Your job contains 1 sequence.
>013207
MGQQPREDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGD
LFHENKPSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLP
VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVA
LYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEH
FLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKEN
QYRPTKIPLTSVRPFEYTEIILKDEADIDPDDQNSILEHLDKVVRNLIERSSKKTVNRSE
LKLPLVRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKSSKKSKAEAKIDDFERLR
PEELNQQNIEALVAENNLVLHDYFPLP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013207
(447 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2162615 - symbol:MRE11 "MEIOTIC RECOMBINATION ... 2063 1.8e-213 1
DICTYBASE|DDB_G0293546 - symbol:mre11 "DNA repair exonucl... 1149 1.3e-116 1
ZFIN|ZDB-GENE-040426-2638 - symbol:mre11a "meiotic recomb... 985 3.1e-99 1
UNIPROTKB|F1STJ9 - symbol:MRE11A "Uncharacterized protein... 982 6.4e-99 1
UNIPROTKB|E2RTK8 - symbol:MRE11A "Uncharacterized protein... 978 1.7e-98 1
UNIPROTKB|B3KTC7 - symbol:MRE11A "Double-strand break rep... 976 2.8e-98 1
UNIPROTKB|F8W7U8 - symbol:MRE11A "Double-strand break rep... 976 2.8e-98 1
UNIPROTKB|P49959 - symbol:MRE11A "Double-strand break rep... 976 2.8e-98 1
UNIPROTKB|E1BIN9 - symbol:MRE11A "Uncharacterized protein... 974 4.5e-98 1
UNIPROTKB|F1PUK4 - symbol:MRE11A "Uncharacterized protein... 972 7.4e-98 1
MGI|MGI:1100512 - symbol:Mre11a "meiotic recombination 11... 950 1.6e-95 1
UNIPROTKB|F1N9H0 - symbol:MRE11A "Uncharacterized protein... 949 2.0e-95 1
UNIPROTKB|F1NYL0 - symbol:MRE11A "Uncharacterized protein... 948 2.6e-95 1
RGD|69263 - symbol:Mre11a "MRE11 meiotic recombination 11... 948 2.6e-95 1
UNIPROTKB|Q9JIM0 - symbol:Mre11a "Double-strand break rep... 948 2.6e-95 1
UNIPROTKB|Q9IAM7 - symbol:MRE11 "Double-strand break repa... 935 6.1e-94 1
FB|FBgn0020270 - symbol:mre11 "meiotic recombination 11" ... 914 1.0e-91 1
POMBASE|SPAC13C5.07 - symbol:mre11 "Mre11 nuclease" speci... 877 8.6e-88 1
CGD|CAL0000164 - symbol:MRE11 species:5476 "Candida albic... 832 5.0e-83 1
UNIPROTKB|Q59S37 - symbol:MRE11 "Putative uncharacterized... 832 5.0e-83 1
WB|WBGene00003405 - symbol:mre-11 species:6239 "Caenorhab... 789 1.8e-78 1
SGD|S000004837 - symbol:MRE11 "Subunit of the MRX complex... 748 4.0e-74 1
UNIPROTKB|F5GXT0 - symbol:MRE11A "Double-strand break rep... 645 3.3e-63 1
UNIPROTKB|F5H256 - symbol:MRE11A "Double-strand break rep... 398 4.9e-37 1
UNIPROTKB|F5H742 - symbol:MRE11A "Double-strand break rep... 341 5.4e-31 1
UNIPROTKB|Q8U1N9 - symbol:mre11 "DNA double-strand break ... 148 3.4e-08 2
TIGR_CMR|GSU_1724 - symbol:GSU_1724 "nuclease SbcCD, D su... 89 0.00019 2
>TAIR|locus:2162615 [details] [associations]
symbol:MRE11 "MEIOTIC RECOMBINATION 11" species:3702
"Arabidopsis thaliana" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0004722 "protein serine/threonine phosphatase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030145 "manganese ion binding" evidence=IEA]
[GO:0000785 "chromatin" evidence=IDA] [GO:0000791 "euchromatin"
evidence=IDA] [GO:0000795 "synaptonemal complex" evidence=IDA]
InterPro:IPR003701 InterPro:IPR004843 InterPro:IPR007281
Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882 GO:GO:0007126
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030145 GO:GO:0004527
GO:GO:0006302 GO:GO:0090305 EMBL:AB010695 GO:GO:0004519
GO:GO:0000795 GO:GO:0000791 EMBL:AJ243822 IPI:IPI00542175
PIR:T52564 RefSeq:NP_200237.1 UniGene:At.493
ProteinModelPortal:Q9XGM2 SMR:Q9XGM2 STRING:Q9XGM2 PaxDb:Q9XGM2
PRIDE:Q9XGM2 EnsemblPlants:AT5G54260.1 GeneID:835514
KEGG:ath:AT5G54260 GeneFarm:4831 TAIR:At5g54260 eggNOG:COG0420
HOGENOM:HOG000216581 InParanoid:Q9XGM2 KO:K10865 OMA:FVNKQVT
PhylomeDB:Q9XGM2 ProtClustDB:CLSN2686743 Genevestigator:Q9XGM2
GermOnline:AT5G54260 PANTHER:PTHR10139 TIGRFAMs:TIGR00583
Uniprot:Q9XGM2
Length = 720
Score = 2063 (731.3 bits), Expect = 1.8e-213, P = 1.8e-213
Identities = 384/433 (88%), Positives = 412/433 (95%)
Query: 6 REDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHEN 65
RED ++T+R+LVATDCHLGYMEKDEIRRHDSF+AFEEICSIAE+K+VDF+LLGGDLFHEN
Sbjct: 3 REDFSDTLRVLVATDCHLGYMEKDEIRRHDSFKAFEEICSIAEEKQVDFLLLGGDLFHEN 62
Query: 66 KPSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIH 125
KPSR+TLVKAIEILRRHCLND+PVQFQVVSDQ VNFQN FG VNYEDPHFNVGLPVFSIH
Sbjct: 63 KPSRTTLVKAIEILRRHCLNDKPVQFQVVSDQTVNFQNAFGQVNYEDPHFNVGLPVFSIH 122
Query: 126 GNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLG 185
GNHDDPAGVDNLSA+DILSACNLVNYFGKMVLGGSGVG+IT+YPIL++KGST VALYGLG
Sbjct: 123 GNHDDPAGVDNLSAIDILSACNLVNYFGKMVLGGSGVGQITLYPILMKKGSTTVALYGLG 182
Query: 186 NIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRF 245
NIRDERLNRMFQTPHAVQWMRPE QE C VSDWFNILVLHQNRVK+NPKNAI+EHFLPRF
Sbjct: 183 NIRDERLNRMFQTPHAVQWMRPEVQEGCDVSDWFNILVLHQNRVKSNPKNAISEHFLPRF 242
Query: 246 LDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPT 305
LDF+VWGHEHECLIDPQEV GMGFH+TQPGSSVATSLI+GESKPKHVLLLEIK NQYRPT
Sbjct: 243 LDFIVWGHEHECLIDPQEVSGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPT 302
Query: 306 KIPLTSVRPFEYTEIILKDEADIDPDDQNSILEHLDKVVRNLIERSSKKTVNRSELKLPL 365
KIPLTSVRPFEYTEI+LKDE+DIDP+DQNSILEHLDKVVRNLIE++SKK VNRSE+KLPL
Sbjct: 303 KIPLTSVRPFEYTEIVLKDESDIDPNDQNSILEHLDKVVRNLIEKASKKAVNRSEIKLPL 362
Query: 366 VRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFXXXXXXXXAEAKIDDFERLRPEELN 425
VRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIF +EA IDD ERLRPEELN
Sbjct: 363 VRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASKKGRSEANIDDSERLRPEELN 422
Query: 426 QQNIEALVAENNL 438
QQNIEALVAE+NL
Sbjct: 423 QQNIEALVAESNL 435
>DICTYBASE|DDB_G0293546 [details] [associations]
symbol:mre11 "DNA repair exonuclease" species:44689
"Dictyostelium discoideum" [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=ISS] [GO:0030145 "manganese
ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA;ISS] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA;ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0030870 "Mre11 complex" evidence=ISS] [GO:0008408
"3'-5' exonuclease activity" evidence=ISS] [GO:0090305 "nucleic
acid phosphodiester bond hydrolysis" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 dictyBase:DDB_G0293546 GO:GO:0007126
GO:GO:0042803 GenomeReviews:CM000155_GR GO:GO:0030145 GO:GO:0004519
GO:GO:0008408 EMBL:AAFI02000218 GO:GO:0006303 eggNOG:COG0420
KO:K10865 PANTHER:PTHR10139 TIGRFAMs:TIGR00583 GO:GO:0030870
RefSeq:XP_628997.1 ProteinModelPortal:Q54BN2 STRING:Q54BN2
EnsemblProtists:DDB0232403 GeneID:8629281 KEGG:ddi:DDB_G0293546
InParanoid:Q54BN2 OMA:GYSTINP ProtClustDB:CLSZ2728681
Uniprot:Q54BN2
Length = 689
Score = 1149 (409.5 bits), Expect = 1.3e-116, P = 1.3e-116
Identities = 220/392 (56%), Positives = 294/392 (75%)
Query: 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRS 70
N +RILVATD HLGY+E+D IR DSF +FEEI A +VD VLLGGDLFH+NKPSRS
Sbjct: 41 NIMRILVATDNHLGYLERDPIRGDDSFNSFEEILKYAHTLKVDMVLLGGDLFHDNKPSRS 100
Query: 71 TLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDD 130
L + +E+ R++CL D PV+ Q +SDQ+VNF N+F VNYEDP+FN+ LP+FSIHGNHDD
Sbjct: 101 CLYRTMELFRKYCLGDSPVRIQFLSDQSVNFSNQFHTVNYEDPNFNISLPIFSIHGNHDD 160
Query: 131 PAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGNIRDE 190
P G L+A+D+LS NLVNYFGK + +ITVYP+L+ KG T +A+YGLGNIRDE
Sbjct: 161 PTGEGGLAALDLLSVSNLVNYFGKT----EDIDDITVYPLLLGKGETKIAIYGLGNIRDE 216
Query: 191 RLNRMFQTPHAVQWMRP-EAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFLDFV 249
RL+R FQ +V+ MRP E+++E WFNILVLHQNRV NPKN ++E + F+DFV
Sbjct: 217 RLHRTFQK-QSVKLMRPVESKDE-----WFNILVLHQNRVAHNPKNYVHEKMIESFIDFV 270
Query: 250 VWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPL 309
+WGHEHECL++PQ FH++QPGSSVAT+L EGESK K V LLE+ +NQ+R PL
Sbjct: 271 LWGHEHECLVNPQASSVGEFHISQPGSSVATALSEGESKDKFVGLLEVYKNQFRFKPFPL 330
Query: 310 TSVRPFEYTEIILKDEADIDPDDQNSILEHLDKVVRNLIERSSKKTVNR-SELKLPLVRI 368
+VRPF +IIL + ++I P QN +++ +++ V ++IE++ K+ + +E LPL+R+
Sbjct: 331 NTVRPFIMDQIILAN-SNIHPTQQNDVIQWIEQKVESMIEQAKLKSQGKPNESMLPLIRL 389
Query: 369 KVDYSGFMTINPQRFGQKYVGKVANPQDILIF 400
KVDY+G+ TINPQ+FGQ++ G+VANP D+L+F
Sbjct: 390 KVDYTGYSTINPQKFGQRFQGRVANPNDVLLF 421
>ZFIN|ZDB-GENE-040426-2638 [details] [associations]
symbol:mre11a "meiotic recombination 11 homolog A
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0030145
"manganese ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] InterPro:IPR003701 InterPro:IPR004843
InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882
ZFIN:ZDB-GENE-040426-2638 GO:GO:0005634 GO:GO:0007126 GO:GO:0030145
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
PANTHER:PTHR10139 TIGRFAMs:TIGR00583 GeneTree:ENSGT00390000017288
EMBL:CABZ01086029 EMBL:CABZ01086030 EMBL:CABZ01086031
EMBL:CABZ01086032 EMBL:CABZ01086033 EMBL:CABZ01086034
EMBL:CABZ01086035 EMBL:CABZ01086036 EMBL:CABZ01086037
EMBL:CABZ01086038 EMBL:CU914486 IPI:IPI00509459
Ensembl:ENSDART00000004840 Ensembl:ENSDART00000128572
