Query 013207
Match_columns 447
No_of_seqs 365 out of 2213
Neff 7.2
Searched_HMMs 13730
Date Mon Mar 25 06:13:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013207.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013207hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ii7a_ d.159.1.4 (A:) Mre11 { 100.0 2.1E-33 1.6E-37 274.2 24.9 258 13-322 1-280 (333)
2 d2yvta1 d.159.1.6 (A:4-260) Un 99.8 5.3E-21 3.9E-25 178.4 12.4 215 12-307 2-256 (257)
3 d2hy1a1 d.159.1.11 (A:10-265) 99.8 7.3E-21 5.3E-25 180.3 10.7 226 11-308 3-256 (256)
4 d1uf3a_ d.159.1.6 (A:) Hypothe 99.8 8.9E-20 6.5E-24 167.4 11.8 213 11-306 4-226 (228)
5 d3d03a1 d.159.1.11 (A:1-271) G 99.8 8.3E-19 6.1E-23 167.9 17.5 243 13-317 1-263 (271)
6 d1z2wa1 d.159.1.7 (A:1-182) Va 99.6 5.3E-15 3.9E-19 133.6 13.5 74 244-322 106-179 (182)
7 d1s3la_ d.159.1.7 (A:) Putativ 99.6 4.6E-15 3.3E-19 131.4 10.7 160 13-302 1-160 (165)
8 d2a22a1 d.159.1.7 (A:4-196) Va 99.5 3.6E-14 2.6E-18 129.1 14.7 91 217-311 90-181 (193)
9 d2nxfa1 d.159.1.12 (A:3-322) U 99.5 5.3E-14 3.8E-18 132.8 14.8 89 12-131 3-98 (320)
10 d1su1a_ d.159.1.7 (A:) Phospho 99.5 2E-13 1.5E-17 121.9 14.4 42 12-65 1-42 (184)
11 d1nnwa_ d.159.1.5 (A:) Hypothe 99.4 1.9E-13 1.4E-17 126.5 10.6 84 217-307 129-221 (251)
12 d3ck2a1 d.159.1.7 (A:1-173) Un 99.4 1.8E-12 1.3E-16 115.7 15.1 60 244-310 101-160 (173)
13 d1utea_ d.159.1.1 (A:) Mammali 99.4 1.1E-11 8.2E-16 117.4 18.2 257 10-318 2-296 (302)
14 d2qfra2 d.159.1.1 (A:121-432) 98.9 8E-09 5.8E-13 99.9 16.9 78 10-131 5-85 (312)
15 d1usha2 d.159.1.2 (A:26-362) 5 98.9 1.3E-07 9.1E-12 92.3 22.7 56 10-65 6-64 (337)
16 d1xm7a_ d.159.1.8 (A:) Hypothe 98.2 9.5E-07 6.9E-11 78.8 6.3 78 15-131 4-84 (188)
17 d2z1aa2 d.159.1.2 (A:28-329) 5 98.0 0.00012 8.9E-09 69.4 19.0 54 12-65 2-61 (302)
18 d3c9fa2 d.159.1.2 (A:16-337) 5 97.9 3.1E-06 2.3E-10 81.6 5.6 55 11-65 10-70 (322)
19 d1g5ba_ d.159.1.3 (A:) lambda 97.7 1.1E-05 7.7E-10 72.6 3.8 45 14-70 14-59 (219)
20 d1jk7a_ d.159.1.3 (A:) Protein 93.4 0.066 4.8E-06 49.7 7.2 50 14-75 53-102 (294)
21 d3c5wc1 d.159.1.3 (C:6-293) Pr 93.2 0.091 6.6E-06 48.6 7.8 50 14-75 46-95 (288)
22 d1s95a_ d.159.1.3 (A:) Serine/ 92.2 0.17 1.2E-05 47.4 8.2 48 14-73 61-109 (324)
23 d1auia_ d.159.1.3 (A:) Protein 91.9 0.16 1.2E-05 50.0 7.8 48 15-74 72-119 (473)
24 d1jmva_ c.26.2.4 (A:) Universa 69.2 5.8 0.00042 30.5 7.0 20 39-58 90-109 (140)
25 d1mjha_ c.26.2.4 (A:) "Hypothe 59.1 10 0.00073 29.8 6.7 18 41-58 108-125 (160)
26 d1gg4a1 c.59.1.1 (A:313-447) U 48.0 14 0.001 28.8 5.8 42 13-62 41-82 (135)
27 d1t71a_ d.159.1.9 (A:) Hypothe 44.1 25 0.0018 31.3 7.2 51 10-70 2-54 (281)
28 d2z3va1 c.26.2.4 (A:2-136) Hyp 42.1 29 0.0021 26.0 6.7 19 40-58 87-105 (135)
29 d1t70a_ d.159.1.9 (A:) Putativ 40.2 52 0.0038 28.6 8.7 47 13-70 1-48 (255)
30 d2a9pa1 c.23.1.1 (A:2-118) DNA 38.7 39 0.0029 25.0 6.9 19 40-58 33-51 (117)
31 d1w25a1 c.23.1.1 (A:2-140) Res 38.5 28 0.002 26.8 6.1 18 40-57 34-51 (139)
32 d2vvpa1 c.121.1.1 (A:3-158) Al 37.7 43 0.0031 26.9 7.2 40 12-64 1-40 (156)
33 d2vgna3 d.79.3.2 (A:278-381) D 37.3 24 0.0017 26.4 5.2 59 40-132 25-83 (104)
34 d1mb3a_ c.23.1.1 (A:) Cell div 35.7 40 0.0029 25.1 6.6 55 41-132 35-89 (123)
35 d1ys7a2 c.23.1.1 (A:7-127) Tra 33.7 85 0.0062 23.2 9.0 56 40-134 34-89 (121)
36 d1xhfa1 c.23.1.1 (A:2-122) Aer 33.7 41 0.003 25.2 6.2 19 40-58 35-53 (121)
37 d1uz5a3 c.57.1.2 (A:181-328) M 31.7 29 0.0021 27.4 5.2 26 35-61 51-76 (148)
38 d3bula2 c.23.6.1 (A:741-896) M 31.4 39 0.0029 27.0 6.0 40 39-82 45-84 (156)
39 d1v4va_ c.87.1.3 (A:) UDP-N-ac 30.9 34 0.0024 31.2 6.2 25 39-63 76-100 (373)
40 d1ny5a1 c.23.1.1 (A:1-137) Tra 30.5 37 0.0027 26.0 5.6 54 39-131 32-85 (137)
41 d1u0sy_ c.23.1.1 (Y:) CheY pro 30.3 43 0.0031 24.9 5.8 19 40-58 35-53 (118)
42 d1peya_ c.23.1.1 (A:) Sporulat 29.6 47 0.0035 24.6 6.0 22 40-61 34-55 (119)
43 d1i60a_ c.1.15.4 (A:) Hypothet 29.2 46 0.0033 28.2 6.6 71 12-83 59-129 (278)
44 d2gm3a1 c.26.2.4 (A:5-175) Put 27.5 33 0.0024 27.0 4.9 14 117-130 150-163 (171)
45 d1qkka_ c.23.1.1 (A:) Transcri 27.2 22 0.0016 27.6 3.5 53 40-131 33-85 (140)
46 d1p6qa_ c.23.1.1 (A:) CheY pro 26.5 91 0.0066 23.2 7.3 51 10-61 4-61 (129)
47 d1o6ca_ c.87.1.3 (A:) UDP-N-ac 26.4 40 0.0029 30.7 5.8 25 39-63 76-100 (377)
48 d2z06a1 d.159.1.10 (A:1-252) H 25.9 1.9E+02 0.014 24.7 16.6 47 13-70 1-48 (252)
49 d1jbea_ c.23.1.1 (A:) CheY pro 25.6 75 0.0055 23.7 6.6 51 12-63 4-61 (128)
50 d1zgza1 c.23.1.1 (A:2-121) Tor 24.7 93 0.0068 22.7 6.9 22 40-61 34-55 (120)
51 d2nqra3 c.57.1.2 (A:178-326) M 24.7 46 0.0033 26.2 5.2 30 35-65 51-80 (149)
52 d2ayxa1 c.23.1.1 (A:817-949) S 24.7 82 0.006 23.7 6.7 56 9-64 5-65 (133)
53 d1zesa1 c.23.1.1 (A:3-123) Pho 24.4 63 0.0046 23.9 5.8 24 40-63 33-56 (121)
54 d1u6ka1 c.127.1.1 (A:2-283) F4 23.7 2.1E+02 0.015 24.4 9.7 87 10-151 30-116 (282)
55 d1x52a1 d.79.3.2 (A:8-118) Cel 23.1 21 0.0016 27.1 2.6 57 40-131 36-93 (111)
56 d1kgsa2 c.23.1.1 (A:2-123) Pho 23.1 93 0.0067 22.9 6.6 22 40-61 34-55 (122)
