECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGF 268 (447)
T ss_pred ccCcccCch-hhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 886544332 44444556777776554 356789999999999999999999999999999999999999999999999
Q ss_pred CccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh
Q 013204 251 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 330 (447)
Q Consensus 251 g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~ 330 (447)
||+|+.|+++++|+.||++|+||++++| +|+|++++++++++.. ...+.+||.+||++|++++++|+++++
T Consensus 269 GRTG~~fa~E~~gv~PDivt~aK~ig~G-~Pl~avv~r~ei~~~~--------~g~~~~Tf~GNpva~Aaa~AvL~vie~ 339 (447)
T COG0160 269 GRTGKMFAFEHFGVEPDIVTLAKSLGGG-LPLSAVVGRAEIMDWP--------PGGHGGTFGGNPVACAAALAVLDVIEE 339 (447)
T ss_pred CccccchhhhhcCCCCCEEEecccccCC-CceeEEeccHHhcccC--------CcccCCCCCcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 8999999999999833 336778999999999999999999999
Q ss_pred hcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC---
Q 013204 331 RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--- 406 (447)
Q Consensus 331 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g--- 406 (447)
+++.+++.++++++++.|.+| .+++.+.+++|.|+|+++++..+..+..+. ......+..+|+++|+++..+|
T Consensus 340 e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~---~~~~~~i~~~~~~~Glil~~~G~~~ 416 (447)
T COG0160 340 ENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPD---AELAAKIVARAFERGLLLLTCGPHG 416 (447)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCC---HHHHHHHHHHHHHcCCEEeccCCCC
Confidence 999999999999999999999 789999999999999999998765443322 2356779999999999998887
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 407 DNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 407 ~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
+++||.||+++++|++|+++++|+++++++
T Consensus 417 nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 417 NVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred cEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 789999999999999999999999999764
No 5
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=4.2e-76 Score=580.95 Aligned_cols=437 Identities=34% Similarity=0.670 Sum_probs=372.0
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+||||+++.......|+++++++|++|||.|||+||||.+++|+++|||+||+|.+|+.++++++.+.+...+..++...
T Consensus 10 ~w~p~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~ 89 (449)
T PRK07481 10 FWHPMAHPAEMKARPPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAI 89 (449)
T ss_pred ccCCcccccccccCCCceEEeccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHH
Confidence 59999999988766899999999999999999999999999999999999999999999999986554333345789999
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
+++++|++.+++.+.++++|++||+||++.|||++|.++..+|++++.+||.|+++|||++.+++++++.+.++..+...
T Consensus 90 ~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~ 169 (449)
T PRK07481 90 ELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPL 169 (449)
T ss_pred HHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCC
Confidence 99999999874445779999999999999999999999877777788999999999999999999988876666555544
Q ss_pred CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCE
Q 013204 161 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 240 (447)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~ 240 (447)
.+.+.+++.|+.++.++...+.+.+...+.+.+|+.+....++++++||+||+++++|.++|+++||++|+++|++||++
T Consensus 170 ~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~l 249 (449)
T PRK07481 170 LPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGIL 249 (449)
T ss_pred CCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCE
Confidence 45556666665444333222345555566677888886555678999999999999999999999999999999999999
Q ss_pred EEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHH
Q 013204 241 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 320 (447)
Q Consensus 241 li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a 320 (447)
||+|||+|||||+|..|+++++++.||++|+||+++||++|+|++++++++++.+.......+.+.|++||++||++|++
T Consensus 250 lI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aa 329 (449)
T PRK07481 250 LIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAA 329 (449)
T ss_pred EEEeehhhCcCcCchhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999889999999999999886432112345788999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcC
Q 013204 321 AIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 399 (447)
Q Consensus 321 a~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 399 (447)
++++|++++++++.++++++++++++.|+++ .+++++.+++|.|+++++++..+.....++.........+...|+++|
T Consensus 330 a~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~G 409 (449)
T PRK07481 330 ALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENG 409 (449)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999998 568999999999999999997543222222211224566888899999
Q ss_pred ceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 400 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 400 i~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
+++.+.++.+|++||+++|++|||+++++|++++++++
T Consensus 410 vl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 410 VLVRPSGTKIILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred eEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 99998888899999999999999999999999997653
No 6
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=6.9e-76 Score=580.62 Aligned_cols=438 Identities=42% Similarity=0.804 Sum_probs=375.2
Q ss_pred CCCCCCcCccCCC--CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChH
Q 013204 1 MLAPFTAGWQSTD--VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKP 78 (447)
Q Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~ 78 (447)
+|+|++++..... ..|+++++++|++|||.|||+||||.+++|+++|||+||+|.+|+.++++++.+.+......+++
T Consensus 16 ~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~ 95 (461)
T PRK07482 16 FFHPSTHLGDHARGELPGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEA 95 (461)
T ss_pred ccCCcccccccccccCCCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHH
Confidence 5999987754432 35899999999999999999999999999999999999999999999999875444333457899
Q ss_pred HHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCC
Q 013204 79 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD 158 (447)
Q Consensus 79 ~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 158 (447)
..+++++|++..+ .+.++++|++|||||++.|||++|.++..+|.+++++||.|+++|||++.+++++++.+.++..++
T Consensus 96 ~~~lAe~L~~~~p-~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~ 174 (461)
T PRK07482 96 SITLSKRIIDRAP-AGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFD 174 (461)
T ss_pred HHHHHHHHHHhCC-CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccC
Confidence 9999999999863 457899999999999999999999998777777889999999999999999999998877777777
Q ss_pred CCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcC
Q 013204 159 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 238 (447)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g 238 (447)
.+...+.++++|..++.+......+.+...+++.+++++....++++++||+||+++++|+++|+++|+++|+++|++||
T Consensus 175 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~g 254 (461)
T PRK07482 175 LPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYD 254 (461)
T ss_pred CCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhC
Confidence 77666777777765554333444556666778889998865556789999999999999999999999999999999999
Q ss_pred CEEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHH
Q 013204 239 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC 318 (447)
Q Consensus 239 ~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~ 318 (447)
++||+|||+|||||+|+.|+++++|+.||++|+||+|+||++|+|++++++++++.+.......+.+.|++||++||++|
T Consensus 255 iLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~ 334 (461)
T PRK07482 255 ILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICA 334 (461)
T ss_pred CEEEEeccccCCCcCcchhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHH
Confidence 99999999999999999999999999999999999999997799999999999988864322234567889999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHH
Q 013204 319 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK 397 (447)
Q Consensus 319 ~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 397 (447)
++++++|++++++++.++++++++++++.|+++ .+++.+.+++|.|+++++++..+.....++.........+...|++
T Consensus 335 Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (461)
T PRK07482 335 AAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALE 414 (461)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999988 7789999999999999999975433333333222235668889999
Q ss_pred cCceEEee--CCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 013204 398 HGMLVRVS--GDNIMMSPPFIMSPEEVDELISKYGKALKATEER 439 (447)
Q Consensus 398 ~Gi~~~~~--g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 439 (447)
+|+++.+. ++.+|+.||+++|++||++++++|+++++++.++
T Consensus 415 ~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~~~ 458 (461)
T PRK07482 415 RGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVDEVLGR 458 (461)
T ss_pred CCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99998653 6789999999999999999999999999887443
No 7
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=3e-75 Score=575.81 Aligned_cols=437 Identities=32% Similarity=0.621 Sum_probs=368.9
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+|+|++++.......|+++++++|+++||.|||+||||.+++|+.++||+||+|.+|+.++++++.+....+...+++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~ 93 (459)
T PRK05965 14 LIHPVASYRGHEARGVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAI 93 (459)
T ss_pred cccccccccccccCCCceEEeeeEeEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHH
Confidence 58898877433234689999999999999999999999999999999999999999999999986554333345788999
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
+|++++++.++ .+.++++|++||+|||+.|||++|.|+..+|++++.+||.++++|||++.++++.++.+.++..++.+
T Consensus 94 ~lae~L~~~~p-~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~ 172 (459)
T PRK05965 94 RLAAKLAERAP-GSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLP 172 (459)
T ss_pred HHHHHHHhhCC-CCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCC
Confidence 99999999873 45789999999999999999999999877787788999999999999999999988877666666655
Q ss_pred CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCE
Q 013204 161 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 240 (447)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~ 240 (447)
......+++|..++.+.. .+.+.....+++++++.+....++++++||+||+++++|+++|+++||++|+++|++||++
T Consensus 173 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gil 251 (459)
T PRK05965 173 LPWQHKIPSPYPYRNPVG-DDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGIL 251 (459)
T ss_pred CCCCEEcCCCcccccccC-CChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 444556666654443221 2334455666788888887655578999999999999999999999999999999999999
Q ss_pred EEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHH
Q 013204 241 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 320 (447)
Q Consensus 241 li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a 320 (447)
||+|||+|||||+|+.|+++++|+.||++|+||+|+||++|+|++++++++++.+.......+.+.|++||++||++|++
T Consensus 252 lI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aa 331 (459)
T PRK05965 252 FVADEVITGFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAV 331 (459)
T ss_pred EEEechhccCccCchhhhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999779999999999999886422112245688999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCc
Q 013204 321 AIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM 400 (447)
Q Consensus 321 a~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 400 (447)
++++|++++++++.+++++++++|++.|+++.+++.+.+++|.|+++++++..+..+..++.........+.+.++++|+
T Consensus 332 a~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gl 411 (459)
T PRK05965 332 GLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGL 411 (459)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCe
Confidence 99999999999999999999999999999986688999999999999999976443333322222345668889999999
Q ss_pred eEEeeC-CEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 013204 401 LVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKATEER 439 (447)
Q Consensus 401 ~~~~~g-~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 439 (447)
++.+.+ +.+|+.||+++|++||++++++|+++++++..+
T Consensus 412 l~~~~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~~~ 451 (459)
T PRK05965 412 VFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLDDVLAD 451 (459)
T ss_pred EEEecCCcEEEEECCCcCCHHHHHHHHHHHHHHHHHHhcC
Confidence 999876 569999999999999999999999999887543
No 8
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=4.4e-74 Score=567.60 Aligned_cols=437 Identities=53% Similarity=0.965 Sum_probs=375.7
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+|+|+..........|+++++++|+++||.|||+||||.+++++++|||+||+|.+|+.++++++.+.+......++...
T Consensus 16 ~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~ 95 (460)
T PRK06105 16 HLHPYTNARRHEEEGPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVI 95 (460)
T ss_pred cccCCcccccccccCCceEEeeeEEEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHH
Confidence 48888765332334689999999999999999999999999999999999999999999999986654333234788899
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
+++++|++.++ .+.++++|++||+|||+.|||+++.++..++.+++.+||.++++|||++.+++++++.+.++..++.+
T Consensus 96 ~lae~L~~~~p-~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~ 174 (460)
T PRK06105 96 DLAEKLVAMAP-VPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLP 174 (460)
T ss_pred HHHHHHHHhCC-CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCC
Confidence 99999999973 45679999999999999999999988877776778999999999999999999988876666677766
Q ss_pred CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCE
Q 013204 161 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 240 (447)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~ 240 (447)
.+.+.++++|+.+++..+....+.+...+++++|+++...+++++++||+||+++++|+++++++||++|+++|++||++
T Consensus 175 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~l 254 (460)
T PRK06105 175 LDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDIL 254 (460)
T ss_pred CCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCe
Confidence 66777888887766655555556666777889999887655678999999999999999999999999999999999999
Q ss_pred EEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHH
Q 013204 241 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 320 (447)
Q Consensus 241 li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a 320 (447)
+|+|||+|||||+|+.|+++++++.||++++||+|+||++|+|++++++++++.+.......+.+.|++|+.+||++|++
T Consensus 255 lI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aa 334 (460)
T PRK06105 255 LVADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAV 334 (460)
T ss_pred EEEeccccCCCcCchhhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999789999999999999886432223345688999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCc
Q 013204 321 AIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM 400 (447)
Q Consensus 321 a~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 400 (447)
++++|++++++++.+++++++++|++.|+++.+++.+.+++|.|+++++++..+..+..++.........+...++++|+
T Consensus 335 a~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gv 414 (460)
T PRK06105 335 ALENLAIIEERDLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGV 414 (460)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCe
Confidence 99999999999999999999999999999996688999999999999999975443333332222234568888999999
Q ss_pred eEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 401 LVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 401 ~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
++.+.++.+||+||+++|++||++++++|++++++++.
T Consensus 415 l~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 415 ISRAMGDTLAFCPPLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred EEEecCCEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 99988889999999999999999999999999988755
No 9
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-73 Score=562.54 Aligned_cols=436 Identities=36% Similarity=0.730 Sum_probs=370.2
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+|+||+++......+|+++++++|+++||.|||+||||.+++++.++||+||+|.+|+.++++++.+.+.+....+++..
T Consensus 19 ~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~ 98 (466)
T PRK07036 19 LLHPWHDFSSLGKEGSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAA 98 (466)
T ss_pred cccCccCccccccCCCceEEeCceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHH
Confidence 69999888666556799999999999999999999999999999999999999999999999886443332125788999
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
++++++++.. +.+.++++|++||+||++.|||+++.++..+|.+++.+||.|+++|||++.++++.++.+.++..+...
T Consensus 99 ~lae~L~~~~-p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~ 177 (466)
T PRK07036 99 ELAAKLAELA-PGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYA 177 (466)
T ss_pred HHHHHHHHhC-CCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCC
Confidence 9999999986 345679999999999999999999999877777778999999999999999999999877766666555
Q ss_pred CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCE
Q 013204 161 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 240 (447)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~ 240 (447)
...+.+++.|+.++.+. +...+.+...+++++++.+....++++++||+||+++++|+++|+++|+++|+++|++||++
T Consensus 178 ~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~l 256 (466)
T PRK07036 178 SDLVHHLSSPNPYRRPA-GMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDIL 256 (466)
T ss_pred CCCcEEecCCccccccc-CCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 55556677766544322 22334555556677888776656688999999999999999999999999999999999999
Q ss_pred EEEehhhcCCCccccccccc-cCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHH
Q 013204 241 FIADEVICAFGRLGTMFGCD-KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 319 (447)
Q Consensus 241 li~DEv~~g~g~~g~~~~~~-~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~ 319 (447)
+|+|||+|||||+|+.|+++ ++|+.||++++||+++||++|+|++++++++++.+.........+.+++||++||++|+
T Consensus 257 lI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~a 336 (466)
T PRK07036 257 YISDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACA 336 (466)
T ss_pred EEEeechhCCCcCchhhhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHH
Confidence 99999999999999988888 78999999999999999978999999999999988632111113568889999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcC
Q 013204 320 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 399 (447)
Q Consensus 320 aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 399 (447)
+++++|++++++++.+++++++++|++.|+++.+++.+.+++|.|+++++++..+.....++.........+.+.|+++|
T Consensus 337 aa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 416 (466)
T PRK07036 337 AALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERG 416 (466)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCC
Confidence 99999999998999999999999999999988678899999999999999997654333333322234566888999999
Q ss_pred ceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 400 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 400 i~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
+++.+.++.+|++||+++|++|||+++++|+++++++.+
T Consensus 417 vl~~~~~~~~~l~Ppl~it~~~id~~~~~l~~al~~~~~ 455 (466)
T PRK07036 417 LLVRPLEHLCVLSPPLIITRAQIDEIVAILRAAIEETAD 455 (466)
T ss_pred cEEeecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 999988888999999999999999999999999988755
No 10
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-74 Score=519.10 Aligned_cols=408 Identities=41% Similarity=0.704 Sum_probs=369.7
Q ss_pred CCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHH
Q 013204 4 PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLA 83 (447)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (447)
+++..|-.-...|++|.+++|+|++|.+|++|||+.+|.++.++||+||+|.+++.+++..+ +|..+.+.+++..+++
T Consensus 21 ~ls~~~~~~~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l--~H~t~~~~~~pi~~~A 98 (442)
T KOG1404|consen 21 FLSPGLTSYYKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKL--YHTTSGYLNPPIHDLA 98 (442)
T ss_pred cCCcceeccccCCceEEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhh--EEeeccccCCcHHHHH
Confidence 44445555566799999999999999999999999999999999999999999999999665 4555567889999999
Q ss_pred HHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCc
Q 013204 84 KELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPF 163 (447)
Q Consensus 84 ~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 163 (447)
++|.+.+ +.+++.++|+|||+|||+.|++++|.| ++..++|.+.++|||.+..++++++...++..+......
T Consensus 99 e~L~s~~-P~~l~~vfF~nsGsEANelal~mar~Y------t~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~ 171 (442)
T KOG1404|consen 99 EALVSKL-PGDLKVVFFVNSGSEANELALKMARLY------TGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASG 171 (442)
T ss_pred HHHHHhC-CCCceEEEEecCCchHHHHHHHHHHHh------cCCceEEEeeccccCCchhhcccccCCcccccCCCCCCc
Confidence 9999998 567889999999999999999999999 567899999999999999999999998888777777678
Q ss_pred ceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEE
Q 013204 164 VLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 243 (447)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~ 243 (447)
..+..+|++++...++.+.+++.....+++++.+....+.++|++|+|++++.||++.++++||+++.++||++|.++|.
T Consensus 172 ~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~Ia 251 (442)
T KOG1404|consen 172 VHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIA 251 (442)
T ss_pred ccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEe
Confidence 89999999999999998888899999999999998888889999999999999999999999999999999999999999
Q ss_pred ehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHH
Q 013204 244 DEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIE 323 (447)
Q Consensus 244 DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a 323 (447)
|||||||||+|..|.++..++.|||+|++|++++| .|+|+++.++++++.+... ..+..||.+||++|+++++
T Consensus 252 DEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGnG-~Pl~AVvtt~EIa~v~~~~------~~~fnTyggnP~a~avg~a 324 (442)
T KOG1404|consen 252 DEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGNG-FPLGAVVTTPEIADVLNQK------SSHFNTYGGNPVACAVGLA 324 (442)
T ss_pred hhhhhccccccccccccccCCCccHHHHHhhccCC-CcceeeecCHHHHHHHHhc------cccccccCCCchhHHHHHH
Confidence 99999999999999999999999999999999999 8999999999999999753 2377899999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceE
Q 013204 324 ALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV 402 (447)
Q Consensus 324 ~l~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~ 402 (447)
+|++++++++.++..+.+.+|++.|.++ .+++++++++|.|+|+++++.++.. .+++........+.+.|+++|+++
T Consensus 325 VL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~--~~~pp~~~~~~~i~~~cke~Gvlv 402 (442)
T KOG1404|consen 325 VLKVIKEENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKS--EPKPPATAEGAVIGEQCKELGVLV 402 (442)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccC--CCCCcchHHHHHHHHHHHHhCeee
Confidence 9999999999999999999999999999 7799999999999999999988763 334444445677889999999999
Q ss_pred Eee---CCEEEEecCCCCCHHHHHHHHHHH
Q 013204 403 RVS---GDNIMMSPPFIMSPEEVDELISKY 429 (447)
Q Consensus 403 ~~~---g~~iR~~~~~~~t~e~i~~~~~~l 429 (447)
.-+ |+++||+||+++|+|||+.+++.+
T Consensus 403 g~g~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 403 GKGGIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred ecccccceEEEecCCeeccHHHHHHHHHHH
Confidence 654 478999999999999997777765
No 11
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=3.1e-73 Score=560.35 Aligned_cols=433 Identities=43% Similarity=0.789 Sum_probs=365.7
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+|+|++++.......|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.++++++.+....+...+++..
T Consensus 18 ~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~ 97 (456)
T PRK07480 18 HLHPFSDMKALNEKGSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAI 97 (456)
T ss_pred cccCcccccccccCCCceEEeceeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHH
Confidence 58888777444334689999999999999999999999999999999999999999999999987554333345789999
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
++++++++.++ .+.++++|++||+||++.|||++|.++..+|++++.+||.+.++|||++.+++++++.+.++..++.+
T Consensus 98 ~lae~L~~~~p-~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~ 176 (456)
T PRK07480 98 ELAAKLAEVAP-PGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLP 176 (456)
T ss_pred HHHHHHHHhCC-CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCC
Confidence 99999999973 45679999999999999999999999877787778999999999999999999988876555555544
Q ss_pred CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCE
Q 013204 161 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 240 (447)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~ 240 (447)
.+.+.++++|..++... ..+.+.+...+++.+++.+....++++++||+||+++++|+++|+++||++|+++|++||++
T Consensus 177 ~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~l 255 (456)
T PRK07480 177 IPGIVHIDQPYWFGEGG-DMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDIL 255 (456)
T ss_pred CCCCeecCCCccccccc-CCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 45566677665544221 22344555555678877666555678999999999999999999999999999999999999
Q ss_pred EEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHH
Q 013204 241 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 320 (447)
Q Consensus 241 li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a 320 (447)
||+|||+|||||+|..|+++++|++||++++||+++||++|+|++++++++++.+... .+.+.+++||++||++|++
T Consensus 256 lI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~---~~~~~~~~T~~gnpl~~Aa 332 (456)
T PRK07480 256 LVADEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEE---GGEFNHGFTYSGHPVAAAV 332 (456)
T ss_pred EEEechhhCCCcCcchhhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhcC---CCCcccCCCCCcCHHHHHH
Confidence 9999999999999999999999999999999999999978999999999999988421 1245688999999999999
Q ss_pred HHHHHHHHhhhcHHHHH-HHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcC
Q 013204 321 AIEALKIYKERNIVEQV-NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 399 (447)
Q Consensus 321 a~a~l~~~~~~~~~~~~-~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 399 (447)
++++|++++++++.+++ ++++++|++.|+++.+++.+.+++|.|+++++++..+.....++.........+.+.|+++|
T Consensus 333 a~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 412 (456)
T PRK07480 333 ALANLRILRDEGIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANG 412 (456)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCC
Confidence 99999999999999999 59999999999988668889999999999999997543333333221123456778899999
Q ss_pred ceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 400 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 400 i~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
+++.+.++.+||+||+++|++|||+++++|++++.++++
T Consensus 413 ll~~~~~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 413 LIMRAVGDRMIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred cEEeecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999887888999999999999999999999999998766
No 12
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=9.7e-73 Score=557.08 Aligned_cols=432 Identities=25% Similarity=0.513 Sum_probs=365.3
Q ss_pred CCCCCCcCccCCCCC-CeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHH
Q 013204 1 MLAPFTAGWQSTDVH-PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS 79 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~-~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~ 79 (447)
+|+||+++......+ |+++++++|+++||.|||+||||.+++|++++||+||+|.+|+.++++++...+. ....+++.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~-~~~~~~~~ 109 (472)
T PRK08742 31 LWHPCTQMREHPHTLPLVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVML-AGFTHEPA 109 (472)
T ss_pred cccCCcccccccccCCCeeEEecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccc-cccCCHHH
Confidence 599998876543333 4779999999999999999999999999999999999999999999987544332 24578889
Q ss_pred HHHHHHHHHhcCcC----CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccC
Q 013204 80 LDLAKELLEMFTAS----KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 155 (447)
Q Consensus 80 ~~l~~~l~~~~~~~----~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 155 (447)
.++++++++.++.. +.++++|++||+|||++|||++|.++..+|.+++.+||.|+++|||++.++++.++.+.++.
T Consensus 110 ~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~ 189 (472)
T PRK08742 110 VQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRR 189 (472)
T ss_pred HHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCccccc
Confidence 99999999987431 46799999999999999999999998777777789999999999999999999998776666
Q ss_pred CCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEcc-ccCCCCCccCChhHHHHHHHHH
Q 013204 156 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~ep-v~~~~G~~~~~~~~l~~l~~l~ 234 (447)
.+....+.+.++++|+.++... +...+.+...+++.+++.+.. .++++++||+|| +++++|+++|+++||++|+++|
T Consensus 190 ~~~p~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~l~~~~~~-~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc 267 (472)
T PRK08742 190 VYAPLLLESLFAPSPDAYLAEP-GQSAEDYALQAADALQALFEQ-SPGEICALILEPRLQCAGGMRMHHPAYLRRARELC 267 (472)
T ss_pred ccCCCCCCCEEeCCCCcccccc-CCCHHHHHHHHHHHHHHHHHh-CCCceEEEEEccccccCCCcccCCHHHHHHHHHHH
Confidence 6655555566777776554322 333344555667888888763 456899999999 6999999999999999999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCc
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 314 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 314 (447)
++||++||+|||+|||||+|..|+++++|+.||++++||+|+||++|+|++++++++++.+.... ..+.+.|++||++|
T Consensus 268 ~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~-~~~~~~h~~T~~gn 346 (472)
T PRK08742 268 DAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDS-RERAFLHSHSYTGN 346 (472)
T ss_pred HHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccC-ccCccCcCCCCCcc
Confidence 99999999999999999999999999999999999999999999779999999999998875321 12355688999999
Q ss_pred HHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHH
Q 013204 315 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ 394 (447)
Q Consensus 315 ~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (447)
|++|++++++|++++++++.++++++++++++.++.+.+++.+.+++|.|+++++++..+..+..++.........+.+.
T Consensus 347 pl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~ 426 (472)
T PRK08742 347 PLACAAALATLDIFADDDVIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRA 426 (472)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHH
Confidence 99999999999999999999999999999998888776688999999999999999976543333333222234567788
Q ss_pred HHHcCceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 395 CEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 395 l~~~Gi~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
++++|+++.+.|++|||.||+++|++||++++++|+++++++
T Consensus 427 ~~~~Gll~~~~g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 427 ALARGVVLRPLGDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred HHHCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999988999999999999999999999999999875
No 13
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.3e-72 Score=556.77 Aligned_cols=432 Identities=27% Similarity=0.554 Sum_probs=366.8
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+|+|++.........|+++++++|+++||.|||+||||.+++|+.+|||+||+|.+|+.++++++.+.+. ....+++..
T Consensus 15 ~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~-~~~~~~~~~ 93 (466)
T PRK07030 15 LWHPCTQMKDHEQLPLIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVIL-AGFSHEPVI 93 (466)
T ss_pred cccccccccccccCCCceEEeeeccEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccc-cccCCHHHH
Confidence 5888876643322235789999999999999999999999999999999999999999999988654332 245788999
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
++++++++..+ .+.++++|++||+|||+.|||+++.++..+|.+++.+||.|.++|||++.++++.++.+.++..+...
T Consensus 94 ~lae~L~~~~p-~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~ 172 (466)
T PRK07030 94 ELSERLVKITP-PGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPL 172 (466)
T ss_pred HHHHHHHHhCC-CCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCcc
Confidence 99999999863 45679999999999999999999998777787788999999999999999999998877666666555
Q ss_pred CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEcc-ccCCCCCccCChhHHHHHHHHHHhcCC
Q 013204 161 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDI 239 (447)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~ep-v~~~~G~~~~~~~~l~~l~~l~~~~g~ 239 (447)
...+.++++|+.++... +...+.+..++++++++.+.. .++++++||+|| +++++|.++|+++|+++|+++|++||+
T Consensus 173 ~~~~~~~p~~~~~~~~~-~~~~~~~~~~~l~~le~~~~~-~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~ 250 (466)
T PRK07030 173 LLDTIKVPSPDCYLRPE-GMSWEEHSRRMFAHMEQTLAE-HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGV 250 (466)
T ss_pred CCCCEEcCCCCcccccc-CCCHHHHHHHHHHHHHHHHHh-CCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCC
Confidence 45566777776554332 233455667778888888874 457899999999 799999999999999999999999999
Q ss_pred EEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHH
Q 013204 240 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 319 (447)
Q Consensus 240 ~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~ 319 (447)
++|+|||+|||||+|..|+++++++.||++++||+|+||++|+|++++++++++.+.......+.+.|++||++||++|+
T Consensus 251 llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~a 330 (466)
T PRK07030 251 HLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACA 330 (466)
T ss_pred EEEEeehhhCcCccccchHHHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999977999999999999988532222234578899999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcC
Q 013204 320 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 399 (447)
Q Consensus 320 aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 399 (447)
+++++|++++++++.++++++++++++.|+++.+++.+.+++|.|+++++++..+.....++.........+.+.|+++|
T Consensus 331 aa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~G 410 (466)
T PRK07030 331 AALATLDIFEQDNVIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERG 410 (466)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999998667889999999999999997644333333222223356888999999
Q ss_pred ceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 400 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 400 i~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
+++.+.++.+||.||+++|++||++++++|+++++++
T Consensus 411 vl~~~~g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 411 ALLRPLGSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred eEEEecCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 9999888899999999999999999999999999987
No 14
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4.3e-72 Score=551.80 Aligned_cols=425 Identities=24% Similarity=0.489 Sum_probs=361.6
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+|+|+++........|+++++++|+++||.|||+||||.+++|+.+|||+||+|.+|+.++++++.+... ....+++..
T Consensus 22 ~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-~~~~~~~~~ 100 (453)
T PRK06943 22 VWHPCTQMKHHERLPLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAML-AGCTHEPAI 100 (453)
T ss_pred cccCCcCccccccCCCceEEecccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccc-cccCCHHHH
Confidence 5999987743332468999999999999999999999999999999999999999999999988654322 245788999
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
++++++++..+ ...++++|++||+||++.|||+++.++..++.+++.+||.|+++|||++.+++++++...++..++..
T Consensus 101 ~lAe~L~~~~p-~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~ 179 (453)
T PRK06943 101 ELAERLAALTG-GTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPL 179 (453)
T ss_pred HHHHHHHHhCC-CCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccC
Confidence 99999999863 34579999999999999999999988776777788999999999999999999999987777766655
Q ss_pred CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEcc-ccCCCCCccCChhHHHHHHHHHHhcCC
Q 013204 161 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDI 239 (447)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~ep-v~~~~G~~~~~~~~l~~l~~l~~~~g~ 239 (447)
......+++|+..... .....+.+..++++++++++.. +++++++||+|| +++++|+++|+++||++|+++|++||+
T Consensus 180 ~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~l~~~l~~-~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gi 257 (453)
T PRK06943 180 IRHAHVVASPDARGAR-PGETAADVAARALADVRRLFAE-RAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGV 257 (453)
T ss_pred CCCCEEECCCCccccc-cCCCHHHHHHHHHHHHHHHHHh-CCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCC
Confidence 5555667776543322 2223345556777888888864 457899999999 599999999999999999999999999
Q ss_pred EEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHH
Q 013204 240 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 319 (447)
Q Consensus 240 ~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~ 319 (447)
+||+|||+|||||+|..|+++++|+.||++|+||+|+||++|+|++++++++++.+.... ..+.+.+++||++||++|+
T Consensus 258 llI~DEV~TG~GRtG~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~-~~~~~~~~~T~~gnpl~~a 336 (453)
T PRK06943 258 HLIADEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDD-VTRGFLHSHSYTGNPLACR 336 (453)
T ss_pred EEEeechhhCCCCCcchhHHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccC-ccCCccCCCCCCCCHHHHH
Confidence 999999999999999999999999999999999999999779999999999998885321 1123568899999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcC
Q 013204 320 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 399 (447)
Q Consensus 320 aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 399 (447)
+++++|++++++++.+++++++++|++.|+++.+++.+.+++|.|+++++++..+..+. ......+.+.++++|
T Consensus 337 aa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~~~~~~~------~~~~~~i~~~~~~~G 410 (453)
T PRK06943 337 AALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVALDGDAA------RTFSRRFFEAALERE 410 (453)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEccCCCcc------hHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999998557788899999999999997432111 113556888999999
Q ss_pred ceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 400 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 400 i~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
+++.+.++.+||+||+++|++||++++++|+++++++
T Consensus 411 ll~~~~g~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 411 LLLRPIGTTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred cEEEecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 9999888889999999999999999999999999876
No 15
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=1e-71 Score=550.72 Aligned_cols=433 Identities=36% Similarity=0.663 Sum_probs=360.8
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+|+||+++.......|+++++++|+++||.|||+||||.+++++.+|||+||+|.+|+.++++++.+.+......+++..
T Consensus 22 ~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~ 101 (460)
T PRK12403 22 HIHAFLDQKALNAEGPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVI 101 (460)
T ss_pred cccccccccccccCCCceEEeceeeEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHH
Confidence 48999877433335689999999999999999999999999999999999999999999999986654433345788999
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
++++++++.++ .+.++++|++||+|||+.|||+++.++..+|++++..|+.+.++|||++.+++++++...++. ....
T Consensus 102 ~lae~L~~~~p-~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~-~~~~ 179 (460)
T PRK12403 102 ELSELLFSLLP-GHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHE-MGGL 179 (460)
T ss_pred HHHHHHHHhCC-CCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccc-cCCC
Confidence 99999999973 346799999999999999999999987666766678889999999999999999988665443 2323
Q ss_pred CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCE
Q 013204 161 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 240 (447)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~ 240 (447)
.+.+.++++|..++.+. ....+.+...+++++++.+.+.+++++++||+||+++++|++.|+++||++|+++|++||++
T Consensus 180 ~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~l 258 (460)
T PRK12403 180 IPDVAHIDEPYWYANGG-ELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVL 258 (460)
T ss_pred CCCCEEeCCCccccccc-CCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 34456677665543221 11234556666678877776555578999999999999999999999999999999999999
Q ss_pred EEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHH
Q 013204 241 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 320 (447)
Q Consensus 241 li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a 320 (447)
||+|||++||||+|..|+++++|++||++|+||+|+||++|+|++++++++++.+... .+.+.+++||++||++|++
T Consensus 259 LI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~~---~~~~~~~~T~~gnPl~~Aa 335 (460)
T PRK12403 259 LCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQ---GGVFAHGLTYSGHPVAAAV 335 (460)
T ss_pred EEEeccccCCCcCchhhhhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhcC---CCccccCCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999977999999999999888532 1245688899999999999
Q ss_pred HHHHHHHHhhhcHHHHHH-HHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHc
Q 013204 321 AIEALKIYKERNIVEQVN-KIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH 398 (447)
Q Consensus 321 a~a~l~~~~~~~~~~~~~-~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 398 (447)
++++|++++++++.++++ ++++++++.|+++ .+++++.+++|.|+++++++..+.....++.........+...++++
T Consensus 336 ala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (460)
T PRK12403 336 AIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEE 415 (460)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhC
Confidence 999999999888999996 9999999999887 67899999999999999999754333332222112234466778999
Q ss_pred CceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 013204 399 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEER 439 (447)
Q Consensus 399 Gi~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 439 (447)
|+++.+.++.+|++||+++|++||++++++|+++++++.++
T Consensus 416 Gll~~~~~~~~~l~Ppl~it~~eid~~~~~l~~al~~~~~~ 456 (460)
T PRK12403 416 GVIIRSTLGRMIMAPALVAGRAEIDELVDKTRIAVDRTARE 456 (460)
T ss_pred CEEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99998877789999999999999999999999999988654
No 16
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=6.6e-72 Score=552.12 Aligned_cols=433 Identities=31% Similarity=0.585 Sum_probs=365.7
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
.|+|++++.......|+++++++|++|||.|||+||||.+++|+++|||+||+|.+|+.++++++.+.+. ....+++..
T Consensus 24 ~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~-~~~~~~~~~ 102 (460)
T PRK06916 24 VWHPFTQMKDYLEEDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTL-LGLANVPSI 102 (460)
T ss_pred cccccccccccccCCCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccc-cccCCHHHH
Confidence 4888876532223569999999999999999999999999999999999999999999999998654332 245788999
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
+++++|++.++ .+.++++|++||+|||+.|||+++.++..+|.+++.+||.|+++|||++.+++++++.+.++..+...
T Consensus 103 ~lae~L~~~~p-~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~ 181 (460)
T PRK06916 103 LLAEKLIEVVP-EGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSL 181 (460)
T ss_pred HHHHHHHHhCC-CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCC
Confidence 99999999873 45679999999999999999999998877777888999999999999999999999877766666554
Q ss_pred CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEcc-ccCCCCCccCChhHHHHHHHHHHhcCC
Q 013204 161 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDI 239 (447)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~ep-v~~~~G~~~~~~~~l~~l~~l~~~~g~ 239 (447)
......+++|+.++.+.. .+.+.+...+++++++.+.. .++++++||+|| +++++|+++|+++||++|+++|++||+
T Consensus 182 ~~~~~~~p~p~~~~~~~~-~~~~~~~~~~~~~l~~~l~~-~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~ 259 (460)
T PRK06916 182 LFEAIKMPYPYTYRSPYG-NDKAEIVKKHLEELEELLKE-KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNV 259 (460)
T ss_pred CCCCEEeCCCcccccccC-CChHHHHHHHHHHHHHHHHh-CCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 455566777765443221 23345556677888888864 457899999999 699999999999999999999999999
Q ss_pred EEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHH
Q 013204 240 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 319 (447)
Q Consensus 240 ~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~ 319 (447)
++|+|||++||||+|+.|+++++++.||++++||+|+||++|+|++++++++++.+.......+.+.+++||++||++|+
T Consensus 260 llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~a 339 (460)
T PRK06916 260 LFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCA 339 (460)
T ss_pred EEEeechhhCCCcCchhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999977999999999999887532111234568889999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcC
Q 013204 320 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 399 (447)
Q Consensus 320 aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 399 (447)
+++++|++++++++.++++++++++++.|+++.+++.+.+++|.|+++++++.++.....++.........+.+.|+++|
T Consensus 340 aa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~G 419 (460)
T PRK06916 340 VALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELG 419 (460)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999557888999999999999997654433333222223456888999999
Q ss_pred ceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 400 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 400 i~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
+++.+.++.+||.||+++|++||++++++|+++++++.
T Consensus 420 vl~~~~g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 420 MLTRPLGNTIVFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred eEEEecCCEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 99998888999999999999999999999999998753
No 17
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-71 Score=546.91 Aligned_cols=421 Identities=35% Similarity=0.663 Sum_probs=355.7
Q ss_pred CCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC
Q 013204 12 TDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT 91 (447)
Q Consensus 12 ~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (447)
...+|+++++++|++|||.|||+||||.+++|+++|||+||+|.+++.++++++.+.+.. ...++...+++++|++..+
T Consensus 9 ~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p 87 (443)
T PRK07483 9 PRATLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTS-FFTTEPAEALADRLVAAAP 87 (443)
T ss_pred ccCCCceEEeceEEEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCcccc-ccCCHHHHHHHHHHHHhCC
Confidence 344799999999999999999999999999999999999999999999999986543322 2467889999999999863
Q ss_pred cCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCC
Q 013204 92 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 171 (447)
Q Consensus 92 ~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (447)
.+.++++|++||+||++.|||++|.++..+|++++.+||.|+++|||++.++++.++.+.++..+....+.+.+++.+.
T Consensus 88 -~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~ 166 (443)
T PRK07483 88 -AGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCY 166 (443)
T ss_pred -CCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCc
Confidence 4567999999999999999999999987777778899999999999999999999987665555544444455666554
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccC-CCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCC
Q 013204 172 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIG-AGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250 (447)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~-~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~ 250 (447)
.++........+.+...+++++++.+....++++++||+||+++ .+|.++|+++||++|+++|++||+++|+|||+|||
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGf 246 (443)
T PRK07483 167 AYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGM 246 (443)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCc
Confidence 44432223344556666678888877655567899999999998 57999999999999999999999999999999999
Q ss_pred CccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh
Q 013204 251 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 330 (447)
Q Consensus 251 g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~ 330 (447)
||+|+.|++++++++||++|+||+++||+.|+|++++++++++.+... .+.+.|++||++||++|++++++|+++++
T Consensus 247 GRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~---~~~~~h~~T~~gnpl~~aaa~a~l~~i~~ 323 (443)
T PRK07483 247 GRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADG---SGFFQHGHTYLGHATACAAALAVQRVIAE 323 (443)
T ss_pred ccCcHHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhcC---CCccccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999966999999999999888531 12356889999999999999999999999
Q ss_pred hcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee----
Q 013204 331 RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---- 405 (447)
Q Consensus 331 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---- 405 (447)
+++.+++++++++|++.|+++ .+++.+.+++|.|+++++++..+..+..++.........+.+.++++|+++.+.
T Consensus 324 ~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~ 403 (443)
T PRK07483 324 DGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTI 403 (443)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccc
Confidence 999999999999999999987 678889999999999999997654333333222234566889999999999764
Q ss_pred ----CCEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 406 ----GDNIMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 406 ----g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
++.+||.||+++|++|||+++++|++++.++.
T Consensus 404 ~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 404 DGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred cCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999998754
No 18
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=4.7e-71 Score=545.31 Aligned_cols=425 Identities=34% Similarity=0.646 Sum_probs=354.5
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+|+|++.... ..|+++++++|+++||.|||+||||.+++|+.+|||+||+|.+|+.++++++.+... ...+++..
T Consensus 18 ~~~~~~~~~~---~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~ 92 (451)
T PRK07678 18 VWHGMKPYNP---NATMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPL--TQSHEPAI 92 (451)
T ss_pred cCCCcccccc---CCCeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccc--ccCCHHHH
Confidence 4777754433 258999999999999999999999999999999999999999999999988654322 34678899
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
++++++++.++. .++++|++||+||++.|||++|.++..+|++++.+||.|+++|||++.++++.++.+.++..+...
T Consensus 93 ~lae~l~~~~~~--~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~ 170 (451)
T PRK07678 93 KLAEKLNEWLGG--EYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPL 170 (451)
T ss_pred HHHHHHHHhCCC--CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCC
Confidence 999999998742 358999999999999999999999877777788999999999999999999998876666555555
Q ss_pred CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCE
Q 013204 161 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 240 (447)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~ 240 (447)
.+.+.+++.|+.++.+.. ...+......++.+++++....++++++||+||+++++|+++|+++||++|+++|++||++
T Consensus 171 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~l 249 (451)
T PRK07678 171 APGFLHVPPPDCYRMPGI-ESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGAL 249 (451)
T ss_pred CCCCEEeCCCcccccccc-CChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 555666777665543221 1122233334566788786555678999999999999999999999999999999999999
Q ss_pred EEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHH
Q 013204 241 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 320 (447)
Q Consensus 241 li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a 320 (447)
||+|||+|||||+|..|+++++|++||++|+||+|+||++|+|++++++++++.+.... ..+.+.|++||++||++|++
T Consensus 250 lI~DEV~tGfGRtG~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~-~~~~~~h~~T~~gnp~~~aa 328 (451)
T PRK07678 250 LISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKG-EYEHFRHVNTFGGNPAACAL 328 (451)
T ss_pred EEEeehhhcCCcCchhHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhccC-cccccccCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999789999999999998885321 11245688999999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcC
Q 013204 321 AIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 399 (447)
Q Consensus 321 a~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 399 (447)
++++|++++++++.+++++++++|++.|+++ .+++.+.+++|.|+++++++..+.....+ .+......+...|+++|
T Consensus 329 a~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~--~~~~~a~~i~~~l~~~G 406 (451)
T PRK07678 329 ALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEP--ADNDKVASVVAACKEKG 406 (451)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCc--CchHHHHHHHHHHHHCC
Confidence 9999999998899999999999999999776 67888999999999999999754322111 11224566888999999
Q ss_pred ceEEeeC-------CEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 400 MLVRVSG-------DNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 400 i~~~~~g-------~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
+++.+.+ +.+||+||+++|++||++++++|++++.++
T Consensus 407 v~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 407 LIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred cEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 9987642 679999999999999999999999999765
No 19
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=5.9e-71 Score=544.05 Aligned_cols=419 Identities=32% Similarity=0.584 Sum_probs=350.6
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+|++|+.+. ..+|+++++++|+||||.|||+||||.+++|+++|||+||+|.+|+.++++++...+. ...+++..
T Consensus 24 ~~~~~~~~~---~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~--~~~~~~~~ 98 (451)
T PRK06062 24 VFHSWSAQG---KINPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP--AHANDARS 98 (451)
T ss_pred ccccccccc---cCCCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC--ccCCHHHH
Confidence 477776542 3478999999999999999999999999999999999999999999999988654432 34788999
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
+++++|++..+ .+.++|+|++||+||++.|||++|.+ +++++||.|+++|||++.++++.++.+..... ...
T Consensus 99 ~lae~L~~~~p-~~~~~v~f~~SGsEAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~-~~~ 170 (451)
T PRK06062 99 EAARLIAERAP-GDLSKVFFTNGGADANEHAVRMARLH------TGRPKVLSAYRSYHGGTGSAINLTGDPRRWPN-DTG 170 (451)
T ss_pred HHHHHHHHhCC-CCCCEEEEcCChHHHHHHHHHHHHHh------hCCceEEEEeCCCCCCCHHHHhhcCCcccccC-CCC
Confidence 99999999863 45689999999999999999999988 56789999999999999999998876543322 222
Q ss_pred CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCE
Q 013204 161 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 240 (447)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~ 240 (447)
.+.+.+++.|..++.+....+.++....+++++++++...+++++++||+||+++++|+++|+++||++|+++|++||++
T Consensus 171 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~l 250 (451)
T PRK06062 171 RAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIV 250 (451)
T ss_pred CCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 23344555555444333222334455566788999886554578999999999999999999999999999999999999
Q ss_pred EEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHH
Q 013204 241 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 320 (447)
Q Consensus 241 li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a 320 (447)
||+|||++||||+|..|+++++|+.||++|+||+|+||++|+|++++++++++.+.. ..+.+++||++||++|++
T Consensus 251 LI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~-----~~~~~~~T~~gnpl~~Aa 325 (451)
T PRK06062 251 LIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFAD-----RPYPGGLTYSGHPLACAA 325 (451)
T ss_pred EEeeccccCCCcCcHHHHHHhcCCCCCeeeechhhhcCCcCcEEEEEcHHHHHHhcc-----CCCCCCCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999997899999999999998852 245677899999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHH-HHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCC---CcchHHHHHHHH
Q 013204 321 AIEALKIYKERNIVEQVNKIA-PKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPP---EWGIGAYFGAQC 395 (447)
Q Consensus 321 a~a~l~~~~~~~~~~~~~~~~-~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~l 395 (447)
++++|++++++++.+++++++ +++++.|+++ .+++.+.+++|.|+++++++..+.....++.. .......+.+.|
T Consensus 326 a~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l 405 (451)
T PRK06062 326 AVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAAC 405 (451)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHH
Confidence 999999999989999999999 6999999998 66788999999999999999754322222211 112356688899
Q ss_pred HHcCceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 396 EKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 396 ~~~Gi~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
+++|+++.+.++.+||+||+.+|++|||+++++|++++++++
T Consensus 406 ~~~Gvl~~~~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 406 KERGLLPFVNGNRIHVVPPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred HHCCcEEeecCCEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence 999999988778999999999999999999999999998765
No 20
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-70 Score=540.64 Aligned_cols=432 Identities=35% Similarity=0.676 Sum_probs=364.0
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+|+||++........|+++++++|+++||.|||+||||.+++|+++|||+||+|.+|+.++++++.+... +...++...
T Consensus 20 ~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~-~~~~~~~~~ 98 (460)
T PRK06541 20 LWMHFTRHGAYIDAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPL-WSYAHPPAI 98 (460)
T ss_pred cccCccCccccccCCCceEEeCcccEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccc-cccCCHHHH
Confidence 6999999965433347889999999999999999999999999999999999999999999988654332 245788999
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
++++++++..+ .+.++++|++||+||++.|||+++.+++.+|++++.+||.|+++|||++.++++.++.+.++..+...
T Consensus 99 ~la~~l~~~~p-~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~ 177 (460)
T PRK06541 99 ELAERLAALAP-GDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPL 177 (460)
T ss_pred HHHHHHHHhCC-CCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCC
Confidence 99999999863 45679999999999999999999999877777778999999999999999999998877666666555
Q ss_pred CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCE
Q 013204 161 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 240 (447)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~ 240 (447)
.+.+.++++|+.++.+....+.+.+...+++.+++++...+++++++||+||+++++|.++++++||++|+++|++||++
T Consensus 178 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~l 257 (460)
T PRK06541 178 VPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVL 257 (460)
T ss_pred CCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 56667777776554331122334455566788898887555678999999999999999999999999999999999999
Q ss_pred EEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHH
Q 013204 241 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 320 (447)
Q Consensus 241 li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a 320 (447)
+|+||||+||||+|..|+++++++.||++++||++++|++|+|++++++++++.+.... +.+.+++|+++||+++++
T Consensus 258 lI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~~~---~~~~~~~T~~gnp~~~aa 334 (460)
T PRK06541 258 LVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGP---TMFLHGYTFGGHPVSAAV 334 (460)
T ss_pred EEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhcCC---CccccCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999669999999999998886321 355678899999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCC---cchHHHHHHHHHH
Q 013204 321 AIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPE---WGIGAYFGAQCEK 397 (447)
Q Consensus 321 a~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~l~~ 397 (447)
++++|++++++++.+++++++++|++.|+++..++++..+++.|++++++|..+..+..++... ......+...|++
T Consensus 335 ala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 414 (460)
T PRK06541 335 ALANLDIFEREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFE 414 (460)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHh
Confidence 9999999988899999999999999999998557888899999999999997543333333221 0112357788999
Q ss_pred cCceEEee--C-CEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 398 HGMLVRVS--G-DNIMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 398 ~Gi~~~~~--g-~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
+|+++.+. + +.+||+||+++|++||++++++|++++.++.
T Consensus 415 ~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 415 AGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred CCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999863 3 6799999999999999999999999998754
No 21
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.7e-69 Score=532.36 Aligned_cols=426 Identities=33% Similarity=0.592 Sum_probs=354.1
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
.|+|++..... ...|+++++++|+++||.|||+||||.+++++.+|||+||+|.+|+.++++++.+.+. +...++...
T Consensus 15 ~~~~~~~~~~~-~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-~~~~~~~~~ 92 (442)
T PRK13360 15 FWMPFTANRQF-KKAPRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPA-FQMGHPKAF 92 (442)
T ss_pred cccCccccccc-cCCCceEEeeeeeEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCccc-CCcCCHHHH
Confidence 48888765332 3468999999999999999999999999999999999999999999999988654433 245788899
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
++++++++.++ .+.++++|++||+||++.|||+++.++..++++++.+||.|.++|||++.++++.++.+.++..+...
T Consensus 93 ~la~~l~~~~p-~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~ 171 (442)
T PRK13360 93 ELANRIAEIAP-GGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGAL 171 (442)
T ss_pred HHHHHHHHhCC-CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCC
Confidence 99999999873 45679999999999999999999998766666667899999999999999999999877666655544
Q ss_pred CCcceecCCCCc-ccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCC
Q 013204 161 APFVLHTDCPHY-WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI 239 (447)
Q Consensus 161 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~ 239 (447)
.+...+++++.. .+.+.. ...+.+...++++|++++....++++++||+||+++++|.++|+++||++|+++|++||+
T Consensus 172 ~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~ 250 (442)
T PRK13360 172 LPGVDHLPHTLDLARNAFS-KGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGI 250 (442)
T ss_pred CCCCEEeCCCchhhccccC-CChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 444555555431 221111 112344455678889888765557899999999999999999999999999999999999
Q ss_pred EEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHH
Q 013204 240 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 319 (447)
Q Consensus 240 ~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~ 319 (447)
+||+|||||||||+|..|+++++++.||++++||+++||++|+|++++++++++.+.........+.+++||+++|++|+
T Consensus 251 llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~a 330 (442)
T PRK13360 251 LLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACA 330 (442)
T ss_pred EEEEechhhCCCCCccchhhhhcCCCCceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999988999999999999888642111112457789999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcC
Q 013204 320 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 399 (447)
Q Consensus 320 aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 399 (447)
+++++|++++++++.++++++++++++.|+++.+++.+.+++|.|++.++.+....... ......+...|+++|
T Consensus 331 aa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~------~~~~~~~~~~l~~~G 404 (442)
T PRK13360 331 AALATLDLYEREGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKP------GKRAYEVFLKCFEKG 404 (442)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCc------chhHHHHHHHHHHCC
Confidence 99999999998899999999999999999988557788899999999998886432111 012445778899999
Q ss_pred ceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 400 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 400 i~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
|++...++.+||+||+++|++|||+++++|+++++++
T Consensus 405 vl~~~~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 405 LMIRYTGDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred cEEEecCCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 9999888899999999999999999999999999764
No 22
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.7e-69 Score=532.78 Aligned_cols=426 Identities=35% Similarity=0.626 Sum_probs=355.3
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
.|+||+++... .+.|+++++++|+++||.|||+||||.+++|+.+|||+||+|.+++.++++++.+.+. +...++...
T Consensus 18 ~~~~~~~~~~~-~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-~~~~~~~~~ 95 (445)
T PRK09221 18 HWMPFTANRQF-KAAPRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPA-FQMGHPLAF 95 (445)
T ss_pred cccCccccccc-CCCCceEEeccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccc-cccCCHHHH
Confidence 49999765332 3468999999999999999999999999999999999999999999999988654433 245788899
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
+++++|++.++ .+.++|+|++||+||++.|||+++.++..+|++++.+||.|.++|||.+.++++.++.+.++..+...
T Consensus 96 ~la~~L~~~~p-~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~ 174 (445)
T PRK09221 96 ELAERLAELAP-GGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGL 174 (445)
T ss_pred HHHHHHHHhCC-CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCC
Confidence 99999999873 45679999999999999999999999877776678899999999999999999998876666555444
Q ss_pred CCcceecCCCC-cccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCC
Q 013204 161 APFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI 239 (447)
Q Consensus 161 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~ 239 (447)
.+.+.+++++. .++.+.. ...+.+...+.+++++++...+++++++||+||+++++|.+.|+++||++|+++|++||+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~ 253 (445)
T PRK09221 175 LPGVDHLPHTLDLPENAFS-KGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGI 253 (445)
T ss_pred CCCCeEeCCCccccccccC-CChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 44455565543 2221111 112334445567888888765557899999999999999999999999999999999999
Q ss_pred EEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHH
Q 013204 240 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 319 (447)
Q Consensus 240 ~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~ 319 (447)
++|+||||+||||+|..|+++++++.||++++||+++||++|+|++++++++++.+.........+.+++||+++|++++
T Consensus 254 llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~a 333 (445)
T PRK09221 254 LLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACA 333 (445)
T ss_pred EEEEeehhhCCCcCchhhHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHH
Confidence 99999999999999999999999999999999999999988999999999999987532111123457789999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcC
Q 013204 320 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 399 (447)
Q Consensus 320 aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 399 (447)
+++++|++++++++.++++++++++++.|+++.+++.+.++++.|++.++++....... ......+.+.|+++|
T Consensus 334 aa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~------~~~~~~~~~~~~~~G 407 (445)
T PRK09221 334 AGLATLDIYREEDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAP------GARGYEAFMKCFEKG 407 (445)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccc------cchHHHHHHHHHHCC
Confidence 99999999988899999999999999999998667888899999999999987532110 012345778899999
Q ss_pred ceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 400 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 400 i~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
+++...++.+||+||+++|++||++++++|++++.++
T Consensus 408 v~~~~~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 408 LLVRYTGDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred eEEeecCCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 9998888899999999999999999999999999764
No 23
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-69 Score=530.40 Aligned_cols=419 Identities=33% Similarity=0.564 Sum_probs=350.7
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
.++| ++++++|+++||.|||+||||.+++|+.+|||+||+|.+|+.++++++.+.+. ....+++..+++++|++.++
T Consensus 12 ~~~p-~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~lae~L~~~~p- 88 (447)
T PRK06917 12 QPYP-VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYR-SQFTSEPAEKLAKKLSDLSP- 88 (447)
T ss_pred CCCC-eEEeeeeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccc-cccCCHHHHHHHHHHHHhCC-
Confidence 3566 59999999999999999999999999999999999999999999988643322 13467889999999999874
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCc
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
...++++|++|||||++.|||++++++..++.+++.+||.|+++|||++.++++.++...++..+......+..++.|..
T Consensus 89 ~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~ 168 (447)
T PRK06917 89 GDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYC 168 (447)
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcc
Confidence 34579999999999999999999999877788889999999999999999999888766555444433333344444443
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCC-CCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCC
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGA-GGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 251 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~-~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g 251 (447)
++.+.. .+.+.+..++++.+++++....++++++||+||++++ ||+++|+++|+++|+++|++||+++|+|||++|||
T Consensus 169 ~~~~~~-~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfG 247 (447)
T PRK06917 169 YRCPVQ-KVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLG 247 (447)
T ss_pred cccccC-CChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcC
Confidence 332221 2234555667788888887655568999999999984 67999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh
Q 013204 252 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 331 (447)
Q Consensus 252 ~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~ 331 (447)
|+|..|+++++++.||++++||+++||++|+|++++++++++.+... .+.+.+++||++||++|++++++|++++++
T Consensus 248 RtG~~~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~---~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~ 324 (447)
T PRK06917 248 RTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRG---SRSIMSGHTLSANPLSAATALAVLEYMEKH 324 (447)
T ss_pred cccchhhHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhcc---CcccccccCCCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999977999999999999988632 124567789999999999999999999988
Q ss_pred cHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-----
Q 013204 332 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----- 405 (447)
Q Consensus 332 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----- 405 (447)
++.+++++++++|++.|+++ .+++.+.+++|.|++++++|..+.....++.........+.+.|+++|+++.+.
T Consensus 325 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~ 404 (447)
T PRK06917 325 NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQD 404 (447)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccC
Confidence 99999999999999999998 568999999999999999997544333333322234667889999999999865
Q ss_pred ---CCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 406 ---GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 406 ---g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
++.+|++||+++|++||++++++|+++++++.+
T Consensus 405 g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 405 GKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred CCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999988743
No 24
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4.5e-68 Score=519.73 Aligned_cols=410 Identities=29% Similarity=0.517 Sum_probs=347.1
Q ss_pred CCCCCCcCccCCCCCC-eEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHH
Q 013204 1 MLAPFTAGWQSTDVHP-LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS 79 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~ 79 (447)
+|+||.+... .+| +++++++|+++||.|||+||||.+++|+.+|||+||+|.+|+.++++++.+.. .....+++.
T Consensus 14 ~~~~~~~~~~---~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-~~~~~~~~~ 89 (429)
T PRK06173 14 IWHPYSSVTD---PIPVYPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIM-FGGFTHEPA 89 (429)
T ss_pred cccccccccc---cCCCceEEeceeeEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCcc-ccccCCHHH
Confidence 4788766532 344 46999999999999999999999999999999999999999999998865432 123478899
Q ss_pred HHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCC-ccccCCCC
Q 013204 80 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFD 158 (447)
Q Consensus 80 ~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~-~~~~~~~~ 158 (447)
.+|++++++.++ .+.++++|++||+||+++|||+++.++..+|++++.+||.+.++|||.+.+++++++. +.++..+.
T Consensus 90 ~~lae~L~~~~p-~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 168 (429)
T PRK06173 90 VELAQKLLEILP-PSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFN 168 (429)
T ss_pred HHHHHHHHhhCC-CCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhccc
Confidence 999999999873 4578999999999999999999999987778778899999999999999999988764 33444444
Q ss_pred CCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccc-cCCCCCccCChhHHHHHHHHHHhc
Q 013204 159 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKY 237 (447)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv-~~~~G~~~~~~~~l~~l~~l~~~~ 237 (447)
...+...++++|+... .+.+...+++.+++.+.. .++++++||+||+ +++||.++|+++|+++|+++|++|
T Consensus 169 ~~~~~~~~~~~p~~~~-------~~~~~~~~l~~l~~~i~~-~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~ 240 (429)
T PRK06173 169 HSLPVQYFLPQPSIKF-------GEEWNDEAIEPLQDLLEQ-KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQY 240 (429)
T ss_pred ccCCCCeEeCCCCccc-------chhHHHHHHHHHHHHHHh-CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHc
Confidence 3334445555554210 133455567888888864 3468999999997 999999999999999999999999
Q ss_pred CCEEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHH
Q 013204 238 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS 317 (447)
Q Consensus 238 g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 317 (447)
|++||+||||+||||+|..|+++++++.||++++||+++||++|++.+++++++++.+... ..+.+.+++||.++|++
T Consensus 241 g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~--~~~~~~~~~T~~g~p~~ 318 (429)
T PRK06173 241 GVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSG--EAKCFMHGPTFMANPLA 318 (429)
T ss_pred CCeEEecchhcCCCcCCcchHHHhcCCCCCEEEeehhhhCCccccceEEecHHHHHHHhcC--CCCccccCCCCCcCHHH
Confidence 9999999999999999999999999999999999999999978999999999999988531 12245788899999999
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHH
Q 013204 318 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK 397 (447)
Q Consensus 318 ~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 397 (447)
|++++++|++++++++.+++++++++|++.|+++.+++.+.++++.|+++++.+.++. ....+.+.|++
T Consensus 319 ~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~-----------~~~~i~~~l~e 387 (429)
T PRK06173 319 CAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPV-----------NMATLQPRFVE 387 (429)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcc-----------cHHHHHHHHHH
Confidence 9999999999998889999999999999999887557778889999999999996532 13457889999
Q ss_pred cCceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 398 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 398 ~Gi~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
+|+++.+.++.|||.||+++|++||++++++|++++.++
T Consensus 388 ~Gi~v~~~g~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 388 HGIWVRPFGKLVYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred CCeEEEecCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 999999988899999999999999999999999999764
No 25
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=5.1e-68 Score=518.54 Aligned_cols=409 Identities=27% Similarity=0.489 Sum_probs=344.6
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+|+|++++.. ...|+++++++|+++||.|||+||||.+++|+++|||+||+|.+|+.++++++.+.. .....+++..
T Consensus 13 ~~~~~~~~~~--~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~-~~~~~~~~~~ 89 (428)
T PRK07986 13 IWHPYTSMTS--PLPVYPVVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVM-FGGITHPPAI 89 (428)
T ss_pred cccCCccccc--CCCCeeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcc-ccccCCHHHH
Confidence 4888876653 223478999999999999999999999999999999999999999999998865432 1134788899
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCC-ccccCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDL 159 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~-~~~~~~~~~ 159 (447)
++++++++..+ .+.++++|++||+||++.|||+++.++..+| +++.+||.|+++|||.+.+++++++. ..++..+..
T Consensus 90 ~la~~L~~~~p-~~~~~v~f~~SGsEAve~AlklAr~~~~~~g-~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~ 167 (428)
T PRK07986 90 ELCRKLVAMTP-QPLECVFLADSGSVAVEVAMKMALQYWQAKG-EPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKG 167 (428)
T ss_pred HHHHHHHhhCC-CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcC-CCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCC
Confidence 99999999873 4568999999999999999999999876555 45789999999999999999988764 234444443
Q ss_pred CCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccc-cCCCCCccCChhHHHHHHHHHHhcC
Q 013204 160 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYD 238 (447)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv-~~~~G~~~~~~~~l~~l~~l~~~~g 238 (447)
..+...+++.|... ..+.+.+++++++++.+... ++++++||+||+ ++.+|+++|+++||++|+++|++||
T Consensus 168 ~~~~~~~~~~p~~~-------~~~~~~~~d~~~l~~~l~~~-~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g 239 (428)
T PRK07986 168 YLPENLFAPAPQSR-------FDGEWDERDIAPFARLMAAH-RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREG 239 (428)
T ss_pred CCCCCEEECCCCcc-------cchhhHHHHHHHHHHHHHhC-CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence 33334445544321 01235677788898888643 467999999996 9999999999999999999999999
Q ss_pred CEEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHH
Q 013204 239 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC 318 (447)
Q Consensus 239 ~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~ 318 (447)
++||+||||+||||+|..|++++++++||++++||+++||++|+|++++++++++.+.... ...+.+++||++||++|
T Consensus 240 ~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~--~~~~~~~~T~~g~p~~~ 317 (428)
T PRK07986 240 ILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETISNGE--AGCFMHGPTFMGNPLAC 317 (428)
T ss_pred CEEEEeccccCCccCCCeeeecccCCCCCEEEechhhhCCcccCcchhchHHHHHHhhcCC--CCccccCCCCCcCHHHH
Confidence 9999999999999999999999999999999999999999789999999999999986321 12356888999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHc
Q 013204 319 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH 398 (447)
Q Consensus 319 ~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 398 (447)
++++++|++++++++.+++++++++|++.|+++.+++.+.+++|.|++.++++.++. ....+.+.|+++
T Consensus 318 aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~-----------~~~~~~~~l~~~ 386 (428)
T PRK07986 318 AVANASLSLLESGDWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPV-----------NMAALQRFFVEQ 386 (428)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcc-----------cHHHHHHHHHHC
Confidence 999999999998899999999999999999998557888999999999999986532 134588899999
Q ss_pred CceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 399 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 399 Gi~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
|+++.+.|+.+||.||+++|+++|++++++|++++++
T Consensus 387 Gl~~~~~g~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 387 GVWIRPFGKLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred CcEEEecCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 9999988889999999999999999999999999854
No 26
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-68 Score=521.58 Aligned_cols=388 Identities=30% Similarity=0.514 Sum_probs=335.6
Q ss_pred CCCCeEEEEecC-cEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC
Q 013204 13 DVHPLVIEKSEG-SYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT 91 (447)
Q Consensus 13 ~~~~~~~~~~~g-~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (447)
..+|+++.+++| +|+||.|||+||||.+++|+.++||+||+|.+|+.++++++...+. ...++...++++++++.++
T Consensus 61 ~~~~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~--~~~~~~~~~lae~L~~~~p 138 (459)
T PRK11522 61 GDYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQ--ELLDPLRAMLAKTLAALTP 138 (459)
T ss_pred CCCCeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCccccc--ccCCHHHHHHHHHHHHhCC
Confidence 467899999999 9999999999999999999999999999999999999988654432 3468889999999999863
Q ss_pred cCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCC
Q 013204 92 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 171 (447)
Q Consensus 92 ~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (447)
.+.++++|++||+|||+.|||++|.++.. +++.+||.++++|||++.++++.++.+.++..+....+.+..+++++
T Consensus 139 -~~~~~v~f~~SGsEAve~AlklAr~~t~~---~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d 214 (459)
T PRK11522 139 -GKLKYSFFCNSGTESVEAALKLAKAYQSP---RGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGN 214 (459)
T ss_pred -CCCCEEEEeCCchHHHHHHHHHHHHHhcc---CCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCC
Confidence 45679999999999999999999988532 34678999999999999999999887766655544444444444432
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHhh--CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcC
Q 013204 172 YWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 249 (447)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g 249 (447)
.+++++.+... .++++++||+||+++++|.++|+++||++++++|++||+++|+||||+|
T Consensus 215 ------------------~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG 276 (459)
T PRK11522 215 ------------------IEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTG 276 (459)
T ss_pred ------------------HHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceec
Confidence 25566666432 3467999999999999999999999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh
Q 013204 250 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK 329 (447)
Q Consensus 250 ~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~ 329 (447)
|||+|..|+++++|+.||++|+||+|+||++|+|++++++++++.+.. +.+.+++||++||++|++++++|++++
T Consensus 277 ~GRtG~~~a~e~~gv~PDivt~gK~lggG~~Pigav~~~~~i~~~~~~-----~~~~~~~T~~gnp~~~Aaala~L~~i~ 351 (459)
T PRK11522 277 MGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLL 351 (459)
T ss_pred CCccchhhhhhccCCCCCEEEechhhhCCCccceeEEEcHHHHHHhcc-----CCcccCCCCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999997899999999999887742 245688999999999999999999999
Q ss_pred hhcHHHHHHHHHHHHHHhHhhc-cCCC-ceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee--
Q 013204 330 ERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-- 405 (447)
Q Consensus 330 ~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-- 405 (447)
++++.+++++++++|++.|+++ .+++ .+.+++|.|+++++++.++. ....+.+.|+++||++.+.
T Consensus 352 ~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~~-----------~~~~i~~~l~~~Gvl~~~~~~ 420 (459)
T PRK11522 352 EQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE-----------IGYNFASEMFRQRVLVAGTLN 420 (459)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCch-----------HHHHHHHHHHHCCeEEEecCC
Confidence 8899999999999999999998 5677 78999999999999997542 2456888999999999865
Q ss_pred -CCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 013204 406 -GDNIMMSPPFIMSPEEVDELISKYGKALKATEERV 440 (447)
Q Consensus 406 -g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~ 440 (447)
++++||.||+.+|++||++++++|+++++++++.+
T Consensus 421 ~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~~~ 456 (459)
T PRK11522 421 NAKTIRIEPPLTLTIEQCEQVLKAARKALAAMRVSV 456 (459)
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 36899999999999999999999999999887654
No 27
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-67 Score=519.85 Aligned_cols=405 Identities=26% Similarity=0.462 Sum_probs=335.8
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
.+|+++++++|+|+||.|||+||||.+++|++++||+||+|.+|+.+++++....+.. ...++...++++++.+..+.
T Consensus 44 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~la~~L~~~~p~- 121 (464)
T PRK06938 44 RIPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTL-DLTTPVKDQFVQDLFASLPE- 121 (464)
T ss_pred CCCceEEeccccEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccccc-ccCCHHHHHHHHHHHHhCcc-
Confidence 5789999999999999999999999999999999999999999999999753322221 34688899999999988642
Q ss_pred CC---CeEEEe-CChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCC
Q 013204 94 KM---AKVFFT-NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC 169 (447)
Q Consensus 94 ~~---~~v~~~-~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (447)
.. ++++|+ +||+||++.|||++|.+ +++++||.++++|||++.++++.++...++..+....+.+..+++
T Consensus 122 ~~~~~~~v~f~~~SGSEAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~ 195 (464)
T PRK06938 122 AFAREAKIQFCGPTGTDAVEAALKLVKTA------TGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPY 195 (464)
T ss_pred cccccceEEEeCCCcHHHHHHHHHHHHHh------hCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCC
Confidence 22 367776 79999999999999977 567899999999999999999988876555555443344566777
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHHHHHhh--CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhh
Q 013204 170 PHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI 247 (447)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~ 247 (447)
|+.++.+... ..+.....+++.+++.+... +++++++||+||+++++|.++|+++||++|+++|++||++||+|||+
T Consensus 196 p~~~~~~~~~-~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~ 274 (464)
T PRK06938 196 PYDYRCPFGL-GGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQ 274 (464)
T ss_pred CccccccccC-chhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 6554433321 12333445578888888643 23579999999999999999999999999999999999999999999
Q ss_pred cCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHH
Q 013204 248 CAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI 327 (447)
Q Consensus 248 ~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~ 327 (447)
|||||+|..|+++++|+.||++|+||+++|| +|+|++++++++ +.+. ...+++||++||++|++++++|++
T Consensus 275 tGfGRtG~~~a~e~~gv~PDiv~~gKglggG-~PlsAv~~~~~~-~~~~-------~~~~~~T~~gnpla~Aaa~a~L~~ 345 (464)
T PRK06938 275 SGFGRTGKMFAFEHAGIIPDVVVLSKAIGGS-LPLAVVVYREWL-DTWQ-------PGAHAGTFRGNQMAMAAGSATLRY 345 (464)
T ss_pred cCCCcCcHHHHHHhcCCCCCEEEeeccccCC-CceEEEeehhHh-hccC-------CCCCCCCCCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 799999999885 5442 235788999999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCC---CCCCcchHHHHHHHHHHcCceEE
Q 013204 328 YKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEP---FPPEWGIGAYFGAQCEKHGMLVR 403 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~Gi~~~ 403 (447)
++++++.+++++++++|++.|+++ .+++.+.+++|.|+++++++..+...... .+........+.+.|+++|+++.
T Consensus 346 l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~ 425 (464)
T PRK06938 346 IKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILE 425 (464)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEe
Confidence 999999999999999999999998 67899999999999999999754322111 01111245667888999999998
Q ss_pred ee---CCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 404 VS---GDNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 404 ~~---g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
+. ++.|||.||+++|++||++++++|++++.++
T Consensus 426 ~~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 426 LGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred ecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 64 3789999999999999999999999999775
No 28
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.4e-67 Score=514.09 Aligned_cols=407 Identities=28% Similarity=0.501 Sum_probs=339.8
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+|+|+.. ...+|+++++++|+|+||.|||+||||.+++++.+|||+||+|.+|+.++++++.+.. .....+++..
T Consensus 12 ~~~~~~~----~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~-~~~~~~~~~~ 86 (422)
T PRK05630 12 IWHPYAA----PGVRNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVM-FGGLTHEPAI 86 (422)
T ss_pred cccCccc----CCCCCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcc-cCCcCCHHHH
Confidence 4666643 2347899999999999999999999999999999999999999999999998864322 1134688899
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCC-ccccCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDL 159 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~-~~~~~~~~~ 159 (447)
++++++++..+ .+.++++|++||+||++.|||++++++..+|.+++.+||.+.++|||.+.++++.++. ..++..+..
T Consensus 87 ~lae~L~~~~p-~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~ 165 (422)
T PRK05630 87 KLTRKLLNLTD-NGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKG 165 (422)
T ss_pred HHHHHHHhhCC-CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccc
Confidence 99999999863 4568999999999999999999999987777777899999999999999999998774 334444443
Q ss_pred CCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccc-cCCCCCccCChhHHHHHHHHHHhcC
Q 013204 160 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYD 238 (447)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv-~~~~G~~~~~~~~l~~l~~l~~~~g 238 (447)
......+++.|... ....++ ...+++.+++++. +++++||+||+ ++++|.++|+++|+++|+++|++||
T Consensus 166 ~~~~~~~~p~~~~~-----~~~~~~-~~~~~~~~~~~~~----~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g 235 (422)
T PRK05630 166 TLPEQIFAPAPPVR-----GSSPQE-ISEYLRSLELLID----ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHD 235 (422)
T ss_pred cCCCCeEcCCCccc-----CCChHH-HHHHHHHHHHHHh----hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence 33334455554321 111111 2234566666664 57999999996 9999999999999999999999999
Q ss_pred CEEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHH
Q 013204 239 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC 318 (447)
Q Consensus 239 ~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~ 318 (447)
+++|+|||++||||+|..|+++++++.||++|+||+++||++|+|++++++++++.+.... ..+.+.|++||.+||++|
T Consensus 236 ~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~-~~~~~~h~~T~~g~Pla~ 314 (422)
T PRK05630 236 ILLIADEIATGFGRTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPN-GGGALMHGPTFMANPLAC 314 (422)
T ss_pred CEEEEecceeCCCcCchhhHHHhcCCCCCeeeeechhhcCccccceeeccHHHHHHHhccC-CCCccccCCCCcCCHHHH
Confidence 9999999999999999999999999999999999999999779999999999999885321 113456889999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHc
Q 013204 319 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH 398 (447)
Q Consensus 319 ~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 398 (447)
++++++|++++++++.+++++++++|++.|+.+..++.+.+++|.|+++++++.++. ....+.+.++++
T Consensus 315 aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~-----------~~~~~~~~~~~~ 383 (422)
T PRK05630 315 AVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPV-----------DMEEATQAAVDH 383 (422)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCcc-----------cHHHHHHHHHHC
Confidence 999999999998889999999999999999888557888999999999999996432 134577889999
Q ss_pred CceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 399 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 399 Gi~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
|+++.+.|+.+||.||+++|++||++++++|++++++
T Consensus 384 Gl~~~~~g~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 384 GVWLRPFGRLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred CeEEEecCCEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 9999988889999999999999999999999999864
No 29
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=1.8e-67 Score=514.82 Aligned_cols=378 Identities=30% Similarity=0.511 Sum_probs=325.3
Q ss_pred CeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCC
Q 013204 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKM 95 (447)
Q Consensus 16 ~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 95 (447)
++++.++.|+|+||.|||+||||.+++++.++||+||+|.+|+.++++++...+. ...++...+++++|++.++ .+.
T Consensus 58 ~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~--~~~~~~~~~lAe~L~~~~p-~~~ 134 (442)
T TIGR03372 58 AVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQ--ELLDPLRALLAKTLAALTP-GKL 134 (442)
T ss_pred eeEEEeCCeeEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCccc--ccCCHHHHHHHHHHHHhCC-CCc
Confidence 3445677779999999999999999999999999999999999999988654432 2468889999999999874 345
Q ss_pred CeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccC
Q 013204 96 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY 175 (447)
Q Consensus 96 ~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (447)
++++|++||+|||+.|||+++.++.. +++.+||.++++|||++.++++.++.+.++..+....+.+.++|+++.
T Consensus 135 ~~v~f~~SGsEA~e~AlklAr~~t~~---~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~--- 208 (442)
T TIGR03372 135 KYSFFCNSGTESVEAALKLAKAYQSP---RGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDI--- 208 (442)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHhh---cCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCH---
Confidence 78999999999999999999988543 346789999999999999999998876666655544455566666542
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHh--hCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcc
Q 013204 176 AHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 253 (447)
Q Consensus 176 ~~~~~~~~~~~~~~~~~le~~l~~--~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~ 253 (447)
+++++.+.. .+++++++||+||+++++|.++|+++||++++++|++||+++|+||||+||||+
T Consensus 209 ---------------~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt 273 (442)
T TIGR03372 209 ---------------EAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRT 273 (442)
T ss_pred ---------------HHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcc
Confidence 444444432 234689999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcH
Q 013204 254 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 333 (447)
Q Consensus 254 g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~ 333 (447)
|..|+++++++.||++++||+|+||++|+|++++++++++.+.. +.+.+++||++||++|++++++|++++++++
T Consensus 274 G~~~a~e~~gv~PDivt~gK~lg~G~~Pigavv~~~~i~~~~~~-----~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l 348 (442)
T TIGR03372 274 GKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFD-----NPFLHTTTFGGNPLACAAALATINELLEKNL 348 (442)
T ss_pred ccchhhhhcCCCCCeeeehhhhcCCcccceEEEecHHHHHhhhc-----cCccccCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 99999999999999999999999997799999999999988742 2456789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHhhc-cCCC-ceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee---CCE
Q 013204 334 VEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDN 408 (447)
Q Consensus 334 ~~~~~~~~~~l~~~L~~l-~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---g~~ 408 (447)
.++++++++++++.|+++ .+++ .+.+++|.|+++++++.++. ....+.+.|+++|+++.+. ++.
T Consensus 349 ~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~~-----------~~~~i~~~l~~~Gvl~~~~~~~~~~ 417 (442)
T TIGR03372 349 PAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDNE-----------IGYAFAKELFQQNILVAGTLNNAKS 417 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCChH-----------HHHHHHHHHHHCCcEEeecCCCCCE
Confidence 999999999999999998 5677 78899999999999997542 2456889999999999764 368
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 409 IMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 409 iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
+||.||+++|+++||+++++|++++
T Consensus 418 lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 418 IRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred EEEECCcccCHHHHHHHHHHHHHhC
Confidence 9999999999999999999998864
No 30
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-66 Score=514.02 Aligned_cols=403 Identities=26% Similarity=0.456 Sum_probs=340.2
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
..|+++++++|+++||.|||+||||+++ ++.+|||+||+|.+|+.++++++.+.. ....++...++++++++.++ .
T Consensus 53 ~~~~~i~~a~G~~l~D~dG~~ylD~~g~-~~~~lGh~~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~lae~L~~~~p-~ 128 (459)
T PRK06082 53 PCLDVLASAEGIYIEDVDGKKYMDFHGN-NVHQLGYGHPHVIEKVKEQMAKLPFSP--RRFTNETAIECAEKLTEIAG-G 128 (459)
T ss_pred CCCceEEeeeeeEEEECCCCEEEEcccH-hhcccCCCCHHHHHHHHHHHHhCCCcc--CccCCHHHHHHHHHHHHhCC-C
Confidence 4589999999999999999999999854 889999999999999999998865432 23468899999999999974 3
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 173 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
..++++|++||+||++.|+|+++.+ +++.+||.|.++|||++.+++++++.+.++..+....+.+..++.|..+
T Consensus 129 ~~~~v~f~~sGseAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (459)
T PRK06082 129 ELNRVLFAPGGTSAIGMALKLARHI------TGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSY 202 (459)
T ss_pred CCCEEEECCCcHHHHHHHHHHHHHh------cCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCccc
Confidence 4579999999999999999999988 5678999999999999999999888776666666555566667766554
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcc
Q 013204 174 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 253 (447)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~ 253 (447)
+.+. .+.+.....+++++++.+.. .+++++||+||++++| .++|+++||++|+++|++||++||+|||++||||+
T Consensus 203 ~~~~--~~~~~~~~~~~~~l~~~i~~--~~~vAavIvEPv~g~g-~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRt 277 (459)
T PRK06082 203 RGAF--PDADGSDVHYADYLEYVIEK--EGGIGAFIAEAVRNTD-VQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRT 277 (459)
T ss_pred cccc--CChhHHHHHHHHHHHHHHhc--CCCEEEEEECCccCCC-CcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc
Confidence 4332 22244555667888888864 2479999999999985 67889999999999999999999999999999999
Q ss_pred ccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcH
Q 013204 254 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 333 (447)
Q Consensus 254 g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~ 333 (447)
|..|+++++|+.||++++||+++||++|+|++++++++++.+. ..+.+ +|+++||++|++++++|++++++++
T Consensus 278 G~~fa~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~------~~~~~-~T~~gnpl~~aaa~a~L~~l~~~~l 350 (459)
T PRK06082 278 GEWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQ------ISLGH-YTHEKSPLGCAAALATIEVIEQEGL 350 (459)
T ss_pred chhhHhHhhCCCCCEEEecccccCCCCcceEEEEcHHHHhhcc------CCCCC-CCCCcCHHHHHHHHHHHHHHHhcCH
Confidence 9999999999999999999999999779999999999875542 12334 7999999999999999999988899
Q ss_pred HHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-CCEEEE
Q 013204 334 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMM 411 (447)
Q Consensus 334 ~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-g~~iR~ 411 (447)
.+++++++++|++.|+++ .+++.+.+++|.|+++++++..+.....+ .......+...|+++|+++.+. ++.+|+
T Consensus 351 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~---~~~~~~~~~~~~~~~Gvl~~~~~~~~i~~ 427 (459)
T PRK06082 351 LEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKER---AYDEAEAVLYRCLNNGLSFKVSQGNVIQL 427 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCc---cHHHHHHHHHHHHhCCCEEEecCCCEEEE
Confidence 999999999999999998 66899999999999999999754322111 1123456778899999999876 578999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 013204 412 SPPFIMSPEEVDELISKYGKALKATEERVK 441 (447)
Q Consensus 412 ~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~ 441 (447)
+||+++|+++|++++++|++++.++.++++
T Consensus 428 ~Ppl~it~~eid~~~~~l~~~l~~~~~~~~ 457 (459)
T PRK06082 428 SPPLIITREELTQALAILEEAIAKICQDFN 457 (459)
T ss_pred eCCCccCHHHHHHHHHHHHHHHHHHhhhcc
Confidence 999999999999999999999999877764
No 31
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-66 Score=513.24 Aligned_cols=407 Identities=28% Similarity=0.480 Sum_probs=332.9
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
.+|+++++++|+|+||.|||+||||.+++++.+|||+||+|.+|+.+++++....++ ...+++...++++++++.++..
T Consensus 39 ~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~-~~~~~~~~~~lAe~L~~~~p~~ 117 (459)
T PRK06931 39 KLPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHT-LDLTTPLKDAFSEYLLSLLPGQ 117 (459)
T ss_pred CCCceEEeccccEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccc-cccCCHHHHHHHHHHHHhCCCc
Confidence 568999999999999999999999999999999999999999999999976332222 1346788899999999987432
Q ss_pred CC--CeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCC
Q 013204 94 KM--AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 171 (447)
Q Consensus 94 ~~--~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (447)
.. ..++|++||+||++.|||++|.+ +++.+||.|+++|||++.++++.++.+.++..+....+.+.++++|+
T Consensus 118 ~~~~~~~f~~~SGsEAve~AlklAr~~------tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~ 191 (459)
T PRK06931 118 GKEYCLQFTGPSGADAVEAAIKLAKTY------TGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPH 191 (459)
T ss_pred cccceEEEeCCCcHHHHHHHHHHHHHh------cCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCc
Confidence 11 24466699999999999999988 56789999999999999999988887666665655555667778777
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHh--hCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcC
Q 013204 172 YWRYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 249 (447)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~le~~l~~--~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g 249 (447)
.++.+.... .+.....+.+.+++.+.. ..++++++||+||+++++|+++|+++||++|+++|++||+++|+|||+||
T Consensus 192 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tG 270 (459)
T PRK06931 192 EYRCPLGIG-GEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAG 270 (459)
T ss_pred cccccccCC-chhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhc
Confidence 655443211 111222222334444432 23467999999999999999999999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh
Q 013204 250 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK 329 (447)
Q Consensus 250 ~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~ 329 (447)
|||+|..|++++++++||++++||+++|| +|+|++++++++ +.+. ...+++||++||++|++++++|++++
T Consensus 271 fGRtG~~~a~~~~gv~PDivt~gK~l~gG-~Pi~av~~~~~~-~~~~-------~~~~~~T~~gnpla~aaala~L~~l~ 341 (459)
T PRK06931 271 FARTGKMFAFEHAGIEPDIIVMSKAVGGG-LPLAVLGIKKEF-DAWQ-------PGGHTGTFRGNQLAMATGLTTLKILK 341 (459)
T ss_pred CCcCchHHHhhhcCCCCCEEEecccccCC-cceeeeeeHHHH-hhcc-------CCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 799999988774 5553 23578899999999999999999999
Q ss_pred hhcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCC---CCCCCcchHHHHHHHHHHcCceEEee
Q 013204 330 ERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNE---PFPPEWGIGAYFGAQCEKHGMLVRVS 405 (447)
Q Consensus 330 ~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~Gi~~~~~ 405 (447)
++++.+++++++++|++.|+++ .+++.+.+++|.|+|+++++..+..... ..+........+...|+++|+++.+.
T Consensus 342 ~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~ 421 (459)
T PRK06931 342 EENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERG 421 (459)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeec
Confidence 9999999999999999999999 6789999999999999999975432211 11111234566888899999999765
Q ss_pred ---CCEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 406 ---GDNIMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 406 ---g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
++.+|+.||+++|++||++++++|+++++++-
T Consensus 422 ~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~ 456 (459)
T PRK06931 422 GRNGNVVRLLPPLLITQAECEEFIDRFEQALLAAV 456 (459)
T ss_pred CCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 36799999999999999999999999998754
No 32
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2e-66 Score=511.50 Aligned_cols=403 Identities=26% Similarity=0.448 Sum_probs=337.7
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
.+|+++++++|++|||.|||+||||.+++++.+|||+||+|.+|+.++++++.+.+.. ...++...++++++++..+ .
T Consensus 34 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p-~ 111 (457)
T PRK05639 34 LFPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIG-YTHSERAIRVAEKLAEISP-I 111 (457)
T ss_pred CCCceEEeeecCEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccC-ccCCHHHHHHHHHHHhhCC-C
Confidence 4689999999999999999999999999999999999999999999999886433221 2346788999999999863 3
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCC-ccccCCCCCCCCcceecCCCCc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
+.++++|++||+|||+.|||++|.+ +++.+||.|.++|||++.+++++++. ..++..+....+.+..+++++.
T Consensus 112 ~~~~v~f~~SGsEA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~ 185 (457)
T PRK05639 112 ENPKVLFGLSGSDAVDMAIKVSKFS------TRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNP 185 (457)
T ss_pred CcCEEEEeCchHHHHHHHHHHHHHh------cCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcc
Confidence 4579999999999999999999987 56789999999999999999988764 3344445444455667777765
Q ss_pred ccCCCCC---CChhHHHHHHHHHHHHHHHhh--CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhh
Q 013204 173 WRYAHPG---ETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI 247 (447)
Q Consensus 173 ~~~~~~~---~~~~~~~~~~~~~le~~l~~~--~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~ 247 (447)
++.+... .+.+.+...+++.+++.+... .++++++||+||+++++|.++|+++||++|+++|++||+++|+|||+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~ 265 (457)
T PRK05639 186 YRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQ 265 (457)
T ss_pred ccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 4432211 123445555667788776432 35789999999999999999999999999999999999999999999
Q ss_pred cCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHH
Q 013204 248 CAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI 327 (447)
Q Consensus 248 ~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~ 327 (447)
+||||+|..|+++++++.||++++||+++|| +|+|++++++++++... ..+.+|+++||++|++++++|++
T Consensus 266 tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG-~pi~av~~~~~i~~~~~--------~~~~~T~~g~p~~~aaa~a~l~~ 336 (457)
T PRK05639 266 TGIGRTGKWFASEWFEVKPDLIIFGKGVASG-MGLSGVIGRKELMDLTS--------GSALLTPAANPVISAAAEATLEI 336 (457)
T ss_pred hccCcCchHHHHHhcCCCCCEEEechhhcCC-CcceeEEehHHHHhhcC--------CCcccCCCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 79999999999988321 13457999999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC
Q 013204 328 YKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG 406 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g 406 (447)
++++++.+++++++++|++.|+++ .+++++.+++|.|+++++++..+.... .......+.+.|+++|+++.+.+
T Consensus 337 l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~-----~~~~~~~~~~~~~~~Gv~~~~~g 411 (457)
T PRK05639 337 IEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKP-----DPELTGKICWRAFELGLILPSYG 411 (457)
T ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCC-----CHHHHHHHHHHHHhCCeEEeecC
Confidence 999999999999999999999998 678999999999999999986532210 11235668889999999998764
Q ss_pred ---CEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 407 ---DNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 407 ---~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
+.+||.||+++|++|||+++++|+++++++.+
T Consensus 412 ~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~~ 446 (457)
T PRK05639 412 MFGNVIRITPPLVITKEIAEKGLEIMERAIKDALA 446 (457)
T ss_pred CCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999988753
No 33
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=2.8e-66 Score=511.22 Aligned_cols=419 Identities=27% Similarity=0.451 Sum_probs=337.1
Q ss_pred CCCCcCccCC----CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChH
Q 013204 3 APFTAGWQST----DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKP 78 (447)
Q Consensus 3 ~~~~~~~~~~----~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~ 78 (447)
|||+...... ..+|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.++++++...++. ...++.
T Consensus 5 ~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~-~~~~~~ 83 (442)
T TIGR00709 5 SRQNEMESNVRSYPRKLPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTL-DLTTPL 83 (442)
T ss_pred cHHHHHHhhhhccccCCCceEEeccccEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCcccc-ccCcHH
Confidence 4555443331 23589999999999999999999999999999999999999999999999875433321 346788
Q ss_pred HHHHHHHHHHhcCcC--CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCC
Q 013204 79 SLDLAKELLEMFTAS--KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK 156 (447)
Q Consensus 79 ~~~l~~~l~~~~~~~--~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 156 (447)
..++++++++.+++. ....++|++||+||++.|||+++.+ +++++||.+.++|||++.++++.++.+.++..
T Consensus 84 ~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~------tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~ 157 (442)
T TIGR00709 84 KDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTY------TGRTNVISFSGGFHGMTIGALAVTGNLFAKNA 157 (442)
T ss_pred HHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHh------cCCCeEEEEcCCcCCchHHHHhhcCChhhhcc
Confidence 999999999997432 1234555699999999999999988 56788999999999999999999886655555
Q ss_pred CCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHh--hCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 157 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~--~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
+....+.+..+++|+.++.+.. ...+.......+.+++.+.. ..++++++||+||+++++|.++|+++||++|+++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc 236 (442)
T TIGR00709 158 VGMLMPGVQFMPYPHEYRCPFG-IGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVT 236 (442)
T ss_pred CCCCCCCcEEeCCCcccccccc-CCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 5544445566666655443321 11122222223334554432 23467999999999999999999999999999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCc
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 314 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 314 (447)
++||+++|+|||++||||+|+.|+++++++.||++++||++++| +|+|+++++++ ++.+. ...+++||++|
T Consensus 237 ~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~~G-~Pigav~~~~~-~~~~~-------~~~~~~T~~gn 307 (442)
T TIGR00709 237 RKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVMSKAVGGG-LPLAVLLIAPE-FDAWQ-------PAGHTGTFRGN 307 (442)
T ss_pred HHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEEcccccCC-cccEEEEEchH-HhccC-------CCcCCCCCCcC
Confidence 99999999999999999999999999999999999999999998 89999999988 45443 23467899999
Q ss_pred HHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCC---CCCCCcchHHH
Q 013204 315 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNE---PFPPEWGIGAY 390 (447)
Q Consensus 315 ~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~---~~~~~~~~~~~ 390 (447)
|++|++++++|+.++++++.+++++++++|++.|+++ .+++.+.+++|.|+++++++.++..+.. .++........
T Consensus 308 pla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~ 387 (442)
T TIGR00709 308 QLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAA 387 (442)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHH
Confidence 9999999999999988999999999999999999998 6789999999999999999975432211 11112234566
Q ss_pred HHHHHHHcCceEEee---CCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 391 FGAQCEKHGMLVRVS---GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 391 ~~~~l~~~Gi~~~~~---g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
+...|+++|+++.+. ++.+|+.||+++|+++|++++++|++++.++.+
T Consensus 388 ~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~~ 438 (442)
T TIGR00709 388 IQGACFENGLLLETGGREGEVFRLLCPITIDQEECEEGISRFKQAVEEALA 438 (442)
T ss_pred HHHHHHHCCeEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999765 478999999999999999999999999987644
No 34
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=6.4e-66 Score=508.12 Aligned_cols=411 Identities=27% Similarity=0.516 Sum_probs=345.6
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+|+||+..... ++|+++++++|+++||.|||+||||.+++++++|||+||+|.+|+.++++++.+... ...+++...
T Consensus 12 ~~~~~~~~~~~--~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~ 88 (423)
T PRK05964 12 VWHPYTQMKLH--PPPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIF-AGFTHEPAE 88 (423)
T ss_pred eecCCCCcccc--CCCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccc-cccCCHHHH
Confidence 58898766433 478999999999999999999999999999999999999999999999988644321 134778899
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
++++++++.++ .+.++++|++||+||++.|||++|.++..++.+++++||.|+++|||++.++++.++.+.+...+...
T Consensus 89 ~la~~l~~~~p-~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~ 167 (423)
T PRK05964 89 RLAQRLVALTP-GGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPL 167 (423)
T ss_pred HHHHHHHHhCC-CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCc
Confidence 99999999873 35679999999999999999999999877777788999999999999999999988765544433322
Q ss_pred CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEcc-ccCCCCCccCChhHHHHHHHHHHhcCC
Q 013204 161 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDI 239 (447)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~ep-v~~~~G~~~~~~~~l~~l~~l~~~~g~ 239 (447)
......+++|.. +....+++++++.+... ++++++||+|| +++++|+++|+++||++|+++|++||+
T Consensus 168 ~~~~~~~~~~~~-----------d~~~~~~~~l~~~l~~~-~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~ 235 (423)
T PRK05964 168 LFEQVTAPFPPD-----------GYEQATLDALEALLEKH-AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGV 235 (423)
T ss_pred CCCCEEeCCCcc-----------hhHHHHHHHHHHHHHhC-CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCC
Confidence 222344444321 12234467888888643 46899999999 699999999999999999999999999
Q ss_pred EEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHH
Q 013204 240 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 319 (447)
Q Consensus 240 ~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~ 319 (447)
++|+||||+||||+|..++++++++.||++++||+++||++|+|++++++++++.+.... ..+.+.+++||++||++++
T Consensus 236 llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~-~~~~~~~~~T~~~np~~~a 314 (423)
T PRK05964 236 LLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDD-RAKAFMHSPSYTANPLACA 314 (423)
T ss_pred EEEEechhhCCCcCcchhHHHhcCCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCC-cccccccCCCCCcCHHHHH
Confidence 999999999999999988889999999999999999999789999999999999885310 1234467889999999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcC
Q 013204 320 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 399 (447)
Q Consensus 320 aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 399 (447)
++++++++++++++.+++.++++++++.|+++..++.+.++++.|+++++++.++... .....+.+.|+++|
T Consensus 315 aa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~--------~~~~~l~~~l~~~G 386 (423)
T PRK05964 315 AANASLDLFEDEPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVLE--------RDGPALRAFALERG 386 (423)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcch--------hHHHHHHHHHHHCC
Confidence 9999999998888999999999999999998855777778999999999998653210 12456888999999
Q ss_pred ceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 400 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 400 i~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
|++.+.++.+||+||+++|++|||+++++|+++++++
T Consensus 387 v~v~~~~~~lR~~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 387 VLLRPLGNTIYLMPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred eEEEecCCEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence 9999888899999999999999999999999999763
No 35
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.9e-66 Score=509.05 Aligned_cols=400 Identities=27% Similarity=0.480 Sum_probs=329.2
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
.+|+++++++|+++||.|||+||||.+++|+++|||+||+|.+|+.++++++.+. .....+++...++++++++.++..
T Consensus 37 ~~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~-~~~~~~~~~~~~la~~l~~~~p~~ 115 (443)
T PRK06058 37 TLPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHT-CFMVTPYEGYVAVAEQLNRLTPGD 115 (443)
T ss_pred CCCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCc-cccccCCHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999999999999999999999999999875432 222346788999999999987433
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCc-cccCCCCCCCCcceecCCCCc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 172 (447)
..++++|++||+||++.|||++|.+ +++++||.++++|||++.++++.++.. .++..+....+....++++..
T Consensus 116 ~~~~v~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (443)
T PRK06058 116 HEKRSALFNSGAEAVENAVKIARSY------TGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYP 189 (443)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHh------hCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcc
Confidence 3469999999999999999999988 456889999999999999999887642 344444433344444554443
Q ss_pred ccCCC-CCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCC
Q 013204 173 WRYAH-PGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 251 (447)
Q Consensus 173 ~~~~~-~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g 251 (447)
++... +....+.....+++.+++.+ .++++++||+||+++++|.++|+++||++|+++|++||+++|+|||++|||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfg 266 (443)
T PRK06058 190 YRDPKGLATDGEEAAARAITVIEKQV---GADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFA 266 (443)
T ss_pred cccccccccchHHHHHHHHHHHHHhh---CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 32110 01111222223344455444 246899999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh
Q 013204 252 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 331 (447)
Q Consensus 252 ~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~ 331 (447)
|+|..|+++++++.||++++||+++|| +|+|++++++++++.+. ...+++||++||++|++++++|+.++++
T Consensus 267 RtG~~fa~~~~gv~PDiv~~gK~l~~G-~Pi~av~~~~~i~~~~~-------~~~~~~T~~gnpl~~aaa~a~L~~~~~~ 338 (443)
T PRK06058 267 RTGAWFACEHEGIVPDLITTAKGIAGG-LPLSAVTGRAEIMDAPH-------PGGLGGTYGGNPVACAAALAAIETIEED 338 (443)
T ss_pred cChhhhHHHhcCCCCCEEEEcccccCC-CccEEEEEcHHHHhhcc-------CCCCCCCCCCCHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999988 79999999999998875 2357789999999999999999999889
Q ss_pred cHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC---C
Q 013204 332 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---D 407 (447)
Q Consensus 332 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g---~ 407 (447)
++.++++++++++++.|+++ .+++++.+++|.|+++++++..+.. .. ........+.+.|+++|+++.+.+ +
T Consensus 339 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~-~~---~~~~~~~~l~~~~~~~Gv~~~~~~~~~~ 414 (443)
T PRK06058 339 DLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGT-TE---PDAELTKALAAAAHAAGVIVLTCGTYGN 414 (443)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCC-CC---CcHHHHHHHHHHHHHCCeEEeccCCCCC
Confidence 99999999999999999998 5678999999999999999965421 11 112245668888999999998753 6
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 408 NIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 408 ~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
.+|+.||+++|+++|++++++|++++++
T Consensus 415 ~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 415 VIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred EEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999865
No 36
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=1.1e-65 Score=528.82 Aligned_cols=428 Identities=25% Similarity=0.345 Sum_probs=344.3
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCc----EEEeCCCC----EEEecCCccccccCC-CCCHHHHHHHHHHHhcCCccccc
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGS----YVYDVNGK----KYLDSLAGLWCTALG-GSEPRLVAAATAQLNTLPFYHSF 71 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~----~~~d~dg~----~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~ 71 (447)
+||||+++.......|.+|++++|. |++|.||+ +|||+++++|++++| |+||+|.+|+.++++++.+.+ +
T Consensus 325 iw~Pftq~~~~~~~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~-~ 403 (817)
T PLN02974 325 LWWPFTQHALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVM-F 403 (817)
T ss_pred ccCCcccccccCCCCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCccc-c
Confidence 6999999998765568999999999 99999998 999999999999999 689999999999999876553 2
Q ss_pred CcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHH-HHHHhcCCC------------CcceEEEEcCCCc
Q 013204 72 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW-YYNNALGRP------------NKKKFIARQKSYH 138 (447)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~-~~~~~~~~~------------~~~~vi~~~~~yh 138 (447)
....+++..+|+++|.+..+....++|+|++||+||||.|||+++ +++..+|++ ++.+||.+.++||
T Consensus 404 ~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYH 483 (817)
T PLN02974 404 PENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYH 483 (817)
T ss_pred CccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcC
Confidence 345789999999999995321236799999999999999999996 476665643 5789999999999
Q ss_pred cchhhhhcccCCccccCCCCCC--CCcceecCCCCcc-cC-----CCCC-----------------------CChhHHHH
Q 013204 139 GSTLIAASLSGLPALHQKFDLP--APFVLHTDCPHYW-RY-----AHPG-----------------------ETEEEYST 187 (447)
Q Consensus 139 g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~-----~~~~-----------------------~~~~~~~~ 187 (447)
|.+.+++++++.+.++..+..+ .+...+++.|..+ +. ..|. .+.+.+..
T Consensus 484 G~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~ 563 (817)
T PLN02974 484 GDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAK 563 (817)
T ss_pred CCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhhhH
Confidence 9999999999876555443111 1112223322211 00 0000 01223445
Q ss_pred HHHHHHHHHHHh----hCCCcEEEEEEccc-cCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccC
Q 013204 188 RLANNLEDLILK----EGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY 262 (447)
Q Consensus 188 ~~~~~le~~l~~----~~~~~~a~vi~epv-~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~ 262 (447)
.+++.+++.+.+ ..++++++||+||+ ++.||+++|+++|+++|+++|++||++||+|||+|||||+|+.|+++++
T Consensus 564 ~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~ 643 (817)
T PLN02974 564 AYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELL 643 (817)
T ss_pred HHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhc
Confidence 556778887764 34578999999996 8999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcH----HHHHH
Q 013204 263 SIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI----VEQVN 338 (447)
Q Consensus 263 ~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~----~~~~~ 338 (447)
|+.|||+|++|+|+||++|+|++++++++++.+... ...+.+.|++||++||++|++|+++|++++++++ .+..+
T Consensus 644 gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~-~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~ 722 (817)
T PLN02974 644 GCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGP-SKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGS 722 (817)
T ss_pred CCCCCEEeecccccCCCCccEEEEEcHHHHHhhccc-cccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 999999999999999988999999999999998532 1223567999999999999999999999988754 44555
Q ss_pred HHHHHHHHhH-hhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeCCEEEEecCCC
Q 013204 339 KIAPKFQDGV-KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSGDNIMMSPPFI 416 (447)
Q Consensus 339 ~~~~~l~~~L-~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g~~iR~~~~~~ 416 (447)
++++++++.| +.+.+++.+.++++.|+++++++.++... .++ ....+..+.+.++ ++|+++++.|+.||+.||+.
T Consensus 723 ~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~-~~~--~~~~a~~v~~~~~~~~Gl~~r~~Gnvi~l~pP~~ 799 (817)
T PLN02974 723 RLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSG-SGY--SSLYARSVVRRLRREDGIYARPLGNVVYLMCGPT 799 (817)
T ss_pred HHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcc-ccc--chHHHHHHHHHHHHhCCEEEEecCCEEEEeCCCC
Confidence 5556666677 45566899999999999999999764322 222 1224566788888 99999999899999999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q 013204 417 MSPEEVDELISKYGKAL 433 (447)
Q Consensus 417 ~t~e~i~~~~~~l~~~l 433 (447)
++++++++++++|.+.|
T Consensus 800 i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 800 TSPETCTRLLRKVYRRL 816 (817)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999998876
No 37
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-65 Score=505.41 Aligned_cols=407 Identities=27% Similarity=0.483 Sum_probs=340.1
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
..+|+++++++|+++||.|||+||||.+++|+.+|||+||+|.+|+.++++++...+. ....++...+++++|++.++.
T Consensus 22 ~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~lae~L~~~~p~ 100 (445)
T PRK08593 22 KYYPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTP-AYMYHEPLVRLAKKLCELAPG 100 (445)
T ss_pred CCCCceEEeeeeCEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccc-cccCCHHHHHHHHHHHHhCCC
Confidence 3468999999999999999999999999999999999999999999999988654332 134688999999999999743
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCc-cccCCCCCCCCcceecCCCC
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPH 171 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 171 (447)
...++|+|++||+|||+.|||++|.+ +++.+||.++++|||++.+++++++.. .++..+....+.+.++++|+
T Consensus 101 ~~~~~v~f~~SGseA~e~AiklAr~~------tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~ 174 (445)
T PRK08593 101 DFEKRVTFGLSGSDANDGIIKFARAY------TGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPD 174 (445)
T ss_pred CCCCEEEECCchHHHHHHHHHHHHHh------hCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCc
Confidence 22369999999999999999999987 567899999999999999999888743 23444544445566777776
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHhh-CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCC
Q 013204 172 YWRYAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250 (447)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~-~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~ 250 (447)
.++.+.... .+......++++++.+... .++++++||+||+++++|+++|+++||++|+++|++||++||+||||+||
T Consensus 175 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~ 253 (445)
T PRK08593 175 KYRGMYEEP-DANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGL 253 (445)
T ss_pred cccccccCC-cHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 654332222 2233444456777766542 34689999999999999999999999999999999999999999999999
Q ss_pred CccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh
Q 013204 251 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 330 (447)
Q Consensus 251 g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~ 330 (447)
||+|..++++++++.||++++||+++|| +|+|++++++++++.+.. ..+.+|++++|++|++++++|+++++
T Consensus 254 GrtG~~~a~~~~gv~pDi~t~gK~l~~G-~p~gav~~~~~i~~~~~~-------~~~~~T~~~~pl~~aaa~a~l~~l~~ 325 (445)
T PRK08593 254 GRTGKWSSISHFNITPDLMSFGKSLAGG-MPMSAIVGRKEIMESLEA-------PAHLFTTGANPVSCAAALATIDMIED 325 (445)
T ss_pred CcCchHHHHHhcCCCCCEeeecccccCC-cccEEEEEcHHHHhhhcc-------CCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 9999988899999999999999999998 799999999999998852 24567999999999999999999998
Q ss_pred hcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-CCE
Q 013204 331 RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDN 408 (447)
Q Consensus 331 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-g~~ 408 (447)
+++.+++++++++|++.|+++ .+++.+.+++|.|+++++++..+..... + .......+.+.|+++||++.+. ++.
T Consensus 326 ~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~--~-~~~~~~~~~~~~~~~Gv~~~~~~~~~ 402 (445)
T PRK08593 326 ESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKT--R-DNEAALKICNYCFEHGVVIIAVAGNV 402 (445)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCC--C-cHHHHHHHHHHHHHCCeEEeccCCCE
Confidence 899999999999999999998 6789999999999999999875322111 1 1123566888999999999764 478
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 409 IMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 409 iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
+||+||+.+|++||++++++|+++++++..
T Consensus 403 lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 403 LRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred EEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999988754
No 38
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.4e-66 Score=454.80 Aligned_cols=382 Identities=31% Similarity=0.505 Sum_probs=334.0
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
.+.|+++.+++|+++||.+|++|+||.+++++.+-||+||.|.++++++++++...++. ++.+...++++.+..+|
T Consensus 39 hpLpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssra--fYnd~~~~f~~~vt~lf-- 114 (427)
T KOG1402|consen 39 HPLPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSRA--FYNDVLGEFAEYVTKLF-- 114 (427)
T ss_pred CcCceEEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhHH--HhhhhHHHHHHHHHHhc--
Confidence 45789999999999999999999999999999999999999999999999986554443 36778889999999997
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHh-cC-CCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCc-ceecCC
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNA-LG-RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPF-VLHTDC 169 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~-~~-~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 169 (447)
+.++|+-.++|.||+|.|+|++|.+... ++ .+.+.+|+...++|||.+.++++.+..+.-...++++.+. +..+++
T Consensus 115 -~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y 193 (427)
T KOG1402|consen 115 -GYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY 193 (427)
T ss_pred -CcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc
Confidence 6778999999999999999999854322 22 2345678888999999999999999887667778877776 556665
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcC
Q 013204 170 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 249 (447)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g 249 (447)
.+ +++|+..+.. +.++++|+||+|+++|.++|+++||+.+++||++|++++|.||||||
T Consensus 194 ~d------------------~eale~~l~~---~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTG 252 (427)
T KOG1402|consen 194 GD------------------AEALEVALKS---PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTG 252 (427)
T ss_pred CC------------------HHHHHHHhcC---CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhc
Confidence 43 4788888773 68999999999999999999999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh
Q 013204 250 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK 329 (447)
Q Consensus 250 ~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~ 329 (447)
+||+|+.+++++.++.||++.++|+++||.+|++++++++++|..+. +..|++||.+||++++++.|+|+++.
T Consensus 253 l~RTGk~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~-------pgeHgsTyggNpLg~~vaiAalevi~ 325 (427)
T KOG1402|consen 253 LARTGKLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIK-------PGEHGSTYGGNPLGCAVAIAALEVIV 325 (427)
T ss_pred ccccCcEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccC-------CCccccccCCChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998876 55799999999999999999999999
Q ss_pred hhcHHHHHHHHHHHHHHhHhhc-cCCC-ceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-
Q 013204 330 ERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG- 406 (447)
Q Consensus 330 ~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g- 406 (447)
++++.++..+++..|+.+|+++ .+.| ++..++|.|++.++.+...+.... .+..++-.|.++|++.-|..
T Consensus 326 eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~-------~aw~~cl~lk~~g~LAkptH~ 398 (427)
T KOG1402|consen 326 EEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQ-------DAWDVCLALKENGLLAKPTHG 398 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccccch-------hHHHHHHcccccccccCCCCC
Confidence 9999999999999999999999 4554 678999999999998875443211 24557778889999988764
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 407 DNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 407 ~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
+.|||.||+.++++|+++.++++++++.
T Consensus 399 ~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 399 NIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred CeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 6799999999999999999999998763
No 39
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-64 Score=496.73 Aligned_cols=401 Identities=33% Similarity=0.564 Sum_probs=334.8
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
.+|+++++++|+++||.|||+||||.+++|+.++||+||+|.+|+.++++++...+. ....+++..+++++|++..+..
T Consensus 35 ~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~lAe~L~~~~p~~ 113 (441)
T PRK05769 35 WYPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSL-TDFYYEPAVELAERLVEIAPGG 113 (441)
T ss_pred CCCeeEEecceEEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccC-cccCCHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999999999999999999999999999987543321 1246788999999999987433
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCC-ccccCCCCCCCCcceecCCCCc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
..++++|++||+|||+.|||+++.+ +++++||.++++|||++.++++.++. +.++..+....+.+.++++|+.
T Consensus 114 ~~~~v~f~~SGsEA~e~AlklAr~~------tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (441)
T PRK05769 114 FEKKVFFTNSGTESNEAAIKIARYH------TGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNP 187 (441)
T ss_pred CCCEEEECCchHHHHHHHHHHHHHH------hCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCcc
Confidence 3579999999999999999999988 45789999999999999999988764 3344445444555667777765
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHH-Hh-hCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCC
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLI-LK-EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l-~~-~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~ 250 (447)
++.+....+.+.....+++.+++.+ .. ..++++++||+||+++++|+++|+++||++|+++|++||+++|+|||++||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~ 267 (441)
T PRK05769 188 YRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGM 267 (441)
T ss_pred ccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 5433221233344445567788744 32 245689999999999999999999999999999999999999999999999
Q ss_pred CccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh
Q 013204 251 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 330 (447)
Q Consensus 251 g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~ 330 (447)
||+|..++++++++.||++++||++++| +|+|++++++++++.+ ...+++||+++|+++++++++|+++++
T Consensus 268 gr~G~~~a~~~~gv~pDivt~~K~l~~G-~p~gav~~~~~i~~~~--------~~~~~~T~~g~p~~~aaa~a~L~~l~~ 338 (441)
T PRK05769 268 GRTGKMFAIEHFGVEPDIITLAKAIAGG-LPLGAVIGRAELMFLP--------PGSHANTFGGNPVAAAAALATLEELEE 338 (441)
T ss_pred CcccceehhhccCCCCCEEEEcccccCC-cccEEEEEehhhhhcC--------CCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 9999988999999999999999999998 8999999999987543 224678999999999999999999988
Q ss_pred hcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CE
Q 013204 331 RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DN 408 (447)
Q Consensus 331 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~ 408 (447)
++.+++++++++|++.|+++ .+++.+..++|.|+++++++.++.. .+ .......+.+.|+++|+++.+.+ +.
T Consensus 339 -~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~--~~---~~~~~~~~~~~~~~~Gil~~~~~~~~ 412 (441)
T PRK05769 339 -GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRK--EP---DPKLRDKVLYEAFKRGLLLLGAGKSA 412 (441)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCc--cc---cHHHHHHHHHHHHhCCcEEecCCCCE
Confidence 99999999999999999998 5688889999999999999965421 10 11235567888999999998766 67
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 409 IMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 409 iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
+||+||+++|++||++++++|++++.++
T Consensus 413 lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 413 IRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998753
No 40
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-64 Score=493.56 Aligned_cols=396 Identities=25% Similarity=0.430 Sum_probs=333.0
Q ss_pred CCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCC
Q 013204 15 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 94 (447)
Q Consensus 15 ~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 94 (447)
.|+++++++|+++||.|||+||||.+++++.+|||+||+|.+|+.++++++.+... ...+++...++++++++.++...
T Consensus 22 ~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-~~~~~~~~~~la~~l~~~~p~~~ 100 (425)
T PRK07495 22 TQIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCH-QVVPYENYVRLAERLNALVPGDF 100 (425)
T ss_pred CCeeEEeeeecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCccc-CccCCHHHHHHHHHHHHhCCCCC
Confidence 48999999999999999999999999999999999999999999999988643321 23467889999999999874322
Q ss_pred CCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCC-ccccCCCCCCCCcceecCCCCcc
Q 013204 95 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYW 173 (447)
Q Consensus 95 ~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
.++++|++||+|||+.|||+++.+ +++.+||.|+++|||++.+++++++. ..++..+....+.+.++++|+.+
T Consensus 101 ~~~v~f~~SGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (425)
T PRK07495 101 AKKTIFVTTGAEAVENAVKIARAA------TGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL 174 (425)
T ss_pred CCEEEECCchHHHHHHHHHHHHHh------hCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc
Confidence 369999999999999999999987 55788999999999999999888775 34555555444555667776543
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHh-hCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCc
Q 013204 174 RYAHPGETEEEYSTRLANNLEDLILK-EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 252 (447)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~le~~l~~-~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~ 252 (447)
+. .+ ...+++++++.+.. ..++++++||+||+++++|.++++++|+++|+++|++||+++|+||||+||||
T Consensus 175 ~g----~~----~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr 246 (425)
T PRK07495 175 HG----VS----VEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFAR 246 (425)
T ss_pred cc----cc----HHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCc
Confidence 21 11 12335667777753 34568999999999999998999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhc
Q 013204 253 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 332 (447)
Q Consensus 253 ~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~ 332 (447)
+|..|+++++++.||++++||++++| +|+|++++++++++.+.. ..+.+||+++|+++++++++++++++++
T Consensus 247 ~G~~~a~~~~gv~pDi~tlsK~l~~G-~pigav~~~~~i~~~~~~-------~~~~~T~~~~pl~~aaa~a~l~~l~~~~ 318 (425)
T PRK07495 247 TGKLFAMEHHEVAADLTTMAKGLAGG-FPLAAVTGRAEIMDAPGP-------GGLGGTYGGNPLGIAAAHAVLDVIEEED 318 (425)
T ss_pred CCCceeecccCCCCCEEeehhhhcCC-ccceEEEEcHHHHhccCC-------CCcCCCCCCCHHHHHHHHHHHHHHHhch
Confidence 99988899999999999999999998 799999999999988752 2466899999999999999999999889
Q ss_pred HHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee---CCE
Q 013204 333 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDN 408 (447)
Q Consensus 333 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---g~~ 408 (447)
+.++++++++++++.|+++ ..++.+.++++.|+++++++.+... ..+ .......+.+.|+++|+++... ++.
T Consensus 319 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~-~~~---~~~~~~~~~~~~~~~Gvl~~~~g~~~~~ 394 (425)
T PRK07495 319 LCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDADS-GLP---SAEFANRVRLKALEKGLILLTCGVHGNV 394 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCCC-CCc---cHHHHHHHHHHHHHCCeEEeecCCCCCE
Confidence 9999999999999999998 5678889999999999999965321 111 1123566888899999999765 378
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 409 IMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 409 iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
+||.||+++|++++|+++++|++++++++
T Consensus 395 ~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 395 IRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred EEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998764
No 41
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=6.9e-64 Score=488.17 Aligned_cols=384 Identities=31% Similarity=0.530 Sum_probs=330.2
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
.++|+++++++|+|+||.|||+||||.++++++++||+||+|.+|+.++++++.+... ...+++..+++++|++..+
T Consensus 20 ~~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~la~~L~~~~~- 96 (408)
T PRK04612 20 RPRQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSN--VFYSAPPLKLAEELVTASR- 96 (408)
T ss_pred CCCCceEEEeeeCEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccc--ccCCHHHHHHHHHHHhhCC-
Confidence 3678999999999999999999999999999999999999999999999987644322 2357888999999999863
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCC-CCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCC
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGR-PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 171 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~-~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (447)
..++++|++||+|||+.|||+++.++..+|+ +++.+||.|+++|||++.++++.++.+.++..+......+..+++++
T Consensus 97 -~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d 175 (408)
T PRK04612 97 -FAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFND 175 (408)
T ss_pred -CCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCC
Confidence 2379999999999999999999998766664 35678999999999999999998887766665543333334444432
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCC
Q 013204 172 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 251 (447)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g 251 (447)
.+.+++.+. ++++++||+||++++||++.++++|+++|+++|++||+++|+||||+|||
T Consensus 176 ------------------~~~l~~~~~---~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 234 (408)
T PRK04612 176 ------------------VEALEAAMA---GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMG 234 (408)
T ss_pred ------------------HHHHHHhhC---CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 366777664 46899999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh
Q 013204 252 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 331 (447)
Q Consensus 252 ~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~ 331 (447)
++|..++...+++.||++++||++++| +|+|++++++++++.+.. ..+++||+++|++++++.++|+.++++
T Consensus 235 r~G~~~a~~~~~~~pdi~t~~K~l~~G-~piga~~~~~~~~~~~~~-------~~~~~t~~~~p~~~aaa~a~L~~~~~~ 306 (408)
T PRK04612 235 RTGTLFAHWQEQVTPDIVTLAKALGGG-FPIGAMLAGPKVAETMQF-------GAHGTTFGGNPLAAAVARVALRKLASP 306 (408)
T ss_pred cCCchhhhhhcCCCCCEEEEcchhcCC-CceEEEEECHHHHhhhcC-------CCcCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 999888877789999999999999988 899999999998887752 246679999999999999999999989
Q ss_pred cHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEE
Q 013204 332 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNI 409 (447)
Q Consensus 332 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~i 409 (447)
++.++++++++++++.|+++ .+++.+.+++|.|+++++++..+.. .....+.+.|+++|+++.+.+ +.+
T Consensus 307 ~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~---------~~a~~i~~~l~~~Gvlv~~~g~~~l 377 (408)
T PRK04612 307 QIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHA---------GQAGAILDLAAEHGLLLLQAGPDVL 377 (408)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchh---------hHHHHHHHHHHHCCeEEeeCCCCEE
Confidence 99999999999999999998 6678999999999999999863211 124568888999999998877 789
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 410 MMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 410 R~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
|+.||+.+|++||++++++|++++.++.+
T Consensus 378 Rl~Ppl~it~eeid~~l~~l~~~l~~~~~ 406 (408)
T PRK04612 378 RFVPALNLTDAELADGLARLRLALADYVA 406 (408)
T ss_pred EEcCCccCCHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999987654
No 42
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4e-63 Score=489.70 Aligned_cols=400 Identities=31% Similarity=0.519 Sum_probs=335.2
Q ss_pred CeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCC
Q 013204 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKM 95 (447)
Q Consensus 16 ~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 95 (447)
|+++++++|+++||.|||+||||.+++++++|||+||+|.+|+.++++++...+. ....++...++++++++.++ ...
T Consensus 26 ~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~-~~~~~~~~~~la~~L~~~~~-~~~ 103 (433)
T PRK08117 26 NLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPS-GVIYYESILKLAEELAEITP-GGL 103 (433)
T ss_pred CceEEeeeeeEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccc-cccCCHHHHHHHHHHHHhCC-CCC
Confidence 4899999999999999999999999999999999999999999999987644332 12467889999999999973 356
Q ss_pred CeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCC-ccccCCCCCCCCcceecCCCCccc
Q 013204 96 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYWR 174 (447)
Q Consensus 96 ~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 174 (447)
++++|++||+|||+.|||+++.+ +++++||.++++|||++.++++.++. +.++..+....+.+.++++|+.++
T Consensus 104 ~~v~f~~SGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (433)
T PRK08117 104 DCFFFSNSGAEAIEGALKLAKHV------TKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDR 177 (433)
T ss_pred CEEEEeCcHHHHHHHHHHHHHHh------cCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCcccc
Confidence 79999999999999999999987 56789999999999999999877764 334444444345556677765443
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHh-hCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcc
Q 013204 175 YAHPGETEEEYSTRLANNLEDLILK-EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 253 (447)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~le~~l~~-~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~ 253 (447)
.+.. ...+.+..++++++++++.. ..++++++||+||+++++|+++|+++||++|+++|++||++||+||||+||||+
T Consensus 178 ~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~ 256 (433)
T PRK08117 178 CPKG-EDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRT 256 (433)
T ss_pred cccc-CchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcc
Confidence 2211 12234455677888888764 234679999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcH
Q 013204 254 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 333 (447)
Q Consensus 254 g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~ 333 (447)
|..++.+++++.||++++||++++| +|+|++++++++++.+. ...+++|++++|+++++++++|+.++++++
T Consensus 257 G~~~~~~~~gv~pDi~t~sK~lg~G-~pigav~~~~~i~~~~~-------~~~~~~T~~~np~~~aaa~a~L~~l~~~~l 328 (433)
T PRK08117 257 GEWFAAQTFGVVPDIMTIAKGIASG-LPLSAVVASKELMEQWP-------LGSHGTTFGGNPVACAAALATLEVIKEEKL 328 (433)
T ss_pred ccchhHhhcCCCCCEeehhhhccCC-CcceeEEEcHHHHhhcc-------CCCCCCCCCcCHHHHHHHHHHHHHHHhccH
Confidence 9988888899999999999999988 79999999999998874 235677999999999999999999988889
Q ss_pred HHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC---CEE
Q 013204 334 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNI 409 (447)
Q Consensus 334 ~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g---~~i 409 (447)
.++++++++++++.|+++ ..++.+.++++.|.++++++.++... + .......+.+.++++|+++.+.+ +.+
T Consensus 329 ~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~--~---~~~~~~~~~~~l~~~Gv~~~~~g~~~~~l 403 (433)
T PRK08117 329 LDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGE--P---DGDAVEKILDKCLEKGLLFYLCGNAGNVL 403 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCC--c---chHHHHHHHHHHHHCCCEEeecCCCCCEE
Confidence 999999999999999988 56788889999999999999754311 0 11234567888999999987653 689
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 410 MMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 410 R~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
|++||+.+|+++|++++++|+++++++.
T Consensus 404 Rl~p~~~~t~~~i~~~~~~l~~~l~~~~ 431 (433)
T PRK08117 404 RMIPPLTVTKEEIDEGLDILDEALTEYE 431 (433)
T ss_pred EEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998764
No 43
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-62 Score=483.36 Aligned_cols=404 Identities=28% Similarity=0.497 Sum_probs=335.5
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
.+|+++++++|+++||.|||+||||.+++++++|||+||+|.+|+.++++++...+.. ...+++..+++++|++..+ .
T Consensus 22 ~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~la~~L~~~~p-~ 99 (443)
T PRK08360 22 YYPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPI-YGFPVEPLLLAEKLIEIAP-G 99 (443)
T ss_pred cCCceEEecceeEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCcccc-ccCcHHHHHHHHHHHHhCC-C
Confidence 5689999999999999999999999999999999999999999999999886544322 2357888999999999873 3
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCc-cccCCCCCCCCcceecCCCCc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 172 (447)
..++++|++||+||++.|||+++.+ +++++|+.+.++|||++.++++.++.. .++..++. .+.+.++++|+.
T Consensus 100 ~~~~v~f~~sGsEAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~-~~~~~~~~~~~~ 172 (443)
T PRK08360 100 DNPKVSFGLSGSDANDGAIKFARAY------TKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGE-LSDVHYIPYPDC 172 (443)
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHHh------cCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCC-CCCcEEEeCCcc
Confidence 4579999999999999999999988 567899999999999999998887743 33444444 344556666654
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHhh-CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCC
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 251 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~~-~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g 251 (447)
.+.+.. ...+.....+++.+++.+... .++++++||+||+++++|.++++++|+++|.++|++||+++|+||||+|||
T Consensus 173 ~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 251 (443)
T PRK08360 173 YRCPFG-KEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLG 251 (443)
T ss_pred cccccc-CchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 432221 111233334556677777542 346899999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh
Q 013204 252 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 331 (447)
Q Consensus 252 ~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~ 331 (447)
++|..++++++++.||++++||++++| +|+|++++++++++.+. ...+.+|++++|+++++++++|+.++++
T Consensus 252 r~G~~~a~~~~~~~pDiitlsK~l~~G-~pigav~~~~~i~~~~~-------~~~~~~T~~~~p~~~aaa~a~l~~l~~~ 323 (443)
T PRK08360 252 RTGKWFAIEHFGVEPDIITLGKPLGGG-LPISATIGRAEIMDSLP-------PLAHAFTLSGNPVASAAALAVIEEIEEK 323 (443)
T ss_pred cCccchhhhhcCCCCCEEEecccccCC-ceeEEEEEcHHHHhhhc-------CCCCCCCCCcCHHHHHHHHHHHHHHHHc
Confidence 999888888889999999999999988 89999999999998885 2346679999999999999999999888
Q ss_pred cHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-CCEE
Q 013204 332 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNI 409 (447)
Q Consensus 332 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-g~~i 409 (447)
++.++++++++++++.|+++ .+++++.++++.|+++++++.++.....+ ....+..+.+.|+++|+++.+. ++.+
T Consensus 324 ~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~---~~~~~~~~~~~l~~~Gi~~~~~~~~~l 400 (443)
T PRK08360 324 NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKER---AYEEAAKVVWRAWELGLIVTFFSGNVL 400 (443)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCc---cHHHHHHHHHHHHHCCeEEeecCCCEE
Confidence 99999999999999999988 56788899999999999999754322111 1113456888899999998764 5789
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 410 MMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 410 R~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
||+||+.+|+++|++++++|+++++.+++
T Consensus 401 r~~P~l~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 401 RIQPPLTIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999988764
No 44
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=9.4e-63 Score=484.78 Aligned_cols=401 Identities=26% Similarity=0.456 Sum_probs=332.7
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
.++|+++++++|+++||.|||+||||.+++++.++||+||+|.+|+.++++++.... ....++++..++++++++..+.
T Consensus 13 ~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~-~~~~~~~~~~~la~~l~~~~p~ 91 (420)
T TIGR00700 13 VTLPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTC-FMVTPYEGYVALAEKLNRIAPG 91 (420)
T ss_pred CCCCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCcc-ccccCChHHHHHHHHHHHhCCC
Confidence 457899999999999999999999999999999999999999999999998764322 1124677889999999998743
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCc-cccCCCCCCCCcceecCCCC
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPH 171 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 171 (447)
.+.++++|++||+||++.|||+++.+ +++++||.|+++|||++.+++++++.. .++..++...+...++++|+
T Consensus 92 ~~~~~v~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (420)
T TIGR00700 92 SGPKKSVFFNSGAEAVENAVKIARSY------TGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPY 165 (420)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHh------cCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCc
Confidence 44579999999999999999999988 567889999999999999999887753 34555554444556667665
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHH-hhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCC
Q 013204 172 YWRYAHPGETEEEYSTRLANNLEDLIL-KEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250 (447)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~le~~l~-~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~ 250 (447)
.++.... .....+ ..+++.+++.+. ...++++++||+||+++++|.++++++|+++|+++|++||+++|+||||+||
T Consensus 166 ~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~ 243 (420)
T TIGR00700 166 PYRDGLL-DKQLST-DGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGF 243 (420)
T ss_pred ccccccc-ccchhH-HHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCC
Confidence 4432211 111122 234567777764 2345789999999999999999999999999999999999999999999999
Q ss_pred CccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh
Q 013204 251 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 330 (447)
Q Consensus 251 g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~ 330 (447)
||+|..++++++++.||++++||++++| +|+|++++++++++.+. ...+.+|++++|++|++++++|+.+++
T Consensus 244 gr~g~~~a~~~~~~~pDi~~lsK~l~~G-~pig~v~~~~~i~~~~~-------~~~~~~T~~~~pl~~aaa~a~l~~l~~ 315 (420)
T TIGR00700 244 ARTGAMFACEHEGPEPDLITTAKSLADG-LPLSGVTGRAEIMDAPA-------PGGLGGTYAGNPLACAAALAVLAIIES 315 (420)
T ss_pred cccchhHHHhhcCCCCCEEEeeccccCC-cceEEEEecHHHHhhcC-------CCCcCCCCCcCHHHHHHHHHHHHHHHh
Confidence 9999988888899999999999999988 89999999999998875 224678999999999999999999988
Q ss_pred hcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee---C
Q 013204 331 RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---G 406 (447)
Q Consensus 331 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---g 406 (447)
+++.++++++++++++.|+++ ..++.+..+++.|+++++++.+... .. + .......+.+.|+++||++.++ +
T Consensus 316 ~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~-~~--~-~~~~~~~l~~~~~~~Gv~i~p~~~f~ 391 (420)
T TIGR00700 316 EGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELVDPGT-TE--P-DAGLAERIATAAHAAGLLLLTCGMFG 391 (420)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhhCCCEEEeeccceEEEEEEecCCC-CC--c-cHHHHHHHHHHHHHCCeEEeccCCCC
Confidence 899999999999999999988 5678888999999999998864311 11 1 1224566788889999999886 3
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 407 DNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 407 ~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
+.+||+||+++++++|++++++|++++.
T Consensus 392 ~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 392 NIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred CEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 6899999999999999999999999874
No 45
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=1.3e-63 Score=465.43 Aligned_cols=400 Identities=27% Similarity=0.380 Sum_probs=326.2
Q ss_pred CCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHH
Q 013204 2 LAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLD 81 (447)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~ 81 (447)
+.|-..+|... .+|+++++++|+++||+|||+|+||+++|+...|||+||.|.+|++++++++.. ++.|++...+
T Consensus 23 nspvra~~~v~-~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~----fg~Pte~Ei~ 97 (432)
T COG0001 23 NSPVRAFKSVG-GYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLS----FGAPTELEVE 97 (432)
T ss_pred CccccccCCCC-CCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcCC----CCCCCHHHHH
Confidence 34555555553 699999999999999999999999999999999999999999999999998643 2669999999
Q ss_pred HHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCC----C
Q 013204 82 LAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK----F 157 (447)
Q Consensus 82 l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~----~ 157 (447)
+++.+++.++ ..++|.|+||||||++.|||++|.+ ++|++||.|+++|||+....+...++..-..+ .
T Consensus 98 ~Aell~~~~p--~~e~vrfvnSGTEAtmsAiRlARa~------TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~ 169 (432)
T COG0001 98 LAELLIERVP--SIEKVRFVNSGTEATMSAIRLARAY------TGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSP 169 (432)
T ss_pred HHHHHHHhcC--cccEEEEecchhHHHHHHHHHHHHh------hCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCC
Confidence 9999999974 4579999999999999999999988 78999999999999997555553332111000 0
Q ss_pred CCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhc
Q 013204 158 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY 237 (447)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~ 237 (447)
+++.....++ -.+..|+++.+++++...+ +++|+||+||+.++.|+++|+++||+.|+++|++|
T Consensus 170 Gvp~~~a~~t---------------i~~~yND~~al~~~~~~~g-~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~ 233 (432)
T COG0001 170 GVPADVAKHT---------------LVLPYNDLEALEEAFEEYG-DDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEH 233 (432)
T ss_pred CCChhhhccE---------------EEecCCCHHHHHHHHHHcC-CcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHc
Confidence 1111110000 0112234578888887643 68999999999999999999999999999999999
Q ss_pred CCEEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHH
Q 013204 238 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS 317 (447)
Q Consensus 238 g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 317 (447)
|++||+|||+||| |.+..++..++|++||+.|+||.++|| +|+|++.+++++|+.+.. .+...+.+|+++||++
T Consensus 234 G~lLI~DEViTGF-R~~~gGaq~~~gi~PDlttlGKiIGGG-lP~ga~gGr~eiM~~~~p----~g~vyqaGT~sgnpla 307 (432)
T COG0001 234 GALLIFDEVITGF-RVALGGAQGYYGVEPDLTTLGKIIGGG-LPIGAFGGRAEIMEQLAP----LGPVYQAGTLSGNPLA 307 (432)
T ss_pred CcEEEEecchhhc-ccCCcccccccCcCcchhhhhhhhcCC-cceeeeccHHHHHhhhCC----CCCccccCCCCCcHHH
Confidence 9999999999999 888888999999999999999999999 799999999999998864 4567788999999999
Q ss_pred HHHHHHHHHHHhh-hcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCC--CCCcchHHHHHH
Q 013204 318 CAVAIEALKIYKE-RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPF--PPEWGIGAYFGA 393 (447)
Q Consensus 318 ~~aa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~ 393 (447)
++|+.++|+.+.+ +..++++.+++++|++.|+++ .++.+...+...|.++.+.|.+....+... ..+......+.+
T Consensus 308 maAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~ 387 (432)
T COG0001 308 MAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFH 387 (432)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHH
Confidence 9999999999887 458999999999999999987 677788889999999999988743211110 011122344556
Q ss_pred HHHHcCceEEeeC-CEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 394 QCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 394 ~l~~~Gi~~~~~g-~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
.|+++||++.|.. +..-+| ..||+++|++++++++++++++.+
T Consensus 388 ~~l~~GV~l~ps~~ea~flS--~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 388 HLLNRGVYLAPSQFEAGFLS--TAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred HHHhCCcccCCccccceeee--cccCHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999886 556777 789999999999999999887653
No 46
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1e-62 Score=483.34 Aligned_cols=394 Identities=25% Similarity=0.431 Sum_probs=328.1
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
.+|+++++++|+++||.|||+||||.+++++.+|||+||+|.+|+.++++++.... ....++++..++++++++..+..
T Consensus 21 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~-~~~~~~~~~~~la~~l~~~~p~~ 99 (421)
T PRK06777 21 MCDFYAERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTA-YQIVPYASYVTLAERINALAPID 99 (421)
T ss_pred CCCeeEEeeecCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhccccc-ccccCChHHHHHHHHHHHhCCCC
Confidence 45899999999999999999999999999999999999999999999999864322 11246788899999999987433
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCc-cccCCCCCCCCcceecCCCCc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 172 (447)
+.++++|++||+||++.|||+++.+ +++++||.|+++|||++.+++++++.. .++..+......+.++++|+.
T Consensus 100 ~~~~~~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~ 173 (421)
T PRK06777 100 GPAKTAFFTTGAEAVENAVKIARAY------TGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNE 173 (421)
T ss_pred CCceEEEeCCcHHHHHHHHHHHHHh------hCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcc
Confidence 4679999999999999999999987 567889999999999999999887752 344444333334455555543
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHh-hCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCC
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILK-EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 251 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~-~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g 251 (447)
... .. ...+++++++++.. ..++++++||+||+++++|..+++++|+++|+++|++||+++|+||||+|||
T Consensus 174 ~~~----~~----~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~g 245 (421)
T PRK06777 174 LHG----VS----VEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFA 245 (421)
T ss_pred ccC----cC----HHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCc
Confidence 210 00 12345677877754 2457899999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh
Q 013204 252 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 331 (447)
Q Consensus 252 ~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~ 331 (447)
|+|..++++++++.||++++||++++| +|+|++++++++++.+.. ..+.+|++++|++|++++++|+.++++
T Consensus 246 r~g~~~~~~~~~~~pDiv~~sK~l~~G-~pigav~~~~~i~~~~~~-------~~~~~T~~~~p~~~aaa~a~L~~~~~~ 317 (421)
T PRK06777 246 RTGKLFAMEYYDVKPDLITMAKSLGGG-MPISAVVGRAEVMDAPAP-------GGLGGTYAGNPLAVAAALAVLDVIAEE 317 (421)
T ss_pred cCCchhhhhhcCCCCCEEeeehhhcCC-CceEEEEEcHHHHhccCC-------CCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 999988889999999999999999987 899999999999988752 246679999999999999999999888
Q ss_pred cHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC---C
Q 013204 332 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---D 407 (447)
Q Consensus 332 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g---~ 407 (447)
++.++++++++++++.|+++ .+++.+.++++.|+++++++..+.. .. ....+...+.+.++++||++.+++ +
T Consensus 318 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~-~~---~~~~~~~~l~~~~~~~Gv~i~~~~~~g~ 393 (421)
T PRK06777 318 KLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQT-GK---PSPEFTRQYQRQALEEGLLLLSCGVHGN 393 (421)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCcc-CC---ccHHHHHHHHHHHHhCCeEEeecCCCCC
Confidence 99999999999999999998 5678889999999999998864321 11 112245667788899999998864 6
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 408 NIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 408 ~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
.+||.||+++++++|++++++|++++.
T Consensus 394 ~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 394 VIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 899999999999999999999998874
No 47
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=2.8e-62 Score=480.20 Aligned_cols=410 Identities=30% Similarity=0.518 Sum_probs=339.9
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+|+||...+. ...++.+++++|+++||.|||+||||.+++++.+|||+||+|.+++.++++++..... ...+++...
T Consensus 15 ~~~~~~~~~~--~~~~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~-~~~~~~~~~ 91 (427)
T TIGR00508 15 IWHPYTSMSS--PLPVYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMF-GGFTHKPAI 91 (427)
T ss_pred cccCccCccc--cCCCceEEeeeeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc-cccCCHHHH
Confidence 4777766642 2235678999999999999999999999999999999999999999999988643321 124678899
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCc-cccCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDL 159 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~-~~~~~~~~ 159 (447)
++++++++.+ +.+.++++|++||+||++.|+|+++.++..++.+++.+||.|.++|||++.++++.++.. .++..+..
T Consensus 92 ~la~~l~~~~-~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~ 170 (427)
T TIGR00508 92 ELCQKLVKMT-PNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKG 170 (427)
T ss_pred HHHHHHHhhC-CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccc
Confidence 9999999987 345689999999999999999999998777777778999999999999999999887742 23333332
Q ss_pred CCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccc-cCCCCCccCChhHHHHHHHHHHhcC
Q 013204 160 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYD 238 (447)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv-~~~~G~~~~~~~~l~~l~~l~~~~g 238 (447)
..+....+++|.. ++ ...+.+++++++++++... ++++++||+||+ +++||.++++.+||++|+++|++||
T Consensus 171 ~~~~~~~~~~p~~-~~------~~~~~~~~~~~l~~~l~~~-~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~ 242 (427)
T TIGR00508 171 YLPEQIFAPAPQN-RF------DEEWNEEAITPLAKLMELH-SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYD 242 (427)
T ss_pred cCCCCeEcCCCCc-cc------cchhHHHHHHHHHHHHHhc-CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence 2223334444321 00 0123455678888888643 457999999998 9999999999999999999999999
Q ss_pred CEEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHH
Q 013204 239 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC 318 (447)
Q Consensus 239 ~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~ 318 (447)
+++|+||||+|+||+|..|+++++++.||++++||+++||++|++++++++++++.+.... ...+.+++||.++|+++
T Consensus 243 ~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~--~~~~~~~~T~~g~p~~~ 320 (427)
T TIGR00508 243 ILLIADEIATGFGRTGKLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGE--AGCFMHGPTFMGNPLAC 320 (427)
T ss_pred CEEEEeccccCCCcCCccchhhhcCCCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCC--CCccccCCCCCcCHHHH
Confidence 9999999999999999999999999999999999999999779999999999999886321 12345778999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHc
Q 013204 319 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH 398 (447)
Q Consensus 319 ~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 398 (447)
++++++|++++++++.+++++++++|++.|+++..++.+..+++.|+++++.+.++. ....+.++|+++
T Consensus 321 aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~-----------~~~~~~~~l~~~ 389 (427)
T TIGR00508 321 AVAEASLAILLEGEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPV-----------NVEELQKKFVEQ 389 (427)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCcc-----------CHHHHHHHHHHC
Confidence 999999999988899999999999999999998556667789999999999996432 134688899999
Q ss_pred CceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 399 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 399 Gi~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
||++.+.++.+|++||+++|++|||+++++|++++.+
T Consensus 390 Gv~~~~~~~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 390 GVWIRPFGKLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred CeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 9999988888999999999999999999999999864
No 48
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=1.2e-62 Score=481.17 Aligned_cols=379 Identities=31% Similarity=0.555 Sum_probs=324.9
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
.+|+++++++|+++||.|||+||||.+++++++|||+||+|.+|+.++++++..... ..++++..++++++++..
T Consensus 16 ~~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~L~~~~--- 90 (397)
T TIGR03246 16 PAPFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGN--GYTNEPVLRLAKKLVDAT--- 90 (397)
T ss_pred CCCceEEEeecCEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccC--ccCCHHHHHHHHHHHhhC---
Confidence 578999999999999999999999999999999999999999999999987432221 346788999999999986
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 173 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
+.++++|++||+|||+.|||+++.++..++.+++++||.++++|||++.++++.++.+.++..+.........+++++
T Consensus 91 ~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-- 168 (397)
T TIGR03246 91 FADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYND-- 168 (397)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCC--
Confidence 346999999999999999999998876554457889999999999999999888887655554443333333344332
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcc
Q 013204 174 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 253 (447)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~ 253 (447)
++++++.+. +++++||+||+++++|.++|+.+||++|+++|++||+++|+||||+|+||+
T Consensus 169 ----------------~~~l~~~l~----~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~ 228 (397)
T TIGR03246 169 ----------------LAAAKALIS----DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRT 228 (397)
T ss_pred ----------------HHHHHHHhc----cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCcc
Confidence 377777774 469999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcH
Q 013204 254 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 333 (447)
Q Consensus 254 g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~ 333 (447)
|..++++++++.||++++||+++|| +|+|++++++++++.+. ...+++||+++|+++++++++|+.++++++
T Consensus 229 G~~~a~~~~gv~pDi~t~~K~lggG-~pigav~~~~~i~~~~~-------~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l 300 (397)
T TIGR03246 229 GELYAYMHYGVTPDILTSAKALGGG-FPIGAMLTTTEIAAHLK-------VGTHGTTYGGNPLACAVAGKVLDLVNTPEL 300 (397)
T ss_pred ccchhhhhcCCCCCEEEeehhhhCC-cceeEEEEcHHHHHhcc-------CCCcCCCCCCCHHHHHHHHHHHHHHhhccH
Confidence 9988888999999999999999987 89999999999998885 224667899999999999999999888889
Q ss_pred HHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEEE
Q 013204 334 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM 411 (447)
Q Consensus 334 ~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR~ 411 (447)
.++++++++++++.|+++ .+++++.++++.|.++++++..... .....+.+.|+++|+++.+.+ +.+|+
T Consensus 301 ~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~---------~~~~~~~~~l~~~Gv~~~~~g~~~lR~ 371 (397)
T TIGR03246 301 LAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQ---------GKAKQFVNAAAEEGVIALIAGPNVVRF 371 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCchh---------hHHHHHHHHHHHCCeEEeecCCCEEEE
Confidence 999999999999999998 5577888999999999998864210 125568899999999998776 68999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 412 SPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 412 ~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
+||+.+|+++|++++++|++++.++
T Consensus 372 ~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 372 APSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred eCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998753
No 49
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=7.2e-63 Score=485.47 Aligned_cols=390 Identities=25% Similarity=0.445 Sum_probs=326.0
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT- 91 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~- 91 (447)
..+|+++++++|+++||.|||+||||.+++|+.+|||+||+|.+|+.+++++....+.. ...++...++++++++.+.
T Consensus 19 ~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~-~~~~~~~~~lae~l~~~~~~ 97 (425)
T PRK09264 19 RSFPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGL-DMHTTAKREFLETFEETILK 97 (425)
T ss_pred CCCCccEEeeecCEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhccccccc-ccCcHHHHHHHHHHHHhhcC
Confidence 34789999999999999999999999999999999999999999999999874443332 3357888999999998752
Q ss_pred cCCCC-eEEEe-CChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCC
Q 013204 92 ASKMA-KVFFT-NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC 169 (447)
Q Consensus 92 ~~~~~-~v~~~-~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (447)
+.+.+ +++|+ +||+|||+.|||++|.+ +++.+||.|+++|||++.++++.++.+.++..++++...+.++|+
T Consensus 98 ~~~~~~~~~f~~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~ 171 (425)
T PRK09264 98 PRGLDYKVQFTGPTGTNAVEAALKLARKV------TGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPY 171 (425)
T ss_pred CcCCCceEEEeCCCHHHHHHHHHHHHHHh------cCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCC
Confidence 22333 67675 89999999999999988 567899999999999999999998877666666666556667777
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHHHHHhhC--CCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhh
Q 013204 170 PHYWRYAHPGETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI 247 (447)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~ 247 (447)
|+.++ . ..++++++++++.+.. ++++++||+||+++++|+++++++||++|+++|++||+++|+||||
T Consensus 172 ~~~~~-----~-----~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~ 241 (425)
T PRK09264 172 DGYFG-----G-----DVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQ 241 (425)
T ss_pred CCccc-----c-----chhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechh
Confidence 65321 0 1234577888886532 3579999999999999999999999999999999999999999999
Q ss_pred cCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHH-H
Q 013204 248 CAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEAL-K 326 (447)
Q Consensus 248 ~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l-~ 326 (447)
+||||+|..++++++++.||++++||+++++++|+|++++++++. .+. ...+.+||++||++++++++++ +
T Consensus 242 tG~GrtG~~~~~~~~~v~PDi~t~~K~l~~~G~pigav~~~~~i~-~~~-------~~~~~~T~~gnp~~~aaa~a~l~~ 313 (425)
T PRK09264 242 AGCGRTGTFFSFERAGITPDIVTLSKSISGYGLPMALVLIKPELD-VWK-------PGEHNGTFRGNNLAFVTATAALEE 313 (425)
T ss_pred hCCccccHHHHHhhcCCCCCEEEeccccCCCccceEEEEEchhhh-ccC-------CCccCCCCCCCHHHHHHHHHHHHH
Confidence 999999998899999999999999999998338999999998873 332 2246679999999999999999 6
Q ss_pred HHhhhcHHHHHHHHHHHHHHhHhhc-cCCCc-eeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEe
Q 013204 327 IYKERNIVEQVNKIAPKFQDGVKAF-SDSPI-IGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV 404 (447)
Q Consensus 327 ~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~-~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~ 404 (447)
+++++++.++++++++++++.|+++ .+++. +.++++.|+++++.+.+.. ....+.+.++++|+++.+
T Consensus 314 ~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~-----------~~~~l~~~~~~~Gv~~~~ 382 (425)
T PRK09264 314 YWSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGE-----------LAGKIAAEAFENGLIIET 382 (425)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecChH-----------HHHHHHHHHHHCCCEEec
Confidence 6666789999999999999999887 45663 4788999999999986432 345688999999999987
Q ss_pred eC---CEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 405 SG---DNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 405 ~g---~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
.+ .+|||+||+++|+++|++++++|+++++++.+
T Consensus 383 ~~~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~ 419 (425)
T PRK09264 383 SGPEDEVVKLLPPLTIDEEELEEGLDILEEAVAEVLA 419 (425)
T ss_pred cCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 64 68999999999999999999999999988644
No 50
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=6.4e-63 Score=482.98 Aligned_cols=389 Identities=24% Similarity=0.397 Sum_probs=312.7
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHH--HhcCCcccccCcCCChHHHHHHHHHHH---
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ--LNTLPFYHSFWNRTTKPSLDLAKELLE--- 88 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~--- 88 (447)
++|+++++++|+||||.|||+||||.+++|+.+|||+||+|++|+.++ ...+...+ ...+++..++++++.+
T Consensus 39 ~~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~---~~~~~~~~~la~~l~~~l~ 115 (464)
T TIGR00699 39 HFLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRP---ALGNFPSKDWAKILKEGIL 115 (464)
T ss_pred ccceEEEecccCEEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccc---cCCcHHHHHHHHHHHHhHH
Confidence 679999999999999999999999999999999999999999999985 33332221 2356677888888854
Q ss_pred -hcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCC-------------------CC--cceEEEEcCCCccchhhhhc
Q 013204 89 -MFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR-------------------PN--KKKFIARQKSYHGSTLIAAS 146 (447)
Q Consensus 89 -~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~-------------------~~--~~~vi~~~~~yhg~~~~~~~ 146 (447)
.. +.+.++|+|++||+|||+.|||+++.++..+++ ++ +.+||.|.++|||++.++++
T Consensus 116 ~~~-p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als 194 (464)
T TIGR00699 116 KVA-PKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLS 194 (464)
T ss_pred hhC-CCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHH
Confidence 43 345689999999999999999999988653221 12 34899999999999999999
Q ss_pred ccCCccccCCCCCCCCcceecCCCCcccCCCCC--CChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCCh
Q 013204 147 LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPG--ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPA 224 (447)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~ 224 (447)
.++.+.+... ..+.....++++|+ ++++... ...+....++++++++++.. .++++++||+||+++++|.++|++
T Consensus 195 ~t~~~~~~~~-~~~~~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~l~~l~~~l~~-~~~~iAAvI~EPv~g~~G~~~~~~ 271 (464)
T TIGR00699 195 TTRSKPIHKL-DIPAFDWPQAPFPS-LKYPLEEHVKENAKEEQRCLEEVEDLIKK-WHKPVAAIIVEPIQSEGGDNHASP 271 (464)
T ss_pred hcCCcccccc-CCCCCCceecCCCC-cccccccccccchhHHHHHHHHHHHHHHh-cCCcEEEEEEeCCCCCCCCcCCCH
Confidence 8886543332 23333445666664 2221110 11234455677888888864 345799999999999999999999
Q ss_pred hHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCC--CCeeeecccCC-CcccceeEEEeChhHHHHhhhccCC
Q 013204 225 TYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK--PDLVSFAKALS-SAYMPIGAILVSPEVSEVIHSQSNT 301 (447)
Q Consensus 225 ~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~--~d~v~~sK~l~-gg~~~~g~~~~~~~~~~~~~~~~~~ 301 (447)
+||++|+++|++||++||+|||++||||+|..|+++++|+. ||++|+||+++ ||+ ++.+ +. +..
T Consensus 272 ~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG~-----~~~~-~~---~~~---- 338 (464)
T TIGR00699 272 DFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAGY-----FFHD-PA---FRP---- 338 (464)
T ss_pred HHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCCc-----cccc-hh---ccC----
Confidence 99999999999999999999999999999999999999997 99999999996 453 2222 21 211
Q ss_pred CCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhc-cCCC-ceeeEe--eeeeEEEEEeecCCCC
Q 013204 302 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIR--GTGLILGTEFADNKSP 377 (447)
Q Consensus 302 ~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~~~--~~g~~~~i~~~~~~~~ 377 (447)
...+.+++||++||++|++++++|++++++++.+++++++++|++.|+++ .+++ .+.+++ |.|+++++++.+..
T Consensus 339 ~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~-- 416 (464)
T TIGR00699 339 NKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEA-- 416 (464)
T ss_pred CCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHH--
Confidence 11345788999999999999999999999999999999999999999998 5678 788999 99999999885321
Q ss_pred CCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 378 NEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 378 ~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
....+.+.++++|+++...| +.|||.||+++|++||++++++|++++
T Consensus 417 ---------~~~~i~~~~~~~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 417 ---------KRDKLLKKARNNGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred ---------HHHHHHHHHHHCCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 24568899999999998876 689999999999999999999998864
No 51
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=3e-62 Score=484.66 Aligned_cols=409 Identities=27% Similarity=0.483 Sum_probs=335.9
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
..|+++++++|+++||.|||+||||.+++|+.+|||+||+|.+|+.++++++..... ....+++..+++++|++.++..
T Consensus 35 ~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~~la~~L~~~~p~~ 113 (451)
T PRK06918 35 GIPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGF-NVMMYEPYIELAEKLAALAPGS 113 (451)
T ss_pred CCCceEEeccccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccc-cccccHHHHHHHHHHHHhCCCC
Confidence 357899999999999999999999999999999999999999999999987643321 1235788999999999997422
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCC-ccccCCCCCCCCcceecCCCCc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
..++++|++||+||++.|||++|.+ +++.+||.|+++|||++.++++.++. ..++..+....+.+.++++|+.
T Consensus 114 ~~~~v~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (451)
T PRK06918 114 FDKKVLFLNSGAEAVENAVKIARKY------TKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYE 187 (451)
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHHH------hCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCcc
Confidence 2269999999999999999999988 46788999999999999999988774 3344445544455566777655
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHh-hCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCC
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILK-EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 251 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~-~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g 251 (447)
++.+. +...+.+...+++.+++.+.. ..++++++||+||+++++|.++|+++|+++|+++|++||+++|+|||++|||
T Consensus 188 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~g 266 (451)
T PRK06918 188 YRRPE-GLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFA 266 (451)
T ss_pred ccccc-cCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcC
Confidence 43221 112233444445566665532 2457899999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh
Q 013204 252 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 331 (447)
Q Consensus 252 ~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~ 331 (447)
|+|..++++.+++.||++++||++++| +|+|++++++++++.+. ...+.+|++++|++++++.++|+.++++
T Consensus 267 r~g~~~a~~~~~v~pDi~t~sK~l~~G-~pig~v~~~~~i~~~~~-------~~~~~~T~~g~~l~~aaa~a~l~~i~~~ 338 (451)
T PRK06918 267 RTGKYFAIEHFDVVPDLITVSKSLGAG-VPISGVIGRKEIMDESA-------PGELGGTYAGSPLGCAAALAVLDIIEKE 338 (451)
T ss_pred ccCceehhHhcCCCCCEEeeehhhcCC-CccEEEEEcHHHHhccC-------CCCcCcCCCcCHHHHHHHHHHHHHHHHC
Confidence 999888888899999999999999988 89999999999998874 2246789999999999999999999888
Q ss_pred cHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC---C
Q 013204 332 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---D 407 (447)
Q Consensus 332 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g---~ 407 (447)
++.++++++++++++.|+++ .+++.+.++++.|+++++.+..+..... + .......+.+.|+++||++.+.+ +
T Consensus 339 ~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~--~-~~~~~~~l~~~~~~~Gvlv~~~~~~~~ 415 (451)
T PRK06918 339 NLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKE--P-DKTLTANICKEANKRGLLLLSAGTYGN 415 (451)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCC--C-cHHHHHHHHHHHHHCCeEEeecCCCCC
Confidence 99999999999999999988 5677888899999999988853221111 1 11235667888899999998864 7
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 013204 408 NIMMSPPFIMSPEEVDELISKYGKALKATEERVK 441 (447)
Q Consensus 408 ~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~ 441 (447)
.+||+||+.+++++|++++++|+++++++.++-+
T Consensus 416 ~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~~~~ 449 (451)
T PRK06918 416 VIRVLMPLVITDEQLEEGLTIIEESLQACYEKAN 449 (451)
T ss_pred EEEEECCCccCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8999999999999999999999999988765543
No 52
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=1.1e-62 Score=481.78 Aligned_cols=385 Identities=25% Similarity=0.443 Sum_probs=323.7
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-c
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-A 92 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~ 92 (447)
.+|+++++++|+++||.|||+||||.+++++.+|||+||+|.+|+.+++++....+.. ...++...++++++++... +
T Consensus 16 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~-~~~~~~~~~lae~l~~~~~~~ 94 (412)
T TIGR02407 16 SFPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSL-DMATEAKREFLETFNEIILKP 94 (412)
T ss_pred CCCceEEecccCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceecc-ccCcHHHHHHHHHHHHhccCc
Confidence 4789999999999999999999999999999999999999999999999864443322 2357888999999998752 2
Q ss_pred CCC-CeEEEe-CChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCC
Q 013204 93 SKM-AKVFFT-NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP 170 (447)
Q Consensus 93 ~~~-~~v~~~-~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (447)
.+. ++++|+ +||+|||+.|||+++.+ +++++||.|+++|||++.++++.++.+.++..++.+...+..+|++
T Consensus 95 ~~~~~~~~f~~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~ 168 (412)
T TIGR02407 95 RGLDYKVQFPGPTGTNAVESALKLARKV------TGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYD 168 (412)
T ss_pred cCCCceEEEeCCCchHHHHHHHHHHhhh------cCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCC
Confidence 222 256664 89999999999999987 5678999999999999999999988776677676665555666665
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHHHHhhC--CCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc
Q 013204 171 HYWRYAHPGETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 248 (447)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~ 248 (447)
+... . ..++++.+++.+.+.. .+++++||+||+++++|.++|+++||++|+++|++||+++|+|||++
T Consensus 169 ~~~~---~-------~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t 238 (412)
T TIGR02407 169 GYLG---G-------DVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQA 238 (412)
T ss_pred Cccc---c-------chhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 4321 0 1234567888776432 25789999999999999999999999999999999999999999999
Q ss_pred CCCccccccccccCCCCCCeeeecccCCC-cccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHH
Q 013204 249 AFGRLGTMFGCDKYSIKPDLVSFAKALSS-AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI 327 (447)
Q Consensus 249 g~g~~g~~~~~~~~~~~~d~v~~sK~l~g-g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~ 327 (447)
||||+|+.|+++++++.||++++||++++ | +|+|++++++++ +.+. ...+++||++||++|+++.++++.
T Consensus 239 G~GRtG~~~a~~~~~v~PDi~~~~K~lg~~G-~pigav~~~~~~-~~~~-------~~~~~~T~~gnpl~~aaa~a~l~~ 309 (412)
T TIGR02407 239 GCGRTGTFFSFEPAGIEPDIVCLSKSISGYG-LPLALTLIKPEL-DVWK-------PGEHNGTFRGNNLAFVTATAALEY 309 (412)
T ss_pred CCCccchhHHhcccCCCCCEEEechhccCCc-cceeEEEEchhh-hccC-------CCccCCCCCccHHHHHHHHHHHHH
Confidence 99999999999999999999999999998 6 899999999886 5442 235778999999999999999995
Q ss_pred -HhhhcHHHHHHHHHHHHHHhHhhc-cCCC-ceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEe
Q 013204 328 -YKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV 404 (447)
Q Consensus 328 -~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~ 404 (447)
++++++.++++++++++++.|+.+ ..++ .+.++++.|+++++.+.+.. ....+.+.|+++||++.+
T Consensus 310 ~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~~~-----------~~~~~~~~~~~~Gv~v~~ 378 (412)
T TIGR02407 310 YWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGD-----------LAGKIAKAAFENGLIIET 378 (412)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecChH-----------HHHHHHHHHHHCCCEEec
Confidence 777789999999999999999987 5565 56889999999999996532 245688899999999976
Q ss_pred eC---CEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 405 SG---DNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 405 ~g---~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
.+ +.||++||+.+|++++++++++|++++++
T Consensus 379 ~~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 379 SGPNDEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred cCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 54 67999999999999999999999999863
No 53
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=1.7e-62 Score=482.83 Aligned_cols=404 Identities=24% Similarity=0.363 Sum_probs=320.0
Q ss_pred CCCCCeE--EEEecCcEEEeC-CCCEEEecCCccccccCCCCCHHHHH--HHHHHHhcCCccc-ccCcCCChHHHHHHHH
Q 013204 12 TDVHPLV--IEKSEGSYVYDV-NGKKYLDSLAGLWCTALGGSEPRLVA--AATAQLNTLPFYH-SFWNRTTKPSLDLAKE 85 (447)
Q Consensus 12 ~~~~~~~--~~~~~g~~~~d~-dg~~~lD~~~~~~~~~lG~~~p~v~~--a~~~~~~~~~~~~-~~~~~~~~~~~~l~~~ 85 (447)
+.++|++ +.+++|+++||. |||+||||.+++|+++|||+||+|.+ ++.+++.+..+.+ ......++...+++++
T Consensus 21 ~~~~p~~~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~ 100 (443)
T PRK08297 21 VDGFDLVLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDT 100 (443)
T ss_pred hcCCCcceEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHH
Confidence 3456655 799999999995 99999999999999999999999999 9999998754211 1223568889999999
Q ss_pred HHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHH----hcCC--CCcceEEEEcCCCccchhhhhcccCCccccCCCCC
Q 013204 86 LLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN----ALGR--PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDL 159 (447)
Q Consensus 86 l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~----~~~~--~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 159 (447)
+.+...+.+.++|+|++||+|||+.|||++++|+. .+|+ +++.+||.|.++|||++.++++.++.+........
T Consensus 101 l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~ 180 (443)
T PRK08297 101 FARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFP 180 (443)
T ss_pred HHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCC
Confidence 99886334568999999999999999999998853 2454 35689999999999999999998875432222111
Q ss_pred CCCcceecCCCCcccCCCCCC---ChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHh
Q 013204 160 PAPFVLHTDCPHYWRYAHPGE---TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK 236 (447)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~ 236 (447)
. ....+++.|.. .++.+.. +.+.+..++++++++++.. .++++++||+||+++++|+++|+++||++|+++|++
T Consensus 181 ~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~ 257 (443)
T PRK08297 181 K-FDWPRIDNPKL-RFPLPGEDLEEVEALEAEALAQARAAFER-HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDE 257 (443)
T ss_pred C-CCccccCCCCC-CCCCcccccchhhHHHHHHHHHHHHHHHh-CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHH
Confidence 1 11112222221 1111111 1344555677888888865 457899999999999999999999999999999999
Q ss_pred cCCEEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHH
Q 013204 237 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPV 316 (447)
Q Consensus 237 ~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 316 (447)
||+++|+|||+|||||+|..|+++++++.||++++||+++ +|+++.++++.+.+...-. ....+++||++||+
T Consensus 258 ~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~-----~~a~l~~~~i~~~~~~~~~--~~~~~~~T~~gnpl 330 (443)
T PRK08297 258 HDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKTQ-----VCGIMAGRRVDEVEDNVFA--VSSRINSTWGGNLV 330 (443)
T ss_pred cCCEEEEechhhccCccchHHHHHhcCCCCCEEEeccccc-----ccceecchHHHHhhhhhcc--CccccCCCCCccHH
Confidence 9999999999999999999999999999999999999974 3445555555433211000 01247789999999
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhc-cCCCcee-eEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHH
Q 013204 317 SCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIG-EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ 394 (447)
Q Consensus 317 ~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (447)
+|++++++|++++++++.++++++++++++.|+++ .+++.+. +++|.|+++++++.+.. ....+.+.
T Consensus 331 ~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~~~-----------~~~~~~~~ 399 (443)
T PRK08297 331 DMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPTTA-----------DRDEVIRR 399 (443)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecCHH-----------HHHHHHHH
Confidence 99999999999998999999999999999999998 5677554 89999999999986421 24568889
Q ss_pred HHHcCceEEeeC-CEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 395 CEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 395 l~~~Gi~~~~~g-~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
|+++|+++.+.+ +.+||+||+.+|+++|++++++|+++++++
T Consensus 400 l~~~Gvl~~~~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 400 LWEEGVLVLPCGERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred HHHCCEEEecCCCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 999999998876 679999999999999999999999998765
No 54
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=2.1e-62 Score=481.08 Aligned_cols=394 Identities=26% Similarity=0.425 Sum_probs=328.7
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
.+|+++++++|++|||.|||+||||.+++|+.+|||+||+|.+|+.++++++...+ .....+++..++++++++..+..
T Consensus 21 ~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~-~~~~~~~~~~~la~~l~~~~p~~ 99 (421)
T PRK09792 21 MCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTA-YQIVPYESYVTLAEKINALAPVS 99 (421)
T ss_pred CCCeeEEeccccEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcc-cCccCCHHHHHHHHHHHHhCCCC
Confidence 34789999999999999999999999999999999999999999999998754322 12346888999999999986433
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCC-ccccCCCCCCCCcceecCCCCc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
+.++++|++||+||++.|||+++.+ +++.+||.|.++|||++.++++.++. +.++.++......+..+++|..
T Consensus 100 ~~~~~~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~ 173 (421)
T PRK09792 100 GQAKTAFFTTGAEAVENAVKIARAH------TGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSD 173 (421)
T ss_pred CCceEEEeCChHHHHHHHHHHHHHh------cCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcc
Confidence 4569999999999999999999977 56788999999999999999988775 2345454443334455666543
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHhh-CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCC
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 251 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~~-~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g 251 (447)
.+ . ....++++.+++.+.+. .++++++|++||+++++|.++++++|+++|+++|++||+++|+|||++|||
T Consensus 174 ~~----~----~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~g 245 (421)
T PRK09792 174 LH----G----ISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFA 245 (421)
T ss_pred cc----c----ccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 21 0 11234567788877642 346799999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh
Q 013204 252 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 331 (447)
Q Consensus 252 ~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~ 331 (447)
|+|..++++++++.||+++|||++++| +|+|++++++++++.+.. ..+.+|+++||++|+++++++++++++
T Consensus 246 r~G~~~a~~~~~~~pDi~t~gK~l~~G-~pigav~~~~~i~~~~~~-------~~~~~T~~gnpl~~aaa~a~l~~l~~~ 317 (421)
T PRK09792 246 RTGKLFAMDHYADKPDLMTMAKSLAGG-MPLSGVVGNANIMDAPAP-------GGLGGTYAGNPLAVAAAHAVLNIIDKE 317 (421)
T ss_pred CCCchhHHHhcCCCCcEEEeehhhcCC-CceEEEEEcHHHHhccCC-------CCcCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 999988999999999999999999998 799999999999988752 246789999999999999999999888
Q ss_pred cHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee---CC
Q 013204 332 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GD 407 (447)
Q Consensus 332 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---g~ 407 (447)
++.++++++++++++.|+++ .+++.+..++|.|+++++++.+... ..+ .......+.+.|+++|+++.+. ++
T Consensus 318 ~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~-~~~---~~~~~~~l~~~~~~~Gv~i~~~g~~~~ 393 (421)
T PRK09792 318 SLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQT-GEP---SAAIAQKIQQRALAQGLLLLTCGAYGN 393 (421)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCcc-CCc---chHHHHHHHHHHHHCCcEEeecCCCCC
Confidence 89999999999999999998 5678888999999999999975321 110 1123566888999999999754 36
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 408 NIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 408 ~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
.|||.||+++++++|++++++|++++.
T Consensus 394 ~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 394 VIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred EEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999874
No 55
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-62 Score=447.33 Aligned_cols=401 Identities=29% Similarity=0.424 Sum_probs=324.0
Q ss_pred CCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHH
Q 013204 2 LAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLD 81 (447)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~ 81 (447)
|++.+.+...-..+|+++.+++|+.++|.||++|+||.++||+..+||+||++.+++.+++.++.+. .....+.+..+
T Consensus 25 ~~~~~~~~~t~a~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs--~~~~~t~eav~ 102 (433)
T KOG1401|consen 25 VEEKTRIVSTYARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHS--SNGYFTLEAVE 102 (433)
T ss_pred cccceEEeeecCCCceeeecceeeeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheec--cCccccHHHHH
Confidence 4444555555677899999999999999999999999999999999999999999999999886443 33345556889
Q ss_pred HHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCC
Q 013204 82 LAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPA 161 (447)
Q Consensus 82 l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 161 (447)
+++.+.+-......++|+|++||||||+.|||++|+.+..+...++.++|.|+++|||.++++++.++...|+.++++..
T Consensus 103 l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~ 182 (433)
T KOG1401|consen 103 LEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIA 182 (433)
T ss_pred HHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCC
Confidence 99999888755688999999999999999999999886554434446799999999999999999998888877776655
Q ss_pred CcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEE
Q 013204 162 PFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILF 241 (447)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~l 241 (447)
+.+....+- +...+++++..++ +.+++||+||+++.||.++++++||..|+++|+++|++|
T Consensus 183 p~v~~~~yn------------------d~t~l~k~~~~h~-~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~ 243 (433)
T KOG1401|consen 183 PDVVTAEYN------------------DSTALEKLFESHK-GEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLL 243 (433)
T ss_pred CceeecccC------------------CHHHHHHHHHhCC-CceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceE
Confidence 444332221 2488888887654 579999999999999999999999999999999999999
Q ss_pred EEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHH
Q 013204 242 IADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVA 321 (447)
Q Consensus 242 i~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa 321 (447)
|+|||+|||||+|..|++++++++|||.|++|.|+|| +|+|++++++++++.+.... .+.|++||++||++|.++
T Consensus 244 I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~gG-lPigA~~v~~kV~~~i~~~~----~l~hg~Tf~gnpLacsa~ 318 (433)
T KOG1401|consen 244 IFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLGGG-LPIGATGVRDKVAEMISPGD----HLYHGGTFSGNPLACSAG 318 (433)
T ss_pred EeehhhhCccccchHHHHHHhCcCCcceeehhhccCC-ceeEEEeehHHHHhhcCCCC----ccccCcccCCChhhhhHH
Confidence 9999999999999999999999999999999999999 89999999999999997542 478899999999999999
Q ss_pred HHHHHHHhhhcHHHHHHHHHHHHHHhHhhc-cCCCceeeE-eeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcC
Q 013204 322 IEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 399 (447)
Q Consensus 322 ~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 399 (447)
..+++.+.+++.+.++.+.++.|++.+.+. .+.+..... .++|.++++.+..+..... + .......+...+
T Consensus 319 ~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~~~~---d----~~~~~~ll~~~~ 391 (433)
T KOG1401|consen 319 IKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVYKFA---D----AAREQGLLILTL 391 (433)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeechhhhh---h----hhhhhhHHHHHH
Confidence 999999999999999999999999999776 555543333 7888888887766432111 0 001111122222
Q ss_pred ceEEeeCCEEEEec--CCC--CCHHHHHHHHHHHHHHHHHH
Q 013204 400 MLVRVSGDNIMMSP--PFI--MSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 400 i~~~~~g~~iR~~~--~~~--~t~e~i~~~~~~l~~~l~~~ 436 (447)
....+. ..+|+.| .+. +++|.++++++++.+.+.++
T Consensus 392 ~~~~~~-~gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l~~~ 431 (433)
T KOG1401|consen 392 GKGLLE-EGVRIAPIYLLTVEHTPEVIQRLLTILEKVLSAL 431 (433)
T ss_pred hccccc-ceEEEeccccccccCcHHHHHHHHHHHHHHHHHh
Confidence 111111 4577777 333 45899999999999988775
No 56
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-62 Score=522.50 Aligned_cols=399 Identities=27% Similarity=0.469 Sum_probs=330.9
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
.+|+++++++|++|||.|||+||||.+++ .++||+||+|.+|+.++++++...+ ...++...++++++++.++ .
T Consensus 605 ~~p~~i~~g~G~~l~D~dG~~ylD~~~g~--~~lGH~hp~v~~Ai~~q~~~l~~~~---~~~~~~~~~lAe~L~~~~p-~ 678 (1013)
T PRK06148 605 SDPIKFVRGWGVWLIDNRGRAYLDCFNNV--CHVGHAHPRVVAAAARQAARLNTNT---RYLHDAIVAYAERLTATLP-D 678 (1013)
T ss_pred CCCceEEEeeecEEEECCCCEEEEcccCh--hhcCCCCHHHHHHHHHHHhhcCCcC---CcCCHHHHHHHHHHHHhCC-C
Confidence 56899999999999999999999999884 7899999999999999998753322 3468899999999999874 3
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC-CCcceecCCCCc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP-APFVLHTDCPHY 172 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 172 (447)
+.++++|++||||||+.|||++|.+ +++++||.|+++|||++.+++++++.. ++..+... ...+..++.|+.
T Consensus 679 ~~~~v~f~nSGsEA~e~AlklAr~~------tGr~~ii~~~~~YHG~t~~a~s~s~~~-~~~~~~~~~~~~~~~~~~p~~ 751 (1013)
T PRK06148 679 GLTVAFFVNSGSEANSLALRLARAH------TGQRDAIVLDHAYHGTTTELIDLSPYK-FNRKGGKGRPDHVEVAEVPDS 751 (1013)
T ss_pred CcCEEEEeCCcHHHHHHHHHHHHHh------cCCCeEEEEcCCccCCCcchhhcCchh-hcccCCCCCCCCceEcCCCCc
Confidence 5679999999999999999999988 567899999999999999999887733 23332211 123344555544
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHh--hCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCC
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~--~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~ 250 (447)
++.++.. ..+......++++++.+.. ..++.+++||+||+++++|+++|+++||++++++|++||+++|+|||||||
T Consensus 752 ~~~~~~~-~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGf 830 (1013)
T PRK06148 752 YRGPERW-PDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGF 830 (1013)
T ss_pred cccCCCC-ChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCC
Confidence 4433221 1122334445667766643 234679999999999999999999999999999999999999999999999
Q ss_pred Ccccc-ccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh
Q 013204 251 GRLGT-MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK 329 (447)
Q Consensus 251 g~~g~-~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~ 329 (447)
||+|. .|+++++|+.||++|+||+|+|| +|+|++++++++++.+.. ...+++||++||++|++++++|++++
T Consensus 831 GRtG~~~~a~e~~gv~PDivt~gK~lggG-~Plgav~~~~ei~~~~~~------g~~~~~Tf~gnpla~aaa~a~L~~i~ 903 (1013)
T PRK06148 831 GRVGSHWWAFETQGVVPDIVTMGKPIGNG-HPMGAVVTTREIADSFDN------GMEYFNTFGGNPVSCAIGLAVLDIIE 903 (1013)
T ss_pred CCCCCcchhhhhcCCCcceeeecccccCC-cceEEEEEcHHHHhhccC------CCccccCCCCCHHHHHHHHHHHHHHh
Confidence 99997 78999999999999999999999 799999999999998852 12356899999999999999999999
Q ss_pred hhcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC--
Q 013204 330 ERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-- 406 (447)
Q Consensus 330 ~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-- 406 (447)
++++.+++++++++|++.|+++ .+++++.+++|.|+++++++..+..+..+ ....+..+.+.|+++||++.+.|
T Consensus 904 ~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~---~~~~~~~i~~~~~~~Gvl~~~~g~~ 980 (1013)
T PRK06148 904 DEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAP---ATAIARYVKNGARERGILIGTEGPH 980 (1013)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCc---cHHHHHHHHHHHHhCCeEEeccCCC
Confidence 9999999999999999999998 67899999999999999999754322211 11235668899999999998754
Q ss_pred -CEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 407 -DNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 407 -~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
+.+||.||+++|+++||+++++|++++.++
T Consensus 981 ~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 981 DNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999764
No 57
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.9e-62 Score=475.80 Aligned_cols=374 Identities=28% Similarity=0.464 Sum_probs=311.6
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
...|+++++++|+++||.|||+||||.+++++++|||+||+|.+|+.+++++....+. ...+++..++++++.+..
T Consensus 16 ~~~~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~--~~~~~~~~~la~~l~~~~-- 91 (395)
T PRK03715 16 NRPDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSP--AFYNEPMAKLAGLLTQHS-- 91 (395)
T ss_pred CCCCceEEeeecCEEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccc--cccCHHHHHHHHHHhhcc--
Confidence 3467899999999999999999999999999999999999999999999987543322 235778889999998763
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCc
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
+.++++|++||+|||+.|+|+++.++.. +.+++++||.++++|||++.++++.++.+.++..+......+.+.++
T Consensus 92 -~~~~v~f~~SGseA~e~Aik~ar~~~~~-~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--- 166 (395)
T PRK03715 92 -CFDKVFFANSGAEANEGAIKLARKWGRK-HKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAEL--- 166 (395)
T ss_pred -CCCEEEEeCCcHHHHHHHHHHHHHHhhc-cCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCC---
Confidence 4579999999999999999999987542 33567899999999999999999988866554433322222222211
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCc
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 252 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~ 252 (447)
++++++++.+. +++++||+||+++++|.++|+++|+++|+++|++||+++|+||||+||||
T Consensus 167 ---------------~d~~~l~~~l~----~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GR 227 (395)
T PRK03715 167 ---------------NDIASVEKLIT----DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGR 227 (395)
T ss_pred ---------------chHHHHHHHcC----CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCC
Confidence 12466776664 46899999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhc
Q 013204 253 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 332 (447)
Q Consensus 253 ~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~ 332 (447)
+|+.|+++++++.||++|+||+++|| +|+|+++++++++. +. ...+++||+++|++|++++++|+++++++
T Consensus 228 tG~~~a~~~~gv~PDi~t~gK~lg~G-~p~~av~~~~~i~~-~~-------~~~~~~T~~g~pl~~aaala~L~~l~~~~ 298 (395)
T PRK03715 228 TGTLFAYELSGIEPDIMTLGKGIGGG-VPLAALLAKAEVAV-FE-------AGDQGGTYNGNPLMTAVGVAVISQLLAPG 298 (395)
T ss_pred CcchhhHhhcCCCCceeeehhhhhCC-cceEEEEEcccccc-cc-------CCCcCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999 79999999999863 22 12467899999999999999999999889
Q ss_pred HHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHc---CceEEee-CC
Q 013204 333 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH---GMLVRVS-GD 407 (447)
Q Consensus 333 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---Gi~~~~~-g~ 407 (447)
+.+++++++++|++.|+++ .+++ +..++|.|+++++++.++. ...+.+.+.+. |+++... ++
T Consensus 299 l~~~~~~~g~~l~~~L~~l~~~~~-i~~vrG~Glm~~i~l~~~~------------~~~~~~~~~~~~~~Gi~~~~~~~~ 365 (395)
T PRK03715 299 FLEGVRARGEYLKEKLLELSEERG-LEGERGEGLLRALLLGKDI------------GPQIVEKARDMQPDGLLLNAPRPN 365 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCC-cCeEEcceeEEEEEecCch------------HHHHHHHHHhccCCCEEEeecCCC
Confidence 9999999999999999988 4455 5678999999999986531 22344555555 9998754 47
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 408 NIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 408 ~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
.+||+||+++|+++|++++++|+++++++
T Consensus 366 ~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 366 LLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred EEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 89999999999999999999999999764
No 58
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=4.8e-62 Score=466.08 Aligned_cols=356 Identities=26% Similarity=0.483 Sum_probs=306.8
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
..|+++.+++|+|+||.|||+||||.++++++++||+||+|.+|+.+++++...... ...+++..+++++++++.
T Consensus 5 ~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~--~~~~~~~~~la~~l~~~~--- 79 (364)
T PRK04013 5 RKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGP--MFEHEEKEEMLEELSKWV--- 79 (364)
T ss_pred CCCccEEEeecCEEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccC--CcCCHHHHHHHHHHHhhc---
Confidence 357889999999999999999999999999999999999999999999998654332 346889999999999885
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 173 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
+.++++|++||+||++.|+|+++.+ +++++||.++++|||++.++++.++.+.++..+......+..+++++
T Consensus 80 ~~~~v~~~~SGseA~e~Alklar~~------~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d-- 151 (364)
T PRK04013 80 NYEYVYMGNSGTEAVEAALKFARLY------TGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFND-- 151 (364)
T ss_pred CCCEEEEeCchHHHHHHHHHHHHHH------hCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCC--
Confidence 4569999999999999999999987 45789999999999999999998887766666554444444444432
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcc
Q 013204 174 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 253 (447)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~ 253 (447)
.+.+++.+. +++++||+||+++++|.++++++|+++|+++|++||+++|+|||++|+ |+
T Consensus 152 ----------------~~~l~~~i~----~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-Rt 210 (364)
T PRK04013 152 ----------------VEAAKEAIT----KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RT 210 (364)
T ss_pred ----------------HHHHHHHhc----CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CC
Confidence 255666664 579999999999999999999999999999999999999999999999 99
Q ss_pred ccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcH
Q 013204 254 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 333 (447)
Q Consensus 254 g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~ 333 (447)
|..|+++++++.||++++||+++|| +|+|+++.++++. ...+++||++||++|++++++|++++++++
T Consensus 211 G~~~a~~~~gv~PDiv~~gK~lggG-~P~~a~~~~~~~~-----------~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l 278 (364)
T PRK04013 211 GKFLAIEHYKVEPDIVTMGKGIGNG-VPVSLTLTNFDVE-----------RGKHGSTFGGNPLACKAVAVTLRILRRERL 278 (364)
T ss_pred CchhHHHhcCCCCCEEEecccccCC-ceeEEEEeccccc-----------CCCcCCCCCcCHHHHHHHHHHHHHHHhccH
Confidence 9999999999999999999999999 7999999987751 124778999999999999999999999998
Q ss_pred HHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEEEe
Q 013204 334 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS 412 (447)
Q Consensus 334 ~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR~~ 412 (447)
.+++++. |+++. .+.+.+++|.|+|+++++..+ ...+.+.++++|+++.+.+ +.+||.
T Consensus 279 ~~~~~~~-------l~~l~-~~~v~~vRG~Gl~~gve~~~~-------------~~~i~~~~~~~Gll~~~~g~~vlr~~ 337 (364)
T PRK04013 279 VEKAGEK-------FIEIK-GERVVTTRGRGLMIGIVLKKP-------------VGKYVEELQNRGYLVHTAGQRVIRLL 337 (364)
T ss_pred HHHHHHH-------HHHhc-cCcceeeeeCcEEEEEEeCCc-------------HHHHHHHHHhCCcEEeeCCCCEEEEe
Confidence 8887764 23342 267889999999999999632 2357888999999998876 789999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 413 PPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 413 ~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
||+++|++++++++++|+++++++
T Consensus 338 Ppl~it~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 338 PPLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred CCcccCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999764
No 59
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=1.9e-61 Score=474.16 Aligned_cols=381 Identities=29% Similarity=0.512 Sum_probs=324.7
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
++|+++++++|+|+||.|||+||||.+++|+++|||+||+|.+|+.++++++..... ...+++..++++++++..
T Consensus 20 ~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~--- 94 (406)
T PRK12381 20 PAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGN--GYTNEPVLRLAKKLIDAT--- 94 (406)
T ss_pred CCCceEEEeecCEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccC--ccCCHHHHHHHHHHHhhC---
Confidence 578999999999999999999999999999999999999999999999987533221 335778899999999985
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 173 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
+.++++|++||+|||+.|+|+++.++..++.+++.+|+.++++|||++.+++++++.+.+...+......+.+.++++
T Consensus 95 ~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-- 172 (406)
T PRK12381 95 FADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYND-- 172 (406)
T ss_pred CCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCC--
Confidence 456999999999999999999998865555456789999999999999999998887666554443333233333322
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcc
Q 013204 174 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 253 (447)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~ 253 (447)
++++++.+. +++++|++||+++++|.++|+.+|+++|+++|++||+++|+||||+|+|++
T Consensus 173 ----------------~~~l~~~l~----~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~ 232 (406)
T PRK12381 173 ----------------LNSASALID----DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRT 232 (406)
T ss_pred ----------------HHHHHHhcc----CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCC
Confidence 367777664 478999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcH
Q 013204 254 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 333 (447)
Q Consensus 254 g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~ 333 (447)
|..++++.+++.||++++||++++| +|+|++++++++++.+. ...+.+|++++|++++++.++|+.++++++
T Consensus 233 G~~~~~~~~~v~pDi~t~sK~l~gG-~~ig~~~~~~~~~~~~~-------~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~ 304 (406)
T PRK12381 233 GELYAYMHYGVTPDVLTTAKALGGG-FPIGAMLTTEKCASVMT-------VGTHGTTYGGNPLASAVAGKVLELINTPEM 304 (406)
T ss_pred cchhhhHhhCCCCCEEEehhhhhCC-CceEEEEEcHHHHhhcC-------CCCCCCCCCCCHHHHHHHHHHHHHHhhccH
Confidence 9888888889999999999999988 89999999999998875 234667899999999999999999888889
Q ss_pred HHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEEE
Q 013204 334 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM 411 (447)
Q Consensus 334 ~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR~ 411 (447)
.++++++++++++.|+++ .+++.+..+++.|.++++++..+.. .....+.+.|+++||++.+.+ +.+||
T Consensus 305 ~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~---------~~~~~~~~~l~~~Gv~v~~~g~~~lRl 375 (406)
T PRK12381 305 LNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYA---------GKAKQISQEAAKAGVMVLIAGPNVVRF 375 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchh---------hHHHHHHHHHHHCCcEEeeCCCCEEEE
Confidence 999999999999999988 5577778899999999998865210 024568889999999998766 68999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 412 SPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 412 ~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
+||+++|+++|++++++|+++++++.+
T Consensus 376 ~p~~~~t~~~i~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 376 APALNISEEEITTGLDRFARACERFVS 402 (406)
T ss_pred eCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999987654
No 60
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=9.2e-61 Score=464.08 Aligned_cols=371 Identities=30% Similarity=0.542 Sum_probs=318.0
Q ss_pred EEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeE
Q 013204 19 IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKV 98 (447)
Q Consensus 19 ~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v 98 (447)
+++++|+++||.|||+||||.+++++.+|||+||+|.+|+.++++++...+. ...+++..++++++++.. +.++|
T Consensus 1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~la~~l~~~~---~~~~v 75 (382)
T PLN00144 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSN--VYHTIPQVELAKRLVASS---FADRV 75 (382)
T ss_pred CeeeeccEEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccc--cccCHHHHHHHHHHHhcC---CCCeE
Confidence 4689999999999999999999999999999999999999999988654322 235788899999999875 35699
Q ss_pred EEeCChhhHHHHHHHHHHHHHHhcCCCC-------cceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCC
Q 013204 99 FFTNSGSEANDTQVKLVWYYNNALGRPN-------KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 171 (447)
Q Consensus 99 ~~~~sGseA~~~Al~~~~~~~~~~~~~~-------~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (447)
+|++||+||++.|||+++.++..++... +.+||.|+++|||++.++++.++.+.++..+....+.+.++++++
T Consensus 76 ~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d 155 (382)
T PLN00144 76 FFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGN 155 (382)
T ss_pred EEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCC
Confidence 9999999999999999998875544322 578999999999999999998887665555443333344444432
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCC
Q 013204 172 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 251 (447)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g 251 (447)
++.+++.+. ++++++|++||++++||.+.++++|+++|+++|++||+++|.|||++|||
T Consensus 156 ------------------~~~l~~~~~---~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~g 214 (382)
T PLN00144 156 ------------------LEAARKLIQ---KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLG 214 (382)
T ss_pred ------------------HHHHHHhcC---CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 367777664 35799999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh
Q 013204 252 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 331 (447)
Q Consensus 252 ~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~ 331 (447)
|+|..++++++++.||+++|||++++| +|+|++++++++++.+. ...+.+|+.++|++++++.++|++++++
T Consensus 215 r~g~~~~~~~~~~~PDi~t~sK~l~~G-~pig~v~~~~~~~~~~~-------~~~~~~T~~~~pl~~aaa~a~l~~i~~~ 286 (382)
T PLN00144 215 RTGYLWAHEAYGVEPDIMTLAKPLAGG-LPIGAVLVTEKVASAIN-------PGDHGSTFAGGPLVCNAALAVLDKISKP 286 (382)
T ss_pred ccchHhhhhhcCCCCCEEEecccccCC-cceEEEEEcHHHHhccC-------CCCCCCCCCCCHHHHHHHHHHHHHHhhc
Confidence 999988888899999999999999998 79999999999998875 2346789999999999999999999988
Q ss_pred cHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC--CE
Q 013204 332 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DN 408 (447)
Q Consensus 332 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g--~~ 408 (447)
++.++++++++++++.|+++ .+++.+..+++.|+++++++... ...+.+.++++||++.+.+ +.
T Consensus 287 ~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~G~~~~l~l~~~-------------~~~~~~~~~~~Gv~i~~~~~~~~ 353 (382)
T PLN00144 287 GFLASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLLVGIQLDVP-------------AGPLVDACRDSGLLVLTAGKGDV 353 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCceeeecCceEEEEEecCc-------------cHHHHHHHHHCCeEEeecCCCCE
Confidence 99999999999999999886 66777889999999999998311 2357889999999998864 78
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 409 IMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 409 iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
||++||+++++++|++++++|++++.++
T Consensus 354 lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 354 VRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred EEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998754
No 61
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=3e-60 Score=466.84 Aligned_cols=383 Identities=26% Similarity=0.373 Sum_probs=312.1
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
++|+++++++|+|+||.|||+||||.++++++++||+||+|.+|+.++++++... ..+++...++++++++..+
T Consensus 34 ~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~----~~~~~~~~~la~~l~~~~p-- 107 (428)
T PRK12389 34 GAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLY----GTPTELEIEFAKMLKEAIP-- 107 (428)
T ss_pred CCCeEEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcc----CCCCHHHHHHHHHHHHhCC--
Confidence 5789999999999999999999999999999999999999999999999875432 3478889999999999864
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCC----CCCC---CCccee
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK----FDLP---APFVLH 166 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~----~~~~---~~~~~~ 166 (447)
+.++++|++||+||++.|||++|.+ +++.+||.|+++|||++.++++.++....... .+.+ .+....
T Consensus 108 ~~~~v~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (428)
T PRK12389 108 SLEKVRFVNSGTEAVMTTIRVARAY------TGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVIT 181 (428)
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHHh------hCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEE
Confidence 4679999999999999999999988 56789999999999999999988764322110 0110 011112
Q ss_pred cCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehh
Q 013204 167 TDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 246 (447)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv 246 (447)
++++ +++.+++.+... ++++++||+||+++++|+++|+++||++|+++|++||+++|+|||
T Consensus 182 ~~~~------------------d~~~l~~~l~~~-~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV 242 (428)
T PRK12389 182 VPFN------------------DIEALKEALDKW-GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEV 242 (428)
T ss_pred cCCC------------------CHHHHHHHHHhc-CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 2211 247777777643 367999999999999999999999999999999999999999999
Q ss_pred hcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHH
Q 013204 247 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK 326 (447)
Q Consensus 247 ~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~ 326 (447)
++|| |+|..++++++|+.||++|+||+++|| +|+|++++++++++.+... +...+++||++||++|++++++|+
T Consensus 243 ~tG~-Rt~~~~a~~~~gv~PDivt~gK~lggG-~Pi~av~~~~~i~~~~~~~----~~~~~~~T~~gnpl~~Aaala~L~ 316 (428)
T PRK12389 243 ITAF-RFMYGGAQDLLGVEPDLTALGKIIGGG-LPIGAYGGRKDIMEQVAPL----GPAYQAGTMAGNPASMAAGIACLE 316 (428)
T ss_pred cccc-ccCcchhhHHhCCCCCeeeechhhcCC-CceeEEeEHHHHHhhhccC----CCcccccCCccCHHHHHHHHHHHH
Confidence 9999 998778888999999999999999999 7999999999999988521 234577899999999999999999
Q ss_pred HHhhhcHHHHHHHHHHHHHHhHhhc-cCCCceeeE-eeeeeEEEEEeecCCCCCCCC--CCCcchHHHHHHHHHHcCceE
Q 013204 327 IYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEI-RGTGLILGTEFADNKSPNEPF--PPEWGIGAYFGAQCEKHGMLV 402 (447)
Q Consensus 327 ~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~Gi~~ 402 (447)
+++++++.+++++++++|++.|+++ .+++.+..+ ++.| ++++++..+....... ..+......+.+.|+++|+++
T Consensus 317 ~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~ 395 (428)
T PRK12389 317 VLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINL 395 (428)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEe
Confidence 9998899999999999999999988 567776666 6666 7788886532110000 001123456888999999999
Q ss_pred EeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 403 RVSGDNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 403 ~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
.+.+.. .+.||+.+|++||++++++|++++++
T Consensus 396 ~~~~~~-~~~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 396 APSKYE-AWFLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred ecCCCC-CeeecCCCCHHHHHHHHHHHHHHHHh
Confidence 876421 24578999999999999999999865
No 62
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=9.6e-60 Score=467.75 Aligned_cols=391 Identities=28% Similarity=0.467 Sum_probs=328.3
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
++|+++++++|+++||.||++||||++++++.++||+||+|++|+.++++++...+. ...++...++++++++++
T Consensus 56 ~~p~~~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~--~~~~~~~~~la~~L~~~~--- 130 (474)
T PLN02624 56 PIPVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSR--AFYNDKFPEFAEYLTSMF--- 130 (474)
T ss_pred CCCceEEeeeeCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCccc--ccCCHHHHHHHHHHHhhc---
Confidence 458999999999999999999999999999999999999999999999998655433 246788999999999986
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHh-cCCC-CcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCC
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNA-LGRP-NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 171 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~-~~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (447)
+.++++|++||+|||+.|||+++.++.. +|.+ ++..|+.+.++|||++.++++.++.+.+...+....+.+.++++.+
T Consensus 131 ~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d 210 (474)
T PLN02624 131 GYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGD 210 (474)
T ss_pred CCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCC
Confidence 4679999999999999999999987433 2322 4568999999999999999998887665555544433334444321
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCC
Q 013204 172 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 251 (447)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g 251 (447)
++.+++.+.. .++.+++||+||+++++|.++|+++||++|+++|++||+++|+||||+|||
T Consensus 211 ------------------~~~l~~~l~~-~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~G 271 (474)
T PLN02624 211 ------------------LDALEKIFEE-DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLA 271 (474)
T ss_pred ------------------HHHHHHHHHh-CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcC
Confidence 3777887764 346799999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh
Q 013204 252 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 331 (447)
Q Consensus 252 ~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~ 331 (447)
++|..++++++++.||++++||++++|++|+|+++.++++++.+. ...+++|++++|++++++.++|+.++++
T Consensus 272 rtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~-------~~~~~~T~~g~pl~~aaa~aaLe~l~~~ 344 (474)
T PLN02624 272 RTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIK-------PGEHGSTFGGNPLASAVAMAALQVVQDE 344 (474)
T ss_pred cCcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhc-------cCCcCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 999988888889999999999999999899999999999888775 2356779999999999999999998888
Q ss_pred cHHHHHHHHHHHHHHhHhhc-cCCC-ceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CE
Q 013204 332 NIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DN 408 (447)
Q Consensus 332 ~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~ 408 (447)
++.+++.++++++++.|+++ .+++ .+.++++.|.+..+.+..+... ......+.+.|+++||++.+.+ +.
T Consensus 345 ~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~-------~~~a~~~~~~L~e~GV~v~p~~~~~ 417 (474)
T PLN02624 345 KLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLG-------PVSAYDVCLKLKERGLLAKPTHDTI 417 (474)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcC-------hHHHHHHHHHHHhCCeEEecCCCCE
Confidence 88899999999999999988 4555 5677899999999888543210 0124568888999999999875 56
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 013204 409 IMMSPPFIMSPEEVDELISKYGKALKATEERVKE 442 (447)
Q Consensus 409 iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~ 442 (447)
+||+||+.+|+++|++++++|++++++-..++..
T Consensus 418 lR~~p~l~~t~e~id~~l~~L~~~l~~~~~~~~~ 451 (474)
T PLN02624 418 IRLAPPLSISEDELQECSKALSDVLEHDLPKLQS 451 (474)
T ss_pred EEEECCccCCHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999999999998776555533
No 63
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=2.7e-60 Score=467.16 Aligned_cols=399 Identities=23% Similarity=0.347 Sum_probs=313.4
Q ss_pred CCCCCeE--EEEecCcEEEeC-CCCEEEecCCccccccCCCCCHHHH--HHHHHHHhcCCcc-cccCcCCChHHHHHHHH
Q 013204 12 TDVHPLV--IEKSEGSYVYDV-NGKKYLDSLAGLWCTALGGSEPRLV--AAATAQLNTLPFY-HSFWNRTTKPSLDLAKE 85 (447)
Q Consensus 12 ~~~~~~~--~~~~~g~~~~d~-dg~~~lD~~~~~~~~~lG~~~p~v~--~a~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ 85 (447)
...+|++ +++++|+++||. |||+||||.+++++.+|||+||+|. +|+.+++.++... .......+++..+++++
T Consensus 14 ~~~~p~~~~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~ 93 (431)
T TIGR03251 14 TDGFDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDT 93 (431)
T ss_pred ccCCceeeEEEeccCCEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHH
Confidence 4566766 599999999996 9999999999999999999999999 9999999875321 12223467788899999
Q ss_pred HHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHH----hcCCCC--cceEEEEcCCCccchhhhhcccCCccccCCCCC
Q 013204 86 LLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN----ALGRPN--KKKFIARQKSYHGSTLIAASLSGLPALHQKFDL 159 (447)
Q Consensus 86 l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~----~~~~~~--~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 159 (447)
+.+...+.+.++++|++||+||||.|||++++|+. .+|+++ +++||.|+++|||++.++++.++...+...+..
T Consensus 94 l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~ 173 (431)
T TIGR03251 94 FARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFP 173 (431)
T ss_pred HHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCC
Confidence 98875334678999999999999999999998852 234332 578999999999999999998886544433221
Q ss_pred CCCcceecCCCCcccCCCCC---CChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHh
Q 013204 160 PAPFVLHTDCPHYWRYAHPG---ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK 236 (447)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~ 236 (447)
.. ...+++.|.. +.+.+. ...+.+..++++++++.+.. .++++++||+||+++++|+++|+++||++|+++|++
T Consensus 174 ~~-~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~ 250 (431)
T TIGR03251 174 KF-DWPRIDNPKL-TFPLDAPNLDQVIALEEEALRQARAAFAE-RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDE 250 (431)
T ss_pred CC-CCccCCCCcc-cCCccccccchhhHHHHHHHHHHHHHHHh-CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHH
Confidence 11 1112222221 111111 11234445667788887764 457899999999999999999999999999999999
Q ss_pred cCCEEEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHH
Q 013204 237 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPV 316 (447)
Q Consensus 237 ~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 316 (447)
||++||+||||+||||+|..|+++++++.||++++||++ |+++++.++++.+....... ....+.+||++||+
T Consensus 251 ~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~-----~~~g~~~~~~i~~~~~~~~~--~~~~~~~T~~gnpl 323 (431)
T TIGR03251 251 HDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKT-----QVCGIMAGRRVDEVADNVFA--VPSRLNSTWGGNLV 323 (431)
T ss_pred cCCEEEEecchhccCccchHHHHHhcCCCCCEEEecccC-----ccceEEecchHHHhhhhccc--CccccCCCCCCCHH
Confidence 999999999999999999999999999999999999997 33445555544332210000 01236689999999
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhc-cCCC-ceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHH
Q 013204 317 SCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ 394 (447)
Q Consensus 317 ~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (447)
++++++++|++++++++.++++++++++++.|+++ .+++ ++.++++.|+++++++.... ....+.+.