Uniprot:F1R0G2
Length = 619
Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
Identities = 206/439 (46%), Positives = 281/439 (64%)
Query: 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKP 67
D +T +IL+ATD HLGY+EKD IR +D+F F+EI A Q EVDFVLLGGDLFH+NKP
Sbjct: 9 DDEDTFKILIATDIHLGYLEKDAIRGNDTFVTFDEIMKQAMQNEVDFVLLGGDLFHDNKP 68
Query: 68 SRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQN-KFGHVNYEDPHFNVGLPVFSIHG 126
SR T+ +E++R++C+ DRP+ F+++SDQAVNF + +F VNY D + N+ +P+FS+HG
Sbjct: 69 SRKTMHSCMEVMRKYCMGDRPIIFEIISDQAVNFSHSRFPWVNYLDDNLNISIPIFSVHG 128
Query: 127 NHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGN 186
NHDDP G D L AVD+LS LVN+FG+ V ++ + P+L++KG T +ALYGLG+
Sbjct: 129 NHDDPTGSDGLCAVDLLSCAGLVNHFGR----SRSVEKVEISPVLLQKGDTRIALYGLGS 184
Query: 187 IRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFL 246
I DERL RMF + V +RP E+ WFN+ V+HQNR K N I E FL FL
Sbjct: 185 IPDERLYRMFVN-NQVTMLRPREDED----GWFNLFVIHQNRSKHGATNYIPEQFLDDFL 239
Query: 247 DFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTK 306
D VVWGHEHEC I P F++TQPGSSV TSL GE+ KH+ LL +K + K
Sbjct: 240 DLVVWGHEHECKIAPVRNEQQLFYVTQPGSSVITSLSPGEAVKKHIGLLRVKGKKMNLQK 299
Query: 307 IPLTSVRPFEYTEIILKDEADI-DPDDQNSILE---HLDKVVRNLIERSSKKTVNRSEL- 361
IPL +VR F +++L D ++ P+ N++L+ + V ++E + ++ + ++
Sbjct: 300 IPLQTVRQFFIQDVVLSDYPELFSPEQPNTMLKVQAFCQEKVEEMLEEAERERLGNPQIP 359
Query: 362 KLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDILIFXXXXXXXXAEAKID-DFERL 419
+ PL+R++VDYSG F N RF QK+V KVANP+DIL F D DFE L
Sbjct: 360 EKPLIRLRVDYSGGFEVFNTMRFSQKFVDKVANPKDILHFVRHRETKGNIKDEDVDFEAL 419
Query: 420 --RP-EELNQQNIEALVAE 435
RP E+ Q +E LV E
Sbjct: 420 FSRPTSEVLQLRVEDLVKE 438
>UNIPROTKB|F1STJ9 [details] [associations]
symbol:MRE11A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033674 "positive regulation of kinase activity"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0031954 "positive regulation
of protein autophosphorylation" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0007129 "synapsis" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000075 "cell
cycle checkpoint" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA]
InterPro:IPR003701 InterPro:IPR004843 InterPro:IPR007281
Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882 GO:GO:0005634
GO:GO:0003677 GO:GO:0008283 GO:GO:0030145 GO:GO:0004003
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
GO:GO:0032876 GO:GO:0000781 GO:GO:0000075 GO:GO:0007129
GO:GO:0007062 GO:GO:0031954 KO:K10865 OMA:FVNKQVT PANTHER:PTHR10139
TIGRFAMs:TIGR00583 GeneTree:ENSGT00390000017288 CTD:4361
GO:GO:0033674 EMBL:FP236710 RefSeq:XP_003129836.1
Ensembl:ENSSSCT00000016316 GeneID:100516687 KEGG:ssc:100516687
Uniprot:F1STJ9
Length = 714
Score = 982 (350.7 bits), Expect = 6.4e-99, P = 6.4e-99
Identities = 203/403 (50%), Positives = 275/403 (68%)
Query: 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKP 67
D NT +ILVATD HLG+MEKD IR +D+F +EI +A++ +VDF+LLGGDLFHENKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAIRGNDTFATLDEILGLAQENDVDFILLGGDLFHENKP 67
Query: 68 SRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFSIHG 126
SR TL +E+LR++C+ DRPVQF+++SDQ+VNF +KF VNY+D + N+ +PVFSIHG
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEIISDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 127
Query: 127 NHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGN 186
NHDDP G D+L A+DILS L+N+FG+ + V +I + P+L++KGST VALYGLG+
Sbjct: 128 NHDDPTGADSLCALDILSCAGLINHFGRSM----SVEKIDISPVLLQKGSTKVALYGLGS 183
Query: 187 IRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFL 246
I DERL RMF V +RP+ E + WFN+ VLHQNR + N I E FL FL
Sbjct: 184 IPDERLYRMFINKK-VTMLRPKEDE----NSWFNLFVLHQNRSRHGRTNFIPEQFLDDFL 238
Query: 247 DFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTK 306
D V+WGHEHEC I P + F+++QPGSSV TSL GE+ KHV LL IK + K
Sbjct: 239 DLVIWGHEHECKIAPTKNEQQLFYVSQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMQK 298
Query: 307 IPLTSVRPFEYTEIILKDEADI-DPDD-------QNSILEHLDKVVRNLIERSSKKTVNR 358
IPL +VR F +++L D DI +PD+ Q+ LE +++++ N ER ++ N
Sbjct: 299 IPLHTVRQFFMEDVVLADHPDIFNPDNPKVTQVIQSFCLEKIEEILENA-ER--ERLGNS 355
Query: 359 SELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDILIF 400
+ + PL+R++VDYSG F + RF QK+V +VANP+DI+ F
Sbjct: 356 RQPEKPLIRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDIIHF 398
>UNIPROTKB|E2RTK8 [details] [associations]
symbol:MRE11A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007126 "meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 GO:GO:0005634 GO:GO:0007126 GO:GO:0030145
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
PANTHER:PTHR10139 TIGRFAMs:TIGR00583 GeneTree:ENSGT00390000017288
EMBL:AAEX03012721 Ensembl:ENSCAFT00000006686 Uniprot:E2RTK8
Length = 708
Score = 978 (349.3 bits), Expect = 1.7e-98, P = 1.7e-98
Identities = 200/437 (45%), Positives = 282/437 (64%)
Query: 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKP 67
D NT +ILVATD HLG+MEKD +R +D++ +EI +A++ EVDF+LLGGDLFHENKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAVRGNDTYVTLDEILRLAQENEVDFILLGGDLFHENKP 67
Query: 68 SRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFSIHG 126
SR TL +E+LR++C+ DRPVQF+++SDQ+VNF +KF VNY+D + N+ +PVFSIHG
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 127
Query: 127 NHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGN 186
NHDDP G D L A+D+LS VN+FG+ + V +I + P+L++KGST +ALYGLG+
Sbjct: 128 NHDDPTGADALCALDVLSCAGFVNHFGRSM----SVEKIDISPVLLQKGSTKIALYGLGS 183
Query: 187 IRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFL 246
I DERL RMF V +RP+ E + WFN+ V+HQNR K N I E FL F+
Sbjct: 184 IPDERLYRMFVNKK-VTMLRPKEDE----NSWFNLFVIHQNRSKHGNTNFIPEQFLDDFI 238
Query: 247 DFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTK 306
D V+WGHEHEC I P + F+++QPGSSV TSL GE+ KHV LL IK + K
Sbjct: 239 DLVIWGHEHECKIAPTKNEQQLFYVSQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMQK 298
Query: 307 IPLTSVRPFEYTEIILKDEADIDPDDQNSILEHLDKV----VRNLIERSSKKTVNRSEL- 361
IPL +VR F +++L D +I D + + L K ++ ++E + ++ + S+
Sbjct: 299 IPLNTVRQFFMEDVVLADHPEIFNPDMQKLTDKLKKYFYFEIKEMLENAERERLGNSQQP 358
Query: 362 KLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDILIFXXXXXXXXAEAKIDDFERL- 419
+ PL+R++VDYSG F + RF QK+V +VANP+D++ F + +F +L
Sbjct: 359 EKPLIRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDVIHFFRHREQKEKTGEEINFGKLI 418
Query: 420 -RPEELNQQNIEALVAE 435
+P E +E LV +
Sbjct: 419 TKPSEGTTLRVEDLVKQ 435
>UNIPROTKB|B3KTC7 [details] [associations]
symbol:MRE11A "Double-strand break repair protein MRE11A"
species:9606 "Homo sapiens" [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0030145 "manganese ion binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 GO:GO:0005634 GO:GO:0007126 GO:GO:0030145
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
HOGENOM:HOG000216581 OMA:FVNKQVT PANTHER:PTHR10139
TIGRFAMs:TIGR00583 HOVERGEN:HBG052508 UniGene:Hs.192649
HGNC:HGNC:7230 ChiTaRS:MRE11A EMBL:AP000765 EMBL:AP000786
EMBL:AK095388 IPI:IPI00029159 SMR:B3KTC7 STRING:B3KTC7
Ensembl:ENST00000407439 UCSC:uc009ywj.2 Uniprot:B3KTC7
Length = 711
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 209/440 (47%), Positives = 286/440 (65%)
Query: 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKP 67
D NT +ILVATD HLG+MEKD +R +D+F +EI +A++ EVDF+LLGGDLFHENKP
Sbjct: 11 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKP 70
Query: 68 SRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFSIHG 126
SR TL +E+LR++C+ DRPVQF+++SDQ+VNF +KF VNY+D + N+ +PVFSIHG
Sbjct: 71 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 130
Query: 127 NHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGN 186
NHDDP G D L A+DILS VN+FG+ + V +I + P+L++KGST +ALYGLG+
Sbjct: 131 NHDDPTGADALCALDILSCAGFVNHFGRSM----SVEKIDISPVLLQKGSTKIALYGLGS 186
Query: 187 IRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFL 246
I DERL RMF V +RP+ E + WFN+ V+HQNR K N I E FL F+
Sbjct: 187 IPDERLYRMFVNKK-VTMLRPKEDE----NSWFNLFVIHQNRSKHGSTNFIPEQFLDDFI 241
Query: 247 DFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTK 306
D V+WGHEHEC I P + F+++QPGSSV TSL GE+ KHV LL IK + K
Sbjct: 242 DLVIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHK 301
Query: 307 IPLTSVRPFEYTEIILKDEADI-DPDD-------QNSILEHLDKVVRNLIERSSKKTVNR 358
IPL +VR F +I+L + DI +PD+ Q+ LE +++++ N ER ++ N
Sbjct: 302 IPLHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENA-ER--ERLGNS 358
Query: 359 SELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDILIFXXXXXXXXAEAKIDDFE 417
+ + PLVR++VDYSG F + RF QK+V +VANP+DI+ F + +F
Sbjct: 359 HQPEKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDIIHFFRHREQKEKTGEEINFG 418
Query: 418 RL--RPEELNQQNIEALVAE 435
+L +P E +E LV +
Sbjct: 419 KLITKPSEGTTLRVEDLVKQ 438
>UNIPROTKB|F8W7U8 [details] [associations]
symbol:MRE11A "Double-strand break repair protein MRE11A"
species:9606 "Homo sapiens" [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0030145 "manganese ion binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 GO:GO:0005634 GO:GO:0007126 GO:GO:0030145
