RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 013204
(447 letters)
>gnl|CDD|215405 PLN02760, PLN02760, 4-aminobutyrate:pyruvate transaminase.
Length = 504
Score = 978 bits (2530), Expect = 0.0
Identities = 401/447 (89%), Positives = 428/447 (95%)
Query: 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATA 60
MLAPFTAGWQSTD+ PLVIEKSEGSYVYD+NGKKYLD+LAGLWCTALGGSEPRLVAAAT
Sbjct: 57 MLAPFTAGWQSTDLEPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATE 116
Query: 61 QLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN 120
QLN LPFYHSFWNRTTKPSLDLAKELLEMFTA KM KVFFTNSGSEANDTQVKLVWYYNN
Sbjct: 117 QLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNN 176
Query: 121 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGE 180
ALGRPNKKKFIAR KSYHGSTLI+ASLSGLPALHQKFDLPAPFVLHTDCPHYWR+ PGE
Sbjct: 177 ALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGE 236
Query: 181 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 240
TEEE+STRLA+NLE+LILKEGPETIAAFIAEPV+GAGGVIPPPATYFEK+QAV+KKYDIL
Sbjct: 237 TEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDIL 296
Query: 241 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 300
FIADEVICAFGRLGTMFGCDKY+IKPDLVS AKALSSAYMPIGA+LVSPE+S+VIHSQSN
Sbjct: 297 FIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSN 356
Query: 301 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI 360
LGSF+HGFTYSGHPVSCAVA+EALKIYKERNI E VNKIAP+FQDG+KAFS SPIIGEI
Sbjct: 357 KLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIGEI 416
Query: 361 RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPE 420
RGTGLILGTEF DNKSPN+PFP EWG+GAYFGA+C+K GMLVRV+GDNIMMSPP I++PE
Sbjct: 417 RGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAGDNIMMSPPLIITPE 476
Query: 421 EVDELISKYGKALKATEERVKELKSQQ 447
EVDELIS YGKALKATEERV ELKSQ+
Sbjct: 477 EVDELISIYGKALKATEERVAELKSQK 503
>gnl|CDD|180401 PRK06105, PRK06105, aminotransferase; Provisional.
Length = 460
Score = 656 bits (1694), Expect = 0.0
Identities = 232/441 (52%), Positives = 312/441 (70%), Gaps = 1/441 (0%)
Query: 2 LAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ 61
L P+T + + PLVIE+ EG YVYD GK+Y++ +AGLW ALG SE RLV AA Q
Sbjct: 17 LHPYTNARRHEEEGPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQ 76
Query: 62 LNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA 121
+ LPFYH+F +++ P +DLA++L+ M M+KVFFTNSGSEANDT VKLVWYYNNA
Sbjct: 77 MKKLPFYHTFSHKSHGPVIDLAEKLVAM-APVPMSKVFFTNSGSEANDTVVKLVWYYNNA 135
Query: 122 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 181
LGRP KKK I+RQ+ YHG T+ +ASL+GLP H+ FDLP +LHT CPHY+R+ PGE+
Sbjct: 136 LGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGES 195
Query: 182 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILF 241
EE ++TRLAN LE LIL EGP+TIAAFI EPV+GAGGVI PP TY+EK+QAV++KYDIL
Sbjct: 196 EEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILL 255
Query: 242 IADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT 301
+ADEVIC FGR G MFGC+ + IKPD++ +K LSS+Y P+ A+L++ +V + I +S
Sbjct: 256 VADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGK 315
Query: 302 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR 361
+G+F HGFT SGHPV+ AVA+E L I +ER++V + + Q ++A +D P++GE+R
Sbjct: 316 IGTFGHGFTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRALADHPLVGEVR 375
Query: 362 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEE 421
G GLI E +K+ PF P +GA A +HG++ R GD + PP I++ +
Sbjct: 376 GVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMGDTLAFCPPLIITAAQ 435
Query: 422 VDELISKYGKALKATEERVKE 442
VDE++ ++G+AL V
Sbjct: 436 VDEMVDRFGRALDDVAAWVAA 456
>gnl|CDD|223239 COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoate
aminotransferase [Coenzyme metabolism].
Length = 449
Score = 531 bits (1370), Expect = 0.0
Identities = 183/443 (41%), Positives = 264/443 (59%), Gaps = 14/443 (3%)
Query: 4 PFTAGWQSTD--VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ 61
PFT Q D P VI ++EG Y+ D++G++YLD ++GLWC G P + A Q
Sbjct: 16 PFT---QMRDPLAEPRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQ 72
Query: 62 LNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA 121
L+ LP F T +P+++LA++L E+ + VFFT+SGSEA +T +K+ Y A
Sbjct: 73 LDKLPHVM-FGGFTHEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRA 131
Query: 122 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK-FDLPAPFVLHTDCPHYWRYAHPGE 180
G+P +KKFI+R+ YHG TL A S+ G AL +D P VLH P+ +R GE
Sbjct: 132 RGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGE 191
Query: 181 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIG-AGGVIPPPATYFEKVQAVVKKYDI 239
+EE+ A+ LE LIL+ GPETIAAFI EPV+G AGG++ PP Y ++V+ + KY I
Sbjct: 192 GDEEF-AEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGI 250
Query: 240 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQS 299
L IADEV FGR G MF C+ I PD++ AK L+ Y+P+ A+L S + E
Sbjct: 251 LLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGD 310
Query: 300 NTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIG 358
G+F HG TYSG+P++CA A+ L I +E +++E+V +I Q G++A +D P++G
Sbjct: 311 --AGAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVG 368
Query: 359 EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMS 418
++RG GLI E +K+ PF E +GA A + G+L+R GD I + PP I++
Sbjct: 369 DVRGLGLIGAIELVADKATKTPF--EARVGARVRAAALERGLLIRPLGDVIYLMPPLIIT 426
Query: 419 PEEVDELISKYGKALKATEERVK 441
EE+DEL+ +AL T +
Sbjct: 427 REEIDELVDALREALDETLADLL 449
>gnl|CDD|180994 PRK07480, PRK07480, putative aminotransferase; Validated.
Length = 456
Score = 506 bits (1306), Expect = e-178
Identities = 190/453 (41%), Positives = 277/453 (61%), Gaps = 22/453 (4%)
Query: 6 TAGWQSTD----VHPL------------VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG 49
TA Q+ D +HP VI ++EG Y++D G K LD +AGLWC +G
Sbjct: 7 TAELQALDAAHHLHPFSDMKALNEKGSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGY 66
Query: 50 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 109
L AA Q+ LP+Y++F+ T P+++LA +L E+ VFFTNSGSEAND
Sbjct: 67 GRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEV-APPGFNHVFFTNSGSEAND 125
Query: 110 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC 169
T +++V +Y G+P KK I+R+ YHGST+ ASL G+ +H++ DLP P ++H D
Sbjct: 126 TVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQ 185
Query: 170 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEK 229
P+++ T EE+ A LE IL+ G + +AAFI EP+ GAGGVI PPATY+ +
Sbjct: 186 PYWFGEG-GDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPE 244
Query: 230 VQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSP 289
+Q + +KYDIL +ADEVIC FGR G FG + IKPDL++ AK L+S Y+P+GA+ V
Sbjct: 245 IQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGD 304
Query: 290 EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV-NKIAPKFQDGV 348
V+EV+ + G F+HGFTYSGHPV+ AVA+ L+I ++ IVE+V + P Q +
Sbjct: 305 RVAEVLIEEG---GEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRL 361
Query: 349 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN 408
+ +D P++GE+RG GL+ E +K+ E F G+G C +G+++R GD
Sbjct: 362 RELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAVGDR 421
Query: 409 IMMSPPFIMSPEEVDELISKYGKALKATEERVK 441
+++SPP +++ E+DEL+ K KAL AT +
Sbjct: 422 MIISPPLVITHAEIDELVEKARKALDATAAELG 454
>gnl|CDD|236026 PRK07482, PRK07482, hypothetical protein; Provisional.
Length = 461
Score = 488 bits (1258), Expect = e-171
Identities = 186/429 (43%), Positives = 273/429 (63%), Gaps = 4/429 (0%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
++E EG + D G++Y+D+ AGL+C +G + A Q L +YH++
Sbjct: 33 GRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHG 92
Query: 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 135
T+ S+ L+K +++ A M+KV++ SGS+AN+TQ+KLVWYYNN LGRP KKK I+R +
Sbjct: 93 TEASITLSKRIIDRAPA-GMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWR 151
Query: 136 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 195
YHGS ++ SL+GL HQ FDLP VLHT+ PHY+R A G +EE++S A+ LE+
Sbjct: 152 GYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEE 211
Query: 196 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 255
LIL EGP+TIAAFIAEPV+G GG++PPPA Y+ +QAV+KKYDIL IADEV+ FGRLG+
Sbjct: 212 LILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGS 271
Query: 256 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 315
MFG D Y I+PDL++ AK L+SAY P+ +V +V +V+ S+ G+ HG+TYSGHP
Sbjct: 272 MFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHP 331
Query: 316 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGTEFADN 374
+ A A+ L I + N+V ++ F+ ++ AF D P++GE+RG G++ EF +
Sbjct: 332 ICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVAD 391
Query: 375 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRV--SGDNIMMSPPFIMSPEEVDELISKYGKA 432
+ PF P IG A + G++ R GD + +PP +++ E DE+++ A
Sbjct: 392 RDDRTPFDPALKIGPQVSAAALERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDA 451
Query: 433 LKATEERVK 441
+ R+
Sbjct: 452 VDEVLGRLL 460
>gnl|CDD|99735 cd00610, OAT_like, Acetyl ornithine aminotransferase family. This
family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). The
major groups in this CD correspond to ornithine
aminotransferase, acetylornithine aminotransferase,
alanine-glyoxylate aminotransferase, dialkylglycine
decarboxylase, 4-aminobutyrate aminotransferase,
beta-alanine-pyruvate aminotransferase,
adenosylmethionine-8-amino-7-oxononanoate
aminotransferase, and glutamate-1-semialdehyde
2,1-aminomutase. All the enzymes belonging to this
family act on basic amino acids and their derivatives
are involved in transamination or decarboxylation.
Length = 413
Score = 420 bits (1081), Expect = e-145
Identities = 146/427 (34%), Positives = 235/427 (55%), Gaps = 31/427 (7%)
Query: 11 STDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS 70
+ +PLVI ++EG+Y+YDV+G +YLD L+G+ LG + P +V A QL L +
Sbjct: 14 TVRPYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSL 73
Query: 71 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 130
+ +P+++LA+ LL + T + KVFF NSG+EA + +KL Y +KK
Sbjct: 74 GFF-YNEPAVELAELLLAL-TPEGLDKVFFVNSGTEAVEAALKLARAYTG------RKKI 125
Query: 131 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190
I+ + +YHG TL A SL+G F P VLH P+ +R LA
Sbjct: 126 ISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPP----------AELA 175
Query: 191 NNLEDLI--LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 248
++LE L L+E PE +AA I EP+ G GGVI PP Y + ++ + +K+ IL IADEV
Sbjct: 176 DDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT 235
Query: 249 AFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHG 308
FGR G MF + + ++PD+V+ K L +P+GA+L E+ + G HG
Sbjct: 236 GFGRTGKMFAFEHFGVEPDIVTLGKGLGGG-LPLGAVLGREEIMDAFP-----AGPGLHG 289
Query: 309 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGLIL 367
T+ G+P++CA A+ L++ +E ++E ++ ++ ++ P++G++RG GL++
Sbjct: 290 GTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMI 349
Query: 368 GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELI 426
G E +++ PP+ + A + G+L+R SG N I + PP I++ EE+DE +
Sbjct: 350 GIELVKDRATK---PPDKELAAKIIKAALERGLLLRPSGGNVIRLLPPLIITEEEIDEGL 406
Query: 427 SKYGKAL 433
+AL
Sbjct: 407 DALDEAL 413
>gnl|CDD|235913 PRK07036, PRK07036, hypothetical protein; Provisional.
Length = 466
Score = 416 bits (1070), Expect = e-143
Identities = 159/435 (36%), Positives = 251/435 (57%), Gaps = 9/435 (2%)
Query: 8 GWQSTDVH----PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 63
W LVI ++EG YV D +G++YLD + G+WC +G + A Q
Sbjct: 22 PWHDFSSLGKEGSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQAR 81
Query: 64 TLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 123
LP+Y F + T P+ +LA +L E+ + VF T GS A D+ ++ V YY N G
Sbjct: 82 RLPYYTPFGDMTNAPAAELAAKLAEL-APGDLNHVFLTTGGSTAVDSALRFVHYYFNVRG 140
Query: 124 RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP-GETE 182
RP KK I R +YHGST + ASL+G A +FD + V H P+ +R P G +E
Sbjct: 141 RPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYR--RPAGMSE 198
Query: 183 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 242
+ L + ED IL G + IAAFIAEP++G+GGVI PP Y +++ + ++YDIL+I
Sbjct: 199 AAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYI 258
Query: 243 ADEVICAFGRLGTMFGCDK-YSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT 301
+DEV+ FGRLG F + + I+PD+++FAK L+S Y P+GA+++S + +VI +
Sbjct: 259 SDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAK 318
Query: 302 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR 361
F+HGFTYSGHPV+CA A++ ++I + + E V ++ P F++ + + + P++G++R
Sbjct: 319 GNVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVR 378
Query: 362 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEE 421
G L+ E +K P + IG C++ G+LVR ++SPP I++ +
Sbjct: 379 GDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLEHLCVLSPPLIITRAQ 438
Query: 422 VDELISKYGKALKAT 436
+DE+++ A++ T
Sbjct: 439 IDEIVAILRAAIEET 453
>gnl|CDD|168967 PRK07481, PRK07481, hypothetical protein; Provisional.
Length = 449
Score = 376 bits (968), Expect = e-127
Identities = 150/440 (34%), Positives = 246/440 (55%), Gaps = 1/440 (0%)
Query: 1 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATA 60
P + P++I + +G YVYD++GKK LD + GLW +G + + A
Sbjct: 10 FWHPMAHPAEMKARPPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVR 69
Query: 61 QLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN 120
QL+ L +Y +F T +++L+ EL++MF M +VFF++ GS++ +T +KL Y
Sbjct: 70 QLDELEYYSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWK 129
Query: 121 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGE 180
G+P + KFI+ ++ YHG+ AS++G + ++ P H + P +R +
Sbjct: 130 VRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQ 189
Query: 181 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 240
EE + A LE I +GP+TIAAFIAEPV GAGGVI PPA ++ V+ V ++ IL
Sbjct: 190 DPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGIL 249
Query: 241 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 300
IADEV+ FGR G+ FG + +KPD++ AK ++S Y+P+GA +V+ +++ + ++
Sbjct: 250 LIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANAD 309
Query: 301 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-SPIIGE 359
G+ HG+TYSGHPV+CA A+ L I ++ K +G++ + ++G+
Sbjct: 310 FGGAIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGD 369
Query: 360 IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSP 419
+RG GL+L + +K+ EP P G ++G+LVR SG I++SPP ++
Sbjct: 370 VRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSGTKIILSPPLVIQR 429
Query: 420 EEVDELISKYGKALKATEER 439
E+VD ++ L A +
Sbjct: 430 EDVDRIVDALDAGLSAVPFQ 449
>gnl|CDD|235823 PRK06541, PRK06541, hypothetical protein; Provisional.
Length = 460
Score = 350 bits (901), Expect = e-117
Identities = 158/439 (35%), Positives = 233/439 (53%), Gaps = 21/439 (4%)
Query: 13 DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW 72
D VI + EG Y++D GK+YLD LAGL+ +G L AA Q TL F+ W
Sbjct: 32 DAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFF-PLW 90
Query: 73 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 132
+ P+++LA E L + +VFFT GSEA ++ KL Y G+P K K I+
Sbjct: 91 SYAHPPAIELA-ERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVIS 149
Query: 133 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 192
R +YHG+T A +++GLPA F+ P +++R G+ E + A+
Sbjct: 150 RAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADR 209
Query: 193 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 252
+E+ I EGP+T+AA EPV AGG PPP YFE+V+ + +YD+L ++DEVICAFGR
Sbjct: 210 IEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGR 269
Query: 253 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 312
LG MFGC+++ PD+++ AK ++S Y P+GA++ S + E F HG+T+
Sbjct: 270 LGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTM---FLHGYTFG 326
Query: 313 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFA 372
GHPVS AVA+ L I++ +++ V P F+ ++ D PI+G++RG G G E
Sbjct: 327 GHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELV 386
Query: 373 DNKSPNEPFPPE------WGI--GAYFGAQCEKHGMLVRVS--GDN-IMMSPPFIMSPEE 421
+K+ E F + G A F A G+ R GD + ++PP I EE
Sbjct: 387 KDKATKETFTDDESERLLRGFLSPALFEA-----GLYCRADDRGDPVVQLAPPLISGQEE 441
Query: 422 VDELISKYGKALKATEERV 440
DE+ L R+
Sbjct: 442 FDEIEQILRSVLTEAWARL 460
>gnl|CDD|181707 PRK09221, PRK09221, beta alanine--pyruvate transaminase;
Provisional.
Length = 445
Score = 348 bits (894), Expect = e-116
Identities = 156/437 (35%), Positives = 236/437 (54%), Gaps = 17/437 (3%)
Query: 4 PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 63
PFTA Q P ++ +EG Y D +G+K LD AGLWC G P +V A Q
Sbjct: 21 PFTANRQFKA-APRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAA 79
Query: 64 TLPFYHSFWNRTTKP-SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL 122
TL + +F + P + +LA+ L E+ + VFFTNSGSE+ DT +K+ Y+ A
Sbjct: 80 TLDYAPAF--QMGHPLAFELAERLAEL-APGGLDHVFFTNSGSESVDTALKIALAYHRAR 136
Query: 123 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET- 181
G+ + + I R++ YHG S+ G+ + F P V H PH +
Sbjct: 137 GQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHL--PHTLDLPENAFSK 194
Query: 182 -EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 240
+ E+ LA++LE L+ TIAA I EP+ G+ GV+ PP Y ++++ + K+ IL
Sbjct: 195 GQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGIL 254
Query: 241 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 300
I DEVI FGRLG F +++ + PD+++FAK L++ +P+GA++ S E+ +
Sbjct: 255 LIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPE 314
Query: 301 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI 360
F HG+TYS HPV+CA + L IY+E ++ E+ ++AP F+D V + P + +I
Sbjct: 315 YAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLKGLPHVIDI 374
Query: 361 RGTGLILGTEFADNKSPNEPFPPEWGIGAY-FGAQCEKHGMLVRVSGDNIMMSPPFIMSP 419
R GL+ G E A P P G Y +C + G+LVR +GD I +SPP I+
Sbjct: 375 RNIGLVAGIELA-------PRPGAPGARGYEAFMKCFEKGLLVRYTGDTIALSPPLIIEK 427
Query: 420 EEVDELISKYGKALKAT 436
++DEL+ G AL+A
Sbjct: 428 AQIDELVDALGDALRAV 444
>gnl|CDD|171472 PRK12403, PRK12403, putative aminotransferase; Provisional.
Length = 460
Score = 340 bits (873), Expect = e-113
Identities = 168/431 (38%), Positives = 254/431 (58%), Gaps = 10/431 (2%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
P V+ + EG +++D +GK+YLD ++GLWCT LG L AAA Q+ LP+Y+ F++ T
Sbjct: 37 PRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFH-T 95
Query: 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 135
T P++ ELL + +TNSGSEAN+ ++ V Y LG+P KK I R
Sbjct: 96 THPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWN 155
Query: 136 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGE-TEEEYSTRLANNLE 194
YHGSTL A +L G+ +H+ L P V H D P YW YA+ GE T E+ R A LE
Sbjct: 156 GYHGSTLAATALGGMKFMHEMGGL-IPDVAHIDEP-YW-YANGGELTPAEFGRRAALQLE 212
Query: 195 DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 254
+ IL+ G E +A F+AEP GAGG+I PP +Y+ ++Q + ++YD+L ADEVI FGR G
Sbjct: 213 EKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTG 272
Query: 255 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 314
F + + +PD +S AK L+S Y+P+G +++S ++E + Q G F+HG TYSGH
Sbjct: 273 EWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQG---GVFAHGLTYSGH 329
Query: 315 PVSCAVAIEALKIYKERNIVEQV-NKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGTEFA 372
PV+ AVAI LK ++ +V +V + P Q ++ F D P++GE++G GL+ +FA
Sbjct: 330 PVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFA 389
Query: 373 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKA 432
++K+ + F E + + G+++R + ++M+P + E+DEL+ K A
Sbjct: 390 EDKATRKRFANENDLAWRCRTIGFEEGVIIRSTLGRMIMAPALVAGRAEIDELVDKTRIA 449
Query: 433 LKATEERVKEL 443
+ T V L
Sbjct: 450 VDRTAREVGVL 460
>gnl|CDD|236027 PRK07483, PRK07483, hypothetical protein; Provisional.
Length = 443
Score = 335 bits (861), Expect = e-111
Identities = 157/432 (36%), Positives = 244/432 (56%), Gaps = 19/432 (4%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH-SFWNR 74
V EG Y+ D GK+YLD+ G + LG S PR++AA AQ++ L + H SF+
Sbjct: 13 LPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFF-- 70
Query: 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 134
TT+P+ LA L+ A + V+F + GSEA + +KL Y +G+P ++ FIAR+
Sbjct: 71 TTEPAEALADRLVAAAPAG-LEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARR 129
Query: 135 KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY-WRYAHPGETEEEYSTRLANNL 193
+SYHG+TL A ++ G + F P H P Y +R GE++E Y RLA+ L
Sbjct: 130 QSYHGNTLGALAIGGNAWRREPF-APLLIEAHHVSPCYAYREQRAGESDEAYGQRLADEL 188
Query: 194 EDLILKEGPETIAAFIAEPVIGA-GGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 252
E IL+ GP+T+AAF+AE V+GA G +PP YF++++ V +Y +L I DEV+C GR
Sbjct: 189 EAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGR 248
Query: 253 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 312
GT+F C++ + PDLV+ AK L + Y PIGA+L S + + I S G F HG TY
Sbjct: 249 TGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGS---GFFQHGHTYL 305
Query: 313 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGTEF 371
GH +CA A+ ++ E ++ V + + ++ P +G+IRG GL +G E
Sbjct: 306 GHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVEL 365
Query: 372 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR--------VSGDNIMMSPPFIMSPEEVD 423
+++ PF P + A + G++V V GD+++++PPFI++ ++D
Sbjct: 366 VADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQID 425
Query: 424 ELISKYGKALKA 435
E++ + G A+ A
Sbjct: 426 EIVERLGDAIDA 437
>gnl|CDD|223238 COG0160, GabT, 4-aminobutyrate aminotransferase and related
aminotransferases [Amino acid transport and metabolism].