T Consensus 324 ~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~-----------~~~~~~~~ 392 (431)
T TIGR03251 324 DMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTA-----------DRDEVIRQ 392 (431)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHH-----------HHHHHHHH
Confidence 99999999999988889999999999999999988 5677 88899999999999985321 24568889
Q ss_pred HHHcCceEEeeC-CEEEEecCCCCCHHHHHHHHHHHHH
Q 013204 395 CEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGK 431 (447)
Q Consensus 395 l~~~Gi~~~~~g-~~iR~~~~~~~t~e~i~~~~~~l~~ 431 (447)
|+++||++.+.+ +.+||+||+.+|++||++++++|++
T Consensus 393 l~~~Gvl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 393 LYREGVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred HHhCCeEEecCCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 999999998876 6799999999999999999999976
No 64
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=6.1e-60 Score=464.97 Aligned_cols=386 Identities=17% Similarity=0.227 Sum_probs=310.7
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
.++|+++++++|+++||.|||+||||.+++++.+|||+||+|.+|+.++++++.. +..+++...++++++++.+
T Consensus 55 ~~~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~----~~~~~~~~~~lAe~l~~~~-- 128 (453)
T PRK07046 55 TPFPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLT----TMLPSEDAAWVGEELARRF-- 128 (453)
T ss_pred CCCCCeEEeeeeCEEEeCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCC----CCCCCHHHHHHHHHHHHHh--
Confidence 3689999999999999999999999999999999999999999999999987532 2447889999999999986
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcc--cCCccccCCC-CCCC---Cccee
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL--SGLPALHQKF-DLPA---PFVLH 166 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~--~~~~~~~~~~-~~~~---~~~~~ 166 (447)
+.++++|++|||||++.|||++|.+ +++++||.|+++|||++...+.. ++.+..+..+ +.+. .....
T Consensus 129 -~~~~v~F~nSGtEA~e~AlrlAR~~------TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~ 201 (453)
T PRK07046 129 -GLPYWQVATTATDANRFVLRWARAV------TGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRV 201 (453)
T ss_pred -CCCEEEEECCHHHHHHHHHHHHHHh------hCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEe
Confidence 4679999999999999999999988 56899999999999996554432 2222111111 1100 00111
Q ss_pred cCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehh
Q 013204 167 TDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 246 (447)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv 246 (447)
+++ ++++.+++.+. ++++++||+||+++++|+++|+++||++|+++|++||++||+|||
T Consensus 202 ~~~------------------nd~~~l~~~l~---~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV 260 (453)
T PRK07046 202 VEF------------------NDLAALEAALA---DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDET 260 (453)
T ss_pred eCC------------------CCHHHHHHHhC---CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcc
Confidence 111 12477777773 367999999999999999999999999999999999999999999
Q ss_pred hcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccC--CCCccCcCCCCCCcHHHHHHHHHH
Q 013204 247 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN--TLGSFSHGFTYSGHPVSCAVAIEA 324 (447)
Q Consensus 247 ~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~t~~~~~~~~~aa~a~ 324 (447)
++ | |.|.....+++|+.||++|+||+++|| +|+|++++++++++.+..... ..+.+.+++||++||++|++++++
T Consensus 261 ~t-f-r~g~Gg~~~~~gv~PDi~t~gK~lggG-~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~ 337 (453)
T PRK07046 261 HT-I-SSGPGGYTRAHGLEPDFLVVGKPIAGG-VPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRAT 337 (453)
T ss_pred cc-C-ccCCcchhHHhCCCccceeehhhhcCC-CcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHH
Confidence 99 5 466555667789999999999999999 799999999999998863211 122345778999999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCC---CCCCcchHHHHHHHHHHcCc
Q 013204 325 LKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEP---FPPEWGIGAYFGAQCEKHGM 400 (447)
Q Consensus 325 l~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~Gi 400 (447)
|++++++++.+++++++++|++.|+++ .+++++..+++.|+++.+.+..+...... .+.+......+...|+++||
T Consensus 338 L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv 417 (453)
T PRK07046 338 LAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGV 417 (453)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCC
Confidence 999988889999999999999999987 67788889999999998887543211100 00012234567788999999
Q ss_pred eEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 401 LVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 401 ~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
++.+.++.++++|+ +|++||++++++++++++++.
T Consensus 418 ~~~~~~~~~~~~p~--~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 418 LITPFHNMMLVCPA--TTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred EEecccCcEEEeCC--CCHHHHHHHHHHHHHHHHHHh
Confidence 99887677899975 999999999999999998753
No 65
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-59 Score=501.95 Aligned_cols=396 Identities=26% Similarity=0.499 Sum_probs=322.7
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
..|+++++++|+++||.|||+||||.+++ ..+||+||+|.+|+.++++++...+ ...++...++++++++.++ .
T Consensus 566 ~~p~~i~~g~G~~l~D~dG~~ylD~~~~~--~~lGh~hp~v~~Ai~~q~~~l~~~~---~~~~~~~~elae~L~~~~p-~ 639 (972)
T PRK06149 566 ADPPQIERGWRHHLFDMAGRSYLDMVNNV--TVLGHGHPRLAAAAARQWSLLNTNS---RFHYAAVAEFSERLAALAP-D 639 (972)
T ss_pred cCCCeEEEeeeeEEEeCCCCEEEECCCCc--cccCCCCHHHHHHHHHHHHhccccc---cccCHHHHHHHHHHHHhCC-C
Confidence 35789999999999999999999999875 5799999999999999998764432 2356788999999999973 4
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCC-CCCCCcceecCCCCc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF-DLPAPFVLHTDCPHY 172 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 172 (447)
+.++++|++||+|||+.|||+++.+ +++++||.++++|||++.++.++++........ ......+..++.|+.
T Consensus 640 ~~~~v~f~~SGsEA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~ 713 (972)
T PRK06149 640 GLDTVFLVNSGSEANDLAIRLAWAA------SGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNT 713 (972)
T ss_pred CcCEEEEeCCchHHHHHHHHHHHHh------cCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcc
Confidence 5679999999999999999999988 567899999999999999887776532111111 111123344555555
Q ss_pred ccCCCCCCC-hhHHHHHHHHHHHHHHHh--hCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcC
Q 013204 173 WRYAHPGET-EEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 249 (447)
Q Consensus 173 ~~~~~~~~~-~~~~~~~~~~~le~~l~~--~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g 249 (447)
++.++...+ ...+ .+++++.+.. ..++++++||+||+++++|.++++++||++|+++|++||+++|+||||||
T Consensus 714 ~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tG 789 (972)
T PRK06149 714 YRGRFRGADSAADY----VRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVG 789 (972)
T ss_pred cCCcCCCcccHHHH----HHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhc
Confidence 543333221 1122 2444444432 23468999999999999999999999999999999999999999999999
Q ss_pred CCcccc-ccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHH
Q 013204 250 FGRLGT-MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY 328 (447)
Q Consensus 250 ~g~~g~-~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~ 328 (447)
|||+|. .|+++++|+.||++|+||+++|| +|+|++++++++++.+... . .+.+|+++||++|++++++|+++
T Consensus 790 fGRtG~~~~a~e~~gv~PDivt~gK~lg~G-~Pl~av~~~~~i~~~~~~~-----~-~~~sT~~gnP~~~aaala~L~~i 862 (972)
T PRK06149 790 YGRLGHYFWGFEQQGVVPDIITMAKGMGNG-HPLGAVITRREIAEALEAE-----G-YFFSSTGGSPVSCRIGMAVLDVL 862 (972)
T ss_pred CCccCccchhhhhcCCCCCEEEecccccCC-eeeEEEEEcHHHHhhhccC-----C-cccCCCCCCHHHHHHHHHHHHHH
Confidence 999997 56899999999999999999999 7999999999999988531 1 23468899999999999999999
Q ss_pred hhhcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-
Q 013204 329 KERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG- 406 (447)
Q Consensus 329 ~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g- 406 (447)
+++++.+++++++++|++.|+++ .+++++..++|.|+|+++++..+..+..+ .......+.+.|+++||++.+.|
T Consensus 863 ~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~---~~~~~~~i~~~l~~~Gvl~~~~g~ 939 (972)
T PRK06149 863 REEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEP---ATEETAAICDRLLELGVIMQPTGD 939 (972)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCC---ChHHHHHHHHHHHhCCeEEeecCC
Confidence 99999999999999999999998 66899999999999999999754322211 11235668899999999999876
Q ss_pred --CEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 407 --DNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 407 --~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
+.+||.||+++|+++|++++++|++++.+
T Consensus 940 ~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 940 HLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999999875
No 66
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=8.9e-60 Score=464.01 Aligned_cols=390 Identities=23% Similarity=0.316 Sum_probs=304.6
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
.++|+++++++|+++||.|||+||||.+++++++|||+||+|.+++.++++++... ..+++...++++++++.++
T Consensus 79 ~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~~----~~~~~~~~~lAe~l~~~~p- 153 (474)
T PLN02482 79 GGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSF----GAPCLLENVLAEMVIDAVP- 153 (474)
T ss_pred CCCCeeEEEeeeCEEEECCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCCC----CCCCHHHHHHHHHHHHhCC-
Confidence 35789999999999999999999999999999999999999999999999885422 4478889999999999974
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchh--hhhcccCCccccCCCCCCCCcceecCCC
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL--IAASLSGLPALHQKFDLPAPFVLHTDCP 170 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (447)
+.++++|++||+||++.|||++|.+ +++++||.|+++|||++. .....++........ .+.......+
T Consensus 154 -~~~~v~f~~SGsEA~e~AlklAR~~------tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~ 223 (474)
T PLN02482 154 -SVEMVRFVNSGTEACMGVLRLARAY------TGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPD---SPGVPKAATS 223 (474)
T ss_pred -CCCEEEEeCChHHHHHHHHHHHHHh------cCCCEEEEECCccCCCcchhhhhcCCCccccCCCC---CCCCCCCCCC
Confidence 3689999999999999999999988 677899999999999763 333333221111000 0000000000
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCC
Q 013204 171 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250 (447)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~ 250 (447)
+... +.+++++++++++.. .++++++||+||+++++|.++|+++||++|+++|++||++||+|||++||
T Consensus 224 ~~~~----------~~~nd~~~l~~~l~~-~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf 292 (474)
T PLN02482 224 ATLT----------APYNDLEAVKKLFEA-NKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF 292 (474)
T ss_pred CeEE----------ecCCChHHHHHHHHh-CCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe
Confidence 0000 111234778887764 34689999999999999999999999999999999999999999999999
Q ss_pred CccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh
Q 013204 251 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 330 (447)
Q Consensus 251 g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~ 330 (447)
|+|..++.+++|+.||++|+||+++|| +|+|++++++++++.+.. .+.+.+++||++||++|++++++|+++++
T Consensus 293 -R~g~~ga~~~~gv~PDi~t~gK~lggG-~Pigav~g~~ei~~~~~~----~~~~~~~~T~~gnpl~~aAala~L~~l~~ 366 (474)
T PLN02482 293 -RIAYGGAQEYFGITPDLTTLGKVIGGG-LPVGAYGGRREIMEMVAP----AGPMYQAGTLSGNPLAMTAGIHTLKRLQQ 366 (474)
T ss_pred -ecCcchHhHHhCCCCCEEEecchhhCC-CceEEEEEcHHHHHhhcc----CCCcccccCcchhHHHHHHHHHHHHHHhc
Confidence 999888889999999999999999998 799999999999998852 12456778999999999999999999988
Q ss_pred hcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCC--CCCCCCcchHHHHHHHHHHcCceEEeeCC
Q 013204 331 RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPN--EPFPPEWGIGAYFGAQCEKHGMLVRVSGD 407 (447)
Q Consensus 331 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~Gi~~~~~g~ 407 (447)
+++.+++++++++|++.|+++ .+++....+.+.+.++++.|..+.... .....+......+.+.|+++||++.+.+.
T Consensus 367 ~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~ 446 (474)
T PLN02482 367 PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQF 446 (474)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCC
Confidence 899999999999999999988 444322222233347778776532110 00001112345688889999999987543
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 408 NIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 408 ~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
..+ .||+.+|++|||++++++++++.+
T Consensus 447 ~~~-~psl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 447 EAG-FTSLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred CCC-cCCCCCCHHHHHHHHHHHHHHHHh
Confidence 222 488999999999999999999865
No 67
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=4.9e-59 Score=455.41 Aligned_cols=386 Identities=21% Similarity=0.315 Sum_probs=308.6
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
.++|+++++++|++|||.|||+||||.+++++.+|||+||+|.+|+.++++++.. +..+++...++++++++.++
T Consensus 33 ~~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~----~~~~~~~~~~la~~L~~~~~- 107 (433)
T PRK00615 33 GITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTS----YGLTSEQEILFAEELFSYLG- 107 (433)
T ss_pred CCCCceEEEeeeCEEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCC----CCCCCHHHHHHHHHHHHhCC-
Confidence 3689999999999999999999999999999999999999999999999987532 13468889999999999873
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccch---hhhhcccCCcccc--CCCCCCCCcceec
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGST---LIAASLSGLPALH--QKFDLPAPFVLHT 167 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~ 167 (447)
...++++|++||+||++.|||++|.+ +++.+||.|.++|||++ .++++.++..... ..+.....
T Consensus 108 ~~~~~v~f~~SGsEA~e~AiklAr~~------tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~----- 176 (433)
T PRK00615 108 LEDHKIRFVSSGTEATMTAVRLARGI------TGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLA----- 176 (433)
T ss_pred CCcCEEEEeCchHHHHHHHHHHHHHh------hCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCC-----
Confidence 33479999999999999999999987 56789999999999987 5666555422110 00100000
Q ss_pred CCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhh
Q 013204 168 DCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI 247 (447)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~ 247 (447)
.......+ +++++++++.+.... +++++||+||+++++|.++|+++||++|+++|++||+++|+||||
T Consensus 177 ---~~~~~~~~--------~~d~~~l~~~l~~~~-~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~ 244 (433)
T PRK00615 177 ---HPLTLSLP--------YNDFQIFQTVMNSLG-HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVV 244 (433)
T ss_pred ---CCCeEeCC--------CCCHHHHHHHHHhcC-CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 00000011 122477888876543 679999999999999999999999999999999999999999999
Q ss_pred cCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHH
Q 013204 248 CAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI 327 (447)
Q Consensus 248 ~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~ 327 (447)
+|| |+|..++++++++.||++++||+++|| +|+|++++++++++.+... +.+.+++|++++|++|++++++|++
T Consensus 245 tG~-R~G~~ga~~~~gv~PDi~~~gK~lggG-~p~~av~~~~~i~~~~~~~----~~~~~~~T~~g~p~~~aa~la~L~~ 318 (433)
T PRK00615 245 TGF-RVAQGGAAAIYHVKPDITVYGKILGGG-LPAAAVVAHKSIMDHLAPE----GTIFQAGTLSGNPLAMAAGKASINL 318 (433)
T ss_pred ccc-cccHhHHHHhcCCCCCeEEEcccccCC-cceeeeeecHHHHhhhcCC----CCcccCCCCcccHHHHHHHHHHHHH
Confidence 999 899888899999999999999999998 7999999999999988521 2345678999999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHHhHhhc-cC--CCceeeEeeeeeEEEEEeecCCCCC--CCCCCCcchHHHHHHHHHHcCceE
Q 013204 328 YKERNIVEQVNKIAPKFQDGVKAF-SD--SPIIGEIRGTGLILGTEFADNKSPN--EPFPPEWGIGAYFGAQCEKHGMLV 402 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~~l~~~L~~l-~~--~~~~~~~~~~g~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~Gi~~ 402 (447)
++++++.++++++++++++.|+++ .+ ++ +..++ .|++++++|.+...+. ............+.+.|+++||++
T Consensus 319 i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~-v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~ 396 (433)
T PRK00615 319 CREQGFYTQLSTLEQNFLSPIEEMIRSQGFP-VSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYL 396 (433)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeee
Confidence 988889999999999999999886 44 34 55666 8999999997543211 111112234557889999999998
Q ss_pred EeeC-CEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 403 RVSG-DNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 403 ~~~g-~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
.+.. ...-++ ..||++|||+++++++++++++
T Consensus 397 ~~~~~~~~~ls--~~ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 397 SPSPFEASFLS--SAHSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred cCcccccccee--cCCCHHHHHHHHHHHHHHHHHH
Confidence 8653 122344 7899999999999999999875
No 68
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=8.3e-61 Score=456.57 Aligned_cols=337 Identities=38% Similarity=0.693 Sum_probs=291.4
Q ss_pred EEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCe
Q 013204 18 VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAK 97 (447)
Q Consensus 18 ~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 97 (447)
+|++++|++++|.|||+|+||.+++++.+|||+||+|.+++.+++.+....+ .....++...++++++.+.++. +.++
T Consensus 1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~-~~~~~~~~~~~la~~L~~~~p~-~~~~ 78 (339)
T PF00202_consen 1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVS-FSGFTHPEAAELAEKLAELFPG-GLDR 78 (339)
T ss_dssp EEEEEEBTEEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCS-TTTSEEHHHHHHHHHHHHHSST-TEEE
T ss_pred CeEEeecCEEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhccccc-ccceeccchhhhhhhhhhcccc-ccce
Confidence 5899999999999999999999999999999999999999999998865543 2345788999999999999843 7889
Q ss_pred EEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCC
Q 013204 98 VFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAH 177 (447)
Q Consensus 98 v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (447)
++|++||+|||+.|||++++++..++.+++.+|+.|+++|||++.++++.++.+.++..+........++|+|+...
T Consensus 79 v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~--- 155 (339)
T PF00202_consen 79 VFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAA--- 155 (339)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHH---
T ss_pred eeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccch---
Confidence 99999999999999999997776666678899999999999999999999888877777766666666777765321
Q ss_pred CCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc
Q 013204 178 PGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF 257 (447)
Q Consensus 178 ~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~ 257 (447)
+.......+++++.+....++++++||+||+++++|.++++++||++|+++|++||+++|+|||+|||||+|+.|
T Consensus 156 -----~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~ 230 (339)
T PF00202_consen 156 -----DEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF 230 (339)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS
T ss_pred -----hhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc
Confidence 223344455666666555567899999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHH
Q 013204 258 GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV 337 (447)
Q Consensus 258 ~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~ 337 (447)
++++++++||++|+||+++|| +|+|++++++++++.+.. ..+++|+.++|++|++++++|+.++++++.+++
T Consensus 231 a~~~~gv~PDiv~~gK~l~gG-~p~sav~~~~~i~~~~~~-------~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~ 302 (339)
T PF00202_consen 231 ASEHYGVDPDIVTFGKGLGGG-LPISAVLGSEEIMEAFQP-------GSHGSTFGGNPLSCAAALATLEILEEEDLLERV 302 (339)
T ss_dssp GHHHHTSSSSEEEEEGGGGTT-SSEEEEEEEHHHHTTSCT-------TSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHH
T ss_pred ceecccccCcccccccchhhh-hhcccccccchhhccccc-------cccccccccchHhhhhhhhHHHhhccHHHHHHH
Confidence 999999999999999999999 899999999999988752 247889999999999999999999999999999
Q ss_pred HHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEee
Q 013204 338 NKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFA 372 (447)
Q Consensus 338 ~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~ 372 (447)
++++++|++.|++| ..++.+..++|.|+++++++.
T Consensus 303 ~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 303 RELGERLREGLRELAARYPLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEETTEEEEEES
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEeeeCeEEEEEEE
Confidence 99999999999999 556999999999999999985
No 69
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=1.1e-58 Score=454.18 Aligned_cols=372 Identities=28% Similarity=0.512 Sum_probs=314.7
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
++|+++++++|++++|.|||+||||.+++++.+|||+||+|.+|+.++++++...+. ...+++..+++++++++.
T Consensus 21 ~~p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~--- 95 (396)
T PRK04073 21 PLPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSR--AFHSDQLGPWYEKVAKLT--- 95 (396)
T ss_pred CCCceEEeeeecEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcccccc--ccCCHHHHHHHHHHHhcC---
Confidence 568999999999999999999999999999999999999999999999988654432 236788899999999875
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHh-cC-CCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCC
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNA-LG-RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 171 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~-~~-~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (447)
+.++++|++||+|||+.|||+++.++.. +| .+++++||.++++|||++.+++++++.+.+...+....+.+.++++++
T Consensus 96 ~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 175 (396)
T PRK04073 96 GKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGD 175 (396)
T ss_pred CCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCC
Confidence 3469999999999999999999987432 23 245788999999999999999988886655554443333333444322
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCC
Q 013204 172 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 251 (447)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g 251 (447)
++++++.+. +++++|++||+++++|.+.++++||++|+++|++||+++|+||+|+|||
T Consensus 176 ------------------~~~l~~~i~----~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g 233 (396)
T PRK04073 176 ------------------LEALKAAIT----PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLG 233 (396)
T ss_pred ------------------HHHHHHhcc----cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCC
Confidence 366666663 4689999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh
Q 013204 252 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 331 (447)
Q Consensus 252 ~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~ 331 (447)
++|..++++++++.||++++||++++|++|+|++++++++++.+.. ..+..|++++|+++++++++|+.++++
T Consensus 234 ~~g~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~-------~~~~~t~~~~~~~~aaa~aaL~~~~~~ 306 (396)
T PRK04073 234 RTGKLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTP-------GSHGSTFGGNPLACAVSIAALEVLEEE 306 (396)
T ss_pred cCcHHHHhhhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhcC-------CCCCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 9998777788899999999999999988999999999999988752 245678999999999999999988778
Q ss_pred cHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEE
Q 013204 332 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIM 410 (447)
Q Consensus 332 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR 410 (447)
++.++.+++++++.+.|+++ ..+.+..+++.|.++.+++... ...+.++|+++||++.+.+ +.||
T Consensus 307 ~l~~~~~~~~~~l~~~L~~l-~~~~i~~~~~~g~~~~~~~~~~-------------~~~~~~~l~~~Gv~~~~~~~~~iR 372 (396)
T PRK04073 307 KLPERSLELGEYFKEQLKEI-DNPMIKEVRGRGLFIGVELNEP-------------ARPYCEALKEEGLLCKETHETVIR 372 (396)
T ss_pred CHHHHHHHHHHHHHHHHHhh-cCCcccceecceEEEEEEecch-------------HHHHHHHHHHCCeEEecCCCCEEE
Confidence 88899999999999999887 3455677889999988887531 3458888999999998765 6799
Q ss_pred EecCCCCCHHHHHHHHHHHHHHH
Q 013204 411 MSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 411 ~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
|+||+.+|+++|++++++|++++
T Consensus 373 i~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 373 FAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred EECCcccCHHHHHHHHHHHHHHh
Confidence 99999999999999999999875
No 70
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2e-58 Score=452.05 Aligned_cols=374 Identities=28% Similarity=0.496 Sum_probs=319.3
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
.+|+++++++|+++||.|||+|+||.+++++++|||+||+|.+|+.++++++..... ...++...++++++++..
T Consensus 12 ~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~--- 86 (389)
T PRK01278 12 RADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSN--LYRIPEQERLAERLVENS--- 86 (389)
T ss_pred CCCceEEeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCcccc--ccCChHHHHHHHHHHhhC---
Confidence 578999999999999999999999999999999999999999999999987543322 236788899999999885
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 173 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
+.++++|++||+||++.|+++++.++...|++++++||+++++|||++.+++..++.+.+...+......+..+++++
T Consensus 87 ~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-- 164 (389)
T PRK01278 87 FADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGD-- 164 (389)
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCC--
Confidence 456999999999999999999998877777777889999999999999999988877655544332222222233222
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcc
Q 013204 174 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 253 (447)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~ 253 (447)
++++++.+. +++++|++||+++++|.++++++++++|+++|++||+++|+||||+|+|++
T Consensus 165 ----------------~~~l~~~l~----~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~ 224 (389)
T PRK01278 165 ----------------IEALKAAIT----PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRT 224 (389)
T ss_pred ----------------HHHHHHhhC----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC
Confidence 377777764 378999999999999989999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcH
Q 013204 254 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 333 (447)
Q Consensus 254 g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~ 333 (447)
|..++++++++.||++++||++++| +|+|++++++++++.+. ...+.+|++++|+++++++++|+.++++++
T Consensus 225 g~~~~~~~~~~~pdi~t~sK~l~~G-~~ig~~~~~~~~~~~~~-------~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~ 296 (389)
T PRK01278 225 GKLFAHEWAGVTPDIMAVAKGIGGG-FPLGACLATEEAAKGMT-------PGTHGSTYGGNPLAMAVGNAVLDVILAPGF 296 (389)
T ss_pred CcceeecccCCCCCEEEEehhccCC-cceEEEEEcHHHHhccC-------CCCCCCCCCccHHHHHHHHHHHHHHhhhHH
Confidence 9877778889999999999999988 89999999999988775 335667899999999999999999887788
Q ss_pred HHHHHHHHHHHHHhHhhc-cCCC-ceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEE
Q 013204 334 VEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIM 410 (447)
Q Consensus 334 ~~~~~~~~~~l~~~L~~l-~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR 410 (447)
.++++++++++++.|+++ ..++ ++..+++.|.++++++..+ ...+.+.|+++||++.+.+ +.+|
T Consensus 297 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~~-------------~~~~~~~l~~~GV~~~p~~~~~lR 363 (389)
T PRK01278 297 LDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVVP-------------NRDLVQALRDEGLLTVGAGDNVVR 363 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEecC-------------HHHHHHHHHHCCeEEeecCCCEEE
Confidence 899999999999999987 4566 7778899999988877431 3468889999999999876 6799
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 411 MSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 411 ~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
|+||+.+++++|++++++|++++++
T Consensus 364 ~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 364 LLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred EeCCcccCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998865
No 71
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=1.2e-56 Score=440.75 Aligned_cols=380 Identities=32% Similarity=0.552 Sum_probs=316.7
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
.++|+++.+++|++++|.||++|+||.+++++++|||+||+|.+++.++++++.... . ...+++..++++++++..
T Consensus 20 ~~~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~-~-~~~~~~~~~l~~~l~~~~-- 95 (403)
T PRK05093 20 APAEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHIS-N-VFTNEPALRLAKKLIDAT-- 95 (403)
T ss_pred CCCCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCccc-C-ccCCHHHHHHHHHHHhhC--
Confidence 367899999999999999999999999999999999999999999999998753322 1 235677889999999985
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCc
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
+.++++|++||+|||+.|+|+++.++..++..+++++|.++++|||++.++++.++.+.+..++........++++++
T Consensus 96 -~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d- 173 (403)
T PRK05093 96 -FAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFND- 173 (403)
T ss_pred -CCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCC-
Confidence 346999999999999999999998865444456789999999999999888887776554444432222233333321
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCc
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 252 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~ 252 (447)
++++++.+. +.+++|++||+++++|.++++.+|+++|+++|++||+++|+||+|+|+|+
T Consensus 174 -----------------~~~l~~~l~----~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~ 232 (403)
T PRK05093 174 -----------------LAAVKAVID----DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGR 232 (403)
T ss_pred -----------------HHHHHHHhc----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCC
Confidence 367777664 46899999999999999989999999999999999999999999999999
Q ss_pred cccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhc
Q 013204 253 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 332 (447)
Q Consensus 253 ~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~ 332 (447)
+|..++.+.+++.||+++|||++++| +|+|++++++++++.+. ...+..+++++|++++++.++|+.+..++
T Consensus 233 ~g~~~~~~~~~~~pdi~s~sK~l~~G-~rig~vv~~~~i~~~l~-------~~~~~~t~~~~~~~~~aa~a~L~~~~~~~ 304 (403)
T PRK05093 233 TGDLFAYMHYGVTPDILTSAKALGGG-FPIGAMLTTAEIASHFK-------VGTHGSTYGGNPLACAVAEAVFDIINTPE 304 (403)
T ss_pred CccchhhhhcCCCCCEEEecccccCC-cceEEEEEcHHHHhhcC-------CCCCCCCCCCCHHHHHHHHHHHHHHhhcc
Confidence 99877777889999999999999987 89999999999998875 22455688899999999999999887778
Q ss_pred HHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEE
Q 013204 333 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIM 410 (447)
Q Consensus 333 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR 410 (447)
+.++++++++++++.|+++ ..++....+++.|.++++.+..... .....+...|+++||++.+.+ +.+|
T Consensus 305 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~---------~~~~~~~~~l~~~Gv~v~~~g~~~lR 375 (403)
T PRK05093 305 VLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYK---------GRARDFLNAAAEEGVMVLVAGPDVLR 375 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcch---------hHHHHHHHHHHHCCeEEecCCCCEEE
Confidence 8899999999999999987 4456667888889999988853210 024568899999999999876 6799
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 411 MSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 411 ~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
++|++.+++++|++++++|++++.++
T Consensus 376 l~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 376 FAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988653
No 72
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=3.8e-55 Score=430.10 Aligned_cols=380 Identities=31% Similarity=0.510 Sum_probs=315.4
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
+.|+++++++|++++|.||++||||++++++.++||+||+|.+|+.+++++....+.. ..++...++++++++.+
T Consensus 18 ~~~~~~~~~~g~~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~--- 92 (401)
T TIGR01885 18 PLPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRA--FYNDVFGEFAEYVTKLF--- 92 (401)
T ss_pred CCCceEEeeecCEEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccc--cCCHHHHHHHHHHHhhc---
Confidence 4678899999999999999999999999999999999999999999999876543322 26788999999999986
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhc-C-CCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCC
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNAL-G-RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 171 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~-~-~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (447)
+.++++|++||++||+.|+++++.++..+ + .+++..|+.++++|||++.++++.++.+.+...++...+....++++
T Consensus 93 ~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 171 (401)
T TIGR01885 93 GYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYN- 171 (401)
T ss_pred CCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCC-
Confidence 35699999999999999999998875432 2 23578899999999999999988877544333333222222222222
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCC
Q 013204 172 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 251 (447)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g 251 (447)
+++++++++... ++++++|++||+++++|.+.|+.+||++|+++|++||+++|+||||+|+|
T Consensus 172 -----------------d~~~le~~l~~~-~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g 233 (401)
T TIGR01885 172 -----------------NLEALEEALEDH-GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLG 233 (401)
T ss_pred -----------------CHHHHHHHHHhc-CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 147788877654 35789999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh
Q 013204 252 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER 331 (447)
Q Consensus 252 ~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~ 331 (447)
++|..++.+++++.||++++||++++|++|+|++++++++++.+.. ..+.+|++++|++++++.++|+.++++
T Consensus 234 ~~G~~~~~~~~~~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~-------~~~~~t~~~~p~~~~aa~a~L~~i~~~ 306 (401)
T TIGR01885 234 RTGKLLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKP-------GEHGSTYGGNPLACAVAVAALEVLEEE 306 (401)
T ss_pred ccchhhHHhhcCCCCCEEEeeccccCCCCCcEEEEEcHHHHhhccC-------CCCCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 9998877777889999999999999988899999999999888752 134568889999999999999999877
Q ss_pred cHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEE
Q 013204 332 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIM 410 (447)
Q Consensus 332 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR 410 (447)
++.++++++++++++.|+++ ..+++..+++.|++..+.+..+... .....+.+.|.++||++.+.+ +.+|
T Consensus 307 ~l~~~~~~~~~~~~~~L~~l-~~~~~~~~~g~g~~~~i~~~~~~~~--------~~~~~l~~~l~~~Gv~v~~~~~~~lR 377 (401)
T TIGR01885 307 KLAENAEKLGEIFRDQLKKL-PKPIITEVRGRGLLNAIVIDESKTG--------RTAWDLCLKLKEKGLLAKPTHGNIIR 377 (401)
T ss_pred cHHHHHHHHHHHHHHHHHhc-cCCceeEEeecCeeEEEEeccCcch--------hHHHHHHHHHHhCCEEEEecCCCEEE
Confidence 88899999999999999988 3466678889999999888543210 024568889999999998875 6799
Q ss_pred EecCCCCCHHHHHHHHHHHHHHH
Q 013204 411 MSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 411 ~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
|+||+.+|+++|++++++|++++
T Consensus 378 i~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 378 LAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred EeCCccCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999876
No 73
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=3.8e-55 Score=430.36 Aligned_cols=372 Identities=33% Similarity=0.587 Sum_probs=311.7
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
..|+++++++|+++||.|||+||||.+++++++|||+||++.+++.+++++...... ..+++...++++++++.++..
T Consensus 24 ~~~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~~~~ 101 (398)
T PRK03244 24 TPPLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSN--LFATEPQIALAERLVELLGAP 101 (398)
T ss_pred CCCceEEEeeecEEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccC--ccCCHHHHHHHHHHHHhCCCC
Confidence 368999999999999999999999999999999999999999999999987543221 235677889999999987433
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 173 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
..++++|++||++|++.|+++++.. +++++|.++++|||++..++..++...+...+......+..+++++
T Consensus 102 ~~~~v~~~~sgsea~~~al~~~~~~-------g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-- 172 (398)
T PRK03244 102 EGGRVFFCNSGAEANEAAFKLARLT-------GRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGD-- 172 (398)
T ss_pred CCCEEEEeCchHHHHHHHHHHHHHH-------CCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCC--
Confidence 3479999999999999999988743 3578999999999999888887775443333322212222222211
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcc
Q 013204 174 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 253 (447)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~ 253 (447)
++++++.+. +++++|++||+++++|.++|+++|+++|+++|++||+++|+||+|+||||+
T Consensus 173 ----------------~~~l~~~~~----~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~ 232 (398)
T PRK03244 173 ----------------VDALAAAVD----DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRT 232 (398)
T ss_pred ----------------HHHHHHhhc----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccc
Confidence 366777663 478999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcH
Q 013204 254 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 333 (447)
Q Consensus 254 g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~ 333 (447)
|..++++++++.||+++|||++++| +|+|++++++++++.+. ...+.+||+++|++++++.++|+.++++++
T Consensus 233 g~~~~~~~~~~~pDi~t~sK~l~~G-~~ig~~~~~~~~~~~~~-------~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~ 304 (398)
T PRK03244 233 GAWFAHQHDGVTPDVVTLAKGLGGG-LPIGACLAFGPAADLLT-------PGLHGSTFGGNPVACAAALAVLDTIASEGL 304 (398)
T ss_pred chHHhhhhhCCCCCEEEEchhhhCC-cccEEEEEcHHHHhhcc-------CCCCcCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 9877788889999999999999988 89999999999988775 234667899999999999999998888889
Q ss_pred HHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEEEe
Q 013204 334 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS 412 (447)
Q Consensus 334 ~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR~~ 412 (447)
.++++++++++++.|+++ +++.+..+++.|.++++.+..+ ....+.+.|+++|+++.+.+ +.+|++
T Consensus 305 ~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~~~------------~~~~~~~~l~~~Gv~~~~~~~~~iR~~ 371 (398)
T PRK03244 305 LENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTAP------------VAKAVEAAAREAGFLVNAVAPDVIRLA 371 (398)
T ss_pred HHHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEEEEEecc------------HHHHHHHHHHHCCeEEeecCCCEEEEE
Confidence 999999999999999987 4566778889999999998532 24568899999999998765 789999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 413 PPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 413 ~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
|++.++++||++++++|++++.+++
T Consensus 372 p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 372 PPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999997654
No 74
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=7.1e-55 Score=429.91 Aligned_cols=398 Identities=26% Similarity=0.486 Sum_probs=323.6
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
..+|+++++++|+++||.||++||||.+++++.+|||+||++.+++.+++++....+. ....++...++++++++..+.
T Consensus 21 ~~~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~~ 99 (425)
T PRK08088 21 QIHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCF-QVLAYEPYLELCEKMNQKVPG 99 (425)
T ss_pred CCCCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccc-cccCCHHHHHHHHHHHHhCCC
Confidence 3568999999999999999999999999999999999999999999999987643211 123467888999999998632
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCc-cccCCCCCCCCcceecCCCC
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPH 171 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 171 (447)
...++++|++||+||++.|||+++.+ +++.+||.|+++|||.+.++++.++.. .+..++......+.++++|.
T Consensus 100 ~~~~~~~f~~sGsea~e~Alklar~~------~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 173 (425)
T PRK08088 100 DFAKKTLLVTTGSEAVENAVKIARAA------TKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPC 173 (425)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHH------hCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCc
Confidence 22259999999999999999999877 456789999999999999988887642 34444443333344444443
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHh-hCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCC
Q 013204 172 YWRYAHPGETEEEYSTRLANNLEDLILK-EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250 (447)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~le~~l~~-~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~ 250 (447)
.+. ..+ ...+++++++++.. ..++++++||+||+++++|.++++++++++|.++|++||+++|.||+|+|+
T Consensus 174 ~~~----~~~----~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~ 245 (425)
T PRK08088 174 PLH----GVS----EDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGA 245 (425)
T ss_pred ccc----Ccc----HHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 211 111 11235678887753 235789999999999999999999999999999999999999999999999
Q ss_pred CccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh
Q 013204 251 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 330 (447)
Q Consensus 251 g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~ 330 (447)
|++|..++++.+++.||+.+|||++++| +|+|++++++++++.+.. ..+.+|++++|++++++.+.|+.++.
T Consensus 246 g~~g~~~~~~~~~~~pdi~s~sK~l~~G-~rig~v~~~~~~~~~~~~-------~~~~~t~~~~~~~~~a~~~~l~~~~~ 317 (425)
T PRK08088 246 GRTGTLFAMEQMGVAADLTTFAKSIAGG-FPLAGVTGRAEVMDAIAP-------GGLGGTYAGNPIACAAALAVLKVFEQ 317 (425)
T ss_pred CcCcchhHHhhcCCCCCEEEEeccccCC-CcceeeEecHHHHhhcCC-------CCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 9999877777888999999999999988 899999999999998852 24567899999999999999999888
Q ss_pred hcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC---
Q 013204 331 RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--- 406 (447)
Q Consensus 331 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g--- 406 (447)
+++.+++++.++++++.|+++ ..++.+..+++.|+++++.+.++..+..+ .......+.+.|+++||++.+.+
T Consensus 318 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~~~~p---~~~~~~~l~~~~~~~Gv~~~~~~~~~ 394 (425)
T PRK08088 318 ENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKP---NAKLTAQIVARARDKGLILLSCGPYY 394 (425)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCCCCCCC---CHHHHHHHHHHHHhCCCEEecCCCCC
Confidence 889999999999999999888 56777888999999999999643221111 11235668899999999887653
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 407 DNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 407 ~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
+.+|++|++.+++++|++++++|++++.++
T Consensus 395 ~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 395 NVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred CEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 779999999999999999999999998764
No 75
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1e-54 Score=424.43 Aligned_cols=366 Identities=32% Similarity=0.499 Sum_probs=305.7
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
.+|+++++++|+++||.|||+||||++++++.+|||+||+|.+++.+++++....+. ...++...++++++.+..
T Consensus 10 ~~~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~--- 84 (377)
T PRK02936 10 RFPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSN--LFTNSLQEEVASLLAENS--- 84 (377)
T ss_pred CCCceEEEeecCEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcccccc--ccCCHHHHHHHHHHHhcC---
Confidence 578999999999999999999999999999999999999999999999987543322 235677788888888764
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 173 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
+.++++|++||++||+.|+++++.+ +++++|++++++|||++...+..++.+.+...+.........++++
T Consensus 85 ~~~~~~~~~sG~~a~~~A~~~a~~~------~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 155 (377)
T PRK02936 85 AGDLVFFCNSGAEANEAALKLARKH------TGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFN--- 155 (377)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHh------cCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCC---
Confidence 3468999999999999999998866 5678899999999999988888776554444433222222222221
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcc
Q 013204 174 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 253 (447)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~ 253 (447)
+++++++.+. +++++|++||+++++|.++++++++++|+++|++||+++|+||+|+|||++
T Consensus 156 ---------------d~~~l~~~~~----~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~ 216 (377)
T PRK02936 156 ---------------DIKALKEVMN----EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRT 216 (377)
T ss_pred ---------------CHHHHHHhcc----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC
Confidence 1366777664 468999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcH
Q 013204 254 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI 333 (447)
Q Consensus 254 g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~ 333 (447)
|.+++++.+++.||++++||++++| +|+|++++++++++.+.. ..+.+|++++|++++++.++|+.+..+++
T Consensus 217 g~~~~~~~~~~~~di~t~sK~l~~G-~~ig~v~~~~~~~~~~~~-------~~~~~t~~~~~~~~aaa~a~l~~~~~~~~ 288 (377)
T PRK02936 217 GTLFAYEQFGLDPDIVTVAKGLGNG-IPVGAMIGKKELGTAFGP-------GSHGSTFGGNPLAMAAAKEVLQVIKQPSF 288 (377)
T ss_pred chhhHHHhhCCCCcEEEEcccccCC-CccEEEEEcHHHHhhccC-------CCCCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 9877777788999999999999987 899999999999988752 23556888999999999999998877788
Q ss_pred HHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEEE
Q 013204 334 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM 411 (447)
Q Consensus 334 ~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR~ 411 (447)
.++++++++++++.|+++ .+++.+..+++.|.++++++.++ ...+.+.|.++||++.+.+ +.+||
T Consensus 289 ~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~-------------~~~~~~~l~~~gv~v~~~g~~~lRi 355 (377)
T PRK02936 289 LEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTEE-------------VAPVIEQLREEGLLVLSAGPNVIRL 355 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecch-------------HHHHHHHHHHCCeEEecCCCCEEEE
Confidence 899999999999999885 55677777888898888887642 3457888999999999877 67999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHH
Q 013204 412 SPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 412 ~~~~~~t~e~i~~~~~~l~~~l 433 (447)
+||+.+++++|++++++|++++
T Consensus 356 ~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 356 LPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred ECCcccCHHHHHHHHHHHHHhC
Confidence 9999999999999999998763
No 76
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=100.00 E-value=9.4e-56 Score=384.85 Aligned_cols=406 Identities=26% Similarity=0.510 Sum_probs=333.9
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
..|+.|++++|.|++|.+|++|||+.++. ..-||+||+|++|...++....... .+.++...+-++.+...++
T Consensus 28 sDP~kivRaq~QYmfDE~g~~yLDCInNV--aHvghchp~VV~A~~kQmat~~tN~---RFlhd~lv~cA~~l~stlP-- 100 (452)
T KOG1403|consen 28 SDPLKIVRAQGQYMFDEEGTRYLDCINNV--AHVGHCHPEVVRAGAKQMATISTNN---RFLHDELVQCARTLTSTLP-- 100 (452)
T ss_pred CCchhhehhccceeeccCcccHHHHhhhh--hhcccCCHHHHHHHHHHHhHhcccc---hhhHHHHHHHHHHHhhcCC--
Confidence 47899999999999999999999999886 5578999999999999988754433 3467888899999988875
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCC-CcceecCCCCc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPA-PFVLHTDCPHY 172 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 172 (447)
+.+-++|++||+|||+.|++++|.+ +++..+|.++.+|||+..-.+.++-- -+..+-+... ..++..|||+.
T Consensus 101 eLsvc~F~NSGSEANDLALRLAR~f------tkhqDvItldHAYHGHl~s~mE~SPY-KF~~g~~v~kpd~VHVAPcPDv 173 (452)
T KOG1403|consen 101 ELSVCFFVNSGSEANDLALRLARNF------TKHQDVITLDHAYHGHLQSVMEVSPY-KFNQGGGVAKPDYVHVAPCPDV 173 (452)
T ss_pred CceEEEEecCCchhhHHHHHHHHhh------cccCceEEEechhccceeeeeeccce-eccCCCCcCCCceeEecCCccc
Confidence 4778999999999999999999988 67889999999999996544443311 1222333333 34567789998
Q ss_pred ccCCCCCCChh--HHHHHHHHHHHHHHHhh--CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc
Q 013204 173 WRYAHPGETEE--EYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 248 (447)
Q Consensus 173 ~~~~~~~~~~~--~~~~~~~~~le~~l~~~--~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~ 248 (447)
|+.+......+ +.+....+++++++... ....++++|.|..|+-||.+.||.+|++.+++..+.+|-+.|.||||+
T Consensus 174 yrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQv 253 (452)
T KOG1403|consen 174 YRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQV 253 (452)
T ss_pred cccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhh
Confidence 87654432211 22233346666666432 345689999999999999999999999999999999999999999999
Q ss_pred CCCcccc-ccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHH
Q 013204 249 AFGRLGT-MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI 327 (447)
Q Consensus 249 g~g~~g~-~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~ 327 (447)
||||.|. .|+++.++..|||++++|.||+| .|+++++.++++.+.+... ......||++||++|+++++++++
T Consensus 254 GFGRvG~hyWafq~y~fiPDIVtmgKpmGNG-hPVa~VattkeIA~Af~at-----gv~YFNTyGGnPVsCAv~laVm~v 327 (452)
T KOG1403|consen 254 GFGRVGSHYWAFQTYNFIPDIVTMGKPMGNG-HPVAAVATTKEIAQAFHAT-----GVEYFNTYGGNPVSCAVGLAVMRV 327 (452)
T ss_pred cccccchhhhhhhhhccccchheecccCCCC-CeeeEEeccHHHHHHhccc-----cceehhccCCCchhHHHHHHHHHH
Confidence 9999997 67899999999999999999999 7999999999999999743 233446999999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHH-cCceEEee
Q 013204 328 YKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS 405 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~ 405 (447)
++.+++.++.++.+.+|...|.++ .+++.+++++|.|+|++|++..+.....|.. +.+..+..+|++ ++|+++..
T Consensus 328 ~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~t---k~A~~~v~rlke~y~VLlsaD 404 (452)
T KOG1403|consen 328 CEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDT---KEAHWVVNRLKELYRVLLSAD 404 (452)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcH---HHHHHHHHHHHHhhhEEEecC
Confidence 999999999999999999999988 7899999999999999999987665444332 235566777765 56888865
Q ss_pred C---CEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 013204 406 G---DNIMMSPPFIMSPEEVDELISKYGKALKATEERVKE 442 (447)
Q Consensus 406 g---~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~ 442 (447)
| +.+.|.||+..+++++++++..|+++|.-+.+++.+
T Consensus 405 GPh~NilKiKPPmCFneena~e~v~~ld~iLT~mee~~~s 444 (452)
T KOG1403|consen 405 GPHRNILKIKPPMCFNEENADEFVLGLDEILTVMEERLAS 444 (452)
T ss_pred CCCCceeecCCCcccChhhHHHHHHHHHHHHHHHHHHHhh
Confidence 5 679999999999999999999999999988777655
No 77
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=4e-54 Score=425.76 Aligned_cols=389 Identities=25% Similarity=0.410 Sum_probs=307.2
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
.++|+++++++|+++||.|||+||||.+++++.++||+||+|++|+.+++++...+ ..+++...++++++++.++.
T Consensus 28 ~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~----~~~~~~~~~lae~l~~~~~~ 103 (423)
T TIGR00713 28 GPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSY----GAPTEAEILLAKEIISRVPS 103 (423)
T ss_pred CCCCeeEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcC----CCCCHHHHHHHHHHHHhCCc
Confidence 35789999999999999999999999999999999999999999999999875432 34677889999999998742
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCc--cccCCCCCCCCcceecCCC
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP--ALHQKFDLPAPFVLHTDCP 170 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 170 (447)
.++++|++||+||++.|+|+++.+ +++++||.++++|||++...+..++.. .....+..... ....+
T Consensus 104 --~~~v~~~~sGseA~e~Alk~ar~~------~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 172 (423)
T TIGR00713 104 --VEMVRFVNSGTEATMSAVRLARGY------TGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVP---EDFAK 172 (423)
T ss_pred --ccEEEEeCCHHHHHHHHHHHHHHh------hCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCC---ccccc
Confidence 469999999999999999999987 456899999999999976666544321 11111110000 00000
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCC
Q 013204 171 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250 (447)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~ 250 (447)
..+.. | +++++++++.+... ++++++||+||+++++|.++++++|+++|+++|++||+++|+||||+||
T Consensus 173 ~~~~~--~--------~~d~~~l~~~i~~~-~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~ 241 (423)
T TIGR00713 173 LTLVL--P--------YNDLEALEEVFEEY-GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGF 241 (423)
T ss_pred ceEEe--C--------CCCHHHHHHHHHHc-CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccc
Confidence 00110 1 11247788877643 3578999999999999988888999999999999999999999999999
Q ss_pred CccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh
Q 013204 251 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 330 (447)
Q Consensus 251 g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~ 330 (447)
|+|..++++++++.||+++|||++++| +|+|++++++++++.+... +.+.+.+|++++|+++++++++|+.+++
T Consensus 242 -r~g~~~~~~~~~~~pDi~t~sK~l~~G-~pig~v~~~~~i~~~~~~~----~~~~~~~T~~~~~~~~aaa~a~l~~~~~ 315 (423)
T TIGR00713 242 -RVALGGAQEYFGVEPDLTTLGKIIGGG-LPVGAFGGRREIMERLAPE----GPVYQAGTLSGNPLAMAAGLATLKLLDE 315 (423)
T ss_pred -ccCcchhHHHhCCCcchhhhhhhhcCC-CceeeeeEHHHHHHhhCcC----CCeeeccCCCCCHHHHHHHHHHHHHHhc
Confidence 888777778889999999999999988 8999999999999988521 1234667999999999999999999987
Q ss_pred hcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCC--CCCCcchHHHHHHHHHHcCceEEeeC-
Q 013204 331 RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEP--FPPEWGIGAYFGAQCEKHGMLVRVSG- 406 (447)
Q Consensus 331 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~Gi~~~~~g- 406 (447)
+++.++++++++++++.|.++ .+++++..+++.|.++++.+..+...+.. ..........+.+.|+++||++.+.+
T Consensus 316 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~ 395 (423)
T TIGR00713 316 EGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQF 395 (423)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCCc
Confidence 788999999999999999876 56777788899999999988643211100 00011123457788999999987654
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 407 DNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 407 ~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
+.+|++|+ +|+++|++++++|++++++
T Consensus 396 ~~~~l~~~--~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 396 EACFLSAA--HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred cceeeECC--CCHHHHHHHHHHHHHHHhh
Confidence 46899976 8999999999999999865
No 78
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=1.3e-53 Score=419.99 Aligned_cols=377 Identities=29% Similarity=0.501 Sum_probs=310.6
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
.+.|+++.+++|+|+||.||++||||++++++.++||+||+|.+++.++++++...+. ...++...++++++++++
T Consensus 21 ~~~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~-- 96 (401)
T PRK00854 21 KPLDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSR--AFRNDQLAPLYEELAALT-- 96 (401)
T ss_pred CCCCceEEeeeeCEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccccc--ccCCHHHHHHHHHHHhhC--
Confidence 3568899999999999999999999999999999999999999999999988654332 235678899999999886
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhc-CC-CCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCC
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNAL-GR-PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP 170 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~-~~-~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (447)
+.++++|++||++|++.||++++.++... |. +++++||+++.+|||++...+..++.+..+..+......+..++++
T Consensus 97 -~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (401)
T PRK00854 97 -GSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFG 175 (401)
T ss_pred -CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCC
Confidence 34689999999999999999998774321 32 3457899999999999988777666554433333222333333332
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCC
Q 013204 171 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250 (447)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~ 250 (447)
+ ++++++.+. +++++|++||+++++|.+.++++||++|+++|++||+++|+||+|+|+
T Consensus 176 d------------------~~~le~~i~----~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~ 233 (401)
T PRK00854 176 D------------------AEALEAAIT----PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGL 233 (401)
T ss_pred C------------------HHHHHHHhC----CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 2 377777664 368899999999999999999999999999999999999999999999
Q ss_pred CccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh
Q 013204 251 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 330 (447)
Q Consensus 251 g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~ 330 (447)
|++|..++.+++++.||++++||++++|++|+|++++++++++.+. ...+..+++++|+++++++++|+.+++
T Consensus 234 g~~g~~~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~-------~~~~~~t~~~~~~~~aa~~a~L~~l~~ 306 (401)
T PRK00854 234 GRTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLK-------PGQHGSTFGGNPLACAVARAALKVLTE 306 (401)
T ss_pred CCCchHhHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhccc-------CCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 9998776667788999999999999999889999999999988774 224556888999999999999998877
Q ss_pred hcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEE
Q 013204 331 RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNI 409 (447)
Q Consensus 331 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~i 409 (447)
+++.++++++++++++.|+++ ....+..+++.|.++.+.+..+.. ....+.+.|+++||++.+.+ +.+
T Consensus 307 ~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~g~g~~~~i~~~~~~~----------~~~~~~~~L~~~GV~v~~~~~~~l 375 (401)
T PRK00854 307 EGMIENAAEMGAYFLEGLRSI-RSNIVREVRGRGLMLAVELEPEAG----------GARQYCEALKERGLLAKDTHDHTI 375 (401)
T ss_pred cCHHHHHHHHHHHHHHHHHhh-ccCceEEEeccceEEEEEEecCch----------hHHHHHHHHHHCCeEEecCCCCEE
Confidence 778899999999999999887 234456678899998887754321 24568899999999998764 689
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 410 MMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 410 R~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
|++|++.+++++|++++++|++++.
T Consensus 376 R~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 376 RLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred EEeCCcccCHHHHHHHHHHHHHHhh
Confidence 9999999999999999999998763
No 79
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=6.3e-54 Score=422.58 Aligned_cols=390 Identities=26% Similarity=0.380 Sum_probs=310.2
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
.+|+++.+++|+++||.||++||||.+++++.+|||+||+|.+++.+++++... ....++...+|++++++.++
T Consensus 31 ~~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~----~~~~~~~~~~la~~L~~~~~-- 104 (426)
T PRK00062 31 GTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLS----FGAPTELEVELAELVIELVP-- 104 (426)
T ss_pred CCCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCc----CCCCCHHHHHHHHHHHHhCC--
Confidence 457899999999999999999999999999999999999999999999987432 13467888999999999863
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCC-CCc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-PHY 172 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 172 (447)
+.++++|++||+|||+.|+|+++.+ +++++||.|+++|||++.+....++........... ... ..+. +..
T Consensus 105 ~~~~v~~~~sGseA~e~Aik~a~~~------~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~ 176 (426)
T PRK00062 105 SIEMVRMVNSGTEATMSAIRLARGY------TGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDS-PGV-PEDFAKHT 176 (426)
T ss_pred CCCEEEEecCHHHHHHHHHHHHHHH------hCCCeEEEEcCccCCchhhhhhccCccccccCCCCC-CCC-Ccccccce
Confidence 4679999999999999999999877 456899999999999997776665432111000000 000 0000 000
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCc
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 252 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~ 252 (447)
++. + +++++++++.+... ++++++||+||+++++|.++++++||++|+++|++||+++|+||||+|+ |
T Consensus 177 ~~~--~--------~~d~~~l~~~i~~~-~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~-r 244 (426)
T PRK00062 177 LTA--P--------YNDLEAVEELFEEY-GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGF-R 244 (426)
T ss_pred EEc--C--------CCCHHHHHHHHHhC-CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcc-c
Confidence 110 1 11247777777543 4679999999999999999999999999999999999999999999999 8
Q ss_pred cccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhc
Q 013204 253 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 332 (447)
Q Consensus 253 ~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~ 332 (447)
+|..++.+++++.||++++||++++| +|+|++++++++++.+... +.+.+.+|++++|+++++++++|+.+++++
T Consensus 245 ~g~~~~~~~~~~~pDi~~~gK~l~~G-~p~ga~~~~~~i~~~~~~~----~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~ 319 (426)
T PRK00062 245 VALGGAQGYYGVTPDLTTLGKIIGGG-LPVGAFGGRREIMEQLAPL----GPVYQAGTLSGNPLAMAAGLATLKLLKEPG 319 (426)
T ss_pred cCCccHHHHhCCCcchHhhhhHhhCC-CcceeeeEHHHHHHhhccC----CCceecccCcCCHHHHHHHHHHHHHHhcch
Confidence 88777788889999999999999988 8999999999999988521 233466789999999999999999998888
Q ss_pred HHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCC--CCCCcchHHHHHHHHHHcCceEEeeC-CE
Q 013204 333 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEP--FPPEWGIGAYFGAQCEKHGMLVRVSG-DN 408 (447)
Q Consensus 333 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~ 408 (447)
+.++++++++++++.|+++ .+++.+..+++.|+++++.+..+...... ...+......+...|+++||++.+.+ +.
T Consensus 320 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~~~ 399 (426)
T PRK00062 320 FYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQFEA 399 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCCcCc
Confidence 9999999999999999887 56788888999999999998753211000 00011234568889999999998865 55
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 409 IMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 409 iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
++++ +.+|+++|++++++|+++++++
T Consensus 400 ~~~~--~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 400 GFVS--AAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred eeee--ccCCHHHHHHHHHHHHHHHHhh
Confidence 7775 8999999999999999998764
No 80
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=3.1e-53 Score=417.41 Aligned_cols=383 Identities=32% Similarity=0.522 Sum_probs=311.1
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
.++|+++.+++|++++|.|||+||||.+++++.++||+||+|.+++.++++++...++. ..++...++++.+.+.+
T Consensus 11 ~~~~~~~~~~~G~~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~-- 86 (400)
T PTZ00125 11 HPLPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRA--FYNDVLGLAEKYITDLF-- 86 (400)
T ss_pred CCCCccEEeeecCEEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccccccc--ccCHHHHHHHHHHHhCC--
Confidence 35688999999999999999999999999999999999999999999999876544332 23566777777777664
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhc-CC-CCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCC
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNAL-GR-PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP 170 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~-~~-~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (447)
+.++++|++||++||+.||++++.++..+ |. +++++||.++++|||++...+..++...+...+......+..++++
T Consensus 87 -~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (400)
T PTZ00125 87 -GYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYN 165 (400)
T ss_pred -CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCC
Confidence 45799999999999999999998654321 21 2468899999999999988888776433222221111112222221
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCC
Q 013204 171 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250 (447)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~ 250 (447)
+++++++.+. .+++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|+
T Consensus 166 ------------------d~~~le~~l~---~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~ 224 (400)
T PTZ00125 166 ------------------DVEALEKLLQ---DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGL 224 (400)
T ss_pred ------------------CHHHHHHHhC---CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 2477888775 2468999999999999999999999999999999999999999999999
Q ss_pred CccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh
Q 013204 251 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 330 (447)
Q Consensus 251 g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~ 330 (447)
|++|..++.+.+++.||++++||++++|++|+|++++++++++.+.. ..+..+++++|++++++.++|+.+++
T Consensus 225 g~~G~~~~~~~~~~~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~-------~~~~~t~~~~~~~~~aa~~~l~~i~~ 297 (400)
T PTZ00125 225 GRTGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKP-------GEHGSTYGGNPLACAVAVEALEVLKE 297 (400)
T ss_pred CccchhhHHHhcCCCCCEEEEcccccCCCcCcEEEEEcHHHHhhccC-------CCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 99998777777889999999999999987799999999999988752 23456888999999999999999887
Q ss_pred hcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CE
Q 013204 331 RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DN 408 (447)
Q Consensus 331 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~ 408 (447)
+++.++++++++++++.|+++ ..++.+..+++.|.++++.+..+.. .....+.+.|+++||++.+.+ +.
T Consensus 298 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~~---------~~~~~~~~~l~~~Gv~v~~~~~~~ 368 (400)
T PTZ00125 298 EKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSDG---------VNAWDLCLKLKENGLLAKPTHDNI 368 (400)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccCcc---------hHHHHHHHHHHHCCeEEeecCCCE
Confidence 788899999999999999887 5556777788899998888764211 024568889999999998865 67
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 409 IMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 409 iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
+||+|++.+++++|++++++|+++++++.
T Consensus 369 lRi~~~~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 369 IRFAPPLVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred EEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999988764
No 81
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=5.3e-52 Score=410.93 Aligned_cols=403 Identities=34% Similarity=0.628 Sum_probs=322.4
Q ss_pred CCCCCCcCccCCCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHH
Q 013204 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 80 (447)
+|++++ ...+|+++++++|++++|.||++||||.++++++++||+||+|.+++.+++.+...+... .+.++...
T Consensus 9 ~~~~~~-----~~~~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~~~~~~~ 82 (413)
T cd00610 9 LWHGYT-----VRPYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLG-FFYNEPAV 82 (413)
T ss_pred cccccc-----CCCCCceEEeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCc-ccCCHHHH
Confidence 477776 236899999999999999999999999999999999999999999999999765433221 13578899
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
++++++++.++ .+.++++|++||++|++.|+++++.+ +++++|++++++|||++...+..++.+.+...+...
T Consensus 83 ~l~~~l~~~~~-~~~~~v~~~~sgsea~~~al~~~~~~------~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 155 (413)
T cd00610 83 ELAELLLALTP-EGLDKVFFVNSGTEAVEAALKLARAY------TGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPL 155 (413)
T ss_pred HHHHHHHHhCC-CCCCEEEEcCcHHHHHHHHHHHHHHH------cCCCeEEEECCCcCCccHHHHHhcCCccccccCCCC
Confidence 99999999973 35789999999999999999998765 456899999999999998888877655444333333
Q ss_pred CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCE
Q 013204 161 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 240 (447)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~ 240 (447)
...+..++++.... . ......++++|++.+... ++++++|++||+++++|.+.++++|+++|.++|++||++
T Consensus 156 ~~~~~~~~~~~~~~-----~--~~~~~~d~~~l~~~l~~~-~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 227 (413)
T cd00610 156 LPGVLHVPYPYRYR-----P--PAELADDLEALEEALEEH-PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGIL 227 (413)
T ss_pred CCCcEEeCCCcccc-----c--hhhHHHHHHHHHHHHhcC-CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 33333333321110 0 011223457777777642 357899999999999999999999999999999999999
Q ss_pred EEEehhhcCCCccccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHH
Q 013204 241 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 320 (447)
Q Consensus 241 li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a 320 (447)
+|+||+|+|+|+.|..++.+.+++.||++++||++++| +|+|++++++++++.+. ...+.+.+|++.+++++++
T Consensus 228 li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~~g-~~~g~~~~~~~~~~~~~-----~~~~~~~~t~~~~~~~~~a 301 (413)
T cd00610 228 LIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLGGG-LPLGAVLGREEIMDAFP-----AGPGLHGGTFGGNPLACAA 301 (413)
T ss_pred EEEeccccCCCcCcchhhHhhcCCCCCeEEEcccccCc-cccEEEEEcHHHHHhhc-----cCCCCCCCCCCcCHHHHHH
Confidence 99999999999998877778889999999999999998 89999999999998861 1134566789999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcC
Q 013204 321 AIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 399 (447)
Q Consensus 321 a~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 399 (447)
+.++|+.++++++.++++++++++++.|+++ ..++.+..+++.|.++.+.+........ .+......+.+.|+++|
T Consensus 302 ~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~g 378 (413)
T cd00610 302 ALAVLEVLEEEGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKP---PDKELAAKIIKAALERG 378 (413)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCC---cchHHHHHHHHHHHHCC
Confidence 9999999888888999999999999999987 3346666778889999988875422110 00113556888999999
Q ss_pred ceEEeeC-CEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 400 MLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 400 i~~~~~g-~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
|++.+.+ +.+|++|++.+|+++|++++++|++++
T Consensus 379 v~v~~~~~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 379 LLLRPSGGNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred eEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 9999874 779999999999999999999998764
No 82
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.6e-51 Score=401.07 Aligned_cols=363 Identities=27% Similarity=0.440 Sum_probs=296.3
Q ss_pred CCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCC
Q 013204 15 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK 94 (447)
Q Consensus 15 ~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 94 (447)
.|+++++++|+|+||.||++||||.+++++.+||| ||+|.+++.++++++..... ...++...++++.++.. .
T Consensus 11 ~~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~----~ 83 (375)
T PRK04260 11 AAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPN--LYLNSLQEEVAQKLIGD----K 83 (375)
T ss_pred CCceEEEeeeCEEEeCCCCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCcccC--ccCCHHHHHHHHHHhcC----c
Confidence 57899999999999999999999999999999999 99999999999987543221 22455566666665432 2
Q ss_pred CCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCccc
Q 013204 95 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 174 (447)
Q Consensus 95 ~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (447)
...++|++||+|||+.|+++++.+ +++++|++++++|||++..++..++.......+......+...++
T Consensus 84 ~~~~~~~~SGseA~~~Al~~ar~~------~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 152 (375)
T PRK04260 84 DYLAFFCNSGAEANEAAIKIARKA------TGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIF----- 152 (375)
T ss_pred CCEEEEcCccHHHHHHHHHHHHHh------cCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCC-----
Confidence 236799999999999999999866 456789999999999998888877654433333321111111111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccc
Q 013204 175 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 254 (447)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g 254 (447)
++++++++.+. +++++|++||+++++|.+.++.+||+++.++|++||+++|+||+|+|+|+.|
T Consensus 153 -------------~dl~~l~~~l~----~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g 215 (375)
T PRK04260 153 -------------NDLNSVKALVN----KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTG 215 (375)
T ss_pred -------------CCHHHHHHhcC----CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc
Confidence 12466776553 4689999999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHH
Q 013204 255 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV 334 (447)
Q Consensus 255 ~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~ 334 (447)
..+.++.+++.||+++|||++++| +|+|++++++++++.+.. ..+.+|+.++|++++++.++|+.++.+++.
T Consensus 216 ~~~~~~~~~~~pdi~t~sK~l~~G-~~ig~~~~~~~~~~~~~~-------~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~ 287 (375)
T PRK04260 216 KLYAFEHYGIEPDIFTLAKGLANG-VPVGAMLAKSSLGGAFGY-------GSHGSTFGGNKLSMAAASATLDIMLTAGFL 287 (375)
T ss_pred chhhhHhhCCCCCEEEecccccCC-cceEEEEEcHHHHhhcCC-------CCCCCCCCcCHHHHHHHHHHHHHHHhhHHH
Confidence 877777789999999999999988 799999999999888752 235578999999999999999998878889
Q ss_pred HHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEEEe
Q 013204 335 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS 412 (447)
Q Consensus 335 ~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR~~ 412 (447)
++++++++++++.+.++ ..++.+..+++.|+++++.+... ...+.++|+++||++.+.+ +.+|++
T Consensus 288 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~~~~l~~~Gi~v~~~~~~~lR~~ 354 (375)
T PRK04260 288 EQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETTAD-------------LSQLVEAARDKGLIVLTAGTNVIRLL 354 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeeEEeccceEEEEEecCc-------------HHHHHHHHHhCCCEEecCCCCEEEEc
Confidence 99999999999999876 55666678888999999988421 3458899999999998776 679999
Q ss_pred cCCCCCHHHHHHHHHHHHHHH
Q 013204 413 PPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 413 ~~~~~t~e~i~~~~~~l~~~l 433 (447)
||+.+++++|++++++|++++
T Consensus 355 ~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 355 PPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred CCCccCHHHHHHHHHHHHHhC
Confidence 999999999999999998753
No 83
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.1e-51 Score=404.13 Aligned_cols=374 Identities=33% Similarity=0.581 Sum_probs=307.4
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
..+|+++++++|+++||.|||+|+||.+++++++|||+||++.+++.+++++..... ...+++...++++++++..
T Consensus 19 ~~~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~la~~l~~~~-- 94 (396)
T PRK02627 19 GRLPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTS--NLYYIEPQEELAEKLVELS-- 94 (396)
T ss_pred cCCCceEEeeeeCEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccc--cccCCHHHHHHHHHHHhhc--
Confidence 356899999999999999999999999999999999999999999999998753221 1346788899999999884
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCc
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
+.++++|++||++|++.|+++++.+....+. +++++++++++|||++..++..++.+.+...+......+..++++
T Consensus 95 -~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~-~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 170 (396)
T PRK02627 95 -GMDKVFFCNSGAEANEAAIKLARKYGHKKGI-EKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFN-- 170 (396)
T ss_pred -CCCEEEECCCcHHHHHHHHHHHHHHhcccCC-CCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCC--
Confidence 5589999999999999999999876422221 237899999999999988888776554433222111111112211
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCc
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 252 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~ 252 (447)
+++++++.+. +++++|++||+++++|..+++++++++|.++|++||+++|+||+|+|||+
T Consensus 171 ----------------d~~~l~~~i~----~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~ 230 (396)
T PRK02627 171 ----------------DIEALKAAIT----DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGR 230 (396)
T ss_pred ----------------CHHHHHHhcC----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCc
Confidence 1366777663 46899999999999998889999999999999999999999999999999
Q ss_pred cccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhc
Q 013204 253 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 332 (447)
Q Consensus 253 ~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~ 332 (447)
+|..++++.+++.||+++|||++++| +|+|++++++++++.+. ...+..+++.++++++++.++|+.++.++
T Consensus 231 ~g~~~~~~~~~~~pdi~t~sK~~~~G-~rig~~~~~~~~~~~~~-------~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 302 (396)
T PRK02627 231 TGKLFAYQHYGIEPDIMTLAKGLGGG-VPIGAVLAKEKVADVFT-------PGDHGSTFGGNPLACAAALAVIEIIEEEG 302 (396)
T ss_pred cCceeeehhcCCCCCEEEEcchhhCC-cccEEEEEcHHHHhccC-------CCCCCCCCCCCHHHHHHHHHHHHHHhhcc
Confidence 99877777788999999999999977 89999999999988775 22356788999999999999999887778
Q ss_pred HHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEE
Q 013204 333 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIM 410 (447)
Q Consensus 333 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR 410 (447)
+.++++++++++++.|+++ ..++.+..+++.|.++++.+.. . ...+.+.|+++||++.+.+ +.+|
T Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~-~------------~~~~~~~l~~~Gv~v~~~~~~~lR 369 (396)
T PRK02627 303 LLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELDR-P------------AAEIVKKALEKGLLINVTGDNVLR 369 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEecC-c------------HHHHHHHHHHCCeEEeecCCCEEE
Confidence 8899999999999999887 5566667788889998888721 1 3468889999999999876 6699
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 411 MSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 411 ~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
++|++.+++++|++++++|++++++
T Consensus 370 i~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 370 LLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred EECCcccCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998865
No 84
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=1.1e-51 Score=406.03 Aligned_cols=377 Identities=22% Similarity=0.359 Sum_probs=289.1
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcC
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS 93 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (447)
..|+++++++|+++||.|||+||||.+++|+.+|||+||+|.+|+.++++++.. +..++....++++++++.++
T Consensus 29 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~----~~~~~~~~~~la~~l~~~~p-- 102 (431)
T PRK06209 29 LAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCN----FTRPSAIELDAAESFLELID-- 102 (431)
T ss_pred CCCeEEEeccCCEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcC----CCCCCHHHHHHHHHHHHhCC--
Confidence 568999999999999999999999999999999999999999999999988642 23356666789999999874
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEE-cCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR-QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~-~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
..++++|++||+||++.|||++|.+ +++.+|+.+ .++|||........+ + ... +.+... ....
T Consensus 103 ~~~~v~f~~sGseA~e~AlklAr~~------tgr~~i~~~~~~~~h~~~~~~~g~~--~-~~~--~~~~~~-~~~~---- 166 (431)
T PRK06209 103 GADMVKFCKNGSDATSAAVRLARAY------TGRDLVARCADHPFFSTDDWFIGTT--P-MSA--GIPASV-SALT---- 166 (431)
T ss_pred ccceEEEecCHHHHHHHHHHHHHHH------hCCCeEEEeccCccccccccccccC--C-CCC--CCChhH-hccc----
Confidence 3469999999999999999999988 456788888 678877421110000 0 000 000000 0000
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCc
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 252 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~ 252 (447)
..+.+++++++++++.. .++++++||+||++++ .|+.+||++|+++|++||++||+|||++|+++
T Consensus 167 ----------~~~~~~d~~~l~~~l~~-~~~~~aavi~Epv~g~----~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~ 231 (431)
T PRK06209 167 ----------VTFRYNDIASLEALFED-HPGRIACVILEPATAD----EPQDGFLHEVRRLCHENGALFILDEMITGFRW 231 (431)
T ss_pred ----------cccCCCCHHHHHHHHHh-CCCCEEEEEEccccCC----CCCHHHHHHHHHHHHHcCCEEEEEcccccCCc
Confidence 01122235788888864 3468999999999876 77899999999999999999999999999976
Q ss_pred cccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHH--hhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh
Q 013204 253 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEV--IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 330 (447)
Q Consensus 253 ~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~ 330 (447)
.+ .++.+++++.||++++||+++|| +|+|++++++++++. +... ...+.+.+++|+++||++|++++++|+++++
T Consensus 232 ~~-~g~~~~~gv~PDi~t~gK~lggG-~p~~av~~~~~i~~~~~~~~~-~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~ 308 (431)
T PRK06209 232 HM-RGAQKLYGIVPDLSCFGKALGNG-FAVSALAGKREYMELGGLEHT-DRERVFLLSTTHGAETHALAAAIATMAIYRD 308 (431)
T ss_pred Cc-chhhHHhCCCcceeeehhhhcCC-cccEEEEEHHHHHhhhccccc-CCCCceeeccCCCCCHHHHHHHHHHHHHHhc
Confidence 42 23344689999999999999999 799999999999887 3211 1123556788999999999999999999998
Q ss_pred hcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeCCEE
Q 013204 331 RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNI 409 (447)
Q Consensus 331 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g~~i 409 (447)
+++.++++++++++++.|+++ .++++...+++.|.+..+.+........+ .......+.+.|+++|+++.+ +
T Consensus 309 ~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~Gi~~p~----l 381 (431)
T PRK06209 309 EDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQP---SQAFRTLFLQETIRRGVLMPS----L 381 (431)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCC---cHHHHHHHHHHHHHCCccccc----c
Confidence 899999999999999999887 56788878888888877776532111110 111234577889999998732 4
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 013204 410 MMSPPFIMSPEEVDELISKYGKALKATEER 439 (447)
Q Consensus 410 R~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 439 (447)
+++ ..||++||++++++|++++.++++.
T Consensus 382 ~is--~~ht~~dId~~l~~l~~~l~~~~~~ 409 (431)
T PRK06209 382 VVS--YAHGDADIERTIDAVHGALGVYRKA 409 (431)
T ss_pred ccc--ccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 555 6889999999999999999988554
No 85
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=3.6e-46 Score=364.94 Aligned_cols=371 Identities=36% Similarity=0.608 Sum_probs=293.7
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
.++|+++++++|++++|.||++||||.+++++++|||+||.+.+++.+++.+...... ..+++...++++++++.+
T Consensus 7 ~~~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~la~~~-- 82 (379)
T TIGR00707 7 GRLPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSN--LYYTEPQEELAEKLVEHS-- 82 (379)
T ss_pred CCCCccEEEeecCEEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccccc--ccCCHHHHHHHHHHHhhC--
Confidence 4689999999999999999999999999999999999999999999999987533211 236778999999999997
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCc
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
+.+++++++||++|++.|+++++.+....+ +++++|++++++|||+...+...++...+.............+++
T Consensus 83 -g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~-~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 157 (379)
T TIGR00707 83 -GADRVFFCNSGAEANEAALKLARKYTGDKG-KEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPY--- 157 (379)
T ss_pred -CCCEEEEeCCcHHHHHHHHHHHHHHhhccC-CCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCC---
Confidence 456999999999999999998865432111 235889999999999988877766544322111111111111111
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCc
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 252 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~ 252 (447)
++++++++.+. +.+++|+++|+++++|..+++.+++++|.++|++||+++|+||+|++||+
T Consensus 158 ---------------~d~~~l~~~~~----~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~ 218 (379)
T TIGR00707 158 ---------------NDIESLKKAID----DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGR 218 (379)
T ss_pred ---------------CCHHHHHHHhh----hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 12467777664 25678899999999998888999999999999999999999999999998
Q ss_pred cccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhc
Q 013204 253 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 332 (447)
Q Consensus 253 ~g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~ 332 (447)
.|..+.+...++.||+++|||++++| +|+|++++++++++.+.. ..+..+++.++++++++.++|+.++..+
T Consensus 219 ~g~~~~~~~~~~~~d~~t~sK~~~~G-~riG~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~aaL~~~~~~~ 290 (379)
T TIGR00707 219 TGKFFAYEHYGIEPDIITLAKGLGGG-VPIGATLAKEEVAEAFTP-------GDHGSTFGGNPLACAAALAVLEVIEKER 290 (379)
T ss_pred cchhhhHHhcCCCCCEEEEcccccCC-cccEEEEEcHHHHhhhcC-------CCCCCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 88655555668889999999999976 899999999999988852 2344577889999999999999887777
Q ss_pred HHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEE
Q 013204 333 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIM 410 (447)
Q Consensus 333 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR 410 (447)
+.++++++++++++.|+++ ..... ..+++.|.++.+.+..+ ...+.+.|+++||++.+.+ +.+|
T Consensus 291 ~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~g~~~~~~~~~~-------------~~~~~~~l~~~Gv~v~~~~~~~lR 356 (379)
T TIGR00707 291 LLENVKEKGDYFKERLEELGKNYPN-KEVRGKGLMLGIELEAP-------------CKDIVKKALEKGLLVNCAGPKVLR 356 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCC-CccccCceEEEEEecCc-------------HHHHHHHHHHCCcEEeeCCCCEEE
Confidence 8899999999999999876 33332 34456788877776532 2457888999999999876 6799
Q ss_pred EecCCCCCHHHHHHHHHHHHHHH
Q 013204 411 MSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 411 ~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
++|++.++++++++++++|++++
T Consensus 357 i~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 357 FLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred EECCCcCCHHHHHHHHHHHHHhC
Confidence 99999999999999999998753
No 86
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-47 Score=339.56 Aligned_cols=392 Identities=23% Similarity=0.362 Sum_probs=303.4
Q ss_pred CCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHH--hcCCcccccCcCCChHHHHHH-HHHHHhcC
Q 013204 15 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQL--NTLPFYHSFWNRTTKPSLDLA-KELLEMFT 91 (447)
Q Consensus 15 ~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~--~~~~~~~~~~~~~~~~~~~l~-~~l~~~~~ 91 (447)
|+.-+.++-|+|++|.|||.+||..+.+.+.++||+||.++.++++.- ..+......-.+|.+...+.. +.+.+. .
T Consensus 58 F~~dYEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn~P~LvK~a~~p~~~~~lvnRPALg~fP~kd~~~~l~~~ll~~-A 136 (484)
T KOG1405|consen 58 FFVDYEKSIGNYLVDVDGNRLLDVYSQISSVPLGYNNPALVKAAQQPQNATMLVNRPALGNFPPKDFAEKLRQSLLSI-A 136 (484)
T ss_pred EehhhhhhcCceEEecCCCeeehhhhhhcccccCCCCHHHHHHhcChHHHHHHhccccccCCChhhHHHHHHHHHHhh-C
Confidence 455577899999999999999999999999999999999998866532 111111111123433333322 223333 3
Q ss_pred cCCCCeEEEeCChhhHHHHHHHHHHHH--HHhcCC------------------CCcceEEEEcCCCccchhhhhcccCCc
Q 013204 92 ASKMAKVFFTNSGSEANDTQVKLVWYY--NNALGR------------------PNKKKFIARQKSYHGSTLIAASLSGLP 151 (447)
Q Consensus 92 ~~~~~~v~~~~sGseA~~~Al~~~~~~--~~~~~~------------------~~~~~vi~~~~~yhg~~~~~~~~~~~~ 151 (447)
+-+.+.|.+..+|+.|||+|+|.++.+ +..+|. .+.-.|+.|.++|||++++.++.+.+.
T Consensus 137 PKG~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SK 216 (484)
T KOG1405|consen 137 PKGQKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSK 216 (484)
T ss_pred cchHHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCCCCceeeeeeccccccccccccccccCc
Confidence 557778999999999999999976533 233332 124589999999999999999988776
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCCh----hHHHHHHHHHHHHHHHhhC--CCcEEEEEEccccCCCCCccCChh
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETE----EEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPAT 225 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~le~~l~~~~--~~~~a~vi~epv~~~~G~~~~~~~ 225 (447)
..++ +++|...+...++|.+ .+|.+.. ..-...|++++|+++.+.. ...++++|+||+|++||....+++
T Consensus 217 pIHK-ldiPaFdWPiA~fP~y---kYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~ 292 (484)
T KOG1405|consen 217 PIHK-LDIPAFDWPIAPFPRY---KYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPD 292 (484)
T ss_pred cccc-cCCCCCCCCCCCCccc---cCChhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHH
Confidence 5543 4555555566666642 3333211 1234567899999998743 347999999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCC--CCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCC
Q 013204 226 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI--KPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG 303 (447)
Q Consensus 226 ~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~--~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~ 303 (447)
|++.|+++|++||+.+|+||||||.|.+|+.|++++|++ .||+|||||.|-.|+ ..-.++++ +..
T Consensus 293 Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~gG-----ffh~~~fr--------pn~ 359 (484)
T KOG1405|consen 293 FFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTGG-----FFHDEEFR--------PNE 359 (484)
T ss_pred HHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhhcCc-----cccCcccC--------CCc
Confidence 999999999999999999999999999999999999998 489999999765432 22223321 112
Q ss_pred ccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhc-cCCC-ceeeEeeeeeEEEEEeecCCCCCCCC
Q 013204 304 SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPF 381 (447)
Q Consensus 304 ~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~ 381 (447)
++.+..||.+.|.-+.-..+++++++++++.+++...++.|..+|.+| .++| .+..++|.|.+.++++++..
T Consensus 360 pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~~------ 433 (484)
T KOG1405|consen 360 PYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPSGS------ 433 (484)
T ss_pred hHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCChH------
Confidence 455667999999988888889999999999999999999999999999 6676 67788999999999988754
Q ss_pred CCCcchHHHHHHHHHHcCceEEeeCC-EEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 382 PPEWGIGAYFGAQCEKHGMLVRVSGD-NIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 382 ~~~~~~~~~~~~~l~~~Gi~~~~~g~-~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
....++..+.-+|+.+..||. .|||.|++..++.+.+-++++|.+.++.
T Consensus 434 -----~Rdk~i~~~~~nGv~~GGCg~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 434 -----IRDKLILIARLNGVNLGGCGDKSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred -----HHHHHHHHHHHcCceecccccceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 345688888999999999985 4999999999999999999999998864
No 87
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=3.1e-36 Score=296.16 Aligned_cols=352 Identities=18% Similarity=0.228 Sum_probs=240.1
Q ss_pred CCCCCeEEEEecCcEEEeCCCCEEEecCCccccccCC-CCCHHHHHHHHHHHhcCC---cccccCcCCChHHHHHHHHHH
Q 013204 12 TDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALG-GSEPRLVAAATAQLNTLP---FYHSFWNRTTKPSLDLAKELL 87 (447)
Q Consensus 12 ~~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~ 87 (447)
+.+.++++.+++|+++||.||++||||+++ +++| |+||+|++|+.+++++.. ..++.....++...+++++++
T Consensus 25 ~~~~~~~~~~~~G~~~~d~~g~~~ld~~s~---~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la 101 (402)
T PRK07505 25 EGLNGLTVGEREGILITLADGHTFVNFVSC---SYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALS 101 (402)
T ss_pred cccccceeeccCCccEEecCCceEEEeecC---CccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHH
Confidence 355678899999999999999999999884 6888 999999999999998743 111111235778899999999
Q ss_pred HhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceec
Q 013204 88 EMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHT 167 (447)
Q Consensus 88 ~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (447)
+.++ . ++++++||++|++.+++++..... .+++.++|+++++|||+...... .... ...+..+
T Consensus 102 ~~~~---~-~~~~~~sG~~a~~~ai~~~~~~~~---~~~~~~vi~~~~~~H~s~~~~~~------~~~~----~~~v~~~ 164 (402)
T PRK07505 102 ELFG---A-SVLTFTSCSAAHLGILPLLASGHL---TGGVPPHMVFDKNAHASLNILKG------ICAD----ETEVETI 164 (402)
T ss_pred HHhC---C-CEEEECChHHHHHHHHHHHHhccc---CCCCCCEEEEchhhhHhHHhhhh------hhhc----CCeEEEe
Confidence 9863 2 677888999999999998753211 12456788999999996422110 0000 0112223
Q ss_pred CCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhh
Q 013204 168 DCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI 247 (447)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~ 247 (447)
++++ ++++++.+. +++.+++++||++++|+ +.+ +++|.++|++||++||+||+|
T Consensus 165 ~~~d------------------~~~l~~~~~---~~~~~~vl~~p~~~~G~-~~~----~~~i~~l~~~~~~~li~DEa~ 218 (402)
T PRK07505 165 DHND------------------LDALEDICK---TNKTVAYVADGVYSMGG-IAP----VKELLRLQEKYGLFLYIDDAH 218 (402)
T ss_pred CCCC------------------HHHHHHHHh---cCCCEEEEEecccccCC-cCC----HHHHHHHHHHcCCEEEEECcc
Confidence 3221 367777664 24578999999998865 444 899999999999999999998
Q ss_pred --cCCCccccccccccCCC-CCCee----eecccCCCcccceeEEE-eChhHHHHhhhccCCCCccCcCCCCC--CcHHH
Q 013204 248 --CAFGRLGTMFGCDKYSI-KPDLV----SFAKALSSAYMPIGAIL-VSPEVSEVIHSQSNTLGSFSHGFTYS--GHPVS 317 (447)
Q Consensus 248 --~g~g~~g~~~~~~~~~~-~~d~v----~~sK~l~gg~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~t~~--~~~~~ 317 (447)
+++|++|..++.+.++. .||.+ ++||++++++ |+++ .++++++.+.. +.+..+++ .++++
T Consensus 219 ~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~-------~~~~~t~~~~~~~~a 288 (402)
T PRK07505 219 GLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGDAEQIELILR-------YAGPLAFSQSLNVAA 288 (402)
T ss_pred cccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCCHHHHHHHHH-------hCCCceeCCCCCHHH
Confidence 56788887666677776 67744 6899988642 5665 47788888763 23334554 45689
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEE-EEEeecCCCCCCCCCCCcchHHHHHHHHH
Q 013204 318 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLIL-GTEFADNKSPNEPFPPEWGIGAYFGAQCE 396 (447)
Q Consensus 318 ~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 396 (447)
+++++++++.+.++.+.+....+.+.++ .+..+ ....+++.+.++ .+.+.... ....+.+.|+
T Consensus 289 ~aa~~a~l~~~~~~~~~~~~~~l~~~~~-~~~~~----~~~~~~g~~~~i~~~~~~~~~-----------~~~~~~~~l~ 352 (402)
T PRK07505 289 LGAILASAEIHLSEELDQLQQKLQNNIA-LFDSL----IPTEQSGSFLPIRLIYIGDED-----------TAIKAAKQLL 352 (402)
T ss_pred HHHHHHHHHHHhccCcHHHHHHHHHHHH-HHHHH----HHhcCCCCCCCEEEEEeCCHH-----------HHHHHHHHHH
Confidence 9999999987655444332222222211 12111 001123333332 22222110 2456888999
Q ss_pred HcCceEEee-------C-CEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 397 KHGMLVRVS-------G-DNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 397 ~~Gi~~~~~-------g-~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
++||++.+. + +.+||+|++.+|++++++++++|++++++
T Consensus 353 ~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 353 DRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred HCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 999999864 2 57999999999999999999999988753
No 88
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=2.2e-35 Score=293.73 Aligned_cols=355 Identities=15% Similarity=0.208 Sum_probs=256.1
Q ss_pred CeEEEEecCcEEEeCCCCEEEecCCccccccCCC-CCHHHHHHHHHHHhcCCccc---ccCcCCChHHHHHHHHHHHhcC
Q 013204 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYH---SFWNRTTKPSLDLAKELLEMFT 91 (447)
Q Consensus 16 ~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~ 91 (447)
.+++.+++|++++ .||++|+||+++. ++|. +||++.+++.+++++++.++ +.+.++.+...++++++++++.
T Consensus 93 ~~~~~~~~G~~i~-~~G~~~id~~s~~---~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~ 168 (481)
T PLN02822 93 PPVLESAAGPHTI-INGKDVVNFASAN---YLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG 168 (481)
T ss_pred CCceecCCCCeEE-ECCceEEEeECCC---cCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC
Confidence 3478899999999 8999999998874 3443 69999999999998854432 2345688999999999999984
Q ss_pred cCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCC
Q 013204 92 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 171 (447)
Q Consensus 92 ~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (447)
..+.++|++ |..++..+++.. .++..+|++++.||++...++.+++.... ..+.
T Consensus 169 --~~~~i~~s~-G~~a~~sai~a~---------~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~------------~~~~-- 222 (481)
T PLN02822 169 --TPDSILYSY-GLSTIFSVIPAF---------CKKGDIIVADEGVHWGIQNGLYLSRSTIV------------YFKH-- 222 (481)
T ss_pred --CCCEEEECC-HHHHHHHHHHHh---------CCCCCEEEEeCCccHHHHHHHHHcCCeEE------------EECC--
Confidence 345677665 455788888855 33456777899999987666655543211 1111
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHhh------CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEeh
Q 013204 172 YWRYAHPGETEEEYSTRLANNLEDLILKE------GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADE 245 (447)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~------~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DE 245 (447)
.+ .++++..+... .++..++|++|++++++|.+.+ |++|+++|++||++||+||
T Consensus 223 --------nd--------~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~----L~~i~~l~~k~~~~LIvDE 282 (481)
T PLN02822 223 --------ND--------MESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP----LDEIVRLKEKYRFRVLLDE 282 (481)
T ss_pred --------CC--------HHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEEC
Confidence 11 13344433321 1223489999999999999888 9999999999999999999
Q ss_pred hhc--CCCccccccccccCCC---CCCeee--ecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCc--HH
Q 013204 246 VIC--AFGRLGTMFGCDKYSI---KPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH--PV 316 (447)
Q Consensus 246 v~~--g~g~~g~~~~~~~~~~---~~d~v~--~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~--~~ 316 (447)
+|+ .+|++|.+ ..+++++ .+|+++ |||+++..+ |++++++++++.+.. ..++.+|+++ |.
T Consensus 283 a~s~gvlG~~G~G-~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~~ii~~~~~-------~~~~~~fsa~lPp~ 351 (481)
T PLN02822 283 SNSFGVLGKSGRG-LSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSARVVDHQRL-------SSSGYVFSASLPPY 351 (481)
T ss_pred CccccccCCCCCC-hHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCHHHHHHHHh-------cCCceeeccccCHH
Confidence 998 33555544 5678887 688887 779997322 678999999998762 2344566655 78
Q ss_pred HHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHH
Q 013204 317 SCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC 395 (447)
Q Consensus 317 ~~~aa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 395 (447)
.+++++++|+.++. ++..++++++++++++.|+++.+..+ ...+.+.++.+.+.+... ....+......+.++|
T Consensus 352 ~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~--~~~~~spi~~l~l~~~~~---~~~~~~~~~~~~~~~L 426 (481)
T PLN02822 352 LASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLSI--GSNTLSPIVFLHLEKSTG---SAKEDLSLLEHIADRM 426 (481)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCccc--CCCCCCCEEEEEeCCCcc---cccchHHHHHHHHHHH
Confidence 88889899988765 66889999999999999987632222 223445666677643211 1111112345688888
Q ss_pred H-HcCceEEeeC----------CEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 396 E-KHGMLVRVSG----------DNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 396 ~-~~Gi~~~~~g----------~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
+ ++||++.+.. ..+|++.+..+|+++|++++++|++++.++
T Consensus 427 l~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 427 LKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASV 478 (481)
T ss_pred HhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 7 8899999651 359999889999999999999999998775
No 89
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=9.4e-34 Score=278.94 Aligned_cols=335 Identities=17% Similarity=0.167 Sum_probs=243.5
Q ss_pred CCCEEEecCCccccccCCC-CCHHHHHHHHHHHhcCCcc---cccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhh
Q 013204 31 NGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 106 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGse 106 (447)
+|+++++|+++ ++||. +||+|++++.++++++... ++...+.++...+++++++++++ .+++++++||++
T Consensus 43 ~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g---~~~~~~~~SG~~ 116 (406)
T PRK13393 43 GPREVTVWCSN---DYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG---KEAALLFTSGYV 116 (406)
T ss_pred CCccEEEeecc---cccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC---CCcEEEeCCcHH
Confidence 46899999988 77887 7999999999999876442 22223456678999999999973 468999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHH
Q 013204 107 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS 186 (447)
Q Consensus 107 A~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (447)
||+.|++.+.. ..+..+|+++..||+++..++...+... ...+..
T Consensus 117 An~~ai~~l~~-------~~~g~~I~~~~~~H~s~~~~~~~~g~~~------------~~~~~~---------------- 161 (406)
T PRK13393 117 SNWAALSTLGS-------RLPGCVILSDELNHASMIEGIRHSRAEK------------RIFRHN---------------- 161 (406)
T ss_pred HHHHHHHHhhc-------CCCCCEEEEccchhHHHHHHHHHcCCeE------------EEeCCC----------------
Confidence 99999995421 1124588889999999877765443221 011111
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc-CC-CccccccccccCCC
Q 013204 187 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AF-GRLGTMFGCDKYSI 264 (447)
Q Consensus 187 ~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~-g~-g~~g~~~~~~~~~~ 264 (447)
+.+++++.+....++.+++|++|++++++|.+.| +++|.++|++||+++|+||+|+ |+ |+.|..+ .++.++
T Consensus 162 --d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~-~~~~~~ 234 (406)
T PRK13393 162 --DPADLERKLSDLDPHRPKLVAFESVYSMDGDIAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGI-AEREGL 234 (406)
T ss_pred --CHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch-hhhcCC
Confidence 1366777765543346789999999999999888 9999999999999999999997 65 6666544 355565
Q ss_pred C--CCee--eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhc-HHHHHHH
Q 013204 265 K--PDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN-IVEQVNK 339 (447)
Q Consensus 265 ~--~d~v--~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~-~~~~~~~ 339 (447)
. +|++ +|||+++.. .|++++++++++.+.... .. ...+.+.+|.+++++.++|+.+++.. ..+++++
T Consensus 235 ~~~~~i~~~tlsKa~g~~---GG~~~~~~~~~~~l~~~~---~~--~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~ 306 (406)
T PRK13393 235 ADRLTIIEGTLAKAFGVM---GGYITGSAALCDFIRSFA---SG--FIFTTSLPPAVAAGALASVRHLKASSAERERHQD 306 (406)
T ss_pred CCCCeEEEEeCchhhccc---CceeeCCHHHHHHHHHhC---cC--ceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 4 5776 899999852 267888999888876321 11 11356678888999999999875432 3355667
Q ss_pred HHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHH-cCceEEee-------C-CEEE
Q 013204 340 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------G-DNIM 410 (447)
Q Consensus 340 ~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~-------g-~~iR 410 (447)
+++++++.|+++ +.+. +++.+.++.+.+.+.. ....+.++|++ +||++.+. + +.+|
T Consensus 307 ~~~~l~~~L~~~-g~~~---~~~~~~i~~v~~~~~~-----------~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iR 371 (406)
T PRK13393 307 RVARLRARLDKA-GIPH---LPNPSHIVPVMVGDPV-----------LCKQISDELLDRYGIYVQPINYPTVPRGTERLR 371 (406)
T ss_pred HHHHHHHHHHHc-CCCc---CCCCCCeEEEEeCCHH-----------HHHHHHHHHHHhCCEEEEeECCCCCCCCCceEE
Confidence 888899988775 3332 2456777666543211 24557888887 59998753 2 5799
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 411 MSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 411 ~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
++|++.+|++||++++++|++.+.++
T Consensus 372 is~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 372 ITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999987653
No 90
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=3.7e-33 Score=264.17 Aligned_cols=339 Identities=21% Similarity=0.311 Sum_probs=259.4
Q ss_pred EEecCcEEEeCCCCEEEecCCccccccCCC-CCHHHHHHHHHHHhcCCc---ccccCcCCChHHHHHHHHHHHhcCcCCC
Q 013204 20 EKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEMFTASKM 95 (447)
Q Consensus 20 ~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 95 (447)
.+..+.++. .+|++++||+|+ ++||. +||++++++.+++++.+. .++...++.+.+.+|++++++++ +.
T Consensus 27 ~~~~~~~~~-~~~~~~~nf~SN---dYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~---g~ 99 (388)
T COG0156 27 DRRQGLAIR-ADGRKVLNFCSN---DYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL---GA 99 (388)
T ss_pred cccCCccee-cCCceeEeeecc---CcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh---CC
Confidence 333455554 679999999988 67775 799999999999988433 34456789999999999999997 67
Q ss_pred CeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccC
Q 013204 96 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY 175 (447)
Q Consensus 96 ~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (447)
+++++++||..||..++... .+++.+|+.+--.|.+...+..+++...+
T Consensus 100 e~al~f~SGy~AN~~~i~~l---------~~~~dli~~D~lnHASiidG~rls~a~~~---------------------- 148 (388)
T COG0156 100 EAALLFSSGFVANLGLLSAL---------LKKGDLIFSDELNHASIIDGIRLSRAEVR---------------------- 148 (388)
T ss_pred CcEEEEcccchhHHHHHHHh---------cCCCcEEEEechhhhhHHHHHHhCCCcEE----------------------
Confidence 78999999999999999977 34578888888999997777766654322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhhCCC--cEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcc
Q 013204 176 AHPGETEEEYSTRLANNLEDLILKEGPE--TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 253 (447)
Q Consensus 176 ~~~~~~~~~~~~~~~~~le~~l~~~~~~--~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~ 253 (447)
.|.|+++++||+++...... +...|++|.|++|.|.+.| |++|+++|++|+++|++||+|+ +|..
T Consensus 149 --------~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa-~Gv~ 215 (388)
T COG0156 149 --------RFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDEAHA-VGVL 215 (388)
T ss_pred --------EecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCC----HHHHHHHHHHhCcEEEEEcccc-cccc
Confidence 13445579999999763211 4679999999999999999 9999999999999999999997 7677
Q ss_pred cc--ccccccCCCCCC---ee--eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHH
Q 013204 254 GT--MFGCDKYSIKPD---LV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK 326 (447)
Q Consensus 254 g~--~~~~~~~~~~~d---~v--~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~ 326 (447)
|. .+..+++|+.++ ++ ||||++|+.+ |++.+++.+.+.+... .+++ .++.+.+|..++++.++|+
T Consensus 216 G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~~~~d~L~~~---ar~~--ifStalpP~~aaa~~~al~ 287 (388)
T COG0156 216 GPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGSAALIDYLRNR---ARPF--IFSTALPPAVAAAALAALR 287 (388)
T ss_pred CCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCcHHHHHHHHHh---CCce--eccCCCCHHHHHHHHHHHH
Confidence 75 334577787643 33 7999999643 7899999999998753 2233 3466677888888999999
Q ss_pred HHhh-hcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee
Q 013204 327 IYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS 405 (447)
Q Consensus 327 ~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~ 405 (447)
.+++ ++.+++++++..+++..++.. .+.. ......+..+.+.++. .+..+...|+++||++.+.
T Consensus 288 ~l~~~~~~r~~L~~~~~~~~~~~~~~-~~~~---~~s~s~I~pv~~gd~~-----------~a~~~s~~l~~~Gi~v~~i 352 (388)
T COG0156 288 ILEEGPERRERLQELAAFFRSLLKAL-GLVL---LPSESPIIPVILGDEE-----------RALEASRALLEEGIYVSAI 352 (388)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHhc-CCcc---CCCCCCeeeeEeCCHH-----------HHHHHHHHHHHCCeeEeee
Confidence 8875 567889999999998666553 1111 1222334445555432 3566888999999998854
Q ss_pred -------C-CEEEEecCCCCCHHHHHHHHHHHHHH
Q 013204 406 -------G-DNIMMSPPFIMSPEEVDELISKYGKA 432 (447)
Q Consensus 406 -------g-~~iR~~~~~~~t~e~i~~~~~~l~~~ 432 (447)
| .++|++++..+|+++|+++++.|.++
T Consensus 353 ~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 353 RPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred cCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 2 56999999999999999999998864
No 91
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=1.8e-32 Score=269.80 Aligned_cols=336 Identities=20% Similarity=0.234 Sum_probs=240.7
Q ss_pred CCCCEEEecCCccccccCCC-CCHHHHHHHHHHHhcCCccc---ccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 013204 30 VNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYH---SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGS 105 (447)
Q Consensus 30 ~dg~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGs 105 (447)
.+|+++++|+|+ ++||. +||+|++|+.+++++....+ +...+.++...+|++++++.+. .+++++++||+
T Consensus 42 ~~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g---~~~~l~~~sG~ 115 (402)
T TIGR01821 42 DGAKDVTVWCSN---DYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG---KESALVFTSGY 115 (402)
T ss_pred CCCeeEEEeEcc---CcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC---CCeEEEECchH
Confidence 346999999887 55664 79999999999998855432 2233567788999999999973 35789999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHH
Q 013204 106 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 185 (447)
Q Consensus 106 eA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (447)
+||+.+++++... .+..+++.+..||++....+...+.+.. ..+.+
T Consensus 116 ~an~~ai~~l~~~-------~~~~~v~~~~~~h~s~~~~~~~~g~~~~------------~~~~~--------------- 161 (402)
T TIGR01821 116 VANDATLATLAKI-------IPGCVIFSDELNHASMIEGIRHSGAEKF------------IFRHN--------------- 161 (402)
T ss_pred HHHHHHHHHhhCC-------CCCCEEEEcchHhHHHHHHHHHcCCeEE------------EECCC---------------
Confidence 9999999987421 1245677777899987666654443211 01111
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc-CC-CccccccccccCC
Q 013204 186 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AF-GRLGTMFGCDKYS 263 (447)
Q Consensus 186 ~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~-g~-g~~g~~~~~~~~~ 263 (447)
+.+++++++....++.+++|++|++++++|.+.| +++|.++|++||++||+||+|+ |+ |..|.. ..+..+
T Consensus 162 ---d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g~g-~~~~~~ 233 (402)
T TIGR01821 162 ---DVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRGGG-IAERDG 233 (402)
T ss_pred ---CHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCCCc-cchhcc
Confidence 1367777776543446789999999999998887 9999999999999999999998 32 333332 234555
Q ss_pred C--CCCee--eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh-cHHHHHH
Q 013204 264 I--KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER-NIVEQVN 338 (447)
Q Consensus 264 ~--~~d~v--~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~-~~~~~~~ 338 (447)
+ .+|++ +|||++++. .|++++++++++.+..... . ..++.+.+|+++++++++|+.+++. .+.++..
T Consensus 234 ~~~~~div~~t~sKa~g~~---GG~i~~~~~~~~~l~~~~~---~--~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~ 305 (402)
T TIGR01821 234 LMHRIDIIEGTLAKAFGVV---GGYIAASRKLIDAIRSYAP---G--FIFTTSLPPAIAAGATASIRHLKESQDLRRAHQ 305 (402)
T ss_pred CCCCCeEEEEechhhhccC---CceeecCHHHHHHHHHhCc---C--ceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHH
Confidence 4 46877 899999852 2678889999888863211 1 1235567899999999999987654 3456667
Q ss_pred HHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHH-cCceEEee-------C-CEE
Q 013204 339 KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------G-DNI 409 (447)
Q Consensus 339 ~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~-------g-~~i 409 (447)
++++++++.|+++ +.+.+ .+.+.++.+.+.... .+..+.+.|++ +||++.+. + +.+
T Consensus 306 ~~~~~l~~~L~~~-g~~~~---~~~~~i~~i~~~~~~-----------~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~l 370 (402)
T TIGR01821 306 ENVKRLKNLLEAL-GIPVI---PNPSHIVPVIIGDAA-----------LCKKVSDLLLNKHGIYVQPINYPTVPRGTERL 370 (402)
T ss_pred HHHHHHHHHHHHc-CCCcC---CCCCCEEEEEeCCHH-----------HHHHHHHHHHhcCCEEEEeECCCCCCCCCceE
Confidence 8888999988876 33322 234556666543211 23457788764 59998763 2 579
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 410 MMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 410 R~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
|++|++.+|++||++++++|+++++++
T Consensus 371 Ris~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 371 RITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999988653
No 92
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=4.5e-32 Score=267.51 Aligned_cols=334 Identities=20% Similarity=0.240 Sum_probs=239.1
Q ss_pred CCEEEecCCccccccCCCC-CHHHHHHHHHHHhcCCccc---ccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhH
Q 013204 32 GKKYLDSLAGLWCTALGGS-EPRLVAAATAQLNTLPFYH---SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA 107 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA 107 (447)
|++++||+|+ ++||++ ||++++++.+++++....+ +...++++...++++++++++. .++.++++||++|
T Consensus 45 ~~~~~~~~s~---dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g---~~~~~~~~sG~~a 118 (407)
T PRK09064 45 EREVTVWCSN---DYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG---KEAALVFTSGYVS 118 (407)
T ss_pred CceEEEEECC---CCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC---CCcEEEECcHHHH
Confidence 6999999888 778875 9999999999998754322 2223467889999999999863 3567888999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
|+.+++++... .++.+++.+..+|++....+...+.+. ...+.
T Consensus 119 n~~ai~~l~~~-------~~~~~i~~~~~~h~s~~~~~~~~~~~~------------~~~~~------------------ 161 (407)
T PRK09064 119 NDATLSTLAKL-------IPDCVIFSDELNHASMIEGIRRSRCEK------------HIFRH------------------ 161 (407)
T ss_pred HHHHHHHHhCC-------CCCCEEEEeCcchHHHHHHHHHcCCcE------------EEECC------------------
Confidence 99999987521 124556656566777655544333221 00111
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc-C-CCccccccccccCCC-
Q 013204 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A-FGRLGTMFGCDKYSI- 264 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~-g-~g~~g~~~~~~~~~~- 264 (447)
++++++++++....++++++|++|++++++|.+.+ +++|.++|++||++||+||+|+ | +|+.|..+ .++.++
T Consensus 162 ~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~-~~~~~~~ 236 (407)
T PRK09064 162 NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRGGGI-AERDGLM 236 (407)
T ss_pred CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCCCCh-HHhcCCC
Confidence 11377888776543346789999999999998887 9999999999999999999997 5 46666543 345554
Q ss_pred -CCCee--eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhc-HHHHHHHH
Q 013204 265 -KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN-IVEQVNKI 340 (447)
Q Consensus 265 -~~d~v--~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~-~~~~~~~~ 340 (447)
.+|++ +|||+++.. .|++++++++++.+..... . ...+.+.+|+++++++++++.+++.+ ..++++++
T Consensus 237 ~~~div~~t~sKa~g~~---GG~~~~~~~~~~~l~~~~~---~--~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~ 308 (407)
T PRK09064 237 DRIDIIEGTLAKAFGVM---GGYIAGSAALVDAVRSYAP---G--FIFTTSLPPAIAAAALASIRHLKESNEERERHQER 308 (407)
T ss_pred CCCeEEEEecchhhhcc---CceEecCHHHHHHHHHhCc---c--ccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 46887 899999742 2678899998887753211 1 12355678888999999999887543 45778889
Q ss_pred HHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHH-cCceEEee-------C-CEEEE
Q 013204 341 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------G-DNIMM 411 (447)
Q Consensus 341 ~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~-------g-~~iR~ 411 (447)
++++++.|+++ +..++ ...+.++.+.+.+.. ....+.++|++ +||++.+. + +.+|+
T Consensus 309 ~~~l~~~L~~~-g~~~~---~~~~~iv~i~~~~~~-----------~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRi 373 (407)
T PRK09064 309 AAKLKAALDAA-GIPVM---PNESHIVPVMVGDPE-----------KCKKASDMLLEEHGIYVQPINYPTVPRGTERLRI 373 (407)
T ss_pred HHHHHHHHHHc-CCCCC---CCCCCEEEEEeCCHH-----------HHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEE
Confidence 99999999876 33322 123555555543211 24457788775 59999753 2 56999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 412 SPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 412 ~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
+|++.+|++|+++++++|+++++++
T Consensus 374 s~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 374 TPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999988654
No 93
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=3.4e-31 Score=256.46 Aligned_cols=338 Identities=18% Similarity=0.153 Sum_probs=244.2
Q ss_pred CCEEEecCCccccccCCC-CCHHHHHHHHHHHhcCCcc---cccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhH
Q 013204 32 GKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA 107 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA 107 (447)
++++++|+|+ ++||. +||++++++.+++++++.+ ++...+.+..+.+|++++++++ +.+.+++++||+.|
T Consensus 101 ~r~~l~FsSn---dYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~---g~e~all~sSGy~A 174 (476)
T PLN02955 101 FKKLLLFSGN---DYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK---KKEDCLVCPTGFAA 174 (476)
T ss_pred CceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH---CCCcEEEECChHHH
Confidence 4689999888 66774 7999999999999886543 3456678889999999999997 66789999999999
Q ss_pred HHHHHHHHHHHHH---hcC--CCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCCh
Q 013204 108 NDTQVKLVWYYNN---ALG--RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE 182 (447)
Q Consensus 108 ~~~Al~~~~~~~~---~~~--~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (447)
|..++..+..... ..+ ..+++.+|+.+...|.+...++..+.... +. ...
T Consensus 175 N~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~-----~a-----~~~--------------- 229 (476)
T PLN02955 175 NMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQG-----NV-----EVF--------------- 229 (476)
T ss_pred HHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccC-----Cc-----eEE---------------
Confidence 9999986521100 000 02346678889999999766665442100 00 000
Q ss_pred hHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc--ccccc
Q 013204 183 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFGCD 260 (447)
Q Consensus 183 ~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~--~~~~~ 260 (447)
.|.|+++++|++++..... ..++|++|+++++.|.++| |++|.++|++||++||+||+|+ +|..|+ .+..+
T Consensus 230 -~f~HND~~~Le~~L~~~~~-~~~~Vv~EgV~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~-~Gv~G~~G~G~~e 302 (476)
T PLN02955 230 -VYRHCDMYHLNSLLSSCKM-KRKVVVTDSLFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHG-TFVCGENGGGVAE 302 (476)
T ss_pred -EeCCCCHHHHHHHHHhCCC-CceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCcEEEEccccc-CceecCCCCcHHH
Confidence 1234446999999876543 4578999999999999988 9999999999999999999997 557776 44567
Q ss_pred cCCCCCCe----eeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh-hcHHH
Q 013204 261 KYSIKPDL----VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVE 335 (447)
Q Consensus 261 ~~~~~~d~----v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~~~~ 335 (447)
++++.+|+ .+|||++|. ..|++++++++++.+.... +.+. ++.+.+|..+++++++++++.+ +..++
T Consensus 303 ~~g~~~di~ii~~TLsKA~G~---~GGfi~gs~~~~~~l~~~~---~~~i--fStalpp~~aaa~laal~l~~~~~~~r~ 374 (476)
T PLN02955 303 EFNCEADVDLCVGTLSKAAGC---HGGFIACSKKWKQLIQSRG---RSFI--FSTAIPVPMAAAAYAAVVVARKEKWRRK 374 (476)
T ss_pred HhCCCCCCcEEEEeCccchhc---cCceeecHHHHHHHHHHhC---CCCe--ecccccHHHHHHHHHHHHHHhcCHHHHH
Confidence 88887665 479999983 2357999999998887432 1222 2334456667778888988754 34567
Q ss_pred HHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-------C-C
Q 013204 336 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------G-D 407 (447)
Q Consensus 336 ~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------g-~ 407 (447)
+++++.+++++.+ .+ +. ...++.+.+.++. .+..+.++|+++|+++.+. + .
T Consensus 375 ~L~~n~~~fr~~~-G~---~~------~sPI~pI~ig~~~-----------~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~ 433 (476)
T PLN02955 375 AIWERVKEFKALS-GV---DI------SSPIISLVVGNQE-----------KALKASRYLLKSGFHVMAIRPPTVPPNSC 433 (476)
T ss_pred HHHHHHHHHHHhc-CC---CC------CCCEEEEEeCCHH-----------HHHHHHHHHHHCCCEEEEECCCCCCCCCc
Confidence 7888888887632 21 21 1344455555432 3456889999999999854 2 4
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 408 NIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 408 ~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
++|++.+..||++||+.++++|.++...+
T Consensus 434 rLRi~lsA~Ht~edId~lv~~L~~~~~~~ 462 (476)
T PLN02955 434 RLRVTLSAAHTTEDVKKLITALSSCLDFD 462 (476)
T ss_pred eEEEeeCCCCCHHHHHHHHHHHHHHHhhh
Confidence 69999999999999999999998886554
No 94
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-30 Score=254.34 Aligned_cols=340 Identities=16% Similarity=0.203 Sum_probs=236.6
Q ss_pred CCCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcc---cccCcCCChHHHHHHHHHHHh
Q 013204 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEM 89 (447)
Q Consensus 13 ~~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~ 89 (447)
...+++..++.|.+++|.+||+|||+. +||++++++.+++++.+.. ++.+....+...+|+++++++
T Consensus 42 ~~~~~~~~~~~g~~~~~~~~~~YL~l~----------~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~ 111 (407)
T PRK07179 42 NGKHLVLGKTPGPDAIILQSNDYLNLS----------GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAF 111 (407)
T ss_pred CCceEEeecCCCCcEEEeecCCccCCC----------CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHH
Confidence 456788889999999999999999986 6899999999999764322 233333446788999999998
Q ss_pred cCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCC
Q 013204 90 FTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC 169 (447)
Q Consensus 90 ~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (447)
+ +.+++++++||++||+.+++.+. ..++.|++ +...|..........+... .++
T Consensus 112 ~---g~~~~~~~~sG~~An~~~l~~l~--------~~g~~v~~-~~~~h~s~~~~~~~~g~~~--------------~~~ 165 (407)
T PRK07179 112 T---GFESCLLCQSGWAANVGLLQTIA--------DPNTPVYI-DFFAHMSLWEGVRAAGAQA--------------HPF 165 (407)
T ss_pred h---CCCcEEEECCHHHHHHHHHHHhC--------CCCCEEEE-ECCcCHHHHHHHHHCCCeE--------------EEe
Confidence 7 34578999999999999999763 12344544 4555555433322222110 011
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcC
Q 013204 170 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 249 (447)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g 249 (447)
.+.++++|++.+.. .++++|+++++++++|.+.| +++|.++|++||+++|+||+|+
T Consensus 166 ----------------~~~d~~~l~~~l~~---~~~~lV~v~~v~n~tG~i~p----l~~I~~l~~~~~~~livDea~~- 221 (407)
T PRK07179 166 ----------------RHNDVDHLRRQIER---HGPGIIVVDSVYSTTGTIAP----LADIVDIAEEFGCVLVVDESHS- 221 (407)
T ss_pred ----------------cCCCHHHHHHHHHh---cCCeEEEECCCCCCCCcccc----HHHHHHHHHHcCCEEEEECccc-
Confidence 01124778887753 23578999999999999888 8999999999999999999997
Q ss_pred CCcccccc--ccccCCCC--CCeee--ecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHH
Q 013204 250 FGRLGTMF--GCDKYSIK--PDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIE 323 (447)
Q Consensus 250 ~g~~g~~~--~~~~~~~~--~d~v~--~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a 323 (447)
+|..|..+ ....+++. +|+++ ++|++++ ++|++++++++++.+..... ...+++|. .+..++++.+
T Consensus 222 ~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~---~~G~l~~~~~~~~~~~~~~~---~~~~~~t~--~~~~~aa~~a 293 (407)
T PRK07179 222 LGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG---RAGIITCPRELAEYVPFVSY---PAIFSSTL--LPHEIAGLEA 293 (407)
T ss_pred ccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc---cCeEEEeCHHHHHHHHHhCc---CeeeCCCC--CHHHHHHHHH
Confidence 54443321 23455653 47765 6899964 68999999998887753210 11222232 3455556667
Q ss_pred HHHHHhhh-cHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceE
Q 013204 324 ALKIYKER-NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV 402 (447)
Q Consensus 324 ~l~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~ 402 (447)
+++.+... +..++++++++++++.|+++ +..+ .+.+.++.+.+.... ....+.+.|.++||++
T Consensus 294 al~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v----~~~~~i~~l~~~~~~-----------~~~~~~~~L~~~GI~~ 357 (407)
T PRK07179 294 TLEVIESADDRRARLHANARFLREGLSEL-GYNI----RSESQIIALETGSER-----------NTEVLRDALEERNVFG 357 (407)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCC----CCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCceE
Confidence 78776543 46788999999999999886 3322 244667666654211 1345778899999974
Q ss_pred E----ee----CCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 403 R----VS----GDNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 403 ~----~~----g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
. +. .+.+||+++..+|++||++++++|++++++.
T Consensus 358 ~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 358 AVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred eeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 3 21 2579999999999999999999999887763
No 95
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=100.00 E-value=2.2e-30 Score=252.44 Aligned_cols=341 Identities=16% Similarity=0.217 Sum_probs=232.4
Q ss_pred EecCCccccccCCC-CCHHHHHHHHHHHhcCCcc---cccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHH
Q 013204 36 LDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 111 (447)
Q Consensus 36 lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~A 111 (447)
|||+++ ++||. +||++++++.+++++++.. ++.+.+......+|++++++++ +.+..++++||+.|+..+
T Consensus 1 ~~f~s~---dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~---g~e~al~~~sG~~a~~~~ 74 (392)
T PLN03227 1 LNFATH---DFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFL---GTESAILYSDGASTTSST 74 (392)
T ss_pred CCCcCc---CccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHh---CCCcEEEecCcHHHHHHH
Confidence 467665 55664 7999999999999874332 2233456678899999999997 345788899999999988
Q ss_pred HHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHH
Q 013204 112 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191 (447)
Q Consensus 112 l~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (447)
+.... ...+.|++-++.| ++....+...+... ..++. .+ .+
T Consensus 75 i~~l~--------~~GD~Vl~~~~~h-~s~~~~~~l~~~~~------------~~~~~----------~d--------~~ 115 (392)
T PLN03227 75 VAAFA--------KRGDLLVVDRGVN-EALLVGVSLSRANV------------RWFRH----------ND--------MK 115 (392)
T ss_pred HHHhC--------CCCCEEEEecccc-HHHHHHHHHcCCeE------------EEeCC----------CC--------HH
Confidence 87653 3346666655555 54433322222110 00111 01 13
Q ss_pred HHHHHHHhh----------CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc--cccc
Q 013204 192 NLEDLILKE----------GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFGC 259 (447)
Q Consensus 192 ~le~~l~~~----------~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~--~~~~ 259 (447)
++++.+... ...++..|++|++++++|.++| +++|+++|++||+++|+||+|+ +|..|. .++.
T Consensus 116 ~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~-~g~~g~~G~g~~ 190 (392)
T PLN03227 116 DLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP----LKELVALKEEFHYRLILDESFS-FGTLGKSGRGSL 190 (392)
T ss_pred HHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC----HHHHHHHHHHcCCEEEEECccc-ccccCCCCCcHH
Confidence 334333221 1135679999999999998888 9999999999999999999997 555443 2677
Q ss_pred ccCCCCC----CeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCc--HHHHHHHHHHHHH-Hhhhc
Q 013204 260 DKYSIKP----DLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH--PVSCAVAIEALKI-YKERN 332 (447)
Q Consensus 260 ~~~~~~~----d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~--~~~~~aa~a~l~~-~~~~~ 332 (447)
+++|+.| |++++|++-+.| +..|++++++++++.+.. ..+..+|+++ |+.+++++++++. ++.++
T Consensus 191 ~~~g~~p~~~~Div~~slsk~~g-~~gg~v~~~~~~~~~~~~-------~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~ 262 (392)
T PLN03227 191 EHAGLKPMVHAEIVTFSLENAFG-SVGGMTVGSEEVVDHQRL-------SGSGYCFSASAPPFLAKADATATAGELAGPQ 262 (392)
T ss_pred HHcCCCCCCCceEEEeechhhhh-ccCcEEecCHHHHHHHHH-------hCcCccccCCCCHHHHHHHHHHHHHHhcCHH
Confidence 8899988 999876332222 455778889998877642 2344566654 7777777777754 45567
Q ss_pred HHHHHHHHHHHHHHhHhhccCCCceeeEee--------eeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEe
Q 013204 333 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRG--------TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV 404 (447)
Q Consensus 333 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~--------~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~ 404 (447)
+.++++++++++++.|++. +++.+.++++ .|.++++.+.+..... .. ........+.+.|+++|+++.+
T Consensus 263 ~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~-~~-~~~~~~~~~~~~~~~~Gi~~~~ 339 (392)
T PLN03227 263 LLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVITSDPISPIIYLRLSDQEATR-RT-DETLILDQIAHHSLSEGVAVVS 339 (392)
T ss_pred HHHHHHHHHHHHHHHHHhc-CCccccccccccccCCCCCCCEEEEEeCCHHHhh-hh-hhhhHHHHHHHHHHHCCCEEEe
Confidence 8899999999999999863 4555555555 3557888875432111 00 0111235688999999999864
Q ss_pred eC------------CEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 405 SG------------DNIMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 405 ~g------------~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
.+ ..+|++++..+|+|||++++++|+++++++.
T Consensus 340 ~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 340 TGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred cccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 22 3579999999999999999999999998764
No 96
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.98 E-value=2.3e-29 Score=246.83 Aligned_cols=347 Identities=16% Similarity=0.225 Sum_probs=236.5
Q ss_pred CCeEEEEecCcEEEeCCCCEEEecCCccccccCCC-CCHHHHHHHHHHHhcCCc---ccccCcCCChHHHHHHHHHHHhc
Q 013204 15 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEMF 90 (447)
Q Consensus 15 ~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~ 90 (447)
+|.++.+++|++|+ .||++|+||+++ .++|| .+|.+.+++.+++.+... .+....+..+...++++++.+.+
T Consensus 16 ~~~~~~~~~g~~~~-~~g~~~id~~~~---~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~ 91 (385)
T TIGR01825 16 SIRVLESAQGPRVR-VNGKEVINLSSN---NYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFK 91 (385)
T ss_pred cccccccCCCceEE-ECCceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHh
Confidence 58889999999999 999999999875 56788 899999999999875422 12233456778889999998876
Q ss_pred CcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCC
Q 013204 91 TASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP 170 (447)
Q Consensus 91 ~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (447)
. .+..++.++|++++..+++.+. .+++.|++. ..+|+.....+...+..... ++..
T Consensus 92 g---~~~~i~~~sG~~a~~~a~~~~~--------~~gd~vi~~-~~~~~~~~~~~~~~g~~~~~------------~~~~ 147 (385)
T TIGR01825 92 K---TEAALVFQSGFNTNQGVLSALL--------RKGDIVLSD-ELNHASIIDGLRLTKATKKI------------YKHA 147 (385)
T ss_pred C---CCcEEEECcHHHHHHHHHHHhC--------CCCCEEEEE-ccccHHHHHHHHhcCCceEE------------eCCC
Confidence 3 2355677788999998888653 233555554 55566654443333321100 0000
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcC-
Q 013204 171 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA- 249 (447)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g- 249 (447)
+.+++++.+......++++|+++++++.+|.+.+ +++|.++|++||+++|+||+|+.
T Consensus 148 ------------------d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~ 205 (385)
T TIGR01825 148 ------------------DMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSG 205 (385)
T ss_pred ------------------CHHHHHHHHHhhccCCCeEEEEecCCcCCCCccC----HHHHHHHHHHhCCEEEEECccccc
Confidence 0256777665433345778899999988888776 89999999999999999999963
Q ss_pred -CCccccccccccCCCCCC----eeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHH
Q 013204 250 -FGRLGTMFGCDKYSIKPD----LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA 324 (447)
Q Consensus 250 -~g~~g~~~~~~~~~~~~d----~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~ 324 (447)
+++.|. +....+++.+| +.+|||++++ +.|++++++++++.+..... .+ ..+...++..++++.++
T Consensus 206 ~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~---~gG~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~a~~~a 276 (385)
T TIGR01825 206 VMGEAGR-GTVHHFGLEDKVDIQVGTLSKAIGV---VGGYAAGHKELIEYLKNRAR---PF--LFSTAQPPAVVAALAAA 276 (385)
T ss_pred CcCCCCC-ccHhhcCCCcCCcEEEEeccHHhhc---CCCEEecCHHHHHHHHHhCc---cc--cccCCCCHHHHHHHHHH
Confidence 333332 22333444444 3578999964 34788889998888763210 11 11223467778888888
Q ss_pred HHHHhh-hcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEE
Q 013204 325 LKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR 403 (447)
Q Consensus 325 l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~ 403 (447)
++.+.+ .+..+++.++++++++.|+++ +.++. ...+.++.+.+.... ....+.+.|+++||++.
T Consensus 277 l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~gi~v~ 341 (385)
T TIGR01825 277 VDELQRSPELMERLWDNTRFFKAGLGKL-GYDTG---GSETPITPVVIGDEK-----------AAQEFSRRLFDEGIFAQ 341 (385)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC---CCCCCEEEEEECCHH-----------HHHHHHHHHHHCCcEEc
Confidence 886643 456778888889999988876 32222 122334444432110 13458889999999885
Q ss_pred ee-------C-CEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 404 VS-------G-DNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 404 ~~-------g-~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
+. + ..+|++|++.+++++|++++++|++++++
T Consensus 342 ~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 342 SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 21 2 56999999999999999999999998854
No 97
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=9.9e-29 Score=242.90 Aligned_cols=351 Identities=18% Similarity=0.236 Sum_probs=240.4
Q ss_pred CCCeEEEEecCcEEEeCCCCEEEecCCccccccCCCC-CHHHHHHHHHHHhcCCccc---ccCcCCChHHHHHHHHHHHh
Q 013204 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGS-EPRLVAAATAQLNTLPFYH---SFWNRTTKPSLDLAKELLEM 89 (447)
Q Consensus 14 ~~~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~ 89 (447)
+.|.++.++.|..+++.||++++||+++ .+||++ +|++++++.+++.+....+ ....+..+...++++.+++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~g~~~i~~~~~---~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~ 95 (393)
T TIGR01822 19 KSERIITSPQGADIRVADGREVLNFCAN---NYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAF 95 (393)
T ss_pred CcccccccCCCceEEecCCceEEEeeCC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHH
Confidence 3567788999999998899999999988 677775 9999999999997632221 12224466778999999998
Q ss_pred cCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCC
Q 013204 90 FTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC 169 (447)
Q Consensus 90 ~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (447)
+. .+++++++||++|+..++..+. .+++.|++.++.|+....+... .+..... .+
T Consensus 96 ~g---~~~~ii~~~~~~a~~~~~~~l~--------~~gd~vi~~~~~~~s~~~~~~~-~~~~~~~------------~~- 150 (393)
T TIGR01822 96 LG---TEDTILYASCFDANGGLFETLL--------GAEDAIISDALNHASIIDGVRL-CKAKRYR------------YA- 150 (393)
T ss_pred hC---CCcEEEECchHHHHHHHHHHhC--------CCCCEEEEeccccHHHHHHHHh-cCCceEE------------eC-
Confidence 73 3567888999999998776553 2346777766666554433322 2211100 00
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHHHHHhhCC--CcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhh
Q 013204 170 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGP--ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI 247 (447)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~--~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~ 247 (447)
+.+++++++.+..... .++++|+++++++++|.+.+ +++|.++|++||+++|+||+|
T Consensus 151 -----------------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~----l~~i~~la~~~~~~li~De~~ 209 (393)
T TIGR01822 151 -----------------NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP----LDEICDLADKYDALVMVDECH 209 (393)
T ss_pred -----------------CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC----HHHHHHHHHHcCCEEEEECCc
Confidence 0113777777764211 25778999999999898876 999999999999999999999
Q ss_pred cCCCccccc--cccccCCC--CCCee--eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHH
Q 013204 248 CAFGRLGTM--FGCDKYSI--KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVA 321 (447)
Q Consensus 248 ~g~g~~g~~--~~~~~~~~--~~d~v--~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa 321 (447)
. +|..|.. ...+..++ .+|++ ++||+++| +++|++++++++++.+.... ..+. .+.+.++..++++
T Consensus 210 ~-~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g--~r~G~~~~~~~~~~~l~~~~---~~~~--~~~~~~~~~~~a~ 281 (393)
T TIGR01822 210 A-TGFLGPTGRGSHELCGVMGRVDIITGTLGKALGG--ASGGFTTARKEVVELLRQRS---RPYL--FSNSLPPAVVGAS 281 (393)
T ss_pred c-ccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhC--CCcEEEEeCHHHHHHHHHhC---ccce--ecCCCCHHHHHHH
Confidence 5 4444321 12223333 35776 67899975 68899999999988876421 1111 1223355666677
Q ss_pred HHHHHHHhh-hcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCc
Q 013204 322 IEALKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM 400 (447)
Q Consensus 322 ~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 400 (447)
.++++.++. ++..++++++.+++++.|+++ +..+. .+.+.++.+.+.+.. ....+.+.|+++||
T Consensus 282 ~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~~~~~~~i~~~~~~-----------~~~~l~~~L~~~gI 346 (393)
T TIGR01822 282 IKVLEMLEASNELRDRLWANTRYFRERMEAA-GFDIK---PADHPIIPVMLYDAV-----------LAQRFARRLLEEGI 346 (393)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC---CCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCe
Confidence 788876643 456788889999999988775 22221 122334444433211 24568888999999
Q ss_pred eEEee-------C-CEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 401 LVRVS-------G-DNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 401 ~~~~~-------g-~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
.+... + ..+|+++++.+|+++|++++++|+++++++
T Consensus 347 ~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 347 YVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred eEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 88732 2 359999999999999999999999887653
No 98
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.97 E-value=8.1e-29 Score=243.04 Aligned_cols=342 Identities=21% Similarity=0.276 Sum_probs=237.8
Q ss_pred eEEEEecCcEEEeCCCCEEEecCCccccccCCC-CCHHHHHHHHHHHhcCCcc---cccCcCCChHHHHHHHHHHHhcCc
Q 013204 17 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 17 ~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
.++.+++|.++++ +|++|||+.++ .++|+ .+|++++++.+++++.... +....++.+...++++++++++.
T Consensus 24 ~~~~~~~g~~~~~-~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~- 98 (385)
T PRK05958 24 RPREGGAGRWLVV-DGRRMLNFASN---DYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG- 98 (385)
T ss_pred cccccCCCceeEe-CCceEEEeeCC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-
Confidence 4588999999997 99999999887 35787 7899999999999764321 11223456778899999999873
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCc
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
.++.+++++|++++..+++... .+++.|++. ..+|+.........+.... .++..
T Consensus 99 --~~~~i~~~~g~~~~~~~l~~~~--------~~gd~V~~~-~~~~~~~~~~~~~~g~~~~------------~~~~~-- 153 (385)
T PRK05958 99 --AERALLFSSGYAANLAVLTALA--------GKGDLIVSD-KLNHASLIDGARLSRARVR------------RYPHN-- 153 (385)
T ss_pred --CCcEEEECcHHHHHHHHHHHhC--------CCCCEEEEe-CccCHHHHHHHHhcCCceE------------EeCCC--
Confidence 3567778889999998877542 223556554 5566765555444332211 11111
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc-C-C
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A-F 250 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~-g-~ 250 (447)
+++++++.+.... +++++++++++++.+|...+ +++|+++|++||+++|+||+|+ | +
T Consensus 154 ----------------d~~~l~~~i~~~~-~~~~lvi~~~~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~ 212 (385)
T PRK05958 154 ----------------DVDALEALLAKWR-AGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVL 212 (385)
T ss_pred ----------------CHHHHHHHHHhcc-CCCeEEEEEecccCCCCcCC----HHHHHHHHHHhCCEEEEECccccccc
Confidence 1367777776422 24678899999988887766 9999999999999999999996 2 2
Q ss_pred Ccccccccccc--CCCCCC---eeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHH
Q 013204 251 GRLGTMFGCDK--YSIKPD---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEAL 325 (447)
Q Consensus 251 g~~g~~~~~~~--~~~~~d---~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l 325 (447)
++.|..+ ... ....+| +.++||+++. +.|++++++++++.+.... . ....+...++++++++.+++
T Consensus 213 ~~~g~~~-~~~~~~~~~~~~i~~~s~sK~~~~---~Gg~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~aa~~aal 283 (385)
T PRK05958 213 GPQGRGL-AAEAGLAGEPDVILVGTLGKALGS---SGAAVLGSETLIDYLINRA---R--PFIFTTALPPAQAAAARAAL 283 (385)
T ss_pred CCCCCch-HHhhCCCCCCceEEEEechhhccc---CCcEEEcCHHHHHHHHHhC---c--cceecCCCCHHHHHHHHHHH
Confidence 3333322 121 222456 4478999964 2378888998888775321 1 11234456788888888889
Q ss_pred HHHhh-hcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEe
Q 013204 326 KIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV 404 (447)
Q Consensus 326 ~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~ 404 (447)
+.++. +++.+++.++++++.+.|+++ ...+ +.+.|.++.+.+.... ....+.+.|+++||.+.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~---~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gI~v~~ 348 (385)
T PRK05958 284 RILRREPERRERLAALIARLRAGLRAL-GFQL---MDSQSAIQPLIVGDNE-----------RALALAAALQEQGFWVGA 348 (385)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCc---CCCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCceEec
Confidence 87765 367788888999999999876 2222 2345667666654211 244688899999999975
Q ss_pred e-------C-CEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 405 S-------G-DNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 405 ~-------g-~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
. + +.+|++|+..++++++++++++|++++
T Consensus 349 ~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 349 IRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred ccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 2 1 469999999999999999999998753
No 99
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.97 E-value=2.2e-28 Score=213.34 Aligned_cols=342 Identities=19% Similarity=0.237 Sum_probs=243.5
Q ss_pred eEEEEecCcEEEeCCC--CEEEecCCccccccCCC-CCHHHHHHHHHHHhcCCcc---cccCcCCChHHHHHHHHHHHhc
Q 013204 17 LVIEKSEGSYVYDVNG--KKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMF 90 (447)
Q Consensus 17 ~~~~~~~g~~~~d~dg--~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~ 90 (447)
-++.+.+|..+. ++| +.+|.|+++ ++||. +||+|.++-.+++++++.+ .++..++.+.+..|+.+++++.
T Consensus 50 rVi~s~q~p~i~-v~G~~k~ilnFcaN---nYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh 125 (417)
T KOG1359|consen 50 RVITSRQGPTIQ-VKGSDKKILNFCAN---NYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFH 125 (417)
T ss_pred eEEeecccceEE-Eeccccceeeeccc---ccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHh
Confidence 578899999886 666 689999988 78885 8999999999999886543 3355678889999999999885
Q ss_pred CcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcC-CCccchhhhhcccCCccccCCCCCCCCcceecCC
Q 013204 91 TASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK-SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC 169 (447)
Q Consensus 91 ~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~-~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (447)
+.++.++++++..||..++..+. + .+..+|+. --|.+....+.+..
T Consensus 126 ---~rED~ilypscfdANag~feail--------~--pedAvfSDeLNhASIIdGirLck-------------------- 172 (417)
T KOG1359|consen 126 ---GREDTILYPSCFDANAGAFEAIL--------T--PEDAVFSDELNHASIIDGIRLCK-------------------- 172 (417)
T ss_pred ---CCCceEEeccccccchHHHHHhc--------C--hhhhhhccccccchhhhhhHHHh--------------------
Confidence 67789999999999999998774 2 23334433 34555443332221
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc-
Q 013204 170 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC- 248 (447)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~- 248 (447)
-+.+.+.-+++..+....+-+..+|..+.+.+|.|.+.| |++|.+++++||++|++||.|.
T Consensus 173 --------------ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP----l~ei~~La~kYgaLlfiDecHaT 234 (417)
T KOG1359|consen 173 --------------RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP----LEEISQLAKKYGALLFIDECHAT 234 (417)
T ss_pred --------------hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCccc----HHHHHHHHHhcCcEEEEeecccc
Confidence 123334566776665433347889999999999999999 9999999999999999999996
Q ss_pred CC-CccccccccccCCC--CCCee--eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHH
Q 013204 249 AF-GRLGTMFGCDKYSI--KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIE 323 (447)
Q Consensus 249 g~-g~~g~~~~~~~~~~--~~d~v--~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a 323 (447)
|| |.+| .+.-+.+++ .+|++ |+||++||. --|++.+++.++..++.. .+++..+.+..+..++++ .+
T Consensus 235 gf~G~tG-rGt~E~~~vm~~vdiinsTLgKAlGga--~GGyttgp~~li~llrqr---~RpylFSnslppavV~~a--~k 306 (417)
T KOG1359|consen 235 GFFGETG-RGTAEEFGVMGDVDIINSTLGKALGGA--SGGYTTGPKPLISLLRQR---SRPYLFSNSLPPAVVGMA--AK 306 (417)
T ss_pred eeecCCC-CChHHHhCCCCcceehhhhhhhhhcCC--CCCCccCChhHHHHHHhc---CCceeecCCCChhhhhhh--HH
Confidence 33 4444 234466775 46766 789999872 447899999999988753 345554444443334443 45
Q ss_pred HHHHH-hhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceE
Q 013204 324 ALKIY-KERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV 402 (447)
Q Consensus 324 ~l~~~-~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~ 402 (447)
+++.+ ........++.+.+++++..+.. ++.+.+.. ..+..+.+. +.+++..+.+.|+++|+++
T Consensus 307 a~dllm~s~~~i~~~~a~~qrfr~~me~a-GftIsg~~---hPI~pv~lG-----------da~lA~~~ad~lLk~Gi~V 371 (417)
T KOG1359|consen 307 AYDLLMVSSKEIQSRQANTQRFREFMEAA-GFTISGAS---HPICPVMLG-----------DARLASKMADELLKRGIYV 371 (417)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHhc-CceecCCC---CCccceecc-----------cHHHHHHHHHHHHhcCceE
Confidence 56644 34567788899999999988764 11111000 011122222 2236777899999999998
Q ss_pred Eee-------C-CEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 403 RVS-------G-DNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 403 ~~~-------g-~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
... | ..||+..+..||+||||++++++.++.+.+
T Consensus 372 igfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 372 IGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred EeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhh
Confidence 743 3 459999999999999999999999887643
No 100
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=1.6e-27 Score=234.78 Aligned_cols=348 Identities=20% Similarity=0.254 Sum_probs=234.7
Q ss_pred CeEEEEecCcEEEeCCCCEEEecCCccccccCCC-CCHHHHHHHHHHHhcCCccc---ccCcCCChHHHHHHHHHHHhcC
Q 013204 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYH---SFWNRTTKPSLDLAKELLEMFT 91 (447)
Q Consensus 16 ~~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~ 91 (447)
+..+++++|.+++|.||+.|+||+++ .++|+ .+|++.+++.+++.+....+ ....+..+...++++++++.+.
T Consensus 25 ~~~~~~~~~~~~~~~~g~~~i~l~~~---~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g 101 (397)
T PRK06939 25 ERVITSPQGADITVADGKEVINFCAN---NYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLG 101 (397)
T ss_pred cccccCCCCceEEecCCCeEEEeecc---CccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhC
Confidence 45678999999999999999999876 55777 68999999999987632211 1223456777889999998873
Q ss_pred cCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCC
Q 013204 92 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 171 (447)
Q Consensus 92 ~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (447)
.++.+++++|++++..+++.+. .+++.|++.++.|.+............. .++..
T Consensus 102 ---~~~~i~~tsG~~a~~~~~~~l~--------~~gd~vi~~~~~~~~~~~~~~~~~~~~~-------------~~~~~- 156 (397)
T PRK06939 102 ---TEDAILYSSCFDANGGLFETLL--------GKEDAIISDALNHASIIDGVRLCKAKRY-------------RYANN- 156 (397)
T ss_pred ---CCcEEEEcChHHHHHHHHHHhC--------CCCCEEEEEhhhhHHHHHHHHhcCCceE-------------EeCCC-
Confidence 2244556667999999887653 3347788888777665443322221110 01110
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHhhC--CCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc-
Q 013204 172 YWRYAHPGETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC- 248 (447)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~- 248 (447)
+++++++.+.... ..++++|+++++++..|...+ +++|.++|++||+++|+||+|+
T Consensus 157 -----------------d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~ 215 (397)
T PRK06939 157 -----------------DMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP----LPEICDLADKYDALVMVDDSHAV 215 (397)
T ss_pred -----------------CHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC----HHHHHHHHHHhCCEEEEECcccc
Confidence 1366777665321 125678888889888887554 9999999999999999999995
Q ss_pred CC-CccccccccccCCC--CCCee--eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHH
Q 013204 249 AF-GRLGTMFGCDKYSI--KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIE 323 (447)
Q Consensus 249 g~-g~~g~~~~~~~~~~--~~d~v--~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a 323 (447)
|+ +..|. ......++ .+|++ ++||+++| +++|++++++++++.+.... ..+. .+.+.++..++++.+
T Consensus 216 g~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~g--~r~G~v~~~~~~~~~l~~~~---~~~~--~~~~~~~~~~~a~~~ 287 (397)
T PRK06939 216 GFVGENGR-GTVEHFGVMDRVDIITGTLGKALGG--ASGGYTAGRKEVIDWLRQRS---RPYL--FSNSLAPAIVAASIK 287 (397)
T ss_pred cCcCCCCC-CHHHHcCCCCCCcEEEEECHHHhCc--cCceEEEeCHHHHHHHHHhC---cccc--ccCCCCHHHHHHHHH
Confidence 32 22222 12233344 35677 68999965 58899999999988886321 0111 122335555677777
Q ss_pred HHHHHhh-hcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceE
Q 013204 324 ALKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV 402 (447)
Q Consensus 324 ~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~ 402 (447)
+++.+.. ++..++++++.+++++.|+++ +... ..+.+.++.+.+.... ....+.+.|+++||.+
T Consensus 288 al~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~---~~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~gI~v 352 (397)
T PRK06939 288 VLELLEESDELRDRLWENARYFREGMTAA-GFTL---GPGEHPIIPVMLGDAK-----------LAQEFADRLLEEGVYV 352 (397)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCc---CCCCCCEEEEEECCHH-----------HHHHHHHHHHHCCceE
Confidence 7877653 356778888888888888876 2221 1233444443332110 2456888999999988
Q ss_pred Eee--------CCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 403 RVS--------GDNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 403 ~~~--------g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
.+. ...+|+++++.+++++|++++++|++++++
T Consensus 353 ~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 353 IGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred eeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 742 146999998899999999999999988765
No 101
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=8.1e-28 Score=237.26 Aligned_cols=336 Identities=18% Similarity=0.247 Sum_probs=228.6
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcc---cccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA 107 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA 107 (447)
||+++++|.++ ..++|| .||++++++.+++++.... ++...+..+...+|+++++++++ .++.++++||++|
T Consensus 44 ~~~~~~~~~sn-~yl~l~-~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g---~~~~i~~~sG~~a 118 (410)
T PRK13392 44 GPRRVTIWCSN-DYLGMG-QHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG---KESALLFTSGYVS 118 (410)
T ss_pred CCceEEEEECC-CccCCC-CCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC---CCCEEEECcHHHH
Confidence 57899999876 334555 6999999999999875432 11223345578899999999973 3467788889999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
|+.+++.+... .+ ..+|+.+..+|++....+...+..... .+. .
T Consensus 119 ~~~~i~~l~~~-----~~--g~~vi~~~~~h~s~~~~~~~~g~~~~~------------~~~----------~------- 162 (410)
T PRK13392 119 NDAALSTLGKL-----LP--GCVILSDALNHASMIEGIRRSGAEKQV------------FRH----------N------- 162 (410)
T ss_pred HHHHHHHHhcC-----CC--CCEEEEehhhhHHHHHHHHHcCCeEEE------------EeC----------C-------
Confidence 99999854210 12 235566777898876555444432110 000 0
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc-CC-CccccccccccCCC-
Q 013204 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AF-GRLGTMFGCDKYSI- 264 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~-g~-g~~g~~~~~~~~~~- 264 (447)
+.+++++.+.....+++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+ |+ |..|... .+..++
T Consensus 163 -d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~ 236 (410)
T PRK13392 163 -DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARGGGI-AERDGLM 236 (410)
T ss_pred -CHHHHHHHHHhccCCCCEEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCCCch-hhhccCC
Confidence 1245566665433346789999999999998887 9999999999999999999998 43 4444332 233443
Q ss_pred -CCCee--eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh-cHHHHHHHH
Q 013204 265 -KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER-NIVEQVNKI 340 (447)
Q Consensus 265 -~~d~v--~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~-~~~~~~~~~ 340 (447)
.+|++ ++||+++.. .|++++++++++.+..... . ...+.+.+|++++++.++|+.++.. ...++++++
T Consensus 237 ~~~div~~tlsK~~g~~---GG~~~~~~~~~~~l~~~~~---~--~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~ 308 (410)
T PRK13392 237 DRIDMIQGTLAKAFGCL---GGYIAASADLIDFVRSFAP---G--FIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDR 308 (410)
T ss_pred CCCcEEEEEChHhhhcc---cchhhcCHHHHHHHHHhCc---c--hhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 36776 799998752 2788889999887763211 1 1124456778888888999876543 244667778
Q ss_pred HHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEee-------C-CEEEE
Q 013204 341 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------G-DNIMM 411 (447)
Q Consensus 341 ~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------g-~~iR~ 411 (447)
.+++++.|+++ +..+. .+.+.++.+.+..+. ....+.++|+ ++||++.+. + ..+|+
T Consensus 309 ~~~l~~~L~~~-g~~~~---~~~~~~~~i~~~~~~-----------~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRi 373 (410)
T PRK13392 309 VAALKAKLNAN-GIPVM---PSPSHIVPVMVGDPT-----------LCKAISDRLMSEHGIYIQPINYPTVPRGTERLRI 373 (410)
T ss_pred HHHHHHHHHHc-CCCCC---CCCCCEEEEEeCCHH-----------HHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEE
Confidence 88888888875 32221 234555544443211 1345788886 679999864 2 46999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 412 SPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 412 ~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
++++.+|++|+++++++|+++++++
T Consensus 374 s~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 374 TPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred EECCCCCHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999987653
No 102
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.96 E-value=3.3e-27 Score=229.48 Aligned_cols=326 Identities=19% Similarity=0.188 Sum_probs=219.6
Q ss_pred CEEEecCCccccccCCC-CCHHHHHHHHHHHhcCC-------c---ccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEe
Q 013204 33 KKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLP-------F---YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFT 101 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~-------~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~ 101 (447)
.+++||+|+ ++||+ .+|++.+++.+++.+.. . +++.+.+..+...++++++++++. .+.++++
T Consensus 4 ~~~~~~~s~---~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~---~~~~l~~ 77 (370)
T PRK05937 4 SLSIDFVTN---DFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG---APEAFIV 77 (370)
T ss_pred CceEEeECC---CccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC---CCeEEEE
Confidence 358888887 77886 68999999999887641 1 122334467889999999999973 3567889
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCC
Q 013204 102 NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 181 (447)
Q Consensus 102 ~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (447)
+||+.||...+... .++..+|+.+..+|++...++..... .. +++
T Consensus 78 ~sG~~a~~~~~~~~---------~~~~d~ii~d~~~H~sv~~~~~~~~~--~~------------~~~------------ 122 (370)
T PRK05937 78 PSGYMANLGLCAHL---------SSVTDYVLWDEQVHISVVYSLSVISG--WH------------QSF------------ 122 (370)
T ss_pred CChHHHHHHHHHHh---------CCCCCEEEEEhhhhHHHHHHHHHcCC--ce------------EEe------------
Confidence 99999996544332 23457888899999998776653211 00 001
Q ss_pred hhHHHHHHHHHHHHHHHhhCC--CcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc-C-CCcccccc
Q 013204 182 EEEYSTRLANNLEDLILKEGP--ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A-FGRLGTMF 257 (447)
Q Consensus 182 ~~~~~~~~~~~le~~l~~~~~--~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~-g-~g~~g~~~ 257 (447)
.++++++|++++..... ++..+|+++++++++|.+.| +++|.++|++||+++++||+|+ | +|.+|..+
T Consensus 123 ----~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~ 194 (370)
T PRK05937 123 ----RHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGF 194 (370)
T ss_pred ----cCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch
Confidence 11124788888864321 34567889999999999988 9999999999999999999998 3 44444332
Q ss_pred ccccCC---CCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh--c
Q 013204 258 GCDKYS---IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER--N 332 (447)
Q Consensus 258 ~~~~~~---~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~--~ 332 (447)
.. .++ ..+|+.++||+++.. + +.+++.+++.+.+.... .++. .+.+.++.+++++.++++.+.+. .
T Consensus 195 ~~-~~~~~~~~~~~~tlsK~~g~~--G-~~vl~~~~~~~~~~~~~---~~~~--~s~~~~~~~~~a~~aal~~l~~~~~~ 265 (370)
T PRK05937 195 CH-SLGYENFYAVLVTYSKALGSM--G-AALLSSSEVKQDLMLNS---PPLR--YSTGLPPHLLISIQVAYDFLSQEGEL 265 (370)
T ss_pred HH-hhCCCCCcEEEEechhhhhcC--c-eEEEcCHHHHHHHHHhC---CCCe--ecCCCCHHHHHHHHHHHHHHHhCcHH
Confidence 21 222 235678999998752 2 34556676655554211 1111 33446777777777888887543 2
Q ss_pred HHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee----CCE
Q 013204 333 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----GDN 408 (447)
Q Consensus 333 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----g~~ 408 (447)
..++++++.+++++.|+... + +....+.+... ....+.+.|.++||++... .+.
T Consensus 266 ~~~~l~~l~~~l~~~l~~~~--~--------~~~~~i~~~~~------------~~~~~~~~L~~~gi~v~~~~~~~~~~ 323 (370)
T PRK05937 266 ARKQLFRLKEYFAQKFSSAA--P--------GCVQPIFLPGI------------SEQELYSKLVETGIRVGVVCFPTGPF 323 (370)
T ss_pred HHHHHHHHHHHHHHhcCCCC--C--------CCEEEEEeCCh------------hHHHHHHHHHHCCeeEEeeCCCCCCE
Confidence 45666667777766664321 1 11112333321 1345778889999988743 467
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 409 IMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 409 iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
+|++++..+|++||+++++.|++.++++.+
T Consensus 324 iRis~~~~~t~edid~l~~~L~~~~~~~~~ 353 (370)
T PRK05937 324 LRVNLHAFNTEDEVDILVSVLATYLEKYQK 353 (370)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999987654
No 103
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.96 E-value=1.8e-26 Score=224.26 Aligned_cols=338 Identities=18% Similarity=0.250 Sum_probs=227.5
Q ss_pred EEEecCcEEEeCCCCEEEecCCccccccCCC-CCHHHHHHHHHHHhcCCccc---ccCcCCChHHHHHHHHHHHhcCcCC
Q 013204 19 IEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYH---SFWNRTTKPSLDLAKELLEMFTASK 94 (447)
Q Consensus 19 ~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~ 94 (447)
..++.|.++. .||++||||.++ ++||+ .||++++++.+++......+ ....+..+...++++.+++++.
T Consensus 3 ~~~~~~~~~~-~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~--- 75 (360)
T TIGR00858 3 LDRGPGPEVV-RDGRRLLNFSSN---DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG--- 75 (360)
T ss_pred cccCCCCeEE-ECCceEEecccC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---
Confidence 4678899998 899999999987 68995 78999999999987643221 1112345677889999999873
Q ss_pred CCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCccc
Q 013204 95 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 174 (447)
Q Consensus 95 ~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (447)
.+..+++++|++++..+++.+. .+++.|++.++.| ..........+... ..++..
T Consensus 76 ~~~~i~~~~G~~~~~~~l~~~~--------~~gd~v~~~~~~~-~~~~~~~~~~g~~~------------~~~~~~---- 130 (360)
T TIGR00858 76 TEAALLFSSGYLANVGVISALV--------GKGDLILSDALNH-ASLIDGCRLSGARV------------RRYRHN---- 130 (360)
T ss_pred CCCEEEECchHHHHHHHHHHhC--------CCCCEEEEEcccc-HHHHHHHHhcCCce------------EEecCC----
Confidence 2345666778999988777553 2345676665554 44333333222211 011111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccc
Q 013204 175 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 254 (447)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g 254 (447)
+++++++.+......++++|+++++++..|.+.+ +++|.++|++||+++|+||+|+ +|..+
T Consensus 131 --------------d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~-~~~~~ 191 (360)
T TIGR00858 131 --------------DVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDDAHG-TGVLG 191 (360)
T ss_pred --------------CHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcC----HHHHHHHHHHcCcEEEEECccc-ccCcC
Confidence 1367777776432134678889999888887766 9999999999999999999997 44433
Q ss_pred cc--cccccCCCCCC-----eeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHH
Q 013204 255 TM--FGCDKYSIKPD-----LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI 327 (447)
Q Consensus 255 ~~--~~~~~~~~~~d-----~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~ 327 (447)
.. .....+++.++ +.++||++++ +.|++++++++++.+..... ....+.+.++..++++.++++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~---~gG~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~~~al~~ 263 (360)
T TIGR00858 192 EDGRGTLEHFGLKPEPVDIQVGTLSKALGS---YGAYVAGSQALIDYLINRAR-----TLIFSTALPPAVAAAALAALEL 263 (360)
T ss_pred CCCCchHHhcCCCccCCcEEEEechhhhhc---cCcEEEcCHHHHHHHHHhCc-----cceecCCCCHHHHHHHHHHHHH
Confidence 21 12233444433 4478999875 23789999998887753210 1112334567777778888876
Q ss_pred Hhh-hcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-
Q 013204 328 YKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS- 405 (447)
Q Consensus 328 ~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~- 405 (447)
++. ++..++++++.+++.+.|+++ +... ....+.++.+.+.... ....+.++|+++||++.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~---~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gI~v~~~~ 328 (360)
T TIGR00858 264 IQEEPWRREKLLALIARLRAGLEAL-GFTL---MPSCTPIVPVIIGDNA-----------SALALAEELQQQGIFVGAIR 328 (360)
T ss_pred HhhCHHHHHHHHHHHHHHHHHHHHc-CCcc---CCCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCeeEeeeC
Confidence 654 356788888999999999876 2221 1234556666654211 1446889999999999742
Q ss_pred -------CCEEEEecCCCCCHHHHHHHHHHHH
Q 013204 406 -------GDNIMMSPPFIMSPEEVDELISKYG 430 (447)
Q Consensus 406 -------g~~iR~~~~~~~t~e~i~~~~~~l~ 430 (447)
++.+|++++..++++++++++++|+
T Consensus 329 ~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 329 PPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 2479999999999999999999874
No 104
>PLN02483 serine palmitoyltransferase
Probab=99.96 E-value=1.7e-25 Score=223.29 Aligned_cols=333 Identities=17% Similarity=0.180 Sum_probs=220.3
Q ss_pred CCCCEEEecCCccccccCCCC--CHHHHHHHHHHHhcCCcc---cccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCCh
Q 013204 30 VNGKKYLDSLAGLWCTALGGS--EPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSG 104 (447)
Q Consensus 30 ~dg~~~lD~~~~~~~~~lG~~--~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sG 104 (447)
..++++++|+|+ ++||.+ ++.+.+++.+++.+.... ++...++.+...++++++++++. .+..+++++|
T Consensus 97 ~~~~~~~n~~s~---~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g---~~~ai~~~~G 170 (489)
T PLN02483 97 TKTRRCLNLGSY---NYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG---KPAAIVFGMG 170 (489)
T ss_pred CCCceEEEeecC---CccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC---CCcEEEECCH
Confidence 356899999877 667753 677888888888775432 22234578899999999999973 3445666779
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhH
Q 013204 105 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 184 (447)
Q Consensus 105 seA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (447)
+.++..++.... .+++.|++.++.|+....+ ....|.... .++. .
T Consensus 171 ~~an~~~i~al~--------~~Gd~Vi~d~~~h~s~~~~-~~~~Ga~v~------------~~~~----------~---- 215 (489)
T PLN02483 171 YATNSTIIPALI--------GKGGLIISDSLNHNSIVNG-ARGSGATIR------------VFQH----------N---- 215 (489)
T ss_pred HHHHHHHHHHhC--------CCCCEEEEcchhhHHHHHH-HHHcCCeEE------------EEeC----------C----
Confidence 999988777653 2346677656555554333 332332110 0110 0
Q ss_pred HHHHHHHHHHHHHHhh----CC-----CcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCc---
Q 013204 185 YSTRLANNLEDLILKE----GP-----ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR--- 252 (447)
Q Consensus 185 ~~~~~~~~le~~l~~~----~~-----~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~--- 252 (447)
+.+++++.+... .+ ....+|++|++.++.|.+.+ +++|.++|++||+++|+||+|+ +|.
T Consensus 216 ----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~----l~~I~~la~~~~~~livDEa~s-~g~~G~ 286 (489)
T PLN02483 216 ----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK----LPEIVAVCKKYKAYVYLDEAHS-IGAVGK 286 (489)
T ss_pred ----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC----HHHHHHHHHHcCCEEEEECcCc-cCccCC
Confidence 124555554321 11 12458899999999998877 9999999999999999999997 433
Q ss_pred cccccccccCCCC---CCee--eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCC--CCCCcHHHHHHHHHHH
Q 013204 253 LGTMFGCDKYSIK---PDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF--TYSGHPVSCAVAIEAL 325 (447)
Q Consensus 253 ~g~~~~~~~~~~~---~d~v--~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--t~~~~~~~~~aa~a~l 325 (447)
+|.. ..+++++. .|++ +|||++++. .|++++++++++.+... .... ..+.+|..+.++.++|
T Consensus 287 ~G~g-~~~~~~v~~~~~dI~~~SfSKs~g~~---GG~i~~~~~li~~l~~~-------~~~~~~~~~~~p~~~~~~~aaL 355 (489)
T PLN02483 287 TGRG-VCELLGVDPADVDIMMGTFTKSFGSC---GGYIAGSKELIQYLKRT-------CPAHLYATSMSPPAVQQVISAI 355 (489)
T ss_pred CCCc-hHHhcCCCcccCcEEEEecchhcccC---ceEEEcCHHHHHHHHHh-------CccccccCCcCHHHHHHHHHHH
Confidence 4432 34555554 3666 789999753 38899999999988632 1111 2234566666777888
Q ss_pred HHHhhh-------cHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHc
Q 013204 326 KIYKER-------NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH 398 (447)
Q Consensus 326 ~~~~~~-------~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 398 (447)
+.+..+ +..++++++.+++++.|+++ +..+... ..+.+.++.+.... ....+.++|+++
T Consensus 356 ~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~~--~~sp~~~l~l~~~~-----------~~~~~~~~Ll~~ 421 (489)
T PLN02483 356 KVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GFEVLGD--NDSPVMPIMLYNPA-----------KIPAFSRECLKQ 421 (489)
T ss_pred HHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CCcccCC--CCCCEEEEEECCHH-----------HHHHHHHHHHHC
Confidence 766422 24567888888899988876 3222111 11233344433211 134588889999
Q ss_pred CceEEeeC--------CEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 399 GMLVRVSG--------DNIMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 399 Gi~~~~~g--------~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
||.+.+.+ +.+|++++..+|+|+|++++++|+++++.+.
T Consensus 422 GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 422 NVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred CcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 99998432 4699999999999999999999999987654
No 105
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.95 E-value=1.3e-25 Score=203.83 Aligned_cols=319 Identities=19% Similarity=0.230 Sum_probs=235.7
Q ss_pred CCHHHHHHHHHHHhcCC---cccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCC
Q 013204 50 SEPRLVAAATAQLNTLP---FYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPN 126 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~ 126 (447)
.||+|.+|+.+.+++.+ .+.+...+.+....+|+++++++. .++..++++|-.-||+..+..+-+. =
T Consensus 186 ~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LH---qK~aALlFsSCfVANDstLftLak~-------l 255 (570)
T KOG1360|consen 186 RHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLH---QKEAALLFSSCFVANDSTLFTLAKK-------L 255 (570)
T ss_pred CChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHh---cCcceeeeeeeeeccchHHHHHHHH-------C
Confidence 79999999999998743 345566778889999999999996 5667788888999999988854211 1
Q ss_pred cceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEE
Q 013204 127 KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIA 206 (447)
Q Consensus 127 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a 206 (447)
..-+|.-+..-|.+.+..+..++.+-+ .|.|+++++|++++....+...+
T Consensus 256 pgcei~SD~gNHASMI~GIrns~v~K~------------------------------IFrHND~~hL~~lL~~~~~svPK 305 (570)
T KOG1360|consen 256 PGCEIFSDEGNHASMIQGIRNSRVPKH------------------------------IFRHNDLDHLEQLLQSSPKSVPK 305 (570)
T ss_pred CCcEEeccccchHHHHHHhhhcCCcce------------------------------eeccCCHHHHHHHHHhCCCCCCc
Confidence 233444455778887766665544321 35566679999999987777788
Q ss_pred EEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccc--cccCCC--CCCee--eecccCCCccc
Q 013204 207 AFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG--CDKYSI--KPDLV--SFAKALSSAYM 280 (447)
Q Consensus 207 ~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~--~~~~~~--~~d~v--~~sK~l~gg~~ 280 (447)
.|-+|.|+++.|.++| |++|++++++||++..+||||. .|..|..++ -+..|+ +.||+ |++|++|.-+
T Consensus 306 ivAFEtVhSM~Gavcp----leelcDvah~yGAiTFlDEVHA-VGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG- 379 (570)
T KOG1360|consen 306 IVAFETVHSMDGAVCP----LEELCDVAHKYGAITFLDEVHA-VGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG- 379 (570)
T ss_pred eEEEeeeeccCCCcCC----HHHHHHHHHHhCceeeeehhhh-hccccCCCCCccccCCcchhhhhcccchhhhccccc-
Confidence 9999999999999999 9999999999999999999998 666776543 355665 46888 6899998632
Q ss_pred ceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhc---HHHHHHHHHHHHHHhHhhccCCCce
Q 013204 281 PIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN---IVEQVNKIAPKFQDGVKAFSDSPII 357 (447)
Q Consensus 281 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~ 357 (447)
|++..+..+++.++.-. . . ...|.+.+|+.++.|++++++++.++ ++..-+++.+++++.|.++ +.|++
T Consensus 380 --GYIAat~~LvDmiRSyA--a-G--FIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiPVi 451 (570)
T KOG1360|consen 380 --GYIAATRKLVDMIRSYA--A-G--FIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIPVI 451 (570)
T ss_pred --ceehhhhhHHHHHHHhc--C-c--eEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCccc
Confidence 67999999999887421 1 1 22466778999999999999887542 4555666778888888776 44432
Q ss_pred eeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEee-------C-CEEEEecCCCCCHHHHHHHHHH
Q 013204 358 GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------G-DNIMMSPPFIMSPEEVDELISK 428 (447)
Q Consensus 358 ~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------g-~~iR~~~~~~~t~e~i~~~~~~ 428 (447)
. .-..++.+.+.+.. +.....+.|+ ++||++... | +.+|+.|...||++.++.+++.
T Consensus 452 ~---~pSHIiPv~vgda~-----------l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~ 517 (570)
T KOG1360|consen 452 P---NPSHIIPVRVGDAA-----------LAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNA 517 (570)
T ss_pred C---CCcceeeeeccCHH-----------HHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHH
Confidence 1 12233344443322 3444555554 678988743 3 5699999999999999999999
Q ss_pred HHHHHHHH
Q 013204 429 YGKALKAT 436 (447)
Q Consensus 429 l~~~l~~~ 436 (447)
|..+.+++
T Consensus 518 l~~vw~~v 525 (570)
T KOG1360|consen 518 LLDVWNEV 525 (570)
T ss_pred HHHHHHHc
Confidence 99988775
No 106
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=1.5e-24 Score=210.19 Aligned_cols=340 Identities=14% Similarity=0.128 Sum_probs=229.2
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCC-cccccCcCCChHHHHHHHHHHHhcC-cCCCC-eEEEeCChhhHHH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEAND 109 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~-~v~~~~sGseA~~ 109 (447)
.+.+|+..|... + ..++.+.+++.+++.+.. .++ ...+..+....+++++.+.+. ...++ +|+.|+|+++|+.
T Consensus 28 ~~vi~l~iG~Pd--~-~~p~~i~~a~~~a~~~~~~~Y~-~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~ 103 (393)
T COG0436 28 EDVIDLSIGEPD--F-PTPEHIIEAAIEALEEGGTHYT-PSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALF 103 (393)
T ss_pred CCEEEeCCCCCC--C-CCCHHHHHHHHHHHhcccCCCC-CCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHH
Confidence 468888766321 1 267889999999998754 333 334556666666677666653 23444 4999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCC-CcccCCCCCCChhHHHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTR 188 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 188 (447)
.++.... .+.+.||+.+|.|..+.......++.+..... +.. +.|. .
T Consensus 104 ~~~~a~~--------~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l-----------~~~~~~f~-------------~ 151 (393)
T COG0436 104 LAFLALL--------NPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPL-----------DEEENGFK-------------P 151 (393)
T ss_pred HHHHHhc--------CCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeC-----------CcCccCCc-------------C
Confidence 9998764 44577999999998887777666665432210 000 0111 0
Q ss_pred HHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc-cc-ccccCCC--
Q 013204 189 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MF-GCDKYSI-- 264 (447)
Q Consensus 189 ~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~-~~-~~~~~~~-- 264 (447)
+++++++.+. +++.++++..|.|++| .+.++++|++|.++|++||+++|+||+|.++...|. .. ..+..+.
T Consensus 152 d~~~l~~~i~---~ktk~i~ln~P~NPTG--av~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~ 226 (393)
T COG0436 152 DLEDLEAAIT---PKTKAIILNSPNNPTG--AVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARD 226 (393)
T ss_pred CHHHHHhhcC---ccceEEEEeCCCCCcC--cCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcc
Confidence 1377777776 3445566667777776 567899999999999999999999999999988874 22 2222221
Q ss_pred -CCCeeeecccCCCcccceeEEEeC-hhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh----hcHHHHHH
Q 013204 265 -KPDLVSFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE----RNIVEQVN 338 (447)
Q Consensus 265 -~~d~v~~sK~l~gg~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~----~~~~~~~~ 338 (447)
...+-+|||.++..+||+|+++++ +++++.+.. +....+++.+.+++.++.++|+.-.. +...+.++
T Consensus 227 ~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~-------~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~ 299 (393)
T COG0436 227 RTITINSFSKTYGMTGWRIGWVVGPPEELIAALRK-------LKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYR 299 (393)
T ss_pred eEEEEecccccccccccceeEeecChHHHHHHHHH-------HHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHH
Confidence 112236899777655999999999 778887752 23345667888999999999974311 22234566
Q ss_pred HHHHHHHHhHhhccCCCceeeEe-eeeeEE-EEEeecCCCCCCCCCCCcchHHHHHHHHHH-cCceEEeeC--------C
Q 013204 339 KIAPKFQDGVKAFSDSPIIGEIR-GTGLIL-GTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVSG--------D 407 (447)
Q Consensus 339 ~~~~~l~~~L~~l~~~~~~~~~~-~~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~g--------~ 407 (447)
++++.+.+.|+++ +.+.... ..|.+. .+++.... ....|+.+|++ .||.+.|+. +
T Consensus 300 ~rrd~l~~~l~~~---~g~~~~~~p~Ga~Y~~~~i~~~~-----------d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~ 365 (393)
T COG0436 300 ERRDLLVEALNEI---GGLSVVKPPEGAFYLFPKIPELL-----------DSEEFAKKLLEEAGVAVVPGSGFGEPPGEG 365 (393)
T ss_pred HHHHHHHHHHHhc---CCeeeccCCCeeEEEEeecCCCC-----------CHHHHHHHHHHhCCEEEecccccCCCCCCC
Confidence 7777777777765 3233333 445544 34443321 14457777665 579998851 4
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 408 NIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 408 ~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
.+|++ +..+++++++++++|.+.++..
T Consensus 366 ~vRis--~~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 366 YVRLS--LATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred eEEEE--EecCHHHHHHHHHHHHHHHHhc
Confidence 69999 8888899999999999988753
No 107
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=8.2e-24 Score=204.75 Aligned_cols=328 Identities=22% Similarity=0.276 Sum_probs=215.3
Q ss_pred CEEEecCCccccccCCCC-CHHHHHHHHHHHhcCCcc---cccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHH
Q 013204 33 KKYLDSLAGLWCTALGGS-EPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN 108 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~ 108 (447)
+.||.|+++ .+||+. ||+|++++.+++++.... +....+..+...++.+.+++++. .+..+++++|++++
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~~~~iv~~sg~~a~ 74 (349)
T cd06454 1 KKVLNFCSN---DYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHG---KEAALVFSSGYAAN 74 (349)
T ss_pred CCceecccC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhC---CCCEEEeccHHHHH
Confidence 468999877 789985 999999999999874332 11223467788899999999873 23567788999999
Q ss_pred HHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHH
Q 013204 109 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 188 (447)
Q Consensus 109 ~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (447)
..+++.+. .+++.|++.++. |..........+.... .++..
T Consensus 75 ~~~~~~~~--------~~gd~Vl~~~~~-~~~~~~~~~~~g~~~~------------~~~~~------------------ 115 (349)
T cd06454 75 DGVLSTLA--------GKGDLIISDSLN-HASIIDGIRLSGAKKR------------IFKHN------------------ 115 (349)
T ss_pred HHHHHHhc--------CCCCEEEEehhh-hHHHHHHHHHcCCceE------------EecCC------------------
Confidence 98887653 234667776554 4443333222222110 01100
Q ss_pred HHHHHHHHHHhhC-CCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-ccccC---C
Q 013204 189 LANNLEDLILKEG-PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKY---S 263 (447)
Q Consensus 189 ~~~~le~~l~~~~-~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~~~~~---~ 263 (447)
+.+++++++.... +.++++|+++++++.+|...+ +++|.++|++||+++|+||+|. +|..+... ..... .
T Consensus 116 ~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~-~g~~~~~~~~~~~~~~~~ 190 (349)
T cd06454 116 DMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP----LPELVDLAKKYGAILFVDEAHS-VGVYGPHGRGVEEFGGLT 190 (349)
T ss_pred CHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC----HHHHHHHHHHcCCEEEEEcccc-ccccCCCCCChhhhcccc
Confidence 1256777776432 245678889998888887765 8999999999999999999986 44333211 11111 1
Q ss_pred CCCCee--eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh-hcHHHHHHHH
Q 013204 264 IKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKI 340 (447)
Q Consensus 264 ~~~d~v--~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~~~~~~~~~ 340 (447)
...|++ +++|.++. +.|+++.++++++.+..... . ...+.+.++..++++.++++.+.+ ++..+++.++
T Consensus 191 ~~~~i~~~s~sK~~~~---~gG~i~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 262 (349)
T cd06454 191 DDVDIIMGTLGKAFGA---VGGYIAGSKELIDYLRSYAR---G--FIFSTSLPPAVAAAALAALEVLQGGPERRERLQEN 262 (349)
T ss_pred ccCcEEEeechhhhcc---cCCEEECCHHHHHHHHHhch---h--hhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 235665 57898875 34788889998887753211 1 112335667778888888887654 4567788888
Q ss_pred HHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee--------CCEEEEe
Q 013204 341 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------GDNIMMS 412 (447)
Q Consensus 341 ~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------g~~iR~~ 412 (447)
.+.+++.|+++ +..... ...+.+..+.+.+.. ....+.+.|+++||.+.+. ++.+|++
T Consensus 263 ~~~l~~~l~~~-g~~~~~--~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~ 328 (349)
T cd06454 263 VRYLRRGLKEL-GFPVGG--SPSHIIPPLIGDDPA-----------KAVAFSDALLERGIYVQAIRYPTVPRGTARLRIS 328 (349)
T ss_pred HHHHHHHHHhc-CCcccC--CCCCcEEEEeCCChH-----------HHHHHHHHHHhCCceEEEecCCccCCCCCeEEEE
Confidence 88888888776 222211 111222222221111 2456888999999998753 2579999
Q ss_pred cCCCCCHHHHHHHHHHHHHH
Q 013204 413 PPFIMSPEEVDELISKYGKA 432 (447)
Q Consensus 413 ~~~~~t~e~i~~~~~~l~~~ 432 (447)
++..++++++++++++|+++
T Consensus 329 ~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 329 LSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EeCCCCHHHHHHHHHHHHHh
Confidence 99889999999999999764
No 108
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.93 E-value=6.5e-23 Score=200.49 Aligned_cols=343 Identities=14% Similarity=0.150 Sum_probs=214.6
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 110 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~ 110 (447)
+++.++++..+. +.++ .+|.+.+++.+.+...... .........++.+.+++.+. .+.+++++++|+++|+..
T Consensus 26 ~~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~~---~y~~~~g~~~lr~~ia~~l~-~~~~~v~~~~g~t~al~~ 98 (380)
T PRK06225 26 KDKEMIWMGQNT--NHLG-PHEEVREAMIRCIEEGEYC---KYPPPEGFPELRELILKDLG-LDDDEALITAGATESLYL 98 (380)
T ss_pred hcCCeEEccCCC--CCCC-CCHHHHHHHHHHHhcCCCC---CCCCCcchHHHHHHHHHhcC-CCCCcEEEeCCHHHHHHH
Confidence 356788887653 4565 6899999999988653211 01223346778888888873 456789999999999999
Q ss_pred HHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHH
Q 013204 111 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190 (447)
Q Consensus 111 Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (447)
+++.+. ..++.|++.++.|+........ .|.... .++.... + +.+ ..+.
T Consensus 99 ~~~~~~--------~~gd~vl~~~p~y~~~~~~~~~-~g~~~~------------~v~~~~~-----~----~~~-~~d~ 147 (380)
T PRK06225 99 VMRAFL--------SPGDNAVTPDPGYLIIDNFASR-FGAEVI------------EVPIYSE-----E----CNY-KLTP 147 (380)
T ss_pred HHHHhc--------CCCCEEEEcCCCCcchHHHHHH-hCceEE------------eeccccc-----c----CCc-cCCH
Confidence 998763 2346799999999865432222 221110 1111000 0 000 0113
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccC-CCCCCee
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY-SIKPDLV 269 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~-~~~~d~v 269 (447)
+++++.+. ++..++++++|.|++ | ...+.+.+++|.++|++||+++|+||+|.+|.. +........ ....++.
T Consensus 148 ~~l~~~~~---~~~~~v~l~~p~Npt-G-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~i~~~ 221 (380)
T PRK06225 148 ELVKENMD---ENTRLIYLIDPLNPL-G-SSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAR-EHTLAAEYAPEHTVTSY 221 (380)
T ss_pred HHHHhhcC---CCceEEEEeCCCCCC-C-cCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhc-cCCchhhcCCCCEEEEe
Confidence 55665553 333344556676655 4 345778899999999999999999999987632 221111110 1112345
Q ss_pred eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHh
Q 013204 270 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDG 347 (447)
Q Consensus 270 ~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~--~~~~~~~~~~~~~l~~~ 347 (447)
+|||.++.+++++|++++++++++.+... ...+++.+.+++.++.++++.... +...+..+++.+.+.+.
T Consensus 222 s~SK~~g~~G~RiG~i~~~~~l~~~~~~~--------~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 293 (380)
T PRK06225 222 SFSKIFGMAGLRIGAVVATPDLIEVVKSI--------VINDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEA 293 (380)
T ss_pred echhhcCCccceeEEEecCHHHHHHHHHH--------HhcccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 78999974448999999999998887632 123566677888777777753211 12223334444555566
Q ss_pred HhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-------C-CEEEEecCCCCCH
Q 013204 348 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------G-DNIMMSPPFIMSP 419 (447)
Q Consensus 348 L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------g-~~iR~~~~~~~t~ 419 (447)
|+++..... ......|.++.+.+..... ....+.+.|.++||.+.++ + +.+|++ +..++
T Consensus 294 L~~~~~~~~-~~~~~~g~~~~~~~~~~~~----------~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s--~~~~~ 360 (380)
T PRK06225 294 VDEIEGVFL-PVYPSHGNMMVIDISEAGI----------DPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVS--FSIPR 360 (380)
T ss_pred HHhCcCCcc-ccCCCCCeEEEEEcccccC----------CHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEE--eCCCH
Confidence 665422211 1233456677777653211 1345888889999998864 1 369999 56789
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 013204 420 EEVDELISKYGKALKATEE 438 (447)
Q Consensus 420 e~i~~~~~~l~~~l~~~~~ 438 (447)
+++++++++|+++++++|+
T Consensus 361 e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 361 EQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999999998764
No 109
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.93 E-value=8.9e-24 Score=196.80 Aligned_cols=345 Identities=19% Similarity=0.241 Sum_probs=222.2
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHHHhcC-CcccccC--cCCChHHH-HHHHHHHHhcCcCCCCeEEEeCChhhHHH
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTL-PFYHSFW--NRTTKPSL-DLAKELLEMFTASKMAKVFFTNSGSEAND 109 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~--~~~~~~~~-~l~~~l~~~~~~~~~~~v~~~~sGseA~~ 109 (447)
.|+|..+.. + -+|+++++|....... +..++.. +....... +-.+.+++.+ +.++.+++||++|||+|.
T Consensus 3 iYlD~~ATT---p---~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll-ga~~~eIiFTSG~TEsnN 75 (386)
T COG1104 3 IYLDNAATT---P---VDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL-GADPEEIIFTSGATESNN 75 (386)
T ss_pred ccccccccC---C---CCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh-CCCCCeEEEecCCcHHHH
Confidence 589987763 2 5799999999998764 2212211 22222333 3444555554 456689999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 189 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (447)
.||+.+....+.. .+++++|+ +..-|-.....+..- ...++. +..+++. ..+..+
T Consensus 76 laI~g~~~a~~~~--~~~~HIIt-s~iEH~aVl~~~~~L----e~~g~~-----Vtyl~V~-------------~~G~v~ 130 (386)
T COG1104 76 LAIKGAALAYRNA--QKGKHIIT-SAIEHPAVLNTCRYL----ERQGFE-----VTYLPVD-------------SNGLVD 130 (386)
T ss_pred HHHHhhHHhhhcc--cCCCeEEE-cccccHHHHHHHHHH----HhcCCe-----EEEeCCC-------------CCCeEc
Confidence 9999654332221 23345554 566676654433211 011222 1122221 122333
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV 269 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v 269 (447)
+++|++.+. +++.+|.+..+|++.|++.| +++|.++|+++|+++++|.||+ +|+.. .+...+..|++
T Consensus 131 ~e~L~~al~----~~T~LVSim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa-~Gkip----i~~~~~~vD~l 197 (386)
T COG1104 131 LEQLEEALR----PDTILVSIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA-VGKIP----IDLEELGVDLL 197 (386)
T ss_pred HHHHHHhcC----CCceEEEEEecccCeeeccc----HHHHHHHHHHcCCeEEEehhhh-cCcee----ccccccCcceE
Confidence 588888886 45779999999999999999 9999999999999999999998 87763 33333448999
Q ss_pred eecc-cCCCcccceeEEEeChhH-HHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHH
Q 013204 270 SFAK-ALSSAYMPIGAILVSPEV-SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQ 345 (447)
Q Consensus 270 ~~sK-~l~gg~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~--~~~~~~~~~~~~~l~ 345 (447)
+||- .++|+ .++|+++.++.+ ...+..+..+.+.+..+ +.|..++++.-+++++..+ +....++.+++++|.
T Consensus 198 s~SaHK~~Gp-kGiGaLyv~~~~~~~p~i~GGgQE~g~RsG---Tenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~ 273 (386)
T COG1104 198 SFSAHKFGGP-KGIGALYVRPGVRLEPLIHGGGQERGLRSG---TENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLE 273 (386)
T ss_pred EeehhhccCC-CceEEEEECCCCccCceeccCcCCCCCCCC---CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9986 67776 799999987765 33333333333333322 2344455544455554332 345577788888888
Q ss_pred HhHhhc-cCCCceee-EeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee------------------
Q 013204 346 DGVKAF-SDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------------------ 405 (447)
Q Consensus 346 ~~L~~l-~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------------------ 405 (447)
+.|.+. +...+... .......+.+.|+.-. ++.+...|..+||.++.+
T Consensus 274 ~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~------------gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG 341 (386)
T COG1104 274 DGLLEIIPDVYLNGDDEPRLPNILNFSFPGVE------------GESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMG 341 (386)
T ss_pred HHHHhcCCcEEEcCCcccCCCCeEEEEeCCCc------------HHHHHHhccccCeEEeccccccCCCCCccHHHHHcC
Confidence 888765 33222222 2333344455555432 445666777778888743
Q ss_pred ------CCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 013204 406 ------GDNIMMSPPFIMSPEEVDELISKYGKALKATEER 439 (447)
Q Consensus 406 ------g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 439 (447)
.+.|||+....+|++|++.+++.|.+.++++++.
T Consensus 342 ~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~ 381 (386)
T COG1104 342 ISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLREL 381 (386)
T ss_pred CChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 1569999999999999999999999999998764
No 110
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.92 E-value=2.4e-22 Score=183.45 Aligned_cols=329 Identities=12% Similarity=0.080 Sum_probs=226.8
Q ss_pred CCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc-CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcc
Q 013204 50 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 128 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~ 128 (447)
.+|+|++|+.++++.+.++|+ ..+.+....+..+.++.+.. .++++++|+++.-.++..+|+..+ ..++
T Consensus 39 ~pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T--------~~gd 108 (388)
T COG1168 39 TPPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT--------KPGD 108 (388)
T ss_pred CCHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC--------cCCC
Confidence 689999999999999877665 33555677777888877654 577899999999999999999875 4468
Q ss_pred eEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCc-EEE
Q 013204 129 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET-IAA 207 (447)
Q Consensus 129 ~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~-~a~ 207 (447)
.|++.+|.|+.... .....+......++.... .-+. .++++||+.+.. .+ ...
T Consensus 109 ~Vvi~tPvY~PF~~-~i~~n~R~~i~~pL~~~~-~~y~---------------------iD~~~LE~~~~~---~~vkl~ 162 (388)
T COG1168 109 GVVIQTPVYPPFYN-AIKLNGRKVIENPLVEDD-GRYE---------------------IDFDALEKAFVD---ERVKLF 162 (388)
T ss_pred eeEecCCCchHHHH-HHhhcCcEEEeccccccC-CcEE---------------------ecHHHHHHHHhc---CCccEE
Confidence 99999999987643 233344333222221110 0111 125889988874 33 456
Q ss_pred EEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc-ccccccCCCC-CC--eee--ecccCCCcccc
Q 013204 208 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MFGCDKYSIK-PD--LVS--FAKALSSAYMP 281 (447)
Q Consensus 208 vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~-~~~~~~~~~~-~d--~v~--~sK~l~gg~~~ 281 (447)
|+|+|.|+.| .+++.++|.+|.++|++||+++|+||+|+.+...|. .+.+...... .| +++ -||++.-+++.
T Consensus 163 iLCnPHNP~G--rvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~ 240 (388)
T COG1168 163 ILCNPHNPTG--RVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLK 240 (388)
T ss_pred EEeCCCCCCC--ccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhh
Confidence 6677777766 789999999999999999999999999999977773 3322211110 12 223 36988765588
Q ss_pred eeEEEe-ChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHhHhhccCCCcee
Q 013204 282 IGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIG 358 (447)
Q Consensus 282 ~g~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~ 358 (447)
.++++. ++++...+... +........|.+++.|..++.+.-+. +++.+.++.+.+++.+.+++. .|.+.
T Consensus 241 ~a~~Ii~n~~lr~~~~~~------l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~--~P~v~ 312 (388)
T COG1168 241 CAYIIISNRELRAKFLKR------LKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKH--LPGVK 312 (388)
T ss_pred heeEEecCHHHHHHHHHH------HHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhh--CCCcE
Confidence 888775 56665555431 11223556788999999998875432 456778888888888888663 35566
Q ss_pred eEeeeeeEE-EEEeecCCCCCCCCCCCcchHHHHHHHHHHc-CceEEee------C-CEEEEecCCCCCHHHHHHHHHHH
Q 013204 359 EIRGTGLIL-GTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS------G-DNIMMSPPFIMSPEEVDELISKY 429 (447)
Q Consensus 359 ~~~~~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~------g-~~iR~~~~~~~t~e~i~~~~~~l 429 (447)
....+|+++ ++++..-..+ .+.+.+.|+++ +|.+.++ | +.+|++ +.++.+-+++++++|
T Consensus 313 v~~p~gTYL~WLD~r~l~l~----------d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN--~acpr~~L~eal~ri 380 (388)
T COG1168 313 VTEPQGTYLAWLDCRELGLD----------DSELAEFLLEEAKVALSPGSTFGEEGSGFVRLN--FACPRAILEEALERL 380 (388)
T ss_pred EecCCCceeeeeeccccCCC----------hHHHHHHHHHhhcEeccCCCccCcCCCceEEEe--cCCCHHHHHHHHHHH
Confidence 677888865 5777653321 13456666543 4555433 3 459999 899999999999999
Q ss_pred HHHHHHH
Q 013204 430 GKALKAT 436 (447)
Q Consensus 430 ~~~l~~~ 436 (447)
+++++.+
T Consensus 381 ~~al~~~ 387 (388)
T COG1168 381 KRALKKR 387 (388)
T ss_pred HHHHhcc
Confidence 9888753
No 111
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=2.5e-22 Score=195.53 Aligned_cols=325 Identities=16% Similarity=0.154 Sum_probs=203.1
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhc----C-cCCCCeEEEeCChhhHH
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----T-ASKMAKVFFTNSGSEAN 108 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~-~~~~~~v~~~~sGseA~ 108 (447)
..+|++.+. ++++ .+|.+++++.+.+...... ....+.....+|.+.+++++ . ...+++|++++|+++++
T Consensus 27 ~~i~l~~~~--~~~~-~~~~~~~al~~~l~~~~~~--~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l 101 (368)
T PRK03317 27 VPVRLNTNE--NPYP-PSPALVADIAEAVAEAAAG--LNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEIL 101 (368)
T ss_pred ceeEecCCC--CCCC-CCHHHHHHHHHHHhhhhhh--hccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHH
Confidence 468887664 5565 7889999999887531100 00112222345555555554 2 24678999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHH
Q 013204 109 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 188 (447)
Q Consensus 109 ~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (447)
..+++... ..++.|++.+|+|++........+ .... .++..+.+. .
T Consensus 102 ~~~~~~~~--------~~gd~v~v~~P~y~~~~~~~~~~g-~~~~------------~~~~~~~~~-------------~ 147 (368)
T PRK03317 102 QQLLQAFG--------GPGRTALGFVPSYSMHPIIARGTH-TEWV------------EGPRAADFT-------------L 147 (368)
T ss_pred HHHHHHhc--------CCCCEEEEeCCChHHHHHHHHhcC-CeeE------------EcccCCCCC-------------C
Confidence 99998764 334779999999988754433211 1110 011000000 0
Q ss_pred HHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCe
Q 013204 189 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL 268 (447)
Q Consensus 189 ~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~ 268 (447)
+++++++.+... ++.++++++.++..|.+.+ .+++.++|+.+++++|+||+|++|++.|........+..|++
T Consensus 148 d~~~l~~~~~~~---~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~ 220 (368)
T PRK03317 148 DVDAAVAAIAEH---RPDVVFLTSPNNPTGTALP----LDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRL 220 (368)
T ss_pred CHHHHHHHHhcc---CCCEEEEeCCCCCCCCCCC----HHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCE
Confidence 136677766532 2233444444555665555 667777777778999999999998766644334443445676
Q ss_pred e---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHH
Q 013204 269 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKF 344 (447)
Q Consensus 269 v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~~~~~~~~~~~~l 344 (447)
+ +|||.++.+++|+|++++++++++.+... . .++..++++++++.++|+..+. .+..++++++.+.+
T Consensus 221 i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~-------~--~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l 291 (368)
T PRK03317 221 VVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLV-------R--LPYHLSAVTQAAARAALRHADELLASVAALRAERDRV 291 (368)
T ss_pred EEEEechhhhccchhhhhhhhCCHHHHHHHHhc-------C--CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 6 78999984338999999999999988631 1 3567788899888888864321 11223334444445
Q ss_pred HHhHhhccCCCceeeEeeeeeEEEE-EeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC--CEEEEecCCCCCHHH
Q 013204 345 QDGVKAFSDSPIIGEIRGTGLILGT-EFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEE 421 (447)
Q Consensus 345 ~~~L~~l~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g--~~iR~~~~~~~t~e~ 421 (447)
.+.|++. ++ ....+.|.++.+ .+. ....+.+.|+++||.+.+.+ +.+|++ ..++++
T Consensus 292 ~~~L~~~---g~-~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~~Gv~v~~~~~~~~iRi~---~~~~~~ 350 (368)
T PRK03317 292 VAWLREL---GL-RVAPSDANFVLFGRFA--------------DRHAVWQGLLDRGVLIRDVGIPGWLRVT---IGTPEE 350 (368)
T ss_pred HHHHHHC---CC-EeCCCCCcEEEEeccC--------------CHHHHHHHHHHCCEEEEeCCCCCeEEEe---cCCHHH
Confidence 5555443 22 222344554333 221 13458888999999998765 579999 347889
Q ss_pred HHHHHHHHHHHHH
Q 013204 422 VDELISKYGKALK 434 (447)
Q Consensus 422 i~~~~~~l~~~l~ 434 (447)
+++++++|+++++
T Consensus 351 ~~~~~~~l~~~~~ 363 (368)
T PRK03317 351 NDAFLAALAEVLA 363 (368)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988874
No 112
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.91 E-value=5.2e-22 Score=189.14 Aligned_cols=322 Identities=18% Similarity=0.262 Sum_probs=223.9
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHH
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVK 113 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~ 113 (447)
..+|++++- +++| .+|++.+++.+.++....| |.....++.+.+++.+.....+.|+.++|.+|.+...++
T Consensus 23 ~~i~LssNe--nP~g-p~~~~~~~~~~~~~~~~rY------Pd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~ 93 (356)
T COG0079 23 GIIKLSSNE--NPYG-PPPKVIEAIRAALDKLNRY------PDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVR 93 (356)
T ss_pred cceeecCCC--CCCC-CCHHHHHHHHHHHHhhccC------CCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHH
Confidence 689998876 8888 4689999998888754332 455678888999888743567799999999999999999
Q ss_pred HHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHH
Q 013204 114 LVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 193 (447)
Q Consensus 114 ~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 193 (447)
+.. .+++.|++..|+|.-+...+...+.... .++..+ |. .++
T Consensus 94 ~~~--------~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~-------------~v~~~~-~~----------------~d~ 135 (356)
T COG0079 94 AFV--------EPGDTVLIPEPTFSMYEIAAQLAGAEVV-------------KVPLKE-FR----------------LDL 135 (356)
T ss_pred Hhh--------cCCCEEEEcCCChHHHHHHHHhcCCeEE-------------Eecccc-cc----------------cCH
Confidence 875 3347899999999777655555443221 122211 11 233
Q ss_pred HHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee---e
Q 013204 194 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV---S 270 (447)
Q Consensus 194 e~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v---~ 270 (447)
+.++....++...+++++|.|++| ...+.+.++++.+.|.+ +.+||+||+|..|.. .-......-.++++ |
T Consensus 136 ~~~~~~~~~~~~lv~i~nPNNPTG--~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~---~~~~~l~~~~~nlivlRT 209 (356)
T COG0079 136 DAILAAIRDKTKLVFLCNPNNPTG--TLLPREELRALLEALPE-GGLVVIDEAYIEFSP---ESSLELLKYPPNLIVLRT 209 (356)
T ss_pred HHHHHhhhcCCCEEEEeCCCCCCC--CCCCHHHHHHHHHhCCC-CcEEEEeCchhhcCC---chhhhhccCCCCEEEEEe
Confidence 344333222334567777888887 34567888888888888 999999999998854 11122222123344 7
Q ss_pred ecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHHHHhHh
Q 013204 271 FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGVK 349 (447)
Q Consensus 271 ~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~ 349 (447)
|||+++-+++|+|++++++++++.+... ...|..+.++.+++.++++.-+ .++..+.+.+.++++.+.|+
T Consensus 210 fSKa~gLAGlRlGy~ia~~~~i~~l~~v---------r~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~ 280 (356)
T COG0079 210 FSKAFGLAGLRVGYAIANPELIAALNKV---------RPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALK 280 (356)
T ss_pred cHHhhhcchhceeeccCCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998876559999999999999999742 2477778889998888886431 12334555556666666666
Q ss_pred hccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC------CEEEEecCCCCCHHHHH
Q 013204 350 AFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------DNIMMSPPFIMSPEEVD 423 (447)
Q Consensus 350 ~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g------~~iR~~~~~~~t~e~i~ 423 (447)
.+ ++....++.+.|+.+.+.... ...+.+.|+++||+++.++ +.+|++ .-|+|+.+
T Consensus 281 ~~---~~~~v~pS~aNFvlv~~~~~~------------~~~l~~~L~~~giivR~~~~~~~~~~~lRit---vgt~een~ 342 (356)
T COG0079 281 AL---GLFGVFPSQANFVLVRVPDAE------------AAALAEALLKKGILVRDCSSVGLLPGYLRIT---VGTPEEND 342 (356)
T ss_pred hC---CCCeecCCCCcEEEEECCCcc------------HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEE---eCCHHHHH
Confidence 65 322233445777777765411 2347899999999999874 379999 67888889
Q ss_pred HHHHHHHHHHHH
Q 013204 424 ELISKYGKALKA 435 (447)
Q Consensus 424 ~~~~~l~~~l~~ 435 (447)
+++++|.++++.
T Consensus 343 ~ll~AL~~~~~~ 354 (356)
T COG0079 343 RLLAALREVLKG 354 (356)
T ss_pred HHHHHHHHHHhc
Confidence 999999988764
No 113
>PRK07682 hypothetical protein; Validated
Probab=99.91 E-value=8.4e-22 Score=192.56 Aligned_cols=340 Identities=14% Similarity=0.121 Sum_probs=208.6
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc-CCCC-eEEEeCChhhHHHHH
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEANDTQ 111 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~-~v~~~~sGseA~~~A 111 (447)
..++|..+. ..++ .++.+.+++.+.+......+....+..+....+++.+.+.+.. ..++ ++++++|+++|+..+
T Consensus 21 ~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 97 (378)
T PRK07682 21 GVISLGVGE--PDFV-TPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVA 97 (378)
T ss_pred CeEEeCCCC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH
Confidence 467876664 3344 4667888888877642222222233445555666666554321 2343 799999999999999
Q ss_pred HHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHH
Q 013204 112 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191 (447)
Q Consensus 112 l~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (447)
++.+. .+++.|++.+++|+.........+.... .++.... . .+ ..+++
T Consensus 98 ~~~l~--------~~gd~vl~~~p~y~~~~~~~~~~g~~~~-------------~~~~~~~-------~---~~-~~d~~ 145 (378)
T PRK07682 98 MRAII--------NPGDEVLIVEPSFVSYAPLVTLAGGVPV-------------PVATTLE-------N---EF-KVQPA 145 (378)
T ss_pred HHHhC--------CCCCEEEEeCCCchhhHHHHHHcCCEEE-------------EeecCCc-------c---CC-CCCHH
Confidence 88663 3457899999999876544333222111 0111000 0 00 01136
Q ss_pred HHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccc-cccCCCCCC---
Q 013204 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPD--- 267 (447)
Q Consensus 192 ~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~-~~~~~~~~d--- 267 (447)
++++.+. ++..+++++.|.|++| ...+.+.+++|.++|++|++++|+||+|.++...+.... ....+..+.
T Consensus 146 ~l~~~~~---~~~~~v~~~~p~NPtG--~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~ 220 (378)
T PRK07682 146 QIEAAIT---AKTKAILLCSPNNPTG--AVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTIL 220 (378)
T ss_pred HHHhhcC---cccEEEEEECCCCCcC--cCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEE
Confidence 6666553 2233444566655554 356788999999999999999999999998865443211 112222222
Q ss_pred eeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHHHHHHH
Q 013204 268 LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAPKFQ 345 (447)
Q Consensus 268 ~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~~~~l~ 345 (447)
+-+|||.++.+++|+|++++++++++.+... .....++.+.+++.++.++|+... -++..+.++++.+.+.
T Consensus 221 ~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 293 (378)
T PRK07682 221 ISGFSKGFAMTGWRLGFIAAPVYFSEAMLKI-------HQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFV 293 (378)
T ss_pred EecCcccccChhhhhhhhhcCHHHHHHHHHH-------HHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 3368999874338999999999999888632 112345567778887777775311 1234456666777777
Q ss_pred HhHhhccCCCceeeEeeeee-EEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEee-------CCEEEEecCCC
Q 013204 346 DGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMMSPPFI 416 (447)
Q Consensus 346 ~~L~~l~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------g~~iR~~~~~~ 416 (447)
+.|+++ +.. ...+.|. ++.+.+..... ....+.+.++ ++||.+.++ .+.+|++ +.
T Consensus 294 ~~L~~~-~~~---~~~p~g~~~~~~~~~~~~~----------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis--~~ 357 (378)
T PRK07682 294 TSFNEI-GLT---CHVPGGAFYAFPSISSTGL----------SSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCS--YA 357 (378)
T ss_pred HHHHHC-CCc---cCCCCeeEEEEEeccCCCC----------CHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEE--eC
Confidence 777765 211 2234444 34444432111 1345777765 789999875 2569999 55
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q 013204 417 MSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 417 ~t~e~i~~~~~~l~~~l~~~ 436 (447)
.+++++++++++|+++++++
T Consensus 358 ~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 358 TSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred CCHHHHHHHHHHHHHHHhhc
Confidence 68999999999999988764
No 114
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=1.4e-22 Score=196.31 Aligned_cols=327 Identities=12% Similarity=0.135 Sum_probs=214.2
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 110 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~ 110 (447)
+++..+|++.|- +++| .+|++++++.+.+.....+ +.....+|.+.+++++ ..++++|++++|+++++..