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
PANTHER:PTHR10139 TIGRFAMs:TIGR00583 HGNC:HGNC:7230 ChiTaRS:MRE11A
EMBL:AP000765 EMBL:AP000786 IPI:IPI01011534
ProteinModelPortal:F8W7U8 SMR:F8W7U8 PRIDE:F8W7U8
Ensembl:ENST00000393241 ArrayExpress:F8W7U8 Bgee:F8W7U8
Uniprot:F8W7U8
Length = 707
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 209/440 (47%), Positives = 286/440 (65%)
Query: 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKP 67
D NT +ILVATD HLG+MEKD +R +D+F +EI +A++ EVDF+LLGGDLFHENKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKP 67
Query: 68 SRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFSIHG 126
SR TL +E+LR++C+ DRPVQF+++SDQ+VNF +KF VNY+D + N+ +PVFSIHG
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 127
Query: 127 NHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGN 186
NHDDP G D L A+DILS VN+FG+ + V +I + P+L++KGST +ALYGLG+
Sbjct: 128 NHDDPTGADALCALDILSCAGFVNHFGRSM----SVEKIDISPVLLQKGSTKIALYGLGS 183
Query: 187 IRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFL 246
I DERL RMF V +RP+ E + WFN+ V+HQNR K N I E FL F+
Sbjct: 184 IPDERLYRMFVNKK-VTMLRPKEDE----NSWFNLFVIHQNRSKHGSTNFIPEQFLDDFI 238
Query: 247 DFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTK 306
D V+WGHEHEC I P + F+++QPGSSV TSL GE+ KHV LL IK + K
Sbjct: 239 DLVIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHK 298
Query: 307 IPLTSVRPFEYTEIILKDEADI-DPDD-------QNSILEHLDKVVRNLIERSSKKTVNR 358
IPL +VR F +I+L + DI +PD+ Q+ LE +++++ N ER ++ N
Sbjct: 299 IPLHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENA-ER--ERLGNS 355
Query: 359 SELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDILIFXXXXXXXXAEAKIDDFE 417
+ + PLVR++VDYSG F + RF QK+V +VANP+DI+ F + +F
Sbjct: 356 HQPEKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDIIHFFRHREQKEKTGEEINFG 415
Query: 418 RL--RPEELNQQNIEALVAE 435
+L +P E +E LV +
Sbjct: 416 KLITKPSEGTTLRVEDLVKQ 435
>UNIPROTKB|P49959 [details] [associations]
symbol:MRE11A "Double-strand break repair protein MRE11A"
species:9606 "Homo sapiens" [GO:0030145 "manganese ion binding"
evidence=IEA] [GO:0000075 "cell cycle checkpoint" evidence=IEA]
[GO:0007129 "synapsis" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007131 "reciprocal meiotic recombination" evidence=TAS]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=TAS] [GO:0000019 "regulation of mitotic
recombination" evidence=TAS] [GO:0003690 "double-stranded DNA
binding" evidence=TAS] [GO:0004520 "endodeoxyribonuclease activity"
evidence=TAS] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=TAS] [GO:0006310 "DNA
recombination" evidence=TAS] [GO:0007004 "telomere maintenance via
telomerase" evidence=TAS] [GO:0008408 "3'-5' exonuclease activity"
evidence=TAS] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] [GO:0030870 "Mre11 complex" evidence=NAS;IDA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006302
"double-strand break repair" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0000781 "chromosome,
telomeric region" evidence=IDA] [GO:0031954 "positive regulation of
protein autophosphorylation" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0033674 "positive regulation of kinase
activity" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
evidence=IMP] [GO:0004518 "nuclease activity" evidence=TAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=TAS] Reactome:REACT_216 InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 GO:GO:0048471
Pathway_Interaction_DB:telomerasepathway GO:GO:0005654
GO:GO:0007507 GO:GO:0008283 GO:GO:0030145 GO:GO:0000790
Reactome:REACT_111183 GO:GO:0003690 GO:GO:0000724 GO:GO:0000794
GO:GO:0032876 GO:GO:0008408 Pathway_Interaction_DB:bard1pathway
GO:GO:0007131 GO:GO:0006303 GO:GO:0000075 GO:GO:0007004
Orphanet:145 GO:GO:0000014 GO:GO:0007129 GO:GO:0032508
GO:GO:0007062 GO:GO:0031954 eggNOG:COG0420 HOGENOM:HOG000216581
KO:K10865 PANTHER:PTHR10139 TIGRFAMs:TIGR00583 CTD:4361
HOVERGEN:HBG052508 EMBL:U37359 EMBL:AF022778 EMBL:AF073362
EMBL:AF303395 EMBL:AF303379 EMBL:AF303380 EMBL:AF303381
EMBL:AF303382 EMBL:AF303383 EMBL:AF303384 EMBL:AF303385
EMBL:AF303386 EMBL:AF303387 EMBL:AF303388 EMBL:AF303389
EMBL:AF303390 EMBL:AF303391 EMBL:AF303392 EMBL:AF303393
EMBL:AF303394 EMBL:AY584241 EMBL:BC063458 IPI:IPI00218853
IPI:IPI00940798 RefSeq:NP_005581.2 RefSeq:NP_005582.1
UniGene:Hs.192649 PDB:3T1I PDBsum:3T1I ProteinModelPortal:P49959
SMR:P49959 DIP:DIP-33238N IntAct:P49959 MINT:MINT-131851
STRING:P49959 PhosphoSite:P49959 DMDM:17380137 PaxDb:P49959
PRIDE:P49959 DNASU:4361 Ensembl:ENST00000323929
Ensembl:ENST00000323977 GeneID:4361 KEGG:hsa:4361 UCSC:uc001peu.2
UCSC:uc001pev.2 GeneCards:GC11M094150 HGNC:HGNC:7230 HPA:CAB004081
HPA:HPA002691 MIM:600814 MIM:604391 neXtProt:NX_P49959
Orphanet:251347 PharmGKB:PA30934 InParanoid:P49959 PhylomeDB:P49959
ChiTaRS:MRE11A GenomeRNAi:4361 NextBio:17163 PMAP-CutDB:P49959
ArrayExpress:P49959 Bgee:P49959 CleanEx:HS_MRE11A
Genevestigator:P49959 GermOnline:ENSG00000020922 GO:GO:0030870
GO:GO:0033674 GO:GO:0000019 Uniprot:P49959
Length = 708
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 209/440 (47%), Positives = 286/440 (65%)
Query: 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKP 67
D NT +ILVATD HLG+MEKD +R +D+F +EI +A++ EVDF+LLGGDLFHENKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKP 67
Query: 68 SRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFSIHG 126
SR TL +E+LR++C+ DRPVQF+++SDQ+VNF +KF VNY+D + N+ +PVFSIHG
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 127
Query: 127 NHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGN 186
NHDDP G D L A+DILS VN+FG+ + V +I + P+L++KGST +ALYGLG+
Sbjct: 128 NHDDPTGADALCALDILSCAGFVNHFGRSM----SVEKIDISPVLLQKGSTKIALYGLGS 183
Query: 187 IRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFL 246
I DERL RMF V +RP+ E + WFN+ V+HQNR K N I E FL F+
Sbjct: 184 IPDERLYRMFVNKK-VTMLRPKEDE----NSWFNLFVIHQNRSKHGSTNFIPEQFLDDFI 238
Query: 247 DFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTK 306
D V+WGHEHEC I P + F+++QPGSSV TSL GE+ KHV LL IK + K
Sbjct: 239 DLVIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHK 298
Query: 307 IPLTSVRPFEYTEIILKDEADI-DPDD-------QNSILEHLDKVVRNLIERSSKKTVNR 358
IPL +VR F +I+L + DI +PD+ Q+ LE +++++ N ER ++ N
Sbjct: 299 IPLHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENA-ER--ERLGNS 355
Query: 359 SELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDILIFXXXXXXXXAEAKIDDFE 417
+ + PLVR++VDYSG F + RF QK+V +VANP+DI+ F + +F
Sbjct: 356 HQPEKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDIIHFFRHREQKEKTGEEINFG 415
Query: 418 RL--RPEELNQQNIEALVAE 435
+L +P E +E LV +
Sbjct: 416 KLITKPSEGTTLRVEDLVKQ 435
>UNIPROTKB|E1BIN9 [details] [associations]
symbol:MRE11A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033674 "positive regulation of kinase activity"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0031954 "positive regulation
of protein autophosphorylation" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0007129 "synapsis" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000075 "cell
cycle checkpoint" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA]
InterPro:IPR003701 InterPro:IPR004843 InterPro:IPR007281
Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882 GO:GO:0005634
GO:GO:0003677 GO:GO:0008283 GO:GO:0030145 GO:GO:0004003
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
GO:GO:0032876 GO:GO:0000781 GO:GO:0000075 GO:GO:0007129
GO:GO:0007062 GO:GO:0031954 KO:K10865 OMA:FVNKQVT PANTHER:PTHR10139
TIGRFAMs:TIGR00583 GeneTree:ENSGT00390000017288 CTD:4361
GO:GO:0033674 EMBL:DAAA02039761 EMBL:DAAA02039762 EMBL:DAAA02039763
EMBL:DAAA02039764 EMBL:DAAA02039765 IPI:IPI00695059
RefSeq:NP_001179534.1 UniGene:Bt.28672 Ensembl:ENSBTAT00000011748
GeneID:525093 KEGG:bta:525093 NextBio:20874093 Uniprot:E1BIN9
Length = 708
Score = 974 (347.9 bits), Expect = 4.5e-98, P = 4.5e-98
Identities = 202/438 (46%), Positives = 286/438 (65%)
Query: 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKP 67
D NT +ILVATD HLG+MEKD +R +D+F +EI +A++ +VDF+LLGGDLFHENKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENDVDFILLGGDLFHENKP 67
Query: 68 SRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFSIHG 126
SR TL +E+LR++C+ DRPVQF+++SDQ+VNF +KF VNY+D + N+ +PVFSIHG
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISVPVFSIHG 127
Query: 127 NHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGN 186
NHDDP G D L A+DILS VN+FG+ + V +I + P+L++KGST +ALYGLG+
Sbjct: 128 NHDDPTGADALCALDILSCAGFVNHFGRSM----SVEKIDISPVLLQKGSTKIALYGLGS 183
Query: 187 IRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFL 246
I DERL RMF V +RP+ E + WFN+ V+HQNR K N I E FL F+
Sbjct: 184 IPDERLYRMFVNKK-VTMLRPKEDE----NSWFNLFVIHQNRSKHGSTNFIPEQFLDDFI 238
Query: 247 DFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTK 306