Length = 447
Score = 324 bits (833), Expect = e-107
Identities = 143/432 (33%), Positives = 231/432 (53%), Gaps = 31/432 (7%)
Query: 15 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNR 74
PLVI ++EG+Y+YDV+G +YLD L+G+ LG + PR+V A QL L H+ R
Sbjct: 38 FPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHT---R 94
Query: 75 --TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 132
+P ++LA++L + S + KVFF NSG+EA + +K+ Y GRP IA
Sbjct: 95 DLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYT---GRPG---VIA 148
Query: 133 RQKSYHGSTLIAASLSGLPALHQK-FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191
++HG TL A SL+G ++ F P V H P+ +R G EE
Sbjct: 149 FDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYR-CPFGIGGEECGDDALE 207
Query: 192 NLEDLI--LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 249
+E + L+ GPE +AA I EP+ G GG+I PP + + ++ + +++ IL IADEV
Sbjct: 208 YIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTG 267
Query: 250 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 309
FGR G MF + + ++PD+V+ AK+L +P+ A++ E+ HG
Sbjct: 268 FGRTGKMFAFEHFGVEPDIVTLAKSL-GGGLPLSAVVGRAEI--------MDWPPGGHGG 318
Query: 310 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILG 368
T+ G+PV+CA A+ L + +E N++E+ ++ +D ++ P+IG++RG GL++G
Sbjct: 319 TFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIG 378
Query: 369 TEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPEEVDEL 425
E ++ EP + A A+ + G+L+ G + + + PP +S EE+DE
Sbjct: 379 VELVKDRDTKEPDA---ELAAKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEG 435
Query: 426 ISKYGKALKATE 437
+ +ALK
Sbjct: 436 LDILEEALKEAL 447
>gnl|CDD|180330 PRK05965, PRK05965, hypothetical protein; Provisional.
Length = 459
Score = 324 bits (832), Expect = e-107
Identities = 142/424 (33%), Positives = 236/424 (55%), Gaps = 3/424 (0%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
V+ ++G+ + D +G + LD+ AGLWC +G + +V AA Q+ LP+ +++
Sbjct: 29 VTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFG 88
Query: 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 135
++P++ LA +L E S + V+FT GS+A D+ V+ + +Y NA GRP+KK+FI+ ++
Sbjct: 89 SEPAIRLAAKLAERAPGS-LNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLER 147
Query: 136 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 195
YHGS+ + A L+ LPA H+ FDLP P+ P+ +R + + + +A L
Sbjct: 148 GYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAA-LRA 206
Query: 196 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 255
+ + G + +AAF EP+ G+GGVI PP + + ++ ++ ILF+ADEVI FGR G
Sbjct: 207 KVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGP 266
Query: 256 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 315
+F C+ + PDL++ AK L+S Y+P+GA+L+S V + I + HG+TYS HP
Sbjct: 267 LFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHP 326
Query: 316 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNK 375
VS AV +E L++Y E ++ K P+F G+ A P++G++RG GL+ E +K
Sbjct: 327 VSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADK 386
Query: 376 SPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYGKALK 434
+ PF + +G++ R GD ++ +P + E D + + K L
Sbjct: 387 ATKTPFDAALDPADRIFDRAYANGLVFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLD 446
Query: 435 ATEE 438
Sbjct: 447 DVLA 450
>gnl|CDD|233000 TIGR00508, bioA, adenosylmethionine-8-amino-7-oxononanoate
transaminase. All members of the seed alignment have
been demonstrated experimentally to act as EC 2.6.1.62,
an enzyme in the biotin biosynthetic pathway. Alternate
names include 7,8-diaminopelargonic acid
aminotransferase, DAPA aminotransferase, and
adenosylmethionine-8-amino-7-oxononanoate
aminotransferase. The gene symbol is bioA in E. coli and
BIO3 in S. cerevisiae [Biosynthesis of cofactors,
prosthetic groups, and carriers, Biotin].
Length = 417
Score = 322 bits (828), Expect = e-107
Identities = 141/425 (33%), Positives = 230/425 (54%), Gaps = 23/425 (5%)
Query: 4 PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 63
P+T + PL IE++EG Y+YD +G++Y+D ++ W G + P + AA QL+
Sbjct: 4 PYTQ--MKDALPPLPIERAEGVYLYDEDGREYIDGISSWWVNIHGHNHPEINAAIKEQLD 61
Query: 64 TLPFYHS-FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL 122
L H F T +P+++LA+ L+E+ T + KVFF++SGS A + +K+ Y
Sbjct: 62 KLE--HVMFGGLTHEPAIELAERLVEI-TPEGLEKVFFSDSGSVAVEVALKMALQYWQNQ 118
Query: 123 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPF-VLHTDCPHYWRYAHPGET 181
GRP K +F+A + YHG T A S+ + H F+ P F V+ P +R P +
Sbjct: 119 GRPGKTRFLAFRNGYHGDTFGAMSVGDVGGFHALFE-PLLFEVVFIPAPPCYRCWDPDDC 177
Query: 182 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYDIL 240
E E LE L+ + E IAAFI EP++ GAGG+ P Y K++ + +Y +L
Sbjct: 178 EAEC----LAALEALLEEHADE-IAAFIVEPLVQGAGGMRFYPPEYLRKLRELCDEYGVL 232
Query: 241 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 300
IADE+ FGR G +F C+ + PD++ +K L+ Y+P+ A L + E+ E +
Sbjct: 233 LIADEIATGFGRTGKLFACEHAGVTPDILCLSKGLTGGYLPLAATLTTDEIYEAF-YSDD 291
Query: 301 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI 360
+F HG TY+G+P++CA A+ +L + +E + +EQV +I + + G+ D P + ++
Sbjct: 292 EGKAFMHGHTYTGNPLACAAALASLDLLEEEDWLEQVARIEAQLRAGLAPLRDHPGVADV 351
Query: 361 RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPE 420
R G I E EP+ GA + G+L+R G+ I + PP+I++ E
Sbjct: 352 RVLGAIGAVEL---VRDVEPYI-----GAKIQQFFLERGVLLRPLGNVIYLMPPYIITDE 403
Query: 421 EVDEL 425
E+++L
Sbjct: 404 ELEKL 408
>gnl|CDD|201078 pfam00202, Aminotran_3, Aminotransferase class-III.
Length = 338
Score = 309 bits (795), Expect = e-103
Identities = 128/356 (35%), Positives = 194/356 (54%), Gaps = 18/356 (5%)
Query: 18 VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK 77
I K++G ++YDV+G++YLD L+G+ LG P++V A Q + L + SF TT+
Sbjct: 1 FITKAKGVWLYDVDGRRYLDFLSGIAVVNLGHCHPKIVQAVKEQADKL-THTSFRAFTTE 59
Query: 78 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSY 137
P+L LA++L + T + +VFF NSGSEAN+T +KL Y G K K IA +
Sbjct: 60 PALQLAEKLAQ-LTPGGLDRVFFMNSGSEANETAIKLARQYAKKKGATGKTKIIAFSGGF 118
Query: 138 HGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLI 197
HG TL A S++G + F P V P Y EEE A+ LI
Sbjct: 119 HGRTLGALSVTGSSGYKKGFGPSLPGVYF--LP----YPDLEAAEEE--LACADEALRLI 170
Query: 198 LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF 257
+ IAA I EP+ G GGV+PPP + ++ + KK+ +L IADEV FGR G +F
Sbjct: 171 KAVHDDNIAAVIVEPIQGEGGVVPPPPGFLAGLREICKKHGVLLIADEVQTGFGRTGKLF 230
Query: 258 GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS 317
C+ Y + PD+++ AKAL+ P+ A+L + E+ + H SHG T+ G+P++
Sbjct: 231 ACEHYGVTPDIMTLAKALTGGL-PLSAVLATAEIMQAFHPG-------SHGGTFGGNPLA 282
Query: 318 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFAD 373
CA A+ L I ++ N+++ + + G+ A D P+IG++RG GL++ E
Sbjct: 283 CAAALAVLDIIEDENLLQNAQEKGDYLRKGLLALQDKPVIGDVRGKGLMIAIEIVK 338
>gnl|CDD|181078 PRK07678, PRK07678, aminotransferase; Validated.
Length = 451
Score = 313 bits (803), Expect = e-103
Identities = 144/428 (33%), Positives = 247/428 (57%), Gaps = 16/428 (3%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
+V+ K+EG++V D+ G +YLD ++GLWC +G L AA QL TL ++ ++
Sbjct: 30 TMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFP--LTQS 87
Query: 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 135
+P++ LA++L E + +FF+NSGSEAN+T K+ Y+ G P++ KFI+R +
Sbjct: 88 HEPAIKLAEKLNEWLGGEYV--IFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYR 145
Query: 136 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 195
+YHG+++ A + +G K++ AP LH P +R E+E+ Y ++
Sbjct: 146 AYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYR-MPGIESEDIYDLECVKEIDR 204
Query: 196 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 255
++ E ETIAA I EP+I GGV+ PP Y + V+ + +K+ L I+DEVIC FGR G
Sbjct: 205 VMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGK 264
Query: 256 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 315
FG Y +KPD+++ AK ++SAY+P+ A V E+ E + F H T+ G+P
Sbjct: 265 AFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEY-EHFRHVNTFGGNP 323
Query: 316 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADN 374
+CA+A++ L+I + N++E+ ++ + +K + P++G+IRG GL++G E ++
Sbjct: 324 AACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVND 383
Query: 375 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGD------NIM-MSPPFIMSPEEVDELIS 427
K EP + + + A C++ G+++ +GD N++ +SPP ++S EE+ ++
Sbjct: 384 KETKEPADND-KVASVVAA-CKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVG 441
Query: 428 KYGKALKA 435
AL+
Sbjct: 442 TLKTALER 449
>gnl|CDD|183999 PRK13360, PRK13360, omega amino acid--pyruvate transaminase;
Provisional.
Length = 442
Score = 307 bits (787), Expect = e-100
Identities = 148/437 (33%), Positives = 230/437 (52%), Gaps = 15/437 (3%)
Query: 4 PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 63
PFTA Q P ++ ++G Y +G++ LD AGLWC G P +V A AQ
Sbjct: 18 PFTANRQFKK-APRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAG 76
Query: 64 TLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 123
L + +F K +LA + E+ + VFFTNSGSE+ DT +K+ Y+ A G
Sbjct: 77 ELDYAPAFQMGHPKA-FELANRIAEIAPGG-LNHVFFTNSGSESVDTALKIALAYHRARG 134
Query: 124 RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET-- 181
++ + I R++ YHG S+ G+ + F P V H PH A +
Sbjct: 135 EGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHL--PHTLDLARNAFSKG 192
Query: 182 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILF 241
+ E+ LA+ LE L+ TIAA I EPV G+ GV+ PP Y ++++ + K+ IL
Sbjct: 193 QPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILL 252
Query: 242 IADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT 301
I DEVI FGRLG F + + PDL++ AK L++ +P+GA+ VS E+ +
Sbjct: 253 IFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEA 312
Query: 302 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR 361
F HG+TYSGHP++CA A+ L +Y+ ++ + ++AP ++D + + D+P + +IR
Sbjct: 313 GIEFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLRDAPHVIDIR 372
Query: 362 GTGLILGTEFADNKSPNEPFPPEWGIGAY-FGAQCEKHGMLVRVSGDNIMMSPPFIMSPE 420
GL+ E A P + G AY +C + G+++R +GD + +SPP I+
Sbjct: 373 NLGLVGAVELA-------PRDGKPGKRAYEVFLKCFEKGLMIRYTGDILALSPPLIIEEA 425
Query: 421 EVDELISKYGKALKATE 437
++DEL +ALK T
Sbjct: 426 QIDELFDILAQALKETI 442
>gnl|CDD|235884 PRK06917, PRK06917, hypothetical protein; Provisional.
Length = 447
Score = 306 bits (786), Expect = e-100
Identities = 144/438 (32%), Positives = 227/438 (51%), Gaps = 28/438 (6%)
Query: 18 VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTT 76
VI +G Y+YD NG KY D +G +G + A Q + F Y S + T+
Sbjct: 16 VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQF--TS 73
Query: 77 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKS 136
+P+ LAK+L ++ + FF NSGSEAN+T +K+ + G K K ++R S
Sbjct: 74 EPAEKLAKKLSDLSPGD-LNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMS 132
Query: 137 YHGSTLIAASLSGLPALHQKF-----DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191
YHG T+ A S+SG P Q+F D P P+ +R + A
Sbjct: 133 YHGITMGALSMSGHPLRRQRFVSLLEDYPT-----ISAPYCYRCPV-QKVYPTCQLACAT 186
Query: 192 NLEDLILKEGPETIAAFIAEPVIGA-GGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250
LE I + G E IAAFIAEP+IGA G + PP Y++ ++ + YDILFIADEV+
Sbjct: 187 ELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGL 246
Query: 251 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 310
GR G MF + + ++PD+++ K L + Y PI A +VS V E I S ++ S G T
Sbjct: 247 GRTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMS---GHT 303
Query: 311 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGT 369
S +P+S A A+ L+ ++ N+ E+ + G++ S IIG++RG GL++G
Sbjct: 304 LSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGV 363
Query: 370 EFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV--------RVSGDNIMMSPPFIMSPEE 421
EF +K +PF + + + K+G+L+ GD ++++PP ++ E
Sbjct: 364 EFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSE 423
Query: 422 VDELISKYGKALKATEER 439
+DEL+S + K+++ ++
Sbjct: 424 LDELLSIFAKSVEEMMQK 441
>gnl|CDD|227325 COG4992, ArgD, Ornithine/acetylornithine aminotransferase [Amino
acid transport and metabolism].
Length = 404
Score = 295 bits (758), Expect = 1e-96
Identities = 133/427 (31%), Positives = 208/427 (48%), Gaps = 58/427 (13%)
Query: 15 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS---F 71
P+VI + EG+YV+D G++YLD AG+ LG P LV A Q L +H F
Sbjct: 24 LPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKL--WHVSNLF 81
Query: 72 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 131
+N P +LA++L+E+ +VFF NSG+EAN+ +KL Y G P K K I
Sbjct: 82 YNE---PQAELAEKLVELS--PFADRVFFCNSGAEANEAALKLARKYT---GDPEKSKII 133
Query: 132 ARQKSYHGSTLIAASLSGLPALHQKF-DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190
A + S+HG TL A S +G P + F L F + +
Sbjct: 134 AFENSFHGRTLGALSATGQPKYRKGFGPLLPGF-------RHVPF--------------- 171
Query: 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250
N++E L E AA I EP+ G GGVIP P + + ++ + ++ L I DEV
Sbjct: 172 NDIEAL-EAAIDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGL 230
Query: 251 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 310
GR G +F + Y ++PD+++ AKAL + PIGA+L + E++ HG T
Sbjct: 231 GRTGKLFAYEHYGVEPDILTLAKALGGGF-PIGAMLATEEIASAFT-------PGDHGST 282
Query: 311 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-SPIIGEIRGTGLILGT 369
+ G+P++CAVA+ L++ E ++E V + ++ P++ E+RG GL++G
Sbjct: 283 FGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGI 342
Query: 370 EFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISK 428
E + + G+LV +G N++ PP +++ EE+DE +
Sbjct: 343 ELKEPY-----------RARDIVRALREEGVLVLPAGPNVIRFLPPLVITEEEIDEALDA 391
Query: 429 YGKALKA 435
+AL A
Sbjct: 392 LERALAA 398
>gnl|CDD|180746 PRK06916, PRK06916, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 460
Score = 292 bits (749), Expect = 1e-94
Identities = 143/440 (32%), Positives = 234/440 (53%), Gaps = 11/440 (2%)
Query: 4 PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 63
PFT + PL+IE+ EG +YDVNG +Y D ++ +W G P L A QLN
Sbjct: 27 PFTQMKDYLEEDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLN 86
Query: 64 TLPFYHS-FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL 122
+ HS PS+ LA++L+E+ + KVF+++SG+ A + +K+ + Y
Sbjct: 87 KIA--HSTLLGLANVPSILLAEKLIEV-VPEGLKKVFYSDSGATAVEIAIKMAFQYWQNK 143
Query: 123 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHT-DCPHYWRYAHP-GE 180
G+P K++F+ + +YHG T+ A S+ + HQ + + + P+ + Y P G
Sbjct: 144 GKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVY---SSLLFEAIKMPYPYTYRSPYGN 200
Query: 181 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYDI 239
+ E + LE+L LKE E IAA I EP++ GAGG+I P Y + ++ + KY++
Sbjct: 201 DKAEIVKKHLEELEEL-LKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNV 259
Query: 240 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQS 299
LFI DEV FGR G MF C+ ++ PD+++ K L+ Y+PI + + E+ +
Sbjct: 260 LFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDY 319
Query: 300 NTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGE 359
+F HG +Y+G+P+ CAVA+ L++Y++ N++EQV + ++ +G+
Sbjct: 320 EEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVGD 379
Query: 360 IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSP 419
IR GL++G E NK EPF +G + + GML R G+ I+ PP +
Sbjct: 380 IRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLGNTIVFMPPLASTI 439
Query: 420 EEVDELISKYGKALKATEER 439
+E+DE++ KA+ E
Sbjct: 440 DELDEMLRILYKAISDVTEG 459
>gnl|CDD|235056 PRK02627, PRK02627, acetylornithine aminotransferase; Provisional.
Length = 396
Score = 287 bits (738), Expect = 1e-93
Identities = 130/425 (30%), Positives = 209/425 (49%), Gaps = 57/425 (13%)
Query: 15 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS---F 71
P+ + EG+ ++D +GK+YLD LAG+ LG P+LV A Q L H+ +
Sbjct: 21 LPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKL--IHTSNLY 78
Query: 72 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 131
+ +P +LA++L+E+ S M KVFF NSG+EAN+ +KL Y + G K + I
Sbjct: 79 YI---EPQEELAEKLVEL---SGMDKVFFCNSGAEANEAAIKLARKYGHKKGI-EKPEII 131
Query: 132 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191
+ S+HG TL S +G P + F+ P V G + N
Sbjct: 132 TAENSFHGRTLATLSATGQPKYQEGFE---PLV-------------EGFIYVPF-----N 170
Query: 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 251
++E L +T A + EP+ G GGV P Y + ++ + + IL I DEV G
Sbjct: 171 DIEALKAAITDKTAAVML-EPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMG 229
Query: 252 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 311
R G +F Y I+PD+++ AK L +PIGA+L +V++V HG T+
Sbjct: 230 RTGKLFAYQHYGIEPDIMTLAKGLGGG-VPIGAVLAKEKVADV-------FTPGDHGSTF 281
Query: 312 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTE 370
G+P++CA A+ ++I +E ++E ++ + ++ P I E+RG GL++G E
Sbjct: 282 GGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIE 341
Query: 371 FADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKY 429
A + + G+L+ V+GDN + + PP I+S EE+DE + +
Sbjct: 342 LDRP-------------AAEIVKKALEKGLLINVTGDNVLRLLPPLIISKEEIDEAVDRL 388
Query: 430 GKALK 434
+ LK
Sbjct: 389 EEVLK 393
>gnl|CDD|235687 PRK06062, PRK06062, hypothetical protein; Provisional.
Length = 451
Score = 288 bits (740), Expect = 2e-93
Identities = 141/439 (32%), Positives = 224/439 (51%), Gaps = 32/439 (7%)
Query: 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN 73
++P+VI +EGSYV+D G++YLD + L T +G P++VAA Q L
Sbjct: 34 INPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLC------- 86
Query: 74 RTTKPSL------DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 127
T P+ + A+ + E ++KVFFTN G++AN+ V++ + GRP
Sbjct: 87 -TVAPAHANDARSEAARLIAER-APGDLSKVFFTNGGADANEHAVRMARLHT---GRP-- 139
Query: 128 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187
K ++ +SYHG T A +L+G P D V+H P +R TEEE
Sbjct: 140 -KVLSAYRSYHGGTGSAINLTGDPRRWPN-DTGRAGVVHFFGPFLYRSEFHATTEEEECE 197
Query: 188 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI 247
R +LE +I EGP TIAA + E V G G++ PP Y V+ + ++ I+ IADEV+
Sbjct: 198 RALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVM 257
Query: 248 CAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSH 307
FGR G F + + + PDL++FAK ++S Y+P+G + +S ++ + +
Sbjct: 258 AGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFADR-----PYPG 312
Query: 308 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKI-APKFQDGVKAFSD-SPIIGEIRGTGL 365
G TYSGHP++CA A+ + +E IVE +I A G++ ++ P +GE+RG G+
Sbjct: 313 GLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGV 372
Query: 366 ILGTEFADNKSPNEPFPPEWGIGAY---FGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEV 422
E ++ EP P A A C++ G+L V+G+ I + PP ++ +EV
Sbjct: 373 FWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVNGNRIHVVPPCTVTEDEV 432
Query: 423 DELISKYGKALKATEERVK 441
E ++ AL +
Sbjct: 433 REGLAILDAALAVADAATA 451
>gnl|CDD|235599 PRK05769, PRK05769, 4-aminobutyrate aminotransferase; Provisional.