T Consensus 27 ~~~~~i~l~~ne--n~~~-~~~~v~~a~~~~~~~~~~Y------p~~g~~~Lr~aia~~~-~~~~~~I~vt~Gs~e~i~~ 96 (366)
T PRK01533 27 GDHSFVKLASNE--NPFG-CSPRVLDELQKSWLDHALY------PDGGATTLRQTIANKL-HVKMEQVLCGSGLDEVIQI 96 (366)
T ss_pred CCCceEEeCCCC--CCCC-CCHHHHHHHHHHHHhcCcC------CCCCHHHHHHHHHHHh-CCCcceEEECCCHHHHHHH
Confidence 456889987764 6777 6889999998876543222 3334567888888876 4577899999999999999
Q ss_pred HHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHH
Q 013204 111 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190 (447)
Q Consensus 111 Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (447)
+++... ..++.|++.+|+|.++...+...+ ... ..++..+ +. .++
T Consensus 97 ~~~~l~--------~~gd~vlv~~P~y~~~~~~~~~~g-~~v------------~~v~~~~-~~-------------~d~ 141 (366)
T PRK01533 97 ISRAVL--------KAGDNIVTAGATFPQYRHHAIIEG-CEV------------KEVALNN-GV-------------YDL 141 (366)
T ss_pred HHHHhc--------CCCCEEEEcCCcHHHHHHHHHHcC-CEE------------EEeecCC-CC-------------cCH
Confidence 988763 234789999999988765443322 111 1111100 00 113
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccc-cccccCCCCCCee
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDKYSIKPDLV 269 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~-~~~~~~~~~~d~v 269 (447)
+++++.+. ++...++++.|.|++| ...+.+.+++|.++|++++ ++|+||+|..|...+.. .......-.+.++
T Consensus 142 ~~l~~~~~---~~~~~v~i~~P~NPTG--~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi 215 (366)
T PRK01533 142 DEISSVVD---NDTKIVWICNPNNPTG--TYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNIL 215 (366)
T ss_pred HHHHHHhC---cCCcEEEEeCCCCCCC--CCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEE
Confidence 66666554 2334455666655555 4557788999999998876 57779999876432211 1111111123333
Q ss_pred ---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHHH
Q 013204 270 ---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQ 345 (447)
Q Consensus 270 ---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l~ 345 (447)
+|||.++.+++++|++++++++++.+... . .+++.+.+++.++.++|+.-+ .+...+..++..+++.
T Consensus 216 ~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~-------~--~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~ 286 (366)
T PRK01533 216 VLRTFSKAYGLASFRVGYAVGHEELIEKLNVV-------R--LPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYE 286 (366)
T ss_pred EEeCchHHhcChHHHHhHHhCCHHHHHHHHHh-------c--CCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 58999885449999999999999988631 1 246778888888888885211 1122333344444444
Q ss_pred HhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeCCEEEEecCCCCCHHHHHHH
Q 013204 346 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDEL 425 (447)
Q Consensus 346 ~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g~~iR~~~~~~~t~e~i~~~ 425 (447)
+.++.+ + +....+.|.++.+.+.+ ...+.+.|+++||.+++..+.+|++ ..+.++.+++
T Consensus 287 ~~l~~~---g-~~~~~~~~nf~~~~~~~--------------~~~~~~~l~~~GI~Vr~~~~~iRis---~~~~~~~~~l 345 (366)
T PRK01533 287 SFCKEN---E-IPFYQSQTNFIFLPVEN--------------GGEIYEACAHAGFIIRPFPNGVRIT---VGTREQNEGV 345 (366)
T ss_pred HHHHhC---C-CccCCCcCcEEEEeCCC--------------HHHHHHHHHHCCcEEccCCCceEEe---CCCHHHHHHH
Confidence 445443 2 12234567777776531 2357889999999999987789999 6799999999
Q ss_pred HHHHHHHHHHHHH
Q 013204 426 ISKYGKALKATEE 438 (447)
Q Consensus 426 ~~~l~~~l~~~~~ 438 (447)
+++|+++++..++
T Consensus 346 ~~al~~~~~~~~~ 358 (366)
T PRK01533 346 ISVLQQHFENKKR 358 (366)
T ss_pred HHHHHHHHHhccc
Confidence 9999998876654
No 115
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.91 E-value=4.4e-22 Score=190.46 Aligned_cols=300 Identities=13% Similarity=0.083 Sum_probs=195.7
Q ss_pred cCCC-CCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCC
Q 013204 46 ALGG-SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR 124 (447)
Q Consensus 46 ~lG~-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~ 124 (447)
+||. +||++.++..+.+++.. ++.+.+.++++++++++. .+++++++++||++||..++....
T Consensus 29 ylgl~~~~~~~~~~~~~~~~~~-------g~~~~~~~Le~~lA~~~g-~~~e~ilv~~gg~~a~~~~~~al~-------- 92 (346)
T TIGR03576 29 LTGLAGGFKIDEEDLELLETYV-------GPAIFEEKVQELGREHLG-GPEEKILVFNRTSSAILATILALE-------- 92 (346)
T ss_pred cccCCCChhHHHHHHHHHHHhc-------CCHHHHHHHHHHHHHHcC-CCcceEEEECCHHHHHHHHHHHhC--------
Confidence 3443 79999999999998752 366889999999999973 455899999999999999998763
Q ss_pred CCcceEEEEcC--CCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCC
Q 013204 125 PNKKKFIARQK--SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP 202 (447)
Q Consensus 125 ~~~~~vi~~~~--~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~ 202 (447)
.+++.|++..+ .+|.+........+...+. +.+ +++++. .+
T Consensus 93 ~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~--------------~~~------------------l~~l~~-----~~ 135 (346)
T TIGR03576 93 PPGRKVVHYLPEKPAHPSIPRSCKLAGAEYFE--------------SDE------------------LSELKK-----ID 135 (346)
T ss_pred CCCCEEEECCCCCCCchhHHHHHHHcCCEEec--------------cCC------------------HHHHhh-----Cc
Confidence 23466665322 3555544444333322100 000 122221 12
Q ss_pred CcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcc---ccccccccCCCCCCee--eecccCCC
Q 013204 203 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL---GTMFGCDKYSIKPDLV--SFAKALSS 277 (447)
Q Consensus 203 ~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~---g~~~~~~~~~~~~d~v--~~sK~l~g 277 (447)
.+.+|++++. ++.|.+. +.+.|++|.++|++||+++|+||+|.. +.. |.. ....++ +|++ ++||+|+|
T Consensus 136 -~~~lIiitg~-s~~G~v~-~~~~L~~i~~la~~~~~~livDEAy~~-~~~~~~~~~-~~~~~~--~divv~s~SKalaG 208 (346)
T TIGR03576 136 -GTSLVVITGS-TMDLKVV-SEEDLKRVIKQAKSKEAIVLVDDASGA-RVRRLYGQP-PALDLG--ADLVVTSTDKLMDG 208 (346)
T ss_pred -CceEEEEECC-CCCCccc-CHHHHHHHHHHHHHcCCEEEEECCccc-cccccCCCC-CHHHcC--CcEEEeccchhccc
Confidence 3456677664 6666554 467799999999999999999999973 222 221 112223 4554 68998866
Q ss_pred cccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCce
Q 013204 278 AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPII 357 (447)
Q Consensus 278 g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~ 357 (447)
+++|++++++++++.+... .....++.++++++++.++|+....+...+.++++.+.+++.++++ .+.
T Consensus 209 --~r~G~v~~~~~li~~l~~~-------~~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~~---~~~ 276 (346)
T TIGR03576 209 --PRGGLLAGRKELVDKIKSV-------GEQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKL---NVE 276 (346)
T ss_pred --cceEEEEeCHHHHHHHHHh-------hcCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhC---CCC
Confidence 6899999999999988742 1222334577788889999986544455667777777777766654 211
Q ss_pred eeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee------CCEEEEecCCCCCHH---HHHHHHHH
Q 013204 358 GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------GDNIMMSPPFIMSPE---EVDELISK 428 (447)
Q Consensus 358 ~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------g~~iR~~~~~~~t~e---~i~~~~~~ 428 (447)
+..+.++.+++.... ......+.|.++||++.++ .+.+||+ +..+++ +++.++++
T Consensus 277 ---~~~~~f~~~~~~~~~-----------~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis--~~~~~~~~~~~~~~~~a 340 (346)
T TIGR03576 277 ---RTPTGFVIKGVEEEK-----------LIEIGLDLLRNYGIITITAVGMPGASKTLRFD--LAAKDAERIGDDYLVEA 340 (346)
T ss_pred ---cCCCeEEEEeCCCCC-----------HHHHHHHHHHhCCEEEeCCcccCCCCCeEEEE--EecChHHhcCHHHHHHH
Confidence 112335555553211 0234556677899999984 2579999 555554 79999999
Q ss_pred HHHHH
Q 013204 429 YGKAL 433 (447)
Q Consensus 429 l~~~l 433 (447)
|++.+
T Consensus 341 l~~~~ 345 (346)
T TIGR03576 341 VKDSL 345 (346)
T ss_pred HHhcc
Confidence 98765
No 116
>PRK07324 transaminase; Validated
Probab=99.91 E-value=4.3e-22 Score=193.72 Aligned_cols=336 Identities=14% Similarity=0.131 Sum_probs=204.4
Q ss_pred EeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhH
Q 013204 28 YDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA 107 (447)
Q Consensus 28 ~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA 107 (447)
++..|..++++..+ -+.-..++.+ +++.+++.+....++. .....+|.+.+++++...++++|++++|+++|
T Consensus 21 ~~~~~~~~~~~~~~---e~~~~~~~~~-~~~~~~~~~~~~~Y~~----~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~a 92 (373)
T PRK07324 21 YDIAESCIDSLTLE---ELLALAGKNP-EAFYQELGQKKLTYGW----IEGSPEFKEAVASLYQNVKPENILQTNGATGA 92 (373)
T ss_pred cccccCCCCCCcHH---HHHhccCcch-HHHHHHHhcCCccCCC----CCCCHHHHHHHHHHhcCCChhhEEEcCChHHH
Confidence 34455555555433 1111245667 8888887764333322 22345677778877644567899999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
+..++..+. ..+++|++..|+|..........+.... .++......+.
T Consensus 93 l~~~~~~l~--------~~gd~Vl~~~P~y~~~~~~~~~~g~~v~-------------~v~~~~~~~~~----------- 140 (373)
T PRK07324 93 NFLVLYALV--------EPGDHVISVYPTYQQLYDIPESLGAEVD-------------YWQLKEENGWL----------- 140 (373)
T ss_pred HHHHHHHhC--------CCCCEEEEcCCCchhHHHHHHHcCCEEE-------------EEecccccCCC-----------
Confidence 999988663 3347899999999776544333222111 11111000000
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCC
Q 013204 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD 267 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d 267 (447)
.+++++++.+. + ++++|++...++.+| ...+.+.+++|.++|++||+++|+||+|.++...+..... ....+.
T Consensus 141 ~d~~~l~~~~~---~-~~kli~i~~p~NPtG-~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~--~~~~~~ 213 (373)
T PRK07324 141 PDLDELRRLVR---P-NTKLICINNANNPTG-ALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSI--ADLYEK 213 (373)
T ss_pred CCHHHHHHhCC---C-CCcEEEEeCCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCCh--hhccCC
Confidence 01355665543 2 344555544444445 4567899999999999999999999999987544321111 111222
Q ss_pred ---eeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHH----HHHHH
Q 013204 268 ---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVE----QVNKI 340 (447)
Q Consensus 268 ---~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~----~~~~~ 340 (447)
+-+|||.++..++++|++++++++++.+... ....+++.+.+++.++..+++. .+.+.+ .++++
T Consensus 214 ~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~-------~~~~~~~~~~~~q~~a~~~l~~--~~~~l~~~~~~~~~~ 284 (373)
T PRK07324 214 GISTNSMSKTYSLPGIRVGWIAANEEVIDILRKY-------RDYTMICAGVFDDMLASLALEH--RDAILERNRKIVRTN 284 (373)
T ss_pred EEEEecchhhcCCccceeEEEecCHHHHHHHHHH-------hCcEEecCChHHHHHHHHHHcC--HHHHHHHHHHHHHHH
Confidence 2368998875449999999999998888642 2233556677777777776652 122233 33333
Q ss_pred HHHHHHhHhhccCCCceeeEeeeee-EEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeC-----CEEEEec
Q 013204 341 APKFQDGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-----DNIMMSP 413 (447)
Q Consensus 341 ~~~l~~~L~~l~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g-----~~iR~~~ 413 (447)
.+.+.+.|++ .+.+..+.+.|. +..+.+.... ....+.++|+ +.||.+.|+. +.+|++
T Consensus 285 ~~~l~~~l~~---~~~~~~~~p~gg~~~~i~~~~~~-----------~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis- 349 (373)
T PRK07324 285 LAILDEWVAK---EPRVSYVKPKAVSTSFVKLDVDM-----------PSEDFCLKLLKETGVLLVPGNRFDLEGHVRIG- 349 (373)
T ss_pred HHHHHHHHhc---CCCceEECCCceEEEEEEeCCCC-----------CHHHHHHHHHHhcCEEEECccccCCCCeEEEE-
Confidence 4444444433 333444545543 3444443221 1345777765 6799999873 579999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q 013204 414 PFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 414 ~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
+..+++.+.+++++|++++++
T Consensus 350 -~~~~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 350 -YCCDTETLKKGLKKLSEFLRE 370 (373)
T ss_pred -ecCCHHHHHHHHHHHHHHHHh
Confidence 667899999999999998865
No 117
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.91 E-value=2.9e-21 Score=189.98 Aligned_cols=347 Identities=14% Similarity=0.082 Sum_probs=211.2
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCC-cccccCcCCChHHHHHHHHHHHhcCc-CCC-CeEEEeCChhhHHH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFTA-SKM-AKVFFTNSGSEAND 109 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~-~~v~~~~sGseA~~ 109 (447)
+..+||..+.. ++++ .+|.+.+++.+.+.... ..|+...+..+....+++.+.+.+.. ..+ ++|++++|+++++.
T Consensus 39 ~~~i~l~~g~~-~~~~-p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~ 116 (405)
T PRK06207 39 GRPVDFSHGDV-DAHE-PTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALF 116 (405)
T ss_pred CCceecCCcCC-CCCC-CCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH
Confidence 56778875532 2333 56788898888876431 22232233445566677777665432 345 78999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 189 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (447)
.+++... ..++.|++.+|+|.+........+.... .+++... + +.. .+ ..+
T Consensus 117 ~~~~~l~--------~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~-------------~v~~~~~---~-~~~---~~-~~d 167 (405)
T PRK06207 117 LAVAATV--------ARGDKVAIVQPDYFANRKLVEFFEGEMV-------------PVQLDYL---S-ADK---RA-GLD 167 (405)
T ss_pred HHHHHhc--------CCCCEEEEeCCCchhHHHHHHHcCCEEE-------------EEecccc---C-ccc---CC-CcC
Confidence 9998764 3458899999999887644433222111 1111000 0 000 00 011
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccc-cccCCCCCC-
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPD- 267 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~-~~~~~~~~d- 267 (447)
+++|++.+.. +...++++.|.|++| ...+.+.+++|.++|++||+++|.||+|..+...|.... ...+...++
T Consensus 168 ~~~l~~~~~~---~~k~v~l~~P~NPTG--~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~ 242 (405)
T PRK06207 168 LDQLEEAFKA---GVRVFLFSNPNNPAG--VVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPEN 242 (405)
T ss_pred HHHHHHhhhh---cCeEEEECCCCCCCC--cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCc
Confidence 3667776642 233456777766665 455788999999999999999999999998755443221 111122222
Q ss_pred ee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHHHH
Q 013204 268 LV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAP 342 (447)
Q Consensus 268 ~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~~~ 342 (447)
++ +|||.++-+++++|++++++++++.+... ........+.+++.++.++++.-. -++..+..+++.+
T Consensus 243 vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~ 315 (405)
T PRK06207 243 VITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKL-------QAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRD 315 (405)
T ss_pred EEEEecchhhccCcccceEEEEcCHHHHHHHHHH-------HhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 22 57999873338999999999998888632 111233445566666666664210 1122333444444
Q ss_pred HHHHhHhhccCCCceeeEee-eeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeC-------CEEEEec
Q 013204 343 KFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-------DNIMMSP 413 (447)
Q Consensus 343 ~l~~~L~~l~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g-------~~iR~~~ 413 (447)
.+.+.|+++ +.+..... -|.++++.+..... ....+.+.|+ ++||.+.++. +.+|++
T Consensus 316 ~l~~~L~~~---~~~~~~~p~gg~fl~~~l~~~~~----------~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris- 381 (405)
T PRK06207 316 DLLRVLRGV---EGVFVRAPQAGSYLFPRLPRLAV----------SLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLN- 381 (405)
T ss_pred HHHHHHhcC---CCceecCCCeeEEEEEeCcccCC----------CHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEE-
Confidence 455555443 22222333 35677777653110 1345778886 6899999752 469999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 414 PFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 414 ~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
+..+++++++++++|.+.+++++
T Consensus 382 -~~~~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 382 -FSQDHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred -ecCCHHHHHHHHHHHHHHHHHhh
Confidence 55689999999999999987654
No 118
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.91 E-value=4.1e-22 Score=196.32 Aligned_cols=336 Identities=13% Similarity=0.062 Sum_probs=201.3
Q ss_pred CccccccCCCCCHHHHHHHHHHHhcCCccccc-----CcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHH
Q 013204 40 AGLWCTALGGSEPRLVAAATAQLNTLPFYHSF-----WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKL 114 (447)
Q Consensus 40 ~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~ 114 (447)
.+.+....||++|++++++..+. .....+.. +.+..+...++++++++++. .+.++++++++|+++.+.++..
T Consensus 23 ~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g-~~~~~v~~~~~g~~~~~~~~~~ 100 (398)
T cd00613 23 SFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTG-MDVANASLQDEATAAAEAAGLA 100 (398)
T ss_pred ccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHC-CCccceeccCchHHHHHHHHHH
Confidence 34445567999999998876665 22111221 22334566788888888863 3444788888788777777776
Q ss_pred HHHHHHhcCCC-CcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHH
Q 013204 115 VWYYNNALGRP-NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 193 (447)
Q Consensus 115 ~~~~~~~~~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 193 (447)
++.. + +++.|+ +...+|+.+...+...+... + ..+..+++++.+ ..+++++
T Consensus 101 ~~~~------~~~gd~Vl-~~~~~h~~~~~~~~~~~~~~-----g---~~~~~v~~~~~~-------------~~d~~~l 152 (398)
T cd00613 101 AIRA------YHKRNKVL-VPDSAHPTNPAVARTRGEPL-----G---IEVVEVPSDEGG-------------TVDLEAL 152 (398)
T ss_pred HHhc------ccCCCEEE-EcCccCcchHHHHHHhcccC-----C---cEEEEeccCCCC-------------CcCHHHH
Confidence 6422 2 134555 45668888766655444211 0 011122221110 0113666
Q ss_pred HHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--e
Q 013204 194 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--F 271 (447)
Q Consensus 194 e~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~ 271 (447)
++.+. +++++|++++++ .+|.+. +++++|+++|++||+++|+|++|+.....+.. .. ..+|+++ +
T Consensus 153 ~~~i~----~~t~~viv~~~~-~~G~~~---~~l~~i~~la~~~g~~livD~~~~~~~~~~~~---~~--~~~d~~~~s~ 219 (398)
T cd00613 153 KEEVS----EEVAALMVQYPN-TLGVFE---DLIKEIADIAHSAGALVYVDGDNLNLTGLKPP---GE--YGADIVVGNL 219 (398)
T ss_pred HHhcC----CCeEEEEEECCC-CCceec---chHHHHHHHHHhcCCEEEEEeccccccCCCCh---HH--cCCCEEEeec
Confidence 66553 357888888876 456662 56899999999999999999988632111111 11 2478876 4
Q ss_pred cccC---CCcccceeEEEeChhHHHHhhhccC---------CC-----C------c--cCcCCCCCCcHHHHHHHHHHHH
Q 013204 272 AKAL---SSAYMPIGAILVSPEVSEVIHSQSN---------TL-----G------S--FSHGFTYSGHPVSCAVAIEALK 326 (447)
Q Consensus 272 sK~l---~gg~~~~g~~~~~~~~~~~~~~~~~---------~~-----~------~--~~~~~t~~~~~~~~~aa~a~l~ 326 (447)
+|.+ ++|++++|+++.++++++.+..... .. . . ....++++++++.+.++.++++
T Consensus 220 ~K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~ 299 (398)
T cd00613 220 QKTGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIV 299 (398)
T ss_pred cccCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHH
Confidence 5755 3345789999999888776521100 00 0 0 0112345566677777777676
Q ss_pred HHhhh---cHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEE
Q 013204 327 IYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR 403 (447)
Q Consensus 327 ~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~ 403 (447)
.+..+ +..++.+++++++++.|+++........ .....+.+.+..... .....+.+.|+++|+++.
T Consensus 300 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~~v~~~~~~~~~---------~~~~~~~~~L~~~gi~~~ 368 (398)
T cd00613 300 YLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNG--PFFHEFVLRLPPLYG---------IRAEDLAKALIDGGFHAP 368 (398)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCC--CeeEEEEEEcCCcch---------HHHHHHHHhhhhcCcccc
Confidence 65443 3457888899999999987622111111 111122333322100 024568889999999886
Q ss_pred e----eCCEEEEecCCCCCHHHHHHHHHHH
Q 013204 404 V----SGDNIMMSPPFIMSPEEVDELISKY 429 (447)
Q Consensus 404 ~----~g~~iR~~~~~~~t~e~i~~~~~~l 429 (447)
. ..+.+|++|++.+|++|||++++.|
T Consensus 369 ~~~~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 369 TMYLPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred ccccCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 5 3467999999999999999999864
No 119
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=7.1e-22 Score=192.06 Aligned_cols=326 Identities=16% Similarity=0.168 Sum_probs=206.2
Q ss_pred CCC-EEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHH
Q 013204 31 NGK-KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 109 (447)
Q Consensus 31 dg~-~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~ 109 (447)
.|+ .++++..|. +++| .+|++.+++.+.......+ +.....+|.+.+++.+ ..+++++++++|+++++.
T Consensus 29 ~g~~~~~~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y------~~~~~~~Lr~~ia~~~-~~~~~~I~it~G~~~~l~ 98 (369)
T PRK08153 29 RGRPFRARIGANE--SGFG-PSPSVIAAMREAAAEIWKY------GDPENHDLRHALAAHH-GVAPENIMVGEGIDGLLG 98 (369)
T ss_pred cCCcceeEecCCC--CCCC-CCHHHHHHHHHHHHHhhcC------CCCccHHHHHHHHHHh-CCCHHHEEEcCCHHHHHH
Confidence 344 567887664 4566 6889999998876542211 1122567888888886 346679999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 189 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (447)
.+++... ..++.|++.+|+|.+........+... ..+++.+. .. +
T Consensus 99 ~~~~~~~--------~~gd~vlv~~p~y~~~~~~~~~~g~~~-------------~~vp~~~~------~~--------~ 143 (369)
T PRK08153 99 LIVRLYV--------EPGDPVVTSLGAYPTFNYHVAGFGGRL-------------VTVPYRDD------RE--------D 143 (369)
T ss_pred HHHHHhc--------CCCCEEEECCCcchHHHHHHHHcCCeE-------------EEeeCCCC------CC--------C
Confidence 9888653 335789999999987754333222111 11111000 00 1
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV 269 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v 269 (447)
++++++.+.. .+...+++++|.|++| ...+.+.+.++.++|+ ++++||+||+|..++..+...... ...++++
T Consensus 144 ~~~l~~~~~~--~~~~~i~l~~P~NPtG--~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~~~~~~--~~~~~~i 216 (369)
T PRK08153 144 LDALLDAARR--ENAPLVYLANPDNPMG--SWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAGAAPPID--TDDPNVI 216 (369)
T ss_pred HHHHHHHhcc--cCCcEEEEeCCCCCCC--CCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCcccchhhh--hcCCCEE
Confidence 2444433321 2223345567777774 3457778888888887 499999999999886544221111 1234433
Q ss_pred ---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHH----HHHHHHHH
Q 013204 270 ---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV----EQVNKIAP 342 (447)
Q Consensus 270 ---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~----~~~~~~~~ 342 (447)
+|||.++.+++|+|++++++++++.+... . .+++.+++++.++.++|+ ++++. +.++++.+
T Consensus 217 ~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~-------~--~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~ 284 (369)
T PRK08153 217 RMRTFSKAYGLAGARVGYAIGAPGTIKAFDKV-------R--NHFGMNRIAQAAALAALK---DQAYLAEVVGKIAAARD 284 (369)
T ss_pred EEecchHhccCcchheeeeecCHHHHHHHHHh-------h--cCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHH
Confidence 68999984449999999999999888632 1 245678889888888885 22333 33444444
Q ss_pred HHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEE-ee----CCEEEEecCCCC
Q 013204 343 KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VS----GDNIMMSPPFIM 417 (447)
Q Consensus 343 ~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~-~~----g~~iR~~~~~~~ 417 (447)
.+.+.|++. ++ ...+..+.++.+++..+. ..+..+.++|+++||.+. +. .+.+|++ ..
T Consensus 285 ~~~~~L~~~---g~-~~~p~~~~f~~~~~~~~~----------~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis---~~ 347 (369)
T PRK08153 285 RIAAIARAN---GL-TPLPSATNFVAIDCGRDG----------AFARAVLDGLIARDIFVRMPGVAPLDRCIRVS---CG 347 (369)
T ss_pred HHHHHHHHC---CC-ccCCCcCcEEEEECCCCc----------ccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEe---cC
Confidence 444445443 22 122344556666553211 125678889999999996 32 1469999 34
Q ss_pred CHHHHHHHHHHHHHHHHHHH
Q 013204 418 SPEEVDELISKYGKALKATE 437 (447)
Q Consensus 418 t~e~i~~~~~~l~~~l~~~~ 437 (447)
++++++.++++|++++...+
T Consensus 348 ~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 348 PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred CHHHHHHHHHHHHHHHHHhh
Confidence 89999999999999987654
No 120
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.91 E-value=4.4e-21 Score=187.96 Aligned_cols=339 Identities=16% Similarity=0.125 Sum_probs=208.1
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhhHHHHHH
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQV 112 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGseA~~~Al 112 (447)
.+++|..|.. .++ .++.+.+++.+.+.+....+....+..+....+++.+.+.+. ....+++++++|+++|+..++
T Consensus 25 ~~i~l~~g~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~ 101 (382)
T PRK06108 25 GVLPLWFGES--DLP-TPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAA 101 (382)
T ss_pred CeEEecCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHH
Confidence 5788877643 334 478999999988865432233223345556666666655543 246789999999999999998
Q ss_pred HHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHH
Q 013204 113 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 192 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (447)
+... ..++.|++.+|.|..........+. .. ..++.... .. .+ ..++++
T Consensus 102 ~~l~--------~~gd~vl~~~p~y~~~~~~~~~~g~-~~------------~~v~~~~~------~~---~~-~~d~~~ 150 (382)
T PRK06108 102 QALV--------GPGDEVVAVTPLWPNLVAAPKILGA-RV------------VCVPLDFG------GG---GW-TLDLDR 150 (382)
T ss_pred HHhc--------CCCCEEEEeCCCccchHHHHHHCCC-EE------------EEeeCCCC------CC---Cc-cCCHHH
Confidence 8763 2347799999999766543332221 11 11111000 00 00 011366
Q ss_pred HHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcc-cccc-c-cccCCCCCCee
Q 013204 193 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL-GTMF-G-CDKYSIKPDLV 269 (447)
Q Consensus 193 le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~-g~~~-~-~~~~~~~~d~v 269 (447)
+++.+. ++...+++..|.| .+|. ..+.+.+++|.++|++||+++|+||+|.++... +... . .........++
T Consensus 151 l~~~~~---~~~~~i~l~~p~N-PtG~-~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i 225 (382)
T PRK06108 151 LLAAIT---PRTRALFINSPNN-PTGW-TASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRII 225 (382)
T ss_pred HHHhcC---ccceEEEEECCCC-CCCc-ccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEE
Confidence 666553 2233344445544 4454 457899999999999999999999999977443 1111 1 11111112222
Q ss_pred ---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHHHHHH
Q 013204 270 ---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAPKF 344 (447)
Q Consensus 270 ---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~~~~l 344 (447)
+|||.++.+++|+|++++++++++.+... ....+.+.+++++.++.++|+... -++..++++++.+.+
T Consensus 226 ~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l 298 (382)
T PRK06108 226 FVNSFSKNWAMTGWRLGWLVAPPALGQVLEKL-------IEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHL 298 (382)
T ss_pred EEeechhhccCcccceeeeeCCHHHHHHHHHH-------HHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 68998875448999999999998887632 122345567778877777775321 133456666666777
Q ss_pred HHhHhhccCCCceeeEeeee-eEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEee-------CCEEEEecCC
Q 013204 345 QDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMMSPPF 415 (447)
Q Consensus 345 ~~~L~~l~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------g~~iR~~~~~ 415 (447)
.+.|+++.. +....+.| .++.+.+.... ....+.+.|+ ++||.+.++ .+.+|++...
T Consensus 299 ~~~L~~~~~---~~~~~p~~g~~~~~~l~~~~-----------~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~ 364 (382)
T PRK06108 299 VDALRALPG---VEVAKPDGAMYAFFRIPGVT-----------DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR 364 (382)
T ss_pred HHHHHhCCC---CcccCCCeeEEEEEeCCCCC-----------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC
Confidence 777766522 22223344 44455654321 1345777775 579999764 2569999664
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 013204 416 IMSPEEVDELISKYGKALK 434 (447)
Q Consensus 416 ~~t~e~i~~~~~~l~~~l~ 434 (447)
+++++++++++|.++++
T Consensus 365 --~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 365 --DPARLDEAVERLRRFLA 381 (382)
T ss_pred --CHHHHHHHHHHHHHHHh
Confidence 99999999999988764
No 121
>PLN00175 aminotransferase family protein; Provisional
Probab=99.90 E-value=9.8e-21 Score=186.42 Aligned_cols=339 Identities=12% Similarity=0.061 Sum_probs=207.3
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-cCCCC-eEEEeCChhhHHHH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEANDT 110 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~-~v~~~~sGseA~~~ 110 (447)
...+||..|... +. .++.+.+++.+.+.+....|....+..+....+++.+.+.+. ..+++ ++++++|+++|+..
T Consensus 54 ~~~i~l~~G~P~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~ 130 (413)
T PLN00175 54 HGAINLGQGFPN--FD-GPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAA 130 (413)
T ss_pred CCeEecCCCCCC--CC-CCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHH
Confidence 457888777532 22 467888898888765322222222333444455555544432 12444 69999999999998
Q ss_pred HHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHH
Q 013204 111 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190 (447)
Q Consensus 111 Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (447)
++.... ..++.|++.+|.|..+.......+.... .++.... .+ ..++
T Consensus 131 ~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~g~~~~-------------~v~~~~~-----------~~-~~~~ 177 (413)
T PLN00175 131 TILGLI--------NPGDEVILFAPFYDSYEATLSMAGAKIK-------------TVTLRPP-----------DF-AVPE 177 (413)
T ss_pred HHHHhC--------CCCCEEEEeCCCchhHHHHHHHcCCEEE-------------EEECCcc-----------cC-CCCH
Confidence 888553 3357899999999776544433222111 1111100 00 0013
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccc-cccCCCCCCee
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPDLV 269 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~-~~~~~~~~d~v 269 (447)
++|++.+. + ++++|++.+.++..| .+.+.+.+++|.++|++|++++|.||+|..+...+.... .+..+....++
T Consensus 178 ~~l~~~~~---~-~~k~i~i~~p~NPtG-~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi 252 (413)
T PLN00175 178 DELKAAFT---S-KTRAILINTPHNPTG-KMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTV 252 (413)
T ss_pred HHHHHhcC---c-CceEEEecCCCCCCC-cCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEE
Confidence 66776664 2 344555554444555 456789999999999999999999999987744332211 12222222233
Q ss_pred ---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHHHHHH
Q 013204 270 ---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAPKF 344 (447)
Q Consensus 270 ---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~~~~l 344 (447)
+|||.++..++|+|++++++++++.+... ....+++.+.+.+.++.++|+..+ -++..+.++++.+.+
T Consensus 253 ~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~-------~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l 325 (413)
T PLN00175 253 TMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA-------HSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDIL 325 (413)
T ss_pred EEecchhhccCcchheeeeEeCHHHHHHHHHH-------HhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 58999985449999999999998887632 222356677778887777775311 133455666667777
Q ss_pred HHhHhhccCCCceeeEeeeee-EEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEee----------CCEEEEe
Q 013204 345 QDGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS----------GDNIMMS 412 (447)
Q Consensus 345 ~~~L~~l~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~----------g~~iR~~ 412 (447)
.+.|++. + +....+.|. ++.+.+...... ....+.+.|+ ++||.+.|+ .+.+|++
T Consensus 326 ~~~L~~~---g-~~~~~p~g~~f~~~~~~~~~~~---------~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls 392 (413)
T PLN00175 326 VEGLKEV---G-FKVYPSSGTYFVMVDHTPFGFE---------NDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFA 392 (413)
T ss_pred HHHHHHC---C-CeecCCCeeEEEEEeccccCCC---------CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEE
Confidence 7777664 2 122334444 455554321100 1345777776 569998864 1369999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHH
Q 013204 413 PPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 413 ~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
+..+++++++++++|.+.++
T Consensus 393 --~~~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 393 --FCKDEETLRAAVERMKTKLK 412 (413)
T ss_pred --EcCCHHHHHHHHHHHHHHHh
Confidence 55789999999999998765
No 122
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.90 E-value=3.4e-21 Score=187.67 Aligned_cols=326 Identities=17% Similarity=0.202 Sum_probs=205.2
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 110 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~ 110 (447)
++++++||+++. +++| .+|.+.+++.+.......+ +.....++.+.+++++ +.+++++++++|+++++..
T Consensus 30 ~~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y------~~~~~~~lr~~ia~~~-~~~~~~i~~t~G~~~~l~~ 99 (367)
T PRK02731 30 GIADIIKLASNE--NPLG-PSPKAIEAIRAAADELHRY------PDGSGFELKAALAEKF-GVDPERIILGNGSDEILEL 99 (367)
T ss_pred CCCceEEecCCC--CCCC-CCHHHHHHHHHHHHhhcCC------CCCcHHHHHHHHHHHh-CcCHHHEEEcCCHHHHHHH
Confidence 678899998875 4677 5788999999887653222 2222457888888886 3456789999999998887
Q ss_pred HHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHH
Q 013204 111 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190 (447)
Q Consensus 111 Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (447)
++.... ..++.|++.++.|..+...... .|... ..++..+ +. .++
T Consensus 100 ~~~~l~--------~~gd~vl~~~p~y~~~~~~~~~-~g~~~------------~~~~~~~-~~-------------~~~ 144 (367)
T PRK02731 100 LARAYL--------GPGDEVIYSEHGFAVYPIAAQA-VGAKP------------VEVPAKD-YG-------------HDL 144 (367)
T ss_pred HHHHhc--------CCCCEEEEecCCHHHHHHHHHH-cCCeE------------EEecccC-CC-------------CCH
Confidence 776552 2347899999999766543322 22111 1111100 00 013
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc-ccccccCCCCCCee
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MFGCDKYSIKPDLV 269 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~-~~~~~~~~~~~d~v 269 (447)
+++++.+. + ++.+|+++..++.+|.+. +.+.+.++++.|+ +|+++|+||+|..+...+. .......+..++++
T Consensus 145 ~~l~~~~~---~-~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i 218 (367)
T PRK02731 145 DAMLAAVT---P-RTRLVFIANPNNPTGTYL-PAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVV 218 (367)
T ss_pred HHHHHHhC---C-CCcEEEEeCCCCCCCcCC-CHHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEE
Confidence 66666654 2 344555555555566554 4455555555553 5999999999986644332 11222223334544
Q ss_pred ---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHHH
Q 013204 270 ---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQ 345 (447)
Q Consensus 270 ---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l~ 345 (447)
+|||.++.+++|+|++++++++++.+... . .++..+.+++.++.+.++..+ -++..+..+++.+.++
T Consensus 219 ~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~-------~--~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~ 289 (367)
T PRK02731 219 VTRTFSKAYGLAGLRVGYGIAPPEIIDALNRV-------R--QPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLT 289 (367)
T ss_pred EEeeehHhhcCcccceeeeeCCHHHHHHHHHc-------c--CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 68998874448999999999999888631 1 234556778877777775211 1233445555556666
Q ss_pred HhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-----CEEEEecCCCCCHH
Q 013204 346 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSPE 420 (447)
Q Consensus 346 ~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-----~~iR~~~~~~~t~e 420 (447)
+.|+++ +.. ...+.|.++.+.+.... ....+.++|.++||.+.++. +.+|+++ .+.+
T Consensus 290 ~~L~~~-g~~---~~~~~g~~~~i~~~~~~-----------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~ 351 (367)
T PRK02731 290 EFLAEL-GLE---YIPSVGNFILVDFDDGK-----------DAAEAYQALLKRGVIVRPVAGYGLPNALRITI---GTEE 351 (367)
T ss_pred HHHHHC-CCc---cCCCCceEEEEECCCCC-----------CHHHHHHHHHHCCEEEEeCCCCCCCCeEEEec---CCHH
Confidence 666654 221 12345777777763221 14568889999999999763 4699994 4789
Q ss_pred HHHHHHHHHHHHHH
Q 013204 421 EVDELISKYGKALK 434 (447)
Q Consensus 421 ~i~~~~~~l~~~l~ 434 (447)
++++++++|+++++
T Consensus 352 e~~~l~~aL~~~~~ 365 (367)
T PRK02731 352 ENRRFLAALKEFLA 365 (367)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
No 123
>PRK09148 aminotransferase; Validated
Probab=99.90 E-value=1.9e-20 Score=184.26 Aligned_cols=350 Identities=13% Similarity=0.052 Sum_probs=211.4
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCC-cccccCcCCChHHHHHHHHHHHhcC-cCCCC-eEEEeCChhhH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEA 107 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~-~v~~~~sGseA 107 (447)
.|+.++||..+. ..++ .++.+.+++.+.+.... ..|+...+..+....+++.+.+.+. ...++ +|++++|++++
T Consensus 28 ~~~~~i~l~~~~--p~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 104 (405)
T PRK09148 28 AGADIIDLGMGN--PDLP-TPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG 104 (405)
T ss_pred cCCCeEEcCCCC--CCCC-CCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 467889997663 3344 36788888887764321 1122212233444444444443322 13455 79999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
+..+++... ..++.|++.+|+|.+........+. .. ..++.... .. +
T Consensus 105 l~~~~~~l~--------~~gd~Vl~~~P~y~~~~~~~~~~g~-~v------------~~v~~~~~------~~----~-- 151 (405)
T PRK09148 105 FANMAQAIT--------APGDVILCPNPSYPIHAFGFIMAGG-VI------------RSVPAEPD------EE----F-- 151 (405)
T ss_pred HHHHHHHhc--------CCCCEEEEcCCCCcccHHHHHhcCC-EE------------EEEeCCCC------CC----C--
Confidence 999988764 3357899999999887544433221 11 11111000 00 0
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccc-cccCCCCC
Q 013204 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKP 266 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~-~~~~~~~~ 266 (447)
.+++++.+....++...++++.|.|++| ...+.+.+++|.++|++||+++|+||+|..+...+.... .....-.+
T Consensus 152 --~~~l~~~~~~~~~~~~~v~l~~P~NPtG--~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~ 227 (405)
T PRK09148 152 --FPALERAVRHSIPKPIALIVNYPSNPTA--YVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAK 227 (405)
T ss_pred --ccCHHHHHhhccccceEEEEeCCCCCCC--cCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCcc
Confidence 1445555554334445566666666665 556889999999999999999999999987743332211 11111112
Q ss_pred C----eeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHH
Q 013204 267 D----LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKI 340 (447)
Q Consensus 267 d----~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~ 340 (447)
+ +-+|||.++..++++|++++++++++.+... ....+++.+.+++.++.+.|+.-+ -+...+.++++
T Consensus 228 ~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~-------~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~ 300 (405)
T PRK09148 228 DVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRV-------KSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKR 300 (405)
T ss_pred CcEEEEeccccccCCcchheeeeeCCHHHHHHHHHH-------HHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 2 2368999884449999999999998888632 122244556667777766665211 12234555666
Q ss_pred HHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeC-------CEEEEe
Q 013204 341 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-------DNIMMS 412 (447)
Q Consensus 341 ~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g-------~~iR~~ 412 (447)
.+.+.+.|+++ ++.......|.++.+.++...... ....+.+.++ ++||.+.++. +.+|++
T Consensus 301 r~~l~~~L~~~---~~~~~~p~~g~f~~~~l~~~~~~~--------~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~ 369 (405)
T PRK09148 301 RDVLVESFGRA---GWDIPPPAASMFAWAPIPEAFRHL--------GSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIA 369 (405)
T ss_pred HHHHHHHHHHc---CCccCCCCeeEEEEEECCCccCCC--------CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEE
Confidence 66666666654 221111233556666664321100 1234666665 6899999751 469999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 013204 413 PPFIMSPEEVDELISKYGKALKATEERV 440 (447)
Q Consensus 413 ~~~~~t~e~i~~~~~~l~~~l~~~~~~~ 440 (447)
. ..+++++++++++|.+.+.+..+..
T Consensus 370 ~--~~~~~~l~~al~~l~~~l~~~~~~~ 395 (405)
T PRK09148 370 L--VENEQRIRQAARNIKRFLSSADETL 395 (405)
T ss_pred e--cCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 5789999999999999998776543
No 124
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=2.1e-21 Score=188.50 Aligned_cols=320 Identities=13% Similarity=0.101 Sum_probs=199.4
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 112 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al 112 (447)
..++||+++. +++| .+|.+.+++.+.++...++ +.....++.+.+++.+ ..+++++++++|+++++..++
T Consensus 29 ~~~i~l~~n~--~~~~-~~~~v~~a~~~~~~~~~~~------p~~g~~~lr~~ia~~~-~~~~~~i~~t~G~~~~l~~~~ 98 (359)
T PRK03158 29 EKIVKLASNE--NPYG-PSPKVKEAIAAHLDELALY------PDGYAPELRTKVAKHL-GVDEEQLLFGAGLDEVIQMIS 98 (359)
T ss_pred CceEEecCCC--CCCC-CCHHHHHHHHHHHHHhhcC------CCCcHHHHHHHHHHHh-CCCHHHEEECCCHHHHHHHHH
Confidence 3789998775 4577 5889999999887653221 2334567778888876 345679999999999998888
Q ss_pred HHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHH
Q 013204 113 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 192 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (447)
+... ..++.|++.+|+|++........ |... ..+++.+ +. .++++
T Consensus 99 ~~~~--------~~gd~v~~~~p~y~~~~~~~~~~-g~~~------------~~~~~~~-~~-------------~d~~~ 143 (359)
T PRK03158 99 RALL--------NPGTNTVMAEPTFSQYRHNAIIE-GAEV------------REVPLKD-GG-------------HDLEA 143 (359)
T ss_pred HHHh--------CCCCEEEEcCCCHHHHHHHHHHc-CCeE------------EEEecCC-CC-------------cCHHH
Confidence 7653 33478999999998875443322 2111 1111110 00 01355
Q ss_pred HHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc-ccccccCCCCCC-ee-
Q 013204 193 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MFGCDKYSIKPD-LV- 269 (447)
Q Consensus 193 le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~-~~~~~~~~~~~d-~v- 269 (447)
+++.+. + ++++++++..++.+|.+. +.+.+.++++.|+ +|+++|+||+|..|...+. .......+-.+. ++
T Consensus 144 l~~~~~---~-~~~~v~i~~p~NPtG~~~-~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~ 217 (359)
T PRK03158 144 MLKAID---E-QTKIVWICNPNNPTGTYV-NHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVL 217 (359)
T ss_pred HHHhcC---C-CCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEE
Confidence 555443 2 344455444455666555 4455555665553 6999999999987633221 111111111122 22
Q ss_pred -eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHHHHh
Q 013204 270 -SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDG 347 (447)
Q Consensus 270 -~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l~~~ 347 (447)
+|||.++.+++|+|++++++++++.+... . .++..+++++.++.++++.-. .+...+..+++.+.+.+.
T Consensus 218 ~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~-------~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 288 (359)
T PRK03158 218 RTFSKAYGLAALRVGYGIASEELIEKLNIA-------R--PPFNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAF 288 (359)
T ss_pred EechHhhcCcchhhehhcCCHHHHHHHHHh-------c--CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 68999985348999999999999888632 1 245678888888888875211 112223333444444444
Q ss_pred HhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-----CCEEEEecCCCCCHHHH
Q 013204 348 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPEEV 422 (447)
Q Consensus 348 L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----g~~iR~~~~~~~t~e~i 422 (447)
|++. + +...++.|.++.+.+... ...+.+.|+++||.+.++ .+.+|++ ..+++++
T Consensus 289 l~~~---~-~~~~~~~g~~i~~~~~~~-------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~---~~~~~~~ 348 (359)
T PRK03158 289 CKEY---G-LFYYPSQTNFIFVDTGRD-------------ANELFEALLKKGYIVRSGAALGFPTGVRIT---IGLKEQN 348 (359)
T ss_pred HHHC---C-CeeCCCcCcEEEEECCCC-------------HHHHHHHHHHCCeEEeeCCCCCCCCeEEEe---cCCHHHH
Confidence 4443 2 222345577776665311 345788899999999985 2579999 4589999
Q ss_pred HHHHHHHHHH
Q 013204 423 DELISKYGKA 432 (447)
Q Consensus 423 ~~~~~~l~~~ 432 (447)
++++++|+++
T Consensus 349 ~~l~~al~~~ 358 (359)
T PRK03158 349 DKIIELLKEL 358 (359)
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 125
>PRK08960 hypothetical protein; Provisional
Probab=99.90 E-value=2.4e-20 Score=182.73 Aligned_cols=339 Identities=12% Similarity=0.089 Sum_probs=206.1
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhhHHHH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDT 110 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGseA~~~ 110 (447)
|..++++..+.. +++ .++.+.+++.+.+......+....+..+....+++.+.+.+. ...++++++++|+++|+..
T Consensus 31 ~~~~i~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 107 (387)
T PRK08960 31 GHDVIHLEIGEP--DFT-TAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLL 107 (387)
T ss_pred CCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHH
Confidence 556788876643 333 478999999988864322222112233334444444443321 2467899999999999999
Q ss_pred HHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHH
Q 013204 111 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190 (447)
Q Consensus 111 Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (447)
++.+.. .+++.|++.+|.|..........+.. . ..+++.....+. .++
T Consensus 108 ~~~~~~--------~~gd~vlv~~p~y~~~~~~~~~~g~~-~------------~~v~~~~~~~~~-----------~d~ 155 (387)
T PRK08960 108 ASSLLV--------DPGKHWLLADPGYPCNRHFLRLVEGA-A------------QLVPVGPDSRYQ-----------LTP 155 (387)
T ss_pred HHHHhc--------CCCCEEEEcCCCCcchHHHHHhcCCe-E------------EEEecCcccCCC-----------CCH
Confidence 988663 34578999999998875444332211 1 111111100000 013
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee-
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV- 269 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v- 269 (447)
+++++.+. ++...++++.|.|++| ...+.+.+++|+++|++||+++|+||+|.++...+... ......++++
T Consensus 156 ~~l~~~~~---~~~~~i~i~~p~NPtG--~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~--~~~~~~~~vi~ 228 (387)
T PRK08960 156 ALVERHWN---ADTVGALVASPANPTG--TLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA--SVLEVDDDAFV 228 (387)
T ss_pred HHHHHHhC---ccceEEEEECCCCCCC--cCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC--ChhhccCCEEE
Confidence 56666554 3445667777766665 45578899999999999999999999998774332211 1223345655
Q ss_pred --eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHH-h--hhcHHHHHHHHHHHH
Q 013204 270 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY-K--ERNIVEQVNKIAPKF 344 (447)
Q Consensus 270 --~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~-~--~~~~~~~~~~~~~~l 344 (447)
+|||.++.+++|+|++++++++++.+... ....+.+.+.+++.++.++++.- . -.+..+.++++.+.+
T Consensus 229 ~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~-------~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l 301 (387)
T PRK08960 229 LNSFSKYFGMTGWRLGWLVAPPAAVPELEKL-------AQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFL 301 (387)
T ss_pred EeecccccCCcccEEEEEEcCHHHHHHHHHH-------HhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHH
Confidence 48999875449999999999998877531 22234455677777777766420 0 112334455555556
Q ss_pred HHhHhhccCCCceeeE-eeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEee--------CCEEEEecC
Q 013204 345 QDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS--------GDNIMMSPP 414 (447)
Q Consensus 345 ~~~L~~l~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~--------g~~iR~~~~ 414 (447)
.+.|++. +..... ..-|.++.+++..... ....+.+.|+ ++||.+.++ ++.+|++..
T Consensus 302 ~~~L~~~---~~~~~~~p~g~~f~~~~~~~~~~----------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~ 368 (387)
T PRK08960 302 LPALREL---GFGIAVEPQGAFYLYADISAFGG----------DAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYT 368 (387)
T ss_pred HHHHHhc---CCcCCcCCCeeEEEEEeccccCC----------CHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEec
Confidence 6666553 221112 2235566666653110 1345777765 689999875 247999944
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 013204 415 FIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 415 ~~~t~e~i~~~~~~l~~~l~ 434 (447)
.+.+.+.+++++|.+++.
T Consensus 369 --~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 369 --QSLPRLQEAVERIARGLR 386 (387)
T ss_pred --CCHHHHHHHHHHHHHHHh
Confidence 578888888888877654
No 126
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.6e-20 Score=184.78 Aligned_cols=337 Identities=11% Similarity=0.044 Sum_probs=204.6
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcc-cccCcCCChHHHHHHHHHHHhcC-cCCC-CeEEEeCChhhH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWNRTTKPSLDLAKELLEMFT-ASKM-AKVFFTNSGSEA 107 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~-~~~~-~~v~~~~sGseA 107 (447)
.|..++||..+. ..++ .++.+.+++.+.+.+...+ +. ..+..+....+++.+.+.+. ...+ ++|++++|+++|
T Consensus 30 ~~~~~i~l~~g~--p~~~-~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 105 (399)
T PRK07681 30 AGHKMIDLSIGN--PDMP-PADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDG 105 (399)
T ss_pred cCCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHH
Confidence 467889998774 3344 4778888888877542221 11 12333444455555544322 2355 689999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
+..+++... ..++.|++.+|+|.+........+.... .++...... + .
T Consensus 106 l~~~~~~~~--------~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~-------------~v~~~~~~~----------~-~ 153 (399)
T PRK07681 106 LVHLPMVYA--------NPGDIILVPDPGYTAYETGIQMAGATSY-------------YMPLKKEND----------F-L 153 (399)
T ss_pred HHHHHHHhC--------CCCCEEEECCCCccchHHHHHhcCCEEE-------------EEecCCCCC----------C-c
Confidence 999888663 3347899999999887655444332211 111100000 0 0
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-c-cccCCCC
Q 013204 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G-CDKYSIK 265 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~-~~~~~~~ 265 (447)
.+++++++.+. ++...++++.|.|++| ...+.+.+++|.++|++||+++|.||+|..+...+... . .+..+..
T Consensus 154 ~d~~~l~~~~~---~~~k~v~l~~P~NPTG--~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~ 228 (399)
T PRK07681 154 PDLELIPEEIA---DKAKMMILNFPGNPVP--AMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAK 228 (399)
T ss_pred CCHHHHHHhcc---ccceEEEEeCCCCCcC--cCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCc
Confidence 01355555443 2233344444766665 55688999999999999999999999999774333221 1 1111111
Q ss_pred CC---eeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHH
Q 013204 266 PD---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKI 340 (447)
Q Consensus 266 ~d---~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~ 340 (447)
.. +-+|||.++.+++++|++++++++++.+... ....+++.+.+++.++.++++... -++..+.++++
T Consensus 229 ~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~-------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 301 (399)
T PRK07681 229 EVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQF-------KSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQER 301 (399)
T ss_pred ccEEEEeecccccCCccceeEEEecCHHHHHHHHHH-------HhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 11 2368999974448999999999998888632 122345566677777777665211 12223444555
Q ss_pred HHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHH-cCceEEeeC-------CEEEEe
Q 013204 341 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVSG-------DNIMMS 412 (447)
Q Consensus 341 ~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~g-------~~iR~~ 412 (447)
.+.+.+.|++. ++.......|.++.+.+.... ....+.+.+++ +||.+.++. +.+|++
T Consensus 302 ~~~l~~~L~~~---g~~~~~p~~g~f~~~~l~~~~-----------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis 367 (399)
T PRK07681 302 RDTLVDGFRTF---GWNVDKPAGSMFVWAEIPKGW-----------TSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIA 367 (399)
T ss_pred HHHHHHHHHHC---CCcccCCCeeeEEEEECCCCC-----------CHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEE
Confidence 55666666554 221111233666677665321 13457777776 899998751 469999
Q ss_pred cCCCCCHHHHHHHHHHHHH
Q 013204 413 PPFIMSPEEVDELISKYGK 431 (447)
Q Consensus 413 ~~~~~t~e~i~~~~~~l~~ 431 (447)
+..+++++++++++|++
T Consensus 368 --~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 368 --LVQDEEVLQQAVENIRN 384 (399)
T ss_pred --ecCCHHHHHHHHHHHHH
Confidence 55788999999999988
No 127
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.90 E-value=3e-20 Score=182.14 Aligned_cols=342 Identities=16% Similarity=0.191 Sum_probs=205.5
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc-C-CCCeEEEeCChhhHHHH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-S-KMAKVFFTNSGSEANDT 110 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~-~~~~v~~~~sGseA~~~ 110 (447)
..++||..+.. .++ .++.+.+++.+.+......+....+..+....+++.+...+.. . ..++|++++|+++|+..
T Consensus 30 ~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~ 106 (391)
T PRK07309 30 PGILKLTLGEP--DFT-TPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSA 106 (391)
T ss_pred CCeEEcCCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 56899987753 455 3678888988877643222221122233333444444333211 1 23689999999999999
Q ss_pred HHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHH
Q 013204 111 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190 (447)
Q Consensus 111 Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (447)
+++... .+++.|++.+|+|.++....... |... ..++.... .+ ..+.
T Consensus 107 ~~~~~~--------~~gd~vl~~~p~y~~~~~~~~~~-g~~~------------~~~~~~~~-----------~~-~~d~ 153 (391)
T PRK07309 107 SLTAIL--------EPGDKVLLPAPAYPGYEPIVNLV-GAEI------------VEIDTTEN-----------DF-VLTP 153 (391)
T ss_pred HHHHhc--------CCCCEEEEeCCCCcchHHHHHHc-CCEE------------EEEecCCc-----------CC-cCCH
Confidence 988653 33578999999998875433322 2111 11111000 00 0113
Q ss_pred HHHHHHHHhhCCCcEEEEEEc-cccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-ccccCCCCCC-
Q 013204 191 NNLEDLILKEGPETIAAFIAE-PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYSIKPD- 267 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~e-pv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~~~~~~~~~d- 267 (447)
+++++.+.... +++++|++. |.|++| ...+.+.+++|.++|++||+++|+||+|..+...+... .... ..++
T Consensus 154 ~~l~~~~~~~~-~~~~~i~l~~P~NPtG--~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~--~~~~~ 228 (391)
T PRK07309 154 EMLEKAILEQG-DKLKAVILNYPANPTG--VTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAE--YLPDQ 228 (391)
T ss_pred HHHHHHhhccC-CCeEEEEEECCCCCCC--cCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHH--hccCC
Confidence 67777765322 245555555 655554 55677889999999999999999999999774434221 1111 1122
Q ss_pred ee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHHHH
Q 013204 268 LV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAP 342 (447)
Q Consensus 268 ~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~~~ 342 (447)
++ +|||.++..++++|++++++++++.+... ......+.+++++.++.+.++... .....+.++++.+
T Consensus 229 ~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 301 (391)
T PRK07309 229 TILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKS-------HQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRD 301 (391)
T ss_pred EEEEecChhhccCccceeEEEEeCHHHHHHHHHH-------HhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Confidence 22 58999874449999999999998888632 112233556677777777665311 1233455666666
Q ss_pred HHHHhHhhccCCCceeeEeeee-eEEEEEeecCCCCCCCCCCCcchHHHHHHH-HHHcCceEEeeC-------CEEEEec
Q 013204 343 KFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVSG-------DNIMMSP 413 (447)
Q Consensus 343 ~l~~~L~~l~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~g-------~~iR~~~ 413 (447)
.+.+.|++. ++ ....+.| .++.+.++..... ....+.++ +.++||.+.++. +.+|++
T Consensus 302 ~~~~~l~~~---~~-~~~~p~gg~~~~~~l~~~~~~---------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~- 367 (391)
T PRK07309 302 YIIEKMTDL---GF-KIIKPDGAFYIFAKIPAGYNQ---------DSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLS- 367 (391)
T ss_pred HHHHHHHHC---CC-eecCCCeeEEEEEECCCCCCC---------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEE-
Confidence 676766654 22 2223333 4445555432110 12346655 557899998652 479999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 414 PFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 414 ~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
+..+.+++++++++|.+++++++
T Consensus 368 -~~~~~~~l~~~i~~l~~~~~~~~ 390 (391)
T PRK07309 368 -YAASMETIKEAMKRLKEYMEEHA 390 (391)
T ss_pred -ecCCHHHHHHHHHHHHHHHHhhc
Confidence 44688999999999999887653
No 128
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.89 E-value=1.4e-20 Score=184.45 Aligned_cols=341 Identities=11% Similarity=0.088 Sum_probs=198.8
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCC-cccccCcCCChHHHHHHHHHHHhcC-cCCCC-eEEEeCChhhH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEA 107 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~-~v~~~~sGseA 107 (447)
+|+.++||..+. ..++ .++.+.+++.+.+.... ..+....+..+....+++.+.+.+. ...++ +|++++|+.+|
T Consensus 28 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~a 104 (388)
T PRK07366 28 AGKELIDLSLGS--SDLP-APAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEG 104 (388)
T ss_pred cCCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHH
Confidence 577889997774 3455 47889999988775321 1122112233344444444443322 24566 69999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
+..+++... ..++.|++.+|+|.+........+.... .++..... . + .
T Consensus 105 l~~~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~g~~~~-------------~v~~~~~~------~----~-~ 152 (388)
T PRK07366 105 TAHLPLAVL--------NPGDFALLLDPGYPSHAGGVYLAGGQIY-------------PMPLRAEN------D----F-L 152 (388)
T ss_pred HHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHhcCCEEE-------------EEECCCcc------C----C-C
Confidence 999988653 3457899999999888655444332211 11110000 0 0 0
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccc-c-ccccCCCC
Q 013204 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-F-GCDKYSIK 265 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~-~-~~~~~~~~ 265 (447)
.+++++++.+. ++..+++++.|.|++| ...+.+.+++|.++|++||+++|.||+|..|...+.. . ......-.
T Consensus 153 ~d~~~l~~~~~---~~~k~i~l~~p~NPTG--~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 227 (388)
T PRK07366 153 PVFADIPTEVL---AQARLMVLSYPHNPTT--AIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPE 227 (388)
T ss_pred CCHHHHHHhhc---ccceEEEEeCCCCCCC--ccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCC
Confidence 00244444332 2233455555555555 4568899999999999999999999999987544321 1 11111111
Q ss_pred -CCee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHH
Q 013204 266 -PDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNK 339 (447)
Q Consensus 266 -~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~ 339 (447)
+.++ +|||.++.+++++|++++++++++.+.... ....++..+..+.++.+++..-. -++..+.+++
T Consensus 228 ~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~~-------~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~ 300 (388)
T PRK07366 228 KSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQVK-------AVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQ 300 (388)
T ss_pred cccEEEEeecccccCCcchhheehcCCHHHHHHHHHHH-------hhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 2222 689999754499999999999988886421 11122222222333444443100 1233455556
Q ss_pred HHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHH-HHcCceEEee---C----CEEEE
Q 013204 340 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVS---G----DNIMM 411 (447)
Q Consensus 340 ~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~---g----~~iR~ 411 (447)
+.+.+.+.|+++ ++....+..|.++.+.+...... ....+.+.+ .++||.+.++ + +.+|+
T Consensus 301 ~r~~l~~~L~~~---~~~~~~p~~g~f~~~~~~~~~~~---------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi 368 (388)
T PRK07366 301 RRDAFINALHQI---GWPVPLPEATMYVWAKLPEPWQG---------NSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRF 368 (388)
T ss_pred HHHHHHHHHHHC---CCcccCCCeeEEEEEECCcccCC---------CHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEE
Confidence 666666666654 22112234466777776532100 023466666 5679999875 1 46999
Q ss_pred ecCCCCCHHHHHHHHHHHHHH
Q 013204 412 SPPFIMSPEEVDELISKYGKA 432 (447)
Q Consensus 412 ~~~~~~t~e~i~~~~~~l~~~ 432 (447)
+ +..+++++++++++|.+.
T Consensus 369 ~--~~~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 369 A--LVHDPDILEEAVERIAAF 387 (388)
T ss_pred E--ecCCHHHHHHHHHHHHHh
Confidence 9 557899999999999865
No 129
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.89 E-value=1.5e-20 Score=185.07 Aligned_cols=338 Identities=14% Similarity=0.121 Sum_probs=208.2
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcc-cccC--c--CCChHHHHHHHHHHHhcCcCCCCeEEEeCChhh
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFW--N--RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 106 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~--~--~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGse 106 (447)
+..|||..+. |.-++.+.+++.+.+...... +... . ...+...++.+.+++++...+.++|+|++|+++
T Consensus 16 ~~iyld~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~ 89 (398)
T TIGR03392 16 GTVYLDSAAT------ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTE 89 (398)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHH
Confidence 5689997544 456789999998887542211 1000 0 012334567778888874334679999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchh---hhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChh
Q 013204 107 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL---IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 183 (447)
Q Consensus 107 A~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (447)
++..++...... ...++++||+.++.|++... ......|... ..++.+..+.
T Consensus 90 ~l~~~~~~~~~~----~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v------------~~v~~~~~~~--------- 144 (398)
T TIGR03392 90 SINLVAQSYARP----RLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKV------------VKLPIGADLL--------- 144 (398)
T ss_pred HHHHHHHHhhhc----cCCCCCEEEECCcchhHHHHHHHHHHHHcCcEE------------EEEecCCCCC---------
Confidence 999998865210 00234688888888876421 1111122111 1111111000
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCC
Q 013204 184 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS 263 (447)
Q Consensus 184 ~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~ 263 (447)
.+++++++.+. +++++|++..+++..|.+.+ +++|.++|++||+++++|++|+ +|.. . .....
T Consensus 145 ----~~~~~l~~~i~----~~t~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~~--~--~~~~~ 207 (398)
T TIGR03392 145 ----PDIRQLPELLT----PRTRILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQG-VVHG--P--PDVQA 207 (398)
T ss_pred ----cCHHHHHHHhc----cCceEEEEECccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCC--C--CChhh
Confidence 01366777664 24567777777777888876 8999999999999999999996 3322 1 12223
Q ss_pred CCCCeeeec--ccCCCcccceeEEEeChhHHHHhhhccCC-----------------CCccCcCCCCCCcHHHHHHHHHH
Q 013204 264 IKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNT-----------------LGSFSHGFTYSGHPVSCAVAIEA 324 (447)
Q Consensus 264 ~~~d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~t~~~~~~~~~aa~a~ 324 (447)
..+|+.++| |.++ + .++|+++.++++++.+...... +..+. ..+.+..++++..++
T Consensus 208 ~~~d~~~~s~~K~~g-p-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e---~GT~~~~~~~a~~~a 282 (398)
T TIGR03392 208 LDIDFYAFSGHKLYG-P-TGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFE---AGTPNIAGVIGLSAA 282 (398)
T ss_pred cCCCEEEEecccccC-C-CceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhcc---CCCCCHHHHHHHHHH
Confidence 457998888 9554 3 4689999999987766421000 00011 113455566666677
Q ss_pred HHHHhhh---cHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCce
Q 013204 325 LKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGML 401 (447)
Q Consensus 325 l~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 401 (447)
++.+.+. +..++..++.+++++.|+++....+.. ...+.++.+.+.... ...+.+.|.++||.
T Consensus 283 l~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~--~~~~~i~~~~~~~~~------------~~~l~~~L~~~gI~ 348 (398)
T TIGR03392 283 LEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFR--CPGSSLLAFDFAGVH------------HSDLAALLAESGIA 348 (398)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC--CCCCcEEEEEeCCcC------------HHHHHHHHHhCCEE
Confidence 7766543 344566666777777776652221111 112334444443211 34577888999999
Q ss_pred EEee-------------CCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 402 VRVS-------------GDNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 402 ~~~~-------------g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
++.+ ++.+|++++..+|++||+++++.|+++++++
T Consensus 349 v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 349 LRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred EecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 8754 2479999999999999999999999988764
No 130
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.89 E-value=2.3e-20 Score=183.49 Aligned_cols=347 Identities=14% Similarity=0.102 Sum_probs=206.0
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhhHHHH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDT 110 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGseA~~~ 110 (447)
+...+||..+.. .+. .+|++.+++.+.+.+....+....+.......+++.+.+.+. ....+++++++|+++|+..
T Consensus 30 ~~~~~~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 106 (393)
T PRK05764 30 GRDVISLGAGEP--DFD-TPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYN 106 (393)
T ss_pred cCCEEEeCCCCC--CCC-CCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHH
Confidence 557899988753 233 578999999888765322222112223333344444433322 2355789999999999999
Q ss_pred HHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHH
Q 013204 111 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190 (447)
Q Consensus 111 Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (447)
++..+. ..++.|++.++.|.+........ |... ..++...... + ..++
T Consensus 107 ~~~~~~--------~~gd~vl~~~p~y~~~~~~~~~~-g~~~------------~~~~~~~~~~----------~-~~d~ 154 (393)
T PRK05764 107 AFMALL--------DPGDEVIIPAPYWVSYPEMVKLA-GGVP------------VFVPTGEENG----------F-KLTV 154 (393)
T ss_pred HHHHhc--------CCCCEEEecCCCCcchHHHHHHc-CCEE------------EEEecCcccC----------C-cCCH
Confidence 888653 33478999999998765443332 2111 1111100000 0 0012
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-cc-cc-CCCCC-
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC-DK-YSIKP- 266 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~~-~~-~~~~~- 266 (447)
+++++.+. ++...++++.|.|++ | ...+.+.+++|.++|++||+++|+||+|..+...+..+ .. .. .+...
T Consensus 155 ~~l~~~l~---~~~~~v~~~~p~NPt-G-~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 229 (393)
T PRK05764 155 EQLEAAIT---PKTKALILNSPSNPT-G-AVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDR 229 (393)
T ss_pred HHHHHhhC---ccceEEEEECCCCCC-C-cccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCC
Confidence 56666653 233345566665554 4 44567889999999999999999999998764333221 11 11 12222
Q ss_pred Cee--eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHHHH
Q 013204 267 DLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAP 342 (447)
Q Consensus 267 d~v--~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~~~ 342 (447)
+++ +|||.++..++++|++++++++++.+... ....+...+++++.++.+.++... -+++.+.++++.+
T Consensus 230 ~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 302 (393)
T PRK05764 230 TITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKL-------QSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRD 302 (393)
T ss_pred EEEEecCcccccCccceeEEEecCHHHHHHHHHH-------HhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 222 58999884448999999999998887632 112344567777777777765101 1234455555566
Q ss_pred HHHHhHhhccCCCceeeEeeee-eEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeC-----CEEEEecCC
Q 013204 343 KFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-----DNIMMSPPF 415 (447)
Q Consensus 343 ~l~~~L~~l~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g-----~~iR~~~~~ 415 (447)
.+++.|+++.+.. ...+.| .++.+.+....... . .....+.+.++ ++||.+.++. +.+|++ +
T Consensus 303 ~l~~~L~~~~g~~---~~~~~g~~~~~~~~~~~~~~~-~-----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis--~ 371 (393)
T PRK05764 303 LMVDGLNEIPGLE---CPKPEGAFYVFPNVSKLLGKS-I-----TDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLS--Y 371 (393)
T ss_pred HHHHHHhhCCCCc---ccCCCcceEEEEecccccccc-c-----CCHHHHHHHHHHhCCEEEccccccCCCCEEEEE--e
Confidence 6666666542222 223444 34455554321100 0 01245666665 5799988752 579999 6
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 013204 416 IMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 416 ~~t~e~i~~~~~~l~~~l~~~ 436 (447)
.++++++++++++|.+++++.
T Consensus 372 ~~~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 372 ATSLEDLEEGLERIERFLESL 392 (393)
T ss_pred cCCHHHHHHHHHHHHHHHHhh
Confidence 679999999999999988754
No 131
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.89 E-value=6.1e-21 Score=184.36 Aligned_cols=317 Identities=15% Similarity=0.185 Sum_probs=198.2
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 112 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al 112 (447)
.+.+||++|. ++++ .+|++++++.++......+ +.....++.+.+++++. .+.+++++++|+++++..++
T Consensus 19 ~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y------~~~~~~~lr~~ia~~~~-~~~~~i~~~~G~~~~l~~~~ 88 (346)
T TIGR01141 19 KEVIKLNSNE--NPFG-PPPKAKEALRAEADKLHRY------PDPDPAELKQALADYYG-VDPEQILLGNGSDEIIELLI 88 (346)
T ss_pred CceEEccCCC--CCCC-CCHHHHHHHHHhHHHhhcC------CCCCHHHHHHHHHHHhC-cChHHEEEcCCHHHHHHHHH
Confidence 4799998775 3566 5899999999886532211 12223678888888874 45678999999999998888
Q ss_pred HHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHH
Q 013204 113 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 192 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (447)
+.+. .++++|++.++.|..+...... .|... ..++....+ ..+++.
T Consensus 89 ~~l~--------~~gd~v~~~~p~y~~~~~~~~~-~g~~~------------~~~~~~~~~-------------~~d~~~ 134 (346)
T TIGR01141 89 RAFL--------EPGDAVLVPPPTYSMYEISAKI-HGAEV------------VKVPLDEDG-------------QLDLED 134 (346)
T ss_pred HHhc--------CCCCEEEEcCCCHHHHHHHHHH-cCCeE------------EEeccCCCC-------------CCCHHH
Confidence 7653 2347899989988544322222 12111 111111100 011355
Q ss_pred HHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee---
Q 013204 193 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--- 269 (447)
Q Consensus 193 le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v--- 269 (447)
+++.+. +.+++|+++..++.+|.+.+ .+.+.++++.|+ +++++|+||+|.++...+... ......++++
T Consensus 135 l~~~~~----~~~~~v~l~~p~NptG~~~~-~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~~~--~~~~~~~~~i~~~ 206 (346)
T TIGR01141 135 ILVAID----DKPKLVFLCSPNNPTGNLLS-RSDIEAVLERTP-EDALVVVDEAYGEFSGEPSTL--PLLAEYPNLIVLR 206 (346)
T ss_pred HHHhcC----CCCCEEEEeCCCCCCCCCCC-HHHHHHHHHhCC-CCcEEEEECchhhhcCCccHH--HHHhhCCCEEEEe
Confidence 665432 24555565555566665554 444555555544 599999999998764322111 1111223444
Q ss_pred eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHHHHhH
Q 013204 270 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGV 348 (447)
Q Consensus 270 ~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l~~~L 348 (447)
++||.++.+++++|++++++++++.+... ..+++.+++++.++.+.++... -.+..++++++.+++++.|
T Consensus 207 S~sK~~g~~G~r~G~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L 277 (346)
T TIGR01141 207 TLSKAFGLAGLRIGYAIANAEIIDALNKV---------RAPFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGL 277 (346)
T ss_pred hhhHhhhchhhhceeeecCHHHHHHHHhc---------cCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899965448999999999998888631 1245567788887777765432 2334566667777777777
Q ss_pred hhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC------CEEEEecCCCCCHHHH
Q 013204 349 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------DNIMMSPPFIMSPEEV 422 (447)
Q Consensus 349 ~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g------~~iR~~~~~~~t~e~i 422 (447)
+++.+. ......|.++.+.+.. . ...+.++|.++||.+.++. +.+|+++ .+++++
T Consensus 278 ~~~~g~---~~~~~~g~~~~~~~~~-~------------~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~---~~~~~i 338 (346)
T TIGR01141 278 KKLPGL---EVYPSDANFVLIRFPR-D------------ADALFEALLEKGIIVRDLNSYPGLPNCLRITV---GTREEN 338 (346)
T ss_pred HhcCCC---EECCCcCCEEEEecCC-C------------HHHHHHHHHHCCeEEEeCCCcCCCCCeEEEec---CCHHHH
Confidence 665222 2223346666666653 1 3468889999999998763 5699994 389999
Q ss_pred HHHHHHH
Q 013204 423 DELISKY 429 (447)
Q Consensus 423 ~~~~~~l 429 (447)
+++++.|
T Consensus 339 ~~~~~~l 345 (346)
T TIGR01141 339 DRFLAAL 345 (346)
T ss_pred HHHHHHh
Confidence 9999876
No 132
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.89 E-value=2.1e-20 Score=182.84 Aligned_cols=335 Identities=16% Similarity=0.184 Sum_probs=200.9
Q ss_pred EEecCCccccccCCCCCHHHHHHHHHHHhcCCcc-cccCc---CCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHH
Q 013204 35 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWN---RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 110 (447)
Q Consensus 35 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~~---~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~ 110 (447)
|||..+. +..++.+++++.+.+.....+ +.... ...+...++.+.+++++. .+.++++|++||++++..
T Consensus 2 yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g-~~~~~i~~t~~~t~a~~~ 74 (379)
T TIGR03402 2 YLDNNAT------TRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLG-AEPDEIIFTSGGTESDNT 74 (379)
T ss_pred cCCCcCC------CCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEeCcHHHHHHH
Confidence 6776544 346899999999887642111 11100 012345567788888874 456789999999999999
Q ss_pred HHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh--hcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHH
Q 013204 111 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA--ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 188 (447)
Q Consensus 111 Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (447)
+++.+.... ++++.|++....|++..... +...|.. +..++....+ ..
T Consensus 75 al~~~~~~~-----~~~~~vv~~~~~~~s~~~~~~~~~~~G~~------------v~~v~~~~~g-------------~~ 124 (379)
T TIGR03402 75 AIKSALAAQ-----PEKRHIITTAVEHPAVLSLCQHLEKQGYK------------VTYLPVDEEG-------------RL 124 (379)
T ss_pred HHHHHHHhc-----CCCCeEEEcccccHHHHHHHHHHHHcCCE------------EEEEccCCCC-------------cC
Confidence 998764221 23355555454554432111 1111211 1112211110 01
Q ss_pred HHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCe
Q 013204 189 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL 268 (447)
Q Consensus 189 ~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~ 268 (447)
+.+++++.+. +++.+++++.+++.+|.+.+ +++|.++|++||+++|+|++|+ +|.. + ++.....+|+
T Consensus 125 ~~~~l~~~i~----~~~~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~~~~-~g~~--~--~~~~~~~~D~ 191 (379)
T TIGR03402 125 DLEELRAAIT----DDTALVSVMWANNETGTIFP----IEEIGEIAKERGALFHTDAVQA-VGKI--P--IDLKEMNIDM 191 (379)
T ss_pred CHHHHHHhcC----CCcEEEEEEcccCCeeeccc----HHHHHHHHHHcCCEEEEECccc-cccc--c--cCcccCCCCE
Confidence 1366777664 34577888888888888877 8999999999999999999997 5432 2 2223356799
Q ss_pred eeec--ccCCCcccceeEEEeChhHHHHhhhc---cCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh--hcHHHHHHHHH
Q 013204 269 VSFA--KALSSAYMPIGAILVSPEVSEVIHSQ---SNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIA 341 (447)
Q Consensus 269 v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~--~~~~~~~~~~~ 341 (447)
+++| | +.|+ .++|+++.+++.. +... ....... ...+.+..+..+..++++.+.+ ++..++.+++.
T Consensus 192 ~~~s~~K-~~gp-~G~g~l~v~~~~~--~~p~~~g~~~~~~~---~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~ 264 (379)
T TIGR03402 192 LSLSGHK-LHGP-KGVGALYIRKGTR--FRPLLRGGHQERGR---RAGTENVPGIVGLGKAAELATEHLEEENTRVRALR 264 (379)
T ss_pred EEEcHHH-cCCC-CceEEEEECCCCC--CCCcccCCccCCCc---CCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9988 9 6665 5789998887641 1110 0000011 1234455666666677776543 23345666667
Q ss_pred HHHHHhHhh-ccCCCceeeEe-eeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee--------------
Q 013204 342 PKFQDGVKA-FSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------------- 405 (447)
Q Consensus 342 ~~l~~~L~~-l~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------------- 405 (447)
+++++.|++ +....+..... .....+.+.+.... ...+...|.++||.++.+
T Consensus 265 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~ 332 (379)
T TIGR03402 265 DRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIE------------GEAILLLLDMEGICASSGSACTSGSLEPSHVL 332 (379)
T ss_pred HHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCC------------HHHHHHhhccCCEEEEchhhcCCCCCCcCHHH
Confidence 777777664 42211111110 11122333333211 345777888899998753
Q ss_pred ----------CCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 406 ----------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 406 ----------g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
.+.+|++++..+|++|||++++.|+++++++++
T Consensus 333 ~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 333 RAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred HHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 146999999999999999999999999887653
No 133
>PRK08363 alanine aminotransferase; Validated
Probab=99.89 E-value=3.6e-20 Score=182.18 Aligned_cols=346 Identities=11% Similarity=0.092 Sum_probs=203.6
Q ss_pred CCCEEEecCCcccc-ccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhc----C-cCCCCeEEEeCCh
Q 013204 31 NGKKYLDSLAGLWC-TALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----T-ASKMAKVFFTNSG 104 (447)
Q Consensus 31 dg~~~lD~~~~~~~-~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~-~~~~~~v~~~~sG 104 (447)
+|+.++|+..+... ..++ .++.+.+++.+.+......++ +.....++.+.+++++ . ..+.+++++++|+
T Consensus 28 ~~~~~i~l~~g~p~~~~~~-p~~~~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 102 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQ-PPEHMKEAYCRAIKEGHNYYG----PSEGLPELREAIVKREKRKNGVDITPDDVRVTAAV 102 (398)
T ss_pred cCCCeEEEeCCCCCcCCCC-CCHHHHHHHHHHHHcCCCCCC----CCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCH
Confidence 57889999888543 2455 478899999888765322222 1222344555555543 2 2466799999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhH
Q 013204 105 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 184 (447)
Q Consensus 105 seA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (447)
++|+..++..+. ..++.|++.+++|.+....+...+....... +.+.. .
T Consensus 103 ~~al~~~~~~~~--------~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~------------~~~~~-----------~ 151 (398)
T PRK08363 103 TEALQLIFGALL--------DPGDEILIPGPSYPPYTGLVKFYGGVPVEYR------------TIEEE-----------G 151 (398)
T ss_pred HHHHHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHHcCCEEEEec------------ccccc-----------C
Confidence 999999988663 3457899999999887654443332211100 00000 0
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCC
Q 013204 185 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI 264 (447)
Q Consensus 185 ~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~ 264 (447)
+ ..+++++++.+. ++...++++.|.|++| ...+.+.+++|.++|++||+++|.||+|..+...+.........-
T Consensus 152 ~-~~d~~~l~~~~~---~~~~~v~l~~p~NPtG--~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 225 (398)
T PRK08363 152 W-QPDIDDIRKKIT---EKTKAIAVINPNNPTG--ALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTK 225 (398)
T ss_pred C-cCCHHHHHhhCC---cceEEEEEECCCCCCC--cCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCc
Confidence 0 001255665553 2334455556655554 455788899999999999999999999987643332211111111
Q ss_pred CCCee---eecccCCCcccceeEEEe--ChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHH
Q 013204 265 KPDLV---SFAKALSSAYMPIGAILV--SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQV 337 (447)
Q Consensus 265 ~~d~v---~~sK~l~gg~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~ 337 (447)
...++ +|||.++.+++++|++++ ++++++.+...-. .. ....++.+.+++.++.++|.... -.+..+.+
T Consensus 226 ~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~---~~-~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~ 301 (398)
T PRK08363 226 DVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAID---KL-ARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKL 301 (398)
T ss_pred CCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHH---HH-hcccccCChHHHHHHHHHHhCChHHHHHHHHHH
Confidence 12233 689997655599999997 6665555432100 00 01134556677776666664210 12334555
Q ss_pred HHHHHHHHHhHhhccCCCceeeEeeeeeEEE-EEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-------CEE
Q 013204 338 NKIAPKFQDGVKAFSDSPIIGEIRGTGLILG-TEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNI 409 (447)
Q Consensus 338 ~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-------~~i 409 (447)
+++.+.+.+.|+++ +.+....+.|.++. +.+....... ....+...|.++||.+.++. +.+
T Consensus 302 ~~~~~~l~~~L~~~---~~~~~~~p~g~~~~~~~l~~~~~~~--------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~i 370 (398)
T PRK08363 302 KERRDYIYKRLNEI---PGISTTKPQGAFYIFPRIEEGPWKD--------DKEFVLDVLHEAHVLFVHGSGFGEYGAGHF 370 (398)
T ss_pred HHHHHHHHHHHhcC---CCCEecCCCeEEEEEEEeccCCCCC--------HHHHHHHHHHhCCEEEeCchhhCCCCCCeE
Confidence 66666666666554 22222344555443 4554311000 12223455688999998752 469
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 410 MMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 410 R~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
|++ +..+++++++++++|.+.+++
T Consensus 371 Ris--~~~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 371 RLV--FLPPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred EEE--ecCCHHHHHHHHHHHHHHHHH
Confidence 999 567899999999999988765
No 134
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.89 E-value=5.8e-20 Score=180.90 Aligned_cols=350 Identities=13% Similarity=0.083 Sum_probs=205.7
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcC-CcccccCcCCChHHHHHHHHHHHhcC-cCCCC-eEEEeCChhhH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL-PFYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEA 107 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~-~v~~~~sGseA 107 (447)
.|..++||..+ .+.+..++.+.+++.+.+... ...++...+.......+++.+.+.+. ....+ ++++++|+.+|
T Consensus 31 ~~~~~~~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 31 AGEDIIDFSMG---NPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred cCCCEEEcCCc---CCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 46678999776 333434667888877766432 12222223334445556666554432 23555 79999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCC--CcccCCCCCCChhHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEY 185 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 185 (447)
+..+++... .+++.|++.+|+|.+........+.... .++.+ +.+ +.+.+.
T Consensus 108 l~~~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~g~~~~-------------~v~~~~~~~~-----~~d~~~- 160 (403)
T PRK08636 108 YVHLVQAIT--------NPGDVAIVPDPAYPIHSQAFILAGGNVH-------------KMPLEYNEDF-----ELDEDQ- 160 (403)
T ss_pred HHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHhcCCEEE-------------EEeccccccC-----ccChhh-
Confidence 999998764 3458999999999887654444332111 11110 000 001011
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-ccccCCC
Q 013204 186 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYSI 264 (447)
Q Consensus 186 ~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~~~~~~~ 264 (447)
..+.+++.+....++....+++.|.|++| ...+.+.+++|.++|++|++++|.||+|..+...+... ......-
T Consensus 161 ---l~~~l~~~~~~~~~~~~~i~~~~P~NPTG--~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~ 235 (403)
T PRK08636 161 ---FFENLEKALRESSPKPKYVVVNFPHNPTT--ATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEG 235 (403)
T ss_pred ---hhhHHHHHHhhccCCceEEEEeCCCCCCC--ccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCC
Confidence 12455666654333444455555666766 56688999999999999999999999998774433211 1111111
Q ss_pred CCCe----eeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHH
Q 013204 265 KPDL----VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVN 338 (447)
Q Consensus 265 ~~d~----v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~ 338 (447)
.++. -+|||.++.+++++|++++++++++.+... .....++.+.+.+.++..+++... -+++.+.++
T Consensus 236 ~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li~~~~~~-------~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~ 308 (403)
T PRK08636 236 AKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVGALKKI-------KSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYR 308 (403)
T ss_pred ccccEEEEEecccccCCccceeeeeeCCHHHHHHHHHH-------HHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 1232 258999965449999999999998887532 111123334444554444443111 112334444
Q ss_pred HHHHHHHHhHhhccCCCceeeEe-eeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEee-------CCEE
Q 013204 339 KIAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNI 409 (447)
Q Consensus 339 ~~~~~l~~~L~~l~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------g~~i 409 (447)
++.+.+.+.|++. ++ .... ..|.++++.++...... ....+.+.++ +.||.+.++ .+.+
T Consensus 309 ~~~~~l~~~L~~~---~~-~~~~p~~g~~~~~~l~~~~~~~--------~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~i 376 (403)
T PRK08636 309 KRRDVLIESFANA---GW-ELQKPRASMFVWAKIPEPARHL--------GSLEFSKQLLTEAKVAVSPGIGFGEYGDEYV 376 (403)
T ss_pred HHHHHHHHHHHHC---CC-cccCCCcceEEEEECCCccCCC--------CHHHHHHHHHHhCCEEEecchhhCcCCCCeE
Confidence 4555555555543 22 2222 34666777765321100 1334666644 689999875 1569
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 410 MMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 410 R~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
|++ +..+++++++++++|.+.++..
T Consensus 377 Ri~--~~~~~~~l~~~~~rl~~~l~~~ 401 (403)
T PRK08636 377 RIA--LIENENRIRQAARNIKKFLKEL 401 (403)
T ss_pred EEE--ecCCHHHHHHHHHHHHHHHHhh
Confidence 999 5579999999999999988664
No 135
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.89 E-value=1.1e-20 Score=183.62 Aligned_cols=320 Identities=15% Similarity=0.148 Sum_probs=194.1
Q ss_pred CCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEE-eCChhhHH
Q 013204 30 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEAN 108 (447)
Q Consensus 30 ~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~-~~sGseA~ 108 (447)
.++++++||+++. +++| .+|.+.+++.+.+.....+ +.....++.+.+++++ ..+.+++++ ++|.++++
T Consensus 31 ~~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~y------~~~~~~~lr~~ia~~~-~~~~~~i~~~~~Ga~~~i 100 (361)
T PRK00950 31 IDPESIIKLGSNE--NPLG-PSPKAVEAIEKELSKIHRY------PEPDAPELREALSKYT-GVPVENIIVGGDGMDEVI 100 (361)
T ss_pred CCccceEEccCCC--CCCC-CCHHHHHHHHHHHHhhcCC------CCCCHHHHHHHHHHHh-CCCHHHEEEeCCCHHHHH
Confidence 3567999998774 4677 5889999988877643221 2223477888888886 345678888 56667778
Q ss_pred HHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHH
Q 013204 109 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 188 (447)
Q Consensus 109 ~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (447)
..+++... .+++.|++.++.|..+...... .|... ..++.++.+. .
T Consensus 101 ~~~~~~~~--------~~gd~vlv~~p~y~~~~~~~~~-~g~~~------------~~~~~~~~~~-------------~ 146 (361)
T PRK00950 101 DTLMRTFI--------DPGDEVIIPTPTFSYYEISAKA-HGAKP------------VYAKREEDFS-------------L 146 (361)
T ss_pred HHHHHHhc--------CCCCEEEEcCCChHHHHHHHHH-cCCEE------------EEeecCCCCC-------------c
Confidence 88777652 2346788889988765433322 22111 1111111000 0
Q ss_pred HHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccc-cccCCCCCC
Q 013204 189 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPD 267 (447)
Q Consensus 189 ~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~-~~~~~~~~d 267 (447)
+++++++.+. + ++.+++++..++.+|.+.+ .+++.++|+++|+++|+||+|.+|. .+.... ....+-..-
T Consensus 147 ~~~~l~~~~~---~-~~~~v~~~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~~~~~~~vi~ 217 (361)
T PRK00950 147 DVDSVLNAIT---E-KTKVIFLCTPNNPTGNLIP----EEDIRKILESTDALVFVDEAYVEFA-EYDYTPLALEYDNLII 217 (361)
T ss_pred CHHHHHHHhc---c-CCCEEEEeCCCCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhhC-ccchHHHHHhcCCEEE
Confidence 1356666553 2 3344444444555666666 7788999999999999999998773 111111 111110011
Q ss_pred eeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHh
Q 013204 268 LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDG 347 (447)
Q Consensus 268 ~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~ 347 (447)
+-+|||.++.+++++|++++++++++.+... ..++..+++++.++.++++ ..++.++..+..+..++.
T Consensus 218 ~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~ 285 (361)
T PRK00950 218 GRTFSKVFGLAGLRIGYGFVPEWLIDYYMRA---------KTPFSLTRLSQAAAIAALS---DKEYIEKSIEHGIKSREY 285 (361)
T ss_pred EEeehHhhcCchhhcchhcCCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHH
Confidence 2278999985448999999999998887632 1234456777777766664 233333333333344444
Q ss_pred Hhh-ccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-------CCEEEEecCCCCCH
Q 013204 348 VKA-FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMSPPFIMSP 419 (447)
Q Consensus 348 L~~-l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------g~~iR~~~~~~~t~ 419 (447)
+.+ +. +......|.++.+.+.. . ....+.+.|.++||.+.++ .+.+|++. .++
T Consensus 286 l~~~l~----~~~~~~~~~~i~~~~~~-~-----------~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~---~~~ 346 (361)
T PRK00950 286 LYNELP----FKVYPSEANFVLVDVTP-M-----------TAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSI---GTF 346 (361)
T ss_pred HHhhcC----eeECCCcceEEEEECCC-C-----------CHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEEC---CCH
Confidence 322 21 11123345566666621 1 1456888999999999864 14699993 388
Q ss_pred HHHHHHHHHHHHHH
Q 013204 420 EEVDELISKYGKAL 433 (447)
Q Consensus 420 e~i~~~~~~l~~~l 433 (447)
+++++++++|++++
T Consensus 347 ~~~~~l~~~L~~il 360 (361)
T PRK00950 347 EENERFLEILKEIV 360 (361)
T ss_pred HHHHHHHHHHHHHh
Confidence 89999999998865
No 136
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.89 E-value=6.4e-20 Score=179.49 Aligned_cols=338 Identities=16% Similarity=0.141 Sum_probs=203.0
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhhHHHHH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQ 111 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGseA~~~A 111 (447)
..++||..+. ..+. .+|++.+++.+........+....+.......+++.+.+.+. ..+++++++++|+++|+..+
T Consensus 29 ~~~i~l~~g~--p~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~ 105 (384)
T PRK06348 29 PDIIDLSLGD--PDLI-TDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLA 105 (384)
T ss_pred CCcEEcCCCC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHH
Confidence 3578987664 2344 367787766665543222222222222333444444433322 24678999999999999999
Q ss_pred HHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHH
Q 013204 112 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191 (447)
Q Consensus 112 l~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (447)
+..+. .+++.|++.+|.|.+........+.... .++..+. . .+ ..+++
T Consensus 106 ~~~~~--------~~gd~vlv~~p~y~~~~~~~~~~g~~~~-------------~~~~~~~-------~---~~-~~d~~ 153 (384)
T PRK06348 106 LQSIL--------DPGDEVIIHEPYFTPYKDQIEMVGGKPI-------------ILETYEE-------D---GF-QINVK 153 (384)
T ss_pred HHHhc--------CCCCEEEEeCCCCcchHHHHHHcCCEEE-------------EecCCcC-------c---CC-cCCHH
Confidence 98764 3357899999999887655544332211 1111000 0 00 01136
Q ss_pred HHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccccc-ccCCCCCCee-
Q 013204 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKYSIKPDLV- 269 (447)
Q Consensus 192 ~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~-~~~~~~~d~v- 269 (447)
++++.+. ++...++++.|.|++| ...+.+.+++|.++|++||+++|.||+|.++...+..... ...+....++
T Consensus 154 ~l~~~~~---~~~~~v~l~~p~NPtG--~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~ 228 (384)
T PRK06348 154 KLEALIT---SKTKAIILNSPNNPTG--AVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTIT 228 (384)
T ss_pred HHHHhhC---cCccEEEEeCCCCCCC--cCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEE
Confidence 7777664 2233455566655554 4568899999999999999999999999987433221111 1112222333
Q ss_pred --eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHHHHHHH
Q 013204 270 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAPKFQ 345 (447)
Q Consensus 270 --~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~~~~l~ 345 (447)
+|||.++.+++|+|++++++++++.+.. +....+++.+++++.++..+++..+ .+.+.+.++++.+.+.
T Consensus 229 ~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~ 301 (384)
T PRK06348 229 FGSFSKDFAMTGWRIGYVIAPDYIIETAKI-------INEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAY 301 (384)
T ss_pred EecchhccCCccccceeeecCHHHHHHHHH-------HHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 6899998433999999999998887753 1222356667888887777775321 1234445555666666
Q ss_pred HhHhhccCCCceeeEeeeee-EEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeC-------CEEEEecCCC
Q 013204 346 DGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-------DNIMMSPPFI 416 (447)
Q Consensus 346 ~~L~~l~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g-------~~iR~~~~~~ 416 (447)
+.|+.+ +........|. ++.+.++.... ....+.+.|+ +.||.+.++. +.+|++ +.
T Consensus 302 ~~L~~~---~~~~~~~p~gg~~~~~~~~~~~~----------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~ 366 (384)
T PRK06348 302 KRIESI---PNLSLHPPKGSIYAFINIKKTGL----------SSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLA--CT 366 (384)
T ss_pred HHHhcC---CCceeccCCeeEEEEEecccCCC----------CHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEE--ec
Confidence 666654 22222334444 55666653211 1345777776 5799998652 469999 45
Q ss_pred CCHHHHHHHHHHHHHH
Q 013204 417 MSPEEVDELISKYGKA 432 (447)
Q Consensus 417 ~t~e~i~~~~~~l~~~ 432 (447)
.+++++++++++|++.
T Consensus 367 ~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 367 VGIEVLEEAFNRIEKM 382 (384)
T ss_pred CCHHHHHHHHHHHHhh
Confidence 7899999999988653
No 137
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.89 E-value=7.3e-20 Score=180.23 Aligned_cols=355 Identities=12% Similarity=0.054 Sum_probs=209.3
Q ss_pred EEeCCCCEEEecCCccccccCC--CCCHHHHHHHHHHHhcCC-cccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeC
Q 013204 27 VYDVNGKKYLDSLAGLWCTALG--GSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTN 102 (447)
Q Consensus 27 ~~d~dg~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~ 102 (447)
+...+|+..+++.-|.. ..+| -.+|.+.+++.+.+.... ..|....+..+....+++.+.+.+. ...++++++++
T Consensus 26 ~~~~~~~~~i~l~~G~p-~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~ 104 (409)
T PLN00143 26 FNEDDHRLAISFGFGDP-SCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTL 104 (409)
T ss_pred cccCCCCceeeCCCCCC-CCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEec
Confidence 33456788999877632 2112 167888899988886532 1122222344444445555444321 24668999999
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCCh
Q 013204 103 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE 182 (447)
Q Consensus 103 sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (447)
|+++++..+++... ..++.|++.+|+|++............. .++.... .
T Consensus 105 G~~~al~~~~~~l~--------~~gd~v~v~~P~y~~~~~~~~~~g~~~~-------------~~~~~~~-------~-- 154 (409)
T PLN00143 105 GCKHAAEIIIKVLA--------RPEANILLPRPGFPDVETYAIFHHLEIR-------------HFDLLPE-------K-- 154 (409)
T ss_pred ChHHHHHHHHHHHc--------CCCCEEEEcCCCCcCHHHHHHHcCCEEE-------------EEeccCC-------C--
Confidence 99999999998763 3357899999999887544433221111 1111000 0
Q ss_pred hHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-cccc
Q 013204 183 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDK 261 (447)
Q Consensus 183 ~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~~~~ 261 (447)
.+ ..+++++++++. ++...+++++|.|++| ...+.+.+++|.++|++|++++|.||+|..+...+..+ ....
T Consensus 155 -~~-~~d~~~l~~~~~---~~~~~~~~~nP~NPTG--~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~ 227 (409)
T PLN00143 155 -GW-EVDLDAVEAIAD---ENTIAMVIINPGNPCG--SVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGL 227 (409)
T ss_pred -CC-cCCHHHHHHhcc---cCCEEEEEECCCCCCC--CccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhh
Confidence 00 001366766553 3456778888877666 56688999999999999999999999999875444321 1111
Q ss_pred CCCCCCee---eecccCCCcccceeEEEeC-h-hHH------HHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-
Q 013204 262 YSIKPDLV---SFAKALSSAYMPIGAILVS-P-EVS------EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK- 329 (447)
Q Consensus 262 ~~~~~d~v---~~sK~l~gg~~~~g~~~~~-~-~~~------~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~- 329 (447)
+.-...++ +|||.++.+++|+|+++++ + .++ +.+.. ......+ .+.+++.++.++|+...
T Consensus 228 ~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~q~a~~~~l~~~~~ 299 (409)
T PLN00143 228 FASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKK-------ALNPAPF-PPTFIQAAIPEILEKTTE 299 (409)
T ss_pred hcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHH-------HHhccCC-CCchHHHHHHHHHhcChH
Confidence 21112233 5899876655999999983 3 332 22221 1111122 35567776666664210
Q ss_pred --hhcHHHHHHHHHHHHHHhHhhccCCCcee-eEee-eeeEEEEEeecCCCCCCCCCCCcchHHHHH-HHHHHcCceEEe
Q 013204 330 --ERNIVEQVNKIAPKFQDGVKAFSDSPIIG-EIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFG-AQCEKHGMLVRV 404 (447)
Q Consensus 330 --~~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gi~~~~ 404 (447)
-++..+.+++..+.+.+.|+++ +... ...+ -|.++++++....... . .....+. +.+.++||.+.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~L~~~---~~~~~~~~p~gg~f~w~~l~~~~~~~--~----~~~~~~~~~ll~~~gV~v~p 370 (409)
T PLN00143 300 DFFSKTINILRAALAFCYDKLKEI---PCIMCPQKAEGAFFALVKLNLLLLED--I----EDDMEFCLKLAKEESLIILP 370 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC---CCCCCCCCCCeeEEEEEecchhhcCC--C----CCHHHHHHHHHHhCCEEEeC
Confidence 1223444555555555555554 2211 1122 3567777775310000 0 0022344 455789999998
Q ss_pred eC-----CEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 405 SG-----DNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 405 ~g-----~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
+. +.+|++ +..+++++++++++|.+.+.+..+
T Consensus 371 g~~f~~~~~iRi~--~~~~~~~l~~al~rl~~~l~~~~~ 407 (409)
T PLN00143 371 GVTVGLKNWLRIT--FAVEQSSLEDGLGRLKSFCGRHAK 407 (409)
T ss_pred ccccCCCCeEEEE--EcCCHHHHHHHHHHHHHHHHHhcc
Confidence 63 579999 567899999999999998876543
No 138
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=3.5e-20 Score=179.48 Aligned_cols=340 Identities=17% Similarity=0.176 Sum_probs=218.1
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCCc-cc----ccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YH----SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA 107 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA 107 (447)
-.|+|..++ ++.+..+.+++.+....... .+ ......+....+..+.+++++.-.+.++|+|+++.|+|
T Consensus 23 ~vylD~aa~------~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~a 96 (405)
T COG0520 23 LVYLDNAAT------SQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEA 96 (405)
T ss_pred eEEecCccc------ccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHH
Confidence 468997655 34788999999998754221 11 11111233455666777777643335899999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhc---ccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS---LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 184 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (447)
+.......... ...++.||+..-.+|....--.. ..|... ..++..+...
T Consensus 97 ln~va~~l~~~-----~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v------------~~i~~~~~g~---------- 149 (405)
T COG0520 97 LNLVARGLGRS-----LKPGDEIVVSDLEHHSNIVPWQELAKRTGAKV------------RVIPLDDDGL---------- 149 (405)
T ss_pred HHHHHHHhhhh-----hcCCCEEEEccCcchhhHHHHHHHHHhcCcEE------------EEEecCCCCC----------
Confidence 99988865211 02347888877777776322111 112211 1122111100
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCC
Q 013204 185 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI 264 (447)
Q Consensus 185 ~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~ 264 (447)
.+.+++++++. +++.+|.+..+.+..|.+.| +++|.++||++|+++++|-+|+ ++.. .++.-.+
T Consensus 150 ---~~~~~~~~~i~----~~Tklvais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~-~~h~----~idv~~l 213 (405)
T COG0520 150 ---LDLDALEKLIT----PKTKLVALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQA-AGHL----PIDVQEL 213 (405)
T ss_pred ---cCHHHHHHhcC----CCceEEEEECccccccccch----HHHHHHHHHHcCCEEEEECccc-cCcc----CCCchhc
Confidence 01356666443 57889999999999999988 9999999999999999999987 4322 2333345
Q ss_pred CCCeeeec--ccCCCcccceeEEEeChhHHHHhhhccCCCCccC-----cCC----------CCCCcHHHHHHHHHHHHH
Q 013204 265 KPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS-----HGF----------TYSGHPVSCAVAIEALKI 327 (447)
Q Consensus 265 ~~d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~----------t~~~~~~~~~aa~a~l~~ 327 (447)
..|+++|| |.|.|+ -++|++++++++++.+.+.....+... ... .-+++..+..+..++++.
T Consensus 214 ~~Df~afsgHKwl~gP-~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~ 292 (405)
T COG0520 214 GCDFLAFSGHKWLLGP-TGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDY 292 (405)
T ss_pred CCCEEEEcccccccCC-CceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHH
Confidence 68999998 789887 599999999999988733110000000 000 112234444444556665
Q ss_pred Hhh---hcHHHHHHHHHHHHHHhHhhccCCCceeeEe-eeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEE
Q 013204 328 YKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR 403 (447)
Q Consensus 328 ~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~ 403 (447)
+++ +++.++.+++.+++.+.|++++...+...-. ..+.++.+.+.... ...+...|.++||.++
T Consensus 293 ~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~------------~~dv~~~L~~~gI~vr 360 (405)
T COG0520 293 LLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIH------------PHDVATLLDEKGIAVR 360 (405)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCC------------HHHHHHHHHhCCeEEE
Confidence 554 4566777778888888887774333222221 34555556555432 4568899999998887
Q ss_pred eeC-------------CEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 404 VSG-------------DNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 404 ~~g-------------~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
.+. ..+|+|+.+++|+||||++++.|++..+
T Consensus 361 ~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 361 AGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred eccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 652 2399999999999999999999998764
No 139
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.89 E-value=5.3e-20 Score=180.82 Aligned_cols=351 Identities=12% Similarity=0.054 Sum_probs=206.5
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCC-cccccCcCCChHHHHHHHHHHHhcC-c-CCCC-eEEEeCChhh
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-A-SKMA-KVFFTNSGSE 106 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~-~-~~~~-~v~~~~sGse 106 (447)
.|+.++|+..+. ..++ .+|.+.+++.+.+.... ..++. .+.......+++.+.+.+. . .+++ +|++++|+.+
T Consensus 42 ~~~~~i~L~~g~--p~~~-~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~ 117 (410)
T PRK06290 42 PDMELIDMGVGE--PDEM-ADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKP 117 (410)
T ss_pred CCCCeEEcCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHH
Confidence 477899998775 4555 46788888887664321 11221 2333444445555444332 1 3444 7999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHH
Q 013204 107 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS 186 (447)
Q Consensus 107 A~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (447)
++..++.... ..++.|++.+|+|.+....+...+... ..++..... .+
T Consensus 118 al~~~~~~~~--------~~gd~Vlv~~P~y~~~~~~~~~~g~~v-------------~~v~~~~~~----------~~- 165 (410)
T PRK06290 118 ALAMLPSCFI--------NPGDVTLMTVPGYPVTGTHTKYYGGEV-------------YNLPLLEEN----------NF- 165 (410)
T ss_pred HHHHHHHHhC--------CCCCEEEEeCCCCccHHHHHHHcCCEE-------------EEEecCCCc----------CC-
Confidence 9999888663 335789999999988754443322211 111111000 00
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccccc-ccCCCC
Q 013204 187 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKYSIK 265 (447)
Q Consensus 187 ~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~-~~~~~~ 265 (447)
..+++++++.+. ++...+++++|.|++| .+.+.+.+++|.++|++||++||.||+|..+...+....+ +..+..
T Consensus 166 ~~d~~~l~~~~~---~~~k~i~l~nP~NPTG--~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~ 240 (410)
T PRK06290 166 LPDLDSIPKDIK---EKAKLLYLNYPNNPTG--AVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAK 240 (410)
T ss_pred cCCHHHHHHhhc---ccceEEEEECCCCCCC--cCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCcc
Confidence 001355655553 2233444455766665 5568899999999999999999999999876433321111 111111
Q ss_pred -CCe--eeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHH
Q 013204 266 -PDL--VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIA 341 (447)
Q Consensus 266 -~d~--v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~ 341 (447)
.++ -+|||.++.+++|+|++++++++++.+... ......+.+.+++.++.++|+..+ .++..+.++++.
T Consensus 241 ~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~-------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~ 313 (410)
T PRK06290 241 EVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFATV-------KDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRL 313 (410)
T ss_pred ccEEEEeechhhcCCchhheEeEEeCHHHHHHHHHH-------HhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Confidence 123 268999975559999999999998887632 111223334456666666664211 123455566666
Q ss_pred HHHHHhHhhccCCCceeeEeeeeeE-EEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEE-ee---CCEEEEecC-C
Q 013204 342 PKFQDGVKAFSDSPIIGEIRGTGLI-LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VS---GDNIMMSPP-F 415 (447)
Q Consensus 342 ~~l~~~L~~l~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~-~~---g~~iR~~~~-~ 415 (447)
+.+.+.|+++ ++ ....+.|.+ +++.++......... .....+.++|+++|+++. ++ ++.+||+.. .
T Consensus 314 ~~l~~~L~~~---g~-~~~~p~g~f~l~v~lp~~~~~~~~~----~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~ 385 (410)
T PRK06290 314 DKLVKILNEV---GF-KAEMPGGTFYLYVKAPKGTKSGIKF----ENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFE 385 (410)
T ss_pred HHHHHHHHhC---CC-eecCCCeeeEEEEECCCccccCCCC----CCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcc
Confidence 6677777664 22 222344444 445655321100000 014568889998875554 43 357999933 1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH
Q 013204 416 IMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 416 ~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
..++|+.++++++|++.|..++
T Consensus 386 ~~~~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 386 AKDEEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred cccccchhHHHHHHHHHHhhcc
Confidence 2489999999999999987764
No 140
>PRK08068 transaminase; Reviewed
Probab=99.88 E-value=7.5e-20 Score=179.37 Aligned_cols=337 Identities=13% Similarity=0.053 Sum_probs=198.6
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCc-ccccCcCCChHHHHHHHHHHHhcC-cCCCC-eEEEeCChhhH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEA 107 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~-~v~~~~sGseA 107 (447)
.|..++||..+ ++-...+|.+.+++.+.+..... .++...+..+....+++.+.+.+. ...++ ++++++|++++
T Consensus 30 ~~~~~i~l~~~---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~ 106 (389)
T PRK08068 30 EGHDVINLGQG---NPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAG 106 (389)
T ss_pred cCCCeEEecCC---CCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHH
Confidence 34568999777 33344678899998888764211 121112233344444444443322 13555 79999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
+..++.... .+++.|++.+|+|..+.......+.... .++..... .+ .
T Consensus 107 l~~~~~~~~--------~~gd~vlv~~P~y~~~~~~~~~~g~~~~-------------~i~~~~~~----------~~-~ 154 (389)
T PRK08068 107 LVELPQCLM--------NPGDTILVPDPGYPDYLSGVALARAQFE-------------TMPLIAEN----------NF-L 154 (389)
T ss_pred HHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHhcCCEEE-------------Eeeccccc----------CC-C
Confidence 998877653 2347899999999777544433222111 11110000 00 0
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc-ccc-cccCCCC
Q 013204 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MFG-CDKYSIK 265 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~-~~~-~~~~~~~ 265 (447)
.+++++++.+. .+...+++++|.|++| ...+.+.+++|.++|++|++++|+||+|..+...+. ... ....+..
T Consensus 155 ~d~~~l~~~~~---~~~~~v~l~~P~NPTG--~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~ 229 (389)
T PRK08068 155 PDYTKIPEEVA---EKAKLMYLNYPNNPTG--AVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAK 229 (389)
T ss_pred CCHHHHHHhcc---ccceEEEEECCCCCCC--CcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCcc
Confidence 01255555443 2233455555765655 566889999999999999999999999987755442 111 1222222
Q ss_pred CC---eeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHH
Q 013204 266 PD---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKI 340 (447)
Q Consensus 266 ~d---~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~ 340 (447)
+. +-+|||.++.+++|+|++++++++++.+.... .....+..+..+.++.+++..-. -+...+.++++
T Consensus 230 ~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 302 (389)
T PRK08068 230 DVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQ-------DHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESR 302 (389)
T ss_pred CCEEEEecchhccCCccceeEeEecCHHHHHHHHHHH-------hhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 22 23689999754499999999999988886421 11122233334444445453111 12345666666
Q ss_pred HHHHHHhHhhccCCCceeeEeeeee-EEEEEeecCCCCCCCCCCCcchHHHHHHHHHH-cCceEEee-------CCEEEE
Q 013204 341 APKFQDGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------GDNIMM 411 (447)
Q Consensus 341 ~~~l~~~L~~l~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~-------g~~iR~ 411 (447)
.+.+.+.|+++ ++ ....+.|. ++.+.+.... ....+.+.|++ +||.+.++ .+.+||
T Consensus 303 r~~~~~~L~~~---g~-~~~~~~g~~~~~v~~~~~~-----------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi 367 (389)
T PRK08068 303 RNAFISACREI---GW-EVDAPKGSFFAWMPVPKGY-----------TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRV 367 (389)
T ss_pred HHHHHHHHHHC---CC-cccCCCeeEEEEEECCCCC-----------CHHHHHHHHHHhCCEEEecchHhCccCCCeEEE
Confidence 67777777665 22 22334454 4566665321 13468888886 69999874 247999
Q ss_pred ecCCCCCHHHHHHHHHHHHH
Q 013204 412 SPPFIMSPEEVDELISKYGK 431 (447)
Q Consensus 412 ~~~~~~t~e~i~~~~~~l~~ 431 (447)
+ +..+++.+.+++++|.+
T Consensus 368 ~--~~~~~~~l~~al~~l~~ 385 (389)
T PRK08068 368 G--LLTDEERLREAVERIGK 385 (389)
T ss_pred E--EcCCHHHHHHHHHHHHH
Confidence 9 45677777777777764
No 141
>PRK12414 putative aminotransferase; Provisional
Probab=99.88 E-value=7.5e-20 Score=178.92 Aligned_cols=337 Identities=14% Similarity=0.093 Sum_probs=202.7
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc-CC-CCeEEEeCChhhHHH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SK-MAKVFFTNSGSEAND 109 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~-~~~v~~~~sGseA~~ 109 (447)
...++||..|.. .++ .++.+.+++.+.+......+....+..+....+++.+.+.+.. .. .+++++++|+++|+.
T Consensus 28 ~~~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~ 104 (384)
T PRK12414 28 QHDALNLSQGAP--NFA-PDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLY 104 (384)
T ss_pred hCCeEEcCCCCC--CCC-CCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHH
Confidence 346788877753 344 4788899988877643222222233445566677776666532 12 257999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 189 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (447)
.+++.+. .++++|++.+++|..........+... ..++... +.+ ..+
T Consensus 105 ~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~g~~~-------------~~v~~~~-----------~~~-~~d 151 (384)
T PRK12414 105 AAISALV--------HPGDEVIYFEPSFDSYAPIVRLQGATP-------------VAIKLSP-----------EDF-RVN 151 (384)
T ss_pred HHHHHhc--------CCCCEEEEeCCCccchHHHHHHcCCEE-------------EEEecCc-----------ccc-ccC
Confidence 9988653 345789999999977654433322111 1111100 000 011
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-cc-ccCCCCCC
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC-DKYSIKPD 267 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~~-~~~~~~~d 267 (447)
++++++.+. ++...++++.|.|+ +|. ..+.+.+++|.++|++||+++|+||+|..+...+... .. ...+....
T Consensus 152 ~~~l~~~l~---~~~~~v~i~~p~NP-TG~-~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~ 226 (384)
T PRK12414 152 WDEVAAAIT---PRTRMIIVNTPHNP-SAT-VFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAER 226 (384)
T ss_pred HHHHHhhcC---cccEEEEEcCCCCC-CCc-CCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCc
Confidence 366666553 23333444445455 453 4578889999999999999999999998764444221 11 11122222
Q ss_pred ee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHH
Q 013204 268 LV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPK 343 (447)
Q Consensus 268 ~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~ 343 (447)
++ +|||.++.+++|+|++++++++++.+... ....+++.+.+++.++.+.|+.-. ..+..+.++++.+.
T Consensus 227 ~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~-------~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~ 299 (384)
T PRK12414 227 SVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKV-------HQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDL 299 (384)
T ss_pred EEEEecccccccCccceEEEEecCHHHHHHHHHH-------HhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Confidence 33 58999974449999999999998887632 222345566777777766664210 11244566666667
Q ss_pred HHHhHhhccCCCceeeEeeeee-EEEEEeecCCCCCCCCCCCcchHHHHH-HHHHHcCceEEeeC---------CEEEEe
Q 013204 344 FQDGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFG-AQCEKHGMLVRVSG---------DNIMMS 412 (447)
Q Consensus 344 l~~~L~~l~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gi~~~~~g---------~~iR~~ 412 (447)
+.+.|++. + ....+..|. ++.+.+...... ....+. +.+.++||.+.++. +.+|++
T Consensus 300 l~~~L~~~---g-~~~~~~~gg~~~~~~~~~~~~~---------~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis 366 (384)
T PRK12414 300 LARELAGS---R-FELLPSEGSFFMLARFRHFSDE---------SDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLS 366 (384)
T ss_pred HHHHHHhC---C-CeecCCCcceEEEEcccccCCC---------CHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEE
Confidence 77777664 2 222334454 444455421100 022344 56678899998752 469999
Q ss_pred cCCCCCHHHHHHHHHHHHH
Q 013204 413 PPFIMSPEEVDELISKYGK 431 (447)
Q Consensus 413 ~~~~~t~e~i~~~~~~l~~ 431 (447)
+..+++++++++++|.+
T Consensus 367 --~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 367 --FSKDDATLVEGARRLCS 383 (384)
T ss_pred --ecCCHHHHHHHHHHHhh
Confidence 55689999999998864
No 142
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.88 E-value=6e-20 Score=180.95 Aligned_cols=339 Identities=14% Similarity=0.126 Sum_probs=208.9
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcc-ccc-C---cCCChHHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSF-W---NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGS 105 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~-~---~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGs 105 (447)
++..|||-.+. |..++.+.+++.+.+.+.... ++. . ....+...++.+.+++++...+.++|+|++|++
T Consensus 18 ~~~~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t 91 (401)
T PRK10874 18 DAGVYLDSAAT------ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTT 91 (401)
T ss_pred CceEEEeCCcc------cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHH
Confidence 35689997544 446789999999888653211 110 0 011334556777888887432677999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchh---hhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCCh
Q 013204 106 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL---IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE 182 (447)
Q Consensus 106 eA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (447)
+++..+++.+... ...++++||+.++.|++... ......|... ..++.+..+.
T Consensus 92 ~~i~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v------------~~v~~~~~~~-------- 147 (401)
T PRK10874 92 ESINLVAQSYARP----RLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKV------------VKLPLGADRL-------- 147 (401)
T ss_pred HHHHHHHHHhhhc----cCCCcCEEEECCcchHHHHHHHHHHHHHhCCEE------------EEEecCCCCc--------
Confidence 9999998865210 00234788988888876421 1111122111 1111111000
Q ss_pred hHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccC
Q 013204 183 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY 262 (447)
Q Consensus 183 ~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~ 262 (447)
.+++++++.+. +++.+|++..+++.+|.+.+ +++|.++|+++|+++|+|++|+ +|.. . ....
T Consensus 148 -----~d~~~l~~~i~----~~t~lv~i~~~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~-~g~~--~--~~~~ 209 (401)
T PRK10874 148 -----PDVDLLPELIT----PRTRILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHF--P--ADVQ 209 (401)
T ss_pred -----CCHHHHHHhcC----cCcEEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEECCcc-cccc--c--CCch
Confidence 11366776664 34567777777777887877 8999999999999999999996 4332 1 1222
Q ss_pred CCCCCeeeec--ccCCCcccceeEEEeChhHHHHhhhccCC-----------------CCccCcCCCCCCcHHHHHHHHH
Q 013204 263 SIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNT-----------------LGSFSHGFTYSGHPVSCAVAIE 323 (447)
Q Consensus 263 ~~~~d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~t~~~~~~~~~aa~a 323 (447)
.+.+|++++| |.+ |+ .++|++++++++++.+...... +..+. ..+.+..++++..+
T Consensus 210 ~~~~d~~~~s~~K~~-gp-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e---~Gt~~~~~~~al~~ 284 (401)
T PRK10874 210 ALDIDFYAFSGHKLY-GP-TGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFE---AGTPNVAGVIGLSA 284 (401)
T ss_pred hcCCCEEEEeccccc-CC-CccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhcc---CCCcCHHHHHHHHH
Confidence 3457888766 955 43 4679999999988766421000 00011 11345556666666
Q ss_pred HHHHHhhh---cHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCc
Q 013204 324 ALKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM 400 (447)
Q Consensus 324 ~l~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 400 (447)
+++.+.+. ...++.+++.+++++.|++++...... ...+.++.+.+.... ...+.+.|.++||
T Consensus 285 al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~--~~~~~i~~~~~~~~~------------~~~~~~~L~~~gI 350 (401)
T PRK10874 285 ALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFR--CQDSSLLAFDFAGVH------------HSDLVTLLAEYGI 350 (401)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeC--CCCCcEEEEEECCcC------------HHHHHHHHHHCCc
Confidence 67665443 345566666777777776653221111 122334455543211 3457788899999
Q ss_pred eEEee-------------CCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 401 LVRVS-------------GDNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 401 ~~~~~-------------g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
.++++ .+.+|+++...+|++||++++++|+++++.+
T Consensus 351 ~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 351 ALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred EEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 98763 2469999999999999999999999988754
No 143
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.88 E-value=9.2e-20 Score=176.23 Aligned_cols=322 Identities=16% Similarity=0.164 Sum_probs=204.5
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 112 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al 112 (447)
.+++||..+. +++| .+|.+.+++.+.+.....+ +.....++.+.+++++ ...++++++++|+++++..++
T Consensus 19 ~~~~~l~~~~--~~~~-~p~~~~~a~~~~~~~~~~Y------~~~~~~~lr~~ia~~~-~~~~~~i~it~Ga~~~l~~~~ 88 (354)
T PRK06358 19 NMILDFSANI--NPLG-VPESLKQAITENLDKLVEY------PDPDYLELRKRIASFE-QLDLENVILGNGATELIFNIV 88 (354)
T ss_pred cceEEecCCC--CCCC-CCHHHHHHHHHHHHhhhcC------CCccHHHHHHHHHHHh-CCChhhEEECCCHHHHHHHHH
Confidence 4579997654 5566 3789999998877543222 2233567888888886 457789999999999999888
Q ss_pred HHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHH
Q 013204 113 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 192 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (447)
+.. .+ +.|++.+|.|+.+.......+.. . ..+++... +.+. .+ ++
T Consensus 89 ~~~---------~~-~~v~i~~P~y~~~~~~~~~~g~~-~------------~~~~~~~~----------~~~~-~d-~~ 133 (354)
T PRK06358 89 KVT---------KP-KKVLILAPTFAEYERALKAFDAE-I------------EYAELTEE----------TNFA-AN-EI 133 (354)
T ss_pred HHh---------CC-CcEEEecCChHHHHHHHHHcCCe-e------------EEEeCccc----------cCCC-cc-HH
Confidence 764 22 47889999998776444332211 1 01111000 0000 00 12
Q ss_pred HHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-ccccCCCCCCee--
Q 013204 193 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYSIKPDLV-- 269 (447)
Q Consensus 193 le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~~~~~~~~~d~v-- 269 (447)
+.+.+. ++...++++.|.|++| ...+.+.+++|.++|++|++++|+||+|..|...+... ........+.++
T Consensus 134 ~~~~~~---~~~~~v~~~~P~NPtG--~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~ 208 (354)
T PRK06358 134 VLEEIK---EEIDLVFLCNPNNPTG--QLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIII 208 (354)
T ss_pred HHHhhc---cCCCEEEEeCCCCCCC--CccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEE
Confidence 222222 2233345777866665 45688999999999999999999999999875443211 111122223333
Q ss_pred -eecccCCCcccceeEEEeC-hhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHH
Q 013204 270 -SFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQD 346 (447)
Q Consensus 270 -~~sK~l~gg~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~~~~~~~~~~~~l~~ 346 (447)
+|||.++.+++|+|+++++ +.+++.+... . ..+..+.+++.++.++++.-+. ++..+.++++.+.+.+
T Consensus 209 ~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~-------~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 279 (354)
T PRK06358 209 RAFTKFFAIPGLRLGYGLTSNKNLAEKLLQM-------R--EPWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYN 279 (354)
T ss_pred EechhhccCcchhheeeecCCHHHHHHHHHh-------C--CCCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 5899988433999999985 6777777531 1 2455667777777777742111 2334455556666666
Q ss_pred hHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-------CEEEEecCCCCCH
Q 013204 347 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNIMMSPPFIMSP 419 (447)
Q Consensus 347 ~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-------~~iR~~~~~~~t~ 419 (447)
.|+++ +......+.|.++.+.+.+ ...+.+.|+++||.+.++. +.+|++ ..++
T Consensus 280 ~L~~~---~~~~~~~~~g~f~~~~~~~--------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls---~~~~ 339 (354)
T PRK06358 280 GLSEF---KGIKVYKPSVNFIFFKLEK--------------PIDLRKELLKKGILIRSCSNYRGLDENYYRVA---VKSR 339 (354)
T ss_pred HHhcC---CCcEEcCCcceEEEEEcCc--------------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---eCCH
Confidence 66654 2222334566776666542 1357888999999999752 459999 6788
Q ss_pred HHHHHHHHHHHHHH
Q 013204 420 EEVDELISKYGKAL 433 (447)
Q Consensus 420 e~i~~~~~~l~~~l 433 (447)
++.++++++|++.+
T Consensus 340 ~~~~~l~~~l~~~~ 353 (354)
T PRK06358 340 EDNKKLLKALEVIL 353 (354)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998765
No 144
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.88 E-value=7.7e-20 Score=180.36 Aligned_cols=340 Identities=14% Similarity=0.080 Sum_probs=208.9
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcc-cc-c---CcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhh
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HS-F---WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 106 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~-~---~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGse 106 (447)
+..|||..+. |..++.+++++.+........ ++ . .....+...++.+.+++++...+.++++|++|+++
T Consensus 23 ~~iYld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 96 (406)
T PRK09295 23 PLAYLDSAAS------AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTE 96 (406)
T ss_pred ceEEEeCccc------ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHH
Confidence 4589998655 346789999999888653211 11 0 00112345567778888774335679999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh--h-cccCCccccCCCCCCCCcceecCCCCcccCCCCCCChh
Q 013204 107 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA--A-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 183 (447)
Q Consensus 107 A~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (447)
++..+++...... . .++++||+.+..||...... + ...|... ..++....+.
T Consensus 97 ~l~~~~~~~~~~~---~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v------------~~v~~~~~~~--------- 151 (406)
T PRK09295 97 GINLVANSWGNSN---V-RAGDNIIISEMEHHANIVPWQMLCARVGAEL------------RVIPLNPDGT--------- 151 (406)
T ss_pred HHHHHHHHhhhhc---C-CCcCEEEECcchhhHHHHHHHHHHHHcCcEE------------EEEecCCCCC---------
Confidence 9998887542100 1 23467888877777652211 1 1111111 1111111000
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCC
Q 013204 184 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS 263 (447)
Q Consensus 184 ~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~ 263 (447)
.+++++++.+. +++.+|++..+++..|.+.+ +++|.++|+++|+++++|++|+ +|.. .... ..
T Consensus 152 ----~d~~~l~~~i~----~~t~lv~l~~~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~--~~~~--~~ 214 (406)
T PRK09295 152 ----LQLETLPALFD----ERTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQA-VMHH--PVDV--QA 214 (406)
T ss_pred ----CCHHHHHHhcC----CCcEEEEEecchhcccccCC----HHHHHHHHHHcCCEEEEEcccc-cCcc--ccCc--hh
Confidence 01366776664 24567777788788888877 8999999999999999999996 5433 2222 23
Q ss_pred CCCCeeeec--ccCCCcccceeEEEeChhHHHHhhhccCCC---Cc--c----------CcCCCCCCcHHHHHHHHHHHH
Q 013204 264 IKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTL---GS--F----------SHGFTYSGHPVSCAVAIEALK 326 (447)
Q Consensus 264 ~~~d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~~~---~~--~----------~~~~t~~~~~~~~~aa~a~l~ 326 (447)
..+|++++| |.+ |+ .++|+++.++++++.+....... .. . ....+-+.+..++.+..++++
T Consensus 215 ~~~D~~~~s~~K~~-gp-~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~ 292 (406)
T PRK09295 215 LDCDFYVFSGHKLY-GP-TGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALD 292 (406)
T ss_pred cCCCEEEeehhhcc-CC-CCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHH
Confidence 457888766 944 44 46899999998876653110000 00 0 000122456677777788888
Q ss_pred HHhh---hcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEE
Q 013204 327 IYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR 403 (447)
Q Consensus 327 ~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~ 403 (447)
.+.+ +...++.+++.+++++.|+++....+.... ....++.+.+.... ...+.+.|.++||.++
T Consensus 293 ~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~-~~~~iv~~~~~~~~------------~~~~~~~L~~~gI~v~ 359 (406)
T PRK09295 293 YVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQ-NRLGVIAFNLGKHH------------AYDVGSFLDNYGIAVR 359 (406)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC-CCceEEEEEECCcC------------HHHHHHHHHhCCeEEe
Confidence 7665 335567777777887777765322222211 12344455543211 3457778889999987
Q ss_pred eeC-------------CEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 404 VSG-------------DNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 404 ~~g-------------~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
.+. +.+|+++++.+|++|||+++++|++...
T Consensus 360 ~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 360 TGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred ccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 531 3699999999999999999999988643
No 145
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.88 E-value=1.1e-19 Score=178.72 Aligned_cols=338 Identities=13% Similarity=0.062 Sum_probs=202.7
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-c-CCC-CeEEEeCChhhH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-A-SKM-AKVFFTNSGSEA 107 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~-~~~-~~v~~~~sGseA 107 (447)
.|+.++||..+. ..++ .++.+.+++.+.+..... |+...+..+....+++.+.+.+. . ..+ ++|++++|+++|
T Consensus 27 ~~~~~i~l~~~~--p~~~-~~~~~~~~~~~~~~~~~~-Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~a 102 (396)
T PRK09147 27 ADLPPISLSIGE--PKHP-TPAFIKDALAANLDGLAS-YPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREA 102 (396)
T ss_pred cCCCeEecCCCC--CCCC-CCHHHHHHHHHHhhhhcC-CCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHH
Confidence 488999998775 3344 467888888876654322 22222334445555555554432 1 344 489999999999
Q ss_pred HHHHHHHHHHHHHhcCCC--CcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHH
Q 013204 108 NDTQVKLVWYYNNALGRP--NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 185 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~--~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (447)
+..+++.+. . + .++.|++.+|+|.+........+... ..+++... +.+
T Consensus 103 l~~~~~~l~------~-~~~~gd~vlv~~P~y~~~~~~~~~~g~~~-------------~~vp~~~~----------~~~ 152 (396)
T PRK09147 103 LFAFAQTVI------D-RDGPGPLVVCPNPFYQIYEGAALLAGAEP-------------YFLNCDPA----------NNF 152 (396)
T ss_pred HHHHHHHHc------C-CCCCCCEEEEcCCCccchHHHHHhcCCEE-------------EEeccCcc----------ccC
Confidence 999998764 1 2 14679999999988754443322211 11221100 000
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc--ccc-cc--
Q 013204 186 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFG-CD-- 260 (447)
Q Consensus 186 ~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~--~~~-~~-- 260 (447)
..+++.+++.+. ++...+++++|.|++| ...+.+.+++|.++|++|++++|.||+|..+...+. ... ..
T Consensus 153 -~~d~~~l~~~~~---~~~k~i~l~nP~NPTG--~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 226 (396)
T PRK09147 153 -APDFDAVPAEVW---ARTQLLFVCSPGNPTG--AVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAA 226 (396)
T ss_pred -ccCHHHHHHHHh---hccEEEEEcCCCCCcC--ccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhc
Confidence 011355655543 2334455566666665 566889999999999999999999999987643331 111 10
Q ss_pred -cCCC--CCCee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcH
Q 013204 261 -KYSI--KPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNI 333 (447)
Q Consensus 261 -~~~~--~~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~ 333 (447)
..+. .+.++ +|||.++.+++++|++++++++++.+... ....+++.+++++.++.+.+..-. -.+.
T Consensus 227 ~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~~~~~-------~~~~~~~~~~~~q~a~~~~~~~~~~~~~~ 299 (396)
T PRK09147 227 AELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFLLY-------RTYHGCAMPPAVQAASIAAWNDEAHVREN 299 (396)
T ss_pred cccCccccccEEEEeccccccCCccceeeeecCCHHHHHHHHHH-------hhhcccCCCHHHHHHHHHHhcchhHHHHH
Confidence 1111 12233 58998766559999999999998887531 112244566777777666653100 0122
Q ss_pred HHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEee-------
Q 013204 334 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS------- 405 (447)
Q Consensus 334 ~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------- 405 (447)
.+.++++.+.+.+.|++. ... .....|.++++++.. . ...+.+.|+ ++||.+.++
T Consensus 300 ~~~~~~~~~~~~~~L~~~--~~~--~~p~~g~f~~~~~~~-~------------~~~~~~~ll~~~gv~v~pg~~f~~~~ 362 (396)
T PRK09147 300 RALYREKFDAVTPILAPV--LDV--QLPDAGFYLWAKVPG-D------------DTEFARRLYADYNVTVLPGSYLAREA 362 (396)
T ss_pred HHHHHHHHHHHHHHHHHh--cCC--CCCCeeEEEEEECCC-C------------HHHHHHHHHHhCCEEEeCCccccccc
Confidence 344444445555555442 111 123346677777651 1 234667765 679998764
Q ss_pred ------CCEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 406 ------GDNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 406 ------g~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
.+.+|++ +..+++++++++++|.+.+.
T Consensus 363 ~~~~~~~~~iRi~--~~~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 363 HGVNPGAGRVRIA--LVAPLAECVEAAERIVDFCR 395 (396)
T ss_pred cCCCCCCCeEEEE--ecCCHHHHHHHHHHHHHHhc
Confidence 1469999 56789999999999988763
No 146
>PLN02656 tyrosine transaminase
Probab=99.88 E-value=2.9e-19 Score=176.12 Aligned_cols=353 Identities=14% Similarity=0.081 Sum_probs=207.9
Q ss_pred CCCCEEEecCCcccccc-CCCCCHHHHHHHHHHHhcCC-cccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhh
Q 013204 30 VNGKKYLDSLAGLWCTA-LGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSE 106 (447)
Q Consensus 30 ~dg~~~lD~~~~~~~~~-lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGse 106 (447)
..|+.+++|..|..... .-..++.+++++.+.+.... ..+....+..+....+++.+...++ ...++++++++|+++
T Consensus 28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 107 (409)
T PLN02656 28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQ 107 (409)
T ss_pred ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHH
Confidence 46789999977643211 12357889999988876521 1222112233333444444443321 235679999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHH
Q 013204 107 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS 186 (447)
Q Consensus 107 A~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (447)
|+..++.... ..++.|++.++.|..........+.... .++.... .. +
T Consensus 108 al~~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~-------------~i~~~~~-------~~---~- 155 (409)
T PLN02656 108 AIDVALSMLA--------RPGANILLPRPGFPIYELCAAFRHLEVR-------------YVDLLPE-------KG---W- 155 (409)
T ss_pred HHHHHHHHHh--------CCCCeEEEeCCCCCcHHHHHHHcCCEEE-------------EEeCCCc-------CC---C-
Confidence 9999988763 3347899999999766433332221111 1111000 00 0
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-ccccCCCC
Q 013204 187 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYSIK 265 (447)
Q Consensus 187 ~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~~~~~~~~ 265 (447)
..+++++++.+. +++..++++.|.|++| ...+.+.+++|.++|++||+++|+||+|.+|...+..+ ....++-.
T Consensus 156 ~~d~~~l~~~~~---~~~~~v~l~~P~NPtG--~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 230 (409)
T PLN02656 156 EVDLDAVEALAD---QNTVALVIINPGNPCG--NVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSI 230 (409)
T ss_pred CCCHHHHHHHhc---cCceEEEEECCCCCCC--CCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhccc
Confidence 001366666554 3456677778866665 44578889999999999999999999999875544322 11111111
Q ss_pred CCee---eecccCCCcccceeEEEeC--------hhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh---hh
Q 013204 266 PDLV---SFAKALSSAYMPIGAILVS--------PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK---ER 331 (447)
Q Consensus 266 ~d~v---~~sK~l~gg~~~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~---~~ 331 (447)
..++ +|||.++.+++|+|+++++ +++++.+... .. ...+.+.+++.++.++|+... -.
T Consensus 231 ~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~s~~~q~a~~~~l~~~~~~~~~ 302 (409)
T PLN02656 231 VPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKY-------FD-ILGGPATFIQAAVPTILEQTDESFFK 302 (409)
T ss_pred CcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHH-------Hh-hhcCCCHHHHHHHHHHHhcCcHHHHH
Confidence 1222 5899866655999999983 5677776531 11 112346677777777775211 12
Q ss_pred cHHHHHHHHHHHHHHhHhhccCCCcee-eEeee-eeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC---
Q 013204 332 NIVEQVNKIAPKFQDGVKAFSDSPIIG-EIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--- 406 (447)
Q Consensus 332 ~~~~~~~~~~~~l~~~L~~l~~~~~~~-~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g--- 406 (447)
+..+.++++.+.+.+.|+.+ +... ...+. |.++++++....... ... ....+.+.+.++||.+.|+.
T Consensus 303 ~~~~~~~~~r~~~~~~L~~~---~~~~~~~~p~gg~~~w~~l~~~~~~~--~~~---~~~~~~~~l~~~gV~v~pg~~fg 374 (409)
T PLN02656 303 KTINILKQSSDICCDRIKEI---PCITCPHKPEGSMAVMVKLNLSLLED--ISD---DIDFCFKLAREESVIILPGTAVG 374 (409)
T ss_pred HHHHHHHHHHHHHHHHHhhC---CCCcCCcCCCeEEEEEEecchhhcCC--CCC---HHHHHHHHHHhCCEEEecchhcC
Confidence 23345555555666666554 2111 12333 455666664221000 000 11234567788999999863
Q ss_pred --CEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 407 --DNIMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 407 --~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
+.+|++ +..+++++++++++|++++....
T Consensus 375 ~~~~iRi~--~~~~~e~l~eal~rl~~~~~~~~ 405 (409)
T PLN02656 375 LKNWLRIT--FAADPSSLEEALGRIKSFYLRHS 405 (409)
T ss_pred CCCeEEEE--eCCCHHHHHHHHHHHHHHHHHhc
Confidence 579999 55689999999999999886543
No 147
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.88 E-value=8.4e-20 Score=176.79 Aligned_cols=327 Identities=15% Similarity=0.126 Sum_probs=201.2
Q ss_pred CCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHH
Q 013204 30 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 109 (447)
Q Consensus 30 ~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~ 109 (447)
.+++.++|++.|- +++| .+|.+.+++.+.+.....+ +.....++.+.+++.+ ..+++++++++|+++++.
T Consensus 17 ~~~~~~i~l~~~~--~~~~-~p~~~~~a~~~~~~~~~~y------~~~~~~~lr~~ia~~~-~~~~~~i~it~Ga~~~l~ 86 (356)
T PRK08056 17 ISPDQLLDFSANI--NPLG-MPVSLKRAIIDNLDCAERY------PDVEYRHLHQALARHH-QVPASWILAGNGETESIF 86 (356)
T ss_pred CChhhEEEecccc--CCCC-CCHHHHHHHHHHHHhcccC------cCccHHHHHHHHHHHh-CcChhhEEECCCHHHHHH
Confidence 4567899997653 6677 6888999998877653222 2223677888888886 456789999999999998
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 189 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (447)
.+++.+. ++ .+++.+|+|..+....... |... ..++......+ ..+
T Consensus 87 ~~~~~l~--------~g--~viv~~P~y~~~~~~~~~~-g~~~------------~~v~~~~~~~~-----~~~------ 132 (356)
T PRK08056 87 AVVSGLK--------PR--RAMIVTPGFAEYRRALQQV-GCEI------------RRYSLREADGW-----QLT------ 132 (356)
T ss_pred HHHHHhC--------CC--CEEEeCCCcHHHHHHHHHc-CCeE------------EEEecccccCC-----Ccc------
Confidence 8887541 32 4677889987665433322 2111 11111000000 000
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV 269 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v 269 (447)
+++.+.+. ++...+++..|.|++| ...+.+.+++|.++|++|++++|+||+|.+|...+.............++
T Consensus 133 -~~~~~~~~---~~~k~v~l~~p~NPTG--~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~ 206 (356)
T PRK08056 133 -DAILEALT---PDLDCLFLCTPNNPTG--LLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWV 206 (356)
T ss_pred -HHHHHhcc---CCCCEEEEeCCcCCCC--CCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEE
Confidence 12223232 2333444556656655 36688999999999999999999999998874433211100111112233
Q ss_pred --eecccCCCcccceeEEEeC-hhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHHH
Q 013204 270 --SFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQ 345 (447)
Q Consensus 270 --~~sK~l~gg~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l~ 345 (447)
+|||.++..++++|+++++ +++++.+... ...+..+.+++.++.++++.-. ..+..+.++++.+++.
T Consensus 207 ~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~---------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~ 277 (356)
T PRK08056 207 LRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQ---------QMPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFY 277 (356)
T ss_pred EEechhhccCcchhheeeecCCHHHHHHHHHh---------CCCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 5899988444899999984 6777777531 1234556667766666664110 1233455566666676
Q ss_pred HhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-------CEEEEecCCCCC
Q 013204 346 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNIMMSPPFIMS 418 (447)
Q Consensus 346 ~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-------~~iR~~~~~~~t 418 (447)
+.|+.+.. +...+..|.++.+.+..+ ...+.+.|+++||.+.++. +.+|++ ..+
T Consensus 278 ~~L~~~~~---~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis---~~~ 338 (356)
T PRK08056 278 QALCALPL---LTVWPGRANYLFLRCERP-------------DIDLQRALLTQRILIRSCANYPGLDSRYYRVA---IRS 338 (356)
T ss_pred HHHhcCCC---cEEcCCCCcEEEEEcCCC-------------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---EcC
Confidence 77765522 222344566666665421 2357888999999988652 469999 457
Q ss_pred HHHHHHHHHHHHHHHH
Q 013204 419 PEEVDELISKYGKALK 434 (447)
Q Consensus 419 ~e~i~~~~~~l~~~l~ 434 (447)
+++.+.+++.|+++++
T Consensus 339 ~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 339 AAENERLLAALRNVLT 354 (356)
T ss_pred HHHHHHHHHHHHHHHc
Confidence 8999999999987653
No 148
>PLN02721 threonine aldolase
Probab=99.88 E-value=5.6e-20 Score=178.24 Aligned_cols=335 Identities=17% Similarity=0.127 Sum_probs=197.6
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHH-HhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHH
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQ-LNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 112 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al 112 (447)
+++||+++... ..+|.+.+++.+. ..... .++.+...++++.+++++ +.+.++++++|++++..++
T Consensus 6 ~~~~~~~~~~~----~~~~~~~~a~~~~~~~~~~------~~~~~~~~~l~~~la~~~---~~~~~~~~~~Gs~a~~~~l 72 (353)
T PLN02721 6 RVVDLRSDTVT----KPTDAMRAAMANAEVDDDV------LGYDPTALRLEEEMAKIF---GKEAALFVPSGTMGNLISV 72 (353)
T ss_pred hhhhhhccccc----CCCHHHHHHHHhccCCCcc------cCCCHHHHHHHHHHHHHh---CCceeEEecCccHHHHHHH
Confidence 56788888654 2578999998764 22111 124556789999999997 3446788999999998887
Q ss_pred HHHHHHHHhcCCCCcceEEEEcCCCccchhh--hhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHH
Q 013204 113 KLVWYYNNALGRPNKKKFIARQKSYHGSTLI--AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (447)
.... . .+++.|++.+++|...... .....|... ..++....+ ..++
T Consensus 73 ~~~~------~-~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~-------------~~d~ 120 (353)
T PLN02721 73 LVHC------D-VRGSEVILGDNSHIHLYENGGISTLGGVHP------------RTVKNNEDG-------------TMDL 120 (353)
T ss_pred HHHc------c-CCCCeEEEcCccceehhcccchhhhcCcee------------EecCCCcCC-------------CcCH
Confidence 7653 1 1347788888876332211 111111100 111110000 0114
Q ss_pred HHHHHHHHhhC---CCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc-ccccccCCCCC
Q 013204 191 NNLEDLILKEG---PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MFGCDKYSIKP 266 (447)
Q Consensus 191 ~~le~~l~~~~---~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~-~~~~~~~~~~~ 266 (447)
+++++.+.... .+++++|++++++++.|...++.+.+++|.++|++||+++|+||+|. ++.... ...........
T Consensus 121 ~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~-~~~~~~~~~~~~~~~~~~ 199 (353)
T PLN02721 121 DAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARI-FNASVALGVPVHRLVKAA 199 (353)
T ss_pred HHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhh-hcchhhhCCCHHHHhhhC
Confidence 77777775321 13567888888755543466688899999999999999999999986 422110 00001001123
Q ss_pred C--eeeecccCCCcccceeE-EEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHH
Q 013204 267 D--LVSFAKALSSAYMPIGA-ILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPK 343 (447)
Q Consensus 267 d--~v~~sK~l~gg~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~ 343 (447)
| +++++|++++ ++|+ +++++++++.+..... ...+... .....+++++.+++... +..++..++.++
T Consensus 200 d~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~ 269 (353)
T PLN02721 200 DSVSVCLSKGLGA---PVGSVIVGSKSFIRKAKRLRK----TLGGGMR-QVGVLAAAALVALQENV--PKLEDDHKKAKL 269 (353)
T ss_pred CEEEEecccccCC---ceeeEEecCHHHHHhHHHHHH----hcCCCee-hhHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 4 3468899874 4565 6678888776543111 0111111 11122333344443221 122333556677
Q ss_pred HHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEEEecCCCCCHHHH
Q 013204 344 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEV 422 (447)
Q Consensus 344 l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR~~~~~~~t~e~i 422 (447)
+.+.|+++..... ......+.++.+.+...... ....+.++|.++||.+.+.+ ..+|+++++.++++++
T Consensus 270 l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~L~~~gi~v~~~~~~~lR~~~~~~~~~~~i 339 (353)
T PLN02721 270 LAEGLNQIKGLRV-NVAAVETNIVYFDITDGSRI---------TAEKLCKSLEEHGVLLMPGNSSRIRVVTHHQISDSDV 339 (353)
T ss_pred HHHHHHhCCCcEE-ecCCccceEEEEEccCCccc---------cHHHHHHHHHhCCcEEecCCCceEEEEecCcCCHHHH
Confidence 7787776632211 01123345666666431100 14568899999999999886 5699999989999999
Q ss_pred HHHHHHHHHHHH
Q 013204 423 DELISKYGKALK 434 (447)
Q Consensus 423 ~~~~~~l~~~l~ 434 (447)
++++++|++++.
T Consensus 340 ~~~~~~l~~~~~ 351 (353)
T PLN02721 340 QYTLSCFQQAAL 351 (353)
T ss_pred HHHHHHHHHHhh
Confidence 999999998764
No 149
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.88 E-value=1.7e-20 Score=180.66 Aligned_cols=324 Identities=16% Similarity=0.137 Sum_probs=194.7
Q ss_pred ecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHH
Q 013204 37 DSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW 116 (447)
Q Consensus 37 D~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~ 116 (447)
||+|. +++| .+|++++++.+...... ..++.+...++++.+++.+. .++++++++|++|+..+++..+
T Consensus 1 ~~~~~---~~~~-~~~~v~~a~~~~~~~~~-----~~~~~~~~~~l~~~~a~~~g---~~~~~~~~~gt~a~~~~~~~l~ 68 (338)
T cd06502 1 DFRSD---TVTG-PTPEMLEAMAAANVGDD-----VYGEDPTTAKLEARAAELFG---KEAALFVPSGTAANQLALAAHT 68 (338)
T ss_pred Ccccc---cCCC-CCHHHHHHHHhcccCCc-----ccCCCHHHHHHHHHHHHHhC---CCeEEEecCchHHHHHHHHHhc
Confidence 67666 7788 78999999988653221 12355678899999999874 5688999999999999998763
Q ss_pred HHHHhcCCCCcceEEEEcCCCccchhh--hhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHH
Q 013204 117 YYNNALGRPNKKKFIARQKSYHGSTLI--AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE 194 (447)
Q Consensus 117 ~~~~~~~~~~~~~vi~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 194 (447)
.+++.|++..+.|...... .....|... ..++... + ..+.++++
T Consensus 69 --------~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~-~-------------~~d~~~l~ 114 (338)
T cd06502 69 --------QPGGSVICHETAHIYTDEAGAPEFLSGVKL------------LPVPGEN-G-------------KLTPEDLE 114 (338)
T ss_pred --------CCCCeEEEecCcceeeecCCcHHHHcCceE------------EeecCCC-C-------------cCCHHHHH
Confidence 2346677655544222211 011112111 1111100 0 01136777
Q ss_pred HHHHhhC---CCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCC--CccccccccccCCCCCCee
Q 013204 195 DLILKEG---PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF--GRLGTMFGCDKYSIKPDLV 269 (447)
Q Consensus 195 ~~l~~~~---~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~--g~~g~~~~~~~~~~~~d~v 269 (447)
+++.... ..++++|++++.++.||.. +.+.+++|.++|++||+++|+||+|..+ +..|. ........+|++
T Consensus 115 ~~i~~~~~~~~~~~~~v~l~~p~n~g~~~--~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~--~~~~~~~~~d~~ 190 (338)
T cd06502 115 AAIRPRDDIHFPPPSLVSLENTTEGGTVY--PLDELKAISALAKENGLPLHLDGARLANAAAALGV--ALKTYKSGVDSV 190 (338)
T ss_pred HHhhccCCCcCCcceEEEEEeecCCcccc--CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC--CHHHHHhcCCEE
Confidence 7765311 1245666666665555533 7788999999999999999999987411 11121 111112245655
Q ss_pred --eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHh
Q 013204 270 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDG 347 (447)
Q Consensus 270 --~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~ 347 (447)
+++|.++.. ..+++++++++++.+..... ..++++..+++.++++.++|+.-...+..+++.++.+++.+.
T Consensus 191 ~~s~sK~~~~~--~g~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~ 263 (338)
T cd06502 191 SFCLSKGGGAP--VGAVVVGNRDFIARARRRRK-----QAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEA 263 (338)
T ss_pred EEeccccCCCc--cceEEECCHHHHHHHHHHHH-----HhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 567988753 22345578888887763210 112344556667777777775311233456777777888888
Q ss_pred HhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH---HcCceEEeeC-CEEEEecCCCCCHHHHH
Q 013204 348 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE---KHGMLVRVSG-DNIMMSPPFIMSPEEVD 423 (447)
Q Consensus 348 L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~Gi~~~~~g-~~iR~~~~~~~t~e~i~ 423 (447)
|+++. .. .....+.+..+.+.... .....+.+.+. ++|+++.+.+ +.+|++|++.+++++++
T Consensus 264 L~~~~-~~---~~~~~~~~~~v~~~~~~----------~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i~ 329 (338)
T cd06502 264 LEELG-GL---ESEVQTNIVLLDPVEAN----------AVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVD 329 (338)
T ss_pred HHhcC-CC---cccccCCeEEEecCCcc----------HHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHHH
Confidence 87762 11 11233444444432111 01223334443 6899998765 67999999999999999
Q ss_pred HHHHHHHH
Q 013204 424 ELISKYGK 431 (447)
Q Consensus 424 ~~~~~l~~ 431 (447)
+++++|++
T Consensus 330 ~~~~~l~~ 337 (338)
T cd06502 330 ELLSALKA 337 (338)
T ss_pred HHHHHHhc
Confidence 99999865
No 150
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.88 E-value=5.5e-20 Score=177.85 Aligned_cols=327 Identities=16% Similarity=0.122 Sum_probs=198.3
Q ss_pred ccccCCCCCHHHHHHHHHH-HhcCCcccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhhHHHHHHHHHHHHHH
Q 013204 43 WCTALGGSEPRLVAAATAQ-LNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQVKLVWYYNN 120 (447)
Q Consensus 43 ~~~~lG~~~p~v~~a~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGseA~~~Al~~~~~~~~ 120 (447)
+..++. .+|.++.++.+. .......+....+..+....+++.+...+. ....+.+++++||++|+..+++.+.
T Consensus 6 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~---- 80 (350)
T cd00609 6 GEPDFP-PPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL---- 80 (350)
T ss_pred CCCCCC-CCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC----
Confidence 335555 456666665541 111111111112223333344444443321 1236689999999999999998773
Q ss_pred hcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhh
Q 013204 121 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE 200 (447)
Q Consensus 121 ~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~ 200 (447)
..+++|++..++|++........... +..++..+.... . .. .+.+++.
T Consensus 81 ----~~g~~vl~~~~~~~~~~~~~~~~~~~-------------~~~i~~~~~~~~-----~-~~-----~~~~~~~---- 128 (350)
T cd00609 81 ----NPGDEVLVPDPTYPGYEAAARLAGAE-------------VVPVPLDEEGGF-----L-LD-----LELLEAA---- 128 (350)
T ss_pred ----CCCCEEEEcCCCchhHHHHHHHCCCE-------------EEEEecccccCC-----c-cC-----HHHHHhh----
Confidence 23467888888877665433322211 111221111000 0 00 0222222
Q ss_pred CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccc-cccCC-CCCCee--eecccCC
Q 013204 201 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYS-IKPDLV--SFAKALS 276 (447)
Q Consensus 201 ~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~-~~~~~-~~~d~v--~~sK~l~ 276 (447)
..+++++|++++.++..|.+ .+.+.+++|.++|+++|+++|+||++++++..+.... ....+ ...|++ +++|.++
T Consensus 129 ~~~~~~~v~i~~~~~~tG~~-~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~ 207 (350)
T cd00609 129 KTPKTKLLYLNNPNNPTGAV-LSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFG 207 (350)
T ss_pred cCccceEEEEECCCCCCCcc-cCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccC
Confidence 23567889998888888864 5678899999999999999999999998765443321 01111 123444 5789998
Q ss_pred -CcccceeEEEeCh-hHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHH--hhhcHHHHHHHHHHHHHHhHhhcc
Q 013204 277 -SAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY--KERNIVEQVNKIAPKFQDGVKAFS 352 (447)
Q Consensus 277 -gg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~--~~~~~~~~~~~~~~~l~~~L~~l~ 352 (447)
+| .++|++++++ ++++.+... ....++..+..++.++..+++.. ..+...+++.++.+++++.|++..
T Consensus 208 ~~g-~~~G~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 279 (350)
T cd00609 208 LPG-LRIGYLIAPPEELLERLKKL-------LPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELG 279 (350)
T ss_pred Ccc-cceEEEecCHHHHHHHHHHH-------HHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45 7999999999 788887642 22235667777888777777765 234456677778888888887762
Q ss_pred CCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-------CCEEEEecCCCCCHHHHHHH
Q 013204 353 DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMSPPFIMSPEEVDEL 425 (447)
Q Consensus 353 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------g~~iR~~~~~~~t~e~i~~~ 425 (447)
.... .....|.+..+.+.... ....+.+.|.+.|+.+.+. +..+|++++.. ++||+++
T Consensus 280 ~~~~--~~~~~g~~~~~~~~~~~-----------~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~ 344 (350)
T cd00609 280 PLVV--VKPSGGFFLWLDLPEGD-----------DEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEA 344 (350)
T ss_pred Cccc--cCCCccEEEEEecCCCC-----------hHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHH
Confidence 1111 23344666666654321 1344666777889998865 25799998866 9999999
Q ss_pred HHHHH
Q 013204 426 ISKYG 430 (447)
Q Consensus 426 ~~~l~ 430 (447)
+++|+
T Consensus 345 ~~al~ 349 (350)
T cd00609 345 LERLA 349 (350)
T ss_pred HHHhh
Confidence 99886
No 151
>PRK08175 aminotransferase; Validated
Probab=99.88 E-value=1.7e-19 Score=177.24 Aligned_cols=342 Identities=15% Similarity=0.132 Sum_probs=204.5
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCC-cccccCcCCChHHHHHHHHHHHhcC-cCCCC-eEEEeCChhhHH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEAN 108 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~-~v~~~~sGseA~ 108 (447)
|+.++||..+ ++.+..+|.+.+++.+.+.... ..+....+..+....+++.+.+.+. ...++ ++++++|+++++
T Consensus 28 ~~~~i~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l 104 (395)
T PRK08175 28 GEDIIDFSMG---NPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGL 104 (395)
T ss_pred CCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 6788999876 4445456778888887764321 1122212233344444444443322 13444 699999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHH
Q 013204 109 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 188 (447)
Q Consensus 109 ~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (447)
..++.... ..+++|++.+|+|..........+... ..++.... + .
T Consensus 105 ~~~~~~~~--------~~gd~Vlv~~P~y~~~~~~~~~~g~~~-------------~~v~~~~~------~----~---- 149 (395)
T PRK08175 105 AHLMLATL--------DHGDTVLVPNPSYPIHIYGAVIAGAQV-------------RSVPLVEG------V----D---- 149 (395)
T ss_pred HHHHHHhC--------CCCCEEEEcCCCCcchHHHHHHcCCeE-------------EEEecccC------C----C----
Confidence 88877553 234789999999977654443322111 11111000 0 0
Q ss_pred HHHHHHHHHHhhCCCcEEEEEEc-cccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-c-cccCCCC
Q 013204 189 LANNLEDLILKEGPETIAAFIAE-PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G-CDKYSIK 265 (447)
Q Consensus 189 ~~~~le~~l~~~~~~~~a~vi~e-pv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~-~~~~~~~ 265 (447)
..+++++++....+ .++++++. |.|++ | ...+.+.+++|.++|++||+++|+||+|..+...+... . ....+.
T Consensus 150 ~~~~l~~~l~~~~~-~~~~v~i~~p~NPt-G-~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~- 225 (395)
T PRK08175 150 FFNELERAIRESYP-KPKMMILGFPSNPT-A-QCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGA- 225 (395)
T ss_pred cHHHHHHHHhhccC-CceEEEEeCCCCCC-C-CCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCc-
Confidence 13677777764333 34455555 55554 4 56688899999999999999999999998764333211 1 111111
Q ss_pred CC----eeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHH
Q 013204 266 PD----LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNK 339 (447)
Q Consensus 266 ~d----~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~ 339 (447)
.| +-+|||.++.+++++|++++++++++.+... .....++.+..++.++.++++..+ -+.+.+.+++
T Consensus 226 ~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 298 (395)
T PRK08175 226 KDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARI-------KSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKR 298 (395)
T ss_pred ccCEEEEeeccccccCcchhheeeeCCHHHHHHHHHH-------HhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 23 2368999975558999999999998887632 111233444455665666664211 1223455556
Q ss_pred HHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeC-------CEEEE
Q 013204 340 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-------DNIMM 411 (447)
Q Consensus 340 ~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g-------~~iR~ 411 (447)
+.+.+.+.|+.+ ++.......|.++.+.+.+..... ....+.++++ +.||.+.++. +.+|+
T Consensus 299 ~~~~~~~~L~~~---~~~~~~p~~g~~i~i~l~~~~~~~--------~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRi 367 (395)
T PRK08175 299 RRDVLVKGLHEA---GWMVEMPKASMYVWAKIPEPYAAM--------GSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRF 367 (395)
T ss_pred HHHHHHHHHHHc---CCcccCCCEEEEEEEECCcccCCC--------CHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEE
Confidence 666666767664 221112234667777776432100 1345777665 6899998751 46999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 412 SPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 412 ~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
+ +..+++.+.+++++|.+.+.+
T Consensus 368 s--~~~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 368 A--LIENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred E--eCCCHHHHHHHHHHHHHHHHh
Confidence 9 456899999999999888853
No 152
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.88 E-value=2.1e-19 Score=177.73 Aligned_cols=346 Identities=14% Similarity=0.107 Sum_probs=202.2
Q ss_pred CCEEEecCCccccccCC--CCCHHHHHHHHHHHhcCCc-ccccCcCCChHHHHHHHHHHHhcC-----cCCCCeEEEeCC
Q 013204 32 GKKYLDSLAGLWCTALG--GSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTNS 103 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~-----~~~~~~v~~~~s 103 (447)
|+.++++..|.. ..++ -.+|++.+++.+++..... .++. .....++.+.+++++. ..+.++|++++|
T Consensus 51 ~~~~i~l~~G~P-~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~----~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G 125 (430)
T PLN00145 51 PRPVLPLGHGDP-SAFPCFRTAPEAEDAVAAALRSGKYNSYST----CVGLLPARRAIAEYLSRDLPYELSTDDIYLTAG 125 (430)
T ss_pred CCCeeeCCCCCC-CCCCCCCCCHHHHHHHHHHHHcCcCCCCCC----CccCHHHHHHHHHHHhhccCCCCChhhEEEeCC
Confidence 788999876632 1122 1467899999988865321 1221 2223444455554441 235679999999
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChh
Q 013204 104 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 183 (447)
Q Consensus 104 GseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (447)
+++|+..+++... .++++|++.+|+|..+............ .+++... .
T Consensus 126 ~~~al~l~~~~l~--------~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~-------------~~~~~~~-------~--- 174 (430)
T PLN00145 126 CAQAIEIIMSVLA--------QPGANILLPRPGYPLYEARAVFSGLEVR-------------HFDLLPE-------R--- 174 (430)
T ss_pred HHHHHHHHHHHhc--------CCCCEEEEcCCCCccHHHHHHHcCCEEE-------------EeeCCcc-------c---
Confidence 9999999998763 2347899999999886544433222111 1111000 0
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccc-cccC
Q 013204 184 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKY 262 (447)
Q Consensus 184 ~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~-~~~~ 262 (447)
.+ ..+++++++++. +++.+++++.|.|++| .+.+.+.+++|.++|++||+++|+||+|..+...+..+. ...+
T Consensus 175 ~~-~~d~~~l~~~~~---~~~~~i~i~~P~NPtG--~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~ 248 (430)
T PLN00145 175 GW-EVDLEGVEALAD---ENTVAMVIINPNNPCG--SVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVF 248 (430)
T ss_pred CC-cCCHHHHHHHhC---cCceEEEEeCCCCCCC--CCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhh
Confidence 00 011366766554 3456778888866665 566889999999999999999999999987754332221 1111
Q ss_pred CCCCCee---eecccCCCcccceeEEEe--ChhHHH------HhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh-
Q 013204 263 SIKPDLV---SFAKALSSAYMPIGAILV--SPEVSE------VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE- 330 (447)
Q Consensus 263 ~~~~d~v---~~sK~l~gg~~~~g~~~~--~~~~~~------~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~- 330 (447)
+-...++ +|||.++..++|+|++++ ++.+++ .+.. +.. .....+.+.+.++..+|+.-.+
T Consensus 249 ~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~Q~a~~~~l~~~~~~ 320 (430)
T PLN00145 249 GEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRN-------YLN-ISTDPATFVQGAIPQIIANTKEE 320 (430)
T ss_pred cccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHH-------Hhc-ccCCCCHHHHHHHHHHHhcCHHH
Confidence 1112233 589986665599999997 333332 2221 111 1223456677777666652111
Q ss_pred --hcHHHHHHHHHHHHHHhHhhccCCCceee-Eeee-eeEEEEEeecCCCCCCCCCCCcchHHHHHHH-HHHcCceEEee
Q 013204 331 --RNIVEQVNKIAPKFQDGVKAFSDSPIIGE-IRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVS 405 (447)
Q Consensus 331 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~ 405 (447)
++..+.++++.+.+.+.|+++ +.+.. ..+. |.++.+.+....... .. ....+..+ +.++||++.|+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~L~~~---~g~~~~~~P~ga~y~~v~l~~~~~~~--~~----~~~~~~~~ll~~~gV~v~pG 391 (430)
T PLN00145 321 FFTKTLGLLKETADICYEKIKEI---KCITCPHKPEGSMFVMVKLDLSCLSG--IK----DDMDFCCKLAKEESVVVLPG 391 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC---CCCCCCcCCCeeeEEEeccChhhcCC--CC----CHHHHHHHHHHhCCEEEeCc
Confidence 123344444555555555443 32222 2344 445555554211000 00 12335544 45679999876
Q ss_pred C-----CEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 406 G-----DNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 406 g-----~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
. +.+|++ +..+++++++++++|.+.+.+.++
T Consensus 392 ~~fg~~~~lRis--~~~~~~~l~~al~rl~~~~~~~~~ 427 (430)
T PLN00145 392 SALGMKNWLRIT--FAIDPPSLEDGLERLKSFCLRHAK 427 (430)
T ss_pred cccCCCCeEEEE--eCCCHHHHHHHHHHHHHHHHHhcc
Confidence 2 679999 567899999999999999977654
No 153
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=9.9e-20 Score=177.45 Aligned_cols=332 Identities=14% Similarity=0.142 Sum_probs=199.6
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc-------CCCCeEEEeCChh
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-------SKMAKVFFTNSGS 105 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-------~~~~~v~~~~sGs 105 (447)
+.++|+.+|. ++++ .+|.+.+++.+.+....... ..+.....+|.+.+++++.. ...++|++++|++
T Consensus 28 ~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~---~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~ 101 (374)
T PRK02610 28 IQLDRLDTNE--FPYD-LPPDLKQKLAWLYQQGIESN---RYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSD 101 (374)
T ss_pred cceeEecCCC--CCCC-CCHHHHHHHHHHHhhccccc---CCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChH
Confidence 4588887774 4555 57899999988766521100 11222345566666666531 4667899999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHH
Q 013204 106 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 185 (447)
Q Consensus 106 eA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (447)
+++..++.... .++++.|++.+|+|.++.......+.... .++.... .+
T Consensus 102 ~al~~~~~~~~-------~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~-------------~~~~~~~-----------~~ 150 (374)
T PRK02610 102 ELIRSLLIATC-------LGGEGSILVAEPTFSMYGILAQTLGIPVV-------------RVGRDPE-----------TF 150 (374)
T ss_pred HHHHHHHHHHc-------CCCCCeEEEcCCChHHHHHHHHHcCCEEE-------------EecCCcc-----------cC
Confidence 99987776432 13334799999999887654443322111 1111000 00
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCC
Q 013204 186 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK 265 (447)
Q Consensus 186 ~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~ 265 (447)
. .++++|++.+......++++|++.+.++.+| ...+.+.++.+.++| +++++|.||+|..|.... . .....-.
T Consensus 151 ~-~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG-~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~-~--~~~~~~~ 223 (374)
T PRK02610 151 E-IDLAAAQSAIEQTQNPPVRVVFVVHPNSPTG-NPLTAAELEWLRSLP--EDILVVIDEAYFEFSQTT-L--VGELAQH 223 (374)
T ss_pred C-CCHHHHHHHHHhhcCCCceEEEEeCCCCCCC-CCCCHHHHHHHHhcc--CCcEEEEeccccccCccc-h--HHHHhcC
Confidence 0 1136777766532112455554444455555 445777888888887 499999999998773211 1 1111112
Q ss_pred CCee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHH---
Q 013204 266 PDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNK--- 339 (447)
Q Consensus 266 ~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~--- 339 (447)
+.++ +|||.++.+++|+|++++++++++.+... . ..+..+.+++.++.++++.. +.+.+.+++
T Consensus 224 ~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~-------~--~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~ 292 (374)
T PRK02610 224 PNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKV-------R--LPYNLPSFSQLAAQLALEHR--QELLAAIPEILQ 292 (374)
T ss_pred CCEEEEEecchhccCcccceeeeecCHHHHHHHHHh-------c--CCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHH
Confidence 3333 68999975559999999999999888642 1 13445667777777776532 222222222
Q ss_pred HHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeCCEEEEecCCCCCH
Q 013204 340 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSP 419 (447)
Q Consensus 340 ~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g~~iR~~~~~~~t~ 419 (447)
..+.+.+.|+.+ +.+...+..|.++.+.+.... ....+.+.|.++||.+.+..+.+|++ +. ++
T Consensus 293 ~r~~l~~~L~~~---~~~~~~p~~g~f~~~~l~~~~-----------~~~~~~~~l~~~gi~v~~~~~~lRls--~~-~~ 355 (374)
T PRK02610 293 ERDRLYQALQEL---PQLRVWPSAANFLYLRLSQDA-----------ALAALHQALKAQGTLVRHTGGGLRIT--IG-TP 355 (374)
T ss_pred HHHHHHHHHHhC---CCcEeCCCcceEEEEeCCCCC-----------CHHHHHHHHHHCCEEEEeCCCeEEEe--CC-CH
Confidence 233444444443 222223445667677665321 13457888999999998877789999 33 46
Q ss_pred HHHHHHHHHHHHHHHHH
Q 013204 420 EEVDELISKYGKALKAT 436 (447)
Q Consensus 420 e~i~~~~~~l~~~l~~~ 436 (447)
+++++++++|++++.++
T Consensus 356 ~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 356 EENQRTLERLQAALTQL 372 (374)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 78899999999888654
No 154
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.88 E-value=9.4e-20 Score=177.87 Aligned_cols=325 Identities=16% Similarity=0.132 Sum_probs=194.7
Q ss_pred CCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcc
Q 013204 49 GSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 128 (447)
Q Consensus 49 ~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~ 128 (447)
+.+|.+++++.+++......+..+........++++++++++. .+...+++++||++|+..+++.++.. ...+++
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g-~~~~~~~~~~ggt~a~~~a~~~~~~~----~~~~~~ 105 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLH-LPDAYGYITSGGTEANIQAVRAARNL----AKAEKP 105 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhC-CCCCCeEEecCcHHHHHHHHHHHHhh----ccCCCc
Confidence 5789999999998875322222222233344678888888874 34446889999999999999987533 111245
Q ss_pred eEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEE
Q 013204 129 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF 208 (447)
Q Consensus 129 ~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~v 208 (447)
+|++.++.+..+.. .....|.. +..++.+..+ ..++++|++.+.. ++..++
T Consensus 106 ~vl~~~~~h~s~~~-~~~~~g~~------------~~~v~~~~~~-------------~~d~~~l~~~i~~---~~~~vi 156 (371)
T PRK13520 106 NIVVPESAHFSFDK-AADMLGVE------------LRRAPLDDDY-------------RVDVKAVEDLIDD---NTIGIV 156 (371)
T ss_pred eEEecCcchHHHHH-HHHHcCce------------EEEecCCCCC-------------cCCHHHHHHHHhh---CCEEEE
Confidence 77776665433322 22111211 1112221100 0124778877752 333344
Q ss_pred EEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCc----cccccccccCCCCCCeeeec--ccCCCcccce
Q 013204 209 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR----LGTMFGCDKYSIKPDLVSFA--KALSSAYMPI 282 (447)
Q Consensus 209 i~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~----~g~~~~~~~~~~~~d~v~~s--K~l~gg~~~~ 282 (447)
++.+ ++++|.+.| +++|.++|++||+++++||+|+++.. .+..+.... ...|.++++ |...+| .|+
T Consensus 157 ~~~~-~~~tG~~~~----l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~--~~vd~~~~s~~K~~~a~-~~~ 228 (371)
T PRK13520 157 GIAG-TTELGQVDP----IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSL--PGVDSITIDPHKMGLAP-IPA 228 (371)
T ss_pred EEcC-CcCCcccCC----HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccC--CCCceEEECCccccCcc-CCc
Confidence 4444 456677776 99999999999999999999986521 110111111 235666553 533334 688
Q ss_pred eEEEe-ChhHHHHhhhccCCC-C--ccCcCCCCCCcHHHHHHHHHHHHHHhhhc---HHHHHHHHHHHHHHhHhhccCCC
Q 013204 283 GAILV-SPEVSEVIHSQSNTL-G--SFSHGFTYSGHPVSCAVAIEALKIYKERN---IVEQVNKIAPKFQDGVKAFSDSP 355 (447)
Q Consensus 283 g~~~~-~~~~~~~~~~~~~~~-~--~~~~~~t~~~~~~~~~aa~a~l~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~ 355 (447)
|+++. ++++++.+....... . .+...+| .++..++++.++++.+..++ ..++..++.+++++.|+++ +..
T Consensus 229 G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt--~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~ 305 (371)
T PRK13520 229 GGILFRDESYLDALAVDTPYLTSKKQATLTGT--RSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFE 305 (371)
T ss_pred eEEEEcCHHHHHhhcccCccccCCCCcceEee--ccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCE
Confidence 87776 555776654211000 0 0000112 23345666777787654433 5677777888888888775 322
Q ss_pred ceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC--CEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 356 IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 356 ~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g--~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
+ .......++.+.+.. ...+.++|.++||.+..++ +.+|++++..+|++||+++++.|++++
T Consensus 306 ~--~~~~~~~~v~~~~~~--------------~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~ 369 (371)
T PRK13520 306 P--VIEPVLNIVAFDDPN--------------PDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVK 369 (371)
T ss_pred E--ecCCCceEEEEecCC--------------HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHh
Confidence 1 112233455554431 3468888999999998764 569999888899999999999999876
Q ss_pred H
Q 013204 434 K 434 (447)
Q Consensus 434 ~ 434 (447)
+
T Consensus 370 ~ 370 (371)
T PRK13520 370 K 370 (371)
T ss_pred h
Confidence 4
No 155
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.88 E-value=9.2e-20 Score=184.61 Aligned_cols=349 Identities=13% Similarity=0.118 Sum_probs=205.9
Q ss_pred CCCCEEEecCCccccccCCC-CCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhhH
Q 013204 30 VNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEA 107 (447)
Q Consensus 30 ~dg~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGseA 107 (447)
..|+.+++|..|.- +++|. .++++.+++.+.+..... |+...+..+....+++.+..... ...+++|++++|++++
T Consensus 143 ~~g~~~i~l~~G~p-~~~~~~~p~~~~~~~~~~~~~~~~-Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~ea 220 (517)
T PRK13355 143 AAGTHILKLNIGNP-APFGFRTPDEVVYDMAQQLTDTEG-YSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSEL 220 (517)
T ss_pred HcCCCeEEecCcCC-CcCCCCCCHHHHHHHHHHhhcCCC-CCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHH
Confidence 35788999987643 44564 477899999888764322 22222233333444444332221 2467899999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
+..+++... ..++.|++.+|.|..+...+...++.... +++..... | .
T Consensus 221 l~~~~~~l~--------~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~-------------~~~~~~~~----------~-~ 268 (517)
T PRK13355 221 INLSMSALL--------DDGDEVLIPSPDYPLWTACVNLAGGTAVH-------------YRCDEQSE----------W-Y 268 (517)
T ss_pred HHHHHHHhC--------CCCCEEEEcCCCCcCHHHHHHHCCCEEEE-------------eecCcccC----------C-C
Confidence 999988663 33578999999998887555444332211 11100000 0 0
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCC
Q 013204 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD 267 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d 267 (447)
.+++++++.+. +++.+++++.|.|++| ...+.+.+++|.++|++||+++|+||+|..|...+..+. ......++
T Consensus 269 ~d~~~l~~~~~---~~~k~i~i~nP~NPTG--~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~-s~~~~~~~ 342 (517)
T PRK13355 269 PDIDDIRSKIT---SRTKAIVIINPNNPTG--ALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHT-SIASLAPD 342 (517)
T ss_pred CCHHHHHHhcC---cCceEEEEECCCCCCC--cCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcc-cHHHhCCC
Confidence 01366666553 3445567777766665 455789999999999999999999999997754443211 00111234
Q ss_pred e--e---eecccCCCcccceeEEEe--ChhH----HHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh-hcHH-
Q 013204 268 L--V---SFAKALSSAYMPIGAILV--SPEV----SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIV- 334 (447)
Q Consensus 268 ~--v---~~sK~l~gg~~~~g~~~~--~~~~----~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~~~- 334 (447)
. + +|||.++..++++|+++. ++++ ++.+.. .....++.+.+++.++.++|+.... ++..
T Consensus 343 ~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~ 414 (517)
T PRK13355 343 LFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNM--------LANMRLCSNVPAQSIVQTALGGHQSVKDYLV 414 (517)
T ss_pred CeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHH--------HhcCcCCcChHHHHHHHHHhcCCccHHHHHH
Confidence 2 2 479987654499999984 3443 333321 0111234566777777777742100 1111
Q ss_pred --HHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEE-EEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-----
Q 013204 335 --EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILG-TEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----- 406 (447)
Q Consensus 335 --~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g----- 406 (447)
.+..++.+++.+.|+++ +.+....+.|.++. +.+...... ... ....+.+.|.++||.+.++.
T Consensus 415 ~~~~~~~~r~~l~~~L~~~---~g~~~~~p~g~fy~~~~l~~~~~~---~~~---~~~~~~~ll~~~gV~v~pg~~F~~~ 485 (517)
T PRK13355 415 PGGRVYEQRELVYNALNAI---PGISAVKPKAAFYIFPKIDVKKFN---IHD---DEQFALDLLHDKKVLIVQGTGFNWD 485 (517)
T ss_pred HHHHHHHHHHHHHHHHhcC---CCcccCCCCeeeEEEeecCcccCC---CCC---HHHHHHHHHHhCCEEEeCcchhCCC
Confidence 12233345555555544 33334455666543 355421100 000 12234466778999998751
Q ss_pred --CEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 407 --DNIMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 407 --~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
+.+|++ +..++++|++++++|.+.++..+
T Consensus 486 ~~~~~Ris--~~~~~~~l~~a~~rl~~~~~~~~ 516 (517)
T PRK13355 486 KPDHFRVV--YLPRLEDLEDAMDRLADFFSYYR 516 (517)
T ss_pred CcCEEEEE--eCCCHHHHHHHHHHHHHHHHHhh
Confidence 569999 67899999999999999987643
No 156
>PRK09082 methionine aminotransferase; Validated
Probab=99.88 E-value=1.3e-19 Score=177.54 Aligned_cols=337 Identities=12% Similarity=0.064 Sum_probs=203.4
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc-CCCC-eEEEeCChhhHHH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEAND 109 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~-~v~~~~sGseA~~ 109 (447)
++.++||..|.. .++ .+|.+.+++.+.++.....+....+..+....+++.+.+.+.. .+.+ ++++++|+++|+.
T Consensus 29 ~~~~i~l~~g~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~ 105 (386)
T PRK09082 29 EHGAINLSQGFP--DFD-GPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALF 105 (386)
T ss_pred hCCEEEecCCCC--CCC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHH
Confidence 456789877642 333 4788999998887653222222234455566777777666532 2333 7999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 189 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (447)
.++.... .+++.|++.+++|.+........ |... ..++... +.+ ..+
T Consensus 106 ~~~~~~~--------~~gd~Vli~~p~y~~~~~~~~~~-g~~~------------~~~~~~~-----------~~~-~~d 152 (386)
T PRK09082 106 AAILALV--------RPGDEVIVFDPSYDSYAPAIELA-GGRA------------VRVALQP-----------PDF-RVD 152 (386)
T ss_pred HHHHHHc--------CCCCEEEEeCCCchhhHHHHHHc-CCEE------------EEEecCc-----------ccc-cCC
Confidence 9998663 33578999999887764433332 2111 1111100 000 011
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc--ccccCCCCCC
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF--GCDKYSIKPD 267 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~--~~~~~~~~~d 267 (447)
++++++.+. + ++.+|++...++..| ..++.+.+++|.++|++||+++|+||+|..+...+..+ .....+....
T Consensus 153 ~~~l~~~~~---~-~~~~v~l~~p~NPtG-~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~ 227 (386)
T PRK09082 153 WQRFAAAIS---P-RTRLIILNTPHNPSG-TVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRER 227 (386)
T ss_pred HHHHHHhcC---c-cceEEEEeCCCCCCC-cCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCc
Confidence 356666654 2 344444444444445 34577899999999999999999999998764433221 1122222223
Q ss_pred ee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHHHH
Q 013204 268 LV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAP 342 (447)
Q Consensus 268 ~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~~~ 342 (447)
++ +|||.++.+++|+|++++++++++.+... .....++.+.+++.++.+.++... -+++...++++.+
T Consensus 228 ~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 300 (386)
T PRK09082 228 AFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKV-------HQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRD 300 (386)
T ss_pred EEEEeechhhccchhhhhhhhhCCHHHHHHHHHH-------HhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 33 68999975449999999999998887642 122345566667666555554111 1223445566666
Q ss_pred HHHHhHhhccCCCceeeEeee-eeEEEEEeecCCCCCCCCCCCcchHHHHHHHH-HHcCceEEeeC---------CEEEE
Q 013204 343 KFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVSG---------DNIMM 411 (447)
Q Consensus 343 ~l~~~L~~l~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~g---------~~iR~ 411 (447)
.+.+.|++. .+ ...... |.++.+.+++.... ....+.+.| .++||.+.++. +.+|+
T Consensus 301 ~~~~~L~~~---~~-~~~~~~g~~~~~~~~~~~~~~---------~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri 367 (386)
T PRK09082 301 RFRAALANS---RF-KLLPCEGTYFQLVDYSAISDL---------DDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRL 367 (386)
T ss_pred HHHHHHHhC---CC-cccCCCeeEEEEEeccccCCC---------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEE
Confidence 676766653 21 122233 44556676531110 134577765 57799988752 46999
Q ss_pred ecCCCCCHHHHHHHHHHHHH
Q 013204 412 SPPFIMSPEEVDELISKYGK 431 (447)
Q Consensus 412 ~~~~~~t~e~i~~~~~~l~~ 431 (447)
+ +..+++++++++++|++
T Consensus 368 ~--~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 368 C--FAKQEETLDAAAERLCQ 385 (386)
T ss_pred E--ecCCHHHHHHHHHHHhh
Confidence 9 56689999999998864
No 157
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=5.8e-20 Score=178.12 Aligned_cols=317 Identities=16% Similarity=0.235 Sum_probs=195.5
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 110 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~ 110 (447)
.+.+++||+.+. ++++ .+|.+.+++.+.+.....+ +.....+|.+.+++.+ ...++++++++|+++++..
T Consensus 28 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y------~~~~~~~lr~~ia~~~-~~~~~~I~it~G~~~al~~ 97 (357)
T PRK14809 28 DPDDLVKLSSNE--NPHG-PSPAAVEAIREAAERVHSY------PKASHADLTAALADRW-DVSPEQVWLANGGDGALDY 97 (357)
T ss_pred CccceeEecCCC--CCCC-CCHHHHHHHHHHHhhhhcC------CCCCHHHHHHHHHHHh-CCCcceEEECCCHHHHHHH
Confidence 467899998764 5566 5788999988877542211 2223557888888876 4577899999999999999
Q ss_pred HHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHH
Q 013204 111 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190 (447)
Q Consensus 111 Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (447)
+++... ..++.|++.+|+|..+.......+... ..++++.. +.+. .+.
T Consensus 98 ~~~~~~--------~~gd~V~v~~P~y~~~~~~~~~~g~~~-------------~~~~l~~~----------~~~~-~~~ 145 (357)
T PRK14809 98 LARAML--------DPGDTVLVPDPGFAYYGMSARYHHGEV-------------REYPVSKA----------DDFE-QTA 145 (357)
T ss_pred HHHHhc--------CCCCEEEEeCCChHHHHHHHHHcCCeE-------------EEEecccC----------cCCC-cCH
Confidence 988653 334789999999865543322211111 11111100 0000 001
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCC---
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD--- 267 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d--- 267 (447)
+++++.. ++...+++++|.|++ | ...+.+.+++|+++|++ ++++|.||+|..|...+... ........
T Consensus 146 ~~~~~~~----~~~k~i~l~~p~NPT-G-~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~--~~~~~~~~vi~ 216 (357)
T PRK14809 146 DTVLDAY----DGERIVYLTSPHNPT-G-SEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERPSAV--ALVEERDDVAV 216 (357)
T ss_pred HHHHHhh----cCCcEEEEeCCCCCC-C-cCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCchhH--HHHhhCCCEEE
Confidence 3333322 122345555555554 4 44567778888888875 78999999999875432211 11111122
Q ss_pred eeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHH----HHHHHHHHH
Q 013204 268 LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV----EQVNKIAPK 343 (447)
Q Consensus 268 ~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~----~~~~~~~~~ 343 (447)
+-+|||.++..++++|++++++++++.+... ..++..+.+++.++.++++ .+++. +.++++.+.
T Consensus 217 ~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~ 284 (357)
T PRK14809 217 LRTFSKAYGLAGLRLGYAVVPEEWADAYARV---------NTPFAASELACRAGLAALD---DDEHVERTVETARWAREY 284 (357)
T ss_pred EecchhHhcCcchhheeeecCHHHHHHHHHh---------CCCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHH
Confidence 2368999974348999999999998888631 1255667788777777764 22333 333333333
Q ss_pred HHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-----CEEEEecCCCCC
Q 013204 344 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMS 418 (447)
Q Consensus 344 l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-----~~iR~~~~~~~t 418 (447)
+.+.|+. .. .+..|.++.+.+.+ ...+.+.|.++||.+.++. +.+|++ + .+
T Consensus 285 l~~~L~~---~~----~~~~g~f~~~~~~~--------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRls--~-~~ 340 (357)
T PRK14809 285 IREELDA---PT----WESAGNFVLAEVGD--------------ASAVAEAAQERGVIVRDCTSFGLPECIRIT--C-GT 340 (357)
T ss_pred HHHHhcC---cc----CCCCCCEEEEECCC--------------HHHHHHHHHHCCEEEEECccCCCCCeEEEe--c-CC
Confidence 4444432 11 13456677666531 2357788899999999763 569999 3 36
Q ss_pred HHHHHHHHHHHHHHHH
Q 013204 419 PEEVDELISKYGKALK 434 (447)
Q Consensus 419 ~e~i~~~~~~l~~~l~ 434 (447)
++++++++++|+++++
T Consensus 341 ~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 341 REETERAVEVLNEVLA 356 (357)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 8999999999988764
No 158
>PLN02187 rooty/superroot1
Probab=99.88 E-value=2e-19 Score=179.02 Aligned_cols=352 Identities=14% Similarity=0.071 Sum_probs=206.1
Q ss_pred CCCEEEecCCccccccCC--CCCHHHHHHHHHHHhcCCc-ccccCcCCChHHHHHHHHHHHhcC-----cCCCCeEEEeC
Q 013204 31 NGKKYLDSLAGLWCTALG--GSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTN 102 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~-----~~~~~~v~~~~ 102 (447)
+++.++++..+.. ..+. -.++++.+++.+.+..... .+. +.....++.+.+++++. ...+++|++++
T Consensus 64 ~~~~vi~l~~Gdp-~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~----~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~ 138 (462)
T PLN02187 64 VNKTILPLGHGDP-SVYPCFRTCIEAEDAVVDVLRSGKGNSYG----PGAGILPARRAVADYMNRDLPHKLTPEDIFLTA 138 (462)
T ss_pred CCCCeEECCCCCC-CCCCCCCCCHHHHHHHHHHHhCCCCCCCC----CCCChHHHHHHHHHHHHHhcCCCCCcccEEEeC
Confidence 3566777655411 1111 1345788888888765321 111 22233444455554431 24678999999
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCCh
Q 013204 103 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE 182 (447)
Q Consensus 103 sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (447)
|+++|+..+++... ..++.|++.+|+|.++...+...+. .. ..++.... .
T Consensus 139 G~~~al~~~~~~l~--------~pGd~Vlv~~P~y~~y~~~~~~~g~-~~------------~~~~l~~~-------~-- 188 (462)
T PLN02187 139 GCNQGIEIVFESLA--------RPNANILLPRPGFPHYDARAAYSGL-EV------------RKFDLLPE-------K-- 188 (462)
T ss_pred CHHHHHHHHHHHhc--------CCCCEEEEeCCCCccHHHHHHHcCC-EE------------EEEeCccc-------c--
Confidence 99999999999763 3357899999999887544333221 11 11111000 0
Q ss_pred hHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-cccc
Q 013204 183 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDK 261 (447)
Q Consensus 183 ~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~~~~ 261 (447)
.+ ..+++++++.+. +.+.+++++.|.|++| .+.+.+.+++|.++|++||+++|.||+|..+...+..+ ....
T Consensus 189 -~~-~~d~~~l~~~~~---~~~~~v~i~nP~NPTG--~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~ 261 (462)
T PLN02187 189 -EW-EIDLEGIEAIAD---ENTVAMVVINPNNPCG--NVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGK 261 (462)
T ss_pred -CC-ccCHHHHHHhcC---CCcEEEEEeCCCCCCC--CccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHH
Confidence 00 011366666553 3456788888877766 56688999999999999999999999999864444322 1111
Q ss_pred C-CCCCCee--eecccCCCcccceeEEEeC-hh-H---HHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh---h
Q 013204 262 Y-SIKPDLV--SFAKALSSAYMPIGAILVS-PE-V---SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK---E 330 (447)
Q Consensus 262 ~-~~~~d~v--~~sK~l~gg~~~~g~~~~~-~~-~---~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~---~ 330 (447)
+ +..+-++ +|||.++.+++|+|++++. ++ + ++.+.... ... ..+.+.+.+++.++.++|+.-. -
T Consensus 262 ~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~----~~~-~~~~~~s~~~Q~a~~~~L~~~~~~~l 336 (462)
T PLN02187 262 FASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIK----QNL-DVTPDPATIIQAALPAILEKADKNFF 336 (462)
T ss_pred hccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHH----Hhc-cccCCCCHHHHHHHHHHHhcCcHHHH
Confidence 1 1112222 5899977666999999983 32 2 23332110 101 1122346777777777775211 1
Q ss_pred hcHHHHHHHHHHHHHHhHhhccCCCcee-eEee-eeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC--
Q 013204 331 RNIVEQVNKIAPKFQDGVKAFSDSPIIG-EIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-- 406 (447)
Q Consensus 331 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-- 406 (447)
++..+.++++.+.+.+.|+++ +... ...+ .|.++.+.+....... +. .....+.+.+.++||.+.++.
T Consensus 337 ~~~~~~l~~~r~~l~~~L~~~---~~~~~~~~P~gg~fl~~~l~~~~~~~--~~---~~~~~~~~ll~~~gV~v~pG~~f 408 (462)
T PLN02187 337 AKKNKILKHNVDLVCDRLKDI---PCVVCPKKPESCTYLLTKLELSLMDN--IK---DDIDFCVKLAREENLVFLPGDAL 408 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhhC---CCCcCCCCCCEeEEEEeecChhhCCC--CC---CHHHHHHHHHhhCCEEEECcccc
Confidence 223445555666666666654 3221 1123 3566666654211000 00 012223455688999999763
Q ss_pred ---CEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 013204 407 ---DNIMMSPPFIMSPEEVDELISKYGKALKATEER 439 (447)
Q Consensus 407 ---~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 439 (447)
+.+|++ +..+++.+++++++|.++++...++
T Consensus 409 g~~~~iRis--~~~~~e~l~~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 409 GLKNWMRIT--IGVEAHMLEDALERLKGFCTRHAKK 442 (462)
T ss_pred CCCCeEEEE--eCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 579999 6678999999999999999876653
No 159
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.87 E-value=1.6e-19 Score=176.55 Aligned_cols=341 Identities=16% Similarity=0.154 Sum_probs=200.5
Q ss_pred ccCCCCCHHHHHHHHHHHhcCCc----ccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHH
Q 013204 45 TALGGSEPRLVAAATAQLNTLPF----YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN 120 (447)
Q Consensus 45 ~~lG~~~p~v~~a~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~ 120 (447)
.-+|.-++.+++|+.+....... .+.......+...++.+.+++++ +.+.++|++||++|+..+++.+.
T Consensus 27 ~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~---g~~~~~~~~g~t~a~~~al~~l~---- 99 (387)
T PRK09331 27 QRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL---GMDEARVTHGAREGKFAVMHSLC---- 99 (387)
T ss_pred hcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh---CCCcEEEeCCHHHHHHHHHHHhc----
Confidence 45778899999999998743221 11222234556788999999987 44578999999999999998763
Q ss_pred hcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhh
Q 013204 121 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE 200 (447)
Q Consensus 121 ~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~ 200 (447)
.++++|++..+++.+.. .++...|... ..++.+.... ...+++++++.+...
T Consensus 100 ----~~gd~Vlv~~~~h~s~~-~~~~~~G~~~------------~~v~~~~~~~-----------~~~d~~~l~~~l~~~ 151 (387)
T PRK09331 100 ----KKGDYVVLDGLAHYTSY-VAAERAGLNV------------REVPKTGYPE-----------YKITPEAYAEKIEEV 151 (387)
T ss_pred ----CCCCEEEECCCchHHHH-HHHHHcCCEE------------EEEeCccCcC-----------CCcCHHHHHHHHHHh
Confidence 23466776554443333 2232222211 1111100000 001247777777542
Q ss_pred ---CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee--eecccC
Q 013204 201 ---GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKAL 275 (447)
Q Consensus 201 ---~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v--~~sK~l 275 (447)
..+++++|+++.++++.|.+.+ +++|.++|++||+++|+|++|+ +|..+ +....++ .|++ +++|++
T Consensus 152 ~~~~~~~~~lV~l~~~~~~tG~~~~----l~~I~~la~~~g~~livD~a~~-~g~~~--~~~~~~g--~D~~~~s~~K~l 222 (387)
T PRK09331 152 KEETGKPPALALLTHVDGNYGNLAD----AKKVAKVAHEYGIPFLLNGAYT-VGRMP--VDGKKLG--ADFIVGSGHKSM 222 (387)
T ss_pred hhccCCCCEEEEEECCCCCCccccc----HHHHHHHHHHcCCEEEEECCcc-cCCcC--CCHHHcC--CCEEEeeCcccc
Confidence 1135778888888888888777 9999999999999999999997 44332 1222233 4655 467999
Q ss_pred CCcccceeEEEeChhHHHHhhhccCCCC--ccC-cCCCCCCcHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHhHhhc
Q 013204 276 SSAYMPIGAILVSPEVSEVIHSQSNTLG--SFS-HGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGVKAF 351 (447)
Q Consensus 276 ~gg~~~~g~~~~~~~~~~~~~~~~~~~~--~~~-~~~t~~~~~~~~~aa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l 351 (447)
+++ .++|++++++++++.+........ ... .+++. .+....+++++++.+.+ .+..++..++.+++++.|+++
T Consensus 223 ~~~-~~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l 299 (387)
T PRK09331 223 AAS-APSGVLATTEEYADKVFRTSRKFGVKEVELLGCTL--RGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKI 299 (387)
T ss_pred cCC-CCEEEEEECHHHHhhcccccCCCcccceeeeceec--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 876 589999999998887653211000 000 11121 22233444555554332 233455566777888888877
Q ss_pred cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CE-EEEecCCCCCHHHHHHHHHHH
Q 013204 352 SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DN-IMMSPPFIMSPEEVDELISKY 429 (447)
Q Consensus 352 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~-iR~~~~~~~t~e~i~~~~~~l 429 (447)
++..+...-.....++.++........ ......+..+.+.|.++||...+.+ +. +|+. +..++++++++++++|
T Consensus 300 ~g~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~L~~~gI~~~~~~~~~i~ri~-~~g~t~~di~~l~~aL 375 (387)
T PRK09331 300 EGFKQLGEKPRNHDLMKFETPSFDEIA---KKHKRRGFFLYEELKKRGIHGIKPGATKEFKLS-TYGLTWEQVEYVADAF 375 (387)
T ss_pred CCEEEeccCcCcCCeEEEeCCchhHHh---hhccccchhHHHHHHHcCceEEccCCceEEEEE-eccCCHHHHHHHHHHH
Confidence 433322111122333333322100000 0000013458889999999854443 34 5555 4568999999999999
Q ss_pred HHHHHHH
Q 013204 430 GKALKAT 436 (447)
Q Consensus 430 ~~~l~~~ 436 (447)
+++++++
T Consensus 376 ~~i~~~~ 382 (387)
T PRK09331 376 KEIAEKY 382 (387)
T ss_pred HHHHHhc
Confidence 9887653
No 160
>PRK09105 putative aminotransferase; Provisional
Probab=99.87 E-value=9.7e-20 Score=176.85 Aligned_cols=318 Identities=14% Similarity=0.083 Sum_probs=198.9
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 112 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al 112 (447)
+.++++..+. ++++ .+|.+.+++.+.+.....| +.....+|.+.+++.+ ..++++|++++|+++++..++
T Consensus 43 ~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y------~~~~~~~Lr~aia~~~-~v~~e~I~it~Gs~~ai~~~~ 112 (370)
T PRK09105 43 EGAVFLNANE--CPLG-PSPAARDAAARSAALSGRY------DLELEDDLRTLFAAQE-GLPADHVMAYAGSSEPLNYAV 112 (370)
T ss_pred CCcEEecCCC--CCCC-CCHHHHHHHHHHHHHhcCC------CCchHHHHHHHHHHHh-CcChhhEEEcCChHHHHHHHH
Confidence 4567776553 4555 5889999998877543222 2223678888888876 357789999999999999999
Q ss_pred HHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHH
Q 013204 113 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 192 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (447)
.... ..+++|++.+|+|..+...+...+.. . ..++....+. .++++
T Consensus 113 ~~l~--------~~gd~Vli~~P~y~~~~~~~~~~g~~-~------------~~v~~~~~~~-------------~d~~~ 158 (370)
T PRK09105 113 LAFT--------SPTAGLVTADPTYEAGWRAADAQGAP-V------------AKVPLRADGA-------------HDVKA 158 (370)
T ss_pred HHHc--------CCCCEEEEeCCChHHHHHHHHHcCCe-E------------EEecCCCCCC-------------CCHHH
Confidence 8663 23478999999998876544432221 1 1111110000 01244
Q ss_pred HHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee---
Q 013204 193 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--- 269 (447)
Q Consensus 193 le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v--- 269 (447)
+++. .+++..+++++|.|++| ...+.+.++++.+.|+ +++++|+||+|..|+.. .......+..++++
T Consensus 159 l~~~----~~~~~~v~l~nP~NPTG--~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~--~s~~~~~~~~~~vi~~~ 229 (370)
T PRK09105 159 MLAA----DPNAGLIYICNPNNPTG--TVTPRADIEWLLANKP-AGSVLLVDEAYIHFSDA--PSVVDLVAQRKDLIVLR 229 (370)
T ss_pred HHhc----CCCCCEEEEeCCCCCCC--cCcCHHHHHHHHHhCC-CCcEEEEECchHHhccC--cchHHHHhhCCCEEEEe
Confidence 4432 12334456667766655 4567788888888764 59999999999866421 11112222234544
Q ss_pred eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHHHHhH
Q 013204 270 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGV 348 (447)
Q Consensus 270 ~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l~~~L 348 (447)
+|||.++..++|+|++++++++++.+.. . ..+..+..++.++.++++..+ -++..+.++++.+++.+.|
T Consensus 230 SfSK~~g~~GlRiG~~v~~~~~i~~l~~-------~---~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L 299 (370)
T PRK09105 230 TFSKLYGMAGMRLGLAAARPDLLAKLAR-------F---GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWL 299 (370)
T ss_pred cccHhhcCCccceeeeecCHHHHHHHHh-------c---CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899987544999999999999988863 1 123355666777777665211 1223345555666666666
Q ss_pred hhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEe-e---CCEEEEecCCCCCHHHHHH
Q 013204 349 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV-S---GDNIMMSPPFIMSPEEVDE 424 (447)
Q Consensus 349 ~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~-~---g~~iR~~~~~~~t~e~i~~ 424 (447)
+++ +.. ...+.|.++.+.+.. ....+.+.|+++||.+.. . .+.+|++ ..+++++++
T Consensus 300 ~~~-g~~---~~~~~~~f~~~~~~~-------------~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris---~~~~~~~~~ 359 (370)
T PRK09105 300 KKK-GYK---CTPSQANCFMVDVKR-------------PAKAVADAMAKQGVFIGRSWPIWPNWVRVT---VGSEEEMAA 359 (370)
T ss_pred HHC-CCC---cCCCCCcEEEEeCCC-------------CHHHHHHHHHHCCcEEecCCCCCCCeEEEE---cCCHHHHHH
Confidence 654 222 223456665554431 134588899999999842 1 3579999 347888999
Q ss_pred HHHHHHHHH
Q 013204 425 LISKYGKAL 433 (447)
Q Consensus 425 ~~~~l~~~l 433 (447)
++++|++.+
T Consensus 360 l~~al~~~~ 368 (370)
T PRK09105 360 FRSAFAKVM 368 (370)
T ss_pred HHHHHHHHh
Confidence 999988764
No 161
>PRK07337 aminotransferase; Validated
Probab=99.87 E-value=2.3e-19 Score=175.91 Aligned_cols=342 Identities=13% Similarity=0.123 Sum_probs=203.2
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhhHHHH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDT 110 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGseA~~~ 110 (447)
|..++||..+.. .++ .+|.+.+++.+.+......+....+..+....+++.+...+. ...++++++++|+++|+..