D V+WGHEHEC I P + F+++QPGSSV TSL GE+ KH+ LL IK + K
Sbjct: 239 DLVIWGHEHECKIAPTKNEQQLFYVSQPGSSVVTSLSPGEAVKKHIGLLRIKGRKMNMQK 298
Query: 307 IPLTSVRPFEYTEIILKDEADI-DPDDQN--SILEH--LDKVVRNLIERSSKKTVNRSEL 361
IPL +VR F +++L D DI +PD+ ++++ L+KV ++E + ++ + S+
Sbjct: 299 IPLRTVRQFFMEDVVLADHPDIFNPDNPKVTQVIQNFCLEKV-EEMLENAERERLGNSQQ 357
Query: 362 -KLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDILIFXXXXXXXXAEAKIDDFERL 419
+ PL+R++VDYSG F + RF QK+V +VANP+D++ F + +F +
Sbjct: 358 PEKPLIRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDVIHFFRHREQKENTGEEINFGKF 417
Query: 420 --RPEELNQQNIEALVAE 435
+P E +E LV +
Sbjct: 418 ISKPSEGTTLRVEDLVKQ 435
>UNIPROTKB|F1PUK4 [details] [associations]
symbol:MRE11A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007126 "meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 GO:GO:0005634 GO:GO:0007126 GO:GO:0030145
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519 KO:K10865
OMA:FVNKQVT PANTHER:PTHR10139 TIGRFAMs:TIGR00583
GeneTree:ENSGT00390000017288 CTD:4361 EMBL:AAEX03012721
RefSeq:XP_542244.2 Ensembl:ENSCAFT00000006688 GeneID:494006
KEGG:cfa:494006 Uniprot:F1PUK4
Length = 708
Score = 972 (347.2 bits), Expect = 7.4e-98, P = 7.4e-98
Identities = 200/437 (45%), Positives = 284/437 (64%)
Query: 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKP 67
D NT +ILVATD HLG+MEKD +R +D++ +EI +A++ EVDF+LLGGDLFHENKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAVRGNDTYVTLDEILRLAQENEVDFILLGGDLFHENKP 67
Query: 68 SRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFSIHG 126
SR TL +E+LR++C+ DRPVQF+++SDQ+VNF +KF VNY+D + N+ +PVFSIHG
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 127
Query: 127 NHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGN 186
NHDDP G D L A+D+LS VN+FG+ + V +I + P+L++KGST +ALYGLG+
Sbjct: 128 NHDDPTGADALCALDVLSCAGFVNHFGRSM----SVEKIDISPVLLQKGSTKIALYGLGS 183
Query: 187 IRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFL 246
I DERL RMF V +RP+ E + WFN+ V+HQNR K N I E FL F+
Sbjct: 184 IPDERLYRMFVNKK-VTMLRPKEDE----NSWFNLFVIHQNRSKHGNTNFIPEQFLDDFI 238
Query: 247 DFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTK 306
D V+WGHEHEC I P + F+++QPGSSV TSL GE+ KHV LL IK + K
Sbjct: 239 DLVIWGHEHECKIAPTKNEQQLFYVSQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMQK 298
Query: 307 IPLTSVRPFEYTEIILKDEADI-DPDDQN---SILEHLDKVVRNLIERSSKKTVNRSEL- 361
IPL +VR F +++L D +I +PD+ +I + ++ ++E + ++ + S+
Sbjct: 299 IPLNTVRQFFMEDVVLADHPEIFNPDNPKVTQAIQSFCLEKIKEMLENAERERLGNSQQP 358
Query: 362 KLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDILIFXXXXXXXXAEAKIDDFERL- 419
+ PL+R++VDYSG F + RF QK+V +VANP+D++ F + +F +L
Sbjct: 359 EKPLIRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDVIHFFRHREQKEKTGEEINFGKLI 418
Query: 420 -RPEELNQQNIEALVAE 435
+P E +E LV +
Sbjct: 419 TKPSEGTTLRVEDLVKQ 435
>MGI|MGI:1100512 [details] [associations]
symbol:Mre11a "meiotic recombination 11 homolog A (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0000075 "cell cycle
checkpoint" evidence=IMP] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0007062 "sister chromatid cohesion" evidence=ISO]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007129 "synapsis"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030145
"manganese ion binding" evidence=IEA] [GO:0030870 "Mre11 complex"
evidence=ISO] [GO:0031954 "positive regulation of protein
autophosphorylation" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0033674 "positive regulation
of kinase activity" evidence=ISO] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO] [GO:0051276 "chromosome organization"
evidence=IMP] InterPro:IPR003701 InterPro:IPR004843
InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882
MGI:MGI:1100512 GO:GO:0005634 GO:GO:0048471 GO:GO:0005654
GO:GO:0007507 GO:GO:0003677 GO:GO:0008283 GO:GO:0030145
GO:GO:0000790 GO:GO:0004003 GO:GO:0004527 GO:GO:0006302
GO:GO:0090305 GO:GO:0000794 GO:GO:0004519 GO:GO:0032876
GO:GO:0000781 GO:GO:0000075 GO:GO:0007129 GO:GO:0007062
GO:GO:0031954 eggNOG:COG0420 HOGENOM:HOG000216581 KO:K10865
OMA:FVNKQVT PANTHER:PTHR10139 TIGRFAMs:TIGR00583
GeneTree:ENSGT00390000017288 CTD:4361 HOVERGEN:HBG052508
OrthoDB:EOG46WZ82 GO:GO:0033674 EMBL:U58987 EMBL:U60318
EMBL:BC065144 IPI:IPI00118853 IPI:IPI00283379 RefSeq:NP_061206.1
UniGene:Mm.149071 ProteinModelPortal:Q61216 SMR:Q61216
IntAct:Q61216 STRING:Q61216 PhosphoSite:Q61216 PaxDb:Q61216
PRIDE:Q61216 Ensembl:ENSMUST00000034405 Ensembl:ENSMUST00000115632
GeneID:17535 KEGG:mmu:17535 InParanoid:Q61216 NextBio:292160
PMAP-CutDB:Q61216 Bgee:Q61216 Genevestigator:Q61216
GermOnline:ENSMUSG00000031928 Uniprot:Q61216
Length = 706
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 195/403 (48%), Positives = 269/403 (66%)
Query: 5 PREDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHE 64
P +D +T +ILVATD HLG+MEKD +R +D+F F+EI +A + EVDF+LLGGDLFHE
Sbjct: 6 PLDD-EDTFKILVATDIHLGFMEKDAVRGNDTFVTFDEILRLALENEVDFILLGGDLFHE 64
Query: 65 NKPSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFS 123
NKPSR TL +E+LR++C+ DRPVQF+V+SDQ+VNF +KF VNY+D + N+ +PVFS
Sbjct: 65 NKPSRKTLHSCLELLRKYCMGDRPVQFEVISDQSVNFGFSKFPWVNYQDGNLNISIPVFS 124
Query: 124 IHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYG 183
IHGNHDDP G D L A+D+LS VN+FG+ + V ++ + P+L++KGST +ALYG
Sbjct: 125 IHGNHDDPTGADALCALDVLSCAGFVNHFGRSM----SVEKVDISPVLLQKGSTKLALYG 180
Query: 184 LGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLP 243
LG+I DERL RMF V +RP+ E + WFN+ V+HQNR K N I E FL
Sbjct: 181 LGSIPDERLYRMFVNKK-VTMLRPKEDE----NSWFNLFVIHQNRSKHGNTNFIPEQFLD 235
Query: 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYR 303
F+D V+WGHEHEC I P + F+++QPGSSV TSL GE+ KHV LL IK +
Sbjct: 236 DFIDLVIWGHEHECKIGPIKNEQQLFYVSQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMN 295
Query: 304 PTKIPLTSVRPFEYTEIILKDEADI-DPDDQN---SILEH-LDKVVRNLIERSSKKTVNR 358
K+PL +VR F +++L + ++ +PD+ +I L+K+ L ++ N
Sbjct: 296 MQKLPLRTVRRFFIEDVVLANHPNLFNPDNPKVTQAIQSFCLEKIEEMLDSAERERLGNP 355
Query: 359 SELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDILIF 400
+ PL+R++VDYSG F N RF QK+V +VANP+D++ F
Sbjct: 356 QQPGKPLIRLRVDYSGGFEPFNVLRFSQKFVDRVANPKDVIHF 398
>UNIPROTKB|F1N9H0 [details] [associations]
symbol:MRE11A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0030145 "manganese ion binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0000075 "cell cycle
checkpoint" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0007129 "synapsis" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0031954 "positive regulation of
protein autophosphorylation" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0033674
"positive regulation of kinase activity" evidence=IEA]
InterPro:IPR003701 InterPro:IPR004843 InterPro:IPR007281
Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882 GO:GO:0005634
GO:GO:0003677 GO:GO:0008283 GO:GO:0030145 GO:GO:0004003
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
GO:GO:0032876 GO:GO:0000781 GO:GO:0000075 GO:GO:0007129
GO:GO:0007062 GO:GO:0031954 OMA:FVNKQVT PANTHER:PTHR10139
TIGRFAMs:TIGR00583 GeneTree:ENSGT00390000017288 GO:GO:0033674
EMBL:AADN02004885 EMBL:AADN02004886 IPI:IPI00820681
Ensembl:ENSGALT00000036414 ArrayExpress:F1N9H0 Uniprot:F1N9H0
Length = 702
Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
Identities = 192/401 (47%), Positives = 268/401 (66%)
Query: 7 EDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENK 66
+D +T +IL+ATD HLGY+EKD +R +D+F F EI A++ EVDF+LLGGDLFHENK
Sbjct: 7 KDDEDTFKILIATDIHLGYLEKDAVRGNDTFVTFNEILEHAQKNEVDFILLGGDLFHENK 66
Query: 67 PSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFSIH 125
PSR T+ +E LR++C+ DRPV F+V+SDQAVNFQ +KF VNY+D + N+ +P+FSIH
Sbjct: 67 PSRKTIHTCLESLRKYCMGDRPVSFEVLSDQAVNFQFSKFPWVNYQDENLNISMPIFSIH 126
Query: 126 GNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLG 185
GNHDDP GVD L A+DILS L+N+FG+ + V +I + PIL+RKG T +ALYGLG
Sbjct: 127 GNHDDPTGVDALCALDILSCAGLLNHFGR----STSVEKIDISPILLRKGRTKIALYGLG 182
Query: 186 NIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRF 245
I DERL RMF V +RP+ E+ WFN+ V+HQNR K N I E FL F
Sbjct: 183 AIPDERLYRMFVNKQ-VTMLRPKEDED----SWFNMFVIHQNRSKHGATNYIPEQFLDDF 237
Query: 246 LDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPT 305
++ VVWGHEHEC I P + F++TQPGSSV TSL GE+ KH+ LL +K + +
Sbjct: 238 INLVVWGHEHECKITPAQNEQQHFYVTQPGSSVVTSLSPGEAVKKHIGLLRVKGKKMKMQ 297
Query: 306 KIPLTSVRPFEYTEIILKDEADI-DPDDQN---SILEHLDKVVRNLIERSSKKTV-NRSE 360
+I L +VR F +++L D ++ +PD+ +I + V +++ + ++ + N +
Sbjct: 298 RIALETVRTFYMEDVVLADHPELFNPDNPKVTQAIQAFCMEKVEMMLDNAERERLGNPRQ 357
Query: 361 LKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDILIF 400
+ PL+R++VDY+G F RF QKY+ +VANP+DI+ F
Sbjct: 358 PQKPLIRLRVDYTGGFEPFIVHRFSQKYMDRVANPKDIIHF 398
>UNIPROTKB|F1NYL0 [details] [associations]
symbol:MRE11A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0030145 "manganese ion binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