Length = 441
Score = 258 bits (662), Expect = 9e-82
Identities = 140/441 (31%), Positives = 230/441 (52%), Gaps = 36/441 (8%)
Query: 2 LAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ 61
LA T W PLVIE+ EG +V DV+G YLD AG+ T +G + P++V A Q
Sbjct: 28 LAQSTRRWY-----PLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQ 82
Query: 62 LNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA 121
++S + +P+++LA+ L+E+ KVFFTNSG+E+N+ +K+ Y+
Sbjct: 83 AEKF-LHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHT-- 139
Query: 122 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP-APFVLHTDCPHYWRYAHPGE 180
GR IA ++HG T + SL+ + +K P P V+H P+ +R E
Sbjct: 140 -GRK---YIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIE 195
Query: 181 TEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 238
EE + + +ED + K+ PE +AA I EP+ G GG + PP +F++++ + KY
Sbjct: 196 NPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYG 255
Query: 239 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQ 298
IL I DEV GR G MF + + ++PD+++ AKA++ +P+GA++ E+
Sbjct: 256 ILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGG-LPLGAVIGRAEL------- 307
Query: 299 SNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PII 357
L SH T+ G+PV+ A A+ L+ +E ++E K+ + +K + I
Sbjct: 308 -MFLPPGSHANTFGGNPVAAAAALATLEELEE-GLLENAQKLGEYLRKELKELKEKYEFI 365
Query: 358 GEIRGTGLILGTEFADNKSPNEPFPPE--WGIGAYFGAQCEKHGMLVRVSGDN-IMMSPP 414
G++RG GL++G E ++ EP P + F K G+L+ +G + I + PP
Sbjct: 366 GDVRGLGLMIGVELVKDR--KEPDPKLRDKVLYEAF-----KRGLLLLGAGKSAIRIIPP 418
Query: 415 FIMSPEEVDELISKYGKALKA 435
I++ EE D + +A+K
Sbjct: 419 LIITEEEADIGLEILEEAIKE 439
>gnl|CDD|233098 TIGR00707, argD, transaminase, acetylornithine/succinylornithine
family. This family of proteins, for which ornithine
aminotransferases form an outgroup, consists mostly of
proteins designated acetylornithine aminotransferase.
However, the two very closely related members from E.
coli are assigned different enzymatic activities. One is
acetylornithine aminotransferase (EC 2.6.1.11), ArgD, an
enzyme of arginine biosynthesis, while another is
succinylornithine aminotransferase, an enzyme of the
arginine succinyltransferase pathway, an
ammonia-generating pathway of arginine catabolism (See
MEDLINE:98361920). Members of this family may also act
on ornithine, like ornithine aminotransferase (EC
2.6.1.13) (see MEDLINE:90337349) and on
succinyldiaminopimelate, like
N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17,
DapC, an enzyme of lysine biosynthesis) (see
MEDLINE:99175097).
Length = 379
Score = 253 bits (649), Expect = 1e-80
Identities = 139/420 (33%), Positives = 209/420 (49%), Gaps = 52/420 (12%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
P+ I + +G+YVYDVNGK+YLD +AG+ +LG + P+LV A QL L H
Sbjct: 10 PVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKL--VHVSNLYY 67
Query: 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 135
T+P +LA++L+E S +VFF NSG+EAN+ +KL Y G KKK IA +
Sbjct: 68 TEPQEELAEKLVE---HSGADRVFFCNSGAEANEAALKLARKYTGDKG-KEKKKIIAFEN 123
Query: 136 SYHGSTLIAASLSGLPALHQKFD-LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE 194
S+HG T+ A S +G P + F+ L F Y Y +L+
Sbjct: 124 SFHGRTMGALSATGQPKYQKGFEPLVPGF-------SYAPYNDI------------ESLK 164
Query: 195 DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 254
I E AA I EP+ G GGV P A + + ++ + K D L I DEV GR G
Sbjct: 165 KAIDDE----TAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG 220
Query: 255 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 314
F + Y I+PD+++ AK L PIGA L EV+E T G HG T+ G+
Sbjct: 221 KFFAYEHYGIEPDIITLAKGLGGGV-PIGATLAKEEVAEAF-----TPG--DHGSTFGGN 272
Query: 315 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADN 374
P++CA A+ L++ ++ ++E V + F++ ++ + E+RG GL+LG E
Sbjct: 273 PLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIELEAP 332
Query: 375 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYGKAL 433
+ + G+LV +G ++ PP I++ EE+DE +S +A+
Sbjct: 333 -------------CKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEEAI 379
>gnl|CDD|240281 PTZ00125, PTZ00125, ornithine aminotransferase-like protein;
Provisional.
Length = 400
Score = 247 bits (633), Expect = 6e-78
Identities = 138/436 (31%), Positives = 213/436 (48%), Gaps = 52/436 (11%)
Query: 13 DVHPL--VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-H 69
+ HPL V+++ +G +V+DV GKKY D L+ G P+++AA Q L
Sbjct: 9 NYHPLPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSR 68
Query: 70 SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRPNK 127
+F+N + K + ++F KV NSG+EA +T +K W Y N+
Sbjct: 69 AFYNDVLGLA---EKYITDLF---GYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQ 122
Query: 128 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187
K I ++ G T+ A S S P + F PFV PG +Y
Sbjct: 123 AKIIFCNGNFSGRTIGACSASTDPKCYNNF---GPFV-------------PGFELVDY-- 164
Query: 188 RLANNLEDL-ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 246
N++E L L + P +AAFI EP+ G GVI P Y ++V + KKY++L I DE+
Sbjct: 165 ---NDVEALEKLLQDPN-VAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEI 220
Query: 247 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 306
GR G + D +KPD+V KALS PI A+L + +V VI
Sbjct: 221 QTGLGRTGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKPG-------E 273
Query: 307 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGL 365
HG TY G+P++CAVA+EAL++ KE + E ++ F+DG+K SP + EIRG GL
Sbjct: 274 HGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGL 333
Query: 366 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDE 424
+ F + N W + +++G+L + + DNI+ +PP +++ E++D+
Sbjct: 334 LNAIVFDHSDGVN-----AWDLCLKL----KENGLLAKPTHDNIIRFAPPLVITKEQLDQ 384
Query: 425 LISKYGKALKATEERV 440
+ K LK+ +
Sbjct: 385 ALEIIKKVLKSFDSNK 400
>gnl|CDD|180800 PRK07030, PRK07030, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 466
Score = 247 bits (633), Expect = 3e-77
Identities = 134/430 (31%), Positives = 230/430 (53%), Gaps = 42/430 (9%)
Query: 16 PLV-IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP------FY 68
PL+ I + EG ++ D GK+YLD+++ W G + PR+ Q++ L F
Sbjct: 29 PLIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFS 88
Query: 69 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 128
H +P ++L++ L+++ T +++ F+ ++GS A + +K+ ++Y G+P KK
Sbjct: 89 H-------EPVIELSERLVKI-TPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKK 140
Query: 129 KFIARQKSYHGSTLIAASLSGL--------PALHQKFDLPAPFVLHTDCPHYWRYAHPGE 180
+F+ SYHG TL A S+ + P L +P+P DC Y R G
Sbjct: 141 RFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSP-----DC--YLR--PEGM 191
Query: 181 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYDI 239
+ EE+S R+ ++E L E + IAA I EP+I GAGG+ Y + ++ +Y +
Sbjct: 192 SWEEHSRRMFAHMEQ-TLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGV 250
Query: 240 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQS 299
I DE+ FGR GTMF C++ I+PD + +KAL+ Y+P+ A+L + V + +
Sbjct: 251 HLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDY 310
Query: 300 NTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGE 359
TL +F H +Y+G+P++CA A+ L I+++ N++E +A + + +D P + E
Sbjct: 311 PTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLADHPHVAE 370
Query: 360 IRGTGLILGTEFADNKSPNEPFPPEW----GIGAYFGAQCEKHGMLVRVSGDNIMMSPPF 415
+R TG+IL E +K+ P+P W G+ Y A + G L+R G + PP+
Sbjct: 371 VRQTGMILAIEMVQDKASKTPYP--WQERRGLKVYQHAL--ERGALLRPLGSVVYFLPPY 426
Query: 416 IMSPEEVDEL 425
+++PE++D L
Sbjct: 427 VITPEQIDFL 436
>gnl|CDD|235656 PRK05964, PRK05964, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 423
Score = 239 bits (613), Expect = 1e-74
Identities = 115/429 (26%), Positives = 211/429 (49%), Gaps = 40/429 (9%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP------FYH 69
P+ I ++EG+Y+Y +G++ +D+++ W G + P + A QL+ L F H
Sbjct: 25 PIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTH 84
Query: 70 SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 129
+P+ LA+ L+ + T + VFF++SGS A + +K+ Y G P + +
Sbjct: 85 -------EPAERLAQRLVAL-TPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSR 136
Query: 130 FIARQKSYHGSTLIAASLSGLPALHQKFD--LPAPFVLHTDCPHYWRYAHPGETEEEYST 187
F++ + YHG T+ S+ +H + L + P P E+
Sbjct: 137 FLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFE--QVTAPFP-------PDGYEQATLD 187
Query: 188 RLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYDILFIADEV 246
L E L+ K E IAAFI EP++ GAGG++ Y +++ + ++ +L I DE+
Sbjct: 188 AL----EALLEKHAGE-IAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEI 242
Query: 247 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 306
FGR GT+F C++ + PD++ +K L+ Y+P+ A L + E+ E +S +F
Sbjct: 243 ATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRA-KAFM 301
Query: 307 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 366
H +Y+ +P++CA A +L ++++ ++E+V ++ +G++ F D P + ++R G I
Sbjct: 302 HSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAI 361
Query: 367 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELI 426
E P G A + G+L+R G+ I + PP+I++ EE+D +
Sbjct: 362 GAVELDR--------PVLERDGPALRAFALERGVLLRPLGNTIYLMPPYIITAEELDRIT 413
Query: 427 SKYGKALKA 435
+
Sbjct: 414 DAIVEVADE 422
>gnl|CDD|181234 PRK08117, PRK08117, 4-aminobutyrate aminotransferase; Provisional.
Length = 433
Score = 234 bits (600), Expect = 1e-72
Identities = 139/447 (31%), Positives = 221/447 (49%), Gaps = 59/447 (13%)
Query: 15 HP-LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN 73
HP L + K EG Y Y V+GK+YLD +G+ +G P++V A Q + L H
Sbjct: 24 HPNLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKL--MHGPSG 81
Query: 74 RTTKPS-LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 132
S L LA+EL E+ T + FF+NSG+EA + +KL + RP I+
Sbjct: 82 VIYYESILKLAEELAEI-TPGGLDCFFFSNSGAEAIEGALKLAKHVT---KRPY---IIS 134
Query: 133 RQKSYHGSTLIAASLSGLPALHQKFDLP-------APFVLHTDCPHYWRYAHPGETEEEY 185
+HG TL A S++ + ++K+ P AP+ CP GE E
Sbjct: 135 FTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPK-------GEDPEVC 187
Query: 186 STRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 244
+LE L + PE +AA I EPV+G GG I PP ++ +K++ + ++ IL I D
Sbjct: 188 FLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFD 247
Query: 245 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 304
EV FGR G F + + PD+++ AK ++S +P+ A++ S E+ E LG
Sbjct: 248 EVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIASG-LPLSAVVASKELMEQWP-----LG- 300
Query: 305 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGT 363
SHG T+ G+PV+CA A+ L++ KE +++ N++ + ++ + P+IG++RG
Sbjct: 301 -SHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGI 359
Query: 364 GLILGTEFAD-NKSPNEPFPPEWGIGAYFGAQCEK-------HGMLVR---VSGDNIMMS 412
GL++G E D + P+ G EK G+L +G+ + M
Sbjct: 360 GLMIGIEIVDPDGEPD-------------GDAVEKILDKCLEKGLLFYLCGNAGNVLRMI 406
Query: 413 PPFIMSPEEVDELISKYGKALKATEER 439
PP ++ EE+DE + +AL E +
Sbjct: 407 PPLTVTKEEIDEGLDILDEALTEYEAK 433
>gnl|CDD|130940 TIGR01885, Orn_aminotrans, ornithine aminotransferase. This model
describes the final step in the biosynthesis of
ornithine from glutamate via the non-acetylated pathway.
Ornithine amino transferase takes L-glutamate
5-semialdehyde and makes it into ornithine, which is
used in the urea cycle, as well as in the biosynthesis
of arginine. This model includes low-GC bacteria and
eukaryotic species. The genes from two species are
annotated as putative acetylornithine aminotransferases
- one from Porphyromonas gingivalis (OMNI|PG1271), and
the other from Staphylococcus aureus (OMNI|SA0170).
After homology searching using BLAST it was determined
that these two sequences were most closely related to
ornithine aminotransferases. This model's seed includes
one characterized hit, from Bacillus subtilis
(SP|P38021).
Length = 401
Score = 223 bits (570), Expect = 1e-68
Identities = 136/432 (31%), Positives = 211/432 (48%), Gaps = 59/432 (13%)
Query: 15 HPL--VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSF 71
HPL V K+EG +V+DV GK+YLD L+ G P++V A T Q L +F
Sbjct: 17 HPLPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAF 76
Query: 72 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRP-NKK 128
+N A+ + ++F K V N+G+EA +T +KL W Y G P N+
Sbjct: 77 YNDVFGE---FAEYVTKLFGYDK---VLPMNTGAEAVETAIKLARKWGYK-VKGIPENQA 129
Query: 129 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 188
++ + ++HG TL A S+S P F P+V PG + Y
Sbjct: 130 IIVSAKGNFHGRTLGAISMSTDPDSRTNF---GPYV-------------PGFKKIPY--- 170
Query: 189 LANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 246
NNLE L L++ + AFI EP+ G GV+ P Y +KV+ + K+++L IADE+
Sbjct: 171 --NNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEI 228
Query: 247 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 306
GR G + D ++KPD+V KALS P+ A+L +V I
Sbjct: 229 QTGLGRTGKLLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKPG-------E 281
Query: 307 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 366
HG TY G+P++CAVA+ AL++ +E + E K+ F+D +K PII E+RG GL+
Sbjct: 282 HGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLP-KPIITEVRGRGLL 340
Query: 367 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEK---HGMLVRVSGDNIM-MSPPFIMSPEEV 422
++K+ W + C K G+L + + NI+ ++PP +++ E++
Sbjct: 341 NAIVIDESKTGRTA----WDL-------CLKLKEKGLLAKPTHGNIIRLAPPLVITEEQL 389
Query: 423 DELISKYGKALK 434
DE + K +
Sbjct: 390 DEGLEIIKKVID 401
>gnl|CDD|235112 PRK03244, argD, acetylornithine aminotransferase; Provisional.
Length = 398
Score = 220 bits (562), Expect = 2e-67
Identities = 128/424 (30%), Positives = 195/424 (45%), Gaps = 53/424 (12%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
PL + + EG+ V+DV+GK+YLD L G+ ALG + P +V A T QL TL + +
Sbjct: 26 PLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLF--A 83
Query: 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 135
T+P + LA+ L+E+ A + +VFF NSG+EAN+ KL GR K +A +
Sbjct: 84 TEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLA----RLTGRT---KIVAAEG 136
Query: 136 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 195
+HG T+ A +L+G PA F P G Y A L
Sbjct: 137 GFHGRTMGALALTGQPAKRAPF---EPLP-------------GGVEHVPYGDVDA--LAA 178
Query: 196 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 255
+ + AA EP+ G GV+PPPA Y + + ++ L + DEV GR G
Sbjct: 179 AV----DDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGA 234
Query: 256 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 315
F + PD+V+ AK L +PIGA L +++ L HG T+ G+P
Sbjct: 235 WFAHQHDGVTPDVVTLAKGLGGG-LPIGACLAFGPAADL-------LTPGLHGSTFGGNP 286
Query: 316 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNK 375
V+CA A+ L ++E ++ + + G++A P++ +RG GL+LG
Sbjct: 287 VACAAALAVLDTIASEGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVL---- 341
Query: 376 SPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELISKYGKALK 434
P A + G LV V+ D I ++PP I++ +VD ++ L
Sbjct: 342 --TAPVAKA------VEAAAREAGFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPAILD 393
Query: 435 ATEE 438
A
Sbjct: 394 AAAA 397
>gnl|CDD|179270 PRK01278, argD, acetylornithine transaminase protein; Provisional.
Length = 389
Score = 212 bits (542), Expect = 1e-64
Identities = 115/427 (26%), Positives = 194/427 (45%), Gaps = 59/427 (13%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW--- 72
L E+ EG ++ D +G++YLD +G+ +LG + P LV A Q L W
Sbjct: 14 DLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKL------WHVS 67
Query: 73 NRTTKPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 131
N P + L E + A KVFFTNSG+EA + +K Y+ G P + + I
Sbjct: 68 NLYRIPE---QERLAERLVENSFADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRII 124
Query: 132 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191
+ ++HG TL + G + F P V PG + +
Sbjct: 125 TFEGAFHGRTLATIAAGGQEKYLEGF---GPLV-------------PGFDQVPF-----G 163
Query: 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 251
++E L P T AA + EP+ G GG+ P P + + ++ + + +L I DEV C G
Sbjct: 164 DIEALKAAITPNT-AAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMG 222
Query: 252 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 311
R G +F + + PD+++ AK + + P+GA L + E ++ + T G +HG TY
Sbjct: 223 RTGKLFAHEWAGVTPDIMAVAKGIGGGF-PLGACLATEEAAKGM-----TPG--THGSTY 274
Query: 312 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD--SPIIGEIRGTGLILGT 369
G+P++ AV L + ++ V ++ + ++ D +I E+RG GL+LG
Sbjct: 275 GGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGL 334
Query: 370 EFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISK 428
+ G+L +GDN++ + PP I++ EE+DE + +
Sbjct: 335 KCVVPNRD-------------LVQALRDEGLLTVGAGDNVVRLLPPLIITEEEIDEALER 381
Query: 429 YGKALKA 435
+A ++
Sbjct: 382 LERAAES 388
>gnl|CDD|236336 PRK08742, PRK08742, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 472
Score = 209 bits (532), Expect = 2e-62
Identities = 115/437 (26%), Positives = 219/437 (50%), Gaps = 28/437 (6%)
Query: 4 PFTAGWQSTDVHPLV-IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQL 62
P T + PLV I + EG+++ +G++YLD+++ W G +EPR+ AA AQ
Sbjct: 34 PCTQMREHPHTLPLVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQA 93
Query: 63 NTLP------FYHSFWNRTTKPSLDLAKELLEMFTA----SKMAKVFFTNSGSEANDTQV 112
L F H P++ LA++LL + + ++KVF+ ++GS + +
Sbjct: 94 GELEQVMLAGFTHE-------PAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVAL 146
Query: 113 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLH---TDC 169
K+ ++Y + G + +FIA + YHG T+ A ++ +P + + AP +L
Sbjct: 147 KMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVY---APLLLESLFAPS 203
Query: 170 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIG-AGGVIPPPATYFE 228
P + A PG++ E+Y+ + A+ L+ L ++ P I A I EP + AGG+ Y
Sbjct: 204 PDAY-LAEPGQSAEDYALQAADALQAL-FEQSPGEICALILEPRLQCAGGMRMHHPAYLR 261
Query: 229 KVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVS 288
+ + + + IADE+ FGR GT+F C++ + PDL+ +K L+ ++P+ A+L +
Sbjct: 262 RARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLAT 321
Query: 289 PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV 348
++ + S +F H +Y+G+P++CA A+ L I+ + +++ + A +
Sbjct: 322 QQLYDAFLDDSRER-AFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQLA 380
Query: 349 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN 408
+ P + ++R G+++ E + PFPP +G + G+++R GD
Sbjct: 381 AQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLGDV 440
Query: 409 IMMSPPFIMSPEEVDEL 425
+ PP+ + ++ L
Sbjct: 441 LYWMPPYCVDEAQLALL 457
>gnl|CDD|181401 PRK08360, PRK08360, 4-aminobutyrate aminotransferase; Provisional.
Length = 443
Score = 205 bits (522), Expect = 4e-61
Identities = 120/432 (27%), Positives = 213/432 (49%), Gaps = 35/432 (8%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
PLV K+E + V+D+ G +Y+D L+ +G + PR+V A Q + L Y +
Sbjct: 24 PLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHY-TPIYGF 82
Query: 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 135
L LA++L+E+ KV F SGS+AND +K Y ++K ++ +
Sbjct: 83 PVEPLLLAEKLIEI-APGDNPKVSFGLSGSDANDGAIKFARAYTK------RRKILSYLR 135
Query: 136 SYHGSTLIAASLSGLPALHQKFDL-PAPFVLHTDCPHYWRY---AHPGETEEEYSTRLAN 191
SY+GST A SL+GL + + V + P +R PG + E +
Sbjct: 136 SYYGSTYGAMSLTGL-DFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKE 194
Query: 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 251
E + EG +AA AEP+ G G+I PP YF+K++ ++ ++ IL + DEV G
Sbjct: 195 KFEGEVYAEG---VAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLG 251
Query: 252 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 311
R G F + + ++PD+++ K L +PI A + E+ + +L +H FT
Sbjct: 252 RTGKWFAIEHFGVEPDIITLGKPLGGG-LPISATIGRAEIMD-------SLPPLAHAFTL 303
Query: 312 SGHPVSCAVAIEALKIYKERNIVEQVNKIA----PKFQDGVKAFSDSPIIGEIRGTGLIL 367
SG+PV+ A A+ ++ +E+N++++ K+ + ++ K +IG++RG GL++
Sbjct: 304 SGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKH---ELIGDVRGIGLMI 360
Query: 368 GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELI 426
G + ++ E E + + + G++V SG+ + + PP + E +DE +
Sbjct: 361 GVDLVKDRETKERAYEEAAKVVW---RAWELGLIVTFFSGNVLRIQPPLTIEKEVLDEGL 417
Query: 427 SKYGKALKATEE 438
+A++ EE
Sbjct: 418 DILEEAIEDVEE 429
>gnl|CDD|183175 PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase;
Provisional.