57 d3bzka5 c.55.3.13 (A:325-473) 22.9 1.5E+02 0.011 23.2 8.0 40 37-81 45-84 (149)
58 d1w3ex1 d.79.3.1 (X:1-98) Euka 22.8 44 0.0032 24.4 4.4 22 40-61 20-41 (98)
59 d1ccwa_ c.23.6.1 (A:) Glutamat 22.7 50 0.0037 25.6 4.9 39 39-81 42-80 (137)
60 d1xrsb1 c.23.6.1 (B:102-261) D 22.0 77 0.0056 25.2 6.1 42 39-81 67-108 (160)
61 d1nn4a_ c.121.1.1 (A:) Alterna 21.7 76 0.0055 25.4 6.0 44 7-63 9-52 (159)
62 d7reqa2 c.23.6.1 (A:561-728) M 21.2 63 0.0046 26.0 5.4 41 38-82 75-115 (168)
63 d1gg4a1 c.59.1.1 (A:313-447) U 21.0 93 0.0068 23.6 6.3 45 37-81 25-69 (135)
64 d1t0kb_ d.79.3.1 (B:) Eukaryot 20.7 1.4E+02 0.01 21.2 7.2 22 40-61 19-40 (97)
65 d1gsoa2 c.30.1.1 (A:-2-103) Gl 20.5 33 0.0024 25.6 3.2 20 39-58 54-73 (105)
66 d1f6da_ c.87.1.3 (A:) UDP-N-ac 20.4 55 0.004 29.7 5.5 25 39-63 74-98 (376)
67 d2pl1a1 c.23.1.1 (A:1-119) Pho 20.1 1.4E+02 0.01 21.7 7.1 22 40-61 33-54 (119)
No 1
>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=100.00 E-value=2.1e-33 Score=274.23 Aligned_cols=258 Identities=26% Similarity=0.322 Sum_probs=181.8
Q ss_pred eEEEEEcCCCCCCCCC-cccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcce
Q 013207 13 VRILVATDCHLGYMEK-DEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQF 91 (447)
Q Consensus 13 mrILh~SD~HLG~~~~-~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~l~~~~~~~~~ 91 (447)
|||+|+||||||+... ...|.++.+.+|+++++.|++++||+||++|||||...|+..++..+.+.+..+.
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~-------- 72 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPK-------- 72 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHH--------
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHH--------
Confidence 8999999999998753 5678889999999999999999999999999999999999999888888888763
Q ss_pred eeechhhhcccccccccccCCCCCCCCCcEEEECCCCCCCCCCCcchhhhhhhcCCceEEecceeccCCCcceeEE----
Q 013207 92 QVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITV---- 167 (447)
Q Consensus 92 ~~lsd~~~~f~~~~~~~n~~d~~~~~~ipV~~I~GNHD~~~~~~~~~~~d~L~~~g~v~~fg~~~l~~~~~~~i~~---- 167 (447)
..++|||+|+||||.+.+.. +.+++++..+++++++........ ..+..
T Consensus 73 ------------------------~~~i~v~~i~GNHD~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 125 (333)
T d1ii7a_ 73 ------------------------EHSIPVFAIEGNHDRTQRGP--SVLNLLEDFGLVYVIGMRKEKVEN-EYLTSERLG 125 (333)
T ss_dssp ------------------------TTTCCEEEECCTTTCCSSSC--CHHHHHHHTTSCEECEEESSCCCS-SSEEEEECT
T ss_pred ------------------------hcCCcEEEeCCCCccccchh--hHHHHHHhCCceEEccCccccccc-ceecccccC
Confidence 45899999999999987764 577888888888887654211000 00000
Q ss_pred -EEEEEecCCeeEEEEecCCCChHHHHhhhcChhHHhhccchhhhhccccCceeEEEeecccccCC---CC--Ccccccc
Q 013207 168 -YPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTN---PK--NAINEHF 241 (447)
Q Consensus 168 -~Pi~l~~g~~~vaiyGl~~~~~~~l~~~~~~~~~v~~l~p~~~~~~~~~~~~~Ill~H~~~~~~~---~~--~~i~~~~ 241 (447)
.+..+......+.++|+++.......... ...... ......+|+++|+...+.. .. ..+....
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~ 194 (333)
T d1ii7a_ 126 NGEYLVKGVYKDLEIHGMKYMSSAWFEANK---EILKRL--------FRPTDNAILMLHQGVREVSEARGEDYFEIGLGD 194 (333)
T ss_dssp TSCEEEEEEETTEEEEEECCCCHHHHHSST---THHHHH--------CCCCSSEEEEEECCBHHHHHTTTCCCCSBCGGG
T ss_pred cceeEeecccCcceeccccchhHHHHHHHH---hhhhhh--------cCCCccceEEEeeccccccccccccceeccccc
Confidence 11222222335778888888765432111 011110 1235789999998775421 11 1223455
Q ss_pred cccCCcEEEeccccCcccCCcccCCCCceEeccCCccccccccCccCCceEEEEEEeCCe-----------eEEEEEECC
Q 013207 242 LPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQ-----------YRPTKIPLT 310 (447)
Q Consensus 242 ~~~~~D~v~~GH~H~~~i~pq~~~~~~~~i~ypGS~~~~s~~e~E~~~Kg~~lvei~~~~-----------~~~~~i~L~ 310 (447)
++.++|||++||+|+++. ....+..++|||||++++|+|. ...+++.++++..+. .+.++++++
T Consensus 195 ~~~~~d~v~lGH~H~~~~----~~~~~~~i~y~GS~~~~~~~E~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (333)
T d1ii7a_ 195 LPEGYLYYALGHIHKRYE----TSYSGSPVVYPGSLERWDFGDY-EVRYEWDGIKFKERYGVNKGFYIVEDFKPRFVEIK 269 (333)
T ss_dssp SCTTCSEEEEESCSSCEE----EEETTEEEEECCCSSCCSGGGC-SEEEEECSSSEEEEECCCCEEEEEETTEEEEEECC
T ss_pred CccccceEEecCcccceE----EeeCCeEEEEeCCceeeccccc-cccCceEEEEEecCcccccceEEcccCceeEEECC
Confidence 678899999999999754 3334578999999999999975 445666666555432 256778887
Q ss_pred CCCcEEEEEEEe
Q 013207 311 SVRPFEYTEIIL 322 (447)
Q Consensus 311 ~~Rpf~~~~i~l 322 (447)
.||+...++..
T Consensus 270 -~~~~~~~~~~~ 280 (333)
T d1ii7a_ 270 -VRPFIDVKIKG 280 (333)
T ss_dssp -CCCEEEEEEEE
T ss_pred -ccceEEEEEcC
Confidence 68887766654
No 2
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]}
Probab=99.83 E-value=5.3e-21 Score=178.39 Aligned_cols=215 Identities=11% Similarity=0.160 Sum_probs=120.7
Q ss_pred ceEEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHH------------------
Q 013207 12 TVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLV------------------ 73 (447)
Q Consensus 12 ~mrILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~------------------ 73 (447)
..|||++||+|.. +.+|+++++.+.+++||+||++|||||...++.....