InterPro:IPR003701 InterPro:IPR004843 InterPro:IPR007281
Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882 GO:GO:0005634
GO:GO:0007126 GO:GO:0030145 GO:GO:0004527 GO:GO:0006302
GO:GO:0090305 GO:GO:0004519 PANTHER:PTHR10139 TIGRFAMs:TIGR00583
GeneTree:ENSGT00390000017288 IPI:IPI00599486 EMBL:AADN02004885
EMBL:AADN02004886 Ensembl:ENSGALT00000027819 ArrayExpress:F1NYL0
Uniprot:F1NYL0
Length = 693
Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
Identities = 192/400 (48%), Positives = 267/400 (66%)
Query: 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKP 67
D +T +IL+ATD HLGY+EKD +R +D+F F EI A++ EVDF+LLGGDLFHENKP
Sbjct: 1 DDEDTFKILIATDIHLGYLEKDAVRGNDTFVTFNEILEHAQKNEVDFILLGGDLFHENKP 60
Query: 68 SRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFSIHG 126
SR T+ +E LR++C+ DRPV F+V+SDQAVNFQ +KF VNY+D + N+ +P+FSIHG
Sbjct: 61 SRKTIHTCLESLRKYCMGDRPVSFEVLSDQAVNFQFSKFPWVNYQDENLNISMPIFSIHG 120
Query: 127 NHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGN 186
NHDDP GVD L A+DILS L+N+FG+ + V +I + PIL+RKG T +ALYGLG
Sbjct: 121 NHDDPTGVDALCALDILSCAGLLNHFGR----STSVEKIDISPILLRKGRTKIALYGLGA 176
Query: 187 IRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFL 246
I DERL RMF V +RP+ E+ WFN+ V+HQNR K N I E FL F+
Sbjct: 177 IPDERLYRMFVNKQ-VTMLRPKEDED----SWFNMFVIHQNRSKHGATNYIPEQFLDDFI 231
Query: 247 DFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTK 306
+ VVWGHEHEC I P + F++TQPGSSV TSL GE+ KH+ LL +K + + +
Sbjct: 232 NLVVWGHEHECKITPAQNEQQHFYVTQPGSSVVTSLSPGEAVKKHIGLLRVKGKKMKMQR 291
Query: 307 IPLTSVRPFEYTEIILKDEADI-DPDDQN---SILEHLDKVVRNLIERSSKKTV-NRSEL 361
I L +VR F +++L D ++ +PD+ +I + V +++ + ++ + N +
Sbjct: 292 IALETVRTFYMEDVVLADHPELFNPDNPKVTQAIQAFCMEKVEMMLDNAERERLGNPRQP 351
Query: 362 KLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDILIF 400
+ PL+R++VDY+G F RF QKY+ +VANP+DI+ F
Sbjct: 352 QKPLIRLRVDYTGGFEPFIVHRFSQKYMDRVANPKDIIHF 391
>RGD|69263 [details] [associations]
symbol:Mre11a "MRE11 meiotic recombination 11 homolog A (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000075 "cell
cycle checkpoint" evidence=IEA;ISO;TAS] [GO:0000723 "telomere
maintenance" evidence=TAS] [GO:0000781 "chromosome, telomeric
region" evidence=IEA;ISO] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA;ISO]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006302 "double-strand
break repair" evidence=IEA;ISO;TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=IEA;ISO] [GO:0007129 "synapsis" evidence=IEA;ISO]
[GO:0007131 "reciprocal meiotic recombination" evidence=TAS]
[GO:0007507 "heart development" evidence=IEP] [GO:0008022 "protein
C-terminus binding" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=IEA;ISO] [GO:0030145 "manganese ion binding"
evidence=IEA] [GO:0030870 "Mre11 complex" evidence=ISO;TAS]
[GO:0031954 "positive regulation of protein autophosphorylation"
evidence=IEA;ISO] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=IEA;ISO] [GO:0033674 "positive regulation of kinase
activity" evidence=IEA;ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051276 "chromosome organization"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003701 InterPro:IPR004843 InterPro:IPR007281
Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882 RGD:69263 GO:GO:0048471
GO:GO:0005654 GO:GO:0007507 GO:GO:0003677 GO:GO:0008283
GO:GO:0030145 GO:GO:0000790 GO:GO:0004003 GO:GO:0004527
GO:GO:0006302 GO:GO:0090305 GO:GO:0000794 GO:GO:0004519
GO:GO:0032876 GO:GO:0000781 GO:GO:0000723 GO:GO:0007131
GO:GO:0000075 GO:GO:0007129 GO:GO:0007062 GO:GO:0031954
eggNOG:COG0420 HOGENOM:HOG000216581 KO:K10865 PANTHER:PTHR10139
TIGRFAMs:TIGR00583 CTD:4361 HOVERGEN:HBG052508 OrthoDB:EOG46WZ82
GO:GO:0030870 GO:GO:0033674 EMBL:AF218574 IPI:IPI00200709
RefSeq:NP_071615.1 UniGene:Rn.209040 ProteinModelPortal:Q9JIM0
STRING:Q9JIM0 PhosphoSite:Q9JIM0 PRIDE:Q9JIM0 GeneID:64046
KEGG:rno:64046 UCSC:RGD:69263 InParanoid:Q9JIM0 NextBio:612709
ArrayExpress:Q9JIM0 Genevestigator:Q9JIM0
GermOnline:ENSRNOG00000009506 Uniprot:Q9JIM0
Length = 706
Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
Identities = 192/403 (47%), Positives = 267/403 (66%)
Query: 5 PREDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHE 64
P +D +T +ILVATD HLG+MEKD +R +D+F F+EI +A + EVDF+LLGGDLFHE
Sbjct: 6 PLDD-EDTFKILVATDIHLGFMEKDAVRGNDTFVTFDEILRLALENEVDFILLGGDLFHE 64
Query: 65 NKPSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFS 123
NKPSR TL +E+LR++C+ DRPVQF+++SDQ+VNF +KF VNY D + N+ +PVFS
Sbjct: 65 NKPSRKTLHSCLELLRKYCMGDRPVQFEIISDQSVNFGFSKFPWVNYRDGNLNISIPVFS 124
Query: 124 IHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYG 183
IHGNHDDP G D L A+D+LS VN+FG+ + V ++ + P+L++KGST +ALYG
Sbjct: 125 IHGNHDDPTGADALCALDVLSCAGFVNHFGRSM----SVEKVDISPVLLQKGSTKLALYG 180
Query: 184 LGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLP 243
LG+I DERL RMF V +RP+ E + WFN+ V+HQNR K N I E FL
Sbjct: 181 LGSIPDERLYRMFVNKK-VTMLRPKEDE----NSWFNLFVIHQNRSKHGSTNFIPEQFLD 235
Query: 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYR 303
F+D V+WGHEHEC I P F+++QPGSSV T+L GE+ KHV LL +K +
Sbjct: 236 DFIDLVIWGHEHECKIGPTRNEQQLFYVSQPGSSVVTALSPGETVKKHVGLLRVKGRKMN 295
Query: 304 PTKIPLTSVRPFEYTEIILKDEADI-DPDDQN---SILEH-LDKVVRNLIERSSKKTVNR 358
K+PL +VR F +++L + + +PD+ +I L+K+ L ++ N
Sbjct: 296 MQKLPLRTVRQFFMEDVVLANHPSLFNPDNPKVTQAIQSFCLEKIEEMLDSAERERLGNP 355
Query: 359 SELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDILIF 400
+ + PL+R++VDYSG F N RF QK+V +VANP+D++ F
Sbjct: 356 QQPEKPLIRLRVDYSGGFEPFNVLRFSQKFVDRVANPKDVIHF 398
>UNIPROTKB|Q9JIM0 [details] [associations]
symbol:Mre11a "Double-strand break repair protein MRE11A"
species:10116 "Rattus norvegicus" [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0030145 "manganese ion binding" evidence=IEA]
InterPro:IPR003701 InterPro:IPR004843 InterPro:IPR007281
Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882 RGD:69263 GO:GO:0048471
GO:GO:0005654 GO:GO:0007507 GO:GO:0003677 GO:GO:0008283
GO:GO:0030145 GO:GO:0000790 GO:GO:0004003 GO:GO:0004527
GO:GO:0006302 GO:GO:0090305 GO:GO:0000794 GO:GO:0004519
GO:GO:0032876 GO:GO:0000781 GO:GO:0000723 GO:GO:0007131
GO:GO:0000075 GO:GO:0007129 GO:GO:0007062 GO:GO:0031954
eggNOG:COG0420 HOGENOM:HOG000216581 KO:K10865 PANTHER:PTHR10139
TIGRFAMs:TIGR00583 CTD:4361 HOVERGEN:HBG052508 OrthoDB:EOG46WZ82
GO:GO:0030870 GO:GO:0033674 EMBL:AF218574 IPI:IPI00200709
RefSeq:NP_071615.1 UniGene:Rn.209040 ProteinModelPortal:Q9JIM0
STRING:Q9JIM0 PhosphoSite:Q9JIM0 PRIDE:Q9JIM0 GeneID:64046
KEGG:rno:64046 UCSC:RGD:69263 InParanoid:Q9JIM0 NextBio:612709
ArrayExpress:Q9JIM0 Genevestigator:Q9JIM0
GermOnline:ENSRNOG00000009506 Uniprot:Q9JIM0
Length = 706
Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
Identities = 192/403 (47%), Positives = 267/403 (66%)
Query: 5 PREDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHE 64
P +D +T +ILVATD HLG+MEKD +R +D+F F+EI +A + EVDF+LLGGDLFHE
Sbjct: 6 PLDD-EDTFKILVATDIHLGFMEKDAVRGNDTFVTFDEILRLALENEVDFILLGGDLFHE 64
Query: 65 NKPSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFS 123
NKPSR TL +E+LR++C+ DRPVQF+++SDQ+VNF +KF VNY D + N+ +PVFS
Sbjct: 65 NKPSRKTLHSCLELLRKYCMGDRPVQFEIISDQSVNFGFSKFPWVNYRDGNLNISIPVFS 124
Query: 124 IHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYG 183
IHGNHDDP G D L A+D+LS VN+FG+ + V ++ + P+L++KGST +ALYG
Sbjct: 125 IHGNHDDPTGADALCALDVLSCAGFVNHFGRSM----SVEKVDISPVLLQKGSTKLALYG 180
Query: 184 LGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLP 243
LG+I DERL RMF V +RP+ E + WFN+ V+HQNR K N I E FL
Sbjct: 181 LGSIPDERLYRMFVNKK-VTMLRPKEDE----NSWFNLFVIHQNRSKHGSTNFIPEQFLD 235
Query: 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYR 303
F+D V+WGHEHEC I P F+++QPGSSV T+L GE+ KHV LL +K +
Sbjct: 236 DFIDLVIWGHEHECKIGPTRNEQQLFYVSQPGSSVVTALSPGETVKKHVGLLRVKGRKMN 295
Query: 304 PTKIPLTSVRPFEYTEIILKDEADI-DPDDQN---SILEH-LDKVVRNLIERSSKKTVNR 358
K+PL +VR F +++L + + +PD+ +I L+K+ L ++ N
Sbjct: 296 MQKLPLRTVRQFFMEDVVLANHPSLFNPDNPKVTQAIQSFCLEKIEEMLDSAERERLGNP 355
Query: 359 SELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDILIF 400
+ + PL+R++VDYSG F N RF QK+V +VANP+D++ F
Sbjct: 356 QQPEKPLIRLRVDYSGGFEPFNVLRFSQKFVDRVANPKDVIHF 398
>UNIPROTKB|Q9IAM7 [details] [associations]
symbol:MRE11 "Double-strand break repair protein MRE11"
species:9031 "Gallus gallus" [GO:0030145 "manganese ion binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006302
"double-strand break repair" evidence=TAS] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 GO:GO:0007126 GO:GO:0005654 GO:GO:0030145
GO:GO:0004527 GO:GO:0090305 GO:GO:0000724 GO:GO:0004519
Reactome:REACT_115612 eggNOG:COG0420 HOGENOM:HOG000216581 KO:K10865
PANTHER:PTHR10139 TIGRFAMs:TIGR00583 EMBL:AF166094 IPI:IPI00599486
RefSeq:NP_990109.1 UniGene:Gga.3157 ProteinModelPortal:Q9IAM7
STRING:Q9IAM7 GeneID:395555 KEGG:gga:395555 CTD:4361
HOVERGEN:HBG052508 OrthoDB:EOG46WZ82 NextBio:20815630
Uniprot:Q9IAM7
Length = 700
Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
Identities = 190/401 (47%), Positives = 266/401 (66%)
Query: 7 EDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENK 66
+D +T +IL+ATD HLGY+EKD +R +D+F F EI A++ EVDF+LLGGDLFHENK
Sbjct: 7 QDDEDTFKILIATDIHLGYLEKDAVRGNDTFVTFNEILEHAQKNEVDFILLGGDLFHENK 66
Query: 67 PSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFSIH 125
PSR T+ +E LR++C+ DRPV F+V+SDQAVNFQ +KF VNY+D + N+ +P+FSIH
Sbjct: 67 PSRKTIHTCLESLRKYCMGDRPVSFEVLSDQAVNFQLSKFPWVNYQDENLNIFMPIFSIH 126
Query: 126 GNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLG 185
GNHDDP GVD L A+DILS L+N+FG+ + V +I + PIL+RKG T +ALYGLG
Sbjct: 127 GNHDDPTGVDALCALDILSCAGLLNHFGR----STSVEKIDISPILLRKGRTKIALYGLG 182
Query: 186 NIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRF 245
I DERL RMF V +RP+ E+ WFN+ V+HQNR K N I E FL F
Sbjct: 183 AIPDERLYRMFVNKQ-VTMLRPKEDED----SWFNMFVIHQNRSKHGATNYIPEQFLDDF 237
Query: 246 LDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPT 305
++ VWGHEHEC I P + F++TQPGSSV TSL GE+ KH+ LL +K + +
Sbjct: 238 INLAVWGHEHECKITPAQNEQQHFYVTQPGSSVVTSLSPGEAVKKHIGLLRVKGKKMKMQ 297
Query: 306 KIPLTSVRPFEYTEIILKDEADI-DPDDQN---SILEHLDKVVRNLIERSSKKTV-NRSE 360
+I L +VR F +++L D ++ +PD+ +I + V +++ + ++ + N +
Sbjct: 298 RIALETVRTFYMEDVVLADHPELFNPDNPKVTQAIQAFCMEKVEMMLDNAERERLGNPRQ 357
Query: 361 LKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDILIF 400
+ PL+ ++VDY+G F RF QKY+ +VANP+DI+ F
Sbjct: 358 PQKPLIILRVDYTGGFEPFIVHRFSQKYMDRVANPKDIIHF 398
>FB|FBgn0020270 [details] [associations]
symbol:mre11 "meiotic recombination 11" species:7227
"Drosophila melanogaster" [GO:0004519 "endonuclease activity"
evidence=ISS;NAS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0004527 "exonuclease activity" evidence=ISS;NAS]
[GO:0006289 "nucleotide-excision repair" evidence=NAS] [GO:0030145
"manganese ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IMP]
[GO:0051276 "chromosome organization" evidence=IMP] [GO:0031572 "G2
DNA damage checkpoint" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0016233 "telomere capping"
evidence=IDA] InterPro:IPR003701 InterPro:IPR004843
InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882
GO:GO:0005634 GO:GO:0007126 EMBL:AE014134 GO:GO:0030145
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
GO:GO:0016233 GO:GO:0031572 KO:K10865 PANTHER:PTHR10139
TIGRFAMs:TIGR00583 GeneTree:ENSGT00390000017288 EMBL:AF132144
RefSeq:NP_001245981.1 RefSeq:NP_523547.1 UniGene:Dm.407 SMR:Q9XYZ4
STRING:Q9XYZ4 EnsemblMetazoa:FBtr0080213 EnsemblMetazoa:FBtr0308750
GeneID:34565 KEGG:dme:Dmel_CG16928 UCSC:CG16928-RA CTD:34565
FlyBase:FBgn0020270 InParanoid:Q9XYZ4 OMA:VNYFGRW OrthoDB:EOG44B8HS
GenomeRNAi:34565 NextBio:789077 Uniprot:Q9XYZ4
Length = 620
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 195/443 (44%), Positives = 275/443 (62%)
Query: 7 EDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENK 66
+D N +RILVATD HLGY EKD +R DSF AFEEI +A ++VD +LLGGDLFH+
Sbjct: 9 QDADNVIRILVATDNHLGYGEKDAVRGEDSFTAFEEILELAVSEDVDMILLGGDLFHDAV 68
Query: 67 PSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGH-VNYEDPHFNVGLPVFSIH 125
PS++ L K IE+LRR+ DRPV +++SDQ F N VNYEDP+ N+ +PVFSIH
Sbjct: 69 PSQNALHKCIELLRRYTFGDRPVSLEILSDQGQCFHNAVNQSVNYEDPNLNIAIPVFSIH 128
Query: 126 GNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLG 185
GNHDDP+G LS++D+LS LVNYFG+ + + ++ + P+L+RKG + +ALYGL
Sbjct: 129 GNHDDPSGFGRLSSLDLLSTSGLVNYFGRW----TDLTQVEISPVLMRKGESQLALYGLS 184
Query: 186 NIRDERLNRMFQTPHAVQWMRPE-------AQEECQVSDWFNILVLHQNRVKTNPKNAIN 238
+I D RL R+ + V++ PE E + DWF++LV+HQNR PKN +
Sbjct: 185 HIHDGRLARLIKD-FKVKFNCPENVANGEDGNESKEEEDWFHLLVVHQNRADRGPKNYLP 243
Query: 239 EHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIK 298
E LP FL V+WGHEH+C I+P+E F+++QPGSSV TSL EGE+K KHV LLEI
Sbjct: 244 EDLLPSFLHLVIWGHEHDCRIEPEENAKKRFYVSQPGSSVPTSLSEGEAKKKHVGLLEIY 303
Query: 299 ENQYRPTKIPLTSVRPFEYTEIILKDEAD----IDPDDQNSILEHLDKVVRNLIERS-SK 353
+ +++ +PL +VRPF Y ++L D AD ++ D + + + V +IER+ ++
Sbjct: 304 KGKFKLKPLPLETVRPFVYESVVLADHADELGLVEGDASTKVFKFAQERVEAMIERAVAQ 363
Query: 354 KTVNRSELKLPLVRIKVDYSGFMTI-NPQRFGQKYVGKVANPQDILIFXXXXXXXXAEAK 412
T + + LPL+R+++ Y+ + N RFG+ +VAN QD++ F EA
Sbjct: 364 HTGHPKQPTLPLIRLRLLYTDESCMFNAIRFGEMLSTRVANVQDVVQFSKVVKRTKTEAV 423
Query: 413 IDDFERLRP--EELNQQNIEALV 433
D E LR E N +E LV
Sbjct: 424 NLDKEALRRALEADNATRVEELV 446
>POMBASE|SPAC13C5.07 [details] [associations]
symbol:mre11 "Mre11 nuclease" species:4896
"Schizosaccharomyces pombe" [GO:0000014 "single-stranded DNA
specific endodeoxyribonuclease activity" evidence=TAS] [GO:0000077
"DNA damage checkpoint" evidence=IMP] [GO:0000723 "telomere
maintenance" evidence=IMP] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IGI] [GO:0000729 "DNA
double-strand break processing" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP] [GO:0006311 "meiotic gene
conversion" evidence=IDA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IMP] [GO:0008310 "single-stranded DNA
specific 3'-5' exodeoxyribonuclease activity" evidence=TAS]
[GO:0008311 "double-stranded DNA specific 3'-5'
exodeoxyribonuclease activity" evidence=TAS] [GO:0030145 "manganese
ion binding" evidence=IEA] [GO:0030870 "Mre11 complex"
evidence=TAS] [GO:0031573 "intra-S DNA damage checkpoint"
evidence=IMP] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=TAS] InterPro:IPR003701 InterPro:IPR004843
InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882
PomBase:SPAC13C5.07 EMBL:CU329670 GO:GO:0034613
GenomeReviews:CU329670_GR GO:GO:0030145 GO:GO:0000724 GO:GO:0008311
GO:GO:0000723 GO:GO:0007131 GO:GO:0006303 GO:GO:0000729
GO:GO:0031573 GO:GO:0042138 GO:GO:0000014 GO:GO:0006311
GO:GO:0008310 eggNOG:COG0420 HOGENOM:HOG000216581 KO:K10865
OMA:FVNKQVT PANTHER:PTHR10139 TIGRFAMs:TIGR00583 GO:GO:0030870
OrthoDB:EOG4P2T9Q PDB:4FBK PDB:4FBQ PDB:4FBW PDBsum:4FBK
PDBsum:4FBQ PDBsum:4FBW EMBL:X82322 PIR:S58097 RefSeq:NP_592935.1
PDB:4FCX PDBsum:4FCX ProteinModelPortal:Q09683 DIP:DIP-52388N
IntAct:Q09683 STRING:Q09683 EnsemblFungi:SPAC13C5.07.1
GeneID:2542757 KEGG:spo:SPAC13C5.07 NextBio:20803802 Uniprot:Q09683
Length = 649
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 184/440 (41%), Positives = 272/440 (61%)
Query: 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRS 70
NT+RIL+++D H+GY EKD +R +DSF +F EI IA +++VD +LLGGD+FH+NKPSR
Sbjct: 16 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRK 75
Query: 71 TLVKAIEILRRHCLNDRPVQFQVVSDQAVNF-QNKFGHVNYEDPHFNVGLPVFSIHGNHD 129
L +A+ LR +CL D+P + +++SD ++ ++NY DP+ NV +PVFSIHGNHD
Sbjct: 76 ALYQALRSLRLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHD 135
Query: 130 DPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGNIRD 189
DP+G SA+DIL LVNYFG++ + I V PIL++KG T +ALYG+ N+RD
Sbjct: 136 DPSGDGRYSALDILQVTGLVNYFGRVPENDN----IVVSPILLQKGFTKLALYGISNVRD 191
Query: 190 ERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFLDFV 249
ERL F+ + V+++RP+ + +WFN+L +HQN P + + E F+ F DFV
Sbjct: 192 ERLYHSFRE-NKVKFLRPDLYRD----EWFNLLTVHQNHSAHTPTSYLPESFIQDFYDFV 246
Query: 250 VWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPL 309
+WGHEHECLID P F + QPGS++ATSL GE+ PKH +L I + KI L
Sbjct: 247 LWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFHLEKIRL 306
Query: 310 TSVRPFEYTEIILKDEADIDP--DDQNSILEHL-DKVVRNLIERSSK--------KTVNR 358
+VRPF +IIL + + I P +++ +L +L KV + E +++ V
Sbjct: 307 RTVRPFIMKDIILSEVSSIPPMVENKKEVLTYLISKVEEAITEANAQWYEAQGTVPVVEN 366
Query: 359 SELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDILIFXXXXXXXXAEAKIDDFE 417
+ LPL+R++VDY+G + T NPQRF ++VG+VAN D++ F ++ D
Sbjct: 367 EKPPLPLIRLRVDYTGGYQTENPQRFSNRFVGRVANATDVVQFYLKKKYTRSKRN-DGLY 425
Query: 418 RLRPEEL--NQQNIEALVAE 435
E++ N +E+LV E
Sbjct: 426 TSAVEDIKINSLRVESLVNE 445
>CGD|CAL0000164 [details] [associations]
symbol:MRE11 species:5476 "Candida albicans" [GO:0006281 "DNA
repair" evidence=IMP] [GO:0034599 "cellular response to oxidative
stress" evidence=IMP] [GO:0006311 "meiotic gene conversion"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0030437 "ascospore formation" evidence=IEA] [GO:0000727
"double-strand break repair via break-induced replication"
evidence=IEA] [GO:0000729 "DNA double-strand break processing"
evidence=IEA] [GO:0051037 "regulation of transcription during
meiosis" evidence=IEA] [GO:0031573 "intra-S DNA damage checkpoint"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IEA] [GO:0000723 "telomere
maintenance" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0003691 "double-stranded telomeric DNA binding"
evidence=IEA] [GO:0032947 "protein complex scaffold" evidence=IEA]
[GO:0004017 "adenylate kinase activity" evidence=IEA] [GO:0004520
"endodeoxyribonuclease activity" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] [GO:0043047 "single-stranded
telomeric DNA binding" evidence=IEA] [GO:0051880 "G-quadruplex DNA
binding" evidence=IEA] [GO:0030870 "Mre11 complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 CGD:CAL0000164 GO:GO:0005634 GO:GO:0007126