Length = 459
Score = 203 bits (518), Expect = 2e-60
Identities = 122/428 (28%), Positives = 196/428 (45%), Gaps = 53/428 (12%)
Query: 25 SYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLD--- 81
+ + D G++++D L G +G P +V+A QL P + ++ LD
Sbjct: 74 NTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLH-------SQELLDPLR 126
Query: 82 --LAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHG 139
LAK L + T K+ FF NSG+E+ + +KL Y + G K FIA ++HG
Sbjct: 127 AMLAKTLAAL-TPGKLKYSFFCNSGTESVEAALKLAKAYQSPRG---KFTFIATSGAFHG 182
Query: 140 STLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK 199
+L A S + + F P H P E T L+ K
Sbjct: 183 KSLGALSATAKSTFRKPFMPLLPGFRHV----------PFGNIEAMRTALSE------CK 226
Query: 200 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC 259
+ + +AA I EP+ G GGVI PP Y V+ + ++ L I DEV GR G MF C
Sbjct: 227 KTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFAC 286
Query: 260 DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 319
+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA
Sbjct: 287 EHENVQPDILCLAKALGGGVMPIGATIATEEVFSVL-----FDNPFLHTTTFGGNPLACA 341
Query: 320 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKSP 377
A+ + + E+N+ Q + DG + + ++ E RG G+++ EF DN+
Sbjct: 342 AALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE-- 399
Query: 378 NEPFPPEWGIGAYFGAQCEKHGMLVR---VSGDNIMMSPPFIMSPEEVDELISKYGKALK 434
IG F ++ + +LV + I + PP ++ E+ ++++ KAL
Sbjct: 400 ---------IGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALA 450
Query: 435 ATEERVKE 442
A V+E
Sbjct: 451 AMRVSVEE 458
>gnl|CDD|179505 PRK02936, argD, acetylornithine aminotransferase; Provisional.
Length = 377
Score = 199 bits (508), Expect = 9e-60
Identities = 121/421 (28%), Positives = 199/421 (47%), Gaps = 58/421 (13%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
P+ I K +G+ V D NGK YLD +G+ LG P + A QL+ W+ +
Sbjct: 12 PIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLD------DIWHVS 65
Query: 76 TKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 134
+ L +E+ + S VFF NSG+EAN+ +KL + K K + +
Sbjct: 66 NLFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHT------GKSKIVTFE 119
Query: 135 KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE 194
+S+HG T S +G + + F P + PG T + N+++
Sbjct: 120 QSFHGRTFGTMSATGQEKIKEGF---GPLL-------------PGFTHVPF-----NDIK 158
Query: 195 DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 254
L + E +AA + E V G GGVIP + ++VQ + KK+ L I DEV GR G
Sbjct: 159 AL-KEVMNEEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG 217
Query: 255 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 314
T+F +++ + PD+V+ AK L + +P+GA++ E+ G SHG T+ G+
Sbjct: 218 TLFAYEQFGLDPDIVTVAKGLGNG-IPVGAMIGKKELGT-------AFGPGSHGSTFGGN 269
Query: 315 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGTEFAD 373
P++ A A E L++ K+ + +E+V + F ++ + IRG GL++G E +
Sbjct: 270 PLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTE 329
Query: 374 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKYGKA 432
+P Q + G+LV +G N I + PP +++ EE+D+ + K
Sbjct: 330 EVAP-------------VIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKV 376
Query: 433 L 433
L
Sbjct: 377 L 377
>gnl|CDD|179933 PRK05093, argD, bifunctional
N-succinyldiaminopimelate-
aminotransferase/acetylornithine transaminase protein;
Reviewed.
Length = 403
Score = 197 bits (503), Expect = 9e-59
Identities = 130/423 (30%), Positives = 204/423 (48%), Gaps = 52/423 (12%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
+ + EGS V+D GK+Y+D G+ TALG P LV A Q L +H T
Sbjct: 23 EFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKL--WHISNVFT 80
Query: 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR--PNKKKFIAR 133
+P+L LAK+L++ A + VFF NSG+EAN+ KL Y A R P K + IA
Sbjct: 81 NEPALRLAKKLIDATFAER---VFFANSGAEANEAAFKLARRY--ACDRHGPEKTEIIAF 135
Query: 134 QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 193
S+HG TL S+ G P F P P T + N+L
Sbjct: 136 HNSFHGRTLFTVSVGGQPKYSDGFG-PKP---------------ADITHVPF-----NDL 174
Query: 194 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 253
+ T A + EP+ G GGVIP + + ++ + +++ L I DEV GR
Sbjct: 175 AAVKAVIDDHT-CAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRT 233
Query: 254 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG 313
G +F Y + PD+++ AKAL + PIGA+L + E++ +G +HG TY G
Sbjct: 234 GDLFAYMHYGVTPDILTSAKALGGGF-PIGAMLTTAEIASHFK-----VG--THGSTYGG 285
Query: 314 HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFA 372
+P++CAVA I ++E V +F DG++ + + EIRG GL++G E
Sbjct: 286 NPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELK 345
Query: 373 DNKSPNEPFPPEW-GIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYG 430
P++ G F + G++V V+G +++ +P ++ ++DE ++++
Sbjct: 346 ----------PQYKGRARDFLNAAAEEGVMVLVAGPDVLRFAPSLVIEEADIDEGLARFE 395
Query: 431 KAL 433
KA+
Sbjct: 396 KAV 398
>gnl|CDD|132290 TIGR03246, arg_catab_astC, succinylornithine transaminase family.
Members of the seed alignment for this protein family
are the enzyme succinylornithine transaminase (EC
2.6.1.81), which catalyzes the third of five steps in
arginine succinyltransferase (AST) pathway, an
ammonia-releasing pathway of arginine degradation. All
seed alignment sequences are found within arginine
succinyltransferase operons, and all proteins that score
above 820.0 bits should function as succinylornithine
transaminase. However, a number of sequences extremely
closely related in sequence, found in different genomic
contexts, are likely to act in different biological
processes and may act on different substrates. This
model is desigated subfamily rather than equivalog,
pending further consideration, for this reason [Energy
metabolism, Amino acids and amines].
Length = 397
Score = 193 bits (492), Expect = 3e-57
Identities = 124/421 (29%), Positives = 206/421 (48%), Gaps = 48/421 (11%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
P + + EGS V+D GK+Y+D G+ ALG + P LV A Q + L +H T
Sbjct: 18 PFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKL--WHIGNGYT 75
Query: 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 135
+P L LAK+L++ A K VFF NSG+EAN+ +KL Y +K + +A +
Sbjct: 76 NEPVLRLAKKLVDATFADK---VFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKN 132
Query: 136 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 195
S+HG TL S+ G P Q F P P G Y N+L
Sbjct: 133 SFHGRTLFTVSVGGQPKYSQGFA-PLP---------------GGIKHAPY-----NDLAA 171
Query: 196 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 255
+T A I EP+ G GGV+P + + ++ + +++ L I DEV GR G
Sbjct: 172 AKALISDKT-CAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGE 230
Query: 256 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 315
++ Y + PD+++ AKAL + PIGA+L + E++ + +G +HG TY G+P
Sbjct: 231 LYAYMHYGVTPDILTSAKALGGGF-PIGAMLTTTEIAAHL-----KVG--THGTTYGGNP 282
Query: 316 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFADN 374
++CAVA + L + ++ V + F DG++ + + EIRG GL++G
Sbjct: 283 LACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLT-- 340
Query: 375 KSPNEPFPPEW-GIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYGKA 432
+ G F + G++ ++G N++ +P ++S +++DE ++++ +A
Sbjct: 341 --------EAYQGKAKQFVNAAAEEGVIALIAGPNVVRFAPSLVISDDDIDEGLARFERA 392
Query: 433 L 433
+
Sbjct: 393 I 393
>gnl|CDD|181493 PRK08593, PRK08593, 4-aminobutyrate aminotransferase; Provisional.
Length = 445
Score = 192 bits (491), Expect = 2e-56
Identities = 121/443 (27%), Positives = 212/443 (47%), Gaps = 42/443 (9%)
Query: 15 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL----P--FY 68
+PLVI+ G+ + DV+GK Y+D LA +G + PR+V A AQ + P Y
Sbjct: 24 YPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMY 83
Query: 69 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 128
H P + LAK+L E+ +V F SGS+AND +K Y GRP
Sbjct: 84 HE-------PLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYT---GRPY-- 131
Query: 129 KFIARQKSYHGSTLIAASLSGLPA-LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187
I+ +YHGST + S+SG+ + +K+ P +H P +R E + +
Sbjct: 132 -IISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGM-YEEPDANFVE 189
Query: 188 RLANNLEDLILKEGP-ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 246
L+++ K P + +A + E + G GG++ P YFE + +++ ILF D++
Sbjct: 190 EYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDI 249
Query: 247 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 306
GR G ++I PDL+SF K+L+ MP+ AI+ E+ E +L + +
Sbjct: 250 QQGLGRTGKWSSISHFNITPDLMSFGKSLAGG-MPMSAIVGRKEIME-------SLEAPA 301
Query: 307 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGL 365
H FT +PVSCA A+ + + ++ +++++ + + + S +G++RG GL
Sbjct: 302 HLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGL 361
Query: 366 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG-MLVRVSGDNIMMSPPFIMSPEEVDE 424
+G + +K + C +HG +++ V+G+ + PP +++ E++D
Sbjct: 362 SIGIDIVSDKKLKTRDNEAALKICNY---CFEHGVVIIAVAGNVLRFQPPLVITYEQLD- 417
Query: 425 LISKYGKALKATEERVKELKSQQ 447
AL E+ L++ +
Sbjct: 418 ------TALNTIEQAFTALEAGK 434
>gnl|CDD|235894 PRK06943, PRK06943, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 453
Score = 189 bits (481), Expect = 4e-55
Identities = 109/426 (25%), Positives = 202/426 (47%), Gaps = 20/426 (4%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
L + + EG+++YD +G++YLD+++ W G + PR+ AA QL+TL H+
Sbjct: 37 LLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLE--HAMLAGC 94
Query: 76 T-KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 134
T +P+++LA E L T + FF + G+ A + +K+ ++ GR +K++F+
Sbjct: 95 THEPAIELA-ERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLA 153
Query: 135 KSYHGSTLIAASLSGLPALHQKFD---LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191
YHG T+ A ++ + +D A V D R A PGET + + R
Sbjct: 154 NGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDA----RGARPGETAADVAARALA 209
Query: 192 NLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250
++ L E IAA I EP V A G+ +Y ++A+ +Y + IADE+
Sbjct: 210 DVRRL-FAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGC 268
Query: 251 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 310
GR GT F C++ + PD + +K +S Y+P+ +L + + + F H +
Sbjct: 269 GRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYD-DDVTRGFLHSHS 327
Query: 311 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE 370
Y+G+P++C A+ L ++ E +++ + + + + + + + P + +R G I +
Sbjct: 328 YTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFD 387
Query: 371 FADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYG 430
A + F F + +L+R G + + PP+++ +E+ L +
Sbjct: 388 VALDGDAARTFS------RRFFEAALERELLLRPIGTTVYLMPPYVLDDDEIAWLAERTR 441
Query: 431 KALKAT 436
L AT
Sbjct: 442 ATLDAT 447
>gnl|CDD|215335 PLN02624, PLN02624, ornithine-delta-aminotransferase.
Length = 474
Score = 188 bits (480), Expect = 1e-54
Identities = 116/440 (26%), Positives = 205/440 (46%), Gaps = 54/440 (12%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWNR 74
P+V +++GS ++D GKKYLD L+ G P+++ A T Q L +F+N
Sbjct: 58 PVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYND 117
Query: 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRPNKKKFIA 132
+ A+ L MF + + N+G+E +T +KL W Y N+ ++
Sbjct: 118 KFP---EFAEYLTSMFGYDMVLPM---NTGAEGVETAIKLARKWGYEKKGIPKNEAIIVS 171
Query: 133 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 192
+HG TL A S+S + F P + PG + ++ +
Sbjct: 172 CCGCFHGRTLAAISMSCDNEATRGF---GPLL-------------PGHLKVDF-----GD 210
Query: 193 LEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250
L+ L I +E + IAAF+ EP+ G GV+ PP Y + V+ + K+++L IADE+
Sbjct: 211 LDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGL 270
Query: 251 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 310
R G M CD ++PD+V KAL +P+ A+L +V + HG T
Sbjct: 271 ARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVML-------CIKPGEHGST 323
Query: 311 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD--SPIIGEIRGTGLILG 368
+ G+P++ AVA+ AL++ ++ + E+ K+ + +D ++ +I E+RG GL+
Sbjct: 324 FGGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNA 383
Query: 369 TEFADNKSPNEPFPPEWGIGAY-FGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELI 426
++ + AY + ++ G+L + + D I+ ++PP +S +E+ E
Sbjct: 384 VVL-NSPKLG-------PVSAYDVCLKLKERGLLAKPTHDTIIRLAPPLSISEDELQECS 435
Query: 427 SKYGKALKATEERVKELKSQ 446
L E + +L+S
Sbjct: 436 KALSDVL---EHDLPKLQSA 452
>gnl|CDD|179868 PRK04612, argD, acetylornithine transaminase protein; Provisional.
Length = 408
Score = 186 bits (473), Expect = 2e-54
Identities = 132/424 (31%), Positives = 216/424 (50%), Gaps = 49/424 (11%)
Query: 17 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT 76
+V+E+ +GS V+D G++YLD AG+ LG ++P LVAA T Q L +H+ +
Sbjct: 24 VVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKL--WHTSNVFYS 81
Query: 77 KPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR-Q 134
P L LA+EL+ AS+ A KVF NSG+EAN+ +KLV + ++ GRP K+ I +
Sbjct: 82 APPLKLAEELVT---ASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFR 138
Query: 135 KSYHGSTLIAASLSGLPALHQKFD-LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 193
S+HG TL A + + P + ++ LP F RY N++
Sbjct: 139 GSFHGRTLAAVTATAQPKYQEGYEPLPGGF----------RYVD------------FNDV 176
Query: 194 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 253
E L +AA + EP+ G GGV+P + +V+A+ ++D L + DE+ C GR
Sbjct: 177 EALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRT 236
Query: 254 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG 313
GT+F + + PD+V+ AKAL + PIGA+L P+V+E + G +HG T+ G
Sbjct: 237 GTLFAHWQEQVTPDIVTLAKALGGGF-PIGAMLAGPKVAETMQ-----FG--AHGTTFGG 288
Query: 314 HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFA 372
+P++ AVA AL+ I V + + + G++A + + ++RG GL+LG A
Sbjct: 289 NPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLA 348
Query: 373 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYGK 431
P G +HG+L+ +G +++ P ++ E+ + +++
Sbjct: 349 ---------PAHAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLARLRL 399
Query: 432 ALKA 435
AL
Sbjct: 400 ALAD 403
>gnl|CDD|180174 PRK05630, PRK05630, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 422
Score = 186 bits (473), Expect = 3e-54
Identities = 124/438 (28%), Positives = 214/438 (48%), Gaps = 44/438 (10%)
Query: 9 WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY 68
+ + V ++ ++G ++ +G +D+++ W A G PRL AAA Q++T+ +
Sbjct: 16 YAAPGVRNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMS-H 74
Query: 69 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 128
F T +P++ L ++LL + T + + VF+++SGS + + +K+ Y+ G P +
Sbjct: 75 VMFGGLTHEPAIKLTRKLLNL-TDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERT 133
Query: 129 KFIARQKSYHGSTLIAASL----SGLPAL------HQKFDLPAPFVLHTDCPHYWRYAHP 178
+ + + YHG T A S+ G+ +L Q F PAP V R + P
Sbjct: 134 RLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIF-APAPPV---------RGSSP 183
Query: 179 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKY 237
E +LE LI ET+AA I EP++ GAGG+ E V+ + K+
Sbjct: 184 QEIS-----EYLRSLELLI----DETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKH 234
Query: 238 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHS 297
DIL IADE+ FGR G +F + PD++ KAL+ +M A L + +V+++I S
Sbjct: 235 DILLIADEIATGFGRTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLI-S 293
Query: 298 QSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPII 357
N G+ HG T+ +P++CAVA +L+I + +QV +I + G+ + P +
Sbjct: 294 TPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAHLPGV 353
Query: 358 GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIM 417
++R G I E +P E A HG+ +R G + + PP+I
Sbjct: 354 ADVRVLGAIGVVEME------QPVDMEEATQAAV-----DHGVWLRPFGRLVYVMPPYIT 402
Query: 418 SPEEVDELISKYGKALKA 435
+ E++ ++ + A+KA
Sbjct: 403 TSEQIAQICAALAAAVKA 420
>gnl|CDD|179736 PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional.
Length = 396
Score = 181 bits (460), Expect = 2e-52
Identities = 125/432 (28%), Positives = 202/432 (46%), Gaps = 67/432 (15%)
Query: 15 HPL--VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSF 71
HPL VI ++EG +V D G +Y+D L+ G P+++ A Q + + +F
Sbjct: 20 HPLPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAF 79
Query: 72 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRPNKKK 129
+ P + +L + V N+G+EA +T +K W Y+ PNK +
Sbjct: 80 HSDQLGPWYEKVAKL------TGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAE 133
Query: 130 FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 189
IA + ++HG T+ A SLS + F P + PG + Y
Sbjct: 134 IIACEGNFHGRTMAAVSLSSEEEYKRGF---GPML-------------PGIKKIPYG--- 174
Query: 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 249
+LE L P T AAF+ EP+ G G+ PP + + + + K+ ++LFIADE+
Sbjct: 175 --DLEALKAAITPNT-AAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTG 231
Query: 250 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF---S 306
GR G +F CD ++ PD+ KAL PI + + ++ LG F S
Sbjct: 232 LGRTGKLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDI----------LGVFTPGS 281
Query: 307 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 366
HG T+ G+P++CAV+I AL++ +E + E+ ++ F++ +K D+P+I E+RG GL
Sbjct: 282 HGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEI-DNPMIKEVRGRGLF 340
Query: 367 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEK---HGMLVRVSGDN-IMMSPPFIMSPEEV 422
+G E NEP P CE G+L + + + I +PP +++ EE+
Sbjct: 341 IGVEL------NEPARP----------YCEALKEEGLLCKETHETVIRFAPPLVITKEEL 384
Query: 423 DELISKYGKALK 434
D K L
Sbjct: 385 DWAFEKIKAVLS 396
>gnl|CDD|183486 PRK12381, PRK12381, bifunctional succinylornithine
transaminase/acetylornithine transaminase; Provisional.
Length = 406
Score = 178 bits (454), Expect = 2e-51
Identities = 129/435 (29%), Positives = 210/435 (48%), Gaps = 74/435 (17%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
P + + EGS ++D GK+Y+D G+ ALG + P L A Q + F+H+ T
Sbjct: 22 PFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASK--FWHTGNGYT 79
Query: 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 135
+P L LAK+L++ A+ +VFF NSG+EAN+ +KL Y + +K +A +
Sbjct: 80 NEPVLRLAKKLID---ATFADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKN 136
Query: 136 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE- 194
++HG TL S G P Q F P P P Y N+L
Sbjct: 137 AFHGRTLFTVSAGGQPKYSQDF-APLP---------------PDIRHAAY-----NDLNS 175
Query: 195 --DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 252
LI + A I EP+ G GGVIP + + ++ + +++ L I DEV GR
Sbjct: 176 ASALI----DDQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGR 231
Query: 253 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 312
G ++ Y + PD+++ AKAL + PIGA+L + + + V+ T+G +HG TY
Sbjct: 232 TGELYAYMHYGVTPDVLTTAKALGGGF-PIGAMLTTEKCASVM-----TVG--THGTTYG 283
Query: 313 GHPVSCAVAIEALKI---------YKERN--IVEQVNKIAPKFQDGVKAFSDSPIIGEIR 361
G+P++ AVA + L++ K+R+ VE++N I ++ FS EIR
Sbjct: 284 GNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINARYG----LFS------EIR 333
Query: 362 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVSGDNIM-MSPPFIMSP 419
G GL++G E+ A +Q K G++V ++G N++ +P +S
Sbjct: 334 GLGLLIGCVLN----------AEYAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISE 383
Query: 420 EEVDELISKYGKALK 434
EE+ + ++ +A +
Sbjct: 384 EEITTGLDRFARACE 398
>gnl|CDD|177748 PLN00144, PLN00144, acetylornithine transaminase.
Length = 382
Score = 176 bits (447), Expect = 8e-51
Identities = 124/434 (28%), Positives = 191/434 (44%), Gaps = 71/434 (16%)
Query: 19 IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP----FYHSFWNR 74
+G +YDV GK+YLD AG+ ALG +P V A Q TL YH
Sbjct: 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYH----- 55
Query: 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK----- 129
T P ++LAK L+ A + VFF NSG+EAN+ +K Y K
Sbjct: 56 -TIPQVELAKRLVASSFADR---VFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSA 111
Query: 130 --FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187
F++ S+HG TL A +L+ F P + PG T EY
Sbjct: 112 TEFVSFSNSFHGRTLGALALTSKEQYRTPF---EPLM-------------PGVTFVEY-- 153
Query: 188 RLANNLE---DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 244
NLE LI K AA EPV G GG+ P + + ++A+ + L + D
Sbjct: 154 ---GNLEAARKLIQKG---KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFD 207
Query: 245 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 304
EV C GR G ++ + Y ++PD+++ AK L+ +PIGA+LV+ +V+ I+
Sbjct: 208 EVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLAGG-LPIGAVLVTEKVASAINPG------ 260
Query: 305 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGT 363
HG T++G P+ C A+ L + + V K ++ ++ +P + E+RG
Sbjct: 261 -DHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGV 319
Query: 364 GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--GDNIMMSPPFIMSPEE 421
GL++G + P C G+LV + GD + + PP ++S E
Sbjct: 320 GLLVGIQLDVPAGP-------------LVDACRDSGLLVLTAGKGDVVRLVPPLVISEAE 366
Query: 422 VDELISKYGKALKA 435
+++ + L A
Sbjct: 367 LEQAVEILADCLPA 380
>gnl|CDD|129783 TIGR00700, GABAtrnsam, 4-aminobutyrate aminotransferase,
prokaryotic type. This enzyme is a class III
pyridoxal-phosphate-dependent aminotransferase. This
model describes known bacterial examples of the enzyme.