T Consensus 2 ~~ri~~isD~h~~------------~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 69 (257)
T d2yvta1 2 PRKVLAIKNFKER------------FDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEH 69 (257)
T ss_dssp CCEEEEEECCTTC------------GGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHH
T ss_pred CcEEEEEeCCCCC------------HHHHHHHHHHHhhcCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccc
Confidence 4799999999953 4568999999999999999999999998766653211
Q ss_pred ----HHHHHHHHhhcCCCCcceeeechhhhcccccccccccCCCCCCCCCcEEEECCCCCCCCCCCcchhhhhhhcCC--
Q 013207 74 ----KAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACN-- 147 (447)
Q Consensus 74 ----~~~~~L~~l~~~~~~~~~~~lsd~~~~f~~~~~~~n~~d~~~~~~ipV~~I~GNHD~~~~~~~~~~~d~L~~~g-- 147 (447)
.+..+++++. +.++|||+|+||||.+... +....+....
T Consensus 70 ~d~~~~~~~~~~L~--------------------------------~~~~pv~~i~GNHD~~~~~---~~~~~~~~~~~~ 114 (257)
T d2yvta1 70 YIIETLDKFFREIG--------------------------------ELGVKTFVVPGKNDAPLKI---FLRAAYEAETAY 114 (257)
T ss_dssp HHHHHHHHHHHHHH--------------------------------TTCSEEEEECCTTSCCHHH---HHHHHHHTTTTC
T ss_pred cchhhHHHHHHHHH--------------------------------hcCCcEEEEeCCCcchhhH---HHHHhccccccc
Confidence 1122222221 4689999999999986432 1222222111
Q ss_pred -ceEEecceeccCCCcceeEEEEEEEecCCeeEEEEecCCCChHH----HHhhhcChhHHhhccchhhhhccccCceeEE
Q 013207 148 -LVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGNIRDER----LNRMFQTPHAVQWMRPEAQEECQVSDWFNIL 222 (447)
Q Consensus 148 -~v~~fg~~~l~~~~~~~i~~~Pi~l~~g~~~vaiyGl~~~~~~~----l~~~~~~~~~v~~l~p~~~~~~~~~~~~~Il 222 (447)
....... ..+.+ .+ .+.+.|+++..+.. ............++..... .....++|+
T Consensus 115 ~~~~~~~~-------------~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Il 175 (257)
T d2yvta1 115 PNIRVLHE-------------GFAGW-RG--EFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVN---ELKPRRLVT 175 (257)
T ss_dssp TTEEECSS-------------EEEEE-TT--TEEEEEECSEEESSCCBSSSSCEEEHHHHHHHGGGGG---GSCCCEEEE
T ss_pred cccccccc-------------eeEEe-cC--CeEEEEeccccCCccccchhhhhhhhhHHHHHHHHhh---hcccccEEE
Confidence 1111110 01111 22 23334433211000 0000000000011111111 123678999
Q ss_pred EeecccccCCCCC----c-------ccccccccCCcEEEeccccCcccCCcccCCCCceEeccCCccccccccCccCCce
Q 013207 223 VLHQNRVKTNPKN----A-------INEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKH 291 (447)
Q Consensus 223 l~H~~~~~~~~~~----~-------i~~~~~~~~~D~v~~GH~H~~~i~pq~~~~~~~~i~ypGS~~~~s~~e~E~~~Kg 291 (447)
++|++..+..... . +.+.+...+++||++||+|+++. .. ++.+++||||. . .++
T Consensus 176 ~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~~~---~~--g~~~~~~pGs~-----~-----~g~ 240 (257)
T d2yvta1 176 IFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHE---LV--GNTIVVNPGEF-----E-----EGR 240 (257)
T ss_dssp EESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEEE---EE--TTEEEEECCBG-----G-----GTE
T ss_pred EEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCCeE---ec--CCeEEEECCcc-----c-----cCE
Confidence 9999886532110 0 11112345789999999999642 22 35789999964 2 246
Q ss_pred EEEEEEeCCeeEEEEE
Q 013207 292 VLLLEIKENQYRPTKI 307 (447)
Q Consensus 292 ~~lvei~~~~~~~~~i 307 (447)
++++++.++.++++.+
T Consensus 241 y~~id~~~~~i~~~~~ 256 (257)
T d2yvta1 241 YAFLDLTQHKIKLEQF 256 (257)
T ss_dssp EEEEETTTTEEEEEEC
T ss_pred EEEEEEeCCEEEEEEC
Confidence 8999999988877653
No 3
>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.82 E-value=7.3e-21 Score=180.33 Aligned_cols=226 Identities=18% Similarity=0.226 Sum_probs=119.3
Q ss_pred CceEEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHc--CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCC
Q 013207 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK--EVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRP 88 (447)
Q Consensus 11 ~~mrILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~--~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~l~~~~~~ 88 (447)
..|||+|+||+||+....+..+..+..+.|+++++.+++. +||+||++|||++...+ ....++.+++.++..
T Consensus 3 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~~--~~~~~~~~~l~~~~~---- 76 (256)
T d2hy1a1 3 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEP--AAYRKLRGLVEPFAA---- 76 (256)
T ss_dssp CSEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCCH--HHHHHHHHHHHHHHH----
T ss_pred CCEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCh--hHHHHHHHHhhhhhh----
Confidence 3699999999999876554455567778899999988764 79999999999997754 344445566654320
Q ss_pred cceeeechhhhcccccccccccCCCCCCCCCcEEEECCCCCCCCCCCcchhhhhhhcCCceEEecceeccCCCcceeEEE
Q 013207 89 VQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVY 168 (447)
Q Consensus 89 ~~~~~lsd~~~~f~~~~~~~n~~d~~~~~~ipV~~I~GNHD~~~~~~~~~~~d~L~~~g~v~~fg~~~l~~~~~~~i~~~ 168 (447)
..++|+++|+||||.... ....+..... .++. + .
T Consensus 77 ---------------------------~~~~p~~~v~GNHD~~~~-----~~~~~~~~~~--~~~~----------~--~ 110 (256)
T d2hy1a1 77 ---------------------------QLGAELVWVMGNHDDRAE-----LRKFLLDEAP--SMAP----------L--D 110 (256)
T ss_dssp ---------------------------HHTCEEEECCCTTSCHHH-----HHHHTTCCCC--CCSC----------C--C
T ss_pred ---------------------------hcCCCEEEEcccccchhh-----hhhhhccccc--cccc----------c--c
Confidence 237899999999996421 1111211000 0000 0 0
Q ss_pred EEEEecCCeeEEEEecC---------CCChHHHHhhhcChhHHhhccchhhhhccccCceeEEEeecccccCCCC-----
Q 013207 169 PILIRKGSTAVALYGLG---------NIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPK----- 234 (447)
Q Consensus 169 Pi~l~~g~~~vaiyGl~---------~~~~~~l~~~~~~~~~v~~l~p~~~~~~~~~~~~~Ill~H~~~~~~~~~----- 234 (447)
.... .+ .+.++++. +..+ +.++|+...... .++...|+++|++....+..