T Consensus 29 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~ 105 (388)
T PRK07337 29 GRDIIHMGIGEP--DFT-APEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLL 105 (388)
T ss_pred CCCEEEeCCcCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHH
Confidence 456788866642 233 468889998887754222222212233344444444443332 2366789999999999988
Q ss_pred HHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHH
Q 013204 111 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190 (447)
Q Consensus 111 Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (447)
++.... ..++.|++.+|+|.+............. .++...... + ..++
T Consensus 106 ~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~-------------~~~~~~~~~----------~-~~~~ 153 (388)
T PRK07337 106 ACLALV--------ERGDEVLMPDPSYPCNRHFVAAAEGRPV-------------LVPSGPAER----------F-QLTA 153 (388)
T ss_pred HHHHhc--------CCCCEEEEeCCCchhhHHHHHHcCCEEE-------------EeecCCccC----------C-cCCH
Confidence 887653 3357899999999877543333222111 111100000 0 0013
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee-
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV- 269 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v- 269 (447)
+++++.+. +++..++++.|.|++| ...+.+.+++|.++|++|++++|+||+|.++...+.... .....++++
T Consensus 154 ~~l~~~~~---~~~~~v~l~~p~NPtG--~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~--~~~~~~~vi~ 226 (388)
T PRK07337 154 ADVEAAWG---ERTRGVLLASPSNPTG--TSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVS--ALSLGDDVIT 226 (388)
T ss_pred HHHHhhcC---ccceEEEEECCCCCCC--cCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcC--hhhccCCEEE
Confidence 56666553 3445566667766655 556788999999999999999999999987754432111 112234544
Q ss_pred --eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHH--h-hhcHHHHHHHHHHHH
Q 013204 270 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY--K-ERNIVEQVNKIAPKF 344 (447)
Q Consensus 270 --~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~--~-~~~~~~~~~~~~~~l 344 (447)
+|||.++.+++++|++++++++++.+... ......+.+.+++.++.++++.- . -.+..+.++++.+.+
T Consensus 227 ~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~-------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~ 299 (388)
T PRK07337 227 INSFSKYFNMTGWRLGWLVVPEALVGTFEKL-------AQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFI 299 (388)
T ss_pred EEechhhcCCchhheeeeecCHHHHHHHHHH-------HHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHH
Confidence 57998875448999999999988877532 11123345666766666665410 0 122344555566666
Q ss_pred HHhHhhccCCCceee-EeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHH-HHHcCceEEee--------CCEEEEecC
Q 013204 345 QDGVKAFSDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVS--------GDNIMMSPP 414 (447)
Q Consensus 345 ~~~L~~l~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~--------g~~iR~~~~ 414 (447)
.+.|+++ +.... ....|.++.+++.....+.. .....+... +.++||.+.++ .+.+|++
T Consensus 300 ~~~L~~~---~~~~~~~p~~g~f~~~~~~~~~~~~~------~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~-- 368 (388)
T PRK07337 300 VPALESL---GFKVPVMPDGAFYVYADCRGVAHPAA------GDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLS-- 368 (388)
T ss_pred HHHHHhc---CCccccCCCeeEEEEEecccccCCCC------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEE--
Confidence 6666654 22111 22346677777753210000 013446666 45789999764 1469999
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 013204 415 FIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 415 ~~~t~e~i~~~~~~l~~~l 433 (447)
+..+++++++++++|.+.+
T Consensus 369 ~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 369 YATSMSRLEEAVARLGKLF 387 (388)
T ss_pred ecCCHHHHHHHHHHHHHHh
Confidence 5568999999999998764
No 162
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.87 E-value=1.8e-19 Score=176.55 Aligned_cols=337 Identities=12% Similarity=0.080 Sum_probs=195.6
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCC-cccccCcCCChHHHHHHHHHHHhcCc-CCCC-eEEEeCChhhH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEA 107 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~-~v~~~~sGseA 107 (447)
.|..++|+..+. ..++ .+|.+.+++.+.+.... ..++...+..+....+++.+.+.+.. .+.+ .+++++|++++
T Consensus 29 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~ 105 (385)
T PRK09276 29 RGVDVISLGIGD--PDLP-TPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEG 105 (385)
T ss_pred cCCCEEEecCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence 456789988774 2343 46788999888875421 11221112233334444444433221 2444 58888999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
+..+++... ..++.|++.+|+|..........+.... .++..... .+.
T Consensus 106 i~~~~~~~~--------~~gd~Vl~~~P~y~~~~~~~~~~g~~~~-------------~v~~~~~~----------g~~- 153 (385)
T PRK09276 106 IAHIPLAFV--------NPGDVVLVPDPGYPVYKIGTIFAGGEPY-------------FMPLKEEN----------GFL- 153 (385)
T ss_pred HHHHHHHhC--------CCCCEEEEcCCCCcChHHHHHHcCCEEE-------------EEecCCCC----------CCc-
Confidence 999988763 3357899999999887554443222111 11110000 000
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-c-cccCCC-
Q 013204 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G-CDKYSI- 264 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~-~~~~~~- 264 (447)
.+++++++.+. ++...++++.|.|++| ...+.+.+++|.++|++||+++|+||+|..+...+... . ....+.
T Consensus 154 ~d~~~l~~~~~---~~~~~v~l~~p~NPtG--~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 228 (385)
T PRK09276 154 PDLDAIPEDVA---KKAKLMFINYPNNPTG--AVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAK 228 (385)
T ss_pred CCHHHHHHhcc---ccceEEEEeCCCCCCC--CCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCc
Confidence 01255555443 2233344444655554 45688999999999999999999999998774333211 1 111111
Q ss_pred --CCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHH
Q 013204 265 --KPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKI 340 (447)
Q Consensus 265 --~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~ 340 (447)
...+-+|||.++..++++|++++++++++.+.... .....+.+++.+.++.++++... -++..+.++++
T Consensus 229 ~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~~~~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 301 (385)
T PRK09276 229 DVGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLGKVK-------SNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQER 301 (385)
T ss_pred CCEEEEecchhhcCCcchhheeeeCCHHHHHHHHHHH-------hhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 12233789999754489999999999988886421 11122334555666666664211 12334555556
Q ss_pred HHHHHHhHhhccCCCceeeEeee-eeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEee-------CCEEEE
Q 013204 341 APKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMM 411 (447)
Q Consensus 341 ~~~l~~~L~~l~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------g~~iR~ 411 (447)
.+.+.+.|+++ ... ...+. |.++.+.+.... ....+.++|+ ++||.+.++ .+.+|+
T Consensus 302 ~~~l~~~L~~~-~~~---~~~~~~~~~~~v~~~~~~-----------~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ri 366 (385)
T PRK09276 302 RDILVEGLRKL-GLE---VEPPKATFYVWAPVPKGY-----------TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRI 366 (385)
T ss_pred HHHHHHHHHhC-CCc---ccCCCcceEEEEECCCCC-----------CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEE
Confidence 66666666654 221 12233 444566664321 1345777776 579999875 146999
Q ss_pred ecCCCCCHHHHHHHHHHHHH
Q 013204 412 SPPFIMSPEEVDELISKYGK 431 (447)
Q Consensus 412 ~~~~~~t~e~i~~~~~~l~~ 431 (447)
+ +..+++++.+++++|.+
T Consensus 367 s--~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 367 A--LTVPDERIEEAVERIKK 384 (385)
T ss_pred E--eCCCHHHHHHHHHHHhh
Confidence 9 55688888888888753
No 163
>PRK07683 aminotransferase A; Validated
Probab=99.87 E-value=4.6e-19 Score=173.52 Aligned_cols=339 Identities=15% Similarity=0.130 Sum_probs=199.6
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-cCCCC-eEEEeCChhhHHHH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEANDT 110 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~-~v~~~~sGseA~~~ 110 (447)
..++|+..+... ++ .++.+.+++.+.+++....+....+..+...++++.+.+.+. ...++ ++++++|+++|+..
T Consensus 28 ~~~i~l~~~~p~--~~-~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~ 104 (387)
T PRK07683 28 DNLISLTIGQPD--FP-TPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDI 104 (387)
T ss_pred CCeEEecCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 467888777422 33 367889999998875322222112233344444444433321 13555 89999999999999
Q ss_pred HHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHH
Q 013204 111 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190 (447)
Q Consensus 111 Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (447)
+++... ..++.|++.++.|.++.......+.... .++.... +.. .+.
T Consensus 105 ~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~-------------~~~~~~~------~~~------~~~ 151 (387)
T PRK07683 105 AFRTIL--------EPGTEVILPAPIYPGYEPIIRLCGAKPV-------------FIDTRST------GFR------LTA 151 (387)
T ss_pred HHHHhC--------CCCCEEEEcCCCccchHHHHHHcCCEEE-------------EeecCcc------cCC------CCH
Confidence 988653 2347899999999887544433221111 1111000 000 012
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccc-cccCCCCCCee
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPDLV 269 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~-~~~~~~~~d~v 269 (447)
+++++.+. ++...+++..|.|++ | ...+.+.+++|.++|+++|+++|.||+|..+...+.... ....+....++
T Consensus 152 ~~l~~~~~---~~~~~i~i~~p~NPt-G-~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi 226 (387)
T PRK07683 152 EALENAIT---EKTRCVVLPYPSNPT-G-VTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTI 226 (387)
T ss_pred HHHHHhcC---cCceEEEEeCCCCCC-C-cCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeE
Confidence 55666553 233334455555554 4 455788999999999999999999999997743332211 12212222222
Q ss_pred ---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHHHHHH
Q 013204 270 ---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAPKF 344 (447)
Q Consensus 270 ---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~~~~l 344 (447)
+|||.++.+++++|++++++++++.+... ......+.+.+++.++.+.|+.-. .+...+.++++.+.+
T Consensus 227 ~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 299 (387)
T PRK07683 227 VINGLSKSHSMTGWRIGFLFAPSYLAKHILKV-------HQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYV 299 (387)
T ss_pred EEeeccccccCccceeEEEEcCHHHHHHHHHH-------HHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 58999984449999999999998887632 111123345566766666664211 123345556666666
Q ss_pred HHhHhhccCCCceeeEeeeee-EEEEEeecCCCCCCCCCCCcchHHHHHHH-HHHcCceEEeeC-------CEEEEecCC
Q 013204 345 QDGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVSG-------DNIMMSPPF 415 (447)
Q Consensus 345 ~~~L~~l~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~g-------~~iR~~~~~ 415 (447)
.+.|+++ + +....+.|. ++.+.+.....+ ...+... +.++||.+.++. +.+||+ +
T Consensus 300 ~~~l~~~---~-~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~--~ 363 (387)
T PRK07683 300 YNRLISM---G-LDVEKPTGAFYLFPSIGHFTMS----------SFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLS--Y 363 (387)
T ss_pred HHHHHHc---C-CcccCCCeeEEEEEecccCCCC----------HHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEE--e
Confidence 6666654 2 112233444 444444321100 2235544 567899998752 579999 5
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 013204 416 IMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 416 ~~t~e~i~~~~~~l~~~l~~ 435 (447)
..+++++.+++++|.+.+.+
T Consensus 364 ~~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 364 AYSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred cCCHHHHHHHHHHHHHHHHh
Confidence 56899999999999988753
No 164
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.87 E-value=1.1e-19 Score=174.00 Aligned_cols=304 Identities=13% Similarity=0.081 Sum_probs=194.9
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 111 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~A 111 (447)
..+++|++++. +++|...+.+.+ ..+..+ +.. ..+|.+.+++.+ +.++|++++|+.+|+..+
T Consensus 19 ~~~~i~l~~ne--~p~~~~~~~~~~---~~~~~y---------p~~-~~~Lr~~ia~~~---~~~~I~it~Gs~~al~~~ 80 (330)
T PRK05664 19 LADWLDLSTGI--APWPWPVPAIPA---DAWARL---------PET-DDGLEAAARAYY---GAPQLLPVAGSQAAIQAL 80 (330)
T ss_pred HHHheeecCCc--CCCCCCCcccCH---HHHHhC---------CCC-hHHHHHHHHHHh---CCCCEEECcCHHHHHHHH
Confidence 34679998776 677765444432 222221 111 257888888887 457899999999998876
Q ss_pred HHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHH
Q 013204 112 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191 (447)
Q Consensus 112 l~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (447)
+.+ ..+++|++.+|+|.+....+...+.... .++ .+
T Consensus 81 ~~~----------~~gd~v~v~~P~y~~~~~~~~~~g~~~~-------------~v~---------------------~~ 116 (330)
T PRK05664 81 PRL----------RAPGRVGVLSPCYAEHAHAWRRAGHQVR-------------ELD---------------------EA 116 (330)
T ss_pred HHc----------cCCCEEEEcCCChHHHHHHHHHcCCeEE-------------Eec---------------------hh
Confidence 531 2347899999999888655444332211 111 13
Q ss_pred HHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee--
Q 013204 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV-- 269 (447)
Q Consensus 192 ~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v-- 269 (447)
++++.+. +...+++++|.|++| ...+.+.+++|.++|+++|+++|.||+|.++... .. ...+.-.+.++
T Consensus 117 ~~~~~~~----~~~~v~l~nP~NPTG--~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~-~s--~~~~~~~~~vi~~ 187 (330)
T PRK05664 117 EVEAALD----SLDVLVVVNPNNPTG--RRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQ-HS--LAACAHRPGLIVL 187 (330)
T ss_pred hHhhhhc----CCCEEEEeCCcCCCC--CccCHHHHHHHHHHHHhcCCEEEEECCcccCCCc-cc--ccccccCCCEEEE
Confidence 4444443 223578888987766 4557788999999999999999999999866321 11 11111123333
Q ss_pred -eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHHHHh
Q 013204 270 -SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDG 347 (447)
Q Consensus 270 -~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l~~~ 347 (447)
+|||.++.+++++|++++++++++.+... ..++..+.+++.++.++|+... .+...+.++++.+++.+.
T Consensus 188 ~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~ 258 (330)
T PRK05664 188 RSFGKFFGLAGARLGFVLAEPALLRALAEL---------LGPWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAAL 258 (330)
T ss_pred eeccccccCCCcceEEEEeCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 68999984449999999999998888631 1234456677777777775322 133456666666777777
Q ss_pred HhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC--CEEEEecCCCCCHHHHHHH
Q 013204 348 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDEL 425 (447)
Q Consensus 348 L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g--~~iR~~~~~~~t~e~i~~~ 425 (447)
|+++ ++ ....+.+.++.+.+. . ...+.+.|+++||.+...+ +.+|++ +..++++++++
T Consensus 259 L~~~---~~-~~~~~~~~f~~~~~~--~------------~~~~~~~l~~~gi~v~~f~~~~~iRis--~~~~~~~~~~l 318 (330)
T PRK05664 259 LRRH---GL-TPAGGCALFQWVRTE--D------------AAALHEFLARRGILTRLFEQPASLRFG--LPADEADWARL 318 (330)
T ss_pred HHHC---CC-cccCCcceEEEEecC--C------------HHHHHHHHHHCCeEEEECCCCCeEEEE--CCCCHHHHHHH
Confidence 7665 21 111222344444432 1 3468888999999998754 679999 44478888888
Q ss_pred HHHHHHHHHH
Q 013204 426 ISKYGKALKA 435 (447)
Q Consensus 426 ~~~l~~~l~~ 435 (447)
.+.|++..++
T Consensus 319 ~~al~~~~~~ 328 (330)
T PRK05664 319 DQALLAYRKE 328 (330)
T ss_pred HHHHHHHHhh
Confidence 8888776554
No 165
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.87 E-value=2.7e-19 Score=175.16 Aligned_cols=337 Identities=14% Similarity=0.100 Sum_probs=197.4
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCC-cccccCcCCChHHHHHHHHHHHhcCc-CCCC-eEEEeCChhhH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEA 107 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~-~v~~~~sGseA 107 (447)
.|..++||..+. ..++ .++.+.+++.+.+.... ..++...+..+....+++.+.+.+.. ...+ .+++++|++++
T Consensus 27 ~~~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~ 103 (383)
T TIGR03540 27 EGVDVISLGIGD--PDLP-TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEG 103 (383)
T ss_pred cCCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHH
Confidence 467889998774 3445 47788999888775421 11221122223344444444433221 2344 68899999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
+..+++... ..++.|++.+|+|.++.......+.... .++..... .+ .
T Consensus 104 l~~~~~~~~--------~~gd~vlv~~P~y~~~~~~~~~~G~~v~-------------~v~~~~~~----------g~-~ 151 (383)
T TIGR03540 104 IAHIPLAFV--------NPGDIVLVPDPGYPVYRIGTLFAGGEPY-------------EMPLKEEN----------GF-L 151 (383)
T ss_pred HHHHHHHhC--------CCCCEEEEeCCCCcchHHHHHhcCCEEE-------------EEecCccc----------CC-c
Confidence 999988663 3357899999999887655444332211 11110000 00 0
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-cc-ccCCCC
Q 013204 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC-DKYSIK 265 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~~-~~~~~~ 265 (447)
.+++++++.+. ++...++++.|.|++ | ..++.+.+++|.++|++||+++|+||+|..+...+... .. ...+..
T Consensus 152 ~d~~~l~~~~~---~~~~~v~i~~P~NPt-G-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~ 226 (383)
T TIGR03540 152 PDFDAIPEDIA---KKAKLMFINYPNNPT-G-AVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAK 226 (383)
T ss_pred cCHHHHHhhcc---ccceEEEEeCCCCCc-C-ccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcc
Confidence 01355655543 223334444465554 4 56688999999999999999999999998764433211 11 111111
Q ss_pred ---CCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHH
Q 013204 266 ---PDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKI 340 (447)
Q Consensus 266 ---~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~ 340 (447)
..+-+|||.++..++|+|++++++++++.+... ......+.+.+.+.++.++++... -++..+.++++
T Consensus 227 ~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 299 (383)
T TIGR03540 227 DVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKV-------KTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRR 299 (383)
T ss_pred cCEEEEEecccccCCccceeeEEeCCHHHHHHHHHH-------HHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 223378999975448999999999998877632 111122334455666666664211 12334555566
Q ss_pred HHHHHHhHhhccCCCceeeEeee-eeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEee-------CCEEEE
Q 013204 341 APKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMM 411 (447)
Q Consensus 341 ~~~l~~~L~~l~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------g~~iR~ 411 (447)
.+.+.+.|++. ++ ...... |.++.+.+.+.. ....+...|+ ++||.+.++ .+.+||
T Consensus 300 ~~~~~~~L~~~---~~-~~~~~~~~~~~~~~l~~~~-----------~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ri 364 (383)
T TIGR03540 300 RDLLLEALKKI---GI-DVEKPKATFYVWVPVPEGY-----------TSAEFAARLLEETGVVVTPGVGFGEYGEGYIRI 364 (383)
T ss_pred HHHHHHHHHhC---CC-EecCCCcceEEEEECCCCC-----------CHHHHHHHHHHHCCEEEecchhhCccCCCeEEE
Confidence 66666666654 22 222333 445666664321 1345777765 689999875 146999
Q ss_pred ecCCCCCHHHHHHHHHHHHH
Q 013204 412 SPPFIMSPEEVDELISKYGK 431 (447)
Q Consensus 412 ~~~~~~t~e~i~~~~~~l~~ 431 (447)
+ +..+++++.+++++|.+
T Consensus 365 s--~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 365 S--LTVPDERLEEAVARIKK 382 (383)
T ss_pred E--ecCCHHHHHHHHHHHhh
Confidence 9 55788888888887754
No 166
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.87 E-value=2.9e-19 Score=175.91 Aligned_cols=354 Identities=14% Similarity=0.083 Sum_probs=211.6
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc-CCCCeEEEeCChhhHHH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEAND 109 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~v~~~~sGseA~~ 109 (447)
.|.+.+|+..+.. .++ .+|.+.+++.+.+......+....+..+....+++.+.+.+.. ...+++++++|+++|+.
T Consensus 31 ~~~~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 107 (402)
T PRK06107 31 AGRSIVDLTVGEP--DFD-TPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIF 107 (402)
T ss_pred ccCCEEEcCCCCC--CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence 3567889877753 233 4788999988888643222332234445666677777665432 35678999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 189 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (447)
.+++... ..++.|++.++.|.++........+.. ..++++.... +. .+
T Consensus 108 ~~~~~~~--------~~gd~vl~~~p~y~~y~~~~~~~~~~~-------------~~v~~~~~~~----------~~-~~ 155 (402)
T PRK06107 108 LALMATL--------EAGDEVIIPAPYWVSYPDMVLANDGTP-------------VIVACPEEQG----------FK-LT 155 (402)
T ss_pred HHHHHhc--------CCCCEEEEecCCCcCHHHHHHHcCCEE-------------EEecCCcccC----------CC-CC
Confidence 9987543 335788999998877754333322211 1111110000 00 01
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhc-CCEEEEehhhcCCCccccccc-c-cc-CCCC
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY-DILFIADEVICAFGRLGTMFG-C-DK-YSIK 265 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~-g~~li~DEv~~g~g~~g~~~~-~-~~-~~~~ 265 (447)
++++++.+. ++..+++++.|.|++| ..++.+.+++|+++|++| ++++|+||+|..+...+..+. . .. .+..
T Consensus 156 ~~~l~~~~~---~~~~~v~l~~p~NPtG--~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~ 230 (402)
T PRK06107 156 PEALEAAIT---PRTRWLILNAPSNPTG--AVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELR 230 (402)
T ss_pred HHHHHhhcC---cCceEEEEECCCCCCC--cCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCcc
Confidence 256666553 3344566666766665 566889999999999998 999999999987644442211 1 11 1122
Q ss_pred CCee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHH
Q 013204 266 PDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKI 340 (447)
Q Consensus 266 ~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~ 340 (447)
..++ +|||.++..++++|++++++++++.+... ....+++.+.+++.++...|+.-. -++..+.++++
T Consensus 231 ~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~-------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 303 (402)
T PRK06107 231 DRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKL-------QSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQR 303 (402)
T ss_pred CCEEEEeccchhhcCcccceeeeecCHHHHHHHHHH-------HHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHH
Confidence 2344 46899874448999999999998887632 222345667778877777764110 12233455555
Q ss_pred HHHHHHhHhhccCCCceeeEeeee-eEEEEEeecCCCCCCCCCCCcchHHHHHHH-HHHcCceEEeeC-----CEEEEec
Q 013204 341 APKFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVSG-----DNIMMSP 413 (447)
Q Consensus 341 ~~~l~~~L~~l~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~g-----~~iR~~~ 413 (447)
.+.+.+.|+++ +.+....+.| .++++.+..-.....+..........+... +.++||.+.++. +.+|++
T Consensus 304 ~~~~~~~L~~~---~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis- 379 (402)
T PRK06107 304 RDYALALLNAI---PGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLS- 379 (402)
T ss_pred HHHHHHHHhcC---CCCcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEE-
Confidence 55666666554 2222233334 445555531100000000000012345544 457899998762 569999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q 013204 414 PFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 414 ~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
+..++|++++++++|.+.++++
T Consensus 380 -~~~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 380 -IATSLETLEEACARIERAVAAL 401 (402)
T ss_pred -eCCCHHHHHHHHHHHHHHHHhc
Confidence 6678999999999999988765
No 167
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.87 E-value=2.1e-19 Score=178.24 Aligned_cols=344 Identities=14% Similarity=0.088 Sum_probs=208.3
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcc-cccCc----CCChHHHHHHHHHHHhcCcCCCCeEEEeCChhh
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWN----RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 106 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~~----~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGse 106 (447)
+..|||..+. |..++.+.+++.+.+.+.... ++... ...+...++.+.+++++...+.++|+|++|+++
T Consensus 32 ~~iyLd~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 105 (424)
T PLN02855 32 KLVYLDNAAT------SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATE 105 (424)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHH
Confidence 3578887433 446788999998887653211 11000 011234567778888774333579999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhh---cccCCccccCCCCCCCCcceecCCCCcccCCCCCCChh
Q 013204 107 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 183 (447)
Q Consensus 107 A~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (447)
++..+++..... .-..+++|++..+.|++...... ...|... ..++.....
T Consensus 106 al~~i~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v------------~~v~~~~~~---------- 159 (424)
T PLN02855 106 AINLVAYTWGLA----NLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVL------------KFVGLTPDE---------- 159 (424)
T ss_pred HHHHHHHHhhhh----cCCCcCEEEECCCccHHHHHHHHHHHHHcCCEE------------EEEecCCCC----------
Confidence 999988753100 00234678887777765421111 1112111 111111000
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCC
Q 013204 184 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS 263 (447)
Q Consensus 184 ~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~ 263 (447)
..+++++++.+. .++.+|++..+++..|.+.+ +++|.++|+++|+++++|++|. +|.. . +....
T Consensus 160 ---~~~~~~l~~~i~----~~t~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~-~g~~--~--~~~~~ 223 (424)
T PLN02855 160 ---VLDVEQLKELLS----EKTKLVATHHVSNVLGSILP----VEDIVHWAHAVGAKVLVDACQS-VPHM--P--VDVQT 223 (424)
T ss_pred ---CcCHHHHHHHhc----cCceEEEEeCccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCc--C--CCchh
Confidence 011366777664 25677888888888888887 8999999999999999999996 4432 1 22223
Q ss_pred CCCCeeee--cccCCCcccceeEEEeChhHHHHhhhccCCCCc----c---------Cc-CCCCCCcHHHHHHHHHHHHH
Q 013204 264 IKPDLVSF--AKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS----F---------SH-GFTYSGHPVSCAVAIEALKI 327 (447)
Q Consensus 264 ~~~d~v~~--sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~----~---------~~-~~t~~~~~~~~~aa~a~l~~ 327 (447)
..+|++++ .| +.|+ .++|++++++++++.+......... + .. ....+.+..++++..++++.
T Consensus 224 ~~~d~~~~s~~K-~~gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~ 301 (424)
T PLN02855 224 LGADFLVASSHK-MCGP-TGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDY 301 (424)
T ss_pred cCCCEEEeeccc-ccCC-CccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHH
Confidence 34788754 58 5554 4689999999887766421000000 0 00 01112455566666677776
Q ss_pred Hhh---hcHHHHHHHHHHHHHHhHhhccCCCceeeE----eeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHc-C
Q 013204 328 YKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI----RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-G 399 (447)
Q Consensus 328 ~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~----~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G 399 (447)
+.+ ++..++..++.+++++.|+++.+..+.... ...+.++.+.+.... ...+.+.|.++ |
T Consensus 302 ~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~------------~~~v~~~L~~~~g 369 (424)
T PLN02855 302 LSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIH------------PTDLSTFLDQQHG 369 (424)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcC------------HHHHHHHhcccCC
Confidence 654 345567777778888877765332222211 122445555554211 34577888777 9
Q ss_pred ceEEeeC-------------CEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 400 MLVRVSG-------------DNIMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 400 i~~~~~g-------------~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
|.++.+. ..+|+++++.+|++||+++++.|+++++.++
T Consensus 370 I~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 370 VAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred EEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9887431 4699999999999999999999999887753
No 168
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.87 E-value=1.4e-19 Score=179.81 Aligned_cols=326 Identities=13% Similarity=0.073 Sum_probs=199.5
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc--CCCCeEEEeCChhhHHHHH
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA--SKMAKVFFTNSGSEANDTQ 111 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~v~~~~sGseA~~~A 111 (447)
..+||..+ .+.....|.+.+++.+....... ++ +.....+|.+.+++++.. ...++|++++|+.+|+..+
T Consensus 86 ~~i~L~~g---~p~~~~~p~~~~~~~~~~~~~~~-Y~----~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~ 157 (431)
T PRK15481 86 PLHDLAGG---NPDPQRLPDLSRYFARLSRTPRL-YG----DAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERL 157 (431)
T ss_pred hhhhhhcC---CCChhHhHHHHHHHHHhhhhhhh-cC----CcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHH
Confidence 34566554 22222346667777665443211 11 122234455566655421 2345899999999999999
Q ss_pred HHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHH
Q 013204 112 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191 (447)
Q Consensus 112 l~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (447)
++.+. ..++.|++.+|+|.+........+.... .++..+. + .+++
T Consensus 158 ~~~l~--------~pgd~Vlv~~P~y~~~~~~~~~~g~~~~-------------~v~~~~~------g--------~~~~ 202 (431)
T PRK15481 158 LCAHL--------LPGDSVAVEDPCFLSSINMLRYAGFSAS-------------PVSVDAE------G--------MQPE 202 (431)
T ss_pred HHHhC--------CCCCEEEEeCCCcHHHHHHHHHcCCeEE-------------eeccCCC------C--------CCHH
Confidence 98763 3357899999999888655544332211 1111000 0 0136
Q ss_pred HHHHHHHhhCCCcEEEEEE-ccccCCCCCccCChhHHHHHHHHHHhc-CCEEEEehhhcCCCccccccccccCCCCCCee
Q 013204 192 NLEDLILKEGPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKY-DILFIADEVICAFGRLGTMFGCDKYSIKPDLV 269 (447)
Q Consensus 192 ~le~~l~~~~~~~~a~vi~-epv~~~~G~~~~~~~~l~~l~~l~~~~-g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v 269 (447)
++++.+.. +..+++++ +|.|++| ...+.+.+++|.++|++| ++++|.||+|..|...+...... ...+.++
T Consensus 203 ~l~~~~~~---~~k~i~~~p~p~NPTG--~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~--~~~~~vi 275 (431)
T PRK15481 203 KLERALAQ---GARAVILTPRAHNPTG--CSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIP--QTTQRWA 275 (431)
T ss_pred HHHHHHhc---CCCEEEECCCCCCCCC--ccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCc--CCCCCEE
Confidence 77777652 22234444 4556665 455788899999999999 99999999998774322111111 1123333
Q ss_pred ---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh----hcHHHHHHHHHH
Q 013204 270 ---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE----RNIVEQVNKIAP 342 (447)
Q Consensus 270 ---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~----~~~~~~~~~~~~ 342 (447)
+|||.++.| +++|++++++++++.+... ....+++.+.+++.++.++|+.-.- .+..+.++++.+
T Consensus 276 ~~~SfSK~~~~G-lRiG~~i~~~~~~~~~~~~-------~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~ 347 (431)
T PRK15481 276 LIRSVSKALGPD-LRLAFVASDSATSARLRLR-------LNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQ 347 (431)
T ss_pred EEeeeccccCCC-ceeEEEeCCHHHHHHHHHH-------HhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHH
Confidence 689999954 9999999999998887531 1112345677888888777753111 123455555566
Q ss_pred HHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC--------CEEEEecC
Q 013204 343 KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--------DNIMMSPP 414 (447)
Q Consensus 343 ~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g--------~~iR~~~~ 414 (447)
.+.+.|++. ++....+..|.++++.+... ...+.+.|.++||.+.++. +.+|++..
T Consensus 348 ~~~~~L~~~---~~~~~~p~gg~f~~~~l~~~-------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~ 411 (431)
T PRK15481 348 KLARALQQY---GIAIPSPGDGLNLWLPLDTD-------------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLS 411 (431)
T ss_pred HHHHHHHHc---CCccccCCCeEEEEEECCCC-------------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcC
Confidence 666666554 22111234566777776531 2357788889999998741 36999954
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 013204 415 FIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 415 ~~~t~e~i~~~~~~l~~~l~ 434 (447)
. .+++++++++++|.+++.
T Consensus 412 ~-~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 412 T-LNDAEINRLAADLHQALN 430 (431)
T ss_pred C-CChHHHHHHHHHHHHHhc
Confidence 2 579999999999998864
No 169
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.87 E-value=3.9e-19 Score=171.82 Aligned_cols=332 Identities=14% Similarity=0.099 Sum_probs=196.0
Q ss_pred EEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-cCCCC-eEEEeCChhhHHHHHH
Q 013204 35 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEANDTQV 112 (447)
Q Consensus 35 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~-~v~~~~sGseA~~~Al 112 (447)
.+||.++.. .++ .+|++.+++.+.......| +...+..+....+++.+.+.+. ..+.+ +|++++|+++|+..++
T Consensus 2 ~~~~~~g~p--~~~-~~~~~~~~~~~~~~~~~~Y-~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~ 77 (350)
T TIGR03537 2 LFDFGTGDP--KEP-TPPFIRKALIDAVPEVSQY-PSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFP 77 (350)
T ss_pred eEeccCCCC--CCC-CCHHHHHHHHHHHhccCCC-CCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHH
Confidence 578877753 344 4788999988876543222 2112233444445555543322 23555 8999999999998888
Q ss_pred HHHHHHHHhcCCCC--cceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHH
Q 013204 113 KLVWYYNNALGRPN--KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190 (447)
Q Consensus 113 ~~~~~~~~~~~~~~--~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (447)
..+. .++ ++.|++.+|+|.++.......+.... .++.... . .+ ..++
T Consensus 78 ~~~~-------~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~-------------~v~~~~~-------~---~~-~~d~ 126 (350)
T TIGR03537 78 LVFI-------DPEEDRRRVIFGTPGYPVYERGALFAGGEPT-------------AVKLKKE-------D---GF-LLRL 126 (350)
T ss_pred HHHc-------CCCCCCceEEEcCCCCcchHHHHHhcCCEEE-------------EcccCcc-------c---CC-ccCH
Confidence 7653 122 26899999999888655544332211 1111000 0 00 0113
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee-
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV- 269 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v- 269 (447)
+++++.+.. +...++++.|.|++ | ...+.+.+++|.++|++||+++|+||+|..+...+........+. +.++
T Consensus 127 ~~l~~~~~~---~~~~i~i~~p~NPt-G-~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~ 200 (350)
T TIGR03537 127 EKVEKSILE---ETKIVWINYPHNPT-G-ATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGI-ENVLA 200 (350)
T ss_pred HHHHHhhhh---ccEEEEEeCCCCCc-C-cccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCc-CCEEE
Confidence 667766642 23334445454554 4 556889999999999999999999999976522222211111111 2222
Q ss_pred --eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHHHH
Q 013204 270 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQD 346 (447)
Q Consensus 270 --~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l~~ 346 (447)
++||.++.+++++|++++++++++.+... ....+.+.+++++.++.+++..-+ ..+.+..++++.+.+.+
T Consensus 201 ~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~ 273 (350)
T TIGR03537 201 FHSLSKRSGMTGYRSGFVAGDEKLISFLRKL-------RANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIE 273 (350)
T ss_pred EeecccccCCccccceeeecCHHHHHHHHHH-------HHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHH
Confidence 57999865458999999999988877632 111233444456665655553100 12234455555555555
Q ss_pred hHhhccCCCceeeEeee-eeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-------CCEEEEecCCCCC
Q 013204 347 GVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMSPPFIMS 418 (447)
Q Consensus 347 ~L~~l~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------g~~iR~~~~~~~t 418 (447)
.|++. ++ ...... |.++.+.++... ....+.+.|.++||.+.++ .+.+|++ +..+
T Consensus 274 ~l~~~---g~-~~~~~~g~~~~~~~~~~~~-----------~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~--~~~~ 336 (350)
T TIGR03537 274 FFNKV---GL-EYLYPDATFYLWVKVPSGI-----------DAKDYALRLLENGIVVAPGENFGSGEEGYVRVA--LVPT 336 (350)
T ss_pred HHHHC---CC-cccCCCeEEEEEEECCCCC-----------CHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEE--ecCC
Confidence 55553 22 122333 445566665321 1346888899999999864 2569999 4578
Q ss_pred HHHHHHHHHHHHH
Q 013204 419 PEEVDELISKYGK 431 (447)
Q Consensus 419 ~e~i~~~~~~l~~ 431 (447)
++++++++++|++
T Consensus 337 ~~~~~~~l~~~~~ 349 (350)
T TIGR03537 337 LEECEEALRLWER 349 (350)
T ss_pred HHHHHHHHHHHhc
Confidence 8999999998875
No 170
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.87 E-value=3.3e-19 Score=175.12 Aligned_cols=336 Identities=12% Similarity=0.097 Sum_probs=194.5
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCC-cccccCcCCChHHHHHHHHHHHhcC-cCCCC-eEEEeCChhhH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEA 107 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~-~v~~~~sGseA 107 (447)
.|+.++||..+ ++....++++.+++.+.+.... ..++...+..+....+++.+.+.+. ...++ .+++++|+++|
T Consensus 33 ~g~~~i~l~~g---~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~a 109 (394)
T PRK05942 33 QGLDLIDLGMG---NPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEG 109 (394)
T ss_pred cCCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHH
Confidence 36678999766 4444456678888777765321 1122212223344444554443322 13455 58889999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
+..++.... ..+++|++.+|+|.+........+. .. ..++.... . .+ .
T Consensus 110 l~~~~~~~~--------~~gd~Vlv~~P~y~~~~~~~~~~g~-~~------------~~v~~~~~-------~---~~-~ 157 (394)
T PRK05942 110 LTHLALAYV--------NPGDVVLVPSPAYPAHFRGPLIAGA-QI------------YPIILKPE-------N---DW-L 157 (394)
T ss_pred HHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHHcCC-EE------------EEeecCCc-------c---CC-c
Confidence 999888653 3457899999999887544333221 11 11111000 0 00 0
Q ss_pred HHHHHHHHHHHhhCCCcEEEEE-EccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-cc-ccCC-
Q 013204 188 RLANNLEDLILKEGPETIAAFI-AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC-DKYS- 263 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi-~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~~-~~~~- 263 (447)
.+++++++.+. + ++.+|+ +.|.|++| ...+.+.+++|.++|++||+++|+||+|..+...+... .. ...+
T Consensus 158 ~d~~~l~~~~~---~-~~k~i~l~~P~NPtG--~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~ 231 (394)
T PRK05942 158 IDLSSIPEEVA---Q-QAKILYFNYPSNPTT--ATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGA 231 (394)
T ss_pred cCHHHHHHhcc---c-cceEEEEcCCCCCCC--CcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCc
Confidence 11356666553 2 344455 44756555 55688999999999999999999999998764433211 11 1111
Q ss_pred --CCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHH
Q 013204 264 --IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNK 339 (447)
Q Consensus 264 --~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~ 339 (447)
....+-+|||.++.+++++|++++++++++.+... .....++.+.+++.++.++++..+ .++..+.+++
T Consensus 232 ~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 304 (394)
T PRK05942 232 KDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTL-------KTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRT 304 (394)
T ss_pred cccEEEEecchhccCChhhheeeeecCHHHHHHHHHH-------HhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 11223468998875448999999999999888632 111234445566666666665321 1234556666
Q ss_pred HHHHHHHhHhhccCCCceeeEeeeee-EEEEEeecCCCCCCCCCCCcchHHHHHHH-HHHcCceEEee-------CCEEE
Q 013204 340 IAPKFQDGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVS-------GDNIM 410 (447)
Q Consensus 340 ~~~~l~~~L~~l~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~-------g~~iR 410 (447)
+.+.+.+.|+++ ++ ....+.|. ++.+.+..... ...+..+ +.++||.+.++ .+.+|
T Consensus 305 ~~~~~~~~L~~~---~~-~~~~~~~~~f~~~~~~~~~~-----------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iR 369 (394)
T PRK05942 305 RRDFLIQGLGEL---GW-NIPPTKATMYLWVPCPVGMG-----------STDFALNVLQKTGVVVTPGNAFGEGGEGYVR 369 (394)
T ss_pred HHHHHHHHHHHC---CC-eecCCCeeeEEEEECCCCCC-----------HHHHHHHHHHHCCEEEeCChhhCcCCCCeEE
Confidence 666677766654 22 12233344 56666643211 2235544 55789998764 25799
Q ss_pred EecCCCCCHHHHHHHHHHHHH
Q 013204 411 MSPPFIMSPEEVDELISKYGK 431 (447)
Q Consensus 411 ~~~~~~~t~e~i~~~~~~l~~ 431 (447)
++. ..+.+.+.+++++|.+
T Consensus 370 is~--~~~~~~l~~~l~~l~~ 388 (394)
T PRK05942 370 ISL--IADCDRLGEALDRLKQ 388 (394)
T ss_pred EEe--cCCHHHHHHHHHHHHH
Confidence 995 4555666666665543
No 171
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.87 E-value=1.6e-19 Score=174.86 Aligned_cols=320 Identities=12% Similarity=0.021 Sum_probs=194.8
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC--cCCCCeEEEeCChhhHH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT--ASKMAKVFFTNSGSEAN 108 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~v~~~~sGseA~ 108 (447)
.+..++|+.++. +....+|.+.+++.+...... +....+..+...++++.+.+.+. +.+.+++++++|+++++
T Consensus 19 ~~~~~i~l~~~~---p~~~~~~~~~~~~~~~~~~~~--Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i 93 (357)
T TIGR03539 19 HPDGIVDLSVGT---PVDPVPPLIRAALAAAADAPG--YPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELV 93 (357)
T ss_pred CCCCeEEccCCC---CCCCCCHHHHHHHHHHHhhCC--CCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHH
Confidence 466789998874 323357888888877654321 22222334555566666655433 24678999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHH
Q 013204 109 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 188 (447)
Q Consensus 109 ~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (447)
..++.++. . ..++.|++.+++|.+........+... +.+++
T Consensus 94 ~~~~~~l~------~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~---------------~~v~~----------------- 134 (357)
T TIGR03539 94 AWLPTLLG------L-GPGDTVVIPELAYPTYEVGALLAGATP---------------VAADD----------------- 134 (357)
T ss_pred HHHHHHHc------C-CCCCEEEECCCCcHHHHHHHHhcCCEE---------------eccCC-----------------
Confidence 88777541 1 335789999999987754433222111 00100
Q ss_pred HHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccccc-cc--CC-C
Q 013204 189 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DK--YS-I 264 (447)
Q Consensus 189 ~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~-~~--~~-~ 264 (447)
.+.++ ++++++|+++..++.+| ...+.+.+++|.++|++||+++|.||+|..+...+..... .. .+ .
T Consensus 135 -~~~l~-------~~~~~~v~~~~p~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 205 (357)
T TIGR03539 135 -PTELD-------PVGPDLIWLNSPGNPTG-RVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGD 205 (357)
T ss_pred -hhhcC-------ccCccEEEEeCCCCCcC-ccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCc
Confidence 02111 12345555554444444 4567788999999999999999999999877544432111 10 01 1
Q ss_pred CCC-ee--eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHH
Q 013204 265 KPD-LV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKI 340 (447)
Q Consensus 265 ~~d-~v--~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~ 340 (447)
... ++ +|||.++.+++++|++++++++++.+... .....++.+.+++.++.++|+... .......++++
T Consensus 206 ~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 278 (357)
T TIGR03539 206 HTGLLAVHSLSKRSNLAGYRAGFVAGDPALVAELLTV-------RKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAAR 278 (357)
T ss_pred cccEEEEeccccccCCCceeEEEEecCHHHHHHHHHH-------HhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 112 33 68998865449999999999988877532 122345567777777777664211 12234555566
Q ss_pred HHHHHHhHhhccCCCceeeEeeeee-EEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-------CEEEEe
Q 013204 341 APKFQDGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNIMMS 412 (447)
Q Consensus 341 ~~~l~~~L~~l~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-------~~iR~~ 412 (447)
.+.+.+.|++. ... ...+.|. ++.+.+.. . ...+.+.|.++||.+.++. +.+|++
T Consensus 279 ~~~~~~~L~~~-g~~---~~~p~~~~~~~~~~~~-~------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis 341 (357)
T TIGR03539 279 RAQLKPALEKA-GFR---IDHSEAGLYLWATRGE-D------------AWDTVDRLAELGILVAPGDFYGPAGSQHVRVA 341 (357)
T ss_pred HHHHHHHHHHc-CCC---CcCCCccEEEEEECCC-C------------HHHHHHHHHhCCEEECCccccCCCCCCeEEEE
Confidence 66666666654 211 1223344 44444321 1 3357788899999998752 569999
Q ss_pred cCCCCCHHHHHHHHHHH
Q 013204 413 PPFIMSPEEVDELISKY 429 (447)
Q Consensus 413 ~~~~~t~e~i~~~~~~l 429 (447)
+..++++|++++++|
T Consensus 342 --~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 342 --LTATDERIAAAVARL 356 (357)
T ss_pred --ecCCHHHHHHHHHhh
Confidence 556889999999876
No 172
>PRK07777 aminotransferase; Validated
Probab=99.87 E-value=4.3e-19 Score=173.97 Aligned_cols=339 Identities=14% Similarity=0.084 Sum_probs=196.4
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-cCCCC-eEEEeCChhhHHHHH
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEANDTQ 111 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~-~v~~~~sGseA~~~A 111 (447)
.++|+..+..... .++.+.+++.+.+......+....+.......+++.+.+.+. ...++ ++++++||++|+..+
T Consensus 25 ~~i~l~~g~p~~~---~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 101 (387)
T PRK07777 25 GAVNLGQGFPDED---GPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAA 101 (387)
T ss_pred CeEEccCCCCCCC---CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH
Confidence 5788877753322 357788887777654222222212233334444444444432 12333 699999999999998
Q ss_pred HHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHH
Q 013204 112 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191 (447)
Q Consensus 112 l~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (447)
+.... .++++|++..+.|++........+.... .+++.+. +. .+ ..+++
T Consensus 102 ~~~~~--------~~gd~vli~~p~y~~~~~~~~~~g~~~~-------------~~~~~~~------~~---~~-~~d~~ 150 (387)
T PRK07777 102 VLGLV--------EPGDEVLLIEPYYDSYAAVIAMAGAHRV-------------PVPLVPD------GR---GF-ALDLD 150 (387)
T ss_pred HHHhc--------CCCCEEEEeCCCchhhHHHHHHCCCEEE-------------EeecCCc------cC---CC-cCCHH
Confidence 87542 3347899999999877533332221110 1111000 00 00 01136
Q ss_pred HHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-ccc-cCCCCCC-e
Q 013204 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCD-KYSIKPD-L 268 (447)
Q Consensus 192 ~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~~~-~~~~~~d-~ 268 (447)
++++.+. + ++.+|++++.++.+|. ..+.+.+++|.++|++|++++|+||+|.++...+..+ ... ..+...+ +
T Consensus 151 ~l~~~~~---~-~~~~v~l~~p~NPtG~-~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i 225 (387)
T PRK07777 151 ALRAAVT---P-RTRALIVNSPHNPTGT-VLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTV 225 (387)
T ss_pred HHHHhcC---c-ccEEEEEcCCCCCCCc-cCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEE
Confidence 6666553 2 3445555555555664 4478899999999999999999999998775433211 111 1122112 2
Q ss_pred --eeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHHHHHH
Q 013204 269 --VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAPKF 344 (447)
Q Consensus 269 --v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~~~~l 344 (447)
.+|||.++.+++++|++++++++++.+... ....++..+.+.+.++..+++..+ .+...+.++++.+.+
T Consensus 226 ~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l 298 (387)
T PRK07777 226 TISSAAKTFNVTGWKIGWACGPAPLIAAVRAA-------KQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRL 298 (387)
T ss_pred EEeechhhccCcCceeEEEecCHHHHHHHHHH-------HhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 358999985448999999999988877632 121234334444444444443211 123456667777777
Q ss_pred HHhHhhccCCCceeeEeeeee-EEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeC----------CEEEEe
Q 013204 345 QDGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG----------DNIMMS 412 (447)
Q Consensus 345 ~~~L~~l~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g----------~~iR~~ 412 (447)
.+.|+++ ... ...+.|. ++.+.+...... ....+.+.|+ ++||.+.++. +.+|++
T Consensus 299 ~~~L~~~-~~~---~~~~~g~~~~~~~~~~~~~~---------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~ 365 (387)
T PRK07777 299 AAGLAEA-GFE---VHDSAGTYFLCADPRPLGYD---------DGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFA 365 (387)
T ss_pred HHHHHhC-CCC---ccCCCcceEEEecccccCCC---------CHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEE
Confidence 7777664 222 1223333 444554321100 1346888886 5799997652 369999
Q ss_pred cCCCCCHHHHHHHHHHHHHHH
Q 013204 413 PPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 413 ~~~~~t~e~i~~~~~~l~~~l 433 (447)
+..+++++++++++|.+..
T Consensus 366 --~~~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 366 --FCKRDDTLDEAIRRLRALR 384 (387)
T ss_pred --ecCCHHHHHHHHHHHHHHh
Confidence 5568999999999997654
No 173
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.87 E-value=2.3e-19 Score=176.08 Aligned_cols=341 Identities=15% Similarity=0.125 Sum_probs=199.3
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhhHHHHH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQ 111 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGseA~~~A 111 (447)
..++||..+. ..++. ++.+.+++.+.+......+....+..+....+++.+.+.+. ...++++++++|+++|+..+
T Consensus 33 ~~~i~l~~~~--~~~~~-~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 109 (391)
T PRK08361 33 ENVISLGIGE--PDFDT-PKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLA 109 (391)
T ss_pred cCeEEcCCCC--CCCCC-CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHH
Confidence 4578887664 33443 67888888887765322221112233333344444433322 24567999999999999999
Q ss_pred HHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHH
Q 013204 112 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191 (447)
Q Consensus 112 l~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (447)
++... ..++.|++.+++|.+....... .|... ..++...... + ..+++
T Consensus 110 ~~~l~--------~~g~~Vlv~~p~y~~~~~~~~~-~g~~~------------~~v~~~~~~~----------~-~~d~~ 157 (391)
T PRK08361 110 FESLL--------EEGDEVIIPDPAFVCYVEDAKI-AEAKP------------IRIPLREENE----------F-QPDPD 157 (391)
T ss_pred HHHhc--------CCCCEEEEcCCCCcccHHHHHH-cCCEE------------EEEecCCccC----------C-CCCHH
Confidence 88663 2347899999999776543332 22111 1111110000 0 01136
Q ss_pred HHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccc-cccccCCCCCCee-
Q 013204 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDKYSIKPDLV- 269 (447)
Q Consensus 192 ~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~-~~~~~~~~~~d~v- 269 (447)
++++.+. ++...++++.|.|+ +| ...+.+.+++|.++|+++++++|+||+|..+...+.. ..........+++
T Consensus 158 ~l~~~i~---~~~~~v~i~~p~NP-tG-~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~ 232 (391)
T PRK08361 158 ELLELIT---KRTRMIVINYPNNP-TG-ATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILA 232 (391)
T ss_pred HHHHhcc---cccEEEEEeCCCCC-CC-cCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEE
Confidence 6666654 22334445556454 45 4557788999999999999999999999876433221 1111111112233
Q ss_pred -eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh----hcHHHHHHHHHHHH
Q 013204 270 -SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE----RNIVEQVNKIAPKF 344 (447)
Q Consensus 270 -~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~----~~~~~~~~~~~~~l 344 (447)
++||.++..++++|++++++++++.+... ....+++.+.+.+.++.++|+.-.. ++..+.++++.+.+
T Consensus 233 ~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 305 (391)
T PRK08361 233 NSFSKTFAMTGWRLGFVIAPEQVIKDMIKL-------HAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLV 305 (391)
T ss_pred ecCchhcCCcHhhhhhhccCHHHHHHHHHH-------HhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHH
Confidence 58999874448999999999988876531 1112344566667766666642111 22334445555555
Q ss_pred HHhHhhccCCCceeeEeeee-eEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeC-------CEEEEecCC
Q 013204 345 QDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-------DNIMMSPPF 415 (447)
Q Consensus 345 ~~~L~~l~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g-------~~iR~~~~~ 415 (447)
.+.|+++ +.+......| .++.+.+..... ....+.+.|+ ++||.+.++. +.+|++ +
T Consensus 306 ~~~L~~~---~~~~~~~p~g~~~~~~~l~~~~~----------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~ 370 (391)
T PRK08361 306 LKRLKEM---PHIKVFEPKGAFYVFANIDETGM----------SSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRIS--Y 370 (391)
T ss_pred HHHHHhC---CCCeecCCCEEEEEEEECCCCCC----------CHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEE--e
Confidence 6666554 2223333444 445556642111 1335677776 5799998741 469999 5
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 013204 416 IMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 416 ~~t~e~i~~~~~~l~~~l~~ 435 (447)
..+++++++++++|++.+++
T Consensus 371 ~~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 371 ATSKEKLIEAMERMEKALEE 390 (391)
T ss_pred cCCHHHHHHHHHHHHHHHhc
Confidence 56888999999999888754
No 174
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.87 E-value=9.8e-19 Score=172.19 Aligned_cols=337 Identities=17% Similarity=0.203 Sum_probs=198.9
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC----cCCCCeEEEeCChhhH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT----ASKMAKVFFTNSGSEA 107 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~~~v~~~~sGseA 107 (447)
|..++||..+. ..++ .++.+.+++.+.......+ . +.....++.+.+++++. +.+.+++++++|+++|
T Consensus 29 ~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y-~----~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~a 100 (397)
T PRK07568 29 GIKVYHLNIGQ--PDIK-TPEVFFEAIKNYDEEVLAY-S----HSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEA 100 (397)
T ss_pred CCCEEEecCCC--CCCC-CCHHHHHHHHHHhcCCcCc-C----CCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHH
Confidence 44578886664 2233 3678888877655432212 1 12223444444444431 2466799999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
+..++.... ..+++|++.++.|......... .|... ..++..... + +..
T Consensus 101 l~~~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~-~g~~~------------~~v~~~~~~-----g-----~~~ 149 (397)
T PRK07568 101 ILFAMMAIC--------DPGDEILVPEPFYANYNGFATS-AGVKI------------VPVTTKIEE-----G-----FHL 149 (397)
T ss_pred HHHHHHHhc--------CCCCEEEEecCCCccHHHHHHH-cCCEE------------EEeecCccc-----C-----CCC
Confidence 999887653 2347899989988765432222 12111 111110000 0 000
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-c-cccCCCC
Q 013204 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G-CDKYSIK 265 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~-~~~~~~~ 265 (447)
.+++++++.+. ++...++++.|.|++ | ...+.+.+++|.++|+++|+++|+||+|.+|...+... . ....+..
T Consensus 150 ~~~~~l~~~~~---~~~~~v~i~~p~NPt-G-~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~ 224 (397)
T PRK07568 150 PSKEEIEKLIT---PKTKAILISNPGNPT-G-VVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLE 224 (397)
T ss_pred CCHHHHHHhcC---ccceEEEEECCCCCC-C-ccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCc
Confidence 01255666553 233344455665555 4 45677889999999999999999999999885554321 1 1222223
Q ss_pred CCee---eecccCCCcccceeEEEeC-hhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHH
Q 013204 266 PDLV---SFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNK 339 (447)
Q Consensus 266 ~d~v---~~sK~l~gg~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~ 339 (447)
+.++ +|||.++..++++|+++++ +++++.+... .. .+++.+.+++.++.++++..+ -+++.+.+++
T Consensus 225 ~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~-------~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 296 (397)
T PRK07568 225 DRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKL-------CQ-ARLSPPTLEQIGAAALLDTPESYFDEVREEYKK 296 (397)
T ss_pred CCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHH-------hh-ccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 3444 6899998634899999985 6787766421 11 134556667776666665211 1234455666
Q ss_pred HHHHHHHhHhhccCCCceeeEeeeee-EEEEEeecCCCCCCCCCCCcchHHHHHHHHHH------cCceEEee-------
Q 013204 340 IAPKFQDGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK------HGMLVRVS------- 405 (447)
Q Consensus 340 ~~~~l~~~L~~l~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~Gi~~~~~------- 405 (447)
+.+.+.+.|+++ +.+....+.|. ++.+.+.... ...+.+.|++ +||.+.++
T Consensus 297 ~~~~l~~~L~~~---~~~~~~~p~g~~~~~~~l~~~~------------~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~ 361 (397)
T PRK07568 297 RRDILYEELNKI---PGVVCEKPKGAFYIIAKLPVDD------------AEDFAKWLLTDFNYNGETVMVAPASGFYATP 361 (397)
T ss_pred HHHHHHHHHhcC---CCceecCCCcceEEEEecCCCC------------HHHHHHHHHhhcccccceEEEeCchHhcCCC
Confidence 666676666654 22222334444 4556654311 3346666664 58998864
Q ss_pred ---CCEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 406 ---GDNIMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 406 ---g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
.+.+|++ +..+++++++++++|.+++++..
T Consensus 362 ~~~~~~iRls--~~~~~~~~~~~~~~l~~~l~~~~ 394 (397)
T PRK07568 362 GLGKNEIRIA--YVLNEEDLKRAMEILKEALEKYN 394 (397)
T ss_pred CCCCCeEEEE--EeCCHHHHHHHHHHHHHHHHHhh
Confidence 1469999 55788999999999999887644
No 175
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.87 E-value=5e-20 Score=170.07 Aligned_cols=279 Identities=14% Similarity=0.115 Sum_probs=178.6
Q ss_pred CHHHHHHHHHHHhcC-CcccccCcCCChHHHHHHHHHHHhcCc--CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCc
Q 013204 51 EPRLVAAATAQLNTL-PFYHSFWNRTTKPSLDLAKELLEMFTA--SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 127 (447)
Q Consensus 51 ~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~ 127 (447)
+..|.+++++.+... ...++...+.......|++++...+.. ...++|++++|+.+|+..++.... ..+
T Consensus 46 P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~--------~~G 117 (420)
T KOG0257|consen 46 PKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLL--------NPG 117 (420)
T ss_pred cHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHc--------CCC
Confidence 446778888888763 222222234566677777887775532 355689999999999999988765 456
Q ss_pred ceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEE
Q 013204 128 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAA 207 (447)
Q Consensus 128 ~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~ 207 (447)
+.||+++|.|..+.......++.+.+...- ..... ...+ .|. .+.+++|..+. +++.++
T Consensus 118 DeVii~eP~fd~Y~~~~~maG~tpv~v~~~-~~~g~-~~s~---~~~-------------~D~~~le~~~t---~kTk~I 176 (420)
T KOG0257|consen 118 DEVIVFEPFFDCYIPQVVMAGGTPVFVPLK-PKEGN-VSSS---DWT-------------LDPEELESKIT---EKTKAI 176 (420)
T ss_pred CEEEEecCcchhhhhHHhhcCCcceeeccc-ccccc-ccCc---ccc-------------CChHHHHhhcc---CCccEE
Confidence 999999999999988888888776654322 11111 0001 111 11377887776 345567
Q ss_pred EEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc---ccccccCCCCCC---eeeecccCCCcccc
Q 013204 208 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT---MFGCDKYSIKPD---LVSFAKALSSAYMP 281 (447)
Q Consensus 208 vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~---~~~~~~~~~~~d---~v~~sK~l~gg~~~ 281 (447)
+++.|.|+.| .+.+++.|++|+++|++||+++|+||||.-+-..|. .++.. .|+... +-.+||.++--+|+
T Consensus 177 i~ntPhNPtG--kvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~asl-Pgm~ertitvgS~gKtf~~TGWr 253 (420)
T KOG0257|consen 177 ILNTPHNPTG--KVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASL-PGMYERTITVGSFGKTFGVTGWR 253 (420)
T ss_pred EEeCCCCCcC--cccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecC-CchhheEEEeccccceeeeeeee
Confidence 7777777776 677999999999999999999999999987766664 22222 333322 33578977653499
Q ss_pred eeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh----------hhcHHHHHHHHHHHHHHhHhhc
Q 013204 282 IGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK----------ERNIVEQVNKIAPKFQDGVKAF 351 (447)
Q Consensus 282 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~----------~~~~~~~~~~~~~~l~~~L~~l 351 (447)
+|++++++.++...... ..-..+..+...+.|..+++..-. ..++...++++++.+.+.|+++
T Consensus 254 lGW~igp~~L~~~~~~v-------h~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l 326 (420)
T KOG0257|consen 254 LGWAIGPKHLYSALFPV-------HQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL 326 (420)
T ss_pred eeeeechHHhhhhHHHH-------hhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999988887776531 122233333223333333332211 1235567788888888888887
Q ss_pred cCCCceeeEeeeee-EEEEEee
Q 013204 352 SDSPIIGEIRGTGL-ILGTEFA 372 (447)
Q Consensus 352 ~~~~~~~~~~~~g~-~~~i~~~ 372 (447)
+.++ .-++|. ++..++.
T Consensus 327 -g~~v---~~p~gayyl~adfs 344 (420)
T KOG0257|consen 327 -GLKV---TGPEGAYYLWADFS 344 (420)
T ss_pred -CCcc---ccCCCceEEEEecc
Confidence 3332 223444 4455665
No 176
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.87 E-value=6.2e-19 Score=173.63 Aligned_cols=342 Identities=13% Similarity=0.099 Sum_probs=201.8
Q ss_pred CCEEEecCCccccc--cCCCCCHHHHHHHHHHHhcCCc-ccccCcCCChHHHHHHHHHHHhcC----cCCCCeEEEeCCh
Q 013204 32 GKKYLDSLAGLWCT--ALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFT----ASKMAKVFFTNSG 104 (447)
Q Consensus 32 g~~~lD~~~~~~~~--~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~----~~~~~~v~~~~sG 104 (447)
|+.++++..+.... .++ .++.+.+++.+.+..... .+. +.....++.+.+++++. ....+++++++|+
T Consensus 30 ~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~----~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~ 104 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLP-TDPEVMQAMKDSLDSGKYNGYA----PTVGALSAREAIASYYHNPDGPIEADDVVLCSGC 104 (401)
T ss_pred CCCeeecCCCCCCCcCCCC-CCHHHHHHHHHHHhccCCCCCC----CCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcCh
Confidence 57889987764321 244 478899998887765211 121 22233455555555542 1356789999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhH
Q 013204 105 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 184 (447)
Q Consensus 105 seA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (447)
++|+..++.... .+++.|++.+|+|..+.......+. .. ..++++....
T Consensus 105 ~~al~~~~~~l~--------~~gd~v~i~~P~y~~~~~~~~~~g~-~v------------~~~~~~~~~~---------- 153 (401)
T TIGR01264 105 SHAIEMCIAALA--------NAGQNILVPRPGFPLYETLAESMGI-EV------------KLYNLLPDKS---------- 153 (401)
T ss_pred HHHHHHHHHHhC--------CCCCEEEEeCCCChhHHHHHHHcCC-EE------------EEeecCCccC----------
Confidence 999999998663 2346899999999776543332221 11 0111100000
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCC
Q 013204 185 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI 264 (447)
Q Consensus 185 ~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~ 264 (447)
+ ..+++.+++.+. .+...++++.|.|++| ...+.+.+++|.++|+++|+++|+||+|.+|...+..+. ....+
T Consensus 154 ~-~~d~~~l~~~~~---~~~~~v~~~~p~NPtG--~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~~ 226 (401)
T TIGR01264 154 W-EIDLKQLESLID---EKTAALIVNNPSNPCG--SVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFE-PLASL 226 (401)
T ss_pred C-CCCHHHHHHHhc---cCceEEEEcCCCCCCC--CCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccc-cHHHc
Confidence 0 001356666553 2233344455655554 355788999999999999999999999998755443211 11112
Q ss_pred CCC--ee---eecccCCCcccceeEEEeCh------hHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh---
Q 013204 265 KPD--LV---SFAKALSSAYMPIGAILVSP------EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--- 330 (447)
Q Consensus 265 ~~d--~v---~~sK~l~gg~~~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~--- 330 (447)
.++ ++ +|||.++.+++|+|++++++ ++++.+.. +.. ..+..+++++.++.+.|+...+
T Consensus 227 ~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~q~a~~~~l~~~~~~~l 298 (401)
T TIGR01264 227 SSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVK-------LSQ-RILGPCTIVQGALPSILLRTPQEYF 298 (401)
T ss_pred CCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHH-------Hhh-ccCCCCcHHHHHHHHHHHhCcHHHH
Confidence 222 33 58998666559999999864 34444431 111 1344566777777776653111
Q ss_pred hcHHHHHHHHHHHHHHhHhhccCCCceee-EeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeC--
Q 013204 331 RNIVEQVNKIAPKFQDGVKAFSDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-- 406 (447)
Q Consensus 331 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g-- 406 (447)
++..+.++++.+.+.+.|+++. .+.. .+..|.++.+.+.....+.. . ....+.+.++ ++||++.++.
T Consensus 299 ~~~~~~~~~~r~~l~~~L~~~~---~~~~~~p~~g~f~~~~~~~~~~~~~--~----~~~~~~~~l~~~~gI~v~pg~~f 369 (401)
T TIGR01264 299 DGTLSVLESNAMLCYGALAAVP---GLRPVMPSGAMYMMVGIEMEHFPEF--K----NDVEFTERLVAEQSVFCLPGSCF 369 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---CCcccCCCeeeEEEEEecccccCCC--C----CHHHHHHHHHHhCCEEEeCchhc
Confidence 2234455555566666666542 1222 23456677777653210000 0 1345667765 7899998753
Q ss_pred ---CEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 407 ---DNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 407 ---~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
+.+|++ +..+++++++++++|.+.+++
T Consensus 370 ~~~~~iRis--~~~~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 370 EYPGFFRVV--LTVPVVMMEEACSRIQEFCER 399 (401)
T ss_pred CCCCeEEEE--EcCCHHHHHHHHHHHHHHHhc
Confidence 579999 566899999999999988764
No 177
>PRK08912 hypothetical protein; Provisional
Probab=99.87 E-value=5.1e-19 Score=173.46 Aligned_cols=339 Identities=14% Similarity=0.111 Sum_probs=201.8
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-cCCCC-eEEEeCChhhHHHH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEANDT 110 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~-~v~~~~sGseA~~~ 110 (447)
...+||..+... ++ .+|++.+++.+.+......+....+..+....+++.+.+.+. ...++ ++++++|+++|+..
T Consensus 26 ~~~i~l~~g~p~--~~-~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 102 (387)
T PRK08912 26 HGAINLGQGFPD--DP-GPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAA 102 (387)
T ss_pred CCeEEccCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHH
Confidence 457888877532 33 478888888877654222222222233444445555444332 23555 89999999999988
Q ss_pred HHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCC-cccCCCCCCChhHHHHHH
Q 013204 111 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRL 189 (447)
Q Consensus 111 Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 189 (447)
++.... .+++.|++.+++|..........+.. . ..++++. .+. .+
T Consensus 103 ~~~~~~--------~~gd~Vlv~~p~y~~~~~~~~~~g~~-~------------~~~~~~~~~~~-------------~~ 148 (387)
T PRK08912 103 ALLALV--------EPGDEVVLFQPLYDAYLPLIRRAGGV-P------------RLVRLEPPHWR-------------LP 148 (387)
T ss_pred HHHHhc--------CCCCEEEEeCCCchhhHHHHHHcCCE-E------------EEEecCcccCc-------------CC
Confidence 888653 23478999999998775444332211 1 1111110 000 01
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc--ccccCCCCC-
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF--GCDKYSIKP- 266 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~--~~~~~~~~~- 266 (447)
++++++.+. ++...++++.|.|++| ...+.+.+++|.++|++|++++|+||+|..+...+..+ .....+...
T Consensus 149 ~~~l~~~~~---~~~~~v~l~~p~NPtG--~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 223 (387)
T PRK08912 149 RAALAAAFS---PRTKAVLLNNPLNPAG--KVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRER 223 (387)
T ss_pred HHHHHHHhC---ccceEEEEeCCCCCcC--cccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCc
Confidence 366666654 2334455566656555 45577889999999999999999999998664333211 112222222
Q ss_pred Cee--eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHHHH
Q 013204 267 DLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAP 342 (447)
Q Consensus 267 d~v--~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~~~ 342 (447)
+++ ++||.++-+++++|++++++++++.+... .....++.++..+.++.+++.... -++..+.++++.+
T Consensus 224 ~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 296 (387)
T PRK08912 224 TVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKA-------HQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRD 296 (387)
T ss_pred eEEEeechhhccCcCceeEEEecCHHHHHHHHHH-------HhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 233 57999883338999999999998887632 111234445555555555553111 1234566666777
Q ss_pred HHHHhHhhccCCCceeeEeeee-eEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeC---------CEEEE
Q 013204 343 KFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG---------DNIMM 411 (447)
Q Consensus 343 ~l~~~L~~l~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g---------~~iR~ 411 (447)
.+.+.|+.+ +.. .....| .++.+.+....... ....+.+.|+ ++||.+.++. +.+|+
T Consensus 297 ~l~~~L~~~-g~~---~~~~~g~~~l~~~l~~~~~~~--------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl 364 (387)
T PRK08912 297 RLAAGLRRI-GFP---VLPSQGTYFLTVDLAPLGLAE--------DDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRF 364 (387)
T ss_pred HHHHHHHhC-CCc---ccCCCcceEEEecccccCCCC--------CHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEE
Confidence 777777664 222 222333 45556665311000 1345777765 5799988741 46999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHH
Q 013204 412 SPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 412 ~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
+ +..+++.+++++++|.+.++
T Consensus 365 ~--~~~~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 365 C--FAKRDATLDEAVERLAAARR 385 (387)
T ss_pred E--EeCCHHHHHHHHHHHHHHHh
Confidence 9 55679999999999988775
No 178
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.86 E-value=6.8e-19 Score=173.74 Aligned_cols=356 Identities=12% Similarity=0.058 Sum_probs=206.5
Q ss_pred cEEEeCCCCEEEecCCcccccc--CCCCCHHHHHHHHHHHhcCC-cccccCcCCChHHHHHHHHHHHhcC-------cCC
Q 013204 25 SYVYDVNGKKYLDSLAGLWCTA--LGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-------ASK 94 (447)
Q Consensus 25 ~~~~d~dg~~~lD~~~~~~~~~--lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~-------~~~ 94 (447)
..+.+..|+.++||..+..... +- .++.+.+++.+.+.... ..|+...+..+....+++.+.+.+. ..+
T Consensus 25 ~~~~~~~~~~~i~l~~g~p~~~~~~~-p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~ 103 (412)
T PTZ00433 25 NAKPSPSPKSIIKLSVGDPTLDGNLL-TPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIK 103 (412)
T ss_pred hhccCCCCCCeeecCCcCCCCcCCCC-CCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCC
Confidence 3445568899999987743210 22 46788888888776421 1122111223333334444433211 145
Q ss_pred CCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCccc
Q 013204 95 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 174 (447)
Q Consensus 95 ~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (447)
++++++++|+++|+..+++... .+++.|++.+|+|..+.......+... ..++.....
T Consensus 104 ~~~i~it~G~~~al~~~~~~~~--------~~gd~vlv~~P~y~~~~~~~~~~g~~~-------------~~i~~~~~~- 161 (412)
T PTZ00433 104 KDNVVLCSGVSHAILMALTALC--------DEGDNILVPAPGFPHYETVCKAYGIEM-------------RFYNCRPEK- 161 (412)
T ss_pred hhhEEEeCChHHHHHHHHHHhc--------CCCCEEEEccCCcccHHHHHHHcCCEE-------------EEEecCccc-
Confidence 6899999999999999998763 334789999999988754443322211 111110000
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccc
Q 013204 175 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 254 (447)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g 254 (447)
.+ ..+++++++.+. ++...++++.|.|++| ...+.+.+++|.++|++||+++|.||+|.+|...+
T Consensus 162 ---------~~-~~d~~~l~~~~~---~~~~~i~~~~p~NPtG--~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~ 226 (412)
T PTZ00433 162 ---------DW-EADLDEIRRLVD---DRTKALIMTNPSNPCG--SNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNG 226 (412)
T ss_pred ---------cC-cCCHHHHHHHhc---cCceEEEEeCCCCCCC--cccCHHHHHHHHHHHHHcCCeEEEeccccccccCC
Confidence 00 011356666554 2233445556655555 45578899999999999999999999999875443
Q ss_pred ccc-ccccCC-CCCCee--eecccCCCcccceeEEEe------ChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHH
Q 013204 255 TMF-GCDKYS-IKPDLV--SFAKALSSAYMPIGAILV------SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA 324 (447)
Q Consensus 255 ~~~-~~~~~~-~~~d~v--~~sK~l~gg~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~ 324 (447)
..+ ....+. -.+-++ +|||.++.+++|+|++++ .+++++.+... . ...++.+++++.++.+.
T Consensus 227 ~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~-------~-~~~~~~~~~~q~a~~~~ 298 (412)
T PTZ00433 227 ATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRL-------G-MLVCGPCSVVQAALGEA 298 (412)
T ss_pred CCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHH-------h-hccCCCChHHHHHHHHH
Confidence 221 111111 112232 589998655599999996 24566665421 1 12345677777777666
Q ss_pred HHHH---hhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeee-eeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcC
Q 013204 325 LKIY---KERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHG 399 (447)
Q Consensus 325 l~~~---~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G 399 (447)
++.- .-++..+.++++.+.+.+.|++. ..+...... |.++.+.+....... . .....+.+.|+ ++|
T Consensus 299 l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---~~~~~~~p~gg~f~~~~l~~~~~~~--~----~~~~~~~~~ll~~~g 369 (412)
T PTZ00433 299 LLNTPQEHLEQIVAKLEEGAMVLYNHIGEC---IGLSPTMPRGSMFLMSRLDLEKFRD--I----KSDVEFYEKLLEEEN 369 (412)
T ss_pred HhcCcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCcccCCCeeEEEEEEechhhcCC--C----CCHHHHHHHHHHhcC
Confidence 6521 01223344555555555555543 112223343 556666665321000 0 01345777877 579
Q ss_pred ceEEeeC-----CEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 400 MLVRVSG-----DNIMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 400 i~~~~~g-----~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
|.+.++. +.+|++ +...++++++++++|.++++..+
T Consensus 370 V~v~pg~~f~~~~~iRis--~~~~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 370 VQVLPGEIFHMPGFTRLT--ISRPVEVLREAVERIKAFCERHK 410 (412)
T ss_pred EEEeCccccCCCCeEEEE--ecCCHHHHHHHHHHHHHHHHHhc
Confidence 9998763 579999 55678999999999999887544
No 179
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.86 E-value=8.4e-19 Score=171.82 Aligned_cols=340 Identities=14% Similarity=0.093 Sum_probs=203.7
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHHHhcCCc-ccccCcCCChHHHHHHHHHHHhcCc-CC-CCeEEEeCChhhHHHH
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTA-SK-MAKVFFTNSGSEANDT 110 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~-~~-~~~v~~~~sGseA~~~ 110 (447)
..+|+..|. ..+. .++.+.+++.+.+..... .+....+..+....+++.+.+.+.. .. .+.+++++|+++++..
T Consensus 28 ~~~~l~~g~--~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~ 104 (389)
T PRK05957 28 GTISLGQGV--VSYP-PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104 (389)
T ss_pred CeEEccCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence 357776554 2344 577888998887654321 2222334455666777777766532 12 5689999999999988
Q ss_pred HHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHH
Q 013204 111 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190 (447)
Q Consensus 111 Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (447)
++.... .+++.|++.+|.|......... .|... ..++..+.+. .++
T Consensus 105 ~~~~~~--------~~gd~Vlv~~P~y~~~~~~~~~-~g~~~------------~~v~~~~~~~-------------~d~ 150 (389)
T PRK05957 105 AILAIT--------DPGDEIILNTPYYFNHEMAITM-AGCQP------------ILVPTDDNYQ-------------LQP 150 (389)
T ss_pred HHHHhc--------CCCCEEEEeCCCCcCHHHHHHh-cCCEE------------EEeecCCCCC-------------cCH
Confidence 887653 3347889889998665433222 22111 1111111000 113
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-c-cccCCCCCC-
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G-CDKYSIKPD- 267 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~-~~~~~~~~d- 267 (447)
+++++.+. ++...++++.| ++.+| ...+.+.+++|.++|++||+++|+||+|..+...+... . ....+....
T Consensus 151 ~~l~~~i~---~~~klv~~~~p-~NPtG-~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 225 (389)
T PRK05957 151 EAIEQAIT---PKTRAIVTISP-NNPTG-VVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHT 225 (389)
T ss_pred HHHHHhcC---cCceEEEEeCC-CCCCC-cCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcE
Confidence 66776654 23334444555 44455 45577889999999999999999999998774433211 1 111122222
Q ss_pred --eeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHHHHHHHHH
Q 013204 268 --LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAPK 343 (447)
Q Consensus 268 --~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~~~~~~~~ 343 (447)
+-+|||.++.+++++|++++++++++.+... ......+.+.+++.++..+|+.-. -++..+.++++.+.
T Consensus 226 i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~ 298 (389)
T PRK05957 226 ISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKI-------QDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQI 298 (389)
T ss_pred EEEecchhhccCccceeEEEecCHHHHHHHHHH-------HhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 3368999875448999999999999888642 111233445566666666664210 12233455666666
Q ss_pred HHHhHhhccCCCceeeEeee-eeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeC-------CEEEEecC
Q 013204 344 FQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-------DNIMMSPP 414 (447)
Q Consensus 344 l~~~L~~l~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g-------~~iR~~~~ 414 (447)
+.+.|+++... ....... |.++.+.+.... ....+.++|+ ++||.+.++. +.+|++..
T Consensus 299 l~~~L~~~~~~--~~~~~~~gg~~~~~~~~~~~-----------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~ 365 (389)
T PRK05957 299 LLKSLGQLQDR--CTLHPANGAFYCFLKVNTDL-----------NDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYG 365 (389)
T ss_pred HHHHHHhcCCC--ccccCCCeeEEEEEeCCCCC-----------ChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEe
Confidence 66666654211 1112233 455566654321 1345778876 5899999752 36999943
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q 013204 415 FIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 415 ~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
..+++++++++++|.+.++++
T Consensus 366 -~~~~~~l~~~~~~l~~~~~~~ 386 (389)
T PRK05957 366 -ALQKATAKEGIERLVQGLKTI 386 (389)
T ss_pred -cCCHHHHHHHHHHHHHHHHhh
Confidence 358999999999998887663
No 180
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.86 E-value=2e-19 Score=172.50 Aligned_cols=306 Identities=15% Similarity=0.116 Sum_probs=197.8
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 112 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al 112 (447)
.+++||+++- +++|...+.+.. ..+.. .+... .+|.+.+++.+.-...++|++++|+++++....
T Consensus 24 ~~~i~ls~Ne--np~~~~~~~~~~---~~~~~---------Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~ 88 (339)
T PRK06959 24 DAWLDLSTGI--NPHGYPVPPVPA---DAWRR---------LPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALP 88 (339)
T ss_pred hhhceeccCC--CCCCCCCCCCCH---HHHHh---------CCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHH
Confidence 5789998887 888865333321 12222 13333 789999999875434579999999999987554
Q ss_pred HHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHH
Q 013204 113 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 192 (447)
Q Consensus 113 ~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (447)
.+. .+ ..|++.+|+|.++.......+.... .++.. . +.
T Consensus 89 ~~~---------~~-g~v~v~~P~y~~y~~~~~~~g~~~~-------------~v~~~-------------~------~~ 126 (339)
T PRK06959 89 ALL---------PR-GRVGIAPLAYSEYAPAFARHGHRVV-------------PLDEA-------------A------DT 126 (339)
T ss_pred Hhc---------CC-CeEEEcCCCcHHHHHHHHHCCCEEE-------------eeccc-------------c------hh
Confidence 332 22 2488899999887655543322110 01110 0 11
Q ss_pred HHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee---
Q 013204 193 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--- 269 (447)
Q Consensus 193 le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v--- 269 (447)
+.+ ....+++++|.|++| ...+.+.++++.+.|+++++++|+||+|..|... .. ...... .++++
T Consensus 127 ~~~-------~~~~v~l~nPnNPTG--~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~-~s-~~~~~~-~~~vi~l~ 194 (339)
T PRK06959 127 LPA-------ALTHLIVVNPNNPTA--ERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA-AS-LAAHTD-RPGLVVLR 194 (339)
T ss_pred ccc-------cCCEEEEeCCCCCCC--CCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc-cc-chhccC-CCCEEEEe
Confidence 111 122578888877666 4557788999999999999999999999977321 11 111111 23333
Q ss_pred eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHHHHhH
Q 013204 270 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGV 348 (447)
Q Consensus 270 ~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l~~~L 348 (447)
+|||.++.+++|+|++++++++++.+... . ..+..+.+++.++.++|+.-. .+...+.+++.++++.+.|
T Consensus 195 SfSK~~gl~GlRiGy~v~~~~li~~l~~~-------~--~~~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L 265 (339)
T PRK06959 195 SVGKFFGLAGVRAGFVLAAPALLAALRDA-------L--GAWTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALL 265 (339)
T ss_pred cChhhcCCcchheEEEecCHHHHHHHHHh-------c--CCCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999984449999999999999988742 1 245557778888888775211 1334566666777777777
Q ss_pred hhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC--CEEEEecCCCCCHHHHHHHH
Q 013204 349 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELI 426 (447)
Q Consensus 349 ~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g--~~iR~~~~~~~t~e~i~~~~ 426 (447)
+++ +.... ..+.++.+.+.+ ...+.+.|+++||.++.++ +.+|++ +..+++++++++
T Consensus 266 ~~~-g~~~~----~~~~f~~~~~~~--------------~~~l~~~l~~~GI~vr~~~~~~~lRis--i~~~~~e~~~l~ 324 (339)
T PRK06959 266 RAH-GFAVH----ATPLFSWTDDPR--------------AAALHAALARRGIWTRYFAPPPSVRFG--LPADEAEWQRLE 324 (339)
T ss_pred HHC-CCCcc----CcceEEEEeCCC--------------HHHHHHHHHhCCeEEEECCCCCeEEEE--CCCCHHHHHHHH
Confidence 775 22221 234554554421 3458889999999998765 579999 446889999999
Q ss_pred HHHHHHHHHHH
Q 013204 427 SKYGKALKATE 437 (447)
Q Consensus 427 ~~l~~~l~~~~ 437 (447)
++|++.++.+.
T Consensus 325 ~al~~~~~~~~ 335 (339)
T PRK06959 325 DALAECVPTLA 335 (339)
T ss_pred HHHHHHHHHHh
Confidence 99988877654
No 181
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.86 E-value=3.4e-19 Score=172.83 Aligned_cols=323 Identities=15% Similarity=0.216 Sum_probs=196.8
Q ss_pred CCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCC-CCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcc
Q 013204 50 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 128 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~ 128 (447)
-+|.+.+++...... .... ..+...++.+.+++.+.-.+ ...+++++||+++++.++..+. .+++
T Consensus 10 ~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~--------~~~~ 75 (355)
T TIGR03301 10 TSATVRDAMLVDWCH---WDSE---FNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV--------PRDG 75 (355)
T ss_pred CCHHHHHHhhhhccC---CCHH---HHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc--------CCCC
Confidence 356666666652211 1111 12566778888888774222 2368889999999999998763 2346
Q ss_pred eEEEEcCCCccchhh-hhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEE
Q 013204 129 KFIARQKSYHGSTLI-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAA 207 (447)
Q Consensus 129 ~vi~~~~~yhg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~ 207 (447)
++++.++.+++.... .....|.+. ..++.++.+. .+.+++++.+... + .+..
T Consensus 76 ~vi~~~~~~~~~~~~~~a~~~g~~~------------~~i~~~~~~~-------------~d~~~l~~~l~~~-~-~~~~ 128 (355)
T TIGR03301 76 KLLVLINGAYGERLAKICEYLGIPH------------TDLNFSEYEP-------------PDLNRIEEALAAD-P-DITH 128 (355)
T ss_pred eEEEECCCchhhHHHHHHHHcCCce------------EEEecCCCCC-------------CCHHHHHHHHHhC-C-CceE
Confidence 778777777775322 111112111 1111111000 0137788877642 2 3445
Q ss_pred EEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee--eecccCCCcccceeEE
Q 013204 208 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAI 285 (447)
Q Consensus 208 vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v--~~sK~l~gg~~~~g~~ 285 (447)
+++..+++.+|.+.+ +++|.++|++||+++|+|++++ +|.. .+....+ ..|++ +++|+++|+ .++|++
T Consensus 129 v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~livD~~~s-~g~~--~~~~~~~--~~d~~~~s~~K~l~~~-~G~g~~ 198 (355)
T TIGR03301 129 VATVHHETTTGILNP----LEAIAKVARSHGAVLIVDAMSS-FGAI--PIDIEEL--DVDALIASANKCLEGV-PGFGFV 198 (355)
T ss_pred EEEEecCCcccchhH----HHHHHHHHHHcCCEEEEEeccc-cCCc--ccchhhc--CccEEEecCCcccccC-CceeEE
Confidence 554445556677766 8999999999999999999887 5432 2222333 35655 567998775 578999
Q ss_pred EeChhHHHHhhhccCCCC-cc---------CcCCCCCCcHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHhHhhc
Q 013204 286 LVSPEVSEVIHSQSNTLG-SF---------SHGFTYSGHPVSCAVAIEALKIYKER----NIVEQVNKIAPKFQDGVKAF 351 (447)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~-~~---------~~~~t~~~~~~~~~aa~a~l~~~~~~----~~~~~~~~~~~~l~~~L~~l 351 (447)
++++++++.+........ .+ .....++.+...+.++.++++.+.++ +..++++++.+++++.|+++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~ 278 (355)
T TIGR03301 199 IARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL 278 (355)
T ss_pred EECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999887752110000 00 01123456777777777788766443 34566777788888888775
Q ss_pred cCCCceee-EeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC----CEEEEecCCCCCHHHHHHHH
Q 013204 352 SDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----DNIMMSPPFIMSPEEVDELI 426 (447)
Q Consensus 352 ~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g----~~iR~~~~~~~t~e~i~~~~ 426 (447)
+..++.. ....+.++.+.++..... ....+.++|.++||++.+++ +.+||+++..++++++++++
T Consensus 279 -g~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~ 348 (355)
T TIGR03301 279 -GFQPLLPERWQSPIIVSFLYPDDPDF---------DFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLL 348 (355)
T ss_pred -CCeeecCCCCCCCcEEEEECCCCCcc---------hHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHH
Confidence 2222211 122334445555431100 13458889999999998764 57999998889999999999
Q ss_pred HHHHHHH
Q 013204 427 SKYGKAL 433 (447)
Q Consensus 427 ~~l~~~l 433 (447)
+.|++++
T Consensus 349 ~~l~~~~ 355 (355)
T TIGR03301 349 EAIKDAL 355 (355)
T ss_pred HHHHhhC
Confidence 9998753
No 182
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.86 E-value=1.4e-18 Score=174.56 Aligned_cols=344 Identities=14% Similarity=0.074 Sum_probs=199.5
Q ss_pred CHHHHHHHHHHHhcCC---cccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCC
Q 013204 51 EPRLVAAATAQLNTLP---FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPN 126 (447)
Q Consensus 51 ~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~ 126 (447)
+..+.+++.+.++... ..|+...+..+....+++.+.+... ...+++|++++|+++|+..+++.+.. ..
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~-------~~ 162 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIG-------DP 162 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcc-------CC
Confidence 4467777776655421 1122222333344444444443321 24678999999999999999987630 13
Q ss_pred cceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhC--CCc
Q 013204 127 KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG--PET 204 (447)
Q Consensus 127 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~ 204 (447)
++.|++.+|.|.++.......+..... +++..... + ..++++|++.+.... ..+
T Consensus 163 gD~Vlv~~P~y~~y~~~~~~~g~~~v~-------------v~~~~~~~----------~-~~d~~~l~~~l~~~~~~~~~ 218 (481)
T PTZ00377 163 SDGVMIPIPQYPLYSAAITLLGGKQVP-------------YYLDEEKG----------W-SLDQEELEEAYEQAVRNGIT 218 (481)
T ss_pred CCEEEECCCCchhHHHHHHHcCCEEEE-------------EEeccccC----------C-CCCHHHHHHHHHHHHhcCCC
Confidence 478999999999886555443332211 11100000 0 001377777775321 113
Q ss_pred E-EEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccc-ccc-cc-cc-CCCCC------Cee---e
Q 013204 205 I-AAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG-TMF-GC-DK-YSIKP------DLV---S 270 (447)
Q Consensus 205 ~-a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g-~~~-~~-~~-~~~~~------d~v---~ 270 (447)
+ +++++.|.|++| .+.+.+.+++|.++|++||+++|.||+|..+...+ ..+ .+ .. .++.+ .++ +
T Consensus 219 ~k~l~l~~P~NPTG--~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S 296 (481)
T PTZ00377 219 PRALVVINPGNPTG--QVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHS 296 (481)
T ss_pred eeEEEEECCCCCCC--cCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEec
Confidence 4 466777766665 56688999999999999999999999998764422 122 11 00 11211 233 4
Q ss_pred ecccC-CCcccceeEEEe---ChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHH----------H-h-hhcHH
Q 013204 271 FAKAL-SSAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI----------Y-K-ERNIV 334 (447)
Q Consensus 271 ~sK~l-~gg~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~----------~-~-~~~~~ 334 (447)
|||.+ +-.++|+|++++ ++++++.+... . ...++.+.+++.++.++++. . . .....
T Consensus 297 ~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~-------~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 368 (481)
T PTZ00377 297 TSKGIIGECGRRGGYFELTNIPPEVREQIYKL-------A-SINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIF 368 (481)
T ss_pred CCcccccCCcCceEEEEEeCCCHHHHHHHHHH-------h-heecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHH
Confidence 79985 423399999986 88888888632 1 12345677788887777741 0 0 01122
Q ss_pred HHHHHHHHHHHHhHhhccCCCceeeEeeeee-EEEEEeecCCCCCCCCCC-CcchHHH-HHHHHHHcCceEEeeC-----
Q 013204 335 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPP-EWGIGAY-FGAQCEKHGMLVRVSG----- 406 (447)
Q Consensus 335 ~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~Gi~~~~~g----- 406 (447)
..++++.+.+.+.|+++ +.+......|. ++.+++..+......... ....... +...+.++||.+.++.
T Consensus 369 ~~~~~rr~~l~~~L~~~---~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~ 445 (481)
T PTZ00377 369 TSLKRRAELLTDELNKI---EGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQK 445 (481)
T ss_pred HHHHHHHHHHHHHHhcC---CCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCC
Confidence 23455555566666554 33444455554 444444311100000000 0000122 3455667899998752
Q ss_pred ---CEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 013204 407 ---DNIMMSPPFIMSPEEVDELISKYGKALKATEERV 440 (447)
Q Consensus 407 ---~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~ 440 (447)
+.+|++ +..+++++++++++|.+++++..+++
T Consensus 446 ~~~~~~Rls--~~~~~e~l~~~l~rl~~~~~~~~~~~ 480 (481)
T PTZ00377 446 PGTYHFRIT--ILPPEEQIEEMVKKIKEFHESFMKKY 480 (481)
T ss_pred CCCCEEEEE--ECCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 369999 56788999999999999998877664
No 183
>PRK05839 hypothetical protein; Provisional
Probab=99.86 E-value=7e-19 Score=171.40 Aligned_cols=328 Identities=11% Similarity=-0.007 Sum_probs=194.0
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhhHHH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEAND 109 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGseA~~ 109 (447)
.|+.++||..|. ..++ .++.+.+++.+....... ++...+..+....+++.+.+.+. ...+++|++++|+++|+.
T Consensus 22 ~~~~~i~l~~~~--p~~~-~~~~~~~a~~~~~~~~~~-Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~ 97 (374)
T PRK05839 22 KEYKGLDLTIGE--PQFE-TPKFIQDALKNNAHLLNK-YPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLF 97 (374)
T ss_pred CCCCeEEcCCCC--CCCC-CCHHHHHHHHHHhhccCC-CCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 488999998775 3455 467888888776543222 22222333445556666655542 246789999999999998
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 189 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (447)
.++++.. ..++.+.|++.+|+|..+.......+.. . ..++......+.. +
T Consensus 98 ~~~~~~~------~~~~gd~vlv~~P~y~~~~~~~~~~g~~-v------------~~v~~~~~~~~~~-----d------ 147 (374)
T PRK05839 98 NFPQFVL------FDKQNPTIAYPNPFYQIYEGAAIASRAK-V------------LLMPLTKENDFTP-----S------ 147 (374)
T ss_pred HHHHHHh------cCCCCCEEEECCCCchhhHHHHHhcCCE-E------------EEeecccccCCcC-----C------
Confidence 8877542 1123578889999998876555432221 1 1111110000000 0
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccccc-ccC---C--
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKY---S-- 263 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~-~~~---~-- 263 (447)
+.+ ..+ .+...+++++|.|++| ...+.+.+++|.++|++||+++|.||+|..+...+..... ... +
T Consensus 148 ~~~--~~~----~~~k~v~i~nP~NPTG--~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~ 219 (374)
T PRK05839 148 LNE--KEL----QEVDLVILNSPNNPTG--RTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNE 219 (374)
T ss_pred cch--hhh----ccccEEEEeCCCCCcC--cccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCcc
Confidence 011 111 1233455666666665 4557899999999999999999999999877322221111 110 0
Q ss_pred CCCCee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcH----HHH
Q 013204 264 IKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI----VEQ 336 (447)
Q Consensus 264 ~~~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~----~~~ 336 (447)
..+.++ +|||.++.+++|+|++++++++++.+... ....+++.+.+++.++.+++. .++. .+.
T Consensus 220 ~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~ 289 (374)
T PRK05839 220 SFKNVLVINSISKRSSAPGLRSGFIAGDASILKKYKAY-------RTYLGCASPLPLQKAAAVAWL---DDEHAEFFRNI 289 (374)
T ss_pred ccCcEEEEeccccccCCccceeEEEecCHHHHHHHHHH-------HhhcCCCCChHHHHHHHHHhc---cchHHHHHHHH
Confidence 112333 58998766559999999999998887532 111233445556665555553 2222 233
Q ss_pred HHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHH-cCceEEee---------C
Q 013204 337 VNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS---------G 406 (447)
Q Consensus 337 ~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~---------g 406 (447)
++++.+.+.+.| +.. ....|.++.+.+.+ ...+.++|++ +||.+.++ .
T Consensus 290 ~~~~~~~~~~~l----~~~----~p~gg~fi~~~~~~--------------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~ 347 (374)
T PRK05839 290 YAKNLKLAREIL----GIT----IPPATFYVWLPVDN--------------DEEFTKKLYQNEGIKVLPGSFLGRNGIGK 347 (374)
T ss_pred HHHHHHHHHHhc----CCC----CCCeeEEEEEeCCC--------------hHHHHHHHHHHCCEEEeCchhhCCCCCCC
Confidence 333333333222 111 23345666666542 2347777764 99999874 1
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 407 DNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 407 ~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
+.+|++ +..+++++.+++++|.+.++
T Consensus 348 ~~iRis--~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 348 GYVRIA--LVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred CeEEEE--ecCCHHHHHHHHHHHHHHhh
Confidence 569999 45689999999999988764
No 184
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=2.8e-19 Score=171.31 Aligned_cols=321 Identities=15% Similarity=0.160 Sum_probs=202.2
Q ss_pred EecCcEEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc--CCCCeE
Q 013204 21 KSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA--SKMAKV 98 (447)
Q Consensus 21 ~~~g~~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~v 98 (447)
++.|.+-+..+|+..+|+..|- ++++ .+|.+++++.+.+...... ..+.....+|.+.+++++.. .+.++|
T Consensus 7 ~~~~~~~~~~~~~~~i~l~~~~--~~~~-~p~~~~~~~~~~~~~~~~~----~Y~~~~~~~Lr~aia~~~~~~~~~~~~i 79 (335)
T PRK14808 7 IAKRAYPYETEKRDRTYLALNE--NPFP-FPEDLVDEVFRRLNSDTLR----IYYDSPDEELIEKILSYLDTDFLSKNNV 79 (335)
T ss_pred hhccCcCCCCCCCceeEecCCC--CCCC-CCHHHHHHHHHHhhhhhhh----cCCCCChHHHHHHHHHHhCCCCCCcceE
Confidence 3455555656888999997764 5676 6889999998877532111 01222456777777777631 457899
Q ss_pred EEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCC
Q 013204 99 FFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP 178 (447)
Q Consensus 99 ~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (447)
++++|+++++..+++.. +.|++.+|+|.+....+...+.... .++....+. .
T Consensus 80 ~it~Ga~~~i~~~~~~~------------d~v~v~~P~y~~~~~~~~~~g~~~~-------------~v~~~~~~~--~- 131 (335)
T PRK14808 80 SVGNGADEIIYVMMLMF------------DRSVFFPPTYSCYRIFAKAVGAKFL-------------EVPLTKDLR--I- 131 (335)
T ss_pred EEcCCHHHHHHHHHHHh------------CcEEECCCCHHHHHHHHHHcCCeEE-------------EecCCCcCC--C-
Confidence 99999999999988754 3589999999888665555433211 111111000 0
Q ss_pred CCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccc
Q 013204 179 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG 258 (447)
Q Consensus 179 ~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~ 258 (447)
++. . + . .+...++.+|.|++|. ..+.+.+++| + ++++++|.||+|..|. +....
T Consensus 132 ------------~~~-~-~---~-~~~~i~i~nP~NPTG~--~~s~~~l~~l---~-~~~~~ii~DE~Y~~f~--~~~~~ 185 (335)
T PRK14808 132 ------------PEV-N-V---G-EGDVVFIPNPNNPTGH--VFEREEIERI---L-KTGAFVALDEAYYEFH--GESYV 185 (335)
T ss_pred ------------Chh-H-c---c-CCCEEEEeCCCCCCCC--CcCHHHHHHH---H-hcCCEEEEECchhhhc--CCchH
Confidence 101 0 1 1 2334566666676663 3455555554 4 4799999999999873 21111
Q ss_pred cccCCCCCCee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh-hcHH
Q 013204 259 CDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIV 334 (447)
Q Consensus 259 ~~~~~~~~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~~~ 334 (447)
....-.+.++ +|||.++..++|+|++++++++++.+... . .+++.+.+++.++.++++..+. .+..
T Consensus 186 -~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~-------~--~~~~~~~~~q~a~~~~l~~~~~~~~~~ 255 (335)
T PRK14808 186 -DLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRV-------R--LPFNVSYVSQMFAKVALDHREIFEERT 255 (335)
T ss_pred -HHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHh-------c--CCCCCCHHHHHHHHHHHhCHHHHHHHH
Confidence 1011112333 68999984339999999999999988632 1 2345566777777777753211 2223
Q ss_pred HHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeCCEEEEecC
Q 013204 335 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPP 414 (447)
Q Consensus 335 ~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g~~iR~~~~ 414 (447)
+.+.+..+.+.+.|+++ + .....+.|.++.+.+.... ...+.++|+++||.+....+.+|++
T Consensus 256 ~~~~~~r~~l~~~L~~~---g-~~~~~~~g~f~~~~l~~~~------------~~~~~~~l~~~Gi~V~~~~~~~Ris-- 317 (335)
T PRK14808 256 KFIVEERERMKSALREM---G-YRITDSRGNFVFIFMEKEE------------KERLLEHLRAKNIAVRSFREGVRIT-- 317 (335)
T ss_pred HHHHHHHHHHHHHHHHC---C-CEECCCCCeEEEEeCCCcc------------HHHHHHHHHHCCeEEEECCCCeEEe--
Confidence 44445555666666654 2 2233457888777765321 3457889999999999887789999
Q ss_pred CCCCHHHHHHHHHHHHH
Q 013204 415 FIMSPEEVDELISKYGK 431 (447)
Q Consensus 415 ~~~t~e~i~~~~~~l~~ 431 (447)
..+.++.+++++.|++
T Consensus 318 -i~~~~~~~~~~~~l~~ 333 (335)
T PRK14808 318 -IGKREENDMILKELEV 333 (335)
T ss_pred -cCCHHHHHHHHHHHHh
Confidence 5678999999998875
No 185
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.86 E-value=2.9e-19 Score=173.75 Aligned_cols=321 Identities=13% Similarity=0.017 Sum_probs=193.2
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC--cCCCCeEEEeCChhhHH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT--ASKMAKVFFTNSGSEAN 108 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~v~~~~sGseA~ 108 (447)
++..++||..+. +....+|.+.+++.+..... .++...+.......+++.+.+.+. +..++++++++|+++++
T Consensus 25 ~~~~~i~l~~~~---p~~~~~~~~~~~~~~~~~~~--~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i 99 (364)
T PRK07865 25 HPDGIVDLSVGT---PVDPVPPVIQEALAAAADAP--GYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELV 99 (364)
T ss_pred cCCCEEEcCCCC---CCCCCCHHHHHHHHHHHhhC--CCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHH
Confidence 455688998773 33434688888887665432 222222334455566666655433 14578999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHH
Q 013204 109 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 188 (447)
Q Consensus 109 ~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (447)
..++.++. . ..++.|++.+++|.+........+... +.++.
T Consensus 100 ~~~~~~l~------~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~---------------~~~~~----------------- 140 (364)
T PRK07865 100 AWLPTLLG------L-GPGDVVVIPELAYPTYEVGARLAGATV---------------VRADS----------------- 140 (364)
T ss_pred HHHHHHHc------C-CCCCEEEECCCCcccHHHHHHhcCCEE---------------EecCC-----------------
Confidence 88766541 1 234789999999987754433222111 00100
Q ss_pred HHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccc-ccc--CCCC
Q 013204 189 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDK--YSIK 265 (447)
Q Consensus 189 ~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~-~~~--~~~~ 265 (447)
+++++. ..+.+|++++.++.+| ...+.+.+++|.++|++||+++|.||+|..+...+.... ... .+..
T Consensus 141 -~~~l~~-------~~~~~v~~~~p~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 211 (364)
T PRK07865 141 -LTELGP-------QRPALIWLNSPSNPTG-RVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGD 211 (364)
T ss_pred -hhhCCc-------ccceEEEEcCCCCCCC-ccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCc
Confidence 122221 2344555554445555 445778999999999999999999999997754442211 111 0111
Q ss_pred -CCee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHH
Q 013204 266 -PDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKI 340 (447)
Q Consensus 266 -~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~ 340 (447)
..++ +|||.++..++++|++++++++++.+... .....++.+.+.+.++.++++..+ .++..+.++++
T Consensus 212 ~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 284 (364)
T PRK07865 212 HTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELLEV-------RKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARR 284 (364)
T ss_pred cceEEEEeechhccCCCceeeEEEecCHHHHHHHHHH-------HHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 2222 58999865448999999999998887632 111234556677776666664211 12234455555
Q ss_pred HHHHHHhHhhccCCCceeeEeeeee-EEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-------CCEEEEe
Q 013204 341 APKFQDGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMS 412 (447)
Q Consensus 341 ~~~l~~~L~~l~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------g~~iR~~ 412 (447)
.+.+.+.|++. ++ ....+.|. ++.+.+.. . ...+.+.|.++||.+.++ .+.+|++
T Consensus 285 ~~~l~~~L~~~---g~-~~~~~~~~~~~~~~~~~-~------------~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~ 347 (364)
T PRK07865 285 RAVLRPALEAA---GF-RVDHSEAGLYLWATRGE-D------------CWDTVAWLAERGILVAPGDFYGPAGAQHVRVA 347 (364)
T ss_pred HHHHHHHHHHc---CC-cccCCCccEEEEEeCCC-C------------HHHHHHHHHHCCEEEeCccccCcCCCCEEEEE
Confidence 66666666553 21 12233443 44454421 1 234678889999999864 2469999
Q ss_pred cCCCCCHHHHHHHHHHHH
Q 013204 413 PPFIMSPEEVDELISKYG 430 (447)
Q Consensus 413 ~~~~~t~e~i~~~~~~l~ 430 (447)
+..+++++++++++|+
T Consensus 348 --~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 348 --LTATDERIAAAVERLA 363 (364)
T ss_pred --ecCCHHHHHHHHHHhh
Confidence 5458999999999885
No 186
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.86 E-value=3.5e-19 Score=173.95 Aligned_cols=326 Identities=13% Similarity=0.127 Sum_probs=198.0
Q ss_pred CCCCCHHHHHHHHHHHhcCCcc-cc-cC---cCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHh
Q 013204 47 LGGSEPRLVAAATAQLNTLPFY-HS-FW---NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA 121 (447)
Q Consensus 47 lG~~~p~v~~a~~~~~~~~~~~-~~-~~---~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~ 121 (447)
.|..+|.+.+++.+..+..... ++ .+ ....+...++.+.+++.+.....+++++++|+++|+..+++.+...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~--- 84 (373)
T cd06453 8 TSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRA--- 84 (373)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhc---
Confidence 4567899999998887553221 11 10 0112334567778888874322568999999999999999876410
Q ss_pred cCCCCcceEEEEcCCCccchhh---hhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHH
Q 013204 122 LGRPNKKKFIARQKSYHGSTLI---AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLIL 198 (447)
Q Consensus 122 ~~~~~~~~vi~~~~~yhg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~ 198 (447)
..++++|++.++.|.+.... .....|.. +..++....+ ..+++++++.+.
T Consensus 85 --~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~-------------~~d~~~l~~~l~ 137 (373)
T cd06453 85 --NKPGDEIVTSVMEHHSNIVPWQQLAERTGAK------------LKVVPVDDDG-------------QLDLEALEKLLT 137 (373)
T ss_pred --CCCCCEEEECcchhHHHHHHHHHHHhhcCcE------------EEEeecCCCC-------------CcCHHHHHHHhc
Confidence 01346788777666553211 11111111 1112211100 011377777764
Q ss_pred hhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCC
Q 013204 199 KEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALS 276 (447)
Q Consensus 199 ~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~ 276 (447)
+++++|++..+++..|.+.+ +++|.++|++||+++++|++++ +|... .......+|++++| |.++
T Consensus 138 ----~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~li~D~a~~-~~~~~----~~~~~~~~d~~~~s~~K~~~ 204 (373)
T cd06453 138 ----ERTKLVAVTHVSNVLGTINP----VKEIGEIAHEAGVPVLVDGAQS-AGHMP----VDVQDLGCDFLAFSGHKMLG 204 (373)
T ss_pred ----CCceEEEEeCcccccCCcCC----HHHHHHHHHHcCCEEEEEhhhh-cCcee----eeccccCCCEEEeccccccC
Confidence 25667777777777787766 8999999999999999999987 43321 12223457999888 9887
Q ss_pred CcccceeEEEeChhHHHHhhhccCCC---Cc-------c----CcCCCCCCcHHHHHHHHHHHHHHhhhc---HHHHHHH
Q 013204 277 SAYMPIGAILVSPEVSEVIHSQSNTL---GS-------F----SHGFTYSGHPVSCAVAIEALKIYKERN---IVEQVNK 339 (447)
Q Consensus 277 gg~~~~g~~~~~~~~~~~~~~~~~~~---~~-------~----~~~~t~~~~~~~~~aa~a~l~~~~~~~---~~~~~~~ 339 (447)
+ .++|++++++++++.+....... .. + ......+.+..++.+..++++.+.+.+ ..++.++
T Consensus 205 ~--~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~ 282 (373)
T cd06453 205 P--TGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHE 282 (373)
T ss_pred C--CCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 6 57899999999887765311000 00 0 000011334445555566677666543 4556666
Q ss_pred HHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-------------C
Q 013204 340 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------------G 406 (447)
Q Consensus 340 ~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------------g 406 (447)
+.+++++.|+++....++......+.++.+.+... ....+.++|.++||.+.++ .
T Consensus 283 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~ 350 (373)
T cd06453 283 LTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGI------------HPHDVATILDQYGIAVRAGHHCAQPLMRRLGVP 350 (373)
T ss_pred HHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCc------------CHHHHHHHHHHCCEEeccCccchhHHHHHhCCC
Confidence 66777777766532222222222355556655321 1446888999999988642 2
Q ss_pred CEEEEecCCCCCHHHHHHHHHHH
Q 013204 407 DNIMMSPPFIMSPEEVDELISKY 429 (447)
Q Consensus 407 ~~iR~~~~~~~t~e~i~~~~~~l 429 (447)
+.+|++++..+|++|+|+++++|
T Consensus 351 ~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 351 GTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CeEEEEecCCCCHHHHHHHHhhC
Confidence 56999999999999999999864
No 187
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=1e-18 Score=168.90 Aligned_cols=319 Identities=14% Similarity=0.125 Sum_probs=195.4
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHH
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVK 113 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~ 113 (447)
..+|+..|. +.++ .+|.+.+++.+.+...... ..+.....++.+.+++++ ...++++++++|+++++..+++
T Consensus 23 ~~~~l~~~~--~~~~-~p~~~~~a~~~~~~~~~~~----~y~~~~~~~lr~~ia~~~-~~~~~~i~it~G~~~~l~~~~~ 94 (351)
T PRK14807 23 YKYKMDANE--TPFE-LPEEVIKNIQEIVKSSQVN----IYPDPTAEKLREELARYC-SVVPTNIFVGNGSDEIIHLIML 94 (351)
T ss_pred ceeEccCCC--CCCC-CCHHHHHHHHHHhhcCccc----CCCCccHHHHHHHHHHHh-CCCcccEEEecCHHHHHHHHHH
Confidence 347776654 3555 6789999998877532111 112233567888888886 3466799999999999988888
Q ss_pred HHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHH
Q 013204 114 LVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 193 (447)
Q Consensus 114 ~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 193 (447)
... ..+++|++.+|+|..+....... |... ..++..+.+. .+++++
T Consensus 95 ~l~--------~~gd~Vlv~~p~y~~~~~~~~~~-g~~~------------~~v~~~~~~~-------------~d~~~l 140 (351)
T PRK14807 95 AFI--------NKGDVVIYPHPSFAMYSVYSKIA-GAVE------------IPVKLKEDYT-------------YDVGSF 140 (351)
T ss_pred Hhc--------CCCCEEEEeCCChHHHHHHHHHc-CCeE------------EEeecCCCCC-------------CCHHHH
Confidence 653 33578999999998654433322 2111 1111111000 013667
Q ss_pred HHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee---e
Q 013204 194 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV---S 270 (447)
Q Consensus 194 e~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v---~ 270 (447)
++.+.. .++++|++...++.+|...+ .+++.++|++++.++|+||+|.++. +.... ......+.++ +
T Consensus 141 ~~~~~~---~~~k~v~l~~p~NPtG~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~--~~~~~-~~~~~~~~vi~~~S 210 (351)
T PRK14807 141 IKVIEK---YQPKLVFLCNPNNPTGSVIE----REDIIKIIEKSRGIVVVDEAYFEFY--GNTIV-DVINEFENLIVLRT 210 (351)
T ss_pred HHHhhc---cCCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCCEEEEeCcchhhc--ccchH-HHhhhCCCEEEEec
Confidence 666642 23444444444555565555 6777888888888999999998762 32111 1111113333 5
Q ss_pred ecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhh
Q 013204 271 FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 350 (447)
Q Consensus 271 ~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~ 350 (447)
|||.++-+++|+|++++++++++.+... . ..+..+.+++.++.+.++.-.-++..+.++++.+.+.+.|++
T Consensus 211 ~SK~~~~~GlRiG~~v~~~~~~~~~~~~-------~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~ 281 (351)
T PRK14807 211 LSKAFGLAGLRVGYAVANENILKYLNLV-------K--SPYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSK 281 (351)
T ss_pred chHhcccchhceeeeecCHHHHHHHHHc-------c--CCCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999874339999999999999888632 1 124456777777777665311122334455555566666654
Q ss_pred ccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC------CEEEEecCCCCCHHHHHH
Q 013204 351 FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------DNIMMSPPFIMSPEEVDE 424 (447)
Q Consensus 351 l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g------~~iR~~~~~~~t~e~i~~ 424 (447)
+.+ +....+.|.++.+.+.+ ...+.+.|+++||.+.+++ +.+|++ ..+.++.++
T Consensus 282 ~~g---~~~~~~~~~~~~i~~~~--------------~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis---~~~~~~~~~ 341 (351)
T PRK14807 282 IPG---IKVYPSKTNFILVKFKD--------------ADYVYQGLLERGILVRDFSKVEGLEGALRIT---VSSCEANDY 341 (351)
T ss_pred CCC---cEECcCCccEEEEEcCC--------------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEE---cCCHHHHHH
Confidence 422 22234456666666642 3457888999999997642 469999 346788899
Q ss_pred HHHHHHHHH
Q 013204 425 LISKYGKAL 433 (447)
Q Consensus 425 ~~~~l~~~l 433 (447)
+++.|++.+
T Consensus 342 l~~~l~~~~ 350 (351)
T PRK14807 342 LINGLKELL 350 (351)
T ss_pred HHHHHHHhh
Confidence 998887653
No 188
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=3.7e-19 Score=173.55 Aligned_cols=319 Identities=15% Similarity=0.128 Sum_probs=195.6
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 111 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~A 111 (447)
+...+|+..|. +++| .+|.+.+++.+. .....+ +.....++.+.+++.+. .++++|++++|+++++..+
T Consensus 51 ~~~~i~l~~n~--~p~~-~~~~v~~a~~~~-~~~~~Y------p~~~~~~lr~~ia~~~~-~~~~~I~~t~Ga~~~i~~~ 119 (380)
T PLN03026 51 PEDIVKLDANE--NPYG-PPPEVLEALGNM-KFPYVY------PDPESRRLRAALAEDSG-LESENILVGCGADELIDLL 119 (380)
T ss_pred ccceEEccCCC--CCCC-CCHHHHHHHHhh-HhhccC------CCCCHHHHHHHHHHHhC-cChhhEEEcCCHHHHHHHH
Confidence 56889987764 5666 578888887642 111111 22335678888888873 5677899999999999998
Q ss_pred HHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHH
Q 013204 112 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191 (447)
Q Consensus 112 l~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (447)
++... ..+++|++.+|.|..+....... |... ..++....+. .+++
T Consensus 120 ~~~~~--------~~gd~Vlv~~P~y~~y~~~~~~~-g~~~------------~~v~~~~~~~-------------~d~~ 165 (380)
T PLN03026 120 MRCVL--------DPGDKIIDCPPTFGMYVFDAAVN-GAEV------------IKVPRTPDFS-------------LDVP 165 (380)
T ss_pred HHHhc--------CCCCEEEEcCCChHHHHHHHHHc-CCEE------------EEeecCCCCC-------------cCHH
Confidence 87653 23478999999997554333222 2111 0111110000 0136
Q ss_pred HHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee--
Q 013204 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV-- 269 (447)
Q Consensus 192 ~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v-- 269 (447)
++++.+.. .++++|++++.++.+|.+.+ .+++.++++.. +++|+||+|..|...+.. .....-.+.++
T Consensus 166 ~l~~~~~~---~~~~~v~l~~P~NPTG~~~~----~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~--~~~~~~~~~viv~ 235 (380)
T PLN03026 166 RIVEAVET---HKPKLLFLTSPNNPDGSIIS----DDDLLKILELP-ILVVLDEAYIEFSTQESR--MKWVKKYDNLIVL 235 (380)
T ss_pred HHHHHHhc---cCCcEEEEeCCCCCCCCCCC----HHHHHHHHhcC-CEEEEECcchhhcCCcch--HHHHHhCCCEEEE
Confidence 66666532 23445554455555565554 45555666543 899999999877432211 11111123333
Q ss_pred -eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHHHHh
Q 013204 270 -SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDG 347 (447)
Q Consensus 270 -~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l~~~ 347 (447)
+|||.++-.++|+|++++++++++.+... . ..+..+.+++.++.++|+..+ -++..+.++++++++.+.
T Consensus 236 ~SfSK~~glaGlRiGy~~~~~~~i~~l~~~-------~--~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~ 306 (380)
T PLN03026 236 RTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-------K--QPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGL 306 (380)
T ss_pred ecchHhhcCccccceeeecCHHHHHHHHHh-------c--CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH
Confidence 68998874449999999999998888632 1 134566777777777775211 123445566666677777
Q ss_pred HhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-----CEEEEecCCCCCHHHH
Q 013204 348 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSPEEV 422 (447)
Q Consensus 348 L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-----~~iR~~~~~~~t~e~i 422 (447)
|+++ +.....+..|.++.+.+.... ....+.+.|+++||.+.++. +.+||+ ..+++++
T Consensus 307 L~~~---~~~~~~p~~~~f~~~~~~~~~-----------~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis---~~~~~~~ 369 (380)
T PLN03026 307 LKEV---PFLEPYPSDANFILCRVTSGR-----------DAKKLKEDLAKMGVMVRHYNSKELKGYIRVS---VGKPEHT 369 (380)
T ss_pred HHHC---CCCeECCCCCeEEEEECCCCC-----------CHHHHHHHHHHCCeEEEECCCCCCCCEEEEe---cCCHHHH
Confidence 7665 222223445666666654211 13458888999999998752 569999 3478889
Q ss_pred HHHHHHHHH
Q 013204 423 DELISKYGK 431 (447)
Q Consensus 423 ~~~~~~l~~ 431 (447)
+++++.|++
T Consensus 370 ~~l~~al~~ 378 (380)
T PLN03026 370 DALMEALKQ 378 (380)
T ss_pred HHHHHHHHH
Confidence 999998875
No 189
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.86 E-value=3.6e-19 Score=173.12 Aligned_cols=308 Identities=14% Similarity=0.126 Sum_probs=178.8
Q ss_pred hHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCC
Q 013204 77 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK 156 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 156 (447)
+...++.+.+++++ +.+.+.+++||++++..++.... .+++.|++..+.++... ......|....
T Consensus 51 ~~~~~~~e~lA~~~---g~~~~~i~~g~~~a~~~~~~~l~--------~~gd~Vl~~~~~h~s~~-~~~~~~g~~~~--- 115 (370)
T TIGR02539 51 PPIHDFLEDLAEFL---GMDEARVTHGAREGKFAVMHALC--------KEGDWVVLDGLAHYTSY-VAAERAGLNVK--- 115 (370)
T ss_pred hHHHHHHHHHHHHh---CCCceEEECChHHHHHHHHHHhh--------CCCCEEEECCcccHHHH-HHHHHcCCEEE---
Confidence 45677888888886 44568889999999999988664 23466666545544333 33332332211
Q ss_pred CCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhC---CCcEEEEEEccccCCCCCccCChhHHHHHHHH
Q 013204 157 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG---PETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 233 (447)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~---~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l 233 (447)
.++.... .....+++++++.+.... .+.+.+|+++.+++..|.+.+ +++|.++
T Consensus 116 ---------~~~~~~~-----------~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~----l~~i~~l 171 (370)
T TIGR02539 116 ---------EVPHTGH-----------PEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD----AGKVAKV 171 (370)
T ss_pred ---------EEecCCc-----------ccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC----HHHHHHH
Confidence 1111000 000012477777775311 124567777777777787776 9999999
Q ss_pred HHhcCCEEEEehhhcCCCccccccccccCCCCCCee--eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCC-
Q 013204 234 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT- 310 (447)
Q Consensus 234 ~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v--~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t- 310 (447)
|++||+++|+||+|+ +|..+... ....+|++ +++|+++++ .|+|++++++++++.+....... .+.....
T Consensus 172 a~~~~~~livDea~~-~g~~~~~~----~~~~~di~v~s~sK~~~~~-g~~G~l~~~~~~i~~l~~~~~~~-~~~~~~~~ 244 (370)
T TIGR02539 172 CREKGVPLLLNCAYT-VGRMPVSA----KEIGADFIVGSGHKSMAAS-GPCGVLGMSEEWEDIVLRKSRYS-PVKEVELL 244 (370)
T ss_pred HHHcCCeEEEECccc-cCCcCCCH----HHcCCCEEEeeCcccccCC-CCEEEEEECHHHHhhhcccccCC-ccceeeee
Confidence 999999999999998 44322111 11235765 578999876 58999999999998886432111 0000000
Q ss_pred -CCCcHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchH
Q 013204 311 -YSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIG 388 (447)
Q Consensus 311 -~~~~~~~~~aa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~ 388 (447)
......++.++.++++...+ -+...+..++.+++++.|+++ +..++........++.+.++..... ...+....
T Consensus 245 ~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~~---~~~~~~~~ 320 (370)
T TIGR02539 245 GCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHEI---AQKHKRRG 320 (370)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhHH---hhhhcccc
Confidence 01111244455556653211 111222333456788888876 2222111233445555544311000 00000013
Q ss_pred HHHHHHHHHcCce-EEeeC-CEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 389 AYFGAQCEKHGML-VRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 389 ~~~~~~l~~~Gi~-~~~~g-~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
..+.++|+++||+ +++.. +.+|++.. .++++++++++++|++.+++
T Consensus 321 ~~~~~~L~e~GI~~ir~~~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 321 YFLYEELKKRGIHGIRSGQTKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred HHHHHHHHhCCCccccCCcceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 4588999999997 65543 47999973 68999999999999988765
No 190
>PRK07550 hypothetical protein; Provisional
Probab=99.86 E-value=1.4e-18 Score=170.24 Aligned_cols=340 Identities=12% Similarity=0.076 Sum_probs=201.5
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCC-cccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhhHHH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEAND 109 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGseA~~ 109 (447)
|..++||.++... +. .++.+.+++.+.+.... ..+....+..+....+++.+.+... ...++++++++|+++|+.
T Consensus 28 ~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~ 104 (386)
T PRK07550 28 DGPLIDLSQAVPG--YP-PPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFW 104 (386)
T ss_pred CCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 5678999877532 22 36778888877664311 1122222334444555555554432 235679999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 189 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (447)
.++++.. ..++.|++.+|+|.+....... .|... ..++......+ . .+
T Consensus 105 ~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~-~g~~~------------~~v~~~~~~~~-----~------~~ 152 (386)
T PRK07550 105 AAMVTLA--------GAGDEVILPLPWYFNHKMWLDM-LGIRP------------VYLPCDEGPGL-----L------PD 152 (386)
T ss_pred HHHHHhc--------CCCCEEEEcCCCCcchHHHHHh-cCCEE------------EEEecCCCcCC-----C------CC
Confidence 8888763 2357799999999776433322 12111 11111000000 0 01
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc-cc-ccccCCCCCC
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MF-GCDKYSIKPD 267 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~-~~-~~~~~~~~~d 267 (447)
.+++++.+.. +..+++++.|.|++| ...+.+.+++|.++|++||+++|.||+|.+|...+. .. .....+...+
T Consensus 153 ~~~l~~~~~~---~~~~v~~~~P~NPtG--~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~ 227 (386)
T PRK07550 153 PAAAEALITP---RTRAIALVTPNNPTG--VVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDT 227 (386)
T ss_pred HHHHHHHhcc---cCcEEEEeCCCCCCC--cccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCcccc
Confidence 3667776652 334556677766554 345788999999999999999999999987732211 11 1111111222
Q ss_pred e---eeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh--hcHHHHHHHHHH
Q 013204 268 L---VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAP 342 (447)
Q Consensus 268 ~---v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~--~~~~~~~~~~~~ 342 (447)
+ .+|||.++.+++++|++++++++++.+... ....+.+.+.+++.++..+++.+.+ ++..+.++++.+
T Consensus 228 ~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 300 (386)
T PRK07550 228 LVHLYSFSKSYALTGHRVGAVVASPARIAEIEKF-------MDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRD 300 (386)
T ss_pred EEEEecchhhccCcccceEeeecCHHHHHHHHHH-------HhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 3 368999973338999999999988877631 2223445566676666666653221 233455566666
Q ss_pred HHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEee-------CCEEEEecC
Q 013204 343 KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMMSPP 414 (447)
Q Consensus 343 ~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------g~~iR~~~~ 414 (447)
.+.+.|+.... +......|.+..+.+..... ....+..+|+ ++||.+.++ .+.+|++..
T Consensus 301 ~l~~~L~~~~~---~~~~~~g~~~~~~~~~~~~~----------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~ 367 (386)
T PRK07550 301 AFRAVFARLPG---WELLASGAYFAYVRHPFPDR----------PSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFA 367 (386)
T ss_pred HHHHHHHhCCC---ceeCCCceEEEEecCCCCCC----------CHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEee
Confidence 66666665411 11112234455555543111 1445777765 679999875 246999964
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 013204 415 FIMSPEEVDELISKYGKA 432 (447)
Q Consensus 415 ~~~t~e~i~~~~~~l~~~ 432 (447)
..+++++++++++|.+.
T Consensus 368 -~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 368 -NADVAGIGELVERLRAF 384 (386)
T ss_pred -cCCHHHHHHHHHHHHhh
Confidence 25799999999998764
No 191
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=1.7e-19 Score=174.71 Aligned_cols=321 Identities=16% Similarity=0.173 Sum_probs=195.3
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 111 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~A 111 (447)
++.++||..+. ++++ .+|.+.+++.+.+......+ +.....++.+.+++.+. .+++++++++|+++++..+
T Consensus 23 ~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~~y-----~~~~~~~lr~aia~~~~-~~~~~I~it~G~~~al~~~ 93 (353)
T PRK05387 23 LAKLIKLNTNE--NPYP-PSPKVLEAIRAALGDDLRLY-----PDPNADALRQAIAAYYG-LDPEQVFVGNGSDEVLAHA 93 (353)
T ss_pred ccceeeccCCC--CCCC-CCHHHHHHHHHHhhhhhhcC-----CCCcHHHHHHHHHHHhC-CCHHHEEEcCCHHHHHHHH
Confidence 45789998775 4455 47899999988775421111 22234678888888873 5678999999999999999
Q ss_pred HHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHH
Q 013204 112 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191 (447)
Q Consensus 112 l~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (447)
++.+. ..++.|++.+|.|..+....... |... ..++..+.+. . +++
T Consensus 94 ~~~l~--------~~gd~vlv~~P~y~~~~~~~~~~-g~~~------------~~v~~~~~~~-----~--------d~~ 139 (353)
T PRK05387 94 FLAFF--------NHDRPLLFPDITYSFYPVYAGLY-GIPY------------EEIPLDDDFS-----I--------DVE 139 (353)
T ss_pred HHHhc--------CCCCEEEEeCCCHHHHHHHHHHc-CCEE------------EEeecCCCCC-----C--------CHH
Confidence 98764 33578999999996554332221 2111 1111111110 0 023
Q ss_pred HHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCC-ee-
Q 013204 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD-LV- 269 (447)
Q Consensus 192 ~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d-~v- 269 (447)
++++ ....++++.|.|++| .+ .+.+.+.+|.+.++ ++++|+||+|..|+.. .. .......+. ++
T Consensus 140 ~l~~-------~~~~v~~~~P~NPtG-~~-~~~~~~~~l~~~~~--~~~livDe~y~~~~~~--~~-~~~~~~~~~~i~~ 205 (353)
T PRK05387 140 DYLR-------PNGGIIFPNPNAPTG-IA-LPLAEIERILAANP--DSVVVIDEAYVDFGGE--SA-IPLIDRYPNLLVV 205 (353)
T ss_pred HHHh-------cCCEEEEeCCCCCCC-CC-CCHHHHHHHHHhCC--CcEEEEeCcccccCCc--ch-HHHHhhCCCEEEE
Confidence 3332 123456777766665 34 34455555554432 9999999999876421 11 111111122 33
Q ss_pred -eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHHHHh
Q 013204 270 -SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDG 347 (447)
Q Consensus 270 -~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l~~~ 347 (447)
+|||.++-.++++|++++++++++.+.... ....+++.+.+++.++.++++..+ -++..+++.++.+.+.+.
T Consensus 206 ~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 279 (353)
T PRK05387 206 QTFSKSRSLAGLRVGFAIGHPELIEALNRVK------NSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEE 279 (353)
T ss_pred EehhHhhcchhhhceeeecCHHHHHHHHHhh------ccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 589988743389999999999988876321 111245567778777777774211 123455566666677777
Q ss_pred HhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-----CEEEEecCCCCCHHHH
Q 013204 348 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSPEEV 422 (447)
Q Consensus 348 L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-----~~iR~~~~~~~t~e~i 422 (447)
|+++ ++ ......|.++.+.+... ....+.++|+++||.+...+ +.+|++. .+++++
T Consensus 280 L~~~---g~-~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~---~~~~~~ 340 (353)
T PRK05387 280 LEAL---GF-EVLPSKANFVFARHPSH------------DAAELAAKLRERGIIVRHFNKPRIDQFLRITI---GTDEEM 340 (353)
T ss_pred HHHC---CC-eECCCcCcEEEEECCCC------------CHHHHHHHHHHCCEEEEECCCCCCCCeEEEEe---CCHHHH
Confidence 7665 22 11233455555544321 14468888999999987553 4699993 378999
Q ss_pred HHHHHHHHHHHH
Q 013204 423 DELISKYGKALK 434 (447)
Q Consensus 423 ~~~~~~l~~~l~ 434 (447)
++++++|++++.
T Consensus 341 ~~~~~~L~~~~~ 352 (353)
T PRK05387 341 EALVDALKEILA 352 (353)
T ss_pred HHHHHHHHHHhh
Confidence 999999988754
No 192
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=7.3e-19 Score=168.49 Aligned_cols=283 Identities=12% Similarity=0.055 Sum_probs=178.5
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
+.+...+|.+.+++.+ ....++|++++|+++++..++++. .+ .++++.+|+|..+...+...+....
T Consensus 38 p~~~~~~lr~~ia~~~-~~~~~~I~it~Gs~~~l~~~~~~~---------~~-~~vv~~~P~y~~y~~~~~~~G~~v~-- 104 (332)
T PRK06425 38 PEISYTDIEDQIKIYT-QGLKIKVLIGPGLTHFIYRLLSYI---------NV-GNIIIVEPNFNEYKGYAFTHGIRIS-- 104 (332)
T ss_pred cCcCHHHHHHHHHHHh-CCCcceEEECCCHHHHHHHHHHHh---------CC-CcEEEeCCChHHHHHHHHHcCCeEE--
Confidence 4556788999999886 456788999999999999888642 22 3577779999888665554432211
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
.+++.. + .. +.+.++ .. +...+++++|.|++| ...+.+.+++|.++|
T Consensus 105 -----------~vp~~~-~-----~~--------~~~~l~----~~--~~k~v~l~nP~NPTG--~~~s~~~~~~l~~~a 151 (332)
T PRK06425 105 -----------ALPFNL-I-----NN--------NPEILN----NY--NFDLIFIVSPDNPLG--NLISRDSLLTISEIC 151 (332)
T ss_pred -----------EEeCCc-c-----cC--------cHHHHh----hc--CCCEEEEeCCCCCcC--CccCHHHHHHHHHHH
Confidence 111110 0 00 012222 11 233456667777666 456789999999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCC
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 311 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 311 (447)
++||+++|.||+|..|...+.........-.+.++ +|||.++-+++|+|++++++++++.+... . .++
T Consensus 152 ~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~-------~--~~~ 222 (332)
T PRK06425 152 RKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKI-------T--EPW 222 (332)
T ss_pred HHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHc-------C--CCC
Confidence 99999999999999884333111111111123333 68998883338999999999999888631 1 123
Q ss_pred CCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHH
Q 013204 312 SGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAY 390 (447)
Q Consensus 312 ~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 390 (447)
..+.+++.+ +.....-. .++..+.++++.+++.+.|+++ ++.....+.|.++.+.+.+ ...
T Consensus 223 ~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---g~~~~~~~~g~f~~~~~~~--------------~~~ 284 (332)
T PRK06425 223 SVCDPAIDF-IRSIDLDYVAKHSLDIMENERSYLINNLEAM---GFRAAGDPSANFITFMIPD--------------AHD 284 (332)
T ss_pred ccCHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC---CCEECCCCCceEEEEEcCC--------------HHH
Confidence 333333322 22211100 1234556666667777777665 2211113457777776541 345
Q ss_pred HHHHHHHcCceEEeeC-------CEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 391 FGAQCEKHGMLVRVSG-------DNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 391 ~~~~l~~~Gi~~~~~g-------~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
+.+.|+++||.+.++. +.+|++ ..++++.++++++|++.+
T Consensus 285 ~~~~l~~~gi~v~~~~~f~~~~~~~iRis---~~~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 285 FYSYLLKNGILVRLLDDYECLGEQYIRIA---IRRRSFNIKLVNALRNFL 331 (332)
T ss_pred HHHHHHHCCeEEEECCCCCCCCCCEEEEE---eCCHHHHHHHHHHHHHHh
Confidence 8889999999998752 469999 568899999999998765
No 193
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.86 E-value=1.5e-18 Score=170.51 Aligned_cols=337 Identities=12% Similarity=0.066 Sum_probs=200.4
Q ss_pred CCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc---CCC-CeEEEeCChh
Q 013204 30 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA---SKM-AKVFFTNSGS 105 (447)
Q Consensus 30 ~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~-~~v~~~~sGs 105 (447)
..|+.++||..|. ..++ .++.+.+++.+.+.....| ....+..+....+++.+.+.+.. .+. +++++++|++
T Consensus 25 ~~~~~~i~l~~~~--p~~~-~~~~~~~a~~~~~~~~~~Y-~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~ 100 (393)
T TIGR03538 25 PASKPPIALSIGE--PKHP-TPAFVLEALRENLHGLSTY-PTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTR 100 (393)
T ss_pred hcCCCeEEecCCC--CCCC-CCHHHHHHHHHHhhccCCC-CCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcH
Confidence 4688999998775 3444 4788999988876543222 22223344455555555544321 245 3799999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCc-ceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhH
Q 013204 106 EANDTQVKLVWYYNNALGRPNK-KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 184 (447)
Q Consensus 106 eA~~~Al~~~~~~~~~~~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (447)
+|+..+++++. +++. ..|++.+|+|.+....+...+... ..+++.....+.
T Consensus 101 ~al~~~~~~l~-------~~gd~~~vlv~~P~y~~~~~~~~~~g~~~-------------~~v~~~~~~~~~-------- 152 (393)
T TIGR03538 101 EALFAFAQAVI-------NPGQAPLVVMPNPFYQIYEGAALLAGAEP-------------YFLNCTAENGFL-------- 152 (393)
T ss_pred HHHHHHHHHHc-------CCCCcceEEecCCCCcchHHHHHhcCCeE-------------EEeeccccCCCC--------
Confidence 99999998763 1333 248888999987754433322211 111110000000
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc-cc-c-c--
Q 013204 185 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MF-G-C-- 259 (447)
Q Consensus 185 ~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~-~~-~-~-- 259 (447)
.+++++++.+.. +..++++++|.|++| .+.+.+.+++|.++|++|++++|.||+|..+...+. .. . .
T Consensus 153 ---~d~~~l~~~~~~---~~k~i~l~~p~NPtG--~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~ 224 (393)
T TIGR03538 153 ---PDFDAVPESVWR---RCQLLFVCSPGNPTG--AVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQA 224 (393)
T ss_pred ---CCHHHHHHHHhh---cceEEEEeCCCCCcC--cccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHh
Confidence 013566665542 233455666666665 456889999999999999999999999987643321 11 1 1
Q ss_pred -ccCCC--CCCee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhc
Q 013204 260 -DKYSI--KPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERN 332 (447)
Q Consensus 260 -~~~~~--~~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~ 332 (447)
...+. .+.++ +|||.++.+++++|++++++++++.+... ....+++.+++.+.++.+++..-+ -..
T Consensus 225 ~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 297 (393)
T TIGR03538 225 AAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRY-------RTYHGCAMPIPTQLASIAAWNDEQHVRE 297 (393)
T ss_pred cccccccccccEEEEecchhhcCCcccceEEEecCHHHHHHHHHH-------HHhhccCcCHHHHHHHHHHhcChHHHHH
Confidence 11111 12233 58998765559999999999998877531 111234556677777666663110 112
Q ss_pred HHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeC-----
Q 013204 333 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG----- 406 (447)
Q Consensus 333 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g----- 406 (447)
..+.++++.+.+.+.|++. ..+ .....|.++.+.++. . ...+.+.++ ++||.+.++.
T Consensus 298 ~~~~~~~~~~~~~~~L~~~--~~~--~~p~gg~f~~~~~~~-~------------~~~~~~~l~~~~gV~v~pg~~f~~~ 360 (393)
T TIGR03538 298 NRALYREKFAAVLEILGQV--LDL--ELPDAGFYLWPKVPG-D------------DEAFARALYEEENVTVLPGRFLARE 360 (393)
T ss_pred HHHHHHHHHHHHHHHHHhh--Ccc--cCCCeeEEEEEECCC-C------------HHHHHHHHHHHCCEEEeCCcccccc
Confidence 2344455555555555543 111 123346667777651 1 234777765 5799986541
Q ss_pred --------CEEEEecCCCCCHHHHHHHHHHHHHH
Q 013204 407 --------DNIMMSPPFIMSPEEVDELISKYGKA 432 (447)
Q Consensus 407 --------~~iR~~~~~~~t~e~i~~~~~~l~~~ 432 (447)
+.+|++ +..+++++++++++|.+.
T Consensus 361 ~~~~~~~~~~~Ris--~~~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 361 AEGVNPGEGRVRIA--LVAPLEECVEAAERIRSF 392 (393)
T ss_pred ccCCCCCCCEEEEE--ecCCHHHHHHHHHHHHHh
Confidence 469999 556899999999998764
No 194
>PRK02948 cysteine desulfurase; Provisional
Probab=99.85 E-value=4.6e-19 Score=173.50 Aligned_cols=335 Identities=18% Similarity=0.168 Sum_probs=200.7
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccc-c--Cc-CCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHH
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS-F--WN-RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 109 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~--~~-~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~ 109 (447)
.|+|..+. |..++.+++++.+.........+ . .+ ...+...++.+.+++++. .+.++++|++|+++++.
T Consensus 2 ~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g-~~~~~i~~~~g~t~a~~ 74 (381)
T PRK02948 2 IYLDYAAT------TPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIG-GEEQGIYFTSGGTESNY 74 (381)
T ss_pred EeccCCCC------CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEeCcHHHHHH
Confidence 47776443 45789999999988865321111 0 00 112345567778887763 45678999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhh---cccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS 186 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (447)
.++..+.... . .+++.|+ .+...|.+..... ...|... ..++....+
T Consensus 75 ~~~~~~~~~~---~-~~g~~vv-~~~~~h~s~~~~~~~~~~~g~~v------------~~v~~~~~~------------- 124 (381)
T PRK02948 75 LAIQSLLNAL---P-QNKKHII-TTPMEHASIHSYFQSLESQGYTV------------TEIPVDKSG------------- 124 (381)
T ss_pred HHHHHHHHhc---c-CCCCEEE-ECCcccHHHHHHHHHHHhCCCEE------------EEEeeCCCC-------------
Confidence 9988664210 0 1224444 4555555432221 1112111 111111100
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCC
Q 013204 187 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP 266 (447)
Q Consensus 187 ~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~ 266 (447)
..+++++++.+. +.+.+|+++.+++++|.+.+ +++|.++|+++|+++++|++++ +|..+ ..... ...
T Consensus 125 ~~d~~~l~~~l~----~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~vivD~~~~-~g~~~--~~~~~--~~~ 191 (381)
T PRK02948 125 LIRLVDLERAIT----PDTVLASIQHANSEIGTIQP----IAEIGALLKKYNVLFHSDCVQT-FGKLP--IDVFE--MGI 191 (381)
T ss_pred CCCHHHHHHhcC----CCCEEEEEECCcCCcEeehh----HHHHHHHHHHcCCEEEEEChhh-ccccc--cCccc--CCC
Confidence 111366776654 24568888888888888877 8999999999999999999886 65432 22222 236
Q ss_pred Ceee--ecccCCCcccceeEEEeChhH-HHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh--hcHHHHHHHHH
Q 013204 267 DLVS--FAKALSSAYMPIGAILVSPEV-SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIA 341 (447)
Q Consensus 267 d~v~--~sK~l~gg~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~--~~~~~~~~~~~ 341 (447)
|+++ ++|.++ + .++|+++.++++ +..+.......+. ...++.+..+++++.++++.+.+ ++..++.++++
T Consensus 192 d~~~~s~~K~~g-p-~G~G~l~~~~~~~~~~~~~~~~~~~~---~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~ 266 (381)
T PRK02948 192 DSLSVSAHKIYG-P-KGVGAVYINPQVRWKPVFPGTTHEKG---FRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELR 266 (381)
T ss_pred CEEEecHHhcCC-C-CcEEEEEEcCCCCCCCcccCCCCCCC---cCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7664 569665 3 458898888775 1111110000111 12345677788888888876432 34567778888
Q ss_pred HHHHHhHhhccCCCceeeE-e--eeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-------------
Q 013204 342 PKFQDGVKAFSDSPIIGEI-R--GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------------- 405 (447)
Q Consensus 342 ~~l~~~L~~l~~~~~~~~~-~--~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------------- 405 (447)
+++++.|+++ ...+.... . ....++.+.+..- ....+...|.++||.++.+
T Consensus 267 ~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~~~~------------~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~ 333 (381)
T PRK02948 267 SYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTIKGI------------EGQYTMLECNRRGIAISTGSACQVGKQEPSKT 333 (381)
T ss_pred HHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEeCCC------------CHHHHHHhcccCCEEEEchHhcCCCCCCCCHH
Confidence 8888888776 22221110 0 0111222222210 1334666788899999842
Q ss_pred -----------CCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 406 -----------GDNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 406 -----------g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
++.+|+++...+|++|++++++.|+++++++
T Consensus 334 ~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 334 MLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred HHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2469999999999999999999999987654
No 195
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=6.7e-19 Score=170.68 Aligned_cols=320 Identities=14% Similarity=0.093 Sum_probs=196.7
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 111 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~A 111 (447)
++.++|+..+. ++++ .+|++.+++.+.+...... .++.....++.+.+++++.-...+++++++|+++++..+
T Consensus 25 ~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~----~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~ 97 (356)
T PRK04870 25 ATGMVKLDAME--NPYR-LPAELRAELGERLAEVALN----RYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLL 97 (356)
T ss_pred CCCceeCcCCC--CCCC-CCHHHHHHHHHHhhccccc----cCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHH
Confidence 56788986664 5666 5889999999888642211 112223467888888887422224799999999999888
Q ss_pred HHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHH
Q 013204 112 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191 (447)
Q Consensus 112 l~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (447)
++++. ..++.|++.+|+|.++...+...+.... .++..+.+. .+++
T Consensus 98 ~~~~~--------~~gd~vlv~~P~y~~~~~~~~~~g~~~~-------------~i~~~~~~~-------------~d~~ 143 (356)
T PRK04870 98 ALACA--------KPGATVLAPEPGFVMYRMSAKLAGLEFV-------------GVPLTADFT-------------LDLP 143 (356)
T ss_pred HHHhc--------CCCCEEEECCCCHHHHHHHHHHcCCEEE-------------EecCCCCCC-------------CCHH
Confidence 88653 3357899999999876544333222111 111110000 0136
Q ss_pred HHHHHHHhhCCCcEEEE-EEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee-
Q 013204 192 NLEDLILKEGPETIAAF-IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV- 269 (447)
Q Consensus 192 ~le~~l~~~~~~~~a~v-i~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v- 269 (447)
++++.+.. .++++| ++.|.|++ | ...+.+.+++|.++| ++++|+||+|..|.... +. ....-.+.++
T Consensus 144 ~l~~~~~~---~~~~~v~l~~p~NPt-G-~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~--~~-~~~~~~~~vi~ 212 (356)
T PRK04870 144 AMLAAIAE---HRPALVFLAYPNNPT-G-NLFDDADVERIIEAA---PGLVVVDEAYQPFAGDS--WL-PRLARFPNLLV 212 (356)
T ss_pred HHHHHhhc---CCCCEEEEcCCCCCC-C-CCCCHHHHHHHHHHC---CCEEEEECCchhhcCcc--hH-HHHhhCCCEEE
Confidence 67776653 233444 44465554 4 344667777777777 78999999998774221 11 0011112332
Q ss_pred --eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHHHH
Q 013204 270 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQD 346 (447)
Q Consensus 270 --~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l~~ 346 (447)
+||| ++..++|+|++++++++++.+... . ..+..+.+++.++..+++..+ -++..+.++++.+.+.+
T Consensus 213 ~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~-------~--~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~ 282 (356)
T PRK04870 213 MRTVSK-LGLAGLRLGYLAGHPAWIAELDKV-------R--PPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAA 282 (356)
T ss_pred Eecchh-hhhHHHhhhhhhCCHHHHHHHHHc-------c--CCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 5899 655448999999999998888632 1 234456677766666665221 12334555666666666
Q ss_pred hHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-------CEEEEecCCCCCH
Q 013204 347 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNIMMSPPFIMSP 419 (447)
Q Consensus 347 ~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-------~~iR~~~~~~~t~ 419 (447)
.|+++.+ +......|.++.+.+.. ...+.+.|.++||.+.++. +.+|++ ..+.
T Consensus 283 ~L~~~~~---~~~~~~~~~~~~~~~~~--------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis---~~~~ 342 (356)
T PRK04870 283 ALAALPG---VTVFPSAANFILVRVPD--------------AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVT---VGTP 342 (356)
T ss_pred HHHhCCC---cEECCCCCeEEEEECCC--------------HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEe---CCCH
Confidence 6665522 22233455666665541 2357788999999998652 469999 3488
Q ss_pred HHHHHHHHHHHHHH
Q 013204 420 EEVDELISKYGKAL 433 (447)
Q Consensus 420 e~i~~~~~~l~~~l 433 (447)
+++++++++|++++
T Consensus 343 ~~~~~l~~al~~~~ 356 (356)
T PRK04870 343 EENAQFLAALKAAL 356 (356)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998753
No 196
>PRK06855 aminotransferase; Validated
Probab=99.85 E-value=2.2e-18 Score=170.86 Aligned_cols=357 Identities=13% Similarity=0.089 Sum_probs=199.2
Q ss_pred CCCEEEecCCccccccCCC-CCHHHHHHHHHHHhcCC-cccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhhH
Q 013204 31 NGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEA 107 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGseA 107 (447)
.|+..+++..|.. ...+. .++.+.+++.+.+.+.. ..+....+..+....+++.+.+.+. ..++++|++++|+.+|
T Consensus 30 ~g~~~~~~~~G~p-~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a 108 (433)
T PRK06855 30 LGVKITWENIGDP-IAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA 108 (433)
T ss_pred ccccccccccCCC-cccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH
Confidence 3556677654421 11133 46677778877764421 1222223344445555555544322 2467799999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
+..++.++ ..++.|++.+|+|+++........+.... .++.... . .+ .
T Consensus 109 l~~~~~l~---------~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v------------~v~~~~~-------~---~~-~ 156 (433)
T PRK06855 109 IAKIYGLL---------RREARVIGPSPAYSTHSSAEAAHAGYPPV------------TYRLDPE-------N---NW-Y 156 (433)
T ss_pred HHHHHHhc---------CCCCeEEEeCCCCchHHHHHHHhcCCeEE------------EEecccc-------c---CC-C
Confidence 98887532 33578999999999865332221121110 0111000 0 00 0
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-cc-ccCCCC
Q 013204 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC-DKYSIK 265 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~~-~~~~~~ 265 (447)
.++++|++.+... ++..+++++.|.|++| ...+.+.+++|.++|++||+++|.||+|..+...+..+ .. ....-.
T Consensus 157 ~d~~~l~~~~~~~-~~~~~i~l~~P~NPTG--~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~ 233 (433)
T PRK06855 157 PDLDDLENKVKYN-PSIAGILLINPDNPTG--AVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDV 233 (433)
T ss_pred CCHHHHHHHHhcC-CCceEEEEECCCCCCC--cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcC
Confidence 0137788777531 2234567778877776 56788999999999999999999999999885444321 11 111101
Q ss_pred CCee--eecccCCCcccceeEEEeC-----h---hHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh----hh
Q 013204 266 PDLV--SFAKALSSAYMPIGAILVS-----P---EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK----ER 331 (447)
Q Consensus 266 ~d~v--~~sK~l~gg~~~~g~~~~~-----~---~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~----~~ 331 (447)
..++ +|||.++.+++++|+++++ + .+++.+.. ... ...+.+.+++.++.++++.-. -+
T Consensus 234 ~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~ 305 (433)
T PRK06855 234 PGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILN-------AKM-IEVCSTTLPQMAIPRIMSHPEYKNYLK 305 (433)
T ss_pred CeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHH-------hhc-cccCCChHHHHHHHHhhcCCcHHHHHH
Confidence 1122 5899997444999999972 2 23333321 011 123456677777766664211 01
Q ss_pred cHHHHHHHHHHHHHHhHhhccCCCceeeEeeee-eEEEEEeecCCC---CCCCCCC-C-c-----------chHHHHH-H
Q 013204 332 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKS---PNEPFPP-E-W-----------GIGAYFG-A 393 (447)
Q Consensus 332 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g-~~~~i~~~~~~~---~~~~~~~-~-~-----------~~~~~~~-~ 393 (447)
+....++++.+.+.+.|+++ +......+.| .++++.++.... ....+.. + . .....+. .
T Consensus 306 ~~~~~~~~r~~~~~~~L~~~---~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (433)
T PRK06855 306 ERNKRYEKRSNIAYEKLKDV---PGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYY 382 (433)
T ss_pred HHHHHHHHHHHHHHHHHhcC---CCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHH
Confidence 23344455555555555443 2233334444 566676654210 0000000 0 0 0022344 4
Q ss_pred HHHHcCceEEeeC------CEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 394 QCEKHGMLVRVSG------DNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 394 ~l~~~Gi~~~~~g------~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
.+.+.||.+.|+. +.+|++... .++++|++++++|.+.+++
T Consensus 383 l~~~~gV~v~PG~~F~~~~~~~Rls~~~-~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 383 LLASTGICVVPLSSFCTELNGFRVTLLE-RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred HHHHcCEEEecCCcCCCCCCceEEEECC-CcHHHHHHHHHHHHHHHHH
Confidence 4678899998762 359999432 5899999999999999865
No 197
>PRK03321 putative aminotransferase; Provisional
Probab=99.85 E-value=3.2e-19 Score=172.70 Aligned_cols=320 Identities=16% Similarity=0.175 Sum_probs=194.3
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHH
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVK 113 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~ 113 (447)
.++|+..+. ..+| .+|.+.+++.+.+.....+ +.....++.+.+++++. .+++++++++|.++++..++.
T Consensus 23 ~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y------~~~g~~~lr~~ia~~~~-~~~~~I~~~~G~~~~l~~~~~ 92 (352)
T PRK03321 23 GAIKLSSNE--TPFG-PLPSVRAAIARAAAGVNRY------PDMGAVELRAALAEHLG-VPPEHVAVGCGSVALCQQLVQ 92 (352)
T ss_pred cceeccCCC--CCCC-CCHHHHHHHHHHHHhcCcC------CCCcHHHHHHHHHHHhC-cCHHHEEECCCHHHHHHHHHH
Confidence 478887664 3455 4678999988876543222 23346678888888873 456789999888888887776
Q ss_pred HHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHH
Q 013204 114 LVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 193 (447)
Q Consensus 114 ~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 193 (447)
... .+++.|++..++|..+...... .|... ..++....+. .+++++
T Consensus 93 ~~~--------~~gd~Vli~~p~y~~~~~~~~~-~g~~~------------~~v~~~~~~~-------------~~~~~l 138 (352)
T PRK03321 93 ATA--------GPGDEVIFAWRSFEAYPILVQV-AGATP------------VQVPLTPDHT-------------HDLDAM 138 (352)
T ss_pred Hhc--------CCCCEEEeCCCCHHHHHHHHHH-cCCEE------------EEccCCCCCC-------------CCHHHH
Confidence 543 3347788888887544222211 12111 1111110000 013666
Q ss_pred HHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHh--cCCEEEEehhhcCCCccccc-cccccCCCCCCee-
Q 013204 194 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFGRLGTM-FGCDKYSIKPDLV- 269 (447)
Q Consensus 194 e~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~--~g~~li~DEv~~g~g~~g~~-~~~~~~~~~~d~v- 269 (447)
++.+. + ++.+|+++..++.+|.+.+ .+++.++|+. +++++|+||+|.+|...+.. .........++++
T Consensus 139 ~~~~~---~-~~~~v~l~~p~NPtG~~~~----~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~ 210 (352)
T PRK03321 139 AAAIT---D-RTRLIFVCNPNNPTGTVVT----PAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVV 210 (352)
T ss_pred HHhhc---c-CCCEEEEeCCCCCcCCCcC----HHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEE
Confidence 66654 2 3344444444555565554 4455555554 69999999999877544321 1122222234555
Q ss_pred --eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHH
Q 013204 270 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQD 346 (447)
Q Consensus 270 --~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~~~~~~~~~~~~l~~ 346 (447)
+|||.++.+++|+|++++++++++.+... ..+++.+.+++.++.++++..+. .+..+.+.+..+.+.+
T Consensus 211 ~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~---------~~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~ 281 (352)
T PRK03321 211 LRTFSKAYGLAGLRVGYAVGHPEVIAALRKV---------AVPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRA 281 (352)
T ss_pred EecchHHhhhHHHhhhhhcCCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 58999984338999999999999988631 13566788888888777752111 1112223333344555
Q ss_pred hHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEEEecCCCCCHHHHHHH
Q 013204 347 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDEL 425 (447)
Q Consensus 347 ~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR~~~~~~~t~e~i~~~ 425 (447)
.|++. +.. .....|.++.+.+... ...+.+.|.++||.+.+.+ +.+|++ ..+.++++++
T Consensus 282 ~L~~~---~~~-~~~~~g~~i~i~l~~~-------------~~~~~~~l~~~gI~v~~~~~~~iRi~---~~~~~~~~~~ 341 (352)
T PRK03321 282 ALRAA---GWT-VPPSQANFVWLPLGER-------------TADFAAAAAEAGVVVRPFAGEGVRVT---IGAPEENDAF 341 (352)
T ss_pred HHHHC---CCc-cCCCCCCEEEEeCCCC-------------HHHHHHHHHHCCEEEEccCCCcEEEe---eCCHHHHHHH
Confidence 55543 221 1233467766665321 3458888999999999875 469999 4799999999
Q ss_pred HHHHHHHHH
Q 013204 426 ISKYGKALK 434 (447)
Q Consensus 426 ~~~l~~~l~ 434 (447)
+++|++++.
T Consensus 342 ~~al~~~~~ 350 (352)
T PRK03321 342 LRAARAWRA 350 (352)
T ss_pred HHHHHHHhc
Confidence 999988754
No 198
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.85 E-value=2.9e-18 Score=168.56 Aligned_cols=321 Identities=15% Similarity=0.124 Sum_probs=189.3
Q ss_pred CCHHHHHHHHHHH-hcCCc---ccccCcCCChHHHHHHH----HHHHhcCcCCCCeEE-EeCChhhHHHHHHHHHHHHHH
Q 013204 50 SEPRLVAAATAQL-NTLPF---YHSFWNRTTKPSLDLAK----ELLEMFTASKMAKVF-FTNSGSEANDTQVKLVWYYNN 120 (447)
Q Consensus 50 ~~p~v~~a~~~~~-~~~~~---~~~~~~~~~~~~~~l~~----~l~~~~~~~~~~~v~-~~~sGseA~~~Al~~~~~~~~ 120 (447)
-||.+++++...+ .++.. +++..++ ++...++++ ++++++ +.+.++ +++||+.||..++....
T Consensus 40 ~~p~v~~a~~~~~~~~~~~g~~gsr~~~G-~~~~~~lE~~~~~~la~l~---g~~~alv~~~SG~~A~~~~l~al~---- 111 (416)
T PRK13034 40 TSPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEFVDEVEALAIERAKQLF---GCDYANVQPHSGSQANGAVYLALL---- 111 (416)
T ss_pred CCHHHHHHhcchhhcCCCCCCCCCcccCC-ChHHHHHHHHHHHHHHHHh---CCCceEEecCCcHHHHHHHHHHhc----
Confidence 4899999999995 55433 2334344 577888888 888887 344664 56899999999998763
Q ss_pred hcCCCCcceEEEEcCCCccchhhhhccc-CCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHh
Q 013204 121 ALGRPNKKKFIARQKSYHGSTLIAASLS-GLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK 199 (447)
Q Consensus 121 ~~~~~~~~~vi~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 199 (447)
.+++.|++...++.+........+ ....+. ....+... . ....+++++++.+..
T Consensus 112 ----~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~~~~~------~------~~~~d~~~le~~l~~ 166 (416)
T PRK13034 112 ----KPGDTILGMSLSHGGHLTHGAKVSLSGKWYN---------AVQYGVDR------L------TGLIDYDEVEELAKE 166 (416)
T ss_pred ----CCCCEEEEcCccceeeeecCCcceeccceee---------eEEccccc------c------cCCcCHHHHHHHHhh
Confidence 345677776655544221111100 000000 00000000 0 001124777777754
Q ss_pred hCCCcEEEEEE-ccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCC
Q 013204 200 EGPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALS 276 (447)
Q Consensus 200 ~~~~~~a~vi~-epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~ 276 (447)
. ++++|++ ++++++ ..+ +++|.++|++||++||+|++|+ +|..+.+......+ ..|+++ ++|.++
T Consensus 167 ~---~~klVi~~~~~~g~---~~d----l~~l~~la~~~g~~livD~Aha-~G~~~~g~~~~~~~-~~Di~~~s~~K~l~ 234 (416)
T PRK13034 167 H---KPKLIIAGFSAYPR---ELD----FARFREIADEVGALLMVDMAHI-AGLVAAGEHPNPFP-HAHVVTTTTHKTLR 234 (416)
T ss_pred c---CCeEEEECCCcccc---ccC----HHHHHHHHHHcCCEEEEeCccc-ccCcccCCCCCCCC-CceEEEEeCcccCC
Confidence 2 2456666 555543 333 8999999999999999999997 66555322111111 367664 579997
Q ss_pred CcccceeEEEeChh-HHHHhhhccCCCCccCcCCCCCCcHHHHH-HHHHHHHHHhh--hcHHHHHHHHHHHHHHhHhhcc
Q 013204 277 SAYMPIGAILVSPE-VSEVIHSQSNTLGSFSHGFTYSGHPVSCA-VAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFS 352 (447)
Q Consensus 277 gg~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~~~~-aa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~ 352 (447)
|+ ..|+++++++ +.+.++. ....+.+....+...+ ++.+.++.+.. +++.+++.++.++|++.|+++
T Consensus 235 g~--~GG~v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~- 305 (416)
T PRK13034 235 GP--RGGMILTNDEEIAKKINS------AVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER- 305 (416)
T ss_pred CC--CCeEEEECcHHHHHHHHh------hcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-
Confidence 64 2366666554 4444432 1111111122233333 33444444422 345788999999999999876
Q ss_pred CCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-----------CCEEEEecCC----CC
Q 013204 353 DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------GDNIMMSPPF----IM 417 (447)
Q Consensus 353 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----------g~~iR~~~~~----~~ 417 (447)
+.++... .....+..+.+.+.... ...+.++|.+.||++... ...+|++++. .+
T Consensus 306 G~~~~~~-~~~t~i~~v~~~~~~~~----------~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~ 374 (416)
T PRK13034 306 GYDLVSG-GTDNHLLLVDLRPKGLS----------GKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGF 374 (416)
T ss_pred CCEeccC-CCCCcEEEEEcCCCCCC----------HHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCC
Confidence 3333211 12344555666543211 334667888899999741 2469999888 78
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 013204 418 SPEEVDELISKYGKALKA 435 (447)
Q Consensus 418 t~e~i~~~~~~l~~~l~~ 435 (447)
+++||+++++.|++++.+
T Consensus 375 ~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 375 GEAEFREIANWILDVLDD 392 (416)
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 899999999999988864
No 199
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.85 E-value=1.9e-18 Score=169.12 Aligned_cols=340 Identities=17% Similarity=0.210 Sum_probs=195.7
Q ss_pred EEecCCccccccCCCCCHHHHHHHHHHHhcCCcc-cccCcCCChHHHHHHHHHHHhc---CcCCCCeEEEeCChhhHHHH
Q 013204 35 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWNRTTKPSLDLAKELLEMF---TASKMAKVFFTNSGSEANDT 110 (447)
Q Consensus 35 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~v~~~~sGseA~~~ 110 (447)
|+|..++. ..++.|++++.+...+.... ++...........+.+.+.+.. ...++++++|++|+++++..
T Consensus 2 yld~aa~~------~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~ 75 (382)
T TIGR03403 2 YLDNNATT------MLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNW 75 (382)
T ss_pred cccCcCCC------CCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 67765552 36789999999988753221 1111111222334444433333 21256799999999999999
Q ss_pred HHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh--hcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHH
Q 013204 111 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA--ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 188 (447)
Q Consensus 111 Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (447)
+++.+..... .++++++|++....|+...... +...|.. +..++.++.+. .
T Consensus 76 ~~~~~~~~~~--~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~------------v~~v~~~~~g~-------------~ 128 (382)
T TIGR03403 76 VLKGVYFDEI--LKGGKNHIITTEVEHPAVRATCAFLESLGVE------------VTYLPINEQGT-------------I 128 (382)
T ss_pred HHHHHHHhhc--ccCCCCEEEEcCCccHHHHHHHHHHHHCCCE------------EEEEecCCCCC-------------C
Confidence 9886521000 0123355666554443332211 1111111 11122211100 0
Q ss_pred HHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCe
Q 013204 189 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL 268 (447)
Q Consensus 189 ~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~ 268 (447)
+++++++.+. +++++|++..+++.+|.+.+ +++|.++|++||+++++|++|. +|.. . .+.....+|+
T Consensus 129 d~~~l~~~i~----~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~g~~--~--~~~~~~~~D~ 195 (382)
T TIGR03403 129 TAEQVREAIT----EKTALVSVMWANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-IGKI--P--VDVQKAGVDF 195 (382)
T ss_pred CHHHHHHhcc----cCCeEEEEEcccCCCccccC----HHHHHHHHHHcCCEEEEechhh-cCCC--c--cCccccCCCE
Confidence 1366666664 24567778777778888877 8999999999999999999987 4322 1 2222345788
Q ss_pred eeec--ccCCCcccceeEEEeChhHH--HHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh--hcHHHHHHHHHH
Q 013204 269 VSFA--KALSSAYMPIGAILVSPEVS--EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAP 342 (447)
Q Consensus 269 v~~s--K~l~gg~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~--~~~~~~~~~~~~ 342 (447)
+++| |.+ |+ .++|+++.+++.. ..+.. ...... ....+.+..++.++.++++...+ +...++.+.+.+
T Consensus 196 ~~~s~~K~~-gp-~G~g~l~vr~~~~~~p~~~g-~~~~~~---~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~ 269 (382)
T TIGR03403 196 LSFSAHKFH-GP-KGVGGLYIRKGVELTPLFHG-GEHMGG---RRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRD 269 (382)
T ss_pred EEEcchhhC-CC-CceEEEEECCCCCCCCcccC-CCCCCC---cccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 8887 953 43 4578888776531 11100 000001 12345666777666777765543 233466666777
Q ss_pred HHHHhHhhccCCCceeeEe-eeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee----------------
Q 013204 343 KFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------------- 405 (447)
Q Consensus 343 ~l~~~L~~l~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---------------- 405 (447)
++++.|+++....+..... ....++.+.+.... ...+.+.|.++||.++.+
T Consensus 270 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~ 337 (382)
T TIGR03403 270 RLEDALLELPDVFVVGDREHRVPNTILISIKGVE------------GEAMLWDLNKAGIAASTGSACASEDLEANPVMVA 337 (382)
T ss_pred HHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCC------------HHHHHHhhccCCEEEEchhccCCCCCCcCHHHHH
Confidence 7777776653222221110 11234444443211 345667788999999842
Q ss_pred --------CCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 406 --------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 406 --------g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
++.||++++..+|++|||+++++|++++++++.
T Consensus 338 ~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~~ 378 (382)
T TIGR03403 338 IGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLRA 378 (382)
T ss_pred cCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 145999999999999999999999998887653
No 200
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.85 E-value=5.4e-19 Score=171.99 Aligned_cols=334 Identities=15% Similarity=0.166 Sum_probs=197.6
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHHHh---cCCcccccCcCCChHHHHHHHHHHHhcC-----cCCCC-eEEEeCCh
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQLN---TLPFYHSFWNRTTKPSLDLAKELLEMFT-----ASKMA-KVFFTNSG 104 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----~~~~~-~v~~~~sG 104 (447)
+.|||.++. ..++++||.+.+++.+..+ ..... ....+.....++.+.+++++. ....+ .+++++|.
T Consensus 2 ~~I~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~ 77 (363)
T PF00155_consen 2 DVINLGSNA--PLLLSQNPPPPAAIKAAIRGAATSSSF--LGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGA 77 (363)
T ss_dssp TEEESSSSS--TSSTTSSHHHHHHHHHHHHHHHHHTGC--TSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHH
T ss_pred CEEEEECCC--CCCcccccchHHHHHHHHHHhhccccc--ccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccc
Confidence 468887774 3344456655555444433 11100 112244456778888887764 13456 67777655
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhH
Q 013204 105 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 184 (447)
Q Consensus 105 seA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (447)
.+++..++.+.. . .+++.|++.+|.|.+........ |.....-.+ +..+.+
T Consensus 78 ~~~~~~~~~~~~------~-~~~~~vlv~~P~y~~~~~~~~~~-g~~~~~~~~----------~~~~~~----------- 128 (363)
T PF00155_consen 78 QAALFLLLRLLK------I-NPGDTVLVPDPCYPSYIEAARLL-GAEVIPVPL----------DSENDF----------- 128 (363)
T ss_dssp HHHHHHHHHHHH------S-STTSEEEEEESSSTHHHHHHHHT-TSEEEEEEE----------EETTTT-----------
T ss_pred ccchhhhhhccc------c-cccccceecCCcccccccccccc-Cceeeeccc----------cccccc-----------
Confidence 555555555442 1 34578999999998875444432 222111000 000000
Q ss_pred HHHHHHHHHHHHHHhhCCC--cEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccc--cc
Q 013204 185 YSTRLANNLEDLILKEGPE--TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG--CD 260 (447)
Q Consensus 185 ~~~~~~~~le~~l~~~~~~--~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~--~~ 260 (447)
+.++++|++.+.+..++ ++.+|+++..++.+| ...+.+.+++|.++|++||+++|+||+|.++......+. ..
T Consensus 129 --~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG-~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 205 (363)
T PF00155_consen 129 --HLDPEALEEALDELPSKGPRPKAVLICNPNNPTG-SVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRS 205 (363)
T ss_dssp --EETHHHHHHHHHTSHTTTETEEEEEEESSBTTTT-BB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHG
T ss_pred --cccccccccccccccccccccceeeecccccccc-cccccccccchhhhhcccccceeeeeceeccccCCCccCcccc
Confidence 11147888888764333 245666666666666 456889999999999999999999999997633322111 11
Q ss_pred cCCCCCCee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-----hhc
Q 013204 261 KYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-----ERN 332 (447)
Q Consensus 261 ~~~~~~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-----~~~ 332 (447)
...-.++++ ++||.++..++++|++++++++++.+... .. ++..+.+.+.++.+.+.... -++
T Consensus 206 ~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~-------~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 276 (363)
T PF00155_consen 206 LLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIERLRRF-------QR--SGLSSSPMQAAAAAALSDPELVEKWLEE 276 (363)
T ss_dssp HHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHHHHHHH-------HH--HTTSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccceeeeeccccccccccccccccchhhhhhhhhhc-------cc--cccccchhhHHHHHhhhccccccccccc
Confidence 112223333 57899986559999999999998888642 11 22224455554444444222 133
Q ss_pred HHHHHHHHHHHHHHhHhhccCCCceeeEee-eeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHc-CceEEeeC----
Q 013204 333 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVSG---- 406 (447)
Q Consensus 333 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~g---- 406 (447)
..+.++++.+++.+.|++. +.. ...+ .|.+..+.+... ....+.++|+++ ||.+.++.
T Consensus 277 ~~~~l~~~~~~l~~~L~~~---~~~-~~~~~~~~~~~~~~~~~------------~~~~l~~~L~~~~gi~v~pg~~~~~ 340 (363)
T PF00155_consen 277 LRERLRENRDLLREALEEI---GIT-VLPPEAGFFLWVRLDPN------------DAEELAQELLEEYGILVRPGSYFGV 340 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TSE-EEHHSBSSEEEEEESHH------------HHHHHHHHHHHHHTEEEEEGGGGTS
T ss_pred chhhHHHHHHHHHHHHHHh---hhh-eeeccCccEEEEEcccc------------hHHHHHHHHHHhCCEEEEecCCCCC
Confidence 5566677777777777665 222 2222 344555555432 145688889988 99999853
Q ss_pred -CEEEEecCCCCCHHHHHHHHHHH
Q 013204 407 -DNIMMSPPFIMSPEEVDELISKY 429 (447)
Q Consensus 407 -~~iR~~~~~~~t~e~i~~~~~~l 429 (447)
+.+|++. ..++++++++++++|
T Consensus 341 ~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 341 PGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp TTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred CCEEEEEe-ccCCHHHHHHHHhhC
Confidence 5799996 489999999999986
No 201
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.85 E-value=3.7e-18 Score=168.41 Aligned_cols=344 Identities=10% Similarity=0.036 Sum_probs=194.1
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCC-----cccccCcCCChHHHHHHHHHHHhc----C-cCCCCeEEEe
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-----FYHSFWNRTTKPSLDLAKELLEMF----T-ASKMAKVFFT 101 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~----~-~~~~~~v~~~ 101 (447)
+..++|+..+. ..++ .+|.+.+++.+.+.... ..+. +.....+|.+.+++++ . ...+++|+++
T Consensus 33 ~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~----~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it 105 (409)
T PRK07590 33 EAKIIRLGIGD--VTQP-LPPAVIEAMHKAVDEMGTAETFRGYG----PEQGYDFLREKIAENDYQARGCDISADEIFIS 105 (409)
T ss_pred CCceEEecCcC--CCCC-CCHHHHHHHHHHHhcccccCCccCCC----CCCCCHHHHHHHHHHHHHhcCCcCChhhEEEC
Confidence 56789987764 3344 57888999988876521 1111 2222334444444442 1 3567899999
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCC
Q 013204 102 NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 181 (447)
Q Consensus 102 ~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (447)
+|+.+++...+.++ .++++|++.+|+|.+........+.... ....+. ...+..++......
T Consensus 106 ~Ga~~al~~l~~~~---------~~gd~V~v~~P~Y~~~~~~~~~~g~~~~-~~~~~~-~~~~~~v~~~~~~~------- 167 (409)
T PRK07590 106 DGAKCDTGNILDIF---------GPDNTIAVTDPVYPVYVDTNVMAGRTGE-ANEDGR-YSGIVYLPCTAENN------- 167 (409)
T ss_pred CCHHHHHHHHHHhc---------CCCCEEEEeCCCCcchHHHHHHcCCccc-cccccc-ccceeEeecccccC-------
Confidence 99999988754322 2347899999999987654443332100 000000 00011122110000
Q ss_pred hhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccc-ccc-
Q 013204 182 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGC- 259 (447)
Q Consensus 182 ~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~-~~~- 259 (447)
+ ..++++ ++..+++++.|.|++| ...+.+.+++|.++|++|++++|.||+|..|-..+.. ...
T Consensus 168 ---~----~~d~~~------~~~k~i~l~nP~NPTG--~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~ 232 (409)
T PRK07590 168 ---F----VPELPE------EKVDIIYLCFPNNPTG--TVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIY 232 (409)
T ss_pred ---C----cccCcc------cCceEEEEeCCCCCcC--CcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchh
Confidence 0 011111 1233455566766665 5668899999999999999999999999977433321 111
Q ss_pred ccCCCCCCee---eecccCCCcccceeEEEeChhHHHHhhhccC----CCCccCcCCCC-CCcHHHHHHHHHHHHH-H--
Q 013204 260 DKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSN----TLGSFSHGFTY-SGHPVSCAVAIEALKI-Y-- 328 (447)
Q Consensus 260 ~~~~~~~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~t~-~~~~~~~~aa~a~l~~-~-- 328 (447)
...+....++ +|||.++.+++++|++++++++++.+..... .........++ +.+.+++.++.++++. .
T Consensus 233 ~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~ 312 (409)
T PRK07590 233 EIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKA 312 (409)
T ss_pred hCCCcccceEEEecCccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHH
Confidence 1111111223 6899997444999999999998863210000 00000011122 3456677666666541 0
Q ss_pred hhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeee-eeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeC
Q 013204 329 KERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG 406 (447)
Q Consensus 329 ~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g 406 (447)
.-++..+.++++.+.+.+.|++. + +....+. |.++++.+.... ....+...++ +.||++.++.
T Consensus 313 ~~~~~~~~~~~~r~~l~~~L~~~---~-~~~~~~~g~~f~wi~~~~~~-----------~~~~~~~~l~~~~gv~v~pg~ 377 (409)
T PRK07590 313 QIKELIDYYMENAKIIREGLESA---G-FEVYGGVNAPYIWVKTPDGM-----------SSWDFFDKLLQEANVVGTPGS 377 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc---C-CceecCCcceEEEEECCCCC-----------CHHHHHHHHHHHCCEEEeChh
Confidence 01233455566666666666654 2 1223333 456677765421 1334666666 5699988752
Q ss_pred -------CEEEEecCCCCCHHHHHHHHHHHHHH
Q 013204 407 -------DNIMMSPPFIMSPEEVDELISKYGKA 432 (447)
Q Consensus 407 -------~~iR~~~~~~~t~e~i~~~~~~l~~~ 432 (447)
+.+|++ +..+++++++++++|.++
T Consensus 378 ~f~~~~~~~iRi~--~~~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 378 GFGPSGEGYFRLS--AFGSRENVLEAMERIKKA 408 (409)
T ss_pred HhCCCCCCEEEEE--ccCCHHHHHHHHHHHHhh
Confidence 469999 567899999999999775
No 202
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.85 E-value=1.5e-18 Score=168.30 Aligned_cols=322 Identities=18% Similarity=0.182 Sum_probs=194.7
Q ss_pred CCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcce
Q 013204 50 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 129 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~ 129 (447)
.++++.+++.+.+.. +.. ....+...++++.+++.+.......+++++||++|+..++.... ..++.
T Consensus 10 ~~~~v~~a~~~~~~~----~~~-~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~--------~~g~~ 76 (356)
T cd06451 10 VPPRVLKAMNRPMLG----HRS-PEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLL--------EPGDK 76 (356)
T ss_pred CCHHHHHHhCCCccC----CCC-HHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhC--------CCCCE
Confidence 467777777544321 110 11234466788888888743233457899999999999987653 23467
Q ss_pred EEEEcCCCccch-hhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEE
Q 013204 130 FIARQKSYHGST-LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF 208 (447)
Q Consensus 130 vi~~~~~yhg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~v 208 (447)
|++..+++++.. .......|... ..++....+ ..+.+++++.+.. .++++|
T Consensus 77 vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~-------------~~~~~~l~~~i~~---~~~~~v 128 (356)
T cd06451 77 VLVGVNGVFGDRWADMAERYGADV------------DVVEKPWGE-------------AVSPEEIAEALEQ---HDIKAV 128 (356)
T ss_pred EEEecCCchhHHHHHHHHHhCCCe------------EEeecCCCC-------------CCCHHHHHHHHhc---cCCCEE
Confidence 888777666532 12221122111 111111000 0113677776652 245566
Q ss_pred EEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeee--cccCCCcccceeEEE
Q 013204 209 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYMPIGAIL 286 (447)
Q Consensus 209 i~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~--sK~l~gg~~~~g~~~ 286 (447)
++..+++..|.+.+ +++|.++|++||+++++|++|. +|.. ...... ..+|+++. +|.++++ .++|+++
T Consensus 129 ~i~~~~~~~G~~~~----~~~i~~~a~~~~~~li~D~~~~-~g~~--~~~~~~--~~~d~~~~s~~K~l~~p-~g~G~l~ 198 (356)
T cd06451 129 TLTHNETSTGVLNP----LEGIGALAKKHDALLIVDAVSS-LGGE--PFRMDE--WGVDVAYTGSQKALGAP-PGLGPIA 198 (356)
T ss_pred EEeccCCCcccccC----HHHHHHHHHhcCCEEEEeeehh-ccCc--cccccc--cCccEEEecCchhccCC-CCcceeE
Confidence 66666666777766 9999999999999999999986 5432 222222 23576654 6999986 5789999
Q ss_pred eChhHHHHhhhccCCCCcc---------Cc---CCCCCCcHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHhHhhc
Q 013204 287 VSPEVSEVIHSQSNTLGSF---------SH---GFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAF 351 (447)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~---------~~---~~t~~~~~~~~~aa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~l 351 (447)
.++++++.+...+...+.+ .. ....+.++..+.++.++++.+... ...++.+++.+++++.|+++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 278 (356)
T cd06451 199 FSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL 278 (356)
T ss_pred ECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999887765200000000 00 112234555666667777765543 45567777888888888775
Q ss_pred cCCCceeeEee-eeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHc-CceEEee-----CCEEEEecCCCCCHHHHHH
Q 013204 352 SDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS-----GDNIMMSPPFIMSPEEVDE 424 (447)
Q Consensus 352 ~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~-----g~~iR~~~~~~~t~e~i~~ 424 (447)
...+...... .+.+..+.+.... ....+.+.|.++ ||.+.++ ++.+|++++..+|++|+++
T Consensus 279 -g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~ 346 (356)
T cd06451 279 -GLKLLAKPELRSPTVTAVLVPEGV-----------DGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLG 346 (356)
T ss_pred -CCeeccCcccCCCceEEEECCCCC-----------CHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHH
Confidence 2222211111 1222223332111 144688899998 9998753 3579999999999999999
Q ss_pred HHHHHHHHHH
Q 013204 425 LISKYGKALK 434 (447)
Q Consensus 425 ~~~~l~~~l~ 434 (447)
++++|+++++
T Consensus 347 ~~~~l~~~~~ 356 (356)
T cd06451 347 VLSALEEALK 356 (356)
T ss_pred HHHHHHHHhC
Confidence 9999998763
No 203
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.84 E-value=3.8e-18 Score=168.33 Aligned_cols=341 Identities=14% Similarity=0.134 Sum_probs=204.7
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHHHhcCCcc-cc-cC---cCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHH
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HS-FW---NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN 108 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~-~~---~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~ 108 (447)
.|+|..+. |..++.+.+++.+.+...... +. .. ........++.+.+++++.....++++|++|+++++
T Consensus 20 ~yld~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l 93 (403)
T TIGR01979 20 VYLDSAAT------SQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESI 93 (403)
T ss_pred EEEeCccc------cCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHH
Confidence 68886433 446789999998877542111 11 00 001123456777888877433356899999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhh---hhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHH
Q 013204 109 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI---AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 185 (447)
Q Consensus 109 ~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (447)
..++..+... ....++.||+.++.|+..... .....|... ..++....+.
T Consensus 94 ~~~~~~~~~~----~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~------------~~v~~~~~~~----------- 146 (403)
T TIGR01979 94 NLVAYSWGDS----NLKAGDEIVISEMEHHANIVPWQLLAERTGATL------------KFIPLDDDGT----------- 146 (403)
T ss_pred HHHHHHhhhh----cCCCCCEEEECcchhhHHHHHHHHHHHhcCcEE------------EEEecCCCCC-----------
Confidence 8888754210 002346777777766654321 111112111 1111111000
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCC
Q 013204 186 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK 265 (447)
Q Consensus 186 ~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~ 265 (447)
.+++++++.+. +++++|++..+++..|.+.+ +++|.++|++||+++|+|++|+ +|.. .... ....
T Consensus 147 --~~~~~l~~~i~----~~~~lv~~~~~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~g~~--~~~~--~~~~ 211 (403)
T TIGR01979 147 --LDLDDLEKLLT----EKTKLVAITHVSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQA-VPHM--PVDV--QALD 211 (403)
T ss_pred --CCHHHHHHHhc----cCCeEEEEEcccccccccCC----HHHHHHHHHHcCCEEEEEchhh-cCcc--ccCc--cccC
Confidence 01366666664 35667778877778888877 9999999999999999999986 4322 1112 2234
Q ss_pred CCeeee--cccCCCcccceeEEEeChhHHHHhhhccC---CCC-------cc----CcCCCCCCcHHHHHHHHHHHHHHh
Q 013204 266 PDLVSF--AKALSSAYMPIGAILVSPEVSEVIHSQSN---TLG-------SF----SHGFTYSGHPVSCAVAIEALKIYK 329 (447)
Q Consensus 266 ~d~v~~--sK~l~gg~~~~g~~~~~~~~~~~~~~~~~---~~~-------~~----~~~~t~~~~~~~~~aa~a~l~~~~ 329 (447)
+|++++ +|.++ + .++|++++++++++.+..... ... .+ .....-+.+..+++++.++++.+.
T Consensus 212 ~d~~~~s~~K~~g-p-~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~ 289 (403)
T TIGR01979 212 CDFYVFSGHKMYG-P-TGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLE 289 (403)
T ss_pred CCEEEEecccccC-C-CCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHH
Confidence 787754 59664 3 468999999887776531100 000 00 000011345556666677777665
Q ss_pred h---hcHHHHHHHHHHHHHHhHhhccCCCceeeE--eeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEe
Q 013204 330 E---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI--RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV 404 (447)
Q Consensus 330 ~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~--~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~ 404 (447)
+ +...++..++.+++++.|+++....+.... ...+.++.+.+.... ...+.+.|.++||.++.
T Consensus 290 ~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~------------~~~~~~~L~~~gI~v~~ 357 (403)
T TIGR01979 290 AIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVH------------PHDVGTILDEEGIAVRS 357 (403)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcC------------HHHHHHHHhhCCEEEcc
Confidence 4 345677777778888777765322222111 122456666654211 33577888899998875
Q ss_pred e-------------CCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 405 S-------------GDNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 405 ~-------------g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
+ .+.+|+++++.+|++|+++++++|+++++.+
T Consensus 358 g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 358 GHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred hhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 3 2569999999999999999999999877653
No 204
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.84 E-value=1.5e-18 Score=171.02 Aligned_cols=332 Identities=13% Similarity=0.082 Sum_probs=195.4
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcc----cccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY----HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN 108 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~ 108 (447)
..|+|..+. |..++.+++++.+.+...... +.......+...++.+.+++++. .+.+.+++++|+++++
T Consensus 18 ~~yl~~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~-~~~~~v~~~~~~t~~l 90 (397)
T TIGR01976 18 RVFFDNPAG------TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLN-ADPPEVVFGANATSLT 90 (397)
T ss_pred eEEecCCcc------CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcC-CCCCeEEEeCCHHHHH
Confidence 478887433 346889999999988653211 10001112345678888888874 3445799999999998
Q ss_pred HHHHHHHHHHHHhcCCCCcceEEEEcCCCccchh---hhhcccCCccccCCCCCCCCcceecCCCC-cccCCCCCCChhH
Q 013204 109 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL---IAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEE 184 (447)
Q Consensus 109 ~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 184 (447)
..++...... . .++++|++.++.|++... ......|.... .++.+. .+
T Consensus 91 ~~~~~~~~~~----~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~------------~~~~~~~~~----------- 142 (397)
T TIGR01976 91 FLLSRAISRR----W-GPGDEVIVTRLDHEANISPWLQAAERAGAKVK------------WARVDEATG----------- 142 (397)
T ss_pred HHHHHHHHhc----C-CCCCEEEEcCCchHhHHHHHHHHHHhcCCEEE------------EEeccccCC-----------
Confidence 8777654211 1 234678887777655421 11111222111 111110 00
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCC
Q 013204 185 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI 264 (447)
Q Consensus 185 ~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~ 264 (447)
..+.+++++.+. +++.+|+++.+++..|.+.+ +++|.++|++||+++|+||+|. .|.. .. .....
T Consensus 143 --~~~~~~l~~~i~----~~~~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~~--~~--~~~~~ 207 (397)
T TIGR01976 143 --ELHPDDLASLLS----PRTRLVAVTAASNTLGSIVD----LAAITELVHAAGALVVVDAVHY-APHG--LI--DVQAT 207 (397)
T ss_pred --CcCHHHHHHhcC----CCceEEEEeCCCCCCCccCC----HHHHHHHHHHcCCEEEEehhhh-cccc--CC--CHHHc
Confidence 011366776664 34667888888778887776 9999999999999999999986 3211 11 22223
Q ss_pred CCCeee--ecccCCCcccceeEEEeChhHHHHhhhccCC--CCccCc-CCCCCCcHHHHHHHHHHHHHHhhhc-------
Q 013204 265 KPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNT--LGSFSH-GFTYSGHPVSCAVAIEALKIYKERN------- 332 (447)
Q Consensus 265 ~~d~v~--~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~-~~t~~~~~~~~~aa~a~l~~~~~~~------- 332 (447)
.+|+++ ++|.++ +++|++++++++++.+...... ...... ....+.+...+++..++++.+.+.+
T Consensus 208 ~~d~~~~s~~K~~g---~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~ 284 (397)
T TIGR01976 208 GADFLTCSAYKFFG---PHMGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSR 284 (397)
T ss_pred CCCEEEEechhhcC---CceEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccch
Confidence 468775 568773 5789999999988776532110 000000 0011234445555556666554321
Q ss_pred ----------HHHHHHHHHHHHHHhHhhccCCCceee--EeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCc
Q 013204 333 ----------IVEQVNKIAPKFQDGVKAFSDSPIIGE--IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM 400 (447)
Q Consensus 333 ----------~~~~~~~~~~~l~~~L~~l~~~~~~~~--~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 400 (447)
..++..++.+++++.|+++....+... ....+.++.+.+... ....+.++|.++||
T Consensus 285 ~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~L~~~gI 352 (397)
T TIGR01976 285 RERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGL------------PPQRVVRRLADQGI 352 (397)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCc------------CHHHHHHHHHHCCe
Confidence 234445566666666665522222211 111334444444321 13458889999999
Q ss_pred eEEee----------------CCEEEEecCCCCCHHHHHHHHHHH
Q 013204 401 LVRVS----------------GDNIMMSPPFIMSPEEVDELISKY 429 (447)
Q Consensus 401 ~~~~~----------------g~~iR~~~~~~~t~e~i~~~~~~l 429 (447)
+++.+ ++.+|++++..+|++||+++++.|
T Consensus 353 ~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 353 DAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred EEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 99854 246999999999999999999864
No 205
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.84 E-value=1.6e-18 Score=166.01 Aligned_cols=303 Identities=16% Similarity=0.172 Sum_probs=187.8
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 111 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~A 111 (447)
+.+.++|..+. ++++. | ..++..+.+.. .+.....++.+.+++++. ..++++++++|+++++..+
T Consensus 16 ~~~~~~~~~~~--~~~~~--~-~~~~~~~~~~~---------y~~~~~~~lr~~la~~~~-~~~~~i~~t~G~~~~i~~~ 80 (330)
T TIGR01140 16 PEDWLDFSTGI--NPLGP--P-VPPIPASAWAR---------YPDPEYDELRAAAAAYYG-LPAASVLPVNGAQEAIYLL 80 (330)
T ss_pred hhheeEccccC--CCCCC--C-hhhcchHHHhh---------CCCccHHHHHHHHHHHhC-CChhhEEECCCHHHHHHHH
Confidence 34678988776 44443 3 22221111111 122235788889988873 4567999999999998886
Q ss_pred HHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHH
Q 013204 112 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191 (447)
Q Consensus 112 l~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (447)
.+++ .++ +|++.+|+|+........ .|.. .+.++ +++
T Consensus 81 ~~~l---------~~g-~vl~~~p~y~~~~~~~~~-~g~~--------------~~~~~------------------d~~ 117 (330)
T TIGR01140 81 PRLL---------APG-RVLVLAPTYSEYARAWRA-AGHE--------------VVELP------------------DLD 117 (330)
T ss_pred HHHh---------CCC-eEEEeCCCcHHHHHHHHH-cCCE--------------EEEeC------------------CHH
Confidence 5543 223 688889999887543322 1111 11111 136
Q ss_pred HHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee--
Q 013204 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV-- 269 (447)
Q Consensus 192 ~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v-- 269 (447)
++++.+. +..+++++.|.|++| ..++.+.+++|+++|++||+++|+||+|.++...... ....+..++++
T Consensus 118 ~l~~~~~----~~~~v~i~~p~NPtG--~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~--~~~~~~~~~~i~~ 189 (330)
T TIGR01140 118 RLPAALE----ELDVLVLCNPNNPTG--RLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASL--APQAARFPGLVVL 189 (330)
T ss_pred HHHhhcc----cCCEEEEeCCCCCCC--CCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccch--hhHhccCCCEEEE
Confidence 6666653 223566777766555 4568899999999999999999999999877432111 11111123333
Q ss_pred -eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHHHHh
Q 013204 270 -SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDG 347 (447)
Q Consensus 270 -~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l~~~ 347 (447)
++||.++.+++|+|++++++++++.+... . ..+..+++++.++.+.++.-. ..+..++++++.+.+++.
T Consensus 190 ~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~-------~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 260 (330)
T TIGR01140 190 RSLTKFFGLAGLRLGFVVAHPALLARLREA-------L--GPWTVNGPARAAGRAALADTAWQAATRARLAAERARLAAL 260 (330)
T ss_pred EecchhhcCchhhhhheeCCHHHHHHHHhc-------C--CCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Confidence 68999984448999999999998888632 1 245556777777766665211 122345556666666666
Q ss_pred HhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-------CEEEEecCCCCCHH
Q 013204 348 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNIMMSPPFIMSPE 420 (447)
Q Consensus 348 L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-------~~iR~~~~~~~t~e 420 (447)
|+++ +.+....+.|.+..+.+.. ...+.++|+++||.+.++. +.+|++ +....+
T Consensus 261 L~~~---~~~~~~~~~~~f~~~~~~~--------------~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~--~~~~~~ 321 (330)
T TIGR01140 261 LARL---GGLEVVGGTALFLLVRTPD--------------AAALHEALARRGILIRDFDNFPGLDPRYLRFA--LPTDEE 321 (330)
T ss_pred HHhC---CCceECCCCCeEEEEEcCC--------------HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEE--ecCHHH
Confidence 6654 3222234456666666542 2358899999999999752 469999 444445
Q ss_pred HHHHHHHHH
Q 013204 421 EVDELISKY 429 (447)
Q Consensus 421 ~i~~~~~~l 429 (447)
+ +.++.+|
T Consensus 322 ~-~~~~~~l 329 (330)
T TIGR01140 322 N-DRLEEAL 329 (330)
T ss_pred H-HHHHHhh
Confidence 5 7777665
No 206
>PLN02231 alanine transaminase
Probab=99.84 E-value=3.4e-18 Score=172.08 Aligned_cols=345 Identities=13% Similarity=0.106 Sum_probs=202.6
Q ss_pred CHHHHHHHHHHHhcCC----cccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCC
Q 013204 51 EPRLVAAATAQLNTLP----FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRP 125 (447)
Q Consensus 51 ~p~v~~a~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~ 125 (447)
+.++++++.+.+.... ..|+...+..+....+++.+.+... +..+++|++++|+++|+..+++++.. .
T Consensus 142 p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~-------~ 214 (534)
T PLN02231 142 SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-------S 214 (534)
T ss_pred CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhcc-------C
Confidence 4566766666665421 1122223344444445555444322 24678999999999999999997631 2
Q ss_pred CcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCC---
Q 013204 126 NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP--- 202 (447)
Q Consensus 126 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~--- 202 (447)
.++.|++..|.|.++.......++.... ++.... +.+. .++++|++.+....+
T Consensus 215 ~gd~Vli~~P~Y~~y~~~~~~~g~~~v~-------------~~l~~~----------~~~~-~d~~~Le~~l~~~~~~~~ 270 (534)
T PLN02231 215 EKDGILCPIPQYPLYSASIALHGGTLVP-------------YYLDEA----------TGWG-LEISELKKQLEDARSKGI 270 (534)
T ss_pred CCCEEEEeCCCChhHHHHHHHcCCEEEE-------------EecCcc----------cCCC-CCHHHHHHHHHHHhhcCC
Confidence 3578999999999886554443332111 111000 0000 013777777754221
Q ss_pred CcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcc-cccc-cccc----CCC---CCCee---e
Q 013204 203 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL-GTMF-GCDK----YSI---KPDLV---S 270 (447)
Q Consensus 203 ~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~-g~~~-~~~~----~~~---~~d~v---~ 270 (447)
+..++++++|.|++| .+.+.+.+++|.++|++||++||.||+|..+... +..+ .+.. .+. ...++ +
T Consensus 271 ~~k~ivl~nP~NPTG--~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S 348 (534)
T PLN02231 271 TVRALVVINPGNPTG--QVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQS 348 (534)
T ss_pred CeEEEEEeCCCCCCC--cCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEec
Confidence 223456777766665 5678999999999999999999999999987543 2222 1111 111 11244 5
Q ss_pred ecccCCC-cccceeEEEe---ChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHH-------HH----h-hhcHH
Q 013204 271 FAKALSS-AYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK-------IY----K-ERNIV 334 (447)
Q Consensus 271 ~sK~l~g-g~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~-------~~----~-~~~~~ 334 (447)
|||.+.| .++++|++++ ++++++.+... ...+.+.+.+++.++..+++ .. + .+++.
T Consensus 349 ~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~--------~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~ 420 (534)
T PLN02231 349 VSKGYYGECGKRGGYMEVTGFTSDVREQIYKV--------ASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGIL 420 (534)
T ss_pred cCcccccCCccceEEEEEecCCHHHHHHHHHH--------HhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHH
Confidence 7998743 3399999986 67888877532 11233445566666555552 11 1 12345
Q ss_pred HHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEE-EeecCCCCCCCCCC-CcchHHHHHHHHH-HcCceEEeeC-----
Q 013204 335 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGT-EFADNKSPNEPFPP-EWGIGAYFGAQCE-KHGMLVRVSG----- 406 (447)
Q Consensus 335 ~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~Gi~~~~~g----- 406 (447)
+.++++.+.+.+.|+++ +.+......|.|+.+ .+..+......... .......++..|+ +.||.+.|+.
T Consensus 421 ~~~~~r~~~l~~~L~~~---~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~ 497 (534)
T PLN02231 421 SSLARRAKTLEDALNSL---EGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQV 497 (534)
T ss_pred HHHHHHHHHHHHHHhcC---CCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCC
Confidence 66777777777777665 334445566666544 33211100000000 0000223455555 6799998762
Q ss_pred ---CEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 013204 407 ---DNIMMSPPFIMSPEEVDELISKYGKALKATEERVK 441 (447)
Q Consensus 407 ---~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~ 441 (447)
..+|++ +..++++|++++++|.+.++++.++++
T Consensus 498 ~g~~~~Rit--~~~~~e~l~eal~RL~~~~~~~~~~~~ 533 (534)
T PLN02231 498 PGTWHFRCT--ILPQEDKIPAIVSRLTEFHKSFMDEFR 533 (534)
T ss_pred CCCCeEEEE--eCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 249999 678999999999999999988877653
No 207
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.84 E-value=6.4e-18 Score=166.36 Aligned_cols=337 Identities=17% Similarity=0.178 Sum_probs=194.2
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcc-cc-c--Cc-CCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HS-F--WN-RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA 107 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~-~--~~-~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA 107 (447)
+.|||..+. +..++.+++++.+.+...... +. . +. ...+...++.+.+++++. .+.++++|++|++++
T Consensus 4 ~~yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g-~~~~~v~~~~g~t~a 76 (402)
T TIGR02006 4 PIYLDYAAT------TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIG-ADSREIVFTSGATES 76 (402)
T ss_pred cEEeeCCcC------CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEeCCHHHH
Confidence 478998654 346899999998887532111 10 0 00 012345566777888763 456789999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhc---ccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS---LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 184 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (447)
+..+++.+.... . .+++.|++.. ..|.+...... ..|.. +..++....+.
T Consensus 77 ~~~~l~~l~~~~---~-~~g~~Vi~~~-~~h~s~~~~~~~~~~~g~~------------v~~v~~~~~~~---------- 129 (402)
T TIGR02006 77 NNLAIKGIAHFY---K-SKGNHIITSK-TEHKAVLDTCRYLEREGFE------------VTYLPPKSNGL---------- 129 (402)
T ss_pred HHHHHHHHHHhh---c-CCCCEEEECC-CccHHHHHHHHHHHhcCCE------------EEEEccCCCCc----------
Confidence 999988664211 1 2235566554 44554332221 11211 11122211100
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCC
Q 013204 185 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI 264 (447)
Q Consensus 185 ~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~ 264 (447)
.+++++++.+. +++++|++..+++..|.+.+ +++|.++|++||+++++|++|+ +|.. + ++..+.
T Consensus 130 ---~d~~~l~~~l~----~~~~lv~v~~~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a-~g~~--~--~~~~~~ 193 (402)
T TIGR02006 130 ---IDLEELKAAIR----DDTILVSIMHVNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS-VGKI--P--INVNEL 193 (402)
T ss_pred ---CCHHHHHHhcC----CCCEEEEEECCCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-cCCc--c--cCcccc
Confidence 01366666654 24678888888888888877 9999999999999999999997 5433 1 223345
Q ss_pred CCCeeeec--ccCCCcccceeEEEeChhHHHHhhhc---cCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh--hcHHHHH
Q 013204 265 KPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQ---SNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQV 337 (447)
Q Consensus 265 ~~d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~--~~~~~~~ 337 (447)
.+|++++| |.+ |+ .++|+++.+++....+... ....+.+. ..+.+...+.+..++++.+.. +...++.
T Consensus 194 ~~D~~~~s~~K~~-gp-~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~---~gt~~~~~~~al~~al~~~~~~~~~~~~~~ 268 (402)
T TIGR02006 194 KVDLMSISGHKIY-GP-KGIGALYVRRKPRVRLEALIHGGGHERGMR---SGTLPTHQIVGMGEAFRIAKEEMAQDTAHV 268 (402)
T ss_pred CCCEEEEehhhhc-CC-CceEEEEEccCCCCCCCceecCCCccCCcc---CCCccHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 68999988 955 34 5789998887644332211 00000111 223455555555577776543 2344666
Q ss_pred HHHHHHHHHhHhhccCCCceeeEeee-eeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEe------------
Q 013204 338 NKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV------------ 404 (447)
Q Consensus 338 ~~~~~~l~~~L~~l~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~------------ 404 (447)
+++.+++++.|+++....+....... ...+.+.|.... ...+...+ +++.++.
T Consensus 269 ~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~------------~~~~~~~l--~~i~v~~G~~c~~~~~~~~ 334 (402)
T TIGR02006 269 LALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVE------------GESLIMAL--KDLAVSSGSACTSASLEPS 334 (402)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcC------------HHHHHHhc--CCEEEechhhcCCCCCCcc
Confidence 77777777777665321111111100 011123333111 11232222 2443321
Q ss_pred ------------eCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 405 ------------SGDNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 405 ------------~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
..+.+|+++...+|++|||++++.|+++++.++.
T Consensus 335 ~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~ 380 (402)
T TIGR02006 335 YVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRE 380 (402)
T ss_pred HHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1256999999999999999999999999887653
No 208
>PRK09265 aminotransferase AlaT; Validated
Probab=99.84 E-value=6.8e-18 Score=166.34 Aligned_cols=344 Identities=15% Similarity=0.163 Sum_probs=201.3
Q ss_pred CCCCEEEecCCccccccCCC-CCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcC-----cCCCCeEEEeCC
Q 013204 30 VNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTNS 103 (447)
Q Consensus 30 ~dg~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----~~~~~~v~~~~s 103 (447)
..|+..+||..|.- ++++. .+|++.+++.+.+..... ++. .....++.+.+++++. +..++++++++|
T Consensus 30 ~~~~~~i~l~~g~p-~~~~~~~~~~i~~~~~~~~~~~~~-Y~~----~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G 103 (404)
T PRK09265 30 EEGHKILKLNIGNP-APFGFEAPDEILRDVIRNLPTAQG-YSD----SKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNG 103 (404)
T ss_pred HcCCCeEEecCCCC-CcCCCCCCHHHHHHHHHHhhcCCC-CCC----CCCcHHHHHHHHHHHhccCCCCCCcccEEEeCC
Confidence 36778999987633 34454 567888888877654322 221 1122345555555541 346789999999
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChh
Q 013204 104 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 183 (447)
Q Consensus 104 GseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (447)
+++++..+++... .+++.|++.+++|..+.......+..... +++....