The best archaeal matches are presumed but not trusted
to have the equivalent function. The degree of sequence
difference between this set and known eukaryotic
(mitochondrial) examples is greater than the distance to
some proteins known to have different functions, and so
separate models are built for prokaryotic and eukaryotic
sets. E. coli has two isozymes. Alternate names include
GABA transaminase, gamma-amino-N-butyrate transaminase,
and beta-alanine--oxoglutarate aminotransferase [Central
intermediary metabolism, Other].
Length = 420
Score = 175 bits (446), Expect = 2e-50
Identities = 113/426 (26%), Positives = 190/426 (44%), Gaps = 27/426 (6%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
P+ ++EG+ + DV+G + +D +G+ +G S PR+V A Q+ F H+ + T
Sbjct: 16 PVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAE--FTHTCFMVT 73
Query: 76 TKPS-LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 134
+ LA++L + S K F NSG+EA + VK+ Y GRP +A
Sbjct: 74 PYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYT---GRPG---VVAFD 127
Query: 135 KSYHGSTLIAASLSGLPALHQ-KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 193
+HG T + +L+ ++ F AP V P+ +R + + LA
Sbjct: 128 HGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYR-DGLLDKQLSTDGELAAAR 186
Query: 194 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 253
++ G +AA + EPV G GG I P + + +++ I+FIADEV F R
Sbjct: 187 AIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFART 246
Query: 254 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG 313
G MF C+ +PDL++ AK+L+ +P+ + E+ + G G TY+G
Sbjct: 247 GAMFACEHEGPEPDLITTAKSLADG-LPLSGVTGRAEIMDAPAP-----GGL--GGTYAG 298
Query: 314 HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFA 372
+P++CA A+ L I + ++E+ +I D + P IG++RG G ++ E
Sbjct: 299 NPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELV 358
Query: 373 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPEEVDELISKY 429
D + P+ G+ G+L+ G I PP + E + E +
Sbjct: 359 DPGTTE----PDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDIL 414
Query: 430 GKALKA 435
L
Sbjct: 415 CAILAD 420
>gnl|CDD|180390 PRK06082, PRK06082, 4-aminobutyrate aminotransferase; Provisional.
Length = 459
Score = 175 bits (446), Expect = 5e-50
Identities = 112/420 (26%), Positives = 197/420 (46%), Gaps = 27/420 (6%)
Query: 18 VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK 77
V+ +EG Y+ DV+GKKY+D G LG P ++ Q+ LPF S T +
Sbjct: 57 VLASAEGIYIEDVDGKKYMD-FHGNNVHQLGYGHPHVIEKVKEQMAKLPF--SPRRFTNE 113
Query: 78 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSY 137
+++ A++L E+ ++ +V F G+ A +KL + K ++ S+
Sbjct: 114 TAIECAEKLTEI-AGGELNRVLFAPGGTSAIGMALKLARHITG------NFKVVSLWDSF 166
Query: 138 HGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLI 197
HG++L A S+ G Q V P Y + A+ LE +I
Sbjct: 167 HGASLDAISVGGEACFRQGMGPLMAGVERI--PPAVSYRGAFPDADGSDVHYADYLEYVI 224
Query: 198 LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF 257
KEG I AFIAE V +P A Y+++V+ + K+++L I DE+ GR G F
Sbjct: 225 EKEG--GIGAFIAEAVRNTDVQVPSKA-YWKRVREICDKHNVLLIIDEIPNGMGRTGEWF 281
Query: 258 GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS 317
Y I+PD++ K L +PI A++ + + + +LG ++H P+
Sbjct: 282 THQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNT---AAQISLGHYTH----EKSPLG 334
Query: 318 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFADNKS 376
CA A+ +++ ++ ++E+V + ++ + P+IG++RG GL+ G E ++
Sbjct: 335 CAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRH 394
Query: 377 PNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKYGKALKA 435
E E Y +C +G+ +VS N I +SPP I++ EE+ + ++ +A+
Sbjct: 395 TKERAYDEAEAVLY---RCLNNGLSFKVSQGNVIQLSPPLIITREELTQALAILEEAIAK 451
>gnl|CDD|180441 PRK06173, PRK06173, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 429
Score = 174 bits (442), Expect = 1e-49
Identities = 128/444 (28%), Positives = 219/444 (49%), Gaps = 49/444 (11%)
Query: 4 PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 63
P+++ V+P +E+++G + +G++ +D ++ W G + PRL AAAT QL
Sbjct: 17 PYSSVTDPIPVYP--VERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLA 74
Query: 64 TLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 123
+ + F T +P+++LA++LLE+ S + K+FF +SGS A + +K+ Y A G
Sbjct: 75 KMS-HIMFGGFTHEPAVELAQKLLEILPPS-LNKIFFADSGSVAVEVAMKMALQYQQAKG 132
Query: 124 RPNKKKFIARQKSYHGSTLIAASL------------SGLPALHQKFDLPAPFVLHTDCPH 171
+ KF + YHG T A S+ LP Q F LP P +
Sbjct: 133 EVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPV--QYF-LPQPSI------- 182
Query: 172 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKV 230
+ EE++ L+DL+ ++G E IAA I EPV+ GAGG+ TY K
Sbjct: 183 --------KFGEEWNDEAIEPLQDLLEQKGDE-IAALILEPVVQGAGGMYFYSPTYLVKA 233
Query: 231 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPE 290
+ + +Y +L I DE+ FGR G +F + + PD++ KAL+ Y+ + A + +
Sbjct: 234 RELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEA 293
Query: 291 VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 350
+++ I S F HG T+ +P++CA+A E++++ E + + +I + + +
Sbjct: 294 IAQTI--CSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAP 351
Query: 351 FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM 410
++ + E+R G I E K P + F +HG+ VR G +
Sbjct: 352 AAEFDSVAEVRVLGAIGVVEM---KEPVNMAT----LQPRF----VEHGIWVRPFGKLVY 400
Query: 411 MSPPFIMSPEEVDELISKYGKALK 434
+ PPFI+SP+E+ +L S + LK
Sbjct: 401 IMPPFIISPDELSQLTSGLLRVLK 424
>gnl|CDD|234848 PRK00854, rocD, ornithine--oxo-acid transaminase; Reviewed.
Length = 401
Score = 172 bits (438), Expect = 3e-49
Identities = 125/423 (29%), Positives = 192/423 (45%), Gaps = 52/423 (12%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWNR 74
+V+ + EG +V+D +G +YLD L+ G P+++AA Q L +F N
Sbjct: 24 DVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRN- 82
Query: 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRP-NKKKFI 131
L E L T S KV NSG+EA +T +K V W Y G P + + I
Sbjct: 83 ---DQLAPLYEELAALTGSH--KVLPMNSGAEAVETAIKAVRKWGYE-VKGVPEGQAEII 136
Query: 132 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 191
++HG TL S P F PF PG + A
Sbjct: 137 VCADNFHGRTLSIVGFSTDPDARGGF---GPFT-------------PGFRVVPFGD--AE 178
Query: 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 251
LE I P T+A F+ EP+ G GVI PPA YF +V+ + ++ I DE+ G
Sbjct: 179 ALEAAI---TPNTVA-FLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLG 234
Query: 252 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 311
R G + + I+ D+ KALS + P+ A+L + EV V+ HG T+
Sbjct: 235 RTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPG-------QHGSTF 287
Query: 312 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEF 371
G+P++CAVA ALK+ E ++E ++ F +G+++ S I+ E+RG GL+L E
Sbjct: 288 GGNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVEL 346
Query: 372 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELISKYG 430
PE G + ++ G+L + I ++PP +++ E+VD + +
Sbjct: 347 E----------PEAGGARQYCEALKERGLLAKDTHDHTIRLAPPLVITREQVDWALEQIA 396
Query: 431 KAL 433
K L
Sbjct: 397 KVL 399
>gnl|CDD|223080 COG0001, HemL, Glutamate-1-semialdehyde aminotransferase [Coenzyme
metabolism].
Length = 432
Score = 172 bits (439), Expect = 4e-49
Identities = 98/358 (27%), Positives = 160/358 (44%), Gaps = 65/358 (18%)
Query: 11 STDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS 70
S +P+ IE+ +G+Y+ DV+G +Y+D + G LG + P +V A QL +
Sbjct: 31 SVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSF-- 88
Query: 71 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 130
T+ ++LA+ L+E + KV F NSG+EA + ++L A + K
Sbjct: 89 --GAPTELEVELAELLIERV--PSIEKVRFVNSGTEATMSAIRL------ARAYTGRDKI 138
Query: 131 IARQKSYHGS-------------TLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAH 177
I + YHG TL + S G+PA K L P+
Sbjct: 139 IKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-------------- 184
Query: 178 PGETEEEYSTRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 235
N+LE L +E + IAA I EPV G GV+PP + E ++ + +
Sbjct: 185 -------------NDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTE 231
Query: 236 KYDILFIADEVICAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSE 293
++ L I DEVI F R+ G Y ++PDL + K + +PIGA E+ E
Sbjct: 232 EHGALLIFDEVITGF-RVA--LGGAQGYYGVEPDLTTLGKIIGGG-LPIGAFGGRAEIME 287
Query: 294 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK-IYKERNIVEQVNKIAPKFQDGVKA 350
+ LG T SG+P++ A + L+ + E + E+++ + + +G++A
Sbjct: 288 QL----APLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRA 341
>gnl|CDD|181189 PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Validated.
Length = 428
Score = 167 bits (424), Expect = 4e-47
Identities = 122/438 (27%), Positives = 216/438 (49%), Gaps = 38/438 (8%)
Query: 4 PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 63
P+T+ V+P + +EG + +G++ +D ++ W G + P+L AA +Q++
Sbjct: 16 PYTSMTSPLPVYP--VVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQID 73
Query: 64 TLPFYH-SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL 122
+ H F T P+++L ++L+ M T + VF +SGS A + +K+ Y A
Sbjct: 74 AMS--HVMFGGITHPPAIELCRKLVAM-TPQPLECVFLADSGSVAVEVAMKMALQYWQAK 130
Query: 123 GRPNKKKFIARQKSYHGSTLIAASLS----GLPALHQKFDLPAPFVLHTDCPHYWRYAHP 178
G P +++F+ + YHG T A S+ + +L++ + LP + + A
Sbjct: 131 GEP-RQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGY-LP---------ENLFAPAPQ 179
Query: 179 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKY 237
+ E+ R L+ E IAA I EP++ GAGG+ + ++V+ + +
Sbjct: 180 SRFDGEWDERDIAPFARLMAAHRHE-IAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDRE 238
Query: 238 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHS 297
IL IADE+ FGR G +F C+ I PD++ KAL+ M + A L + EV+E I
Sbjct: 239 GILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETI-- 296
Query: 298 QSN-TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPI 356
SN G F HG T+ G+P++CAVA +L + + + +QV I + ++ + D+P+
Sbjct: 297 -SNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPLRDAPM 355
Query: 357 IGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFI 416
+ ++R G I E P + +F Q G+ +R G I + PP+I
Sbjct: 356 VADVRVLGAIGVVET------TRPVNMA-ALQRFFVEQ----GVWIRPFGKLIYLMPPYI 404
Query: 417 MSPEEVDELISKYGKALK 434
+ PE++ L + +A++
Sbjct: 405 ILPEQLQRLTAAVNRAVQ 422
>gnl|CDD|132415 TIGR03372, putres_am_tran, putrescine aminotransferase. Members of
this family are putrescine aminotransferase, as found in
Escherichia coli, Erwinia carotovora subsp. atroseptica,
and closely related species. This pyridoxal phosphate
enzyme, as characterized in E. coli, can act also on
cadaverine and, more weakly, spermidine [Central
intermediary metabolism, Polyamine biosynthesis].
Length = 442
Score = 166 bits (422), Expect = 1e-46
Identities = 125/430 (29%), Positives = 188/430 (43%), Gaps = 53/430 (12%)
Query: 9 WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY 68
WQ+ ++ L+ D G +++D L G +G P ++AA QL P
Sbjct: 61 WQAGGLNTLI----------DTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPL- 109
Query: 69 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 128
HS P L + L T K+ FF NSG+E+ + +KL Y + G K
Sbjct: 110 HS--QELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRG---KF 164
Query: 129 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 188
FIA ++HG +L A S + PA + F P H E
Sbjct: 165 TFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHV----------AFGDIEAMLKA 214
Query: 189 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 248
L K+ + +AA I EP+ G GGVI PP Y V+A+ ++ L I DEV
Sbjct: 215 LNE------CKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT 268
Query: 249 AFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHG 308
GR G MF C+ ++PD++ AKAL MPIGA + + V V+ F H
Sbjct: 269 GMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFDN-----PFLHT 323
Query: 309 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-DSP-IIGEIRGTGLI 366
T+ G+P++CA A+ + E+N+ Q DG + + + P +I E RG GL+
Sbjct: 324 TTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLL 383
Query: 367 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPEEVD 423
+ EF DN+ IG F + + +LV + +N I + PP ++ E+
Sbjct: 384 MAIEFRDNE-----------IGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCA 432
Query: 424 ELISKYGKAL 433
+I AL
Sbjct: 433 LVIKAAKDAL 442
>gnl|CDD|235885 PRK06918, PRK06918, 4-aminobutyrate aminotransferase; Reviewed.
Length = 451
Score = 166 bits (422), Expect = 1e-46
Identities = 115/431 (26%), Positives = 212/431 (49%), Gaps = 27/431 (6%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
P + + G+ V DV+G +Y+D + +G S P++ A Q++ + H+ +N
Sbjct: 37 PTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQ--YIHTGFNVM 94
Query: 76 TKPS-LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 134
++LA++L + S KV F NSG+EA + VK+ Y ++ I+
Sbjct: 95 MYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTK------RQGIISFS 148
Query: 135 KSYHGSTLIAASL-SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 193
+ +HG TL+ ++ S + F AP V P+ +R G TEE+Y +
Sbjct: 149 RGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPE-GLTEEQYDDFMIEEF 207
Query: 194 EDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 252
++ + E PETIAA + EPV G GG I P + ++V+ + ++ ILF+ADE+ F R
Sbjct: 208 KNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFAR 267
Query: 253 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 312
G F + + + PDL++ +K+L A +PI ++ E+ + S LG TY+
Sbjct: 268 TGKYFAIEHFDVVPDLITVSKSL-GAGVPISGVIGRKEIMD--ESAPGELGG-----TYA 319
Query: 313 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLILGTEF 371
G P+ CA A+ L I ++ N+ ++ ++ + + IG++RG G + E
Sbjct: 320 GSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFEL 379
Query: 372 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPEEVDELISK 428
++ E P+ + A + K G+L+ +G I + P +++ E+++E ++
Sbjct: 380 VQDRKTKE---PDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTI 436
Query: 429 YGKALKATEER 439
++L+A E+
Sbjct: 437 IEESLQACYEK 447
>gnl|CDD|129792 TIGR00709, dat, 2,4-diaminobutyrate 4-transaminases. This family
consists of L-diaminobutyric acid transaminases. This
general designation covers both 2.6.1.76
(diaminobutyrate-2-oxoglutarate transaminase, which uses
glutamate as the amino donor in DABA biosynthesis), and
2.6.1.46 (diaminobutyrate--pyruvate transaminase, which
uses alanine as the amino donor). Most members with
known function are 2.6.1.76, and at least some
annotations as 2.6.1.46 in current databases at time of
model revision are incorrect. A distinct branch of this
family contains examples of 2.6.1.76 nearly all of which
are involved in ectoine biosynthesis. A related enzyme
is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also
called GABA transaminase. These enzymes all are
pyridoxal phosphate-containing class III
aminotransferase [Central intermediary metabolism,
Other].
Length = 442
Score = 164 bits (416), Expect = 6e-46
Identities = 127/445 (28%), Positives = 206/445 (46%), Gaps = 39/445 (8%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
P K++G +V DV GK+YLD LAG ALG + P + L + H+ + T
Sbjct: 22 PTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTL-DLT 80
Query: 76 TKPSLDLAKELLEMFTASKMA-KVFFTN-SGSEANDTQVKLVWYYNNALGRPNKKKFIAR 133
T + LL + KM K+ F SG++A + +KL Y GR N I+
Sbjct: 81 TPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYT---GRTN---VISF 134
Query: 134 QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR--YAHPGETEEEYSTR-LA 190
+HG T+ A +++G + P V PH +R + GE S
Sbjct: 135 SGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE 194
Query: 191 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 250
N +ED+ + G + AA I E + G GGV+ P+ + +K++ V +K+DI I DEV F
Sbjct: 195 NFIEDV--ESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGF 252
Query: 251 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 310
GR GTMF + I+PD V +KA+ +P+ +L++PE + H T
Sbjct: 253 GRSGTMFAFEHAGIEPDFVVMSKAVGGG-LPLAVLLIAPEF--------DAWQPAGHTGT 303
Query: 311 YSGHPVSCAVAIEALKIYKE----RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 366
+ G+ ++ EAL +K+ +N E+ +I D +K P IG +RG GL+
Sbjct: 304 FRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEH---PCIGNVRGRGLM 360
Query: 367 LGTEFADNKSPNE---PFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPE 420
G D + + +P + + A C ++G+L+ G + P + E
Sbjct: 361 QGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITIDQE 420
Query: 421 EVDELISKYGKALKATEERVKELKS 445
E +E IS++ +A+ EE + E++
Sbjct: 421 ECEEGISRFKQAV---EEALAEVRL 442
>gnl|CDD|235889 PRK06931, PRK06931, diaminobutyrate--2-oxoglutarate
aminotransferase; Provisional.
Length = 459
Score = 156 bits (396), Expect = 1e-42
Identities = 126/433 (29%), Positives = 203/433 (46%), Gaps = 32/433 (7%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNT-LPFYHSFWNR 74
PL I K++G +V DV G +YLD LAG ALG + P ++ + L + LP H+ +
Sbjct: 41 PLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPL-HTL-DL 98
Query: 75 TTKPSLDLAKELLEMFTASKMAKVF-FTN-SGSEANDTQVKLVWYYNNALGRPNKKKFIA 132
TT ++ LL + FT SG++A + +KL Y GR N I+
Sbjct: 99 TTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYT---GRSN---VIS 152
Query: 133 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR--YAHPGETEEEYSTRLA 190
YHG T A +++G + + P V PH +R GE + T
Sbjct: 153 FSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYF 212
Query: 191 NNL-EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 249
N ED+ + G AA I E + G GGV P P + +K++ V +K+ IL I DEV
Sbjct: 213 ENFIEDV--ESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAG 270
Query: 250 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 309
F R G MF + I+PD++ +KA+ +P+ A+L I + + H
Sbjct: 271 FARTGKMFAFEHAGIEPDIIVMSKAVGGG-LPL-AVL-------GIKKEFDAWQPGGHTG 321
Query: 310 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILG 368
T+ G+ ++ A + LKI KE N+ + + + + P IG +RG GL++G
Sbjct: 322 TFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIG 381
Query: 369 TEFADNKSPNE---PFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPEEV 422
E D + P + +P + + A C ++G+L+ G N + + PP +++ E
Sbjct: 382 IEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLPPLLITQAEC 441
Query: 423 DELISKYGKALKA 435
+E I ++ +AL A
Sbjct: 442 EEFIDRFEQALLA 454
>gnl|CDD|235716 PRK06149, PRK06149, hypothetical protein; Provisional.
Length = 972
Score = 160 bits (406), Expect = 2e-42
Identities = 127/430 (29%), Positives = 208/430 (48%), Gaps = 57/430 (13%)
Query: 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ---LNTLPFYHS 70
P IE+ +++D+ G+ YLD + + T LG PRL AAA Q LNT +H
Sbjct: 566 ADPPQIERGWRHHLFDMAGRSYLDMVNNV--TVLGHGHPRLAAAAARQWSLLNTNSRFH- 622
Query: 71 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 130
+ + S LA + + VF NSGSEAND ++L W + GR +
Sbjct: 623 -YAAVAEFSERLAALAPD-----GLDTVFLVNSGSEANDLAIRLAWAAS---GRRD---V 670
Query: 131 IARQKSYHGSTLIAASLSGLPALHQKFDLPA-----PFVLHT-DCPHYWRYAHPG-ETEE 183
++ ++YHG T+ ++S A D P P +H + P+ +R G ++
Sbjct: 671 VSVLEAYHGWTVATDAVSTSIA-----DNPQALETRPDWVHPVESPNTYRGRFRGADSAA 725
Query: 184 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 243
+Y + LE+L +A FI EPV G G I P Y ++V A V+ + IA
Sbjct: 726 DYVRDVVAQLEELDASGRG--LAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIA 783
Query: 244 DEVICAFGRLGTMF-GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTL 302
DEV +GRLG F G ++ + PD+++ AK + + + P+GA++ E++E + ++
Sbjct: 784 DEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGH-PLGAVITRREIAEALEAE---- 838
Query: 303 GSF--SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGE 359
G F S G G PVSC + + L + +E + E ++ + ++A +D P+IG
Sbjct: 839 GYFFSSTG----GSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGA 894
Query: 360 IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH---GMLVRVSGD--NIM-MSP 413
+ G GL LG E ++ EP E A C++ G++++ +GD NI+ + P
Sbjct: 895 VHGMGLYLGVELVRDRQTLEPATEE------TAAICDRLLELGVIMQPTGDHLNILKIKP 948
Query: 414 PFIMSPEEVD 423
P + E D
Sbjct: 949 PLCLDRESAD 958
>gnl|CDD|236149 PRK08088, PRK08088, 4-aminobutyrate aminotransferase; Validated.