T Consensus 111 ~~~~-~~--~~~~~~ldt~~~~~~~g~~~~----------~~~~wl~~~L~~---~~~~~~iv~~Hhpp~~~~~~~~~~~ 174 (256)
T d2hy1a1 111 RVCM-ID--GLRIIVLDTSVPGHHHGEIRA----------SQLGWLAEELAT---PAPDGTILALHHPPIPSVLDMAVTV 174 (256)
T ss_dssp EEEE-ET--TEEEEECCCBCTTCSSBCCCH----------HHHHHHHHHHTS---CCTTCEEEECSSCSSCCSSHHHHTT
T ss_pred eEEE-ec--ccceeeeeeeecCCcCCcccH----------HHHHHHHHHHHh---hhccCceeeeecCCccccccccccc
Confidence 0111 11 12333332 2222 334555544432 23567899999887543211
Q ss_pred -----CcccccccccCCcEEEeccccCcccCCcccCCCCceEeccCCc-cccccc------cCccCCceEEEEEEeCCee
Q 013207 235 -----NAINEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSS-VATSLI------EGESKPKHVLLLEIKENQY 302 (447)
Q Consensus 235 -----~~i~~~~~~~~~D~v~~GH~H~~~i~pq~~~~~~~~i~ypGS~-~~~s~~------e~E~~~Kg~~lvei~~~~~ 302 (447)
..+.+-+...+++++++||+|..... ... +..++..||+ .+..+. ..+..++|+.++++.++++
T Consensus 175 ~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~--~~~--gi~~~~~~s~~~~~~~~~~~~~~~~~~~~~g~~lv~v~~d~~ 250 (256)
T d2hy1a1 175 ELRDQAALGRVLRGTDVRAILAGHLHYSTNA--TFV--GIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDTV 250 (256)
T ss_dssp SBCCHHHHHHHHTTSSEEEEEECSSSSCEEE--EET--TEEEEECCCCC-------------------CEEEEEECSSCE
T ss_pred ccccHHHHHHHHhccCceEEEccccchhhce--EEC--CEEEEEcCCccccccccCCCCCcccccCCCCEEEEEEECCCE
Confidence 01111122346899999999985421 122 2333334443 221111 1124567999999999887
Q ss_pred EEEEEE
Q 013207 303 RPTKIP 308 (447)
Q Consensus 303 ~~~~i~ 308 (447)
..+.||
T Consensus 251 ~~~~iP 256 (256)
T d2hy1a1 251 VHSVIP 256 (256)
T ss_dssp EEEEEC
T ss_pred EEEeCC
Confidence 777665
No 4
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]}
Probab=99.80 E-value=8.9e-20 Score=167.39 Aligned_cols=213 Identities=16% Similarity=0.189 Sum_probs=118.7
Q ss_pred CceEEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcc
Q 013207 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQ 90 (447)
Q Consensus 11 ~~mrILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~l~~~~~~~~ 90 (447)
...+||.+||+|-. +++|+++++.|.++++|+|+++|||++...++.+. ..+++.+.
T Consensus 4 ~~~~i~~~sd~hg~------------~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~----~~~~~~L~------- 60 (228)
T d1uf3a_ 4 TVRYILATSNPMGD------------LEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDY----AAFFRILS------- 60 (228)
T ss_dssp CCCEEEEEECCTTC------------HHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHH----HHHHHHHG-------
T ss_pred cccEEEEEeCCCCC------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHH----HHhhhhhc-------
Confidence 46899999999965 78999999999999999999999999988655542 23444331
Q ss_pred eeeechhhhcccccccccccCCCCCCCCCcEEEECCCCCCCCCCCcchhhhhhhcCCceEEecceeccCCCcceeEEEEE
Q 013207 91 FQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPI 170 (447)
Q Consensus 91 ~~~lsd~~~~f~~~~~~~n~~d~~~~~~ipV~~I~GNHD~~~~~~~~~~~d~L~~~g~v~~fg~~~l~~~~~~~i~~~Pi 170 (447)
..++|+++|+||||.+....................... . .
T Consensus 61 -------------------------~~~~pv~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~---------~-----~ 101 (228)
T d1uf3a_ 61 -------------------------EAHLPTAYVPGPQDAPIWEYLREAANVELVHPEMRNVHE---------T-----F 101 (228)
T ss_dssp -------------------------GGCSCEEEECCTTSCSHHHHHHHHHHHHHHCTTEEECBT---------S-----E
T ss_pred -------------------------cccceEEEEecCCCchhhhhhhhhcccccccccccccce---------e-----e
Confidence 347899999999998654311111111111111101000 0 0
Q ss_pred EEecCCeeEEEEecCCC------ChHHHHhhhcChhHHhhccchhhhhccccCceeEEEeecccccCCCC----Cccccc
Q 013207 171 LIRKGSTAVALYGLGNI------RDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPK----NAINEH 240 (447)
Q Consensus 171 ~l~~g~~~vaiyGl~~~------~~~~l~~~~~~~~~v~~l~p~~~~~~~~~~~~~Ill~H~~~~~~~~~----~~i~~~ 240 (447)
....+. +.+.|++.. .......... .....++...... ....+.|++.|.+..+.... ..+.+.
T Consensus 102 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~---~~~~~~il~~H~p~~~~~~~~~~~~~~~~~ 175 (228)
T d1uf3a_ 102 TFWRGP--YLVAGVGGEIADEGEPEEHEALRYP-AWVAEYRLKALWE---LKDYPKIFLFHTMPYHKGLNEQGSHEVAHL 175 (228)
T ss_dssp EEETTT--EEEEEECSEEESSSCCBSSSSCEEE-HHHHHHHHGGGGG---SCSCCEEEEESSCBCBTTTBTTSBHHHHHH
T ss_pred eeccCC--EEEEecCCccccCcCcchhhhhhhh-HHHHHHHHHHHhh---ccCCceEEEEeeeccCccccccccHHHHHH
Confidence 111111 122222110 0000000000 0112222222111 23567899999987553211 111122
Q ss_pred ccccCCcEEEeccccCcccCCcccCCCCceEeccCCccccccccCccCCceEEEEEEeCCeeEEEE
Q 013207 241 FLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTK 306 (447)
Q Consensus 241 ~~~~~~D~v~~GH~H~~~i~pq~~~~~~~~i~ypGS~~~~s~~e~E~~~Kg~~lvei~~~~~~~~~ 306 (447)
+....+||+++||+|..+ ... ++.++++|||.. + ..+.++++.++++++..
T Consensus 176 ~~~~~~~lvl~GH~H~~~----~~~-g~~~~v~pG~~~-----~-----g~y~~i~~~~~~ie~~~ 226 (228)
T d1uf3a_ 176 IKTHNPLLVLVAGKGQKH----EML-GASWVVVPGDLS-----E-----GEYSLLDLRARKLETGN 226 (228)
T ss_dssp HHHHCCSEEEECCSSCEE----EEE-TTEEEEECCBGG-----G-----TEEEEEETTTTEEEEEE
T ss_pred HHhcCCcEEEEcccccch----hcc-CCEEEEECCccc-----c-----ceEEEEEccCCEEEEEe
Confidence 223468999999999854 222 357899999752 2 24789999988766554
No 5
>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]}
Probab=99.79 E-value=8.3e-19 Score=167.87 Aligned_cols=243 Identities=18% Similarity=0.256 Sum_probs=135.0
Q ss_pred eEEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHH--cCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcc
Q 013207 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQ--KEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQ 90 (447)
Q Consensus 13 mrILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~--~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~l~~~~~~~~ 90 (447)
|||+|+||+|++.......+..+....|+++++.+++ .++|+||++|||+|... .++...+.++|++
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~--~~~y~~~~~~l~~--------- 69 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR--PEEYQVARQILGS--------- 69 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC--HHHHHHHHHHHTT---------
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCCc--chhHHHHHHHHhc---------
Confidence 8999999999987655455666777889999998765 58999999999999764 4444445555543
Q ss_pred eeeechhhhcccccccccccCCCCCCCCCcEEEECCCCCCCCCCCcchhhhhhhcCCceEEecceeccCCCcceeEEEEE
Q 013207 91 FQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPI 170 (447)
Q Consensus 91 ~~~lsd~~~~f~~~~~~~n~~d~~~~~~ipV~~I~GNHD~~~~~~~~~~~d~L~~~g~v~~fg~~~l~~~~~~~i~~~Pi 170 (447)
.++|+++|+||||..... .+.+..... ..+.. ..... .