T Consensus 104 ~~~~l~~~~~~~~--------~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~-------------~~~~~~~---------- 152 (404)
T PRK09265 104 VSELIVMAMQALL--------NNGDEVLVPAPDYPLWTAAVSLSGGKPVH-------------YLCDEEA---------- 152 (404)
T ss_pred hHHHHHHHHHHhC--------CCCCEEEEeCCCCcChHHHHHHcCCEEEE-------------Eeccccc----------
Confidence 9999999888653 33578999999998765444332221110 1110000
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCC
Q 013204 184 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS 263 (447)
Q Consensus 184 ~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~ 263 (447)
.+ ..+.+++++.+. ++...++++.|.|++| ...+.+.+++|.++|++||+++|+||+|.++...+.... ....
T Consensus 153 ~~-~~d~~~l~~~~~---~~~~~v~l~~P~NPtG--~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~ 225 (404)
T PRK09265 153 GW-FPDLDDIRSKIT---PRTKAIVIINPNNPTG--AVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHI-SIAS 225 (404)
T ss_pred CC-CCCHHHHHHhcc---ccceEEEEECCCCCCC--cCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcC-CHHH
Confidence 00 011366666553 2333456666655554 455778999999999999999999999987744332110 1011
Q ss_pred CCCC--ee---eecccCCCcccceeEEEe--ChhH----HHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh-h
Q 013204 264 IKPD--LV---SFAKALSSAYMPIGAILV--SPEV----SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-R 331 (447)
Q Consensus 264 ~~~d--~v---~~sK~l~gg~~~~g~~~~--~~~~----~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~ 331 (447)
..++ ++ +|||.++.+++++|+++. ++++ ++.+.. ....+++.+.+++.++.++|...+. .
T Consensus 226 ~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~~~~~~~ 297 (404)
T PRK09265 226 LAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDM--------LASMRLCANVPAQHAIQTALGGYQSIN 297 (404)
T ss_pred cCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHH--------HhccccCCCcHHHHHHHHHhcCchhHH
Confidence 1122 22 479999664599999995 3433 333321 1112345566777777776642111 1
Q ss_pred cHH---HHHHHHHHHHHHhHhhccCCCceeeEeee-eeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee--
Q 013204 332 NIV---EQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-- 405 (447)
Q Consensus 332 ~~~---~~~~~~~~~l~~~L~~l~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-- 405 (447)
++. ..+.++.+.+.+.|+++. .+...... |.++.+.+....... . .....+.+.+.++||.+.++
T Consensus 298 ~~~~~~~~~~~~r~~~~~~L~~~~---~~~~~~p~~g~~l~~~~~~~~~~~---~---~~~~~~~~~l~~~gv~v~pg~~ 368 (404)
T PRK09265 298 ELILPGGRLYEQRDRAWELLNAIP---GVSCVKPKGALYAFPKLDPKVYPI---H---DDEQFVLDLLLQEKVLLVQGTG 368 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC---CCcccCCCcceEEEEEecccccCC---C---CHHHHHHHHHHhCCEEEECchh
Confidence 111 234444555556665542 22223333 556666665421000 0 01334667788999999865
Q ss_pred -----CCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 406 -----GDNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 406 -----g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
.+.+|++ +..+++++++++++|.++++..
T Consensus 369 F~~~~~~~~Ri~--~~~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 369 FNWPEPDHFRIV--TLPRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred hCCCCCCeEEEE--eCCCHHHHHHHHHHHHHHHHHh
Confidence 1469999 5678999999999999988653
No 209
>PLN02672 methionine S-methyltransferase
Probab=99.84 E-value=7.1e-18 Score=177.62 Aligned_cols=352 Identities=11% Similarity=0.050 Sum_probs=211.5
Q ss_pred EEEeCCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc-C-CCCeEEEeCC
Q 013204 26 YVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-S-KMAKVFFTNS 103 (447)
Q Consensus 26 ~~~d~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~-~~~~v~~~~s 103 (447)
++.+.+|..++++..+- +.++ .+|.+++++.+.+.+... ..+..+....+++++.+.+.- . ..+++++++|
T Consensus 690 ~~~~~~g~~vI~LsinE--~d~p-pPp~V~eAi~eal~~~~~----s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~G 762 (1082)
T PLN02672 690 SVSGSQESSLIHMDVDE--SFLP-VPSAVKASIFESFVRQNI----SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDT 762 (1082)
T ss_pred CCcccCCCCEEEEeCCC--CCCC-CCHHHHHHHHHHHhhcCC----CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCC
Confidence 34555678899987664 5566 688999999987755322 122445677888888887532 1 2248999998
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCC--cccCCCCCCC
Q 013204 104 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGET 181 (447)
Q Consensus 104 GseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 181 (447)
..+++..+++... .+++.|++.+|+|..+...+...+.... .++... .|.
T Consensus 763 s~elL~lll~aLl--------~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv-------------~Vpl~~e~gf~------- 814 (1082)
T PLN02672 763 SLALFNKLVLCCV--------QEGGTLCFPAGSNGTYVSAAKFLKANFR-------------RIPTKSSDGFK------- 814 (1082)
T ss_pred HHHHHHHHHHHHc--------CCCCEEEEeCCChHHHHHHHHHcCCEEE-------------EEecccccCCC-------
Confidence 8888888887663 3358899999999888655554332211 111100 000
Q ss_pred hhHHHHHHHHHHHHHHHhhCCCcEEEEEEccc-cCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc---
Q 013204 182 EEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF--- 257 (447)
Q Consensus 182 ~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv-~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~--- 257 (447)
.+++.+++.+... ....++++.|. |++| .+++.+.+++|.++|++||+++|.||+|.++-..+...
T Consensus 815 ------lD~d~Le~al~~~--~~~~I~L~nPnhNPTG--~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~ 884 (1082)
T PLN02672 815 ------LTAKTLASTLETV--KKPWVYISGPTINPTG--LLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGW 884 (1082)
T ss_pred ------CCHHHHHHHhccC--CCCEEEEECcCCCCcC--ccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCccc
Confidence 0136677766421 22467888887 6655 56789999999999999999999999999775554321
Q ss_pred ccc----cC-CCCC--Cee---eecccCCCcccceeEEEeCh-hHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHH
Q 013204 258 GCD----KY-SIKP--DLV---SFAKALSSAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK 326 (447)
Q Consensus 258 ~~~----~~-~~~~--d~v---~~sK~l~gg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~ 326 (447)
.+. .+ ...+ .++ +|||.++.+++++|++++++ ++++.+.... . ....+..+..++.++++++.
T Consensus 885 sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~----~--~s~~~~~~q~Aaaaalall~ 958 (1082)
T PLN02672 885 DLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAP----G--LSRPHSTLKYTIKKLLGLKN 958 (1082)
T ss_pred chhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhh----h--hcCCCcHHHHHHHHHHHHHh
Confidence 010 11 1112 222 57998877669999999865 4888876310 0 01111223334443433331
Q ss_pred H-----Hh-hhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEE-EEEeecCC--CCCCCCCC----CcchHHHHHH
Q 013204 327 I-----YK-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLIL-GTEFADNK--SPNEPFPP----EWGIGAYFGA 393 (447)
Q Consensus 327 ~-----~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~-~i~~~~~~--~~~~~~~~----~~~~~~~~~~ 393 (447)
. .. -.+..+.++++.+++.+.|++. ++ ....+.|.++ ++.+..-. ..+..... .......+.+
T Consensus 959 ~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~---Gi-~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae 1034 (1082)
T PLN02672 959 QKSSDLLDGVAEQKKILKSRAERLKETLEAC---GW-DVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIRE 1034 (1082)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC---CC-eEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHH
Confidence 0 00 1123344666666666666654 22 2345555554 33332100 00000000 0001456888
Q ss_pred HHHHc-CceEEeeC-----CEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 394 QCEKH-GMLVRVSG-----DNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 394 ~l~~~-Gi~~~~~g-----~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
.|+++ ||.+.++. +.+||+ +..+++++++++++|++.++
T Consensus 1035 ~LLee~GVaV~PGs~FG~~g~~RIs--fa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1035 AILKSTGLCINSSSWTGIPGYCRFS--FALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred HHHHcCCEEEecCcccCCCCeEEEE--ecCCHHHHHHHHHHHHHHHH
Confidence 88865 99998752 569999 66799999999999998654
No 210
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.84 E-value=5.4e-18 Score=167.10 Aligned_cols=342 Identities=16% Similarity=0.118 Sum_probs=196.5
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccc-cC-c--CC-ChHHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS-FW-N--RT-TKPSLDLAKELLEMFTASKMAKVFFTNSGS 105 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~-~--~~-~~~~~~l~~~l~~~~~~~~~~~v~~~~sGs 105 (447)
++..|||..+ +|..++.+.+++.+.+........ .. . .. .....++ +.+ +++ +.++++++|++|+|
T Consensus 26 ~~~iyld~~a------~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~-g~~~~~v~~~~~~t 96 (406)
T TIGR01814 26 NAVIYLDGNS------LGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESL-LKL-RLV-GAKEDEVVVMNTLT 96 (406)
T ss_pred CCcEEecCCC------cCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhh-ccc-ccc-CCCCCcEEEeCCch
Confidence 3457777532 344578888998877654221110 00 0 01 1122222 334 554 34678999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhh----cccCCccccCCCCCCCCcceecCCCCcccCCCCCCC
Q 013204 106 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA----SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 181 (447)
Q Consensus 106 eA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (447)
+++..+++.+.. .+ .++..|+ .+..-|.+....+ ...|.... .....++....+
T Consensus 97 ~~l~~~~~~~~~----~~-~~~~~i~-~~~~~~~s~~~~~~~~~~~~g~~~~--------~~~~~~~~~~~g-------- 154 (406)
T TIGR01814 97 INLHLLLASFYK----PT-PKRYKIL-LEAKAFPSDHYAIESQLQLHGLTVE--------ESMVQIEPREEE-------- 154 (406)
T ss_pred HHHHHHHHHhcC----Cc-CCccEEE-ecCCCCChHHHHHHHHHHhcCCCcc--------cceEEeccCCCC--------
Confidence 999999886521 01 1123444 4544444422221 11111100 000011110000
Q ss_pred hhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccccccc
Q 013204 182 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK 261 (447)
Q Consensus 182 ~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~ 261 (447)
..+++++++.+.... +++++|+++.+++..|.+.| +++|.++|++||+++++|++|+ +|.. ++....
T Consensus 155 -----~~~~~~l~~~~~~~~-~~t~lv~~~~v~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~-~G~~--~id~~~ 221 (406)
T TIGR01814 155 -----TLRLEDILDTIEKNG-DDIAVILLSGVQYYTGQLFD----MAAITRAAHAKGALVGFDLAHA-VGNV--PLDLHD 221 (406)
T ss_pred -----ccCHHHHHHHHHhcC-CCeEEEEEeccccccceecC----HHHHHHHHHHcCCEEEEEcccc-cCCc--cccccc
Confidence 001366666665432 46889999999999999988 9999999999999999999998 5543 222332
Q ss_pred CCCCCCeeeec--ccCCCcccceeEEEeChhHHHHhhhccCC--CC----ccCcC----------CCCCCcHHHHHHHHH
Q 013204 262 YSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNT--LG----SFSHG----------FTYSGHPVSCAVAIE 323 (447)
Q Consensus 262 ~~~~~d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~~--~~----~~~~~----------~t~~~~~~~~~aa~a 323 (447)
..+|++++| |.|.|| .+ |+++..++....+...... .. .+... ...+++..++++..+
T Consensus 222 --~gvD~~~~s~hK~l~g~-pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~ 297 (406)
T TIGR01814 222 --WGVDFACWCTYKYLNAG-PG-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRG 297 (406)
T ss_pred --CCCCEEEEcCccccCCC-CC-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHH
Confidence 346877665 888776 35 5555544333222211000 00 00000 012345667777777
Q ss_pred HHHHHhh---hcHHHHHHHHHHHHHHhHhhccC----CCceee--EeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHH
Q 013204 324 ALKIYKE---RNIVEQVNKIAPKFQDGVKAFSD----SPIIGE--IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ 394 (447)
Q Consensus 324 ~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~----~~~~~~--~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (447)
+++.+.+ +...++.+.+.+++++.|+++.. ..+... ....+.++.+.+. .. ...+.+.
T Consensus 298 al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~------------~~~~~~~ 364 (406)
T TIGR01814 298 SLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VP------------GKAVFQA 364 (406)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CC------------HHHHHHH
Confidence 8887754 34567777788888888766421 111211 1112445555544 11 3457888
Q ss_pred HHHcCceEEeeC-CEEEEec-CCCCCHHHHHHHHHHHHHHH
Q 013204 395 CEKHGMLVRVSG-DNIMMSP-PFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 395 l~~~Gi~~~~~g-~~iR~~~-~~~~t~e~i~~~~~~l~~~l 433 (447)
|.++||++...+ +.||++| ++.+|++||++++++|++.+
T Consensus 365 L~~~gi~v~~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 365 LIKRGVIGDKREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred HHHCCEEEeccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 999999987654 5799999 68999999999999998764
No 211
>PRK08354 putative aminotransferase; Provisional
Probab=99.83 E-value=7.7e-18 Score=159.91 Aligned_cols=297 Identities=17% Similarity=0.168 Sum_probs=183.6
Q ss_pred CCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHH
Q 013204 30 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 109 (447)
Q Consensus 30 ~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~ 109 (447)
.+...++||+.+. ++++ +|.+.+++.+.......+ + ....+.+++++.+. +++++++|+++|+.
T Consensus 5 ~~~~~~i~l~~~~--np~~--p~~~~~a~~~~~~~~~~y------p--~~~~l~~~ia~~~~----~~I~vt~G~~~al~ 68 (311)
T PRK08354 5 IREEGLIDFSASV--NPYP--PEWLDEMFERAKEISGRY------T--YYEWLEEEFSKLFG----EPIVITAGITEALY 68 (311)
T ss_pred CCccceeEecCCC--CCCC--CHHHHHHHHHHHHHhhcC------C--ChHHHHHHHHHHHC----CCEEECCCHHHHHH
Confidence 3455789998764 5654 688999988776542211 2 24567888888862 36999999999998
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 189 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (447)
.++.++ .+++.|++.+|+|.++...+...+..... .+. +
T Consensus 69 ~~~~~~---------~~gd~vlv~~P~y~~~~~~~~~~g~~~~~-------------~~~-------------------d 107 (311)
T PRK08354 69 LIGILA---------LRDRKVIIPRHTYGEYERVARFFAARIIK-------------GPN-------------------D 107 (311)
T ss_pred HHHHhh---------CCCCeEEEeCCCcHHHHHHHHHcCCEEee-------------cCC-------------------C
Confidence 776543 23478999999998886555443322110 000 0
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV 269 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v 269 (447)
.+.+++.+. +...++++.|.|++| ...+.+.+++|.++|++||+++|.||+|.+|...+.. .. .+.++
T Consensus 108 ~~~l~~~~~----~~~~vi~~~P~NPTG--~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~--~~----~~~vi 175 (311)
T PRK08354 108 PEKLEELVE----RNSVVFFCNPNNPDG--KFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPES--PE----GENII 175 (311)
T ss_pred HHHHHHhhc----CCCEEEEecCCCCCC--CccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccc--cC----CCcEE
Confidence 256666554 233577888876665 5668899999999999999999999999987443211 11 22233
Q ss_pred ---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHH
Q 013204 270 ---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQD 346 (447)
Q Consensus 270 ---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~ 346 (447)
+|||.++-+++|+|++++ +.+.+... . ..+..+.++.+++.+.++ +. .+.+++..+.+++
T Consensus 176 ~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~-------~--~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~ 238 (311)
T PRK08354 176 KLRTFTKSYGLPGIRVGYVKG---FEEAFRSV-------R--MPWSIGSTGYAFLEFLIE----DD-FEHLRKTMPLIWR 238 (311)
T ss_pred EEeccHhhcCCccceeeeeee---hHHHHHHc-------C--CCccCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHH
Confidence 589998843399999998 44444421 1 133344455544444333 11 1233333333333
Q ss_pred hHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-----CEEEEecCCCCCHHH
Q 013204 347 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSPEE 421 (447)
Q Consensus 347 ~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-----~~iR~~~~~~~t~e~ 421 (447)
..+.+...- ...+.|.++.+.+.+ ...+.+.|+++||.+.++. +.+||+ ..+.++
T Consensus 239 ~~~~l~~~l---~~~~~~~~~~~~~~~--------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~---~~~~~~ 298 (311)
T PRK08354 239 EKERFEKAL---YVKSDANFFIKDVGD--------------AEKFVEFLKRNGILVRDCTSFGLPGYIRFS---VRDREE 298 (311)
T ss_pred HHHHHHHhc---CCCCCCcEEEEECCC--------------HHHHHHHHHHCCeEEEecccCCCCCeEEEE---eCCHHH
Confidence 333331111 123455555554321 2357888999999999863 579999 456677
Q ss_pred HHHHHHHHHHH
Q 013204 422 VDELISKYGKA 432 (447)
Q Consensus 422 i~~~~~~l~~~ 432 (447)
.+++++.|++.
T Consensus 299 ~~~l~~al~~~ 309 (311)
T PRK08354 299 NEKLIRALREW 309 (311)
T ss_pred HHHHHHHHHHh
Confidence 78888877764
No 212
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.83 E-value=1.4e-17 Score=164.05 Aligned_cols=346 Identities=13% Similarity=0.093 Sum_probs=199.8
Q ss_pred CCCEEEecCCccccc-cCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCc-----CCCCeEEEeCCh
Q 013204 31 NGKKYLDSLAGLWCT-ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-----SKMAKVFFTNSG 104 (447)
Q Consensus 31 dg~~~lD~~~~~~~~-~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-----~~~~~v~~~~sG 104 (447)
.|..++|+..+.... +.=..++.+.+++.+.+...... . ..+.....++.+.+++++.. ...+++++++|+
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~-~--Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~ 105 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFN-G--YAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGC 105 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCC-C--CCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCh
Confidence 467899997774321 11124688999988877542211 0 11223344555555555431 245789999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhH
Q 013204 105 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 184 (447)
Q Consensus 105 seA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (447)
++|+..+++... ..+++|++.++.|..+...+.... ... ..++.+.. . .
T Consensus 106 t~al~~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~g-~~~------------~~~~~~~~-------~---~ 154 (403)
T TIGR01265 106 SQAIEICIEALA--------NPGANILVPRPGFPLYDTRAAFSG-LEV------------RLYDLLPE-------K---D 154 (403)
T ss_pred HHHHHHHHHHhC--------CCCCEEEEeCCCchhHHHHHHHcC-CEE------------EEecCCcc-------c---C
Confidence 999999999763 234679999999866543332211 111 11111000 0 0
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-ccccCC
Q 013204 185 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYS 263 (447)
Q Consensus 185 ~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~~~~~~ 263 (447)
+ ..+++++++.+. ++...++++.|.|++| ...+.+.+++|.++|+++|+++|+||+|..|...+..+ ....+.
T Consensus 155 ~-~~d~~~l~~~~~---~~~~~v~i~~p~NPtG--~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 228 (403)
T TIGR01265 155 W-EIDLDGLEALAD---EKTVAIVVINPSNPCG--SVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFA 228 (403)
T ss_pred C-ccCHHHHHHHhC---cCccEEEEecCCCCCC--CCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhc
Confidence 0 011366666553 3344556666655554 45677889999999999999999999999885544322 111111
Q ss_pred CCCCee---eecccCCCcccceeEEEeC-h-h-----HHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh---h
Q 013204 264 IKPDLV---SFAKALSSAYMPIGAILVS-P-E-----VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK---E 330 (447)
Q Consensus 264 ~~~d~v---~~sK~l~gg~~~~g~~~~~-~-~-----~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~---~ 330 (447)
-...++ +|||.++.+++++|++++. + + +++.+.. +. ..++..+.+++.++.++++... -
T Consensus 229 ~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~q~~~~~~l~~~~~~~~ 300 (403)
T TIGR01265 229 SIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKN-------LL-QRILGPATIVQGALPDILENTPQEFF 300 (403)
T ss_pred cCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHH-------Hh-hhhcCCChHHHHHHHHHHHhChHHHH
Confidence 112233 5899876655999999974 2 2 3333321 11 1134456777777776665311 1
Q ss_pred hcHHHHHHHHHHHHHHhHhhccCCCceeeE-eeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHH-HHcCceEEeeC--
Q 013204 331 RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVSG-- 406 (447)
Q Consensus 331 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~g-- 406 (447)
.+..+.++++.+.+.+.|+.+ +.+..+ +..|.++.+.+....... ......+...+ .++||.+.++.
T Consensus 301 ~~~~~~~~~~~~~l~~~L~~~---~~~~~~~p~~g~f~~~~~~~~~~~~------~~~~~~~~~~l~~~~gv~v~pg~~f 371 (403)
T TIGR01265 301 DGKISVLKSNAELCYEELKDI---PGLVCPKPEGAMYLMVKLELELFPE------IKDDVDFCEKLVREESVICLPGSAF 371 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhcC---CCceecCCCceeEEEEeccccccCC------CCCHHHHHHHHHHhCCEEEeCcccc
Confidence 223344455555555555543 222222 334667777765421100 00133466664 57899998753
Q ss_pred ---CEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 407 ---DNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 407 ---~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
+.+|++ +..+++++++++++|.+.+++
T Consensus 372 ~~~~~iRis--~~~~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 372 GLPNWVRIT--ITVPESMLEEACSRIKEFCER 401 (403)
T ss_pred CCCCeEEEE--ecCCHHHHHHHHHHHHHHHHh
Confidence 579999 556789999999999888754
No 213
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=8.4e-19 Score=169.32 Aligned_cols=285 Identities=14% Similarity=0.158 Sum_probs=178.4
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
+.....++.+.+++.+ +.++++|++++|+++++..+++... +++++.|++.+|+|..+...+... |...
T Consensus 55 p~~~~~~l~~~~a~~~-g~~~~~I~~~~Gs~e~i~~~~~~~~-------~~g~~~vli~~P~y~~y~~~~~~~-G~~~-- 123 (351)
T PRK01688 55 PECQPKAVIENYAAYA-GVKPEQVLVSRGADEGIELLIRAFC-------EPGKDAILYCPPTYGMYSVSAETI-GVEI-- 123 (351)
T ss_pred CCCChHHHHHHHHHHh-CCCHHHEEEcCCHHHHHHHHHHHhc-------CCCCCEEEEcCCCHHHHHHHHHHc-CCEE--
Confidence 4444578888888886 4577899999999999999988653 133478999999997665433322 2111
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
..++....+. .+++++++.+. +...+++++|.|++| ...+.+.+++|.+.|
T Consensus 124 ----------~~v~~~~~~~-------------~d~~~l~~~~~----~~~lv~l~nPnNPTG--~~~~~~~l~~l~~~~ 174 (351)
T PRK01688 124 ----------RTVPTLDNWQ-------------LDLPAIADNLD----GVKVVYVCSPNNPTG--NLINPQDLRTLLELT 174 (351)
T ss_pred ----------EEeecCCCCC-------------CCHHHHHHhcc----CCcEEEEeCCCCCCC--CCCCHHHHHHHHHhC
Confidence 1111111111 01255555441 333456666666665 455778889999988
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCC
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 311 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 311 (447)
++ ++++|+||+|..|... ..........+.++ +|||.++-+++|+|++++++++++.+... . ..+
T Consensus 175 ~~-~~~vivDEay~~f~~~--~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~-------~--~~~ 242 (351)
T PRK01688 175 RG-KAIVVADEAYIEFCPQ--ASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKV-------I--APY 242 (351)
T ss_pred CC-CcEEEEECchhhcCCC--CChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhc-------c--CCC
Confidence 86 6889999999877421 11111112224544 68998874448999999999999888632 1 234
Q ss_pred CCcHHHHHHHHHHHHHH--h-hhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchH
Q 013204 312 SGHPVSCAVAIEALKIY--K-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIG 388 (447)
Q Consensus 312 ~~~~~~~~aa~a~l~~~--~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~ 388 (447)
..+.+++.++.++|+.. + -.+..+.+.+.++++.+.|+++.... ...+..+.++.+.+.+ .
T Consensus 243 ~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~--~~~ps~~nfi~~~~~~--------------~ 306 (351)
T PRK01688 243 PLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVE--QVFDSETNYILARFTA--------------S 306 (351)
T ss_pred CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCC--eECCCCCcEEEEEcCC--------------H
Confidence 45556666666666521 1 12223444555566666666552211 1223446666665531 3
Q ss_pred HHHHHHHHHcCceEEeeC------CEEEEecCCCCCHHHHHHHHHHHH
Q 013204 389 AYFGAQCEKHGMLVRVSG------DNIMMSPPFIMSPEEVDELISKYG 430 (447)
Q Consensus 389 ~~~~~~l~~~Gi~~~~~g------~~iR~~~~~~~t~e~i~~~~~~l~ 430 (447)
..+.+.|+++||.++.++ +.+|++ ..+++++++++++|+
T Consensus 307 ~~l~~~L~~~gi~vr~~~~~~~~~~~iRis---~~~~~e~~~l~~al~ 351 (351)
T PRK01688 307 SAVFKSLWDQGIILRDQNKQPGLSNCLRIT---IGTREECQRVIDALR 351 (351)
T ss_pred HHHHHHHHHCCeEEEECCCcCCCCCeEEEe---CCCHHHHHHHHHhhC
Confidence 458889999999998652 569999 448899999998873
No 214
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.83 E-value=2.9e-18 Score=168.52 Aligned_cols=341 Identities=11% Similarity=0.046 Sum_probs=189.3
Q ss_pred EEEecCCccccccCCCCC--HHHHHHHHHHHhcCCc-ccccCcCCChHHHHHHHHHHHhcCc-CCCCeE--EEeCChhhH
Q 013204 34 KYLDSLAGLWCTALGGSE--PRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTA-SKMAKV--FFTNSGSEA 107 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~--p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~v--~~~~sGseA 107 (447)
..+||..|....+-++.+ +.+.+++.+.+..... .|+...+..+....+++++.+.... ...+++ ++|+|+++|
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~a 106 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGA 106 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHH
Confidence 568988775322222223 6777787776643211 1222233333344444443322111 146666 999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
+..++++.... ..++.|++.+|+|.++.......+.... .+++.+. +.+ .
T Consensus 107 l~~~~~~l~~~------~pGd~Vlv~~P~y~~~~~~~~~~g~~~v-------------~v~~~~~----------~~~-~ 156 (396)
T PRK09257 107 LRVGADFLKRA------FPDAKVWVSDPTWPNHRAIFEAAGLEVK-------------TYPYYDA----------ATK-G 156 (396)
T ss_pred HHHHHHHHHHh------CCCCeEEECCCCcccHHHHHHHcCCcEE-------------EEecccc----------ccC-c
Confidence 99998755311 2347899999999988655554333221 1111000 000 0
Q ss_pred HHHHHHHHHHHhhCCCcEEEEE-EccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcc-cc-cccc-ccCC
Q 013204 188 RLANNLEDLILKEGPETIAAFI-AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL-GT-MFGC-DKYS 263 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi-~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~-g~-~~~~-~~~~ 263 (447)
.+++++++.+....+.+ .+++ ..|.|++| ...+.+.+++|.++|++||+++|.||+|.++... +. .... ...+
T Consensus 157 ~d~~~l~~~~~~~~~~~-~~~i~~~p~NPTG--~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~ 233 (396)
T PRK09257 157 LDFDAMLADLSQAPAGD-VVLLHGCCHNPTG--ADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAA 233 (396)
T ss_pred cCHHHHHHHHHhCCCCC-EEEEeCCCCCCCC--CCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHh
Confidence 12477777766433323 3444 44455555 5668999999999999999999999999987532 11 1111 1111
Q ss_pred CCCCee---eecccCCCcccceeEEEe---ChhH----HHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHH-----
Q 013204 264 IKPDLV---SFAKALSSAYMPIGAILV---SPEV----SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY----- 328 (447)
Q Consensus 264 ~~~d~v---~~sK~l~gg~~~~g~~~~---~~~~----~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~----- 328 (447)
..+.++ +|||.++..++|+|++++ +++. +..+.. .........+++++.++.+.++.-
T Consensus 234 ~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 306 (396)
T PRK09257 234 AGLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKA-------TIRTNYSNPPAHGAAIVATILNDPELRAE 306 (396)
T ss_pred cCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHH-------HhhhhcCCCcHHHHHHHHHHhCCHHHHHH
Confidence 122333 689999862389999873 3443 333321 011122334566665555555311
Q ss_pred -h--hhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeee-eEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEe
Q 013204 329 -K--ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV 404 (447)
Q Consensus 329 -~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~ 404 (447)
. -++..+.++++.+.+.+.|+++..-.........| .++++.+.+ ..+.+.+.+.||.+.+
T Consensus 307 ~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~~---------------~~~~~l~~~~~V~~~p 371 (396)
T PRK09257 307 WEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLTP---------------EQVDRLREEFGVYAVG 371 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCCH---------------HHHHHHHHcCCEEEcC
Confidence 0 12244566666666666666651100122233444 444454421 2244555678998887
Q ss_pred eCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 405 SGDNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 405 ~g~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
.+ ||+.. ..++++|++++++|++++
T Consensus 372 ~~---ri~~~-~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 372 SG---RINVA-GLNESNIDYVAEAIAAVL 396 (396)
T ss_pred CC---eEEEe-eCCHHHHHHHHHHHHhhC
Confidence 54 88832 389999999999998753
No 215
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=6e-18 Score=164.82 Aligned_cols=323 Identities=14% Similarity=0.116 Sum_probs=195.8
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 111 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~A 111 (447)
+..++||+.+. +++| .+|.+.+++.+.......| +.....++.+.+++.+. .+.+++++++|+++++..+
T Consensus 35 ~~~~i~l~~~~--~~~~-~~~~~~~al~~~~~~~~~Y------~~~~g~~lr~~ia~~~~-~~~~~i~~t~G~~~~l~~~ 104 (371)
T PRK05166 35 VPRIAKLGSNE--NPLG-PSPAVRRAFADIAELLRLY------PDPQGRALREAIAARTG-VPADRIILGNGSEDLIAVI 104 (371)
T ss_pred CcceEEcCCCC--CCCC-CCHHHHHHHHHHHHHhhcC------CCCcHHHHHHHHHHHhC-cCHHHEEEcCCHHHHHHHH
Confidence 44789998764 5566 5788888888755432222 11112368888888763 4667899999999999888
Q ss_pred HHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHH
Q 013204 112 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191 (447)
Q Consensus 112 l~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (447)
+.... ..++.|++.+|.|.......... |... ..++....+. .+++
T Consensus 105 ~~~~~--------~~gd~vli~~P~y~~~~~~~~~~-g~~~------------~~v~~~~~~~-------------~~~~ 150 (371)
T PRK05166 105 CRAVL--------RPGDRVVTLYPSFPLHEDYPTMM-GARV------------ERVTVTPDLG-------------FDLD 150 (371)
T ss_pred HHHhc--------CCCCEEEEcCCChHHHHHHHHHc-CCeE------------EEeecCCCCC-------------CCHH
Confidence 87653 33578899999997764333221 2111 1111110000 0136
Q ss_pred HHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc-ccccccC-CCCCCee
Q 013204 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MFGCDKY-SIKPDLV 269 (447)
Q Consensus 192 ~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~-~~~~~~~-~~~~d~v 269 (447)
++++.+.. +...+++.+|.|++ | ...+.+.+++|.++|++ ++++|+||+|..|...+. ....... ...+.++
T Consensus 151 ~l~~~~~~---~~~~v~l~~p~NPt-G-~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi 224 (371)
T PRK05166 151 ALCAAVAR---APRMLMFSNPSNPV-G-SWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWI 224 (371)
T ss_pred HHHHhhhc---CCCEEEEeCCCCCC-C-CCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEE
Confidence 66666642 22334455665555 4 45577788888888875 899999999987742221 1111111 1122333
Q ss_pred ---eecccCCCcccceeEEEe-ChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHH
Q 013204 270 ---SFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKF 344 (447)
Q Consensus 270 ---~~sK~l~gg~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l 344 (447)
+|||.++.+++|+|+++. ++++++.+... . ..+..+.+++.++.+++..-+ -++..+.++++.+.+
T Consensus 225 ~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~-------~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l 295 (371)
T PRK05166 225 VLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRV-------R--TPFNVNGAAQAAALAALDDEEHLAKGVALALAERERL 295 (371)
T ss_pred EEeechHhhhcchhheeeeecCCHHHHHHHHHh-------c--cCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 589999843389999775 67888877531 1 234557777776776664211 122334455555666
Q ss_pred HHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-----CEEEEecCCCCCH
Q 013204 345 QDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSP 419 (447)
Q Consensus 345 ~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-----~~iR~~~~~~~t~ 419 (447)
.+.|++. ++ ...+..|.++.+.+..+ ...+.+.|+++||.+.++. +.+|++ ..+.
T Consensus 296 ~~~L~~~---g~-~~~p~~g~fl~~~~~~~-------------~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~---~~~~ 355 (371)
T PRK05166 296 KKELAEM---GY-RIAPSRANFLFFDARRP-------------ASAVAEALLRQGVIVKPWKQPGFETFIRVS---IGSP 355 (371)
T ss_pred HHHHHHC---cC-eeCCCcCCEEEEeCCCC-------------HHHHHHHHHHCCeEEecCCCCCCCCeEEEE---cCCH
Confidence 6666654 22 12344566766654321 3458889999999998762 569999 3467
Q ss_pred HHHHHHHHHHHHHH
Q 013204 420 EEVDELISKYGKAL 433 (447)
Q Consensus 420 e~i~~~~~~l~~~l 433 (447)
++.+++.+.|++.+
T Consensus 356 ~~~~~l~~~l~~i~ 369 (371)
T PRK05166 356 EENDHFVAALDKVL 369 (371)
T ss_pred HHHHHHHHHHHHHh
Confidence 77888888887654
No 216
>PRK10534 L-threonine aldolase; Provisional
Probab=99.83 E-value=2.2e-18 Score=165.64 Aligned_cols=323 Identities=13% Similarity=0.113 Sum_probs=189.1
Q ss_pred EEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHH
Q 013204 35 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKL 114 (447)
Q Consensus 35 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~ 114 (447)
.+||+|+.+. | .+|.+.+++.+....... .++.+...+|++.+++.+ +.+.+++++||++++..++..
T Consensus 1 ~~~~~~~~~~---~-p~~~~~~a~~~~~~~~~~-----Y~~~~~~~~L~~~la~~~---g~~~~~v~~~g~~a~~~~l~~ 68 (333)
T PRK10534 1 MIDLRSDTVT---R-PSRAMLEAMMAAPVGDDV-----YGDDPTVNALQDYAAELS---GKEAALFLPTGTQANLVALLS 68 (333)
T ss_pred CcccccccCC---C-CCHHHHHHHHhccCCCcc-----cCCCHHHHHHHHHHHHHh---CCCeEEEeCchHHHHHHHHHH
Confidence 3788888532 3 689999998775543221 125677889999999986 445678999999999888875
Q ss_pred HHHHHHhcCCCCcceEEEEcCCCccchh-h-hhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHH
Q 013204 115 VWYYNNALGRPNKKKFIARQKSYHGSTL-I-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 192 (447)
Q Consensus 115 ~~~~~~~~~~~~~~~vi~~~~~yhg~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (447)
.. ...++|++..++|.-... . .....+.. ...++....+. .++++
T Consensus 69 ~~--------~~gd~vi~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~-------------~d~~~ 115 (333)
T PRK10534 69 HC--------ERGEEYIVGQAAHNYLYEAGGAAVLGSIQ------------PQPIDAAADGT-------------LPLDK 115 (333)
T ss_pred hc--------CCCCeeEEechhhhhHhcCCchHHhcCce------------EEeecCCCCCC-------------CCHHH
Confidence 42 223567765555421111 0 11111000 00111111111 01366
Q ss_pred HHHHHHhhC--CCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc-ccccccCCCCCC--
Q 013204 193 LEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MFGCDKYSIKPD-- 267 (447)
Q Consensus 193 le~~l~~~~--~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~-~~~~~~~~~~~d-- 267 (447)
|++.+.... ...+.+|+++..+ .|. +.+.+.+++|.++|++|+++|++||+|. |+..+. ........-.+|
T Consensus 116 l~~~i~~~~~~~~~~~lv~l~np~--~G~-v~~~~~l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~~~~~~~~~~~~~~ 191 (333)
T PRK10534 116 VAAKIKPDDIHFARTRLLSLENTH--NGK-VLPREYLKQAWEFTRERNLALHVDGARI-FNAVVAYGCELKEITQYCDSF 191 (333)
T ss_pred HHHhhcccCcCcccceEEEEecCC--CCe-ecCHHHHHHHHHHHHHcCCeEEeeHHHH-HHHHHHcCCCHHHHHhcCCEE
Confidence 666553210 0134555555322 354 4467889999999999999999999976 432110 000100001123
Q ss_pred eeeecccCCCccccee-EEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHH
Q 013204 268 LVSFAKALSSAYMPIG-AILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQD 346 (447)
Q Consensus 268 ~v~~sK~l~gg~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~ 346 (447)
+++|||+++. ++| ++++++++++.+.... . .....+..+.++++++.++++.. .+..+...+.++++.+
T Consensus 192 ~~s~SK~~~~---~~G~~~~~~~~~i~~~~~~~----~-~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l~~ 261 (333)
T PRK10534 192 TICLSKGLGT---PVGSLLVGNRDYIKRARRWR----K-MTGGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWLAE 261 (333)
T ss_pred EEEeEcCCCC---cccceEEcCHHHHHHHHHHH----H-HhCCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHH
Confidence 4579998764 467 5778999988876321 0 00112223345566666666531 2233344445667778
Q ss_pred hHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeCCEEEEecCCCCCHHHHHHHH
Q 013204 347 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELI 426 (447)
Q Consensus 347 ~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g~~iR~~~~~~~t~e~i~~~~ 426 (447)
.|+++ +..+ .++.+.++.+.+... ....+.+.|+++||++.++ ..+|++..+.+|++++++++
T Consensus 262 ~L~~~-g~~~---~~~~~nfv~~~~~~~------------~~~~~~~~l~~~gi~v~~~-~~~rl~~~~r~t~e~~~~~~ 324 (333)
T PRK10534 262 QLREA-GADV---MRQDTNMLFVRVGEE------------QAAALGEYMRERNVLINAS-PIVRLVTHLDVSREQLAEVV 324 (333)
T ss_pred HHHhC-CCcc---CCCCceEEEEECCch------------hHHHHHHHHHHcCeeecCC-ceEEEEEEeCCCHHHHHHHH
Confidence 88775 2222 233566766665421 1345778899999999875 46899876678999999999
Q ss_pred HHHHHHH
Q 013204 427 SKYGKAL 433 (447)
Q Consensus 427 ~~l~~~l 433 (447)
++|++.+
T Consensus 325 ~~l~~~~ 331 (333)
T PRK10534 325 AHWRAFL 331 (333)
T ss_pred HHHHHHh
Confidence 9998765
No 217
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.83 E-value=1.8e-17 Score=162.67 Aligned_cols=341 Identities=14% Similarity=0.114 Sum_probs=196.1
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCC---cccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhhH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP---FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEA 107 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGseA 107 (447)
+...+||..+... + ..++.+.+++.+...... ..+....+..+....+++.+...+. ..+++++++++|++++
T Consensus 32 ~~~~~~l~~g~p~--~-~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~a 108 (394)
T PRK06836 32 ADNVFDFSLGNPS--V-PPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGA 108 (394)
T ss_pred CCCeEEecCcCCC--C-CCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHH
Confidence 4567899776321 2 246788888877765321 1111112223333344444443321 2356789999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
+..+++.+. ..++.|++.+++|.++...... .|... ..++..+. .+ .
T Consensus 109 l~~~~~~l~--------~~gd~Vli~~p~~~~~~~~~~~-~g~~v------------~~v~~~~~-----------~~-~ 155 (394)
T PRK06836 109 LNVALKAIL--------NPGDEVIVFAPYFVEYRFYVDN-HGGKL------------VVVPTDTD-----------TF-Q 155 (394)
T ss_pred HHHHHHHhc--------CCCCEEEEcCCCCccHHHHHHH-cCCEE------------EEEecCCc-----------cC-c
Confidence 999888653 2347899999999886543322 12111 11111100 00 0
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHh------cCCEEEEehhhcCCCcccccccccc
Q 013204 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK------YDILFIADEVICAFGRLGTMFGCDK 261 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~------~g~~li~DEv~~g~g~~g~~~~~~~ 261 (447)
.+++++++.+. + ++++|++...++.+| ...+.+.+++|.++|++ ||+++|.||+|.++...+.... ..
T Consensus 156 ~d~~~l~~~~~---~-~~~~v~~~~p~NPtG-~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~-~~ 229 (394)
T PRK06836 156 PDLDALEAAIT---P-KTKAVIINSPNNPTG-VVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVP-YI 229 (394)
T ss_pred CCHHHHHhhcC---c-CceEEEEeCCCCCCC-cCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCC-Ch
Confidence 11366777664 2 344444444444445 45577889999999999 8999999999987744332111 00
Q ss_pred CCCCCCee---eecccCCCcccceeEEEeChhHHHH--hhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHH
Q 013204 262 YSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEV--IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQ 336 (447)
Q Consensus 262 ~~~~~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~ 336 (447)
....+.++ +|||.++.+++++|++++++++.+. +........ .....+..+++.+.++...++ +......
T Consensus 230 ~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l~---~~~~~~~ 304 (394)
T PRK06836 230 FKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAALVFAN--RILGFVNAPALMQRVVAKCLD---ATVDVSI 304 (394)
T ss_pred HHccCcEEEEecchhhccCcceeeEEEecCHHHhhhHHHHHHHHHHh--hccccccCCHHHHHHHHHHhC---ChHHHHH
Confidence 11112333 4799998433899999998876332 110000000 001123445556665555443 2222345
Q ss_pred HHHHHHHHHHhHhhccCCCceeeEeee-eeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-----CEEE
Q 013204 337 VNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIM 410 (447)
Q Consensus 337 ~~~~~~~l~~~L~~l~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-----~~iR 410 (447)
++++.+.+.+.|++. +. ...... |.++.+.++... ...+.+.|.++||.+.++. +.+|
T Consensus 305 ~~~~r~~l~~~L~~~---g~-~~~~~~gg~~~~~~~~~~~------------~~~~~~~l~~~gv~v~~g~~f~~~~~iR 368 (394)
T PRK06836 305 YKRNRDLLYDGLTEL---GF-ECVKPQGAFYLFPKSPEED------------DVAFCEKAKKHNLLLVPGSGFGCPGYFR 368 (394)
T ss_pred HHHHHHHHHHHHHhC---CC-EeecCCceEEEEEeCCCCC------------HHHHHHHHHhCCEEEECchhcCCCCeEE
Confidence 555666666666554 22 223333 445555443211 3456788899999998863 5799
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 411 MSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 411 ~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
|+. ..+++++++++++|++.+++.+
T Consensus 369 i~~--~~~~~~~~~~i~~l~~~l~~~~ 393 (394)
T PRK06836 369 LSY--CVDTETIERSLPAFEKLAKEYK 393 (394)
T ss_pred EEe--cCCHHHHHHHHHHHHHHHHHhc
Confidence 995 4799999999999999987653
No 218
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.83 E-value=1.4e-17 Score=161.87 Aligned_cols=302 Identities=14% Similarity=0.182 Sum_probs=186.0
Q ss_pred hHHHHHHHHHHHhcCcCC-CCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchh-hhhcccCCcccc
Q 013204 77 KPSLDLAKELLEMFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL-IAASLSGLPALH 154 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~-~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~-~~~~~~~~~~~~ 154 (447)
+...++.+.+++++...+ .+.+++++||+++++.++..+. .+++++|+..+++++... ......|..
T Consensus 35 ~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~--------~~~~~vlv~~~~~~~~~~~~~a~~~g~~--- 103 (363)
T TIGR02326 35 IVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV--------PKDGKLLVVINGAYGARIVQIAEYLGIP--- 103 (363)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC--------CCCCeEEEEeCChhhHHHHHHHHHcCCc---
Confidence 344566777887774222 2479999999999999998653 233567777777777642 211111211
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
+..++.+.... .+++++++.+... ..+.++.+..+.+.+|.+.+ +++|.++|
T Consensus 104 ---------~~~v~~~~~~~-------------~d~~~l~~~l~~~--~~~~~v~~~~~~~~tG~~~~----i~~I~~l~ 155 (363)
T TIGR02326 104 ---------HHVVDTGEVEP-------------PDVVEVEAILAAD--PAITHIALVHCETTTGILNP----IEAVAKLA 155 (363)
T ss_pred ---------eEEEeCCCCCC-------------CCHHHHHHHHhhC--CCccEEEEEeecCCccccCc----HHHHHHHH
Confidence 11122211000 0137778777642 23345555555666788877 89999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccceeEEEeChhHHHHhhhccCCCC-c-------
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG-S------- 304 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~-~------- 304 (447)
++||+++|+|++|+ +|.. +..... +.+|+++ ++|++.|+ .++|+++++++.++.+........ .
T Consensus 156 ~~~g~~livD~~~~-~g~~--~~~~~~--~~~D~~~~s~~K~l~~p-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (363)
T TIGR02326 156 HRHGKVTIVDAMSS-FGGI--PIDIAE--LHIDYLISSANKCIQGV-PGFGFVIARQAELAACKGNARSLSLDLYDQWRC 229 (363)
T ss_pred HHcCCEEEEEcccc-ccCc--ccchhh--cCccEEEecCccccccC-CcceEEEECHHHHHHhhcCCCceeecHHHHHHH
Confidence 99999999999986 5543 222222 3468775 46999876 578999999988776542110000 0
Q ss_pred c---CcCCCCCCcHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHhHhhccCCCceeeE-eeeeeEEEEEeecCCC
Q 013204 305 F---SHGFTYSGHPVSCAVAIEALKIYKER----NIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKS 376 (447)
Q Consensus 305 ~---~~~~t~~~~~~~~~aa~a~l~~~~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~g~~~~i~~~~~~~ 376 (447)
+ .....|+.+...+.+..++++.+..+ +..++.+++.+++++.|+++ +...+... ...+.+..+.+.....
T Consensus 230 ~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 308 (363)
T TIGR02326 230 MEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDPD 308 (363)
T ss_pred HhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCCC
Confidence 0 01123455666677767777665432 35577778888888888776 22222111 1122333444433110
Q ss_pred CCCCCCCCcchHHHHHHHHHHcCceEEeeC----CEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 377 PNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----DNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g----~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
. ....+.+.|.++||.++++. +.+|+++...++.+++++++++|++++
T Consensus 309 ~---------~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 309 Y---------RFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred C---------CHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 0 13457788999999998762 579999877789999999999998876
No 219
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.83 E-value=2.2e-17 Score=163.46 Aligned_cols=351 Identities=16% Similarity=0.094 Sum_probs=194.9
Q ss_pred EEEecCCccccccCCCC-CHHHHHHHHHHHhcCC-----cccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhh
Q 013204 34 KYLDSLAGLWCTALGGS-EPRLVAAATAQLNTLP-----FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSE 106 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGse 106 (447)
..+||..+... +-.. .+.+.+++.+.+.... ..++...+..+....+++.+.+.+. ...+++|++++|+.+
T Consensus 31 ~~i~l~~g~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~ 108 (416)
T PRK09440 31 GAIMLGGGNPA--HIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQS 108 (416)
T ss_pred CceeccCCCCC--ccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHH
Confidence 46888765321 1101 1255666666554311 1122222233444455555544322 246789999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCcceEEE-EcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCc-ccCCCCCCChhH
Q 013204 107 ANDTQVKLVWYYNNALGRPNKKKFIA-RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY-WRYAHPGETEEE 184 (447)
Q Consensus 107 A~~~Al~~~~~~~~~~~~~~~~~vi~-~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 184 (447)
|+..++++.... .++..++.|++ .+|.|+++...+............. ++.+.. +.+.
T Consensus 109 al~~~~~~l~~~---~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~-------- 168 (416)
T PRK09440 109 AFFYLFNLFAGR---RADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNI---------ELLPEGQFKYH-------- 168 (416)
T ss_pred HHHHHHHHHhcc---ccCCCCCeEEEecCCCchhhHHHhhccCceeeccccc---------ccccccccccC--------
Confidence 999998866310 00012357888 6999998864332211000000000 000000 0000
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCC
Q 013204 185 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI 264 (447)
Q Consensus 185 ~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~ 264 (447)
.+++.++ + .++....++++|.|++| ...+.+.+++|.++|++|++++|.||+|..+ .....+.......
T Consensus 169 ---~d~~~l~--~---~~~~~~i~l~~P~NPTG--~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~-~~~~~~~~~~~~~ 237 (416)
T PRK09440 169 ---VDFEHLH--I---DEDTGAICVSRPTNPTG--NVLTDEELEKLDALARQHNIPLLIDNAYGPP-FPGIIFSEATPLW 237 (416)
T ss_pred ---CCHHHcc--c---CCCceEEEEecCCCCCC--ccCCHHHHHHHHHHHHHcCCcEEEeCCcccc-CCCcchhhcCccc
Confidence 0124444 1 22334555666665555 4568899999999999999999999999633 1111110000011
Q ss_pred CCCee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-----hhcHHHH
Q 013204 265 KPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-----ERNIVEQ 336 (447)
Q Consensus 265 ~~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-----~~~~~~~ 336 (447)
.+.++ +|||. +.+++++|++++++++++.+... ......+.+.+++.++.++++.-. ...+...
T Consensus 238 ~~~vI~~~SfSK~-~~pGlRiG~~i~~~~l~~~~~~~-------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 309 (416)
T PRK09440 238 NPNIILCMSLSKL-GLPGVRCGIVIADEEIIEALSNM-------NGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPF 309 (416)
T ss_pred cCCeEEEeccccc-CCCcceEEEEeCCHHHHHHHHHH-------HHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 22333 68995 44449999999999998887632 112234556777777777664211 0112334
Q ss_pred HHHHHHHHHHhHhhc-cCCCceeeEeee-eeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-----C---
Q 013204 337 VNKIAPKFQDGVKAF-SDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----G--- 406 (447)
Q Consensus 337 ~~~~~~~l~~~L~~l-~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----g--- 406 (447)
++++.+.+++.|++. ...+ .....+. |.++++++..... ....+.+.|.++||.+.++ +
T Consensus 310 ~~~r~~~~~~~L~~~l~~~~-~~~~~p~gg~fiw~~~~~~~~----------~~~~~~~~l~~~gV~v~pg~~F~~~~~~ 378 (416)
T PRK09440 310 YRQKVQLAIALLRRYLPDEP-CLIHKPEGAIFLWLWFKDLPI----------TTEELYQRLKARGVLVVPGHYFFPGLDE 378 (416)
T ss_pred HHHHHHHHHHHHHHhcccCC-eEEecCCCceEEEEECCCCCC----------CHHHHHHHHHHCCEEEechHhhCCCCcc
Confidence 445555566666543 2222 2223444 5666777654110 1345778889999999874 1
Q ss_pred ------CEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 407 ------DNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 407 ------~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
+.+|++ +..+++++++++++|++++++..+
T Consensus 379 ~~~~~~~~iRis--~~~~~~~l~~~i~~l~~~~~~~~~ 414 (416)
T PRK09440 379 DWPHAHQCIRMN--YVQDDEEIEKGIAILAEEVEKAYA 414 (416)
T ss_pred ccCCcCceEEEE--ecCCHHHHHHHHHHHHHHHHHHhh
Confidence 269999 546899999999999999876543
No 220
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.82 E-value=9.4e-18 Score=166.12 Aligned_cols=310 Identities=12% Similarity=0.128 Sum_probs=181.9
Q ss_pred CCChHHHHHHHHHHHhcC---cCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCC
Q 013204 74 RTTKPSLDLAKELLEMFT---ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL 150 (447)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~---~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 150 (447)
+.......+++.+.+.+. +.+++++++++|+++|++.++..+. ..++.|++.+|.|.+.........+.
T Consensus 96 G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~--------~pGD~Vlv~~P~Y~~f~~~~~~~~g~ 167 (447)
T PLN02607 96 GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILA--------DPGDALLVPTPYYPGFDRDLRWRTGV 167 (447)
T ss_pred chHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHhcCCc
Confidence 344455566666655443 2467899999999999999887653 34588999999998875433221222
Q ss_pred ccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhh--CCCcEE-EEEEccccCCCCCccCChhHH
Q 013204 151 PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIA-AFIAEPVIGAGGVIPPPATYF 227 (447)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~a-~vi~epv~~~~G~~~~~~~~l 227 (447)
.. ..+++... +.| ..+++.+++.+... ...+++ +++++|.|+.| .+++++.+
T Consensus 168 ~v------------v~v~~~~~----------~~f-~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG--~~~s~e~l 222 (447)
T PLN02607 168 KI------------VPIHCDSS----------NNF-QVTPQALEAAYQEAEAANIRVRGVLITNPSNPLG--ATVQRSVL 222 (447)
T ss_pred EE------------EEEeCCCC----------CCC-cCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcC--cccCHHHH
Confidence 11 11111100 000 01136666666432 123444 55566666665 56788999
Q ss_pred HHHHHHHHhcCCEEEEehhhcCCCccccccc--cc---cCCC-C-CC-ee---eecccCCCcccceeEEEe-ChhHHHHh
Q 013204 228 EKVQAVVKKYDILFIADEVICAFGRLGTMFG--CD---KYSI-K-PD-LV---SFAKALSSAYMPIGAILV-SPEVSEVI 295 (447)
Q Consensus 228 ~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~--~~---~~~~-~-~d-~v---~~sK~l~gg~~~~g~~~~-~~~~~~~~ 295 (447)
++|.++|++|++++|+||+|.++...+..+. .+ ..+. . ++ ++ ++||.++..++|+|+++. ++++++.+
T Consensus 223 ~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~ 302 (447)
T PLN02607 223 EDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTA 302 (447)
T ss_pred HHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHH
Confidence 9999999999999999999987533322221 11 1111 1 23 22 589999854489999998 66777766
Q ss_pred hhccCCCCccCcCCCC-CCcHHHHHHHHHHHHHHhhhcH--------HHHHHHHHHHHHHhHhhccCCCceeeEee-eee
Q 013204 296 HSQSNTLGSFSHGFTY-SGHPVSCAVAIEALKIYKERNI--------VEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGL 365 (447)
Q Consensus 296 ~~~~~~~~~~~~~~t~-~~~~~~~~aa~a~l~~~~~~~~--------~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~g~ 365 (447)
... ..+ ..+.+++.++.+.|+ ++++ .+++++..+.+.+.|++. ++. ..++ -|.
T Consensus 303 ~~~----------~~~~~~s~~~q~~~~~~L~---d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~---gi~-~~~~~ag~ 365 (447)
T PLN02607 303 RRM----------SSFTLVSSQTQHLLASMLS---DEEFTENYIRTNRERLRKRYEMIVQGLRRA---GIE-CLKGNAGL 365 (447)
T ss_pred HHH----------hhcCCCCHHHHHHHHHHhC---CchhHHHHHHHHHHHHHHHHHHHHHHHHhC---CCC-cccCCeeE
Confidence 421 112 234455555544443 2222 233334444455555543 221 2333 467
Q ss_pred EEEEEeecCCCCCCCCCCCcchHHHHHHHHHH-cCceEEeeC-------CEEEEecCCC-CCHHHHHHHHHHHHHHHHHH
Q 013204 366 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVSG-------DNIMMSPPFI-MSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 366 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~g-------~~iR~~~~~~-~t~e~i~~~~~~l~~~l~~~ 436 (447)
++++++....... .. .....+.+++++ .||.+.|+. +.+|++ +. .+++++++++++|.+++++.
T Consensus 366 fvw~~L~~~~~~~-~~----~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~--fa~~~~~~l~~gl~Ri~~~l~~~ 438 (447)
T PLN02607 366 FCWMNLSPLLETP-TR----EGELALWDSILREVKLNISPGSSCHCSEPGWFRVC--FANMSEDTLEVALKRIHRFMDRR 438 (447)
T ss_pred EEEEEchHhhcCC-Cc----hhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEE--eccCCHHHHHHHHHHHHHHHHHH
Confidence 7788875321000 00 012346666664 699998752 579999 56 48999999999999999765
Q ss_pred HHHH
Q 013204 437 EERV 440 (447)
Q Consensus 437 ~~~~ 440 (447)
+.+-
T Consensus 439 ~~~~ 442 (447)
T PLN02607 439 KTAS 442 (447)
T ss_pred Hhhh
Confidence 5443
No 221
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.82 E-value=5e-18 Score=165.53 Aligned_cols=327 Identities=17% Similarity=0.218 Sum_probs=208.5
Q ss_pred EEecCCccccccCCCCCHHHHHHHHHHHhcCCccc-ccCcC----CChHHHHHHHHHHHhcCcCCC-CeEEEeCChhhHH
Q 013204 35 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH-SFWNR----TTKPSLDLAKELLEMFTASKM-AKVFFTNSGSEAN 108 (447)
Q Consensus 35 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~----~~~~~~~l~~~l~~~~~~~~~-~~v~~~~sGseA~ 108 (447)
|+|-.+. |..++.|.+++.+...+..... +.... ..+...+..+.+++++. .+. ++++|++|+++++
T Consensus 2 Yld~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg-~~~~~~v~~~~~~t~a~ 74 (371)
T PF00266_consen 2 YLDNAGT------GPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLG-APPDEEVVFTSNGTEAL 74 (371)
T ss_dssp EEBTSSS-------B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHT-SSTTEEEEEESSHHHHH
T ss_pred EeeCCCc------cCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcC-Cccccccccccccchhh
Confidence 6775433 4578999999999876532211 11011 12344566777777774 445 7899999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcceEEEEcCCCccch--hhhhc-ccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHH
Q 013204 109 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGST--LIAAS-LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 185 (447)
Q Consensus 109 ~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (447)
+.++..+.... .++++|++....|++.. ...+. ..+... ..++.+.. ...+
T Consensus 75 ~~~~~~l~~~~-----~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v------------~~i~~~~~-------~~~~-- 128 (371)
T PF00266_consen 75 NAVASSLLNPL-----KPGDEVLVTSNEHPSNRYPWEEIAKRKGAEV------------RVIPADPG-------GSLD-- 128 (371)
T ss_dssp HHHHHHHHHHG-----TTTCEEEEEESSHHHHHHHHHHHHHHTTEEE------------EEEEEGTT-------SSCS--
T ss_pred hhhhhcccccc-----ccccccccccccccccccccccccccchhhh------------cccccccc-------chhh--
Confidence 99999773210 34578888888887765 22221 112111 11111000 0001
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCC
Q 013204 186 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK 265 (447)
Q Consensus 186 ~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~ 265 (447)
++++++.+. +++.+|++..+.+..|.+.| +++|.++|+++|+++++|-+|+ +|.. . ++.....
T Consensus 129 ----~~~~~~~l~----~~~~lv~~~~~~~~tG~~~p----i~~I~~~~~~~~~~~~vD~~~~-~g~~--~--id~~~~~ 191 (371)
T PF00266_consen 129 ----LEDLEEALN----PDTRLVSISHVENSTGVRNP----IEEIAKLAHEYGALLVVDAAQS-AGCV--P--IDLDELG 191 (371)
T ss_dssp ----HHHHHHHHH----TTESEEEEESBETTTTBBSS----HHHHHHHHHHTTSEEEEE-TTT-TTTS--S----TTTTT
T ss_pred ----hhhhhhhhc----cccceEEeecccccccEEee----eceehhhhhccCCceeEechhc-cccc--c--ccccccc
Confidence 377777775 57889999999999998888 9999999999999999999987 5544 2 2333345
Q ss_pred CCeeeec--ccCCCcccceeEEEeChhHHHHhhhccCCCCcc-----------CcCC---CCCCcHHHHHHHHHHHHHHh
Q 013204 266 PDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF-----------SHGF---TYSGHPVSCAVAIEALKIYK 329 (447)
Q Consensus 266 ~d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~---t~~~~~~~~~aa~a~l~~~~ 329 (447)
+|++++| | |.|+ .++|+++.+++.++.+.......... .... .-+.+...+.+..++++.+.
T Consensus 192 ~D~~~~s~~K-l~gp-~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~ 269 (371)
T PF00266_consen 192 ADFLVFSSHK-LGGP-PGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLE 269 (371)
T ss_dssp ESEEEEESTS-TTSS-STEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHH
T ss_pred cceeeecccc-cCCC-CchhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhh
Confidence 7988876 8 8887 68999999999988885321111000 0000 01345556666667777764
Q ss_pred h---hcHHHHHHHHHHHHHHhHhhccCCCcee--eEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEe
Q 013204 330 E---RNIVEQVNKIAPKFQDGVKAFSDSPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV 404 (447)
Q Consensus 330 ~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~--~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~ 404 (447)
+ +++.++..++.+++++.|+++....+.. .....+.++.+.+.... ...+.+.|.++||.++.
T Consensus 270 ~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------~~~~~~~L~~~~I~~~~ 337 (371)
T PF00266_consen 270 EIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGSD------------ADDVVKYLEERGIAVST 337 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTSS------------HHHHHHHHHHHTEEEEE
T ss_pred ccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCCC------------HHHHHHHHhhcCEEEec
Confidence 3 4456778888888888888873222211 12334556666664322 45688889999999987
Q ss_pred e-------------CCEEEEecCCCCCHHHHHHH
Q 013204 405 S-------------GDNIMMSPPFIMSPEEVDEL 425 (447)
Q Consensus 405 ~-------------g~~iR~~~~~~~t~e~i~~~ 425 (447)
+ ++.+|++++..+|++|||++
T Consensus 338 G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 338 GSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp STTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred cCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 3 16899999999999999975
No 222
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.82 E-value=1.1e-17 Score=164.70 Aligned_cols=343 Identities=11% Similarity=0.021 Sum_probs=194.2
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccC-cCCChHHHHHHHHHHHhcC--cCCCCeEEEeCChhhH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW-NRTTKPSLDLAKELLEMFT--ASKMAKVFFTNSGSEA 107 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~~~~~~v~~~~sGseA 107 (447)
.+..++|+..+. ..++ .+|.+.+++.+.+.+........ ..+.....++.+.+++++. ...++++++++|++++
T Consensus 31 ~~~~~i~l~~~~--~~~~-~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~a 107 (402)
T TIGR03542 31 PSADIIRLGIGD--TTQP-LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCD 107 (402)
T ss_pred CCCCeEEcCCCC--CCCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHH
Confidence 367889987764 3333 47888999888876531100000 1123334456666665431 2567899999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 108 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 108 ~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
+.....+. .+++.|++.+|+|.++.......+. +.....-+. ...+..+++... +.+.
T Consensus 108 l~~l~~l~---------~~gd~Vlv~~P~y~~~~~~~~~~g~-~~~~~~~~~-~~~~~~v~~~~~----------~~~~- 165 (402)
T TIGR03542 108 VFRLQSLF---------GSDNTVAVQDPVYPAYVDSNVMAGR-AGVLDDDGR-YSKITYLPCTKE----------NNFI- 165 (402)
T ss_pred HHHHHHhc---------CCCCEEEEeCCCCcchHHHHHHcCC-ccccccccc-cceEEEeecchh----------hCCC-
Confidence 98753332 2346899999999988654443322 100000000 001111221100 0000
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc-cccc-ccCCCC
Q 013204 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MFGC-DKYSIK 265 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~-~~~~-~~~~~~ 265 (447)
.++++ .++..+++++.|.|++| .+.+.+.+++|.++|++|++++|.||+|..|...+. .... ...+..
T Consensus 166 ---~~~~~-----~~~~~~i~l~nP~NPTG--~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~ 235 (402)
T TIGR03542 166 ---PDLPE-----EPKIDIIYLCSPNNPTG--TVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAK 235 (402)
T ss_pred ---CCccc-----cCCceEEEEeCCCCCCC--ccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCc
Confidence 11111 02234455566655555 567889999999999999999999999998743331 1111 111111
Q ss_pred CCe---eeecccCCCcccceeEEEeChhHH--------HHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHH--Hh-hh
Q 013204 266 PDL---VSFAKALSSAYMPIGAILVSPEVS--------EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI--YK-ER 331 (447)
Q Consensus 266 ~d~---v~~sK~l~gg~~~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~--~~-~~ 331 (447)
..+ -+|||.++.+++|+|+++++++++ ..+.. . ......+.+.+++.++.+.++. .. -.
T Consensus 236 ~~vi~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~------~-~~~~~~~~s~~~q~~~~~~l~~~~~~~~~ 308 (402)
T TIGR03542 236 ECAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWER------R-QCTKFNGASYPVQRAAEAAYAGEGLQPIL 308 (402)
T ss_pred ccEEEEecCccccCCCCcceEEEEecHHHhhcchhhHHHHHHH------H-hhhcccCCCHHHHHHHHHHHcCcchhHHH
Confidence 122 268999975449999999998876 22211 0 0011123456677666555541 10 11
Q ss_pred cHHHHHHHHHHHHHHhHhhccCCCceeeEee-eeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeC---
Q 013204 332 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG--- 406 (447)
Q Consensus 332 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g--- 406 (447)
+....++++.+.+.+.|++. + .....+ .|.++.+.+..... ...+...|+ +.||.+.++.
T Consensus 309 ~~~~~~~~~~~~~~~~L~~~---~-~~~~~~~~~~f~~v~l~~~~~-----------~~~l~~~l~~~~gv~v~pg~~f~ 373 (402)
T TIGR03542 309 EAISYYMENARILRKALEAA---G-FKVYGGEHAPYLWVKTPEGIS-----------SWDFFDFLLYQYHVVGTPGSGFG 373 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhc---C-ceecCCCceeEEEEECCCCCC-----------HHHHHHHHHHhCCEEEeCchhhC
Confidence 22344555556666666654 2 112233 35577777653211 234677766 5799998752
Q ss_pred ----CEEEEecCCCCCHHHHHHHHHHHHHH
Q 013204 407 ----DNIMMSPPFIMSPEEVDELISKYGKA 432 (447)
Q Consensus 407 ----~~iR~~~~~~~t~e~i~~~~~~l~~~ 432 (447)
+.+|++ +..+++++++++++|+++
T Consensus 374 ~~~~~~iRis--~~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 374 PSGEGFVRFS--AFGKRENIVEACERIKEA 401 (402)
T ss_pred CCCCCEEEEE--ecCCHHHHHHHHHHHHhh
Confidence 469999 556899999999999875
No 223
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.82 E-value=1.8e-17 Score=160.90 Aligned_cols=324 Identities=14% Similarity=0.140 Sum_probs=191.5
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 111 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~A 111 (447)
....+||..+. ++++ .+|.+.+++.+.+.....+ +.....+|.+.+++++ ..++++|++++|+++++..+
T Consensus 21 ~~~~i~l~~~~--n~~~-~~~~~~~a~~~~~~~~~~Y------~~~~~~~Lr~aia~~~-~v~~~~I~it~G~~~~i~~~ 90 (360)
T PRK07392 21 PDAILDFSASI--NPLG-PPESVIAAIQSALSALRHY------PDPDYRELRLALAQHH-QLPPEWILPGNGAAELLTWA 90 (360)
T ss_pred cccEEEeCCcC--CCCC-CCHHHHHHHHHHHHHhhcC------CCcCHHHHHHHHHHHh-CcChhhEEECCCHHHHHHHH
Confidence 34678987553 5666 6789999988777542211 1122457778888876 45778999999999999988
Q ss_pred HHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHH
Q 013204 112 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191 (447)
Q Consensus 112 l~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (447)
++.+. + .+.|++.+|+|.+........+.... .++...... .+. + ..
T Consensus 91 ~~~l~--------~-g~~vlv~~P~y~~~~~~~~~~g~~~~-------------~v~~~~~~~--~~~-~--------~~ 137 (360)
T PRK07392 91 GRELA--------Q-LRAVYLITPAFGDYRRALRAFGATVK-------------ELPLPLDQP--SPG-L--------TL 137 (360)
T ss_pred HHHhC--------C-CCeEEEECCCcHHHHHHHHHcCCeEE-------------EEecccccC--Ccc-c--------cc
Confidence 87642 2 35899999999888655554332211 111100000 000 0 02
Q ss_pred HHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccc-cccCCCCCCee-
Q 013204 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPDLV- 269 (447)
Q Consensus 192 ~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~-~~~~~~~~d~v- 269 (447)
+++++.... +.....++++|.|++| .+. + .++|.++++++++ +|+||+|.+|...+.... .......+.++
T Consensus 138 ~~~~~~~~~-~~~~~~~l~nP~NPTG-~~~-~---~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~ 210 (360)
T PRK07392 138 RLQTLPPQL-TPNDGLLLNNPHNPTG-KLW-S---REAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLII 210 (360)
T ss_pred CHHHHHHhc-cCCCEEEEeCCCCCCC-CCc-C---HHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEE
Confidence 233333222 2334466666766655 444 3 4567777888885 666999998854442111 11112123333
Q ss_pred --eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-hhcHHHHHHHHHHHHHH
Q 013204 270 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQD 346 (447)
Q Consensus 270 --~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-~~~~~~~~~~~~~~l~~ 346 (447)
+|||.++-+++++|++++++++++.+... . ..++.+.+++.++.++++... .+...+.++++.+++.+
T Consensus 211 i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~-------~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 281 (360)
T PRK07392 211 LRSLTKFYSLPGLRLGYAIAHPDRLQRWQQW-------R--DPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQ 281 (360)
T ss_pred EEechhhhcCCchheeeeeCCHHHHHHHHhh-------C--CCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 68999883338999999999998887531 1 245667888888877775211 11223445555566666
Q ss_pred hHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHH-HHcCceEEeeC-------CEEEEecCCCCC
Q 013204 347 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVSG-------DNIMMSPPFIMS 418 (447)
Q Consensus 347 ~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~g-------~~iR~~~~~~~t 418 (447)
.|+.+. .+....+.|.++.+.+.. . ...+.+.+ .++||.+.++. +.+|++ ..+
T Consensus 282 ~L~~~~---~~~~~~~~~~fl~~~~~~-~------------~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~---~~~ 342 (360)
T PRK07392 282 GLASLP---GLTPLPSAANFLLVQSQG-S------------ALQLQEKLLQQHRILIRDCLSFPELGDRYFRVA---VRT 342 (360)
T ss_pred HHHhCC---CcEECCCCCCEEEEEcCC-C------------HHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEE---eCC
Confidence 665542 222233456666665532 1 33466665 56799998762 469999 334
Q ss_pred HHHHHHHHHHHHHHH
Q 013204 419 PEEVDELISKYGKAL 433 (447)
Q Consensus 419 ~e~i~~~~~~l~~~l 433 (447)
.++.+++.+.|++.+
T Consensus 343 ~~~~~~l~~al~~~~ 357 (360)
T PRK07392 343 EAENQRLLEALAAIL 357 (360)
T ss_pred HHHHHHHHHHHHHHh
Confidence 555566666666544
No 224
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.82 E-value=1.4e-17 Score=166.64 Aligned_cols=311 Identities=13% Similarity=0.098 Sum_probs=180.5
Q ss_pred ChHHHHHHHHHHHhcC---cCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcc
Q 013204 76 TKPSLDLAKELLEMFT---ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPA 152 (447)
Q Consensus 76 ~~~~~~l~~~l~~~~~---~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 152 (447)
.+....+++.+.+.+. ..++++|++++|+++|++.++..+. ..++.|++.+|.|.+.........|...
T Consensus 97 ~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~--------~pGD~Vlv~~P~Y~~~~~~~~~~~G~~v 168 (496)
T PLN02376 97 KKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLA--------DPGDVFLIPSPYYAAFDRDLRWRTGVEI 168 (496)
T ss_pred HHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhC--------CCCCEEEECCCCccchHHHHHhhCCCEE
Confidence 3444555555554432 1467899999999999999998763 3457899999999888643322222211
Q ss_pred ccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhh--CCCcEE-EEEEccccCCCCCccCChhHHHH
Q 013204 153 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIA-AFIAEPVIGAGGVIPPPATYFEK 229 (447)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~a-~vi~epv~~~~G~~~~~~~~l~~ 229 (447)
..+++... +.+. .+++.+++.+... ...+++ +++++|.|++| .+.+.+.+++
T Consensus 169 ------------v~v~~~~~----------~~~~-~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG--~~~s~e~l~~ 223 (496)
T PLN02376 169 ------------IPVPCSSS----------DNFK-LTVDAADWAYKKAQESNKKVKGLILTNPSNPLG--TMLDKDTLTN 223 (496)
T ss_pred ------------EEEeCCCC----------ccCc-CCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCC--ccCCHHHHHH
Confidence 11222100 0000 0124555443221 112344 55566666665 5668899999
Q ss_pred HHHHHHhcCCEEEEehhhcCCCccccccc-c-cc---CC---CCCCe----eeecccCCCcccceeEEEeC-hhHHHHhh
Q 013204 230 VQAVVKKYDILFIADEVICAFGRLGTMFG-C-DK---YS---IKPDL----VSFAKALSSAYMPIGAILVS-PEVSEVIH 296 (447)
Q Consensus 230 l~~l~~~~g~~li~DEv~~g~g~~g~~~~-~-~~---~~---~~~d~----v~~sK~l~gg~~~~g~~~~~-~~~~~~~~ 296 (447)
|.++|++|++++|+||+|..+...+..+. . +. +. +.++. -+|||.++.+++++|++++. +.+.+.+.
T Consensus 224 L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~ 303 (496)
T PLN02376 224 LVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCAR 303 (496)
T ss_pred HHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHH
Confidence 99999999999999999998754443221 1 11 11 12342 26899987544999999984 55666543
Q ss_pred hccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh-hc----HHHHHHHHHHHHHHhHhhccCCCceeeEe-eeeeEEEEE
Q 013204 297 SQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RN----IVEQVNKIAPKFQDGVKAFSDSPIIGEIR-GTGLILGTE 370 (447)
Q Consensus 297 ~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~----~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~g~~~~i~ 370 (447)
.. . .....+.+++.++.+.|+.-+- ++ ..++++++.+.+.+.|++. ++. ... .-|.+++++
T Consensus 304 ~~-------~--~~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~---gi~-~~~~~aG~flwi~ 370 (496)
T PLN02376 304 KM-------S--SFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA---DIA-CLTSNAGLFAWMD 370 (496)
T ss_pred HH-------h--hcCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCc-ccCCCceEEEEEE
Confidence 21 1 1112355666655555531110 11 1233444445555555543 221 222 345778888
Q ss_pred eecCCCCCCCCCCCcchHHHHHHHHHH-cCceEEeeC-------CEEEEecCCC-CCHHHHHHHHHHHHHHHHHHHH
Q 013204 371 FADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVSG-------DNIMMSPPFI-MSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~g-------~~iR~~~~~~-~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
+.........+ .....+.+.+++ .||.+.|+. +.+|++ +. .+++++++++++|++++.+.++
T Consensus 371 l~~~~~~~~~~----~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~--fa~~~~~~l~~al~rl~~~l~~~~~ 441 (496)
T PLN02376 371 LRHLLRDRNSF----ESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRIC--FANMDDDTLHVALGRIQDFVSKNKN 441 (496)
T ss_pred chhhhccCCch----hHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEE--eeCCCHHHHHHHHHHHHHHHHHhhh
Confidence 75421110000 012346677765 599999852 469999 55 5889999999999999975543
No 225
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.82 E-value=8e-18 Score=165.70 Aligned_cols=341 Identities=11% Similarity=0.049 Sum_probs=191.4
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcC-----CcccccCcCCChHHHHHHHHHHHhcCc-----CCCCeEEE-
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL-----PFYHSFWNRTTKPSLDLAKELLEMFTA-----SKMAKVFF- 100 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~~-----~~~~~v~~- 100 (447)
+...+|+..|.... +. .++.+.+++.+++... ...|. +.....++.+.+++++.. ..+++|++
T Consensus 28 ~~~~i~l~~g~~~~-~~-~~~~~~~~~~~a~~~~~~~~~~~~Y~----~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~ 101 (404)
T PTZ00376 28 SPSKVNLGIGAYRD-EN-GKPYVLESVRKAEKIIAEKNLDKEYL----PIEGLQSFIEAAQKLLFGEASYALAEKRIATV 101 (404)
T ss_pred CcccEecccceeEC-CC-CCEehhhHHHHHHHHhccccCCCCCC----CCCCCHHHHHHHHHHhcCCCccccccCeEEEe
Confidence 45678887664211 12 2334455555554211 11122 233344555555555421 25568884
Q ss_pred -eCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCC
Q 013204 101 -TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPG 179 (447)
Q Consensus 101 -~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (447)
+++|++|...++.++... . ..++.|++.+|+|+++.......+.... .++..+.
T Consensus 102 ~t~G~~~al~~~~~~l~~~----~-~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~-------------~v~l~~~------- 156 (404)
T PTZ00376 102 QALSGTGALRLGFEFLKRF----L-PAGTTVYVSNPTWPNHVNIFKSAGLNVK-------------EYRYYDP------- 156 (404)
T ss_pred eccCcchHHHHHHHHHHHh----c-CCCCEEEEcCCCchhHHHHHHHcCCcee-------------eccccCc-------
Confidence 889999999887654322 1 2347899999999998655554333221 1111000
Q ss_pred CChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc--cc
Q 013204 180 ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MF 257 (447)
Q Consensus 180 ~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~--~~ 257 (447)
+.+ ..+++.+++.+....+++...++.+|.|++| ...+.+.+++|.++|++|++++|.||+|.+|...+. ..
T Consensus 157 ---~~~-~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG--~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~ 230 (404)
T PTZ00376 157 ---KTK-GLDFDGMLEDLRTAPNGSVVLLHACAHNPTG--VDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDA 230 (404)
T ss_pred ---ccC-CcCHHHHHHHHHhCCCCCEEEEeCCCCCCCC--CCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHH
Confidence 000 0113667777654333334344455656665 566889999999999999999999999998754321 00
Q ss_pred -ccc-cCCCCCCee---eecccCCCcccceeEE---EeChhHHHHhhhccCCCCccCcCCCC-CCcHHHHHHHHHHHHHH
Q 013204 258 -GCD-KYSIKPDLV---SFAKALSSAYMPIGAI---LVSPEVSEVIHSQSNTLGSFSHGFTY-SGHPVSCAVAIEALKIY 328 (447)
Q Consensus 258 -~~~-~~~~~~d~v---~~sK~l~gg~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~t~-~~~~~~~~aa~a~l~~~ 328 (447)
... .....+.++ +|||.++..++|+|++ ++++++++.+...- ... ...++ +.+++++.++.++++.-
T Consensus 231 ~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~---~~~-~~~~~~~~~~~~q~~~~~~l~~~ 306 (404)
T PTZ00376 231 YAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQL---KLI-IRPMYSSPPIHGARIADRILSDP 306 (404)
T ss_pred HHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHH---HHH-HhhhcCCCchHHHHHHHHHhCCH
Confidence 111 111112333 6899998433999998 56777555442110 000 11223 33556777776666421
Q ss_pred h--------hhcHHHHHHHHHHHHHHhHhhccCCC-ceeeEeeeeeE-EEEEeecCCCCCCCCCCCcchHHHHHHHHHHc
Q 013204 329 K--------ERNIVEQVNKIAPKFQDGVKAFSDSP-IIGEIRGTGLI-LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH 398 (447)
Q Consensus 329 ~--------~~~~~~~~~~~~~~l~~~L~~l~~~~-~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 398 (447)
+ -.+..++++++.+.+.+.|+++ ..+ ......+.|.+ +++.+. ..+.++|+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~~~p~gg~f~~~~~~----------------~~~~~~L~~~ 369 (404)
T PTZ00376 307 ELRAEWLSELKEMSGRIQNMRQLLYDELKAL-GSPGDWEHIINQIGMFSFTGLT----------------KEQVERLIEK 369 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcccccccCceEEEecCCC----------------HHHHHHHHHh
Confidence 1 0122345566666676777665 211 11222344443 334331 2366777766
Q ss_pred -CceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 399 -GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 399 -Gi~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
||.+.+++ |++.. ..+++++++++++|++++.
T Consensus 370 ~~v~v~p~~---Ris~~-~~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 370 YHIYLLDNG---RISVA-GLTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred CCEeecCCC---eEEEe-ccCHHhHHHHHHHHHHHHh
Confidence 99988875 88832 2799999999999998865
No 226
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.82 E-value=1.4e-17 Score=161.62 Aligned_cols=336 Identities=14% Similarity=0.126 Sum_probs=188.3
Q ss_pred CCCCHHHHHHHHHHHhcCCcccc----cCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcC
Q 013204 48 GGSEPRLVAAATAQLNTLPFYHS----FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 123 (447)
Q Consensus 48 G~~~p~v~~a~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~ 123 (447)
|+..|.+++++.+........+. ......+...++.+++++.+ +.+++++++|+++++..++....
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~---g~~~i~~~~g~t~al~~~l~~~~------- 80 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL---GMDEARVTPGAREGKFAVMHSLC------- 80 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc---CCceEEEeCCHHHHHHHHHHHhc-------
Confidence 56788999998887743222111 01112356788999999887 34789999999999999998653
Q ss_pred CCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCC-
Q 013204 124 RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP- 202 (447)
Q Consensus 124 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~- 202 (447)
.++++|++..++|.+.... ....|... ..++...... + ..+++++++.+.....
T Consensus 81 -~~gd~Vl~~~~~~~~~~~~-~~~~g~~~------------~~v~~~~~~~----------~-~~d~~~l~~~l~~~~~~ 135 (361)
T cd06452 81 -EKGDWVVVDGLAHYTSYVA-AERAGLNV------------REVPNTGHPE----------Y-HITPEGYAEVIEEVKDE 135 (361)
T ss_pred -CCCCEEEEcCCcchHHHHH-HHhcCCEE------------EEEecCCCCC----------c-ccCHHHHHHHHHHHhhc
Confidence 2346677766665544322 22222111 1111110000 0 0113667776653211
Q ss_pred --CcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee--eecccCCCc
Q 013204 203 --ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSA 278 (447)
Q Consensus 203 --~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v--~~sK~l~gg 278 (447)
.++++|+++..++..|...+ +++|.++|++||+++|+||+|. +|.. .+....++ .|++ +++|.++++
T Consensus 136 ~~~~~~lv~l~~p~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~--~~~~~~~~--~d~~~~s~~K~l~~~ 206 (361)
T cd06452 136 FGKPPALALLTHVDGNYGNLHD----AKKIAKVCHEYGVPLLLNGAYT-VGRM--PVSGKELG--ADFIVGSGHKSMAAS 206 (361)
T ss_pred cCCCceEEEEECCCCCCeeecc----HHHHHHHHHHcCCeEEEECCcc-cCCc--CCCHHHcC--CCEEEecCCccccCC
Confidence 24566666666666676655 8999999999999999999997 4322 12222233 4655 567999876
Q ss_pred ccceeEEEeChhHHHHhhhccCCCCccCcCCCC--CCcHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHhHhhccCCC
Q 013204 279 YMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY--SGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSP 355 (447)
Q Consensus 279 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~--~~~~~~~~aa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~ 355 (447)
.++|++++++++++.+........ ......+ +..+..+.+++++++...+ -+...+..++.+++++.|+++++..
T Consensus 207 -~~~G~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~ 284 (361)
T cd06452 207 -APIGVLATTEEWADIVFRTSQMFK-IKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKIEGIK 284 (361)
T ss_pred -CCeEEEEECHHHHHHHhccccccc-cceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 589999999999888754321100 0000001 1112233344455543321 1122222334567777777663322
Q ss_pred ceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC--CEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 356 IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 356 ~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g--~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
++....+...++.++...-... ..........+.+.|+++||.....+ +.+|++.+ .+++++++.++++|++++
T Consensus 285 v~~~~~~~~n~~~~~~~~~~~~---~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~~-g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 285 QLGEKPKNHDLMFFETPSFDEI---AKKHKRRGYFLYSELKKRGIHGIKPGLTRYFKLSTY-GLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred EECCCCCCCceEEEEcCCcchh---hhhccccchhHHHHHHHcCceEEcCCCceEEEEEec-CCCHHHHHHHHHHHHHHh
Confidence 2211122333444433210000 00000012358889999999965433 45888863 479999999999998654
No 227
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=6.2e-17 Score=147.21 Aligned_cols=330 Identities=16% Similarity=0.104 Sum_probs=200.3
Q ss_pred CHHHHHHHHHHHhcCCc-ccccCcCCChHHHHHHHHHHHhcCc-CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcc
Q 013204 51 EPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 128 (447)
Q Consensus 51 ~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~ 128 (447)
.++..+|+.+++..+-+ +|....+......+.++.+.+.+.. ...++|+.|+|-++|++.|+.++- ..+.
T Consensus 80 s~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA--------~p~a 151 (447)
T KOG0259|consen 80 SQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLA--------NPGA 151 (447)
T ss_pred CHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhc--------CCCC
Confidence 34778888888865422 2222233445555666665555432 366799999999999999999652 3457
Q ss_pred eEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEE
Q 013204 129 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF 208 (447)
Q Consensus 129 ~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~v 208 (447)
.|++..|+|.-+...+.. .+.... .+++ .|..+++ .+++.+|.++. .+++|.+
T Consensus 152 NILlPrPGfp~Y~~~a~~-~~lEVR--~ydl-----------------LPe~~we----IDL~~veal~D---ENT~Aiv 204 (447)
T KOG0259|consen 152 NILLPRPGFPLYDTRAIY-SGLEVR--YYDL-----------------LPEKDWE----IDLDGVEALAD---ENTVAIV 204 (447)
T ss_pred ceecCCCCCchHHHhhhh-cCceeE--eecc-----------------cCcccce----echHHHHHhhc---cCeeEEE
Confidence 899999999766433322 111111 1111 1112221 22466777665 4678899
Q ss_pred EEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccc-ccc-CCCCCCeee--ecccCCCcccceeE
Q 013204 209 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDK-YSIKPDLVS--FAKALSSAYMPIGA 284 (447)
Q Consensus 209 i~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~-~~~-~~~~~d~v~--~sK~l~gg~~~~g~ 284 (447)
|++|.|+.|+ +++.+-|++|+++|+++|+++|.||||..+.+-+.+|. ... ..+.|-+.+ +||+.--++|++|+
T Consensus 205 viNP~NPcGn--Vys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGW 282 (447)
T KOG0259|consen 205 VINPNNPCGN--VYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGW 282 (447)
T ss_pred EeCCCCCCcc--cccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeee
Confidence 9999999884 56889999999999999999999999987755555543 222 234565543 67976665599999
Q ss_pred EEeChh--H------HHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcH----HHHHHHHHHHHHHhHhhcc
Q 013204 285 ILVSPE--V------SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI----VEQVNKIAPKFQDGVKAFS 352 (447)
Q Consensus 285 ~~~~~~--~------~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~----~~~~~~~~~~l~~~L~~l~ 352 (447)
++.... + .+.+.. +.+. +..+..+-++|.-..|+.- .+++ ...++.+.+.-.+.|+++
T Consensus 283 i~~hD~~gvf~~~~~~q~~~~-------~~~~-~~~p~TiiQ~AlP~IL~kT-p~efF~k~~~~lk~na~l~y~~Lk~I- 352 (447)
T KOG0259|consen 283 IALHDPRGVFRDTKVVQGIKN-------FLDI-IPGPATIIQGALPDILEKT-PEEFFDKKLSFLKSNADLCYSRLKDI- 352 (447)
T ss_pred EEEecccccccchHHHHHHHH-------HHhc-cCCccHhHHHHhHHHHHhC-hHHHHHHHHHHHHhhHHHHHHHHhcC-
Confidence 876431 2 223321 1111 2233334444333333311 1222 244455555555666665
Q ss_pred CCCcee-eEeeeeeEEE-EEeecCCCCCCCCCCCcchHHHHHHHH-HHcCceEEeeC-----CEEEEecCCCCCHHHHHH
Q 013204 353 DSPIIG-EIRGTGLILG-TEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVSG-----DNIMMSPPFIMSPEEVDE 424 (447)
Q Consensus 353 ~~~~~~-~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~g-----~~iR~~~~~~~t~e~i~~ 424 (447)
|.+. .++.+|.++. +.+.-. .+++... ...|+++| .++.+++-|+- +.+|++ +....+.+++
T Consensus 353 --P~l~cp~kPeg~mylmv~l~~s-----~~~~~~d-D~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~--i~~~~~~lee 422 (447)
T KOG0259|consen 353 --PCLTCPVKPEGCMYLMVKLNLS-----LFPDIED-DVDFCQKLAREESVICLPGQAFGLKNWLRIV--ITVEEEMLEE 422 (447)
T ss_pred --CCcccCcCCCcceEEEeccchh-----hhccccc-cHHHHHHHhhhcceEEeccccccCCCeEEEE--EccChHHHHH
Confidence 5444 5677777653 222111 1111111 22355555 56778887762 789999 8899999999
Q ss_pred HHHHHHHHHHHHH
Q 013204 425 LISKYGKALKATE 437 (447)
Q Consensus 425 ~~~~l~~~l~~~~ 437 (447)
+.+||++...+-.
T Consensus 423 a~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 423 AFSRIKEFCDRHS 435 (447)
T ss_pred HHHHHHHHHHhhh
Confidence 9999999987654
No 228
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.82 E-value=1.7e-17 Score=162.23 Aligned_cols=323 Identities=14% Similarity=0.166 Sum_probs=191.9
Q ss_pred CCHHHHHHHHHHHhcCCcccccCcC-----CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCC
Q 013204 50 SEPRLVAAATAQLNTLPFYHSFWNR-----TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR 124 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~ 124 (447)
.++.+.+++.+.+.+.......... ......++.+.+++++.....++++|++|+++++..++....
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~-------- 83 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLL-------- 83 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhcc--------
Confidence 4678999998888763211000000 124566788888888743334589999999999998887642
Q ss_pred CCcceEEEEcCCCccchhhh--h-cccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhC
Q 013204 125 PNKKKFIARQKSYHGSTLIA--A-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG 201 (447)
Q Consensus 125 ~~~~~vi~~~~~yhg~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~ 201 (447)
..++.|++....|+...... + ...|... ..++....+ ..+.+++++.+.
T Consensus 84 ~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~-------------~~d~~~l~~~~~--- 135 (376)
T TIGR01977 84 KEGDHVITTPMEHNSVARPLECLKEQIGVEI------------TIVKCDNEG-------------LISPERIKRAIK--- 135 (376)
T ss_pred CCCCEEEECcchhhHHHHHHHHHHHHcCcEE------------EEEecCCCC-------------CcCHHHHHHhcC---
Confidence 23467777666654432111 1 1111111 111111000 011366776663
Q ss_pred CCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCCCcc
Q 013204 202 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAY 279 (447)
Q Consensus 202 ~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~gg~ 279 (447)
+++++|+++.+++.+|.+.+ +++|.++|++||+++|+|++++ +|... +... ...+|++++| |.++++
T Consensus 136 -~~~~~v~~~~~~n~tG~~~~----~~~i~~l~~~~~~~livD~a~~-~g~~~--~~~~--~~~~D~~~~s~~K~l~~p- 204 (376)
T TIGR01977 136 -TNTKLIVVSHASNVTGTILP----IEEIGELAQENGIFFILDAAQT-AGVIP--IDMT--ELAIDMLAFTGHKGLLGP- 204 (376)
T ss_pred -CCCeEEEEECCCCCccccCC----HHHHHHHHHHcCCEEEEEhhhc-cCccC--CCch--hcCCCEEEecccccccCC-
Confidence 24567777777777887777 8999999999999999999997 54432 2222 2347887665 988875
Q ss_pred cceeEEEeChhH-HHHhhhccCCCCc--cC-------cCCCCCCcHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHH
Q 013204 280 MPIGAILVSPEV-SEVIHSQSNTLGS--FS-------HGFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQD 346 (447)
Q Consensus 280 ~~~g~~~~~~~~-~~~~~~~~~~~~~--~~-------~~~t~~~~~~~~~aa~a~l~~~~~~---~~~~~~~~~~~~l~~ 346 (447)
.+.|+++.+++. +..+......... +. .....+.+...+.+..++++.+.+. ...++.+++.+++++
T Consensus 205 ~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~ 284 (376)
T TIGR01977 205 QGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLN 284 (376)
T ss_pred CCceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 467777776653 2221110000000 00 0011134455666666778876653 356777778888888
Q ss_pred hHhhccCCCceee--EeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHc-CceEEee---------------CCE
Q 013204 347 GVKAFSDSPIIGE--IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS---------------GDN 408 (447)
Q Consensus 347 ~L~~l~~~~~~~~--~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~---------------g~~ 408 (447)
.|+++....+... ....+.++.+.+.... ...+.+.|.++ ||.+..+ .+.
T Consensus 285 ~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~ 352 (376)
T TIGR01977 285 GLREINKVKIYGPADPANRVGVVSFTVEGID------------SEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGT 352 (376)
T ss_pred HHhcCCCeEEeCCCCccccCCeEEEEECCCC------------HHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCe
Confidence 8876532222211 1112345555543211 34578888887 8887642 256
Q ss_pred EEEecCCCCCHHHHHHHHHHHHH
Q 013204 409 IMMSPPFIMSPEEVDELISKYGK 431 (447)
Q Consensus 409 iR~~~~~~~t~e~i~~~~~~l~~ 431 (447)
+|++++..+|++||++++++|++
T Consensus 353 iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 353 IRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred EEEecCCCCCHHHHHHHHHHHhh
Confidence 99999999999999999999975
No 229
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=9.7e-19 Score=159.22 Aligned_cols=355 Identities=19% Similarity=0.195 Sum_probs=237.3
Q ss_pred eEEEEecCcEEEeCCCCEEEecCCccccccCCC-CCHHHHHHHHHHHhcCCcc---cccCcCCChHHHHHHHHHHHhcCc
Q 013204 17 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTA 92 (447)
Q Consensus 17 ~~~~~~~g~~~~d~dg~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~ 92 (447)
.++.+.-+..++ +||+.+++|.|. |.||. .++++.+.+...+.+++.+ .+.|.++-+.+.++++.+++.+
T Consensus 79 ~v~e~~~~~~~~-i~G~~~~N~aS~---NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~-- 152 (467)
T KOG1358|consen 79 PVLESVMLPHVT-IDGKDVLNFASA---NFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM-- 152 (467)
T ss_pred cccccccCCceE-ecCceeecccch---hhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh--
Confidence 447777778777 899999999877 55554 6899999999999886433 3345678889999999999997
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCc
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
+.++.++.+-|-.+++.++.+.. ++..|++.+-.-+-...-++.++.+..
T Consensus 153 -G~E~aivYs~gF~ti~S~ipafs---------KrGDIi~~de~~nfaIq~GlqlSRS~i-------------------- 202 (467)
T KOG1358|consen 153 -GTEDAIVYSYGFSTIESAIPAFS---------KRGDIIFVDEAVNFAIQKGLQLSRSTI-------------------- 202 (467)
T ss_pred -CCcceeeeccccchhhhcchhhh---------ccCcEEEEehhhhHHHHHHHhhhhhee--------------------
Confidence 55556667778889998888663 345666665544333333333332211
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHhhC------C---CcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEE
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILKEG------P---ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 243 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~------~---~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~ 243 (447)
..|.+++++++|+++.... + .....|++|.++-+.|.++| +.+|.++..+|...+|.
T Consensus 203 ----------~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p----l~~iv~lk~Kyk~Rvil 268 (467)
T KOG1358|consen 203 ----------SYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP----LPEIVKLKNKYKFRVIL 268 (467)
T ss_pred ----------EEecCCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc----cHHHHHHHhhheEEEEE
Confidence 1244555677777653211 1 22568999999999999999 99999999999999999
Q ss_pred ehhhcCCCcccc--ccccccCCCC---CCeeeec--ccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHH
Q 013204 244 DEVICAFGRLGT--MFGCDKYSIK---PDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPV 316 (447)
Q Consensus 244 DEv~~g~g~~g~--~~~~~~~~~~---~d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 316 (447)
||..+ ||..|. .+..+++++. .|+++.| -+++.++ |+.+++.-+.+ ... ..+.....+.+..|+
T Consensus 269 dEs~S-fG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G---gFc~G~~~i~~-hQr----LSg~~Y~fSAslPp~ 339 (467)
T KOG1358|consen 269 DESLS-FGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG---GFCAGKSFIAD-HQR----LSGSGYCFSASLPPY 339 (467)
T ss_pred ecccc-cccccccCccccccCCCCccceeeeeecccccccccC---ceeecceeeEe-eee----ccccceeeeccCchh
Confidence 99998 766665 4567888875 4677655 3555433 45556444322 211 111122234455677
Q ss_pred HHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHH
Q 013204 317 SCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC 395 (447)
Q Consensus 317 ~~~aa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 395 (447)
...+|..+++++++ ++..+.++.....+...|+.... +.......+.+..+.+.....+ ...+.++.+.+...+
T Consensus 340 la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s~--~~v~~~~~SPi~hl~l~~~~~s---~e~e~~lL~eivd~~ 414 (467)
T KOG1358|consen 340 LAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNSG--FIVSGSPESPIIHLQLERSYGS---REKEEKLLEEIVDKC 414 (467)
T ss_pred hhhhHHHHHHHHhhCcchhhhhhccccccchhhhcCCc--eEEecCcCCceeeeeecccccc---hHHHHHHHHHHHHHH
Confidence 77888888887764 45666777777777777765321 2222233455556666543322 122334556677777
Q ss_pred HHcCceEEee-----------CCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 396 EKHGMLVRVS-----------GDNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 396 ~~~Gi~~~~~-----------g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
+.+|+++... ...+|++....+++|||+++.+.++++...
T Consensus 415 i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 415 IAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred HhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 7778887643 247999999999999999999999988765
No 230
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.82 E-value=2.3e-17 Score=161.99 Aligned_cols=305 Identities=13% Similarity=0.093 Sum_probs=191.9
Q ss_pred hHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhh-cccCCccccC
Q 013204 77 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA-SLSGLPALHQ 155 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~-~~~~~~~~~~ 155 (447)
+...++.+.+.+++.....+.+++++||+++++.++.... .++++|++.++.|++.....+ ...|...
T Consensus 42 ~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~--------~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v--- 110 (401)
T PLN02409 42 ALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTL--------SPGDKVVSFRIGQFSLLWIDQMQRLNFDV--- 110 (401)
T ss_pred HHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcC--------CCCCEEEEeCCCchhHHHHHHHHHcCCce---
Confidence 4555677777777643333578999999999999987653 345789998888876542211 1112111
Q ss_pred CCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHH--
Q 013204 156 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV-- 233 (447)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l-- 233 (447)
..++.+.. .. .+.+++++.+......++++|++..+.+.+|.+.+ +++|.++
T Consensus 111 ---------~~v~~~~~-------~~------~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~----~~~i~~l~~ 164 (401)
T PLN02409 111 ---------DVVESPWG-------QG------ADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND----LAGVRKLLD 164 (401)
T ss_pred ---------EEEECCCC-------CC------CCHHHHHHHHhhCcCCCccEEEEEeecccccccCC----HHHHHHHHh
Confidence 11111100 00 01377887776421124667777777667777776 8888888
Q ss_pred HHhcCCEEEEehhhcCCCccccccccccCCCCCCeeee--cccCCCcccceeEEEeChhHHHHhhhccCCCCcc------
Q 013204 234 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF------ 305 (447)
Q Consensus 234 ~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~--sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~------ 305 (447)
|+++|+++|+|++++ +|.. . ++...+..|++++ +|+++++ .++|+++.+++.++.+.........+
T Consensus 165 ~~~~g~~~vvD~v~s-~g~~--~--id~~~~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
T PLN02409 165 CAQHPALLLVDGVSS-IGAL--D--FRMDEWGVDVALTGSQKALSLP-TGLGIVCASPKALEASKTAKSPRVFFDWADYL 238 (401)
T ss_pred hhccCcEEEEEcccc-cCCc--c--ccccccCccEEEEcCccccCcC-CCcceeEECHHHHHHHhcCCCCCeecCHHHHH
Confidence 999999999999987 5322 2 2222334677754 5999887 58999999999888775421110000
Q ss_pred --CcCC---CCCCcHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHhHhhccCCCceeeE--eeeeeEEEEEeecCC
Q 013204 306 --SHGF---TYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI--RGTGLILGTEFADNK 375 (447)
Q Consensus 306 --~~~~---t~~~~~~~~~aa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~--~~~g~~~~i~~~~~~ 375 (447)
...+ .++++...+.+..++++.+.+ ++..++.+++.+++++.|+++ +..++... ...+.+..+.++...
T Consensus 239 ~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~p~~~ 317 (401)
T PLN02409 239 KFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVVPEGI 317 (401)
T ss_pred HHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeCCCCC
Confidence 0011 335555667777788887654 345677778888888888766 33222211 112233344443221
Q ss_pred CCCCCCCCCcchHHHHHHHHH-HcCceEEee-----CCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 376 SPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-----GDNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-----g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
....+.+.+. +.|+.+..+ ++.+|+++...++++++..++++|++++.++
T Consensus 318 -----------~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 318 -----------DSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred -----------CHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 1334665654 669988854 4679999999999999999999999999865
No 231
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.81 E-value=7.5e-17 Score=157.17 Aligned_cols=304 Identities=14% Similarity=0.152 Sum_probs=186.0
Q ss_pred hHHHHHHHHHHHhcCcCC-CCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchh-hhhcccCCcccc
Q 013204 77 KPSLDLAKELLEMFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL-IAASLSGLPALH 154 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~-~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~-~~~~~~~~~~~~ 154 (447)
+...++.+.+++++...+ .+.+++++||+++++.++..+. ..++++++..++|.+... ......|...
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~--------~~~~~vlv~~~~~~~~~~~~~~~~~g~~~-- 106 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV--------PRDGKVLVPDNGAYGARIAQIAEYLGIAH-- 106 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc--------CCCCeEEEEeCCchHHHHHHHHHHcCCcE--
Confidence 466778888888874322 3568899999999999998763 234677777777766532 1111112111
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
..++.+..+. .+.+++++.+... .++.+|.+..+++..|...| +++|.++|
T Consensus 107 ----------~~i~~~~~~~-------------~d~~~l~~~l~~~--~~~~~v~~~~~~~~tG~~~~----~~~i~~l~ 157 (368)
T PRK13479 107 ----------VVLDTGEDEP-------------PDAAEVEAALAAD--PRITHVALVHCETTTGILNP----LDEIAAVA 157 (368)
T ss_pred ----------EEEECCCCCC-------------CCHHHHHHHHHhC--CCCcEEEEEcccCccccccC----HHHHHHHH
Confidence 1122111000 0137777776532 23445555555566677776 89999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccceeEEEeChhHHHHhhhccCCCCcc-------
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF------- 305 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~------- 305 (447)
+++|+++|+|++++ +|.. .. ......+|+++ ++|.+.|+ .++|++++++++++.+...... ..+
T Consensus 158 ~~~~~~livDa~~~-~g~~--~~--~~~~~~~d~~v~s~~K~l~g~-~G~G~l~~~~~~~~~~~~~~~~-~~~~~~~~~~ 230 (368)
T PRK13479 158 KRHGKRLIVDAMSS-FGAI--PI--DIAELGIDALISSANKCIEGV-PGFGFVIARRSELEACKGNSRS-LSLDLYDQWA 230 (368)
T ss_pred HHcCCEEEEEcccc-cCCc--cc--cccccCceEEEecCccccccC-CCceEEEECHHHHHHhhcCCCC-eeecHHHHHh
Confidence 99999999998774 6532 22 22223467765 46988776 5789999999988877532110 000
Q ss_pred ----CcCCCCCCcHHHHHHHHHHHHHHhh----hcHHHHHHHHHHHHHHhHhhccCCCceee-EeeeeeEEEEEeecCCC
Q 013204 306 ----SHGFTYSGHPVSCAVAIEALKIYKE----RNIVEQVNKIAPKFQDGVKAFSDSPIIGE-IRGTGLILGTEFADNKS 376 (447)
Q Consensus 306 ----~~~~t~~~~~~~~~aa~a~l~~~~~----~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-~~~~g~~~~i~~~~~~~ 376 (447)
.....++.+..++++..++++.+.+ ++..+++.++.+++++.|+++ +...+.. .........+.+.....
T Consensus 231 ~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 309 (368)
T PRK13479 231 YMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHAPADPA 309 (368)
T ss_pred hhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEECCCCCC
Confidence 0111245566666666677776543 234567777778888888776 2222111 00111223333332210
Q ss_pred CCCCCCCCcchHHHHHHHHHHcCceEEeeC----CEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 377 PNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----DNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g----~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
. ....+.+.|.++||+++++. +.+|++....++++++++++++|+++++++
T Consensus 310 ~---------~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 310 Y---------DFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred c---------CHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 0 13468889999999998752 479999766789999999999999988754
No 232
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.81 E-value=7.7e-17 Score=157.45 Aligned_cols=322 Identities=17% Similarity=0.140 Sum_probs=190.1
Q ss_pred CCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcce
Q 013204 50 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 129 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~ 129 (447)
.+|.+.+++..................+...++.+.+++++. .+.+.+++++||++++..++..++.... .+ .+++.
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g-~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~-~~g~~ 108 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLH-LPDAYGYIVSGGTEANIQAVRAAKNLAR-EE-KRTPN 108 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhC-CCCCCeEEeccHHHHHHHHHHHHHHHHh-cc-CCCcE
Confidence 577878888777544211111112233445678888888873 3445778899999999998876542210 01 12356
Q ss_pred EEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 013204 130 FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFI 209 (447)
Q Consensus 130 vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi 209 (447)
|++.+++|..+.. .....|... ..++....+ ..+++++++.+.. +++++++
T Consensus 109 vl~~~~~h~~~~~-~~~~~G~~~------------~~v~~~~~~-------------~~d~~~l~~~l~~---~~~~vv~ 159 (373)
T TIGR03812 109 IIVPESAHFSFEK-AAEMLGLEL------------RYAPLDEDY-------------TVDVKDVEDLIDD---NTIGIVG 159 (373)
T ss_pred EEECCcchHHHHH-HHHHcCCeE------------EEEeeCCCC-------------CcCHHHHHHHHhh---CcEEEEE
Confidence 7777766654332 222222211 111211110 0114677777652 3455666
Q ss_pred EccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccc---c---ccccCCCCCCeeeec--ccCCCcccc
Q 013204 210 AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM---F---GCDKYSIKPDLVSFA--KALSSAYMP 281 (447)
Q Consensus 210 ~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~---~---~~~~~~~~~d~v~~s--K~l~gg~~~ 281 (447)
+.|. +..|.+.+ +++|.++|++||+++|+|++|.++ ..+.. . .....-...|.++++ |...++ .|
T Consensus 160 ~~~~-~~tG~~~~----~~~i~~l~~~~~~~livD~a~~~~-~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~-~~ 232 (373)
T TIGR03812 160 IAGT-TELGQIDD----IEELSKIALENGIYLHVDAAFGGF-VIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSP-IP 232 (373)
T ss_pred ECCC-CCCCccCC----HHHHHHHHHHcCCeEEEEcCchhH-HHHHHhcCCCCCCccccCCCCCEEEECccccCCCc-CC
Confidence 7764 55677766 999999999999999999999744 21100 0 011110124666554 632233 57
Q ss_pred eeEEE-eChhHHHHhhhccCCCCccCcCC-----CCCCcHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHhHhhcc
Q 013204 282 IGAIL-VSPEVSEVIHSQSNTLGSFSHGF-----TYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFS 352 (447)
Q Consensus 282 ~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-----t~~~~~~~~~aa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~l~ 352 (447)
.|+++ .++++.+.+.... .+.... ..+.++.+++++.++++.+.++ +..++..++.+++++.|+++
T Consensus 233 ~G~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~- 307 (373)
T TIGR03812 233 AGGILFRSKSYLKYLSVDA----PYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI- 307 (373)
T ss_pred ceEEEEeCHHHHhhhcccC----cccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 77555 5777777664211 111110 1234456677777888876543 35678888888999888876
Q ss_pred CCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee--CCEEEEecCCCCCHHHHHHHHHHHH
Q 013204 353 DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--GDNIMMSPPFIMSPEEVDELISKYG 430 (447)
Q Consensus 353 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--g~~iR~~~~~~~t~e~i~~~~~~l~ 430 (447)
+...+ ..+...++.+.+.+ ...+.++|.++||+++.. ...+|++++..+|++|+++++++|+
T Consensus 308 g~~~~--~~~~~~~v~~~~~~--------------~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~ 371 (373)
T TIGR03812 308 GFEPV--IEPVLNIVAFEVDD--------------PEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLK 371 (373)
T ss_pred CCeEE--cCCCceEEEEEeCC--------------HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHh
Confidence 22111 12233344443321 235788899999999876 3579999999999999999999997
Q ss_pred H
Q 013204 431 K 431 (447)
Q Consensus 431 ~ 431 (447)
+
T Consensus 372 ~ 372 (373)
T TIGR03812 372 E 372 (373)
T ss_pred h
Confidence 5
No 233
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.81 E-value=1.2e-16 Score=154.48 Aligned_cols=328 Identities=14% Similarity=0.107 Sum_probs=188.2
Q ss_pred CEEEecCCccccccCCC--CCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHH
Q 013204 33 KKYLDSLAGLWCTALGG--SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 110 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~ 110 (447)
+.+|+..+.+ +.||- .+++++++|.++.+++ ....+...++++++++++ +.+++++++|+++|+..
T Consensus 8 ~~~ina~g~~--t~~g~s~~~~~v~~a~~~~~~~~-------~~~~~~~~~~~~~~a~~~---g~~~~~~~~g~t~al~~ 75 (363)
T TIGR01437 8 KKVINASGKM--TILGVSTVSDEVADAQKRGAQNY-------FEIKELVNKTGEYIANLL---GVEDAVIVSSASAGIAQ 75 (363)
T ss_pred ceEEECCcEe--ecCCCCCCCHHHHHHHHHHHhcC-------CCHHHHHHHHHHHHHHhh---CCCeEEEEcCHHHHHHH
Confidence 4567765554 66775 4899999999997653 124566778888888886 44589999999999999
Q ss_pred HHHHHHHHHHhcCC-----------CCcceEEEEcCCCccc---hhhhhcccCCccccCCCCCCCCcceecCCCCcccCC
Q 013204 111 QVKLVWYYNNALGR-----------PNKKKFIARQKSYHGS---TLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYA 176 (447)
Q Consensus 111 Al~~~~~~~~~~~~-----------~~~~~vi~~~~~yhg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (447)
+++.+... |+ -.++.||+..+.|..+ ....+...|... ..+++..
T Consensus 76 al~al~~~----Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~------------v~v~~~~----- 134 (363)
T TIGR01437 76 SVAAVITR----GNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKV------------VEAGYAN----- 134 (363)
T ss_pred HHHHHhcC----CCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeE------------EEEcCCC-----
Confidence 99976411 11 0124677776555432 112222222111 1111100
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccc
Q 013204 177 HPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM 256 (447)
Q Consensus 177 ~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~ 256 (447)
..+++++++.+. +++.++++++...+..|.+.+ +++|.++|++||+++|+|++|+ . ...
T Consensus 135 ----------~~d~~~le~ai~---~~t~ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~-~--~~~- 193 (363)
T TIGR01437 135 ----------ECSAEQLEAAIT---EKTAAILYIKSHHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAE-E--DLQ- 193 (363)
T ss_pred ----------CCCHHHHHHhcC---hhceEEEEEecCCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCC-C--chH-
Confidence 011377888775 333334435443334455555 8999999999999999999996 2 110
Q ss_pred cccccCCCCCCeeeec--ccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh--hc
Q 013204 257 FGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RN 332 (447)
Q Consensus 257 ~~~~~~~~~~d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~--~~ 332 (447)
....++ .|++++| |.|+| +..|++++++++++.+.......+ ..+.....++++..++++.+.+ .+
T Consensus 194 -~~~~~g--~D~~~~S~~K~l~g--p~~G~l~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~gl~aAl~~~~~~~~~ 263 (363)
T TIGR01437 194 -KYYRLG--ADLVIYSGAKAIEG--PTSGLVLGKKKYIEWVKLQSKGIG-----RAMKVGKENILGLTAALEQYLSTGKE 263 (363)
T ss_pred -HHHHcC--CCEEEEeCCcccCC--CceEEEEEcHHHHHHHHhccCCCc-----ceeccCHHHHHHHHHHHHHHHccCcc
Confidence 011123 5888765 88876 468998888888776642111000 0111111223333445554432 23
Q ss_pred HHHHHHHHHHHHHHhHhhccCCCceeeEeeeee---EEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcC--ceEEe---
Q 013204 333 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL---ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG--MLVRV--- 404 (447)
Q Consensus 333 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--i~~~~--- 404 (447)
..+...++.+++++.|+++++..........+. ...+.+...... .....+.+.|.++| |.+++
T Consensus 264 ~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g--------~~~~~l~~~L~~~~~~I~~r~~~~ 335 (363)
T TIGR01437 264 SGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELG--------MTAADVVQALRQGEPAIYTRGYKA 335 (363)
T ss_pred cHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCC--------CCHHHHHHHHhcCCCCEEEeeeee
Confidence 344444556678888877643222211111111 112333321000 01456888888777 66664
Q ss_pred eCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 405 SGDNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 405 ~g~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
..+.+|+.|.. .+++|++.++++|++.+
T Consensus 336 ~~~~~~l~~~~-~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 336 NEGIIEIDPRS-VTGGQLDIIVERIREIV 363 (363)
T ss_pred cCCeEEEEeec-CCHHHHHHHHHHHHHhC
Confidence 13569999884 67999999999998753
No 234
>PRK07908 hypothetical protein; Provisional
Probab=99.81 E-value=8.2e-17 Score=155.62 Aligned_cols=312 Identities=14% Similarity=0.154 Sum_probs=185.8
Q ss_pred CCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHH
Q 013204 32 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 111 (447)
Q Consensus 32 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~A 111 (447)
+..++||+.+. ++++ .++.+++++.+.+.....+ + +.....++.+.+++.+ ..+++++++++|+++|+..+
T Consensus 21 ~~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y-~----~~~g~~~lr~aia~~~-~~~~~~I~it~Ga~~al~~~ 91 (349)
T PRK07908 21 GPGLLDFAVNV--RHDT-PPEWLRERLAARLGDLAAY-P----STEDERRARAAVAARH-GRTPDEVLLLAGAAEGFALL 91 (349)
T ss_pred CCCeEEecCCC--CCCC-CCHHHHHHHHHHhhHhhcC-C----CccchHHHHHHHHHHh-CcChhhEEECCCHHHHHHHH
Confidence 67899998764 4455 5788999999887553222 1 2234566777888776 35778999999999999887
Q ss_pred HHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHH
Q 013204 112 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191 (447)
Q Consensus 112 l~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (447)
++ + .+ .++++..|+|......... .|.... .++....+. .+ .+
T Consensus 92 ~~-l---------~~-~~viv~~P~y~~~~~~~~~-~G~~i~------------~v~~~~~~~-----~d--------~~ 134 (349)
T PRK07908 92 AR-L---------RP-RRAAVVHPSFTEPEAALRA-AGIPVH------------RVVLDPPFR-----LD--------PA 134 (349)
T ss_pred Hh-c---------CC-CeEEEeCCCChHHHHHHHH-cCCEEE------------eeccCcccC-----cC--------hh
Confidence 76 3 22 4567788999776533322 222111 111110000 00 12
Q ss_pred HHHHHHHhhCCCcEEEEEE-ccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee-
Q 013204 192 NLEDLILKEGPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV- 269 (447)
Q Consensus 192 ~le~~l~~~~~~~~a~vi~-epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v- 269 (447)
.+ . ++++++++ .|.|+ +|.+.+ .++|.++|++ +.++|+||+|..+ ..+......... .++++
T Consensus 135 ~l----~----~~~~~i~l~np~NP-TG~~~~----~~~l~~l~~~-~~~iIvDe~y~~~-~~~~~~~l~~~~-~~~~i~ 198 (349)
T PRK07908 135 AV----P----DDADLVVIGNPTNP-TSVLHP----AEQLLALRRP-GRILVVDEAFADA-VPGEPESLAGDD-LPGVLV 198 (349)
T ss_pred Hh----c----cCCCEEEEcCCCCC-CCCCcC----HHHHHHHHhc-CCEEEEECcchhh-ccCCcccccccc-CCCEEE
Confidence 11 1 12334444 55544 455554 4567778864 7889999999876 233221211111 13433
Q ss_pred --eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHH--H-hhhcHHHHHHHHHHHH
Q 013204 270 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI--Y-KERNIVEQVNKIAPKF 344 (447)
Q Consensus 270 --~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~--~-~~~~~~~~~~~~~~~l 344 (447)
+|||.++-+++++|++++++++++.+... . ..+..+++.++++.+.++- . .-++..++++++.+++
T Consensus 199 i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l 269 (349)
T PRK07908 199 LRSLTKTWSLAGLRVGYALGAPDVLARLTRG-------R--AHWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEM 269 (349)
T ss_pred EeecccccCCccceeeeeecCHHHHHHHHhc-------C--CCCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 57998873338999999999998888632 1 1233445555444333320 0 0123345556666666
Q ss_pred HHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-------CCEEEEecCCCC
Q 013204 345 QDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMSPPFIM 417 (447)
Q Consensus 345 ~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------g~~iR~~~~~~~ 417 (447)
.+.|+++ .+.......|.++.+.+.+ ...+.+.|.++||.+.++ .+.+|++. .
T Consensus 270 ~~~L~~~---~~~~~~p~~g~~~~~~~~~--------------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~---~ 329 (349)
T PRK07908 270 VAGLRAV---GARVVDPAAAPFVLVRVPD--------------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV---R 329 (349)
T ss_pred HHHHHhC---CcEeccCCCceEEEEECCc--------------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe---C
Confidence 6666654 2211112346677776542 234778888999999874 25699994 5
Q ss_pred CHHHHHHHHHHHHHHHH
Q 013204 418 SPEEVDELISKYGKALK 434 (447)
Q Consensus 418 t~e~i~~~~~~l~~~l~ 434 (447)
+++++++++++|++.+.
T Consensus 330 ~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 330 PRAEVPVLVQALAEILK 346 (349)
T ss_pred CCccHHHHHHHHHHHHh
Confidence 88899999999988754
No 235
>PLN02651 cysteine desulfurase
Probab=99.80 E-value=2.8e-17 Score=159.69 Aligned_cols=321 Identities=17% Similarity=0.166 Sum_probs=187.5
Q ss_pred EEecCCccccccCCCCCHHHHHHHHHHHhcCCcc-cc----cCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHH
Q 013204 35 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HS----FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 109 (447)
Q Consensus 35 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~----~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~ 109 (447)
|||..+. +.-++++.+++.+.+...... +. ......+...++.+.+++++. .+.+.++|++|+++++.
T Consensus 2 Yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g-~~~~~v~~t~~~t~a~~ 74 (364)
T PLN02651 2 YLDMQAT------TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIG-ADPKEIIFTSGATESNN 74 (364)
T ss_pred cccCcCC------CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEeCCHHHHHH
Confidence 6665433 346899999998887542111 10 000012335567778888763 45678999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh--hcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA--ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
.++..+.... . .++++|++....|+...... +...+.. +..++....+.
T Consensus 75 ~~l~~~~~~~---~-~~g~~vl~~~~~h~s~~~~~~~~~~~g~~------------v~~v~~~~~~~------------- 125 (364)
T PLN02651 75 LAIKGVMHFY---K-DKKKHVITTQTEHKCVLDSCRHLQQEGFE------------VTYLPVKSDGL------------- 125 (364)
T ss_pred HHHHHHHHhc---c-CCCCEEEEcccccHHHHHHHHHHHhcCCE------------EEEEccCCCCc-------------
Confidence 9998664221 1 22356666554443322111 1111111 11122211000
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCC
Q 013204 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD 267 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d 267 (447)
.+.+++++.+. ++++++++..+++..|.+.| +++|.++|++||+++++|.+|+ +|.. . ++...+.+|
T Consensus 126 ~d~~~l~~~i~----~~t~lv~v~~~~n~tG~~~~----l~~I~~~~~~~g~~~~vD~a~~-~g~~--~--~~~~~~~~D 192 (364)
T PLN02651 126 VDLDELAAAIR----PDTALVSVMAVNNEIGVIQP----VEEIGELCREKKVLFHTDAAQA-VGKI--P--VDVDDLGVD 192 (364)
T ss_pred CCHHHHHHhcC----CCcEEEEEECCCCCceeccc----HHHHHHHHHHcCCEEEEEcchh-hCCc--c--cCcccCCCC
Confidence 01367777664 34678888888888888887 9999999999999999999997 4432 2 222334579
Q ss_pred eeeec--ccCCCcccceeEEEeChhHHHHhhhccC---CCCccCcCCCCCCcHHHHHHHHHHHHHHhh--hcHHHHHHHH
Q 013204 268 LVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSN---TLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKI 340 (447)
Q Consensus 268 ~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~--~~~~~~~~~~ 340 (447)
++++| | +.|+ .++|+++.+++....+..... ....+. ..+.+..++.+..++|+.+.+ ++..++.+++
T Consensus 193 ~~~~s~hK-~~gp-~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~---~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l 267 (364)
T PLN02651 193 LMSISGHK-IYGP-KGVGALYVRRRPRVRLEPLMSGGGQERGRR---SGTENTPLVVGLGAACELAMKEMDYDEKHMKAL 267 (364)
T ss_pred EEEechhh-hCCC-CceEEEEEcCCCCCCCCccccCCCccCCcc---CCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99876 7 5554 579999999876554432100 000111 234555666666777776653 3345677777
Q ss_pred HHHHHHhHhh-ccCCCceeeE---eeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-----------
Q 013204 341 APKFQDGVKA-FSDSPIIGEI---RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------- 405 (447)
Q Consensus 341 ~~~l~~~L~~-l~~~~~~~~~---~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------- 405 (447)
.+++++.|++ +++..+.... .....++.+.+.... ...+.+.|.+ |.++.+
T Consensus 268 ~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~------------~~~~~~~L~~--i~v~~g~~c~~~~~~~~ 333 (364)
T PLN02651 268 RERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVE------------GESLLMGLKE--VAVSSGSACTSASLEPS 333 (364)
T ss_pred HHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCC------------HHHHHHHhCC--EEEEchhhcCCCCCCcC
Confidence 7777777764 3332222211 112334555543211 3446666643 555422
Q ss_pred -------------CCEEEEecCCCCCHHHHH
Q 013204 406 -------------GDNIMMSPPFIMSPEEVD 423 (447)
Q Consensus 406 -------------g~~iR~~~~~~~t~e~i~ 423 (447)
.+.+|+|++..+|++|||
T Consensus 334 ~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 334 YVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred HHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 146999999999999985
No 236
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=4.8e-17 Score=156.17 Aligned_cols=310 Identities=17% Similarity=0.215 Sum_probs=184.9
Q ss_pred CCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHH
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 110 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~ 110 (447)
++..++||..+. ++++ .+|.+.+++.+.+...... ..+.....++.+.+++++. .+.+++++++|+++++..
T Consensus 16 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~----~Y~~~g~~~lr~~ia~~~~-~~~~~I~~t~G~~~~l~~ 87 (337)
T PRK03967 16 EGNYRIWLDKNE--NPFD-LPEELKEEIFEELKRVPFN----RYPHITSDPLREAIAEFYG-LDAENIAVGNGSDELISY 87 (337)
T ss_pred CCCceEEecCCC--CCCC-CCHHHHHHHHHHhhcCccc----cCCCCCHHHHHHHHHHHhC-cCcceEEEcCCHHHHHHH
Confidence 455678887764 4565 5789999998887532111 1123345678888888874 567899999999999877
Q ss_pred HHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHH
Q 013204 111 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190 (447)
Q Consensus 111 Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (447)
+++.. + ++.|++.+|.|..+...... .|... ..++..+.+. .++
T Consensus 88 ~~~~~---------~-gd~V~v~~P~y~~~~~~~~~-~g~~~------------~~v~~~~~~~-------------~d~ 131 (337)
T PRK03967 88 LVKLF---------E-GKHIVITPPTFGMYSFYAKL-NGIPV------------IDVPLKEDFT-------------IDG 131 (337)
T ss_pred HHHHh---------C-CCeEEEeCCChHHHHHHHHH-cCCeE------------EEeecCCCCC-------------cCH
Confidence 66543 2 36899999999765433222 22111 1111111000 012
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee-
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV- 269 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v- 269 (447)
+++++.. ++....+++.|.|++| .+. + .++|.++++ +++++|+||+|.+|. +... .......++++
T Consensus 132 ~~l~~~~----~~~~~v~~~~P~NPtG-~~~-~---~~~l~~i~~-~~~~ii~De~y~~~~--~~~~-~~~~~~~~~vi~ 198 (337)
T PRK03967 132 ERIAEKA----KNASAVFICSPNNPTG-NLQ-P---EEEILKVLE-TGKPVVLDEAYAEFS--GKSL-IGLIDEYPNLIL 198 (337)
T ss_pred HHHHHhc----cCCCEEEEeCCCCCCC-CCC-C---HHHHHHHHh-cCCEEEEECchhhhc--ccch-HHHHhhCCCEEE
Confidence 4555433 2233455666755555 444 4 456666674 799999999998773 2111 11111123443
Q ss_pred --eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHH
Q 013204 270 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQD 346 (447)
Q Consensus 270 --~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~~~~~~~~~~~~l~~ 346 (447)
+|||.++.+++++|++++++++++.+... . ..++.+.+++.++.++++..+. .+......+.++.+.+
T Consensus 199 l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~-------~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 269 (337)
T PRK03967 199 LRTFSKAFGLAGIRAGYAIANEEIIDALYRI-------K--PPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRR 269 (337)
T ss_pred EecchHhhcchhhhheeeecCHHHHHHHHhh-------c--CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 58999984349999999999998888632 1 2345567777777777752111 1122333334444444
Q ss_pred hHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC----CEEEEecCCCCCHHHH
Q 013204 347 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----DNIMMSPPFIMSPEEV 422 (447)
Q Consensus 347 ~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g----~~iR~~~~~~~t~e~i 422 (447)
.|.+. . ..+.+.++.+.+. +.+.|+++||.+.+.+ +.+|++ ..+.++.
T Consensus 270 ~L~~~---~----~~~~~~~~~~~~~------------------~~~~l~~~gi~v~~~~~~~~~~~Ri~---~~~~~~~ 321 (337)
T PRK03967 270 ELGEY---A----YPSDANFLLLKLD------------------AYDYLLENGIVVRKLSGRLEGHIRVT---VGKREEN 321 (337)
T ss_pred HhccC---c----CCCCCcEEEEhHH------------------HHHHHHHCCEEEEeCCCCCCCeEEEe---cCCHHHH
Confidence 44432 1 1233455444331 5678889999997653 469999 4477888
Q ss_pred HHHHHHHHHHHH
Q 013204 423 DELISKYGKALK 434 (447)
Q Consensus 423 ~~~~~~l~~~l~ 434 (447)
+++++.|++..+
T Consensus 322 ~~l~~~l~~~~~ 333 (337)
T PRK03967 322 DEFIKALKEIKE 333 (337)
T ss_pred HHHHHHHHHHHH
Confidence 888888877654
No 237
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.80 E-value=6.9e-17 Score=161.18 Aligned_cols=308 Identities=16% Similarity=0.135 Sum_probs=179.6
Q ss_pred hHHHHHHHHHHHhcC---cCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccc
Q 013204 77 KPSLDLAKELLEMFT---ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL 153 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~---~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 153 (447)
+....+++.+.+.+. ..++++|++++|+++++..++.... ..++.|++.+|.|.+.........|...
T Consensus 90 ~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~--------~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~- 160 (468)
T PLN02450 90 AFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLA--------EPGDAFLLPTPYYPGFDRDLKWRTGVEI- 160 (468)
T ss_pred HHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhC--------CCCCEEEECCCCCCchHHHHhhcCCcEE-
Confidence 444445555544322 1367889999999999999888663 3457899999999887543332122211
Q ss_pred cCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhh--CCCcE-EEEEEccccCCCCCccCChhHHHHH
Q 013204 154 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETI-AAFIAEPVIGAGGVIPPPATYFEKV 230 (447)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~-a~vi~epv~~~~G~~~~~~~~l~~l 230 (447)
..+++... +.+. .+.+.+++.+... ...++ ++++++|.|++| .+.+.+.+++|
T Consensus 161 -----------v~v~~~~~----------~~~~-~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG--~~~s~e~l~~l 216 (468)
T PLN02450 161 -----------VPIHCSSS----------NGFQ-ITESALEEAYQQAQKLNLKVKGVLITNPSNPLG--TTTTRTELNLL 216 (468)
T ss_pred -----------EEEecCCc----------cCCc-CCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCC--cccCHHHHHHH
Confidence 11111100 0000 0125566655431 11234 455666766666 55688999999
Q ss_pred HHHHHhcCCEEEEehhhcCCCccccccc--cccC------C--CCCCee---eecccCCCcccceeEEEeChh-HHHHhh
Q 013204 231 QAVVKKYDILFIADEVICAFGRLGTMFG--CDKY------S--IKPDLV---SFAKALSSAYMPIGAILVSPE-VSEVIH 296 (447)
Q Consensus 231 ~~l~~~~g~~li~DEv~~g~g~~g~~~~--~~~~------~--~~~d~v---~~sK~l~gg~~~~g~~~~~~~-~~~~~~ 296 (447)
.++|++|++++|.||+|.++...+..+. .... + ....++ +|||.++.+++++|+++++++ +++.+.
T Consensus 217 l~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~ 296 (468)
T PLN02450 217 VDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAAT 296 (468)
T ss_pred HHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHH
Confidence 9999999999999999997644443221 1111 1 112222 689998743499999999755 556554
Q ss_pred hccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh-----hhcHHHHHHHHHHHHHHhHhhccCCCceeeEeee-eeEEEEE
Q 013204 297 SQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-----ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTE 370 (447)
Q Consensus 297 ~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-----~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~-g~~~~i~ 370 (447)
.. .. ....+.+++.++.+.|+.-. -.+..+.++++.+.+.+.|+++ ++ ...... |.++++.
T Consensus 297 ~~-------~~--~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~---gi-~~~~~~~g~flwi~ 363 (468)
T PLN02450 297 KM-------SS--FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA---GI-KCLKSNAGLFCWVD 363 (468)
T ss_pred HH-------hh--cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc---CC-cccCCCceEEEEEE
Confidence 21 11 11235567776666664211 0122344555555555666554 22 122333 5577777
Q ss_pred eecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeC-------CEEEEecCCC-CCHHHHHHHHHHHHHHHHHHH
Q 013204 371 FADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-------DNIMMSPPFI-MSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g-------~~iR~~~~~~-~t~e~i~~~~~~l~~~l~~~~ 437 (447)
+....... .+ .....+...++ +.||.+.|+. +.+|++ +. .+++++++++++|++++.+..
T Consensus 364 l~~~~~~~-~~----~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~--f~~~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 364 MRHLLKSN-TF----EAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVC--FANMSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred chHhcCcC-Cc----hHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEE--ecCCCHHHHHHHHHHHHHHHHhcc
Confidence 65321110 00 01123555655 5799998762 469999 55 489999999999999997765
No 238
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.80 E-value=1.3e-17 Score=152.34 Aligned_cols=328 Identities=19% Similarity=0.188 Sum_probs=188.4
Q ss_pred EecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHH
Q 013204 36 LDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV 115 (447)
Q Consensus 36 lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~ 115 (447)
+||.|.+++ | .+|+++++|.++-...... .+..+...++++++++++ +...++|++|||.||..||...
T Consensus 2 ~~f~SDn~~---g-~~~~m~eam~~a~~~~~~~----YG~D~~~~~~e~~~ae~~---g~~a~~Fv~sGT~aN~lal~~~ 70 (342)
T COG2008 2 IDFRSDNVA---G-PTPEMREALAAANAVGDDV----YGEDPTTNALEQRIAELF---GKEAALFVPSGTQANQLALAAH 70 (342)
T ss_pred CccccCccC---C-CCHHHHHHHHhccccCCCC----CCCCHHHHHHHHHHHHHh---CCceEEEecCccHHHHHHHHHh
Confidence 578777554 3 6899999999876322211 346778888999999997 4489999999999999999977
Q ss_pred HHHHHhcCCCCcceEEEEcCCCccchh--hhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHH
Q 013204 116 WYYNNALGRPNKKKFIARQKSYHGSTL--IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 193 (447)
Q Consensus 116 ~~~~~~~~~~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 193 (447)
. .+...||+ ...-|-++. ++...-+. ....+ ..+. .-+...++++
T Consensus 71 ~--------~~~~~vi~-~~~aHi~~~E~Ga~~~~~~-----~~~~~-------~~~g------------~~Gklt~e~v 117 (342)
T COG2008 71 C--------QPGESVIC-HETAHIYTDECGAPEFFGG-----GQKLP-------IVPG------------ADGKLTPEDV 117 (342)
T ss_pred c--------CCCCeEEE-eccccceecccCcHHHHcC-----Cceec-------cCCC------------CCCCcCHHHH
Confidence 4 22344444 555665431 11111110 00000 0000 0001114777
Q ss_pred HHHHHhh--CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccc-----cccccCCCCC
Q 013204 194 EDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-----FGCDKYSIKP 266 (447)
Q Consensus 194 e~~l~~~--~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~-----~~~~~~~~~~ 266 (447)
+..+... +...+..++.|...+++| .++|.++|++|.++||+||+.|++|-+ |...- -...-+.--.
T Consensus 118 ~~~i~~~d~~~~~~~~~~~e~~~te~G-tVy~l~el~~i~~~~k~~~l~LHmDGA-----R~~nA~valg~~~~~~~~~~ 191 (342)
T COG2008 118 EAAIRPDDIHHAPTPLAVLENTATEGG-TVYPLDELEAISAVCKEHGLPLHMDGA-----RLANALVALGVALKTIKSYV 191 (342)
T ss_pred HHhhcCCCcccCCCceEEEeeccCCCc-eecCHHHHHHHHHHHHHhCCceeechH-----HHHHHHHHcCCCHHHHHhhC
Confidence 7766531 112345666666655777 567899999999999999999999944 22110 0011111125
Q ss_pred Ceeee--cccCCCcccceeEEE-eChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHH
Q 013204 267 DLVSF--AKALSSAYMPIGAIL-VSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPK 343 (447)
Q Consensus 267 d~v~~--sK~l~gg~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~ 343 (447)
|.++| +|+++ +|++.++ ++.++++.+.....+.+ +-+.-.-+-.++++..|+.--......+..++.++
T Consensus 192 D~v~~~~tK~g~---~~~gAiv~gn~~~~~~a~~~rK~~G-----gl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~ 263 (342)
T COG2008 192 DSVSFCLTKGGG---APVGAIVFGNRDFAKRARRWRKRAG-----GLMRKARFLAAQGLYALEDDVWRLAADHANAMAAR 263 (342)
T ss_pred CEEEEecccCCc---ceeeeEEEcCHHHHHHHHHHHHHhc-----ccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 76655 56655 5666655 78888887764322222 22322233334444445411011112334444788
Q ss_pred HHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeCCEEEEecCCCCCHHHHH
Q 013204 344 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVD 423 (447)
Q Consensus 344 l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g~~iR~~~~~~~t~e~i~ 423 (447)
|.+.+++..+..+.. +.+.+++.+.+++... ........+...|++....+..+||..++.+++++|+
T Consensus 264 La~~~~~~~G~~~~~--~~~tN~vf~~l~~~~i----------~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~ 331 (342)
T COG2008 264 LAEGLEAKPGVKLAF--PVETNMVFVRLPESAI----------EALRLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVD 331 (342)
T ss_pred HHHhhhhcCCceecc--CCcccEEEEECChHHH----------HHHHhhchhheeeeeccCCCceEEEEeeccCCHHHHH
Confidence 888887543333322 2455666666654210 0111223344445555444446999999999999999
Q ss_pred HHHHHHHHHH
Q 013204 424 ELISKYGKAL 433 (447)
Q Consensus 424 ~~~~~l~~~l 433 (447)
+++..+++.+
T Consensus 332 ~~~~~~~~~~ 341 (342)
T COG2008 332 ELVAAIKALL 341 (342)
T ss_pred HHHHHHHHhh
Confidence 9999988764
No 239
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.79 E-value=4.9e-16 Score=153.85 Aligned_cols=335 Identities=13% Similarity=0.115 Sum_probs=192.5
Q ss_pred HHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEE
Q 013204 53 RLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 132 (447)
Q Consensus 53 ~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~ 132 (447)
.+.+++.+++..+...|+ ......+|.+.+++++ +.+.+++++||++|+..++.... ++| + ||+
T Consensus 58 a~~~a~~~a~~~g~~~Y~----~~~g~~~Lreaia~~~---~~~~vv~t~ggt~A~~~~~~all-------~pG-D-Vii 121 (460)
T PRK13238 58 AMSDRQWAAMMRGDEAYA----GSRSYYRLEDAVKDIF---GYPYTIPTHQGRAAEQILFPVLI-------KKG-D-VVP 121 (460)
T ss_pred hhhHHHHHHHHhCCcccC----CCCCHHHHHHHHHHHh---CCCcEEECCCHHHHHHHHHHHhC-------CCC-C-EEc
Confidence 578888888765443322 3455778999999987 45679999999999999987653 133 4 777
Q ss_pred EcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHH-HHHHHHHHHHHHHhhCCCcEEEEEEc
Q 013204 133 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY-STRLANNLEDLILKEGPETIAAFIAE 211 (447)
Q Consensus 133 ~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~le~~l~~~~~~~~a~vi~e 211 (447)
.++.|..+.......++.+.. +++..... + ...+.+ ...++++|++.+...+++++++|+++
T Consensus 122 ~~p~~~~~~~~i~~~G~~~v~-------------v~~~~~~~---~-~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~ 184 (460)
T PRK13238 122 SNYHFDTTRAHIELNGATAVD-------------LVIDEALD---T-GSRHPFKGNFDLEKLEALIEEVGAENVPFIVMT 184 (460)
T ss_pred cCCcccchHHHHHHcCCEEEE-------------Eecccccc---c-cccccccCCcCHHHHHHHHhhcCCCceeEEEEe
Confidence 777776554333333332221 11110000 0 000001 01225888888875544567777777
Q ss_pred cccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcC--CCcc-----cccc-ccc-c---CCCCCCeeeec-ccCCCc
Q 013204 212 PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA--FGRL-----GTMF-GCD-K---YSIKPDLVSFA-KALSSA 278 (447)
Q Consensus 212 pv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g--~g~~-----g~~~-~~~-~---~~~~~d~v~~s-K~l~gg 278 (447)
..++.+|..+.+.+.+++|+++|++||++||.|+++.. .... |... ... . .+--.|++++| |..+.
T Consensus 185 ~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~- 263 (460)
T PRK13238 185 ITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAM- 263 (460)
T ss_pred cCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCC-
Confidence 66555544667889999999999999999999997741 1000 1000 000 0 01126777765 22222
Q ss_pred ccce-eEEEeC-hhHHHHhhhccCCCCccCcC-CCCCCcHHHHHHHH-HHHHHHhhhcHHHHHHHHHHHHHHhHhhccCC
Q 013204 279 YMPI-GAILVS-PEVSEVIHSQSNTLGSFSHG-FTYSGHPVSCAVAI-EALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 354 (447)
Q Consensus 279 ~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~-~t~~~~~~~~~aa~-a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~ 354 (447)
.|. |+++.+ +++++.+... ....++ .|+++.+..+.+|+ .+|+....++..+...++.++|.+.|++. +.
T Consensus 264 -~~~GG~i~~~d~~l~~~~~~~----~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~-G~ 337 (460)
T PRK13238 264 -VNIGGLLCFRDEDLFTECRTL----CILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA-GV 337 (460)
T ss_pred -CcceeEEEcChHHHHHHhhhc----ccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC-CC
Confidence 232 455556 5777777531 111122 36777665533333 35554334455555555678888888775 55
Q ss_pred CceeeEeeeeeEEEEEeecCCC--CCCCCCCCcchHHHHHHH-HHHcCceEEeeC------------------CEEEEec
Q 013204 355 PIIGEIRGTGLILGTEFADNKS--PNEPFPPEWGIGAYFGAQ-CEKHGMLVRVSG------------------DNIMMSP 413 (447)
Q Consensus 355 ~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~g------------------~~iR~~~ 413 (447)
+++.. .-|.++.+++..-.. +...++ ...++.+ +.+.||.+.+.+ +.+||+.
T Consensus 338 ~~~~p--~Gg~~v~~d~~~~~~~~~~~~~~-----~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~ 410 (460)
T PRK13238 338 PIQTP--AGGHAVFVDAGKFLPHIPAEQFP-----AQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAI 410 (460)
T ss_pred CeEcc--CCceEEEEEchhcCCCCCCCCCc-----hHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEec
Confidence 54432 223444455533110 111111 2335544 557788887642 4699997
Q ss_pred CC-CCCHHHHHHHHHHHHHHHH
Q 013204 414 PF-IMSPEEVDELISKYGKALK 434 (447)
Q Consensus 414 ~~-~~t~e~i~~~~~~l~~~l~ 434 (447)
|- ..|.++++.+.++|.+..+
T Consensus 411 ~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 411 PRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred ccccCCHHHHHHHHHHHHHHHH
Confidence 73 3499999999999988663
No 240
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.79 E-value=1.2e-16 Score=158.93 Aligned_cols=348 Identities=15% Similarity=0.139 Sum_probs=182.4
Q ss_pred CCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHh-cCc--CC--CCeEEEeCChhhHHHHHHHHHHHHHHhc
Q 013204 48 GGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEM-FTA--SK--MAKVFFTNSGSEANDTQVKLVWYYNNAL 122 (447)
Q Consensus 48 G~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~--~~--~~~v~~~~sGseA~~~Al~~~~~~~~~~ 122 (447)
|...|+.+.++.+.+.. .. |+...+..+....+++.+.+. ... .. .++|+.++|+++|+..++..+.... -
T Consensus 111 ~~~~~~~v~e~~~~~~~-~~-Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~--l 186 (527)
T PRK09275 111 GFDADEFVYELVDGIIG-DN-YPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENG--L 186 (527)
T ss_pred CCCCCHHHHHHHHHHhc-CC-CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhh--c
Confidence 33445544446666632 22 332233344444454433322 111 12 3489999999999999888531100 0
Q ss_pred CCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCC--CcccCCCCCCChhHHHHHHHHHHHHHHHhh
Q 013204 123 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYSTRLANNLEDLILKE 200 (447)
Q Consensus 123 ~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~le~~l~~~ 200 (447)
. ..+++|++.+|.|..+...+........ ...++.. +.|. .+.+++++++.
T Consensus 187 l-~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~-----------~v~v~~~~~~~f~-------------~d~~~l~~~~~-- 239 (527)
T PRK09275 187 L-KAGDKIALMTPIFTPYLEIPELPRYDLE-----------VVHINADEENEWQ-------------YPDSELEKLRD-- 239 (527)
T ss_pred C-CCCCEEEEeCCChHHHHHHHHHcCCCeE-----------EEEeecCcccCCC-------------CCHHHHHhhcC--
Confidence 1 3458899999999888654433221110 0011110 0011 01256666543
Q ss_pred CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHh--cCCEEEEehhhcCCCccccccccccCCCCCC-ee---eeccc
Q 013204 201 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFGRLGTMFGCDKYSIKPD-LV---SFAKA 274 (447)
Q Consensus 201 ~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~--~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d-~v---~~sK~ 274 (447)
++..++++++|.|++| .+.+.+.+++|.++|++ +++++|.||+|..|.. .... .....|+ ++ +|||.
T Consensus 240 -~~tkai~l~nP~NPTG--~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~s--~~~~~~~~~I~v~SfSK~ 312 (527)
T PRK09275 240 -PSIKALFLVNPSNPPS--VAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD--DFRS--LFAVLPYNTILVYSFSKY 312 (527)
T ss_pred -CCCCEEEEeCCcCCcC--CCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc--cccC--HHHhCCCCEEEEeehhhh
Confidence 3344566678877776 56688999999999965 5999999999987742 1111 1111232 22 68998
Q ss_pred CCCcccceeEEEeChh-----HHHHh--------hhcc-----------------CCCCccCcCCCCCCcHHHHHH-H--
Q 013204 275 LSSAYMPIGAILVSPE-----VSEVI--------HSQS-----------------NTLGSFSHGFTYSGHPVSCAV-A-- 321 (447)
Q Consensus 275 l~gg~~~~g~~~~~~~-----~~~~~--------~~~~-----------------~~~~~~~~~~t~~~~~~~~~a-a-- 321 (447)
++..+|++|+++++++ +++.+ .... ...+.+....+.+.+...+.+ +
T Consensus 313 f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~ 392 (527)
T PRK09275 313 FGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALF 392 (527)
T ss_pred ccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHH
Confidence 8754599999999876 33222 0000 000111222344444444443 2
Q ss_pred --HHHHHHHhhhcH----HHHHHHHHHHHHHhHhhccCCCceeeEeeeee-EEEEEeecCCC--CCCCCCC---CcchHH
Q 013204 322 --IEALKIYKERNI----VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL-ILGTEFADNKS--PNEPFPP---EWGIGA 389 (447)
Q Consensus 322 --~a~l~~~~~~~~----~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~-~~~i~~~~~~~--~~~~~~~---~~~~~~ 389 (447)
.+.++. .++. .+.++++.+.+.+.| +.+.. .....|. ++.+++..... ....+.. ......
T Consensus 393 ~~~all~~--~~~~~~~~~~~~~~Rr~~l~~~L----g~~~~-~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~ 465 (527)
T PRK09275 393 SLFALLDE--EDAYKKAMKDIIRRRYKALYEGL----GLPEP-EDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPV 465 (527)
T ss_pred HHHHHHhC--chHHHHHHHHHHHHHHHHHHHHc----CCCCc-CCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHH
Confidence 222331 1222 233333333333333 11211 1233444 44555543110 0000100 000123
Q ss_pred HHHHHHH-HcCceEEeeC------CEEEEecCCC-CCHHHHHHHHHHHHHHHHHHHHHHHH
Q 013204 390 YFGAQCE-KHGMLVRVSG------DNIMMSPPFI-MSPEEVDELISKYGKALKATEERVKE 442 (447)
Q Consensus 390 ~~~~~l~-~~Gi~~~~~g------~~iR~~~~~~-~t~e~i~~~~~~l~~~l~~~~~~~~~ 442 (447)
.+..+|+ +.||.+.|+. ..+|++ +. .+++++.++.++|.+.+.+..++.+.
T Consensus 466 ~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis--~a~~~~~~~~~~~~rl~~~l~~y~~~~~~ 524 (527)
T PRK09275 466 DLLFRLAEETGVVLLPGGGFGGPEWSVRVS--LANLNEEDYAKIGKAIRKLLDEYYEEYKK 524 (527)
T ss_pred HHHHHHHhcCCEEEeCchhhCCCCCeEEEE--EecCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555555 5699988762 469999 55 68899999999999999998887754
No 241
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=3.8e-17 Score=158.14 Aligned_cols=281 Identities=16% Similarity=0.173 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCC
Q 013204 78 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF 157 (447)
Q Consensus 78 ~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 157 (447)
...+|.+.+++.+ +.++++|++++|+++++..+++... +++++.|++.+|.|..+...+...+. ..
T Consensus 61 ~~~~Lr~aia~~~-~~~~~~I~it~Gs~~~i~~~~~~~~-------~~g~d~vlv~~P~y~~y~~~~~~~g~-~v----- 126 (354)
T PRK04635 61 QPPELINAYSAYA-GVAPEQILTSRGADEAIELLIRAFC-------EPGQDSIACFGPTYGMYAISAETFNV-GV----- 126 (354)
T ss_pred CHHHHHHHHHHHh-CcCHHHEEEeCCHHHHHHHHHHHhc-------CCCCCeEEEcCCChHHHHHHHHHcCC-EE-----
Confidence 3567888888876 4577899999999999999988652 23447899999999776543332221 11
Q ss_pred CCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhc
Q 013204 158 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY 237 (447)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~ 237 (447)
..++....+. . +.+.+++ + ++...++++.|.|++ |.+ .+.+.+++|.+.|+
T Consensus 127 -------~~v~~~~~~~-----~--------~~~~l~~-~----~~~~li~i~nP~NPT-G~~-~~~~~l~~l~~~~~-- 177 (354)
T PRK04635 127 -------KALPLTADYQ-----L--------PLDYIEQ-L----DGAKLVFICNPNNPT-GTV-IDRADIEQLIEMTP-- 177 (354)
T ss_pred -------EEEecCCCCC-----C--------CHHHHHh-c----cCCCEEEEeCCCCCC-Ccc-CCHHHHHHHHHhCC--
Confidence 1111111000 0 0133432 1 223334555555555 444 45666677766665
Q ss_pred CCEEEEehhhcCCCccccccccccCCCCCCee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCc
Q 013204 238 DILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 314 (447)
Q Consensus 238 g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 314 (447)
++++|+||+|..|... .. ........+.++ +|||.++-+++|+|++++++++++.+... . ..++.+
T Consensus 178 ~~~vivDeay~~~~~~-~s-~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~-------~--~~~~~~ 246 (354)
T PRK04635 178 DAIVVVDEAYIEFCPE-YS-VADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRV-------I--APYPVP 246 (354)
T ss_pred CcEEEEeCchHhhccC-cc-hHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhh-------c--CCCCCC
Confidence 4999999999877421 11 111111123333 68999874338999999999998887531 1 134445
Q ss_pred HHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHH
Q 013204 315 PVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYF 391 (447)
Q Consensus 315 ~~~~~aa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 391 (447)
...+.++.++++.... .+..+.++++++.+.+.|+++ +.+...++.|.++.+.+.+ ...+
T Consensus 247 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---~~~~~~~~~g~f~~~~~~~--------------~~~~ 309 (354)
T PRK04635 247 LPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMY---GGAKVLEGNGNYVLAKFDD--------------VDAV 309 (354)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC---CCceECCCCCcEEEEECCC--------------HHHH
Confidence 5566666666642111 122344555556666777665 2122234456666665541 2357
Q ss_pred HHHHHHcCceEEeeC-----CEEEEecCCCCCHHHHHHHHHHHHHH
Q 013204 392 GAQCEKHGMLVRVSG-----DNIMMSPPFIMSPEEVDELISKYGKA 432 (447)
Q Consensus 392 ~~~l~~~Gi~~~~~g-----~~iR~~~~~~~t~e~i~~~~~~l~~~ 432 (447)
.+.|.++||.++.++ +.+|++ ..+++++++++++|++.
T Consensus 310 ~~~l~~~gv~v~~~~~~~~~~~lRis---~~~~e~~~~l~~al~~~ 352 (354)
T PRK04635 310 FKALWDAGIVARAYKDPRLANCIRFS---FSNRAETDKLIGLIRNQ 352 (354)
T ss_pred HHHHHHCCEEEEECCCCCCCCeEEEE---eCCHHHHHHHHHHHHHh
Confidence 788999999997652 469999 46899999999998764
No 242
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=1.1e-17 Score=155.02 Aligned_cols=315 Identities=17% Similarity=0.189 Sum_probs=197.4
Q ss_pred CCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcce
Q 013204 50 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 129 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~ 129 (447)
+.+.+.+++...--.... +..-.+..+.+.++++..++.+ +.+..+.++-|...|..-+.... ++..
T Consensus 156 ca~~~~~~~~kygl~~cs-s~~e~G~~~~hkelE~l~A~f~---g~e~a~vF~mGf~TNs~~~p~l~---------~~gs 222 (519)
T KOG1357|consen 156 CAEASLKSFDKYGLSRCS-SRHEAGTTEEHKELEELVARFL---GVEDAIVFSMGFATNSMNIPSLL---------GKGS 222 (519)
T ss_pred CChHHHHHHHHhcccccc-cchhcccHHHHHHHHHHHHHhc---CCcceEEEeccccccccCcceee---------cCCc
Confidence 455555555443221111 1112357788999999999886 44455666667777766665442 2233
Q ss_pred EEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhh----C----
Q 013204 130 FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE----G---- 201 (447)
Q Consensus 130 vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~----~---- 201 (447)
.|+-+.--|++......++|... --|.|+++.+||++|+.. .
T Consensus 223 LIiSDelNHaSi~~GaRLSgAti------------------------------RVfkHNdm~~LEr~Lrd~I~~gqP~Th 272 (519)
T KOG1357|consen 223 LIISDELNHASLITGARLSGATT------------------------------RVFRHNDMQGLERLLRDAIVYGQPKTH 272 (519)
T ss_pred ceeeccccchheeccccccCceE------------------------------EEEecCCHHHHHHHHHHHHhcCCCCcC
Confidence 44434455777544444444321 123455568888887642 1
Q ss_pred -CCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc--ccccccCCCCC---Cee--eecc
Q 013204 202 -PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFGCDKYSIKP---DLV--SFAK 273 (447)
Q Consensus 202 -~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~--~~~~~~~~~~~---d~v--~~sK 273 (447)
|-+...||+|...++.|.++. |.++..++|+|.++|+.||+|+ .|..|. .+..+++++.| |++ +|.|
T Consensus 273 rp~kki~iivegiysmEg~iv~----Lp~vvalkkkykayl~lDEAHS-iGA~g~tGrgvce~~g~d~~dvDImMGtftK 347 (519)
T KOG1357|consen 273 RPWKKILICVEGIYSMEGTIVD----LPEVVALKKKYKAYLYLDEAHS-IGAMGATGRGVCEYFGVDPEDVDIMMGTFTK 347 (519)
T ss_pred CcchheeeeeccceeccCeecc----cHHHHHhhccccEEEEeecccc-ccccCCCCcceeeccCCCchhheeecceehh
Confidence 223558999999999999988 9999999999999999999998 344443 45678888764 444 6788
Q ss_pred cCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh-------hcHHHHHHHHHHHHHH
Q 013204 274 ALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-------RNIVEQVNKIAPKFQD 346 (447)
Q Consensus 274 ~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-------~~~~~~~~~~~~~l~~ 346 (447)
++++++ |++.+++++++.++..+ . .+......+|..+...+.+++.+.- .+..+++.++..++|.
T Consensus 348 Sfga~G---Gyiagsk~lid~lrt~s---~--~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~ 419 (519)
T KOG1357|consen 348 SFGAAG---GYIAGSKELIDYLRTPS---P--SALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRW 419 (519)
T ss_pred hccccc---ceecCcHHHHhhhccCC---C--ceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHH
Confidence 888654 78999999999886421 1 1212222344444556677777652 2345777888888888
Q ss_pred hHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC--------CEEEEecCCCCC
Q 013204 347 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--------DNIMMSPPFIMS 418 (447)
Q Consensus 347 ~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g--------~~iR~~~~~~~t 418 (447)
.|+.. .++..-........+-+..+. ....+.+.|+++++.+...+ .++|++.+..++
T Consensus 420 ~l~~~---gfivyG~~dSpVvplll~~~~-----------k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht 485 (519)
T KOG1357|consen 420 ELQKM---GFIVYGNNDSPVVPLLLYGPA-----------KIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHT 485 (519)
T ss_pred hhhcC---cEEEecCCCCCcceeeecCcc-----------cccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhccccc
Confidence 88765 111100001111111111111 12347788999887766543 457999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 013204 419 PEEVDELISKYGKALK 434 (447)
Q Consensus 419 ~e~i~~~~~~l~~~l~ 434 (447)
.|+++++++.+++.=+
T Consensus 486 ~e~ld~~l~~i~~~g~ 501 (519)
T KOG1357|consen 486 KEDLDRALEVIDRVGD 501 (519)
T ss_pred HHHHHHHHHHHhhhch
Confidence 9999999999877643
No 243
>PLN02397 aspartate transaminase
Probab=99.78 E-value=1.9e-16 Score=156.47 Aligned_cols=256 Identities=13% Similarity=0.055 Sum_probs=145.7
Q ss_pred cceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCC-C-CcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCc
Q 013204 127 KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-P-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPET 204 (447)
Q Consensus 127 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~ 204 (447)
++.|++.+|+|..+.......+..... +++ + +.+. .+++.+++.+....++.
T Consensus 142 Gd~Vlv~~P~y~~y~~~~~~~g~~~~~-------------v~l~~~~~~~-------------~d~~~l~~~l~~~~~~~ 195 (423)
T PLN02397 142 GSTIYIPNPTWGNHHNIFRDAGVPVRT-------------YRYYDPKTRG-------------LDFDGLLEDLKAAPDGS 195 (423)
T ss_pred CCEEEEeCCCchhHHHHHHHcCCeEEE-------------eecccCcCCc-------------cCHHHHHHHHHhCCCCC
Confidence 478999999998886555544433211 111 0 0000 01255555554332333
Q ss_pred EEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc--cc-cc-ccCCCCCCee---eecccCCC
Q 013204 205 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MF-GC-DKYSIKPDLV---SFAKALSS 277 (447)
Q Consensus 205 ~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~--~~-~~-~~~~~~~d~v---~~sK~l~g 277 (447)
...++..|.|++| ...+.+.+++|.++|++||+++|.||+|.+|...+. .. .. .......+++ +|||.++-
T Consensus 196 ~~i~~~~P~NPTG--~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~ 273 (423)
T PLN02397 196 FVLLHACAHNPTG--VDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGL 273 (423)
T ss_pred EEEEeCCCCCCCC--CCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCC
Confidence 4344444566665 566889999999999999999999999998854321 11 11 1111112233 68999885
Q ss_pred cccceeEEE--e-ChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh--------hhcHHHHHHHHHHHHHH
Q 013204 278 AYMPIGAIL--V-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--------ERNIVEQVNKIAPKFQD 346 (447)
Q Consensus 278 g~~~~g~~~--~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--------~~~~~~~~~~~~~~l~~ 346 (447)
.++|+|+++ . ++++++.+...- .........+.+.+++.++.++|+.-. -++..+.++++++.+.+
T Consensus 274 ~G~RvG~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~ 350 (423)
T PLN02397 274 YGERVGALSVVCKSADVAVRVKSQL---KLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYD 350 (423)
T ss_pred ccccceEEEEEeCCHHHHHHHHHHH---HHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 339999984 4 555544332100 011111122345556666655554210 12345577777777777
Q ss_pred hHhhccCCC-ceeeEeeeeeEE-EEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeCCEEEEecCCCCCHHHHH
Q 013204 347 GVKAFSDSP-IIGEIRGTGLIL-GTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSGDNIMMSPPFIMSPEEVD 423 (447)
Q Consensus 347 ~L~~l~~~~-~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g~~iR~~~~~~~t~e~i~ 423 (447)
.|+++ ..+ ....+..+|.++ .+.+. ..++++|+ +.||.+.+.+ |++.. ..+++.++
T Consensus 351 ~L~~~-~~~~~~~~~~p~gg~fl~~~l~----------------~~~~~~Ll~~~~V~v~~~~---Ri~~~-~~~~~~i~ 409 (423)
T PLN02397 351 ALEAR-GSPGDWSHITKQIGMFSFTGLN----------------KEQVDRMTKEYHIYMTRDG---RISMA-GLSSKNVP 409 (423)
T ss_pred HHHhc-CCCCCCCcccCCceEEEecCCC----------------HHHHHHHHHhCCEEECCCC---eEEEe-eCCHHHHH
Confidence 77776 211 122334555544 33332 12556664 6699987544 88832 38999999
Q ss_pred HHHHHHHHHHH
Q 013204 424 ELISKYGKALK 434 (447)
Q Consensus 424 ~~~~~l~~~l~ 434 (447)
+++++|++++.
T Consensus 410 ~~~~~i~~~~~ 420 (423)
T PLN02397 410 YLADAIHAVVT 420 (423)
T ss_pred HHHHHHHHHHh
Confidence 99999999974
No 244
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=1.2e-16 Score=154.93 Aligned_cols=289 Identities=15% Similarity=0.175 Sum_probs=173.7
Q ss_pred HHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCC
Q 013204 79 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD 158 (447)
Q Consensus 79 ~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 158 (447)
..++.+.+++.+ ..+.++|++++|+++++..+++... .++++.|++.+|.|......... .|...
T Consensus 61 ~~~lr~~ia~~~-~~~~~~I~~t~G~~~~l~~~~~~~~-------~~g~~~vlv~~p~y~~~~~~~~~-~g~~~------ 125 (364)
T PRK04781 61 PPGLRSALAALY-GCAPEQLLIGRGSDEAIDLLVRALC-------VPGRDAVLVTPPVFGMYAVCARL-QNAPL------ 125 (364)
T ss_pred HHHHHHHHHHHh-CcChHHEEEeCCHHHHHHHHHHHhc-------CCCCCeEEEcCCChHHHHHHHHH-cCCEE------
Confidence 567888888876 3567899999999999999988653 13336788878877544332222 12111
Q ss_pred CCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcC
Q 013204 159 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 238 (447)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g 238 (447)
..++..+. . +.+. .+++++.+.+. .+ ++.+|++...++.+|.+ .+.+.++++.+.|+ ++
T Consensus 126 ------~~v~~~~~------~---~~~~-~d~~~l~~~~~--~~-~~~lv~l~~p~NPTG~~-~~~~~~~~l~~~~~-~~ 184 (364)
T PRK04781 126 ------VEVPLVDG------A---DGFH-ADVPAIVAAAL--AS-NAKLVFLCSPSNPAGSA-IALDQIERALQALQ-GK 184 (364)
T ss_pred ------EEEecCCC------c---cCCC-cCHHHHHHHHh--cc-CCeEEEEcCCCCCCCCC-cCHHHHHHHHHhCC-CC
Confidence 11111000 0 0000 00234333222 12 33444443444445544 46677777777775 47
Q ss_pred CEEEEehhhcCCCccccccccccCCCCCCee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcH
Q 013204 239 ILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 315 (447)
Q Consensus 239 ~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 315 (447)
+++|+||+|..|.... ......+..+.++ +|||.++-+++|+|++++++++++.+... ...+..+.
T Consensus 185 ~~iI~Deay~~f~~~~--~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~---------~~~~~~~~ 253 (364)
T PRK04781 185 ALVVVDEAYGEFSDVP--SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRC---------QAPYPVPT 253 (364)
T ss_pred cEEEEeCcchhhcCCc--chHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhc---------cCCCCCCH
Confidence 9999999999774321 1111112224444 68999884339999999999999988642 12455566
Q ss_pred HHHHHHHHHHHHHh---hhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHH
Q 013204 316 VSCAVAIEALKIYK---ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFG 392 (447)
Q Consensus 316 ~~~~aa~a~l~~~~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 392 (447)
+++.++.++|+.-. -.+..+.++++.+.+.+.|+++.... ...+..|.++.+.+.+ ...+.
T Consensus 254 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~--~~~p~~g~f~~~~~~~--------------~~~~~ 317 (364)
T PRK04781 254 PCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVR--RVYPSQGNFLLVRFDD--------------AEAAF 317 (364)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCC--eECCCCCcEEEEEcCC--------------HHHHH
Confidence 67776666665311 11223445556666667776652211 1234567777777642 23577
Q ss_pred HHHHHcCceEEeeC------CEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 393 AQCEKHGMLVRVSG------DNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 393 ~~l~~~Gi~~~~~g------~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
+.|.++||.+.++. +.+|++ ..++++.++++++|++..
T Consensus 318 ~~l~~~gI~v~~~~~~~~~~~~~Ris---~~~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 318 QALLAAGVVVRDQRAAPRLSDALRIT---LGTPEQNDRVLAALQRTQ 361 (364)
T ss_pred HHHHHCCeEEeeCCCCCCCCCeEEEe---CCCHHHHHHHHHHHHHHH
Confidence 88999999998762 469999 457899999999998754
No 245
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.77 E-value=1.5e-15 Score=150.81 Aligned_cols=345 Identities=18% Similarity=0.202 Sum_probs=214.2
Q ss_pred CCCCEEEecCCccccccCCC-CCHHHHHHHHHHHhcCC----cccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCC
Q 013204 30 VNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLP----FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNS 103 (447)
Q Consensus 30 ~dg~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~s 103 (447)
.+....+||..++.. + .. ....+.+++.+...+.. ..+....+..+....+++.+..... ...+++|++|+|
T Consensus 86 ~~~~~~i~f~~g~p~-~-~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G 163 (459)
T COG1167 86 EDDPSVIDFAGGLPD-P-SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSG 163 (459)
T ss_pred cCCCceecCCCCCCC-c-ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCC
Confidence 344678888777521 1 22 23455555555554321 1222222334444555555552221 246679999999
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChh
Q 013204 104 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 183 (447)
Q Consensus 104 GseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (447)
..+|++.++++.. ..++.|++=+|+|++........+- .. ..++..+ .+.
T Consensus 164 ~q~al~l~~~~l~--------~pGd~v~vE~PtY~~~~~~~~~~g~-~~------------~~vp~d~------~G~--- 213 (459)
T COG1167 164 AQQALDLLLRLLL--------DPGDTVLVEDPTYPGALQALEALGA-RV------------IPVPVDE------DGI--- 213 (459)
T ss_pred HHHHHHHHHHHhC--------CCCCEEEEcCCCcHHHHHHHHHcCC-cE------------EecCCCC------CCC---
Confidence 9999999998774 3458899999999997543332221 10 1111111 011
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEEccc-cCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-cccc
Q 013204 184 EYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDK 261 (447)
Q Consensus 184 ~~~~~~~~~le~~l~~~~~~~~a~vi~epv-~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-~~~~ 261 (447)
++++|++.+... +++++.+.|. ++..|.+ .+.+--++|.++|++||+++|=|+.+..|...+.+- ....
T Consensus 214 -----~~e~le~~~~~~---~~k~~y~~P~~qNPtG~t-ms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ 284 (459)
T COG1167 214 -----DPEALEEALAQW---KPKAVYVTPTFQNPTGVT-MSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKA 284 (459)
T ss_pred -----CHHHHHHHHhhc---CCcEEEECCCCCCCCCCc-cCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHh
Confidence 138888888753 5678888886 5666644 467778899999999999999999999885554332 1222
Q ss_pred CCCCCC----eeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHH--Hhh--hcH
Q 013204 262 YSIKPD----LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI--YKE--RNI 333 (447)
Q Consensus 262 ~~~~~d----~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~--~~~--~~~ 333 (447)
+.- ++ +-+|||.+.-| +++|++++++++++.+... .+..+.+.+.+.+.+...-+.. ..+ ..+
T Consensus 285 ld~-~~rViy~gSFSK~l~Pg-lRlG~vv~p~~~~~~~~~~-------k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~l 355 (459)
T COG1167 285 LDA-PGRVIYLGSFSKTLAPG-LRLGYVVAPPELIEKLLRL-------KQAADLGPSSLSQAALAAFLLSGHYDRHLRRL 355 (459)
T ss_pred hCC-CCCEEEEeeehhhcccc-cceeeeeCCHHHHHHHHHH-------HHHhcCCCChHHHHHHHHHHHcCCHHHHHHHH
Confidence 111 23 23799999877 8999999999988887632 2334566666766554444431 000 223
Q ss_pred HHHHHHHHHHHHHhHhhccCCCceeeEee-eeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC------
Q 013204 334 VEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------ 406 (447)
Q Consensus 334 ~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g------ 406 (447)
+..++++.+.+.+.|++.. .+......+ -|.++++.++.... ...+.+.++++|+.+.+.|
T Consensus 356 R~~y~~rr~~l~~~L~~~~-~~~~~~~~p~gG~flwl~l~~~~~-----------~~~l~~~a~~~gv~i~~~g~~f~~~ 423 (459)
T COG1167 356 RREYARRRDALLEALAEYL-PELATWTRPEGGLFLWLELPEGID-----------ARELLAAALEKGVVVTPLGSAFSAD 423 (459)
T ss_pred HHHHHHHHHHHHHHHHHhC-CCCeeeecCCceEEEEEEcCCCCC-----------HHHHHHHHHHCCCEEEcCCccccCC
Confidence 3344444444444444431 123333333 36777888876431 4568899999999999832
Q ss_pred ----CEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 407 ----DNIMMSPPFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 407 ----~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
+.+|++.. ..++++|++++++|.+++.+..
T Consensus 424 ~~~~~~~Rl~~s-~~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 424 GDPRNGLRLSFS-SPSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred CCCCCeEEEEcC-CCCHHHHHHHHHHHHHHHHHHh
Confidence 46999976 4569999999999999987753
No 246
>PRK08637 hypothetical protein; Provisional
Probab=99.77 E-value=4.7e-16 Score=152.37 Aligned_cols=287 Identities=11% Similarity=0.074 Sum_probs=169.2
Q ss_pred CeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCC-Cccc
Q 013204 96 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWR 174 (447)
Q Consensus 96 ~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 174 (447)
+++++++|+++++..+++++. ..++.|++.+|+|...........|... ..++.. +.+
T Consensus 70 ~~I~it~G~~~al~~~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~~g~~v------------v~v~~~~~~~- 128 (388)
T PRK08637 70 SLPIVTNALTHGLSLVADLFV--------DQGDTVLLPDHNWGNYKLTFNTRRGAEI------------VTYPIFDEDG- 128 (388)
T ss_pred ceeeEccchHHHHHHHHHHhc--------CCCCEEEEcCCCCccHHHHHHHhcCCEE------------EEecccCCCC-
Confidence 578999999999999988763 3347899999999887643222222211 111110 000
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhh-CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHh-----cCCEEEEehhhc
Q 013204 175 YAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK-----YDILFIADEVIC 248 (447)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~le~~l~~~-~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~-----~g~~li~DEv~~ 248 (447)
. .+++++++.+... .+.+...++..|.|++| ...+.+.+++|.++|++ |++++|.||+|.
T Consensus 129 ---------~---~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG--~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~ 194 (388)
T PRK08637 129 ---------G---FDTDALKEALQAAYNKGKVIVILNFPNNPTG--YTPTEKEATAIVEAIKELADAGTKVVAVVDDAYF 194 (388)
T ss_pred ---------c---CCHHHHHHHHHhhccCCCEEEEEeCCCCCCC--CCCCHHHHHHHHHHHHHHHhcCCcEEEEecccch
Confidence 0 0146777766521 12233344455666666 56788999999999885 999999999999
Q ss_pred CCCcccccc-c-cc-cCCCCCCe--e---eecccCCCcccceeEEEeC------hhHHHHhhhccCCCCccCcCCCCCCc
Q 013204 249 AFGRLGTMF-G-CD-KYSIKPDL--V---SFAKALSSAYMPIGAILVS------PEVSEVIHSQSNTLGSFSHGFTYSGH 314 (447)
Q Consensus 249 g~g~~g~~~-~-~~-~~~~~~d~--v---~~sK~l~gg~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~t~~~~ 314 (447)
+|...+... . .. ..+....+ + ++||.++.+++|+|+++.+ +++++.+..... .......+..+
T Consensus 195 ~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~s 271 (388)
T PRK08637 195 GLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVK---GLIRSNISNGP 271 (388)
T ss_pred hcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHH---HHhhcccCCCC
Confidence 885444321 1 11 11222232 2 5899877655999999854 577776642100 00111223556
Q ss_pred HHHHHHHHHHHHHHhhhcHHHH-------HHHHHHHHHHhHhhccCCCceeeEee-eeeEEEEEeecCCCCCCCCCCCcc
Q 013204 315 PVSCAVAIEALKIYKERNIVEQ-------VNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWG 386 (447)
Q Consensus 315 ~~~~~aa~a~l~~~~~~~~~~~-------~~~~~~~l~~~L~~l~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~ 386 (447)
.+++.++.+.++ ...+..+ ++++.+.+.+.|++....+.+...+. .|.++.+.+...
T Consensus 272 ~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~~------------ 336 (388)
T PRK08637 272 HPSQSAVLRALN---SPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKGV------------ 336 (388)
T ss_pred cHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCChH------------
Confidence 778887777764 2222222 33333334444433210012222333 355666666421
Q ss_pred hHHHHHHHHH-HcCceEEeeC-CEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 387 IGAYFGAQCE-KHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 387 ~~~~~~~~l~-~~Gi~~~~~g-~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
....+.+.|+ ++||.+...+ +.+||+... .+++++++++++|.++++.+
T Consensus 337 ~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~-~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 337 DAEELRVHLLEKYGIGTIALNETDLRIAFSC-VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred HHHHHHHHHhhhcceEEEeccCCceEEEeec-CCHHHHHHHHHHHHHHHHhc
Confidence 1345778875 6799877654 469999543 68999999999999988764
No 247
>PRK14012 cysteine desulfurase; Provisional
Probab=99.76 E-value=2.4e-15 Score=148.31 Aligned_cols=338 Identities=18% Similarity=0.183 Sum_probs=186.7
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHh--cC-Ccccc-c--CcC-CChHHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLN--TL-PFYHS-F--WNR-TTKPSLDLAKELLEMFTASKMAKVFFTNSGS 105 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~--~~-~~~~~-~--~~~-~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGs 105 (447)
+.|+|..+. +..++.+.+++.+... +. ...+. . +.. ..+...++++.+++++ +.+.+.++|++||+
T Consensus 4 ~iyld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~-g~~~~~v~~~~g~t 76 (404)
T PRK14012 4 PIYLDYSAT------TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI-GADPREIVFTSGAT 76 (404)
T ss_pred eEEecCcCC------CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc-CcCcCeEEEeCCHH
Confidence 468887544 4578999999988875 21 11110 0 000 1234556777888776 34567899999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcc--cCCccccCCCCCCCCcceecCCCCcccCCCCCCChh
Q 013204 106 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL--SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 183 (447)
Q Consensus 106 eA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (447)
+|+..+++.+.... .+.++.|++....|+......... .|.. +..++.++.+
T Consensus 77 ~al~~~l~~l~~~~----~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~------------~~~v~~~~~g---------- 130 (404)
T PRK14012 77 ESDNLAIKGAAHFY----QKKGKHIITSKTEHKAVLDTCRQLEREGFE------------VTYLDPQSNG---------- 130 (404)
T ss_pred HHHHHHHHHHHHhh----cCCCCEEEEecCccHHHHHHHHHHHhCCCE------------EEEEccCCCC----------
Confidence 99999988653210 022356766655554432211111 1211 1112211110
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCC
Q 013204 184 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS 263 (447)
Q Consensus 184 ~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~ 263 (447)
..+++++++.+. .++++|++..+++.+|.+.+ +++|.++|++||+++|+|++|+ +|... +....
T Consensus 131 ---~~d~~~l~~~i~----~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~g~~~----~~~~~ 194 (404)
T PRK14012 131 ---IIDLEKLEAAMR----DDTILVSIMHVNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-VGKVP----IDLSK 194 (404)
T ss_pred ---cCCHHHHHHhcC----CCCEEEEEECcCCCccchhh----HHHHHHHHHHcCCEEEEEcchh-cCCcc----cCccc
Confidence 011367777664 34568888888888888877 8999999999999999999997 44331 11223
Q ss_pred CCCCeeeec--ccCCCcccceeEEEeChhHHHHhhhcc---CCCCccCcCCCCCCcHHHHHHHHHHHHHHh--hhcHHHH
Q 013204 264 IKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQS---NTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQ 336 (447)
Q Consensus 264 ~~~d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~--~~~~~~~ 336 (447)
..+|++++| |.++ + .++|+++.+++....+.... .....+. ..+.+.....+..++++.+. .++..++
T Consensus 195 ~~~D~~~~s~~K~~g-p-~g~G~l~~~~~~~~~~~~~~~g~~~~~~~~---~gt~~~~~~~~l~~al~~~~~~~~~~~~~ 269 (404)
T PRK14012 195 LKVDLMSFSAHKIYG-P-KGIGALYVRRKPRVRLEAQMHGGGHERGMR---SGTLPTHQIVGMGEAARIAKEEMATENER 269 (404)
T ss_pred CCCCEEEEehhhccC-C-CceEEEEEecCCCCCCCceecCCCccCCcc---CCCcCHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 458998887 9554 3 36888888776432221100 0000011 11223333333334454432 2334566
Q ss_pred HHHHHHHHHHhHhhccCCCceeeEe-eeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEE------------
Q 013204 337 VNKIAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR------------ 403 (447)
Q Consensus 337 ~~~~~~~l~~~L~~l~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~------------ 403 (447)
.+++.+++.+.|+++....+..... .......+.+.... ...+...|. ++.+.
T Consensus 270 ~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~--~~~i~~g~~~~~~~~~~ 335 (404)
T PRK14012 270 IRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVE------------GESLIMALK--DLAVSSGSACTSASLEP 335 (404)
T ss_pred HHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcC------------HHHHHHhCC--CeEEEchhhhCCCCCCC
Confidence 6777777777776652211111100 11111112222111 112333332 22221
Q ss_pred ------------eeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 404 ------------VSGDNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 404 ------------~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
...+.||++++..+|++|+|++++.|+++++.++.
T Consensus 336 ~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~~ 382 (404)
T PRK14012 336 SYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLRE 382 (404)
T ss_pred CHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11256999999999999999999999999887753
No 248
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.76 E-value=1.8e-16 Score=157.34 Aligned_cols=351 Identities=13% Similarity=0.111 Sum_probs=179.1
Q ss_pred CCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHH-HHHHhcCc--CCCC--eEEEeCChhhHHHHHHHHHHHHHHhc
Q 013204 48 GGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAK-ELLEMFTA--SKMA--KVFFTNSGSEANDTQVKLVWYYNNAL 122 (447)
Q Consensus 48 G~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~~~~~--~~~~--~v~~~~sGseA~~~Al~~~~~~~~~~ 122 (447)
+..+|+++.++.+.+.. ..+ +...+..+...++++ .+.+.+.. ...+ +|++++|+++|+..++..+.....
T Consensus 105 ~~~~~~~~~~~~~~~~~-~~Y-~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~l-- 180 (521)
T TIGR03801 105 GFDPDAFLYEMCDGIIG-DNY-PVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANEL-- 180 (521)
T ss_pred CCCCCHHHHHHHHHhhc-CCC-CCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhc--
Confidence 44567777887777632 222 211222233334433 22322211 2333 899999999999998875311100
Q ss_pred CCCCcceEEEEcCCCccchhhhhccc-CCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhC
Q 013204 123 GRPNKKKFIARQKSYHGSTLIAASLS-GLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG 201 (447)
Q Consensus 123 ~~~~~~~vi~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~ 201 (447)
. ..+++|++.+|.|..+...+.... +... ..+++..... ....+ |. .+.+++++++.
T Consensus 181 l-~pGD~Vlv~~P~y~~y~~~~~l~~~g~~v------------v~i~~~~~~~--~g~~~---~~-~d~~~l~~~~~--- 238 (521)
T TIGR03801 181 L-KKGDKIALMTPIFTPYLEIPELPRYDFEV------------VRIKADEMTE--DGTHT---WQ-YPDKELEKLRD--- 238 (521)
T ss_pred C-CCCCEEEEeCCCcHHHHHHHHHhcCCcEE------------EEeecccccc--ccccc---CC-CCHHHHHHhcC---
Confidence 1 335889999999988754433221 1111 1111110000 00000 00 01255665443
Q ss_pred CCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhc--CCEEEEehhhcCCCccccccccccCCCCCC-ee---eecccC
Q 013204 202 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPD-LV---SFAKAL 275 (447)
Q Consensus 202 ~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~--g~~li~DEv~~g~g~~g~~~~~~~~~~~~d-~v---~~sK~l 275 (447)
++..++++++|.|++| ...+.+.+++|.++|++| ++++|.||+|..|.. .... .....|+ ++ +|||.+
T Consensus 239 ~~~kai~l~nP~NPTG--~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~s--l~~~~~~~vI~v~SfSK~f 312 (521)
T TIGR03801 239 PSIKALFVVNPSNPPS--VAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD--DFRS--LFAELPYNTIGVYSFSKYF 312 (521)
T ss_pred CCCcEEEEeCCCCCCC--CCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc--cccc--hhhhCCCCEEEEEcchhhc
Confidence 3344566678887777 566889999999999987 999999999987742 1111 1111232 22 589988
Q ss_pred CCcccceeEEEeChh-HHH------------HhhhccC-----------------CCCccCcCCCCCCcHHHHH-----H
Q 013204 276 SSAYMPIGAILVSPE-VSE------------VIHSQSN-----------------TLGSFSHGFTYSGHPVSCA-----V 320 (447)
Q Consensus 276 ~gg~~~~g~~~~~~~-~~~------------~~~~~~~-----------------~~~~~~~~~t~~~~~~~~~-----a 320 (447)
+..+|++|+++++++ +++ .+..... ..+.+...++.+.+...+. +
T Consensus 313 g~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a 392 (521)
T TIGR03801 313 GATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFS 392 (521)
T ss_pred cCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHH
Confidence 755599999999764 221 1110000 0001111123333322222 3
Q ss_pred HHHHHHHHhhhcHH----HHHHHHHHHHHHhHhhccCCCceeeEeee-eeEEEEEeecCCC--CCCCCCC---CcchHHH
Q 013204 321 AIEALKIYKERNIV----EQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKS--PNEPFPP---EWGIGAY 390 (447)
Q Consensus 321 a~a~l~~~~~~~~~----~~~~~~~~~l~~~L~~l~~~~~~~~~~~~-g~~~~i~~~~~~~--~~~~~~~---~~~~~~~ 390 (447)
+.+.++. .+... +.++++.+.+.+.| +.+.. ..... +.++.+++..... ....|.. .......
T Consensus 393 ~~all~~--~~~y~~~~~~~~~~R~~~l~~~L----g~~~~-~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~ 465 (521)
T TIGR03801 393 LFALMDK--ENAYKAETKDICRRREKLLFRGL----GLPLQ-EDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVD 465 (521)
T ss_pred HHHHhcc--chhHHHHHHHHHHHHHHHHHHhc----CCCCc-CCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHH
Confidence 3344431 12222 23333333333333 11111 12233 4555666653110 0000000 0001234
Q ss_pred HHHHHH-HcCceEEeeC------CEEEEecCCC-CCHHHHHHHHHHHHHHHHHHHHH
Q 013204 391 FGAQCE-KHGMLVRVSG------DNIMMSPPFI-MSPEEVDELISKYGKALKATEER 439 (447)
Q Consensus 391 ~~~~l~-~~Gi~~~~~g------~~iR~~~~~~-~t~e~i~~~~~~l~~~l~~~~~~ 439 (447)
+..+|+ +.||.+.|+. ..+|++ +. .+++++.++.++|.+.+.+..++
T Consensus 466 ~~~~L~~e~gV~v~PG~~Fg~~~~~vRis--la~l~~~~~~~~~~rl~~~~~~~~~~ 520 (521)
T TIGR03801 466 VLFRLAEETGIVLLPGGGFGGPEWSVRVS--LANLNEYDYAEIGRAIRKILDEYYEA 520 (521)
T ss_pred HHHHHHHhCCEEEeCchhcCCCCCeEEEE--ecCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 555554 6699998863 469999 54 68999999999999999877653
No 249
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.76 E-value=1.6e-16 Score=139.89 Aligned_cols=326 Identities=16% Similarity=0.126 Sum_probs=205.7
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHH
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVK 113 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~ 113 (447)
...|+-|..-+.| -.+++++|.++.-.-.. .+..+-..+|+++.++++ +++..+|++|||.+|..||+
T Consensus 22 ~~vDLRSDTvT~P----TdeMr~am~eA~vgDdV-----yGeD~tt~rLE~~vA~l~---GKEAgLFv~SGTmgNllaIm 89 (384)
T KOG1368|consen 22 RSVDLRSDTVTVP----TDEMRRAMAEASVGDDV-----YGEDPTTNRLEQRVAELF---GKEAGLFVPSGTMGNLLAIM 89 (384)
T ss_pred eccccccccccCC----hHHHHHHHhhcccCccc-----ccCCccHHHHHHHHHHHh---CccceeeecccccccHHHHH
Confidence 4577777654332 45777787776532111 224556778999999997 77889999999999999998
Q ss_pred HHHHHHHhcCCCCcceEEEEcCCCccc--hhhhhc-ccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHH
Q 013204 114 LVWYYNNALGRPNKKKFIARQKSYHGS--TLIAAS-LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190 (447)
Q Consensus 114 ~~~~~~~~~~~~~~~~vi~~~~~yhg~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (447)
.=+. .+...+|+ ....|-+ ..+.++ +++.. ..+..+ ++ -+..++
T Consensus 90 ~Hc~-------~rg~eii~-gd~~HI~~~E~gg~s~l~gv~--------------~~tv~~--------e~---dgtm~l 136 (384)
T KOG1368|consen 90 VHCH-------QRGSEIIV-GDRAHIHRYEQGGISQLAGVH--------------VRTVKN--------EN---DGTMDL 136 (384)
T ss_pred HHhc-------CCCceEEe-ccchheeehhccChhhhccce--------------eEeeee--------CC---CCeeeH
Confidence 6431 12344444 4444444 222222 11111 011100 00 011125
Q ss_pred HHHHHHHHh----hCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCC--
Q 013204 191 NNLEDLILK----EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-- 264 (447)
Q Consensus 191 ~~le~~l~~----~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~-- 264 (447)
+++|+.+.. ++...+.+|.+|......|..+.|-+|+.++.++|++||+.|++|-+.- | .+....|+
T Consensus 137 edIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi-~------NAavasgV~v 209 (384)
T KOG1368|consen 137 EDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI-F------NAAVASGVPV 209 (384)
T ss_pred HHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhh-h------hHHHHcCCCH
Confidence 888888763 2334678999999877767688899999999999999999999995422 1 11112222
Q ss_pred -----CCCe--eeecccCCCccccee-EEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHH
Q 013204 265 -----KPDL--VSFAKALSSAYMPIG-AILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQ 336 (447)
Q Consensus 265 -----~~d~--v~~sK~l~gg~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~ 336 (447)
..|- +|+||+|+. |+| ++++++++++..+..... .++-+-..-+-+++|+.+|+. ....+..
T Consensus 210 k~i~~~fDSVsiCLSKglgA---PVGSViVG~k~FI~kA~~~RKa-----lGGGmRQsGvLaaaaLval~~--~~~~L~~ 279 (384)
T KOG1368|consen 210 KKICSAFDSVSICLSKGLGA---PVGSVIVGSKDFIDKARHFRKA-----LGGGMRQSGVLAAAALVALDE--NVPLLRA 279 (384)
T ss_pred HHHHHhhhhhhhhhhccCCC---CcccEEEccHHHHHHHHHHHHH-----hcCchhHHHHHHHHHHHHhhc--chHHHHH
Confidence 2343 489999985 566 556788887765432111 122333344566777777763 2235667
Q ss_pred HHHHHHHHHHhHhhccCCCceeeEe-eeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEEEecC
Q 013204 337 VNKIAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPP 414 (447)
Q Consensus 337 ~~~~~~~l~~~L~~l~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR~~~~ 414 (447)
..++...+.+.++...+.+ ..+. -+..++.+.+....- ..+.++..+.+.|+++.++. .++|+..+
T Consensus 280 dHk~A~~lAe~~~~~~~i~--v~v~a~etNiv~~~l~q~~~----------~~~~l~~~~~k~gi~lm~~~s~r~Rivlh 347 (384)
T KOG1368|consen 280 DHKRAKELAEYINTPEEIR--VEVPAVETNIVNMVLCQARL----------TAEELCKFLEKNGILLMGGASRRIRIVLH 347 (384)
T ss_pred HHHHHHHHHHHhcccccee--eecchhhcceeeeecccccC----------CHHHHHHHHHHCCeEEeeccccceEEEEE
Confidence 7777888888777653222 2332 344555655544331 25678999999999988764 45999999
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 013204 415 FIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 415 ~~~t~e~i~~~~~~l~~~l 433 (447)
.-.|+++++.++..|.+.+
T Consensus 348 ~Qvt~~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 348 HQVTDEDVEYVKSVLSKKF 366 (384)
T ss_pred EecCHHHHHHHHHHHHHHH
Confidence 9999999999999995443
No 250
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.76 E-value=2.6e-15 Score=148.75 Aligned_cols=333 Identities=15% Similarity=0.133 Sum_probs=183.1
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHh-cCCcccc---cCcCCChHHHHHHH----HHHHhcCcCCCCeEEEeCCh
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLN-TLPFYHS---FWNRTTKPSLDLAK----ELLEMFTASKMAKVFFTNSG 104 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~-~~~~~~~---~~~~~~~~~~~l~~----~l~~~~~~~~~~~v~~~~sG 104 (447)
+..+++.++.. + -+|++.+++...+. ..+..+. ...+ .+...++++ .+++.+. .+...++ .+||
T Consensus 25 ~~~~~l~~~~n--~---~~~~v~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~la~~~g-~~~~~i~-~~sg 96 (416)
T PRK00011 25 EEHIELIASEN--F---VSPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEYVDVVEQLAIDRAKELFG-AEYANVQ-PHSG 96 (416)
T ss_pred hcCeeeecccC--c---CCHHHHHHHhchhhcccccCCCCcccccc-chHHHHHHHHHHHHHHHHhC-CCceeee-cCCc
Confidence 56788876642 2 58999999877653 2211111 1111 122333433 5666653 3333444 4578
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhh--hhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCCh
Q 013204 105 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI--AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE 182 (447)
Q Consensus 105 seA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (447)
++|+..+++.+. .++++|++..+.|.+.... .....+.. . .+..++....
T Consensus 97 t~al~~~l~~l~--------~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g-----~-----~~~~~~~~~~---------- 148 (416)
T PRK00011 97 SQANAAVYFALL--------KPGDTILGMDLAHGGHLTHGSPVNFSGKL-----Y-----NVVSYGVDEE---------- 148 (416)
T ss_pred hHHHHHHHHHhc--------CCCCEEEEeccccCCccccccccccccce-----e-----eEeecCcCcc----------
Confidence 999999888663 2347888888887554211 11111100 0 0011111000
Q ss_pred hHHHHHHHHHHHHHHHhhCCCcEEEEEE-ccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccccccc
Q 013204 183 EEYSTRLANNLEDLILKEGPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK 261 (447)
Q Consensus 183 ~~~~~~~~~~le~~l~~~~~~~~a~vi~-epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~ 261 (447)
....+++++++.+... ++.+|++ .+++ |...+ +++|.++|++||+++|+|++|. +|..+.......
T Consensus 149 --~~~~d~~~l~~~i~~~---~~k~v~~~~~~~---~~~~~----~~~I~~la~~~~~~livD~a~~-~g~~~~g~~~~~ 215 (416)
T PRK00011 149 --TGLIDYDEVEKLALEH---KPKLIIAGASAY---SRPID----FKRFREIADEVGAYLMVDMAHI-AGLVAAGVHPSP 215 (416)
T ss_pred --cCCcCHHHHHHHHHhc---CCCEEEECCCcC---CCccC----HHHHHHHHHHcCCEEEEECcch-hcccccCccCCC
Confidence 0112247788777531 3345555 3333 33334 8999999999999999999985 333321110111
Q ss_pred CCCCCCee--eecccCCCcccceeEEEeC-hhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHH-HHHhh--hcHHH
Q 013204 262 YSIKPDLV--SFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEAL-KIYKE--RNIVE 335 (447)
Q Consensus 262 ~~~~~d~v--~~sK~l~gg~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l-~~~~~--~~~~~ 335 (447)
.+ ..|++ +++|+++| ++.|+++++ +++.+.+.... ..+...++....+++...++ +.+++ ++..+
T Consensus 216 ~~-~~di~~~S~~K~l~g--~~gg~i~~~~~~~~~~l~~~~------~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~ 286 (416)
T PRK00011 216 VP-HADVVTTTTHKTLRG--PRGGLILTNDEELAKKINSAV------FPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQ 286 (416)
T ss_pred CC-CCcEEEecCCcCCCC--CCceEEEeCCHHHHHHHHHHh------CccccCCccHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 12 35766 46799965 678899985 68888776321 11111112222333333333 33221 44667
Q ss_pred HHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEe----e------
Q 013204 336 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV----S------ 405 (447)
Q Consensus 336 ~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~------ 405 (447)
+.+++.+++++.|+++ +..+.. -...+.++.+.+.+... ....+.+.|.++||.+.. .
T Consensus 287 ~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~i~~~~~~~----------~~~~~~~~L~~~GI~v~~~~~p~~~~~~~ 354 (416)
T PRK00011 287 QVVKNAKALAEALAER-GFRVVS-GGTDNHLVLVDLRSKGL----------TGKEAEAALEEANITVNKNAVPFDPRSPF 354 (416)
T ss_pred HHHHHHHHHHHHHHhC-CCeeee-cCCCCeEEEEeCcccCC----------CHHHHHHHHHHcCcEEccCcCCCCCCCCC
Confidence 8888888999988875 222211 01223455555532210 134577888899999873 1
Q ss_pred -CCEEEEecC----CCCCHHHHHHHHHHHHHHHHH
Q 013204 406 -GDNIMMSPP----FIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 406 -g~~iR~~~~----~~~t~e~i~~~~~~l~~~l~~ 435 (447)
...+|++.. ..++++|++++++.|++++..
T Consensus 355 ~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 355 VTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred CCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 235898642 257899999999999988755
No 251
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.75 E-value=1.3e-15 Score=150.26 Aligned_cols=333 Identities=19% Similarity=0.142 Sum_probs=182.0
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHh-cCCccc--ccCcCCChHH---HHHH-HHHHHhcCcCCCCeEEEeCChh
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLN-TLPFYH--SFWNRTTKPS---LDLA-KELLEMFTASKMAKVFFTNSGS 105 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~-~~~~~~--~~~~~~~~~~---~~l~-~~l~~~~~~~~~~~v~~~~sGs 105 (447)
+++|.+..+.. .-+|++++++.+.+. ...... .......+.. .+.+ +.+.+++. .+...+ +.+||+
T Consensus 19 ~~~~~~~~~~~-----~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g-~~~~~v-~~~sgt 91 (402)
T cd00378 19 RETLELIASEN-----FTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFG-AEYANV-QPHSGS 91 (402)
T ss_pred HhCeeeeccCC-----cCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhC-CCceee-ecCCcH
Confidence 55777765542 248999999987652 321111 1111112222 2322 33445553 333334 445799
Q ss_pred hHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh----hcccCCccccCCCCCCCCcceecCCCCcccCCCCCCC
Q 013204 106 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA----ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 181 (447)
Q Consensus 106 eA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (447)
+|+..++..+. ..+++|++.++.|.+..... +...|.. +..++++.. +
T Consensus 92 ~a~~~~l~~l~--------~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~------------~~~~~~~~~-----~--- 143 (402)
T cd00378 92 QANLAVYFALL--------EPGDTIMGLDLSHGGHLTHGSFTKVSASGKL------------FESVPYGVD-----P--- 143 (402)
T ss_pred HHHHHHHHHhc--------CCCCEEEEecCccCcccccccccccccccee------------EEEecCCcC-----c---
Confidence 99999998764 23478999898886553211 1111100 011111100 0
Q ss_pred hhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhh-cCCCcccc-cccc
Q 013204 182 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI-CAFGRLGT-MFGC 259 (447)
Q Consensus 182 ~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~-~g~g~~g~-~~~~ 259 (447)
+ ....+++++++.+... +...++++.+.++ ...+ +++|.++|++||+++|+||+| .|+...|. ....
T Consensus 144 -~-~~~id~~~l~~~i~~~--~~~~v~~~~~~~~---~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~ 212 (402)
T cd00378 144 -E-TGLIDYDALEKMALEF--KPKLIVAGASAYP---RPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPL 212 (402)
T ss_pred -c-cCCcCHHHHHHHHHhC--CCCEEEecCcccC---CCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcc
Confidence 0 0011247777777532 2223344455443 3333 899999999999999999996 44322221 1111
Q ss_pred ccCCCCCCee--eecccCCCcccceeEEEeCh-hHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh---hhcH
Q 013204 260 DKYSIKPDLV--SFAKALSSAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK---ERNI 333 (447)
Q Consensus 260 ~~~~~~~d~v--~~sK~l~gg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~---~~~~ 333 (447)
. ..|++ +++|+++| ++.|++++++ ++++.+.... ......+..+..++++..++.... -++.
T Consensus 213 ~----~~dv~~~s~sK~l~G--~~gg~i~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~ 280 (402)
T cd00378 213 P----GADVVTTTTHKTLRG--PRGGLILTRKGELAKKINSAV------FPGLQGGPHLHVIAAKAVALKEALEPEFKAY 280 (402)
T ss_pred c----CCcEEEeccccCCCC--CCceEEEeccHHHHHHHHHHh------CccccCCchHHHHHHHHHHHHHHhhHHHHHH
Confidence 1 34765 46799954 6889999876 8888775321 001111112223333233333222 2345
Q ss_pred HHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEe---------
Q 013204 334 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV--------- 404 (447)
Q Consensus 334 ~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~--------- 404 (447)
.+++.++.+++++.|+++ +..+.. ....+.++.+.+..... ....+.+.|.++||.+.+
T Consensus 281 ~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~v~v~~~~~~~----------~~~~~~~~l~~~gI~v~~~~~p~~~~~ 348 (402)
T cd00378 281 AKQVVENAKALAEALKER-GFKVVS-GGTDNHLVLVDLRPKGI----------TGKAAEDALEEAGITVNKNTLPWDPSS 348 (402)
T ss_pred HHHHHHHHHHHHHHHHhC-CCeEee-cCCCCeEEEEeCCccCC----------CHHHHHHHHHHcCcEEcCCcCCCCCCC
Confidence 677778888888888775 322221 11235555666653211 123466778888999963
Q ss_pred --eCCEEEEecCCC----CCHHHHHHHHHHHHHHHHH
Q 013204 405 --SGDNIMMSPPFI----MSPEEVDELISKYGKALKA 435 (447)
Q Consensus 405 --~g~~iR~~~~~~----~t~e~i~~~~~~l~~~l~~ 435 (447)
....+|++++.. ++++||+++++.|++++++
T Consensus 349 ~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 349 PFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred CCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 124699987653 4799999999999998764
No 252
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.75 E-value=1.4e-15 Score=147.34 Aligned_cols=305 Identities=15% Similarity=0.149 Sum_probs=182.8
Q ss_pred HHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcC
Q 013204 56 AAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 135 (447)
Q Consensus 56 ~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~ 135 (447)
+++.+.+....+ ...+...++++.+++++. .+++++++||++|+..+++.+. . ..+++|++..+
T Consensus 3 ~~~~~~~~~~~~------~~~~~~~~~~~~la~~~~---~~~~~~~~sgt~al~~~l~~l~------~-~~gd~vl~~~~ 66 (352)
T cd00616 3 EAVEEVLDSGWL------TLGPKVREFEKAFAEYLG---VKYAVAVSSGTAALHLALRALG------I-GPGDEVIVPSF 66 (352)
T ss_pred HHHHHHHHcCCc------cCCHHHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHcC------C-CCCCEEEeCCc
Confidence 455555554322 134568899999999973 4579999999999999998762 1 23478888888
Q ss_pred CCccchhhhhcccCCccccCCCCCCCCcceecCCCC-cccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEcccc
Q 013204 136 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI 214 (447)
Q Consensus 136 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~ 214 (447)
.||+........ |... ..++... .+ ..+++++++.+. +++++|++.+.