GO:GO:0034599 GO:GO:0006281 GO:GO:0030145 GO:GO:0035690
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
EMBL:AACQ01000156 eggNOG:COG0420 KO:K10865 PANTHER:PTHR10139
TIGRFAMs:TIGR00583 RefSeq:XP_712486.1 RefSeq:XP_888757.1
ProteinModelPortal:Q59S37 STRING:Q59S37 DNASU:3704159
GeneID:3645898 GeneID:3704159 KEGG:cal:CaO19.6915
KEGG:cal:CaO19_6915 Uniprot:Q59S37
Length = 682
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 176/426 (41%), Positives = 257/426 (60%)
Query: 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRS 70
+T+R+L+ TD H+G E D IR D+++ F+EI +IA+ K+VD ++ GGDLFH NKP++
Sbjct: 12 DTIRVLLTTDNHVGAFENDPIRGDDAWKTFDEITTIAKDKDVDMIIQGGDLFHINKPTKK 71
Query: 71 TLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDD 130
++ ++ LR +C+ DRP + +++SD A + N F +NYEDP+ N+ +PVF+I GNHDD
Sbjct: 72 SMYHVMKSLRSNCMGDRPCELELLSDPAQSLNNGFDEINYEDPNLNISIPVFAISGNHDD 131
Query: 131 PAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGNIRDE 190
G LSA+D+L+ L+N FGK+ ITV PIL++KG T +ALYG+ N+RDE
Sbjct: 132 ATGESLLSALDVLAVTGLINNFGKV----KNTEAITVSPILLQKGQTKLALYGMSNVRDE 187
Query: 191 RLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFLDFVV 250
RL+R+F+ V++ RP Q E DWFN+ V+HQN ++I E FLP FLDF++
Sbjct: 188 RLHRLFRDG-GVKFQRPNIQTE----DWFNLFVIHQNHAAHTYTSSIPESFLPNFLDFIL 242
Query: 251 WGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPLT 310
WGHEHEC+ P P F + Q GSSVATSL EGE K + +L IK Y + L
Sbjct: 243 WGHEHECIPYPVHNPETTFDVLQAGSSVATSLAEGEVADKKIFILNIKGKDYSIEPVELK 302
Query: 311 SVRPFEYTEIILKDEADIDPD--DQNSILEHLDKVVRNLIERSSKK-------TVNRS-- 359
+VRPF EIIL + D+ P + ++ +L V IER++K+ NR+
Sbjct: 303 TVRPFVLREIILS-KTDLIPGAASKADVIAYLTDEVEKSIERANKQFSSQNISNSNRAIT 361
Query: 360 -----------ELKLPLVRIKVDYSGFMTI-NPQRFGQKYVGKVANPQDILIFXXXXXXX 407
E LPL+R++V+YSG I N RF ++VGK+AN D++ F
Sbjct: 362 NSSNNATADPIEKPLPLIRLRVEYSGGYEIENVTRFSNRFVGKIANVNDVVQFYKKKTPT 421
Query: 408 XAEAKI 413
++ K+
Sbjct: 422 KSDNKL 427
>UNIPROTKB|Q59S37 [details] [associations]
symbol:MRE11 "Putative uncharacterized protein MRE11"
species:237561 "Candida albicans SC5314" [GO:0006281 "DNA repair"
evidence=IMP] [GO:0034599 "cellular response to oxidative stress"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
InterPro:IPR003701 InterPro:IPR004843 InterPro:IPR007281
Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882 CGD:CAL0000164
GO:GO:0005634 GO:GO:0007126 GO:GO:0034599 GO:GO:0006281
GO:GO:0030145 GO:GO:0035690 GO:GO:0004527 GO:GO:0006302
GO:GO:0090305 GO:GO:0004519 EMBL:AACQ01000156 eggNOG:COG0420
KO:K10865 PANTHER:PTHR10139 TIGRFAMs:TIGR00583 RefSeq:XP_712486.1
RefSeq:XP_888757.1 ProteinModelPortal:Q59S37 STRING:Q59S37
DNASU:3704159 GeneID:3645898 GeneID:3704159 KEGG:cal:CaO19.6915
KEGG:cal:CaO19_6915 Uniprot:Q59S37
Length = 682
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 176/426 (41%), Positives = 257/426 (60%)
Query: 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRS 70
+T+R+L+ TD H+G E D IR D+++ F+EI +IA+ K+VD ++ GGDLFH NKP++
Sbjct: 12 DTIRVLLTTDNHVGAFENDPIRGDDAWKTFDEITTIAKDKDVDMIIQGGDLFHINKPTKK 71
Query: 71 TLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDD 130
++ ++ LR +C+ DRP + +++SD A + N F +NYEDP+ N+ +PVF+I GNHDD
Sbjct: 72 SMYHVMKSLRSNCMGDRPCELELLSDPAQSLNNGFDEINYEDPNLNISIPVFAISGNHDD 131
Query: 131 PAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGNIRDE 190
G LSA+D+L+ L+N FGK+ ITV PIL++KG T +ALYG+ N+RDE
Sbjct: 132 ATGESLLSALDVLAVTGLINNFGKV----KNTEAITVSPILLQKGQTKLALYGMSNVRDE 187
Query: 191 RLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFLDFVV 250
RL+R+F+ V++ RP Q E DWFN+ V+HQN ++I E FLP FLDF++
Sbjct: 188 RLHRLFRDG-GVKFQRPNIQTE----DWFNLFVIHQNHAAHTYTSSIPESFLPNFLDFIL 242
Query: 251 WGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPLT 310
WGHEHEC+ P P F + Q GSSVATSL EGE K + +L IK Y + L
Sbjct: 243 WGHEHECIPYPVHNPETTFDVLQAGSSVATSLAEGEVADKKIFILNIKGKDYSIEPVELK 302
Query: 311 SVRPFEYTEIILKDEADIDPD--DQNSILEHLDKVVRNLIERSSKK-------TVNRS-- 359
+VRPF EIIL + D+ P + ++ +L V IER++K+ NR+
Sbjct: 303 TVRPFVLREIILS-KTDLIPGAASKADVIAYLTDEVEKSIERANKQFSSQNISNSNRAIT 361
Query: 360 -----------ELKLPLVRIKVDYSGFMTI-NPQRFGQKYVGKVANPQDILIFXXXXXXX 407
E LPL+R++V+YSG I N RF ++VGK+AN D++ F
Sbjct: 362 NSSNNATADPIEKPLPLIRLRVEYSGGYEIENVTRFSNRFVGKIANVNDVVQFYKKKTPT 421
Query: 408 XAEAKI 413
++ K+
Sbjct: 422 KSDNKL 427
>WB|WBGene00003405 [details] [associations]
symbol:mre-11 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0030145 "manganese
ion binding" evidence=IEA] [GO:0019915 "lipid storage"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0051729 "germline cell cycle
switching, mitotic to meiotic cell cycle" evidence=IMP] [GO:0045132
"meiotic chromosome segregation" evidence=IMP] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 GO:GO:0005634 GO:GO:0009792 GO:GO:0051729
GO:GO:0030145 GO:GO:0019915 GO:GO:0004527 GO:GO:0006302
GO:GO:0090305 GO:GO:0045132 GO:GO:0004519 eggNOG:COG0420 KO:K10865
PANTHER:PTHR10139 TIGRFAMs:TIGR00583 EMBL:Z73978 PIR:T27512
RefSeq:NP_505736.2 ProteinModelPortal:Q23255 SMR:Q23255
IntAct:Q23255 MINT:MINT-226668 STRING:Q23255 PaxDb:Q23255
EnsemblMetazoa:ZC302.1.1 EnsemblMetazoa:ZC302.1.2 GeneID:179488
KEGG:cel:CELE_ZC302.1 UCSC:ZC302.1.1 CTD:179488 WormBase:ZC302.1
GeneTree:ENSGT00390000017288 HOGENOM:HOG000018843 InParanoid:Q23255
OMA:PSREVQH NextBio:905614 GermOnline:ZC302.1 Uniprot:Q23255
Length = 728
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 184/468 (39%), Positives = 268/468 (57%)
Query: 2 GQQPREDIA-NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGD 60
G +P D + + ++ILVATD H GY E D+ FEE+ IA +++VD +LLGGD
Sbjct: 54 GDEPAHDESEDIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGD 113
Query: 61 LFHENKPSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNF-QNKFGHVNYEDPHFNVGL 119
LFHEN PSR + ++LR++CLN P+ + +SD +VNF Q+ FGHVNY D + NVGL
Sbjct: 114 LFHENNPSREVQHRVTQLLRQYCLNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGL 173
Query: 120 PVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAV 179
P+F+IHGNHDD +G L+A+D+L LVN FGK S + E V PIL+RKG T +
Sbjct: 174 PIFTIHGNHDDLSG-KGLTALDLLHESGLVNLFGKH----SNIQEFIVSPILLRKGETRL 228
Query: 180 ALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKT----NPKN 235
ALYG+G+ RD+RL R F+ +++ ++RP A E DWFN+ VLHQNR + + N
Sbjct: 229 ALYGIGSQRDDRLVRAFKN-NSISFLRPNAGAE----DWFNLFVLHQNRPRRAMHRSTGN 283
Query: 236 AINEHFLPRFLDFVVWGHEHECLIDPQ-----EVPGMGFHLTQPGSSVATSLIEGESKPK 290
+ E +P+F D ++WGHEHEC DPQ E G GF++ QPGS+VATSL E+ K
Sbjct: 284 FLPESLIPQFFDLLIWGHEHECKPDPQYVASSEAVGDGFYILQPGSTVATSLTPEEALQK 343
Query: 291 HVLLLEIKENQYRPTKIPLTSVRPFEYTEIIL-KDEADIDPDDQNSILEHLD-KVVRNL- 347
+ L++IK ++ IPL +VRP E++L K P + +H D + + +
Sbjct: 344 NAFLIKIKGRKFASKPIPLQTVRPMVCDELLLDKIPPGSRPILKTDRPKHTDGRYIDEIA 403
Query: 348 IERSSKKTVNRSELK-------LPLVRIKVDYSG-FMTINP---QRFGQKYVGKVANPQD 396
IE + + ++ K LPL+R+KV Y G ++ I P +R G +Y VAN D
Sbjct: 404 IEAKINEMITTAKAKRRPRQPELPLIRLKVIYDGDWLNITPANAKRIGLRYENVVANAVD 463
Query: 397 ILIFXXXXXXXXAEAKIDDFERLRPEELNQQNIEALVAENNLVLHDYF 444
++F E K+ E+ + + +++DYF
Sbjct: 464 -MVFIKKNNKPK-EGKLQTENEKNITEMADEMGQVSATNLQTIINDYF 509
>SGD|S000004837 [details] [associations]
symbol:MRE11 "Subunit of the MRX complex with Rad50p and
Xrs2p" species:4932 "Saccharomyces cerevisiae" [GO:0004519
"endonuclease activity" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=TAS] [GO:0000706 "meiotic DNA double-strand
break processing" evidence=TAS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0004017 "adenylate kinase activity" evidence=IDA]
[GO:0000727 "double-strand break repair via break-induced
replication" evidence=IGI;IMP] [GO:0008408 "3'-5' exonuclease
activity" evidence=IDA] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0004520 "endodeoxyribonuclease activity"
evidence=IDA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP] [GO:0030870 "Mre11
complex" evidence=IPI] [GO:0051037 "regulation of transcription
during meiosis" evidence=IMP] [GO:0030437 "ascospore formation"
evidence=IMP] [GO:0051880 "G-quadruplex DNA binding" evidence=IDA]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IDA]
[GO:0003691 "double-stranded telomeric DNA binding" evidence=IDA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030145 "manganese ion binding" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IGI;IMP]
[GO:0006284 "base-excision repair" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IEA;IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 SGD:S000004837 GO:GO:0005739 GO:GO:0005654
GO:GO:0006284 EMBL:BK006946 GO:GO:0030145 GO:GO:0032947
GO:GO:0030437 GO:GO:0004520 GO:GO:0000706 GO:GO:0006303 EMBL:Z49939
GO:GO:0051880 GO:GO:0042138 GO:GO:0043047 GO:GO:0000727
Reactome:REACT_128851 GO:GO:0008296 eggNOG:COG0420
HOGENOM:HOG000216581 KO:K10865 OMA:FVNKQVT PANTHER:PTHR10139
TIGRFAMs:TIGR00583 GeneTree:ENSGT00390000017288 GO:GO:0030870
EMBL:D11463 EMBL:U60829 PIR:S57592 RefSeq:NP_013951.1