T Consensus 70 --------------------------l~~p~~~i~GNHD~~~~~-----~~~~~~~~~--~~~~~------~~~~~---~ 107 (271)
T d3d03a1 70 --------------------------LNYPLYLIPGNHDDKALF-----LEYLQPLCP--QLGSD------ANNMR---C 107 (271)
T ss_dssp --------------------------CSSCEEEECCTTSCHHHH-----HHHHGGGSG--GGCSC------GGGCC---E
T ss_pred --------------------------cCCCEEEEecCccchHHH-----HHHhhhhhh--ccccc------cCcce---E
Confidence 478999999999974321 111111000 00000 00000 1
Q ss_pred EEecCCeeEEEEecCCCChHHHHhhhcChhHHhhccchhhhhccccCceeEEEeecccccCCCC--Cccc----c---cc
Q 013207 171 LIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPK--NAIN----E---HF 241 (447)
Q Consensus 171 ~l~~g~~~vaiyGl~~~~~~~l~~~~~~~~~v~~l~p~~~~~~~~~~~~~Ill~H~~~~~~~~~--~~i~----~---~~ 241 (447)
.+..+ .+.++++.......-...+.+ +.++|++....+. ++...|+++|++....+.. +.+. + ++
T Consensus 108 ~~~~~--~~~~i~ldt~~~~~~~~~l~~-~ql~wL~~~L~~~---~~~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~ 181 (271)
T d3d03a1 108 AVDDF--ATRLLFIDSSRAGTSKGWLTD-ETISWLEAQLFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLAL 181 (271)
T ss_dssp EECSS--SSEEEECCCCCTTCSSBCCCH-HHHHHHHHHHHHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHH
T ss_pred EEecC--CeEEEecccccCCCCcceecH-HHHHHHHHHHhhh---ccceeEEEeccCccccCccccccccccchHHHHHH
Confidence 11111 223334322111000000111 3445665444322 2456788889876543211 1110 1 12
Q ss_pred cc--cCCcEEEeccccCcccCCcccCCCCceEeccCCccccccccCc------cCCceEEEEEEeCCeeEEEEEECCC-C
Q 013207 242 LP--RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGE------SKPKHVLLLEIKENQYRPTKIPLTS-V 312 (447)
Q Consensus 242 ~~--~~~D~v~~GH~H~~~i~pq~~~~~~~~i~ypGS~~~~s~~e~E------~~~Kg~~lvei~~~~~~~~~i~L~~-~ 312 (447)
+. .+++++++||+|..... ... +...+..||+..+..+.... ..+.++.+....++++....+++.. .
T Consensus 182 l~~~~~v~~vl~GH~H~~~~~--~~~-g~~~~~~pst~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 258 (271)
T d3d03a1 182 VERFPSLTRIFCGHNHSLTMT--QYR-QALISTLPGTVHQVPYCHADTDPYYDLSPASCLMHRQVGEQWVSYQHSLAHYA 258 (271)
T ss_dssp HHHCTTEEEEEECSSSSCEEE--EET-TEEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEEEEETTEEEEEEEECSCCS
T ss_pred HHhcCCeEEEEeCCcchhhce--EEC-CEEEEEcCCceeecccCCCCCCcccccCCCEEEEEEEeCCCEEEEEEecCCCC
Confidence 22 36899999999986542 222 22345566665554443221 2467888888888887677777743 4
Q ss_pred CcEEE
Q 013207 313 RPFEY 317 (447)
Q Consensus 313 Rpf~~ 317 (447)
-||.+
T Consensus 259 gp~~f 263 (271)
T d3d03a1 259 GPWLY 263 (271)
T ss_dssp CCEEC
T ss_pred CCcCC
Confidence 45544
No 6
>d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.58 E-value=5.3e-15 Score=133.60 Aligned_cols=74 Identities=16% Similarity=0.130 Sum_probs=50.3
Q ss_pred cCCcEEEeccccCcccCCcccCCCCceEeccCCccccccccCccCCceEEEEEEeCCeeEEEEEECCCCCcEEEEEEEe
Q 013207 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPLTSVRPFEYTEIIL 322 (447)
Q Consensus 244 ~~~D~v~~GH~H~~~i~pq~~~~~~~~i~ypGS~~~~s~~e~E~~~Kg~~lvei~~~~~~~~~i~L~~~Rpf~~~~i~l 322 (447)
..+|++++||+|.+.+. +. ++..+++|||+..-.-..+.....+|++++++++++.+....|.. -.....+++.
T Consensus 106 ~~~divi~GHTH~p~~~--~~--~~~~~iNPGSv~~pr~~~~~~~~~syaild~~~~~v~~~~~~l~~-~~v~~~~~~~ 179 (182)
T d1z2wa1 106 FDVDILISGHTHKFEAF--EH--ENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIG-DDVKVERIEY 179 (182)
T ss_dssp HSSSEEECCSSCCCEEE--EE--TTEEEEECCCTTCCCCSSCSCCCCEEEEEEEETTEEEEEEEEEET-TEEEEEEEEE
T ss_pred cCCCEEEECCcCcceEE--EE--CCEEEEeCCCCCCCCCCCCCCCCCEEEEEEEeCCEEEEEEEEecC-CcEEEEEEEE
Confidence 46899999999997653 22 457899999975432211112345899999999998887777753 3344444443
No 7
>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]}
Probab=99.56 E-value=4.6e-15 Score=131.44 Aligned_cols=160 Identities=19% Similarity=0.326 Sum_probs=101.6
Q ss_pred eEEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCccee
Q 013207 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQ 92 (447)
Q Consensus 13 mrILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~l~~~~~~~~~~ 92 (447)
|||+++||+|-. ..+|+++++.+++++||.|+++||+++. . ..+.++
T Consensus 1 MkI~iiSDiHgn------------~~al~~vl~~~~~~~~D~ii~~GD~~~~-----~----~~~~l~------------ 47 (165)
T d1s3la_ 1 MKIGIMSDTHDH------------LPNIRKAIEIFNDENVETVIHCGDFVSL-----F----VIKEFE------------ 47 (165)
T ss_dssp CEEEEECCCTTC------------HHHHHHHHHHHHHSCCSEEEECSCCCST-----H----HHHHGG------------
T ss_pred CEEEEEEeCCCC------------HHHHHHHHHHHHhcCCCEEEECCCccCH-----H----HHHHHh------------
Confidence 899999999943 6789999999999999999999999852 1 223333
Q ss_pred eechhhhcccccccccccCCCCCCCCCcEEEECCCCCCCCCCCcchhhhhhhcCCceEEecceeccCCCcceeEEEEEEE
Q 013207 93 VVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPILI 172 (447)
Q Consensus 93 ~lsd~~~~f~~~~~~~n~~d~~~~~~ipV~~I~GNHD~~~~~~~~~~~d~L~~~g~v~~fg~~~l~~~~~~~i~~~Pi~l 172 (447)
....|++++.||||..... ....++.... . . ..|-..