T Consensus 67 ~~~~~~~~~~~~-g~~~------------~~~~~~~~~~-------------~~d~~~l~~~i~----~~~~~v~~~~~- 115 (352)
T cd00616 67 TFVATANAILLL-GATP------------VFVDIDPDTY-------------NIDPELIEAAIT----PRTKAIIPVHL- 115 (352)
T ss_pred chHHHHHHHHHc-CCeE------------EEEecCCCcC-------------CcCHHHHHHhcC----cCCeEEEEECC-
Confidence 888765433322 2111 1111110 00 011366666553 34566666543
Q ss_pred CCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec----ccCCCcccceeEEEeC-h
Q 013204 215 GAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAILVS-P 289 (447)
Q Consensus 215 ~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s----K~l~gg~~~~g~~~~~-~ 289 (447)
.|...+ +++|.++|++||+++|+|++|+ +|.... ....+...|+.++| |.+++| ..|+++.+ +
T Consensus 116 --~G~~~~----~~~i~~l~~~~~i~li~D~a~~-~g~~~~---~~~~~~~~d~~~~S~~~~K~~~~~--~gg~~~~~~~ 183 (352)
T cd00616 116 --YGNPAD----MDAIMAIAKRHGLPVIEDAAQA-LGATYK---GRKVGTFGDAGAFSFHPTKNLTTG--EGGAVVTNDE 183 (352)
T ss_pred --CCCcCC----HHHHHHHHHHcCCeEEEECCCC-CCCeEC---CEEcccCcceeEEcCCCCCCCccc--CceEEEECCH
Confidence 455554 8999999999999999999997 433211 11223335777765 988653 45666665 5
Q ss_pred hHHHHhhhccCCCC--------ccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEe
Q 013204 290 EVSEVIHSQSNTLG--------SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR 361 (447)
Q Consensus 290 ~~~~~~~~~~~~~~--------~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~ 361 (447)
++.+.+........ ....+.++..+++.++.++..++.+ ++..++.+++.+++++.|+++.+..++....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~ 261 (352)
T cd00616 184 ELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKL--DEIIARRREIAERYKELLADLPGIRLPDVPP 261 (352)
T ss_pred HHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCCCCccCCCCCC
Confidence 77665542110000 0011123344566666666555433 4456777888888988888764433322211
Q ss_pred ---eeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee----------------------------CCEEE
Q 013204 362 ---GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------------------GDNIM 410 (447)
Q Consensus 362 ---~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------------------------g~~iR 410 (447)
....++.+.+...... ....+.+.|.++||.+... .+.+|
T Consensus 262 ~~~~~~~~~~~~~~~~~~~---------~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~ 332 (352)
T cd00616 262 GVKHSYHLYVIRLDPEAGE---------SRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLS 332 (352)
T ss_pred CCceeeEEEEEEECCcCCC---------CHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEE
Confidence 1233445555421000 1456888999999976521 03699
Q ss_pred EecCCCCCHHHHHHHHHHHH
Q 013204 411 MSPPFIMSPEEVDELISKYG 430 (447)
Q Consensus 411 ~~~~~~~t~e~i~~~~~~l~ 430 (447)
++++..+|++||++++++|+
T Consensus 333 l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 333 LPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred ccCCCCCCHHHHHHHHHHhC
Confidence 99999999999999999874
No 253
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.75 E-value=5e-16 Score=150.03 Aligned_cols=291 Identities=15% Similarity=0.098 Sum_probs=160.9
Q ss_pred ChHHHHHHHHHHHhcCcC-CCCeEEEeCChhhHHHHHHHHHHHHHHh----cC-CCCcceEEEEcCCCccchhhhhcccC
Q 013204 76 TKPSLDLAKELLEMFTAS-KMAKVFFTNSGSEANDTQVKLVWYYNNA----LG-RPNKKKFIARQKSYHGSTLIAASLSG 149 (447)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~-~~~~v~~~~sGseA~~~Al~~~~~~~~~----~~-~~~~~~vi~~~~~yhg~~~~~~~~~~ 149 (447)
.+...++++++.+++... ....++|++||++|+..++..++..... .+ .++.+.+|+.+..+|.+........+
T Consensus 37 ~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g 116 (345)
T cd06450 37 TEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLD 116 (345)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHh
Confidence 344445555666665322 3357999999999999999987642111 00 12234466667777776543333222
Q ss_pred CccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhh--CCCcEEEEEEccccCCCCCccCChhHH
Q 013204 150 LPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYF 227 (447)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~a~vi~epv~~~~G~~~~~~~~l 227 (447)
... ..++....+ ..++++|++.+... ...++.+|++...++..|.+.+ +
T Consensus 117 ~~~------------~~v~~~~~~-------------~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~----~ 167 (345)
T cd06450 117 VKV------------RLVPVDEDG-------------RMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----L 167 (345)
T ss_pred cCe------------EEeeeCCCC-------------CcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC----H
Confidence 111 112211100 11247777777531 1113445555544555666655 9
Q ss_pred HHHHHHHHhcCCEEEEehhhcCCCccccccccccCCC-CCCeee--ecccCCCcccceeEEEeChhHHHHhhhccCCCCc
Q 013204 228 EKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 304 (447)
Q Consensus 228 ~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~-~~d~v~--~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~ 304 (447)
++|.++|++||+++|+|++|.++............+. ..|.++ ++|.++++ .++|+++.+
T Consensus 168 ~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p-~g~g~~~~~---------------- 230 (345)
T cd06450 168 EEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVP-LGCSAVLVR---------------- 230 (345)
T ss_pred HHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCC-cchHHHHHH----------------
Confidence 9999999999999999999975422111100001111 357554 56977765 466655433
Q ss_pred cCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCC
Q 013204 305 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPE 384 (447)
Q Consensus 305 ~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~ 384 (447)
.+++.+++..+....-++..++..++.+++++.|+++....++ ....+.++.+.+.......
T Consensus 231 ----------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~iv~f~~~~~~~~~------ 292 (345)
T cd06450 231 ----------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELL--GEPNLSLVCFRLKPSVKLD------ 292 (345)
T ss_pred ----------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--cCCceeEEEEEECCcchhh------
Confidence 2233333333322112345566677777888777765322221 1123445555554310000
Q ss_pred cchHHHHHHHHHHcCceEEee-----CCEEEEecCCCC-CHHHHHHHHHHHHH
Q 013204 385 WGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIM-SPEEVDELISKYGK 431 (447)
Q Consensus 385 ~~~~~~~~~~l~~~Gi~~~~~-----g~~iR~~~~~~~-t~e~i~~~~~~l~~ 431 (447)
.....+.++|.++|+++.+. +..+|+++...+ |++|++++++.|++
T Consensus 293 -~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 293 -ELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred -HHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 02345888899986554432 256999998765 99999999999875
No 254
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=3.9e-15 Score=140.35 Aligned_cols=326 Identities=17% Similarity=0.218 Sum_probs=206.7
Q ss_pred CCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcce
Q 013204 50 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 129 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~ 129 (447)
-+|+|++||.+..-. +.+.. -.....++.+.+...+...+.+-+++..||+.|+|+|+..+. .+.++
T Consensus 16 v~~~V~~am~~~~~~--h~s~~---F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~--------~pgdk 82 (383)
T COG0075 16 VPPRVLLAMARPMVG--HRSPD---FVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLV--------EPGDK 82 (383)
T ss_pred CCHHHHHHhcCCCCC--CCCHH---HHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhcc--------CCCCe
Confidence 467787777665432 11111 134456677777777743333567777899999999999764 44688
Q ss_pred EEEEcCCCccchhhhhccc-CCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEE
Q 013204 130 FIARQKSYHGSTLIAASLS-GLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF 208 (447)
Q Consensus 130 vi~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~v 208 (447)
|+++.++..|..+.-+... |.... .+.++ | ++. .+++++++.+.+. +.+.+|
T Consensus 83 VLv~~nG~FG~R~~~ia~~~g~~v~------------~~~~~--w-----g~~------v~p~~v~~~L~~~--~~~~~V 135 (383)
T COG0075 83 VLVVVNGKFGERFAEIAERYGAEVV------------VLEVE--W-----GEA------VDPEEVEEALDKD--PDIKAV 135 (383)
T ss_pred EEEEeCChHHHHHHHHHHHhCCceE------------EEeCC--C-----CCC------CCHHHHHHHHhcC--CCccEE
Confidence 9998888888754444322 11110 01110 0 000 0138888888742 345556
Q ss_pred EEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccceeEEE
Q 013204 209 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAIL 286 (447)
Q Consensus 209 i~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~g~~~ 286 (447)
.+-.+-.++|.+.| +++|+++|++||+++|+|-|-+ +|- ..+-.+.||+ |+++ -.|+++++ .++|++.
T Consensus 136 ~~vH~ETSTGvlnp----l~~I~~~~k~~g~l~iVDaVsS-~Gg--~~~~vd~wgi--Dv~itgSQK~l~~P-PGla~v~ 205 (383)
T COG0075 136 AVVHNETSTGVLNP----LKEIAKAAKEHGALLIVDAVSS-LGG--EPLKVDEWGI--DVAITGSQKALGAP-PGLAFVA 205 (383)
T ss_pred EEEeccCcccccCc----HHHHHHHHHHcCCEEEEEeccc-CCC--cccchhhcCc--cEEEecCchhccCC-CccceeE
Confidence 66666666777877 9999999999999999999876 543 2444555565 6654 45999998 7899999
Q ss_pred eChhHHHHhhhccCCCC--------ccC---cCCCCCCcHHHHHHHHHHHHHHhhhc---HHHHHHHHHHHHHHhHhhcc
Q 013204 287 VSPEVSEVIHSQSNTLG--------SFS---HGFTYSGHPVSCAVAIEALKIYKERN---IVEQVNKIAPKFQDGVKAFS 352 (447)
Q Consensus 287 ~~~~~~~~~~~~~~~~~--------~~~---~~~t~~~~~~~~~aa~a~l~~~~~~~---~~~~~~~~~~~l~~~L~~l~ 352 (447)
.+++..+.+.......- .+. ..+.++++.-.+.+..++|+.+.+++ ..++-+.+.+.+++.++++
T Consensus 206 ~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al- 284 (383)
T COG0075 206 VSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL- 284 (383)
T ss_pred ECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-
Confidence 99999888876432200 001 22344444445566668888887765 4566677778888888877
Q ss_pred CCCceeeE-eeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEee-----CCEEEEecCCCCCHHHHHHH
Q 013204 353 DSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-----GDNIMMSPPFIMSPEEVDEL 425 (447)
Q Consensus 353 ~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-----g~~iR~~~~~~~t~e~i~~~ 425 (447)
+.....+. ...-.+..+..+.... ...+...++ +.|+.+.++ |..+||...-..+.+++..+
T Consensus 285 Gl~~~~~~~~~s~tvta~~~P~g~~-----------~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~ 353 (383)
T COG0075 285 GLELFADPERRSPTVTAIKVPEGVD-----------DKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAA 353 (383)
T ss_pred CCccccCcccCCCceEEEECCCCCC-----------cHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHH
Confidence 32222211 2222344444443321 112333455 458877755 36799999999999999999
Q ss_pred HHHHHHHHHHHH
Q 013204 426 ISKYGKALKATE 437 (447)
Q Consensus 426 ~~~l~~~l~~~~ 437 (447)
+.+|+.+|.++.
T Consensus 354 l~ale~~L~~~g 365 (383)
T COG0075 354 LAALEAALRELG 365 (383)
T ss_pred HHHHHHHHHHcC
Confidence 999999998763
No 255
>PLN02368 alanine transaminase
Probab=99.73 E-value=1.2e-15 Score=149.26 Aligned_cols=250 Identities=15% Similarity=0.098 Sum_probs=154.3
Q ss_pred CChHHHHHHHHHHHhcC-cCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccc
Q 013204 75 TTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL 153 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 153 (447)
..+....+++.+.+.+. ...+++|++++|+++++..++..+. . ..++.|++.+|+|..+.......++...
T Consensus 109 ~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~------~-~pGd~Vli~~P~Y~~y~~~~~~~g~~~v- 180 (407)
T PLN02368 109 LPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVI------R-GEKDGVLVPVPQYPLYSATISLLGGTLV- 180 (407)
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHc------C-CCCCEEEEeCCCCccHHHHHHHcCCEEE-
Confidence 34455555555544422 2467799999999999999988653 1 2357899999999988655544333221
Q ss_pred cCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCC---CcEEEEEEccccCCCCCccCChhHHHHH
Q 013204 154 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP---ETIAAFIAEPVIGAGGVIPPPATYFEKV 230 (447)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~---~~~a~vi~epv~~~~G~~~~~~~~l~~l 230 (447)
.+++... +.+ ..+++++++.+..... +..++++++|.|++| .+.+.+.+++|
T Consensus 181 ------------~v~~~~~----------~~~-~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG--~v~s~e~l~~l 235 (407)
T PLN02368 181 ------------PYYLEES----------ENW-GLDVNNLRQSVAQARSKGITVRAMVIINPGNPTG--QCLSEANLREI 235 (407)
T ss_pred ------------EEecccc----------cCC-CCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCC--ccCCHHHHHHH
Confidence 1111000 000 0113777777653211 233467777866665 56689999999
Q ss_pred HHHHHhcCCEEEEehhhcCCCcccc-cc-c-cccC-CC------CCCee---eecccC-CCcccceeEEEe---ChhHHH
Q 013204 231 QAVVKKYDILFIADEVICAFGRLGT-MF-G-CDKY-SI------KPDLV---SFAKAL-SSAYMPIGAILV---SPEVSE 293 (447)
Q Consensus 231 ~~l~~~~g~~li~DEv~~g~g~~g~-~~-~-~~~~-~~------~~d~v---~~sK~l-~gg~~~~g~~~~---~~~~~~ 293 (447)
.++|++||+++|.||+|..+...+. .+ . .+.. ++ .+.++ +|||.+ +..++|+|++++ ++++++
T Consensus 236 ~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~ 315 (407)
T PLN02368 236 LKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVE 315 (407)
T ss_pred HHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHH
Confidence 9999999999999999998754442 22 1 1110 11 12333 579998 434499999984 788888
Q ss_pred HhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHH-----------Hhh-hcHHHHHHHHHHHHHHhHhhccCCCceeeEe
Q 013204 294 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-----------YKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR 361 (447)
Q Consensus 294 ~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~-----------~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~ 361 (447)
.+... ...+++.+.+++.++.++++. .++ .++.+.++++.+.+.+.|+++ +.+....
T Consensus 316 ~~~~~--------~~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~---~g~~~~~ 384 (407)
T PLN02368 316 EIYKV--------ASIALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSC---KNVVCNF 384 (407)
T ss_pred HHHHH--------hcccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCeEeCC
Confidence 87631 112456677888888887752 111 224456666667777777665 3444556
Q ss_pred eeeeEEE
Q 013204 362 GTGLILG 368 (447)
Q Consensus 362 ~~g~~~~ 368 (447)
.+|.|+.
T Consensus 385 P~Gafy~ 391 (407)
T PLN02368 385 TEGAMYS 391 (407)
T ss_pred CCeeeEe
Confidence 6776654
No 256
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.73 E-value=8.3e-15 Score=146.65 Aligned_cols=345 Identities=14% Similarity=0.087 Sum_probs=190.9
Q ss_pred CCCHHHHHHHHHHHhcCCcccc-----cCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcC
Q 013204 49 GSEPRLVAAATAQLNTLPFYHS-----FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 123 (447)
Q Consensus 49 ~~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~ 123 (447)
|.+|.+.+++.+...-. .++. ...+..+...++.+.+++++. .+ ...++.++|+.+...++.+++.+....|
T Consensus 81 ~~~p~i~~~~~~~~~~~-~~tpYq~e~~sqG~lel~~~~~~~la~l~G-~~-~~~l~~~~GA~a~~~~l~~~r~~~~~~G 157 (481)
T PRK04366 81 KYNPKINEKVARLPGFA-ELHPLQPEETVQGALELMYELQEWLKEITG-MD-AVTLQPAAGAHGELTGLLMIRAYHEARG 157 (481)
T ss_pred CCCHHHHHHHHhCcchh-cCCCCCChhhhhHHHHHHHHHHHHHHHHhC-CC-ceEEEeCcHHHHHHHHHHHHHHHhhccC
Confidence 46788888887752211 1111 122334555677778887763 22 2344446777777665554443322333
Q ss_pred CCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCC
Q 013204 124 RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPE 203 (447)
Q Consensus 124 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~ 203 (447)
+.++++|++.++.|+.+. ......|.. +..+++...+. .++++|++.+. +
T Consensus 158 d~~~~~Vlv~~~~hp~~~-~~~~~~G~~------------vv~v~~~~~~~-------------~D~e~L~~~i~---~- 207 (481)
T PRK04366 158 DTKRTEVIVPDSAHGTNP-ASAAMAGFK------------VVEIPSNEDGL-------------VDLEALKAAVG---E- 207 (481)
T ss_pred cCCCCEEEEcCCccHhHH-HHHHHcCCE------------EEEeecCCCCC-------------cCHHHHHhhcc---c-
Confidence 324567888777554443 333222221 11222211111 11366766664 2
Q ss_pred cEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCC----C
Q 013204 204 TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALS----S 277 (447)
Q Consensus 204 ~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~----g 277 (447)
++++|++...++ .|.+ ...+++|.++|+++|+++++|+++. .+..|.. .... ...|+++++ |.|+ .
T Consensus 208 ~t~~V~v~~Pn~-tG~~---~~dl~eI~~~a~~~gal~iVD~a~~-~~~~g~~-~~~~--~GaD~~~~~~hK~l~~P~g~ 279 (481)
T PRK04366 208 DTAALMLTNPNT-LGLF---ERNILEIAEIVHEAGGLLYYDGANL-NAILGKA-RPGD--MGFDVVHLNLHKTFSTPHGG 279 (481)
T ss_pred CCeEEEEeCCCC-cccc---chHHHHHHHHHHHcCCEEEEEecCh-hhhcccC-Cccc--cCCCEEEEechhhcCCCCCC
Confidence 445555554444 4543 1239999999999999999999985 3223311 1122 236888763 8765 2
Q ss_pred cccceeEEEeChhHHHHhhhc-----cCC-------CCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHH---HHHHHHHH
Q 013204 278 AYMPIGAILVSPEVSEVIHSQ-----SNT-------LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV---EQVNKIAP 342 (447)
Q Consensus 278 g~~~~g~~~~~~~~~~~~~~~-----~~~-------~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~---~~~~~~~~ 342 (447)
|+..+|++.+++++.+.+... ... .......-.++++.+.+.+++..+..+..+++. ++...+.+
T Consensus 280 Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~ 359 (481)
T PRK04366 280 GGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNAN 359 (481)
T ss_pred CCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 336778888888877766311 000 000001112233445556666666666555443 44566788
Q ss_pred HHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEe------eCCEEEEecCCC
Q 013204 343 KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV------SGDNIMMSPPFI 416 (447)
Q Consensus 343 ~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~------~g~~iR~~~~~~ 416 (447)
++++.|.++ ..+....... ..+.+.+..-.... .....+.++|.++|+.... ..+.+|+++...
T Consensus 360 ~l~~~L~~~--~~~~~~~~~~-~~~~~~~~~~~~~g-------~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~ 429 (481)
T PRK04366 360 YLKARLKDI--YDLPYDRPCM-HEFVLSGKKLKETG-------VRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTET 429 (481)
T ss_pred HHHHHhHhh--CcccCCCCee-EEEEEECccccccC-------CCHHHHHHHHHHCCccCCccccccccCCeEEEcccCC
Confidence 889888875 1211110000 01112211000000 0145688999999998651 135799999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013204 417 MSPEEVDELISKYGKALKATEERVKELK 444 (447)
Q Consensus 417 ~t~e~i~~~~~~l~~~l~~~~~~~~~~~ 444 (447)
+|++|||++++.|+++.+++.++.+.+|
T Consensus 430 ~t~edid~l~~~l~~i~~~~~~~~~~~~ 457 (481)
T PRK04366 430 ESKETLDAFIAAMKQIAEEAKENPELVK 457 (481)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCcHhHh
Confidence 9999999999999999998887655544
No 257
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=6.7e-15 Score=129.87 Aligned_cols=311 Identities=16% Similarity=0.158 Sum_probs=178.4
Q ss_pred cCCChHHHHHHHHHHHhcCcC-CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCc
Q 013204 73 NRTTKPSLDLAKELLEMFTAS-KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP 151 (447)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~-~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 151 (447)
.+.......+++.+.+.+.++ ....+.+|++.-.|.--+..+. .-.+..| +.+..++-+.|.|-|+....+.-.-..
T Consensus 74 QG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF-~G~~sdG-~~k~illPLaPeYiGY~d~~l~~d~fV 151 (417)
T COG3977 74 QGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLF-AGRRSDG-TEKKILLPLAPEYIGYADAGLEEDLFV 151 (417)
T ss_pred cchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHh-cCccCCC-cceeEeeccChhhccccccccCcccee
Confidence 345566677888888887653 4457777775544443333332 1111112 123455557889988865544433233
Q ss_pred cccCCCCCCC--CcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHH
Q 013204 152 ALHQKFDLPA--PFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEK 229 (447)
Q Consensus 152 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~ 229 (447)
.+++.+.... .+-+++|+ +.|+- .+.+.+|++.-..+.+|. +.+++++.+
T Consensus 152 s~kP~iel~~~g~FKY~vDF---------------------~~l~i------~e~~g~ic~SRPtNPTGN-VlTdeE~~k 203 (417)
T COG3977 152 SAKPNIELLPAGQFKYHVDF---------------------EHLHI------GESTGAICVSRPTNPTGN-VLTDEELAK 203 (417)
T ss_pred eccCCcccccccceeeccCH---------------------HHccc------ccccceEEecCCCCCCCC-cccHHHHHH
Confidence 3443332221 11122221 32221 256778888766555554 568899999
Q ss_pred HHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee-e--ecc-cCCCcccceeEEEeChhHHHHhhhccCCCCcc
Q 013204 230 VQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV-S--FAK-ALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF 305 (447)
Q Consensus 230 l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v-~--~sK-~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~ 305 (447)
|..++++||++||+|.+|. .-..+-.|.-...-..++++ | +|| ++.| .++|.+++++++++.+..-
T Consensus 204 ldalA~~~giPliIDnAYg-~PFP~iifsd~~~~w~~NiilC~SLSK~GLPG--~R~GIiIane~viqaitnm------- 273 (417)
T COG3977 204 LDALARQHGIPLIIDNAYG-VPFPGIIFSDATPLWNENIILCMSLSKLGLPG--SRCGIIIANEKVIQAITNM------- 273 (417)
T ss_pred HHHHhhhcCCcEEEecccC-CCCCceecccccccCCCCEEEEeehhhcCCCC--cceeEEEccHHHHHHHHhc-------
Confidence 9999999999999999874 32332222111111235554 4 467 6666 7999999999999988632
Q ss_pred CcCCCCCCcHHHHHHHHHHHH-----HHhhhcHHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeE-EEEEeecCCCCC
Q 013204 306 SHGFTYSGHPVSCAVAIEALK-----IYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLI-LGTEFADNKSPN 378 (447)
Q Consensus 306 ~~~~t~~~~~~~~~aa~a~l~-----~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~-~~i~~~~~~~~~ 378 (447)
....+..+..++.+.+...++ .+.++-++..++.+.+...+.|+.. +..+.. --+++|.+ +++.|.+-+-+
T Consensus 274 n~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~-iHkpEGAIFlWLWf~dLPIt- 351 (417)
T COG3977 274 NGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCL-IHKPEGAIFLWLWFKDLPIT- 351 (417)
T ss_pred cceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcccee-eecCCcceeehhhhccCCCC-
Confidence 111222333333333333332 1111112233344444444444332 333322 22456654 44555543322
Q ss_pred CCCCCCcchHHHHHHHHHHcCceEEeeC--------------CEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 379 EPFPPEWGIGAYFGAQCEKHGMLVRVSG--------------DNIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 379 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~g--------------~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
.+.++++|+++|+++.|+. ..+|++ +.-++++|+..+.+|.+.+++.
T Consensus 352 ---------t~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn--~~~~~~~ie~Gva~lae~ve~~ 412 (417)
T COG3977 352 ---------TEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMN--YVPEPEKIEKGVAILAEEVERA 412 (417)
T ss_pred ---------HHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEe--cCCCHHHHHHHHHHHHHHHHHH
Confidence 5679999999999999762 569999 8999999999999998887654
No 258
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.72 E-value=1.3e-15 Score=142.87 Aligned_cols=349 Identities=17% Similarity=0.180 Sum_probs=190.7
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCCc-cccc-CcCCChH-HHHHHHHHHHhcCcCCCCeEEEeCChhhHHH
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSF-WNRTTKP-SLDLAKELLEMFTASKMAKVFFTNSGSEAND 109 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~-~~~~~~~-~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~ 109 (447)
-.|+|..+. |..+|.|.+|+.+....+.. .++. .+.-.+. ..+-.+.++++. +.+..+|+||+++||+|.
T Consensus 44 ~vyld~~at------~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI-nAd~~dIiFts~ATEs~N 116 (428)
T KOG1549|consen 44 PVYLDNQAT------GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI-NADPSDIVFTSGATESNN 116 (428)
T ss_pred cEEEecCcC------CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh-CCCCCcEEEeCCchHHHH
Confidence 478887544 56899999999998876432 2222 1122233 333445555555 445556999999999999
Q ss_pred HHHHH-HHHHHHhcCCCCcceEEEEcCCCccchhh---hhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHH
Q 013204 110 TQVKL-VWYYNNALGRPNKKKFIARQKSYHGSTLI---AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 185 (447)
Q Consensus 110 ~Al~~-~~~~~~~~~~~~~~~vi~~~~~yhg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (447)
.+++. .|.++ +..++.||.+. .-|.+... ++...| ..+..+|+++.
T Consensus 117 lvl~~v~~~~~----~~~~k~iitl~-~eH~~v~~s~~~l~~~g------------~~Vt~lpv~~~------------- 166 (428)
T KOG1549|consen 117 LVLKGVARFFG----DKTKKHIITLQ-TEHPCVLDSCRALQEEG------------LEVTYLPVEDS------------- 166 (428)
T ss_pred HHHHHhhcccc----ccccceEEEec-ccCcchhHHHHHHHhcC------------eEEEEeccCcc-------------
Confidence 99994 44442 11123555554 44554322 222222 12233444321
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCC
Q 013204 186 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK 265 (447)
Q Consensus 186 ~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~ 265 (447)
...+++.+++.+. .++.+|.+..++++.|...| +++|.++|+++++.+++|.+|. .|.. -.+.-.+.
T Consensus 167 ~~~d~~~~~~~i~----~~T~lv~I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa-vG~i----~vDV~eln 233 (428)
T KOG1549|consen 167 GLVDISKLREAIR----SKTRLVSIMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA-VGKI----PVDVQELN 233 (428)
T ss_pred ccccHHHHHHhcC----CCceEEEEEecccCcccccc----HHHHHHHhCcCCcEEEeehhhh-cCCc----cccHHHcC
Confidence 1122466666665 47889999999999999999 9999999999999999999997 5543 23444567
Q ss_pred CCeeeec--ccCCCcccceeEEEeChh---HH-HHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh--cHHHHH
Q 013204 266 PDLVSFA--KALSSAYMPIGAILVSPE---VS-EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER--NIVEQV 337 (447)
Q Consensus 266 ~d~v~~s--K~l~gg~~~~g~~~~~~~---~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~--~~~~~~ 337 (447)
+|+++++ |.++- .++|++++++. +. ......+.+.+.+..++.-.+..++.- ++.++.... .....+
T Consensus 234 ~D~~s~s~HK~ygp--~~iGaLYvr~~~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~g---sA~e~~~~~~~~~~~~~ 308 (428)
T KOG1549|consen 234 ADFLSISAHKIYGP--PGIGALYVRRKRPRLRVEPPLSGGGQERGLRSGTVATPLAVGLG---SAAEFVNKEMAYDEAII 308 (428)
T ss_pred chheeeecccccCC--CcceEEEEccCCCcccccCcccCCccccccccCCcCchhhhhhH---HHHHHHHhhcchhHHHH
Confidence 8999887 76664 45999999872 11 111111112222232222233333333 334443321 122333
Q ss_pred HHHHHHHHHhHh-hccCCCceee-EeeeeeEEEEEee------------cCCCCCCCCCCCcchHHHHHHHHHHcCceEE
Q 013204 338 NKIAPKFQDGVK-AFSDSPIIGE-IRGTGLILGTEFA------------DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR 403 (447)
Q Consensus 338 ~~~~~~l~~~L~-~l~~~~~~~~-~~~~g~~~~i~~~------------~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~ 403 (447)
.+....+...+. .+....+.+. ..-...+..+.+. .-..+..+.+.... ..-...++..|.-..
T Consensus 309 ~~~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~--~epsy~l~~~G~~~~ 386 (428)
T KOG1549|consen 309 KRLSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSAS--LEPSYVLRAIGVDED 386 (428)
T ss_pred HHHHHHHHHHHhhhCchhhccCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCC--CCcchhhhhcCcchh
Confidence 333344443332 1211000000 0001111122222 11111111110000 011233555666444
Q ss_pred eeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 404 VSGDNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 404 ~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
.....|||+.-..++++|++++++.+.+.++.++.
T Consensus 387 ~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~ 421 (428)
T KOG1549|consen 387 LAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLRE 421 (428)
T ss_pred hhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhccc
Confidence 44577999999999999999999999988876543
No 259
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.72 E-value=6.6e-15 Score=146.67 Aligned_cols=346 Identities=14% Similarity=0.088 Sum_probs=191.7
Q ss_pred CEEEecCCccccccCCCCCHHHHHHHHHHHhcCC-ccc--ccCcCCChHHHHH----HHHHHHhcCcCCCCeEEEe---C
Q 013204 33 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYH--SFWNRTTKPSLDL----AKELLEMFTASKMAKVFFT---N 102 (447)
Q Consensus 33 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~--~~~~~~~~~~~~l----~~~l~~~~~~~~~~~v~~~---~ 102 (447)
++.|.+..+-. .-.|.+++++...+.+.. .++ +....-.+...++ .+++++++. .+.+++.++ +
T Consensus 34 ~~~l~l~~sen-----~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~-a~~~~~~~~~~~~ 107 (452)
T PTZ00094 34 IEGLELIASEN-----FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFG-LDPEEWGVNVQPY 107 (452)
T ss_pred HcCeeEecccc-----cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhC-CCcccceeecCCC
Confidence 35667655531 256999999988875422 111 1111111222233 246666663 455566666 7
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCCh
Q 013204 103 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE 182 (447)
Q Consensus 103 sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (447)
||++||..++..+. ..+++|++ +..-||........-. ..........+...+++. .
T Consensus 108 sgt~an~~v~~al~--------~~gd~Ii~-~~~ehg~~l~~~~~l~----~~~~~~~~~~~~~~~~~~--------~-- 164 (452)
T PTZ00094 108 SGSPANFAVYTALL--------QPHDRIMG-LDLPSGGHLTHGFYTA----KKKVSATSIYFESLPYQV--------N-- 164 (452)
T ss_pred chHHHHHHHHHHhc--------CCCCEEEe-cccccCCccccccccc----ccccccceeeeeeeeccc--------C--
Confidence 99999999998763 22356666 3444554322110000 000000000000011100 0
Q ss_pred hHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccC
Q 013204 183 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY 262 (447)
Q Consensus 183 ~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~ 262 (447)
..+..+.++|++++....+ ..|++. .+..|...+ +++|.++|+++|+++++|++|+ +|..+........
T Consensus 165 -~~g~id~~~L~~~l~~~~~---~lvi~~--~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~-~G~i~~~~~~~~~ 233 (452)
T PTZ00094 165 -EKGLIDYDKLEELAKAFRP---KLIIAG--ASAYPRDID----YKRFREICDSVGAYLMADIAHT-SGLVAAGVLPSPF 233 (452)
T ss_pred -CCCCcCHHHHHHHHHHhCC---CEEEEe--CCCCCCccC----HHHHHHHHHHcCCEEEEeccch-hccccCCCCCCCC
Confidence 0022335888888864322 234442 334566666 9999999999999999999997 6665422111011
Q ss_pred CCCCCeeeec--ccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh---hcHHHHH
Q 013204 263 SIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQV 337 (447)
Q Consensus 263 ~~~~d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~---~~~~~~~ 337 (447)
...|++++| |+|.|+ . .|+++.++++.+.+...... ........+.++..+++..++++.+.. ++..+++
T Consensus 234 -~~~D~l~~S~hK~l~GP-~-Gg~l~~~~~~~~~l~~~~~~--~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i 308 (452)
T PTZ00094 234 -PYADVVTTTTHKSLRGP-R-SGLIFYRKKVKPDIENKINE--AVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQV 308 (452)
T ss_pred -CCCcEEEcCCccCCCCC-C-ceEEEEecccchHHHHhhcc--ccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHH
Confidence 147888765 999885 3 37777777654433221000 011111124456677777788887743 3466788
Q ss_pred HHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee----------CC
Q 013204 338 NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------GD 407 (447)
Q Consensus 338 ~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------g~ 407 (447)
.++.+++++.|++. +..+..... ......+.+..... ....+...|.++||++... .+
T Consensus 309 ~~l~~~l~~~L~~~-g~~v~~~~~-~~~~~~v~~~~~~~----------~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~ 376 (452)
T PTZ00094 309 LKNAKALAAALEKR-GYDLVTGGT-DNHLVLVDLRPFGI----------TGSKMEKLLDAVNISVNKNTIPGDKSALNPS 376 (452)
T ss_pred HHHHHHHHHHHHhC-CcEEecCCC-CCceEeecCCcCCC----------CHHHHHHHHHHCCcEEecccCCCCCcCCCCC
Confidence 88888888888764 322221100 01122333332211 1345667777789999622 25
Q ss_pred EEEEecCCCCC----HHHHHHHHHHHHHHHHH
Q 013204 408 NIMMSPPFIMS----PEEVDELISKYGKALKA 435 (447)
Q Consensus 408 ~iR~~~~~~~t----~e~i~~~~~~l~~~l~~ 435 (447)
.+|++++..++ ++||+++++.|.+.+..
T Consensus 377 ~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 377 GVRLGTPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred eEEECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 79999976665 99999999999998874
No 260
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.71 E-value=1.9e-14 Score=140.34 Aligned_cols=215 Identities=13% Similarity=0.108 Sum_probs=137.9
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccC-C-CCCC
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY-S-IKPD 267 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~-~-~~~d 267 (447)
.+++++++.. .+. .|++....+.++ ..+ +++|+++|++||+++++|++|+ +|..|.......+ . ...|
T Consensus 209 ~d~l~~~~~~---~~p-lvii~g~S~~~~-~~d----l~~i~eia~~~gA~L~VD~AH~-~Gligg~~~~~~~~~~~~~D 278 (493)
T PRK13580 209 YDEIAALARE---FKP-LILVAGYSAYPR-RVN----FAKLREIADEVGAVLMVDMAHF-AGLVAGKVFTGDEDPVPHAD 278 (493)
T ss_pred HHHHHHHHhh---cCC-EEEEeCccccCC-CcC----HHHHHHHHHHcCCEEEEECchh-hceeccccchhhcCCCCCCc
Confidence 4778887764 223 444444433343 555 9999999999999999999997 6665522111111 1 1467
Q ss_pred eee--ecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh---cHHHHHHHHHH
Q 013204 268 LVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAP 342 (447)
Q Consensus 268 ~v~--~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~---~~~~~~~~~~~ 342 (447)
+++ ++|+|.|+ ..|++++++++.+.+... .++.. +....| .++++..+++.+.++ +..+++.++.+
T Consensus 279 ~vtgT~hKaL~GP--~GG~I~~~~~l~~~L~~a----~P~i~--gg~l~p-~iAA~avAl~e~~~~ef~~y~~~l~~Na~ 349 (493)
T PRK13580 279 IVTTTTHKTLRGP--RGGLVLAKKEYADAVDKG----CPLVL--GGPLPH-VMAAKAVALAEARTPEFQKYAQQVVDNAR 349 (493)
T ss_pred EEEeCChhhccCC--CeEEEEecHHHHHHHhhC----CCccc--CCCccH-HHHHHHHHHHHHhCccHHHHHHHHHHHHH
Confidence 775 57999774 458889999988888421 12222 222233 333333345555433 36788999999
Q ss_pred HHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-----------CCEEEE
Q 013204 343 KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------GDNIMM 411 (447)
Q Consensus 343 ~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----------g~~iR~ 411 (447)
+|++.|++. ++.++.. .....++.+++.+... ....+.+.|.+.||++... ..+|||
T Consensus 350 ~La~~L~~~-G~~vv~g-gTdshIV~V~lg~~~~----------~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRI 417 (493)
T PRK13580 350 ALAEGFLKR-GARLVTG-GTDNHLVLIDVTSFGL----------TGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRL 417 (493)
T ss_pred HHHHHHHhc-CCCccCC-CCCCCEEEEEeCCHHH----------HHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEe
Confidence 999999876 3333211 1234556666654321 1234667899999998731 256999
Q ss_pred ecCC----CCCHHHHHHHHHHHHHHHHH
Q 013204 412 SPPF----IMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 412 ~~~~----~~t~e~i~~~~~~l~~~l~~ 435 (447)
+++. .++++||+++++.|.++++.
T Consensus 418 g~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 418 GTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred ccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 9987 56799999999999888764
No 261
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.71 E-value=9.2e-16 Score=148.99 Aligned_cols=234 Identities=16% Similarity=0.142 Sum_probs=152.2
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhh---cccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~---~~~~~~ 151 (447)
..+...++++++++++ +.+.+++++||++|+..+++.+. .++++|++..+.|++...... ...|.
T Consensus 38 ~~p~~~~le~~la~l~---g~~~a~~~~sG~~Ai~~~l~~l~--------~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~- 105 (369)
T cd00614 38 GNPTVDALEKKLAALE---GGEAALAFSSGMAAISTVLLALL--------KAGDHVVASDDLYGGTYRLFERLLPKLGI- 105 (369)
T ss_pred CChhHHHHHHHHHHHH---CCCCEEEEcCHHHHHHHHHHHHc--------CCCCEEEECCCCcchHHHHHHHHHhhcCe-
Confidence 5677889999999986 34578889999999999998764 335678888888877642211 11111
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
.+..++..+ ++++++.+. +++++|++|.++++.|.+.+ +++|.
T Consensus 106 -----------~~~~v~~~d------------------~~~l~~~i~----~~~~~v~~e~~~np~g~~~d----l~~i~ 148 (369)
T cd00614 106 -----------EVTFVDPDD------------------PEALEAAIK----PETKLVYVESPTNPTLKVVD----IEAIA 148 (369)
T ss_pred -----------EEEEeCCCC------------------HHHHHHhcC----CCCeEEEEECCCCCCCeecC----HHHHH
Confidence 011112110 366666664 35678899998888887776 99999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee--eecccCCCcc-cceeEEEeCh-hHHHHhhhccCCCCccCc
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAY-MPIGAILVSP-EVSEVIHSQSNTLGSFSH 307 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v--~~sK~l~gg~-~~~g~~~~~~-~~~~~~~~~~~~~~~~~~ 307 (447)
++|++||+++|+|+++... .. .......+|++ +++|.++|++ ...|++++++ ++++.+.... .
T Consensus 149 ~la~~~g~~livD~t~~~~-~~-----~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~-------~ 215 (369)
T cd00614 149 ELAHEHGALLVVDNTFATP-YL-----QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLR-------L 215 (369)
T ss_pred HHHHHcCCEEEEECCCcch-hc-----CChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHH-------H
Confidence 9999999999999998622 21 11122346877 5679998742 5688899977 7777775321 1
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-----CCcee----------eEeeeeeEEEEEee
Q 013204 308 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFA 372 (447)
Q Consensus 308 ~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~~~~~g~~~~i~~~ 372 (447)
......+|+.++.++..++.+ +...++..++.+++.+.|++.+. +|... ...+.|.++.+.+.
T Consensus 216 ~~g~~~~p~~a~~~l~~l~tl--~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~ 293 (369)
T cd00614 216 ALGTILSPFDAWLLLRGLKTL--PLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELK 293 (369)
T ss_pred hhCCCCCHHHHHHHHcCCCCH--HHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeC
Confidence 123345677776666666532 22456667777788888776532 12110 12356888888875
No 262
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.71 E-value=1.2e-14 Score=141.97 Aligned_cols=351 Identities=16% Similarity=0.177 Sum_probs=190.4
Q ss_pred CCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHH
Q 013204 30 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 109 (447)
Q Consensus 30 ~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~ 109 (447)
.-|..|+||.+-.++ ..+.+++..++..+...| .......+|++.+++++ +.+.+++++||++|+.
T Consensus 17 ~~~~v~iDlltds~t-------~ams~~~~~a~~~gd~~Y----~~~~g~~~Leeaia~~~---g~~~vv~t~~Gt~Al~ 82 (431)
T cd00617 17 RSEDVYIDLLTDSGT-------GAMSDYQWAAMMLGDEAY----AGSKSFYDLEDAVQDLF---GFKHIIPTHQGRGAEN 82 (431)
T ss_pred CCCCcCCCCCCCCCc-------HHHHHHHHHHHHhCCCcc----CCCCCHHHHHHHHHHHH---CCCeEEEcCCHHHHHH
Confidence 457788999866543 455555566655433222 23445778999999997 5568999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 189 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (447)
.++.+.. ++| +.| ...+.|..+.......++.+.... ...... ..... .|+ ...+
T Consensus 83 la~~al~-------~pG-D~V-~~~~~f~~~~~~i~~~Ga~pv~v~-i~~~~~--~~~~~--pf~-----------gniD 137 (431)
T cd00617 83 ILFSILL-------KPG-RTV-PSNMHFDTTRGHIEANGAVPVDLV-IDEAHD--AQELI--PFK-----------GNID 137 (431)
T ss_pred HHHHHhC-------CCC-CEE-ccCCcccchHHHHHhCCCEeEEEe-cccccc--ccccc--CCC-----------CCcC
Confidence 9988652 133 444 455666555433333333332110 000000 00000 000 0112
Q ss_pred HHHHHHHHHhhCCCcEEEEEEcc-ccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCC----------Cccccccc
Q 013204 190 ANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF----------GRLGTMFG 258 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~ep-v~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~----------g~~g~~~~ 258 (447)
++.|++.+.....+.+++|+++. .|+.+| .+.+.+.+++|.++|++||++||.|+++.-. |..+....
T Consensus 138 ~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG-~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ 216 (431)
T cd00617 138 VAKLEKLIDEVGAENIPYIVLTITNNTAGG-QPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIA 216 (431)
T ss_pred HHHHHHHhCcccCCCccEEEEECCcCCCCC-ccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHH
Confidence 58888888644334466666654 455556 5678899999999999999999999996511 11111110
Q ss_pred ---cccCCCCCCeeeec--ccCCCcccce-eEEEeCh-hHHHHhhhccCCCCccCcCCCCCC-cHHHHHHHHHHHHHHhh
Q 013204 259 ---CDKYSIKPDLVSFA--KALSSAYMPI-GAILVSP-EVSEVIHSQSNTLGSFSHGFTYSG-HPVSCAVAIEALKIYKE 330 (447)
Q Consensus 259 ---~~~~~~~~d~v~~s--K~l~gg~~~~-g~~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~-~~~~~~aa~a~l~~~~~ 330 (447)
.+.+ --.|..++| |..+ .++ |++++++ ++++.++........+ .++++ +..-+++...+|+....
T Consensus 217 ei~~e~~-s~sd~~~mS~~K~~~---~~~GG~i~~~d~~l~~~~~~~~~~~~~~---~~~gG~~~r~~~A~A~gL~e~~~ 289 (431)
T cd00617 217 EIAREMF-SYADGCTMSAKKDGL---VNIGGFLALRDDELYEEARQRVVLYEGF---VTYGGMAGRDMEALAQGLREAVE 289 (431)
T ss_pred HHHHHhh-ccCCEEEEEeecCCC---CccceEEEeCcHHHHHHHHHhccccCCc---cccccccHHHHHHHHHHHHhccc
Confidence 0000 013444444 3322 233 4678876 5888876321001111 12222 22223322225543212
Q ss_pred hcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCC--CCCCCCCCcchHHHHH-HHHHHcCceEEee--
Q 013204 331 RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKS--PNEPFPPEWGIGAYFG-AQCEKHGMLVRVS-- 405 (447)
Q Consensus 331 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~~~~~~~~~~-~~l~~~Gi~~~~~-- 405 (447)
.+..+...++.+++.+.|++. +.+++. +.-|.++.++...-.. +...+ -+..+. ..+.+.||.+...
T Consensus 290 ~~~l~~~~~~r~~l~~~L~~~-G~~v~~--P~Ggh~v~~d~~~~~~~~~~~~~-----~~~~la~~L~~e~gV~~~~~g~ 361 (431)
T cd00617 290 EDYLRHRVEQVRYLGDRLDEA-GVPIVE--PAGGHAVFIDAREFLPHIPQEQF-----PAQALAAELYLEAGVRAVELGI 361 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCCccC--CCcceEEEEEhHHhcCCCCcccC-----cHHHHHHHHHHHcCeeEEeecc
Confidence 233343344457777778776 334332 2233455555543111 00111 134455 4455667876531
Q ss_pred ---------C-------CEEEEecCC-CCCHHHHHHHHHHHHHHHHH
Q 013204 406 ---------G-------DNIMMSPPF-IMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 406 ---------g-------~~iR~~~~~-~~t~e~i~~~~~~l~~~l~~ 435 (447)
+ +.+|+..|- ..|.++++.+.+.|...++.
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 362 FSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred eecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 1 469999885 67999999999999988876
No 263
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.71 E-value=5.1e-15 Score=144.20 Aligned_cols=320 Identities=13% Similarity=0.054 Sum_probs=185.8
Q ss_pred CCHH-HHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeC-ChhhHHHHHHHHHHHHHHhcCCCCc
Q 013204 50 SEPR-LVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTN-SGSEANDTQVKLVWYYNNALGRPNK 127 (447)
Q Consensus 50 ~~p~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~-sGseA~~~Al~~~~~~~~~~~~~~~ 127 (447)
-+|+ |++++.+..-.. .|+. ........+..+.+.+++...+..+|+|+. |||++++.++..+. .+
T Consensus 23 ~~~~~v~~a~~~~~~~~--~hr~-~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~--------~~- 90 (378)
T PRK03080 23 KRPGWQLEALADALLGR--SHRQ-KPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLL--------GA- 90 (378)
T ss_pred CChHHHHHHHHhhhccc--CcCC-HHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcC--------CC-
Confidence 4677 888887654311 1211 011344556667777776422345788886 99999999998653 21
Q ss_pred ceEEEEcCCCccchhhh-hc-ccCC-ccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCc
Q 013204 128 KKFIARQKSYHGSTLIA-AS-LSGL-PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET 204 (447)
Q Consensus 128 ~~vi~~~~~yhg~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~ 204 (447)
+++++...+.||..... +. ..+. . +..++.+.. ...+ +++++ .
T Consensus 91 ~~~~vi~~g~f~~~~~~~~~~~~g~~~------------v~~~~~~~g-------~~~d------~~~i~-------~-- 136 (378)
T PRK03080 91 RRVDHLAWESFGSKWATDVVKQLKLED------------PRVLEADYG-------SLPD------LSAVD-------F-- 136 (378)
T ss_pred CcceEEEeCHHHHHHHHHHHhhcCCCC------------ceEeccCCC-------CCCC------HhhcC-------C--
Confidence 12233334566664332 11 1111 1 011111100 0000 12211 1
Q ss_pred EEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCCCcccce
Q 013204 205 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPI 282 (447)
Q Consensus 205 ~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~gg~~~~ 282 (447)
+..|.+..+.+.+|.+.| +++|.+ ++||+++++|-+|+ +|.. ++..+ . .|++++| |.|+++ .++
T Consensus 137 ~~~V~~~h~~t~tG~~~p----i~~I~~--~~~g~~~vVDa~qs-~G~~--pidv~--~--iD~~~~s~~K~l~~P-~G~ 202 (378)
T PRK03080 137 DRDVVFTWNGTTTGVRVP----VARWIG--ADREGLTICDATSA-AFAL--PLDWS--K--LDVYTFSWQKVLGGE-GGH 202 (378)
T ss_pred CCCEEEEecCCccceecc----chhhcc--ccCCCeEEEecccc-cccC--CCCHH--H--CcEEEEehhhhCCCC-Cce
Confidence 224667777777788888 888888 78999999999987 5433 22222 2 4888776 899886 589
Q ss_pred eEEEeChhHHHHhhhccCCC---------------CccCcCCC-CCCcHHHHHHHHHHHHHHhhh-c---HHHHHHHHHH
Q 013204 283 GAILVSPEVSEVIHSQSNTL---------------GSFSHGFT-YSGHPVSCAVAIEALKIYKER-N---IVEQVNKIAP 342 (447)
Q Consensus 283 g~~~~~~~~~~~~~~~~~~~---------------~~~~~~~t-~~~~~~~~~aa~a~l~~~~~~-~---~~~~~~~~~~ 342 (447)
|+++.+++.++.+....... .......| ++++..++.+..++|+.+.+. + ..++.+++.+
T Consensus 203 g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~ 282 (378)
T PRK03080 203 GMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANAS 282 (378)
T ss_pred EEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999887765321000 00011123 234445565667788877654 3 3456666777
Q ss_pred HHHHhHhhccCCCcee--eEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-----CCEEEEecCC
Q 013204 343 KFQDGVKAFSDSPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPF 415 (447)
Q Consensus 343 ~l~~~L~~l~~~~~~~--~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----g~~iR~~~~~ 415 (447)
++++.|+++....... .....+.++.+.+++.. + .....+...++++|+++..+ ++.+|++++.
T Consensus 283 ~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~-~--------~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~ 353 (378)
T PRK03080 283 VLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQ-A--------AVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGP 353 (378)
T ss_pred HHHHHHHhCCCcccccCCccccCccEEEEEcCCch-H--------HHHHHHHHHHHHcCCeeccccccCCCCcEEEecCC
Confidence 8888887763222211 11112234555544310 0 01223566677888887643 2579999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHH
Q 013204 416 IMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 416 ~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
.+|++||++++++|++++++++.
T Consensus 354 ~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 354 TVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999998887653
No 264
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.70 E-value=2.1e-14 Score=142.61 Aligned_cols=327 Identities=13% Similarity=0.073 Sum_probs=184.7
Q ss_pred CCHHHHHHHHHHH-hcCCccc---ccCcCCChHHHHHHH----HHHHhcCcCCCCeEEE---eCChhhHHHHHHHHHHHH
Q 013204 50 SEPRLVAAATAQL-NTLPFYH---SFWNRTTKPSLDLAK----ELLEMFTASKMAKVFF---TNSGSEANDTQVKLVWYY 118 (447)
Q Consensus 50 ~~p~v~~a~~~~~-~~~~~~~---~~~~~~~~~~~~l~~----~l~~~~~~~~~~~v~~---~~sGseA~~~Al~~~~~~ 118 (447)
..|.+++++...+ .++..++ ++.++. ....++++ +.++.|. ...+...+ ..||+.||..++..+.
T Consensus 46 ~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~-~~~d~lE~~~~~~~~~~f~-~~~~~~~~nv~~~SG~~AN~av~~aL~-- 121 (475)
T PLN03226 46 TSRAVMEALGSCLTNKYSEGLPGARYYGGN-EYIDQIETLCQKRALEAFR-LDPEKWGVNVQPLSGSPANFAVYTALL-- 121 (475)
T ss_pred CCHHHHHHHhhHHhccccCCCCCCcCcCCC-hhHHHHHHHHHHHHHHHhC-CCcceeEEecCcCchHHHHHHHHHHhC--
Confidence 5689999998888 4433322 233333 24444443 2444442 22223223 3799999999998764
Q ss_pred HHhcCCCCcceEEEEcCC-----CccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHH
Q 013204 119 NNALGRPNKKKFIARQKS-----YHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 193 (447)
Q Consensus 119 ~~~~~~~~~~~vi~~~~~-----yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 193 (447)
.++++|+..+-. -|++.......+....+ ...+++.. ... ....++++|
T Consensus 122 ------~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~----------~~~~~y~~----~~~------~g~iD~d~L 175 (475)
T PLN03226 122 ------QPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIY----------FESMPYRL----DES------TGLIDYDKL 175 (475)
T ss_pred ------CCCCEEEECCCCcCcchhhhhhhcccccccceEE----------EEeeeeee----cCC------CCCcCHHHH
Confidence 345778775431 13332211111111100 00001100 000 001125888
Q ss_pred HHHHHhhCCCcEEEEEE-ccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--
Q 013204 194 EDLILKEGPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS-- 270 (447)
Q Consensus 194 e~~l~~~~~~~~a~vi~-epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~-- 270 (447)
++++....+ ..|++ +.++++ ..+ +++|+++|++||++|++|++|. +|..+........+ ..|+++
T Consensus 176 e~~l~~~~p---klIv~~~S~~s~---~~D----~a~i~~ia~~~ga~LlvD~AH~-~Gli~~~~~~~p~~-~~Div~~t 243 (475)
T PLN03226 176 EKKAMLFRP---KLIIAGASAYPR---DWD----YARMRKIADKVGALLMCDMAHI-SGLVAAQEAASPFE-YCDVVTTT 243 (475)
T ss_pred HHHHhhcCC---eEEEEecCcCCC---ccC----HHHHHHHHHHcCCEEEEEchhh-hCcccCCCCCCCCC-CCeEEEec
Confidence 888764332 34444 555543 333 7899999999999999999997 55554332111111 368775
Q ss_pred ecccCCCcccceeEEEeChhHH-----------HHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhc---HHHH
Q 013204 271 FAKALSSAYMPIGAILVSPEVS-----------EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN---IVEQ 336 (447)
Q Consensus 271 ~sK~l~gg~~~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~---~~~~ 336 (447)
++|+|.|+ +.|++++++++. +.....+ . ......+.++++..+++..++++.+...+ +.++
T Consensus 244 ~hK~L~GP--~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~-~--a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~ 318 (475)
T PLN03226 244 THKSLRGP--RGGMIFFRKGPKPPKGQGEGAVYDYEDKIN-F--AVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQ 318 (475)
T ss_pred CcccccCC--CceEEEEchhhcccccCCCccHHHHHHHhc-c--ccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 56999874 347788887654 2211100 0 11112233456667777778888876443 5788
Q ss_pred HHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee----------C
Q 013204 337 VNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------G 406 (447)
Q Consensus 337 ~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------g 406 (447)
+.++.++|++.|++. +..++..-. ...+..+++..... ....+.+.|.+.||++-.. .
T Consensus 319 ~~~na~~L~~~L~~~-G~~l~~~~t-~~hi~lv~~~~~gi----------~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~ 386 (475)
T PLN03226 319 VKANAAALANRLMSK-GYKLVTGGT-DNHLVLWDLRPLGL----------TGSRVEKVLDLAHITLNKNAVPGDSSALVP 386 (475)
T ss_pred HHHHHHHHHHHHHhC-CCEEEcCCC-CCCEEEEEccCCCC----------CHHHHHHHHHHCCCEECCCCCCCCcccCCC
Confidence 888999999988774 433332111 12444556532211 1345677788889887632 2
Q ss_pred CEEEEe----cCCCCCHHHHHHHHHHHHHHHHH
Q 013204 407 DNIMMS----PPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 407 ~~iR~~----~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
..+|+. .+..++++|++++.+.|.++++.
T Consensus 387 ~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 387 GGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred CCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 458883 34678999999999999998873
No 265
>PLN02242 methionine gamma-lyase
Probab=99.70 E-value=3.4e-15 Score=146.38 Aligned_cols=242 Identities=12% Similarity=0.139 Sum_probs=145.6
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
..+...+|++++++++ +.+.+++++||++|+..++..+. ..++.|++..+.|.+......... .
T Consensus 74 ~~Pt~~~LE~~lA~l~---g~~~~l~~~sG~~Ai~~al~al~--------~~GD~Vl~~~~~Y~~~~~~~~~~~-----~ 137 (418)
T PLN02242 74 FNPTVLNLGRQMAALE---GTEAAYCTASGMSAISSVLLQLC--------SSGGHVVASNTLYGGTHALLAHFL-----P 137 (418)
T ss_pred CChhHHHHHHHHHHHh---CCCeEEEEccHHHHHHHHHHHHh--------CCCCEEEEcCCcHHHHHHHHHHhh-----h
Confidence 4667889999999986 45678899999999999998664 334788888888855532111000 0
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
+..+. .+..++.. +++++++.+. +.++++|++|..++..|.+.+ +++|+++|
T Consensus 138 ~~~G~---~~~~~d~~------------------d~e~l~~~i~---~~~tklV~lesp~NPtG~v~d----l~~I~~la 189 (418)
T PLN02242 138 RKCNI---TTTFVDIT------------------DLEAVKKAVV---PGKTKVLYFESISNPTLTVAD----IPELARIA 189 (418)
T ss_pred hccCc---eEEEcCCC------------------CHHHHHHhcC---cCCCEEEEEecCCCCCCcccC----HHHHHHHH
Confidence 00010 01111111 1366776664 224678888888777777765 99999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCee--eecccCCCcccc-eeEEEeChhHHHHhhhccCCCCccCcCCCC
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMP-IGAILVSPEVSEVIHSQSNTLGSFSHGFTY 311 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v--~~sK~l~gg~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 311 (447)
++||+++|+||+|+.+. .. ...++ .|++ ++||.+++++.+ .|++++++++++.+.... ... ...+
T Consensus 190 ~~~gi~livDea~~~~~-~~----~~~~g--~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~----~~~-~~~~ 257 (418)
T PLN02242 190 HEKGVTVVVDNTFAPMV-LS----PARLG--ADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLH----HGA-LMLL 257 (418)
T ss_pred HHhCCEEEEECCCCccC-CC----HHHcC--CcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHh----hhh-hhcc
Confidence 99999999999997442 11 11123 4665 578999876566 488888998888776321 000 0111
Q ss_pred CCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhcc---CCCcee----------eE---eeeeeEEEEEee
Q 013204 312 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS---DSPIIG----------EI---RGTGLILGTEFA 372 (447)
Q Consensus 312 ~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~---~~~~~~----------~~---~~~g~~~~i~~~ 372 (447)
+..+..+.|++..+..-.-+...++..++.+++.+.|++.. .+|... .. .|.|.++.+++.
T Consensus 258 g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~ 334 (418)
T PLN02242 258 GPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMD 334 (418)
T ss_pred CCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEEC
Confidence 22222333333333211112244667777888888887651 111100 01 367888888885
No 266
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.68 E-value=4.4e-15 Score=144.89 Aligned_cols=286 Identities=15% Similarity=0.106 Sum_probs=167.3
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
+.+...+|++.+++++. .+..++++||+.|+..++.... ..+++||+..+.|.+...........
T Consensus 59 ~~pt~~~Le~~lA~l~G---~~~al~~~sG~~Ai~~~l~al~--------~~Gd~Vv~~~~~y~~~~~~~~~~~~~---- 123 (386)
T PRK06767 59 GNPTVKLFEERMAVLEG---GEEALAFGSGMAAISATLIGFL--------KAGDHIICSNGLYGCTYGFLEVLEEK---- 123 (386)
T ss_pred CCcchHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEcCCcHHHHHHHHHHHHhh----
Confidence 44557889999999973 4567888999999988886553 33467887777664442211111100
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
++. ....++.. +++++++.+. +++++|++|..++..|.+.+ +++|.++|
T Consensus 124 --~gi---~~~~~~~~------------------d~~~l~~~i~----~~tklV~lesp~NptG~v~d----l~~I~~la 172 (386)
T PRK06767 124 --FMI---THSFCDME------------------TEADIENKIR----PNTKLIFVETPINPTMKLID----LKQVIRVA 172 (386)
T ss_pred --cCe---EEEEeCCC------------------CHHHHHHhhC----cCceEEEEeCCCCCCceecC----HHHHHHHH
Confidence 000 01111111 1256666554 24667888877777777766 89999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccce-eEEEeChhHHHHhhhccCCCCccCcCCCC
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFSHGFTY 311 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 311 (447)
+++|+++|+||+|+ .+..+.+. ....|+++ ++|.++|.+.++ |+++++++.++.+.... +. ..+.
T Consensus 173 ~~~g~~vivD~a~a-~~~~~~pl-----~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~---~~-~~g~-- 240 (386)
T PRK06767 173 KRNGLLVIVDNTFC-SPYLQRPL-----ELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPM---RK-DIGG-- 240 (386)
T ss_pred HHcCCEEEEECCCc-ccccCCch-----hcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHH---HH-HhCC--
Confidence 99999999999985 22222221 12347765 569998754564 78888888766543210 00 0111
Q ss_pred CCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCcee---------eEeeeeeEEEEEeecCCCCCCCCC
Q 013204 312 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIG---------EIRGTGLILGTEFADNKSPNEPFP 382 (447)
Q Consensus 312 ~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~---------~~~~~g~~~~i~~~~~~~~~~~~~ 382 (447)
..+|+.++.++..|+.+ +...++.+++..++.+.|++.+....+. ...+.|.++.+++.....
T Consensus 241 ~~~~~~a~l~~~~L~tl--~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~------ 312 (386)
T PRK06767 241 IMAPFDAWLLLRGLKTL--AVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKE------ 312 (386)
T ss_pred CCCHHHHHHHHcCCCcH--HHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHH------
Confidence 23566555555555433 2345666778888888887764322211 123457778888753210
Q ss_pred CCcchHHHHHHHHHHcCceEEeeC----------------------------CEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 383 PEWGIGAYFGAQCEKHGMLVRVSG----------------------------DNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 383 ~~~~~~~~~~~~l~~~Gi~~~~~g----------------------------~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
....|.+.|...++.++.+| +.|||+ +--|+.+.+++-|++++.
T Consensus 313 ----~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~s----vGlE~~~dl~~dl~~al~ 384 (386)
T PRK06767 313 ----ETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLS----VGLESWEDIVSDLEQALK 384 (386)
T ss_pred ----HHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEE----eccCCHHHHHHHHHHHHh
Confidence 13346666655544443221 357888 344567777777777765
No 267
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.68 E-value=4.7e-14 Score=148.77 Aligned_cols=352 Identities=13% Similarity=0.066 Sum_probs=209.9
Q ss_pred ecCCccccccCCCCCHHHHHHHHHHHhc---CCcccccC-----cCCChHHHHHHHHHHHhcCcCCCCeEEEeCChh---
Q 013204 37 DSLAGLWCTALGGSEPRLVAAATAQLNT---LPFYHSFW-----NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGS--- 105 (447)
Q Consensus 37 D~~~~~~~~~lG~~~p~v~~a~~~~~~~---~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGs--- 105 (447)
|++...+..+||-|--+...++....-. +...|++. .+..+...++.+.+++++ +.+.|.|+++++
T Consensus 520 ~~~~~~~~~plgsctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~---g~~~v~f~pnaga~g 596 (993)
T PLN02414 520 DLSLVHSMIPLGSCTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEIT---GFDSFSLQPNAGAAG 596 (993)
T ss_pred ccccccCCccCcccccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHh---CCCeEEEcCCCcHHH
Confidence 4444444577887544444333333222 11122221 223344567888888886 568999998777
Q ss_pred -hHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhH
Q 013204 106 -EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 184 (447)
Q Consensus 106 -eA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (447)
+|+..+++.. ...+|+.. .++++...+-||+........|.. +..++++..
T Consensus 597 e~a~~~vi~~~---~~~~Gd~~-r~~vli~~~aH~sn~a~a~~~G~~------------vv~v~~d~~------------ 648 (993)
T PLN02414 597 EYAGLMVIRAY---HLSRGDHH-RNVCIIPVSAHGTNPASAAMCGMK------------IVVVGTDAK------------ 648 (993)
T ss_pred HHHHHHHHHHH---HhccCCCC-CCEEEeCCCcCccCHHHHHHCCCE------------EEEeccCCC------------
Confidence 6777766655 33334333 345666779999976655543322 122332111
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCC
Q 013204 185 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI 264 (447)
Q Consensus 185 ~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~ 264 (447)
+..++++|++++.... +++++|++...++.+|...+ +++|.++|+++|+++++|-++. .+..+ ...-..+
T Consensus 649 -G~vDle~L~~~i~~~~-~~ta~V~vt~pSn~gg~e~~----I~eI~~iah~~Galv~vDgAq~-~a~~~---l~~p~~~ 718 (993)
T PLN02414 649 -GNINIEELRKAAEAHK-DNLAALMVTYPSTHGVYEEG----IDEICDIIHDNGGQVYMDGANM-NAQVG---LTSPGFI 718 (993)
T ss_pred -CCcCHHHHHHHHhccC-CCeEEEEEECCCccccccch----HHHHHHHHHHcCCEEEEEecCH-HhccC---cCCcccc
Confidence 1122588888886322 36888989888888887776 9999999999999999999885 21111 1111224
Q ss_pred CCCeeeec--ccCC----CcccceeEEEeChhHHHHhhhcc--CC---CCccC--cCCCC----CCcHHHHHHHHHHHHH
Q 013204 265 KPDLVSFA--KALS----SAYMPIGAILVSPEVSEVIHSQS--NT---LGSFS--HGFTY----SGHPVSCAVAIEALKI 327 (447)
Q Consensus 265 ~~d~v~~s--K~l~----gg~~~~g~~~~~~~~~~~~~~~~--~~---~~~~~--~~~t~----~~~~~~~~aa~a~l~~ 327 (447)
..|+++++ |.|+ +|+.++|++.++++++..+-... .. .+... ..+|. .++.+.+.+++.-+..
T Consensus 719 GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~ 798 (993)
T PLN02414 719 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAM 798 (993)
T ss_pred CCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHH
Confidence 47998874 7554 45577999999998876654211 00 00001 11232 2333455555666666
Q ss_pred HhhhcH---HHHHHHHHHHHHHhHhhccCCCceeeEeeeee-E--EEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCce
Q 013204 328 YKERNI---VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL-I--LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGML 401 (447)
Q Consensus 328 ~~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~-~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 401 (447)
+..+++ .+....+..+++++|++........ ..+. + +.+++..-+.. . ......+.++|++.|++
T Consensus 799 lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~---~~~~~~hEfv~~~~~l~~~-~-----g~~~~di~krL~d~Gih 869 (993)
T PLN02414 799 MGSEGLTDASKIAILNANYMAKRLEGHYPVLFRG---KNGTCAHEFIIDLRPFKNT-A-----GIEPEDVAKRLMDYGFH 869 (993)
T ss_pred HCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccC---CCCCeeeeEEEeccccccc-c-----CCCHHHHHHHHHHcCcE
Confidence 655665 5667778888888887631111111 0111 1 11222210000 0 00135688999999998
Q ss_pred EE----eeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 402 VR----VSGDNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 402 ~~----~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
.. |..+.+|++|.-..+++|||+++++|.+...+.++
T Consensus 870 apt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 870 APTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred EeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 65 33567999999999999999999999999888765
No 268
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.68 E-value=1.8e-13 Score=134.18 Aligned_cols=345 Identities=13% Similarity=0.049 Sum_probs=199.7
Q ss_pred CCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCC-CeEEE--eCChhhHHHHHHHHHHHHHHh----
Q 013204 49 GSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKM-AKVFF--TNSGSEANDTQVKLVWYYNNA---- 121 (447)
Q Consensus 49 ~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~v~~--~~sGseA~~~Al~~~~~~~~~---- 121 (447)
..+|++.+++...+.+........+...+...+..+++++++..... +++.| ++||||||..|+..++.....
T Consensus 52 ~~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~ 131 (431)
T TIGR01788 52 WMEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEA 131 (431)
T ss_pred CCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHh
Confidence 35889999998888643222111222335556666777777742212 34555 799999999999887643211
Q ss_pred cCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhC
Q 013204 122 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG 201 (447)
Q Consensus 122 ~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~ 201 (447)
.|.......++.+..-|-++..+...-+.. +..++.... + ...++++|++.+.
T Consensus 132 ~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~------------v~~i~~d~~------~------~~vd~~~L~~~i~--- 184 (431)
T TIGR01788 132 AGKPTDKPNLVMGSNVQVCWEKFARYFDVE------------LREVPMDPG------R------YVIDPEQVVEAVD--- 184 (431)
T ss_pred cCCCCCCcEEEEcCcchHHHHHHHHHcCce------------eEEEecCCC------c------eeeCHHHHHHHHh---
Confidence 121112346666778888765554332211 112222110 0 0112477888776
Q ss_pred CCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhc------CCEEEEehhhcCCCc---ccc-ccccccCCCCCCeeee
Q 013204 202 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY------DILFIADEVICAFGR---LGT-MFGCDKYSIKPDLVSF 271 (447)
Q Consensus 202 ~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~------g~~li~DEv~~g~g~---~g~-~~~~~~~~~~~d~v~~ 271 (447)
+.+.+|++..++++.|.+.| +++|.++|++| |+++++|-+|.|+-. .++ .+.+. ....|.+++
T Consensus 185 -~~t~lV~~t~g~t~tG~idp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~--~~~~DSis~ 257 (431)
T TIGR01788 185 -ENTIGVVCILGTTYTGEYED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR--LPRVKSINV 257 (431)
T ss_pred -hCCeEEEEEeCCCCCcccCC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC--CCCceEEEE
Confidence 24568888889999999988 99999999999 999999999986421 121 11111 124688888
Q ss_pred c--ccCCCcccceeEEEeChh--HHHHhhhccCCCCccCcCCCCCCc-H-HHHHHHHHHHHHHhhhc---HHHHHHHHHH
Q 013204 272 A--KALSSAYMPIGAILVSPE--VSEVIHSQSNTLGSFSHGFTYSGH-P-VSCAVAIEALKIYKERN---IVEQVNKIAP 342 (447)
Q Consensus 272 s--K~l~gg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~t~~~~-~-~~~~aa~a~l~~~~~~~---~~~~~~~~~~ 342 (447)
+ |.+.++ .++|+++.+++ +.+.+.......+.-....+.... + ....+.+..|..+...+ ..++..++.+
T Consensus 258 s~HK~~~~P-~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~ 336 (431)
T TIGR01788 258 SGHKYGLVY-PGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVAR 336 (431)
T ss_pred CchhccCCC-CCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHH
Confidence 7 655455 68899988764 333332111111110000112111 1 13333455555444433 4566667778
Q ss_pred HHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEE----ee---C-CEEEEecC
Q 013204 343 KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VS---G-DNIMMSPP 414 (447)
Q Consensus 343 ~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~---g-~~iR~~~~ 414 (447)
++.+.|++++...++... ....++.+.+....... .....+.++|.++|+.+. |. | ..+|++..
T Consensus 337 ~l~~~L~~~~~~el~~~~-~~~~iV~Fr~~~~~~~~-------~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~ 408 (431)
T TIGR01788 337 YLAEEIAKLGPFEIISDG-SGIPLVAFKLKDDADPG-------YTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVR 408 (431)
T ss_pred HHHHHHHhCCCEEEeeCC-CCceEEEEEeCCCCCCC-------cCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEec
Confidence 888888776333333221 12334445444321000 013458889999998642 21 2 24899876
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q 013204 415 FIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 415 ~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
.-++++.++.+++.|++++.++
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 409 EGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CCCCHHHHHHHHHHHHHHHHhh
Confidence 6789999999999999998765
No 269
>PRK02769 histidine decarboxylase; Provisional
Probab=99.67 E-value=3.5e-13 Score=130.26 Aligned_cols=297 Identities=17% Similarity=0.114 Sum_probs=181.1
Q ss_pred ChHHHHHHHHHHHhcCcCCCC-eEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 76 TKPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~~~-~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
.+...+..+.+++++...+.+ ..+|++||||||..|+..++.. .+ ...|+.+..-|.+...+...-+...
T Consensus 64 ~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~------~~-~~~ii~s~~~H~Sv~ka~~~lg~~~-- 134 (380)
T PRK02769 64 FDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLAREL------FP-DGTLYYSKDTHYSVSKIARLLRIKS-- 134 (380)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHh------CC-CcEEEeCCCceehHHHHHHHcCCCC--
Confidence 345556777778887432222 3589999999999998887643 11 2356667777777654443222211
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
..+++... ...++++|++.+... ...+.+|++...++..|.+.| +++|.++|
T Consensus 135 ----------~~V~~~~~-------------g~id~~~L~~~i~~~-~~~t~lvv~t~gtt~tG~idp----i~~I~~i~ 186 (380)
T PRK02769 135 ----------RVITSLPN-------------GEIDYDDLISKIKEN-KNQPPIIFANIGTTMTGAIDN----IKEIQEIL 186 (380)
T ss_pred ----------ceeccCCC-------------CcCcHHHHHHHHHhC-CCCcEEEEEEeCCCCCcccCC----HHHHHHHH
Confidence 11111110 012247788888654 234678888888999999988 99999999
Q ss_pred HhcC---CEEEEehhhcCCCcccc---ccccccCCCCCCeeeec--ccCCCcccceeEEEeChhHHHHhhhccCCCCccC
Q 013204 235 KKYD---ILFIADEVICAFGRLGT---MFGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 306 (447)
Q Consensus 235 ~~~g---~~li~DEv~~g~g~~g~---~~~~~~~~~~~d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 306 (447)
++|| +++++|-+|.|+ .... ...++... ..|.++++ |.++++ .++|+++.+++..+.+...........
T Consensus 187 ~~~g~~~~~lHVDaA~gg~-~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P-~g~G~l~~r~~~~~~~~~~~~yl~~~d 263 (380)
T PRK02769 187 KKIGIDDYYIHADAALSGM-ILPFVNNPPPFSFAD-GIDSIAISGHKFIGSP-MPCGIVLAKKKYVERISVDVDYIGSRD 263 (380)
T ss_pred HHhCCCceEEEEEecccce-eecccCccccCCccC-CCCEEEECCcccCCCC-CCcEEEEEehhhhhhcccCccccCCCC
Confidence 9998 699999999864 2210 00111111 47888887 666656 689999999887665532211111111
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHhhhc---HHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCC
Q 013204 307 HGFTYSGHPVSCAVAIEALKIYKERN---IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPP 383 (447)
Q Consensus 307 ~~~t~~~~~~~~~aa~a~l~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~ 383 (447)
.....+.+..+.++.+++|+.+...+ ..++..++.+++.+.|++. +.. .........+. |..+.
T Consensus 264 ~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~--~~~~p~~~~v~--f~~~~-------- 330 (380)
T PRK02769 264 QTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIP--AWRNPNSITVV--FPCPS-------- 330 (380)
T ss_pred CCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCE--EEcCCCceEEE--EcCCC--------
Confidence 11122233455666777787766544 4466677777888888664 222 12222223322 33221
Q ss_pred CcchHHHHHHHHHHcCceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 384 EWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 384 ~~~~~~~~~~~l~~~Gi~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
..+ .+|..+.+..+.+|++...-++.+.||.+++-|.+.+..
T Consensus 331 -----~~~-----~~~w~l~~~~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 331 -----ERI-----WKKWHLATSGNQAHIITMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred -----HHH-----HhCeeEcccCCEEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 012 156766666677888877788999999999988887753
No 270
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.67 E-value=1.2e-13 Score=127.15 Aligned_cols=306 Identities=15% Similarity=0.127 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHhcC---cCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 78 PSLDLAKELLEMFT---ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 78 ~~~~l~~~l~~~~~---~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
..+++++-|-.... ..++++++.+++++.||++....+. ..++..++.+|-|.|......-.+|....
T Consensus 126 frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLa--------dpgdafLvPtPyY~gfdrdl~~rTgveiv- 196 (471)
T KOG0256|consen 126 FRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLA--------DPGDAFLVPTPYYPGFDRDLRWRTGVEIV- 196 (471)
T ss_pred HHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhc--------CCCceeeecCCCCCcccccceeccCceEE-
Confidence 34444444444332 2377899999999999999887653 44588999999998874333332332110
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhh--CCCcEEEE-EEccccCCCCCccCChhHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAF-IAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~a~v-i~epv~~~~G~~~~~~~~l~~l~ 231 (447)
..+....+-++ .+ .+.||+++.+. ...++++| |++|.|+-| ...+++.|..+.
T Consensus 197 ---------pv~c~Ss~~f~-----it--------v~alE~A~~~A~~~~~kVkGvlitNPsNPLG--~~~~~e~L~~ll 252 (471)
T KOG0256|consen 197 ---------PVHCSSSNGFQ-----IT--------VEALEAALNQARKLGLKVKGVLITNPSNPLG--TTLSPEELISLL 252 (471)
T ss_pred ---------EEEeecCCCcc-----cc--------HHHHHHHHHHHHHhCCceeEEEEeCCCCCCC--CccCHHHHHHHH
Confidence 01111111111 11 24455554331 23456655 455555555 445789999999
Q ss_pred HHHHhcCCEEEEehhhcCCCcccccccc--cc---CCCCCCee----eecccCCCcccceeEEEe-ChhHHHHhhhccCC
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGC--DK---YSIKPDLV----SFAKALSSAYMPIGAILV-SPEVSEVIHSQSNT 301 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~--~~---~~~~~d~v----~~sK~l~gg~~~~g~~~~-~~~~~~~~~~~~~~ 301 (447)
.++.++++.+|+||||+|-......|-. +. ....+|-+ .+||-||-+++++|++.. ++++.....+-
T Consensus 253 ~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~km--- 329 (471)
T KOG0256|consen 253 NFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKM--- 329 (471)
T ss_pred HHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHH---
Confidence 9999999999999999865443332211 11 11245533 579988876699999997 55676666531
Q ss_pred CCccCcCCCCC-CcHHHHHHHHHHHH--HHhh---hcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCC
Q 013204 302 LGSFSHGFTYS-GHPVSCAVAIEALK--IYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNK 375 (447)
Q Consensus 302 ~~~~~~~~t~~-~~~~~~~aa~a~l~--~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~ 375 (447)
. +|+ .++..+.-....|. .+.+ ++-..+++.+.+++.+.|+++ ++..-..+.|++.++++..--
T Consensus 330 ----s---sf~~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l---gI~cl~s~AGlF~wvDlr~lL 399 (471)
T KOG0256|consen 330 ----S---SFGLVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL---GIPCLKSNAGLFCWVDLRKLL 399 (471)
T ss_pred ----h---hccCCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc---CCceeecCCeeEEEEEhHHhc
Confidence 1 221 12333332222222 1111 122345555566666777766 343344567889898876422
Q ss_pred CCCCCCCCCcchHHHHHHHHHHc-CceEEeeC-------CEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 376 SPNEPFPPEWGIGAYFGAQCEKH-GMLVRVSG-------DNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~g-------~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
.+. .+.+ -..++++++++ ++.++|+. +.+|++.. +..++.++-+++||+..+.+
T Consensus 400 ~s~-tfe~----El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFA-n~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256|consen 400 TSL-TFEG----ELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFA-NMSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred CcC-ChHH----HHHHHHHHHHhhccccCCCCcceecCCCeEEEEec-cCCHHHHHHHHHHHHHHHHh
Confidence 111 1211 12366777776 99999874 67999932 34555555599999988874
No 271
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.66 E-value=2.6e-14 Score=138.46 Aligned_cols=299 Identities=16% Similarity=0.117 Sum_probs=167.1
Q ss_pred CCCCHHHHHHHHHHHhcCCcc-cc-cC--c-CCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhc
Q 013204 48 GGSEPRLVAAATAQLNTLPFY-HS-FW--N-RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL 122 (447)
Q Consensus 48 G~~~p~v~~a~~~~~~~~~~~-~~-~~--~-~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~ 122 (447)
|..++.+.+++.+.+.+.... +. .. . ...+...++.+++++++. .+.++++|++|+++|++.+++.+.....
T Consensus 8 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g-~~~~~v~~~~g~t~a~~~~l~~l~~~~~-- 84 (353)
T TIGR03235 8 TPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALG-ADTEEVIFTSGATESNNLAILGLARAGE-- 84 (353)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEeCCHHHHHHHHHHHHHHhcc--
Confidence 457899999999987542111 11 00 0 012345678888888863 4567899999999999999886642210
Q ss_pred CCCCcceEEEEcCCCccchhhhhcc---cCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHh
Q 013204 123 GRPNKKKFIARQKSYHGSTLIAASL---SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK 199 (447)
Q Consensus 123 ~~~~~~~vi~~~~~yhg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 199 (447)
.++++.|++ ....|.+....... .|.. +..++....+ ..+++++++.+.
T Consensus 85 -~~g~~~vi~-~~~~~~s~~~~~~~~~~~G~~------------v~~v~~~~~~-------------~~d~~~l~~~l~- 136 (353)
T TIGR03235 85 -QKGKKHIIT-SAIEHPAVLEPIRALERNGFT------------VTYLPVDESG-------------RIDVDELADAIR- 136 (353)
T ss_pred -cCCCCeeeE-cccccHHHHHHHHHHHhcCCE------------EEEEccCCCC-------------cCCHHHHHHhCC-
Confidence 122244544 44555543222211 1111 1112211100 011366776664
Q ss_pred hCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCCC
Q 013204 200 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSS 277 (447)
Q Consensus 200 ~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~g 277 (447)
+++++|+++.+++..|.+.+ +++|.++|++||+++|+|++|+ +|.. .+ +.....+|++++| |.+ |
T Consensus 137 ---~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~~ivD~a~~-~g~~--~~--~~~~~~~D~~~~s~~K~~-g 203 (353)
T TIGR03235 137 ---PDTLLVSIMHVNNETGSIQP----IREIAEVLEAHEAFFHVDAAQV-VGKI--TV--DLSADRIDLISCSGHKIY-G 203 (353)
T ss_pred ---CCCEEEEEEcccCCceeccC----HHHHHHHHHHcCCEEEEEchhh-cCCc--cc--cccccCCCEEEeehhhcC-C
Confidence 24678888888888888877 8999999999999999999987 5443 12 2222357888877 964 4
Q ss_pred cccceeEEEeChhHHHHhhhccCCC--CccCcCCCCCCcHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHhHhhccC
Q 013204 278 AYMPIGAILVSPEVSEVIHSQSNTL--GSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFSD 353 (447)
Q Consensus 278 g~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~t~~~~~~~~~aa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~ 353 (447)
+ .++|+++.+++............ .........+.++..+.+..++++.+.. ++..++.+++.+++++.|+++ +
T Consensus 204 p-~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~-g 281 (353)
T TIGR03235 204 P-KGIGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTL-G 281 (353)
T ss_pred C-CceEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC-C
Confidence 3 46899999887432211000000 0000011233455556666667776542 345677777778888777653 2
Q ss_pred CCceeeE-eeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee
Q 013204 354 SPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS 405 (447)
Q Consensus 354 ~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~ 405 (447)
..+...- .....++.+.+... ....+.+.|. ++|.++++
T Consensus 282 ~~~~~~~~~~~~~i~~~~~~~~------------~~~~v~~~L~-~~i~v~~g 321 (353)
T TIGR03235 282 VKLNGDPAETIPHILNFSIDGV------------NSEALIVNLR-ADAAVSTG 321 (353)
T ss_pred eEEeCCcccccCCEEEEEeCCc------------CHHHHHHHHh-CCeEEEch
Confidence 2222111 11122334433211 1345667775 48888755
No 272
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.66 E-value=1.3e-14 Score=141.27 Aligned_cols=237 Identities=15% Similarity=0.167 Sum_probs=142.2
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
..+...++++.+++.+ +.+.+++++||++|+..+++... ..+++||+..+.| |.+...... ..
T Consensus 52 ~~p~~~~le~~la~l~---g~~~~~~~~sG~~Ai~~al~al~--------~~Gd~Vl~~~~~~-~~t~~~~~~-----~~ 114 (380)
T TIGR01325 52 ANPTVAAFEERIAALE---GAERAVATATGMSAIQAALMTLL--------QAGDHVVASRSLF-GSTVGFISE-----IL 114 (380)
T ss_pred CCchHHHHHHHHHHHh---CCCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEecCCc-chHHHHHHH-----HH
Confidence 4566788999999886 33578899999999999998653 2346677765544 443221110 00
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
..++. .+..++..+ .+++++.+. +++++|++|.+++..|.+.+ +++|.++|
T Consensus 115 ~~~g~---~v~~v~~~d------------------~~~l~~~i~----~~tklV~le~p~np~g~~~d----l~~I~~la 165 (380)
T TIGR01325 115 PRFGI---EVSFVDPTD------------------LNAWEAAVK----PNTKLVFVETPSNPLGELVD----IAALAELA 165 (380)
T ss_pred HHhCC---EEEEECCCC------------------HHHHHHhcC----CCceEEEEECCCCCCCeeeC----HHHHHHHH
Confidence 00111 111222211 255665553 35678888888777777765 99999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccce-eEEEeChhHHHHhhhccCCCCccCcCCCC
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFSHGFTY 311 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 311 (447)
+++|+++|+||+++.. ... ......+|+++ ++|.++|++..+ |++++++++++.+..... .. ..
T Consensus 166 ~~~gi~livD~a~~~~-~~~-----~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~-----~~--g~ 232 (380)
T TIGR01325 166 HAIGALLVVDNVFATP-VLQ-----QPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLR-----HT--GP 232 (380)
T ss_pred HHcCCEEEEECCCccc-ccC-----CchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHH-----hh--CC
Confidence 9999999999998632 111 11223468876 679998854555 677788888777653210 11 22
Q ss_pred CCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-----CCcee----------eEeeeeeEEEEEee
Q 013204 312 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFA 372 (447)
Q Consensus 312 ~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~~~~~g~~~~i~~~ 372 (447)
..+|..+..++..++.+.. ..++..++..++.+.|++.+. +|... ...+.|.++.+++.
T Consensus 233 ~~~p~~a~~~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~ 306 (380)
T TIGR01325 233 AMSPFNAWVLLKGLETLSL--RMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA 306 (380)
T ss_pred CCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence 3345555555555554432 245555566666666665421 22111 12356888888886
No 273
>PLN03032 serine decarboxylase; Provisional
Probab=99.65 E-value=4.5e-13 Score=128.60 Aligned_cols=314 Identities=12% Similarity=0.068 Sum_probs=187.4
Q ss_pred CHHHHHHHHHHHhcC-CcccccC--c-CCChHHHHHHHHHHHhcCcCCCCeE--EEeCChhhHHHHHHHHHHHHHHhcCC
Q 013204 51 EPRLVAAATAQLNTL-PFYHSFW--N-RTTKPSLDLAKELLEMFTASKMAKV--FFTNSGSEANDTQVKLVWYYNNALGR 124 (447)
Q Consensus 51 ~p~v~~a~~~~~~~~-~~~~~~~--~-~~~~~~~~l~~~l~~~~~~~~~~~v--~~~~sGseA~~~Al~~~~~~~~~~~~ 124 (447)
++.+++++.+...+. +..++.. + ...+...+..+.+++++. .+.+.+ +||+||||||..|+..++.+.
T Consensus 36 ~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg-~~~~~~~G~fTsGGTEaNl~al~~ar~~~----- 109 (374)
T PLN03032 36 DYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE-LEKDEYWGYITTCGTEGNLHGILVGREVF----- 109 (374)
T ss_pred ChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhC-CCCccCCEEEeCchHHHHHHHHHHHHHhC-----
Confidence 456777888777542 2111111 1 134455567777777774 344444 999999999999999887431
Q ss_pred CCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCc
Q 013204 125 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET 204 (447)
Q Consensus 125 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~ 204 (447)
. ..+++....-|-+..-+...-+.. ...++..... ..++++|++.+.... ..
T Consensus 110 -~-~~~vi~s~~~H~Sv~kaa~~lg~~------------~~~V~~d~~g-------------~id~~~L~~~i~~~~-~~ 161 (374)
T PLN03032 110 -P-DGILYASRESHYSVFKAARMYRME------------AVKVPTLPSG-------------EIDYDDLERALAKNR-DK 161 (374)
T ss_pred -C-CcEEEeCCCceeHHHHHHHHcCCC------------CeEeeeCCCC-------------cCcHHHHHHHHHHcC-CC
Confidence 1 236777888888765554433321 1122221111 122588888886432 24
Q ss_pred EEEEEEccccCCCCCccCChhHHHHHHHHHHhcC-----CEEEEehhhcCCCcccc-----ccccccCCCCCCeeeec--
Q 013204 205 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD-----ILFIADEVICAFGRLGT-----MFGCDKYSIKPDLVSFA-- 272 (447)
Q Consensus 205 ~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g-----~~li~DEv~~g~g~~g~-----~~~~~~~~~~~d~v~~s-- 272 (447)
+.+|++...+++.|.+.| +++|.++|++|| +++++|-++.|+ .... .+.+ ....|.++++
T Consensus 162 ~~lvv~tagtt~tG~idp----i~eI~~i~~~~g~~~~~~~lHvDaA~gg~-~~p~~~~~~~~~~---~~~vDSis~s~H 233 (374)
T PLN03032 162 PAILNVNIGTTVKGAVDD----LDRILRILKELGYTEDRFYIHCDGALFGL-MMPFVSRAPEVTF---RKPIGSVSVSGH 233 (374)
T ss_pred CEEEEEEecCcCCccCCC----HHHHHHHHHHhCCCCCCeeEEEEccchhh-hhhccCCCcccCC---CcCCcEEEECcc
Confidence 567777778888898988 999999999997 589999998754 2210 1111 1247888887
Q ss_pred ccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCC--cHHHHHHHHHHHHHHhhhcH---HHHHHHHHHHHHHh
Q 013204 273 KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG--HPVSCAVAIEALKIYKERNI---VEQVNKIAPKFQDG 347 (447)
Q Consensus 273 K~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~--~~~~~~aa~a~l~~~~~~~~---~~~~~~~~~~l~~~ 347 (447)
|.++.+ .++|+++.+++..+.+.........- ..|..+ +....++.+++|+.+..+++ .++..++.+++.+.
T Consensus 234 K~~g~P-~g~G~ll~r~~~~~~~~~~~~Yl~~~--d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~ 310 (374)
T PLN03032 234 KFLGCP-MPCGVALTRKKHVKALSQNVEYLNSR--DATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDR 310 (374)
T ss_pred cccCCC-cCeEEEEEEchhhHhhccCCcccCCC--CCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 544446 78999999987776554322111111 112322 33455667777777666554 45566677778787
Q ss_pred HhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeCCEEEEecCCCCCHHHHHHHHH
Q 013204 348 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELIS 427 (447)
Q Consensus 348 L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g~~iR~~~~~~~t~e~i~~~~~ 427 (447)
|++. +.. ......... +-|..+. . .. ..+|..+....+.++++...-++.+.+|++++
T Consensus 311 l~~~-~~~--~~~~p~~~~--V~f~~~~------------~----~~-~~~~w~l~~~~~~~hi~vm~~~~~~~id~fi~ 368 (374)
T PLN03032 311 LTEA-GLT--CRLNELSST--VVFERPM------------D----EA-FIKKWQLACEGDIAHVVVMPNVTVEKLDEFVE 368 (374)
T ss_pred HHhC-CCc--EEECCCceE--EEEcCCC------------c----Hh-HhheeeecccCCEEEEEECCCCCHHHHHHHHH
Confidence 7764 222 122222222 2333321 0 11 22466666555677777776688999999998
Q ss_pred HHHH
Q 013204 428 KYGK 431 (447)
Q Consensus 428 ~l~~ 431 (447)
-|++
T Consensus 369 dl~~ 372 (374)
T PLN03032 369 ELVE 372 (374)
T ss_pred HHhc
Confidence 8765
No 274
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.65 E-value=3.1e-14 Score=138.93 Aligned_cols=235 Identities=17% Similarity=0.143 Sum_probs=146.7
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh---hcccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~ 151 (447)
..+...+++++++++. +.+.+++++||++|+..++.... ..++.||+..+.|++..... +...|..
T Consensus 62 ~~p~~~~le~~lA~l~---g~~~~i~~ssG~~Ai~~~l~all--------~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~ 130 (398)
T PRK08249 62 TNPTVQAFEEKVRILE---GAEAATAFSTGMAAISNTLYTFL--------KPGDRVVSIKDTYGGTNKIFTEFLPRMGVD 130 (398)
T ss_pred CChHHHHHHHHHHHHh---CCCeEEEeCChHHHHHHHHHHhc--------CCCCEEEEcCCchHHHHHHHHHHHhhCCeE
Confidence 5567788999999886 34578889999999999887553 33578999999997753211 1111111
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
+..++.. +++++++.+. +++++|++|..++..|.+.+ +++|.
T Consensus 131 ------------v~~vd~~------------------d~e~l~~~i~----~~tklV~ie~p~NPtg~v~d----l~~I~ 172 (398)
T PRK08249 131 ------------VTLCETG------------------DHEQIEAEIA----KGCDLLYLETPTNPTLKIVD----IERLA 172 (398)
T ss_pred ------------EEEcCCC------------------CHHHHHHhcC----CCCeEEEEECCCCCCCccCC----HHHHH
Confidence 1111111 1366666664 24667888777677777776 99999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccce-eEEEeChhHHHHhhhccCCCCccCcC
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFSHG 308 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (447)
++|++||+++|+|++|..+ ....+ .....|+++ ++|.++|.+-.+ |++++++++++.+... ...
T Consensus 173 ~la~~~gi~livD~t~a~~-~~~~~-----l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~-------~~~ 239 (398)
T PRK08249 173 AAAKKVGALVVVDNTFATP-INQNP-----LALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHY-------REI 239 (398)
T ss_pred HHHHHcCCEEEEECCcCcc-ccCCc-----hhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHH-------HHh
Confidence 9999999999999998733 21111 123467664 579998732344 6677788888777532 112
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhcc-----CCCcee----------eEeeeeeEEEEEeec
Q 013204 309 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD 373 (447)
Q Consensus 309 ~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~~~~~g~~~~i~~~~ 373 (447)
.....++..++.++..++.+. ...++..++.+.+.+.|++.+ .+|... ...|.|.++.+++..
T Consensus 240 ~g~~~s~~~a~l~l~~l~tL~--~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~ 317 (398)
T PRK08249 240 NGATMDPMSAYLILRGMKTLK--LRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKG 317 (398)
T ss_pred cCCCCCHHHHHHHHhCcchHH--HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcC
Confidence 234567777776666666543 234555666677777776531 122111 123568888888863
No 275
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.64 E-value=3.3e-13 Score=139.80 Aligned_cols=315 Identities=11% Similarity=0.106 Sum_probs=188.0
Q ss_pred ChHHHHHHHHHHHhcCcCCCCeEEEeC-ChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 76 TKPSLDLAKELLEMFTASKMAKVFFTN-SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~~~~v~~~~-sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
.....++++.+++++ +++.+.+.+ +|+.++.+++..++.|+..+|++++++||+ ..+-||+........|..
T Consensus 542 lq~i~elq~~l~eLt---Gmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLI-p~saHgtNpasa~~~Gie--- 614 (954)
T PRK12566 542 RAMIDELEAWLCAIT---GFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLI-PSSAHGTNPASAQMAGMR--- 614 (954)
T ss_pred HHHHHHHHHHHHHHH---CCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEe-cccccccCHHHHHHCCCE---
Confidence 344567888888886 677777776 899999999999999999999877766655 557777754443322221
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
+..+++... +..++++|++.+.... +++++|++...+..|+...+ +++|+++|
T Consensus 615 ---------Vv~Vp~D~~-------------G~iDle~L~a~I~~~~-~~laaVmiT~Pnt~Gv~e~~----V~eI~~ia 667 (954)
T PRK12566 615 ---------VVIVECDPD-------------GNVDLDDLKAKAAAAG-DRLSCLMITYPSTHGVYEEG----IREICEVV 667 (954)
T ss_pred ---------EEEeccCCC-------------CCcCHHHHHHHhhccC-CCEEEEEEEecCcCceecch----HHHHHHHH
Confidence 122222111 1122588888886433 46777777766655543322 99999999
Q ss_pred HhcCCEEEEehhhcCCCcccccccccc-CCCCCCeeeec--ccCC----CcccceeEEEeChhHHHHhhhcc--C----C
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDK-YSIKPDLVSFA--KALS----SAYMPIGAILVSPEVSEVIHSQS--N----T 301 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~-~~~~~d~v~~s--K~l~----gg~~~~g~~~~~~~~~~~~~~~~--~----~ 301 (447)
+++|+++++|-++. .+.. .... -.+..|+++++ |.|+ +|++.+|.+..++.+...+...+ . .
T Consensus 668 h~~Galv~vDgA~~-~a~~----~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~ 742 (954)
T PRK12566 668 HQHGGQVYMDGANL-NAQV----GLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPD 742 (954)
T ss_pred HHcCCEEEEEeeCh-hhcc----CCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCC
Confidence 99999999998875 2111 1111 12457998876 8654 45566777777776666554321 0 0
Q ss_pred CCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHH---HHHHHHHHHHHhHhhccCCCceeeE-eee-eeEEEEEeecCCC
Q 013204 302 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVE---QVNKIAPKFQDGVKAFSDSPIIGEI-RGT-GLILGTEFADNKS 376 (447)
Q Consensus 302 ~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~---~~~~~~~~l~~~L~~l~~~~~~~~~-~~~-g~~~~i~~~~~~~ 376 (447)
.+........+++.+.+.+++.-+..+..+ +.+ ....+..+++++|.+. +++...- .+. ..-+.+++..-+.
T Consensus 743 ~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~--~~v~~~~~~~~~~hEfii~~~~l~~ 819 (954)
T PRK12566 743 PNNGAVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGA--FPVLYRGRNERVAHECILDLRPLKA 819 (954)
T ss_pred CCCCceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhh--CCCCcCCCCCCeeeEEEEEcccccc
Confidence 110011112223333344444445544444 322 2234677888888653 2221110 001 0111223221110
Q ss_pred CCCCCCCCcchHHHHHHHHHHcCceEE----eeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 377 PNEPFPPEWGIGAYFGAQCEKHGMLVR----VSGDNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
... .....+.++|++.|++.. +..+.+|++|.-..+++|||+++++|++..+++++
T Consensus 820 ~~g------~~~~dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~ 879 (954)
T PRK12566 820 QTG------ISEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIGK 879 (954)
T ss_pred ccC------CCHHHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 000 013568889999998865 33567999999999999999999999999888654
No 276
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.63 E-value=4.9e-14 Score=137.49 Aligned_cols=239 Identities=14% Similarity=0.081 Sum_probs=144.6
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
..+...+|+++++++. +.+.+++++||+.|+..++.... ..+++|++..+.|.+..........
T Consensus 57 ~~p~~~~le~~lA~l~---g~~~av~~~sG~~Ai~~~l~al~--------~~Gd~Vi~~~~~y~~t~~~~~~~~~----- 120 (391)
T TIGR01328 57 GNPTVSNLEGRIAFLE---GTEAAVATSSGMGAIAATLLTIL--------KAGDHLISDECLYGCTFALLEHALT----- 120 (391)
T ss_pred CCchHHHHHHHHHHHh---CCCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEecCcchHHHHHHHHHHh-----
Confidence 4556788999999996 34468899999999998887653 3346788877777544321111000
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
.++ ..+..++.. +++++++.+. +++++|++|.+++..|.+.+ +++|.++|
T Consensus 121 -~~G---~~~~~vd~~------------------d~e~l~~~i~----~~tklV~le~p~Np~G~v~d----l~~I~~la 170 (391)
T TIGR01328 121 -KFG---IQVDFINMA------------------IPEEVKAHIK----DNTKIVYFETPANPTMKLID----MERVCRDA 170 (391)
T ss_pred -cCC---eEEEEECCC------------------CHHHHHHhhc----cCCeEEEEECCCCCCCcccC----HHHHHHHH
Confidence 000 001122221 1356666554 34668888877777776666 99999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccc-eeEEEeChhHHHHhhhccCCCCccCcCCCC
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMP-IGAILVSPEVSEVIHSQSNTLGSFSHGFTY 311 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 311 (447)
+++|+++|+||++. .+..+.+ .+...|+++ ++|.+++.+.+ .|++++++++++.++.... ......
T Consensus 171 ~~~gi~livD~a~a-~~~~~~~-----~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~-----~~~~g~ 239 (391)
T TIGR01328 171 HSQGVKVIVDNTFA-TPMLTNP-----VALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGI-----KDMTGS 239 (391)
T ss_pred HHcCCEEEEECCCc-hhccCCc-----hhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHH-----HhCCCC
Confidence 99999999999986 2222222 123467765 56999874344 4777888888877753110 001123
Q ss_pred CCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-----CCcee----------eEeeeeeEEEEEee
Q 013204 312 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFA 372 (447)
Q Consensus 312 ~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~~~~~g~~~~i~~~ 372 (447)
..+|..++.++..|+.+ +...++..++..++.+.|++.+. +|... ..++.|.++.+++.
T Consensus 240 ~l~~~~a~l~l~~L~tl--~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~ 313 (391)
T TIGR01328 240 VISPFDAWLILRGLKTL--NIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELK 313 (391)
T ss_pred CCCcHHHHHHHhCcCcH--HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeC
Confidence 44666666666555433 22356666677777777765422 11110 12355778888885
No 277
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.63 E-value=4e-13 Score=142.44 Aligned_cols=315 Identities=13% Similarity=0.105 Sum_probs=183.9
Q ss_pred hHHHHHHHHHHHhcCcCCCCeEEEeC-ChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccC
Q 013204 77 KPSLDLAKELLEMFTASKMAKVFFTN-SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 155 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~~v~~~~-sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 155 (447)
....++.+++++++ +++.+.+.. +|+.|+..++..++.+...+|+..+++ ++...+-|++........|..
T Consensus 542 ~~i~e~q~~l~elt---G~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~-vlis~~aH~snp~sa~~~G~~---- 613 (954)
T PRK05367 542 ELIDQLEAWLAEIT---GYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDV-CLIPSSAHGTNPASAVMAGMK---- 613 (954)
T ss_pred HHHHHHHHHHHHHH---CCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCE-EEEEchhhhhhHHHHHHCCCE----
Confidence 45567888888886 455566665 778888888878887776666544444 555677888765544333321
Q ss_pred CCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHH
Q 013204 156 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 235 (447)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~ 235 (447)
+..+++... +..++++|++.+.... .++++|++......|+...+ +++|+++|+
T Consensus 614 --------vv~v~~d~~-------------G~iD~~~L~~~i~~~~-~~la~V~it~pst~G~~e~~----I~eI~~i~h 667 (954)
T PRK05367 614 --------VVVVACDEN-------------GNIDLDDLRAKAEEHA-DNLAAIMITYPSTHGVFEET----IREICEIVH 667 (954)
T ss_pred --------EEEECCCCC-------------CCcCHHHHHHHHhccC-CCeEEEEEEcCCCCeeecCC----HHHHHHHHH
Confidence 122222111 0112477887776422 35666666554444433344 999999999
Q ss_pred hcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCC----CcccceeEEEeChhHHHHhhhccCCCCccCc-C
Q 013204 236 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALS----SAYMPIGAILVSPEVSEVIHSQSNTLGSFSH-G 308 (447)
Q Consensus 236 ~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~----gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~ 308 (447)
++|+++++|.++.+. ..+.. ..-.+..|+++++ |.|+ +|+..+|++.+++.+...+-...-....... .
T Consensus 668 ~~G~~v~VDgA~~~a-l~~l~---~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~ 743 (954)
T PRK05367 668 EHGGQVYLDGANMNA-QVGLA---RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGI 743 (954)
T ss_pred HcCCEEEEECcChhh-ccCCC---ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCc
Confidence 999999999998521 12110 1112347998876 8654 4557788888887766555322100000000 0
Q ss_pred CCCCCcHH----HHHHHHHHHHHHhhhcHHHHHH---HHHHHHHHhHhhccCCCcee---eEeeeeeEEEEEeecCCCCC
Q 013204 309 FTYSGHPV----SCAVAIEALKIYKERNIVEQVN---KIAPKFQDGVKAFSDSPIIG---EIRGTGLILGTEFADNKSPN 378 (447)
Q Consensus 309 ~t~~~~~~----~~~aa~a~l~~~~~~~~~~~~~---~~~~~l~~~L~~l~~~~~~~---~~~~~g~~~~i~~~~~~~~~ 378 (447)
++....+. .+..++..+..+..+++.+..+ .+.+++.++|++........ .+..+ +.+++...+...
T Consensus 744 g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e---~i~~~~~~~~~~ 820 (954)
T PRK05367 744 GAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHE---CILDLRPLKEST 820 (954)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccc---eEEEeecccccC
Confidence 11121222 2222444455555566665555 68888888886641111110 01111 122332111000
Q ss_pred CCCCCCcchHHHHHHHHHHcCceEEee----CCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 379 EPFPPEWGIGAYFGAQCEKHGMLVRVS----GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 379 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~----g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
......+.++|.+.|+..... .+.+|++|.-..+++|||+++++|.+...++++
T Consensus 821 ------g~~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 821 ------GITVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred ------CCCHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 002456899999999987642 467999999999999999999999998888765
No 278
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.63 E-value=2.4e-13 Score=130.46 Aligned_cols=320 Identities=11% Similarity=0.023 Sum_probs=185.3
Q ss_pred CCHHHHHHHHHHHhcCCc----ccccCcCCC---hHHHHHHHHHHHhcCcCCCCeEEEeC-ChhhHHHHHHHHHHHHHHh
Q 013204 50 SEPRLVAAATAQLNTLPF----YHSFWNRTT---KPSLDLAKELLEMFTASKMAKVFFTN-SGSEANDTQVKLVWYYNNA 121 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~~----~~~~~~~~~---~~~~~l~~~l~~~~~~~~~~~v~~~~-sGseA~~~Al~~~~~~~~~ 121 (447)
.|..|++++.+...+... .+....... +...+..+.+.+++......+|+|++ |||+|++.++..+.
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~----- 77 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL----- 77 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC-----
Confidence 466889999988874321 111111122 44556677788777422234677775 49999999998663
Q ss_pred cCCCCcceEEEEcCCCccchhhhhccc-CCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhh
Q 013204 122 LGRPNKKKFIARQKSYHGSTLIAASLS-GLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE 200 (447)
Q Consensus 122 ~~~~~~~~vi~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~ 200 (447)
.+.++++++..++.|.....+... |... .+..++...+ .+ ..++++...+
T Consensus 78 ---~~~~~~l~i~~G~fg~r~~~~a~~~g~~~-------------~~~~~~~~~~---~~---------~~~~~~~~~~- 128 (349)
T TIGR01364 78 ---AEGKVADYIVTGAWSKKAAKEAKKYGVVN-------------VVASGKEGNY---TK---------IPDPSTWEIS- 128 (349)
T ss_pred ---CCCCeEEEEECCHHHHHHHHHHHHhCCcE-------------EEeccccCCC---CC---------CCCHHhcCCC-
Confidence 234677777777767644333211 1100 0010000000 00 0112211111
Q ss_pred CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCCCc
Q 013204 201 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSA 278 (447)
Q Consensus 201 ~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~gg 278 (447)
.++.+|.+..+-+++|...+ ++++.+++++++|-+++ +|.. +...+. -|++++| |.++ +
T Consensus 129 --~~~~~v~~th~ETstGv~~~---------~l~~~~~~l~iVDavss-~g~~--~id~~~----~d~~~~ssqK~lg-P 189 (349)
T TIGR01364 129 --EDAAYVHYCANETIHGVEFR---------ELPDVKNAPLVADMSSN-ILSR--PIDVSK----FGLIYAGAQKNIG-P 189 (349)
T ss_pred --CCCCEEEEcCCCCcccEecc---------eecccCCCeEEEEcccc-ccCc--cCCHHH----ccEEEEecccccC-C
Confidence 24556777676666676543 66777899999999987 4322 222222 2477665 8885 5
Q ss_pred ccceeEEEeChhHHHHhhhccCCCCc----cCcCCC-CCCcHHHHHHHHHHHHHHhhh-c---HHHHHHHHHHHHHHhHh
Q 013204 279 YMPIGAILVSPEVSEVIHSQSNTLGS----FSHGFT-YSGHPVSCAVAIEALKIYKER-N---IVEQVNKIAPKFQDGVK 349 (447)
Q Consensus 279 ~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~t-~~~~~~~~~aa~a~l~~~~~~-~---~~~~~~~~~~~l~~~L~ 349 (447)
.++|+++.++++.+.+......... .....+ ++++...+.+..++|+.+.+. + +.++.+++.+++++.|+
T Consensus 190 -~Glg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~ 268 (349)
T TIGR01364 190 -AGLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTID 268 (349)
T ss_pred -CceEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 6799999999988776432110000 001122 355556666677888887665 3 44666677778888888
Q ss_pred hccCCCce-ee-EeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC---CEEEEecCCCCCHHHHHH
Q 013204 350 AFSDSPII-GE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVDE 424 (447)
Q Consensus 350 ~l~~~~~~-~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g---~~iR~~~~~~~t~e~i~~ 424 (447)
++.+.... .. ......++.+.++... +...+...+.++|+++.++. +.+|+++...+|+|||++
T Consensus 269 ~~~gl~~~~~~~~~rs~~v~sf~~~~~~-----------~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~ 337 (349)
T TIGR01364 269 NSNGFYRNPVDPRNRSRMNVVFTLGNEE-----------LEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQA 337 (349)
T ss_pred hCCCeeccCCCHHHcCCeEEEEecCChh-----------HhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHH
Confidence 77322111 11 0111233444443221 22446678889999655442 569999999999999999
Q ss_pred HHHHHHHHHH
Q 013204 425 LISKYGKALK 434 (447)
Q Consensus 425 ~~~~l~~~l~ 434 (447)
++++|++.++
T Consensus 338 l~~al~~~~~ 347 (349)
T TIGR01364 338 LVDFMKEFQK 347 (349)
T ss_pred HHHHHHHHHH
Confidence 9999998664
No 279
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.63 E-value=4.2e-14 Score=138.47 Aligned_cols=214 Identities=13% Similarity=0.109 Sum_probs=135.1
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh---hcccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~ 151 (447)
+.+...+|++++++++. .+.+++++||+.|+..++.... ..+++||+..+.|....... +...|..
T Consensus 62 ~~p~~~~Le~~iA~~~g---~~~~l~~~sG~~Ai~~al~~ll--------~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~ 130 (400)
T PRK06234 62 GNPTSTEVENKLALLEG---GEAAVVAASGMGAISSSLWSAL--------KAGDHVVASDTLYGCTFALLNHGLTRYGVE 130 (400)
T ss_pred CCccHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHHHHh--------CCCCEEEEecCccchHHHHHHHHHhhCCeE
Confidence 45667899999999973 3468999999999998887543 33467888777765543221 1111111
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
+..++.. +++++++.+. +++++|++|.+++..|.+.+ +++|.
T Consensus 131 ------------v~~vd~~------------------d~e~l~~~i~----~~tklI~iesP~NPtG~v~d----l~~I~ 172 (400)
T PRK06234 131 ------------VTFVDTS------------------NLEEVRNALK----ANTKVVYLETPANPTLKVTD----IKAIS 172 (400)
T ss_pred ------------EEEECCC------------------CHHHHHHHhc----cCCeEEEEECCCCCCCCcCC----HHHHH
Confidence 1111111 1366777664 24567888877777777766 99999
Q ss_pred HHHHhc--CCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccce-eEEEeChhHHHHhhhccCCCCccC
Q 013204 232 AVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFS 306 (447)
Q Consensus 232 ~l~~~~--g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 306 (447)
++|+++ |+++|+||+|... ..+.+ .+...|+++ ++|.++|.+.++ |++++++++++.+.... ..
T Consensus 173 ~la~~~~~~i~livDea~~~~-~~~~~-----l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~-----~~ 241 (400)
T PRK06234 173 NIAHENNKECLVFVDNTFCTP-YIQRP-----LQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFG-----IK 241 (400)
T ss_pred HHHHhcCCCCEEEEECCCCch-hcCCc-----hhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHH-----HH
Confidence 999997 9999999998632 22211 122467765 579998744554 88889998877765210 01
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhh
Q 013204 307 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 350 (447)
Q Consensus 307 ~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~ 350 (447)
...+...+|..++.++..++-+ +...++..++..++.+.|++
T Consensus 242 ~~~g~~l~p~~a~l~~~~l~tl--~~r~~~~~~na~~~a~~L~~ 283 (400)
T PRK06234 242 DMTGSVIGPFEAFLIIRGMKTL--QIRMEKHCKNAMKVAKFLES 283 (400)
T ss_pred HhcCCCCCHHHHHHHHhccCcH--HHHHHHHHHHHHHHHHHHHc
Confidence 1123455777776666666533 22345555666777777765
No 280
>PRK06460 hypothetical protein; Provisional
Probab=99.62 E-value=9.7e-14 Score=134.78 Aligned_cols=235 Identities=16% Similarity=0.144 Sum_probs=139.0
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchh---hhhcccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL---IAASLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~---~~~~~~~~~ 151 (447)
..+...+++++++++.. .+..+.++||++|+..++.... ..+++|++..+.|.+... ..+...|..
T Consensus 43 ~~p~~~~L~~~lA~l~g---~~~~v~~~sG~~ai~~~l~al~--------~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~ 111 (376)
T PRK06460 43 ANPTVLELTKKIVELEN---AEMGVAFSSGMGAISTTALALL--------KPGNSVLVHRDMFGRSYRFFTDYLKNWGVN 111 (376)
T ss_pred CCccHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEecCCcCcHHHHHHHHHHhhCcE
Confidence 45667889999998863 2335566889999998887653 334678887766644321 111111111
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
+..++. .+ .+.+++++. +++++|+++.+++..|.+.+ +++|.
T Consensus 112 ------------v~~~~~----------~~--------~~~l~~~~~----~~tklV~l~sp~NPtG~v~d----~~~I~ 153 (376)
T PRK06460 112 ------------VDASNP----------GS--------DNIIEKAKS----KRYDVVFVENITNPLLRVVD----ITELS 153 (376)
T ss_pred ------------EEEECC----------CC--------HHHHHHhcC----CCceEEEEECCCCCCCcccC----HHHHH
Confidence 111111 00 022333322 35667888888777787776 78999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee--eecccCCCc-ccceeEEEeChhHHHHhhhccCCCCccCcC
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSA-YMPIGAILVSPEVSEVIHSQSNTLGSFSHG 308 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v--~~sK~l~gg-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (447)
++|++||+++|+||+|... ... .......|++ +++|.++|. ...+|++++++++++.+... ...
T Consensus 154 ~la~~~g~~vivDea~~~~-~~~-----~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~-------~~~ 220 (376)
T PRK06460 154 KVCKENGSILIVDATFSTP-INQ-----KPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQM-------RRT 220 (376)
T ss_pred HHHHHcCCEEEEECCcCcc-ccC-----ChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHH-------HHh
Confidence 9999999999999998632 111 1111225666 478998752 13588999999988877532 111
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-----CCcee----------eEeeeeeEEEEEeec
Q 013204 309 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFAD 373 (447)
Q Consensus 309 ~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~~~~~g~~~~i~~~~ 373 (447)
...+.+|..+..++..++.++ ...++..++.+++.+.|++.+. +|... ...+.|.++.+++..
T Consensus 221 ~g~~~~~~~a~~~l~~~~~l~--~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~ 298 (376)
T PRK06460 221 LGTSLDPHAAYLTLRGIKTLK--IRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNG 298 (376)
T ss_pred cCCCCCHHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 123345544444444444432 3456677777888777775421 12111 123678888888863
No 281
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.61 E-value=8e-14 Score=136.04 Aligned_cols=234 Identities=15% Similarity=0.144 Sum_probs=138.8
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh---hcccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~ 151 (447)
..+...++++++++++ +.+.+++++||++|+..++..+. .++++||+..+.|.+..... +...|..
T Consensus 59 ~~p~~~~le~~la~l~---g~~~~v~~ssG~~Ai~~al~al~--------~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~ 127 (390)
T PRK08133 59 TNPTVTMFQERLAALE---GAEACVATASGMAAILAVVMALL--------QAGDHVVSSRSLFGSTVSLFEKIFARFGIE 127 (390)
T ss_pred CChHHHHHHHHHHHHh---CCCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEccCcchhHHHHHHHHHHHcCcE
Confidence 4566788999999886 34568999999999999988653 33467888776665543211 1111111
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
+..++..+ .+++++.+. +++++|++|.+++..|.+.+ +++|.
T Consensus 128 ------------v~~vd~~d------------------~~~l~~~i~----~~tklV~ie~p~NptG~v~d----l~~I~ 169 (390)
T PRK08133 128 ------------TTFVDLTD------------------LDAWRAAVR----PNTKLFFLETPSNPLTELAD----IAALA 169 (390)
T ss_pred ------------EEEECCCC------------------HHHHHHhcC----cCCeEEEEECCCCCCCCcCC----HHHHH
Confidence 11122111 266666664 35667888777777777765 89999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccce-eEEEeChhHHHHhhhccCCCCccCcC
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFSHG 308 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (447)
++|++||+++|+|+++... ....+ .....|+++ ++|.+++.+.++ |++++++++++.+... ...
T Consensus 170 ~la~~~gi~livD~t~~~~-~~~~p-----l~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~-------~~~ 236 (390)
T PRK08133 170 EIAHAAGALLVVDNCFCTP-ALQQP-----LKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGF-------LRT 236 (390)
T ss_pred HHHHHcCCEEEEECCCccc-ccCCc-----hhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHH-------HHH
Confidence 9999999999999998522 11111 112357765 579998755666 5666777766655421 111
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-----CCcee----------eEeeeeeEEEEEee
Q 013204 309 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFA 372 (447)
Q Consensus 309 ~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~~~~~g~~~~i~~~ 372 (447)
.....++..+..++..++.+. ...++..++...+.+.|++.+. +|... ...|.|.++.+++.
T Consensus 237 ~g~~~~~~~a~~~l~gl~tl~--~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~ 313 (390)
T PRK08133 237 AGPTLSPFNAWVFLKGLETLS--LRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVK 313 (390)
T ss_pred hCCCCCHHHHHHHHcccchHH--HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence 123345555555544444322 1234444555566666654321 12111 12466888888885
No 282
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.61 E-value=2.9e-13 Score=135.31 Aligned_cols=287 Identities=14% Similarity=0.159 Sum_probs=160.2
Q ss_pred HHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcc----cCCcccc
Q 013204 79 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL----SGLPALH 154 (447)
Q Consensus 79 ~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~----~~~~~~~ 154 (447)
..++.+.+++++ +.+.+.+.+++||+++++.++...+. .++++|++.++.| ++....+.. .|..
T Consensus 114 ~~e~~~~la~l~-g~~~~~v~~~~g~t~~~~~~~~a~~~-------~~g~~Vlv~~~~~-~~~~~~~~~~~~~~G~~--- 181 (447)
T PRK00451 114 IFEYQTMICELT-GMDVANASMYDGATALAEAALMAVRI-------TKRKKVLVSGAVH-PEYREVLKTYLKGQGIE--- 181 (447)
T ss_pred HHHHHHHHHHHh-CCCcceEEecCcHHHHHHHHHHHHHh-------cCCCEEEEeCccC-HHHHHHHHHHHHhCCcE---
Confidence 344556667776 34556889999999988877765421 1346777766544 443322211 1111
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
+..+++... ..+++++++.+. +++++|++... +..|.+.+ +++|.++|
T Consensus 182 ---------~~~v~~~~~--------------~~d~~~l~~~i~----~~t~~v~l~~p-n~tG~v~~----l~~I~~~a 229 (447)
T PRK00451 182 ---------VVEVPYEDG--------------VTDLEALEAAVD----DDTAAVVVQYP-NFFGVIED----LEEIAEIA 229 (447)
T ss_pred ---------EEEecCCCC--------------CCCHHHHHHhcC----CCeEEEEEECC-CCCCeeCC----HHHHHHHH
Confidence 111221100 011366776664 34666666655 44677765 99999999
Q ss_pred HhcCCEEEE--ehhhcCCCccccccccccCCCCCCeeee-----cccCCCcccceeEEEeChhHHHHhhhc---------
Q 013204 235 KKYDILFIA--DEVICAFGRLGTMFGCDKYSIKPDLVSF-----AKALSSAYMPIGAILVSPEVSEVIHSQ--------- 298 (447)
Q Consensus 235 ~~~g~~li~--DEv~~g~g~~g~~~~~~~~~~~~d~v~~-----sK~l~gg~~~~g~~~~~~~~~~~~~~~--------- 298 (447)
+++|+++++ |.+..|+ ... . .....|++++ ||.+..|++++|+++.++++++.+...
T Consensus 230 ~~~~~~~iv~~d~~~~g~--~~~---~--~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~ 302 (447)
T PRK00451 230 HAGGALFIVGVDPVSLGL--LKP---P--GEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDAD 302 (447)
T ss_pred HHCCCEEEEEcChHHhcc--CCC---c--ccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccC
Confidence 999999998 6553222 111 1 1234687754 454433337899999999888764210
Q ss_pred c-----------CCCCccCcCC-CCCCc-HHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHhHhhccCCCceeeEee
Q 013204 299 S-----------NTLGSFSHGF-TYSGH-PVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG 362 (447)
Q Consensus 299 ~-----------~~~~~~~~~~-t~~~~-~~~~~aa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~ 362 (447)
. .....+.+.. +.+.+ ++...++..+++.+.+ ++..++..++.+++++.|+++....+ ..+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~---~~~ 379 (447)
T PRK00451 303 GKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVEL---FDG 379 (447)
T ss_pred CCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEe---cCC
Confidence 0 0000111111 11111 1221223333443322 34556777788888888876622211 111
Q ss_pred eeeE--EEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEE----ee----CCEEEEecCCCCCHHHHHHHHHHHHHH
Q 013204 363 TGLI--LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VS----GDNIMMSPPFIMSPEEVDELISKYGKA 432 (447)
Q Consensus 363 ~g~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~----g~~iR~~~~~~~t~e~i~~~~~~l~~~ 432 (447)
..+ +.+.+. . ....+.++|+++|++.. +. .+.+|++++..+|+++|+++++.|++.
T Consensus 380 -~~~~~~~v~~~--~-----------~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~ 445 (447)
T PRK00451 380 -PFFNEFVVRLP--K-----------PAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEV 445 (447)
T ss_pred -CeEEEEEEecC--C-----------CHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 111 123331 1 13468899999988743 11 247999999889999999999999876
Q ss_pred H
Q 013204 433 L 433 (447)
Q Consensus 433 l 433 (447)
+
T Consensus 446 ~ 446 (447)
T PRK00451 446 L 446 (447)
T ss_pred h
Confidence 4
No 283
>PRK07049 methionine gamma-lyase; Validated
Probab=99.60 E-value=1.4e-13 Score=135.51 Aligned_cols=240 Identities=14% Similarity=0.108 Sum_probs=145.3
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhh---cccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~---~~~~~~ 151 (447)
+.+....|++.++++. +.+.+++++||+.|+..++..+. ..++.|++.++.|.+...... ...|..
T Consensus 81 ~~Pt~~~Le~~lA~le---g~~~~iv~~sG~~Ai~~~l~al~--------~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~ 149 (427)
T PRK07049 81 NHPNSEIVEDRLAVYE---GAESAALFSSGMSAIATTLLAFV--------RPGDVILHSQPLYGGTETLLAKTFRNFGVG 149 (427)
T ss_pred CCcCHHHHHHHHHHHh---CCCcEEEEccHHHHHHHHHHHHh--------CCCCEEEEcCCCcccHHHHHHHHHHhcCcE
Confidence 4555778999999886 34578999999999998887654 345789999999988743321 111211
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhh-CCCcEEEEEEccccCCCCCccCChhHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKV 230 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~-~~~~~a~vi~epv~~~~G~~~~~~~~l~~l 230 (447)
. +.+++ ..+ .+++++.+... ...++++|++|..++..|.+. + ++++
T Consensus 150 ~--------------v~~~~-------~~d--------~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~-d---~~~l 196 (427)
T PRK07049 150 A--------------VGFAD-------GLS--------EAAIGAAAEAAAAKGRVSLILIETPANPTNSLV-D---VAAV 196 (427)
T ss_pred E--------------EEEeC-------CCC--------HHHHHHHHHhhccCCCceEEEEECCCCCCCccc-C---HHHH
Confidence 0 11110 000 24555555321 123566777777777777555 4 4555
Q ss_pred HHHHHh------cCCEEEEehhhcCCCccccccccccCCCCCCee--eecccCCC-cccceeEEEeChhHHHHhhhccCC
Q 013204 231 QAVVKK------YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSS-AYMPIGAILVSPEVSEVIHSQSNT 301 (447)
Q Consensus 231 ~~l~~~------~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v--~~sK~l~g-g~~~~g~~~~~~~~~~~~~~~~~~ 301 (447)
.++++. +++++|+||++.+..... + . ....|++ ++||.++| +++++|++++++++++.+...
T Consensus 197 ~~la~~~~~~~~~~~~vvvDety~~~~~~~-p--l---~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~--- 267 (427)
T PRK07049 197 RRVADAIEARQGHRPIIACDNTLLGPVFQK-P--L---EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRAL--- 267 (427)
T ss_pred HHHHHHhhhcccCCCEEEEECCccccccCC-c--c---ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHH---
Confidence 555554 799999999976432111 1 1 1124666 57899995 458999999999988877632
Q ss_pred CCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-----CC-ce-e----------eEeeee
Q 013204 302 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SP-II-G----------EIRGTG 364 (447)
Q Consensus 302 ~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~-~~-~----------~~~~~g 364 (447)
........++..+..++..++.+. ...++..++...+.+.|++.+. +| .. . ...|.|
T Consensus 268 ----~~~~g~~ls~~~a~l~~r~L~tl~--~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g 341 (427)
T PRK07049 268 ----RSAIGTQLDPHSCWMLGRSLETLV--LRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAG 341 (427)
T ss_pred ----HHhcCCCCCHHHHHHHHcCCChHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCc
Confidence 111234456777777776665432 2234556666777777765422 22 10 0 113567
Q ss_pred eEEEEEeec
Q 013204 365 LILGTEFAD 373 (447)
Q Consensus 365 ~~~~i~~~~ 373 (447)
.++.+++..
T Consensus 342 ~~~s~~~~~ 350 (427)
T PRK07049 342 STFSFDIKG 350 (427)
T ss_pred cEEEEEEcC
Confidence 788888853
No 284
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.60 E-value=3.9e-12 Score=124.41 Aligned_cols=317 Identities=15% Similarity=0.118 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEE
Q 013204 52 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 131 (447)
Q Consensus 52 p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi 131 (447)
++-.+++.+.+...... ..+...++++.+++++ +.++.++++||++|+..+++.+. -.+++.||
T Consensus 10 ~~~~~~v~~~~~~~~~~------~g~~~~~le~~la~~~---g~~~~v~~~sgt~al~~~l~al~-------~~~Gd~Vi 73 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFLT------QGPTVPAFEEALAEYV---GAKYAVAFNSATSALHIACLALG-------VGPGDRVW 73 (380)
T ss_pred HHHHHHHHHHHhcCCcc------CChhHHHHHHHHHHHH---CCCeEEEEcCHHHHHHHHHHHcC-------CCCCCEEE
Confidence 45577777777654221 2344678889999887 33467778899999999998651 13347899
Q ss_pred EEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEc
Q 013204 132 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAE 211 (447)
Q Consensus 132 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~e 211 (447)
+..+.|++........+..+. .++.... . ...+++++++.+....++++.+|++.
T Consensus 74 v~~~~~~~~~~~~~~~G~~~~-------------~~~~~~~-----------~-~~~d~~~l~~~i~~~~~~~t~~v~~~ 128 (380)
T TIGR03588 74 TTPITFVATANCALYCGAKVD-------------FVDIDPD-----------T-GNIDEDALEKKLAAAKGKLPKAIVPV 128 (380)
T ss_pred eCCcchHHHHHHHHHcCCEEE-------------EEecCCC-----------c-CCcCHHHHHHHhhcccCCCceEEEEe
Confidence 888888776433332222111 1111000 0 00113777777753211244555532
Q ss_pred cccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCC--CCCeeeec----ccCCCcccceeEE
Q 013204 212 PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI--KPDLVSFA----KALSSAYMPIGAI 285 (447)
Q Consensus 212 pv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~--~~d~v~~s----K~l~gg~~~~g~~ 285 (447)
. ..|...+ +++|.++|++||+++|.|++|+ +|.. +.....|. ..|+.++| |.++.| ..|++
T Consensus 129 ~---~~G~~~~----~~~i~~l~~~~~~~lI~D~a~a-~g~~---~~~~~~g~~~~~d~~~~S~~~~K~~~~~--~GG~v 195 (380)
T TIGR03588 129 D---FAGKSVD----MQAIAALAKKHGLKIIEDASHA-LGAE---YGGKPVGNCRYADATVFSFHPVKIITTA--EGGAV 195 (380)
T ss_pred C---CCCccCC----HHHHHHHHHHcCCEEEEECCCc-ccCc---cCCEeCCCccccceEEEecCCCCccccc--CceEE
Confidence 2 2455544 8999999999999999999998 4321 11122233 34888776 777654 34555
Q ss_pred Ee-ChhHHHHhhhccCC-----C----------Ccc---CcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHH
Q 013204 286 LV-SPEVSEVIHSQSNT-----L----------GSF---SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQD 346 (447)
Q Consensus 286 ~~-~~~~~~~~~~~~~~-----~----------~~~---~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~ 346 (447)
+. ++++.+.++..... . ..+ ..+..+..+.+..+.+++.|+.+ ++..++.+++.+++.+
T Consensus 196 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l--~~~~~~r~~~~~~~~~ 273 (380)
T TIGR03588 196 TTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL--DRFVAKRREIAARYDR 273 (380)
T ss_pred EECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 54 56676655421000 0 000 00112233445555555555543 4556777788888888
Q ss_pred hHhhccCCCceeeE---eeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee--------------C---
Q 013204 347 GVKAFSDSPIIGEI---RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------------G--- 406 (447)
Q Consensus 347 ~L~~l~~~~~~~~~---~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------------g--- 406 (447)
.|..+......... ...-.+..+.+...... ....+.+.|.++||.+... +
T Consensus 274 ~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~ 344 (380)
T TIGR03588 274 LLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGC---------TRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGD 344 (380)
T ss_pred HhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCC---------CHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCC
Confidence 88776322211110 01112223333321100 1456888899999876511 0
Q ss_pred ---------CEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 407 ---------DNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 407 ---------~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
..+++..+...|++|++.+++.|++++
T Consensus 345 ~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 345 LPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred CcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 347777777889999999999998764
No 285
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.60 E-value=1.8e-13 Score=132.26 Aligned_cols=318 Identities=14% Similarity=0.095 Sum_probs=183.4
Q ss_pred CCHHHHHHHHHHHhcCC-cccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEe-CChhhHHHHHHHHHHHHHHhcCCCCc
Q 013204 50 SEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFT-NSGSEANDTQVKLVWYYNNALGRPNK 127 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~-~sGseA~~~Al~~~~~~~~~~~~~~~ 127 (447)
-+|+|++++.+...... ..|+. ....+...+..+.+.+++.-.+..+|+|+ .|||.+++.++..+. .
T Consensus 14 ~~~~v~~a~~~~~~~~~~~~hr~-~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~--------~-- 82 (361)
T TIGR01366 14 VRLEQLQALTTTAASLFGTSHRQ-APVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLI--------E-- 82 (361)
T ss_pred CCHHHHHHHHhcCccccccCcCC-hHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcc--------c--
Confidence 47889988775432211 12221 11234556677788888743233478886 679999999998652 1
Q ss_pred ceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEE
Q 013204 128 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAA 207 (447)
Q Consensus 128 ~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~ 207 (447)
++++++..+.+|.......... +... .+..++++.. +.++..+ ..++++
T Consensus 83 ~~~l~i~~G~~~~~~~~~a~~~-~~~~--------~~~~~~~~~~------------------~~~~~~~----~~~~~l 131 (361)
T TIGR01366 83 KKSLHLSFGEFSSKFAKAVKLA-PWLG--------EPIIVTADPG------------------SAPEPQA----DPGVDV 131 (361)
T ss_pred ccccEEecCHHHHHHHHHHHhh-hccC--------CceEEecCCC------------------CCCCCcc----CCCCCE
Confidence 1344444565665433332111 0000 0111121110 0011111 235778
Q ss_pred EEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCCCcccceeEE
Q 013204 208 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAI 285 (447)
Q Consensus 208 vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~gg~~~~g~~ 285 (447)
|.+..+.+..|.+.| +++| ++++|+++|+|-+++ +|.. +...+ ..|++++| |.+++. .+++++
T Consensus 132 V~~~h~et~tG~~~p----i~~I---~~~~g~~~iVDavqs-~g~~--~idv~----~~D~~~~s~~K~lg~~-~Gl~~~ 196 (361)
T TIGR01366 132 IAWAHNETSTGVAVP----VRRP---EGSDDALVVIDATSG-AGGL--PVDIA----ETDVYYFAPQKNFASD-GGLWLA 196 (361)
T ss_pred EEEcccCCccceecc----cccc---cccCCCeEEEEcCcc-ccCC--CCCHH----HCCEEEEEchhhcCCC-CceEEE
Confidence 888888888888887 5555 689999999999998 5322 22222 15888876 888764 356677
Q ss_pred EeChhHHHHhhhccCC------C--------CccCcCCCCCCcHHHHHHHHHHHHHHhhh-c---HHHHHHHHHHHHHHh
Q 013204 286 LVSPEVSEVIHSQSNT------L--------GSFSHGFTYSGHPVSCAVAIEALKIYKER-N---IVEQVNKIAPKFQDG 347 (447)
Q Consensus 286 ~~~~~~~~~~~~~~~~------~--------~~~~~~~t~~~~~~~~~aa~a~l~~~~~~-~---~~~~~~~~~~~l~~~ 347 (447)
+.++++++.+...... . ......+.++++...+.+..++++.+.+. + ..++.+++.+++++.
T Consensus 197 ~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~ 276 (361)
T TIGR01366 197 IMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSW 276 (361)
T ss_pred EECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHH
Confidence 7899887766521100 0 00001222333444444566778877654 2 346667777788888
Q ss_pred HhhccCCC-ceeeEe-eeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-----CCEEEEecCCCCCHH
Q 013204 348 VKAFSDSP-IIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPE 420 (447)
Q Consensus 348 L~~l~~~~-~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----g~~iR~~~~~~~t~e 420 (447)
++++.... ...... .......+.+.+.. ....+.+.|.++||.+.+. ++.+|+++...+|++
T Consensus 277 l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~-----------~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~ 345 (361)
T TIGR01366 277 AQERPYATPFVTDPGKRSQVVGTIDFVDDI-----------DAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPD 345 (361)
T ss_pred HHhCCCcccCCCChhhcccceEEEECCCcc-----------CHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHH
Confidence 87773221 211110 11122234443211 1445788888999998754 246999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 013204 421 EVDELISKYGKALKA 435 (447)
Q Consensus 421 ~i~~~~~~l~~~l~~ 435 (447)
||++++++|++++++
T Consensus 346 di~~l~~al~~~~~~ 360 (361)
T TIGR01366 346 DVEALTECVDWVVER 360 (361)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998765
No 286
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.59 E-value=1.5e-13 Score=133.18 Aligned_cols=234 Identities=12% Similarity=0.106 Sum_probs=142.6
Q ss_pred ChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh---hcccCCcc
Q 013204 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPA 152 (447)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~~ 152 (447)
++....|+++++++. +.+.+++++||++|+..++..+. ..+++||+.++.|++..... ....+..
T Consensus 49 nPt~~~lE~~lA~l~---g~~~~~~~~sG~~Ai~~al~all--------~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~- 116 (377)
T TIGR01324 49 TLTHFALQDAMCELE---GGAGCYLYPSGLAAVTNSILAFV--------KAGDHVLMVDSAYEPTRYFCDIVLKRMGVD- 116 (377)
T ss_pred CccHHHHHHHHHHHh---CCCcEEEECcHHHHHHHHHHHhc--------CCCCEEEEcCCCcHHHHHHHHHHHHhcCcE-
Confidence 455678999999885 34579999999999999998653 33578888899998764321 1111110
Q ss_pred ccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHH
Q 013204 153 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 232 (447)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~ 232 (447)
+..++.. . .+.+++.+. +++++|++|.+.+..|.+.+ +++|++
T Consensus 117 -----------v~~~d~~----------~--------~e~l~~~i~----~~tklV~lesp~Np~g~~~d----l~~I~~ 159 (377)
T TIGR01324 117 -----------ITYYDPL----------I--------GEDIATLIQ----PNTKVLFLEAPSSITFEIQD----IPAIAK 159 (377)
T ss_pred -----------EEEECCC----------C--------HHHHHHhcC----CCceEEEEECCCCCCCcHHH----HHHHHH
Confidence 0111100 0 145565553 35678888887777776655 999999
Q ss_pred HHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeee--cccCCCc-ccceeEEEeChhHHHHhhhccCCCCccCcCC
Q 013204 233 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSA-YMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 309 (447)
Q Consensus 233 l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~--sK~l~gg-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (447)
+|++||+++|+|++|+ .|....+ ....+|+++. +|.++|. ..-.|+++++++.++.+... ....
T Consensus 160 la~~~g~~livD~t~a-~g~~~~p-----l~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~-------~~~~ 226 (377)
T TIGR01324 160 AARNPGIVIMIDNTWA-AGLLFKP-----LEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREH-------SYLM 226 (377)
T ss_pred HHHHcCCEEEEECCCc-cccccCc-----cccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHH-------HHHh
Confidence 9999999999999997 3333222 2234688765 7999863 13467788888876665421 1112
Q ss_pred CCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhcc-----CCCcee----------eEeeeeeEEEEEeec
Q 013204 310 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD 373 (447)
Q Consensus 310 t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~~~~~g~~~~i~~~~ 373 (447)
....+|..+...+..++.+. -..++..++..++.+.|++.+ .+|... ...+.|.++.+.+..
T Consensus 227 G~~l~p~~a~~~~rgl~tl~--~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~ 303 (377)
T TIGR01324 227 GQMVDADDAYTTLRGLRTLG--VRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQR 303 (377)
T ss_pred CCCCCHHHHHHHHhhhhhHH--HHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECC
Confidence 23445665555555555332 124455555556666665431 112111 123567788888853
No 287
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.59 E-value=5.2e-12 Score=122.60 Aligned_cols=312 Identities=13% Similarity=0.071 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEE
Q 013204 52 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 131 (447)
Q Consensus 52 p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi 131 (447)
++..+++.+.+..+... +..+...++++.+++.+ +.+++++++||++|+..+++.+ +-.+++.||
T Consensus 11 ~~e~~a~~~~~~~~~~~-----~~g~~~~~~e~~la~~~---g~~~~v~~~sgt~aL~~~l~al-------~~~pGd~Vi 75 (376)
T TIGR02379 11 GQELEYIAEAISEGKLS-----GDGPFSRRCETWLENRT---GTKKALLTPSCTAALEMAALLL-------DIQPGDEVI 75 (376)
T ss_pred HHHHHHHHHHHHcCCcc-----CCcHHHHHHHHHHHHHh---CCCeEEEeCCHHHHHHHHHHHc-------CCCCcCEEE
Confidence 55677888877654221 13456788889988886 5568999999999999888764 113457899
Q ss_pred EEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEc
Q 013204 132 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAE 211 (447)
Q Consensus 132 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~e 211 (447)
+..+.|.+........+..+. .++.... .-+ .+++++++.+. + ++++|+
T Consensus 76 v~~~t~~~~~~~~~~~G~~~v-------------~vd~d~~------~~~------~d~~~le~~i~---~-~tk~Ii-- 124 (376)
T TIGR02379 76 MPSYTFVSTANAFVLRGAKIV-------------FVDIRPD------TMN------IDETLIESAIT---H-RTKAIV-- 124 (376)
T ss_pred ECCCCcHHHHHHHHHcCCEEE-------------EEecCCC------cCC------CCHHHHHHhcC---c-CceEEE--
Confidence 988888776544433222211 1221110 000 01366776664 2 455555
Q ss_pred cccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec----ccCCCcccceeEEEe
Q 013204 212 PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAILV 287 (447)
Q Consensus 212 pv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s----K~l~gg~~~~g~~~~ 287 (447)
|++. .|...+ +++|.++|++||+++|.|++|+ +|.. +.....+...|+.+|| |.++.| .+.|+++.
T Consensus 125 p~~~-~G~~~d----~~~I~~la~~~~i~vIeDaa~~-~g~~---~~~~~~g~~~~~~~fSf~~~K~l~~g-~~gG~v~~ 194 (376)
T TIGR02379 125 PVHY-AGVACD----MDTIMALANKHQLFVIEDAAQG-VMST---YKGRALGSIGHLGTFSFHETKNYTSG-GEGGALLI 194 (376)
T ss_pred EeCC-CCCccC----HHHHHHHHHHCCCEEEEECccc-cCCc---cCCcccCCCCCEEEEeCCCCCcCccc-CCceEEEE
Confidence 4444 344554 8999999999999999999997 4321 1111223335788888 888766 36677766
Q ss_pred C-hhHHHHhhhccCCCC---c-----------cCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhcc
Q 013204 288 S-PEVSEVIHSQSNTLG---S-----------FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS 352 (447)
Q Consensus 288 ~-~~~~~~~~~~~~~~~---~-----------~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~ 352 (447)
+ +++.+.+......-. . ...+..+-.+.+.++.+++.|+.++ +..++.+++.++..+.|+.+.
T Consensus 195 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~--~~~~~r~~~~~~y~~~L~~~~ 272 (376)
T TIGR02379 195 NDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQAD--RINQDRLATWQLYQDALKPLE 272 (376)
T ss_pred CCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHhccCC
Confidence 5 777776653211000 0 0012233344555555666666543 344555556666666665542
Q ss_pred C-----CCc-eeeE-eeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee--------------------
Q 013204 353 D-----SPI-IGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------------------- 405 (447)
Q Consensus 353 ~-----~~~-~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------------------- 405 (447)
. .+. .... +... ++.+.+.... ....+.+.|.++||.+...
T Consensus 273 ~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~-----------~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~ 340 (376)
T TIGR02379 273 EKGIIELPSIPNGCQHNAH-MFYIKLKDED-----------DRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGED 340 (376)
T ss_pred cCCeeeCCCCCCCCeeeeE-EEEEEECCcC-----------CHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCC
Confidence 1 111 1011 1111 2234443211 1456888999999986621
Q ss_pred -------CCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 406 -------GDNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 406 -------g~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
.+.+.+-.+...+++|++++++.|++++
T Consensus 341 p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 341 IYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred hHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 0235555556689999999999998764
No 288
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.59 E-value=1.4e-13 Score=133.48 Aligned_cols=234 Identities=17% Similarity=0.158 Sum_probs=137.9
Q ss_pred CCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccc
Q 013204 74 RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL 153 (447)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 153 (447)
.+.+...+|+++++++. +.+..++++||++|+..++.++ ..+++||+.++.|++.........
T Consensus 49 ~~~pt~~~le~~la~l~---g~~~~~~~~sG~~ai~~~~~ll---------~~Gd~Vl~~~~~y~~t~~~~~~~~----- 111 (366)
T PRK08247 49 TGNPTRGVLEQAIADLE---GGDQGFACSSGMAAIQLVMSLF---------RSGDELIVSSDLYGGTYRLFEEHW----- 111 (366)
T ss_pred CCCchHHHHHHHHHHHh---CCCcEEEEcCHHHHHHHHHHHh---------CCCCEEEEecCCcCcHHHHHHHHh-----
Confidence 35566888999999986 3345688999999998776433 234789999999987532111100
Q ss_pred cCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHH
Q 013204 154 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 233 (447)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l 233 (447)
..++. .+..++.. +++++++.+. + ++++|++|..++..+.. ..+++|.++
T Consensus 112 -~~~G~---~v~~vd~~------------------d~~~l~~~i~---~-~tklv~le~P~NP~~~~----~dl~~I~~l 161 (366)
T PRK08247 112 -KKWNV---RFVYVNTA------------------SLKAIEQAIT---P-NTKAIFIETPTNPLMQE----TDIAAIAKI 161 (366)
T ss_pred -hccCc---eEEEECCC------------------CHHHHHHhcc---c-CceEEEEECCCCCCCcH----HHHHHHHHH
Confidence 00010 01112211 1366776664 2 45666766555444433 449999999
Q ss_pred HHhcCCEEEEehhhcCCCccccccccccCCCCCCee--eecccCCCc-ccceeEEEeC-hhHHHHhhhccCCCCccCcCC
Q 013204 234 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSA-YMPIGAILVS-PEVSEVIHSQSNTLGSFSHGF 309 (447)
Q Consensus 234 ~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v--~~sK~l~gg-~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 309 (447)
|++||+++|+||+|.. +....+ .....|++ +++|.++|. ....|+++++ +++.+.+... ....
T Consensus 162 a~~~g~~lIvD~t~~~-~~~~~p-----~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~-------~~~~ 228 (366)
T PRK08247 162 AKKHGLLLIVDNTFYT-PVLQRP-----LEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYY-------QNAA 228 (366)
T ss_pred HHHcCCEEEEECCCcc-ccccCc-----hhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHH-------HHhc
Confidence 9999999999999841 111111 11235665 478998862 2356778876 5676666421 1112
Q ss_pred CCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceee--EeeeeeEEEEEee
Q 013204 310 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGE--IRGTGLILGTEFA 372 (447)
Q Consensus 310 t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~--~~~~g~~~~i~~~ 372 (447)
....+|..+..+...++.+. ...++.+++.+.+.+.|++. +.+.. .++.|.++.+.+.
T Consensus 229 g~~~s~~~a~l~~~~l~tl~--~r~~~~~~~a~~l~~~L~~~---p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 229 GAVLSPFDSWLLIRGMKTLA--LRMRQHEENAKAIAAFLNEQ---PGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred CCCCChHHHHHHHhccCcHH--HHHHHHHHHHHHHHHHHHhC---CCeeEEecCCcCcEEEEEEC
Confidence 33456666666666565332 23345566667777777654 33322 3446888877764
No 289
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.59 E-value=8e-13 Score=127.99 Aligned_cols=273 Identities=16% Similarity=0.123 Sum_probs=162.6
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhh---cccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~---~~~~~~ 151 (447)
+.+...+|+++++++. . +++++++||++|+..++.... ..+++||+.++.|++...... ...|..
T Consensus 49 ~~p~~~~Le~~lA~l~---~-~~~v~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~ 116 (366)
T PRK07582 49 SNPTWRALEAALGELE---G-AEALVFPSGMAAITAVLRALL--------RPGDTVVVPADGYYQVRALAREYLAPLGVT 116 (366)
T ss_pred CCccHHHHHHHHHHHc---C-CCEEEECCHHHHHHHHHHHhc--------CCCCEEEEeCCCcHhHHHHHHHHHhcCeEE
Confidence 5667888999999885 2 357778889999998887543 334789999999988754321 111111
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
+..++..+ +.+. +. +++.+|++|..++.+|.+.+ +++|.
T Consensus 117 ------------v~~v~~~~--------------------~~~~-~~----~~t~lV~le~p~NPtg~v~d----i~~I~ 155 (366)
T PRK07582 117 ------------VREAPTAG--------------------MAEA-AL----AGADLVLAETPSNPGLDVCD----LAALA 155 (366)
T ss_pred ------------EEEECCCC--------------------hHHH-hc----cCceEEEEECCCCCCCCccC----HHHHH
Confidence 11122110 0111 11 24567777777766776655 99999
Q ss_pred HHHHhcCCEEEEehhhc-CCCccccccccccCCCCCCeee--ecccCCC-cccceeEEEeC-hhHHHHhhhccCCCCccC
Q 013204 232 AVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILVS-PEVSEVIHSQSNTLGSFS 306 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~-g~g~~g~~~~~~~~~~~~d~v~--~sK~l~g-g~~~~g~~~~~-~~~~~~~~~~~~~~~~~~ 306 (447)
++|+++|+++++||+|. .++.. + ....+|+++ ++|.++| +..++|+++++ +++.+.+... .
T Consensus 156 ~~a~~~g~~lvVD~t~~~~~~~~--p-----~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~-------~ 221 (366)
T PRK07582 156 AAAHAAGALLVVDNTTATPLGQR--P-----LELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERW-------R 221 (366)
T ss_pred HHHHHcCCEEEEECCCCCccccC--c-----hhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHH-------H
Confidence 99999999999999984 22211 1 123357775 5799876 33678988874 6777766531 1
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCC-----Cceee----------EeeeeeEEEEEe
Q 013204 307 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-----PIIGE----------IRGTGLILGTEF 371 (447)
Q Consensus 307 ~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~-----~~~~~----------~~~~g~~~~i~~ 371 (447)
.......+|+.+..+...++.+ +-..++..++...+.+.|++.+.. |.... ..+.|.++.+.+
T Consensus 222 ~~~g~~~~~~~a~l~~r~l~tl--~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~ 299 (366)
T PRK07582 222 LLAGAIPGPFEAWLAHRSLGTL--GLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFEL 299 (366)
T ss_pred HHhCCCCCHHHHHHHHhccccH--HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEe
Confidence 1112344677666555555532 223466667777788777765322 21111 124688888888
Q ss_pred ecCCCCCCCCCCCcchHHHHHHHHHHcCceEEe--------------------eCCEEEEecCCCCCHHHHHHHHHHHH
Q 013204 372 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV--------------------SGDNIMMSPPFIMSPEEVDELISKYG 430 (447)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~--------------------~g~~iR~~~~~~~t~e~i~~~~~~l~ 430 (447)
.+. ....+.+.+.+++... ..+.||++..+-.+++.|+.+.++|+
T Consensus 300 ~~~--------------~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 300 ADA--------------AAAERFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred CCH--------------HHHHHHHHhCCcceecccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 521 1233444444444320 01469999777666666666655554
No 290
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.59 E-value=2.6e-13 Score=132.67 Aligned_cols=237 Identities=13% Similarity=0.115 Sum_probs=143.4
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
+.+...++++++++++ +.+....++||+.|+..++.... ..+++|++..+.|.+......... .
T Consensus 63 ~~p~~~~Le~~lA~l~---G~~~~~~~~sG~~Ai~~~l~~~l--------~~Gd~Vl~~~~~y~~~~~~~~~~~--~--- 126 (398)
T PRK07504 63 SNPTVDMFEKRMCALE---GAEDARATASGMAAVTAAILCQV--------KAGDHVVAARALFGSCRYVVETLL--P--- 126 (398)
T ss_pred CCchHHHHHHHHHHHh---CCCeeeEecCHHHHHHHHHHHHh--------CCCCEEEEcCCchhHHHHHHHHHH--h---
Confidence 4556788999999886 34456678899999988776443 234788888888877532211100 0
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
.++. .+..++.. +++++++.+. +++++|++|.+++..|.+.+ +++|.++|
T Consensus 127 -~~G~---~v~~vd~~------------------d~e~l~~ai~----~~tklV~lesp~NptG~v~d----l~~I~~la 176 (398)
T PRK07504 127 -RYGI---ESTLVDGL------------------DLDNWEKAVR----PNTKVFFLESPTNPTLEVID----IAAVAKIA 176 (398)
T ss_pred -hcCe---EEEEECCC------------------CHHHHHHhcC----cCceEEEEECCCCCCcEecC----HHHHHHHH
Confidence 0000 01111110 1366666654 34667888877777777766 99999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCccccee-EEEeChhHHH-HhhhccCCCCccCcCCC
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIG-AILVSPEVSE-VIHSQSNTLGSFSHGFT 310 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~g-~~~~~~~~~~-~~~~~~~~~~~~~~~~t 310 (447)
+++|+++|+||+|+.. ....+ .....|+++ ++|.++|.+.++| +++++++.+. .+... .....
T Consensus 177 ~~~gi~lvvD~a~a~~-~~~~~-----~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~-------~~~~g 243 (398)
T PRK07504 177 NQAGAKLVVDNVFATP-LFQKP-----LELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDY-------FRHTG 243 (398)
T ss_pred HHcCCEEEEECCcccc-ccCCc-----hhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHH-------HHHhC
Confidence 9999999999998722 21111 122367775 5799987547775 5666776554 23210 01112
Q ss_pred CCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-----CCcee----------eEeeeeeEEEEEee
Q 013204 311 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFA 372 (447)
Q Consensus 311 ~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~~~~~g~~~~i~~~ 372 (447)
...+|+.++.++..|+.+. ...++..++.+++.+.|++.+. +|... ..+|.|.++.+++.
T Consensus 244 ~~~s~~~A~~~l~~L~tl~--~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~ 318 (398)
T PRK07504 244 PSLSPFNAWTLLKGLETLP--VRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELK 318 (398)
T ss_pred CCCCHHHHHHHHhccchHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeC
Confidence 3457777777777777543 2345555677777777765421 22111 12355888888885
No 291
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.58 E-value=2.8e-13 Score=132.51 Aligned_cols=235 Identities=14% Similarity=0.118 Sum_probs=142.3
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh---hcccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~ 151 (447)
..+...++++.++++. +.+.+++++||+.|+..++.... ..+++||+....|.+..... +...|..
T Consensus 68 ~~p~~~~le~~lA~l~---g~~~al~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~ 136 (403)
T PRK07810 68 GNPTVSMFEERLRLIE---GAEACFATASGMSAVFTALGALL--------GAGDRLVAARSLFGSCFVVCNEILPRWGVE 136 (403)
T ss_pred CCchHHHHHHHHHHHh---CCCcEEEECChHHHHHHHHHHHh--------CCCCEEEEccCCcchHHHHHHHHHHHcCcE
Confidence 4556788999999986 34578999999999999887653 33467777665554432111 1111111
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
+..++.. +++++++.+. +++++|++|.+.+..|.+.+ +++|.
T Consensus 137 ------------v~~vd~~------------------d~~~l~~ai~----~~tklV~~esp~Nptg~v~d----l~~I~ 178 (403)
T PRK07810 137 ------------TVFVDGE------------------DLSQWEEALS----VPTQAVFFETPSNPMQSLVD----IAAVS 178 (403)
T ss_pred ------------EEEECCC------------------CHHHHHHhcC----cCceEEEEECCCCCCCeecC----HHHHH
Confidence 1111111 1366777664 24678888887777777766 99999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccce-eEEEeChhHHH-HhhhccCCCCccCc
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSPEVSE-VIHSQSNTLGSFSH 307 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~-g~~~~~~~~~~-~~~~~~~~~~~~~~ 307 (447)
++|+++|+++|+||++. .+....+ . ....|+++ ++|.++|.+..+ |+++++++.+. .+... ..
T Consensus 179 ~la~~~g~~vivD~a~a-~~~~~~~--~---~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~-------~~ 245 (403)
T PRK07810 179 ELAHAAGAKVVLDNVFA-TPLLQRG--L---PLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKL-------MR 245 (403)
T ss_pred HHHHHcCCEEEEECCCC-ccccCCh--h---hcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHH-------HH
Confidence 99999999999999986 2222111 1 12358776 469898733455 67777777544 23210 11
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCC-----Cceee----------EeeeeeEEEEEee
Q 013204 308 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-----PIIGE----------IRGTGLILGTEFA 372 (447)
Q Consensus 308 ~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~-----~~~~~----------~~~~g~~~~i~~~ 372 (447)
......+|..++.++..|+.+. ...++..++..++.+.|++.+.. |.... ..+.|.++.+.+.
T Consensus 246 ~~g~~~s~~~a~l~l~~L~tl~--~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~ 323 (403)
T PRK07810 246 HTGPALSAFNAWVLLKGLETLA--LRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELD 323 (403)
T ss_pred HhCCCCCHHHHHHHHhccCcHH--HHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 1123457777777777776442 23455566666666666654221 11111 1266888888886
Q ss_pred c
Q 013204 373 D 373 (447)
Q Consensus 373 ~ 373 (447)
.
T Consensus 324 ~ 324 (403)
T PRK07810 324 A 324 (403)
T ss_pred C
Confidence 4
No 292
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.58 E-value=5.9e-12 Score=122.76 Aligned_cols=314 Identities=14% Similarity=0.170 Sum_probs=175.9
Q ss_pred HHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEE
Q 013204 52 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 131 (447)
Q Consensus 52 p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi 131 (447)
++-.+++.+.+...... ..+...++++++++++ +.+.+++++||++|+..+++.+ +-..+++||
T Consensus 14 ~~e~~~~~~~l~~~~~~------~g~~~~~le~~la~~~---g~~~~v~~~sgt~al~lal~al-------~~~~Gd~Vi 77 (379)
T PRK11658 14 DEELAAVKEVLRSGWIT------TGPKNQALEQAFCQLT---GNQHAIAVSSATAGMHITLMAL-------GIGPGDEVI 77 (379)
T ss_pred HHHHHHHHHHHHcCCcc------CCHhHHHHHHHHHHHh---CCCeEEEECCHHHHHHHHHHHc-------CCCCCCEEE
Confidence 55677777777654321 2345788999999987 3457899999999999999865 113357899
Q ss_pred EEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEc
Q 013204 132 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAE 211 (447)
Q Consensus 132 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~e 211 (447)
+..+.|.+........+..+ ..++.... .. ..+++++++.+. + ++++|+
T Consensus 78 v~~~~~~~~~~~~~~~G~~~-------------v~vd~~~~------~~------~~d~~~l~~~i~---~-~tkav~-- 126 (379)
T PRK11658 78 TPSLTWVSTLNMIVLLGATP-------------VMVDVDRD------TL------MVTPEAIEAAIT---P-RTKAII-- 126 (379)
T ss_pred ECCCcHHHHHHHHHHcCCEE-------------EEEecCCC------cC------CcCHHHHHHhcc---c-CCeEEE--
Confidence 98888877654333222111 11221100 00 001366777664 2 345555
Q ss_pred cccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc-CCCccccccccccCCCCCCeeeec--ccCCCcccceeEEEe-
Q 013204 212 PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILV- 287 (447)
Q Consensus 212 pv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~-g~g~~g~~~~~~~~~~~~d~v~~s--K~l~gg~~~~g~~~~- 287 (447)
|++. .|...+ +++|.++|++||+++|.|++|+ |....|.. ...++. ++.+|+ |.+++| ..|+++.
T Consensus 127 ~~~~-~G~~~d----~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~--~g~~g~--~~~Sf~~~K~l~~g--~GG~v~~~ 195 (379)
T PRK11658 127 PVHY-AGAPAD----LDAIRAIGERYGIPVIEDAAHAVGTYYKGRH--IGARGT--AIFSFHAIKNITCA--EGGLVVTD 195 (379)
T ss_pred EeCC-CCCcCC----HHHHHHHHHHcCCeEEEECCCccCCeECCee--cCCCCC--EEEeCCCCCcCccc--CceEEEEC
Confidence 3433 455544 8999999999999999999997 32222211 112232 566665 677764 5566666
Q ss_pred ChhHHHHhhhccCC---CCc--------------cCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhh
Q 013204 288 SPEVSEVIHSQSNT---LGS--------------FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 350 (447)
Q Consensus 288 ~~~~~~~~~~~~~~---~~~--------------~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~ 350 (447)
++++.+.++..... ... +..+..+..+.+.++.++..++.+ ++..++.+++.+++++.|++
T Consensus 196 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l--~~~~~~r~~~a~~~~~~L~~ 273 (379)
T PRK11658 196 DDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKL--EALNARRREIAARYLQALAD 273 (379)
T ss_pred CHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcC
Confidence 46776665432100 000 001112223334444444444332 44567777777788888876
Q ss_pred ccCCCceeeE-eeee--eEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee----------------------
Q 013204 351 FSDSPIIGEI-RGTG--LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------------------- 405 (447)
Q Consensus 351 l~~~~~~~~~-~~~g--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---------------------- 405 (447)
+....+.... .... .++.+.+....... ....+.+.|.++||-+...
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~ 345 (379)
T PRK11658 274 LPFQPLSLPAWPHQHAWHLFIIRVDEERCGI--------SRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNT 345 (379)
T ss_pred CCCccCcCCCCCCceeEEEEEEEECCccccC--------CHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHH
Confidence 5211111100 0111 12233332211000 1456888899999875510
Q ss_pred ----CCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 406 ----GDNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 406 ----g~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
...+.+-.+...|+++++++++.|++++
T Consensus 346 ~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 346 EWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred HHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 0335555556689999999999998865
No 293
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.58 E-value=3.9e-13 Score=131.50 Aligned_cols=235 Identities=15% Similarity=0.158 Sum_probs=141.0
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh--h-cccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA--A-SLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~--~-~~~~~~ 151 (447)
..+...+|+++++++.. .+..++++||++|+..++.... ..+++|++..+.|++..... . ...+..
T Consensus 58 ~~p~~~~Le~~lA~l~g---~~~~v~~~sG~~Ai~~~l~all--------~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~ 126 (405)
T PRK08776 58 GNPTRDLLGEALAELEG---GAGGVITATGMGAINLVLNALL--------QPGDTLVVPHDAYGGSWRLFNALAKKGHFA 126 (405)
T ss_pred CChHHHHHHHHHHHHhC---CCceEEEcCHHHHHHHHHHHHh--------CCCCEEEEccCCchHHHHHHHHHHHhcCcE
Confidence 45566789999998853 2356778889999988887653 33477888899998743211 1 111110
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
+..++.. +.+++++.+. + ++++|+++..++..|.+.. +++|.
T Consensus 127 ------------v~~v~~~------------------d~~~l~~~i~---~-~tklV~l~~P~NPtG~v~d----l~~I~ 168 (405)
T PRK08776 127 ------------LITADLT------------------DPRSLADALA---Q-SPKLVLIETPSNPLLRITD----LRFVI 168 (405)
T ss_pred ------------EEEECCC------------------CHHHHHHhcC---c-CCeEEEEECCCCCCCccCC----HHHHH
Confidence 1111111 1266666664 2 4556666666555666644 99999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeee--cccCCCc-ccceeEEEe-ChhHHHHhhhccCCCCccCc
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSA-YMPIGAILV-SPEVSEVIHSQSNTLGSFSH 307 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~--sK~l~gg-~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 307 (447)
++|++||+++|+||+|..... -.+. ....|++++ +|.++|. ....|+++. ++++.+.+... ..
T Consensus 169 ~la~~~gi~vIvD~a~a~~~~-~~pl-----~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~-------~~ 235 (405)
T PRK08776 169 EAAHKVGALTVVDNTFLSPAL-QKPL-----EFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWW-------AN 235 (405)
T ss_pred HHHHHcCCEEEEECCCccccc-CCcc-----cccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHH-------HH
Confidence 999999999999999863211 1111 123577765 5988763 234677666 56676666421 11
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-----CCcee----------eEeeeeeEEEEEee
Q 013204 308 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFA 372 (447)
Q Consensus 308 ~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~~~~~g~~~~i~~~ 372 (447)
...+..+|+.+..+...++.+ +...++..++...+.+.|++.+. +|... ...|.|.++.+++.
T Consensus 236 ~~g~~~s~~~a~l~~~gl~tl--~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 313 (405)
T PRK08776 236 ALGLTGSPFDAFLTLRGLRTL--DARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELE 313 (405)
T ss_pred hcCCCCCHHHHHHHHhhhCcH--HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEc
Confidence 112346788887777666644 23456666677777777765421 12111 12467888888885
Q ss_pred c
Q 013204 373 D 373 (447)
Q Consensus 373 ~ 373 (447)
.
T Consensus 314 ~ 314 (405)
T PRK08776 314 G 314 (405)
T ss_pred C
Confidence 3
No 294
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.58 E-value=2e-12 Score=115.04 Aligned_cols=289 Identities=13% Similarity=0.106 Sum_probs=170.2
Q ss_pred CCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcc
Q 013204 94 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 173 (447)
Q Consensus 94 ~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
...-.++..||+.+.|.|+-... .+.++|+++..+--|.....+... .++.+ +.+.. .+
T Consensus 67 n~~tf~isgsGh~g~E~al~N~l--------ePgd~vLv~~~G~wg~ra~D~~~r------~ga~V-----~~v~~--~~ 125 (385)
T KOG2862|consen 67 NAQTFVISGSGHSGWEAALVNLL--------EPGDNVLVVSTGTWGQRAADCARR------YGAEV-----DVVEA--DI 125 (385)
T ss_pred CCceEEEecCCcchHHHHHHhhc--------CCCCeEEEEEechHHHHHHHHHHh------hCcee-----eEEec--Cc
Confidence 34467788899999999988553 234667776554444432222211 11110 01110 00
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcc
Q 013204 174 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 253 (447)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~ 253 (447)
+. ...++++++.+..+ ++.+|.+....+++|...+ .++...++|++|++++++|.|-+ +|
T Consensus 126 -----G~------~~~le~i~~~lsqh---~p~~vfv~hgdsSTgV~q~---~~~~~g~lc~k~~~lllVD~VaS-lg-- 185 (385)
T KOG2862|consen 126 -----GQ------AVPLEEITEKLSQH---KPKAVFVTHGDSSTGVLQD---LLAISGELCHKHEALLLVDTVAS-LG-- 185 (385)
T ss_pred -----cc------CccHHHHHHHHHhc---CCceEEEEecCccccccch---HHHHHHHHhhcCCeEEEEechhh-cC--
Confidence 00 11147788888764 3467777777777777654 37778899999999999999987 54
Q ss_pred ccccccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCccCc----CCCC-----------CCcHH-H
Q 013204 254 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSH----GFTY-----------SGHPV-S 317 (447)
Q Consensus 254 g~~~~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~t~-----------~~~~~-~ 317 (447)
|..|.++.+|+..-+..-.|+++++ .+++.+..++..++.++.+..++..+.. ..+| ...|+ .
T Consensus 186 gt~F~mDewgVDvaytgSQKaL~aP-~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~l 264 (385)
T KOG2862|consen 186 GTEFEMDEWGVDVAYTGSQKALGAP-AGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQL 264 (385)
T ss_pred CccceehhhcccEEEecchhhcCCC-CCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHH
Confidence 4477778877643333456999987 6888889999998888765432221110 0011 11233 3
Q ss_pred HHHHHHHHHHHhhhc---HHHHHHHHHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHH
Q 013204 318 CAVAIEALKIYKERN---IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGA 393 (447)
Q Consensus 318 ~~aa~a~l~~~~~~~---~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 393 (447)
.-+..++|+.+-+++ ..++-++++++++..|+++ -+.-...+....-....+..+... ...++..
T Consensus 265 ly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gv-----------Dw~dVv~ 333 (385)
T KOG2862|consen 265 LYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGV-----------DWKDVVA 333 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCC-----------CHHHHHH
Confidence 334446676665544 4566677888898888886 111111111111222222222111 1345777
Q ss_pred HHHHcCceEEee------CCEEEEecCC-CCCHHHHHHHHHHHHHHHHH
Q 013204 394 QCEKHGMLVRVS------GDNIMMSPPF-IMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 394 ~l~~~Gi~~~~~------g~~iR~~~~~-~~t~e~i~~~~~~l~~~l~~ 435 (447)
++.+++.+...+ |..+||...- +.+-|.|+..++.|+.++.+
T Consensus 334 ~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 334 YAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred HHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 877775443332 3679998542 34788899999888888765
No 295
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.57 E-value=8.5e-13 Score=127.35 Aligned_cols=320 Identities=12% Similarity=0.034 Sum_probs=185.3
Q ss_pred CCHHHHHHHHHHHhcC----CcccccCcCCC---hHHHHHHHHHHHhcCcCCCCeEEEe-CChhhHHHHHHHHHHHHHHh
Q 013204 50 SEPRLVAAATAQLNTL----PFYHSFWNRTT---KPSLDLAKELLEMFTASKMAKVFFT-NSGSEANDTQVKLVWYYNNA 121 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~----~~~~~~~~~~~---~~~~~l~~~l~~~~~~~~~~~v~~~-~sGseA~~~Al~~~~~~~~~ 121 (447)
-+++|++|+.+.+.+. ...+....... +...+..+.+++++......+++|+ .||+.|+|+++....
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~----- 88 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLL----- 88 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcC-----
Confidence 5799999999887432 01111111122 4566777888888742122345555 799999999988653
Q ss_pred cCCCCcceEEEEcCCCccchhhhhccc-CCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHH-HHHh
Q 013204 122 LGRPNKKKFIARQKSYHGSTLIAASLS-GLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED-LILK 199 (447)
Q Consensus 122 ~~~~~~~~vi~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~-~l~~ 199 (447)
...++++++..+..|.....+... |... .+..+..+. .+ . ..++++ .+.
T Consensus 89 ---~~g~~~l~i~~G~fg~r~~~~a~~~g~~~-------------~~~~~~~~g--~~-~---------~~~~~~~~l~- 139 (360)
T PRK05355 89 ---GGGKKADYVDTGSWSKKAIKEAKKYGEVN-------------VAASSEDDG--FT-Y---------IPPLDEWQLS- 139 (360)
T ss_pred ---CCCCeEEEEECCHHHHHHHHHHHHhCCce-------------EEecccccC--CC-C---------CCChhhccCC-
Confidence 223566766666666644332211 1110 011100000 00 0 012222 332
Q ss_pred hCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCCC
Q 013204 200 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSS 277 (447)
Q Consensus 200 ~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~g 277 (447)
+ ++.+|.+..+-.++|...++ +++| ||+++++|-+++ +|.. +...+.+ |++++| |.++
T Consensus 140 --~-~~~~V~~th~eTstGv~~~~---i~~i------~g~l~vVDavss-~g~~--~idv~~~----d~~~~ssqK~lg- 199 (360)
T PRK05355 140 --D-DAAYVHYTSNETIDGTEFHE---LPDT------GDVPLVADMSSD-ILSR--PIDVSKF----GLIYAGAQKNIG- 199 (360)
T ss_pred --C-CCCEEEEccCCCcceEecCc---cccc------CCCcEEEEcCcc-ccCc--cCCHHHc----cEEEEecccccc-
Confidence 2 35567777776777777532 4444 899999999998 4322 2222322 577765 8884
Q ss_pred cccceeEEEeChhHHHHhhhccCCC---C--ccCcCCCCCCcHHHHHHHHHHHHHHhhh-c---HHHHHHHHHHHHHHhH
Q 013204 278 AYMPIGAILVSPEVSEVIHSQSNTL---G--SFSHGFTYSGHPVSCAVAIEALKIYKER-N---IVEQVNKIAPKFQDGV 348 (447)
Q Consensus 278 g~~~~g~~~~~~~~~~~~~~~~~~~---~--~~~~~~t~~~~~~~~~aa~a~l~~~~~~-~---~~~~~~~~~~~l~~~L 348 (447)
+ .++|+++.++++.+.+....... . .......++++...+.+..++|+.+.+. + ..++.+++.+++++.|
T Consensus 200 P-~Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l 278 (360)
T PRK05355 200 P-AGLTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAI 278 (360)
T ss_pred C-CceEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 5 67999999999887765310000 0 0001112345566677777888887765 3 4567777778888888
Q ss_pred hhccCCCceee-EeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC---CEEEEecCCCCCHHHHHH
Q 013204 349 KAFSDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVDE 424 (447)
Q Consensus 349 ~~l~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g---~~iR~~~~~~~t~e~i~~ 424 (447)
+++.-+..... -...+..+.+.++... ....+...+.++|+++.... +.+|+++...+|.+||++
T Consensus 279 ~~~~~~~~~~~~~~rs~~v~sf~~~~~~-----------~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~ 347 (360)
T PRK05355 279 DSSDFYRNPVAPEDRSRMNVPFTLADEE-----------LDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQA 347 (360)
T ss_pred HhCCCcccCCChhhcCCcEEEEEcCChH-----------HHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHH
Confidence 87731111111 1112234445443320 22456678889999985442 569999999999999999
Q ss_pred HHHHHHHHHHH
Q 013204 425 LISKYGKALKA 435 (447)
Q Consensus 425 ~~~~l~~~l~~ 435 (447)
+++.|++.+..
T Consensus 348 l~~~l~~~~~~ 358 (360)
T PRK05355 348 LVDFMKEFERR 358 (360)
T ss_pred HHHHHHHHHHh
Confidence 99999997653
No 296
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.57 E-value=4.5e-13 Score=130.22 Aligned_cols=238 Identities=16% Similarity=0.178 Sum_probs=144.5
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
+.+...++++.++++.. .+.+++++||++|+..++.... .++++|++..+.|.+...............
T Consensus 49 ~~p~~~~le~~lA~l~g---~~~v~~~~gg~~Ai~~~l~all--------~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~ 117 (382)
T TIGR02080 49 GNPTRDLLQQALAELEG---GAGAVVTNTGMSAIHLVTTALL--------GPDDLLVAPHDCYGGTYRLLNALAKKGCFR 117 (382)
T ss_pred CCchHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHHHHc--------CCCCEEEEcCCCcHHHHHHHHHHHhhcCeE
Confidence 55667889999998863 4679999999999999998663 345789999999976532211111100000
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
+..++.. +.+++++.+. +++++|+++..++..|.+.+ +++|.++|
T Consensus 118 ---------v~~~d~~------------------d~~~l~~ai~----~~tklV~l~~p~NPtG~~~d----l~~I~~la 162 (382)
T TIGR02080 118 ---------VLFVDQG------------------DEQALRAALA----QKPKLVLIETPSNPLLRVVD----IAKICHLA 162 (382)
T ss_pred ---------EEEECCC------------------CHHHHHHhcC----cCceEEEEECCCCCCCEecC----HHHHHHHH
Confidence 0001100 1366666664 24567777776666666665 89999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCC-cccceeEEEe-ChhHHHHhhhccCCCCccCcCCC
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFT 310 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~g-g~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~t 310 (447)
+++|+++|+||+|..+ ....+ .....|+++ ++|.++| +.+..|+++. ++++.+.+... .....
T Consensus 163 ~~~g~~vvvD~a~~~~-~~~~p-----l~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~-------~~~~g 229 (382)
T TIGR02080 163 KAVGAVVVVDNTFLSP-ALQNP-----LALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWW-------ANNLG 229 (382)
T ss_pred HHcCCEEEEECCCccc-ccCCc-----hhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHH-------HHccC
Confidence 9999999999998632 11111 112357764 6798875 3346777766 56777666421 12224
Q ss_pred CCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhcc-----CCCcee----------eEeeeeeEEEEEeec
Q 013204 311 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD 373 (447)
Q Consensus 311 ~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~~~~~g~~~~i~~~~ 373 (447)
...+|+.+..++..++-+.. ..++..++...+.+.|++.+ .+|... ...|.|.++.+++..
T Consensus 230 ~~~sp~~a~l~lr~l~tl~~--R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 305 (382)
T TIGR02080 230 VTGGAFDSYLTLRGLRTLVA--RMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKG 305 (382)
T ss_pred CCCCHHHHHHHHcccchHHH--HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecC
Confidence 45678777766666654432 24455566666666666431 112111 123668888888863
No 297
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.57 E-value=3.7e-13 Score=132.31 Aligned_cols=162 Identities=18% Similarity=0.206 Sum_probs=107.2
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
..+...+|+++++++. +.+.+++++||++|+..++..+. ...++|++..+.|++........ .+
T Consensus 56 ~~pt~~~Le~~lA~l~---g~~~~l~~ssG~~Ai~~al~al~--------~~Gd~Vl~~~~~Y~~t~~~~~~~--l~--- 119 (425)
T PRK06084 56 MNPTNDVLEQRVAALE---GGVGALAVASGMAAITYAIQTIA--------EAGDNIVSVAKLYGGTYNLLAHT--LP--- 119 (425)
T ss_pred CCchHHHHHHHHHHHh---CCCceeEehhHHHHHHHHHHHHh--------CCCCEEEEeCCCcchHHHHHHHh--cc---
Confidence 4455678999999886 33467889999999999998664 23478999999998754322110 00
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
.++. .+..++.. +++++++.+. +++++|++|++++..|.+.+ +++|.++|
T Consensus 120 -~~gi---~v~~~d~~------------------d~e~le~ai~----~~tklV~lesp~NPtG~v~d----l~~I~~la 169 (425)
T PRK06084 120 -RIGI---ETRFAAHD------------------DIAALEALID----ERTKAVFCESIGNPAGNIID----IQALADAA 169 (425)
T ss_pred -ccee---EEEEECCC------------------CHHHHHHHhc----cCCcEEEEeCCCCCCCeecC----HHHHHHHH
Confidence 0010 01111111 1367777765 24567888887777777766 89999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccceeEEEeC
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILVS 288 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~g~~~~~ 288 (447)
++||+++|+|++++ .+... ......+|+++ ++|.++|.+..+|.++..
T Consensus 170 ~~~~i~vVvD~a~a-~~~~~-----~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 170 HRHGVPLIVDNTVA-TPVLC-----RPFEHGADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred HHcCCEEEEECCCc-ccccC-----ChhhcCCCEEEECchhcccccccceeEEEEe
Confidence 99999999999986 32221 11233478774 579998855677776653
No 298
>PRK05968 hypothetical protein; Provisional
Probab=99.57 E-value=6.2e-13 Score=129.77 Aligned_cols=234 Identities=14% Similarity=0.070 Sum_probs=138.0
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhh---hhcccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI---AASLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~---~~~~~~~~ 151 (447)
..+...+++++++++. +.+..++++||+.|+..++.... ..+++||+..+.|++.... .+...|..
T Consensus 61 ~~p~~~~le~~lA~l~---g~~~av~~~sG~~Ai~~al~al~--------~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~ 129 (389)
T PRK05968 61 DNPTVRAFEEMLAKLE---GAEDARGFASGMAAISSTVLSFV--------EPGDRIVAVRHVYPDAFRLFETILKRMGVE 129 (389)
T ss_pred CChhHHHHHHHHHHHh---CCCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEeCCCchHHHHHHHHHHHHcCce
Confidence 4455778999999886 33456777999999998887543 3347888888888775311 11111111
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
+..++.. +.+++++.+. ++.+|++|...+..+. ...+++|.
T Consensus 130 ------------v~~vd~~------------------d~~~l~~~i~-----~tklV~ie~pt~~~~~----~~dl~~i~ 170 (389)
T PRK05968 130 ------------VDYVDGR------------------DEEAVAKALP-----GAKLLYLESPTSWVFE----LQDVAALA 170 (389)
T ss_pred ------------EEEeCCC------------------CHHHHHHhcc-----cCCEEEEECCCCCCCc----HHHHHHHH
Confidence 1111111 1256666542 3456777765444433 34599999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCc-ccceeEEEeChhHHHHhhhccCCCCccCcC
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSA-YMPIGAILVSPEVSEVIHSQSNTLGSFSHG 308 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (447)
++|++||+++|+|+++... ....+. . +| .|+++ ++|.++|+ ....|++++++++++.+..... .. .+
T Consensus 171 ~la~~~gi~vivD~a~a~~-~~~~p~--~-~g--~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~---~~-~g 240 (389)
T PRK05968 171 ALAKRHGVVTMIDNSWASP-VFQRPI--T-LG--VDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAY---PY-LG 240 (389)
T ss_pred HHHHHcCCEEEEECCCcch-hccCch--h-cC--CcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHH---Hh-CC
Confidence 9999999999999998632 211111 1 23 47665 56999873 2346788888888777653110 00 11
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceee----------EeeeeeEEEEEee
Q 013204 309 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGE----------IRGTGLILGTEFA 372 (447)
Q Consensus 309 ~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~----------~~~~g~~~~i~~~ 372 (447)
...+++.++.++..|+.+ +...++..++.+++.+.|++.+....+.. ..+.|.++.+++.
T Consensus 241 --~~~~~~~A~~~l~~L~tl--~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~ 310 (389)
T PRK05968 241 --AKLSPFEAWLLLRGLRTL--PLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFR 310 (389)
T ss_pred --CCCChHHHHHHHcccCcH--HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEEC
Confidence 234566666666666544 23345555567777777776532211110 1255677788875
No 299
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.56 E-value=7.5e-13 Score=129.72 Aligned_cols=215 Identities=13% Similarity=0.095 Sum_probs=131.9
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh---hcccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~ 151 (447)
..+...++++.++++.. .+..+.++||+.|+..+++... ..+++||+..+.|.+..... +...|.
T Consensus 63 ~~p~~~~le~~lA~l~g---~~~~i~~~sG~~Al~~~l~~ll--------~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~- 130 (403)
T PRK07503 63 SNPTLALLEQRMASLEG---GEAAVALASGMGAITATLWTLL--------RPGDEVIVDQTLYGCTFAFLHHGLGEFGV- 130 (403)
T ss_pred CCchHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHHHHc--------CCCCEEEEccCccchHHHHHHHHHhhCCE-
Confidence 45567889999998863 3456788899999999987543 33467888777764332111 111111
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
.+..++..+ ++++++.+. + ++++|++|..++..|.+.+ +++|.
T Consensus 131 -----------~v~~vd~~d------------------~~~l~~~i~---~-~tklV~le~p~NPtG~~~d----i~~I~ 173 (403)
T PRK07503 131 -----------TVRHVDLTD------------------PAALKAAIS---D-KTRMVYFETPANPNMRLVD----IAAVA 173 (403)
T ss_pred -----------EEEEeCCCC------------------HHHHHHhcC---c-cCcEEEEeCCCCCCCeeeC----HHHHH
Confidence 011122111 366776664 2 4567777776666676665 99999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCC-cccceeEEEeChhHHHHhhhccCCCCccCcC
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILVSPEVSEVIHSQSNTLGSFSHG 308 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~g-g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (447)
++|++||+++|+|++|... ..+.+ .+...|+++ ++|.+++ |....|+++.++++++.++... ....
T Consensus 174 ~la~~~gi~lIvD~a~a~~-~~~~~-----l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~-----~~~~ 242 (403)
T PRK07503 174 EIAHGAGAKVVVDNTYCTP-YLQRP-----LELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEG-----LKDM 242 (403)
T ss_pred HHHHHcCCEEEEECCCccc-ccCCc-----hhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhh-----HHhC
Confidence 9999999999999999732 22222 123467765 5799987 3356788888888877775210 0111
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhc
Q 013204 309 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF 351 (447)
Q Consensus 309 ~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l 351 (447)
.....+++.++.++..|+.+. ...++..++...+.+.|++.
T Consensus 243 ~g~~~s~~~a~l~l~~L~tl~--~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 243 TGAVMSPFDAFLLMRGLKTLA--LRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred cCCCCCHHHHHHHHcCcchHH--HHHHHHHHHHHHHHHHHHhC
Confidence 234557777776666665442 22344445566666666543
No 300
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.56 E-value=8.8e-13 Score=128.28 Aligned_cols=238 Identities=16% Similarity=0.172 Sum_probs=141.8
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
+.+...+|+++++++.. .+.+++++||++|+..++.... ..+++|++.++.|++...............
T Consensus 50 ~~pt~~~L~~~lA~l~g---~~~~i~~~sg~~Ai~~~l~~l~--------~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~ 118 (386)
T PRK08045 50 GNPTRDVVQRALAELEG---GAGAVLTNTGMSAIHLVTTVFL--------KPGDLLVAPHDCYGGSYRLFDSLAKRGCYR 118 (386)
T ss_pred CCccHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHHc--------CCCCEEEEcCCCcHHHHHHHHHHHhhCCeE
Confidence 55667889999999863 3479999999999999988553 345789999999986432211111000000
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
+..++.. +.+++++.+. +++++|+++..++..|.+.+ +++|.++|
T Consensus 119 ---------v~~vd~~------------------d~e~l~~~l~----~~tklV~l~sP~NPtG~v~d----i~~I~~ia 163 (386)
T PRK08045 119 ---------VLFVDQG------------------DEQALRAALA----EKPKLVLVESPSNPLLRVVD----IAKICHLA 163 (386)
T ss_pred ---------EEEeCCC------------------CHHHHHHhcc----cCCeEEEEECCCCCCCEecC----HHHHHHHH
Confidence 0001100 0256666654 24567777777766776665 89999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCc-ccceeEEEe-ChhHHHHhhhccCCCCccCcCCC
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSA-YMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFT 310 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg-~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~t 310 (447)
+++|+++|+||+|... ....+ .....|+++ ++|.++|. ....|+++. ++++.+.+... .....
T Consensus 164 ~~~g~~vivDeay~~~-~~~~p-----l~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~-------~~~~g 230 (386)
T PRK08045 164 REAGAVSVVDNTFLSP-ALQNP-----LALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWW-------ANNIG 230 (386)
T ss_pred HHcCCEEEEECCCCcc-ccCCc-----hhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHH-------HHhcC
Confidence 9999999999998633 11111 222357764 67988762 134677766 56676665421 11123
Q ss_pred CCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-----CCcee----------eEeeeeeEEEEEeec
Q 013204 311 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFAD 373 (447)
Q Consensus 311 ~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~~~~~g~~~~i~~~~ 373 (447)
...+|+.+..++..|+-+. -..++..++...+.+.|++-+. +|... ...|.|.++.+++..
T Consensus 231 ~~~~p~~~~l~~rgl~tl~--~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~ 306 (386)
T PRK08045 231 VTGGAFDSYLLLRGLRTLV--PRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG 306 (386)
T ss_pred CCCCHHHHHHHHhhhccHH--HHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecC
Confidence 4467777776666665332 1234555555566666654311 11111 123668888888853
No 301
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.55 E-value=5.5e-13 Score=129.33 Aligned_cols=237 Identities=16% Similarity=0.140 Sum_probs=137.7
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
..+...+|+++++++. +.+.+++++||++|+..++.... ..+++|++.++.|.+.......... .
T Consensus 51 ~npt~~~Le~~lA~le---g~e~ivvt~gg~~Ai~~~l~all--------~~Gd~Il~~~~~y~~~~~~~~~~~~----~ 115 (388)
T PRK08861 51 GNPNRGLLEQTLSELE---SGKGAVVTNCGTSALNLWVSALL--------GPDDLIVAPHDCYGGTYRLFNTRAN----K 115 (388)
T ss_pred CCchHHHHHHHHHHHh---CCCeEEEECCHHHHHHHHHHHHc--------CCCCEEEEcCCchHHHHHHHHHHHh----c
Confidence 4556788999999886 45799999999999999998653 3357788888888664321111000 0
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
.+. .+..++.. +++++++.+. +++.+|++|.+++..|.+.+ +++|.++|
T Consensus 116 --~gi---~v~~vd~~------------------d~e~l~~~i~----~~tklV~lesP~NPtG~v~d----l~~I~~la 164 (388)
T PRK08861 116 --GDF---KVQFVDQS------------------DAAALDAALA----KKPKLILLETPSNPLVRVVD----IAELCQKA 164 (388)
T ss_pred --CCe---EEEEECCC------------------CHHHHHHhcC----cCCeEEEEECCCCCCCcccC----HHHHHHHH
Confidence 000 00111110 1366666554 24567777776666776766 89999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCeeee--cccCCCc-ccceeEEEeC-hhHHHHhhhccCCCCccCcCCC
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSA-YMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFT 310 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~--sK~l~gg-~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~t 310 (447)
+++|+++|+||+|... ....+ .....|+++. +|.++|. ....|+++++ +++.+.+... .....
T Consensus 165 ~~~gi~vIvDea~~~~-~~~~p-----l~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~-------~~~~G 231 (388)
T PRK08861 165 KAVGALVAVDNTFLTP-VLQKP-----LELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWW-------GNCIG 231 (388)
T ss_pred HHcCCEEEEECCcccc-ccCCC-----cccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHH-------HhccC
Confidence 9999999999998621 11111 2234688765 5988873 1335666664 5566655421 11112
Q ss_pred CCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhcc-----CCCcee----------eEeeeeeEEEEEee
Q 013204 311 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFA 372 (447)
Q Consensus 311 ~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~~~~~g~~~~i~~~ 372 (447)
...+|..+...+..|+-+. -..++..+++..+.+.|++-+ .+|... ...+.|.++.+++.
T Consensus 232 ~~~~p~~a~l~~rgl~Tl~--lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~ 306 (388)
T PRK08861 232 ATGTPFDSYMTLRGIRTLG--ARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFA 306 (388)
T ss_pred CCCChHHHHHHHhcCCCHH--HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeC
Confidence 3445666655444443221 112444445555555555431 112111 12467888888886
No 302
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.55 E-value=3.8e-13 Score=130.84 Aligned_cols=234 Identities=13% Similarity=0.093 Sum_probs=142.1
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcc--cCCcc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL--SGLPA 152 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~--~~~~~ 152 (447)
..+...++++++++++ +.+.+++++||+.|+..++.... ..++.|++..+.|++........ .+...
T Consensus 51 ~np~~~~lE~~lA~l~---g~~~~l~~~sG~~Ai~~~l~~ll--------~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v 119 (385)
T PRK08574 51 ENPTLRPLEEALAKLE---GGVDALAFNSGMAAISTLFFSLL--------KAGDRVVLPMEAYGTTLRLLKSLEKFGVKV 119 (385)
T ss_pred CCccHHHHHHHHHHHh---CCCcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchhHHHHHHHhhccCcEE
Confidence 4456778999999997 34578888999999999988653 33578888888887754322111 11100
Q ss_pred ccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHH
Q 013204 153 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 232 (447)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~ 232 (447)
..++. +.+++++.+. +.++++|++|.+++..|.+.+ +++|.+
T Consensus 120 ------------~~~~~-------------------d~~~l~~~i~---~~~tklV~ie~p~NPtG~v~d----l~~I~~ 161 (385)
T PRK08574 120 ------------VLAYP-------------------STEDIIEAIK---EGRTKLVFIETMTNPTLKVID----VPEVAK 161 (385)
T ss_pred ------------EEECC-------------------CHHHHHHhcC---ccCceEEEEECCCCCCCEecC----HHHHHH
Confidence 00000 0266776664 225678888888777777776 899999
Q ss_pred HHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccc-eeEEE-eChhHHHHhhhccCCCCccCcC
Q 013204 233 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMP-IGAIL-VSPEVSEVIHSQSNTLGSFSHG 308 (447)
Q Consensus 233 l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~ 308 (447)
+|++||+++|+|++++ .+....+. .+| .|+++ ++|.++|.+-. .|+++ .++++.+.++... ..
T Consensus 162 la~~~gi~livD~t~a-~~~~~~~l---~~G--aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~-------~~ 228 (385)
T PRK08574 162 AAKELGAILVVDNTFA-TPLLYRPL---RHG--ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWR-------RR 228 (385)
T ss_pred HHHHcCCEEEEECCCC-ccccCChh---hhC--CcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHH-------Hh
Confidence 9999999999999985 22211111 123 57765 57999863223 35344 4677777665221 11
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-----CCceee----------E--eeeeeEEEEEe
Q 013204 309 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIGE----------I--RGTGLILGTEF 371 (447)
Q Consensus 309 ~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~~----------~--~~~g~~~~i~~ 371 (447)
.....+|+.++.++..++.+. ...++..++..++.+.|++.+. +|...+ . .+.|.++.+++
T Consensus 229 ~g~~~~p~~a~l~l~~l~tL~--~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l 306 (385)
T PRK08574 229 LGTIMQPFEAYLVLRGLKTLE--VRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRV 306 (385)
T ss_pred cCCCCCHHHHHHHHcccCcHH--HHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEe
Confidence 233455776666666665443 2345555566666666664421 221110 1 25788888888
Q ss_pred e
Q 013204 372 A 372 (447)
Q Consensus 372 ~ 372 (447)
.
T Consensus 307 ~ 307 (385)
T PRK08574 307 K 307 (385)
T ss_pred C
Confidence 6
No 303
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.55 E-value=6.1e-13 Score=129.77 Aligned_cols=237 Identities=14% Similarity=0.152 Sum_probs=139.7
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
+.+...+|+++++++. +.+..+.++||++|+..++.... ..+++||+..+.|.+..........
T Consensus 59 ~~p~~~~Le~~lA~~~---g~~~~i~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~y~~t~~~~~~~~~----- 122 (388)
T PRK07811 59 GNPTRTALEEQLAALE---GGAYGRAFSSGMAATDCLLRAVL--------RPGDHIVIPNDAYGGTFRLIDKVFT----- 122 (388)
T ss_pred CCccHHHHHHHHHHHh---CCCceEEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchHHHHHHHHhCc-----
Confidence 4556788999999886 33345677889999999998664 3457899989999765322111000
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
.++. .+..++.. +++++++.+. + ++++|++|..++..|...+ +++|.++|
T Consensus 123 -~~gi---~~~~~d~~------------------d~e~l~~~i~---~-~tklV~ie~p~NPtg~~~d----l~~I~~la 172 (388)
T PRK07811 123 -RWGV---EYTPVDLS------------------DLDAVRAAIT---P-RTKLIWVETPTNPLLSITD----IAALAELA 172 (388)
T ss_pred -CCCe---EEEEeCCC------------------CHHHHHHhcC---c-CCeEEEEECCCCCcceecC----HHHHHHHH
Confidence 0010 01111111 1366776664 2 4567777766666666554 99999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCc-ccceeEEEeC-hhHHHHhhhccCCCCccCcCCC
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSA-YMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFT 310 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg-~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~t 310 (447)
++||+++|+||++... ..+.+ .+...|+++ ++|.++|. ....|+++++ +++.+.+... .....
T Consensus 173 ~~~gi~lIvD~a~a~~-~~~~p-----~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~-------~~~~g 239 (388)
T PRK07811 173 HDAGAKVVVDNTFASP-YLQQP-----LALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFL-------QNGAG 239 (388)
T ss_pred HHcCCEEEEECCCCcc-ccCCc-----hhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHH-------HHhcC
Confidence 9999999999998632 22222 123467775 56999873 2345777765 5666655421 11112
Q ss_pred CCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-----CCcee----------eEeeeeeEEEEEee
Q 013204 311 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFA 372 (447)
Q Consensus 311 ~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~~~~~g~~~~i~~~ 372 (447)
...+|..+..++..|+.+ +...++..++...+.+.|++.+. +|... ...|.|.++.+++.
T Consensus 240 ~~~s~~~a~l~~~~L~tl--~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 314 (388)
T PRK07811 240 AVPGPFDAYLTLRGLKTL--AVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLA 314 (388)
T ss_pred CCCCHHHHHHHHhccCcH--HHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeC
Confidence 234566555455545432 23345556667777777765421 12110 12356888888886
No 304
>PLN02880 tyrosine decarboxylase
Probab=99.55 E-value=1.1e-11 Score=123.92 Aligned_cols=333 Identities=11% Similarity=0.063 Sum_probs=186.9
Q ss_pred ChHHHHHHHHHHHhcCcCCC------CeEEEeCChhhHHHHHHHHHHHHHHh-cCCCC-cceEEEEcCCCccchhhhhcc
Q 013204 76 TKPSLDLAKELLEMFTASKM------AKVFFTNSGSEANDTQVKLVWYYNNA-LGRPN-KKKFIARQKSYHGSTLIAASL 147 (447)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~~------~~v~~~~sGseA~~~Al~~~~~~~~~-~~~~~-~~~vi~~~~~yhg~~~~~~~~ 147 (447)
+....++.+++++++..... ..-++++|||+||..|+.++|..... .|..+ ++-+++.+...|-+..-+...
T Consensus 121 ~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~ 200 (490)
T PLN02880 121 TELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQI 200 (490)
T ss_pred HHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHH
Confidence 34455566777777632111 23688999999999999999865422 12222 234555566678876655554
Q ss_pred cCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhh--CCCcEEEEEEccccCCCCCccCChh
Q 013204 148 SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPAT 225 (447)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~a~vi~epv~~~~G~~~~~~~ 225 (447)
-|... ..+..++++....+ ..+.+.|++.+.+. ....+.+|+........|.+-|
T Consensus 201 lGlg~---------~~v~~Vp~d~~~~~-----------~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp--- 257 (490)
T PLN02880 201 AGIHP---------ENCRLLKTDSSTNY-----------ALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP--- 257 (490)
T ss_pred cCCCH---------HHEEEeecCCCcCC-----------cCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---
Confidence 44321 11222333210000 01147777777542 2234556666666666687877
Q ss_pred HHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCC-CCCeeeec--ccCCCcccceeEEEeChh--HHHHhhhccC
Q 013204 226 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSFA--KALSSAYMPIGAILVSPE--VSEVIHSQSN 300 (447)
Q Consensus 226 ~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~-~~d~v~~s--K~l~gg~~~~g~~~~~~~--~~~~~~~~~~ 300 (447)
+++|.++|++||+++++|-+|.|+...-..+-....|+ .+|.+++. |.+..+ .+.|+++.+.. +.+.+.....
T Consensus 258 -l~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P-~~~g~llvr~~~~l~~~~~~~~~ 335 (490)
T PLN02880 258 -LLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTN-FDCSLLWVKDRNALIQSLSTNPE 335 (490)
T ss_pred -HHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCC-ccEEEEEEeCHHHHHHHHccCHH
Confidence 99999999999999999999986532211111123454 58888865 888777 68888887642 2233321110
Q ss_pred CCCc-------cCcCCCC---CCcHHHHHHHHHHHHHHhhhcHHHHHH---HHHHHHHHhHhhccCCCceeeEeeeeeEE
Q 013204 301 TLGS-------FSHGFTY---SGHPVSCAVAIEALKIYKERNIVEQVN---KIAPKFQDGVKAFSDSPIIGEIRGTGLIL 367 (447)
Q Consensus 301 ~~~~-------~~~~~t~---~~~~~~~~aa~a~l~~~~~~~~~~~~~---~~~~~l~~~L~~l~~~~~~~~~~~~g~~~ 367 (447)
.... ......+ .+-.......+.+++.+..+++.+.++ ++.+++.+.|++..+..++.+ ....++
T Consensus 336 Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~--~~~~iv 413 (490)
T PLN02880 336 FLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP--RIFSLV 413 (490)
T ss_pred HhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC--CceEEE
Confidence 0000 0000001 111122334555677666677777777 788888887766533333222 223344
Q ss_pred EEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee----C-CEEEEecCCCC-CHHHHHHHHHHHHHHHHHHHH
Q 013204 368 GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----G-DNIMMSPPFIM-SPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 368 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----g-~~iR~~~~~~~-t~e~i~~~~~~l~~~l~~~~~ 438 (447)
.+.+....... .....+...+.++|.+.|-+.... | ..+|+++.... +++|++.+++.|.+...++.+
T Consensus 414 ~Fr~~~~~~~~---~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~ 487 (490)
T PLN02880 414 CFRLVPPKNNE---DNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLG 487 (490)
T ss_pred EEEEeCCCCCh---hhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45544211100 000113345667777666554322 2 35999876444 569999999999998877643
No 305
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.53 E-value=3.1e-11 Score=116.66 Aligned_cols=352 Identities=14% Similarity=0.142 Sum_probs=184.7
Q ss_pred CCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHH
Q 013204 30 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 109 (447)
Q Consensus 30 ~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~ 109 (447)
.....|||+.+-.++ +.+.+++...+..+.-.+ .-.+...+|++.+++++ +.+.+++++||+.|+.