ProteinModelPortal:P32829 SMR:P32829 DIP:DIP-1313N IntAct:P32829
MINT:MINT-388080 STRING:P32829 PaxDb:P32829 EnsemblFungi:YMR224C
GeneID:855264 KEGG:sce:YMR224C CYGD:YMR224c OrthoDB:EOG4P2T9Q
NextBio:978864 Genevestigator:P32829 GermOnline:YMR224C
GO:GO:0003691 GO:GO:0051037 Uniprot:P32829
Length = 692
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 155/375 (41%), Positives = 236/375 (62%)
Query: 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRS 70
+T+RIL+ TD H+GY E D I DS++ F E+ +A+ VD V+ GDLFH NKPS+
Sbjct: 7 DTIRILITTDNHVGYNENDPITGDDSWKTFHEVMMLAKNNNVDMVVQSGDLFHVNKPSKK 66
Query: 71 TLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFSIHGNHD 129
+L + ++ LR C+ D+P + +++SD + F ++F +VNYEDP+FN+ +PVF I GNHD
Sbjct: 67 SLYQVLKTLRLCCMGDKPCELELLSDPSQVFHYDEFTNVNYEDPNFNISIPVFGISGNHD 126
Query: 130 DPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGNIRD 189
D +G L +DIL A L+N+FGK++ +I V P+L +KGST +ALYGL +RD
Sbjct: 127 DASGDSLLCPMDILHATGLINHFGKVIESD----KIKVVPLLFQKGSTKLALYGLAAVRD 182
Query: 190 ERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFLDFV 249
ERL R F+ V + P +E +WFN++ +HQN + E FLP FLD V
Sbjct: 183 ERLFRTFKDG-GVTFEVPTMRE----GEWFNLMCVHQNHTGHTNTAFLPEQFLPDFLDMV 237
Query: 250 VWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQY-RPTKIP 308
+WGHEHEC+ + P F + QPGSSVATSL E E++PK+V +L+IK + + T IP
Sbjct: 238 IWGHEHECIPNLVHNPIKNFDVLQPGSSVATSLCEAEAQPKYVFILDIKYGEAPKMTPIP 297
Query: 309 LTSVRPFEYTEIILKDEADIDPDDQNS----ILEHLDKVVRNLIERSSKKTVNR------ 358
L ++R F+ I L+D + P D+++ ++E +++++R+ E + +K +
Sbjct: 298 LETIRTFKMKSISLQDVPHLRPHDKDATSKYLIEQVEEMIRDANEETKQKLADDGEGDMV 357
Query: 359 SELKLPLVRIKVDYS 373
+EL PL+R++VDYS
Sbjct: 358 AELPKPLIRLRVDYS 372
>UNIPROTKB|F5GXT0 [details] [associations]
symbol:MRE11A "Double-strand break repair protein MRE11A"
species:9606 "Homo sapiens" [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
InterPro:IPR003701 InterPro:IPR004843 Pfam:PF00149 GO:GO:0006259
GO:GO:0004527 PANTHER:PTHR10139 HGNC:HGNC:7230 ChiTaRS:MRE11A
EMBL:AP000765 EMBL:AP000786 IPI:IPI01012347
ProteinModelPortal:F5GXT0 SMR:F5GXT0 Ensembl:ENST00000540013
ArrayExpress:F5GXT0 Bgee:F5GXT0 Uniprot:F5GXT0
Length = 221
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 124/223 (55%), Positives = 164/223 (73%)
Query: 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKP 67
D NT +ILVATD HLG+MEKD +R +D+F +EI +A++ EVDF+LLGGDLFHENKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKP 67
Query: 68 SRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFSIHG 126
SR TL +E+LR++C+ DRPVQF+++SDQ+VNF +KF VNY+D + N+ +PVFSIHG
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 127
Query: 127 NHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGN 186
NHDDP G D L A+DILS VN+FG+ + V +I + P+L++KGST +ALYGLG+
Sbjct: 128 NHDDPTGADALCALDILSCAGFVNHFGRSM----SVEKIDISPVLLQKGSTKIALYGLGS 183
Query: 187 IRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRV 229
I DERL RMF V +RP+ E + WFN+ V+HQNRV
Sbjct: 184 IPDERLYRMFVNKK-VTMLRPKEDE----NSWFNLFVIHQNRV 221
>UNIPROTKB|F5H256 [details] [associations]
symbol:MRE11A "Double-strand break repair protein MRE11A"
species:9606 "Homo sapiens" [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0000075 "cell cycle checkpoint" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=IEA] [GO:0007129 "synapsis" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] InterPro:IPR003701
InterPro:IPR004843 Pfam:PF00149 GO:GO:0048471 GO:GO:0005654
GO:GO:0007507 GO:GO:0008283 GO:GO:0000790 GO:GO:0004527
GO:GO:0006302 GO:GO:0000794 GO:GO:0000075 GO:GO:0007129
PANTHER:PTHR10139 HGNC:HGNC:7230 ChiTaRS:MRE11A EMBL:AP000765
EMBL:AP000786 IPI:IPI01010110 ProteinModelPortal:F5H256 SMR:F5H256
Ensembl:ENST00000536754 ArrayExpress:F5H256 Bgee:F5H256
Uniprot:F5H256
Length = 127
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 72/120 (60%), Positives = 96/120 (80%)
Query: 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKP 67
D NT +ILVATD HLG+MEKD +R +D+F +EI +A++ EVDF+LLGGDLFHENKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKP 67
Query: 68 SRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFSIHG 126
SR TL +E+LR++C+ DRPVQF+++SDQ+VNF +KF VNY+D + N+ +PVFSIHG
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 127
>UNIPROTKB|F5H742 [details] [associations]
symbol:MRE11A "Double-strand break repair protein MRE11A"
species:9606 "Homo sapiens" [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0000075 "cell cycle checkpoint" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=IEA] [GO:0007129 "synapsis" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] InterPro:IPR003701
InterPro:IPR004843 Pfam:PF00149 GO:GO:0048471 GO:GO:0005654
GO:GO:0007507 GO:GO:0008283 GO:GO:0000790 GO:GO:0004527
GO:GO:0006302 GO:GO:0000794 GO:GO:0000075 GO:GO:0007129
PANTHER:PTHR10139 HGNC:HGNC:7230 ChiTaRS:MRE11A EMBL:AP000765
EMBL:AP000786 IPI:IPI01009648 ProteinModelPortal:F5H742 SMR:F5H742
Ensembl:ENST00000538923 ArrayExpress:F5H742 Bgee:F5H742
Uniprot:F5H742
Length = 111
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 63/104 (60%), Positives = 83/104 (79%)
Query: 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKP 67
D NT +ILVATD HLG+MEKD +R +D+F +EI +A++ EVDF+LLGGDLFHENKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKP 67
Query: 68 SRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQ-NKFGHVNY 110
SR TL +E+LR++C+ DRPVQF+++SDQ+VNF +KF VNY
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNY 111
>UNIPROTKB|Q8U1N9 [details] [associations]
symbol:mre11 "DNA double-strand break repair protein Mre11"
species:186497 "Pyrococcus furiosus DSM 3638" [GO:0042802
"identical protein binding" evidence=IPI] InterPro:IPR003701
InterPro:IPR004843 Pfam:PF00149 GO:GO:0046872 DrugBank:DB00171
GO:GO:0006281 GO:GO:0004527 GO:GO:0090305 GO:GO:0004519
EMBL:AE009950 GenomeReviews:AE009950_GR eggNOG:COG0420
PANTHER:PTHR10139 RefSeq:NP_578895.1 PDB:1II7 PDB:1S8E PDB:3DSC
PDB:3DSD PDB:3QKR PDB:3QKS PDB:3QKU PDB:4HD0 PDBsum:1II7
PDBsum:1S8E PDBsum:3DSC PDBsum:3DSD PDBsum:3QKR PDBsum:3QKS
PDBsum:3QKU PDBsum:4HD0 ProteinModelPortal:Q8U1N9 SMR:Q8U1N9
DIP:DIP-52386N PRIDE:Q8U1N9 EnsemblBacteria:EBPYRT00000005854
GeneID:1469035 KEGG:pfu:PF1166 HOGENOM:HOG000073890 OMA:RWDFGDY
ProtClustDB:CLSK541619 EvolutionaryTrace:Q8U1N9 Uniprot:Q8U1N9
Length = 426
Score = 148 (57.2 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 20 DCHLGYMEKDEIRRHDSF-EAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEI 78
D HLGY + + +R + F EAF+ IA Q+ VDF+L+ GDLFH ++PS TL KAI +
Sbjct: 8 DIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIAL 67
Query: 79 LR 80
L+
Sbjct: 68 LQ 69
Score = 50 (22.7 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 119 LPVFSIHGNHD 129
+PVF+I GNHD
Sbjct: 76 IPVFAIEGNHD 86
>TIGR_CMR|GSU_1724 [details] [associations]
symbol:GSU_1724 "nuclease SbcCD, D subunit, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004527
"exonuclease activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004527
InterPro:IPR024654 Pfam:PF12850 RefSeq:NP_952774.1
ProteinModelPortal:Q74CF0 GeneID:2685333 KEGG:gsu:GSU1724
PATRIC:22026295 HOGENOM:HOG000065085 OMA:HDWIHRR
ProtClustDB:CLSK924531 BioCyc:GSUL243231:GH27-1676-MONOMER
Uniprot:Q74CF0
Length = 418
Score = 89 (36.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 27/71 (38%), Positives = 32/71 (45%)
Query: 14 RILVATDCHLG--YMEKD-EIRRH-DSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSR 69
R D HLG Y E R+ D F I S A VDFVL+ GDLFH +
Sbjct: 5 RFFHTADIHLGKTYRTSTGEAERYEDFFRMLGSIVSDAIAARVDFVLIAGDLFHTGQILP 64
Query: 70 STLVKAIEILR 80
T + IE L+
Sbjct: 65 RTFARTIETLQ 75
Score = 77 (32.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 59/230 (25%), Positives = 87/230 (37%)
Query: 113 PHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILI 172
P N G+P ++ GNHD D++S ++ LS + Y + + G P
Sbjct: 76 PLKNAGIPCIAVEGNHDWIHRRDSISWMEALSQ---MGYIHLLRPSRTETGGYRFSPFDY 132
Query: 173 RKGS------TAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQ 226
+G V +YGLG I + H + EA ++ NIL+ H
Sbjct: 133 EQGMGGHIEVNGVNIYGLGYIGTQA------GAHVARIC--EA-----ITTTNNILLFHV 179
Query: 227 NRVKTNPKNAIN---EHFLPR--FLDFVVWGHEHE-CLIDPQEVPGMGFHLTQPGSSVAT 280
+P N E LP D+V GH H+ +I E F+ PGS
Sbjct: 180 GVWTYSPVEIGNMKPEEALPLADVFDYVALGHGHKPYIIATPEGRAYAFN---PGSPECV 236
Query: 281 SLIEGESK-PKHVLLLEIKENQYRPTKIPLTSVRPFEYTEIILKDEADID 329
+ GE K K L+ + + Y P T+ RP T I L D +
Sbjct: 237 NF--GEEKYDKGYYLVTVNDGVYTHEFRP-TNPRPMLVTTIDLDGAGDAE 283
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.138 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 447 439 0.00089 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 611 (65 KB)
Total size of DFA: 281 KB (2147 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.69u 0.17s 37.86t Elapsed: 00:00:02
Total cpu time: 37.70u 0.17s 37.87t Elapsed: 00:00:02
Start: Fri May 10 02:35:03 2013 End: Fri May 10 02:35:05 2013