T Consensus 48 -----------------------~~~~~~~~v~GN~D~~~~~----~~~~~~~~~~-----------~---~--~~~~~~ 84 (165)
T d1s3la_ 48 -----------------------NLNANIIATYGNNDGERCK----LKEWLKDINE-----------E---N--IIDDFI 84 (165)
T ss_dssp -----------------------GCSSEEEEECCTTCCCHHH----HHHHHHHHCT-----------T---C--EEESEE
T ss_pred -----------------------hcCccEEEEcccccccchh----hhHhhhhhcc-----------c---c--cCChhh
Confidence 2357999999999975321 1111110000 0 0 000000
Q ss_pred ecCCeeEEEEecCCCChHHHHhhhcChhHHhhccchhhhhccccCceeEEEeecccccCCCCCcccccccccCCcEEEec
Q 013207 173 RKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFLDFVVWG 252 (447)
Q Consensus 173 ~~g~~~vaiyGl~~~~~~~l~~~~~~~~~v~~l~p~~~~~~~~~~~~~Ill~H~~~~~~~~~~~i~~~~~~~~~D~v~~G 252 (447)
. + .-+..+|+++|++... .....+.....|++++|
T Consensus 85 -------~------------------------~---------~~~~~~i~l~Hg~~~~-----~~~~~~~~~~~d~v~~G 119 (165)
T d1s3la_ 85 -------S------------------------V---------EIDDLKFFITHGHHQS-----VLEMAIKSGLYDVVIYG 119 (165)
T ss_dssp -------E------------------------E---------EETTEEEEEEESCCHH-----HHHHHHHHSCCSEEEEE
T ss_pred -------c------------------------e---------EECCcEEEEEECCccc-----HHHHHhhcCCCCEEEEC
Confidence 0 0 0135689999975421 11111223468999999
Q ss_pred cccCcccCCcccCCCCceEeccCCccccccccCccCCceEEEEEEeCCee
Q 013207 253 HEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQY 302 (447)
Q Consensus 253 H~H~~~i~pq~~~~~~~~i~ypGS~~~~s~~e~E~~~Kg~~lvei~~~~~ 302 (447)
|+|.+.+. +. ++..+++|||.... + .+..++++++++.+++
T Consensus 120 HtH~~~~~--~~--~~~~~iNPGSvg~p-~----~~~~s~~ild~~~~~~ 160 (165)
T d1s3la_ 120 HTHERVFE--EV--DDVLVINPGECCGY-L----TGIPTIGILDTEKKEY 160 (165)
T ss_dssp CSSCCEEE--EE--TTEEEEECCCSSCT-T----TSCCEEEEEETTTTEE
T ss_pred CcCcceEE--EE--CCEEEEECCCCCCC-C----CCCCEEEEEEccCCeE
Confidence 99997653 22 45789999997532 2 2345899999988765
No 8
>d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]}
Probab=99.54 E-value=3.6e-14 Score=129.10 Aligned_cols=91 Identities=20% Similarity=0.237 Sum_probs=56.7
Q ss_pred CceeEEEeecccccC-CCCCcccccccccCCcEEEeccccCcccCCcccCCCCceEeccCCccccccccCccCCceEEEE
Q 013207 217 DWFNILVLHQNRVKT-NPKNAINEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLL 295 (447)
Q Consensus 217 ~~~~Ill~H~~~~~~-~~~~~i~~~~~~~~~D~v~~GH~H~~~i~pq~~~~~~~~i~ypGS~~~~s~~e~E~~~Kg~~lv 295 (447)
+.++|++.|...... +....+.+.+....+|++++||+|...+. .. ++..+++|||.....-........+|+++
T Consensus 90 ~~~~i~l~H~~~~~~~~~~~~l~~~~~~~~~dvvi~GHTH~~~~~--~~--~g~~~iNPGSvg~pr~~~~~~~~~syail 165 (193)
T d2a22a1 90 GEFKIGLMHGNQVLPWDDPGSLEQWQRRLDCDILVTGHTHKLRVF--EK--NGKLFLNPGTATGAFSALTPDAPPSFMLM 165 (193)
T ss_dssp TTEEEEEECSTTSSSTTCHHHHHHHHHHHTCSEEEECSSCCCEEE--EE--TTEEEEECCCSSCCCCTTSTTCCCEEEEE
T ss_pred CCEEEEEEeccCCCCCCCHHHHHHHHhhcCCCEEEEcCccCceEE--EE--CCEEEEECCCCCcCcCCCCCCCCCEEEEE
Confidence 345777877643211 11111222222346899999999997653 22 45789999997543211112445699999
Q ss_pred EEeCCeeEEEEEECCC
Q 013207 296 EIKENQYRPTKIPLTS 311 (447)
Q Consensus 296 ei~~~~~~~~~i~L~~ 311 (447)
+++++++.++...+..
T Consensus 166 d~~~~~v~v~~y~l~~ 181 (193)
T d2a22a1 166 ALQGNKVVLYVYDLRD 181 (193)
T ss_dssp EEETTEEEEEEEEEET
T ss_pred EEECCEEEEEEEEecC
Confidence 9999998877776654
No 9
>d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]}
Probab=99.52 E-value=5.3e-14 Score=132.85 Aligned_cols=89 Identities=15% Similarity=0.192 Sum_probs=62.6
Q ss_pred ceEEEEEcCCCCCCCCCc-------ccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHhhc
Q 013207 12 TVRILVATDCHLGYMEKD-------EIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCL 84 (447)
Q Consensus 12 ~mrILh~SD~HLG~~~~~-------~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~l~~ 84 (447)
.|||+++||+|.|..+.+ ......+...++++++.+++++||+||++||+++...++.....+.++.+.+..
T Consensus 3 ~f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~- 81 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL- 81 (320)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHH-
T ss_pred eEEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHHHHH-
Confidence 499999999999854321 123346678899999999999999999999999976444332222222222210
Q ss_pred CCCCcceeeechhhhcccccccccccCCCCCCCCCcEEEECCCCCCC
Q 013207 85 NDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (447)
Q Consensus 85 ~~~~~~~~~lsd~~~~f~~~~~~~n~~d~~~~~~ipV~~I~GNHD~~ 131 (447)
. ..++|++.++||||..
T Consensus 82 ---------------------~---------~~~~p~~~v~GNHD~~ 98 (320)
T d2nxfa1 82 ---------------------D---------ACSVDVHHVWGNHEFY 98 (320)
T ss_dssp ---------------------H---------TTCSEEEECCCHHHHH
T ss_pred ---------------------H---------HcCCCEEEecccCccc
Confidence 0 3579999999999964
No 10
>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]}
Probab=99.48 E-value=2e-13 Score=121.90 Aligned_cols=42 Identities=19% Similarity=0.419 Sum_probs=38.0
Q ss_pred ceEEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCCC
Q 013207 12 TVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHEN 65 (447)
Q Consensus 12 ~mrILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~~ 65 (447)
||||+++||+|.. +.+|+++++.+.++++|.|+++||+++..
T Consensus 1 mMki~iiSDiHg~------------~~al~~vl~~~~~~~~D~iv~~GDiv~~g 42 (184)
T d1su1a_ 1 MMKLMFASDIHGS------------LPATERVLELFAQSGAQWLVILGDVLNHG 42 (184)
T ss_dssp CCEEEEECCCTTB------------HHHHHHHHHHHHHHTCSEEEECSCCSCCC
T ss_pred CcEEEEEeecCCC------------HHHHHHHHHHHhhcCCCEEEEcCcccccC
Confidence 7999999999932 57899999999999999999999999875
No 11
>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.43 E-value=1.9e-13 Score=126.55 Aligned_cols=84 Identities=6% Similarity=-0.040 Sum_probs=49.7
Q ss_pred CceeEEEeecccccCCCCCccc-------ccc--cccCCcEEEeccccCcccCCcccCCCCceEeccCCccccccccCcc
Q 013207 217 DWFNILVLHQNRVKTNPKNAIN-------EHF--LPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGES 287 (447)
Q Consensus 217 ~~~~Ill~H~~~~~~~~~~~i~-------~~~--~~~~~D~v~~GH~H~~~i~pq~~~~~~~~i~ypGS~~~~s~~e~E~ 287 (447)
...+++++|+...........+ +.. ...++|++++||+|..... .. .+..+++|||.... .. + .
T Consensus 129 ~~~~~~~~H~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~GHtH~~~~~--~~--~~~~~in~Gsvg~~-~~-g-~ 201 (251)
T d1nnwa_ 129 GGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDA--MT--RYGRVVCPGSVGFP-PG-K-E 201 (251)
T ss_dssp TTEEEEEESSCSSCTTTCCCCSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEE--EE--TTEEEEEECCSSSC-SS-S-S
T ss_pred CCCcEEEEecCccCcccchhhhhhHHHHHhhhcccccCceEEEEeccceEEEE--Ee--eeeecccccccccc-CC-C-C
Confidence 4578999998764321111111 111 1245899999999986542 22 35788999997433 32 2 2
Q ss_pred CCceEEEEEEeCCeeEEEEE
Q 013207 288 KPKHVLLLEIKENQYRPTKI 307 (447)
Q Consensus 288 ~~Kg~~lvei~~~~~~~~~i 307 (447)
...+++++|+++..+++..+
T Consensus 202 ~~~~y~i~d~~~~~~~~~~~ 221 (251)
T d1nnwa_ 202 HKATFALVDVDTLKPKFIEV 221 (251)
T ss_dssp CCEEEEEEETTTCCEEEEEE
T ss_pred CCCeEEEEEcCCCeEEEEEE
Confidence 34478888887655444333
No 12
>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=99.40 E-value=1.8e-12 Score=115.69 Aligned_cols=60 Identities=13% Similarity=0.063 Sum_probs=45.8
Q ss_pred cCCcEEEeccccCcccCCcccCCCCceEeccCCccccccccCccCCceEEEEEEeCCeeEEEEEECC
Q 013207 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPLT 310 (447)
Q Consensus 244 ~~~D~v~~GH~H~~~i~pq~~~~~~~~i~ypGS~~~~s~~e~E~~~Kg~~lvei~~~~~~~~~i~L~ 310 (447)
...|++++||+|.+... .. ++..+++|||..... . .....+|+++++++++++++++.++
T Consensus 101 ~~~dvvi~GHTH~p~~~--~~--~~~~~iNPGSvg~pr-~--~~~~~syail~~~~~~~~v~~~~~d 160 (173)
T d3ck2a1 101 EEAAICLYGHLHVPSAW--LE--GKILFLNPGSISQPR-G--TIRECLYARVEIDDSYFKVDFLTRD 160 (173)
T ss_dssp TTCSEEECCSSCCEEEE--EE--TTEEEEEECCSSSCC-T--TCCSCCEEEEEECSSEEEEEEECTT
T ss_pred cCCCEEEeCCcCcceEE--EE--CCEEEEECCCCCCCC-C--CCCCCEEEEEEEeCCEEEEEEEEeC
Confidence 46899999999997653 22 457899999985432 1 1345689999999999999998775
No 13
>d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.36 E-value=1.1e-11 Score=117.37 Aligned_cols=257 Identities=15% Similarity=0.137 Sum_probs=127.3
Q ss_pred CCceEEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-CCCHHHHHHHHHHHHHhhcCCCC
Q 013207 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHEN-KPSRSTLVKAIEILRRHCLNDRP 88 (447)
Q Consensus 10 ~~~mrILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~~-~ps~~~l~~~~~~L~~l~~~~~~ 88 (447)
...+||++++|+|.+..... ........+..+.+.+.+++|||||++||++... ..+... .+..+.+...