T Consensus 42 ~~~~v~IDLlSDS~T-------~aMs~~q~a~~~vGDd~Y----agd~s~~~LE~~vAe~l---G~e~aV~v~sGTaAl~ 107 (460)
T PRK13237 42 RSEDVYIDLLTDSGT-------NAMSDRQWAGMMIGDEAY----AGSRNFYHLEETVQEYY---GFKHVVPTHQGRGAEN 107 (460)
T ss_pred CcCcEEEECcccCCc-------hhccHHHHHHHhhcchhh----cCCCcHHHHHHHHHHHH---CCCeEEEeCCHHHHHH
Confidence 445689999988765 334444344443322211 12345678999999997 6678999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccch-hhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGST-LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 188 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (447)
.+..+. .++| + ++ .+.+|-.+ ...+...|... .+............+.+. ...
T Consensus 108 ll~~l~-------v~pG-d-~V--p~n~~f~Tt~ahI~~~Ga~f----vDi~~d~a~~~~~~~p~t-----------gnl 161 (460)
T PRK13237 108 LLSRIA-------IKPG-Q-YV--PGNMYFTTTRYHQELNGGIF----VDIIIDEAHDAQSDHPFK-----------GNV 161 (460)
T ss_pred HHHHhC-------CCCc-C-EE--CCccchHhhHHHHHhCCcEE----EeeecccccccccCCCCC-----------CCc
Confidence 864322 1122 3 32 44444432 22132222210 000000000000000000 112
Q ss_pred HHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCC-----------cccccc
Q 013204 189 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG-----------RLGTMF 257 (447)
Q Consensus 189 ~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g-----------~~g~~~ 257 (447)
+++.|++.+...++..++.+.++-..+..|..+.+.+.++++.++|++||+.||.|-++. +| ..|...
T Consensus 162 D~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra-~gna~fI~~re~~y~~~~i 240 (460)
T PRK13237 162 DLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRC-VENAYFIKEREEGYQDKSI 240 (460)
T ss_pred CHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcch-hcChhhhcccccccCCCcH
Confidence 258888888754444555555555444444466677789999999999999999998886 43 111110
Q ss_pred c--cccCCCCCCeeeec--ccCCCcccceeEEEe-ChhHHHHhhhccCCCCccCcCCCCCCcHH-HHHHHHHHHHHHhhh
Q 013204 258 G--CDKYSIKPDLVSFA--KALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPV-SCAVAIEALKIYKER 331 (447)
Q Consensus 258 ~--~~~~~~~~d~v~~s--K~l~gg~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~-~~~aa~a~l~~~~~~ 331 (447)
. .....-..|.++|| |.++.+ . .|+++. ++++.+.++...- .+....|+.+-.- -+.+....|....+.
T Consensus 241 ~ei~~e~~s~aD~~t~S~~K~~~~~-~-GG~i~t~D~eL~~~~r~~~~---~~eG~~tygg~~grd~~alAvgl~E~~~~ 315 (460)
T PRK13237 241 KEIVHEMFSYADGCTMSGKKDCLVN-I-GGFLAMNDEELFDEAKELVV---VYEGMPSYGGMAGRDMEAMAIGIEESVQY 315 (460)
T ss_pred hHHhhhccCcCcEEEEeCCCCCCCC-C-ceEEEECCHHHHHHHHHhcc---ccCCCcCCCChhhhHHHHHHhHHHhhchH
Confidence 0 00001136888776 655432 1 244554 5678887764211 1112224443211 222222234444445
Q ss_pred cHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecC--CCCCCCCCCCcchHHHHHHH-HHHcCceEEeeC--
Q 013204 332 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADN--KSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVSG-- 406 (447)
Q Consensus 332 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~g-- 406 (447)
+...+.-...++|.+.|++. +.|++....| .-+.++...- .-+..-|+ +..+.-. .++.||-....|
T Consensus 316 ~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~gg--H~v~vda~~~lph~~~~~~p-----~~al~~~ly~~~GiR~~e~g~~ 387 (460)
T PRK13237 316 EYIEHRVGQVRYLGEKLLAA-GVPIVEPVGG--HAVFLDARRFLPHLPQDQFP-----AQALAAELYIESGVRSMERGIV 387 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCceecCCCc--eEEEEEhHHhCCCCCcccCh-----HHHHHHHHHHHhCcCeEeecce
Confidence 66666666778888888775 5565544333 3333443321 11112222 2333333 345565543111
Q ss_pred ----------------CEEEEecCC-CCCHHHHHHHHHHHHHHHHH
Q 013204 407 ----------------DNIMMSPPF-IMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 407 ----------------~~iR~~~~~-~~t~e~i~~~~~~l~~~l~~ 435 (447)
+.+|+..|- .-|.+++|.+.++|....+.
T Consensus 388 ~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 388 SAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred ecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 458998774 45999999999998887755
No 306
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.53 E-value=2.7e-11 Score=126.56 Aligned_cols=315 Identities=14% Similarity=0.133 Sum_probs=190.4
Q ss_pred hHHHHHHHHHHHhcCcCCCC-eEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccC
Q 013204 77 KPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 155 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~-~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 155 (447)
....++.+++++++ +++ -.++.++|+.|..+++.++|.|+..+|+.+++ +++...+.||+........|..
T Consensus 530 q~i~elq~~l~elt---Gmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~-~vlip~saHgtnPasa~~~G~~---- 601 (939)
T TIGR00461 530 ELIAQLEKWLCSIT---GFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRN-ICLIPVSAHGTNPASAAMAGMQ---- 601 (939)
T ss_pred HHHHHHHHHHHHHH---CCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCC-EEEEEccccCcCHHHHHHCCCE----
Confidence 45568888999886 444 34455688888888999999988888875554 4555678898864443333321
Q ss_pred CCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHH
Q 013204 156 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 235 (447)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~ 235 (447)
+..+++... +..++++|++.+...+ +++++|++...++. |.+.++ +++|+++|+
T Consensus 602 --------Vv~V~~d~~-------------G~iDle~L~~~i~~~~-~~taaV~iT~pst~-G~~e~~---I~eI~~iah 655 (939)
T TIGR00461 602 --------VVPVNCDQD-------------GNIDLVDLKNKAEQHG-DELAAVMVTYPSTH-GVFEPT---IQHACDIVH 655 (939)
T ss_pred --------EEEeccCCC-------------CCcCHHHHHHHHhhcC-CceEEEEEEeCCcC-ceeccc---HHHHHHHHH
Confidence 122332111 1122588888886533 46777777665554 545433 999999999
Q ss_pred hcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCC----CcccceeEEEeChhHHHHhhhcc--C------C
Q 013204 236 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALS----SAYMPIGAILVSPEVSEVIHSQS--N------T 301 (447)
Q Consensus 236 ~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~----gg~~~~g~~~~~~~~~~~~~~~~--~------~ 301 (447)
++|.++++|-++..- ..+ ....-.+..|+++++ |.|+ +|+..+|++.+++++...+-... . +
T Consensus 656 ~~G~~v~VDgAq~~a-l~~---l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~gr 731 (939)
T TIGR00461 656 SFGGQVYLDGANMNA-QVG---LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGG 731 (939)
T ss_pred HcCCEEEEEecChhh-CCC---CCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCC
Confidence 999999999888521 111 011112457999885 8666 34478999999988665543210 0 0
Q ss_pred CCccCcCC-CCCCcHHHHHHHHHHHHHHhhhcHH---HHHHHHHHHHHHhHhhccCCCceeeEeeeee-E--EEEEeecC
Q 013204 302 LGSFSHGF-TYSGHPVSCAVAIEALKIYKERNIV---EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL-I--LGTEFADN 374 (447)
Q Consensus 302 ~~~~~~~~-t~~~~~~~~~aa~a~l~~~~~~~~~---~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~-~--~~i~~~~~ 374 (447)
...+...+ ..+++...+..++..+..+..+++. +..-.+..++.++|++. ++++... ..+. + +.+++...
T Consensus 732 eq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~--~~~l~~~-~~~~~~hEfv~~~~~~ 808 (939)
T TIGR00461 732 SKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH--YPILFVG-TLKHVAHECILDLRPL 808 (939)
T ss_pred ccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc--CcccccC-CCCceeEEEEEeccch
Confidence 00001111 2344445555666667777666554 33444677888888652 2222110 0111 1 12333311
Q ss_pred CCCCCCCCCCcchHHHHHHHHHHcCceEEee----CCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 375 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----GDNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
+.. .......+.++|++.|++.... .+.+.+.|.-..+++|||+++++|.+..+++++
T Consensus 809 ~~~------~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 809 KAK------TGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred hhh------cCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 100 0012567999999999986432 246777777899999999999999888877765
No 307
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.52 E-value=1e-12 Score=129.51 Aligned_cols=160 Identities=18% Similarity=0.192 Sum_probs=110.0
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh---hcccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~ 151 (447)
..+...+|+++++++. +.+.+++++||++|+..++..+. ..+++||+..+.|++..... +...|..
T Consensus 55 ~~p~~~~le~~lA~l~---g~~~~v~~~sG~~Ai~~al~~l~--------~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~ 123 (418)
T TIGR01326 55 MNPTTDVLEQRIAALE---GGVAALAVASGQAAITYAILNLA--------QAGDNIVSSSYLYGGTYNLFKHTLKRLGIE 123 (418)
T ss_pred CChhHHHHHHHHHHHh---CCCeEEEEccHHHHHHHHHHHHh--------CCCCEEEEECCCcHHHHHHHHHHHHHcCcE
Confidence 4566789999999996 34578999999999999998664 33478899899997753221 1111111
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
+..++.. +++++++.+. +++++|++|.+++..|.+.+ +++|.
T Consensus 124 ------------v~~v~~~------------------d~~~l~~~l~----~~t~~V~le~p~NPtg~v~d----l~~I~ 165 (418)
T TIGR01326 124 ------------VRFVDPD------------------DPEEFEKAID----ENTKAVFAETIGNPAINVPD----IEAIA 165 (418)
T ss_pred ------------EEEECCC------------------CHHHHHHhcC----cCCeEEEEECCCCCCCeecC----HHHHH
Confidence 1111110 1366776664 34667888887777777665 99999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee--eecccCCCcccceeEEEeCh
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVSP 289 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v--~~sK~l~gg~~~~g~~~~~~ 289 (447)
++|++||+++|+||++. .+.. .......+|++ +++|.++|.+.++|+++.++
T Consensus 166 ~la~~~~i~livD~t~~-~~~~-----~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 166 EVAHAHGVPLIVDNTFA-TPYL-----CRPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred HHHHHcCCEEEEECCCc-hhhc-----CCchhcCCeEEEECccccccCCccceEEEEEec
Confidence 99999999999999986 2211 12222346877 46899998558999988854
No 308
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.52 E-value=1.6e-12 Score=125.37 Aligned_cols=231 Identities=17% Similarity=0.115 Sum_probs=139.9
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
..+...+|+++++++. +.+.++.++||++|+..++.++ ..+++||+..+.|.+......... +
T Consensus 52 ~~p~~~~le~~lA~le---g~~~~v~~~sG~aAi~~~l~~l---------~~GD~VI~~~~~yg~~~~~~~~~~--~--- 114 (364)
T PRK07269 52 KNPTRAKLEETLAAIE---SADYALATSSGMSAIVLAFSVF---------PVGSKVVAVRDLYGGSFRWFNQQE--K--- 114 (364)
T ss_pred CCccHHHHHHHHHHHh---CCCeEEEeCCHHHHHHHHHHHh---------CCCCEEEEecCCcCchHHHHHHHH--h---
Confidence 4556788999999986 5668999999999999988543 234788888888866532111100 0
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
.... .+++. .+.+++++.+. + ++++|++|..++..|.... +++|+++|
T Consensus 115 -~~~~------~~~~~-----------------~d~~~l~~~i~---~-~TklV~lesP~NPtg~~~d----i~~I~~la 162 (364)
T PRK07269 115 -EGRF------HFTYA-----------------NTEEELIAAIE---E-DTDIVYIETPTNPLMVEFD----IEKVAKLA 162 (364)
T ss_pred -cCcE------EEEec-----------------CCHHHHHHhcC---c-CceEEEEECCCCCCCeeeC----HHHHHHHH
Confidence 0000 00000 01266666664 2 4556766666555565554 99999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCCCcc-cceeEEEe-ChhHHHHhhhccCCCCccCcCCC
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAY-MPIGAILV-SPEVSEVIHSQSNTLGSFSHGFT 310 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~gg~-~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~t 310 (447)
+++|+++|+||++... .. ....+.-.|++++| |.++|.+ .-.|+++. ++++.+.+... .....
T Consensus 163 ~~~gi~vvvD~t~~~~-~~-----~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~-------~~~~G 229 (364)
T PRK07269 163 HAKGAKVIVDNTFYSP-IY-----QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYN-------LNTTG 229 (364)
T ss_pred HHcCCEEEEECCCccc-cc-----CCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHH-------HHHhC
Confidence 9999999999996411 11 12234457888764 8887621 11355666 46676666421 11112
Q ss_pred CCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCcee--eEeeeeeEEEEEee
Q 013204 311 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIG--EIRGTGLILGTEFA 372 (447)
Q Consensus 311 ~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~--~~~~~g~~~~i~~~ 372 (447)
...+|+.++.++..|+-+ +...++..++..++.+.|++. |.+. ..++.|.++.+.+.
T Consensus 230 ~~~s~~~a~l~~~~L~tL--~~r~~~~~~na~~~a~~L~~~---p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 230 AVLSPFDSYLLMRGLKTL--SLRMERSTANAQEVVAFLKKS---PAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred CCCCHHHHHHHHcCCCcH--HHHHHHHHHHHHHHHHHHHhC---CCccEEeCCCcCcEEEEEEC
Confidence 345777777666666543 223455566666776666643 4222 22577888888874
No 309
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.52 E-value=1.3e-11 Score=130.96 Aligned_cols=358 Identities=15% Similarity=0.125 Sum_probs=195.0
Q ss_pred CCCEEEecCCccccccCCCCCHHHH-HHHHHHHhcCC-cccc---cCcCCChHHHHHHHHHHHhcCcCCCC-eEEEeCCh
Q 013204 31 NGKKYLDSLAGLWCTALGGSEPRLV-AAATAQLNTLP-FYHS---FWNRTTKPSLDLAKELLEMFTASKMA-KVFFTNSG 104 (447)
Q Consensus 31 dg~~~lD~~~~~~~~~lG~~~p~v~-~a~~~~~~~~~-~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~-~v~~~~sG 104 (447)
++..|||..+.. .-.|..+ +++.+...+.. ..++ ......+...+..+.+++++.....+ .|+|++++
T Consensus 33 ~~~iYLD~Aatt------~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsna 106 (805)
T PLN02724 33 KGVVYLDHAGAT------LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGA 106 (805)
T ss_pred CCCEeEeCCCCC------CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCCh
Confidence 346899986552 2244444 44444544321 1111 11112344556667777777433334 58999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhH
Q 013204 105 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 184 (447)
Q Consensus 105 seA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (447)
|+|+..+..... - .+++.||+ ...-|.+....+.... +.+.. +..++.+.... .+......
T Consensus 107 T~alnlva~~l~------~-~~gd~Iv~-t~~eH~svl~~~~~a~----~~G~~-----v~~v~~~~~~~--~~~~~~g~ 167 (805)
T PLN02724 107 TAALKLVGETFP------W-SSESHFCY-TLENHNSVLGIREYAL----EKGAA-----AIAVDIEEAAN--QPTNSQGS 167 (805)
T ss_pred HHHHHHHHHHCC------C-CCCCeEEE-eeccccchHHHHHHHH----HcCCe-----EEeccchhccc--cccccccc
Confidence 999998866531 1 22355655 5566665433322110 01110 11111110000 00000000
Q ss_pred HHHHHHHHHHHHHH----h--hCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhc--------CCEEEEehhhcCC
Q 013204 185 YSTRLANNLEDLIL----K--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--------DILFIADEVICAF 250 (447)
Q Consensus 185 ~~~~~~~~le~~l~----~--~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~--------g~~li~DEv~~g~ 250 (447)
. ....+++++.+. . ...+++.+|.+..+.+..|.+.| ++.+..+++.. ++++++|-+|+ +
T Consensus 168 ~-~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~-~ 241 (805)
T PLN02724 168 V-VVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG-C 241 (805)
T ss_pred c-ccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh-c
Confidence 0 000133444321 1 11235578999999999999988 66665545432 36899999997 5
Q ss_pred CccccccccccCCCCCCeeeec--ccCCCcccceeEEEeChhHHHHhhhccCCCC--------------------ccCcC
Q 013204 251 GRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLG--------------------SFSHG 308 (447)
Q Consensus 251 g~~g~~~~~~~~~~~~d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~--------------------~~~~~ 308 (447)
|.. + ++...+.+|++++| |.++++ .++|++++++++.+.+.......+ .+.
T Consensus 242 g~~--p--iDv~~~~~Dfl~~S~HK~~GgP-~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE-- 314 (805)
T PLN02724 242 GTS--P--PDLSRYPADFVVVSFYKIFGYP-TGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFE-- 314 (805)
T ss_pred CCC--C--CChhhcCCCEEEEecceeccCC-CCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhc--
Confidence 432 1 23334568999988 877665 579999999988766542100000 011
Q ss_pred CCCCCcHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHhHhhccC---CCceeeE---------eeeeeEEEEEeec
Q 013204 309 FTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSD---SPIIGEI---------RGTGLILGTEFAD 373 (447)
Q Consensus 309 ~t~~~~~~~~~aa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~---~~~~~~~---------~~~g~~~~i~~~~ 373 (447)
.-+.|..++++..++++.+.+ +...++.+.+.+++.+.|+++.. .+.+.-. ...+.++.+.+..
T Consensus 315 -~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~ 393 (805)
T PLN02724 315 -DGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKR 393 (805)
T ss_pred -CCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEc
Confidence 113455666666677776654 45667888889999999988731 1122111 1245566666654
Q ss_pred CCCCCCCCCCCcchHHHHHHHHHHcCceEEee----------------------------------------CCEEEEec
Q 013204 374 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------------------------------GDNIMMSP 413 (447)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------------------------------------g~~iR~~~ 413 (447)
.....- ....+...+.++||.++.+ .+.+|+|+
T Consensus 394 ~~~~~v-------~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~ 466 (805)
T PLN02724 394 ADGSWV-------GHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSF 466 (805)
T ss_pred CCCCEe-------CHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEc
Confidence 321110 0112233334556666521 14599999
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q 013204 414 PFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 414 ~~~~t~e~i~~~~~~l~~~l~ 434 (447)
.+.+|.+|||++++.|++..-
T Consensus 467 g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 467 GYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred CccCCHHHHHHHHHHHHHHhh
Confidence 999999999999999999764
No 310
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.52 E-value=4.7e-11 Score=116.40 Aligned_cols=311 Identities=12% Similarity=0.087 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEE
Q 013204 52 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 131 (447)
Q Consensus 52 p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi 131 (447)
++-.+++.+.+..+.. .+..+...++++++++.+ +.+++++++||++|+..++..+. -..+++||
T Consensus 11 ~~~~~~~~~~l~~~~~-----~g~~~~~~~~e~~la~~~---g~~~~v~~~sgt~al~~~l~~~~-------~~~Gd~Vi 75 (375)
T PRK11706 11 GTELDYIQQAMSSGKL-----CGDGGFTRRCQQWLEQRF---GSAKVLLTPSCTAALEMAALLLD-------IQPGDEVI 75 (375)
T ss_pred HHHHHHHHHHHHcCCc-----cCCCHHHHHHHHHHHHHh---CCCeEEEECCHHHHHHHHHHHhC-------CCCCCEEE
Confidence 3446677777765422 123455678888888886 45689999999999988887541 12357899
Q ss_pred EEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEc
Q 013204 132 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAE 211 (447)
Q Consensus 132 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~e 211 (447)
+..+.|..........+..+. .++.... . -..+++++++.+. + ++++|++.
T Consensus 76 v~~~t~~~~~~~~~~~G~~~v-------------~~d~d~~-----------~-~~~d~~~le~~i~---~-~tk~i~~~ 126 (375)
T PRK11706 76 MPSYTFVSTANAFVLRGAKIV-------------FVDIRPD-----------T-MNIDETLIEAAIT---P-KTRAIVPV 126 (375)
T ss_pred ECCCCcHHHHHHHHHcCCEEE-------------EEecCCC-----------c-CCcCHHHHHHhcC---C-CCeEEEEe
Confidence 988888776544433222221 1111100 0 0011367777664 2 34455532
Q ss_pred cccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCc--cccccccccCCCCCCeeeec----ccCCCcccceeEE
Q 013204 212 PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR--LGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAI 285 (447)
Q Consensus 212 pv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~--~g~~~~~~~~~~~~d~v~~s----K~l~gg~~~~g~~ 285 (447)
+ ..|...+ +++|.++|++||+++|.|++|+ +|. .|.. .+--.|+.+|| |.++.| .+.+++
T Consensus 127 --~-~~G~~~~----~~~i~~la~~~~i~vIeD~a~a-~g~~~~~~~-----~g~~~~~~~~Sf~~~K~l~~g-~gG~~~ 192 (375)
T PRK11706 127 --H-YAGVACE----MDTIMALAKKHNLFVVEDAAQG-VMSTYKGRA-----LGTIGHIGCFSFHETKNYTAG-EGGALL 192 (375)
T ss_pred --C-CCCCccC----HHHHHHHHHHcCCEEEEECccc-cccccCCee-----eecCcCEEEEeCCCCcccccc-CCeEEE
Confidence 2 2454444 8999999999999999999997 433 1211 12224777888 988765 455666
Q ss_pred EeChhHHHHhhhccCCC--C-c-----------cCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhc
Q 013204 286 LVSPEVSEVIHSQSNTL--G-S-----------FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF 351 (447)
Q Consensus 286 ~~~~~~~~~~~~~~~~~--~-~-----------~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l 351 (447)
+.++++.+.+......- + . ...+.++-.+.+.++.+++-++.+ ++..++.+++.+++++.|..+
T Consensus 193 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l--~~~~~~R~~~~~~~~~~L~~~ 270 (375)
T PRK11706 193 INDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAA--DRINQRRLALWQRYYDALAPL 270 (375)
T ss_pred ECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCC
Confidence 66778776543221100 0 0 001223333445555555555543 344566666777777777665
Q ss_pred cCCCcee------eEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-----------------C--
Q 013204 352 SDSPIIG------EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------------G-- 406 (447)
Q Consensus 352 ~~~~~~~------~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----------------g-- 406 (447)
...+.+. .......++.+.+.... ....+.+.|.++||.++.. +
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~ 339 (375)
T PRK11706 271 AEAGRIELPSIPDDCKHNAHMFYIKLRDLE-----------DRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGED 339 (375)
T ss_pred CcCCeeecCCCCCCCceeeEEEEEEECCcC-----------CHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCC
Confidence 3111110 11111223334443211 1456888999999985411 0
Q ss_pred --------CEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 407 --------DNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 407 --------~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
..+.+-.....+++|++..++.|++++
T Consensus 340 p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 340 RYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred hHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 224444445578999999999998764
No 311
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.52 E-value=1.9e-12 Score=125.47 Aligned_cols=235 Identities=11% Similarity=0.134 Sum_probs=137.2
Q ss_pred hHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCC
Q 013204 77 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK 156 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 156 (447)
+...+|+++++++. +.+.+++++||++|+..++.... ..+++||+.++.|.+........- ..
T Consensus 61 pt~~~Le~~iA~le---~~~~~~~~~sG~~Ai~~~l~all--------~~GD~Vvv~~~~Y~~t~~l~~~~l------~~ 123 (394)
T PRK09028 61 PTHFAFQAAIVELE---GGAGTALYPSGAAAISNALLSFL--------KAGDHLLMVDSCYEPTRDLCDKIL------KG 123 (394)
T ss_pred chHHHHHHHHHHHh---CCCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEECCCcHHHHHHHHHhh------hh
Confidence 34568889999884 33468999999999999987653 345789999999976643211100 00
Q ss_pred CCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHh
Q 013204 157 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK 236 (447)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~ 236 (447)
++.. +..++.. + .+++++.+. +++++|++|.+.+..|.+.+ +++|+++|++
T Consensus 124 ~Gi~---v~~v~~~----------~--------~e~l~~~l~----~~TklV~lespsNPtg~v~d----l~~I~~la~~ 174 (394)
T PRK09028 124 FGIE---TTYYDPM----------I--------GEGIRELIR----PNTKVLFLESPGSITMEVQD----VPTLSRIAHE 174 (394)
T ss_pred cceE---EEEECCC----------C--------HHHHHHhcC----cCceEEEEECCCCCCCcHHH----HHHHHHHHHH
Confidence 1110 0011100 0 145666553 35678888887777666654 9999999999
Q ss_pred cCCEEEEehhhcCCCccccccccccCCCCCCeeee--cccCCCc-ccceeEEEeChhHHHHhhhccCCCCccCcCCCCCC
Q 013204 237 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSA-YMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG 313 (447)
Q Consensus 237 ~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~--sK~l~gg-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 313 (447)
||+++++|++|+. +. .+.-..+-+|+++. .|.++|. -.-.|+++.++++.+.+.... ...-...
T Consensus 175 ~g~~lvvD~t~a~-p~-----~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~-------~~~G~~~ 241 (394)
T PRK09028 175 HDIVVMLDNTWAS-PI-----NSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHS-------YLMGQCT 241 (394)
T ss_pred cCCEEEEECCccc-cc-----cCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHH-------HhcCCCC
Confidence 9999999999962 11 12222344788864 5988773 233466666777666554211 0111234
Q ss_pred cHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-----CCcee----------eEeeeeeEEEEEee
Q 013204 314 HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFA 372 (447)
Q Consensus 314 ~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~~~~~g~~~~i~~~ 372 (447)
+|..+.-.+..|+-+. -..++..++...+.+.|++-+. +|... ...|.|.++.+.+.
T Consensus 242 ~p~~a~l~~rgl~TL~--lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 313 (394)
T PRK09028 242 SPDDVYLAMRGLRTLG--VRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLK 313 (394)
T ss_pred CHHHHHHHHcccCcHH--HHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEEC
Confidence 5666555444444221 1234445555666666654321 12111 12356888888886
No 312
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.51 E-value=4.7e-12 Score=123.62 Aligned_cols=213 Identities=15% Similarity=0.119 Sum_probs=125.7
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh---hcccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~ 151 (447)
+.+...+|+++++++. +.+.+++++||++|+..++.... .++++||+.++.|.+..... ....|..
T Consensus 63 ~~pt~~~Le~~lA~l~---g~~~~l~~~sgt~Ai~~~l~al~--------~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~ 131 (394)
T PRK07050 63 ATPTSLALAQRLAEIE---GGRHALLQPSGLAAISLVYFGLV--------KAGDDVLIPDNAYGPNRDHGEWLARDFGIT 131 (394)
T ss_pred CCHHHHHHHHHHHHHh---CCCeEEEeccHHHHHHHHHHHHh--------CCCCEEEEecCCcccHHHHHHHHHHhcCeE
Confidence 5666788999999886 45689999999999999998663 34578999999997654211 1111111
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
+..++..+ .+++++.+. +++++|++|...+..|.. ..+++|.
T Consensus 132 ------------v~~vd~~~------------------~~~l~~~i~----~~tklV~le~p~Np~~~~----~di~~I~ 173 (394)
T PRK07050 132 ------------VRFYDPLI------------------GAGIADLIQ----PNTRLIWLEAPGSVTMEV----PDVPAIT 173 (394)
T ss_pred ------------EEEECCCC------------------HHHHHHhcC----CCCeEEEEECCCCCCccH----hhHHHHH
Confidence 01111100 145666554 345677777665555433 3499999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCc-ccceeEEEe-ChhHHHHhhhccCCCCccCc
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSA-YMPIGAILV-SPEVSEVIHSQSNTLGSFSH 307 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg-~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 307 (447)
++|+++|+++|+|++|. .+.. +.-.....|+++ ++|.++|+ ..+.|+++. ++++.+.++.. ..
T Consensus 174 ~ia~~~gi~livD~a~a-~~~~-----~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~-------~~ 240 (394)
T PRK07050 174 AAARARGVVTAIDNTYS-AGLA-----FKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLA-------RM 240 (394)
T ss_pred HHHHHcCCEEEEECCcc-cccc-----cCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHH-------HH
Confidence 99999999999999986 2211 111112357664 67988764 235676665 66777766531 11
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhc
Q 013204 308 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF 351 (447)
Q Consensus 308 ~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l 351 (447)
....+.+|..+..++..++-+. ...++..++..++.+.|++.
T Consensus 241 ~~G~~~~~~~a~l~lr~l~tl~--~Rl~~~~~~a~~la~~L~~~ 282 (394)
T PRK07050 241 RLGIGVSADDCSLVLRGLPSLQ--VRLAAHDRSALEVAEWLKAR 282 (394)
T ss_pred hcCCCCCHHHHHHHHcCCCcHH--HHHHHHHHHHHHHHHHHHhC
Confidence 1122445555443433332221 12344444555566666543
No 313
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.51 E-value=5.8e-12 Score=121.79 Aligned_cols=321 Identities=12% Similarity=0.032 Sum_probs=174.7
Q ss_pred CCHHHHHHHHHHHhcCCcccc----cCcC---CChHHHHHHHHHHHhcCcCCCCeEEEeCC-hhhHHHHHHHHHHHHHHh
Q 013204 50 SEPRLVAAATAQLNTLPFYHS----FWNR---TTKPSLDLAKELLEMFTASKMAKVFFTNS-GSEANDTQVKLVWYYNNA 121 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~~~~~----~~~~---~~~~~~~l~~~l~~~~~~~~~~~v~~~~s-GseA~~~Al~~~~~~~~~ 121 (447)
.++.|++|+.+.+.+....++ .... ..+...+..+.+++++.....++++|++| ||+|++.++..+..
T Consensus 10 ~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~---- 85 (355)
T cd00611 10 LPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLG---- 85 (355)
T ss_pred CCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC----
Confidence 579999999998854221111 1100 11445677788888875334568999976 99999999986631
Q ss_pred cCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccC-CCCCCChhHHHHHHHHHHHHHHHhh
Q 013204 122 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY-AHPGETEEEYSTRLANNLEDLILKE 200 (447)
Q Consensus 122 ~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~le~~l~~~ 200 (447)
.+ ++..+| ..+.|..+........|.. +..+++++...+ +.+ +..+..+
T Consensus 86 ~~--~~~~~i-~~g~~~~~~~~~a~~~g~~------------~~~~~~~~~g~~~~~~------------~~~~~~~--- 135 (355)
T cd00611 86 DK--GTADYV-VTGAWSAKAAKEAKRYGGV------------VVIVAAKEEGKYTKIP------------DVETWDL--- 135 (355)
T ss_pred CC--CeEEEE-ECCHHHHHHHHHHHhcCCC------------cEEEecccccCCCCCC------------CHhhcCC---
Confidence 01 112222 2333322111111111111 111111110000 000 1111111
Q ss_pred CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeecccCCCccc
Q 013204 201 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYM 280 (447)
Q Consensus 201 ~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~gg~~ 280 (447)
. +++.+|.+..+.+..|.+. .++++.||+++++|-+|+ +|.. +.-.+.+++ ++...-|.+ |+ .
T Consensus 136 ~-~~~~lV~~~h~~t~tG~~~---------~~i~~~~g~~~~VDa~qs-~g~~--~idv~~~~~--~~ss~~K~l-GP-~ 198 (355)
T cd00611 136 A-PDAAYVHYCSNETIHGVEF---------DEVPDTGGVPLVADMSSN-ILSR--PIDVSKFGV--IYAGAQKNL-GP-A 198 (355)
T ss_pred C-CCCCEEEEeCCcccccEEc---------ceecccCCCeEEEEcccc-ccCC--CCCHHHhCE--EEeeccccc-CC-C
Confidence 1 3455677777666666652 245566999999999998 5432 222333331 221233766 45 6
Q ss_pred ceeEEEeChhHHHHhhhccCCC---Cc-cCcCC-CCCCcHHHHHHHHHHHHHHhhh-c---HHHHHHHHHHHHHHhHhhc
Q 013204 281 PIGAILVSPEVSEVIHSQSNTL---GS-FSHGF-TYSGHPVSCAVAIEALKIYKER-N---IVEQVNKIAPKFQDGVKAF 351 (447)
Q Consensus 281 ~~g~~~~~~~~~~~~~~~~~~~---~~-~~~~~-t~~~~~~~~~aa~a~l~~~~~~-~---~~~~~~~~~~~l~~~L~~l 351 (447)
++|+++.++++.+.+....... .. ..... .++++..++.+..++++.+.+. + +.++.+++.+++++.|+++
T Consensus 199 G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~ 278 (355)
T cd00611 199 GVTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNS 278 (355)
T ss_pred ceEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 7999999999887654321000 00 00111 2345556777777888887655 3 4566677788888888877
Q ss_pred cCC-Cceee-EeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC---CEEEEecCCCCCHHHHHHHH
Q 013204 352 SDS-PIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVDELI 426 (447)
Q Consensus 352 ~~~-~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g---~~iR~~~~~~~t~e~i~~~~ 426 (447)
++. ..... ....+..+.+.+... .+...+...+.++|++..... +.+|+++...+|++||++++
T Consensus 279 ~gl~~~~~~~~~rs~~vvsf~~~~~-----------~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~ 347 (355)
T cd00611 279 NGFYRGPVDKRARSRMNVPFRLGKE-----------ELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALA 347 (355)
T ss_pred ccccccCCCHHHcCceEEEEEcCCh-----------hhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHH
Confidence 432 11111 011123344444331 012335467888999844331 56999999999999999999
Q ss_pred HHHHHH
Q 013204 427 SKYGKA 432 (447)
Q Consensus 427 ~~l~~~ 432 (447)
+.|++.
T Consensus 348 ~al~~~ 353 (355)
T cd00611 348 DFMKEF 353 (355)
T ss_pred HHHHHH
Confidence 999874
No 314
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.50 E-value=9.6e-12 Score=115.78 Aligned_cols=311 Identities=14% Similarity=0.156 Sum_probs=198.5
Q ss_pred hHHHHHHHHHHHhcCcCCCCeEEEeC-ChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccC
Q 013204 77 KPSLDLAKELLEMFTASKMAKVFFTN-SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 155 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~~v~~~~-sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 155 (447)
+...+|.++|+++ .+++.|.+-+ +|+++-.+.|.+++.|+..+|...|+.+|+ ..+.||..-......|..+
T Consensus 109 ~li~~Lq~~L~~I---TG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LI-P~SAHGTNPASAam~G~~V--- 181 (496)
T COG1003 109 ELIYELQEWLKEI---TGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLI-PDSAHGTNPASAAMAGFKV--- 181 (496)
T ss_pred HHHHHHHHHHHHh---cCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEe-eccccCCChhhHhhcCceE---
Confidence 3445677777777 4888888875 999999999999999999999776665555 5699998665555454332
Q ss_pred CCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHH
Q 013204 156 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 235 (447)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~ 235 (447)
..++|.+. +..++++|++.+. ++++++++...+.-| +. .+-+.+|+++.+
T Consensus 182 ---------V~V~~~~~-------------G~VDlddLk~k~~----~~~AalMiTnPsT~G--vF--E~~I~ei~~ivH 231 (496)
T COG1003 182 ---------VVVKCDEN-------------GNVDLDDLRAKAE----DNLAALMITNPSTLG--VF--EEDIREICEIVH 231 (496)
T ss_pred ---------EEEecCCC-------------CCccHHHHHHHhc----cceeEEEeccCcccc--cc--hhhHHHHHHHHH
Confidence 33444322 2234688888775 577777776554433 32 244889999999
Q ss_pred hcCCEEEEehh----hcCCCcccccc-ccccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhc----cC------
Q 013204 236 KYDILFIADEV----ICAFGRLGTMF-GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQ----SN------ 300 (447)
Q Consensus 236 ~~g~~li~DEv----~~g~g~~g~~~-~~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~----~~------ 300 (447)
++|..|+.|-+ +.|..|.|..+ -..++++.- ||+-.-|||+.+.|-+..++++...+-.. ..
T Consensus 232 ~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNLHK---TF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~ 308 (496)
T COG1003 232 EAGGQVYYDGANLNAIVGLARPGDMGFDVVHLNLHK---TFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLD 308 (496)
T ss_pred HcCCEEEecCcchhhhhccccccccccceEEeeccc---ccccCCCCCCCCCCceehHhhccccCCCCcccCCCcccccc
Confidence 99999999965 33555555422 233333322 56666777777888888887776655320 00
Q ss_pred --CCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHH---HHHHHHHHHHHHhHhhccCCCceeeEeeee-eE--EEEEee
Q 013204 301 --TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV---EQVNKIAPKFQDGVKAFSDSPIIGEIRGTG-LI--LGTEFA 372 (447)
Q Consensus 301 --~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~---~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g-~~--~~i~~~ 372 (447)
...+......+.++..-...+++-+..+..+++. +..--+..++..+|+.- ++++. .+.. .. +.++..
T Consensus 309 ~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y--~~~~~~~HE~ild~r 384 (496)
T COG1003 309 YDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPY--TGENRVAHECILDAR 384 (496)
T ss_pred CCCCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--Ccccc--CCCCcceeEEEeech
Confidence 0111222345556666666677777777666554 33334667888888752 22211 1111 00 112222
Q ss_pred ---cCCCCCCCCCCCcchHHHHHHHHHHcCceEE----e--eCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 013204 373 ---DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----V--SGDNIMMSPPFIMSPEEVDELISKYGKALKATEERV 440 (447)
Q Consensus 373 ---~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~--~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~ 440 (447)
..... -..++.++|++.|++.- | ..+.+.+-|.-.-+++++|+++++|.++.++.++..
T Consensus 385 ~l~~~~Gv---------~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~~ 452 (496)
T COG1003 385 PLKKETGV---------RALDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAVP 452 (496)
T ss_pred HhHhhcCC---------cHHHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 11111 25679999999999854 2 347799999999999999999999999998877643
No 315
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.50 E-value=4.5e-11 Score=115.28 Aligned_cols=351 Identities=15% Similarity=0.165 Sum_probs=186.5
Q ss_pred CCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHH
Q 013204 30 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 109 (447)
Q Consensus 30 ~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~ 109 (447)
.....|||+.+-.++ +.+.++-...+..+.-.+ .-++...+|++.+++++ +.+.+++++||+.|..
T Consensus 35 ~~~~v~iDLltDsgT-------~aMs~~q~a~~~~GDe~y----ag~~s~~~lE~~va~~~---G~~~av~v~sGT~Al~ 100 (450)
T TIGR02618 35 NSEDVYIDLLTDSGT-------NAMSDKQWAGLMMGDEAY----AGSRNFYHLERTVRELY---GFKYVVPTHQGRGAEN 100 (450)
T ss_pred ccCceEEEcccCCCc-------HHHHHHHHHHhhhcchhh----cCCCcHHHHHHHHHHHH---CCCeEEEcCCHHHHHH
Confidence 445689999987654 556555233333222211 13445778999999997 6778999999999977
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCC--cceecCCCCcccCCCCCCChhHHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAP--FVLHTDCPHYWRYAHPGETEEEYST 187 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (447)
.+..+. -++ ++.| ..+.|...+.......|... .+.+.. .-...+.| ++ ..
T Consensus 101 ll~~l~-------l~p-GDeV--psn~~f~Tt~ahIe~~Gav~----vDi~~dea~~~~~~~p--~~-----------Gn 153 (450)
T TIGR02618 101 LLSQIA-------IKP-GDYV--PGNMYFTTTRYHQEKNGATF----VDIIIDEAHDAQLNIP--FK-----------GN 153 (450)
T ss_pred HHHHhC-------CCC-cCEE--CCceeHHHHHHHHHhCCeEE----EeeecccccccccCCC--CC-----------CC
Confidence 643221 112 2433 33333233333232222210 011000 00000000 00 11
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc---ccccCCC
Q 013204 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF---GCDKYSI 264 (447)
Q Consensus 188 ~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~---~~~~~~~ 264 (447)
.+++.|++.+...+...++.|.++...+..|..+.+.+.++++.++|++||+.||.|-++. ++- +... .-.+.+.
T Consensus 154 iD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~-~gN-A~~I~~re~g~~~~ 231 (450)
T TIGR02618 154 VDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRC-VEN-AYFIKEREQGYEDK 231 (450)
T ss_pred cCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccch-hhC-hhhhhcccccccCC
Confidence 1247888888753333455666666555544467778899999999999999999998875 311 0000 0001111
Q ss_pred -----------CCCeeeecccCCCcccceeEEEe--ChhHHHHhhhccCCCCccCcCCCCCCcH-HHHHHHHHHHHHHhh
Q 013204 265 -----------KPDLVSFAKALSSAYMPIGAILV--SPEVSEVIHSQSNTLGSFSHGFTYSGHP-VSCAVAIEALKIYKE 330 (447)
Q Consensus 265 -----------~~d~v~~sK~l~gg~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~t~~~~~-~~~~aa~a~l~~~~~ 330 (447)
..|.+++| +.--++.|+|.+++ ++++++.++......+.+ .++.+-. -.+.+...+|+...+
T Consensus 232 ~i~ei~~e~~~~aD~~~~S-~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~---~tyGgla~r~~~ala~gL~e~~~ 307 (450)
T TIGR02618 232 SIAEILKEMMSYADGCTMS-GKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGM---PSYGGLAGRDMEAMAIGIREAVD 307 (450)
T ss_pred CHHHHHHHHhccCcEEEEe-eccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCc---cccCchhhhhHHHHHHHHHHhhh
Confidence 24665544 32111146555554 677888776431111111 1333211 123333334554444
Q ss_pred hcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecC--CCCCCCCCCCcchHHHHHHH-HHHcCceEEeeC-
Q 013204 331 RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADN--KSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVSG- 406 (447)
Q Consensus 331 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~g- 406 (447)
....++.....++|.+.|++. +.+++.. ..|..+.++...- .-+...|+ +..+.-. .++.||-....|
T Consensus 308 ~~y~~~r~~~a~~La~~L~~~-Gvpv~~p--~ggh~V~vda~~~lph~~~~~~p-----~~al~~~ly~~~gir~~e~g~ 379 (450)
T TIGR02618 308 YEYIEHRVKQVRYLGDKLKAA-GVPIVEP--VGGHAVFLDARRFLPHIPQDQFP-----AQSLAASIYVETGVRSMERGI 379 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCcccCC--CCcceEEEEhHHhCCCCChhhCh-----HHHHHHHHHHHhCccEEeecc
Confidence 455566666788999999887 5555433 3445555555431 11222222 2233333 345565443211
Q ss_pred -----------------CEEEEecCC-CCCHHHHHHHHHHHHHHHHH
Q 013204 407 -----------------DNIMMSPPF-IMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 407 -----------------~~iR~~~~~-~~t~e~i~~~~~~l~~~l~~ 435 (447)
+.+|+..|- .-|.+++|.+.++|....+.
T Consensus 380 ~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 380 VSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred eecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 458998774 45999999999998887765
No 316
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.50 E-value=6.9e-11 Score=116.83 Aligned_cols=300 Identities=14% Similarity=0.134 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHH-HhcCCCCcceEEEEcCCCccchhhhhcccCCccccCC
Q 013204 78 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYN-NALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK 156 (447)
Q Consensus 78 ~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~-~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 156 (447)
...++++++++++ +.+++++++||++|+..|+..+.... ...+-.+++.||+..++|.+........+..+.
T Consensus 64 ~~~~fe~~lA~~~---g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv---- 136 (438)
T PRK15407 64 FNDAFEKKLAEFL---GVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPV---- 136 (438)
T ss_pred hHHHHHHHHHHHh---CCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEE----
Confidence 4678999999887 44579999999999999998653110 000112347899989998776544433222111
Q ss_pred CCCCCCcceecCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHH
Q 013204 157 FDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 235 (447)
Q Consensus 157 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~ 235 (447)
.++.. ..+. .+++++++.+. +++++|++.+..+ ... .+++|.++|+
T Consensus 137 ---------~vdvd~~~~~-------------id~~~le~~i~----~~tkaVi~~~~~G---~p~----dl~~I~~la~ 183 (438)
T PRK15407 137 ---------FVDVELPTYN-------------IDASLLEAAVS----PKTKAIMIAHTLG---NPF----DLAAVKAFCD 183 (438)
T ss_pred ---------EEecCCCcCC-------------cCHHHHHHHcC----cCCeEEEEeCCCC---Chh----hHHHHHHHHH
Confidence 11111 0000 01366776654 3566777776533 222 3899999999
Q ss_pred hcCCEEEEehhhcCCCccccccccccCCCCCCeeeec----ccCCCcccceeEEEeC-hhHHHHhhhccCCC--------
Q 013204 236 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAILVS-PEVSEVIHSQSNTL-------- 302 (447)
Q Consensus 236 ~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s----K~l~gg~~~~g~~~~~-~~~~~~~~~~~~~~-------- 302 (447)
+||++||.|++|+ +|..-.. ...|-..|+.+|| |.++.| ..|+++.+ +++.+.+......-
T Consensus 184 ~~gi~vIeDaa~a-~G~~~~g---~~~G~~gd~~~fSf~~~k~~~~g--eGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~ 257 (438)
T PRK15407 184 KHNLWLIEDNCDA-LGSTYDG---RMTGTFGDIATLSFYPAHHITMG--EGGAVFTNDPLLKKIIESFRDWGRDCWCAPG 257 (438)
T ss_pred HCCCEEEEECccc-hhhhcCC---eeeeccCceEEEeCCCCCCcccc--CceEEEECCHHHHHHHHHHHHhCcccccccc
Confidence 9999999999997 4322111 1122224777765 667654 23677765 44554433211000
Q ss_pred ---------------------Ccc---CcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-CCce
Q 013204 303 ---------------------GSF---SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-SPII 357 (447)
Q Consensus 303 ---------------------~~~---~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~-~~~~ 357 (447)
..+ ..+..+..+.+.++.+++-|+.+ ++..++.+++.+++.+.|..+.. ...+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l--~~~~~~R~~~a~~y~~~L~~~~~~~~~~ 335 (438)
T PRK15407 258 CDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKL--PGFIEARKANFAYLKEGLASLEDFLILP 335 (438)
T ss_pred cccccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCCccccC
Confidence 000 12334445667777777777655 44567777777888888876531 1111
Q ss_pred eeEee-eee--EEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-------------------C---------
Q 013204 358 GEIRG-TGL--ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------------------G--------- 406 (447)
Q Consensus 358 ~~~~~-~g~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------------------g--------- 406 (447)
....+ ... .+.+.+...... ....+.+.|.++||-+... +
T Consensus 336 ~~~~~~~~~~~~~~i~~~~~~~~---------~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~ 406 (438)
T PRK15407 336 EATPNSDPSWFGFPITVKEDAGF---------TRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIM 406 (438)
T ss_pred cCCCCCeeEEEEEEEEECCcCCC---------CHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHH
Confidence 11011 112 223333321100 1356888999999865411 0
Q ss_pred -CEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 407 -DNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 407 -~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
..+-+-.+...|+++++++++.|+++++
T Consensus 407 ~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 407 NDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred hCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 1233333455799999999999998874
No 317
>PLN02509 cystathionine beta-lyase
Probab=99.50 E-value=5.5e-12 Score=124.44 Aligned_cols=211 Identities=16% Similarity=0.176 Sum_probs=128.6
Q ss_pred ChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh---hcccCCcc
Q 013204 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPA 152 (447)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~~ 152 (447)
.+...+++++++++. +.+.+++++||..|+..++.++ ..+++||+.++.|.+..... +...|...
T Consensus 132 npt~~aLE~~lA~le---g~e~ai~~~SG~aAi~~il~ll---------~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v 199 (464)
T PLN02509 132 NPTRDALESLLAKLD---KADRAFCFTSGMAALSAVTHLI---------KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVV 199 (464)
T ss_pred CHHHHHHHHHHHHHh---CCCEEEEeCcHHHHHHHHHHHh---------CCCCEEEEcCCchhhHHHHHHHHHHHCCeEE
Confidence 356788999998885 4557788899998876555432 33578999899987753111 11111110
Q ss_pred ccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHH
Q 013204 153 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 232 (447)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~ 232 (447)
..++.. +++++++.+. +++++|++|.+.+..|.+.+ +++|++
T Consensus 200 ------------~~vd~~------------------d~e~l~~ai~----~~TklV~lesPsNPtG~i~D----l~~I~~ 241 (464)
T PLN02509 200 ------------KRVNTT------------------NLDEVAAAIG----PQTKLVWLESPTNPRQQISD----IRKIAE 241 (464)
T ss_pred ------------EEeCCC------------------CHHHHHHhCC----cCCeEEEEECCCCCCCCHHH----HHHHHH
Confidence 111110 1256666553 34678888888777776654 999999
Q ss_pred HHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeee--cccCCCc-ccceeEEEeC-hhHHHHhhhccCCCCccCcC
Q 013204 233 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSA-YMPIGAILVS-PEVSEVIHSQSNTLGSFSHG 308 (447)
Q Consensus 233 l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~--sK~l~gg-~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 308 (447)
+|++||+++|+|+++. .+..+.+ .+...|++++ +|.++|. ..-.|+++++ +.+.+.+.... ..
T Consensus 242 lAk~~g~~lIVD~A~a-~~~~~~p-----l~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~-------~~ 308 (464)
T PLN02509 242 MAHAQGALVLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQ-------NS 308 (464)
T ss_pred HHHHcCCEEEEECCcc-ccccCCh-----hhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHH-------Hh
Confidence 9999999999999985 3232222 2234688764 6999873 2224566654 44444432110 00
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhc
Q 013204 309 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF 351 (447)
Q Consensus 309 ~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l 351 (447)
.....+|..++.++..|+.+. ...++..++.+++.+.|++.
T Consensus 309 ~g~~l~p~~A~l~lr~L~tL~--~R~~r~~~nA~~la~~L~~~ 349 (464)
T PLN02509 309 EGSGLAPFDCWLCLRGIKTMA--LRIEKQQENARKIAMYLSSH 349 (464)
T ss_pred cCCCcCHHHHHHHHhhhhhHH--HHHHHHHHHHHHHHHHHhcC
Confidence 112246777777777777553 34566667777777777654
No 318
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.50 E-value=4.1e-12 Score=125.32 Aligned_cols=158 Identities=20% Similarity=0.209 Sum_probs=106.1
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh---hcccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~ 151 (447)
..+...+|+++++++. +.+.+++++||+.|+..+++.+. ..+++||+..+.|++..... +...|..
T Consensus 61 ~~p~~~~le~~lA~l~---g~~~al~~~SG~~Ai~~al~all--------~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~ 129 (427)
T PRK05994 61 TNPTNAVLEERVAALE---GGTAALAVASGHAAQFLVFHTLL--------QPGDEFIAARKLYGGSINQFGHAFKSFGWQ 129 (427)
T ss_pred CCccHHHHHHHHHHHh---CCCcEEEEcCHHHHHHHHHHHHh--------CCCCEEEEecCcchhHHHHHHHHHHhcCcE
Confidence 3455778999999886 33468899999999999998664 33578999899998763211 1111110
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
+..++.. +.+++++.+. +++++|++|.+++..|.+.+ +++|.
T Consensus 130 ------------v~~vd~~------------------d~~~l~~ai~----~~tklV~vesp~NptG~v~d----l~~I~ 171 (427)
T PRK05994 130 ------------VRWADAD------------------DPASFERAIT----PRTKAIFIESIANPGGTVTD----IAAIA 171 (427)
T ss_pred ------------EEEECCC------------------CHHHHHHhcC----cCCeEEEEECCCCCCCeecC----HHHHH
Confidence 1112211 1366676664 35678888888888887776 99999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccceeEEEe
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILV 287 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~g~~~~ 287 (447)
++|++||+++|+|++++ .+. ........+|+++ ++|.++|.+-.+|.++.
T Consensus 172 ~la~~~gi~livD~a~a-~~~-----~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 172 EVAHRAGLPLIVDNTLA-SPY-----LIRPIEHGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred HHHHHcCCEEEEECCcc-ccc-----cCCccccCCcEEEEcCccccCCCCCcEEEEEE
Confidence 99999999999999986 211 1223345688876 56988873235665554
No 319
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.50 E-value=2.5e-12 Score=125.03 Aligned_cols=165 Identities=19% Similarity=0.233 Sum_probs=104.7
Q ss_pred ChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh---hcccCCcc
Q 013204 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPA 152 (447)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~~ 152 (447)
.+...++++++++++. .+.+++++||+.|+..++.++ ..+++||+.++.|.+..... ....|..
T Consensus 46 ~p~~~~le~~la~l~g---~~~~l~~~sG~~al~~~l~ll---------~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~- 112 (378)
T TIGR01329 46 NPTRTALESLLAKLDK---ADRAFAFSSGMAALDVITRLL---------NNGDEIIAGDDLYGGTDRLLTQVVPRSGVV- 112 (378)
T ss_pred ChHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHh---------CCCCEEEEcCCCchHHHHHHHHHHHHcCcE-
Confidence 3457789999998863 357888899999888766532 33467888888886653211 1111111
Q ss_pred ccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHH
Q 013204 153 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 232 (447)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~ 232 (447)
+..++.. +.+++++.+. +++++|++|.+.+..|.+.+ +++|.+
T Consensus 113 -----------v~~vd~~------------------d~~~le~~i~----~~tklv~le~psnptg~v~d----l~~I~~ 155 (378)
T TIGR01329 113 -----------VVHVDTT------------------DLDKVKAALG----PKTKLVLLESPTNPLQKIVD----IRKISE 155 (378)
T ss_pred -----------EEEeCCC------------------CHHHHHHhcC----cCceEEEEECCCCCCCeeec----HHHHHH
Confidence 1112211 1366776664 35678888887777777766 999999
Q ss_pred HHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeee--cccCCCc-ccceeEEEeC-hhHHHHhh
Q 013204 233 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSA-YMPIGAILVS-PEVSEVIH 296 (447)
Q Consensus 233 l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~--sK~l~gg-~~~~g~~~~~-~~~~~~~~ 296 (447)
+|++||+++|+|+++. .+....+ .....|++++ +|.++|+ ....|+++++ +++.+.+.
T Consensus 156 la~~~g~~vivD~a~~-~~~~~~~-----l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~ 217 (378)
T TIGR01329 156 MAHAQNALVVVDNTMM-SPLLCNP-----LELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVY 217 (378)
T ss_pred HHHHcCCEEEEECCCc-ccccCCh-----hhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHH
Confidence 9999999999999974 2211111 1224687765 5988873 2346778775 45545554
No 320
>PLN02263 serine decarboxylase
Probab=99.50 E-value=1.5e-10 Score=112.94 Aligned_cols=296 Identities=13% Similarity=0.061 Sum_probs=174.9
Q ss_pred ChHHHHHHHHHHHhcCcCC-CCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 76 TKPSLDLAKELLEMFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~-~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
.+...++.+++++++...+ ...-++++||||||..|+.++|.+. .+.+++.+..-|-+..-+...-|..
T Consensus 132 ~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~-------~~~vvy~S~~aH~Sv~KAa~llgi~--- 201 (470)
T PLN02263 132 RQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF-------PDGILYASRESHYSVFKAARMYRME--- 201 (470)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc-------CCcEEEEcCCccHHHHHHHHhcCCc---
Confidence 3445566677777764211 1257899999999999999998652 1346777778887765555444332
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
...++....++ .+.++|++.+.+.. ..+.+|+........|.+-| +++|.++|
T Consensus 202 ---------~~~Vp~d~~g~-------------mD~~aL~~aI~~d~-~~P~iVvataGTT~~GAiDp----i~eIa~i~ 254 (470)
T PLN02263 202 ---------CVKVDTLVSGE-------------IDCADFKAKLLANK-DKPAIINVNIGTTVKGAVDD----LDLVIKTL 254 (470)
T ss_pred ---------ceEeccCCCCc-------------CcHHHHHHHHHhCC-CCcEEEEEEecCCCCcCCCC----HHHHHHHH
Confidence 12233322111 22478888776432 23455555555555677766 99999999
Q ss_pred HhcCC-----EEEEehhhcCCCccccccccc--cC--CCCCCeeeec--ccCCCcccceeEEEeChhHHHHhhhccCCCC
Q 013204 235 KKYDI-----LFIADEVICAFGRLGTMFGCD--KY--SIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLG 303 (447)
Q Consensus 235 ~~~g~-----~li~DEv~~g~g~~g~~~~~~--~~--~~~~d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~ 303 (447)
++||+ +|++|-++.|+-. ++.-. .+ ....|-++++ |.++.+ ++.|+++.+++..+.+........
T Consensus 255 ~~~g~~~~~iwlHVDAA~GG~~l---Pf~~~~~~~df~~~vDSIsvD~HK~l~~P-~~cgvll~R~~~~~~~~~~~~Yl~ 330 (470)
T PLN02263 255 EECGFSQDRFYIHCDGALFGLMM---PFVKRAPKVTFKKPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLA 330 (470)
T ss_pred HHcCCccCCeeEEEeccchhhHh---hhcccccccCCCcCccEEEECCccccCCC-cCEEEEEEehhhHhhhccChHhhC
Confidence 99997 9999999987622 11100 01 1236667765 777777 699999998776554432211111
Q ss_pred ccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHH---HHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCC
Q 013204 304 SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQ---VNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEP 380 (447)
Q Consensus 304 ~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~---~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~ 380 (447)
....+...+.+.......+.+|+.+..+++.+. ..++.+++.+.|++. ++..........+.+ ..+.
T Consensus 331 ~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~---g~~~~~~p~s~~V~f--~~p~----- 400 (470)
T PLN02263 331 SRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA---GISAMLNELSSTVVF--ERPK----- 400 (470)
T ss_pred CCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC---CCeEEeCCCceEEEE--ecCc-----
Confidence 101011112222234556677776666665544 444666777777665 322223333333333 3221
Q ss_pred CCCCcchHHHHHHHHHHcCceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 381 FPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 381 ~~~~~~~~~~~~~~l~~~Gi~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
..+..+|..+...++.++++...-++.+.+|++++-|++..+
T Consensus 401 ------------~~~~~~gW~L~~~~~~~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 401 ------------DEEFVRRWQLACQGNIAHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred ------------hHHhhcceEEccCCCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 112346777766666677776665789999999999988776
No 321
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.49 E-value=3.6e-12 Score=125.54 Aligned_cols=158 Identities=18% Similarity=0.194 Sum_probs=103.9
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh---hcccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~ 151 (447)
..+....|++.++++. +.+.+++++||+.|+..++..+. ..+++|++..+.|++..... +...|..
T Consensus 62 ~~p~~~~Le~~lA~le---g~~~al~~~sG~~Ai~~al~~ll--------~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~ 130 (431)
T PRK08248 62 MNPTTDVFEKRIAALE---GGIGALAVSSGQAAITYSILNIA--------SAGDEIVSSSSLYGGTYNLFAHTLPKLGIT 130 (431)
T ss_pred CCchHHHHHHHHHHHh---CCCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEccCchhhHHHHHHHHHHhCCEE
Confidence 3455778999999886 34578999999999999997653 34578888888887753221 1111111
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
+..++.. +++++++.+. +++++|+++...+..|.+.+ +++|.
T Consensus 131 ------------v~~vd~~------------------d~e~l~~ai~----~~tklV~l~sp~NPtG~v~d----i~~I~ 172 (431)
T PRK08248 131 ------------VKFVDPS------------------DPENFEAAIT----DKTKALFAETIGNPKGDVLD----IEAVA 172 (431)
T ss_pred ------------EEEECCC------------------CHHHHHHhcC----CCCeEEEEECCCCCCCcccC----HHHHH
Confidence 1112211 1366776664 24667777776666777776 89999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccceeEEEe
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILV 287 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~g~~~~ 287 (447)
++|++||+++|+|++++ .+.. ........|+++ ++|.++|.+..+|+++.
T Consensus 173 ~la~~~gi~vIvD~t~a-~~~~-----~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 173 AIAHEHGIPLIVDNTFA-SPYL-----LRPIEHGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred HHHHHcCCEEEEeCCCC-cccc-----CChhHcCCCEEEEcCccccCCCCCceEEEEE
Confidence 99999999999999975 1111 111123468775 56999885567777665
No 322
>PLN02590 probable tyrosine decarboxylase
Probab=99.48 E-value=2.7e-10 Score=114.13 Aligned_cols=329 Identities=12% Similarity=0.067 Sum_probs=183.0
Q ss_pred hHHHHHHHHHHHhcCcCC------CCeEEEeCChhhHHHHHHHHHHHHHHh-cCCCCc-ceEEEEcCCCccchhhhhccc
Q 013204 77 KPSLDLAKELLEMFTASK------MAKVFFTNSGSEANDTQVKLVWYYNNA-LGRPNK-KKFIARQKSYHGSTLIAASLS 148 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~------~~~v~~~~sGseA~~~Al~~~~~~~~~-~~~~~~-~~vi~~~~~yhg~~~~~~~~~ 148 (447)
....++.+++++++.... ...-+|++|||+||..||.++|..... .|..+. +-+++.+...|-+..-+...-
T Consensus 170 ~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~il 249 (539)
T PLN02590 170 ELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIG 249 (539)
T ss_pred HHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHc
Confidence 344455566666663211 134688999999999999999865332 122222 335555666677765555444
Q ss_pred CCccccCCCCCCCCcceecCCCC--cccCCCCCCChhHHHHHHHHHHHHHHHhh--CCCcEEEEEEccccCCCCCccCCh
Q 013204 149 GLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPA 224 (447)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~a~vi~epv~~~~G~~~~~~ 224 (447)
|.. ...+..++.+. .++ .+.+.|++.+.+. ....+.+|+...-....|.+-|
T Consensus 250 Glg---------~~~vr~Vp~d~~~~~~-------------md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp-- 305 (539)
T PLN02590 250 GIH---------EENIRLLKTDSSTNYG-------------MPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP-- 305 (539)
T ss_pred CCC---------cccEEEEeCCCCCCCc-------------CCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC--
Confidence 321 11122333321 111 1147777777542 1233455565555555677766
Q ss_pred hHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCC-CCCeeeec--ccCCCcccceeEEEeChh--HHHHhhhcc
Q 013204 225 TYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSFA--KALSSAYMPIGAILVSPE--VSEVIHSQS 299 (447)
Q Consensus 225 ~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~-~~d~v~~s--K~l~gg~~~~g~~~~~~~--~~~~~~~~~ 299 (447)
|++|.++|++||++|++|-++.|+...-...-.-..|+ ..|-+++. |.+..+ ++.|+++.+.. +.+.+....
T Consensus 306 --l~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p-~~cg~llvr~~~~l~~a~~~~~ 382 (539)
T PLN02590 306 --LVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFAN-QTCSPLWVKDRYSLIDALKTNP 382 (539)
T ss_pred --HHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcC-cCEEEEEecCHHHHHHHhhcCH
Confidence 99999999999999999999987643222111112355 37888765 888777 68888888753 333332111
Q ss_pred CCCC----------ccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHH---HHHHHHHHhHhhccCCCceeeEeeeeeE
Q 013204 300 NTLG----------SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVN---KIAPKFQDGVKAFSDSPIIGEIRGTGLI 366 (447)
Q Consensus 300 ~~~~----------~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~---~~~~~l~~~L~~l~~~~~~~~~~~~g~~ 366 (447)
.... .+.+.+.-..-.+.....+.+|+.+..+++.+.++ ++.+++.+.|++.++..++.. ..-.+
T Consensus 383 ~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~--~~l~i 460 (539)
T PLN02590 383 EYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTT--RYFSL 460 (539)
T ss_pred HHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CceEE
Confidence 0000 00110111112345556667777766666554444 466667666665433333222 12223
Q ss_pred EEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee----C-CEEEEec-CCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 367 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----G-DNIMMSP-PFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 367 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----g-~~iR~~~-~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
+.+.+....... .....+...+.+++.+.|.+.... | ..+|++. +...+++||+.+++.|.+...++.
T Consensus 461 VcFr~~~~~~~~---~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~ 534 (539)
T PLN02590 461 VCFRLAPVDGDE---DQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFT 534 (539)
T ss_pred EEEEecCCCCCH---HHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 333333211000 001123456777888888664432 2 3489875 356789999999999998876654
No 323
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.47 E-value=1.7e-11 Score=119.73 Aligned_cols=166 Identities=17% Similarity=0.137 Sum_probs=103.4
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh---hcccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~ 151 (447)
..+...+++++++++.. .+..+.++||+.|+..++..+ ..+++||+.++.|++..... +...|..
T Consensus 52 ~~p~~~~le~~lA~l~g---~~~~v~~~sG~~ai~~~l~~l---------~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~ 119 (390)
T PRK08064 52 GNPTREALEDIIAELEG---GTKGFAFASGMAAISTAFLLL---------SKGDHVLISEDVYGGTYRMITEVLSRFGIE 119 (390)
T ss_pred CChhHHHHHHHHHHHhC---CCCeEEECCHHHHHHHHHHHh---------CCCCEEEEccCccchHHHHHHHHHHHcCCE
Confidence 34567788999998863 234566788999998888633 33578999899887754221 1111111
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
+..++.. +++++++.+. +++++|++|..++..|.+.+ +++|.
T Consensus 120 ------------v~~v~~~------------------d~~~l~~~l~----~~tklV~l~~p~NptG~~~d----l~~I~ 161 (390)
T PRK08064 120 ------------HTFVDMT------------------NLEEVAQNIK----PNTKLFYVETPSNPLLKVTD----IRGVV 161 (390)
T ss_pred ------------EEEECCC------------------CHHHHHHhcC----CCceEEEEECCCCCCcEecc----HHHHH
Confidence 1112211 0255666553 34567777777666676765 99999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcc-cceeEEEe-ChhHHHHhh
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILV-SPEVSEVIH 296 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~-~~~g~~~~-~~~~~~~~~ 296 (447)
++|+++|+++|+|++|..+ ....+ .....|+++ ++|.++|.. .-.|+++. ++++++.+.
T Consensus 162 ~la~~~g~~vvvD~a~~~~-~~~~~-----~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~ 224 (390)
T PRK08064 162 KLAKAIGCLTFVDNTFLTP-LLQKP-----LDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLY 224 (390)
T ss_pred HHHHHcCCEEEEECCCCcc-cccCc-----hhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHH
Confidence 9999999999999998632 11111 122357775 569887631 12455555 467777765
No 324
>PRK04311 selenocysteine synthase; Provisional
Probab=99.47 E-value=4.1e-10 Score=111.26 Aligned_cols=318 Identities=14% Similarity=0.137 Sum_probs=172.3
Q ss_pred CCHHHHHHHHHHHhcCCcc-cccC-cCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCc
Q 013204 50 SEPRLVAAATAQLNTLPFY-HSFW-NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 127 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~~~-~~~~-~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~ 127 (447)
-++++.+++.+.+..+... +... +...+....+++.+++++ +.+.+++++||+.|+..++..+ .++
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~---Gae~a~vv~sgtaAl~l~l~~l---------~~G 165 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT---GAEDALVVNNNAAAVLLALNAL---------AAG 165 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh---CCCeEEEECCHHHHHHHHHHHh---------CCC
Confidence 4689999999888754211 0110 112344567888888886 4457899999999999888653 234
Q ss_pred ceEEEEcCC-Cc-cchh---hhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCC
Q 013204 128 KKFIARQKS-YH-GSTL---IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP 202 (447)
Q Consensus 128 ~~vi~~~~~-yh-g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~ 202 (447)
++||+.++. || |.+. ..+...|.. +..++..+. . +++++++.+. +
T Consensus 166 deVIvs~~e~~~~ggs~~i~~~~~~~G~~------------l~~v~~~~~--------t-------~~~dle~aI~---~ 215 (464)
T PRK04311 166 KEVIVSRGELVEIGGAFRIPDVMRQAGAR------------LVEVGTTNR--------T-------HLRDYEQAIN---E 215 (464)
T ss_pred CEEEEcchhhhhcCcchhhHHHHHHCCcE------------EEEECCCCC--------C-------CHHHHHHhcC---c
Confidence 677776543 32 2111 111111211 011111100 0 1366777664 3
Q ss_pred CcEEEEEEcc-ccCC-CC--CccCChhHHHHHHHHHHhcCCEEEEehhhcCCCc---c---ccccccccCCCCCCeeeec
Q 013204 203 ETIAAFIAEP-VIGA-GG--VIPPPATYFEKVQAVVKKYDILFIADEVICAFGR---L---GTMFGCDKYSIKPDLVSFA 272 (447)
Q Consensus 203 ~~~a~vi~ep-v~~~-~G--~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~---~---g~~~~~~~~~~~~d~v~~s 272 (447)
++++|+++. .+.. .| ..++ +++|.++|++||+++|+|....-++- . +.+...+......|++++|
T Consensus 216 -~TklV~~vh~sN~~i~G~~~~~d----l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fS 290 (464)
T PRK04311 216 -NTALLLKVHTSNYRIEGFTKEVS----LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFS 290 (464)
T ss_pred -cCeEEEEEcCCCccccccCCcCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEec
Confidence 345555554 4432 34 2344 99999999999999999984211110 1 1111112222457999988
Q ss_pred --ccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh-hc-H------------HHH
Q 013204 273 --KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RN-I------------VEQ 336 (447)
Q Consensus 273 --K~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~-~------------~~~ 336 (447)
|.++|+ ..|++++++++++.+.... + .-.+...-+.+++..++|...-. .+ + .++
T Consensus 291 g~K~LgGp--~~G~i~g~~~li~~l~~~~-----~--~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~ 361 (464)
T PRK04311 291 GDKLLGGP--QAGIIVGKKELIARLKKHP-----L--KRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEE 361 (464)
T ss_pred CcccccCC--ceEEEEEcHHHHHHHhhch-----h--HHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHH
Confidence 888875 4788999999888775310 0 01111222333333444442211 10 1 145
Q ss_pred HHHHHHHHHHhHhhccCCCceeeE-e-----eeeeE-------EEEEeecCCCCCCCCCCCcchHHHHHHHHHH--cCce
Q 013204 337 VNKIAPKFQDGVKAFSDSPIIGEI-R-----GTGLI-------LGTEFADNKSPNEPFPPEWGIGAYFGAQCEK--HGML 401 (447)
Q Consensus 337 ~~~~~~~l~~~L~~l~~~~~~~~~-~-----~~g~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~Gi~ 401 (447)
..++.+.+.+.|+..........+ . |-|.+ +.+.+.... .....+.++|++ ..|+
T Consensus 362 ~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~----------~~~~~l~~~lr~~~~~i~ 431 (464)
T PRK04311 362 LRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKD----------RSLEALAARLRLLPPPVI 431 (464)
T ss_pred HHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCC----------CCHHHHHHHHhcCCCCEE
Confidence 555666777776654111111111 1 11111 122222111 014557777775 4577
Q ss_pred EEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 402 VRVSGDNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 402 ~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
.+...+.+.+-+. ...++|++.++++|.+.+.
T Consensus 432 ~r~~~~~~~ld~r-~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 432 GRIEDGRLLLDLR-TLEEEDEERLAAALLEALN 463 (464)
T ss_pred EEEECCEEEEEeC-cCCHHHHHHHHHHHHHHhh
Confidence 7766677888865 6788999999999988753
No 325
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.46 E-value=9.9e-11 Score=117.32 Aligned_cols=302 Identities=16% Similarity=0.122 Sum_probs=162.3
Q ss_pred eEEEeCChhhHHHHHHHHHHHHHHhc-CC----------------CCcceEEEEcCCCccchhhhhcccCCccccCCCCC
Q 013204 97 KVFFTNSGSEANDTQVKLVWYYNNAL-GR----------------PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDL 159 (447)
Q Consensus 97 ~v~~~~sGseA~~~Al~~~~~~~~~~-~~----------------~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 159 (447)
.-.|++|||+||..|+.++|...... +. ..++.+|+.+..-|-+..-+...-|..
T Consensus 161 ~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg-------- 232 (522)
T TIGR03799 161 LGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIG-------- 232 (522)
T ss_pred CeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCC--------
Confidence 36889999999999999998653211 00 012345666777777765443322221
Q ss_pred CCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhC--CCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhc
Q 013204 160 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY 237 (447)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~ 237 (447)
...+..+++...++ .++++|++.+.... ...+.+|+........|.+.| +++|.++|++|
T Consensus 233 -~~~v~~vp~d~~g~-------------~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDp----l~eIa~i~~~~ 294 (522)
T TIGR03799 233 -RDNLIAIKTDANNR-------------IDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDP----LDEMADIAQEL 294 (522)
T ss_pred -cccEEEEEeCCCCc-------------CCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCC----HHHHHHHHHHc
Confidence 01122333322211 12477877775421 122334444444556788888 99999999999
Q ss_pred CCEEEEehhhcCCCccccccccccCCC-CCCeeeec--ccCCCcccceeEEEeC-hhHHHHhhhccCCC---CccC-cCC
Q 013204 238 DILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSFA--KALSSAYMPIGAILVS-PEVSEVIHSQSNTL---GSFS-HGF 309 (447)
Q Consensus 238 g~~li~DEv~~g~g~~g~~~~~~~~~~-~~d~v~~s--K~l~gg~~~~g~~~~~-~~~~~~~~~~~~~~---~~~~-~~~ 309 (447)
|+++++|-+|.|....-..+-....++ ..|.++++ |.+.++ .++|+++.+ ++..+.+....... +... ...
T Consensus 295 g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P-~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~ 373 (522)
T TIGR03799 295 GCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVP-MGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSH 373 (522)
T ss_pred CCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcC-cccEEEEEeCHHHHHHhccCcchhcCCCCCccccc
Confidence 999999999875422111111112355 58999987 878877 688998876 45555543321110 0000 001
Q ss_pred CC--CCcHHHHHHHHHHHHHHhhhc---HHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCC----
Q 013204 310 TY--SGHPVSCAVAIEALKIYKERN---IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEP---- 380 (447)
Q Consensus 310 t~--~~~~~~~~aa~a~l~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~---- 380 (447)
++ +.+..+ ...+++++.+...+ +.++..++.+++.+.|++.++..++.. ..-.++.+.+.........
T Consensus 374 ~legsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~--p~l~iv~Fr~~p~~~~~~l~~~~ 450 (522)
T TIGR03799 374 TLEGSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTE--PELCLLTYRYVPEEVQQALAKAD 450 (522)
T ss_pred eeecCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecC--CCccEEEEEEeChhhcccccccc
Confidence 11 112222 23566777666544 455666677777777766543333321 1122333333211100000
Q ss_pred ---CC----CCcchHHHHHHHHHHcCceEEee---------C---CEEEEec-CCCCCHHHHHHHHHH
Q 013204 381 ---FP----PEWGIGAYFGAQCEKHGMLVRVS---------G---DNIMMSP-PFIMSPEEVDELISK 428 (447)
Q Consensus 381 ---~~----~~~~~~~~~~~~l~~~Gi~~~~~---------g---~~iR~~~-~~~~t~e~i~~~~~~ 428 (447)
.. ....+...+.+++.+.|...... | ..+|++. +...|+++|+.+++.
T Consensus 451 ~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 451 EEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 00 00123456777777788665431 1 2489875 345788888876653
No 326
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.46 E-value=9.1e-12 Score=108.11 Aligned_cols=276 Identities=15% Similarity=0.208 Sum_probs=158.7
Q ss_pred CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCc
Q 013204 93 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 172 (447)
Q Consensus 93 ~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
--.+.++...|..|.++..+|.. ..+|+++|+...|+|.=++..+.. .+.. +..++....
T Consensus 84 Lt~dnic~GvGsDE~ID~iiR~~-------c~PGkeKIl~cPPtysMY~v~A~i-Nd~e------------Vvkvpl~pd 143 (375)
T KOG0633|consen 84 LTSDNICVGVGSDELIDLIIRCV-------CDPGKEKILDCPPTYSMYVVDAAI-NDAE------------VVKVPLNPD 143 (375)
T ss_pred CCccceEEecCcHHHHHHHHhhe-------ecCCccceeecCCcceeEEEEeec-CCce------------EEEecCCCC
Confidence 34578999999999999999976 347889999999999555432221 1111 111221111
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCc
Q 013204 173 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 252 (447)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~ 252 (447)
|. .+ .+.+-+.+.. ...++++.+....+..|.+. ..+.++.|.+.-. +.++++||+|-.|
T Consensus 144 F~-----ln--------vdai~evl~~--ds~iK~~F~tSPgNPtg~~i-k~~di~KiLe~p~--nglVVvDEAYidF-- 203 (375)
T KOG0633|consen 144 FS-----LN--------VDAIAEVLEL--DSKIKCIFLTSPGNPTGSII-KEDDILKILEMPD--NGLVVVDEAYIDF-- 203 (375)
T ss_pred cc-----cc--------HHHHHHHHhc--cccceEEEEcCCCCCCcccc-cHHHHHHHHhCCC--CcEEEEeeeeEee--
Confidence 11 00 1334444443 12455555544444444444 4344544544333 7899999999877
Q ss_pred cccccccccCCCCCCee---eecccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh
Q 013204 253 LGTMFGCDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK 329 (447)
Q Consensus 253 ~g~~~~~~~~~~~~d~v---~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~ 329 (447)
.|......+..--|+++ |+||++|-.+.++|+.+.+.++++.++... .++..+..+..+|++++..-.
T Consensus 204 sg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~K---------aPYNiS~~~s~~AL~Als~~n 274 (375)
T KOG0633|consen 204 SGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAK---------APYNISVAGSVAALAALSDSN 274 (375)
T ss_pred ccccccchHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHhcc---------CCccccchhHHHHHHhcCccc
Confidence 33222222222237766 589988875699999999999988887422 244444555666666664211
Q ss_pred ---hhcHHHHHHHHHHHHHHhHhhccCCCceeeEe--eeeeEEEEEeecCCCCCCCCCCCcchHHHH-HHHHHHcCceEE
Q 013204 330 ---ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR--GTGLILGTEFADNKSPNEPFPPEWGIGAYF-GAQCEKHGMLVR 403 (447)
Q Consensus 330 ---~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~--~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gi~~~ 403 (447)
-+.....+-+.+.++-..|.++ +.+.... ....|+.+++.+... .++..+ .+.+.+.|+.++
T Consensus 275 ~kkme~~rdaiv~er~RL~keLt~v---~~~~~~~gg~daNFiLi~v~~~~n---------~~akkly~q~at~~gVvVR 342 (375)
T KOG0633|consen 275 GKKMEDVRDAIVRERERLFKELTEV---PFLNDYPGGSDANFILIEVTGGDN---------GMAKKLYKQDATKMGVVVR 342 (375)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcC---ccccCCCCcccccEEEEEEcCCCc---------HHHHHHHHHHHHhcceEEE
Confidence 1222333333334444445544 3222211 223455566553321 123333 445567899998
Q ss_pred eeC------CEEEEecCCCCCHHHHHHHHHHHHHH
Q 013204 404 VSG------DNIMMSPPFIMSPEEVDELISKYGKA 432 (447)
Q Consensus 404 ~~g------~~iR~~~~~~~t~e~i~~~~~~l~~~ 432 (447)
..| +.+|++ ..|+|+-+.+++.|+..
T Consensus 343 frgse~~c~G~lRit---vGt~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 343 FRGSEEGCKGYLRIT---VGTPEENTVLMKCLKQF 374 (375)
T ss_pred EcCCccccceeEEEE---cCCcccchHHHHHHHhh
Confidence 654 569999 77899999999998865
No 327
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.46 E-value=6.2e-12 Score=122.19 Aligned_cols=169 Identities=15% Similarity=0.126 Sum_probs=103.8
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
..+...+|+++++++. +.+..++++||+.|+..++.++ ..+++||+.++.|++.........
T Consensus 48 ~~p~~~~Le~~la~l~---g~~~al~~~SG~~Al~~~l~~l---------~pGd~Vi~~~~~y~~t~~~~~~~~------ 109 (380)
T PRK06176 48 GNPTRFALEELIADLE---GGVKGFAFASGLAGIHAVFSLF---------QSGDHVLLGDDVYGGTFRLFDKVL------ 109 (380)
T ss_pred CChhHHHHHHHHHHHh---CCCCEEEECCHHHHHHHHHHHc---------CCCCEEEEcCCChhHHHHHHHHHH------
Confidence 4455778999999885 3445788899999998666432 234788888888876632111100
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
...+.. +..++.. +++++++.+. +++++|++|...+..|.+.+ +++|.++|
T Consensus 110 ~~~gi~---v~~vd~~------------------d~e~l~~ai~----~~t~lV~lesP~Nptg~~~d----i~~I~~la 160 (380)
T PRK06176 110 VKNGLS---CTIIDTS------------------DLSQIKKAIK----PNTKALYLETPSNPLLKITD----LAQCASVA 160 (380)
T ss_pred HhcCeE---EEEcCCC------------------CHHHHHHhcC----cCceEEEEECCCCCCceecC----HHHHHHHH
Confidence 000100 1111111 1366666654 35677777777666666665 99999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCeeee--cccCCCccc-ceeEEEeC-hhHHHHhh
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYM-PIGAILVS-PEVSEVIH 296 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~--sK~l~gg~~-~~g~~~~~-~~~~~~~~ 296 (447)
++||+++|+|++++.. ..+.+ .+...|++++ +|.++|..- -.|+++.+ +++.+.+.
T Consensus 161 ~~~gi~vivD~t~a~~-~~~~p-----~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~ 220 (380)
T PRK06176 161 KDHGLLTIVDNTFATP-YYQNP-----LLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIA 220 (380)
T ss_pred HHcCCEEEEECCcccc-ccCCc-----cccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHH
Confidence 9999999999998732 22222 2334688765 498876321 24556664 55655554
No 328
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.46 E-value=7.5e-11 Score=103.10 Aligned_cols=332 Identities=20% Similarity=0.272 Sum_probs=199.5
Q ss_pred CCHHHHHHHHHHHhcCC---cc-cc-cCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCC
Q 013204 50 SEPRLVAAATAQLNTLP---FY-HS-FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR 124 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~---~~-~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~ 124 (447)
-.++.++|+.+.-+-+. +. .. .-.-..++..++.+.+.+.+ +.|.+.++++.-+|-.+++..+.
T Consensus 29 Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl---g~D~~R~t~GARe~KfavMhal~-------- 97 (382)
T COG1103 29 LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL---GMDEVRVTAGAREAKFAVMHALC-------- 97 (382)
T ss_pred CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh---CCceeeecccchhhHHHHHHHhc--------
Confidence 46777777776554311 11 01 11124567778888888886 78899999999999999888763
Q ss_pred CCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCc
Q 013204 125 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET 204 (447)
Q Consensus 125 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~ 204 (447)
++...++.+...|=+++.+....|.....- ....+|.+ ..+.+.|. +-+++...+ ..+.
T Consensus 98 -~~gd~vV~D~~aHYttyvAAEragl~v~eV---------p~tg~Pey------~i~~e~y~----~viee~~~~-~g~~ 156 (382)
T COG1103 98 -KEGDWVVVDSLAHYTTYVAAERAGLNVAEV---------PNTGYPEY------KITPEGYA----EVIEEVKDE-GGDP 156 (382)
T ss_pred -cCCCEEEEcCcchHHHHHHHHhcCCeEEec---------CCCCCCce------EecHHHHH----HHHHHHHhc-cCCC
Confidence 345678889999988887776555433210 11112221 11223332 333443332 3356
Q ss_pred EEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCCCcccce
Q 013204 205 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPI 282 (447)
Q Consensus 205 ~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~gg~~~~ 282 (447)
+++.++..+.++.|++.. .+.++++|++||++++..-+|+ .||.. .+...+.+|+++-| |+|+.. .|+
T Consensus 157 ~~lallTh~Dg~YGNl~D----akkva~ic~e~gvPlllN~AYt-~Grmp----vs~ke~g~DFiVgSGHKsmAAs-~Pi 226 (382)
T COG1103 157 PALALLTHVDGEYGNLAD----AKKVAKICREYGVPLLLNCAYT-VGRMP----VSGKEIGADFIVGSGHKSMAAS-API 226 (382)
T ss_pred ceEEEEeccCCCcCCchh----hHHHHHHHHHcCCceEeeccee-ecccc----ccccccCCCEEEecCccchhcc-CCe
Confidence 888899999999998876 8999999999999999999888 66653 34445779999877 799887 599
Q ss_pred eEEEeChhHHHHhhhccCC---CCcc-CcCCCCCCcHHHHHHHHHHHHHH-hh-hcHHHHHHHHHHHHHHhHhhccCCCc
Q 013204 283 GAILVSPEVSEVIHSQSNT---LGSF-SHGFTYSGHPVSCAVAIEALKIY-KE-RNIVEQVNKIAPKFQDGVKAFSDSPI 356 (447)
Q Consensus 283 g~~~~~~~~~~~~~~~~~~---~~~~-~~~~t~~~~~~~~~aa~a~l~~~-~~-~~~~~~~~~~~~~l~~~L~~l~~~~~ 356 (447)
|++..+.++.+.+...+.+ ..-. ..+-|.-+.|+. ...|++-.+ ++ ..+-+.+ +..+++.+.|+++.+...
T Consensus 227 Gvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapiv--TlmASfP~V~eRVkrWdeEv-~kaR~fv~elEkigg~~q 303 (382)
T COG1103 227 GVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIV--TLMASFPHVVERVKRWDEEV-EKARWFVAELEKIGGVKQ 303 (382)
T ss_pred eEEeehhHHHHHHHhhcccccccceeeeecccccCchHH--HHHhcCHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhHHH
Confidence 9999999998776543311 0101 112233333332 122222211 12 1222332 345566666665521111
Q ss_pred eeeE-eeeeeEEEEEee---c--CCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC--CEEEEecCCCCCHHHHHHHHHH
Q 013204 357 IGEI-RGTGLILGTEFA---D--NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELISK 428 (447)
Q Consensus 357 ~~~~-~~~g~~~~i~~~---~--~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g--~~iR~~~~~~~t~e~i~~~~~~ 428 (447)
.+.- +...++ .++.+ + .+... ..-.+.+.|.++||+-...| ..+.++. +..+.|+++..+++
T Consensus 304 lG~rPk~HdLm-~Fetp~f~eIakk~~r--------~gyFlY~ELK~RgI~GI~~G~Tk~~K~sv-yGl~~Eqve~V~~a 373 (382)
T COG1103 304 LGERPKNHDLM-KFETPVFHEIAKKHKR--------KGYFLYEELKKRGIHGIQPGQTKYFKLSV-YGLSWEQVEYVVDA 373 (382)
T ss_pred hCCCCccccee-eecCchHHHHHHhCcC--------CceeeHHHHHhcCccccccCceeEEEEEe-ecCCHHHHHHHHHH
Confidence 1110 011111 11111 0 01011 12247888999999865554 4577774 67899999999999
Q ss_pred HHHHHHHH
Q 013204 429 YGKALKAT 436 (447)
Q Consensus 429 l~~~l~~~ 436 (447)
+++.+++.
T Consensus 374 fkeI~eky 381 (382)
T COG1103 374 FKEIAEKY 381 (382)
T ss_pred HHHHHHhc
Confidence 99988763
No 329
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.45 E-value=4.1e-12 Score=109.23 Aligned_cols=167 Identities=20% Similarity=0.262 Sum_probs=109.7
Q ss_pred HHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCC
Q 013204 79 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD 158 (447)
Q Consensus 79 ~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 158 (447)
..++.+.+++.+. .+.+++++++||++|+..+++.++ ..+++|++..+.|++.........+...
T Consensus 2 ~~~~~~~l~~~~~-~~~~~~~~~~~~t~a~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~~~~~g~~~------ 66 (170)
T cd01494 2 LEELEEKLARLLQ-PGNDKAVFVPSGTGANEAALLALL--------GPGDEVIVDANGHGSRYWVAAELAGAKP------ 66 (170)
T ss_pred HHHHHHHHHHHcC-CCCCcEEEeCCcHHHHHHHHHHhC--------CCCCEEEEeecccceehhhHHHhcCCEE------
Confidence 3567788888874 456689999999999999999874 2246789989898887532222222111
Q ss_pred CCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcC
Q 013204 159 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 238 (447)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g 238 (447)
..++..... .. . .+.+.+++ .....+++++++++.++.+|...+ +++|.++|+++|
T Consensus 67 ------~~v~~~~~~------~~--~---~~~~~~~~---~~~~~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~ 122 (170)
T cd01494 67 ------VPVPVDDAG------YG--G---LDVAILEE---LKAKPNVALIVITPNTTSGGVLVP----LKEIRKIAKEYG 122 (170)
T ss_pred ------EEeccCCCC------cc--c---hhhhhhhh---ccccCceEEEEEecCcCCCCeEcC----HHHHHHHHHHcC
Confidence 111111100 00 0 00012222 222457889999999888887766 699999999999
Q ss_pred CEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCCCcccceeEEEeC
Q 013204 239 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILVS 288 (447)
Q Consensus 239 ~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~gg~~~~g~~~~~ 288 (447)
+++|+|+++.++...... .......+|+++.| |.+++ .++|+++++
T Consensus 123 ~~li~D~a~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~~~--~~~G~l~~~ 170 (170)
T cd01494 123 ILLLVDAASAGGASPAPG--VLIPEGGADVVTFSLHKNLGG--EGGGVVIVK 170 (170)
T ss_pred CEEEEecccccccccccc--cccccccCCEEEEEcccccCC--CceEEEEeC
Confidence 999999999866443212 12223458998877 99987 588888764
No 330
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.45 E-value=1.6e-11 Score=120.68 Aligned_cols=161 Identities=15% Similarity=0.139 Sum_probs=101.6
Q ss_pred ChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccC
Q 013204 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 155 (447)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 155 (447)
.+...+|++.++++. +.+.+++++||+.|+..++.... ..+++||+....|.+........- .
T Consensus 68 ~p~~~~Le~~lA~l~---g~~~av~~sSG~aAi~~al~all--------~~Gd~Vv~~~~~y~~t~~~~~~~l------~ 130 (436)
T PRK07812 68 NPTQDVVEQRIAALE---GGVAALLLASGQAAETFAILNLA--------GAGDHIVSSPRLYGGTYNLFHYTL------P 130 (436)
T ss_pred CchHHHHHHHHHHHh---CCCeEEEEccHHHHHHHHHHHHh--------CCCCEEEEeCCcchHHHHHHHHHh------h
Confidence 455678999999886 44568999999999999997553 334778887777755432111100 0
Q ss_pred CCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHH
Q 013204 156 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 235 (447)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~ 235 (447)
..+. .+..++-+. +++++++.+. +++++|++|.+.+..|.+.+ +++|.++|+
T Consensus 131 ~~Gi---~v~~vdd~~-----------------d~e~l~~ai~----~~tklV~ie~~sNp~G~v~D----l~~I~~la~ 182 (436)
T PRK07812 131 KLGI---EVSFVEDPD-----------------DLDAWRAAVR----PNTKAFFAETISNPQIDVLD----IPGVAEVAH 182 (436)
T ss_pred cCeE---EEEEECCCC-----------------CHHHHHHhCC----CCCeEEEEECCCCCCCeecC----HHHHHHHHH
Confidence 0010 011111000 1356666554 35678999998888888887 999999999
Q ss_pred hcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccceeEEEe
Q 013204 236 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILV 287 (447)
Q Consensus 236 ~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~g~~~~ 287 (447)
+||+++|+|+++. .+.. ........|+++ ++|.++|.+--+|.++.
T Consensus 183 ~~gi~liVD~t~a-~~~~-----~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 183 EAGVPLIVDNTIA-TPYL-----IRPLEHGADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred HcCCEEEEECCCc-cccc-----CCchhcCCCEEEEecccccCCCCCeEEEEEE
Confidence 9999999999875 2211 111223468775 56988763233555554
No 331
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.44 E-value=5.8e-10 Score=109.94 Aligned_cols=310 Identities=16% Similarity=0.155 Sum_probs=166.5
Q ss_pred CCHHHHHHHHHHHhcCCcc-ccc-CcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCc
Q 013204 50 SEPRLVAAATAQLNTLPFY-HSF-WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 127 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~~~-~~~-~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~ 127 (447)
-++++.+++.+.+..+... +.. .+........+++.+++++ +.+.+++++||+.|+..++..+ ..+
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~---gae~alvv~sg~aAi~l~l~~l---------~~G 160 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELT---GAEDALVVNNNAAAVLLALNTL---------AKG 160 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHh---CCCcEEEECCHHHHHHHHHHHh---------CCc
Confidence 5799999999988764211 111 0112345677888888886 3445778899999998888543 334
Q ss_pred ceEEEEcCC---Cccchhh--hhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCC
Q 013204 128 KKFIARQKS---YHGSTLI--AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP 202 (447)
Q Consensus 128 ~~vi~~~~~---yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~ 202 (447)
++||+.++. |.|.... .+...|... ..++..+ . .+++++++.+. +
T Consensus 161 deVIvs~~e~v~~ggs~~i~~~~~~~G~~~------------~~v~~~~--------~-------~~l~dle~aI~---~ 210 (454)
T TIGR00474 161 KEVIVSRGELVEIGGSFRIPDVMEQSGAKL------------VEVGTTN--------R-------THLKDYEDAIT---E 210 (454)
T ss_pred CEEEECCChhhhhcchhhHHHHHHHcCCEE------------EEeCCCC--------C-------CCHHHHHHhcC---c
Confidence 677776554 3333111 111122111 1111100 0 01366666664 3
Q ss_pred CcEEEEEEccc-cCC-CC--CccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc---------ccccccCCCCCCee
Q 013204 203 ETIAAFIAEPV-IGA-GG--VIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT---------MFGCDKYSIKPDLV 269 (447)
Q Consensus 203 ~~~a~vi~epv-~~~-~G--~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~---------~~~~~~~~~~~d~v 269 (447)
++++|+++.. +.. .| ..++ +++|.++|++||+++|+|.. +|..+. +...+......|++
T Consensus 211 -~T~lv~~~h~sN~~~~G~~~~~d----l~~I~~la~~~g~~vivD~~---sG~l~~~~~~gl~~~p~~~~~~~~GaDiv 282 (454)
T TIGR00474 211 -NTALLLKVHTSNYRIVGFTEEVS----IAELVALGREHGLPVMEDLG---SGSLVDLSRYGLPDEPTVQEVIAAGVDLV 282 (454)
T ss_pred -CCEEEEEEccCcccccCCCCCCC----HHHHHHHHHHcCCeEEEECC---CcccccchhccCCCCcccccHhHcCCCEE
Confidence 3455554444 432 35 3455 99999999999999999953 332221 11112223457999
Q ss_pred eec--ccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhc--H------------
Q 013204 270 SFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN--I------------ 333 (447)
Q Consensus 270 ~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~--~------------ 333 (447)
++| |.++|+ ..|++++++++++.+... .+. -..-..-+.+++..+++...-.+. +
T Consensus 283 ~fSg~K~LgGp--~~G~i~g~~~~i~~l~~~-----~l~--r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~ 353 (454)
T TIGR00474 283 TFSGDKLLGGP--QAGIIVGKKELIERLKKN-----PLT--RALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQS 353 (454)
T ss_pred EecCccccCCC--eEEEEEECHHHHHhhhhc-----hhH--HHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccC
Confidence 998 999875 478899999988776531 100 011112223333334443221111 1
Q ss_pred HHHHHHHHHHHHHhHhhccCCCceeeE-e-----eeeeE-------EEEEeecCCCCCCCCCCCcchHHHHHHHHHHcC-
Q 013204 334 VEQVNKIAPKFQDGVKAFSDSPIIGEI-R-----GTGLI-------LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG- 399 (447)
Q Consensus 334 ~~~~~~~~~~l~~~L~~l~~~~~~~~~-~-----~~g~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G- 399 (447)
.++..++...+.+.|+++...++...+ . |-|.+ +.+.+.... .-...+.++|++..
T Consensus 354 ~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~----------~~~~~l~~~lr~~~~ 423 (454)
T TIGR00474 354 PEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDG----------LSAEKLEARLRELPP 423 (454)
T ss_pred HHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCC----------CCHHHHHHHHhcCCC
Confidence 135555666666767653111111111 1 11111 122222111 01455777777544
Q ss_pred -ceEEeeCCEEEEecCCCCCHHHHHHHHHHH
Q 013204 400 -MLVRVSGDNIMMSPPFIMSPEEVDELISKY 429 (447)
Q Consensus 400 -i~~~~~g~~iR~~~~~~~t~e~i~~~~~~l 429 (447)
|+.+...+.+.+-+. +..++|++.++++|
T Consensus 424 ~ii~r~~~~~~~ld~r-~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 424 PIIGRIEDDRFLLDLR-TLLEDEEELLIEAL 453 (454)
T ss_pred CEEEEEECCEEEEEeC-cCCHHHHHHHHHHh
Confidence 677666677888765 66888888888776
No 332
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.44 E-value=1.9e-11 Score=118.75 Aligned_cols=232 Identities=18% Similarity=0.175 Sum_probs=131.7
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhc---ccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS---LSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~---~~~~~ 151 (447)
..+...+|++.++++. +.+..++++||+.|+..++.++ ..+++||+.++.|.+....... ..|..
T Consensus 48 ~~p~~~~Le~~lA~l~---g~~~~~~~~sG~aai~~~~~~l---------~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~ 115 (377)
T PRK07671 48 GNPTRAALEELIAVLE---GGHAGFAFGSGMAAITAVMMLF---------SSGDHVILTDDVYGGTYRVMTKVLNRFGIE 115 (377)
T ss_pred CChHHHHHHHHHHHHh---CCCceEEeCCHHHHHHHHHHHh---------CCCCEEEECCCccchHHHHHHHHHhcCCeE
Confidence 4566788999999886 3345677888998887665432 2347899999988765322111 11111
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
+..++.. +.+++++.+. + ++++|++|..++..|...+ +++|.
T Consensus 116 ------------v~~v~~~------------------d~~~l~~ai~---~-~tklV~le~P~NPtg~~~d----l~~I~ 157 (377)
T PRK07671 116 ------------HTFVDTS------------------NLEEVEEAIR---P-NTKAIYVETPTNPLLKITD----IKKIS 157 (377)
T ss_pred ------------EEEECCC------------------CHHHHHHhcC---C-CCeEEEEECCCCCCCcccC----HHHHH
Confidence 1111110 1366666664 2 4567777766666666655 99999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcc-cceeEEEe-ChhHHHHhhhccCCCCccCc
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILV-SPEVSEVIHSQSNTLGSFSH 307 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~-~~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 307 (447)
++|+++|+++|+||++... ..+.+ .....|+++ ++|.++|.. .-.|+++. ++++++.+... ..
T Consensus 158 ~la~~~g~~lvvD~a~~~~-~~~~p-----~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~-------~~ 224 (377)
T PRK07671 158 TIAKEKGLLTIVDNTFMTP-YWQSP-----ISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFV-------QN 224 (377)
T ss_pred HHHHHcCCEEEEECCCCcc-ccCCh-----hhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHH-------HH
Confidence 9999999999999998631 22222 123357775 569998631 12344555 56677766531 11
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-----CCcee----------eEeeeeeEEEEEe
Q 013204 308 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEF 371 (447)
Q Consensus 308 ~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~~~~~g~~~~i~~ 371 (447)
......+|..+..++..++.+.. ..++..++...+.+.|++.+. +|... ...|.|.++.+++
T Consensus 225 ~~g~~~~~~~a~l~~~~l~tl~~--R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~ 301 (377)
T PRK07671 225 STGGILGPQDSWLLLRGLKTLGI--RMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV 301 (377)
T ss_pred hhcCCCCHHHHHHHHcCcChHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe
Confidence 11223345555544444433221 234555566666666654321 12111 1235677888887
No 333
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.44 E-value=2.5e-11 Score=117.45 Aligned_cols=235 Identities=12% Similarity=0.074 Sum_probs=134.5
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh---hcccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~ 151 (447)
.++....|++.++.+- .+ +..++++||++|+..++.... ..+++||+.++.|.++.... +..-|..
T Consensus 62 gnPt~~~Le~~la~le--~~-~~~v~~sSG~aAi~~~l~all--------~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~ 130 (395)
T PRK05967 62 GTPTTDALCKAIDALE--GS-AGTILVPSGLAAVTVPFLGFL--------SPGDHALIVDSVYYPTRHFCDTMLKRLGVE 130 (395)
T ss_pred CChHHHHHHHHHHHHh--CC-CCEEEECcHHHHHHHHHHHhc--------CCCCEEEEccCCcHHHHHHHHHHHHhcCeE
Confidence 4556777888888773 23 345677779999999987553 34578999999998875321 1111110
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
+..++..+ .+.+++.+. +++++|++|...+..+.+.+ +++|+
T Consensus 131 ------------v~~vd~~~------------------~e~l~~al~----~~TklV~lesPsNP~l~v~d----l~~I~ 172 (395)
T PRK05967 131 ------------VEYYDPEI------------------GAGIAKLMR----PNTKVVHTEAPGSNTFEMQD----IPAIA 172 (395)
T ss_pred ------------EEEeCCCC------------------HHHHHHhcC----cCceEEEEECCCCCCCcHHH----HHHHH
Confidence 11111100 145666664 34678888865555544444 99999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCC-cccceeEEEeChhHHHHhhhccCCCCccCcC
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILVSPEVSEVIHSQSNTLGSFSHG 308 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~g-g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (447)
++|+++|+++|+|+++... ..+.....-.|+++ .+|.++| +-.-+|+++.+++..+.+... ...
T Consensus 173 ~la~~~g~~vvVD~t~a~p------~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~-------~~~ 239 (395)
T PRK05967 173 EAAHRHGAIVMMDNTWATP------LYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEA-------HGT 239 (395)
T ss_pred HHHHHhCCEEEEECCccCc------eecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHH-------HHH
Confidence 9999999999999998632 11222223467775 5698877 224456667777765555321 111
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-----CCcee----------eEeeeeeEEEEEeec
Q 013204 309 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFAD 373 (447)
Q Consensus 309 ~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~~~~~g~~~~i~~~~ 373 (447)
.....+|..+...+..++-+. -..++..++...+.+.|++-+. +|... ...|.|.++.+++..
T Consensus 240 ~G~~~~p~da~l~~rgl~Tl~--lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~ 317 (395)
T PRK05967 240 LGLCAGPDDTYQILRGLRTMG--IRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAA 317 (395)
T ss_pred cCCCCCHHHHHHHHcCcccHH--HHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC
Confidence 112345666554444443221 1123444455555555554311 22110 123568888888863
No 334
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.43 E-value=7.9e-11 Score=115.08 Aligned_cols=299 Identities=15% Similarity=0.153 Sum_probs=162.2
Q ss_pred HHHHHHHHHHHhcCcCCCCeEEEeCChh-hHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCC
Q 013204 78 PSLDLAKELLEMFTASKMAKVFFTNSGS-EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK 156 (447)
Q Consensus 78 ~~~~l~~~l~~~~~~~~~~~v~~~~sGs-eA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 156 (447)
...++++.+++++.-.....++++++|| .++..++..++.. ..+.+.||+.... |-++..++...|....
T Consensus 106 l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~-----~~~gd~VI~p~~t-h~S~~kAi~~~G~~pv--- 176 (444)
T TIGR03531 106 LTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHK-----RPKAKYVIWPRID-QKSCIKAISTAGFEPR--- 176 (444)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCc-----CCCCCEEEEECcC-hHHHHHHHHHcCCeEE---
Confidence 4456667777775322234789999999 6888887765311 1124567776655 6666665555543211
Q ss_pred CCCCCCcceecCC---CCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHH
Q 013204 157 FDLPAPFVLHTDC---PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 233 (447)
Q Consensus 157 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l 233 (447)
.++. ++.+. .++++|++.+....++.+.+|+..|..+..|...+ +++|.++
T Consensus 177 ---------~Vd~~~d~~~~~-------------iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd----L~eIa~l 230 (444)
T TIGR03531 177 ---------VIETVLDGDELT-------------TDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD----IEEIAKI 230 (444)
T ss_pred ---------EeeeeecCcCCC-------------cCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC----HHHHHHH
Confidence 1111 01111 11488888887543356777777776443333333 9999999
Q ss_pred HHhcCCEEEEehhhcCCCcccccccc--ccCCC-CCCeeee--cccCCCcccceeEEEe-ChhHHHHhhhccCCCCccCc
Q 013204 234 VKKYDILFIADEVICAFGRLGTMFGC--DKYSI-KPDLVSF--AKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSH 307 (447)
Q Consensus 234 ~~~~g~~li~DEv~~g~g~~g~~~~~--~~~~~-~~d~v~~--sK~l~gg~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 307 (447)
|++||+++|+|++|. ++.. ..... .-... ..|++++ .|.+..++ ..|+++. ++++++.+... ..
T Consensus 231 a~k~gI~lIvDaAyg-~~~~-~~~~~~~~g~~~Grad~vv~s~hK~l~~pg-~Gg~I~~~d~el~~~i~~~-------y~ 300 (444)
T TIGR03531 231 CANYDIPHIVNNAYG-LQSN-KYMELINKAIKVGRVDAVVSSTDKNFMVPV-GGAIIYSFDENFIQEISKS-------YP 300 (444)
T ss_pred HHHcCCEEEEECcCc-CcCh-hhhhhhhccccccCCCeEEEeCccCCCCCC-CEEEEEECCHHHHHHHHHh-------cc
Confidence 999999999999996 3211 00000 11112 3577765 48776532 2355556 67788877632 11
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHhHhhc-cCCC-ceeeEeeeeeEEEEEeecCCCCCCCCC
Q 013204 308 GFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFP 382 (447)
Q Consensus 308 ~~t~~~~~~~~~aa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~ 382 (447)
+ ..... .++.+..+.+. +.. +++.++..++.+++.+.|+++ .+++ .+...+..-.-+++.+..-. .
T Consensus 301 g-~~~~s-~~~~~~~~ll~-~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~-~----- 371 (444)
T TIGR03531 301 G-RASAS-PSLDVLITLLS-LGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK-G----- 371 (444)
T ss_pred C-CCCCh-HHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc-c-----
Confidence 1 11212 23333333332 222 445666777888888888887 3333 22222222222233333211 0
Q ss_pred CCcchHHHHHHHHHHcCceE----Eee-----C----------------CEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 383 PEWGIGAYFGAQCEKHGMLV----RVS-----G----------------DNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 383 ~~~~~~~~~~~~l~~~Gi~~----~~~-----g----------------~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
.....+...|..++|-- .++ + .++-+...+.++++|||.++++|++++
T Consensus 372 ---~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 372 ---KDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred ---cCHHHHHHHHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 01345677777776521 111 0 123333445689999999999999863
No 335
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.42 E-value=3.5e-11 Score=118.51 Aligned_cols=160 Identities=17% Similarity=0.166 Sum_probs=103.5
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhc-ccCCccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS-LSGLPAL 153 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~-~~~~~~~ 153 (447)
..+...++++.++++. +.+.+++++||++|+..++.... ..+++||+....|++....... ..
T Consensus 62 ~~p~~~~le~~lA~l~---g~~~av~~sSGt~Al~~al~~ll--------~~Gd~Vi~~~~~y~~t~~~~~~~l~----- 125 (433)
T PRK08134 62 SNPTVAVLEERVAALE---GGVGAIATASGQAALHLAIATLM--------GAGSHIVASSALYGGSHNLLHYTLR----- 125 (433)
T ss_pred cChHHHHHHHHHHHHh---CCCcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEeCCccHHHHHHHHHHHh-----
Confidence 3456788999999886 23357999999999999988653 2347888888888765322111 00
Q ss_pred cCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHH
Q 013204 154 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 233 (447)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l 233 (447)
.++. .+..++.. +.+++++.+. +++++|+++.+.+..|.+++ +++|.++
T Consensus 126 --~~Gi---~v~~vd~~------------------d~~~l~~~i~----~~TklV~~e~~~np~g~v~D----i~~I~~l 174 (433)
T PRK08134 126 --RFGI---ETTFVKPG------------------DIDGWRAAIR----PNTRLLFGETLGNPGLEVLD----IPTVAAI 174 (433)
T ss_pred --hCCe---EEEEECCC------------------CHHHHHHhcC----CCCeEEEEECCCcccCcccC----HHHHHHH
Confidence 0010 01122211 1367777765 35678888888777787777 9999999
Q ss_pred HHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCCCcccceeEEEe
Q 013204 234 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILV 287 (447)
Q Consensus 234 ~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~gg~~~~g~~~~ 287 (447)
|++||+++|+|.+|+ .+.. ........|++++| |.++|.+--+|.++.
T Consensus 175 a~~~gi~livD~t~a-~~~~-----~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 175 AHEAGVPLLVDSTFT-TPYL-----LRPFEHGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred HHHcCCEEEEECCCc-cccc-----CCchhcCCCEEEeccccccCCCCCceEEEEE
Confidence 999999999999985 2221 11123457888765 877763233444443
No 336
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.42 E-value=2.9e-10 Score=110.31 Aligned_cols=310 Identities=15% Similarity=0.184 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEE
Q 013204 52 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 131 (447)
Q Consensus 52 p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi 131 (447)
.+..+++.+.++..... ...+...++++++++++ +.+.++.++||+.|+..|++++ |-.++++||
T Consensus 5 ~e~~~~v~~~l~s~~~~-----~~g~~~~~fE~~~a~~~---g~~~~~~~~sgt~Al~~al~~l-------~~~~gdeVi 69 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLS-----TYGPYVEEFEKEFAEYF---GVKYAVAVSSGTSALHLALRAL-------GLGPGDEVI 69 (363)
T ss_dssp HHHHHHHHHHHHHTCCS-----SSSHHHHHHHHHHHHHH---TSSEEEEESSHHHHHHHHHHHT-------TGGTTSEEE
T ss_pred HHHHHHHHHHHHhCCcc-----CCCHHHHHHHHHHHHHh---CCCeEEEeCChhHHHHHHHHhc-------CCCcCceEe
Confidence 35566677777654221 12567889999999998 5679999999999999999985 323458899
Q ss_pred EEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEE
Q 013204 132 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIA 210 (447)
Q Consensus 132 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~ 210 (447)
+..-+|..........+..+.+ +|.. +.+ ..+++++++.+. +.+++|++
T Consensus 70 ~p~~t~~~~~~ai~~~G~~pv~-------------~Di~~~~~-------------~id~~~~~~~i~----~~t~ai~~ 119 (363)
T PF01041_consen 70 VPAYTFPATASAILWAGAEPVF-------------VDIDPETL-------------NIDPEALEKAIT----PKTKAILV 119 (363)
T ss_dssp EESSS-THHHHHHHHTT-EEEE-------------E-BETTTS-------------SB-HHHHHHHHH----TTEEEEEE
T ss_pred cCCCcchHHHHHHHHhccEEEE-------------EeccCCcC-------------CcCHHHHHHHhc----cCccEEEE
Confidence 8887887776555554443332 1211 110 112478888887 35577777
Q ss_pred ccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec----ccCCCcccceeEEE
Q 013204 211 EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAIL 286 (447)
Q Consensus 211 epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s----K~l~gg~~~~g~~~ 286 (447)
-...|. ... +++|.++|++||++||-|-+|+ +|-. +.-...|-.-|+.+|| |.++.| -.|+++
T Consensus 120 ~h~~G~---~~d----~~~i~~~~~~~~i~lIeD~a~a-~g~~---~~g~~~G~~gd~~~fSf~~~K~i~~g--eGG~v~ 186 (363)
T PF01041_consen 120 VHLFGN---PAD----MDAIRAIARKHGIPLIEDAAQA-FGAR---YKGRPVGSFGDIAIFSFHPTKIITTG--EGGAVV 186 (363)
T ss_dssp E-GGGB----------HHHHHHHHHHTT-EEEEE-TTT-TT-E---ETTEETTSSSSEEEEESSTTSSS-SS--S-EEEE
T ss_pred ecCCCC---ccc----HHHHHHHHHHcCCcEEEccccc-cCce---eCCEeccCCCCceEecCCCCCCCcCC--CCeeEE
Confidence 776653 333 9999999999999999999998 4321 1112233345888876 887654 235666
Q ss_pred eC-hhHHHHhhhccCCC------CccC----cCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCC
Q 013204 287 VS-PEVSEVIHSQSNTL------GSFS----HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSP 355 (447)
Q Consensus 287 ~~-~~~~~~~~~~~~~~------~~~~----~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~ 355 (447)
.+ +++.+.++.-.... ..+. .+..+-.+.+.++.+++-|+.+ ++..+..+++.+++++.|..+....
T Consensus 187 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L--~~~~~~R~~~a~~y~~~L~~~~~~~ 264 (363)
T PF01041_consen 187 TNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRL--DEIIARRRENAQRYREALAGIPGIK 264 (363)
T ss_dssp ESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHTTGTTEE
T ss_pred ecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhcCCCcc
Confidence 65 56666654321111 0111 2234455677766666666644 4445666777778888887763211
Q ss_pred cee---eEe-eeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-------------------------
Q 013204 356 IIG---EIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------------------------- 406 (447)
Q Consensus 356 ~~~---~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g------------------------- 406 (447)
.+. ... .....+.+.+.+... . ....+.+.|.++||-+.+..
T Consensus 265 ~~~~~~~~~~~~~~~f~i~~~~~~~-~--------~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae 335 (363)
T PF01041_consen 265 PPPIPDGAERSSYYRFPIRLPDEAL-A--------DRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAE 335 (363)
T ss_dssp EEGCGTTTEEBCESSEEEEETCCGC-S--------THHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHH
T ss_pred ccccccccccccccccccccccccc-c--------hHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHH
Confidence 111 111 111122333332211 0 14568899999999877421
Q ss_pred ----CEEEEecCCCCCHHHHHHHHHHHH
Q 013204 407 ----DNIMMSPPFIMSPEEVDELISKYG 430 (447)
Q Consensus 407 ----~~iR~~~~~~~t~e~i~~~~~~l~ 430 (447)
..+.+-.+...++++++++++.|+
T Consensus 336 ~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 336 RLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp HHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred HHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 245666667789999999988874
No 337
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.42 E-value=3.9e-11 Score=117.39 Aligned_cols=235 Identities=14% Similarity=0.176 Sum_probs=138.6
Q ss_pred ChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh---hcccCCcc
Q 013204 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPA 152 (447)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~~ 152 (447)
.+...+|++.++++. +.+.++.++||+.|+..++..+. ..+++||+..+.|.+..... +..-|..
T Consensus 60 nPtv~~lE~~la~le---g~~~av~~~SG~aAi~~al~all--------~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~- 127 (432)
T PRK06702 60 NPTLAAFEQKLAELE---GGVGAVATASGQAAIMLAVLNIC--------SSGDHLLCSSTVYGGTFNLFGVSLRKLGID- 127 (432)
T ss_pred CcHHHHHHHHHHHHh---CCCcEEEECCHHHHHHHHHHHhc--------CCCCEEEECCCchHHHHHHHHHHHHHCCCE-
Confidence 355778999999885 33468899999999999998553 34578999999997764321 1111111
Q ss_pred ccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHH
Q 013204 153 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 232 (447)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~ 232 (447)
+..++.. .+++++++++. + ++++|++|...+..+.++. +++|++
T Consensus 128 -----------v~~vd~~-----------------~d~~~l~~~I~---~-~Tk~I~~e~pgnP~~~v~D----i~~I~~ 171 (432)
T PRK06702 128 -----------VTFFNPN-----------------LTADEIVALAN---D-KTKLVYAESLGNPAMNVLN----FKEFSD 171 (432)
T ss_pred -----------EEEECCC-----------------CCHHHHHHhCC---c-CCeEEEEEcCCCccccccC----HHHHHH
Confidence 1112210 01266777775 3 4567777776555555555 999999
Q ss_pred HHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccceeEEEe-Chh----------HHH------
Q 013204 233 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILV-SPE----------VSE------ 293 (447)
Q Consensus 233 l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~g~~~~-~~~----------~~~------ 293 (447)
+|++||+++|+|+++. .+..++-+..-+|+++ ++|-++|..--+|.++. ... +.+
T Consensus 172 iA~~~gi~livD~T~~------tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~ 245 (432)
T PRK06702 172 AAKELEVPFIVDNTLA------TPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYH 245 (432)
T ss_pred HHHHcCCEEEEECCCC------chhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCccccccccccccccccccc
Confidence 9999999999999863 1333443344477775 67977763233343332 211 110
Q ss_pred ---------------HhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-----
Q 013204 294 ---------------VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD----- 353 (447)
Q Consensus 294 ---------------~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~----- 353 (447)
.... ..........+|+.+..++..|+-+ +-..++..++...+.+.|++.+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~sp~~a~l~~rgL~Tl--~lR~~r~~~Na~~la~~L~~~p~V~~V~ 317 (432)
T PRK06702 246 GVSYVQNFGAAAYIVKARV------QLLRDYGNCMSPFNAYISNIGLETL--HLRMERHSENALAVAKWLADHERIEWVN 317 (432)
T ss_pred ccchhhccchhhHHHHHHH------HHHHHccCCCCHHHHHHHHhccCcH--HHHHHHHHHHHHHHHHHHHhCCCcceEE
Confidence 0000 0011123466788777666666533 23345556777777777775422
Q ss_pred CCceee----------E-eeeeeEEEEEee
Q 013204 354 SPIIGE----------I-RGTGLILGTEFA 372 (447)
Q Consensus 354 ~~~~~~----------~-~~~g~~~~i~~~ 372 (447)
+|.... . .|.|.++.+++.
T Consensus 318 yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~ 347 (432)
T PRK06702 318 YPGLDSNENYSLAQKYLKKGASGVLTFGIK 347 (432)
T ss_pred CCCCCCCccHHHHHHhCcCCCceEEEEEec
Confidence 221111 1 356788888886
No 338
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.41 E-value=5.9e-10 Score=105.73 Aligned_cols=314 Identities=17% Similarity=0.151 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEE
Q 013204 52 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 131 (447)
Q Consensus 52 p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi 131 (447)
.+..+++.+.+..+... .-+...++++++++.+ +...++.++|||.|+..|++.+- -..++.||
T Consensus 15 ~~e~~~v~~vl~sg~i~------~G~~v~~FE~~~ae~~---G~k~ava~~sgT~AL~laL~al~-------ig~GDeVI 78 (374)
T COG0399 15 EEELAAVQEVLKSGWLT------GGPFVRRFEQAFAEYL---GVKYAVAVSSGTAALHLALLALA-------IGPGDEVI 78 (374)
T ss_pred hHHHHHHHHHHHcCCee------cChHHHHHHHHHHHHh---CCCeEEEecChHHHHHHHHHhcC-------CCCCCEEE
Confidence 35566677777664432 2345778999999886 66789999999999999999542 13457888
Q ss_pred EEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEc
Q 013204 132 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAE 211 (447)
Q Consensus 132 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~e 211 (447)
+..-+|-.+....+..+..|.+ +|+... .+. .+.+.+|+.+. + ++++||.=
T Consensus 79 ~ps~TfvATan~i~~~Ga~PVF-------------vDid~~-----------T~n-id~~~ie~aIt---~-~tKAIipV 129 (374)
T COG0399 79 VPSFTFVATANAVLLVGAKPVF-------------VDIDPD-----------TLN-IDPDLIEAAIT---P-RTKAIIPV 129 (374)
T ss_pred ecCCchHHHHHHHHHcCCeEEE-------------EecCCc-----------ccC-CCHHHHHHHcc---c-CCeEEEEe
Confidence 8777776665555554444432 222110 000 12477888776 2 35566654
Q ss_pred cccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec----ccCCCcccceeEEEe
Q 013204 212 PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAILV 287 (447)
Q Consensus 212 pv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s----K~l~gg~~~~g~~~~ 287 (447)
...| ..+. ++.|.++|++||+++|-|-+|+ +|-.= --...|---|+.+|| |.|+.| -.|.++.
T Consensus 130 hl~G---~~~d----m~~i~~la~~~~l~vIEDaAqa-~Ga~y---~gk~vGt~Gd~~~fSF~~~K~ittg--EGGav~t 196 (374)
T COG0399 130 HLAG---QPCD----MDAIMALAKRHGLPVIEDAAQA-HGATY---KGKKVGSFGDIGAFSFHATKNLTTG--EGGAVVT 196 (374)
T ss_pred hhcc---CCCC----HHHHHHHHHHcCCeEEEEcchh-ccCee---cCcccccccceEEEEecCCCCcccc--CceEEEe
Confidence 4443 2333 9999999999999999999997 54321 112223345777776 888764 2245555
Q ss_pred -ChhHHHHhhhccCCCC---------ccCcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCce
Q 013204 288 -SPEVSEVIHSQSNTLG---------SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPII 357 (447)
Q Consensus 288 -~~~~~~~~~~~~~~~~---------~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~ 357 (447)
++++.+.++.-..+-. ....+..+-.+-+.++.+++-|+. -+++.++.+++.+...+.|+++.....+
T Consensus 197 nd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~--l~~~~~~R~~~a~~Y~~~l~~~~~~~~p 274 (374)
T COG0399 197 NDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLER--LDEINERRREIAQIYAEALKGLPGITLP 274 (374)
T ss_pred CCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhhcCCCcccc
Confidence 5667766654211100 111122222233444444444443 3556677777788888888876332222
Q ss_pred eeEeee-eeE--EEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCce----EEee--------------C----------
Q 013204 358 GEIRGT-GLI--LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGML----VRVS--------------G---------- 406 (447)
Q Consensus 358 ~~~~~~-g~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~----~~~~--------------g---------- 406 (447)
....+. ..+ ..+.+..... ....+...|.++||- ..|. +
T Consensus 275 ~~~~~~~~~~~~~~i~~~~~~~----------~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~ 344 (374)
T COG0399 275 PEPDGAVHAWHLYTILVDEEGI----------SRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSE 344 (374)
T ss_pred CCCCCceeeeeeeEEEecCCCC----------CHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhh
Confidence 111111 111 1222232211 145577888888554 2321 0
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 407 DNIMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 407 ~~iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
..+.+-.....++++++++++.|++++.+
T Consensus 345 r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 345 RILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred CeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 34677666778999999999999998753
No 339
>PRK05939 hypothetical protein; Provisional
Probab=99.40 E-value=4.8e-11 Score=116.51 Aligned_cols=159 Identities=13% Similarity=0.164 Sum_probs=104.2
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchh--hhhcccCCcc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL--IAASLSGLPA 152 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~--~~~~~~~~~~ 152 (447)
..+...+++++++++. +.+..+.++||+.|+..++..+. ..+++||+.++.|.++.. ..+...|..
T Consensus 45 g~p~~~~lE~~la~le---g~~~~v~~ssG~~Ai~~~l~all--------~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~- 112 (397)
T PRK05939 45 GTPTTAALEAKITKME---GGVGTVCFATGMAAIAAVFLTLL--------RAGDHLVSSQFLFGNTNSLFGTLRGLGVE- 112 (397)
T ss_pred CCHHHHHHHHHHHHHh---CCCeEEEeCCHHHHHHHHHHHHc--------CCCCEEEECCCccccHHHHHHHHHhcCCE-
Confidence 3456778999999885 33457778889999999987653 334788888877755421 111111111
Q ss_pred ccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHH
Q 013204 153 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 232 (447)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~ 232 (447)
+..++.. +.+++++.+. +++++|++|.+.+..|.+.+ +++|.+
T Consensus 113 -----------v~~v~~~------------------d~e~l~~~l~----~~tklV~vesp~NptG~v~d----l~~I~~ 155 (397)
T PRK05939 113 -----------VTMVDAT------------------DVQNVAAAIR----PNTRMVFVETIANPGTQVAD----LAGIGA 155 (397)
T ss_pred -----------EEEECCC------------------CHHHHHHhCC----CCCeEEEEECCCCCCCCHHh----HHHHHH
Confidence 1112211 1366777664 35678888888777777755 999999
Q ss_pred HHHhcCCEEEEehhhcCCCccccccccccCCCCCCee--eecccCCCcccceeEEEeC
Q 013204 233 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVS 288 (447)
Q Consensus 233 l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v--~~sK~l~gg~~~~g~~~~~ 288 (447)
+|++||+++|+|++|... ..++......|++ +++|.++|.+..+|+++..
T Consensus 156 la~~~gi~livD~t~a~~------~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 156 LCRERGLLYVVDNTMTSP------WLFRPKDVGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred HHHHcCCEEEEECCcccc------cccCccccCCEEEEecCeecccCCCCeEEEEEec
Confidence 999999999999998521 1122222346766 4679999855788887664
No 340
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.40 E-value=8.4e-12 Score=117.47 Aligned_cols=229 Identities=17% Similarity=0.200 Sum_probs=125.7
Q ss_pred CCChHHHHHHHHHHHhcCcCCCCeEEE-eCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCC-c
Q 013204 74 RTTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-P 151 (447)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~~~~~~~v~~-~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~-~ 151 (447)
.+.....+.++.+++++. .++++| ++|+++++..++..+. .++++|++..++| .+...++...|. +
T Consensus 56 ~~~g~i~~~~~~~A~~~g---a~~~~~~~~Gst~a~~~~l~al~--------~~gd~Vlv~~~~h-~s~~~~~~~~g~~~ 123 (294)
T cd00615 56 DPTGPIKEAQELAARAFG---AKHTFFLVNGTSSSNKAVILAVC--------GPGDKILIDRNCH-KSVINGLVLSGAVP 123 (294)
T ss_pred CCChHHHHHHHHHHHHhC---CCCEEEEcCcHHHHHHHHHHHcC--------CCCCEEEEeCCch-HHHHHHHHHCCCEE
Confidence 356677888888888873 334555 8888899999887653 3346777766554 444334333332 2
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
.+.... ....+. .. ...+.+++++.+... ++..++++..| + ..|...+ +++|.
T Consensus 124 ~~v~~~-----------~~~~~~--~~-------~~i~~~~l~~~l~~~-~~~k~v~l~~p-~-~~G~~~d----l~~I~ 176 (294)
T cd00615 124 VYLKPE-----------RNPYYG--IA-------GGIPPETFKKALIEH-PDAKAAVITNP-T-YYGICYN----LRKIV 176 (294)
T ss_pred EEecCc-----------cCcccC--cC-------CCCCHHHHHHHHHhC-CCceEEEEECC-C-CCCEecC----HHHHH
Confidence 111000 000000 00 011147788777542 22334455545 3 3566665 99999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccce-eEEEeChhH--HHHhhhccCCCCccC
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSPEV--SEVIHSQSNTLGSFS 306 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~-g~~~~~~~~--~~~~~~~~~~~~~~~ 306 (447)
++|++||+++|+||+|......+............|+++ ++|.++| ++. |++..+.+. .+.+.. .+.
T Consensus 177 ~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~div~~S~hK~l~g--~~~~~~l~~~~~~~~~~~~~~------~~~ 248 (294)
T cd00615 177 EEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGADIVVQSTHKTLPA--LTQGSMIHVKGDLVNPDRVNE------ALN 248 (294)
T ss_pred HHHHhcCCeEEEECcchhhhccCcccCcchhhcCCcEEEEchhcccch--HhHHHHHHhCCCcCCHHHHHH------HHH
Confidence 999999999999999863211111111111123467775 5698865 343 344344331 222221 111
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHhHh
Q 013204 307 HGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVK 349 (447)
Q Consensus 307 ~~~t~~~~~~~~~aa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~ 349 (447)
...+.+++.+.+++..++++.+.. +++.++..++.+.+++.|+
T Consensus 249 ~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 249 LHQSTSPSYLILASLDVARAMMALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred HHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 123445666666666667766543 3456677777777777664
No 341
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.39 E-value=1.7e-09 Score=100.98 Aligned_cols=292 Identities=15% Similarity=0.185 Sum_probs=174.3
Q ss_pred CeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccC
Q 013204 96 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY 175 (447)
Q Consensus 96 ~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (447)
-.++.++|.+.+.+.+++++. ...+.|++=+.+|.+..... ...| +..+|++..
T Consensus 125 wdiiit~G~t~~l~~~l~~~~--------N~gd~vlie~~ty~~AL~s~-~a~g--------------v~~ipv~md--- 178 (472)
T KOG0634|consen 125 WDIIITNGNTDGLFKVLRTLI--------NRGDHVLIEEYTYPSALQSM-EALG--------------VKIIPVKMD--- 178 (472)
T ss_pred ceEEEecCCchHHHHHHHHhh--------cCCCceEEecccchHHHHhc-cccC--------------ceEEecccc---
Confidence 389999999999999999886 44578888777775442111 1111 112222111
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhhCCC-----cEEEEEEcc-ccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcC
Q 013204 176 AHPGETEEEYSTRLANNLEDLILKEGPE-----TIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 249 (447)
Q Consensus 176 ~~~~~~~~~~~~~~~~~le~~l~~~~~~-----~~a~vi~ep-v~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g 249 (447)
-++. +.+.|++.+.+.++. ...++-.-| -|+.+|.. .+.+--++|.+|+|+|++++|-||+|-
T Consensus 179 -~~Gi--------~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~t-ls~errk~iy~LArKyDfLIVeDdpYy- 247 (472)
T KOG0634|consen 179 -QDGI--------DPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNT-LSLERRKKIYQLARKYDFLIVEDDPYY- 247 (472)
T ss_pred -CCCC--------CHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCc-cCHHHHHHHHHHHHHcCEEEEecCccc-
Confidence 0111 138888888765432 233344444 46666654 467888999999999999999999986
Q ss_pred CCcccc--------ccccc-----------cCCCC--CCe---eeecccCCCcccceeEEEeChhHHHHhhhccCCCCcc
Q 013204 250 FGRLGT--------MFGCD-----------KYSIK--PDL---VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF 305 (447)
Q Consensus 250 ~g~~g~--------~~~~~-----------~~~~~--~d~---v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~ 305 (447)
|-..+. .-++. ...+. -.+ -+|||-++-| +|+|++.+++-+++.+...
T Consensus 248 ~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPG-lRlG~it~~~~~l~ril~~------- 319 (472)
T KOG0634|consen 248 FLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPG-LRLGWITGNSLFLKRILDL------- 319 (472)
T ss_pred eeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCc-ceeEEeecCHHHHHHHhhh-------
Confidence 323221 00011 11111 112 2799999877 8999999999887776532
Q ss_pred CcCCCCCCcHHHHHHHHHHHHHHhhhcHHHHHHH-------HHHHHHHhHhhc-cCCCceeeEeeeeeEEEEEeecCC-C
Q 013204 306 SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNK-------IAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNK-S 376 (447)
Q Consensus 306 ~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~-------~~~~l~~~L~~l-~~~~~~~~~~~~g~~~~i~~~~~~-~ 376 (447)
....|.+++.+++....+.|+...++++++.+.+ +...+...|.+- +..-.....+..|.++++.++-.. .
T Consensus 320 ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~ 399 (472)
T KOG0634|consen 320 AEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFD 399 (472)
T ss_pred cceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccc
Confidence 2334555666777777777776666544433333 333333444332 222122223445777777775110 0
Q ss_pred CCCCCCCCcchHHHHHHHHHHcCceEEeeC-----------C-EEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 377 PNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----------D-NIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-----------~-~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
.+..++ ...+.+...+.++||.+..+. . .+|++.++ .+.|++++++++|..++++.
T Consensus 400 ~~~~i~---q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~-a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 400 TKKSIN---QIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAF-AEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred cccchH---HHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeec-CCHHHHHHHHHHHHHHHHHH
Confidence 111111 123345667789999987541 2 58888664 57779999999999999874
No 342
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.38 E-value=4.8e-11 Score=115.37 Aligned_cols=238 Identities=13% Similarity=0.126 Sum_probs=142.0
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
.++-...|+++++++- +-+.+++++||+.|+..++...+ ..+++||+....|.+....... ..
T Consensus 60 ~nPt~~~le~~la~LE---g~~~a~~~~SGmaAi~~~~~~ll--------~~GD~Vv~~~~~Yg~t~~l~~~------~l 122 (395)
T PRK08114 60 GTLTHFSLQEAMCELE---GGAGCALYPCGAAAVANAILAFV--------EQGDHVLMTGTAYEPTQDFCSK------IL 122 (395)
T ss_pred CChhHHHHHHHHHHHh---CCCeEEEEhHHHHHHHHHHHHHc--------CCCCEEEEeCCCcHHHHHHHHH------HH
Confidence 3455777889998873 44578899999999999887553 3346788877788766432210 00
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
+.+++. +..++..+ .+++++.+. +++++|.+|.+.+..|.+.+ +++|+++|
T Consensus 123 ~~~Gi~---v~~vd~~d------------------~~~l~~~l~----~~TrlV~~EtpsNp~~~v~D----I~~Ia~ia 173 (395)
T PRK08114 123 SKLGVT---TTWFDPLI------------------GADIAKLIQ----PNTKVVFLESPGSITMEVHD----VPAIVAAV 173 (395)
T ss_pred HhcCcE---EEEECCCC------------------HHHHHHhcC----CCceEEEEECCCCCCCEeec----HHHHHHHH
Confidence 011111 11111100 256777664 35789999999888888887 99999999
Q ss_pred HhcC--CEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCCCcc-cceeEEEeChhHHHHhhhccCCCCccCcCC
Q 013204 235 KKYD--ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAY-MPIGAILVSPEVSEVIHSQSNTLGSFSHGF 309 (447)
Q Consensus 235 ~~~g--~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~gg~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (447)
+++| +++++|.+++ . | ..++-..+-.|+++.| |.++|.. ...|+++.++++.+.+.... ...+
T Consensus 174 ~~~g~g~~lvVDnT~a-~---p--~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~-----~~~G- 241 (395)
T PRK08114 174 RSVNPDAVIMIDNTWA-A---G--VLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENS-----YLMG- 241 (395)
T ss_pred HHhCCCCEEEEECCCc-c---c--cccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHH-----Hhcc-
Confidence 9985 9999999986 2 1 1234444558988764 9888742 35566677777655554210 0111
Q ss_pred CCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhcc-----CCCcee----------eEeeeeeEEEEEeec
Q 013204 310 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD 373 (447)
Q Consensus 310 t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~~~~~g~~~~i~~~~ 373 (447)
...+|..+.-.+..|+-+. -..++..++...+.+.|++-+ .+|... ...+.|.++.+++..
T Consensus 242 -~~~~p~~a~l~~rgl~TL~--lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~ 317 (395)
T PRK08114 242 -QMVDADTAYMTSRGLRTLG--VRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKK 317 (395)
T ss_pred -CCCCHHHHHHHHcCCCcHH--HHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecC
Confidence 2345655554444443221 123444555555666665431 112110 123568888888863
No 343
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.33 E-value=5e-09 Score=97.18 Aligned_cols=332 Identities=19% Similarity=0.177 Sum_probs=183.2
Q ss_pred CCHHHHHHHHHHHhc-CCccc---ccCcC--CChHHHHHH-HHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhc
Q 013204 50 SEPRLVAAATAQLNT-LPFYH---SFWNR--TTKPSLDLA-KELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL 122 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~-~~~~~---~~~~~--~~~~~~~l~-~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~ 122 (447)
..|.|.+|+...+.+ +.-++ ++.++ ..+...+++ ++.+++|. .+...|- -.||+.||.++...+.
T Consensus 38 ~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFg-a~~anVQ-PhSGs~AN~av~~All------ 109 (413)
T COG0112 38 TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFG-AEYANVQ-PHSGSQANQAVYLALL------ 109 (413)
T ss_pred CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhC-CCccccC-CCCchHHHHHHHHHHc------
Confidence 568999988776644 22111 11121 233444444 34444542 2222222 2489999999998764
Q ss_pred CCCCcceEEEEcCCCccc-hhh-hhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhh
Q 013204 123 GRPNKKKFIARQKSYHGS-TLI-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE 200 (447)
Q Consensus 123 ~~~~~~~vi~~~~~yhg~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~ 200 (447)
.+.++|+.++-+.=|+ +.+ ..+.+| ..+..++++-. . +....+.++++++....
T Consensus 110 --~pGDtimgm~l~~GGHltHg~~v~~sG------------~~~~~v~Y~vd----~------et~~IDyD~~~k~a~e~ 165 (413)
T COG0112 110 --QPGDTIMGLDLSHGGHLTHGSPVNFSG------------KLFNVVSYGVD----P------ETGLIDYDEVEKLAKEV 165 (413)
T ss_pred --CCCCeEecccCCCCCcccCCCCCCccc------------eeEEeEecccc----c------ccCccCHHHHHHHHHHh
Confidence 4468888876444333 111 111121 11222222211 0 11122358888888876
Q ss_pred CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc-CCCccccccccccCCCCCCeeeec--ccCCC
Q 013204 201 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA--KALSS 277 (447)
Q Consensus 201 ~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~-g~g~~g~~~~~~~~~~~~d~v~~s--K~l~g 277 (447)
+| +.||.=.+ ..+-.--+++++++|++.|++|.+|-+|- |+-..| .++..=-..|+||-+ |.|-|
T Consensus 166 kP---K~ii~G~S------aY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G---~~p~P~~~AdvVTtTTHKTlrG 233 (413)
T COG0112 166 KP---KLIIAGGS------AYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGG---VHPNPLPHADVVTTTTHKTLRG 233 (413)
T ss_pred CC---CEEEECcc------ccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcc---cCCCCCCccceEeCCcccCCCC
Confidence 66 34444221 22222238999999999999999998875 442222 122111127888765 89988
Q ss_pred cccceeEEEeCh-hHHHHhhhccCCCCccCcCCCCCCcHH-HHHHHHHHHHHHhhhc---HHHHHHHHHHHHHHhHhhcc
Q 013204 278 AYMPIGAILVSP-EVSEVIHSQSNTLGSFSHGFTYSGHPV-SCAVAIEALKIYKERN---IVEQVNKIAPKFQDGVKAFS 352 (447)
Q Consensus 278 g~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~-~~~aa~a~l~~~~~~~---~~~~~~~~~~~l~~~L~~l~ 352 (447)
.+-|.++++. ++.+.+... ...+ ..+++.+ .+++-..+++...+++ ...++.++.+.|.+.|.+.
T Consensus 234 --PrGG~Il~~~eel~kkin~a------VFPg-~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~- 303 (413)
T COG0112 234 --PRGGIILTNDEELAKKINSA------VFPG-LQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER- 303 (413)
T ss_pred --CCceEEEeccHHHHHHhhhh------cCCc-cCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-
Confidence 5788888885 788888642 2211 2222222 3333333444444444 4566777778888888764
Q ss_pred CCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEE----ee-------CCEEEEecCC----CC
Q 013204 353 DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VS-------GDNIMMSPPF----IM 417 (447)
Q Consensus 353 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~-------g~~iR~~~~~----~~ 417 (447)
++.++..-+ ...++.+++..... ........|.+-||.+- |+ .+.||+..|. .+
T Consensus 304 G~~vvsGgT-dnHl~lVDl~~~~~----------~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~ 372 (413)
T COG0112 304 GFKVVSGGT-DNHLVLVDLRSKGL----------TGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGF 372 (413)
T ss_pred CCeEecCCc-cceEEEEEcccCCC----------CHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCC
Confidence 444443211 12344566663211 13345556667788765 22 1569998774 35
Q ss_pred CHHHHHHHHHHHHHHHH-------HHHHHHHHhhhc
Q 013204 418 SPEEVDELISKYGKALK-------ATEERVKELKSQ 446 (447)
Q Consensus 418 t~e~i~~~~~~l~~~l~-------~~~~~~~~~~~~ 446 (447)
.++|+.++.+.+.+++. +++++...++++
T Consensus 373 ~e~e~~~Ia~~I~~vl~~~~~~~~~vk~~V~~l~~~ 408 (413)
T COG0112 373 GEAEMEEIADLIADVLDGLKDVPAEVKEEVAELCRR 408 (413)
T ss_pred CHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHh
Confidence 78888888888888775 456666666654
No 344
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.32 E-value=5.7e-09 Score=99.95 Aligned_cols=357 Identities=15% Similarity=0.130 Sum_probs=190.9
Q ss_pred CCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHH
Q 013204 30 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 109 (447)
Q Consensus 30 ~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~ 109 (447)
.....|+|+.|-.++. --.++..+||.. +.-.+ +-++...+|++..++++ +++.++++.+|..++.
T Consensus 38 ~s~dV~IDLrSDTgT~---apS~~m~aAM~~----GDD~Y----~gdpSv~~Lee~vael~---G~E~alpthqGRgaE~ 103 (467)
T TIGR02617 38 DSEDVFIDLLTDSGTG---AVTQSMQAAMMR----GDEAY----SGSRSYYALAESVKNIF---GYQYTIPTHQGRGAEQ 103 (467)
T ss_pred CCCCeEEECccCCCCC---CCCHHHHHHHHc----CCccc----ccCchHHHHHHHHHHHh---CCceEEECCCCchHHH
Confidence 3456789999887652 124677777765 21111 13445678999999997 7778999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcceEE------EEcCCCccch-hhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCCh
Q 013204 110 TQVKLVWYYNNALGRPNKKKFI------ARQKSYHGST-LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE 182 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi------~~~~~yhg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (447)
.+.+.... ++.+.++ ++.+.||-.+ .+....+|.....- +.......+.+..++
T Consensus 104 Il~~~~~~-------~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l----~~~ea~~~~~~~~fk-------- 164 (467)
T TIGR02617 104 IYIPVLIK-------KREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNV----YTKEAFDTGVRYDFK-------- 164 (467)
T ss_pred HHHHhhcc-------cccccccccccccccceEEEEecchHHHHHcCceeecc----cchhhcccccCCCCC--------
Confidence 98886531 1112122 1223444442 23333333211100 000000000001111
Q ss_pred hHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc----CC------Cc
Q 013204 183 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC----AF------GR 252 (447)
Q Consensus 183 ~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~----g~------g~ 252 (447)
+..+++.|++.+...+++++..+.++-.++..|..+.+.+.+++++++|++||+.+++|-+-- -| +.
T Consensus 165 ---G~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a 241 (467)
T TIGR02617 165 ---GNFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEY 241 (467)
T ss_pred ---CCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhh
Confidence 111258888888765556677777777777777788899999999999999999999996431 00 11
Q ss_pred ccccc---ccccCCCCCCee--eecccCCCcccceeEE-EeChh-HHHHhhhccCCCCccCcCCCCCCcHH-HHHHHHHH
Q 013204 253 LGTMF---GCDKYSIKPDLV--SFAKALSSAYMPIGAI-LVSPE-VSEVIHSQSNTLGSFSHGFTYSGHPV-SCAVAIEA 324 (447)
Q Consensus 253 ~g~~~---~~~~~~~~~d~v--~~sK~l~gg~~~~g~~-~~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~-~~~aa~a~ 324 (447)
.+... +.+.+ -..|.+ ++||+++ .|+|.+ +++++ +.+.+..-....=.+...-|+++-.- -+.+....
T Consensus 242 ~~~si~eI~rE~~-~~aDsvt~slsKglg---ApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~G 317 (467)
T TIGR02617 242 KNWSIEQITRETY-KYADMLAMSAKKDAM---VPMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVG 317 (467)
T ss_pred cCCCHHHHHHHhh-ccCCEEEEEcCCCCC---CcccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhh
Confidence 11110 00101 125655 5678876 466654 45544 23333221111111223335554322 12222224
Q ss_pred HHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeec--CCCCCCCCCCCcchHHHHHHH-HHHcCce
Q 013204 325 LKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFAD--NKSPNEPFPPEWGIGAYFGAQ-CEKHGML 401 (447)
Q Consensus 325 l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~ 401 (447)
|+....++.+.+.-...++|.+.|.+. +.|++. +-|.+. .++... +.-+...|+ +..+.-. -++-||-
T Consensus 318 l~e~~~~~yl~~ri~qv~yl~~~L~~~-Gvpi~~-~Gghav--~iDa~~~lphip~~~fp-----a~al~~~ly~~~GiR 388 (467)
T TIGR02617 318 LYDGMNLDWLAYRINQVQYLVNGLEEI-GVVCQQ-AGGHAA--FVDAGKLLPHIPADQFP-----AHALACELYKVAGIR 388 (467)
T ss_pred hhhcccHHHHHHHHHHHHHHHHHHHhC-CCcEEe-cCccEE--EEehhhhCCCCChhhCc-----HHHHHHHHHHHcCcc
Confidence 554445566665566678888888775 555544 333332 233221 111111122 2233333 3455655
Q ss_pred EEeeC------------------CEEEEecCC-CCCHHHHHHHHHHHHHHHHH
Q 013204 402 VRVSG------------------DNIMMSPPF-IMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 402 ~~~~g------------------~~iR~~~~~-~~t~e~i~~~~~~l~~~l~~ 435 (447)
....| +.+|+..|- .-|.+++|.+++++..+.+.
T Consensus 389 ~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 389 AVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred eEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 33111 458998774 45999999999999887755
No 345
>PLN02271 serine hydroxymethyltransferase
Probab=99.31 E-value=4.9e-09 Score=103.32 Aligned_cols=278 Identities=13% Similarity=0.067 Sum_probs=152.5
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhh-cccCCccccCCCCCCCCcceecCCCCcccCCCCCCC
Q 013204 103 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 181 (447)
Q Consensus 103 sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (447)
||+.||.+++..++ .++++|+.++..+-|+..-.. ...+... ......+..++++-.
T Consensus 222 SGs~AN~aV~~ALl--------~PGD~IL~ldl~~GGHlshg~~~~~g~~v-----s~sG~~~~~vpY~~d--------- 279 (586)
T PLN02271 222 SCTSANFAVYTGLL--------LPGDRIMGLDSPSGGHMSHGYYTPGGKKV-----SGASIFFESLPYKVN--------- 279 (586)
T ss_pred cHHHHHHHHHHHhc--------CCCCEEEEecCCCCCchhccccccccccc-----ccccceEEEEEcccc---------
Confidence 89999999998664 446899998876655532111 1011000 000011122222110
Q ss_pred hhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccccccc
Q 013204 182 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK 261 (447)
Q Consensus 182 ~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~ 261 (447)
++....+.+++++.... .++++|++..+... ...+ +++++++|+++|++|++|-+|. .|..... .+..
T Consensus 280 -~~~g~IDyd~lek~a~~---~rPKLII~g~Sayp--r~~D----~~~i~eIAdevGA~LmvD~AH~-aGLIa~g-~~~s 347 (586)
T PLN02271 280 -PQTGYIDYDKLEEKALD---FRPKILICGGSSYP--REWD----YARFRQIADKCGAVLMCDMAHI-SGLVAAK-ECVN 347 (586)
T ss_pred -cccCccCHHHHHHHhhh---cCCeEEEECchhcc--CcCC----HHHHHHHHHHcCCEEEEECccc-ccccccC-cCCC
Confidence 00111234777775543 35678888664332 1333 8999999999999999999997 4444321 1111
Q ss_pred CCCCCCeeeec--ccCCCcccceeEEEeChh--------------------HHHHhhhccCCCCccCcCCCCCCcHHHHH
Q 013204 262 YSIKPDLVSFA--KALSSAYMPIGAILVSPE--------------------VSEVIHSQSNTLGSFSHGFTYSGHPVSCA 319 (447)
Q Consensus 262 ~~~~~d~v~~s--K~l~gg~~~~g~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~t~~~~~~~~~ 319 (447)
.-...|+++++ |.|.|+ +-|+++.+++ +.+.+.. ....+..-++....++
T Consensus 348 P~~~aDvvt~TTHKtLrGP--rGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~------aVfPglqgGphn~~IA 419 (586)
T PLN02271 348 PFDYCDIVTSTTHKSLRGP--RGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINF------AVFPSLQGGPHNNHIA 419 (586)
T ss_pred CCcCCcEEEeCCcccCCCC--CceEEEecccccccccCCccccccccccHHHHHHhhc------ccCCccccChhHHHHH
Confidence 11237988765 999885 4477777654 2233321 1111111111222233
Q ss_pred HHHHHHHHHhhhc---HHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH
Q 013204 320 VAIEALKIYKERN---IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE 396 (447)
Q Consensus 320 aa~a~l~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 396 (447)
+-..+++.+..++ +.+++.++.+.|.+.|.+. ++.++..-+ ...++.+++..... .+....+.|.
T Consensus 420 alAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggT-dnHlvLvDl~~~g~----------~G~~ae~~Le 487 (586)
T PLN02271 420 ALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGT-DNHLLLWDLTTLGL----------TGKNYEKVCE 487 (586)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCC-CcceeeecCcccCC----------CHHHHHHHHH
Confidence 3334566554444 5567777778888887764 445443221 12344556543210 1344556677
Q ss_pred HcCceEEe----e------CCEEEEecCC----CCCHHHHHHHHHHHHHHHH
Q 013204 397 KHGMLVRV----S------GDNIMMSPPF----IMSPEEVDELISKYGKALK 434 (447)
Q Consensus 397 ~~Gi~~~~----~------g~~iR~~~~~----~~t~e~i~~~~~~l~~~l~ 434 (447)
+-||.+-- + .+.||+..+. .+.++|++++.+.|.++++
T Consensus 488 ~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 488 MCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred HcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 77887742 1 1468998763 3577888888888877765
No 346
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.28 E-value=4.6e-10 Score=110.58 Aligned_cols=159 Identities=16% Similarity=0.226 Sum_probs=97.1
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhh---hcccCCc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP 151 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~ 151 (447)
..+...++++.++++. +.+..++++||+.|+..++..+. .++++||+....|.+..... +...|..
T Consensus 67 ~~pt~~~le~~la~l~---g~~~~v~fsSG~~Ai~~al~~ll--------~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~ 135 (437)
T PRK05613 67 TNPTVEALENRIASLE---GGVHAVAFASGQAAETAAILNLA--------GAGDHIVTSPRLYGGTETLFLVTLNRLGIE 135 (437)
T ss_pred cChHHHHHHHHHHHHh---CCCeEEEeCCHHHHHHHHHHHhc--------CCCCEEEECCCccHHHHHHHHHHHHhcCeE
Confidence 3456778888888886 33578888899999998887543 33467888777776652211 1111110
Q ss_pred cccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 152 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
+..++.+. +.+++++.+. + ++++|++|...+..|.+.+ +++|+
T Consensus 136 ------------v~~vd~~~-----------------d~e~l~~~l~---~-~tk~V~~e~~~Np~~~v~d----i~~I~ 178 (437)
T PRK05613 136 ------------VTFVENPD-----------------DPESWQAAVQ---P-NTKAFFGETFANPQADVLD----IPAVA 178 (437)
T ss_pred ------------EEEECCCC-----------------CHHHHHHhCC---c-cCeEEEEECCCCCCCcccC----HHHHH
Confidence 11111000 1366777664 2 4556777766555456666 99999
Q ss_pred HHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCCCcccceeEEEe
Q 013204 232 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILV 287 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~gg~~~~g~~~~ 287 (447)
++|+++|+++|+|.+++ .+.. +....+-.|++++| |-++|.+-.+|.++.
T Consensus 179 ~la~~~gi~livD~t~a-~g~~-----~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 179 EVAHRNQVPLIVDNTIA-TAAL-----VRPLELGADVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred HHHHHcCCeEEEECCCc-cccc-----cChHHhCCCEEEeeccceecCCCcceeEEEE
Confidence 99999999999999985 3221 11112235888765 888763234444443
No 347
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.28 E-value=2.7e-09 Score=105.12 Aligned_cols=288 Identities=16% Similarity=0.088 Sum_probs=157.6
Q ss_pred CCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHh-----cCC
Q 013204 50 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA-----LGR 124 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~-----~~~ 124 (447)
-++...+++...+.+.......+........+....+.+++.......-.||+||||||..|+.+++..... .+.
T Consensus 74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~ 153 (460)
T COG0076 74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGK 153 (460)
T ss_pred CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 355666666666654222111111233344455556666654334446789999999999999998765531 122
Q ss_pred CCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCc
Q 013204 125 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET 204 (447)
Q Consensus 125 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~ 204 (447)
.++...|++....|-+..-+...-|.....-... +. ....+.+++++.+... +
T Consensus 154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~---------~~---------------~~~id~~~l~~~i~~~---t 206 (460)
T COG0076 154 PGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTV---------PT---------------DYRIDVDALEEAIDEN---T 206 (460)
T ss_pred cCCCCeEEecCcchhHHHHHHHHhCCCceeEEec---------cC---------------ccccCHHHHHHHHHhh---c
Confidence 2223356667788888765555444321110000 00 0112248888888753 2
Q ss_pred EE-EEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccc-cCCC-CCCeeeec--ccCCCcc
Q 013204 205 IA-AFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCD-KYSI-KPDLVSFA--KALSSAY 279 (447)
Q Consensus 205 ~a-~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~-~~~~-~~d~v~~s--K~l~gg~ 279 (447)
+. +|+........|.+-| +++|.++|++|++++++|.++.|+-..=...... .+++ ..|-++++ |-....
T Consensus 207 ~~g~vV~~aGtT~~G~iDd----i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP- 281 (460)
T COG0076 207 IGGVVVGTAGTTDTGSIDD----IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAP- 281 (460)
T ss_pred cCceEEEEecCCCCCccCC----HHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCC-
Confidence 22 2555555555666666 9999999999999999999998773210000112 1344 36777776 544444
Q ss_pred cceeEEEeChh--HHHHhhhccCCCC--ccCcCC-CCCCcHHHHHHHHHHHHHHhhhcHHH---HHHHHHHHHHHhHhhc
Q 013204 280 MPIGAILVSPE--VSEVIHSQSNTLG--SFSHGF-TYSGHPVSCAVAIEALKIYKERNIVE---QVNKIAPKFQDGVKAF 351 (447)
Q Consensus 280 ~~~g~~~~~~~--~~~~~~~~~~~~~--~~~~~~-t~~~~~~~~~aa~a~l~~~~~~~~~~---~~~~~~~~l~~~L~~l 351 (447)
.+.|+++.+.+ +.+.+........ ...... .++.+....++.++.++.+..+++.+ +..++.+++.+.|+++
T Consensus 282 ~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~ 361 (460)
T COG0076 282 IGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKL 361 (460)
T ss_pred CCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 68888888654 4444432211111 111100 11112224555667777776666544 4447778888888776
Q ss_pred cCCCceeeEeeeeeEEEEEe
Q 013204 352 SDSPIIGEIRGTGLILGTEF 371 (447)
Q Consensus 352 ~~~~~~~~~~~~g~~~~i~~ 371 (447)
..+.++. ++....+.+.+
T Consensus 362 ~~~e~~~--~p~l~~V~fr~ 379 (460)
T COG0076 362 GDFELVN--EPELPIVAFRL 379 (460)
T ss_pred CCcEeec--CCccceEEEEc
Confidence 3233222 23344445554
No 348
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.27 E-value=2e-09 Score=103.96 Aligned_cols=236 Identities=17% Similarity=0.218 Sum_probs=134.9
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
.++-...+++.++++- +-+.++.++||..|+..++.... +..++|++....|++........-
T Consensus 53 gnPt~~~le~~la~Le---~g~~a~~~~SGmaAi~~~l~~ll--------~~Gd~iv~~~~~Y~~t~~~~~~~l------ 115 (386)
T PF01053_consen 53 GNPTVRALEQRLAALE---GGEDALLFSSGMAAISAALLALL--------KPGDHIVASDDLYGGTYRLLEELL------ 115 (386)
T ss_dssp C-HHHHHHHHHHHHHH---T-SEEEEESSHHHHHHHHHHHHS---------TTBEEEEESSSSHHHHHHHHHCH------
T ss_pred ccccHHHHHHHHHHhh---cccceeeccchHHHHHHHHHhhc--------ccCCceEecCCccCcchhhhhhhh------
Confidence 4566778889998884 34679999999999999988653 235789999999988642221100
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
..+++ .+..++..+ .+++++.+. +++++|++|...+....++. +++|+++|
T Consensus 116 ~~~gv---~v~~~d~~d------------------~~~l~~~l~----~~t~~v~~EspsNP~l~v~D----l~~i~~~a 166 (386)
T PF01053_consen 116 PRFGV---EVTFVDPTD------------------LEALEAALR----PNTKLVFLESPSNPTLEVPD----LEAIAKLA 166 (386)
T ss_dssp HHTTS---EEEEESTTS------------------HHHHHHHHC----TTEEEEEEESSBTTTTB-------HHHHHHHH
T ss_pred cccCc---EEEEeCchh------------------HHHHHhhcc----ccceEEEEEcCCCccccccc----HHHHHHHH
Confidence 00111 111222211 377777776 47889999998776654554 99999999
Q ss_pred HhcC-CEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCc-ccceeEEEeCh--hHHHHhhhccCCCCccCcC
Q 013204 235 KKYD-ILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSA-YMPIGAILVSP--EVSEVIHSQSNTLGSFSHG 308 (447)
Q Consensus 235 ~~~g-~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg-~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~ 308 (447)
+++| +++++|.+... +..++-+..-.|+++ .+|-++|. -.-.|+++.+. ++.+.++... ...+
T Consensus 167 ~~~g~~~~vVDnT~at------p~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~-----~~~G 235 (386)
T PF01053_consen 167 KEHGDILVVVDNTFAT------PYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFR-----RLLG 235 (386)
T ss_dssp HHTTT-EEEEECTTTH------TTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHH-----HHHT
T ss_pred HHhCCceEEeeccccc------eeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchh-----hhcC
Confidence 9999 99999988642 122232333478876 45888762 12356666554 6666654321 0111
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceee------------------EeeeeeEEEEE
Q 013204 309 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGE------------------IRGTGLILGTE 370 (447)
Q Consensus 309 ~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~~~~g~~~~i~ 370 (447)
...+|..+...+..++-+ .-..++..++...+.+.|++- |.+.. ..+.|.++.++
T Consensus 236 --~~~~p~da~ll~rgl~Tl--~~R~~~~~~nA~~lA~~L~~h---p~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~ 308 (386)
T PF01053_consen 236 --ATLSPFDAWLLLRGLRTL--PLRMERQNENAEALAEFLEEH---PKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFE 308 (386)
T ss_dssp ---B--HHHHHHHHHHHTTH--HHHHHHHHHHHHHHHHHHHTS---TTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEE
T ss_pred --ccchHHHHHHHhcCCCcH--HHHHHHHHHHHHHHHHHHHhC---CCCCeEEEcccccccceeeeeecccccCceeEEE
Confidence 122444444333333321 112345555666666666543 33322 22556688888
Q ss_pred eecC
Q 013204 371 FADN 374 (447)
Q Consensus 371 ~~~~ 374 (447)
+...
T Consensus 309 l~~~ 312 (386)
T PF01053_consen 309 LKGG 312 (386)
T ss_dssp ESSH
T ss_pred eccc
Confidence 8764
No 349
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.27 E-value=4.2e-10 Score=108.93 Aligned_cols=234 Identities=15% Similarity=0.183 Sum_probs=134.6
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
..+...++++.++++. +.+.++.++||+.|+..++.... ..+++||+....|.+........-
T Consensus 62 ~~P~~~~lE~~la~le---g~~~av~~sSG~aAi~~al~all--------~~GD~Vl~~~~~yg~t~~~~~~~~------ 124 (384)
T PRK06434 62 GNPTVQAFEEKYAVLE---NAEHALSFSSGMGAITSAILSLI--------KKGKRILSISDLYGQTFYFFNKVL------ 124 (384)
T ss_pred CChhHHHHHHHHHHHh---CCCcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEecCccchHHHHHHHHH------
Confidence 4456788999999885 44578999999999999998653 335778887777755532221100
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
..++. .+..++..+. +.++ + .++++.+|.+|.+.+..+.+++ +++|+++|
T Consensus 125 ~~~Gi---~v~fvd~~~~------------------~~~~--l---~~~~tklv~~e~~snpt~~v~D----i~~I~~la 174 (384)
T PRK06434 125 KTLGI---HVDYIDTDRL------------------NSLD--F---DPSNYDLIYAESITNPTLKVPD----IKNVSSFC 174 (384)
T ss_pred HhcCc---EEEEECCCCh------------------hhee--e---cCCCeeEEEEEcCCCCCceeec----HHHHHHHH
Confidence 00110 1122222110 1111 1 1345778899988766665555 99999999
Q ss_pred HhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCCCcc-cceeEEEe-ChhHHHHhhhccCCCCccCcCCC
Q 013204 235 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAY-MPIGAILV-SPEVSEVIHSQSNTLGSFSHGFT 310 (447)
Q Consensus 235 ~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~gg~-~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~t 310 (447)
++++ +++|.++. -+.. ....+...|++++| |.++|.. .-.|+++. ++++.+.++.. ....-
T Consensus 175 ~~~~--lvVD~t~~-s~~~-----~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~-------~~~~G 239 (384)
T PRK06434 175 HEND--VIVDATFA-SPYN-----QNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVER-------RKTLG 239 (384)
T ss_pred HHcC--eEEECCCC-Cccc-----CCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHH-------HHhcC
Confidence 9998 46698863 2122 22234458999876 8887631 22455555 45565655421 00112
Q ss_pred CCCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccCC-----Ccee----eEeeeeeEEEEEee
Q 013204 311 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-----PIIG----EIRGTGLILGTEFA 372 (447)
Q Consensus 311 ~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~-----~~~~----~~~~~g~~~~i~~~ 372 (447)
...+|+.++.++..|+-+ +...++..++...+.+.|+..+.. |... ...|.|.++.+++.
T Consensus 240 ~~~~~~~A~l~~~gL~tL--~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~ 308 (384)
T PRK06434 240 SNPDPIQAYLALRGLKTL--GLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELR 308 (384)
T ss_pred CCCCHHHHHHHHhCCCcH--HHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEEC
Confidence 234566655555555433 234566666777777777654221 1110 12356888888885
No 350
>PLN02452 phosphoserine transaminase
Probab=99.23 E-value=3e-09 Score=102.31 Aligned_cols=333 Identities=11% Similarity=0.017 Sum_probs=186.1
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHHHhcCC--------cccccCcCCChHHHHHHHHHHHhcCc-CCCCeEEEeCCh
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP--------FYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSG 104 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~v~~~~sG 104 (447)
+.+.|..|-.. -+++|++++.+.+-+.. .+|+.. --.+...+..+.+.+++.- .+.+-+++..||
T Consensus 7 ~~~~f~pGP~~-----lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~-~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsg 80 (365)
T PLN02452 7 RVFNFSAGPAT-----LPANVLAKAQAELYNWEGSGMSVMEMSHRGK-EFLSIIQKAEADLRELLDIPDNYEVLFLQGGA 80 (365)
T ss_pred ceEeeeCCCCC-----CCHHHHHHHHHHHhcccccCccccccCCCch-HHHHHHHHHHHHHHHHhCCCCCceEEEEeCcc
Confidence 34556555322 47999999988764311 112110 0123445666677777641 223334555799
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcc-cCCccccCCCCCCCCcceecCCCCcccCCCCCCChh
Q 013204 105 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL-SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 183 (447)
Q Consensus 105 seA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (447)
|.+++.++..+. .++++++++..++-|........ -+..... ...+. ..+. ..| +
T Consensus 81 t~~~ea~~~nl~--------~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~----------~~~~~-~~~~-~~~--~-- 136 (365)
T PLN02452 81 STQFAAIPLNLC--------KPGDKADFVVTGSWSKKAAKEAKKYCKTNVI----------ASGKD-EKYT-KIP--S-- 136 (365)
T ss_pred HHHHHHHHHhcC--------CCCCeEEEEECCHHHHHHHHHHHHhCCCcEE----------EecCC-CCCC-CCC--C--
Confidence 999999988653 23356777766665653222221 1111000 00000 0000 000 0
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCC
Q 013204 184 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS 263 (447)
Q Consensus 184 ~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~ 263 (447)
++++ .. +..+..|.+.......|....+ ++++. ++++|+|-+++ +| +.+...+.++
T Consensus 137 ------~~~~----~~--~~~~~~v~~~hnETstGv~~~~---~~~i~------~~~lvVDa~Ss-~g--~~pidv~~~~ 192 (365)
T PLN02452 137 ------VSEW----EL--TPDAKFVHICANETIHGVEFKD---YPDVG------NVPLVADMSSN-FL--SKPVDVSKYG 192 (365)
T ss_pred ------hHHc----CC--CCCCcEEEECCCCCCCcEecCc---ccccC------CCeEEEECCcc-cc--CcccCHHHcC
Confidence 1222 11 2345667777777777764222 33332 38999999987 43 2244445555
Q ss_pred CCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCCCCc----cCcCCCC-CCcHHHHHHHHHHHHHHhhh-c---HH
Q 013204 264 IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS----FSHGFTY-SGHPVSCAVAIEALKIYKER-N---IV 334 (447)
Q Consensus 264 ~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~t~-~~~~~~~~aa~a~l~~~~~~-~---~~ 334 (447)
+ |+.+..|.++ + .++|+++.++++++.........-. ....+++ +++..++.+..++|+.++++ + ..
T Consensus 193 v--~~~saqK~lG-P-~Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~ 268 (365)
T PLN02452 193 V--IYAGAQKNVG-P-SGVTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAME 268 (365)
T ss_pred E--EEEecccccC-C-CCeEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHH
Confidence 4 6666669884 5 6799999999998775432110000 0112233 45556777777889988764 3 45
Q ss_pred HHHHHHHHHHHHhHhhccCC-CceeeEe-eeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC---CEE
Q 013204 335 EQVNKIAPKFQDGVKAFSDS-PIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNI 409 (447)
Q Consensus 335 ~~~~~~~~~l~~~L~~l~~~-~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g---~~i 409 (447)
++.+++.+++++.|++..+. ....... .....+.+.+.+.. ....|.+.+.++|++..++. +.+
T Consensus 269 ~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~~-----------~~~~f~~~~~~~g~~~~~G~r~~gg~ 337 (365)
T PLN02452 269 KRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGSE-----------LEAEFVKEAAKAGMVQLKGHRSVGGM 337 (365)
T ss_pred HHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCch-----------hHHHHHHHHHHCCCcccCCccccCce
Confidence 67777778888888765322 1111101 11223344433321 35679999999999987653 339
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 410 MMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 410 R~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
|++.--.++.++++.+++.+++.-++
T Consensus 338 R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 338 RASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred EEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 99988888999999999998877653
No 351
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.20 E-value=1e-08 Score=98.62 Aligned_cols=301 Identities=13% Similarity=0.080 Sum_probs=164.5
Q ss_pred hHHHHHHHHHHHhcCc-CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhh-hhc-ccCCccc
Q 013204 77 KPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI-AAS-LSGLPAL 153 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~~-~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~-~~~-~~~~~~~ 153 (447)
+...+..+.+.+++.. .+.+-++++.|||.++|+++..+. . .++.++++. + +.|.... .+. .-+...
T Consensus 39 ~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~------~-~~g~~vLv~-g-~FG~r~~~eia~~~g~~~- 108 (374)
T TIGR01365 39 EKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSML------G-CRGVDVLAW-E-SFGKGWVTDVTKQLKLPD- 108 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcC------C-CCCCeEEEE-C-HHHHHHHHHHHHhcCCCC-
Confidence 4455667777777742 223335668899999999999763 1 123466664 3 4354322 221 111100
Q ss_pred cCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHH
Q 013204 154 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 233 (447)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l 233 (447)
+..+..+ |. +.. ++++++. ...+ .+...-.++|...| ++ ++
T Consensus 109 ----------v~~l~~~--~g-----~~~------~~~~ve~------~~~v---~~vhnETSTGv~np----v~---~i 149 (374)
T TIGR01365 109 ----------VRVLEAE--YG-----KLP------DLKKVDF------KNDV---VFTWNGTTSGVRVP----NG---DF 149 (374)
T ss_pred ----------cEEEcCC--CC-----CCC------CHHHcCC------CCCE---EEecCCCchheecc----cc---cc
Confidence 0011111 00 000 0244431 1223 34444445566665 33 44
Q ss_pred HHh-cCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCCCcccceeEEEeChhHHHHhhhccCC---CC----
Q 013204 234 VKK-YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNT---LG---- 303 (447)
Q Consensus 234 ~~~-~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~~---~~---- 303 (447)
+++ +++++|+|-|-+ +|- .++-.+ + .|++..| |+|++. .++|+++.+++.++........ +.
T Consensus 150 ~~~~~~~lliVDavSs-~g~--~~l~~d--~--iDv~~tgsQK~L~~p-pGls~v~vs~~Al~~~~~~~~y~~~~~~~~~ 221 (374)
T TIGR01365 150 IPADREGLTICDATSA-AFA--QDLDYH--K--LDVVTFSWQKVLGGE-GAHGMLILSPRAVARLESYTPAWPLPKIFRL 221 (374)
T ss_pred ccccCCCcEEEEccch-hcC--CCCChh--H--CcEEEEechhccCCC-CceEEEEECHHHHHHHhhcCCCCCChhhhcc
Confidence 443 589999998865 542 233232 2 6777654 999997 6889999999988776532110 00
Q ss_pred --------c-cCcCCCCCCcHHHHHHHHHHHHHHhhh-c---HHHHHHHHHHHHHHhHhhccCCCceee--EeeeeeEEE
Q 013204 304 --------S-FSHGFTYSGHPVSCAVAIEALKIYKER-N---IVEQVNKIAPKFQDGVKAFSDSPIIGE--IRGTGLILG 368 (447)
Q Consensus 304 --------~-~~~~~t~~~~~~~~~aa~a~l~~~~~~-~---~~~~~~~~~~~l~~~L~~l~~~~~~~~--~~~~g~~~~ 368 (447)
. ......++++..++.+++.+|+.++++ + ..++.+++.+.+++.++++........ .........
T Consensus 222 ~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~ 301 (374)
T TIGR01365 222 TKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVC 301 (374)
T ss_pred ccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEE
Confidence 0 011223344445666667777766553 3 456667778888888888731222221 111222334
Q ss_pred EEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-----CCEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 369 TEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 369 i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----g~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
+.+..+......-.....+...+.+.|.++|+.+.++ ++.+||...-.++++||+.+++.|+-+..
T Consensus 302 v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 302 LKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred EEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 4443221000000000012356888999999988855 36799999889999999999999987654
No 352
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.18 E-value=4e-08 Score=88.69 Aligned_cols=220 Identities=15% Similarity=0.112 Sum_probs=138.8
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS 270 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~ 270 (447)
.++++.+. +.+++|++..|+.-+|.... +.+|-++++++|++++.|=+|+ .|- ...+...-..|+.+
T Consensus 157 ~~~~~~~~----dd~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHs-aGa----vp~~Lh~~gaDfai 223 (407)
T COG3844 157 RALEEAIT----DDVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHS-AGA----VPVDLHAAGADFAI 223 (407)
T ss_pred HHHHHhhc----cceEEEEeccccccccceee----HHHHHHHHHhcCceEEeehhcc-cCC----cceeecccCCCeee
Confidence 45666664 78999999999999998877 9999999999999999999988 322 22444444567765
Q ss_pred ec--ccCCCcccceeEEEeChhHHHHhhhccC----CCCccCcCC---------CC---CCcHHHHHHHHHHHHHHhhh-
Q 013204 271 FA--KALSSAYMPIGAILVSPEVSEVIHSQSN----TLGSFSHGF---------TY---SGHPVSCAVAIEALKIYKER- 331 (447)
Q Consensus 271 ~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~---------t~---~~~~~~~~aa~a~l~~~~~~- 331 (447)
-+ |-+.||--..+++...++..+.....-. +.++|.... -| +.+.+++++...+|++..+-
T Consensus 224 gcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~ 303 (407)
T COG3844 224 GCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVD 303 (407)
T ss_pred eeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcC
Confidence 33 6666542234455555444333221100 011111111 11 12345666666778876553
Q ss_pred --cHHHHHHHHHHHHHHhHhhc-cCCCce--e--eEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEe
Q 013204 332 --NIVEQVNKIAPKFQDGVKAF-SDSPII--G--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV 404 (447)
Q Consensus 332 --~~~~~~~~~~~~l~~~L~~l-~~~~~~--~--~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~ 404 (447)
+++++.-.+++++.+.++.. ..+++. + .-...|..+.+..+. ...+.+.|.++||+.--
T Consensus 304 i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~--------------~~~V~qaLi~rGVigD~ 369 (407)
T COG3844 304 ITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPH--------------GYQVMQALIDRGVIGDF 369 (407)
T ss_pred HHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCc--------------HHHHHHHHHHcCccccc
Confidence 34555566777777777765 323321 1 112234444444332 45678999999998653
Q ss_pred e-CCEEEEecC-CCCCHHHHHHHHHHHHHHHHHHH
Q 013204 405 S-GDNIMMSPP-FIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 405 ~-g~~iR~~~~-~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
. .+.+||.|. ++.+-+|+=.+++.|++++++..
T Consensus 370 R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 370 REPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred cCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 3 367999874 88999999999999999998753
No 353
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.16 E-value=3.1e-10 Score=105.47 Aligned_cols=197 Identities=17% Similarity=0.130 Sum_probs=119.6
Q ss_pred CCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcce
Q 013204 50 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 129 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~ 129 (447)
.+|++.+++.+.. .+.-. .+..+...++++++++++ +.+.++|++||+.||..+++.... +...
T Consensus 7 ~~~~m~~a~~~a~-~gd~~----Yg~D~~~~~l~~~i~~l~---g~e~a~f~~sGT~An~~al~~~~~--------~~~~ 70 (290)
T PF01212_consen 7 PTPAMLEAMAAAN-VGDDA----YGEDPTTARLEERIAELF---GKEAALFVPSGTMANQLALRAHLR--------PGES 70 (290)
T ss_dssp S-HHEEHHHHHTT-SB-CC----TTSSHHHHHHHHHHHHHH---TSSEEEEESSHHHHHHHHHHHHHH--------TTEE
T ss_pred CCHHHHHHHHccc-cCCcc----cCCChhHHHHHHHHHHHc---CCCEEEEeCCCChHHHHHHHHHHh--------cCCc
Confidence 5899999995443 22211 346778889999999998 667889999999999999997752 2355
Q ss_pred EEEEcCCCccc--hhhhh-cccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCC--Cc
Q 013204 130 FIARQKSYHGS--TLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP--ET 204 (447)
Q Consensus 130 vi~~~~~yhg~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~--~~ 204 (447)
||+-+ ..|.. ..++. ..+|.... .++..+. +..++++|++.+..... .+
T Consensus 71 vi~~~-~aHi~~~E~ga~~~~~G~~~~------------~l~~~~~-------------G~l~~~~l~~~~~~~~~h~~~ 124 (290)
T PF01212_consen 71 VICAD-TAHIHFDETGAIEELSGAKLI------------PLPSDDD-------------GKLTPEDLEAAIEEHGAHHPQ 124 (290)
T ss_dssp EEEET-TEHHHHSSTTHHHHHTTCEEE------------EEBECTG-------------TBB-HHHHHHHHHHHTGTSGG
T ss_pred eeccc-cceeeeeccchhhHhcCcEEE------------ECCCccc-------------CCCCHHHHHHHhhhccccCCC
Confidence 66544 34443 22222 22333211 1111000 11124888888876432 57
Q ss_pred EEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc-----ccccCCCCCCeeee--cccCCC
Q 013204 205 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-----GCDKYSIKPDLVSF--AKALSS 277 (447)
Q Consensus 205 ~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~-----~~~~~~~~~d~v~~--sK~l~g 277 (447)
+++|.+|......|..+++.+.|++|.++|++||+.|++|-+ |...-. ....+.--.|++++ +|.++.
T Consensus 125 ~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGA-----Rl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~ 199 (290)
T PF01212_consen 125 PAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGA-----RLANAAAALGVSLAEIAAGADSVSFGGTKNGGA 199 (290)
T ss_dssp EEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEET-----THHHHHCHHHHHHHHHHTTSSEEEEETTSTT-S
T ss_pred ccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehh-----hHHHhhhcccccHHHHhhhCCEEEEEEEccccc
Confidence 899999998888666888999999999999999999999944 321100 00111123687765 476553
Q ss_pred cccceeEEEeChhHHHHh
Q 013204 278 AYMPIGAILVSPEVSEVI 295 (447)
Q Consensus 278 g~~~~g~~~~~~~~~~~~ 295 (447)
..-+++++++++++..
T Consensus 200 --~~Gavl~~~~~~i~~~ 215 (290)
T PF01212_consen 200 --PGGAVLAGNKEFIAKA 215 (290)
T ss_dssp --SSEEEEEESHHHHHHH
T ss_pred --ccceEEEechHHHHHH
Confidence 2235666888865543
No 354
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.14 E-value=3.1e-08 Score=94.36 Aligned_cols=200 Identities=14% Similarity=0.085 Sum_probs=126.8
Q ss_pred cEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeee--cccCCCcccc
Q 013204 204 TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYMP 281 (447)
Q Consensus 204 ~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~--sK~l~gg~~~ 281 (447)
....|.+.......|...+ ++.+.+++++|+|-+-+ ++ +.++-++.+ |++.. .|+|+ + .+
T Consensus 143 d~~~v~~t~NETstGv~~~---------~~~~~~~~llvvD~sS~-~~--s~pid~~~~----dvi~agsQKnlg-P-~G 204 (364)
T PRK12462 143 RAPFRHYVSNETVEGLQFP---------DAAGLPDSPLIADMSSD-FM--SRPFDVEAY----GMVYAHAQKNLG-P-AG 204 (364)
T ss_pred CCcEEEEccCCCCceEecC---------cccccCCCeEEEEcCch-hh--CCCCChHHc----cEEEeeccccCC-C-Cc
Confidence 3556777777777776654 23334689999997755 42 233434443 77755 49997 5 68
Q ss_pred eeEEEeChhHHHHhhhccCCCCccC-------cCCCC-CCcHHHHHHHHHHHHHHhhh--c---HHHHHHHHHHHHHHhH
Q 013204 282 IGAILVSPEVSEVIHSQSNTLGSFS-------HGFTY-SGHPVSCAVAIEALKIYKER--N---IVEQVNKIAPKFQDGV 348 (447)
Q Consensus 282 ~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~t~-~~~~~~~~aa~a~l~~~~~~--~---~~~~~~~~~~~l~~~L 348 (447)
+++++.+++.++...... + .+. ..+++ +++...+-+...+++.+.++ + ..++.+++.+.+++.+
T Consensus 205 ltvvivs~~al~~~~~~~--p-~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~i 281 (364)
T PRK12462 205 VTVAIIRRALLERVPDTL--P-PMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATL 281 (364)
T ss_pred eEEEEECHHHHhhccccC--C-chhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 999999999887664321 1 111 22344 44455677777888888766 4 4456666777788888
Q ss_pred hhcc-CCCceeeEeeeeeEE-EEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC---CEEEEecCCCCCHHHHH
Q 013204 349 KAFS-DSPIIGEIRGTGLIL-GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVD 423 (447)
Q Consensus 349 ~~l~-~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g---~~iR~~~~~~~t~e~i~ 423 (447)
+++. -+..+.....++.+. .+.+.++. +...|.+.+.++|++..-+. +.+|.+.--.++.|.++
T Consensus 282 d~~~~~~~~~~~~~~RS~mnv~f~~~~~~-----------l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~ 350 (364)
T PRK12462 282 DALNEVIDCHAHRAARSTMNVAFRFRQPR-----------LDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVS 350 (364)
T ss_pred HhCCCcccCCCChhhcCcceEEEEcCCHH-----------HHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHH
Confidence 7764 223222222233332 23333221 45678899999999875443 45999988888999999
Q ss_pred HHHHHHHHHHHH
Q 013204 424 ELISKYGKALKA 435 (447)
Q Consensus 424 ~~~~~l~~~l~~ 435 (447)
.+++-+++.-++
T Consensus 351 ~L~~fm~~f~~~ 362 (364)
T PRK12462 351 RLCAFLKDFAIR 362 (364)
T ss_pred HHHHHHHHHHHh
Confidence 888888776543
No 355
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.12 E-value=3.5e-08 Score=104.97 Aligned_cols=312 Identities=12% Similarity=0.136 Sum_probs=165.5
Q ss_pred CCHHHHHHHHHHHhcCCccccc----CcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCC
Q 013204 50 SEPRLVAAATAQLNTLPFYHSF----WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRP 125 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~ 125 (447)
-++.|.+++.+..+-+..++++ ..+.-+...++...++++. +-+.+++.+..++|.+.++++...+ . .. .
T Consensus 117 ~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt-G~~~anaSL~d~aTAaaea~~~a~~-~--~~--g 190 (993)
T PLN02414 117 VPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLT-GLPMSNASLLDEGTAAAEAMAMCNN-I--LK--G 190 (993)
T ss_pred CCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHh-CCChhhEeecCChHHHHHHHHHHHh-c--cc--C
Confidence 4455557777655422112111 1122233456667777775 3566789999999999997765442 1 11 1
Q ss_pred CcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcE
Q 013204 126 NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETI 205 (447)
Q Consensus 126 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~ 205 (447)
++++|++.+..| +.+...+... ....++ .+..++. ++.. . ..+.+
T Consensus 191 ~~~~VlVs~~~h-P~~~~v~~t~-----a~~~Gi---eV~~v~~---------------------~~~~----~-~~~~v 235 (993)
T PLN02414 191 KKKKFLIASNCH-PQTIDVCQTR-----ADGLGL---EVVVADE---------------------KDFD----Y-SSGDV 235 (993)
T ss_pred CCCEEEEcCccC-HhHHHHHHHh-----hhhcCC---EEEEecc---------------------hhhc----c-ccCce
Confidence 245676655555 4433332111 001111 1111221 1100 0 12346
Q ss_pred EEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEE--ehhhcCCCccccccccccCCCCCCeeeec--c---cCCCc
Q 013204 206 AAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA--DEVICAFGRLGTMFGCDKYSIKPDLVSFA--K---ALSSA 278 (447)
Q Consensus 206 a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~--DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K---~l~gg 278 (447)
+++++. ..+..|.+.+ +++|.++|+++|+++++ |-+.. .+-. .--.+-.|+++.+ | .++.|
T Consensus 236 ~~vlvq-~P~~~G~v~d----v~~I~~~ah~~GaL~iVaad~lal----~~l~---~pge~GADi~vgsgqKwg~P~G~G 303 (993)
T PLN02414 236 CGVLVQ-YPATDGEVLD----YAEFVKNAHANGVKVVMATDLLAL----TMLK---PPGEWGADIVVGSAQRFGVPMGYG 303 (993)
T ss_pred EEEEEe-cCCCCeEEcC----HHHHHHHHHHcCCEEEEEECHHHh----cCCC---CHhhccCcEEEECCCccccCCCCC
Confidence 566532 3334567766 99999999999999999 53322 1100 1112346888653 3 23323
Q ss_pred ccceeEEEeChhHHHHhhhc--c---CCCC--cc-------C-cC--CCCCCcH---HHHHHHHHHHH--HHhh---hcH
Q 013204 279 YMPIGAILVSPEVSEVIHSQ--S---NTLG--SF-------S-HG--FTYSGHP---VSCAVAIEALK--IYKE---RNI 333 (447)
Q Consensus 279 ~~~~g~~~~~~~~~~~~~~~--~---~~~~--~~-------~-~~--~t~~~~~---~~~~aa~a~l~--~~~~---~~~ 333 (447)
+...|++++++++.+.+-.. + ...+ .+ . |. -..+.|. .++.+++++.. .+.. +++
T Consensus 304 GP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~I 383 (993)
T PLN02414 304 GPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 383 (993)
T ss_pred CCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHH
Confidence 35689999999876643210 0 0000 00 0 00 0112233 23333333221 2112 334
Q ss_pred HHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-CCEEEEe
Q 013204 334 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMMS 412 (447)
Q Consensus 334 ~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-g~~iR~~ 412 (447)
.+++..+..++++.|+++ +..+... .....+.+.+. . ...+.++|.++||.++.. ++.+|+|
T Consensus 384 a~ri~~la~~l~~~L~~~-G~~~~~~--~~f~~vt~~~~--~------------~~~v~~~L~~~gI~l~~~~~~~lrvs 446 (993)
T PLN02414 384 AQRVHGLAGVFAAGLKKL-GFQVQSL--PFFDTVKVKCS--D------------ADAIADAAAKVGINLRVVDANTVTVS 446 (993)
T ss_pred HHHHHHHHHHHHHHHhhc-CCccCCC--CCcCeEEEecC--C------------HHHHHHHHHHCCCeeEEecCCeEEEE
Confidence 577888888888888765 2322211 11112223322 1 245889999999988866 4679999
Q ss_pred cCCCCCHHHHHHHHHHHHH
Q 013204 413 PPFIMSPEEVDELISKYGK 431 (447)
Q Consensus 413 ~~~~~t~e~i~~~~~~l~~ 431 (447)
++..+|++|||+++++|..
T Consensus 447 ~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 447 FDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred eeccCCHHHHHHHHHHHcc
Confidence 9999999999999999963
No 356
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.07 E-value=1.4e-08 Score=97.45 Aligned_cols=206 Identities=19% Similarity=0.203 Sum_probs=114.2
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc-CCCccccccccccCCCCCCe
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDL 268 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~-g~g~~g~~~~~~~~~~~~d~ 268 (447)
.+.++++.....| ++||+..+.-. .. --+++++++|++.|++|++|-.|. |+--.| .+ -+-+. ..|+
T Consensus 158 ~d~l~~~a~~~kP---klIi~G~S~y~---~~---~d~~~~reIad~vga~l~~D~sH~~GLIa~g-~~-~~P~~-~ADv 225 (399)
T PF00464_consen 158 YDELEKLAKEHKP---KLIICGASSYP---RP---IDFKRFREIADEVGAYLMADISHIAGLIAGG-LF-PNPFP-YADV 225 (399)
T ss_dssp HHHHHHHHHHH-----SEEEEE-SSTS---S------HHHHHHHHHHTT-EEEEE-TTTHHHHHTT-SS---GCC-TSSE
T ss_pred HHHHHHHHhhcCC---CEEEECchhcc---Cc---cCHHHHHHHHHhcCcEEEecccccccceehh-ee-cCccc-cceE
Confidence 4888888877555 57777665321 12 227999999999999999999886 331111 11 11222 2799
Q ss_pred eeec--ccCCCcccceeEEEeC--------------hhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh--
Q 013204 269 VSFA--KALSSAYMPIGAILVS--------------PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-- 330 (447)
Q Consensus 269 v~~s--K~l~gg~~~~g~~~~~--------------~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-- 330 (447)
++.| |.|.| .+-|.++.+ +++.+.+... ...+..-+.+.-.+++-..+++...+
T Consensus 226 vt~sThKtl~G--PrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~a------vfP~~qg~~h~~~iaalAval~ea~~~~ 297 (399)
T PF00464_consen 226 VTGSTHKTLRG--PRGGIILTNKGSKNVDKKGKEIDEELAEKIDSA------VFPGLQGGPHMHRIAALAVALKEALSPE 297 (399)
T ss_dssp EEEESSGGG-S--SS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHH------HTTTT-SS--HHHHHHHHHHHHHHTSHH
T ss_pred EEeeccccccc--cCceEEEEcCCccccCCcccccHHHHHHHhccc------cCCCcccCcchhHHHHHHHHHhcccCHH
Confidence 9876 89998 577888888 7788887642 12221112222233333344554433
Q ss_pred -hcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee----
Q 013204 331 -RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---- 405 (447)
Q Consensus 331 -~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---- 405 (447)
.+...++.++.+.|.+.|++. ++.++..- ....++.+++..... .+....+.|.+.||.+-..
T Consensus 298 fk~Ya~qVv~NAk~La~~L~~~-G~~v~~gg-Td~H~vlvd~~~~~~----------~g~~a~~~Le~~gI~vnkn~iP~ 365 (399)
T PF00464_consen 298 FKEYAKQVVKNAKALAEALQER-GFKVVTGG-TDNHQVLVDLRSFGI----------DGKEAEKALEEAGIIVNKNTIPG 365 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS--SSSEEEEEGGGGTS-----------HHHHHHHHHHTTEE-EEE--TT
T ss_pred HHHHHHHHHHHHHHHHHHHhhC-CcEEEECC-CCCCeEEEEeccccc----------chHHHHHHHHhcCeeecccccCC
Confidence 345677777888888888775 33333211 123345566654221 1445677888999998632
Q ss_pred ------CCEEEEecC----CCCCHHHHHHHHH
Q 013204 406 ------GDNIMMSPP----FIMSPEEVDELIS 427 (447)
Q Consensus 406 ------g~~iR~~~~----~~~t~e~i~~~~~ 427 (447)
.+.||+..+ ....++|+.++.+
T Consensus 366 d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~ 397 (399)
T PF00464_consen 366 DRSPFVPSGLRLGTPALTRRGMKEEDMKEIAE 397 (399)
T ss_dssp TSTTTT-SEEEEESHHHHHTT--HHHHHHHHH
T ss_pred CCCCCCCCEEEECCHHHHhCCCCHHHHHHHHh
Confidence 157999965 2345666665544
No 357
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.05 E-value=4.2e-08 Score=92.74 Aligned_cols=192 Identities=17% Similarity=0.234 Sum_probs=119.7
Q ss_pred ChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccC
Q 013204 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 155 (447)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 155 (447)
.+....+++.+.++. +...++.++||..|...|+.... +...+++.++..|.|......... .
T Consensus 76 nPt~~~le~~iaal~---ga~~~l~fsSGmaA~~~al~~L~--------~~g~~iV~~~~~Y~gT~~~l~~~~------~ 138 (409)
T KOG0053|consen 76 NPTRDVLESGIAALE---GAAHALLFSSGMAAITVALLHLL--------PAGDHIVATGDVYGGTLRILRKFL------P 138 (409)
T ss_pred CCchHHHHHHHHHHh---CCceEEEecccHHHHHHHHHHhc--------CCCCcEEEeCCCcccHHHHHHHHH------H
Confidence 344556777777774 45569999999999999999765 556889999999988742221111 0
Q ss_pred CCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHH
Q 013204 156 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 235 (447)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~ 235 (447)
.++... .+++ .++++++.....+ ++.+|.+|..-+....++. +++|+++|+
T Consensus 139 ~~gie~---~~vd---------------------~~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~D----I~~l~~la~ 189 (409)
T KOG0053|consen 139 KFGGEG---DFVD---------------------VDDLKKILKAIKE-NTKAVFLESPSNPLLKVPD----IEKLARLAH 189 (409)
T ss_pred HhCcee---eeec---------------------hhhHHHHHHhhcc-CceEEEEECCCCCcccccc----HHHHHHHHh
Confidence 111111 1111 1444444433333 6788888887555544444 999999999
Q ss_pred hcCCEEEEehhhcCCCccccccccccCCCCCCeeee--cccCCCcc-cceeEEEeC-hhHHHHhhhccCCCCccCcCCCC
Q 013204 236 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSAY-MPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTY 311 (447)
Q Consensus 236 ~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~--sK~l~gg~-~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~t~ 311 (447)
++|+++++|++..+. ..++-+..-+|+|+- .|-++|.. .-.|.++.+ +++...+... ...--+
T Consensus 190 ~~g~~vvVDnTf~~p------~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~-------~~~lg~ 256 (409)
T KOG0053|consen 190 KYGFLVVVDNTFGSP------YNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFL-------QEDLGW 256 (409)
T ss_pred hCCCEEEEeCCcCcc------cccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHH-------HHHhcC
Confidence 999999999987643 123333445899975 58888732 223455664 7777766532 122345
Q ss_pred CCcHHHHHHHHHHHH
Q 013204 312 SGHPVSCAVAIEALK 326 (447)
Q Consensus 312 ~~~~~~~~aa~a~l~ 326 (447)
..+|+.+.-....++
T Consensus 257 ~~~p~~~~ll~Rglk 271 (409)
T KOG0053|consen 257 CEDPFDLFLLSRGLK 271 (409)
T ss_pred CCCHHHHHHHhcCcc
Confidence 667777665544443
No 358
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.04 E-value=1.4e-07 Score=87.69 Aligned_cols=308 Identities=14% Similarity=0.125 Sum_probs=159.8
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHH-HHHHHHHHHHhcC-----CCCcceEEEEcCCCccchhhhhccc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT-QVKLVWYYNNALG-----RPNKKKFIARQKSYHGSTLIAASLS 148 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~-Al~~~~~~~~~~~-----~~~~~~vi~~~~~yhg~~~~~~~~~ 148 (447)
..+.+.|..+.+++++ ..+.++++...+.|..++. +|..+..+....+ +.++-++|+..|+|-.+....-..+
T Consensus 67 ~l~Gipe~r~l~a~ll-gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~G 145 (425)
T PF12897_consen 67 GLDGIPEARELFAELL-GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFG 145 (425)
T ss_dssp -SS--HHHHHHHHHHH-TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT
T ss_pred ccCChHHHHHHHHHHh-CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhC
Confidence 4456778888888886 4677788777666655543 3333333222111 1235789999999966643222111
Q ss_pred CCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHH
Q 013204 149 GLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFE 228 (447)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~ 228 (447)
. .-+++|..-. + + +++.+|+++.+ ...+++|.+=|.+++-..+.++++..+
T Consensus 146 -i--------------emi~VpM~~d----G---P-----DmD~Ve~LV~~--D~svKGiWcVP~ySNPtG~tySde~vr 196 (425)
T PF12897_consen 146 -I--------------EMIPVPMTED----G---P-----DMDMVEELVAE--DPSVKGIWCVPKYSNPTGITYSDEVVR 196 (425)
T ss_dssp ----------------EEEEEEEETT----E---E------HHHHHHHTHT--STTEEEEEE-SSS-TTT-----HHHHH
T ss_pred -c--------------EEEecCCCCC----C---C-----CHHHHHHHHhc--CCccceEEeCCCccCCCCccCCHHHHH
Confidence 0 0111111000 0 0 14888888764 357999999998655434788999999
Q ss_pred HHHHH-HHhcCCEEEEehhhcCCCcc-cc--ccc-cccC-----CCCCCee----eecc-cCCCcccceeEEEeChhHHH
Q 013204 229 KVQAV-VKKYDILFIADEVICAFGRL-GT--MFG-CDKY-----SIKPDLV----SFAK-ALSSAYMPIGAILVSPEVSE 293 (447)
Q Consensus 229 ~l~~l-~~~~g~~li~DEv~~g~g~~-g~--~~~-~~~~-----~~~~d~v----~~sK-~l~gg~~~~g~~~~~~~~~~ 293 (447)
+++.+ +...+..++-|.+|+ +--. +. .-. .+.+ .-.||.+ +.|| .+.| .+++++..+++-++
T Consensus 197 rlA~m~~AA~DFRI~WDNAY~-vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~G--aGva~~aaS~~Nl~ 273 (425)
T PF12897_consen 197 RLAAMKTAAPDFRIFWDNAYA-VHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPG--AGVAFFAASEANLA 273 (425)
T ss_dssp HHHHS--SSTT-EEEEE-TTT-T-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TT--SS-EEEEE-HHHHH
T ss_pred HHhcCCcCCcCeEEEeecCce-EeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCC--cceeeeecCHHHHH
Confidence 99998 446799999999986 2111 10 000 0000 1146644 4578 5655 58999999998777
Q ss_pred HhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhh-cHHHHHHHHHHHHHHhH----h----hcc-CCCceeeEeee
Q 013204 294 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER-NIVEQVNKIAPKFQDGV----K----AFS-DSPIIGEIRGT 363 (447)
Q Consensus 294 ~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~-~~~~~~~~~~~~l~~~L----~----~l~-~~~~~~~~~~~ 363 (447)
.+... ....+.+.+-+.+..-..-++- .+ ++.+++++..+.++-+. + +|. ..++..+.++.
T Consensus 274 ~~~~~-------~~~~tIgpdKvNQLRHvrff~d--~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~ 344 (425)
T PF12897_consen 274 WIKKH-------LSVQTIGPDKVNQLRHVRFFKD--AEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPK 344 (425)
T ss_dssp HHHHH-------HHHH-S---HHHHHHHHHHHHS--HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---S
T ss_pred HHHHH-------hcCceeCccHHHHHHHHHHhcC--hhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCC
Confidence 77642 2233556666666544433332 23 56666666555544322 2 233 34567777777
Q ss_pred eeE-EEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-----------CEEEEecCCCCCHHHHHHHHHHHHH
Q 013204 364 GLI-LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----------DNIMMSPPFIMSPEEVDELISKYGK 431 (447)
Q Consensus 364 g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-----------~~iR~~~~~~~t~e~i~~~~~~l~~ 431 (447)
|.+ +.++..+. .+..+.+.+.+.||..++.| +.||+.|+ .-+.||++.+++.+.-
T Consensus 345 GGYFIsld~~~G------------~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS-~P~leel~~Am~~~~~ 411 (425)
T PF12897_consen 345 GGYFISLDVLDG------------TAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPS-YPSLEELETAMDVFAT 411 (425)
T ss_dssp BSS-EEEEESTT-------------HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--S-SS-HHHHHHHHHHHHH
T ss_pred CceEEEEecCCC------------hHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCC-CCCHHHHHHHHHHHHH
Confidence 764 45555443 26778999999999999754 46999998 5899999999999988
Q ss_pred HHHHHH
Q 013204 432 ALKATE 437 (447)
Q Consensus 432 ~l~~~~ 437 (447)
+++...
T Consensus 412 cv~la~ 417 (425)
T PF12897_consen 412 CVKLAA 417 (425)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876543
No 359
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.04 E-value=7.1e-08 Score=88.98 Aligned_cols=330 Identities=16% Similarity=0.128 Sum_probs=179.8
Q ss_pred CHHHHHHHHHHHhcCCc---ccccCcCCChHHHHHHHHHHHhcC-cCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCC
Q 013204 51 EPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPN 126 (447)
Q Consensus 51 ~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~ 126 (447)
+..+++.....+..++. .++...+..-.....++.+.+.=. +.+++.++++.|.|.|+...++++.. ..