Length = 425
Score = 154 bits (390), Expect = 3e-42
Identities = 104/382 (27%), Positives = 180/382 (47%), Gaps = 46/382 (12%)
Query: 14 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS-FW 72
+HP+ +++E V+DV G++YLD G+ G P++VAA AQL H+ F
Sbjct: 22 IHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKK--LSHTCFQ 79
Query: 73 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 132
+P L+L +++ + K +GSEA + VK+ G IA
Sbjct: 80 VLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSG------VIA 133
Query: 133 RQKSYHGSTLIAASLSGLPALHQK---------FDLPAPFVLHTDCPHYWRYAHPGETEE 183
+YHG T +L+G + + P LH G +E+
Sbjct: 134 FTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH------------GVSED 181
Query: 184 EYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILF 241
+ + + I K PE IAA I EPV G GG + ++++A+ ++ I+
Sbjct: 182 DAIASI-----ERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIML 236
Query: 242 IADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT 301
IADEV GR GT+F ++ + DL +FAK+++ + P+ + EV + I
Sbjct: 237 IADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGGF-PLAGVTGRAEVMDAI------ 289
Query: 302 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEI 360
G TY+G+P++CA A+ LK++++ N++++ N + K +DG+ A P IG++
Sbjct: 290 -APGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDV 348
Query: 361 RGTGLILGTEFADNKSPNEPFP 382
RG G ++ E ++ ++P
Sbjct: 349 RGLGAMIAIELFEDGDHSKPNA 370
>gnl|CDD|179803 PRK04260, PRK04260, acetylornithine aminotransferase; Provisional.
Length = 375
Score = 152 bits (386), Expect = 4e-42
Identities = 116/414 (28%), Positives = 189/414 (45%), Gaps = 70/414 (16%)
Query: 21 KSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 80
K+EG+Y+ D +GKKYLD +G+ T LG P++ A Q + +HS P+L
Sbjct: 17 KAEGNYLIDTDGKKYLDFSSGIGVTNLG-FHPQVQQALQKQAGLI--WHS-------PNL 66
Query: 81 ---DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSY 137
L +E+ + K FF NSG+EAN+ +K+ A G K++ I Q S+
Sbjct: 67 YLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIA---RKATG---KQEIITFQNSF 120
Query: 138 HGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLI 197
HG T + S +G + F V PH+ YA + N+L + +
Sbjct: 121 HGRTFGSMSATGQDKIKDGF---GDGV-----PHF-SYA------------IFNDL-NSV 158
Query: 198 LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF 257
+ AA + E V G GV+P + + + ++ IL I DEV GR G ++
Sbjct: 159 KALVNKNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY 218
Query: 258 GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF---SHGFTYSGH 314
+ Y I+PD+ + AK L++ +P+GA+L ++S+ G+F SHG T+ G+
Sbjct: 219 AFEHYGIEPDIFTLAKGLANG-VPVGAML----------AKSSLGGAFGYGSHGSTFGGN 267
Query: 315 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV-KAFSDSPIIGEIRGTGLILGTEFAD 373
+S A A L I +EQ + Q+ + KA D + +RG G ++G E
Sbjct: 268 KLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETTA 327
Query: 374 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELI 426
+ S G++V +G N I + PP ++ EE+++ I
Sbjct: 328 DLSQ-------------LVEAARDKGLIVLTAGTNVIRLLPPLTLTKEEIEQGI 368
>gnl|CDD|179636 PRK03715, argD, acetylornithine transaminase protein; Provisional.
Length = 395
Score = 152 bits (385), Expect = 1e-41
Identities = 113/373 (30%), Positives = 172/373 (46%), Gaps = 79/373 (21%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ----LNTLPFYHSF 71
+V +GS++YD NGK+YLD + G LG P +V A AQ +N P +F
Sbjct: 19 DIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSP---AF 75
Query: 72 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK--- 128
+N +P LA L + S KVFF NSG+EAN+ +KL + GR +K
Sbjct: 76 YN---EPMAKLAGLLTQ---HSCFDKVFFANSGAEANEGAIKLARKW----GRKHKNGAY 125
Query: 129 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 188
+ I S+HG TL S SG P F AP V PG + E
Sbjct: 126 EIITFDHSFHGRTLATMSASGKPGWDTIF---APQV-------------PGFPKAEL--- 166
Query: 189 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 248
N++ + +T+A + EPV G GGVIP + ++++A+ K++ +L I DEV
Sbjct: 167 --NDIASVEKLITDKTVAVML-EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT 223
Query: 249 AFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSH- 307
GR GT+F + I+PD+++ K + +P+ A+L EV+ F
Sbjct: 224 GCGRTGTLFAYELSGIEPDIMTLGKGIGGG-VPLAALLAKAEVA-----------VFEAG 271
Query: 308 --GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-----------FSDS 354
G TY+G+P+ AV + ++ Q+ +AP F +GV+A S+
Sbjct: 272 DQGGTYNGNPLMTAVGVA---------VISQL--LAPGFLEGVRARGEYLKEKLLELSEE 320
Query: 355 PIIGEIRGTGLIL 367
+ RG GL+
Sbjct: 321 RGLEGERGEGLLR 333
>gnl|CDD|235892 PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate
aminotransferase; Provisional.
Length = 464
Score = 150 bits (382), Expect = 9e-41
Identities = 128/458 (27%), Positives = 205/458 (44%), Gaps = 75/458 (16%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQL-NTLPFYHSFWNR 74
PL ++++ G YV DV G++++D LAG ALG + P ++ A L + LP +
Sbjct: 46 PLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLH------ 99
Query: 75 TTKPSLDLAKELLEMFTA----------SKMAKVFFTN-SGSEANDTQVKLVWYYNNALG 123
+LDL + + F ++ AK+ F +G++A + +KLV A G
Sbjct: 100 ----TLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLV---KTATG 152
Query: 124 RPNKKKFIARQKSYHGSTLIAASLSG-----------LPALHQKFDLPAPFVLHTDCPHY 172
R F Q YHG + A SL G LP + F LP P+ CP
Sbjct: 153 RSTVLSF---QGGYHGMSQGALSLMGNLGPKKPLGALLPGVQ--F-LPYPY--DYRCP-- 202
Query: 173 WRYAHPGETEEEYSTR-LANNLEDLILKEGPE----TIAAFIAEPVIGAGGVIPPPATYF 227
+ GE + L N L+D PE AA I E V G GGVIP P +
Sbjct: 203 --FGLGGEAGVRANLHYLENLLDD------PESGVVLPAAVILEVVQGEGGVIPAPIEWL 254
Query: 228 EKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILV 287
++ + ++ I I DE+ FGR G MF + I PD+V +KA IG L
Sbjct: 255 RGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKA-------IGGSL- 306
Query: 288 SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDG 347
P V +T +H T+ G+ ++ A L+ KE + E + + ++
Sbjct: 307 -PLAVVVYREWLDTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREH 365
Query: 348 VKAF-SDSPIIGEIRGTGLILGTEFAD-NKSPN-EPFPPEWG-IGAYFGAQCEKHGMLVR 403
++ D P +G++RG GL+LG E D P+ PP G + + +C + G+++
Sbjct: 366 LRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILE 425
Query: 404 VSGDN---IMMSPPFIMSPEEVDELISKYGKALKATEE 438
+ G + + PP I++ E++DE+ + +A+ A
Sbjct: 426 LGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAAVA 463
>gnl|CDD|235685 PRK06058, PRK06058, 4-aminobutyrate aminotransferase; Provisional.
Length = 443
Score = 148 bits (376), Expect = 4e-40
Identities = 112/430 (26%), Positives = 194/430 (45%), Gaps = 36/430 (8%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS-FWNR 74
P+ + ++ G V DV+G + +D +G+ T++G S PR+V A Q+ F H+ F
Sbjct: 39 PVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVAR--FTHTCFMVT 96
Query: 75 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 134
+ + +A++L + + NSG+EA + VK+ + GR +
Sbjct: 97 PYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIA---RSYTGRQ---AVVVFD 150
Query: 135 KSYHGSTLIAASLSG--LPALHQKFDLPAPFVLHTDCPHYWRYAH-PGETEEEYSTRLAN 191
+YHG T + +L+ +P F AP V + +R EE + R
Sbjct: 151 HAYHGRTNLTMALTAKSMPYKSG-FGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAIT 209
Query: 192 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 251
+E + G + +AA I EP+ G GG I P + + ++ ++FIADEV F
Sbjct: 210 VIEKQV---GADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFA 266
Query: 252 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 311
R G F C+ I PDL++ AK ++ +P+ A+ E+ + H LG TY
Sbjct: 267 RTGAWFACEHEGIVPDLITTAKGIAGG-LPLSAVTGRAEIMDAPHPGG--LGG-----TY 318
Query: 312 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTE 370
G+PV+CA A+ A++ +E ++V + +I D ++A + IG++RG G ++ E
Sbjct: 319 GGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIE 378
Query: 371 F--ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVDEL 425
P+ E + A G++V G + I + PP ++ E + E
Sbjct: 379 LVKPGTTEPD----AE--LTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLREG 432
Query: 426 ISKYGKALKA 435
+ AL
Sbjct: 433 LDVLEAALAD 442
>gnl|CDD|168145 PRK05639, PRK05639, 4-aminobutyrate aminotransferase; Provisional.
Length = 457
Score = 148 bits (374), Expect = 9e-40
Identities = 119/433 (27%), Positives = 216/433 (49%), Gaps = 40/433 (9%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
PLV ++ G+ + DV+G ++D LAG + G S P+LV A Q+ + HS T
Sbjct: 36 PLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQ--HSMIGYT 93
Query: 76 -TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 134
++ ++ +A++L E+ + + KV F SGS+A D +K+ + + RP FI
Sbjct: 94 HSERAIRVAEKLAEI-SPIENPKVLFGLSGSDAVDMAIKVSKF---STRRPWILAFIG-- 147
Query: 135 KSYHGSTLIAASLSGLPALHQK-FDLPAPFVLHTDCPHYWR-------YAHPGETEEEYS 186
+YHG TL A S++ + ++ F P V+ P+ +R Y P +E
Sbjct: 148 -AYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEP----DELI 202
Query: 187 TRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 244
R + LE+ + P+ +AA AEP+ G G++ PP +F++++ ++ ++ IL + D
Sbjct: 203 NRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMD 262
Query: 245 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 304
EV GR G F + + +KPDL+ F K ++S M + ++ E+ + L S
Sbjct: 263 EVQTGIGRTGKWFASEWFEVKPDLIIFGKGVASG-MGLSGVIGRKELMD--------LTS 313
Query: 305 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGT 363
S T + +PV A A L+I +E N+++ K+ + + +S +IG++RG
Sbjct: 314 GSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGK 373
Query: 364 GLILGTEFA-DNKSPNEPFPPEWGIGAY-FGAQCEKHGMLVRVSGDNIMMSPPFIMSPEE 421
GL++G E +N P+ + A+ G +GM G+ I ++PP +++ E
Sbjct: 374 GLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYGMF----GNVIRITPPLVITKEI 429
Query: 422 VDELISKYGKALK 434
++ + +A+K
Sbjct: 430 AEKGLEIMERAIK 442
>gnl|CDD|236032 PRK07495, PRK07495, 4-aminobutyrate aminotransferase; Provisional.
Length = 425
Score = 141 bits (358), Expect = 1e-37
Identities = 101/375 (26%), Positives = 173/375 (46%), Gaps = 44/375 (11%)
Query: 20 EKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS 79
+++E + ++D G++Y+D AG+ G PR++AA AQL+ F H+ +
Sbjct: 27 DRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDR--FTHTCHQVVPYEN 84
Query: 80 -LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYH 138
+ LA+ L + K F +G+EA + VK+ A GR IA +H
Sbjct: 85 YVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIA---RAATGRS---AVIAFGGGFH 138
Query: 139 GSTLIAASLSGLPALHQK---------FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 189
G T + SL+G ++ + +P P LH G + E+ L
Sbjct: 139 GRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELH------------GVSVEQSLAAL 186
Query: 190 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 249
+ + P+ +AA I EPV G GG P PA + + ++ + ++ IL IADEV
Sbjct: 187 DKLFKADV---DPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTG 243
Query: 250 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 309
F R G +F + + + DL + AK L+ + P+ A+ E+ + G G
Sbjct: 244 FARTGKLFAMEHHEVAADLTTMAKGLAGGF-PLAAVTGRAEIMDAPG-----PGGL--GG 295
Query: 310 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILG 368
TY G+P+ A A L + +E ++ E+ N++ + + + + ++ P I +IRG G +
Sbjct: 296 TYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNA 355
Query: 369 TEF--ADNKSPNEPF 381
EF AD+ P+ F
Sbjct: 356 VEFNDADSGLPSAEF 370
>gnl|CDD|233100 TIGR00713, hemL, glutamate-1-semialdehyde-2,1-aminomutase. This
enzyme, glutamate-1-semialdehyde-2,1-aminomutase
(glutamate-1-semialdehyde aminotransferase, GSA
aminotransferase), contains a pyridoxal phosphate
attached at a Lys residue at position 283 of the seed
alignment. It is in the family of class III
aminotransferases [Biosynthesis of cofactors, prosthetic
groups, and carriers, Heme, porphyrin, and cobalamin].
Length = 423
Score = 140 bits (354), Expect = 4e-37
Identities = 97/376 (25%), Positives = 168/376 (44%), Gaps = 45/376 (11%)
Query: 11 STDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS 70
S P + + +G+Y+YDV+G +Y+D + LG + PR+V A L +
Sbjct: 26 SVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALE----RGT 81
Query: 71 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 130
+ T+ + LAKE++ + + V F NSG+EA + V+L A G + K
Sbjct: 82 SYGAPTEAEILLAKEIISRVPS--VEMVRFVNSGTEATMSAVRL------ARGYTGRDKI 133
Query: 131 IARQKSYHGS--TLIAASLSGL--PALHQKFDLPAPFVLHT-DCPHYWRYAHPGETEEEY 185
I + YHG L+ + SG L +P F T P+
Sbjct: 134 IKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPY-------------- 179
Query: 186 STRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 243
N+LE L + +E E IA I EPV G GV+PP + ++A+ ++Y L I
Sbjct: 180 -----NDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIF 234
Query: 244 DEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG 303
DEV+ F R+ + + ++PDL + K + +P+GA E+ E + + G
Sbjct: 235 DEVMTGF-RVALGGAQEYFGVEPDLTTLGKIIGGG-LPVGAFGGRREIMERLAPE----G 288
Query: 304 SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV-KAFSDSPIIGEIRG 362
T SG+P++ A + LK+ E + +++++A + +G+ + D+ I +
Sbjct: 289 PVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNR 348
Query: 363 TGLILGTEFADNKSPN 378
G + F + + N
Sbjct: 349 VGSMFSLFFTEEEVTN 364
>gnl|CDD|180426 PRK06148, PRK06148, hypothetical protein; Provisional.
Length = 1013
Score = 143 bits (362), Expect = 9e-37
Identities = 115/428 (26%), Positives = 191/428 (44%), Gaps = 48/428 (11%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
P+ + G ++ D G+ YLD + C +G + PR+VAAA Q L N
Sbjct: 607 PIKFVRGWGVWLIDNRGRAYLDCFNNV-C-HVGHAHPRVVAAAARQAARL-------NTN 657
Query: 76 TK---PSL-DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 131
T+ ++ A+ L + FF NSGSEAN ++L + + I
Sbjct: 658 TRYLHDAIVAYAERLTATLPDG-LTVAFFVNSGSEANSLALRLARAHTGQ------RDAI 710
Query: 132 ARQKSYHGSTLIAASLSGLPALHQKFDLP-----APFVLHTDCPHYWRYAHPGETEEEYS 186
+YHG+T LS KF+ V + P +R + E+
Sbjct: 711 VLDHAYHGTTTELIDLSPY-----KFNRKGGKGRPDHVEVAEVPDSYR-GPERWPDAEHG 764
Query: 187 TRLANNLEDLI--LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 244
R A ++ + I + A FIAE + G I P Y +V A+V+ + IAD
Sbjct: 765 RRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIAD 824
Query: 245 EVICAFGRLGT-MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG 303
EV FGR+G+ + + + PD+V+ K + + + P+GA++ + E+++ S N +
Sbjct: 825 EVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGH-PMGAVVTTREIAD---SFDNGME 880
Query: 304 SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRG 362
F+ T+ G+PVSCA+ + L I ++ ++ +I G++ D IIG++RG
Sbjct: 881 YFN---TFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRG 937
Query: 363 TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIM-MSPPFIMSP 419
GL LG E ++ P I Y + G+L+ G DN++ + PP I S
Sbjct: 938 MGLFLGIELVTDRKTKAPAT---AIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSR 994
Query: 420 EEVDELIS 427
+ D L+
Sbjct: 995 ADADHLLE 1002
>gnl|CDD|180690 PRK06777, PRK06777, 4-aminobutyrate aminotransferase; Provisional.
Length = 421
Score = 137 bits (346), Expect = 4e-36
Identities = 105/359 (29%), Positives = 176/359 (49%), Gaps = 30/359 (8%)
Query: 20 EKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS 79
E++E + ++DV G++Y+D AG+ G P++VAA QL+ F H+ + S
Sbjct: 27 ERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQ--FTHTAYQIVPYAS 84
Query: 80 -LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYH 138
+ LA+ + + AK F +G+EA + VK+ Y GRP IA ++H
Sbjct: 85 YVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYT---GRPG---VIAFGGAFH 138
Query: 139 GSTLIAASLSGLPALHQKFDLPAP-FVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLI 197
G TL+ +L+G A ++ P P + H P+ G + EE A + + +
Sbjct: 139 GRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPN----ELHGVSVEE-----ALSSVERL 189
Query: 198 LKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 255
K P+ +AA + EP+ G GG P + ++ + ++ IL IADEV F R G
Sbjct: 190 FKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGK 249
Query: 256 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 315
+F + Y +KPDL++ AK+L MPI A++ EV + + G G TY+G+P
Sbjct: 250 LFAMEYYDVKPDLITMAKSLGGG-MPISAVVGRAEVMD-----APAPGGL--GGTYAGNP 301
Query: 316 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV-KAFSDSPIIGEIRGTGLILGTEFAD 373
++ A A+ L + E + ++ + + + KA + P I +IR G ++ EF D
Sbjct: 302 LAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFND 360
>gnl|CDD|234607 PRK00062, PRK00062, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 426
Score = 125 bits (316), Expect = 1e-31
Identities = 115/467 (24%), Positives = 187/467 (40%), Gaps = 122/467 (26%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTA-----LGGSEPRLVAAATAQLNT-----L 65
P IE+++G+Y+YDV+G +Y+D + + LG + P +V A
Sbjct: 33 PRFIERAKGAYLYDVDGNEYID-----YVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGA 87
Query: 66 PFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRP 125
P T+ ++LA+ ++E+ + + V NSG+EA + ++L A G
Sbjct: 88 P---------TELEVELAELVIELVPS--IEMVRMVNSGTEATMSAIRL------ARGYT 130
Query: 126 NKKKFIARQKSYHG---STLIAASLSGLPALHQKFDL--PAPFVLHT-DCPHYWRYAHPG 179
+ K I + YHG S L+ A SG L P F HT P
Sbjct: 131 GRDKIIKFEGCYHGHADSLLVKAG-SGAATLGLPDSPGVPEDFAKHTLTAP--------- 180
Query: 180 ETEEEYSTRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY 237
Y N+LE + + +E + IAA I EPV G GV+PP + E ++ + ++
Sbjct: 181 -----Y-----NDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEH 230
Query: 238 DILFIADEVICAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAI--------LV 287
L I DEV+ F R+ G Y + PDL + K + +P+GA +
Sbjct: 231 GALLIFDEVMTGF-RVA--LGGAQGYYGVTPDLTTLGKIIGGG-LPVGAFGGRREIMEQL 286
Query: 288 SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDG 347
+P LG T SG+P++ A + LK+ KE E++ + + +G
Sbjct: 287 AP------------LGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEG 334
Query: 348 VK-AFSDSPIIGEIRGTGLILGTEFADNKSPN---------EPFPPEWGIGAYFGAQCEK 397
+K A + I + G + G F D N E F +F
Sbjct: 335 LKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERF------ARFF------ 382
Query: 398 HGMLVRVSGDNIMMSPP------FI---MSPEEVDELISKYGKALKA 435
H ML G + P F+ + E++++ + KA A
Sbjct: 383 HAMLDE--GVYL---APSQFEAGFVSAAHTDEDIEKTLEAARKAFAA 424
>gnl|CDD|233853 TIGR02407, ectoine_ectB, diaminobutyrate--2-oxoglutarate
aminotransferase. Members of this family of class III
pyridoxal-phosphate-dependent aminotransferases are
diaminobutyrate--2-oxoglutarate aminotransferase (EC
2.6.1.76) that catalyze the first step in ectoine
biosynthesis from L-aspartate beta-semialdehyde. This
family is readily separated phylogenetically from
enzymes with the same substrate and product but involved
in other process such as siderophore (SP|Q9Z3R2) or
1,3-diaminopropane (SP|P44951) biosynthesis. The family
TIGR00709 previously included both groups but has now
been revised to exclude the ectoine biosynthesis
proteins of this family. Ectoine is a compatible solute
particularly effective in conferring salt tolerance
[Cellular processes, Adaptations to atypical
conditions].
Length = 412
Score = 121 bits (305), Expect = 2e-30
Identities = 105/428 (24%), Positives = 181/428 (42%), Gaps = 63/428 (14%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
P V EK++GS ++D +GK+Y+D AG G + P+L A L HS
Sbjct: 18 PTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHS----- 72
Query: 76 TKPSLDLA----KELLEMFTASKMA------KVFFTN-SGSEANDTQVKLVWYYNNALGR 124
LD+A +E LE F + KV F +G+ A ++ +KL GR
Sbjct: 73 ----LDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLA---RKVTGR 125
Query: 125 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 184
N ++ ++HG TL + S++G Q +P V Y + +
Sbjct: 126 SN---VVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYL------GGDVD 176
Query: 185 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 244
LED G + AA I E V G GG+ + ++++ + +++DIL I D
Sbjct: 177 TIAYFEKLLEDS--SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVD 234
Query: 245 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 304
++ GR GT F + I+PD+V +K++S +P+ L+ PE+ +
Sbjct: 235 DIQAGCGRTGTFFSFEPAGIEPDIVCLSKSISGYGLPLALTLIKPEL--------DVWKP 286
Query: 305 FSHGFTYSGHPVSCAVAIEALKIY-----KERNIVEQVNKIAPKFQDGVKAFSDSPIIGE 359
H T+ G+ ++ A AL+ Y E+ + + I + V + + +I +
Sbjct: 287 GEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPE--LIKQ 344
Query: 360 IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFI 416
+RG GL+ G E D + ++G+++ SG N I + PP
Sbjct: 345 VRGRGLMQGIECGDG-----------DLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLT 393
Query: 417 MSPEEVDE 424
+ E + +
Sbjct: 394 IDEETLQQ 401
>gnl|CDD|101376 PRK04013, argD, acetylornithine/acetyl-lysine aminotransferase;
Provisional.