T Consensus 2 ~~~~~F~vigD~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~-~~~~~~~~~~------ 72 (302)
T d1utea_ 2 TPILRFVAVGDWGGVPNAPF--HTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKD-KRFQETFEDV------ 72 (302)
T ss_dssp CCCEEEEEECSCCCCSSTTS--SCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTC-THHHHHTTTT------
T ss_pred CCCeEEEEEecCCCCCCccc--ccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCcccH-HHHHHHHHHH------
Confidence 35799999999987654322 1223345567889999999999999999987432 222111 0111111111
Q ss_pred cceeeechhhhcccccccccccCCCCCCCCCcEEEECCCCCCCCCCCcchhhhhhhcCCceEEecceeccCCCcceeEEE
Q 013207 89 VQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVY 168 (447)
Q Consensus 89 ~~~~~lsd~~~~f~~~~~~~n~~d~~~~~~ipV~~I~GNHD~~~~~~~~~~~d~L~~~g~v~~fg~~~l~~~~~~~i~~~ 168 (447)
+..+ ...++|++++.||||...... ....+.....-..++.. . ...
T Consensus 73 ----------------~~~~------~~~~~P~~~~~GNHD~~~~~~---~~~~~~~~~~~~~~~~~------~---~~~ 118 (302)
T d1utea_ 73 ----------------FSDP------SLRNVPWHVLAGNHDHLGNVS---AQIAYSKISKRWNFPSP------Y---YRL 118 (302)
T ss_dssp ----------------SCSG------GGTTCCEEECCCHHHHHSCHH---HHHHGGGTSTTEECCSS------S---EEE
T ss_pred ----------------hhhh------hhcCCceEEeecccccccccc---cccchhhccccccCCCc------c---cce
Confidence 0001 135899999999999754321 11111110000011110 0 000
Q ss_pred EEEEecCCeeEEEEecCCC------------Ch-HHHHhhhcChhHHhhccchhhhhccccCceeEEEeecccccCCCCC
Q 013207 169 PILIRKGSTAVALYGLGNI------------RD-ERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKN 235 (447)
Q Consensus 169 Pi~l~~g~~~vaiyGl~~~------------~~-~~l~~~~~~~~~v~~l~p~~~~~~~~~~~~~Ill~H~~~~~~~~~~ 235 (447)
......+...+.++.+... .. ......+.. ++.+|++...... .....|++.|++........
T Consensus 119 ~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~~~~~~~~~~~-~Q~~WL~~~L~~~---~~~~~iv~~h~~~~~~~~~~ 194 (302)
T d1utea_ 119 RFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALAR-TQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEHG 194 (302)
T ss_dssp EEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHHHH-HHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSSC
T ss_pred eecccCCCCcEEEEEccceeEeecccccccccccccccchhHH-HHHHHHHHHHHhh---ccCceEEEEeccccccCCCC
Confidence 1111122234444443210 00 000000111 4677887665432 34567888888875432211
Q ss_pred c---ccc---cc-cccCCcEEEeccccCcccCCcccCCCCceEeccCCcccc-----------------ccccCccCCce
Q 013207 236 A---INE---HF-LPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVAT-----------------SLIEGESKPKH 291 (447)
Q Consensus 236 ~---i~~---~~-~~~~~D~v~~GH~H~~~i~pq~~~~~~~~i~ypGS~~~~-----------------s~~e~E~~~Kg 291 (447)
. ... .+ ...++|+|++||.|..+.. ... .+...+.+|+.-.. ... ......|
T Consensus 195 ~~~~~~~~~~~ll~~~~v~~~~~GH~H~~~r~--~~~-~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g 270 (302)
T d1utea_ 195 PTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYL--QDE-NGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFG-AENSLGG 270 (302)
T ss_dssp CCHHHHHHTHHHHHHTTCSEEEECSSSSEEEE--ECT-TCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEEC-CTTSCCE
T ss_pred CchhhhhhhhHHHHhcCceEEEeCCCcceEEE--ecC-CccEEEEeCCCCCCCCCccccccCCCcccceeec-ccCCcce
Confidence 1 111 12 2357999999999974321 111 11122222221111 011 1123458
Q ss_pred EEEEEEeCCeeEEEEEECCCCCcEEEE
Q 013207 292 VLLLEIKENQYRPTKIPLTSVRPFEYT 318 (447)
Q Consensus 292 ~~lvei~~~~~~~~~i~L~~~Rpf~~~ 318 (447)
+++++|++++++++++... -+.+...
T Consensus 271 f~~~~v~~~~l~~~~~~~~-G~~~~~~ 296 (302)
T d1utea_ 271 FAYVEITPKEMSVTYIEAS-GKSLFKT 296 (302)
T ss_dssp EEEEEECSSCEEEEEEETT-SCEEEEE
T ss_pred EEEEEEECCEEEEEEEeCC-CCEEEEE
Confidence 9999999998889888774 4545333
No 14
>d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=98.95 E-value=8e-09 Score=99.91 Aligned_cols=78 Identities=19% Similarity=0.134 Sum_probs=48.6
Q ss_pred CCceEEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC-C--CHHHHHHHHHHHHHhhcCC
Q 013207 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENK-P--SRSTLVKAIEILRRHCLND 86 (447)
Q Consensus 10 ~~~mrILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~~~-p--s~~~l~~~~~~L~~l~~~~ 86 (447)
...+||++++|++... +..+++..+ .+...++|+||++||+..... . ........++.++.+
T Consensus 5 ~~p~~F~v~GD~g~~~---------~~~~~~~~~--~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~---- 69 (312)
T d2qfra2 5 DVPYTFGLIGDLGQSF---------DSNTTLSHY--ELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERS---- 69 (312)
T ss_dssp SCCEEEEEECSCCSBH---------HHHHHHHHH--HHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHH----
T ss_pred CCCEEEEEEeeCCCCC---------chHHHHHHH--HHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHH----
Confidence 4469999999987532 222332222 244678999999999963221 1 112223345555554
Q ss_pred CCcceeeechhhhcccccccccccCCCCCCCCCcEEEECCCCCCC
Q 013207 87 RPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (447)
Q Consensus 87 ~~~~~~~lsd~~~~f~~~~~~~n~~d~~~~~~ipV~~I~GNHD~~ 131 (447)
...+|+++++||||..