T Consensus 88 p~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~-------~~ 160 (475)
T KOG0258|consen 88 PTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIA-------GK 160 (475)
T ss_pred CHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhc-------CC
Confidence 34555555555554332 122233444455566666665532 35778999999999999999997742 24
Q ss_pred cceEEEEcCCCccchhhhhcccCC--ccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhC-C-
Q 013204 127 KKKFIARQKSYHGSTLIAASLSGL--PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG-P- 202 (447)
Q Consensus 127 ~~~vi~~~~~yhg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~-~- 202 (447)
+..|++.-|-|.-++.-....++. +-|. +-...|. .+.++|++.+.... .
T Consensus 161 ~~GvliPiPQYPLYsAti~l~~~~~v~YyL-------------dEe~~W~-------------ld~~el~~~~~eA~k~i 214 (475)
T KOG0258|consen 161 KTGVLIPIPQYPLYSATISLLGGTQVPYYL-------------DEESNWS-------------LDVAELERSVDEARKGI 214 (475)
T ss_pred CCceEeecCCCchhHHHHHHhCCcccceee-------------ccccCCC-------------CCHHHHHHHHHHHhccC
Confidence 678999999997765333222222 1111 0000010 01366777665432 1
Q ss_pred CcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCc-ccc-ccccc----cCC-CCCC---ee---
Q 013204 203 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR-LGT-MFGCD----KYS-IKPD---LV--- 269 (447)
Q Consensus 203 ~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~-~g~-~~~~~----~~~-~~~d---~v--- 269 (447)
+..++|+++|.|++| .+.+.+-+++|..+|.++++.|+.||||..--. .+. .+.+. ..+ ..+| ++
T Consensus 215 ~~r~lvvINPGNPTG--qvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~Sfh 292 (475)
T KOG0258|consen 215 NPRALVVINPGNPTG--QVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFH 292 (475)
T ss_pred CceEEEEECCCCccc--hhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeee
Confidence 346789999999998 456889999999999999999999999874322 332 22221 122 1243 22
Q ss_pred eecccCCC-cccceeEEE---eChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHH----------HHH--HHHHhhhcH
Q 013204 270 SFAKALSS-AYMPIGAIL---VSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVA----------IEA--LKIYKERNI 333 (447)
Q Consensus 270 ~~sK~l~g-g~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa----------~a~--l~~~~~~~~ 333 (447)
..||++.| .+.+-|++= ..+++.+.+.+... ....++..+.+.. -.. +..-+++..
T Consensus 293 SvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~s--------i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~i 364 (475)
T KOG0258|consen 293 SVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLAS--------IKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGI 364 (475)
T ss_pred cccccceeeecccCCeeecccCChhHHHHHHHHHh--------hhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhH
Confidence 35787654 114556542 24555444432100 0001111111100 001 111124556
Q ss_pred HHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEE---eecCC----CCCCCCCCCcchHHHHH-HHHHHcCceEEee
Q 013204 334 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE---FADNK----SPNEPFPPEWGIGAYFG-AQCEKHGMLVRVS 405 (447)
Q Consensus 334 ~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~---~~~~~----~~~~~~~~~~~~~~~~~-~~l~~~Gi~~~~~ 405 (447)
.+.++.+.+.+.+.++.+ +.+.+.+.+|.|..+- ++... ......+ ....+ +.|..-||.+.|+
T Consensus 365 l~~l~~ra~l~~~~~ns~---~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~P-----D~FYc~~LLe~tGIcvVPG 436 (475)
T KOG0258|consen 365 LSSLRSRAKLTEDAFNSL---EGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAP-----DEFYCLKLLEATGICVVPG 436 (475)
T ss_pred HHHHHHHhHHHHHHHhhc---CceeeccCccceeecccccCCHHHHHHHHHhCCCC-----cHHHHHHHHHhcCeEEecC
Confidence 777777888888888777 4566667788876542 22100 0000000 11233 4455679999886
Q ss_pred C-------C-EEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 013204 406 G-------D-NIMMSPPFIMSPEEVDELISKYGKALKAT 436 (447)
Q Consensus 406 g-------~-~iR~~~~~~~t~e~i~~~~~~l~~~l~~~ 436 (447)
. . .+|.+ ..... + +.++++++.=+++
T Consensus 437 SGFGQ~~GtyH~R~T---iLp~~-~-~~i~~~~~fH~~f 470 (475)
T KOG0258|consen 437 SGFGQKEGTYHFRTT---ILPPG-L-EIIEKFKKFHAEF 470 (475)
T ss_pred CCCCCCCceeEEEEe---ecCch-h-HHHHHHHHHHHHH
Confidence 2 2 38888 33333 4 6666666655444
No 360
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.04 E-value=6.2e-09 Score=95.61 Aligned_cols=196 Identities=16% Similarity=0.155 Sum_probs=120.4
Q ss_pred ccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCC
Q 013204 45 TALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR 124 (447)
Q Consensus 45 ~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~ 124 (447)
+++.+.+++=.+++- .++..+..|+.. ..+-...+++++..+= .+. -.+.+.||..|...|+..+.
T Consensus 33 Tsy~F~d~~haa~lF-~l~~~G~iYsRi--~NPT~~vlE~RiAaLE--GG~-aa~a~aSG~AA~~~ai~~la-------- 98 (426)
T COG2873 33 TSYVFDDTDHAAALF-GLKEPGNIYTRI--MNPTTDVLEERIAALE--GGV-AALAVASGQAAITYAILNLA-------- 98 (426)
T ss_pred eeeecCCHHHHHHHh-CCCcCCceeeec--cCchHHHHHHHHHHhh--cch-hhhhhccchHHHHHHHHHhc--------
Confidence 445555554333322 223323333322 2334556888888773 233 35667889999999888553
Q ss_pred CCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCc
Q 013204 125 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET 204 (447)
Q Consensus 125 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~ 204 (447)
...++|+.-..-|=|+...... + .+.+++. +..++-.+ ++++++.+. ++
T Consensus 99 ~aGD~iVss~~LYGGT~~lf~~-t-----l~~~Gi~---v~fvd~~d------------------~~~~~~aI~----~n 147 (426)
T COG2873 99 GAGDNIVSSSKLYGGTYNLFSH-T-----LKRLGIE---VRFVDPDD------------------PENFEAAID----EN 147 (426)
T ss_pred cCCCeeEeeccccCchHHHHHH-H-----HHhcCcE---EEEeCCCC------------------HHHHHHHhC----cc
Confidence 2357788877777665321110 0 1112211 12222211 277777775 57
Q ss_pred EEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccce
Q 013204 205 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI 282 (447)
Q Consensus 205 ~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~ 282 (447)
+++|.+|.+-+.++.++. ++.|.++|+++|++||+|.+.+. ++.++-...-.|+|+ .+|-++|-+-.+
T Consensus 148 Tkavf~EtigNP~~~v~D----ie~ia~iAh~~gvpliVDNT~at------pyl~rP~~hGADIVvHS~TK~igGhGt~i 217 (426)
T COG2873 148 TKAVFAETIGNPGLDVLD----IEAIAEIAHRHGVPLIVDNTFAT------PYLCRPIEHGADIVVHSATKYIGGHGTAI 217 (426)
T ss_pred cceEEEEeccCCCccccC----HHHHHHHHHHcCCcEEEecCCCc------ceecchhhcCCCEEEEeecccccCCcccc
Confidence 889999999888887776 99999999999999999987652 233444444578885 679999855778
Q ss_pred eEEEeChhHHHHh
Q 013204 283 GAILVSPEVSEVI 295 (447)
Q Consensus 283 g~~~~~~~~~~~~ 295 (447)
|.++....-.++-
T Consensus 218 GG~iVD~G~FDw~ 230 (426)
T COG2873 218 GGVIVDGGKFDWT 230 (426)
T ss_pred ceEEEeCCccccc
Confidence 8777655444433
No 361
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.00 E-value=7.7e-08 Score=92.80 Aligned_cols=234 Identities=17% Similarity=0.186 Sum_probs=128.2
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeC-ChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCC-cc
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTN-SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PA 152 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~-sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~-~~ 152 (447)
+.....+-++..++.| +.++.+|.. |.|.+|.+++..+. .+++ .|.++.+.|-+...++..+|. |.
T Consensus 64 p~G~I~eAe~~aA~~f---GAd~t~flvnGsT~g~~a~i~a~~--------~~gd-~VLv~RN~HkSv~~alil~ga~Pv 131 (417)
T PF01276_consen 64 PEGIIKEAEELAARAF---GADKTFFLVNGSTSGNQAMIMALC--------RPGD-KVLVDRNCHKSVYNALILSGAIPV 131 (417)
T ss_dssp TBTHHHHHHHHHHHHH---TESEEEEESSHHHHHHHHHHHHHT--------TTTC-EEEEETT--HHHHHHHHHHTEEEE
T ss_pred CccHHHHHHHHHHHhc---CCCeEEEEecCchHHHHHHHHHhc--------CCCC-EEEEcCCcHHHHHHHHHHcCCeEE
Confidence 5567777778888887 555667665 55566677766653 2234 455678999998888887774 44
Q ss_pred ccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEE---EEEEccccCCCCCccCChhHHHH
Q 013204 153 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIA---AFIAEPVIGAGGVIPPPATYFEK 229 (447)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a---~vi~epv~~~~G~~~~~~~~l~~ 229 (447)
|..+-+........++. +.+. .+.+++.+.+.. +..+ ++|+.|.+ .|.... +++
T Consensus 132 yi~p~~~~~gi~~~i~~-------------~~~~---~~~i~~~l~~~p-~~k~~~~vvlt~PTY--~Gv~~d----i~~ 188 (417)
T PF01276_consen 132 YIPPEDNEYGIIGGISP-------------DEFN---EEDIEEALKEHP-DAKAPRLVVLTSPTY--YGVCYD----IKE 188 (417)
T ss_dssp EEEEEE-TTS-BEEB-G-------------GGGS---HHHHHHHHHHCT-TCHCESEEEEESS-T--TSEEE-----HHH
T ss_pred EecCCccccCCccCCCh-------------hhhh---HHHHHHHHHhCc-cccCceEEEEeCCCC--CeEEEC----HHH
Confidence 43322111111111111 1111 267788887643 3333 66666654 244444 999
Q ss_pred HHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCC-------eeeec--ccCCCcccceeEEEeChh--H-HHHhhh
Q 013204 230 VQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD-------LVSFA--KALSSAYMPIGAILVSPE--V-SEVIHS 297 (447)
Q Consensus 230 l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d-------~v~~s--K~l~gg~~~~g~~~~~~~--~-~~~~~~ 297 (447)
|.++|++++++|++||+|.+.-.-. .+......+..| +++-| |.+++- -..+.+-.+.+ + .+.+..
T Consensus 189 I~~~~h~~~~~llvDEAhGah~~F~-~lp~~a~~~gad~~~~~~~~vvqS~HKtL~al-tQts~lh~~~~~~v~~~~~~~ 266 (417)
T PF01276_consen 189 IAEICHKHGIPLLVDEAHGAHFGFH-PLPRSALALGADRPNDPGIIVVQSTHKTLPAL-TQTSMLHVKGDRIVDHERVNE 266 (417)
T ss_dssp HHHHHCCTECEEEEE-TT-TTGGCS-GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS--TT-EEEEEETCCCTTHHHHHH
T ss_pred HHHHhcccCCEEEEEccccccccCC-CCccchhhccCccccccceeeeechhhccccc-ccceEEEecCCCcccHHHHHH
Confidence 9999999999999999986432222 222233445567 88777 766552 23455544333 2 233332
Q ss_pred ccCCCCccCcCCCCCCcHHHHHHHHHHHHHH-h--hhcHHHHHHHHHHHHHHhHhhc
Q 013204 298 QSNTLGSFSHGFTYSGHPVSCAVAIEALKIY-K--ERNIVEQVNKIAPKFQDGVKAF 351 (447)
Q Consensus 298 ~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~-~--~~~~~~~~~~~~~~l~~~L~~l 351 (447)
.+....|.+++-+-++..-.+.+.+ . -.++.++..++.+.+|+.++++
T Consensus 267 ------~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~ 317 (417)
T PF01276_consen 267 ------ALSMHQTTSPSYPLMASLDVARAQMEEEEGRELLEEAIELAEEFRKKINRL 317 (417)
T ss_dssp ------HHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 1222235555555555544555555 2 2446778888888899988543
No 362
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.00 E-value=5.9e-08 Score=92.80 Aligned_cols=239 Identities=18% Similarity=0.186 Sum_probs=133.7
Q ss_pred ChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccC
Q 013204 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 155 (447)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 155 (447)
++-...|++.++++= +-+.++.++||..|+.+++.... +.+++|+..+..|.|.....-..- +
T Consensus 62 nPT~~~lE~~~a~LE---g~~~~~afsSGmaAI~~~~l~ll--------~~GD~vl~~~~~YG~t~~~~~~~l------~ 124 (396)
T COG0626 62 NPTRDALEEALAELE---GGEDAFAFSSGMAAISTALLALL--------KAGDHVLLPDDLYGGTYRLFEKIL------Q 124 (396)
T ss_pred CccHHHHHHHHHHhh---CCCcEEEecCcHHHHHHHHHHhc--------CCCCEEEecCCccchHHHHHHHHH------H
Confidence 455677888888872 55678999999999999887664 335889998888977632221100 0
Q ss_pred CCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHH
Q 013204 156 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 235 (447)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~ 235 (447)
.+++. +..++..+ .+.+++.+. ++++.+|.+|+.-+..--++. +++|+++|+
T Consensus 125 ~~gi~---~~~~d~~~------------------~~~~~~~~~---~~~tk~v~lEtPsNP~l~v~D----I~~i~~~A~ 176 (396)
T COG0626 125 KFGVE---VTFVDPGD------------------DEALEAAIK---EPNTKLVFLETPSNPLLEVPD----IPAIARLAK 176 (396)
T ss_pred hcCeE---EEEECCCC------------------hHHHHHHhc---ccCceEEEEeCCCCccccccc----HHHHHHHHH
Confidence 01111 01111100 134444443 246788899887555544444 999999999
Q ss_pred hcCCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccce-eEEEeCh-hHHHHhhhccCCCCccCcCCCC
Q 013204 236 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSP-EVSEVIHSQSNTLGSFSHGFTY 311 (447)
Q Consensus 236 ~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~-g~~~~~~-~~~~~~~~~~~~~~~~~~~~t~ 311 (447)
++|+++|+|.+.... ..++-+..-.|+++ ..|-++|..=-+ |.++++. ++.+.+... .... .-.
T Consensus 177 ~~g~~vvVDNTfatP------~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~-----~~~~-~G~ 244 (396)
T COG0626 177 AYGALVVVDNTFATP------VLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFA-----QRAN-TGA 244 (396)
T ss_pred hcCCEEEEECCcccc------cccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHH-----HHhh-cCC
Confidence 999999999987521 22333344478886 458888732222 3455454 455544211 0000 112
Q ss_pred CCcHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhccC-----CCce----------eeEeeeeeEEEEEeec
Q 013204 312 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPII----------GEIRGTGLILGTEFAD 373 (447)
Q Consensus 312 ~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~----------~~~~~~g~~~~i~~~~ 373 (447)
...|..+.-.+..++-+. -..++..++...+.+.|++-+. +|.. ....+.|.++.+.+..
T Consensus 245 ~l~p~dA~l~lRGlkTL~--~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~ 319 (396)
T COG0626 245 VLSPFDAWLLLRGLRTLA--LRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN 319 (396)
T ss_pred CCCHHHHHHHHhccchHH--HHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC
Confidence 234555544444444221 1134444455555555554211 1110 0123578888888876
No 363
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.00 E-value=5.2e-08 Score=94.30 Aligned_cols=242 Identities=22% Similarity=0.198 Sum_probs=133.2
Q ss_pred HHHHHHHHHhcCcC------CCCeEEEeCChhhHHHHHHHHHHHHHH----hcCCC-CcceEEEEcCCCccchhhhhccc
Q 013204 80 LDLAKELLEMFTAS------KMAKVFFTNSGSEANDTQVKLVWYYNN----ALGRP-NKKKFIARQKSYHGSTLIAASLS 148 (447)
Q Consensus 80 ~~l~~~l~~~~~~~------~~~~v~~~~sGseA~~~Al~~~~~~~~----~~~~~-~~~~vi~~~~~yhg~~~~~~~~~ 148 (447)
.++.+++++++... +...-+|++|||+||..|+..+|.... ..+.. ..+.+++.+..-|-+..-+...-
T Consensus 82 ~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~l 161 (373)
T PF00282_consen 82 REVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARIL 161 (373)
T ss_dssp HHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHT
T ss_pred HHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhccee
Confidence 34445556555322 124688999999999999998875432 12211 23456777777787765555544
Q ss_pred CCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhC-CC-cEEEEEEccccCCCCCccCChhH
Q 013204 149 GLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG-PE-TIAAFIAEPVIGAGGVIPPPATY 226 (447)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~-~~-~~a~vi~epv~~~~G~~~~~~~~ 226 (447)
|.. +..+++.+.++ .+.++|++.+.+.. .. .+.+|+........|.+-+
T Consensus 162 Glg------------~~~I~~~~~~~-------------md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~---- 212 (373)
T PF00282_consen 162 GLG------------VRKIPTDEDGR-------------MDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP---- 212 (373)
T ss_dssp TSE------------EEEE-BBTTSS-------------B-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S----
T ss_pred eeE------------EEEecCCcchh-------------hhHHHhhhhhcccccccccceeeeccCCCcccccccC----
Confidence 433 23333322211 11477888776532 22 3435555555555677765
Q ss_pred HHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCC-CCCeeeec--ccCCCcccceeEEEeChh-HHH-HhhhccCC
Q 013204 227 FEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSFA--KALSSAYMPIGAILVSPE-VSE-VIHSQSNT 301 (447)
Q Consensus 227 l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~-~~d~v~~s--K~l~gg~~~~g~~~~~~~-~~~-~~~~~~~~ 301 (447)
+++|.++|++|++++++|.++.|....-+..-.-..++ ..|-++++ |.+..+ ++.|+++.+.+ ... .+......
T Consensus 213 l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P-~~~~~~l~r~~~~l~~~~~~~~~Y 291 (373)
T PF00282_consen 213 LEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVP-YGCGVLLVRDKSDLRDAFSINADY 291 (373)
T ss_dssp HHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-S-SS-EEEEESSGGGHHGGGEEEETC
T ss_pred HHHHhhhccccceeeeecccccccccccccccccccccccccccccchhhhhcCC-ccceeEEeecccchHHHhccChhh
Confidence 99999999999999999999887322211111122344 36777765 888777 68899888764 333 33211111
Q ss_pred CCcc---------CcCCCCCCc-HHHHHHHHHHHHHHhhhcHHH---HHHHHHHHHHHhHhhc
Q 013204 302 LGSF---------SHGFTYSGH-PVSCAVAIEALKIYKERNIVE---QVNKIAPKFQDGVKAF 351 (447)
Q Consensus 302 ~~~~---------~~~~t~~~~-~~~~~aa~a~l~~~~~~~~~~---~~~~~~~~l~~~L~~l 351 (447)
.... ....+...+ .......+.+++.+..+++.+ +..++.+++++.|++.
T Consensus 292 l~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~ 354 (373)
T PF00282_consen 292 LGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKD 354 (373)
T ss_dssp TT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred hcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 1100 000122212 345556667777766666554 4445666777777665
No 364
>PRK15029 arginine decarboxylase; Provisional
Probab=98.99 E-value=1.5e-07 Score=97.49 Aligned_cols=316 Identities=13% Similarity=0.088 Sum_probs=159.3
Q ss_pred hHHHHHHHHHHHhcCcCCCCeEEEe-CChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCC-cccc
Q 013204 77 KPSLDLAKELLEMFTASKMAKVFFT-NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALH 154 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~~v~~~-~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~-~~~~ 154 (447)
....+-.+..++.| +.++.+|. ||.|.+|.+++..+. ++ ...|.++.+.|-+.+.++.++|. |.|.
T Consensus 205 G~I~eAq~~aA~~f---gA~~t~FlvNGST~gn~a~i~a~~--------~~-gd~Vlv~RN~HKSv~~al~L~ga~Pvyl 272 (755)
T PRK15029 205 GAFGESEKYAARVF---GADRSWSVVVGTSGSNRTIMQACM--------TD-NDVVVVDRNCHKSIEQGLILTGAKPVYM 272 (755)
T ss_pred cHHHHHHHHHHHHh---CCCcEEEEeCChhHHHHHHHHHhc--------CC-CCEEEeecccHHHHHHHHHHcCCeEEEe
Confidence 34445555666665 34455555 455556666665543 22 33455688999998888888875 4443
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCC-------CcEEEEEEccccCCCCCccCChhHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP-------ETIAAFIAEPVIGAGGVIPPPATYF 227 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~-------~~~a~vi~epv~~~~G~~~~~~~~l 227 (447)
.+-.........+ +.+.+ ..+.+++.+.+... +..++|++.|.+- |.... +
T Consensus 273 ~P~~~~~Gi~~~i-------------~~~~~---~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~--Gv~~d----i 330 (755)
T PRK15029 273 VPSRNRYGIIGPI-------------YPQEM---QPETLQKKISESPLTKDKAGQKPSYCVVTNCTYD--GVCYN----A 330 (755)
T ss_pred cccccccCCccCC-------------Ccccc---CHHHHHHHHHhCchhhhccccCceEEEEECCCCc--ceeeC----H
Confidence 2211000000000 00000 02667777654321 1125666666542 43333 8
Q ss_pred HHHHHHHHhcCCEEEEehhhcCCCcccccccc-ccC-----C-CCCC-eeeec--ccCCCcccceeEEEeChh---H-HH
Q 013204 228 EKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKY-----S-IKPD-LVSFA--KALSSAYMPIGAILVSPE---V-SE 293 (447)
Q Consensus 228 ~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~-~~~-----~-~~~d-~v~~s--K~l~gg~~~~g~~~~~~~---~-~~ 293 (447)
+.|.++|+++|++|++||+|.+....+..+.. ... . .-+| +++-| |.+++- -..+.+-.+.. + .+
T Consensus 331 ~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~al-TQaS~LHv~~~~~~id~~ 409 (755)
T PRK15029 331 KEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNAL-SQASYIHVREGRGAINFS 409 (755)
T ss_pred HHHHHHHHhcCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhcccch-hhhhhheeCCCccccCHH
Confidence 99999999999999999998754322222211 111 1 2378 66656 655431 11223323211 1 12
Q ss_pred HhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHhHhhccC------CCce-------
Q 013204 294 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSD------SPII------- 357 (447)
Q Consensus 294 ~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~------~~~~------- 357 (447)
.++. .+....|.+++-+-++..-.+...++. .++.++..+....+|+.+.++.. ..++
T Consensus 410 r~~~------~l~~~qSTSPSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~ 483 (755)
T PRK15029 410 RFNQ------AYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEV 483 (755)
T ss_pred HHHH------HHHHHcCCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccc
Confidence 2321 122223445554444444444444442 34566677777788888876622 0000
Q ss_pred -------------------------eeEeee-----e------eE-------EEEEeecCCCCCCCCCCCcchHHHHHHH
Q 013204 358 -------------------------GEIRGT-----G------LI-------LGTEFADNKSPNEPFPPEWGIGAYFGAQ 394 (447)
Q Consensus 358 -------------------------~~~~~~-----g------~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (447)
..+-+. | .+ +.|.......+ ..+.....-+..+.+.
T Consensus 484 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~s-G~~~~~gip~~~l~~~ 562 (755)
T PRK15029 484 VTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGED-GELEETGVPAALVTAW 562 (755)
T ss_pred cccccccccccccccchhhhccccceeeecccccccCcccccccccccCCceEEEEcCCCCCC-CcccccCCcHHHHHHH
Confidence 000000 0 00 00111000000 0000000012357788
Q ss_pred HHHcCceEEeeC-CEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 395 CEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 395 l~~~Gi~~~~~g-~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
|.++||.+--.+ ..+-+..+...|++++++++++|.+..+
T Consensus 563 L~~~gI~~E~~~~~~vL~l~s~g~t~~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 563 LGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_pred HHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 888999988665 4566666678999999999999887644
No 365
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.95 E-value=5.2e-06 Score=76.23 Aligned_cols=355 Identities=16% Similarity=0.199 Sum_probs=185.4
Q ss_pred CCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHH
Q 013204 30 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 109 (447)
Q Consensus 30 ~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~ 109 (447)
..+..++|+....|+... ..+--.+|.. +.-.++ -+...-.|++...+.+ +.+.++-+.-|--|-.
T Consensus 43 ~Sedv~IDLLTDSGTgam---s~~qwaamm~----GDEAYa----gsrs~~~L~~avkdif---Gfq~~iPthQGRgAE~ 108 (471)
T COG3033 43 DSEDVFIDLLTDSGTGAM---TDKQWAAMMR----GDEAYA----GSRSYYALADAVKDIF---GFQYTIPTHQGRGAEN 108 (471)
T ss_pred cccceEEEeeccCCcccc---cHHHHHHHhc----cchhhc----ccccHHHHHHHHHHhc---CceeeeeccCCccHHH
Confidence 445689999866544321 1222223322 222111 2334667888999987 5677888877766665
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 189 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (447)
..+..+.+.. -.-+.++.++|++.|.-.+-+-....|.....-. .+......++.| |+ +..+
T Consensus 109 Il~~i~ik~~---~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~--~~ea~d~~~~~p--FK-----------Gd~D 170 (471)
T COG3033 109 ILIPILIKKG---EQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVY--VDEAFDTEVKYP--FK-----------GNFD 170 (471)
T ss_pred HHHHHHhhhc---cccCCccccccccceecchhHHHHhcCCcccccc--ccccccccccCC--CC-----------CccC
Confidence 5555444321 1122366777776665555444443332211110 111111111111 11 1223
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccccccc------CC
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK------YS 263 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~------~~ 263 (447)
++-|++++...+++.++-|+..-.+++.|..+.+-.-++++.++|++|++.+++|.+.. .... .|..+. +.
T Consensus 171 ~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~Rf--aENa-YFIk~rE~gYrd~s 247 (471)
T COG3033 171 LEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARF--AENA-YFIKQREPGYRDWS 247 (471)
T ss_pred HHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhh--hhhh-hhhhhcCccccccc
Confidence 68899999888887776665555455545577888899999999999999999997642 1111 111111 11
Q ss_pred C---------CCCeeeec-c--cCCCccccee-EEEeChh----HHHHhhhccCCCCccCc-CCCCCCc-HHHHHHHHHH
Q 013204 264 I---------KPDLVSFA-K--ALSSAYMPIG-AILVSPE----VSEVIHSQSNTLGSFSH-GFTYSGH-PVSCAVAIEA 324 (447)
Q Consensus 264 ~---------~~d~v~~s-K--~l~gg~~~~g-~~~~~~~----~~~~~~~~~~~~~~~~~-~~t~~~~-~~~~~aa~a~ 324 (447)
+ -.|-.++| | ++. .+| +++.+.+ +....... ..... ..|+++- --.+.+....
T Consensus 248 I~~IarEm~sYaD~~~mS~KKD~lv----nmGGfl~~~D~~~fDvy~~~~~~----~V~~eG~~tYGgl~GrdmealAvG 319 (471)
T COG3033 248 IEEIAREMYSYADGCTMSAKKDGLV----NMGGFLCFKDDSFFDVYEECRTL----VVVQEGFPTYGGLAGRDMEALAVG 319 (471)
T ss_pred HHHHHHHHHhhhhhheeecccccee----ccccEEEecCccHHHHHHHHHhh----eEeeccccccCcccchhHHHHHHH
Confidence 1 13444555 4 443 333 4555655 33333211 01111 1233221 1112222233
Q ss_pred HHHHhhhcHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeec--CCCCCCCCCCCcchHHHHHHH-HHHcCce
Q 013204 325 LKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFAD--NKSPNEPFPPEWGIGAYFGAQ-CEKHGML 401 (447)
Q Consensus 325 l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~ 401 (447)
|....+.+++++.-+..++|.+.|.+. +.|++..+-|.+.++ +... +..+.+.|+ ++.|.-. -++.||-
T Consensus 320 L~e~~~~~yl~~Rv~Qv~YL~~~l~~~-GVpi~~paGGHavfv--da~~~lphip~eqFp-----aqala~ely~e~GiR 391 (471)
T COG3033 320 LREGVNFDYLAHRVAQVQYLADGLEEA-GVPIVQPAGGHAVFV--DAGKFLPHIPAEQFP-----AQALACELYKEAGIR 391 (471)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHHhc-CCeeEecCCCceEEe--ehhhhcCCCChhhCc-----HHHHHHHHHHHhCee
Confidence 443334566666666678899999886 555555554444333 2211 111222233 2333333 3455665
Q ss_pred EEeeC------------------CEEEEecCCC-CCHHHHHHHHHHHHHHHHH
Q 013204 402 VRVSG------------------DNIMMSPPFI-MSPEEVDELISKYGKALKA 435 (447)
Q Consensus 402 ~~~~g------------------~~iR~~~~~~-~t~e~i~~~~~~l~~~l~~ 435 (447)
....| +.+|++.|-. -|.+++|..++.+++..+.
T Consensus 392 avElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 392 AVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred eeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence 54221 5689998744 5999999999999888764
No 366
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.95 E-value=1.8e-07 Score=99.93 Aligned_cols=284 Identities=12% Similarity=0.133 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCC-cceEEEEcCCCccchhhhhcccCCccccCC
Q 013204 78 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPN-KKKFIARQKSYHGSTLIAASLSGLPALHQK 156 (447)
Q Consensus 78 ~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 156 (447)
...++...++++. +-+..++.+..++|.+.++++...+ .+ ++ +++|++.+..| ..+...+.... ..
T Consensus 122 al~~~Qt~la~Lt-G~~~anaSl~d~aTAa~ea~~~a~~-~~-----~~~~~~vlv~~~~h-P~~~~v~~t~a-----~~ 188 (954)
T PRK05367 122 ALLNFQTMVADLT-GLEIANASLLDEATAAAEAMALAKR-VS-----KSKSNRFFVDDDVH-PQTLDVLRTRA-----EP 188 (954)
T ss_pred HHHHHHHHHHHHH-CCChhhccccccHHHHHHHHHHhhh-hc-----cCCCCEEEEcCccC-HHHHHHHHHHH-----Hh
Confidence 3345666777775 3455678999999999996665432 21 11 35676655544 44333221100 00
Q ss_pred CCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHh
Q 013204 157 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK 236 (447)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~ 236 (447)
.++ .+..++.+ ++++ +++++++++.- .+..|.+.+ +++|.++|++
T Consensus 189 ~G~---ev~~~~~~--------------------~d~~-------~~~~~~vlvq~-p~~~G~i~d----~~~i~~~ah~ 233 (954)
T PRK05367 189 LGI---EVVVGDAA--------------------KALD-------HDDVFGVLLQY-PGTSGEVRD----YTALIAAAHA 233 (954)
T ss_pred CCC---EEEEecCc--------------------cCCC-------cccEEEEEEec-CCCCeeecc----HHHHHHHHHH
Confidence 010 01111211 1111 23566665544 455566765 9999999999
Q ss_pred cCCEEEEehhhcCCCccccccccccCCCCCCeeeec--c---cCCCcccceeEEEeChhHHHHhhhc--c---C--CCCc
Q 013204 237 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--K---ALSSAYMPIGAILVSPEVSEVIHSQ--S---N--TLGS 304 (447)
Q Consensus 237 ~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K---~l~gg~~~~g~~~~~~~~~~~~~~~--~---~--~~~~ 304 (447)
+|+++++|-.+..++..-.+ -.+-.|+++.+ | .++.|+...|++..++++.+.+... . . ....
T Consensus 234 ~Gal~~vda~~~Al~~l~~p-----ge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~ 308 (954)
T PRK05367 234 RGALVAVAADLLALTLLTPP-----GEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPA 308 (954)
T ss_pred cCCEEEEEehhhhccCCCCh-----hhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcc
Confidence 99999999765322111111 12346888653 3 2343446789999999987766321 0 0 0000
Q ss_pred c------------CcCCCCC-CcHHHHHHHHHH--HHHHhhh---cHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeE
Q 013204 305 F------------SHGFTYS-GHPVSCAVAIEA--LKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 366 (447)
Q Consensus 305 ~------------~~~~t~~-~~~~~~~aa~a~--l~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~ 366 (447)
+ ....|.. ....++.+..++ +..+... ++.+++..+..++++.|++. +..+... .....
T Consensus 309 ~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~~~--~~f~~ 385 (954)
T PRK05367 309 LRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL-GLEVVHD--SFFDT 385 (954)
T ss_pred cccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc-CcccCCC--CCCCe
Confidence 0 0001111 111122222222 2333333 34567777888888888663 2222211 11111
Q ss_pred EEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-CCEEEEecCCCCCHHHHHHHHHHHH
Q 013204 367 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMMSPPFIMSPEEVDELISKYG 430 (447)
Q Consensus 367 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-g~~iR~~~~~~~t~e~i~~~~~~l~ 430 (447)
+.+.+. . ....+.++|+++||.+... ++.+|++|+...|++||+++++.|.
T Consensus 386 ~~~~~~--~-----------~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 386 LTVEVG--G-----------DAAAVLARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred EEEeCC--C-----------CHHHHHHHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 122221 1 1456889999999999765 4679999999999999999999997
No 367
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.88 E-value=1.3e-06 Score=89.77 Aligned_cols=316 Identities=13% Similarity=0.092 Sum_probs=154.0
Q ss_pred hHHHHHHHHHHHhcCcCCCCeEEEe-CChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhh-hhcccCC-ccc
Q 013204 77 KPSLDLAKELLEMFTASKMAKVFFT-NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI-AASLSGL-PAL 153 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~~v~~~-~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~-~~~~~~~-~~~ 153 (447)
....+-.+..++.| +.++.+|. ||.|.+|.+++..+. + +...|.++.+.|-+... ++..+|. |.|
T Consensus 174 G~i~eAq~~AA~~f---gAd~tyFlvNGTS~gn~a~i~a~~--------~-~Gd~VLvdRN~HKSv~hgaLiLsGa~PVY 241 (720)
T PRK13578 174 GAAKDAQKHAAKVF---NADKTYFVLNGTSASNKVVTNALL--------T-PGDLVLFDRNNHKSNHHGALIQAGATPVY 241 (720)
T ss_pred hHHHHHHHHHHHHh---CCCceEEEeCChhHHHHHHHHHhc--------C-CCCEEEeecccHHHHHHHHHHHcCCeEEE
Confidence 34445555666665 34455555 555666666666553 2 23455678899999775 3666664 555
Q ss_pred cCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCC-------cEEEEEEccccCCCCCccCChhH
Q 013204 154 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPE-------TIAAFIAEPVIGAGGVIPPPATY 226 (447)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~-------~~a~vi~epv~~~~G~~~~~~~~ 226 (447)
..+-.........+ +.+.+. .+.+++.+.+..++ -.++||..|.+ .|....
T Consensus 242 l~P~~n~~Gi~g~I-------------~~~~~~---~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY--dG~~yd---- 299 (720)
T PRK13578 242 LETARNPFGFIGGI-------------DAHCFD---EEYLREQIREVAPERADEARPFRLAVIQLGTY--DGTIYN---- 299 (720)
T ss_pred eeccccccCCcCCC-------------ChHHcc---HHHHHHHHHhcCccccccccCceEEEEECCCC--cceeec----
Confidence 43221111111111 111111 15577777654222 24466666653 243333
Q ss_pred HHHHHHH-HHhcCCEEEEehhhcCCCccccc---cccccCCCCCC----eeeec--ccCCCcccceeEEEeChhH-----
Q 013204 227 FEKVQAV-VKKYDILFIADEVICAFGRLGTM---FGCDKYSIKPD----LVSFA--KALSSAYMPIGAILVSPEV----- 291 (447)
Q Consensus 227 l~~l~~l-~~~~g~~li~DEv~~g~g~~g~~---~~~~~~~~~~d----~v~~s--K~l~gg~~~~g~~~~~~~~----- 291 (447)
++.|.++ |+.++ +|++||++.+.-.-... +.-......+| +++=| |-+++= -..+.+-.+.+.
T Consensus 300 i~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~al-TQaS~LHvk~~~i~g~~ 377 (720)
T PRK13578 300 ARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGF-SQTSQIHKKDNHIKGQA 377 (720)
T ss_pred HHHHHHHhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhh-hhHhhhhcCCccccccc
Confidence 8899998 78888 99999998754322221 11011223466 66666 655431 122333232211
Q ss_pred ----HHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHhH-hhccCCCcee--eE-
Q 013204 292 ----SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGV-KAFSDSPIIG--EI- 360 (447)
Q Consensus 292 ----~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~---~~~~~~~~~~~~~l~~~L-~~l~~~~~~~--~~- 360 (447)
.+.++. .+....|.+++-+-+++.-.+-..++. ..+.+...+....+|+.+ +.+....... .+
T Consensus 378 ~~v~~~r~~~------al~m~qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~ 451 (720)
T PRK13578 378 RYCPHKRLNN------AFMLHASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVD 451 (720)
T ss_pred ccCCHHHHHH------HHHHHcCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeeccccccc
Confidence 122221 112222334333333322222333332 345667777777788777 4433221110 00
Q ss_pred ---------------------------eeeee------E-----EEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceE
Q 013204 361 ---------------------------RGTGL------I-----LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV 402 (447)
Q Consensus 361 ---------------------------~~~g~------~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~ 402 (447)
+|... + +.|....-......+.....-+..+.+.|.++||.+
T Consensus 452 ~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~ 531 (720)
T PRK13578 452 GKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVP 531 (720)
T ss_pred ccccccCchhhhcccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEE
Confidence 00000 0 001110000000000000001456778887889998
Q ss_pred EeeC-CEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 403 RVSG-DNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 403 ~~~g-~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
.-.+ ..+-+..+...|++++++++++|.+.-+
T Consensus 532 E~~d~~~vL~l~s~g~t~~~~~~Lv~aL~~f~~ 564 (720)
T PRK13578 532 EKCDLNSILFLLTPAEDMAKLQQLVAMLARFEK 564 (720)
T ss_pred EecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 8765 4566666678999999999999987644
No 368
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.87 E-value=2.8e-06 Score=87.23 Aligned_cols=311 Identities=14% Similarity=0.158 Sum_probs=158.9
Q ss_pred HHHHHHHHHHHhcCcCCCCeEEEeCCh-hhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCC-ccccC
Q 013204 78 PSLDLAKELLEMFTASKMAKVFFTNSG-SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQ 155 (447)
Q Consensus 78 ~~~~l~~~l~~~~~~~~~~~v~~~~sG-seA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~-~~~~~ 155 (447)
...+-++..++.| +.++.+|..+| |.+|.+++..+. + +...|.++.+.|-+...++..+|. |.|..
T Consensus 196 ~i~eAe~~aA~~f---gAd~tyfvvNGTS~~n~av~~a~~--------~-~Gd~VLvdRN~HKSv~~aLilsga~PVYl~ 263 (713)
T PRK15399 196 PHLEAEEYIARTF---GAEQSYIVTNGTSTSNKIVGMYAA--------P-AGSTLLIDRNCHKSLAHLLMMSDVVPIWLK 263 (713)
T ss_pred HHHHHHHHHHHHh---CCCcEEEEeCChHHHHHHHHHHhc--------C-CCCEEEeecccHHHHHHHHHHcCCeeEEec
Confidence 3445555666665 44566666555 667777776653 2 334555788999998778877774 55543
Q ss_pred CCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCC--cEEEEEEccccCCCCCccCChhHHHHHHHH
Q 013204 156 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPE--TIAAFIAEPVIGAGGVIPPPATYFEKVQAV 233 (447)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~--~~a~vi~epv~~~~G~~~~~~~~l~~l~~l 233 (447)
+-.........+ +.+.+. .+.+++.+.+.... ..++||..|.+ .|.... ++.|.++
T Consensus 264 P~~n~~Gi~g~I-------------~~~~~~---~e~I~~~i~~~p~~~~p~~vvit~pTY--dGi~yd----~~~I~~~ 321 (713)
T PRK15399 264 PTRNALGILGGI-------------PRREFT---RDSIEEKVAATTQAQWPVHAVITNSTY--DGLLYN----TDWIKQT 321 (713)
T ss_pred ccccccCCcCCC-------------Chhhcc---HHHHHHHHHhCCCcCCceEEEEECCCC--CceeeC----HHHHHHH
Confidence 221111111111 111111 26677777654321 14677776643 343433 7778887
Q ss_pred HHhcCCEE-EEehhhcCCCccccc----cccccCCCCCCee---eec--ccCCCcccceeEEEeChhH-HHHhhhccCCC
Q 013204 234 VKKYDILF-IADEVICAFGRLGTM----FGCDKYSIKPDLV---SFA--KALSSAYMPIGAILVSPEV-SEVIHSQSNTL 302 (447)
Q Consensus 234 ~~~~g~~l-i~DEv~~g~g~~g~~----~~~~~~~~~~d~v---~~s--K~l~gg~~~~g~~~~~~~~-~~~~~~~~~~~ 302 (447)
| |+.+ ++||++.+.-.-... .+.. .+-.+|.+ +-| |-+++= -..+.+-.+..+ .+.++.
T Consensus 322 ~---g~~~ilvDEAhgah~~F~p~~~~~sam~-~~~~aD~~i~~tQStHKtL~al-TQaS~iHvk~~vd~~~~n~----- 391 (713)
T PRK15399 322 L---DVPSIHFDSAWVPYTHFHPIYQGKSGMS-GERVPGKVIFETQSTHKMLAAF-SQASLIHIKGEYDEETFNE----- 391 (713)
T ss_pred h---CCCEEEEeccchhhhhcCcccCCcChhh-CCCCCCeeeeeeeehhcccccc-chheeeeecCCCCHHHHHH-----
Confidence 7 6777 599998754322221 1111 11146766 444 655541 233444343322 122221
Q ss_pred CccCcCCCCCCcHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHhHhhccC------CCceee--E-----------
Q 013204 303 GSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSD------SPIIGE--I----------- 360 (447)
Q Consensus 303 ~~~~~~~t~~~~~~~~~aa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~------~~~~~~--~----------- 360 (447)
.+....|.+++-+-+++.-.+...++. ..+.+...+....+|+.+.++.+ +.+... +
T Consensus 392 -a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~ 470 (713)
T PRK15399 392 -AFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPG 470 (713)
T ss_pred -HHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCC
Confidence 222223444444444433344444432 34667777788888888876522 111000 0
Q ss_pred ---eeeee------E-----EEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEEEecCCCCCHHHHHHH
Q 013204 361 ---RGTGL------I-----LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDEL 425 (447)
Q Consensus 361 ---~~~g~------~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR~~~~~~~t~e~i~~~ 425 (447)
+|... + +.+..+.-. ....+.....-+..+.+.|.++||.+.-.+ ..+-+..+...|+++++++
T Consensus 471 ~~whgf~~~~~~~~~lDP~KltI~t~g~~-~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~L 549 (713)
T PRK15399 471 EQWHGFKDADADHMFLDPVKVTILTPGMD-EQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGL 549 (713)
T ss_pred cccccccccccccccCCCceEEEEecCcc-cccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHH
Confidence 00000 0 001111000 000000111124567788999999988765 4566776788999999999
Q ss_pred HHHHHHHHH
Q 013204 426 ISKYGKALK 434 (447)
Q Consensus 426 ~~~l~~~l~ 434 (447)
+++|.+.-+
T Consensus 550 ~~aL~~f~~ 558 (713)
T PRK15399 550 LRGLTEFKR 558 (713)
T ss_pred HHHHHHHHH
Confidence 998887633
No 369
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.76 E-value=4.1e-06 Score=86.11 Aligned_cols=308 Identities=14% Similarity=0.138 Sum_probs=157.6
Q ss_pred hHHHHHHHHHHHhcCcCCCCeEEEeCCh-hhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCC-cccc
Q 013204 77 KPSLDLAKELLEMFTASKMAKVFFTNSG-SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALH 154 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~~v~~~~sG-seA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~-~~~~ 154 (447)
....+-.+..++.| +.++.+|..+| |.+|.+++..+. + +...|.++.+.|-+...++..+|. |.|.
T Consensus 195 G~i~eAe~~AA~~f---gAd~tyfvvNGTS~~n~av~~a~~--------~-~Gd~VLvdRN~HKSv~haLilsga~PVYl 262 (714)
T PRK15400 195 GPHKEAEEYIARVF---NADRSYMVTNGTSTANKIVGMYSA--------P-AGSTVLIDRNCHKSLTHLMMMSDVTPIYF 262 (714)
T ss_pred hHHHHHHHHHHHHh---CCCcEEEEeCchHHHHHHHHHHhc--------C-CCCEEEeecccHHHHHHHHHHcCCeEEEe
Confidence 34455556666665 45566666555 667776666553 2 334556789999998778887774 5554
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCC--cEEEEEEccccCCCCCccCChhHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPE--TIAAFIAEPVIGAGGVIPPPATYFEKVQA 232 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~--~~a~vi~epv~~~~G~~~~~~~~l~~l~~ 232 (447)
.+-.........++. +.+. .+.+++.+.+.... ..++||..|.+ .|.... ++.|.+
T Consensus 263 ~P~rn~~Gi~g~I~~-------------~~~~---~e~i~~~i~~~p~ak~p~~~vit~pTY--dG~~yd----~~~I~~ 320 (714)
T PRK15400 263 RPTRNAYGILGGIPQ-------------SEFQ---HATIAKRVKETPNATWPVHAVITNSTY--DGLLYN----TDFIKK 320 (714)
T ss_pred cccccccCCccCCCc-------------cccC---HHHHHHHHHhCccccCccEEEEECCCC--ccEecC----HHHHHH
Confidence 322111111111110 0110 26677777654221 12577777743 244433 889999
Q ss_pred HHHhcCCEEEEehhhcCCCcccccc----ccccCCCCC-C--eeeec--ccCCCcccceeEEEe----C-hhHHHHhhhc
Q 013204 233 VVKKYDILFIADEVICAFGRLGTMF----GCDKYSIKP-D--LVSFA--KALSSAYMPIGAILV----S-PEVSEVIHSQ 298 (447)
Q Consensus 233 l~~~~g~~li~DEv~~g~g~~g~~~----~~~~~~~~~-d--~v~~s--K~l~gg~~~~g~~~~----~-~~~~~~~~~~ 298 (447)
+|+.++ +++||++.+.-.-...+ +.. .+-.+ | +++=| |-+++= -..+.+-. + +.+.+.+.
T Consensus 321 ~~~~~~--ilvDEAwgah~~F~p~~~~~sam~-~ga~~~~~i~vtQStHKtL~al-TQaS~LHvkg~vd~~~~n~a~~-- 394 (714)
T PRK15400 321 TLDVKS--IHFDSAWVPYTNFSPIYEGKCGMS-GGRVEGKVIYETQSTHKLLAAF-SQASMIHVKGDVNEETFNEAYM-- 394 (714)
T ss_pred HhCCCC--EEEEccchhhhccCcccCCcChhh-cCCCCCCceEEEEchhhcccch-hHHhHHHHcCCCCHHHHHHHHH--
Confidence 998887 68999987553222211 111 12111 3 55555 655431 11122111 2 22333332
Q ss_pred cCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHhHhhccC------CCcee-e-E-------
Q 013204 299 SNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSD------SPIIG-E-I------- 360 (447)
Q Consensus 299 ~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~------~~~~~-~-~------- 360 (447)
...|.+++-+-+++.-.+...++. ..+.+...+....+|+.+.++.. ..+.. + +
T Consensus 395 --------m~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~ 466 (714)
T PRK15400 395 --------MHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWP 466 (714)
T ss_pred --------HHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcc
Confidence 223444443334433344444432 34667777788888888877632 11100 0 0
Q ss_pred -------eeeeeE-----------EEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEEEecCCCCCHHH
Q 013204 361 -------RGTGLI-----------LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEE 421 (447)
Q Consensus 361 -------~~~g~~-----------~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR~~~~~~~t~e~ 421 (447)
+|...+ +.+..+... ....+.....-+..+.+.|.++||.+.-.+ ..+-+..+...|+++
T Consensus 467 ~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~-~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~ 545 (714)
T PRK15400 467 LRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMK-KDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTK 545 (714)
T ss_pred cCccccccCcccccccccccCCceEEEEeCCCC-CCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHH
Confidence 000000 001111100 000000011114457788899999988765 457777778999999
Q ss_pred HHHHHHHHHHHH
Q 013204 422 VDELISKYGKAL 433 (447)
Q Consensus 422 i~~~~~~l~~~l 433 (447)
+++++++|.+.-
T Consensus 546 ~~~L~~aL~~f~ 557 (714)
T PRK15400 546 ALSLLRALTDFK 557 (714)
T ss_pred HHHHHHHHHHHH
Confidence 999999988763
No 370
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.74 E-value=2.4e-06 Score=79.50 Aligned_cols=338 Identities=14% Similarity=0.170 Sum_probs=167.9
Q ss_pred EEEecCCccccccCCCCCHHHHHHHHHHHhcC---CcccccCcCCChHHHHHHHHHHHhcCcCC-----CC--eEEEeCC
Q 013204 34 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTL---PFYHSFWNRTTKPSLDLAKELLEMFTASK-----MA--KVFFTNS 103 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-----~~--~v~~~~s 103 (447)
..+|+.-|..-+--| -+.+..+++++-+.+ ..... ..+-+...++.+.+.+++-+.+ .+ ..+=+.|
T Consensus 27 ~KVNLgIGvY~de~G--k~pvl~aV~~Ae~~l~~~~~~k~--Yl~i~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~G 102 (396)
T COG1448 27 NKVNLGIGVYKDEDG--KTPVLRAVKKAEKRLLEQEKTKN--YLPIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLG 102 (396)
T ss_pred CeeeeeeeeeeCCCC--CcchhHHHHHHHHHhhccccccc--cCCcCCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCC
Confidence 456665554444444 233444444333221 11111 1233445555565555542211 12 3344679
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChh
Q 013204 104 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 183 (447)
Q Consensus 104 GseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (447)
||-|+..+.+.+... .++..|-+-+|++.-+.... ...|... ..+|.+ +.....
T Consensus 103 GTGAL~~~A~fl~~~------~~~~~vwis~PtW~NH~~If-~~aGl~v--------------~~Y~Yy---d~~~~~-- 156 (396)
T COG1448 103 GTGALRVAADFLARF------FPDATVWISDPTWPNHKAIF-EAAGLEV--------------ETYPYY---DAETKG-- 156 (396)
T ss_pred cchHHHHHHHHHHHh------CCCceEEeCCCCcHhHHHHH-HhcCCce--------------eeeecc---cccccc--
Confidence 999998888865433 34466888888884442211 1112111 011111 011111
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc--cccccc
Q 013204 184 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFGCDK 261 (447)
Q Consensus 184 ~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~--~~~~~~ 261 (447)
.+++.+-..+.......+-++.-+..|++| +-++.+-+++|.++.++.+.+-++|=+|.||+.-.. ..+...
T Consensus 157 ----~df~~mla~L~~a~~~~vvLLH~CcHNPTG--~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~ 230 (396)
T COG1448 157 ----LDFDGMLADLKTAPEGSVVLLHGCCHNPTG--IDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRL 230 (396)
T ss_pred ----ccHHHHHHHHHhCCCCCEEEEecCCCCCCC--CCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHH
Confidence 112444444444444445333333345554 667889999999999999999999999999953221 111111
Q ss_pred C-CCCCCe-e--eecccCCCcccceeEEE---eChhHHHHhhhccCCCCccCcCCCCCCcH-HHHHHHHHHHH--HHh--
Q 013204 262 Y-SIKPDL-V--SFAKALSSAYMPIGAIL---VSPEVSEVIHSQSNTLGSFSHGFTYSGHP-VSCAVAIEALK--IYK-- 329 (447)
Q Consensus 262 ~-~~~~d~-v--~~sK~l~gg~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~t~~~~~-~~~~aa~a~l~--~~~-- 329 (447)
+ ...+.+ + +|||.|+-=+-|+|++. -+++..+.+... ... ..-++|+.+| -++......|+ .+.
T Consensus 231 ~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sq---lk~-~iR~~ySnPP~~Ga~vva~IL~~p~Lra~ 306 (396)
T COG1448 231 FAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQ---LKA-IIRTNYSNPPAHGAAVVATILNNPELRAE 306 (396)
T ss_pred HHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHH---HHH-HHHhccCCCchhhHHHHHHHhCCHHHHHH
Confidence 1 112333 3 37897774115777543 355555554431 001 1112343222 23333323332 111
Q ss_pred ----hhcHHHHHHHHHHHHHHhHhhc-cC--CCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceE
Q 013204 330 ----ERNIVEQVNKIAPKFQDGVKAF-SD--SPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV 402 (447)
Q Consensus 330 ----~~~~~~~~~~~~~~l~~~L~~l-~~--~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~ 402 (447)
-.+.++++.+++..|.+.|++. .. ...+..- .| |+. +..-. .+++.+.-.+.||+.
T Consensus 307 W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q--~G-MFs--y~Gls------------~~QV~rLree~~IY~ 369 (396)
T COG1448 307 WEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQ--RG-MFS--YTGLS------------PEQVDRLREEFGIYL 369 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhc--Cc-eee--cCCCC------------HHHHHHHHHhccEEE
Confidence 1234566666777777777664 22 2222221 22 222 11110 223434444678888
Q ss_pred EeeCCEEEEecCCCCCHHHHHHHHHHHHHH
Q 013204 403 RVSGDNIMMSPPFIMSPEEVDELISKYGKA 432 (447)
Q Consensus 403 ~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~ 432 (447)
...| |++.. ..+++.|+.+.+++.++
T Consensus 370 v~sG---Ri~va-Gl~~~ni~~va~ai~~v 395 (396)
T COG1448 370 VASG---RINVA-GLNTSNIDYVAKAIAAV 395 (396)
T ss_pred ecCC---eeeec-cCChhhHHHHHHHHHhh
Confidence 7666 77754 78999999999998875
No 371
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.69 E-value=2.8e-06 Score=83.41 Aligned_cols=315 Identities=14% Similarity=0.155 Sum_probs=182.8
Q ss_pred hHHHHHHHHHHHhcCcCCCCeEEEe-CChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccC
Q 013204 77 KPSLDLAKELLEMFTASKMAKVFFT-NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 155 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~~v~~~-~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 155 (447)
....+|++.+|++. +.|.+.|- |||+.+-.+.++.+|.|...+|+.- ..|....-+.||..-......|..
T Consensus 582 ~lf~~Le~~Lc~iT---G~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~h-RnvClIPvSAHGTNPASA~Magmk---- 653 (1001)
T KOG2040|consen 582 QLFTELEKDLCEIT---GFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGH-RNVCLIPVSAHGTNPASAAMAGMK---- 653 (1001)
T ss_pred HHHHHHHHHhheee---cccceeecCCCCcccchhhHHHHHHHHHhccCCc-ceeEEEeecccCCChhhHHhcCCE----
Confidence 34457777787774 77777777 5999999999999999999988644 445555668999854443333322
Q ss_pred CCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHH
Q 013204 156 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 235 (447)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~ 235 (447)
+..+.+.. .+..++.+|+....++ .++.+++++.=.. +.|..-+ -+++++++.+
T Consensus 654 --------vvpV~~~~-------------~G~id~~dLk~kaekh-~~~Laa~MvTYPS-T~GvfE~---~i~d~cd~iH 707 (1001)
T KOG2040|consen 654 --------VVPVGCDA-------------NGNIDMVDLKAKAEKH-KDNLAALMVTYPS-THGVFEE---GIDDICDIIH 707 (1001)
T ss_pred --------EEEeeccC-------------CCCccHHHHHHHHHHh-hhhhheeEEeccc-ccccccc---cHHHHHHHHH
Confidence 12222221 1223357777666544 3567777775432 2344333 3899999999
Q ss_pred hcCCEEEEehh----hcCCCccccccc-cccCCCCCCeeeecccCCCcccceeEEEeChhHHHHhhhccCC----CCccC
Q 013204 236 KYDILFIADEV----ICAFGRLGTMFG-CDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT----LGSFS 306 (447)
Q Consensus 236 ~~g~~li~DEv----~~g~g~~g~~~~-~~~~~~~~d~v~~sK~l~gg~~~~g~~~~~~~~~~~~~~~~~~----~~~~~ 306 (447)
+||--++.|-+ |.|+-+.|..++ ..++++.- ||+=.-|||+.++|-+..++.+...+-.++-. ...-.
T Consensus 708 ehGGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLHK---TFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~ 784 (1001)
T KOG2040|consen 708 EHGGQVYLDGANMNAQVGLCRPGDIGADVCHLNLHK---TFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTS 784 (1001)
T ss_pred hcCCEEEecCCCccceecccCCccccccceeecccc---eeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCC
Confidence 99999999965 446655554332 22333222 45545667667777777777776655332100 00000
Q ss_pred cCCCC----CCcHHHHHHHHHHHHHHhhhcHHH---HHHHHHHHHHHhHhhccCCCceeeEeeeeeEEE----EEeecCC
Q 013204 307 HGFTY----SGHPVSCAVAIEALKIYKERNIVE---QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILG----TEFADNK 375 (447)
Q Consensus 307 ~~~t~----~~~~~~~~aa~a~l~~~~~~~~~~---~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~----i~~~~~~ 375 (447)
..++. +++..-+...++-++.+...++.+ ..--+..++.++|+.- ++++ .++.-..++ +++..-+
T Consensus 785 ~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil--~~~~~~~vaHEFIlD~r~fK 860 (1001)
T KOG2040|consen 785 PVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKIL--FRGENGLVAHEFILDLRPFK 860 (1001)
T ss_pred CccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--ccee--EecCCcceeeeeeeechhhc
Confidence 01111 222233334566677776555432 2223556666666542 2221 111111222 2332222
Q ss_pred CCCCCCCCCcchHHHHHHHHHHcCceEE----eeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013204 376 SPNEPFPPEWGIGAYFGAQCEKHGMLVR----VSGDNIMMSPPFIMSPEEVDELISKYGKALKATEE 438 (447)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 438 (447)
.+.. ..+..+.++|.+.|+..- |..+.+.+-|.-.-+.+|+|+++++|-..-+++++
T Consensus 861 ~~ag------ieavDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI~~ 921 (1001)
T KOG2040|consen 861 KTAG------IEAVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREEIAQ 921 (1001)
T ss_pred cccC------CcHHHHHHHHHhccCCCCccccccCCceEeccCccccHHHHHHHHHHHHHHHHHHHH
Confidence 1110 125568999999998754 33478999999999999999999998777666553
No 372
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.60 E-value=6e-06 Score=77.99 Aligned_cols=244 Identities=16% Similarity=0.132 Sum_probs=137.0
Q ss_pred EEEecCCccccccCCC--CCHHHHHHHHHHHhcCCcc--cccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHH
Q 013204 34 KYLDSLAGLWCTALGG--SEPRLVAAATAQLNTLPFY--HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 109 (447)
Q Consensus 34 ~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~ 109 (447)
.+++.++..-..+||- -+|++++++.+.+...... +...+....-...+++.++.. .+.+.++.++.-+.|+.
T Consensus 21 ~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~---~~aea~~ivnnn~aAVl 97 (395)
T COG1921 21 RVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGL---TGAEAAAIVNNNAAAVL 97 (395)
T ss_pred hhhhhhhhheeccCCCccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcc---cchhheeeECCcHHHHH
Confidence 4455555334456664 4789999998888653221 101111112222444444444 35667888998888888
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEcC---CCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHH
Q 013204 110 TQVKLVWYYNNALGRPNKKKFIARQK---SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS 186 (447)
Q Consensus 110 ~Al~~~~~~~~~~~~~~~~~vi~~~~---~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (447)
.++.... .++..|+..-+ ++|......+...|..... +... +.
T Consensus 98 l~~~al~--------~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~E------------vG~t--------n~------ 143 (395)
T COG1921 98 LTLNALA--------EGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVE------------VGTT--------NR------ 143 (395)
T ss_pred HHHhhhc--------cCCeEEEEccccccCCCCChhHHHHHcCCEEEE------------eccc--------Cc------
Confidence 8777552 23344444321 3554544444444422110 0000 00
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCC
Q 013204 187 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP 266 (447)
Q Consensus 187 ~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~ 266 (447)
....+.+..+.... ....-+..+.++..+.+. ++++.++|++||+++|+|..-....+ -.+........-+
T Consensus 144 -t~~~d~~~AIne~t--a~llkV~s~~~~f~~~l~-----~~~l~~ia~~~~lpvivD~aSg~~v~-~e~~l~~~la~Ga 214 (395)
T COG1921 144 -THLKDYELAINENT--ALLLKVHSSNYGFTGMLS-----EEELVEIAHEKGLPVIVDLASGALVD-KEPDLREALALGA 214 (395)
T ss_pred -CCHHHHHHHhccCC--eeEEEEeecccccccccc-----HHHHHHHHHHcCCCEEEecCCccccc-cccchhHHHhcCC
Confidence 01366777775311 122333444445555443 78899999999999999965321111 1111122334458
Q ss_pred Ceeeec--ccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhc
Q 013204 267 DLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN 332 (447)
Q Consensus 267 d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~ 332 (447)
|+|+|| |.|+| ...|.+++++++++.+...+ ....+-.....+++..++|+....++
T Consensus 215 DLV~~SgdKllgG--PqaGii~GkKelI~~lq~~~-------l~Ralrv~K~tla~l~~aLe~y~~~~ 273 (395)
T COG1921 215 DLVSFSGDKLLGG--PQAGIIVGKKELIEKLQSHP-------LKRALRVDKETLAALEAALELYLQPE 273 (395)
T ss_pred CEEEEecchhcCC--CccceEechHHHHHHHHhhh-------hhhhhhcCcHhHHHHHHHHHHHcCch
Confidence 999998 77877 57899999999998887431 11233445677777778888766543
No 373
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.60 E-value=0.00031 Score=71.79 Aligned_cols=248 Identities=19% Similarity=0.170 Sum_probs=134.0
Q ss_pred CChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHH-----hcCCC------------------------
Q 013204 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN-----ALGRP------------------------ 125 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~-----~~~~~------------------------ 125 (447)
.+....++.+++++++.. +...-.|++|||+||..||-++|.... ....+
T Consensus 121 ~t~lE~~vi~~la~l~G~-~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~ 199 (608)
T TIGR03811 121 TSQMEEEVGKEFATLMGY-KNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLE 199 (608)
T ss_pred HHHHHHHHHHHHHHHhCC-CCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccccccccccc
Confidence 445566777888888743 234677999999999999999986431 00000
Q ss_pred --------------------CcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHH
Q 013204 126 --------------------NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 185 (447)
Q Consensus 126 --------------------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (447)
.+..+++....-|-+..-+...-|. ....+..+|+...++
T Consensus 200 ~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGl---------G~~~vv~VpvD~~~r----------- 259 (608)
T TIGR03811 200 SAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGI---------GLDQVIPVPVDSNYR----------- 259 (608)
T ss_pred ccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCC---------CcccEEEeecCCCCc-----------
Confidence 0011233333445554444333322 112233444433222
Q ss_pred HHHHHHHHHHHHHhh--CCCcEEEEEEccccCCCCCccCChhHHHHHHHHH---HhcCC--EEEEehhhcCCCcc---cc
Q 013204 186 STRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV---KKYDI--LFIADEVICAFGRL---GT 255 (447)
Q Consensus 186 ~~~~~~~le~~l~~~--~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~---~~~g~--~li~DEv~~g~g~~---g~ 255 (447)
.+++.|++.+... ....+.+|+...-..+.|.+-| +++|.++| +++|+ ++++|.++.|+.+. ..
T Consensus 260 --md~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp----l~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~ 333 (608)
T TIGR03811 260 --MDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG----IDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDE 333 (608)
T ss_pred --CCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC----HHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccc
Confidence 1246777776543 1223445555555555677766 89998888 77898 69999999886311 00
Q ss_pred -----c-------------c-----------ccccCCC-CCCeeeec--ccCCCcccceeEEEeCh-hHHHHhhhccCCC
Q 013204 256 -----M-------------F-----------GCDKYSI-KPDLVSFA--KALSSAYMPIGAILVSP-EVSEVIHSQSNTL 302 (447)
Q Consensus 256 -----~-------------~-----------~~~~~~~-~~d~v~~s--K~l~gg~~~~g~~~~~~-~~~~~~~~~~~~~ 302 (447)
+ | .....++ ..|-+++. |.+.-+ ++.|+++.+. .+.+.+.......
T Consensus 334 ~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~P-y~~G~ll~Rd~~~~~~~~~~a~Yl 412 (608)
T TIGR03811 334 DDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIP-YSAGGIVIQDIRMRDVISYFATYV 412 (608)
T ss_pred cccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccC-CCeEEEEEeCHHHHHHHhcCcchh
Confidence 0 0 0011233 36777765 776666 5888888765 4444443221111
Q ss_pred Cc-------cCcCCCCCCcH--HHHHHHHHHHHHH--hhhc---HHHHHHHHHHHHHHhHhh
Q 013204 303 GS-------FSHGFTYSGHP--VSCAVAIEALKIY--KERN---IVEQVNKIAPKFQDGVKA 350 (447)
Q Consensus 303 ~~-------~~~~~t~~~~~--~~~~aa~a~l~~~--~~~~---~~~~~~~~~~~l~~~L~~ 350 (447)
.. .....+..+.. ..+++.+.+++.+ ..++ +.++.-+..+++.+.|++
T Consensus 413 ~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~ 474 (608)
T TIGR03811 413 FEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNN 474 (608)
T ss_pred ccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00 00001222222 3355566777766 3333 455666677777777766
No 374
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.46 E-value=5.7e-05 Score=71.96 Aligned_cols=354 Identities=17% Similarity=0.191 Sum_probs=177.2
Q ss_pred CCCCEEEecCCccccccCCCCCHHHHHHHHHHHhcCCccc-ccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHH
Q 013204 30 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH-SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN 108 (447)
Q Consensus 30 ~dg~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~ 108 (447)
.||+.-+...|+. ...+ +|+..+-+.+....+-..+ ..+........+....+++++......--.-+.||||+.
T Consensus 76 ld~~~~~~~vS~~--v~~~--~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~ 151 (491)
T KOG1383|consen 76 LDGNPRLGLASGV--VYWG--EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESG 151 (491)
T ss_pred cCCCcccCeeeEE--EecC--CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHH
Confidence 4566444444443 3333 7777777777776531112 223334555566677777777432212223457899998
Q ss_pred HHHHHHHHHHHHh-cCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCC-CcccCCCCCCChhHHH
Q 013204 109 DTQVKLVWYYNNA-LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYS 186 (447)
Q Consensus 109 ~~Al~~~~~~~~~-~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 186 (447)
..+.+..+..... ++-. +..++.. -+-|....-+.. -| ......+++. ..++
T Consensus 152 l~~~k~~~~~r~~~k~I~-~p~iv~~-~~v~~a~eK~a~---------yf---~v~l~~V~~~~~~~~------------ 205 (491)
T KOG1383|consen 152 LAAKKSYRNRRKAQKGID-KPNIVTP-QNVHAAFEKAAR---------YF---EVELREVPLDEGDYR------------ 205 (491)
T ss_pred HHHHHHHHHHHHhccCCC-Cccccch-HHHHHHHHHHHh---------hE---EEEEEeeeccccceE------------
Confidence 8888766544332 2221 2333322 122222111100 01 1112233332 1222
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHh-cCCEEEEehhhcCCCcc-ccccccccCCC
Q 013204 187 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK-YDILFIADEVICAFGRL-GTMFGCDKYSI 264 (447)
Q Consensus 187 ~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~-~g~~li~DEv~~g~g~~-g~~~~~~~~~~ 264 (447)
-|+.++..... .++.+++.+..+-..|.+-+ +++|.++.-+ |++++++|..-.||--. +.. ....++.
T Consensus 206 ----~D~~k~~~~i~-eNti~lv~~~~~~p~G~~e~----ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~-~~~~fdF 275 (491)
T KOG1383|consen 206 ----VDPGKVVRMID-ENTIMLVGSLPNFPTGEIED----VEKLADLLLEIWDIPIHVDACLGGFINPAGYL-NEEEFDF 275 (491)
T ss_pred ----ecHHHHHHHhc-cceEEEEEEcCCCCccchhh----HHHHHHHHHHHhCCceeecccCcccccccccc-Ccccccc
Confidence 23444443333 45667777766666665544 8999999888 99999999988877332 211 1122333
Q ss_pred C----CCeeeec-c-cCCCcccceeEEEeC-hhH-HHHhhhccCCCCccCcCCCCCCcHH--HHHHHHHHHHHHhhhcH-
Q 013204 265 K----PDLVSFA-K-ALSSAYMPIGAILVS-PEV-SEVIHSQSNTLGSFSHGFTYSGHPV--SCAVAIEALKIYKERNI- 333 (447)
Q Consensus 265 ~----~d~v~~s-K-~l~gg~~~~g~~~~~-~~~-~~~~~~~~~~~~~~~~~~t~~~~~~--~~~aa~a~l~~~~~~~~- 333 (447)
. +.+-+-+ | ++.- .++++++-+ +++ .+.+....+..+....+.|..++-. -.++.++++=.+..++.
T Consensus 276 r~p~V~Sisa~~HKYGl~~--~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~ 353 (491)
T KOG1383|consen 276 RVPGVTSISADGHKYGLAP--AGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYR 353 (491)
T ss_pred CCCCceeEeeccceeeeee--cCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHH
Confidence 2 2233333 2 3332 445666643 443 3444333333444333334333221 12233444433334443
Q ss_pred --HHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEe--eCCEE
Q 013204 334 --VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV--SGDNI 409 (447)
Q Consensus 334 --~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~--~g~~i 409 (447)
.+++.+..+.+++.++++.+..+++. ..+.+...+....+ --.+.+.|.+.|.++-. ....+
T Consensus 354 ~~~~~ive~~~~l~egie~i~~i~i~gk-----p~vs~~~~~s~~~~---------i~elsd~l~~~GW~lnalq~P~a~ 419 (491)
T KOG1383|consen 354 ENTQNIVETARKLREGIENIKGIKIVGK-----PLVSFILFGSNDVN---------IFELSDLLRKKGWILNALQFPAAI 419 (491)
T ss_pred HHHHHHHHHHHHHHHhhhccccceecCC-----CcEEEEEccCCccc---------hhhhhHHHHhcCcCccccCCCCce
Confidence 45666777888888888643333221 11223332222111 12377888899987642 12344
Q ss_pred EEecCCCCCHHH-HHHHHHHHHHHHHHHHHH
Q 013204 410 MMSPPFIMSPEE-VDELISKYGKALKATEER 439 (447)
Q Consensus 410 R~~~~~~~t~e~-i~~~~~~l~~~l~~~~~~ 439 (447)
-++....+..++ .++++.-+++++++++..
T Consensus 420 Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~ 450 (491)
T KOG1383|consen 420 HICVTRVHAREDVADRFVADIRKVVEELKSL 450 (491)
T ss_pred EEEEEeeeccHHHHHHHHHHHHHHHHHHHhC
Confidence 444445555555 578888888888887653
No 375
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.33 E-value=0.00022 Score=75.65 Aligned_cols=286 Identities=12% Similarity=0.157 Sum_probs=150.2
Q ss_pred hHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCC
Q 013204 77 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK 156 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 156 (447)
+...++...++++. +-+...+.+..+++.+-|+++...+.. ++ ++++|++ +.+-|..+...+.... ..
T Consensus 109 e~l~e~Qt~i~eLt-Gm~~aNaSl~d~atA~aEa~~~a~~~~---~~--~~~~vlv-~~~~hP~~~~v~~t~a-----~~ 176 (939)
T TIGR00461 109 EALLNFQTVVSDLT-GLPVANASLLDEGTAAAEAMALSFNVS---KK--KANKFFV-AKDLHPQTKSVLHTRA-----KP 176 (939)
T ss_pred HHHHHHHHHHHHHH-CCChhhhhccchhhHHHHHHHHHHHhh---cC--CCCEEEE-CCCCCcchHHHHHHHH-----Hh
Confidence 33446667777775 123335577888888877555443211 11 2356655 4555555433322110 11
Q ss_pred CCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHh
Q 013204 157 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK 236 (447)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~ 236 (447)
.++. +..++ .++|++.+ +++++++...+.. |.+-. +++|.+++++
T Consensus 177 ~g~~---v~~~~---------------------~~~l~~~~------~~~~v~~q~Pn~~-G~ied----~~~i~~~~h~ 221 (939)
T TIGR00461 177 FGIE---VIVVD---------------------CSDIKKAV------DVFGCLLQYPATD-GSILD----YKQLIDALHS 221 (939)
T ss_pred cCcE---EEEEc---------------------HHHHhhcC------CEEEEEEECCCCC-eEEec----HHHHHHHHHH
Confidence 1110 11111 13343322 3667777555444 44532 8999999999
Q ss_pred cCCEEEEehhhcCCCccccccccccCCCCCCeeee-cc----cCCCcccceeEEEeChhHHHHhhhc-----cCCCC--c
Q 013204 237 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF-AK----ALSSAYMPIGAILVSPEVSEVIHSQ-----SNTLG--S 304 (447)
Q Consensus 237 ~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~-sK----~l~gg~~~~g~~~~~~~~~~~~~~~-----~~~~~--~ 304 (447)
+|+++|++--...++..-.++ .+-.|+++- +| .+++|+.-.|++.+++++...+-.. ....+ .
T Consensus 222 ~gal~~~~ad~~al~ll~~Pg-----e~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~ 296 (939)
T TIGR00461 222 HKSLVSVAADLMALTLLTPPG-----HYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTA 296 (939)
T ss_pred cCCEEEEEechHHhCCcCCHH-----HcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCcc
Confidence 999999865443222111111 123687742 34 4455556688888888877665321 00000 0
Q ss_pred cC--------c------CCCCCCcHHHHHHHHHH--HHHHhhhcH---HHHHHHHHHHHHHhHhhccCCCceeeEeeeee
Q 013204 305 FS--------H------GFTYSGHPVSCAVAIEA--LKIYKERNI---VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL 365 (447)
Q Consensus 305 ~~--------~------~~t~~~~~~~~~aa~a~--l~~~~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~ 365 (447)
+. | .+..+.+...++ ..++ +..+..+++ .+++..+..++.+.|++. ++.++.. ..--
T Consensus 297 ~~l~LqtReqhIrRekAtSNICt~qaL~a-~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~-G~~~~~~--~fF~ 372 (939)
T TIGR00461 297 LRLALQTREQHIRRDKATSNICTAQVLLA-NVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND-PHELINK--TWFD 372 (939)
T ss_pred ceeecccccccccccccCcchhHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC--Cccc
Confidence 00 0 001111111111 1112 333334433 456666777888888774 3332211 1000
Q ss_pred EEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEEEecCCCCCHHHHHHHHHHHH
Q 013204 366 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYG 430 (447)
Q Consensus 366 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR~~~~~~~t~e~i~~~~~~l~ 430 (447)
-+.+.+... ....+.++++++||.++... +.++++..-.+|++||+.+++.|.
T Consensus 373 ~~~v~~~~~------------~~~~i~~~~~~~gi~l~~~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 373 TLTVKVGNG------------ISSELLKAAEEFNINLRAVDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred eEEEEeCCC------------CHHHHHHHHHHCCCeeeecCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 112333111 14568899999999988653 579999999999999999999995
No 376
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.31 E-value=0.00022 Score=64.34 Aligned_cols=343 Identities=17% Similarity=0.193 Sum_probs=180.9
Q ss_pred ccCCCCCHHHHHHHHHHHhc---CC-ccc----ccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHH
Q 013204 45 TALGGSEPRLVAAATAQLNT---LP-FYH----SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW 116 (447)
Q Consensus 45 ~~lG~~~p~v~~a~~~~~~~---~~-~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~ 116 (447)
++||..+......+.+.++. +. .+| ..|....+++..+...+. +...++|-+++|=+ +|...+.+.+
T Consensus 74 NSLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV----GA~e~EvavmNsLT-vNlh~Ll~sF 148 (465)
T KOG3846|consen 74 NSLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV----GAQENEVAVMNSLT-VNLHSLLISF 148 (465)
T ss_pred cccccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc----cCCchhhhhHhhhh-hHHHHHHHHh
Confidence 67898888777777776654 21 111 123333445555444333 23455666666443 4444444433
Q ss_pred HHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHH
Q 013204 117 YYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDL 196 (447)
Q Consensus 117 ~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~ 196 (447)
+. -...|-+|+.-..+|....++.-+... ..+..+....+ . -.|.+-++... .+|+-+.
T Consensus 149 yK----PTekR~KILlE~kaFPSDhYAiesQ~~----lhG~~~e~sm~-~---------iePREGEetlR---teDILd~ 207 (465)
T KOG3846|consen 149 YK----PTEKRFKILLEKKAFPSDHYAIESQCK----LHGISPENSMI-Q---------IEPREGEETLR---TEDILDT 207 (465)
T ss_pred cC----CcchhhhhhhccCCCCchHHHHHhhhh----hcCCChHHheE-E---------ecccccccchh---HHHHHHH
Confidence 21 113356777767777655433222110 00111100000 0 01122222222 1344444
Q ss_pred HHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--cc
Q 013204 197 ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KA 274 (447)
Q Consensus 197 l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~ 274 (447)
+... .+.+|+|++..++--+|.... +.+|-..-+..|+++-+|=+|. +|-. + .+......|+.|.. |-
T Consensus 208 IEkn-gDeiA~v~fSGvqyYTGQ~Fd----i~aIT~Agq~kgc~VGfDLAHA-vgNV--p--L~LHdWgVDFACWCSYKY 277 (465)
T KOG3846|consen 208 IEKN-GDEIALVCFSGVQYYTGQYFD----IGAITFAGQFKGCLVGFDLAHA-VGNV--P--LQLHDWGVDFACWCSYKY 277 (465)
T ss_pred HHhc-CCeEEEEEeecceeecccccc----hhhhhhcccCCCcEechhhhhh-hcCC--c--eEEeecCCceEEEeeecc
Confidence 4433 478999999999988887765 6666665666799999998886 5432 2 22223346888753 53
Q ss_pred CCCcccceeEEEeChhHHH----Hhhhc--cCCCCcc-----------CcCCCCC-CcHHHHHHHHHHHHHHhhhcHHHH
Q 013204 275 LSSAYMPIGAILVSPEVSE----VIHSQ--SNTLGSF-----------SHGFTYS-GHPVSCAVAIEALKIYKERNIVEQ 336 (447)
Q Consensus 275 l~gg~~~~g~~~~~~~~~~----~~~~~--~~~~~~~-----------~~~~t~~-~~~~~~~aa~a~l~~~~~~~~~~~ 336 (447)
+..|.-++|.+...++..+ ++... ......| .-+.-.+ ++.+..++..++|++...-. .+.
T Consensus 278 lnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~-~~~ 356 (465)
T KOG3846|consen 278 LNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFN-INE 356 (465)
T ss_pred cccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhh-HHH
Confidence 3322224565555443222 22110 0000000 0111112 22334455557777765433 333
Q ss_pred HHH----HHHHHHHhHhhc--cCCCc-----------eeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcC
Q 013204 337 VNK----IAPKFQDGVKAF--SDSPI-----------IGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG 399 (447)
Q Consensus 337 ~~~----~~~~l~~~L~~l--~~~~~-----------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 399 (447)
+++ ++.++...++.. .+++. +..+..+|..+.+.|..+. ..+.++|.++|
T Consensus 357 lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp~-------------~~vfqeL~krG 423 (465)
T KOG3846|consen 357 LRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSPT-------------PKVFQELHKRG 423 (465)
T ss_pred HhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCCc-------------hHHHHHHHHcC
Confidence 444 444444444443 12221 1233445777777776543 24778999999
Q ss_pred ceEEee-CCEEEEec-CCCCCHHHHHHHHHHHHHHHHHHH
Q 013204 400 MLVRVS-GDNIMMSP-PFIMSPEEVDELISKYGKALKATE 437 (447)
Q Consensus 400 i~~~~~-g~~iR~~~-~~~~t~e~i~~~~~~l~~~l~~~~ 437 (447)
+++--. .++||+.| |++++-.|+-.+++.|.+++..++
T Consensus 424 v~~DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 424 VIGDKRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred eeccccCCCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 987644 37899998 588999999999999999988764
No 377
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.30 E-value=2.1e-06 Score=80.30 Aligned_cols=124 Identities=19% Similarity=0.200 Sum_probs=53.3
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCC-CCCc-cCChhHHHHHHHHHHhcCCEEEEehhhc------CCCccccccccccC
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGA-GGVI-PPPATYFEKVQAVVKKYDILFIADEVIC------AFGRLGTMFGCDKY 262 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~-~G~~-~~~~~~l~~l~~l~~~~g~~li~DEv~~------g~g~~g~~~~~~~~ 262 (447)
.|.++.+. +++.+.+-+-+.|-. .|.. .++ ++++.+++++|++++|.|-.-. .+|..+.+-..+..
T Consensus 127 ~Dye~AI~---e~Ta~ll~Vh~Sn~~i~GFt~~~~---~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~ 200 (367)
T PF03841_consen 127 SDYEKAIT---ENTAALLKVHTSNFRIQGFTGEVS---LEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYL 200 (367)
T ss_dssp ----------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CC
T ss_pred cccccccc---cccccccccccccccccccccccc---HHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHh
Confidence 55666664 334444456555432 1211 222 8999999999999999995431 12222233333444
Q ss_pred CCCCCeeeec--ccCCCcccceeEEEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHh
Q 013204 263 SIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK 329 (447)
Q Consensus 263 ~~~~d~v~~s--K~l~gg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~ 329 (447)
..-+|+|+|| |.++| ...|.+++++++++.++..+ ..-.+-..-+.+++..++|+...
T Consensus 201 ~~GaDlV~fSGdKlLGG--PQaGiI~Gkk~lI~~lk~~p-------l~RalrvdK~tla~L~atL~~Y~ 260 (367)
T PF03841_consen 201 AAGADLVTFSGDKLLGG--PQAGIIVGKKELIEKLKKHP-------LGRALRVDKLTLAALEATLRLYL 260 (367)
T ss_dssp CCT-SEEEEETTSSSSS---S-EEEEEEHHHHHHHHHHH-------HTTT-B--HHHHHHHHHHHHH--
T ss_pred hcCCCEEEEECCCcCCC--CCeEEEEeCHHHHHHHhhCC-------CcceEeeCHHHHHHHHHHHHHHH
Confidence 4458999998 77877 46899999999999987531 11234456777887778887543
No 378
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.27 E-value=9.8e-05 Score=71.59 Aligned_cols=286 Identities=13% Similarity=0.133 Sum_probs=127.9
Q ss_pred hHHHHHHHHHHHhcCcCCCCeE--EEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcccc
Q 013204 77 KPSLDLAKELLEMFTASKMAKV--FFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 154 (447)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~~v--~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 154 (447)
..+-++...++++. +++-+ -...+++.+-|+++.+.+.. . .++++|++ ..+-|+.+...+.....+
T Consensus 110 q~lfe~Qs~i~eLT---GmdvaNaSlyd~atA~aEa~~ma~r~~----~-~~~~~vlv-~~~~hP~~~~v~~t~a~~--- 177 (429)
T PF02347_consen 110 QALFEYQSMICELT---GMDVANASLYDGATAAAEAMLMAVRAT----K-RKRNKVLV-PESLHPQTRAVLRTYAAP--- 177 (429)
T ss_dssp HHHHHHHHHHHHHH---TSSEE-SEBSSCCHHHHHHHHHHHHHH----T-T---EEEE-ETTS-CHHHHHHHHHCCH---
T ss_pred HHHHHHHHHHHHhh---CCCccCCCCCChhHHHHHHHHHHHHhc----c-cCCcEEEE-cCCcChhhHHHHHHhhhh---
Confidence 44457788888886 55543 55566666666554444433 1 11345555 556777665443322111
Q ss_pred CCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHH
Q 013204 155 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 234 (447)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~ 234 (447)
.+ ..+..+++.+... .+ .+++++|++...+.-| .+ -+ +++|.+++
T Consensus 178 --~g---~~iv~~~~~~~~~----------------~d---------~~~~a~v~vq~Pn~~G-~~-ed---~~~i~~~~ 222 (429)
T PF02347_consen 178 --LG---IEIVEVPLDEDGT----------------TD---------DDDTAAVMVQNPNTFG-VF-ED---IKEIADIA 222 (429)
T ss_dssp --CC---EEEEEE-BBTTCS----------------B----------STTEEEEEEESS-TTS-B---T---HHHHHHHH
T ss_pred --CC---eEEEEecccccCC----------------cc---------ccCeEEEEeecCCCCc-eE-ee---HHHHHHHH
Confidence 11 1112222211100 01 3679999998887665 33 22 99999999
Q ss_pred HhcCCEEEEehhhc-CCCccccccccccCCCCCCeee-ecc----cCCCcccceeEEEeChhHHHHhhhc-----cCCCC
Q 013204 235 KKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVS-FAK----ALSSAYMPIGAILVSPEVSEVIHSQ-----SNTLG 303 (447)
Q Consensus 235 ~~~g~~li~DEv~~-g~g~~g~~~~~~~~~~~~d~v~-~sK----~l~gg~~~~g~~~~~~~~~~~~~~~-----~~~~~ 303 (447)
+++|+++|+ -+-- .++-.-.++ . +-.|+++ -+| .+++|+..+|++.++++++..+-.. ....+
T Consensus 223 h~~gal~~~-~ad~~aL~~l~~Pg---e--~GADI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G 296 (429)
T PF02347_consen 223 HAAGALVIV-GADPNALGGLKSPG---E--YGADIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADG 296 (429)
T ss_dssp HHTT-EEEE-CGGCCGCCTC--GG---G--GT-SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCC
T ss_pred HHcCCEEEE-ecCHHHHhCcCChh---h--cCccEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccc
Confidence 999999986 2211 111111111 1 2358874 234 4455667889999999977655221 00000
Q ss_pred --cc--------------CcCCCCCCcHHHHH-HHHHHHHHHhhhc---HHHHHHHHHHHHHHhHhhccCCCceeeEeee
Q 013204 304 --SF--------------SHGFTYSGHPVSCA-VAIEALKIYKERN---IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT 363 (447)
Q Consensus 304 --~~--------------~~~~t~~~~~~~~~-aa~a~l~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~ 363 (447)
.+ -..+..+.|..-++ ++..-+..+..++ +.+....+..++++.|+++...++. ..
T Consensus 297 ~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~----~~ 372 (429)
T PF02347_consen 297 KRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFD----NP 372 (429)
T ss_dssp SCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSS----SS
T ss_pred cceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccC----CC
Confidence 00 01123333333322 2223334444444 4467777888888888875111111 11
Q ss_pred eeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEee-CCEEEEecCCCCCHHHHHHHHHHH
Q 013204 364 GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMMSPPFIMSPEEVDELISKY 429 (447)
Q Consensus 364 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-g~~iR~~~~~~~t~e~i~~~~~~l 429 (447)
.+.-..+..... . ....+.++....|+..... .+.+-+++.=.+|++|||++++.|
T Consensus 373 -~f~e~v~~~~~~-~--------~~~~l~~~~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 373 -FFFEFVVVFSKD-K--------EVEELLKRGIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp -SBSSEEEEESS--H--------HHHHHHHTT----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred -CceeeeeecCCc-H--------HHHHHHHHHHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 111111111110 0 1222444444555332211 357899999999999999999875
No 379
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.25 E-value=6.2e-05 Score=70.80 Aligned_cols=323 Identities=15% Similarity=0.182 Sum_probs=158.7
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHH----hcCCCCcceEEEE-cCCCccchhhhhcccCCccccC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN----ALGRPNKKKFIAR-QKSYHGSTLIAASLSGLPALHQ 155 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~----~~~~~~~~~vi~~-~~~yhg~~~~~~~~~~~~~~~~ 155 (447)
++..++.+...+..-.+-+|++||+-+|.-|+.++|..+. ..|...-...|.| +.--|=+..-+...-|.
T Consensus 145 ~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~----- 219 (510)
T KOG0629|consen 145 EVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGL----- 219 (510)
T ss_pred HHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhcc-----
Confidence 4455666665543324678999999999999999985431 2222222344444 33444443222221111
Q ss_pred CCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCC--cEEEEEEccccCCCCCccCChhHHHHHHHH
Q 013204 156 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPE--TIAAFIAEPVIGAGGVIPPPATYFEKVQAV 233 (447)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~--~~a~vi~epv~~~~G~~~~~~~~l~~l~~l 233 (447)
+.. ....+++. ..+....+|||+.+..++.+ .+..|-+..-...-|..-| |+.|+++
T Consensus 220 --gtd--~c~~v~t~-------------e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd----L~~iadi 278 (510)
T KOG0629|consen 220 --GTD--HCIKVKTD-------------ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD----LNGIADI 278 (510)
T ss_pred --CCc--eeEEeccc-------------ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc----HHHHHHH
Confidence 100 01112221 12223358999988664332 2333333332222365555 9999999
Q ss_pred HHhcCCEEEEehhhcCCCccccccccccCCCC-CCeeeec--ccCCCcccceeEEEeChh-HHHHhhhccC----CCCcc
Q 013204 234 VKKYDILFIADEVICAFGRLGTMFGCDKYSIK-PDLVSFA--KALSSAYMPIGAILVSPE-VSEVIHSQSN----TLGSF 305 (447)
Q Consensus 234 ~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~-~d~v~~s--K~l~gg~~~~g~~~~~~~-~~~~~~~~~~----~~~~~ 305 (447)
|++|+.++++|.+..|---.....-+...|+. .|-++.+ |-++.+ ++.++.+.+.+ +++....... +...+
T Consensus 279 C~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gap-lqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~ 357 (510)
T KOG0629|consen 279 CEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAP-LQCSAFLTREEGLLQRCNQMSAIYLFQQDKF 357 (510)
T ss_pred HHhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCc-chhhHHHHHHHHHHHhhcccchhhhhccCce
Confidence 99999999999887542122111112334553 6777775 777776 78888887765 3443322110 00000
Q ss_pred CcCCCCC-CcH-HHHHHHHHHHHH---Hhh---h---cHHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecC
Q 013204 306 SHGFTYS-GHP-VSCAVAIEALKI---YKE---R---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADN 374 (447)
Q Consensus 306 ~~~~t~~-~~~-~~~~aa~a~l~~---~~~---~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~ 374 (447)
.. .++. ++- +-|..-.-..+. .++ . .-.++.-++.+++.+.|++...+..+....++-..+.+.+..+
T Consensus 358 Yd-vS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~ 436 (510)
T KOG0629|consen 358 YD-VSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPP 436 (510)
T ss_pred ee-cccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCch
Confidence 00 0111 111 111111111211 111 2 2345666788888888887643333222222211112211111
Q ss_pred CCC-CCCCC----CCcchHHHHHHHHHHcCceEE---eeC---CEEE--EecCCCCCHHHHHHHHHHHHHH
Q 013204 375 KSP-NEPFP----PEWGIGAYFGAQCEKHGMLVR---VSG---DNIM--MSPPFIMSPEEVDELISKYGKA 432 (447)
Q Consensus 375 ~~~-~~~~~----~~~~~~~~~~~~l~~~Gi~~~---~~g---~~iR--~~~~~~~t~e~i~~~~~~l~~~ 432 (447)
.-. ...-+ .-.+.+-.+..+|.++|.... |.+ +.+| +++| +.+.+++|.+++.|++.
T Consensus 437 ~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~-a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 437 SLRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNP-ALTEADLDFLLDEIERL 506 (510)
T ss_pred HhccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccc-hhhhhhHHHHHHHHHHh
Confidence 100 00000 111223446677888885533 333 3334 4444 67899999999988764
No 380
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.19 E-value=0.0052 Score=58.51 Aligned_cols=290 Identities=13% Similarity=0.164 Sum_probs=149.3
Q ss_pred HHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCccccCCCCCC
Q 013204 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 160 (447)
Q Consensus 81 ~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (447)
++...++++. +-+.........+|.+-|+++.+.+.. + .+++++++ +..-|..+...+... .+++++.
T Consensus 124 efQtlv~dLT-Gm~VANASm~DeaTAaAEAm~ma~r~~----k-~k~~~~~V-~~~vhpqt~~Vl~Tr-----a~~~g~~ 191 (450)
T COG0403 124 EFQTLVADLT-GLDVANASMLDEATAAAEAMLMAKRVT----K-KKRNKFLV-PKDVHPQTLDVLRTR-----AEGLGIE 191 (450)
T ss_pred HHHHHHHHHh-CCCcccchhhhhHHHHHHHHHHHHHhh----c-CcCceEEe-cCCCCHHHHHHHHhh-----cccCceE
Confidence 3444555554 223334555666776666665544422 1 22455554 667777766555422 2222211
Q ss_pred CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCE
Q 013204 161 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 240 (447)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~ 240 (447)
+...++. ++++|++. ..+.+.+++++-.+..|.... -+..|.+.++++|++
T Consensus 192 ---i~~~~~~------------------d~~~l~~~----~~~~~~gv~vQyP~~~G~~~~----d~~~l~~~~h~~~al 242 (450)
T COG0403 192 ---IEVVDAD------------------DLDDLESA----DDGDVFGVLVQYPNTFGIVEE----DLRALIEAAHSAGAL 242 (450)
T ss_pred ---EEEeccc------------------hhhhhhhc----cccCeEEEEEecCCCCCccch----hHHHHHHHHhhcCCE
Confidence 1111110 13555554 235789999998876663332 299999999999998
Q ss_pred EEE--ehhhcCCCccccccccccCCCCCCeee-----ecccCCCcccceeEEEeChhHHHHhhhc----c-CCC--Ccc-
Q 013204 241 FIA--DEVICAFGRLGTMFGCDKYSIKPDLVS-----FAKALSSAYMPIGAILVSPEVSEVIHSQ----S-NTL--GSF- 305 (447)
Q Consensus 241 li~--DEv~~g~g~~g~~~~~~~~~~~~d~v~-----~sK~l~gg~~~~g~~~~~~~~~~~~~~~----~-~~~--~~~- 305 (447)
+++ |=+--++ .-.++. .-.||++ ||=.|+=|+.-+|++.++++++..+-.+ + ... +.+
T Consensus 243 ~~v~aDplaL~L--L~pPGe-----~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~r 315 (450)
T COG0403 243 VIVAADPLALGL--LKPPGE-----FGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFR 315 (450)
T ss_pred EEEEechhHhhc--cCCccc-----cCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhh
Confidence 885 4332222 111111 2357775 3333332335688888888886654210 0 000 000
Q ss_pred -------------CcCCCCCCcHH--HHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHhHhhcc-CCCceeeEeeeeeE
Q 013204 306 -------------SHGFTYSGHPV--SCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLI 366 (447)
Q Consensus 306 -------------~~~~t~~~~~~--~~~aa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~l~-~~~~~~~~~~~g~~ 366 (447)
-..+..+.+.. +.+++.. .-++..+ ++.+++.++..++.+.|++.. ....+ ....|
T Consensus 316 LaLQTREQHIRReKATSNICTnQaLlA~~As~y-~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~----~~~fF 390 (450)
T COG0403 316 LALQTREQHIRREKATSNICTNQALLALAASMY-AVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELV----FDHFF 390 (450)
T ss_pred hhHHHHHHHHhhhccchhhhHHHHHHHHHHHHH-HHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEec----cccce
Confidence 01112222222 2221111 1122233 345677778888888888651 11111 11222
Q ss_pred EEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 367 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 367 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
--+.+.-+. .....+..+....|+-++... +.+-++..-..|+++|+.+++.+....
T Consensus 391 dt~~v~~~~----------~~~~~l~~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 391 DTFTVRVPE----------EVAEALLAAAIAGGINLRRVDADTVLIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred eeEEEecch----------hHHHHHHHHHHhcCCceeeecCCceEEEeecccCHHHHHHHHHHHhhhc
Confidence 222222111 024446666677788877654 457778778889999999999987653
No 381
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.12 E-value=0.00028 Score=65.19 Aligned_cols=281 Identities=13% Similarity=0.113 Sum_probs=142.6
Q ss_pred HHHHHHHHHHHhc---Cc--CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCcc
Q 013204 78 PSLDLAKELLEMF---TA--SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPA 152 (447)
Q Consensus 78 ~~~~l~~~l~~~~---~~--~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 152 (447)
...+|++.+.+++ ++ .+-..++|++|.++...+||-.+..... .....-+|+.-.|-|..+....--... ..
T Consensus 44 ~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~--~~~~p~~VVa~aPYY~~Y~~qt~~f~s-~~ 120 (363)
T PF04864_consen 44 ISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNAS--PSSSPASVVAAAPYYSSYPEQTDFFDS-RL 120 (363)
T ss_dssp S-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT---TTSSSEEEEE-SS--CHHHHHCCCT-B-TT
T ss_pred ccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCC--CCCCCceeEecCCCccchHHHHHhccc-cC
Confidence 3456666665554 22 2445899999999999999886532211 223457888888888555332211110 01
Q ss_pred ccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHH
Q 013204 153 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 232 (447)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~ 232 (447)
++ |..+. .. + .....+.+..=++..|.|+.|...- .
T Consensus 121 y~------------------w~Gda--~~---~-----------~~~~~~~~~IElVTSPNNPDG~lr~----------~ 156 (363)
T PF04864_consen 121 YK------------------WAGDA--SN---F-----------KNSDNPSPYIELVTSPNNPDGQLRE----------A 156 (363)
T ss_dssp EE------------------EEEEC--CC---G-----------TT-S-CCGEEEEEESS-TTT----------------
T ss_pred cc------------------ccccH--Hh---h-----------ccCCCCCCeEEEEeCCCCCcccccc----------h
Confidence 10 00000 00 0 0011134566678888888774321 1
Q ss_pred HHHhcCCEEEEehhhcCCCccccccccccCCCCCCee--eecccCCCcccceeEEEeCh-hHHHHhhhccCCCCccCcCC
Q 013204 233 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHGF 309 (447)
Q Consensus 233 l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v--~~sK~l~gg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~ 309 (447)
+++.-+..+|.|=+|=---.+. +. ....-|++ |+||.-|-++.|+|+.+.+. ++.+.+. .+...+
T Consensus 157 V~~g~~~k~I~D~AYYWPhyTp----I~-~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~-------~y~~ln 224 (363)
T PF04864_consen 157 VLNGSSGKVIHDLAYYWPHYTP----IT-APADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMT-------KYMELN 224 (363)
T ss_dssp SSTTTEEEEEEE-TT-STTTS--------S-B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHH-------HHHHHH
T ss_pred hcCCCCcceeeeeeeecccccc----cC-CCCCCceEEEEEecccCccccccceeeecCHHHHHHHH-------HHHHHh
Confidence 3355566779996653111110 10 11234666 67896665448999988865 4666554 334445
Q ss_pred CCCCcHHHHHHHHHHHHHHhh----h----cH----HHHHHHHHHHHHHhHhhcc-----CCC-----cee-eEeeeeeE
Q 013204 310 TYSGHPVSCAVAIEALKIYKE----R----NI----VEQVNKIAPKFQDGVKAFS-----DSP-----IIG-EIRGTGLI 366 (447)
Q Consensus 310 t~~~~~~~~~aa~a~l~~~~~----~----~~----~~~~~~~~~~l~~~L~~l~-----~~~-----~~~-~~~~~g~~ 366 (447)
|.+.+-=++..++..|+.+.+ + ++ .+.++++.++|++.+..-. +.+ ... .......+
T Consensus 225 TiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPaf 304 (363)
T PF04864_consen 225 TIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAF 304 (363)
T ss_dssp CSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SE
T ss_pred cccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCe
Confidence 666666667767777765432 1 22 2456666666766664321 110 111 12334556
Q ss_pred EEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC------CEEEEecCCCCCHHHHHHHHHHHHH
Q 013204 367 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------DNIMMSPPFIMSPEEVDELISKYGK 431 (447)
Q Consensus 367 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g------~~iR~~~~~~~t~e~i~~~~~~l~~ 431 (447)
.++.+..+.. ..+...|++.||+.+.+. ..+|++ +..++++.+.++++|.+
T Consensus 305 AWlkCe~eed------------~DC~~~l~~~~I~tr~G~~fga~~ryVRlS--ml~~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 305 AWLKCEREED------------EDCYAVLREAKIITRSGVLFGADSRYVRLS--MLKRDDDFDQLLERLSK 361 (363)
T ss_dssp EEEEESSCGG------------SSHHHHHHCTTEEEEEGGGGTS-TTEEEEE--SSS-HHHHHHHHHHHHC
T ss_pred EEEecCCccc------------ccHHHHHHhCCcccCCCCccCCCCCeEEEe--ccCCHHHHHHHHHHHHh
Confidence 6777764321 125667888899888652 579999 89999999999999875
No 382
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.11 E-value=0.00019 Score=68.07 Aligned_cols=222 Identities=15% Similarity=0.151 Sum_probs=104.3
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccccc---ccCCCCC
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC---DKYSIKP 266 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~---~~~~~~~ 266 (447)
.+.+|+.+.+.+++.+.+|+..+.... | +.| +-+++|.++|++||++.++--+|+ +.-.-....+ ...|. .
T Consensus 141 ~~~ie~~i~~~G~~~iLcvltttscfa-p-r~~--D~i~~IakiC~~~~IPhlvNnAYg-vQ~~~~~~~i~~a~~~GR-v 214 (389)
T PF05889_consen 141 LEAIEAKIEELGADNILCVLTTTSCFA-P-RLP--DDIEEIAKICKEYDIPHLVNNAYG-VQSSKCMHLIQQAWRVGR-V 214 (389)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEESSTTT-T-B------HHHHHHHHHHHT--EEEEGTTT-TT-HHHHHHHHHHHHHST-C
T ss_pred HHHHHHHHHHhCCCCeEEEEEecCccC-C-CCC--ccHHHHHHHHHHcCCceEEccchh-hhHHHHHHHHHHHHhcCC-c
Confidence 367788887776666766665554333 2 333 349999999999999999998885 5100000000 00121 2
Q ss_pred Cee--eecccCCCcccceeEEEe-ChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhh---hcHHHHHHHH
Q 013204 267 DLV--SFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKI 340 (447)
Q Consensus 267 d~v--~~sK~l~gg~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~---~~~~~~~~~~ 340 (447)
|++ ...|-|--| .+-+.+.. .+..+..+... .++. .+..+.+-. ...|..+.. ..++....+.
T Consensus 215 da~vqS~dkNF~VP-vGgai~As~~~~~i~~vs~~--YpGR-----as~sp~ld~---~itLl~LG~~g~~~ll~~r~~~ 283 (389)
T PF05889_consen 215 DAFVQSTDKNFMVP-VGGAIMASFDPSGILAVSKE--YPGR-----ASASPSLDL---FITLLSLGCTGYGALLKERKAS 283 (389)
T ss_dssp SEEEEEHHHHHCEE-SSHEEEEESSHHHHHHHHHT--SHSH-----BTSHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeecCCCEEec-CCCcEEEecCHHHHHHHHHH--hhhh-----hhcccchHH---HHHHHHHhhhHHHHHHHHHHHH
Confidence 332 345633211 11133443 45667766532 1110 111111111 111222221 2233344444
Q ss_pred HHHHHHhHhhc-cCCC-ceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEE----eeC--------
Q 013204 341 APKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VSG-------- 406 (447)
Q Consensus 341 ~~~l~~~L~~l-~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~g-------- 406 (447)
-.+++++|+++ ..+. .+.+.+.....+.+.+..-.... .+....|...|..+||.-. +.+
T Consensus 284 f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~------~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~ 357 (389)
T PF05889_consen 284 FPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEIS------QKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSS 357 (389)
T ss_dssp HHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCC------SSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS
T ss_pred HHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhc------cchhhhHHHHHHhCCcccceeeccCCCcccccCC
Confidence 45555555555 2222 11122222223344443211100 0234568888999876521 111
Q ss_pred ----CEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 407 ----DNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 407 ----~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
..+-+...+..++||||.++++|+++++
T Consensus 358 ~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 358 NYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp --SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 4566766788999999999999999875
No 383
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.07 E-value=0.0017 Score=64.69 Aligned_cols=135 Identities=18% Similarity=0.221 Sum_probs=80.8
Q ss_pred CChHHHHHHHHHHHhcCcCCCC-eEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCC-cc
Q 013204 75 TTKPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PA 152 (447)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~-~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~-~~ 152 (447)
+.....+..+..++.+ +.+ .-+.+||-|.||..++..+. + ....|.++.+.|-+...++..+|. |.
T Consensus 68 p~G~i~eAqe~aA~~f---gAd~tyFvvNGTS~ank~vi~a~~--------~-~GD~VLvdRN~HKSi~~glilaGa~Pv 135 (557)
T COG1982 68 PEGPIKEAQELAARVF---GADHTYFVVNGTSTANKAVINAVL--------T-PGDKVLVDRNCHKSIHHGLILAGATPV 135 (557)
T ss_pred CCccHHHHHHHHHHHh---CCCceEEEECCccHHHHHHHHhhc--------C-CCCEEEecCCccHHHHHHHHHcCCceE
Confidence 4445666666666665 334 44555666777777777653 2 344556688999987666766664 55
Q ss_pred ccCCCCCC-CCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHH
Q 013204 153 LHQKFDLP-APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231 (447)
Q Consensus 153 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~ 231 (447)
|..+-..+ ......++ .+.+++.+.+.......+|+..|.+ .|...- +++|.
T Consensus 136 yl~p~~np~~gi~ggI~---------------------~~~~~~~l~~~~~~~k~~vitnpTY--dGv~~n----~~~i~ 188 (557)
T COG1982 136 YLEPSRNPLYGIIGGIP---------------------LETFKEALLAHPDAEKLAVITNPTY--DGVCYN----LRKIV 188 (557)
T ss_pred EecCCCCccccccCCCC---------------------HHHHHHHHHhChhhheeEEEecCcc--ceEeec----HHHHH
Confidence 44322211 11111111 2556665544322226677777754 243333 89999
Q ss_pred HHHHhcCCEEEEehhhc
Q 013204 232 AVVKKYDILFIADEVIC 248 (447)
Q Consensus 232 ~l~~~~g~~li~DEv~~ 248 (447)
+.+..+++++.+||.+-
T Consensus 189 ~~~~~~~a~v~~deah~ 205 (557)
T COG1982 189 ELLHHYGAWVLYDEAHP 205 (557)
T ss_pred HHHhhcCceEEhhhcCc
Confidence 99999999999999984
No 384
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.04 E-value=0.014 Score=56.06 Aligned_cols=295 Identities=12% Similarity=0.075 Sum_probs=139.9
Q ss_pred EEEeCChhhHHHHHHHHHHHHHHhcCCCC----------cceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceec
Q 013204 98 VFFTNSGSEANDTQVKLVWYYNNALGRPN----------KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHT 167 (447)
Q Consensus 98 v~~~~sGseA~~~Al~~~~~~~~~~~~~~----------~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (447)
-+.-.|++|++..||-.+|.....+-+.+ .+-|..++.-.|.+..-+....+... ..+
T Consensus 142 GviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~Vkl------------R~l 209 (511)
T KOG0628|consen 142 GVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGVKL------------RAL 209 (511)
T ss_pred ceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcceeE------------EEe
Confidence 34556799999999998875443322221 12344455555665433333333221 111
Q ss_pred CCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhC-CCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehh
Q 013204 168 DCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG-PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 246 (447)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~-~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv 246 (447)
+....+ ..+ .+.|++++.+.. ..-+..+++-.+-.++ .- .-+.|.+|..+|+++|++|++|.+
T Consensus 210 ~td~n~--~mr-----------~~~L~~AIe~D~arGlIPf~v~at~GTT~-~c--a~D~l~elg~Vc~~~glWLHVDAA 273 (511)
T KOG0628|consen 210 PTDENF--GMR-----------GDTLRKAIEEDIARGLIPFFVCATLGTTS-SC--AFDELEELGPVCREEGLWLHVDAA 273 (511)
T ss_pred ecccCc--CCC-----------HHHHHHHHHHHHhCCCccEEEEEeecCcc-cc--ccccHHHhcchhhhcCEEEEeehh
Confidence 111000 000 155666655421 2335555555544333 22 235599999999999999999999
Q ss_pred hcCCCccccccccccCCCC-CCeee--ecccC-----------CCcccceeEEE-eChhHHHHhhhccCCCCccCcCCCC
Q 013204 247 ICAFGRLGTMFGCDKYSIK-PDLVS--FAKAL-----------SSAYMPIGAIL-VSPEVSEVIHSQSNTLGSFSHGFTY 311 (447)
Q Consensus 247 ~~g~g~~g~~~~~~~~~~~-~d~v~--~sK~l-----------~gg~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~t~ 311 (447)
|+|-...-+.+-.-.-|+. .|-.. .+|.+ -.| ..+.... ..+...+.-... . .+-...
T Consensus 274 YAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~-~~~~~~~~vdp~yL~h~~~~-----~-~~Dyrh 346 (511)
T KOG0628|consen 274 YAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDG-TKLSRAFNVDPLYLKHAYQG-----S-APDYRH 346 (511)
T ss_pred hccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecC-ceeeeeeecChHhhcchhhc-----c-CCCccc
Confidence 9864222111100111221 33221 23322 122 1222222 223222211111 0 111122
Q ss_pred CCcHHH----HHHHHHHHHHHhhhcHHHHHHHHHHHHHHhHhhc-cCCCceee-E-eeeeeEEEEEeecCCCCCCCCCCC
Q 013204 312 SGHPVS----CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGE-I-RGTGLILGTEFADNKSPNEPFPPE 384 (447)
Q Consensus 312 ~~~~~~----~~aa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~-~-~~~g~~~~i~~~~~~~~~~~~~~~ 384 (447)
+.-|++ ..-.+-.++.+.-+++.+++++-.+. .+...++ .+-+...- . +-.|+ +.+.+...+
T Consensus 347 wqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~L-a~~fe~lv~~d~~FE~~~~~~lgL-vcFRlk~~N--------- 415 (511)
T KOG0628|consen 347 WQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRL-AKEFETLVRADPRFEIVNKRILGL-VCFRLKGDN--------- 415 (511)
T ss_pred cccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHHHhhcCCcceeecccccce-eEEeecCCc---------
Confidence 333332 22233445555557777777764433 3333333 22221111 1 12222 233333322
Q ss_pred cchHHHHHHHHHHcC-ceEEee---CC-EEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHH
Q 013204 385 WGIGAYFGAQCEKHG-MLVRVS---GD-NIMMSPPF-IMSPEEVDELISKYGKALKATEER 439 (447)
Q Consensus 385 ~~~~~~~~~~l~~~G-i~~~~~---g~-~iR~~~~~-~~t~e~i~~~~~~l~~~l~~~~~~ 439 (447)
...+.+.+++-..| |...+. |. .||++... .+++++|++.-+.|.+...++.++
T Consensus 416 -~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~~ 475 (511)
T KOG0628|consen 416 -EINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFEA 475 (511)
T ss_pred -HHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 13555666666554 555554 33 38988653 357889999999999888876544
No 385
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=97.97 E-value=0.00097 Score=62.26 Aligned_cols=212 Identities=11% Similarity=0.086 Sum_probs=110.2
Q ss_pred CCHHHHHHHHHH-HhcCCcc-cccCcCCChHHHHHHHHHHHhcCcCCCCeEEEe---CChhhHHHHHHHHHHHHHHhcCC
Q 013204 50 SEPRLVAAATAQ-LNTLPFY-HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFT---NSGSEANDTQVKLVWYYNNALGR 124 (447)
Q Consensus 50 ~~p~v~~a~~~~-~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~---~sGseA~~~Al~~~~~~~~~~~~ 124 (447)
|..+|++|+++. +....+. ++..+........|++-.++.| +.+..++- .|||.|+..||...+
T Consensus 25 Nq~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vf---gaE~ALVRpq~vSGTHAi~~~Lfg~L-------- 93 (403)
T PF06838_consen 25 NQLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVF---GAEDALVRPQFVSGTHAIALALFGVL-------- 93 (403)
T ss_dssp HHHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHC---T-SEEEEETTS-SHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHh---CchhhhhcccccchHHHHHHHHHhcC--------
Confidence 345677777663 2221111 1222334445556667777776 55566665 499999999999664
Q ss_pred CCcceEEEEcCCCccchhhhhcccCC-ccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCC
Q 013204 125 PNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPE 203 (447)
Q Consensus 125 ~~~~~vi~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~ 203 (447)
.+.++.+..++.=--.....+...+. +.-.+.+++.+ ..+++.+... .+.+.+++.+. +
T Consensus 94 rpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y---~~v~L~~dg~-------------~D~~~i~~~~~----~ 153 (403)
T PF06838_consen 94 RPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKY---REVPLTEDGT-------------IDWEAIKKALK----P 153 (403)
T ss_dssp -TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EE---EE--B-TTSS-------------B-HHHHHHHHH----T
T ss_pred CCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCcee---EEEeecCCCC-------------cCHHHHHHhhc----c
Confidence 33477877765433333333333332 11111222211 2233222111 11366777776 4
Q ss_pred cEEEEEEccccCCCCCccCChhHHHHHHHHHHhc--CCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCCCcc
Q 013204 204 TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAY 279 (447)
Q Consensus 204 ~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~--g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~gg~ 279 (447)
++++|.+--+.+-.--...+-+.++++.+++|+. ++++.+|..|..|... .+-..+-.|++.-| |-.|||.
T Consensus 154 ~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~-----~EP~~vGADl~aGSLIKNpGGgi 228 (403)
T PF06838_consen 154 NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVET-----QEPTEVGADLMAGSLIKNPGGGI 228 (403)
T ss_dssp TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSS-----S-GGGGT-SEEEEETTSGGGTTT
T ss_pred CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccc-----cCccccchhheeccceeCCCCCc
Confidence 6778887666554432344456777777777764 7899999999877433 22234557988654 8888876
Q ss_pred ccee-EEEeChhHHHHhhh
Q 013204 280 MPIG-AILVSPEVSEVIHS 297 (447)
Q Consensus 280 ~~~g-~~~~~~~~~~~~~~ 297 (447)
.|.| ++++++++++....
T Consensus 229 AptGGYIaGr~~lVe~~a~ 247 (403)
T PF06838_consen 229 APTGGYIAGRKDLVERAAY 247 (403)
T ss_dssp -SS-EEEEESHHHHHHHHH
T ss_pred cCcCCEEechHHHHHHHHh
Confidence 6665 67889999887654
No 386
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.92 E-value=0.01 Score=55.47 Aligned_cols=202 Identities=17% Similarity=0.132 Sum_probs=117.6
Q ss_pred EEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeec--ccCCCcccce
Q 013204 205 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPI 282 (447)
Q Consensus 205 ~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~s--K~l~gg~~~~ 282 (447)
.+-|...+.....|...+...+. .. +.++++|-.-.-++| ..-+. +-|++.+| |-+|+. ++
T Consensus 145 ~ayv~~~~NeTi~Gv~v~~~p~~------~~--~~~~v~D~SS~ilsr---~iDvs----k~dviyagaQKnlGpa--Gl 207 (365)
T COG1932 145 DAYVHFCWNETISGVEVPELPDI------GS--DGLLVADASSAILSR---PIDVS----KYDVIYAGAQKNLGPA--GL 207 (365)
T ss_pred ccEEEEecCCcccceEccCCCCC------CC--CceEEEecccHHhcC---CCChh----HcceEEEehhhccCcc--ce
Confidence 44466667666667665532111 11 278888954332211 11121 24777776 888874 58
Q ss_pred eEEEeChhHHHHhhhcc--C---CCCccCcCCCCCCcHHH-HHHHHHHHHHHhhhc----HHHHHHHHHHHHHHhHhhcc
Q 013204 283 GAILVSPEVSEVIHSQS--N---TLGSFSHGFTYSGHPVS-CAVAIEALKIYKERN----IVEQVNKIAPKFQDGVKAFS 352 (447)
Q Consensus 283 g~~~~~~~~~~~~~~~~--~---~~~~~~~~~t~~~~~~~-~~aa~a~l~~~~~~~----~~~~~~~~~~~l~~~L~~l~ 352 (447)
+.++.+++++++..... . ........+++..+|+- .....-+++.++..+ +.++.++..+.|.+.+++-.
T Consensus 208 tvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~ 287 (365)
T COG1932 208 TVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSD 287 (365)
T ss_pred EEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999988875421 0 00012344566655543 333445677776643 44555556666666665532
Q ss_pred CCC-ceeeEeeeeeE-EEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC---CEEEEecCCCCCHHHHHHHHH
Q 013204 353 DSP-IIGEIRGTGLI-LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVDELIS 427 (447)
Q Consensus 353 ~~~-~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g---~~iR~~~~~~~t~e~i~~~~~ 427 (447)
-+. .+.. ..++.+ +.+.+.+.. +...|...+.++|++.--+. +.+|.+.--.++.|+++.+++
T Consensus 288 fy~~~v~~-~~RS~mnV~f~~~~~~-----------ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~ 355 (365)
T COG1932 288 FYRNLVAK-ANRSRMNVTFTLVDAE-----------LDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTD 355 (365)
T ss_pred ccccccch-hhccceeEEEEcCcHH-----------HHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHHH
Confidence 121 1111 223333 234444322 45668888888888765432 449999888889999999998
Q ss_pred HHHHHHHH
Q 013204 428 KYGKALKA 435 (447)
Q Consensus 428 ~l~~~l~~ 435 (447)
-++.+.+.
T Consensus 356 fm~~f~~~ 363 (365)
T COG1932 356 FMDWFEET 363 (365)
T ss_pred HHHHHHHh
Confidence 88877654
No 387
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.79 E-value=0.0097 Score=55.39 Aligned_cols=218 Identities=14% Similarity=0.085 Sum_probs=110.1
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhh-cCCCcccc-ccccccCCCCCC
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI-CAFGRLGT-MFGCDKYSIKPD 267 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~-~g~g~~g~-~~~~~~~~~~~d 267 (447)
.+.||+......| .++|+-.. -.+..=..++++++|.+.|++|.+|=+| +|+...|. +..+++ .|
T Consensus 178 YD~Le~~A~~frP---k~iiaG~S------aY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey----~D 244 (477)
T KOG2467|consen 178 YDKLEKTATLFRP---KLIIAGTS------AYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY----CD 244 (477)
T ss_pred hHHHHHHHHhcCC---cEEEeccc------cchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc----cc
Confidence 3667766554334 34444221 1111123789999999999999999876 45533332 222333 57
Q ss_pred eeee--cccCCCcccceeEEEeChhHHH-----------Hhhhc-cCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhc-
Q 013204 268 LVSF--AKALSSAYMPIGAILVSPEVSE-----------VIHSQ-SNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN- 332 (447)
Q Consensus 268 ~v~~--sK~l~gg~~~~g~~~~~~~~~~-----------~~~~~-~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~- 332 (447)
+|+. -|+|-| .+.|.+..++.+.. .+... +...-+..++++.. -.+++...+|+....++
T Consensus 245 iVTTTTHKsLRG--PRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHN---htIaalAvALkQa~tpef 319 (477)
T KOG2467|consen 245 IVTTTTHKSLRG--PRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHN---HTIAALAVALKQAMTPEF 319 (477)
T ss_pred eeeccccccccC--CcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCc---chHHHHHHHHHhhCCHHH
Confidence 7764 489988 47777776664321 11110 00111112232322 22333333455555555
Q ss_pred --HHHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHH---HHcCceEEe---
Q 013204 333 --IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC---EKHGMLVRV--- 404 (447)
Q Consensus 333 --~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~Gi~~~~--- 404 (447)
...++.++.+.|.+.|.++ ++.++..-.- ..++.+++....-... ..+.+.+.+ .++.-+..-
T Consensus 320 k~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTD-nHlvLvDLr~~G~dGa-------rvE~vle~~~I~~NKNtvpGD~Sa 390 (477)
T KOG2467|consen 320 KEYQKQVLKNAKALASALISR-GYKLVTGGTD-NHLVLVDLRPKGVDGA-------RVEKVLELCHIALNKNTVPGDKSA 390 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CceEecCCcc-ceEEEEeccccCCchH-------HHHHHHHHhhhhhcCCcCCCCccc
Confidence 3456677777787777765 4443322111 2244556654331110 111122211 122211110
Q ss_pred -eCCEEEEecCCC----CCHHHHHHHHHHHHHHHH
Q 013204 405 -SGDNIMMSPPFI----MSPEEVDELISKYGKALK 434 (447)
Q Consensus 405 -~g~~iR~~~~~~----~t~e~i~~~~~~l~~~l~ 434 (447)
..+.||+..|.. ..++|+++..+-|.++++
T Consensus 391 l~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 391 LSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred cCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 125699987754 357888888888877764
No 388
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.45 E-value=0.064 Score=57.33 Aligned_cols=200 Identities=11% Similarity=0.057 Sum_probs=108.3
Q ss_pred CcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEE--ehhhcCCCccccccccccCCCCCCeee-----ecccC
Q 013204 203 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA--DEVICAFGRLGTMFGCDKYSIKPDLVS-----FAKAL 275 (447)
Q Consensus 203 ~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~--DEv~~g~g~~g~~~~~~~~~~~~d~v~-----~sK~l 275 (447)
+++++|++.-.+..| .+-. +++|.+++++.|+++|+ |=. + ++..-.++ ..-.||++ ||=.|
T Consensus 207 ~~~~~v~vq~P~~~G-~i~d----~~~i~~~~h~~gal~~~~~d~l-a-L~ll~~Pg-----e~GADI~vG~~Q~fGvp~ 274 (954)
T PRK12566 207 HAVFGALLQYPDTHG-EIRD----LRPLIDQLHGQQALACVAADLL-S-LLVLTPPG-----ELGADVVLGSTQRFGVPM 274 (954)
T ss_pred CCEEEEEEECCCCce-EEcc----HHHHHHHHHHcCCEEEEEeCHH-H-HhCCCChh-----hcCCcEEeeCCCcCCCCC
Confidence 468888886655444 4422 89999999999998774 222 1 11111111 12368774 33345
Q ss_pred CCcccceeEEEeChhHHHHhhhc-----cCCCC--cc--------------CcCCCCCCcHHHHHHHHHHH-HHHhhhcH
Q 013204 276 SSAYMPIGAILVSPEVSEVIHSQ-----SNTLG--SF--------------SHGFTYSGHPVSCAVAIEAL-KIYKERNI 333 (447)
Q Consensus 276 ~gg~~~~g~~~~~~~~~~~~~~~-----~~~~~--~~--------------~~~~t~~~~~~~~~aa~a~l-~~~~~~~~ 333 (447)
+.|+.-+|++.++++++..+-.. ....+ .+ -..+..+.+..-++.+.+.. -++..+++
T Consensus 275 ~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl 354 (954)
T PRK12566 275 GYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGL 354 (954)
T ss_pred CCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHH
Confidence 55556788888888877655221 00000 00 00111122222111111111 12223333
Q ss_pred ---HHHHHHHHHHHHHhHhhccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHHHcCceEEeeC-CEE
Q 013204 334 ---VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNI 409 (447)
Q Consensus 334 ---~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~g-~~i 409 (447)
.+++..+..++.+.|.+. ++..... ..|-.+.+.-.. ....+.++.++.|+-++..+ +.+
T Consensus 355 ~~ia~~~~~~a~~l~~~l~~~-g~~~~~~----~fF~~~~v~~~~-----------~~~~~~~~a~~~~~n~r~~~~~~~ 418 (954)
T PRK12566 355 KRIAQRVHRLTAILAAGLEAK-GIKRLNR----HFFDTLTLEVGG-----------AQAAIIESAEAARINLRILGRGRL 418 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCccccC----CccceEEEEccC-----------CHHHHHHHHHHCCCeeEEeCCCeE
Confidence 345666777888888774 3322211 112122222110 13457788889999988664 568
Q ss_pred EEecCCCCCHHHHHHHHHHHH
Q 013204 410 MMSPPFIMSPEEVDELISKYG 430 (447)
Q Consensus 410 R~~~~~~~t~e~i~~~~~~l~ 430 (447)
.++.--.+|.+|++.+++.+.
T Consensus 419 ~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 419 GVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred EEEeCCCCCHHHHHHHHHHhc
Confidence 888888899999999999984
No 389
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.16 E-value=0.016 Score=52.85 Aligned_cols=196 Identities=16% Similarity=0.244 Sum_probs=106.4
Q ss_pred cCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccc----cccccC---CCCCCee--eecccCCCcccceeE
Q 013204 214 IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM----FGCDKY---SIKPDLV--SFAKALSSAYMPIGA 284 (447)
Q Consensus 214 ~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~----~~~~~~---~~~~d~v--~~sK~l~gg~~~~g~ 284 (447)
.+.+| +-|+.+-...|.+.-++.+.+..+|-+|.|| ..|.. |+..++ | .+=++ .|+|-+|-=.-++|.
T Consensus 188 hNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGf-ASGD~~~DawAiR~fV~~g-~e~fv~QSFaKNfGlYneRvGn 264 (410)
T KOG1412|consen 188 HNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGF-ASGDLDADAWAIRYFVEQG-FELFVCQSFAKNFGLYNERVGN 264 (410)
T ss_pred cCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhccc-ccCCccccHHHHHHHHhcC-CeEEEEhhhhhhcccccccccc
Confidence 44444 7889999999999999999999999999999 56642 333222 2 12233 378966531146664
Q ss_pred ---EEeChhHHHHhhhccCCCCccCcCCCCCCcHHHHHHHHHHHHHHhhhcH-----------HHHHHHHHHHHHHhHhh
Q 013204 285 ---ILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI-----------VEQVNKIAPKFQDGVKA 350 (447)
Q Consensus 285 ---~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~-----------~~~~~~~~~~l~~~L~~ 350 (447)
++-++..+..+... . ....-.+++ ||.+..|-+ +-+++..+++ -.++++++..|++.|..
T Consensus 265 ltvv~~n~a~i~~v~SQ---l-~lviR~~~S-NPPAyGArI-V~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~a 338 (410)
T KOG1412|consen 265 LTVVVNNPAVIAGVKSQ---L-TLVIRSNWS-NPPAYGARI-VHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVA 338 (410)
T ss_pred eEEEecChhHHHHHHHH---H-HHHHhhccC-CCcchhhHH-HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44456666555431 1 111112333 343333222 2233333322 24555666667777777
Q ss_pred ccCCCceeeEeeeeeEEEEEeecCCCCCCCCCCCcchHHHHHHHHH-HcCceEEeeCCEEEEecCCCCCHHHHHHHHHHH
Q 013204 351 FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSGDNIMMSPPFIMSPEEVDELISKY 429 (447)
Q Consensus 351 l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~g~~iR~~~~~~~t~e~i~~~~~~l 429 (447)
|..-+-...+..+-.| +.+..- ...-.+.|. .+.|+....| +|-++ ..+...++...+++
T Consensus 339 L~TPGtWDHI~~QiGM--FSyTGL-------------tp~qV~~li~~h~vyLl~~G-RInis---GLN~~NveyVAkAI 399 (410)
T KOG1412|consen 339 LKTPGTWDHITQQIGM--FSYTGL-------------TPAQVDHLIENHKVYLLSDG-RINIS---GLNMKNVEYVAKAI 399 (410)
T ss_pred cCCCCcHHHHHhhccc--eeecCC-------------CHHHHHHHHHhceEEEecCC-cEeee---ccccccHHHHHHHH
Confidence 6221111111111112 222221 112345555 4566666554 45555 67888899999998
Q ss_pred HHHHHHHH
Q 013204 430 GKALKATE 437 (447)
Q Consensus 430 ~~~l~~~~ 437 (447)
.+++..+.
T Consensus 400 de~Vr~~~ 407 (410)
T KOG1412|consen 400 DETVRAIK 407 (410)
T ss_pred HHHHHhhc
Confidence 88877654
No 390
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=95.62 E-value=0.076 Score=44.39 Aligned_cols=59 Identities=10% Similarity=0.081 Sum_probs=45.9
Q ss_pred cCCChHHHHHHHHHHHhcC---cCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCcc
Q 013204 73 NRTTKPSLDLAKELLEMFT---ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHG 139 (447)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~---~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg 139 (447)
.+..+....+++.+.+.+. ..++++|++++|+++|++.+++.+. ...+.|++.+|.|+|
T Consensus 92 ~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~--------dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 92 HGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIA--------DPGDAFLVPTPYYAA 153 (153)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHc--------CCCCEEEEeCCCCCC
Confidence 4456667777777777654 2467899999999999999999774 445889999999975
No 391
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=95.61 E-value=0.085 Score=47.04 Aligned_cols=56 Identities=18% Similarity=0.203 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc
Q 013204 189 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 248 (447)
Q Consensus 189 ~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~ 248 (447)
+++.+++.+...+++.+-+|......- -+-.++-+++|..+|..|+++-|+..+|.
T Consensus 142 dleav~~~iee~g~dcilci~sttscf----apr~pd~leaiaaica~~diphivnnayg 197 (432)
T KOG3843|consen 142 DLEAVEAIIEELGEDCILCIHSTTSCF----APRSPDNLEAIAAICAAHDIPHIVNNAYG 197 (432)
T ss_pred hHHHHHHHHHHhCCceEEEEeeccccc----CCCCCchHHHHHHHHHccCchhhhccccc
Confidence 357777778877776665555544322 12234569999999999999999988763
No 392
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=95.11 E-value=1.2 Score=40.82 Aligned_cols=185 Identities=13% Similarity=0.079 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHhcCc-CCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCCccchhhhhcccCCc-cccC
Q 013204 78 PSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQ 155 (447)
Q Consensus 78 ~~~~l~~~l~~~~~~-~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~-~~~~ 155 (447)
....|.+-.++.|.. ...-|.-| -|||.|+..|+.-.+ ...+..+...++--....-.+...+.. .-.+
T Consensus 66 GRdtLe~vyA~vf~aE~a~VRpq~-isGTHAI~~aLfg~L--------RpgDell~i~G~PYDTLeevIG~rg~~~gSL~ 136 (416)
T COG4100 66 GRDTLERVYAQVFGAEAALVRPQI-ISGTHAIACALFGIL--------RPGDELLYITGSPYDTLEEVIGLRGEGQGSLK 136 (416)
T ss_pred chhHHHHHHHHHhccccceeeeee-ecchhHHHHHHHhcc--------CCCCeEEEecCCcchhHHHHhccCCCCcccHH
Confidence 344566666666632 12223333 379999999998553 334677776654323322222222211 0011
Q ss_pred CCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHH
Q 013204 156 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 235 (447)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~ 235 (447)
.+++... .++... -+..+.+.+++.+. +++++|.+.-..+-+---..+-+.++++.++.|
T Consensus 137 dfgi~Y~---~v~Lt~-------------~gkiD~~~v~~~i~----~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk 196 (416)
T COG4100 137 DFGIKYK---AVPLTA-------------DGKIDIQAVKTAIS----DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVK 196 (416)
T ss_pred HhCccee---eccccc-------------CCcccHHHHHHhcC----ccceEEEEEeccCcCCCCcccHHHHHHHHHHHH
Confidence 1222111 111111 11122355555554 567788776655443111223366788888888
Q ss_pred hc--CCEEEEehhhcCCCccccccccccCCCCCCeee--ecccCCCcccce-eEEEeChhHHHHhh
Q 013204 236 KY--DILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSPEVSEVIH 296 (447)
Q Consensus 236 ~~--g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~--~sK~l~gg~~~~-g~~~~~~~~~~~~~ 296 (447)
+- ++++.+|..|..|... .+-..+-.|++. +=|-.|||.... |++.+++++++...
T Consensus 197 ~inpn~ivFVDNCYGEFvE~-----~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 197 EINPNVIVFVDNCYGEFVEE-----KEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred hcCCCEEEEEeccchhhhhc-----cCccccchhhhccceeeCCCCceeeccceeechHHHHHhhc
Confidence 65 5788899988766332 223345578775 447777654433 46778888887753
No 393
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=92.34 E-value=1.8 Score=40.60 Aligned_cols=91 Identities=18% Similarity=0.264 Sum_probs=55.5
Q ss_pred CcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcccccc----ccccC-CCCCCee---eeccc
Q 013204 203 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF----GCDKY-SIKPDLV---SFAKA 274 (447)
Q Consensus 203 ~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~----~~~~~-~~~~d~v---~~sK~ 274 (447)
..+-++.....+++| +-|+.+-+++|.++.++.+.+-++|-+|.|| ..|... +...+ ..--++. .|+|-
T Consensus 198 gs~ilLhaCaHNPTG--vDPt~eqw~ki~~~~~~k~~~pffDmAYQGf-aSG~~d~DA~avR~F~~~g~~~~laQSyAKN 274 (427)
T KOG1411|consen 198 GSIILLHACAHNPTG--VDPTKEQWEKISDLIKEKNLLPFFDMAYQGF-ASGDLDKDAQAVRLFVEDGHEILLAQSYAKN 274 (427)
T ss_pred CcEEEeehhhcCCCC--CCccHHHHHHHHHHhhhccccchhhhhhccc-ccCCchhhHHHHHHHHHcCCceEeehhhhhh
Confidence 444333344445555 7889999999999999999999999999999 455321 11111 0011222 47897
Q ss_pred CCCcccceeE---EEeChhHHHHhh
Q 013204 275 LSSAYMPIGA---ILVSPEVSEVIH 296 (447)
Q Consensus 275 l~gg~~~~g~---~~~~~~~~~~~~ 296 (447)
||-=+-++|+ ++-+++....+.
T Consensus 275 MGLYgERvGa~svvc~~ad~A~rV~ 299 (427)
T KOG1411|consen 275 MGLYGERVGALSVVCKDADEAKRVE 299 (427)
T ss_pred cchhhhccceeEEEecCHHHHHHHH
Confidence 7641135554 444556655554
No 394
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=68.85 E-value=1.5e+02 Score=30.86 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCceEEeeC-CEEEEecCCCCCHHHHHHHHHHHH
Q 013204 388 GAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYG 430 (447)
Q Consensus 388 ~~~~~~~l~~~Gi~~~~~g-~~iR~~~~~~~t~e~i~~~~~~l~ 430 (447)
.+.+..+..+++|-.+-.. +.|-+++--+.+++|+|.++..+.
T Consensus 435 ~~~~l~rA~~~~iNlr~~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 435 AEEVLDRAAKRQINLRLVEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred HHHHHHHHHhhcCceEEeecCceEEeecccccHHHHHHHHHHHc
Confidence 3456677778888777654 458888777889999999999986
No 395
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=63.46 E-value=32 Score=32.36 Aligned_cols=36 Identities=11% Similarity=0.301 Sum_probs=28.8
Q ss_pred EEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehh
Q 013204 207 AFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 246 (447)
Q Consensus 207 ~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv 246 (447)
.|++..+-+.+ + +.+++.+|.++|+++|+.+++|-.
T Consensus 132 ~VvlsGSlP~g--~--~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 132 IVVLSGSLPPG--V--PPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred EEEEeCCCCCC--C--CHHHHHHHHHHHHhcCCeEEEECC
Confidence 36776666654 3 568999999999999999999943
No 396
>smart00642 Aamy Alpha-amylase domain.
Probab=61.67 E-value=21 Score=30.24 Aligned_cols=45 Identities=18% Similarity=0.161 Sum_probs=32.4
Q ss_pred cEEEEEEccccCCCC-------C----------ccCChhHHHHHHHHHHhcCCEEEEehhhc
Q 013204 204 TIAAFIAEPVIGAGG-------V----------IPPPATYFEKVQAVVKKYDILFIADEVIC 248 (447)
Q Consensus 204 ~~a~vi~epv~~~~G-------~----------~~~~~~~l~~l~~l~~~~g~~li~DEv~~ 248 (447)
.+.+|.+.|++.... . ..-+.+.++++++-|+++|+.+|+|=|..
T Consensus 32 G~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 32 GVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred CCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 456788888753331 0 11234779999999999999999997754
No 397
>COG0821 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Lipid metabolism]
Probab=57.10 E-value=1.5e+02 Score=28.10 Aligned_cols=27 Identities=15% Similarity=0.271 Sum_probs=23.3
Q ss_pred ccCChhHHHHHHHHHHhcCCEEEEehh
Q 013204 220 IPPPATYFEKVQAVVKKYDILFIADEV 246 (447)
Q Consensus 220 ~~~~~~~l~~l~~l~~~~g~~li~DEv 246 (447)
.+|..+-.+.+.+++++-+++||.|=-
T Consensus 56 tv~~~e~A~A~~~Ik~~~~vPLVaDiH 82 (361)
T COG0821 56 TVPDMEAAEALKEIKQRLNVPLVADIH 82 (361)
T ss_pred ecCCHHHHHHHHHHHHhCCCCEEEEee
Confidence 567778899999999999999999943
No 398
>COG0648 Nfo Endonuclease IV [DNA replication, recombination, and repair]
Probab=56.81 E-value=61 Score=30.00 Aligned_cols=55 Identities=15% Similarity=0.189 Sum_probs=40.6
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcC-CEEEEehhhc
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD-ILFIADEVIC 248 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g-~~li~DEv~~ 248 (447)
.+.|.+++.. . . ..++.|..-+.|..+.-.-+.|+++.+++++.+ +-+++|-.|+
T Consensus 124 ~~~Ln~~~~~-~--~-v~i~~e~~agegs~~g~~F~~L~eii~~~~~~~~igvCiDtcH~ 179 (280)
T COG0648 124 AEALNELLEE-E--G-VIILLENTAGEGSGKGTQFGELAEIIDLIEEKERIGVCIDTCHA 179 (280)
T ss_pred HHHHHHHhhc-c--C-CeEEEEEeccccCccccchhhHHHHHHhhcccCceEEEEEchhh
Confidence 4556665553 1 2 356667776666666667788999999999987 9999998887
No 399
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=51.64 E-value=1e+02 Score=23.30 Aligned_cols=58 Identities=14% Similarity=0.200 Sum_probs=36.0
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCC-EEEEehhhc
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI-LFIADEVIC 248 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~-~li~DEv~~ 248 (447)
+++++.+....+- .+..-++-.............+-+++|.++++++++ ++|+|.-.+
T Consensus 10 l~El~~L~~t~g~-~vv~~~~q~~~~~~p~~~iG~GK~eei~~~~~~~~~d~vvfd~~Ls 68 (95)
T PF13167_consen 10 LEELEELAETAGY-EVVGTVVQKRRKPDPKTYIGSGKVEEIKELIEELDADLVVFDNELS 68 (95)
T ss_pred HHHHHHHHHHCCC-eEEEEEEecCCCCCcceeechhHHHHHHHHHhhcCCCEEEECCCCC
Confidence 5778887777653 444433333222222244466889999999999988 666775433
No 400
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=51.22 E-value=35 Score=29.32 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=28.0
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCC----hhHHHHHHHHHHhcCCEEEE
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPP----ATYFEKVQAVVKKYDILFIA 243 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~----~~~l~~l~~l~~~~g~~li~ 243 (447)
+.+++.+... ..+.+|++|+.+...+.-.-. ..++..+.++|+++|+.+++
T Consensus 130 ~~l~~~~~~~--~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 130 EELEAALKEL--YGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHTT------SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHhhc--CCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 4455555431 246799999987654321111 35889999999999987763
No 401
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=48.55 E-value=34 Score=29.75 Aligned_cols=36 Identities=17% Similarity=0.216 Sum_probs=28.6
Q ss_pred CcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEE
Q 013204 203 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 243 (447)
Q Consensus 203 ~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~ 243 (447)
-..++||+|-++..|+ ... .+++.+++++||+.+|.
T Consensus 155 l~Pa~VicEi~~~dG~-mar----~~~~~~fa~~h~l~~it 190 (203)
T COG0108 155 LKPAGVICEIMNDDGT-MAR----LPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCCcEEEEEEeCCCcc-ccC----hHHHHHHHHHcCCcEEE
Confidence 3458999999887554 444 78899999999999884
No 402
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=45.30 E-value=2.1e+02 Score=26.61 Aligned_cols=47 Identities=26% Similarity=0.116 Sum_probs=32.1
Q ss_pred HHHHHHHHHHcCceEEeeC---CEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 013204 388 GAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVDELISKYGKALK 434 (447)
Q Consensus 388 ~~~~~~~l~~~Gi~~~~~g---~~iR~~~~~~~t~e~i~~~~~~l~~~l~ 434 (447)
-..|.....+++.+---+. +.+|-+.--.++-++.+.++.-+++..+
T Consensus 318 e~eFLkeA~~~~mv~LKGhRSVGGiRASlYNAisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 318 EAEFLKEAAKEHMVQLKGHRSVGGIRASLYNAISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred HHHHHHHHHHhhhhccccccccccchhhhhccccHHHHHHHHHHHHHHHH
Confidence 4456666666665533222 4589997777899999988888877654
No 403
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=44.12 E-value=2.2e+02 Score=24.88 Aligned_cols=48 Identities=8% Similarity=0.038 Sum_probs=32.8
Q ss_pred HHHHHHHHhhCC-CcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEe
Q 013204 191 NNLEDLILKEGP-ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 244 (447)
Q Consensus 191 ~~le~~l~~~~~-~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~D 244 (447)
.++-+.+...+. ..+.+|+++-.| ..+++....+.+++.+.|+++|+=
T Consensus 68 ~~i~~~i~~~~~~~~~~~v~IDEaQ------F~~~~~v~~l~~lad~lgi~Vi~~ 116 (201)
T COG1435 68 TDIFDEIAALHEKPPVDCVLIDEAQ------FFDEELVYVLNELADRLGIPVICY 116 (201)
T ss_pred HHHHHHHHhcccCCCcCEEEEehhH------hCCHHHHHHHHHHHhhcCCEEEEe
Confidence 344444443222 226788888876 346677899999999999999965
No 404
>PRK13505 formate--tetrahydrofolate ligase; Provisional
Probab=42.06 E-value=3.6e+02 Score=27.73 Aligned_cols=52 Identities=12% Similarity=0.100 Sum_probs=33.2
Q ss_pred HHHHHHHHhhCC-CcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc
Q 013204 191 NNLEDLILKEGP-ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 248 (447)
Q Consensus 191 ~~le~~l~~~~~-~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~ 248 (447)
.+|++.+..... .-..+|.++-.. ..+++.++.|.++|++.|+.+++=+++.
T Consensus 359 ~NL~RHIenvr~FGvPvVVAINKFd------~DTe~Ei~~I~~~c~e~Gv~va~~~~~~ 411 (557)
T PRK13505 359 ANLERHIENIRKFGVPVVVAINKFV------TDTDAEIAALKELCEELGVEVALSEVWA 411 (557)
T ss_pred HHHHHHHHHHHHcCCCEEEEEeCCC------CCCHHHHHHHHHHHHHcCCCEEEecccc
Confidence 556666655322 223344444321 2245689999999999999888777665
No 405
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=41.39 E-value=1.6e+02 Score=27.97 Aligned_cols=26 Identities=15% Similarity=0.201 Sum_probs=23.0
Q ss_pred ccCChhHHHHHHHHHHhcCCEEEEeh
Q 013204 220 IPPPATYFEKVQAVVKKYDILFIADE 245 (447)
Q Consensus 220 ~~~~~~~l~~l~~l~~~~g~~li~DE 245 (447)
.+|+.+-.+.+.+++++..++||.|=
T Consensus 54 avp~~~~A~al~~I~~~~~iPlVADI 79 (346)
T TIGR00612 54 TVPDRESAAAFEAIKEGTNVPLVADI 79 (346)
T ss_pred cCCCHHHHHhHHHHHhCCCCCEEEee
Confidence 56778889999999999999999993
No 406
>TIGR00629 uvde UV damage endonuclease UvdE. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=38.62 E-value=3.5e+02 Score=25.62 Aligned_cols=21 Identities=24% Similarity=0.317 Sum_probs=18.8
Q ss_pred HHHHHHHHHhcCCEEEEehhh
Q 013204 227 FEKVQAVVKKYDILFIADEVI 247 (447)
Q Consensus 227 l~~l~~l~~~~g~~li~DEv~ 247 (447)
++++..+|++-++++++|=.|
T Consensus 201 l~evL~lc~e~~iP~v~D~hH 221 (312)
T TIGR00629 201 VEDLLPVCEELNIPFVLDFHH 221 (312)
T ss_pred HHHHHHHHHhcCCCEEEEhHH
Confidence 899999999999999999444
No 407
>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=37.81 E-value=3e+02 Score=24.69 Aligned_cols=152 Identities=14% Similarity=0.175 Sum_probs=83.7
Q ss_pred CCHHHHHHHHHHHhcCCcccccCcCCChHHHHHHHHHHHhcCcCCCCeEE-Ee-CChhhHHHHHHHHHHHHHHhcCCCCc
Q 013204 50 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVF-FT-NSGSEANDTQVKLVWYYNNALGRPNK 127 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~-~~-~sGseA~~~Al~~~~~~~~~~~~~~~ 127 (447)
..|++.+.+.+...+.+..... ....+....+...+.+.+.+ .+++ +. =+|+.|...|+.+ +.+
T Consensus 33 ~e~~~l~el~e~t~~~~~~~~~-m~v~~d~g~fl~~li~~~~a---k~~lelGvfTGySaL~~Alal----------p~d 98 (237)
T KOG1663|consen 33 REPELLKELREATLTYPQPGSE-MLVGPDKGQFLQMLIRLLNA---KRTLELGVFTGYSALAVALAL----------PED 98 (237)
T ss_pred CCcHHHHHHHHHHhhcCCcccc-eecChHHHHHHHHHHHHhCC---ceEEEEecccCHHHHHHHHhc----------CCC
Confidence 5677787888777554311111 22445566777777777632 2332 22 2788888777765 456
Q ss_pred ceEEEEcCCCccchhhhhcccCCccccCCCCCCCCcceecCCCCcccCCCCCCChhHHHHHHHHHHHHHHHhhCCCcEEE
Q 013204 128 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAA 207 (447)
Q Consensus 128 ~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a~ 207 (447)
.+|+.++-.--....+ ....... +.. +.+++- .....+.|++++.+..+++.-.
T Consensus 99 Grv~a~eid~~~~~~~-~~~~k~a------gv~----~KI~~i---------------~g~a~esLd~l~~~~~~~tfDf 152 (237)
T KOG1663|consen 99 GRVVAIEIDADAYEIG-LELVKLA------GVD----HKITFI---------------EGPALESLDELLADGESGTFDF 152 (237)
T ss_pred ceEEEEecChHHHHHh-HHHHHhc------ccc----ceeeee---------------ecchhhhHHHHHhcCCCCceeE
Confidence 7888886443222111 0000000 000 001100 0001377888887655667778
Q ss_pred EEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc
Q 013204 208 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 248 (447)
Q Consensus 208 vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~ 248 (447)
+.++.---+. . .+.+++..+.|. |.++++|-|..
T Consensus 153 aFvDadK~nY--~----~y~e~~l~Llr~-GGvi~~DNvl~ 186 (237)
T KOG1663|consen 153 AFVDADKDNY--S----NYYERLLRLLRV-GGVIVVDNVLW 186 (237)
T ss_pred EEEccchHHH--H----HHHHHHHhhccc-ccEEEEecccc
Confidence 8888764332 1 567888888875 77788898765
No 408
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=37.71 E-value=91 Score=26.86 Aligned_cols=52 Identities=17% Similarity=0.289 Sum_probs=28.9
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCC----CC-CccCChhHHHHHHHHHHhcCCEEE
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGA----GG-VIPPPATYFEKVQAVVKKYDILFI 242 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~----~G-~~~~~~~~l~~l~~l~~~~g~~li 242 (447)
+.+++++..........|++.|.... ++ ....-..+-+.+.++|+++|+.++
T Consensus 94 ~nl~~ii~~~~~~~~~~il~tp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 150 (198)
T cd01821 94 EYLRRYIAEARAKGATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLI 150 (198)
T ss_pred HHHHHHHHHHHHCCCeEEEECCccccccCCCCcccccchhHHHHHHHHHHHhCCCEE
Confidence 44444443322223456677765311 11 112234677889999999999885
No 409
>COG1349 GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]
Probab=34.97 E-value=3.5e+02 Score=24.61 Aligned_cols=49 Identities=22% Similarity=0.304 Sum_probs=34.5
Q ss_pred cEEEEEEccccCCCCCccCChhHHHHHHHHHHh-cCCEEEEehhhcCCCccc
Q 013204 204 TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK-YDILFIADEVICAFGRLG 254 (447)
Q Consensus 204 ~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~-~g~~li~DEv~~g~g~~g 254 (447)
+.+.+-+..+...+|...+..+...--+.+++. ...++++| ++-||+.+
T Consensus 166 d~aFig~~gi~~~~g~~~~~~~ea~~k~~~~~~a~~~~ll~D--~sKf~~~~ 215 (253)
T COG1349 166 DKAFIGADGIDLEGGLTTFNEEEAEVKRAMIEAAREVILLAD--SSKFGRVA 215 (253)
T ss_pred cEEEEeccccCCCCCcCcCCHHHHHHHHHHHHhhCcEEEEEc--CCccCCce
Confidence 577888888888888877776555555555553 46788899 55566654
No 410
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=34.58 E-value=82 Score=26.35 Aligned_cols=52 Identities=8% Similarity=0.082 Sum_probs=26.6
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEE
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 242 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li 242 (447)
+.+++++..........+++.+..+..-.......+-+.+.++|+++++.++
T Consensus 88 ~~l~~li~~~~~~~~~vil~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 139 (177)
T cd01822 88 ANLRQMIETAQARGAPVLLVGMQAPPNYGPRYTRRFAAIYPELAEEYGVPLV 139 (177)
T ss_pred HHHHHHHHHHHHCCCeEEEEecCCCCccchHHHHHHHHHHHHHHHHcCCcEe
Confidence 3444444332222344566654322211111234566778889999998766
No 411
>KOG2433 consensus Uncharacterized conserved protein [Function unknown]
Probab=34.19 E-value=2e+02 Score=27.89 Aligned_cols=85 Identities=20% Similarity=0.283 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHHhcCCc--ccccCcCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcC----
Q 013204 50 SEPRLVAAATAQLNTLPF--YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG---- 123 (447)
Q Consensus 50 ~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~---- 123 (447)
.|-+|.+++.+.-++... +++-|-+..+...-| .+++ . -..+++++++|+|-.+.+-.+++.... .|
T Consensus 434 tHrEiQqaLvdi~DKpA~FVGSrQWIGStEis~vL----n~ll-~-~~skil~v~sGaEva~~~rELA~HFqt-~GTPVM 506 (577)
T KOG2433|consen 434 THREIQQALVDIQDKPAKFVGSRQWIGSTEISFVL----NELL-K-LESKILAVNSGAEVAERVRELARHFQT-SGTPVM 506 (577)
T ss_pred cHHHHHHHHHhccCcccceecccceecchhHHHHH----HHHh-c-cceEEEEeccccHHHHHHHHHHHHhhc-cCCcEE
Confidence 567888888877665322 223233333333222 2232 1 123799999999999998888864321 11
Q ss_pred -----------------CCCcceEEEEcCCCccch
Q 013204 124 -----------------RPNKKKFIARQKSYHGST 141 (447)
Q Consensus 124 -----------------~~~~~~vi~~~~~yhg~~ 141 (447)
.+|..++++++|.|-|..
T Consensus 507 IGGgvLAHTIlGVd~n~~TGq~KFLILDPHYTGae 541 (577)
T KOG2433|consen 507 IGGGVLAHTILGVDFNDTTGQTKFLILDPHYTGAE 541 (577)
T ss_pred EccceeeeeEeeeeeecccCceEEEEeCCCcCChh
Confidence 134567777777777663
No 412
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=34.01 E-value=38 Score=29.95 Aligned_cols=48 Identities=19% Similarity=0.241 Sum_probs=29.4
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEeh
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADE 245 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DE 245 (447)
+.+|+.+. ..-+...+-+-..+.- . -.+..+++.++|++|++.||+++
T Consensus 25 ~~ve~al~---~Gv~~vQlR~K~~~~~---~-~~~~a~~~~~lc~~~~v~liINd 72 (211)
T COG0352 25 EWVEAALK---GGVTAVQLREKDLSDE---E-YLALAEKLRALCQKYGVPLIIND 72 (211)
T ss_pred HHHHHHHh---CCCeEEEEecCCCChH---H-HHHHHHHHHHHHHHhCCeEEecC
Confidence 55666665 2334444444432221 0 04567899999999999888853
No 413
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=33.22 E-value=1.6e+02 Score=19.99 Aligned_cols=45 Identities=18% Similarity=0.282 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHcCceEEeeC-CEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 387 IGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 387 ~~~~~~~~l~~~Gi~~~~~g-~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
....+.+.|.+.|+-+.... ..+.++ +...+++.++++++|.+.+
T Consensus 17 i~~~if~aL~~~~I~v~~~~~Se~~is--~~v~~~~~~~av~~Lh~~f 62 (64)
T cd04937 17 VMAKIVGALSKEGIEILQTADSHTTIS--CLVSEDDVKEAVNALHEAF 62 (64)
T ss_pred HHHHHHHHHHHCCCCEEEEEcCccEEE--EEEcHHHHHHHHHHHHHHh
Confidence 45567788889998886554 446777 6789999999999888765
No 414
>PLN02672 methionine S-methyltransferase
Probab=31.35 E-value=5e+02 Score=29.38 Aligned_cols=49 Identities=18% Similarity=0.119 Sum_probs=30.9
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehh
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 246 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv 246 (447)
+.+.+++++.++ + .|+..--+.+- .+-.-++.|...+++.|+.|+.|+.
T Consensus 517 ~~~~~~~~~~~~-~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 517 DLVIELIKKLKP-Q--VVVTGMADFEM----RTSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred hHHHHHHHhCCC-e--EEEEeccchhh----hhHHHHHHHHHHHHhhCcEEEEehh
Confidence 445566666555 2 33332222221 1334488999999999999999976
No 415
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=31.14 E-value=1.5e+02 Score=20.20 Aligned_cols=44 Identities=11% Similarity=0.152 Sum_probs=32.7
Q ss_pred HHHHHHHHHHcCceEEeeC-CEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 388 GAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 388 ~~~~~~~l~~~Gi~~~~~g-~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
...+.+.|.+.++....-+ +.++++ +..++++.++++.+|-+.+
T Consensus 17 ~~~~~~~L~~~~i~~i~~~~s~~~is--~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 17 LGPALEVFGKKPVHLVSQAANDLNLT--FVVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHHhcCCceEEEEeCCCCeEE--EEEeHHHHHHHHHHHHHHH
Confidence 4456667777788776554 447887 7789999999999987654
No 416
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=30.57 E-value=93 Score=27.11 Aligned_cols=38 Identities=16% Similarity=0.282 Sum_probs=28.1
Q ss_pred cEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEE-ehh
Q 013204 204 TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA-DEV 246 (447)
Q Consensus 204 ~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~-DEv 246 (447)
+.+++++|-++.. |.... .+++.+++++||+.+|. +|+
T Consensus 152 ~p~avi~eil~~d-G~~~~----~~~~~~fA~~~~l~~vsi~dl 190 (194)
T PF00926_consen 152 SPVAVICEILDDD-GDMAR----RDELEEFAKKHGLPIVSIEDL 190 (194)
T ss_dssp -SBEEEEEBBETT-SSBHC----HHHHHHHHHHTT-EEEEHHHH
T ss_pred CCcEEEEEEeCCC-CCcCC----HHHHHHHHHHcCCcEEEHHHH
Confidence 4578999988764 45555 89999999999999984 443
No 417
>COG1453 Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only]
Probab=29.92 E-value=5.1e+02 Score=25.16 Aligned_cols=60 Identities=17% Similarity=0.271 Sum_probs=35.2
Q ss_pred CCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCeeeecccCC
Q 013204 202 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALS 276 (447)
Q Consensus 202 ~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK~l~ 276 (447)
....+++|+||.-+-+=...+ =+++.++|+.++. -++...|++.+..-.|.+.+++-++.
T Consensus 194 ~~~~gI~IMeP~~gG~l~~~v----P~~~~~l~~~~~~-----------~~sP~~wa~R~~~shp~V~~vlsGm~ 253 (391)
T COG1453 194 SKGLGIFIMEPLDGGGLLYNV----PEKLEELCRPASP-----------KRSPAEWALRYLLSHPEVTTVLSGMN 253 (391)
T ss_pred hCCCcEEEEeeCCCCCcccCC----CHHHHHHHHhcCC-----------CCCcHHHHHHHHhcCCCeEEEecCCC
Confidence 356789999998765422312 2677888887642 13333455544434566666654443
No 418
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=29.32 E-value=1.2e+02 Score=26.64 Aligned_cols=34 Identities=21% Similarity=0.247 Sum_probs=27.0
Q ss_pred EEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEE
Q 013204 205 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 243 (447)
Q Consensus 205 ~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~ 243 (447)
.+++|+|-++. .|.... .+++.+++++||+.+|.
T Consensus 158 p~~vicEil~~-dG~m~~----~~~~~~fA~~~~l~~is 191 (199)
T TIGR00506 158 PAGVICEMMND-DGTMAR----KPELMEYAKKHNLKLIS 191 (199)
T ss_pred ceEEEEEEeCC-CCCccC----HHHHHHHHHHcCCcEEE
Confidence 57888888765 444554 78999999999999984
No 419
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=28.83 E-value=2.2e+02 Score=28.85 Aligned_cols=43 Identities=12% Similarity=0.142 Sum_probs=27.5
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEE
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 242 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li 242 (447)
.+|.+++...+..++.+|++||..+.- .+.+..++++.|+.++
T Consensus 407 ~~L~~Li~~IK~~~V~~IF~Epq~~~~---------~~~l~~IA~e~Gv~V~ 449 (479)
T TIGR03772 407 ADRRRLTRTIENLKVPAVFLEPNLAAR---------STTLNEIADELGVRVC 449 (479)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCc---------hHHHHHHHHHcCCcEE
Confidence 344444433334678899999976531 3556778888888653
No 420
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=28.18 E-value=2.6e+02 Score=25.90 Aligned_cols=41 Identities=10% Similarity=0.128 Sum_probs=23.5
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEE
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 242 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li 242 (447)
.++.+++.......+.+|++||..+. +.+..++++.|+.++
T Consensus 207 ~~l~~l~~~ik~~~v~~if~e~~~~~-----------~~~~~la~~~g~~v~ 247 (282)
T cd01017 207 KQLAELVEFVKKSDVKYIFFEENASS-----------KIAETLAKETGAKLL 247 (282)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCh-----------HHHHHHHHHcCCcEE
Confidence 33444433333456788899886542 233456777787554
No 421
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=27.53 E-value=1.3e+02 Score=23.75 Aligned_cols=45 Identities=11% Similarity=0.052 Sum_probs=28.6
Q ss_pred HHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEE
Q 013204 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 243 (447)
Q Consensus 192 ~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~ 243 (447)
.+.+.+.......++++++....... -. -+++.+.|++++.+||.
T Consensus 60 ~~~~~i~~L~~~~~agL~i~~~~~~~--~i-----P~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 60 ELREFIRELAEKGAAGLGIKTGRYLD--EI-----PEEIIELADELGLPLIE 104 (123)
T ss_pred HHHHHHHHHHHCCCeEEEEeccCccc--cC-----CHHHHHHHHHcCCCEEE
Confidence 34455544334567788876642221 22 37899999999999883
No 422
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=27.27 E-value=71 Score=33.28 Aligned_cols=33 Identities=21% Similarity=0.146 Sum_probs=29.0
Q ss_pred ChhHHHHHHHHHHhcCCEEEEehhhcCCCcccc
Q 013204 223 PATYFEKVQAVVKKYDILFIADEVICAFGRLGT 255 (447)
Q Consensus 223 ~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~ 255 (447)
+++-++.+++-|+++||-||+|=|+.-|+..|.
T Consensus 212 tPedfk~fVD~aH~~GIgViLD~V~~HF~~d~~ 244 (628)
T COG0296 212 TPEDFKALVDAAHQAGIGVILDWVPNHFPPDGN 244 (628)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCcCCCCcc
Confidence 468899999999999999999999988876553
No 423
>PRK13600 putative ribosomal protein L7Ae-like; Provisional
Probab=27.06 E-value=1.3e+02 Score=22.16 Aligned_cols=29 Identities=14% Similarity=0.151 Sum_probs=23.1
Q ss_pred hhHHHHHHHHHHhcCCEEEEehhhcCCCc
Q 013204 224 ATYFEKVQAVVKKYDILFIADEVICAFGR 252 (447)
Q Consensus 224 ~~~l~~l~~l~~~~g~~li~DEv~~g~g~ 252 (447)
+.....|..+|++++++++.-+....+|+
T Consensus 41 ~~vv~~l~~lceek~Ip~v~V~s~~~LGk 69 (84)
T PRK13600 41 VYLMTRVLSQINQKNIPVSFFKSKHALGK 69 (84)
T ss_pred HHHHHHHHHHHHHcCCCEEEECCHHHHHH
Confidence 34688999999999999998777665544
No 424
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=27.04 E-value=3.2e+02 Score=22.11 Aligned_cols=56 Identities=21% Similarity=0.229 Sum_probs=32.3
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHH-HHhc-CCEEE-Eehhhc
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV-VKKY-DILFI-ADEVIC 248 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l-~~~~-g~~li-~DEv~~ 248 (447)
++.|.+++..... ..+|+=-|.+ +.|..-+.........+. .+++ ++.++ +||-+|
T Consensus 40 ~~~l~~li~~~~i--~~iVvGlP~~-~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 40 IEELKKLIEEYQI--DGIVVGLPLN-MDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp HHHHHHHHHHCCE--CEEEEEEEBB-CTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred HHHHHHHHHHhCC--CEEEEeCCcc-cCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 4778888876432 2344555544 444455555555555443 3444 88776 699877
No 425
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=26.62 E-value=1.4e+02 Score=26.57 Aligned_cols=38 Identities=13% Similarity=0.203 Sum_probs=29.5
Q ss_pred EEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEE-ehhh
Q 013204 205 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA-DEVI 247 (447)
Q Consensus 205 ~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~-DEv~ 247 (447)
.+++|+|-++.. |.... ++++.+++++||+.+|. +|+.
T Consensus 169 p~~vicEil~~d-G~ma~----~~~l~~fA~~h~l~~isi~dli 207 (218)
T PRK00910 169 PAGVLCELTNPD-GTMAK----TPEIIAFGKLHNMPVLTIEDMV 207 (218)
T ss_pred ceEEEEEEecCC-CCcCC----HHHHHHHHHHcCCcEEEHHHHH
Confidence 578899987755 45555 89999999999999984 5554
No 426
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=26.25 E-value=1.8e+02 Score=23.71 Aligned_cols=47 Identities=21% Similarity=0.403 Sum_probs=30.2
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhc-CCEEE
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY-DILFI 242 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~-g~~li 242 (447)
+++++++....+ ....+++.|..+ ..+..++-+.+.++|++| ++.++
T Consensus 67 ~nl~~ii~~~~~-~~~ivlv~~~~~----~~~~~~~n~~~~~~a~~~~~v~~i 114 (150)
T cd01840 67 DQLDELLDALGP-DRQVYLVNPHVP----RPWEPDVNAYLLDAAKKYKNVTII 114 (150)
T ss_pred HHHHHHHHHcCC-CCEEEEEECCCC----cchHHHHHHHHHHHHHHCCCcEEe
Confidence 677887776654 345666766421 223456667788999999 65544
No 427
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=26.21 E-value=1.3e+02 Score=22.02 Aligned_cols=38 Identities=5% Similarity=0.032 Sum_probs=26.5
Q ss_pred CcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhc
Q 013204 203 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 248 (447)
Q Consensus 203 ~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~ 248 (447)
....+|++-..- ++...+.+..+|+.|+++++......
T Consensus 23 gkakLViiA~Da--------~~~~~k~i~~~c~~~~Vpv~~~~t~~ 60 (82)
T PRK13601 23 CNVLQVYIAKDA--------EEHVTKKIKELCEEKSIKIVYIDTMK 60 (82)
T ss_pred CCeeEEEEeCCC--------CHHHHHHHHHHHHhCCCCEEEeCCHH
Confidence 455666664421 34668999999999999998665544
No 428
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=26.00 E-value=1.8e+02 Score=27.53 Aligned_cols=94 Identities=13% Similarity=0.288 Sum_probs=57.2
Q ss_pred HHHHHHHHhh-CCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccc-cccccccCCCCCCe
Q 013204 191 NNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG-TMFGCDKYSIKPDL 268 (447)
Q Consensus 191 ~~le~~l~~~-~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g-~~~~~~~~~~~~d~ 268 (447)
+++++.+... ..+++++|++ -+++.||.......-.++|.++.++.-++++++.+-. .| +.. ....|-
T Consensus 83 ~~~~~~l~~~~~~~~vk~vvL-~inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AA----SGGY~I-----A~aAd~ 152 (317)
T COG0616 83 DDIEEILRAARADPSVKAVVL-RINSPGGSVVASELIARALKRLRAKKPVVVSVGGYAA----SGGYYI-----ALAADK 152 (317)
T ss_pred HHHHHHHHHHhcCCCCceEEE-EEECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeec----chhhhh-----hccCCE
Confidence 4444444332 1234544443 3567788888877777888888877656777775533 22 111 234677
Q ss_pred eeecc-cCCCcccceeEEEeChhHHHHhhh
Q 013204 269 VSFAK-ALSSAYMPIGAILVSPEVSEVIHS 297 (447)
Q Consensus 269 v~~sK-~l~gg~~~~g~~~~~~~~~~~~~~ 297 (447)
+..++ ++.| ++|++...+.+.+.+.+
T Consensus 153 I~a~p~si~G---SIGVi~~~~~~~~l~~k 179 (317)
T COG0616 153 IVADPSSITG---SIGVISGAPNFEELLEK 179 (317)
T ss_pred EEecCCceee---eceeEEecCCHHHHHHh
Confidence 77776 5665 67888888887777664
No 429
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair]
Probab=25.95 E-value=4.2e+02 Score=22.93 Aligned_cols=16 Identities=31% Similarity=0.553 Sum_probs=13.2
Q ss_pred eCCCCEEEecCCcccc
Q 013204 29 DVNGKKYLDSLAGLWC 44 (447)
Q Consensus 29 d~dg~~~lD~~~~~~~ 44 (447)
..+|..+||+.+|.|+
T Consensus 41 ~i~g~~~LDlFAGSGa 56 (187)
T COG0742 41 EIEGARVLDLFAGSGA 56 (187)
T ss_pred ccCCCEEEEecCCccH
Confidence 3789999999988764
No 430
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=25.86 E-value=2.2e+02 Score=19.48 Aligned_cols=44 Identities=20% Similarity=0.169 Sum_probs=33.3
Q ss_pred HHHHHHHHHHcCceEE--eeC-CEEEEecCCCCCHHHHHHHHHHHHHHH
Q 013204 388 GAYFGAQCEKHGMLVR--VSG-DNIMMSPPFIMSPEEVDELISKYGKAL 433 (447)
Q Consensus 388 ~~~~~~~l~~~Gi~~~--~~g-~~iR~~~~~~~t~e~i~~~~~~l~~~l 433 (447)
...+.+.|.+.|+-+. .-+ +.++++ +..++++.++++++|.+.+
T Consensus 18 ~~ki~~~L~~~~I~v~~i~~~~s~~~is--~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 18 LARGLAALAEAGIEPIAAHQSMRNVDVQ--FVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHHCCCCEEEEEecCCeeEEE--EEEEHHHHHHHHHHHHHHH
Confidence 4567778888898873 223 347887 7789999999999998765
No 431
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=25.48 E-value=1.8e+02 Score=24.43 Aligned_cols=52 Identities=17% Similarity=0.245 Sum_probs=27.2
Q ss_pred HHHHHHHHhh--CCCcEEEEEEccccCCCCCc---------cCChhHHHHHHHHHHhcCCEEE
Q 013204 191 NNLEDLILKE--GPETIAAFIAEPVIGAGGVI---------PPPATYFEKVQAVVKKYDILFI 242 (447)
Q Consensus 191 ~~le~~l~~~--~~~~~a~vi~epv~~~~G~~---------~~~~~~l~~l~~l~~~~g~~li 242 (447)
+.+++++... .......|++.|........ ..-..+-+.+.++|+++++.+|
T Consensus 89 ~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~i 151 (191)
T cd01834 89 TNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPLPDGAEYNANLAAYADAVRELAAENGVAFV 151 (191)
T ss_pred HHHHHHHHHHHcccCCCcEEEECCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 4455554433 22344567777654332111 0012344557788999998777
No 432
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=24.96 E-value=1.5e+02 Score=26.52 Aligned_cols=39 Identities=15% Similarity=0.181 Sum_probs=29.9
Q ss_pred EEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEE-Eehhhc
Q 013204 205 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI-ADEVIC 248 (447)
Q Consensus 205 ~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li-~DEv~~ 248 (447)
.+++++|-++.. |.... .+++.+++++||+.+| ++|+..
T Consensus 173 P~~vicEil~~d-G~ma~----~~~l~~fA~~~~l~iisi~dli~ 212 (230)
T PRK00014 173 PAGVLCELMNAD-GTMMR----GASLERYAAKEGLVALAIDELAA 212 (230)
T ss_pred ceEEEEEEeCCC-CCccC----HHHHHHHHHHcCCcEEEHHHHHH
Confidence 578888887655 44554 8999999999999998 466543
No 433
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=24.45 E-value=1.5e+02 Score=23.14 Aligned_cols=44 Identities=18% Similarity=0.324 Sum_probs=31.1
Q ss_pred HHHHHHHHHHcCceEEe----eC-----CE-EEEecCCCCCHHHHHHHHHHHHHHHHH
Q 013204 388 GAYFGAQCEKHGMLVRV----SG-----DN-IMMSPPFIMSPEEVDELISKYGKALKA 435 (447)
Q Consensus 388 ~~~~~~~l~~~Gi~~~~----~g-----~~-iR~~~~~~~t~e~i~~~~~~l~~~l~~ 435 (447)
+..+.+.|.++|+.++- +| +. +-+ ..++++++++++.+++.+++
T Consensus 13 a~~l~~~L~~~g~~~TkLsstGGFLr~GNtTlli----Gvede~v~~vl~iIk~~c~~ 66 (109)
T PF06153_consen 13 ADDLSDALNENGFRVTKLSSTGGFLREGNTTLLI----GVEDEKVDEVLEIIKENCKK 66 (109)
T ss_dssp HHHHHHHHHHTT--EEEEEEEETTTTEEEEEEEE----EEEGGGHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHCCceEEEEecccceeccCCEEEEE----EecHHHHHHHHHHHHHhhcC
Confidence 56788999999998763 22 32 444 48999999999999998865
No 434
>KOG0352 consensus ATP-dependent DNA helicase [Replication, recombination and repair]
Probab=24.31 E-value=1.7e+02 Score=28.85 Aligned_cols=57 Identities=16% Similarity=0.401 Sum_probs=36.9
Q ss_pred CcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCC-EEEEehhhcCCCccccccccccCCCCCCeeeecc
Q 013204 203 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI-LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAK 273 (447)
Q Consensus 203 ~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~-~li~DEv~~g~g~~g~~~~~~~~~~~~d~v~~sK 273 (447)
.+++.+-+.|-+. .+..|..-|..|..++-. ++++||+|+ ... |.+ +..||.+.+|.
T Consensus 112 p~~K~LYITPE~A------At~~FQ~lLn~L~~r~~L~Y~vVDEAHC-VSQ----WGH---DFRPDYL~LG~ 169 (641)
T KOG0352|consen 112 PTIKMLYITPEGA------ATDGFQKLLNGLANRDVLRYIVVDEAHC-VSQ----WGH---DFRPDYLTLGS 169 (641)
T ss_pred CceeEEEEchhhh------hhhhHHHHHHHHhhhceeeeEEechhhh-Hhh----hcc---ccCcchhhhhh
Confidence 3677888888653 344556666667666543 778999998 211 111 35799998874
No 435
>smart00839 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase. Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction.
Probab=24.12 E-value=3.3e+02 Score=20.78 Aligned_cols=48 Identities=25% Similarity=0.219 Sum_probs=28.1
Q ss_pred HHHHHHHcCceEEee-----CCEEEEec----CCCCCHHHHH-HHHHHHHHHHHHHHH
Q 013204 391 FGAQCEKHGMLVRVS-----GDNIMMSP----PFIMSPEEVD-ELISKYGKALKATEE 438 (447)
Q Consensus 391 ~~~~l~~~Gi~~~~~-----g~~iR~~~----~~~~t~e~i~-~~~~~l~~~l~~~~~ 438 (447)
-.+.|.++||++.|. |+.+.... ....+++++. +..+++.+.+.++.+
T Consensus 40 a~~~L~~rGi~~~PD~~~NaGGvi~s~~E~~~~~~~~~e~v~~~~~~~i~~~~~~v~~ 97 (102)
T smart00839 40 ADDILEDRGVLYAPDFAANAGGVIVSALEMLQNLARTAEEVFTDLSEIMRNALEEIFE 97 (102)
T ss_pred HHHHHHHCCCEEcCcceecCCCEEeehhhhhcccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 457789999999875 33322221 1112555555 677777776666543
No 436
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=23.80 E-value=1.9e+02 Score=25.82 Aligned_cols=40 Identities=10% Similarity=0.084 Sum_probs=26.9
Q ss_pred cEEEEEEccccCCC-CCccCC-----hhHHHHHHHHHHhcCCEEEE
Q 013204 204 TIAAFIAEPVIGAG-GVIPPP-----ATYFEKVQAVVKKYDILFIA 243 (447)
Q Consensus 204 ~~a~vi~epv~~~~-G~~~~~-----~~~l~~l~~l~~~~g~~li~ 243 (447)
.+..|++++.+..- +..... ..++..|.++|+++|+.+++
T Consensus 123 ~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 123 GLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 56789999986432 110111 14678899999999997775
No 437
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=23.78 E-value=1.6e+02 Score=26.01 Aligned_cols=38 Identities=16% Similarity=0.286 Sum_probs=28.6
Q ss_pred cEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEE-ehh
Q 013204 204 TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA-DEV 246 (447)
Q Consensus 204 ~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~-DEv 246 (447)
..+++++|-++-. |.... .+++.+++++||+.+|. +|+
T Consensus 167 ~p~~vicEil~~d-G~ma~----~~~~~~fA~~~~l~~isi~dl 205 (214)
T PRK01792 167 KEAGVICEITNDD-GTMAR----TPEIVEFAKKFGYAVVTIEDL 205 (214)
T ss_pred CceEEEEEEecCC-CCccC----HHHHHHHHHHcCCcEEEHHHH
Confidence 3478888887644 45555 88999999999999984 444
No 438
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=23.62 E-value=2.3e+02 Score=25.90 Aligned_cols=51 Identities=22% Similarity=0.285 Sum_probs=37.2
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCC--ccCChhHHHHHHHHHHhcCCEEE
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGV--IPPPATYFEKVQAVVKKYDILFI 242 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~--~~~~~~~l~~l~~l~~~~g~~li 242 (447)
+.|.+.+.. .+...-.+|++|.+|.|.. ..|...+...|.+|-+.-|+.+|
T Consensus 19 ~~l~~a~~~-~p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vl 71 (253)
T PF12138_consen 19 DPLYDAIAA-HPSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVL 71 (253)
T ss_pred HHHHHHHhc-CCCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEE
Confidence 445454544 3445568999999998833 44888999999999877787776
No 439
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=23.58 E-value=2.9e+02 Score=28.23 Aligned_cols=44 Identities=18% Similarity=0.185 Sum_probs=25.1
Q ss_pred EEEEccccCCCCCccCC-hhHHHHHHHHHHhcCCEEEEehhhcCC
Q 013204 207 AFIAEPVIGAGGVIPPP-ATYFEKVQAVVKKYDILFIADEVICAF 250 (447)
Q Consensus 207 ~vi~epv~~~~G~~~~~-~~~l~~l~~l~~~~g~~li~DEv~~g~ 250 (447)
+||.+-..-.+|++.+. .+--.+..++|..++++|++=.=..||
T Consensus 327 GiIANqp~~~~G~l~~~sa~KaArFI~~cd~~~iPlv~L~d~pGF 371 (526)
T COG4799 327 GIIANQPRHLGGVLDIDSADKAARFIRLCDAFNIPLVFLVDTPGF 371 (526)
T ss_pred EEEecCccccccccchHHHHHHHHHHHhhhccCCCeEEEeCCCCC
Confidence 44444333345555432 244556779999999988752223455
No 440
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=23.51 E-value=1.1e+02 Score=28.03 Aligned_cols=46 Identities=20% Similarity=0.361 Sum_probs=33.7
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEe
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 244 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~D 244 (447)
+.+++++. ++-++++-|-.+....+ ...++.|.++|++.++++++|
T Consensus 93 ~~i~k~L~-----RlhavVIGPGLGRdp~~---~k~i~~iley~~~~dvP~VID 138 (306)
T KOG3974|consen 93 DIIEKLLQ-----RLHAVVIGPGLGRDPAI---LKEIAKILEYLRGKDVPLVID 138 (306)
T ss_pred hHHHHHHh-----heeEEEECCCCCCCHHH---HHHHHHHHHHHhcCCCcEEEc
Confidence 56667664 45578887776654322 345788999999999999999
No 441
>COG3286 Uncharacterized protein conserved in archaea [Function unknown]
Probab=23.51 E-value=4.9e+02 Score=22.59 Aligned_cols=50 Identities=16% Similarity=0.121 Sum_probs=39.1
Q ss_pred HHHHHHHHHcCceEEeeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 013204 389 AYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKE 442 (447)
Q Consensus 389 ~~~~~~l~~~Gi~~~~~g~~iR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~ 442 (447)
..+...|.-.|.-+...++.|.- +.+-+++-+++..|.+...+.+.+..+
T Consensus 92 ~vl~daLk~~GyrVevr~~~l~T----~ap~~ev~E~vreLse~~~E~~~~~lt 141 (204)
T COG3286 92 DVLIDALKLLGYRVEVRGGELKT----NAPWSEVVELVRELSEVYREARFQPLT 141 (204)
T ss_pred HHHHHHHHhCCceEEeeCceeec----CCCHHHHHHHHHHHHHHHHHHHhcccc
Confidence 34778888889888777777444 477899999999999999988766554
No 442
>TIGR01149 mtrG N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit G. coenzyme M methyltransferase subunit G in methanogenic archaea. This methyltranfersae is membrane-associated enzyme complex that uses methyl-transfer reaction to drive sodium-ion pump. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase is involved in the transfer of 'methyl' group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of the methyl moiety in methyl-coenzyme M by another enzyme methyl-coenzyme M reductase.
Probab=23.50 E-value=1.7e+02 Score=20.51 Aligned_cols=30 Identities=20% Similarity=0.381 Sum_probs=22.1
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 013204 413 PPFIMSPEEVDELISKYGKALKATEERVKE 442 (447)
Q Consensus 413 ~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~ 442 (447)
|....++.|..++.++|++.=++++.-..+
T Consensus 5 P~v~v~~~d~~~i~~rLd~iEeKVEf~~~E 34 (70)
T TIGR01149 5 PAVFVEPDEFNEVMKRLDEIEEKVEFVNGE 34 (70)
T ss_pred CeeecCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445678899999999998877766644444
No 443
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=23.42 E-value=3.8e+02 Score=24.51 Aligned_cols=40 Identities=13% Similarity=0.280 Sum_probs=23.3
Q ss_pred HHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEE
Q 013204 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 242 (447)
Q Consensus 192 ~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li 242 (447)
++.++....+...+.+|++|+..+. +.+..++++.|+.++
T Consensus 205 ~l~~l~~~ik~~~v~~if~e~~~~~-----------~~~~~la~~~g~~v~ 244 (266)
T cd01018 205 DLKRLIDLAKEKGVRVVFVQPQFST-----------KSAEAIAREIGAKVV 244 (266)
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCc-----------HHHHHHHHHcCCeEE
Confidence 3333333333456788888885432 234467778887665
No 444
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=23.34 E-value=6.4e+02 Score=23.81 Aligned_cols=44 Identities=14% Similarity=0.104 Sum_probs=30.1
Q ss_pred EEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCcc
Q 013204 208 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 253 (447)
Q Consensus 208 vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~ 253 (447)
+....-+.-+|.-.|.++.++.+..+++..|+ +.|=||+|-...
T Consensus 245 v~~~~dy~~~~Yg~p~~e~~e~i~~~~~~eGi--llDpVYtgKam~ 288 (323)
T COG2515 245 VLLSDDYHHPGYGKPNEEDIEAIKLLARLEGI--LLDPVYTGKAMY 288 (323)
T ss_pred EEEEecccCCccCCcCHHHHHHHHHHHHhhCc--ccccccchHHHH
Confidence 33334444444456788999999999999987 569888864333
No 445
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=22.77 E-value=2.9e+02 Score=20.10 Aligned_cols=45 Identities=9% Similarity=0.109 Sum_probs=28.4
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehh
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 246 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv 246 (447)
+...+.+.+ ++..+|++-..- ++...+.+..+|++++++++.-..
T Consensus 17 ~~v~kai~~---gkaklViiA~D~--------~~~~~~~i~~~c~~~~Vp~~~~~s 61 (82)
T PRK13602 17 KQTVKALKR---GSVKEVVVAEDA--------DPRLTEKVEALANEKGVPVSKVDS 61 (82)
T ss_pred HHHHHHHHc---CCeeEEEEECCC--------CHHHHHHHHHHHHHcCCCEEEECC
Confidence 344444542 455566654321 234688999999999999875443
No 446
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=22.61 E-value=2.6e+02 Score=24.58 Aligned_cols=44 Identities=9% Similarity=0.145 Sum_probs=27.8
Q ss_pred CcEEEEEEccccCCCCCc-cC----------ChhHHHHHHHHHHhcCCEEEE-ehh
Q 013204 203 ETIAAFIAEPVIGAGGVI-PP----------PATYFEKVQAVVKKYDILFIA-DEV 246 (447)
Q Consensus 203 ~~~a~vi~epv~~~~G~~-~~----------~~~~l~~l~~l~~~~g~~li~-DEv 246 (447)
..+.+|++|++..--... .. -..++..|..+|+++++.+++ .++
T Consensus 113 ~~~~lvVIDsis~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~tnq~ 168 (226)
T cd01393 113 GRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVFTNQV 168 (226)
T ss_pred CCeeEEEEcCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEEE
Confidence 467899999985421100 00 123556789999999997764 444
No 447
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=22.43 E-value=5.2e+02 Score=22.49 Aligned_cols=17 Identities=18% Similarity=0.200 Sum_probs=15.3
Q ss_pred HHHHHHHHHhcCCEEEE
Q 013204 227 FEKVQAVVKKYDILFIA 243 (447)
Q Consensus 227 l~~l~~l~~~~g~~li~ 243 (447)
+.++.+.+|++|+.+|.
T Consensus 125 v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 125 IVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHHHHHHHHCCCEEEE
Confidence 88899999999999883
No 448
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=22.31 E-value=73 Score=29.50 Aligned_cols=25 Identities=24% Similarity=0.198 Sum_probs=22.3
Q ss_pred hhHHHHHHHHHHhcCCEEEEehhhc
Q 013204 224 ATYFEKVQAVVKKYDILFIADEVIC 248 (447)
Q Consensus 224 ~~~l~~l~~l~~~~g~~li~DEv~~ 248 (447)
.+.++++++.|+++|+.||+|=|..
T Consensus 51 ~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 51 MEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred hhhhhhhhhccccccceEEEeeecc
Confidence 4679999999999999999998854
No 449
>PRK01026 tetrahydromethanopterin S-methyltransferase subunit G; Provisional
Probab=22.29 E-value=2e+02 Score=20.70 Aligned_cols=30 Identities=17% Similarity=0.347 Sum_probs=22.5
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 013204 413 PPFIMSPEEVDELISKYGKALKATEERVKE 442 (447)
Q Consensus 413 ~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~ 442 (447)
|....+++|..++.++|++.=++++.-..+
T Consensus 8 P~viv~~~d~~~i~~rLD~iEeKVEftn~E 37 (77)
T PRK01026 8 PQVVVDPKDFKEIQKRLDEIEEKVEFTNAE 37 (77)
T ss_pred CeeecCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455678999999999998887766644444
No 450
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=22.26 E-value=2.6e+02 Score=21.23 Aligned_cols=54 Identities=13% Similarity=0.053 Sum_probs=28.2
Q ss_pred HHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcce-EEEEcCCCccch
Q 013204 80 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK-FIARQKSYHGST 141 (447)
Q Consensus 80 ~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~-vi~~~~~yhg~~ 141 (447)
.++.+.+..+....+..=+++|.+|..+..++..+.. .|-++ +..+++++.+|.
T Consensus 52 ~~l~~~~~~l~~~~~~~ivv~C~~G~rs~~a~~~L~~--------~G~~~~v~~l~gG~~~W~ 106 (109)
T cd01533 52 AELVLRVGELAPDPRTPIVVNCAGRTRSIIGAQSLIN--------AGLPNPVAALRNGTQGWT 106 (109)
T ss_pred HHHHHHHHhcCCCCCCeEEEECCCCchHHHHHHHHHH--------CCCCcceeEecCCHHHHH
Confidence 3454444444211233457777788877554433321 23333 677788776653
No 451
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=21.97 E-value=5.2e+02 Score=24.03 Aligned_cols=58 Identities=16% Similarity=0.097 Sum_probs=34.5
Q ss_pred cCCChHHHHHHHHHHHhcCcCCCCeEEEeCChhhHHHHHHHHHHHHHHhcCCCCcceEEEEcCCC
Q 013204 73 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSY 137 (447)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~~v~~~~sGseA~~~Al~~~~~~~~~~~~~~~~~vi~~~~~y 137 (447)
..+.+...++.+...+... +.-.++ ...|+.....++++++.+... |-+.+++..|.|
T Consensus 53 ~Ls~eEr~~~~~~~~~~~~--~~~~vi-agvg~~~t~~ai~~a~~a~~~----Gad~v~v~~P~y 110 (293)
T PRK04147 53 LLSTEEKKQVLEIVAEEAK--GKVKLI-AQVGSVNTAEAQELAKYATEL----GYDAISAVTPFY 110 (293)
T ss_pred cCCHHHHHHHHHHHHHHhC--CCCCEE-ecCCCCCHHHHHHHHHHHHHc----CCCEEEEeCCcC
Confidence 3455666677777776642 222344 455666777788877655332 346677776666
No 452
>PRK06683 hypothetical protein; Provisional
Probab=21.82 E-value=1.8e+02 Score=21.25 Aligned_cols=40 Identities=5% Similarity=-0.011 Sum_probs=26.8
Q ss_pred CcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCC
Q 013204 203 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250 (447)
Q Consensus 203 ~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~ 250 (447)
+....|++-..- ++...+.+..+|+.|+++++.-+....+
T Consensus 26 gkaklViiA~Da--------~~~~~~~i~~~~~~~~Vpv~~~~t~~eL 65 (82)
T PRK06683 26 GIVKEVVIAEDA--------DMRLTHVIIRTALQHNIPITKVESVRKL 65 (82)
T ss_pred CCeeEEEEECCC--------CHHHHHHHHHHHHhcCCCEEEECCHHHH
Confidence 456666664322 3346888999999999999866544333
No 453
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=21.55 E-value=1.9e+02 Score=29.88 Aligned_cols=45 Identities=20% Similarity=0.171 Sum_probs=32.3
Q ss_pred cEEEEEEccccCCC----CCc----------cCChhHHHHHHHHHHhcCCEEEEehhhc
Q 013204 204 TIAAFIAEPVIGAG----GVI----------PPPATYFEKVQAVVKKYDILFIADEVIC 248 (447)
Q Consensus 204 ~~a~vi~epv~~~~----G~~----------~~~~~~l~~l~~l~~~~g~~li~DEv~~ 248 (447)
.+-+|.+.|+.... |.- .-+.+.++++++-|+++|+-+|+|=|..
T Consensus 40 G~~~i~l~Pi~~~~~~~~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~v~N 98 (543)
T TIGR02403 40 GVDYIWLNPFYVSPQKDNGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDMVFN 98 (543)
T ss_pred CCCEEEECCcccCCCCCCCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 35678888885432 210 1134679999999999999999997754
No 454
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=21.16 E-value=2.1e+02 Score=29.69 Aligned_cols=80 Identities=18% Similarity=0.326 Sum_probs=47.8
Q ss_pred HHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCC--CCCCeeeec-
Q 013204 196 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS--IKPDLVSFA- 272 (447)
Q Consensus 196 ~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~--~~~d~v~~s- 272 (447)
.+.......+.++.+.|-. ..++.|++.|. +-.=.++++||+|+ + ..|| ..||+.-++
T Consensus 99 v~~~l~~g~~klLyisPEr------l~~~~f~~~L~---~~~i~l~vIDEAHC-i---------SqWGhdFRP~Y~~lg~ 159 (590)
T COG0514 99 VLNQLKSGQLKLLYISPER------LMSPRFLELLK---RLPISLVAIDEAHC-I---------SQWGHDFRPDYRRLGR 159 (590)
T ss_pred HHHHHhcCceeEEEECchh------hcChHHHHHHH---hCCCceEEechHHH-H---------hhcCCccCHhHHHHHH
Confidence 3333334678899998863 33446666666 44457899999998 3 3333 467776554
Q ss_pred --ccCCCcccceeEEE--eChhHHHHhh
Q 013204 273 --KALSSAYMPIGAIL--VSPEVSEVIH 296 (447)
Q Consensus 273 --K~l~gg~~~~g~~~--~~~~~~~~~~ 296 (447)
+.+.. .|+-++. +++.+.+.+.
T Consensus 160 l~~~~~~--~p~~AlTATA~~~v~~DI~ 185 (590)
T COG0514 160 LRAGLPN--PPVLALTATATPRVRDDIR 185 (590)
T ss_pred HHhhCCC--CCEEEEeCCCChHHHHHHH
Confidence 35554 5666663 3445544443
No 455
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=20.97 E-value=3.5e+02 Score=25.34 Aligned_cols=52 Identities=12% Similarity=0.132 Sum_probs=37.5
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCC
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~ 250 (447)
.+++++.+.+ .....+.+.|.... ..+.+..+..+.+.|+++|+++++ |+|.
T Consensus 115 ~~E~er~v~~---~gf~g~~l~p~~~~---~~~~~~~~~pi~~~a~~~gvpv~i---htG~ 166 (293)
T COG2159 115 AEELERRVRE---LGFVGVKLHPVAQG---FYPDDPRLYPIYEAAEELGVPVVI---HTGA 166 (293)
T ss_pred HHHHHHHHHh---cCceEEEecccccC---CCCCChHHHHHHHHHHHcCCCEEE---EeCC
Confidence 3677777764 34667888776433 344555589999999999999998 5655
No 456
>cd01125 repA Hexameric Replicative Helicase RepA. RepA is encoded by a plasmid, which is found in most Gram negative bacteria. RepA is a 5'-3' DNA helicase which can utilize ATP, GTP and CTP to a lesser extent.
Probab=20.91 E-value=2.2e+02 Score=25.54 Aligned_cols=40 Identities=10% Similarity=0.243 Sum_probs=25.6
Q ss_pred cEEEEEEccccCCCCCcc----CChhHHHHHHHHHHhcCCEEEE
Q 013204 204 TIAAFIAEPVIGAGGVIP----PPATYFEKVQAVVKKYDILFIA 243 (447)
Q Consensus 204 ~~a~vi~epv~~~~G~~~----~~~~~l~~l~~l~~~~g~~li~ 243 (447)
.+.+|++||...-.+... .-..+++.+.++++++|+.+++
T Consensus 111 ~~~lvviDpl~~~~~~~~~d~~~~~~~~~~L~~~a~~~g~avl~ 154 (239)
T cd01125 111 RIDLVVIDPLVSFHGVSENDNGAMDAVIKALRRIAAQTGAAILL 154 (239)
T ss_pred CCCEEEECChHHhCCCCcCCHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 457899998754321111 1124678888899988876664
No 457
>cd07571 ALP_N-acyl_transferase Apolipoprotein N-acyl transferase (class 9 nitrilases). ALP N-acyl transferase (Lnt), is an essential membrane-bound enzyme in gram-negative bacteria, which catalyzes the N-acylation of apolipoproteins, the final step in lipoprotein maturation. This is a reverse amidase (i.e. condensation) reaction. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 9.
Probab=20.81 E-value=3.6e+02 Score=24.71 Aligned_cols=37 Identities=3% Similarity=0.038 Sum_probs=25.8
Q ss_pred EEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEE
Q 013204 207 AFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 243 (447)
Q Consensus 207 ~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~ 243 (447)
-+++=|-....|.......+++++.++|+++++.+|+
T Consensus 41 ~lvvfPE~~l~g~~~~~~~~~~~l~~~ak~~~i~ii~ 77 (270)
T cd07571 41 DLVVWPETALPFDLQRDPDALARLARAARAVGAPLLT 77 (270)
T ss_pred CEEEecCCcCCcccccCHHHHHHHHHHHHhcCCeEEE
Confidence 3455555444444334557899999999999998874
No 458
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=20.81 E-value=2.6e+02 Score=23.57 Aligned_cols=64 Identities=16% Similarity=0.184 Sum_probs=40.0
Q ss_pred EEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEEehhhcCCCccccccccccCCCCCCee-eec
Q 013204 206 AAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV-SFA 272 (447)
Q Consensus 206 a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~DEv~~g~g~~g~~~~~~~~~~~~d~v-~~s 272 (447)
.-+|+|.+.+.|- .-+.++.+.++.+.+.+++.+++.=++-||+-.. .+.....-+.+|.+ +|+
T Consensus 100 ~dlIIDal~G~G~-~~~l~~~~~~~i~~iN~~~~~viAiDiPSGl~~d--tG~~~~~~v~Ad~Tvt~g 164 (169)
T PF03853_consen 100 ADLIIDALFGTGF-SGPLRGPIAELIDWINASRAPVIAIDIPSGLDAD--TGEVDGPAVRADYTVTFG 164 (169)
T ss_dssp ESEEEEES-STTG-GSCGSTCHHHHHHHHHHHCSEEEEESS-TTCBTT--TB-BSSSS---SEEEEES
T ss_pred ccEEEEecccCCC-CCCcCHHHHHHHHHHhccCCcEEEecCCCCccCC--CCCcCCCEEEcceeeecC
Confidence 5689999999974 3444556899999999999999988888887221 22222233667754 454
No 459
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=20.52 E-value=2.6e+02 Score=24.89 Aligned_cols=40 Identities=18% Similarity=0.243 Sum_probs=28.5
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhcCCEEEE
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 243 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~~li~ 243 (447)
+.+++++. ..+.+||+.|..+.. +..+.+-|++.|+++|+
T Consensus 46 ~~i~~~i~----~~~d~Iiv~~~~~~~---------~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 46 EQIEQAIS----QGVDGIIVSPVDPDS---------LAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHH----TTESEEEEESSSTTT---------THHHHHHHHHTTSEEEE
T ss_pred HHHHHHHH----hcCCEEEecCCCHHH---------HHHHHHHHhhcCceEEE
Confidence 55666665 347789998876643 34556668889999886
No 460
>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .
Probab=20.24 E-value=2e+02 Score=25.56 Aligned_cols=56 Identities=13% Similarity=0.302 Sum_probs=33.1
Q ss_pred HHHHHHHHhhCCCcEEEEEEccccCCCC-CccCC----------hhHHHHHHHHHHhcCCEEEE-ehhhc
Q 013204 191 NNLEDLILKEGPETIAAFIAEPVIGAGG-VIPPP----------ATYFEKVQAVVKKYDILFIA-DEVIC 248 (447)
Q Consensus 191 ~~le~~l~~~~~~~~a~vi~epv~~~~G-~~~~~----------~~~l~~l~~l~~~~g~~li~-DEv~~ 248 (447)
+.+++.+... ..+..|++|++..--. ..... ..++..|..+|++|++.+++ .++..
T Consensus 104 ~~l~~~l~~~--~~~~liVIDSis~~~~~~~~~~~~~~~r~~~l~~~~~~L~~la~~~~~avl~tn~~~~ 171 (235)
T cd01123 104 EELEAILIES--SRIKLVIVDSVTALFRAEFDGRGELAERQQHLAKLLRTLKRLADEFNVAVVITNQVTA 171 (235)
T ss_pred HHHHHHHhhc--CCeeEEEEeCcHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHhCCEEEEeccEee
Confidence 4444444431 2688999999864210 01111 24577788899999987664 54443
No 461
>PF13113 DUF3970: Protein of unknown function (DUF3970)
Probab=20.20 E-value=1.3e+02 Score=20.35 Aligned_cols=19 Identities=32% Similarity=0.599 Sum_probs=15.5
Q ss_pred EEEecCCCCCHHHHHHHHHHHHH
Q 013204 409 IMMSPPFIMSPEEVDELISKYGK 431 (447)
Q Consensus 409 iR~~~~~~~t~e~i~~~~~~l~~ 431 (447)
||++ .++|||.++++.|.+
T Consensus 4 VRl~----G~~eEi~~fi~~~~~ 22 (60)
T PF13113_consen 4 VRLS----GTKEEIEEFIKSFEK 22 (60)
T ss_pred EEec----CCHHHHHHHHHhhhh
Confidence 4555 788999999998877
No 462
>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane]
Probab=20.16 E-value=3.6e+02 Score=24.23 Aligned_cols=45 Identities=24% Similarity=0.300 Sum_probs=33.4
Q ss_pred HHHHHHHHHhhCCCcEEEEEEccccCCCCCccCChhHHHHHHHHHHhc
Q 013204 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY 237 (447)
Q Consensus 190 ~~~le~~l~~~~~~~~a~vi~epv~~~~G~~~~~~~~l~~l~~l~~~~ 237 (447)
.+.||++..-....++.+.+++.+.+.| +.+++.|++.++++.+.
T Consensus 201 ~E~LEQLR~Le~G~kI~v~i~~~~p~~g---VDT~EDLe~v~~~~~~~ 245 (247)
T COG1212 201 IESLEQLRVLENGEKIHVEIVKEVPSIG---VDTPEDLERVRKILSNN 245 (247)
T ss_pred HHHHHHHHHHHcCCeeEEEEeccCCCCC---CCCHHHHHHHHHHHHhh
Confidence 4677777555556678888888777665 55778899999988754
Done!