Length = 364
Score = 118 bits (298), Expect = 7e-30
Identities = 107/411 (26%), Positives = 178/411 (43%), Gaps = 72/411 (17%)
Query: 17 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT 76
L + + EG YV+D G++YLD +AG+ LG + P V + QL L +
Sbjct: 8 LRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEE 67
Query: 77 KPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 135
K +E+LE + V+ NSG+EA + +K Y GR K+ IA
Sbjct: 68 K------EEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARLYT---GR---KEIIAMTN 115
Query: 136 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 195
++HG T+ A S + P + F+ P V PG + N++E
Sbjct: 116 AFHGRTMGALSATWKPKYREDFE---PLV-------------PGFKHIPF-----NDVE- 153
Query: 196 LILKEG-PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 254
KE + AA I EP+ G GG++P + + ++ + + L IADEV R G
Sbjct: 154 -AAKEAITKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTG 211
Query: 255 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 314
+ Y ++PD+V+ K + + +P+ L + +V HG T+ G+
Sbjct: 212 KFLAIEHYKVEPDIVTMGKGIGNG-VPVSLTLTNFDVER-----------GKHGSTFGGN 259
Query: 315 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADN 374
P++C L+I + +VE K KF + ++ RG GL++G
Sbjct: 260 PLACKAVAVTLRILRRERLVE---KAGEKFIE----IKGERVV-TTRGRGLMIGIVL--- 308
Query: 375 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDE 424
K P +G Y + + G LV +G ++ + PP I+S + ++E
Sbjct: 309 KKP---------VGKYV-EELQNRGYLVHTAGQRVIRLLPPLIISKDTMEE 349
>gnl|CDD|182078 PRK09792, PRK09792, 4-aminobutyrate transaminase; Provisional.
Length = 421
Score = 120 bits (301), Expect = 7e-30
Identities = 100/359 (27%), Positives = 171/359 (47%), Gaps = 28/359 (7%)
Query: 22 SEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS-L 80
+E + + DV G +Y+D AG+ G P LVAA QL F H+ + S +
Sbjct: 29 AENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQ--FTHTAYQIVPYESYV 86
Query: 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGS 140
LA+++ + S AK F +G+EA + VK+ + GRP IA +HG
Sbjct: 87 TLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHT---GRPG---VIAFSGGFHGR 140
Query: 141 TLIAASLSGLPALHQKFDLPAP-FVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK 199
T + +L+G A ++ P P V H +P + + + +E L
Sbjct: 141 TYMTMALTGKVAPYKIGFGPFPGSVYHV--------PYPSDLHGISTQDSLDAIERLFKS 192
Query: 200 E-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG 258
+ + +AA I EPV G GG P ++ + ++ I+ IADEV F R G +F
Sbjct: 193 DIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFA 252
Query: 259 CDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC 318
D Y+ KPDL++ AK+L+ MP+ ++ + + + + G G TY+G+P++
Sbjct: 253 MDHYADKPDLMTMAKSLAGG-MPLSGVVGNANIMD-----APAPGGL--GGTYAGNPLAV 304
Query: 319 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFADNKS 376
A A L I + ++ E+ N++ + ++ + +S P I +RG G ++ EF D ++
Sbjct: 305 AAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQT 363
>gnl|CDD|183493 PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 428
Score = 106 bits (267), Expect = 4e-25
Identities = 101/348 (29%), Positives = 160/348 (45%), Gaps = 48/348 (13%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
P+V+E+ +G+Y YDV+G KY+D LA G + P + A T Y +
Sbjct: 36 PVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGT----P 91
Query: 76 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 135
T+ ++ AK L E + + KV F NSG+EA T +++ Y GR KF
Sbjct: 92 TELEIEFAKMLKEAIPS--LEKVRFVNSGTEAVMTTIRVARAYT---GRTKIIKFAG--- 143
Query: 136 SYHGST---LIAASLSGLPALHQKFDLPAPFVLHT-DCPHYWRYAHPGETEEEYSTRLAN 191
YHG + L+AA SG P L T D P +E T N
Sbjct: 144 CYHGHSDLVLVAAG-SG------------PSTLGTPDSA-----GVPKSIAQEVITVPFN 185
Query: 192 NLEDL---ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 248
++E L + K G E +AA + EP++G G++ P + E V + + L I DEVI
Sbjct: 186 DIEALKEALDKWGDE-VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVIT 244
Query: 249 AFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 306
AF R M+G D ++PDL + K + +PIGA ++ E Q LG
Sbjct: 245 AF-RF--MYGGAQDLLGVEPDLTALGKIIGGG-LPIGAYGGRKDIME----QVAPLGPAY 296
Query: 307 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 354
T +G+P S A I L++ ++ + E+++++ ++G+ ++
Sbjct: 297 QAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEK 344
>gnl|CDD|236437 PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate
aminotransferase; Validated.
Length = 425
Score = 101 bits (255), Expect = 1e-23
Identities = 115/438 (26%), Positives = 192/438 (43%), Gaps = 83/438 (18%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTAL--GGSEPRLVAAATAQLNTLPFYHSFWN 73
P+V +K++GS++YD +GK+Y+D AG AL G + P L A L H
Sbjct: 22 PVVFDKAKGSWLYDEDGKEYIDFFAG--AGALNYGHNNPVLKQALIDYLQRDGITHG--- 76
Query: 74 RTTKPSLDLA----KELLEMFTASKMA------KVFFTN-SGSEANDTQVKLVWYYNNAL 122
LD+ +E LE F + + KV FT +G+ A + +KL
Sbjct: 77 ------LDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLA---RKVT 127
Query: 123 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE 182
GR N +A +HG TL + +++G Q +P V P Y Y
Sbjct: 128 GRTN---IVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRM--P-YDGYFGGDVDT 181
Query: 183 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 242
Y +L LED G + AA I E V G GG+ A + +++ + +K+DIL I
Sbjct: 182 LAYLEKL---LEDS--SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLI 236
Query: 243 ADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTL 302
D++ GR GT F ++ I PD+V+ +K++S +P+ +L+ PE+ + N
Sbjct: 237 VDDIQAGCGRTGTFFSFERAGITPDIVTLSKSISGYGLPMALVLIKPELDVWKPGEHN-- 294
Query: 303 GSF---SHGFTYSGHPVSCAVAIE----------ALKIYKERNIVEQVNKIAPKFQDGVK 349
G+F + F V+ A+E +K K + E++ +IA K+
Sbjct: 295 GTFRGNNLAF------VTATAALEEYWSDDAFEKEVK-AKGELVRERLEEIAAKY----- 342
Query: 350 AFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN- 408
+ E+RG G++ G +F D + A+ ++G+++ SG
Sbjct: 343 ----PGLGAEVRGRGMMQGIDFGDG-----------ELAGKIAAEAFENGLIIETSGPED 387
Query: 409 --IMMSPPFIMSPEEVDE 424
+ + PP + EE++E
Sbjct: 388 EVVKLLPPLTIDEEELEE 405
>gnl|CDD|180471 PRK06209, PRK06209, glutamate-1-semialdehyde 2,1-aminomutase;
Provisional.
Length = 431
Score = 101 bits (253), Expect = 3e-23
Identities = 91/353 (25%), Positives = 144/353 (40%), Gaps = 73/353 (20%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 75
P I++ G++V+DV+G +Y++ GL LG + P +V A L
Sbjct: 31 PGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREAL-------QDGCNF 83
Query: 76 TKPS---LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYN--NALGRPNKKKF 130
T+PS LD A+ LE+ + M K F +GS+A V+L Y + + R F
Sbjct: 84 TRPSAIELDAAESFLELIDGADMVK--FCKNGSDATSAAVRLARAYTGRDLVARCADHPF 141
Query: 131 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 190
+ + G+T ++A G+PA L F RY
Sbjct: 142 FSTDDWFIGTTPMSA---GIPASVS--ALTVTF----------RY--------------- 171
Query: 191 NNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 248
N++ L + ++ P IA I EP P + +V+ + + LFI DE+I
Sbjct: 172 NDIASLEALFEDHPGRIACVILEPATAD----EPQDGFLHEVRRLCHENGALFILDEMIT 227
Query: 249 AFGRLGTMFGCDKYSIKPDLVSFAKALS-----SA------YMPIGAILVSPEVSEVIHS 297
F R Y I PDL F KAL SA YM +G + + E +
Sbjct: 228 GF-RWHMRGAQKLYGIVPDLSCFGKALGNGFAVSALAGKREYMELGGLEHTDR--ERVFL 284
Query: 298 QSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 350
S T G+ +H A AI + IY++ +++E++++ K GV
Sbjct: 285 LSTTHGAETHAL---------AAAIATMAIYRDEDVIERLHEQGAKLAAGVNE 328
>gnl|CDD|236224 PRK08297, PRK08297, L-lysine aminotransferase; Provisional.
Length = 443
Score = 101 bits (253), Expect = 3e-23
Identities = 115/464 (24%), Positives = 180/464 (38%), Gaps = 81/464 (17%)
Query: 12 TDVHPLV--IEKSEGSYVYDVN-GKKYLDSLAGLWCTALGGSEPRLVAA-------ATAQ 61
D LV +E+S+GSY+ D G++YLD +ALG + P L A
Sbjct: 21 VDGFDLVLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAA 80
Query: 62 LNTLPFYHSFWNRTTKPSL-DLAKELLEMF--TASKMA------KVFFTNSGSEA--NDT 110
LN KPS D+ + F T +++ +FF + G+ A N
Sbjct: 81 LN-------------KPSNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENAL 127
Query: 111 QVKLVW--YYNNALGRPNKK--KFIARQKSYHGSTLIAASLSG-LPALHQ---KFDLPAP 162
+V W N A G K + + ++HG + SL+ P KFD P
Sbjct: 128 KVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWP-- 185
Query: 163 FVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVI 220
D P R+ PGE EE A L + P IA FIAEP+ G GG
Sbjct: 186 ---RIDNPKL-RFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDN 241
Query: 221 PPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYM 280
+F ++ + ++D L I DEV G GT + + ++PD+V+F K
Sbjct: 242 HFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKK-----T 296
Query: 281 PIGAILVSPEVSEV---IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV 337
+ I+ V EV + + S+ + S T+ G+ V A L++ +E +VE
Sbjct: 297 QVCGIMAGRRVDEVEDNVFAVSSRINS-----TWGGNLVDMVRARRILEVIEEDGLVENA 351
Query: 338 NKIAPKFQDG----VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGA 393
+ F ++ +RG GL+ + +E
Sbjct: 352 ARQGEYLLARLEELAAEFPA--VVSNVRGRGLMCAFDLPTTADRDE-----------VIR 398
Query: 394 QCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKYGKALKAT 436
+ + G+LV G+ I P ++ EE+D I +AL
Sbjct: 399 RLWEEGVLVLPCGERSIRFRPALTVTTEEIDAAIDALRRALPEV 442
>gnl|CDD|132295 TIGR03251, LAT_fam, L-lysine 6-transaminase. Characterized members
of this protein family are L-lysine 6-transaminase, also
called lysine epsilon-aminotransferase (LAT). The
immediate product of the reaction of this enzyme on
lysine, 2-aminoadipate 6-semialdehyde, becomes
1-piperideine 6-carboxylate, or P6C. This product may be
converted subsequently to pipecolate or
alpha-aminoadipate, lysine catabolites that may be
precursors of certain seconary metabolites.
Length = 431
Score = 92.1 bits (229), Expect = 3e-20
Identities = 107/457 (23%), Positives = 174/457 (38%), Gaps = 75/457 (16%)
Query: 12 TDVHPLV--IEKSEGSYVYDVN-GKKYLDSLAGLWCTALGGSEPRLV--AAATAQLNTLP 66
TD LV +++S GS + D G++YLD + ALG + P LV A A+L
Sbjct: 14 TDGFDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAA 73
Query: 67 FYHSFWNRTTKPS-LDLAKELLEMFTAS--------KMAKVFFTNSGSEA--NDTQVKLV 115
KPS D+ + F + + +FF G+ A N +
Sbjct: 74 V--------NKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFD 125
Query: 116 W--YYNNALGRPNKK--KFIARQKSYHGSTLIAASLSGL----PALHQKFDLPAPFVLHT 167
W +N A G P + + ++++HG + SL+ A KFD P
Sbjct: 126 WKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWP-----RI 180
Query: 168 DCPHYWRYAHPGETEEEYSTRLANNLEDL-----ILKEGPETIAAFIAEPVIGAGGVIPP 222
D P +A E L E P IA FIAEP+ G GG
Sbjct: 181 DNP----KLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHF 236
Query: 223 PATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPI 282
+ ++A+ ++D L I DEV G GT + + ++PD+V+F K +
Sbjct: 237 RPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKTQ-----V 291
Query: 283 GAILVSPEVSEV---IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVE---- 335
I+ V EV + + + L S T+ G+ V A L+I +E +V+
Sbjct: 292 CGIMAGRRVDEVADNVFAVPSRLNS-----TWGGNLVDMVRATRILEIIEEERLVDNARV 346
Query: 336 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC 395
Q + + + F ++ RG GL+ + +E I +
Sbjct: 347 QGAHLLARLHELAAEFPH--LVSNPRGRGLMCAFDLPSTADRDEV------IRQLY---- 394
Query: 396 EKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKA 432
+ +L+ +I PP ++ EE+D I +
Sbjct: 395 REGVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRRV 431
>gnl|CDD|178100 PLN02482, PLN02482, glutamate-1-semialdehyde 2,1-aminomutase.
Length = 474
Score = 92.1 bits (229), Expect = 4e-20
Identities = 96/343 (27%), Positives = 152/343 (44%), Gaps = 50/343 (14%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTA-LGGSEPRLVAAATAQLNTLPFYHSFWNR 74
P+V ++ +GSY +DV+G +Y+D + G W A +G ++ ++AA + SF
Sbjct: 82 PIVFDRVKGSYAWDVDGNEYIDYV-GSWGPAIIGHADDEVLAALAETMKK---GTSF--- 134
Query: 75 TTKPSLDLAKELLEMFTAS--KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 132
P L L L EM + + V F NSG+EA ++L Y ++K I
Sbjct: 135 -GAPCL-LENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTG------REKIIK 186
Query: 133 RQKSYHG---STLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 189
+ YHG S L+ A SG+ L LP D P P T
Sbjct: 187 FEGCYHGHADSFLVKAG-SGVATL----GLP-------DSP-----GVPKAATSATLTAP 229
Query: 190 ANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI 247
N+LE + + + IAA I EPV+G G I P + E ++ + K+ L + DEV+
Sbjct: 230 YNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVM 289
Query: 248 CAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF 305
F R+ +G + + I PDL + K + +P+GA E+ E++ G
Sbjct: 290 TGF-RIA--YGGAQEYFGITPDLTTLGKVIGGG-LPVGAYGGRREIMEMVAPA----GPM 341
Query: 306 SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV 348
T SG+P++ I LK ++ E ++KI K G+
Sbjct: 342 YQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGI 384
>gnl|CDD|215526 PLN02974, PLN02974, adenosylmethionine-8-amino-7-oxononanoate
transaminase.
Length = 817
Score = 91.7 bits (228), Expect = 1e-19
Identities = 92/366 (25%), Positives = 142/366 (38%), Gaps = 81/366 (22%)
Query: 78 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW--YY-------NNALGRPNKK 128
P+L A+ LL ++VFF+++GS A + +K+ + + N+ +
Sbjct: 410 PALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGD 469
Query: 129 ----KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY------------ 172
K +A SYHG TL A + P+ F P Y
Sbjct: 470 LIELKVLALDGSYHGDTLGA----------MEAQAPSVFTGFLQQPWYSGRGLFLDPPTV 519
Query: 173 ------WRYAHP----GETEEEY---------------STRLANNLEDLILKE------- 200
W + P E E ST LA I ++
Sbjct: 520 GMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEAS 579
Query: 201 -GPETIAAFIAEPVI-GAGG--VIPPPATYFEKV-QAVVKKYDILFIADEVICAFGRLGT 255
IAA I EPV+ GAGG +I P F++ V + I I DEV RLG
Sbjct: 580 AKNGHIAALIIEPVLHGAGGMLLIDP---LFQRALVQVCRSRKIPVIFDEVFTGLWRLGV 636
Query: 256 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 315
+ KPD+ +AK L+ +P+ A L + EV E S HG +Y+ HP
Sbjct: 637 ESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALL-HGHSYTAHP 695
Query: 316 VSCAVAIEALKIYKE----RNIVEQVNKIAPKF-QDGVKAFSDSPIIGEIRGTGLILGTE 370
+ CA A +AL+ YK+ N++ +++ + ++ V+A S P + + G +L E
Sbjct: 696 MGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALE 755
Query: 371 FADNKS 376
S
Sbjct: 756 LDAEGS 761
>gnl|CDD|129782 TIGR00699, GABAtrns_euk, 4-aminobutyrate aminotransferase,
eukaryotic type. This enzyme is a class III
pyridoxal-phosphate-dependent aminotransferase. This
model describes known eukaryotic examples of the enzyme.
The degree of sequence difference between this set and
known bacterial examples is greater than the distance
between either set the most similar enzyme with distinct
function, and so separate models are built for
prokaryotic and eukaryotic sets. Alternate names include
GABA transaminase, gamma-amino-N-butyrate transaminase,
and beta-alanine--oxoglutarate aminotransferase [Central
intermediary metabolism, Other].
Length = 464
Score = 88.0 bits (218), Expect = 9e-19
Identities = 80/296 (27%), Positives = 130/296 (43%), Gaps = 50/296 (16%)
Query: 20 EKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK-- 77
EKS G+Y+ DV+G + LD + + +G + P L+ AA + + NR
Sbjct: 45 EKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMA----TTLINRPALGN 100
Query: 78 -PSLDLAKELLE--MFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR 133
PS D AK L E + A K +V+ SGS+AN+ K + Y + R + F
Sbjct: 101 FPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEE 160
Query: 134 Q---------------------KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH- 171
+ ++HG + S + +H K D+PA D P
Sbjct: 161 ENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIH-KLDIPA-----FDWPQA 214
Query: 172 -YWRYAHPGE------TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPA 224
+ +P E +EE R +EDLI K+ + +AA I EP+ GG
Sbjct: 215 PFPSLKYPLEEHVKENAKEE--QRCLEEVEDLI-KKWHKPVAAIIVEPIQSEGGDNHASP 271
Query: 225 TYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK--PDLVSFAKALSSA 278
+F K++ + KK+++ FI DEV G G + + +++ PD+V+F+K +A
Sbjct: 272 DFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTA 327
>gnl|CDD|234803 PRK00615, PRK00615, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 433
Score = 78.3 bits (193), Expect = 1e-15
Identities = 82/361 (22%), Positives = 141/361 (39%), Gaps = 49/361 (13%)
Query: 11 STDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAA--ATAQLNTLPF 67
S + P ++ + G D GK ++D G W + + G S P++ A A+ T
Sbjct: 31 SVGITPPIVSSASGDIFIDSLGKTFID-FCGSWGSLIHGHSHPKICDAIQQGAERGT--- 86
Query: 68 YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 127
+ T++ + A+EL K+ F +SG+EA T V+L GR
Sbjct: 87 ---SYGLTSEQEILFAEELFSYLGLEDH-KIRFVSSGTEATMTAVRLA---RGITGRSII 139
Query: 128 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 187
KF+ YHG L G+ D ++ TD H + P
Sbjct: 140 IKFLG---CYHGHADTL--LQGISFSETSLD-TLTHLVDTDLAHPLTLSLP--------- 184
Query: 188 RLANNL---EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 244
N+ + ++ G +A I EP+ GV+ P + E + ++ L I D
Sbjct: 185 --YNDFQIFQTVMNSLGHR-VAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMD 241
Query: 245 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 304
EV+ F R+ Y +KPD+ + K L +P A++ + + + G+
Sbjct: 242 EVVTGF-RVAQGGAAAIYHVKPDITVYGKILGGG-LPAAAVVAHKSIMDHLAP----EGT 295
Query: 305 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTG 364
T SG+P++ A ++ + +E+ Q++ + F SPI IR G
Sbjct: 296 IFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFL--------SPIEEMIRSQG 347
Query: 365 L 365
Sbjct: 348 F 348
>gnl|CDD|235917 PRK07046, PRK07046, aminotransferase; Validated.
Length = 453
Score = 48.8 bits (117), Expect = 3e-06
Identities = 78/337 (23%), Positives = 133/337 (39%), Gaps = 86/337 (25%)
Query: 16 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCT----ALGGSEPRLVAAATAQ-----LNT-L 65
PL + ++ G+ DV+G +Y D +C A+ G P VA A A+ L T L
Sbjct: 58 PLFVAEARGARFTDVDGHRYDD-----FCLGDTGAMFGHSPAPVARALAEQARRGLTTML 112
Query: 66 PFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL-GR 124
P ++ + + +EL F + + ++AN + V + A+ GR
Sbjct: 113 P---------SEDAAWVGEELARRF---GLPYWQVATTATDAN----RFVLRWARAVTGR 156
Query: 125 PNKKKFIARQKSYHGS---TLI------AASLSGLPALHQKFDLPAPFVLHTDCPHYWRY 175
P K + YHG+ + GL L Q DL A
Sbjct: 157 P---KILVFNGCYHGTVDDVFVDLVDGRPVQRPGL--LGQVHDLTA-------------- 197
Query: 176 AHPGETEEEYSTRLA--NNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 231
+TR+ N+L L L +G +AA +AEP + G++ P + E ++
Sbjct: 198 ----------TTRVVEFNDLAALEAALADG--DVAAVLAEPAMTNIGMVLPEPGFHEALR 245
Query: 232 AVVKKYDILFIADE--VICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSP 289
+ ++Y L + DE I + G G + ++PD + K ++ +P S
Sbjct: 246 ELTRRYGTLLVIDETHTISS-GPGGY---TRAHGLEPDFLVVGKPIAGG-VPCAVYGFSA 300
Query: 290 EVSEVIHS--QSNTLGSFSHGFTYSGHPVSCAVAIEA 324
E++E + S G G T S + ++ A A+ A
Sbjct: 301 ELAERAQAAKASAPPGHSGIGTTLSANALAMA-AMRA 336
>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II.
Length = 357
Score = 42.7 bits (101), Expect = 3e-04
Identities = 36/147 (24%), Positives = 55/147 (37%), Gaps = 27/147 (18%)
Query: 191 NNLEDLI--LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 248
+ + L LKE E + G + EK+ + K+++IL + DE
Sbjct: 127 LDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEEL-EKLLDLAKEHNILLLVDE--- 182
Query: 249 AFGRLGTMFG-CDKYSIKPDL---------VSFAKALSSAYMPIGAILVSPEVSEVIHSQ 298
A+ G +FG D + + L SF+KA A +G IL + V
Sbjct: 183 AYA--GFVFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAAV------- 233
Query: 299 SNTLGSFSHGFTYSGHPVSCAVAIEAL 325
+ L + F S H A A AL
Sbjct: 234 ISQLRKLARPFYSSTH--LQAAAAAAL 258
>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold
type I) of pyridoxal phosphate (PLP)-dependent enzymes.
PLP combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine intermediate, which
depending on the reaction, is the substrate in four
kinds of reactions (1) transamination (movement of amino
groups), (2) racemization (redistribution of
enantiomers), (3) decarboxylation (removing COOH
groups), and (4) various side-chain reactions depending
on the enzyme involved. Pyridoxal phosphate (PLP)
dependent enzymes were previously classified into alpha,
beta and gamma classes, based on the chemical
characteristics (carbon atom involved) of the reaction
they catalyzed. The availability of several structures
allowed a comprehensive analysis of the evolutionary
classification of PLP dependent enzymes, and it was
found that the functional classification did not always
agree with the evolutionary history of these enzymes.
Structure and sequence analysis has revealed that the
PLP dependent enzymes can be classified into four major
groups of different evolutionary origin: aspartate
aminotransferase superfamily (fold type I), tryptophan
synthase beta superfamily (fold type II), alanine
racemase superfamily (fold type III), and D-amino acid
superfamily (fold type IV) and Glycogen phophorylase
family (fold type V).
Length = 170
Score = 39.3 bits (92), Expect = 0.001
Identities = 33/172 (19%), Positives = 57/172 (33%), Gaps = 39/172 (22%)
Query: 81 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGS 140
+L ++L + K F SG+ AN+ + AL P + I +
Sbjct: 4 ELEEKLARLLQPG-NDKAVFVPSGTGANEAALL-------ALLGP-GDEVIVDANGHGSR 54
Query: 141 TLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE 200
+AA L+G P P + G LE+L +
Sbjct: 55 YWVAAELAGAK--------PVPVP-------VDDAGYGGLDVAI--------LEEL---K 88
Query: 201 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 252
+A + P +GGV+ P +++ + K+Y IL + D
Sbjct: 89 AKPNVALIVITPNTTSGGVLVPLK----EIRKIAKEYGILLLVDAASAGGAS 136
>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family. This family
belongs to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). Pyridoxal
phosphate combines with an alpha-amino acid to form a
compound called a Schiff base or aldimine intermediate,
which depending on the reaction, is the substrate in
four kinds of reactions (1) transamination (movement of
amino groups), (2) racemization (redistribution of
enantiomers), (3) decarboxylation (removing COOH
groups), and (4) various side-chain reactions depending
on the enzyme involved. Pyridoxal phosphate (PLP)
dependent enzymes were previously classified into alpha,
beta and gamma classes, based on the chemical
characteristics (carbon atom involved) of the reaction
they catalyzed. The availability of several structures
allowed a comprehensive analysis of the evolutionary
classification of PLP dependent enzymes, and it was
found that the functional classification did not always
agree with the evolutionary history of these enzymes.
The major groups in this CD corresponds to Aspartate
aminotransferase a, b and c, Tyrosine, Alanine,
Aromatic-amino-acid, Glutamine phenylpyruvate,
1-Aminocyclopropane-1-carboxylate synthase,
Histidinol-phosphate, gene products of malY and cobC,
Valine-pyruvate aminotransferase and Rhizopine
catabolism regulatory protein.
Length = 350
Score = 33.9 bits (78), Expect = 0.16
Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 18/154 (11%)
Query: 218 GVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV----SFAK 273
G + E++ + KK+ IL I+DE G + V SF+K
Sbjct: 146 GAVLSEEE-LEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSK 204
Query: 274 ALSSAYMP---IGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 330
+P IG ++ PE E++ +T SG A A E
Sbjct: 205 TFG---LPGLRIGYLIAPPE--ELLERLKKL-----LPYTTSGPSTLSQAAAAAALDDGE 254
Query: 331 RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTG 364
++ E + + ++A + + ++ +G
Sbjct: 255 EHLEELRERYRRRRDALLEALKELGPLVVVKPSG 288
>gnl|CDD|216634 pfam01661, Macro, Macro domain. This domain is an ADP-ribose
binding module. It is found in a number of otherwise
unrelated proteins. It is found at the C-terminus of the
macro-H2A histone protein. This domain is found in the
non-structural proteins of several types of ssRNA
viruses such as NSP3 from alphaviruses. This domain is
also found on its own in a family of proteins from
bacteria, archaebacteria, and eukaryotes.
Length = 117
Score = 31.8 bits (73), Expect = 0.21
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 12/64 (18%)
Query: 157 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN---NLEDLILKEGPETIAAFIAEPV 213
+LPA +V+H P + H G EEE LA+ N +L + G ++IA P+
Sbjct: 50 GNLPAKYVIHAVGP---IWRHGGGEEEEEL--LASAYRNALELANELGIKSIAF----PL 100
Query: 214 IGAG 217
I G
Sbjct: 101 ISTG 104
>gnl|CDD|173322 PTZ00023, PTZ00023, glyceraldehyde-3-phosphate dehydrogenase;
Provisional.
Length = 337
Score = 31.7 bits (72), Expect = 0.72
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 90 FTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 127
F K + +F +G NDT VKLV +Y+N G N+
Sbjct: 288 FVHDKRSSIFDVKAGIALNDTFVKLVSWYDNEWGYSNR 325
>gnl|CDD|180537 PRK06348, PRK06348, aspartate aminotransferase; Provisional.
Length = 384
Score = 31.6 bits (72), Expect = 0.85
Identities = 38/158 (24%), Positives = 60/158 (37%), Gaps = 21/158 (13%)
Query: 180 ETEEEYSTRL-ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 238
ET EE ++ LE LI +T A + P G V E++ + +YD
Sbjct: 141 ETYEEDGFQINVKKLEALI---TSKTKAIILNSPNNPTGAVFSKET--LEEIAKIAIEYD 195
Query: 239 ILFIADEVICAFG------RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVS 292
+ I+DEV F + T+ G + +I SF+K + IG ++ +
Sbjct: 196 LFIISDEVYDGFSFYEDFVPMATLAGMPERTIT--FGSFSKDFAMTGWRIGYVIAPDYII 253
Query: 293 EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 330
E + G +S +S AI ALK
Sbjct: 254 ETAK-------IINEGICFSAPTISQRAAIYALKHRDT 284
>gnl|CDD|220540 pfam10050, DUF2284, Predicted metal-binding protein (DUF2284).
Members of this family of metal-binding hypothetical
bacterial proteins have no known function.
Length = 166
Score = 30.4 bits (69), Expect = 0.97
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 410 MMSPPFIMSPEEVDELISKYGKAL 433
PP++ P+E E++ +Y KAL
Sbjct: 31 WSCPPYVPDPDEFREILREYKKAL 54
>gnl|CDD|239233 cd02905, Macro_GDAP2_like, Macro domain, GDAP2_like family. The
macro domain is a high-affinity ADP-ribose binding
module found in a variety of proteins as a stand-alone
domain or in combination with other domains like in
histone macroH2A and some PARPs (poly ADP-ribose
polymerases). Some macro domains recognize poly
ADP-ribose as a ligand. Previously identified as
displaying an Appr-1"-p (ADP-ribose-1"-monophosphate)
processing activity, the macro domain may play roles in
distinct ADP-ribose pathways, such as the
ADP-ribosylation of proteins, an important
post-translational modification which occurs in DNA
repair, transcription, chromatin biology, and long-term
memory formation, among other processes. This family
contains proteins similar to human GDAP2, the
ganglioside induced differentiation associated protein
2, whose gene is expressed at a higher level in
differentiated Neuro2a cells compared with
non-differentiated cells. GDAP2 contains an N-terminal
macro domain and a C-terminal Sec14p-like lipid binding
domain. It is specifically expressed in brain and
testis.
Length = 140
Score = 30.4 bits (69), Expect = 0.98
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 157 FDLPAPFVLHTDCPHY 172
++LPA F++HT P Y
Sbjct: 65 YNLPARFIIHTVGPKY 80
>gnl|CDD|173415 PTZ00124, PTZ00124, adenosine deaminase; Provisional.
Length = 362
Score = 31.0 bits (70), Expect = 1.4
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 313 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPI 356
GH + A + E + + KE++I+ +V I+ + K+ PI
Sbjct: 251 GHGIRVAESQELIDMVKEKDILLEVCPISNVLLNNAKSMDTHPI 294
>gnl|CDD|222007 pfam13249, Prenyltrans_2, Prenyltransferase-like.
Length = 112
Score = 29.2 bits (66), Expect = 1.7
Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 278 AYMPIGAILVSPEVSEVIHSQSNTLGSF-SHGFTYSGHPVSCAVAIEALKIYKERNIVEQ 336
A +G + + SQ N G F + S S A A+ AL++ E
Sbjct: 33 ALAALGETPDVKKALAWLLSQQNPDGGFGYDPQSNSPDLSSTAYALAALELLGGEPDDEA 92
Query: 337 VNKIA 341
V K
Sbjct: 93 VEKAV 97
Score = 28.1 bits (63), Expect = 4.4
Identities = 10/43 (23%), Positives = 16/43 (37%)
Query: 295 IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV 337
+ SQ N G + A+A+ AL E V++
Sbjct: 4 LLSQQNPDGGWGAAVGGGSDVAMTALALLALAALGETPDVKKA 46
>gnl|CDD|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase;
Provisional.
Length = 1140
Score = 30.7 bits (70), Expect = 1.7
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Query: 239 ILFIADEVICAFGRLGTMFGCDKYSIKPD 267
+LF A + G +FG KYSI PD
Sbjct: 110 LLFAA---LFLMGIHSALFGPIKYSILPD 135
>gnl|CDD|216814 pfam01965, DJ-1_PfpI, DJ-1/PfpI family. The family includes the
protease PfpI. This domain is also found in
transcriptional regulators. This N-terminal region of
the full-length AdpA proteins is necessary for
dimerisation of the molecule.
Length = 142
Score = 29.6 bits (67), Expect = 1.8
Identities = 20/77 (25%), Positives = 25/77 (32%), Gaps = 15/77 (19%)
Query: 211 EPVIGAGGV--IPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL 268
+ V G G + T + V A YD L I G G + L
Sbjct: 11 KEVKGKNGKVKVRADKT-LDDVNA--DDYDALVIP----------GGHAGAEDLRDDEKL 57
Query: 269 VSFAKALSSAYMPIGAI 285
V F K + PI AI
Sbjct: 58 VKFVKEFYESGKPIAAI 74
>gnl|CDD|99744 cd06451, AGAT_like, Alanine-glyoxylate aminotransferase (AGAT)
family. This family belongs to pyridoxal phosphate
(PLP)-dependent aspartate aminotransferase superfamily
(fold I). The major groups in this CD correspond to
alanine-glyoxylate aminotransferase (AGAT),
serine-glyoxylate aminotransferase (SGAT), and
3-hydroxykynurenine transaminase (HKT). AGAT is a
homodimeric protein, which catalyses the transamination
of glyoxylate to glycine, and SGAT converts serine and
glyoxylate to hydroxypyruvate and glycine. HKT catalyzes
the PLP-dependent transamination of 3-hydroxykynurenine,
a potentially toxic metabolite of the kynurenine
pathway.
Length = 356
Score = 30.3 bits (69), Expect = 1.8
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 21/115 (18%)
Query: 202 PETIAAFIAEPVIGA---------GGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 252
PE IA + + I A GV+ P E + A+ KK+D L I D V + G
Sbjct: 113 PEEIAEALEQHDIKAVTLTHNETSTGVLNP----LEGIGALAKKHDALLIVDAV-SSLG- 166
Query: 253 LGTMFGCDKYSIKPDLVSFAKALSSAYMP--IGAILVSPEVSEVIHSQSNTLGSF 305
G F D++ + KAL + P +G I S E I ++ G +
Sbjct: 167 -GEPFRMDEWGVDVAYTGSQKALGA---PPGLGPIAFSERALERIKKKTKPKGFY 217
>gnl|CDD|225697 COG3155, ElbB, Uncharacterized protein involved in an early stage
of isoprenoid biosynthesis [Secondary metabolites
biosynthesis, transport, and catabolism].
Length = 217
Score = 29.8 bits (67), Expect = 2.0
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Query: 231 QAVVKKYDIL-----FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAI 285
QA ++ D L F A + + F G + S+ PDL + A+A+ A P+G +
Sbjct: 80 QADAEELDALIVPGGFGAAKNLSDFASKGA-----ECSVDPDLKALAQAMHQAGKPLGFM 134
Query: 286 LVSP 289
++P
Sbjct: 135 CIAP 138
>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional.
Length = 880
Score = 30.4 bits (69), Expect = 2.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 415 FIMSPEEVDELISKYGKALKATEERVKELKS 445
FI E ++ELI + K L+ + E+ S
Sbjct: 184 FIKRTENIEELIKEKEKELEEVLREINEISS 214
>gnl|CDD|184898 PRK14905, PRK14905, triosephosphate isomerase/PTS system
glucose/sucrose-specific transporter subunit IIB;
Provisional.
Length = 355
Score = 30.0 bits (67), Expect = 2.7
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 10/67 (14%)
Query: 179 GETEEEYSTRLANNLEDLILKEGPETIAA------FIA-EPV--IGAGGVIPPPATYFEK 229
GET E+ + +++ + LK G ++A FIA EPV IG GG IP A Y ++
Sbjct: 136 GETLEQKNYNISDEVLRTQLKIGLHGVSAEQLPHLFIAYEPVWAIGEGG-IPASAEYADE 194
Query: 230 VQAVVKK 236
A++K+
Sbjct: 195 KHAIIKQ 201
>gnl|CDD|218162 pfam04591, DUF596, Protein of unknown function, DUF596. This
family contains several uncharacterized proteins.
Length = 69
Score = 27.3 bits (61), Expect = 3.0
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 148 SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 185
PA ++ D T+CP + GE E+Y
Sbjct: 28 KSFPASDEEMDPDFGIWFFTECPAGAVWVFKGENGEDY 65
>gnl|CDD|236771 PRK10829, PRK10829, ribonuclease D; Provisional.
Length = 373
Score = 29.6 bits (67), Expect = 3.5
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 14/56 (25%)
Query: 281 PIGAILVSPEVSEVIHSQSNTLGSFSHGF--------------TYSGHPVSCAVAI 322
P A+L P+V++ +H+ S L F + F + G P+SC A
Sbjct: 65 PFKALLRDPQVTKFLHAGSEDLEVFLNAFGELPQPLIDTQILAAFCGRPLSCGFAS 120
>gnl|CDD|234609 PRK00068, PRK00068, hypothetical protein; Validated.
Length = 970
Score = 29.6 bits (67), Expect = 4.4
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 326 KIYKERNIVEQVNKIAP 342
KI R+ ++V K+AP
Sbjct: 562 KILFNRDPRDRVEKVAP 578
>gnl|CDD|179559 PRK03321, PRK03321, putative aminotransferase; Provisional.
Length = 352
Score = 28.8 bits (65), Expect = 5.7
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 391 FGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKEL 443
F A + G++VR +G+ + ++ I +PEE D L+A L
Sbjct: 309 FAAAAAEAGVVVRPFAGEGVRVT---IGAPEENDAF-------LRAARAWRAGL 352
>gnl|CDD|223694 COG0621, MiaB, 2-methylthioadenine synthetase [Translation,
ribosomal structure and biogenesis].
Length = 437
Score = 29.1 bits (66), Expect = 6.0
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 10/60 (16%)
Query: 177 HPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK 236
PGETEE++ DL+ + + + F P G P A ++V VKK
Sbjct: 306 FPGETEEDF-----EETLDLVEEVRFDRLHVFKYSPRPGT-----PAALMPDQVPEEVKK 355
>gnl|CDD|214894 smart00897, FIST, FIST N domain. The FIST N domain is a novel
sensory domain, which is present in signal transduction
proteins from Bacteria, Archaea and Eukarya. Chromosomal
proximity of FIST-encoding genes to those coding for
proteins involved in amino acid metabolism and transport
suggest that FIST domains bind small ligands, such as
amino acids.
Length = 196
Score = 28.4 bits (64), Expect = 6.3
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 5 FTAGWQSTDVHPLVIEKSEGSYVYDVNGK 33
T GW+ P V+ K+EG+ VY+++G+
Sbjct: 169 VTQGWRPIG-PPFVVTKAEGNVVYELDGE 196
>gnl|CDD|218390 pfam05028, PARG_cat, Poly (ADP-ribose) glycohydrolase (PARG).
Poly(ADP-ribose) glycohydrolase (PARG), is a
ubiquitously expressed exo- and endoglycohydrolase which
mediates oxidative and excitotoxic neuronal death.
Length = 339
Score = 28.8 bits (65), Expect = 6.6
Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 46/133 (34%)
Query: 290 EVSEVIHSQ--SNTLGSFSHGFTYSGHPV------------SCAVAIEALKI-------Y 328
E ++ ++ S+ G + F ++G V + VAI+AL Y
Sbjct: 205 EAIIIVGAERFSSYTG-YGSSFRFAGDYVDKTPRDSFGRRNTRIVAIDALHFGDPYDKQY 263
Query: 329 KERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIG 388
K+ +I+ ++NK F K+ P I TG WG G
Sbjct: 264 KQESILRELNKAFCGFLSPSKSSRPLPGI----ATGN-------------------WGCG 300
Query: 389 AYFGAQCEKHGML 401
A FG E ++
Sbjct: 301 A-FGGDPELKFLI 312
>gnl|CDD|236499 PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component;
Reviewed.
Length = 924
Score = 28.9 bits (66), Expect = 6.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 416 IMSPEEVDELISKYGKALKATEERVKELKSQQ 447
+++ EE DE++++Y AL A E VKE +
Sbjct: 489 VITEEEADEMVNEYRDALDAGFEVVKEWRPAD 520
>gnl|CDD|185323 PRK15425, gapA, glyceraldehyde-3-phosphate dehydrogenase A;
Provisional.
Length = 331
Score = 28.5 bits (63), Expect = 6.8
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 90 FTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 127
F VF +G ND VKLV +Y+N G NK
Sbjct: 284 FNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNK 321
>gnl|CDD|112128 pfam03299, TF_AP-2, Transcription factor AP-2.
Length = 207
Score = 28.2 bits (63), Expect = 7.1
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 9/75 (12%)
Query: 271 FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE 330
+ LS PI P++ + + + +HGF G P CAV + +L+
Sbjct: 141 LTELLSQDRPPITGSRPKPKLEPSLQNHLSHFSLITHGF---GSPAICAV-LRSLQ---- 192
Query: 331 RNIVEQVNKIAPKFQ 345
NI+ + K K
Sbjct: 193 -NIINEAAKYLDKLY 206
>gnl|CDD|240464 cd12884, SPRY_hnRNP, SPRY domain in heterogeneous nuclear
ribonucleoprotein U-like (hnRNP) protein 1. This
domain, consisting of the distinct N-terminal PRY
subdomain followed by the SPRY subdomain, is found at
the C-terminus of heterogeneous nuclear
ribonucleoprotein U-like (hnRNP) protein 1 (also known
as HNRPUL1 ) which is a major constituent of nuclear
matrix or scaffold and binds directly to DNA sequences
through the N-terminal acidic region named serum amyloid
P (SAP). Its function is specifically modulated by
E1B-55kDa in adenovirus-infected cells. HNRPUL1 also
participates in ATR protein kinase signaling pathways
during adenovirus infection. Two transcript variants
encoding different isoforms have been found for this
gene. When associated with bromodomain-containing
protein 7 (BRD7), it activates transcription of
glucocorticoid-responsive promoter in the absence of
ligand-stimulation.
Length = 176
Score = 27.9 bits (63), Expect = 7.9
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 8 GWQSTDVHPLVIEKSEGSYVYDVNGKKYLDS 38
GW S D L + + + SY Y GKK +
Sbjct: 75 GW-SVDSSSLQLGEEKLSYGYGSTGKKSTNG 104
>gnl|CDD|235158 PRK03761, PRK03761, LPS assembly outer membrane complex protein
LptD; Provisional.
Length = 778
Score = 28.7 bits (65), Expect = 8.3
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 5/37 (13%)
Query: 6 TAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGL 42
A W D +V G+Y YD K + L GL
Sbjct: 682 VASWPIADRWSIV-----GAYYYDTKANKPAEQLLGL 713
>gnl|CDD|236980 PRK11780, PRK11780, isoprenoid biosynthesis protein with
amidotransferase-like domain; Provisional.
Length = 217
Score = 27.8 bits (63), Expect = 9.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 263 SIKPDLVSFAKALSSAYMPIGAILVSP 289
++ PD+ + +A A PIG I ++P
Sbjct: 112 TVNPDVKALVRAFHQAGKPIGFICIAP 138
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.317 0.134 0.403
Gapped
Lambda K H
0.267 0.0728 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 23,286,336
Number of extensions: 2302268
Number of successful extensions: 3109
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2751
Number of HSP's successfully gapped: 142
Length of query: 447
Length of database: 10,937,602
Length adjustment: 100
Effective length of query: 347
Effective length of database: 6,502,202
Effective search space: 2256264094
Effective search space used: 2256264094
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (27.3 bits)