T Consensus 70 -----------------------------~~~~P~~~~~GNHD~~ 85 (312)
T d2qfra2 70 -----------------------------VAYQPWIWTAGNHEIE 85 (312)
T ss_dssp -----------------------------HTTSCEEECCCGGGTC
T ss_pred -----------------------------hhcceEEEeccccccc
Confidence 2368999999999963
No 15
>d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.88 E-value=1.3e-07 Score=92.28 Aligned_cols=56 Identities=16% Similarity=0.168 Sum_probs=33.1
Q ss_pred CCceEEEEEcCCCCCCCCCccc-ccccHH-HHHHHHHHHHHHcCCCEEEE-cCCCCCCC
Q 013207 10 ANTVRILVATDCHLGYMEKDEI-RRHDSF-EAFEEICSIAEQKEVDFVLL-GGDLFHEN 65 (447)
Q Consensus 10 ~~~mrILh~SD~HLG~~~~~~~-r~~d~~-~~feeil~~a~~~~vD~Vli-aGDLfd~~ 65 (447)
.-.++|||++|+|--....+.. -+-..+ ..++++.+.+++.+++.+++ +||+|...
T Consensus 6 t~~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs 64 (337)
T d1usha2 6 TYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGV 64 (337)
T ss_dssp EEEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSC
T ss_pred eeEEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccC
Confidence 3358999999999322211111 111122 23455666666778886666 99999753
No 16
>d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.17 E-value=9.5e-07 Score=78.79 Aligned_cols=78 Identities=18% Similarity=0.161 Sum_probs=46.5
Q ss_pred EEEEcCCCCCCCCCcccccccHHHHH-HHHHHHHHH--cCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcce
Q 013207 15 ILVATDCHLGYMEKDEIRRHDSFEAF-EEICSIAEQ--KEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQF 91 (447)
Q Consensus 15 ILh~SD~HLG~~~~~~~r~~d~~~~f-eeil~~a~~--~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~l~~~~~~~~~ 91 (447)
|..+||+|+|...--..|.-.....+ +.+++.-++ ..-|.|++.||++.......+ +.++|+++
T Consensus 4 i~fiSD~Hfgh~~i~~~r~f~~~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~~~~----~~~~l~~L--------- 70 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNE----YLRIWKAL--------- 70 (188)
T ss_dssp EEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTS----HHHHHHHS---------
T ss_pred EEEEeCcCCCCcchhhcCCCCCHHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCCHHH----HHHHHHHC---------
Confidence 34699999997541111111112223 334444333 356999999999875433332 34677764
Q ss_pred eeechhhhcccccccccccCCCCCCCCCcEEEECCCCCCC
Q 013207 92 QVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (447)
Q Consensus 92 ~~lsd~~~~f~~~~~~~n~~d~~~~~~ipV~~I~GNHD~~ 131 (447)
....++|.||||..
T Consensus 71 --------------------------~g~~~lI~GNHD~~ 84 (188)
T d1xm7a_ 71 --------------------------PGRKILVMGNHDKD 84 (188)
T ss_dssp --------------------------SSEEEEECCTTCCC
T ss_pred --------------------------CCceEEEecCCCch
Confidence 23688999999974
No 17
>d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=98.04 E-value=0.00012 Score=69.36 Aligned_cols=54 Identities=15% Similarity=0.169 Sum_probs=35.2
Q ss_pred ceEEEEEcCCCCCCCCC-----cccccccHHHHHHHHHHHHHHcCCC-EEEEcCCCCCCC
Q 013207 12 TVRILVATDCHLGYMEK-----DEIRRHDSFEAFEEICSIAEQKEVD-FVLLGGDLFHEN 65 (447)
Q Consensus 12 ~mrILh~SD~HLG~~~~-----~~~r~~d~~~~feeil~~a~~~~vD-~VliaGDLfd~~ 65 (447)
+++|||++|+|--.... +....--.+..+..+++.+++++++ ++|-+||+|..+
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs 61 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGT 61 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSS
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Confidence 47899999999322111 1111111356678888888887765 467799999864
No 18
>d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]}
Probab=97.95 E-value=3.1e-06 Score=81.61 Aligned_cols=55 Identities=25% Similarity=0.354 Sum_probs=32.8
Q ss_pred CceEEEEEcCCCCCCCCCccc--cccc--HHHHH-HHHHHHHHHcCCCEEE-EcCCCCCCC
Q 013207 11 NTVRILVATDCHLGYMEKDEI--RRHD--SFEAF-EEICSIAEQKEVDFVL-LGGDLFHEN 65 (447)
Q Consensus 11 ~~mrILh~SD~HLG~~~~~~~--r~~d--~~~~f-eeil~~a~~~~vD~Vl-iaGDLfd~~ 65 (447)
..++|||++|+|--...+... ...+ .+..| ..+-+.+++.+++.++ -+||+|+.+
T Consensus 10 ~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt 70 (322)
T d3c9fa2 10 NDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGN 70 (322)
T ss_dssp CSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSC
T ss_pred CEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCC
Confidence 469999999999422211111 1111 13333 3344556778888655 599999965
No 19
>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]}
Probab=97.66 E-value=1.1e-05 Score=72.62 Aligned_cols=45 Identities=18% Similarity=0.206 Sum_probs=37.0
Q ss_pred EEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHH-cCCCEEEEcCCCCCCCCCCHH
Q 013207 14 RILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQ-KEVDFVLLGGDLFHENKPSRS 70 (447)
Q Consensus 14 rILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~-~~vD~VliaGDLfd~~~ps~~ 70 (447)
||+++||+|-. +.+|.++++.+.. ...|.+++.||++|...-|.+
T Consensus 14 rI~vIgDIHG~------------~~~L~~lL~~i~~~~~~d~lv~lGD~vDrGp~s~~ 59 (219)
T d1g5ba_ 14 NIWVVGDLHGC------------YTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVE 59 (219)
T ss_dssp CEEEECCCTTC------------HHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHHH
T ss_pred eEEEEEecccC------------HHHHHHHHHHcCCCCCCCEEEEeCCccccCccHHH
Confidence 89999999943 6789999998874 567999999999998854443
No 20
>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]}
Probab=93.45 E-value=0.066 Score=49.75 Aligned_cols=50 Identities=16% Similarity=0.132 Sum_probs=35.5
Q ss_pred EEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHH
Q 013207 14 RILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKA 75 (447)
Q Consensus 14 rILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~ 75 (447)
.+.++.|+|-- +..|-.+++...--...-.|+.||..|+..-|.+++...
T Consensus 53 pv~VvGDiHG~------------~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~slE~i~lL 102 (294)
T d1jk7a_ 53 PLKICGDIHGQ------------YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLL 102 (294)
T ss_dssp SEEEECBCTTC------------HHHHHHHHHHHCCTTSSCEEECSCCSSSSSCHHHHHHHH
T ss_pred CeEEEEECCCC------------hHhHHHHHhhcCCCccceEEeeccccCCCccchHHHHHH
Confidence 37899999953 455666776654433445788999999998887765433
No 21
>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.24 E-value=0.091 Score=48.61 Aligned_cols=50 Identities=22% Similarity=0.205 Sum_probs=35.5
Q ss_pred EEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHH
Q 013207 14 RILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKA 75 (447)
Q Consensus 14 rILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~ 75 (447)
.+.++.|+|-- +..+-.+++....-.-.-.|+.||..|+..-|.+++...
T Consensus 46 pv~VvGDlHG~------------~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~slEvl~lL 95 (288)
T d3c5wc1 46 PVTVCGDVHGQ------------FHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLL 95 (288)
T ss_dssp SEEEECBCTTC------------HHHHHHHHHHHCCTTTSCEEECSCCCCSSSSHHHHHHHH
T ss_pred CeEEEeeCCCC------------HHHHHHHHHhcCCCccceEEecCcccCCCCcceeHHHHH
Confidence 47899999954 455666776654333345899999999998887765433
No 22
>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.17 E-value=0.17 Score=47.44 Aligned_cols=48 Identities=21% Similarity=0.293 Sum_probs=31.9
Q ss_pred EEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHc-CCCEEEEcCCCCCCCCCCHHHHH
Q 013207 14 RILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK-EVDFVLLGGDLFHENKPSRSTLV 73 (447)
Q Consensus 14 rILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~-~vD~VliaGDLfd~~~ps~~~l~ 73 (447)
.+.++.|+|-- +..+-++++....- .-.-.|+.||..|+..-|.+++.
T Consensus 61 pv~VvGDiHGq------------~~DL~~if~~~g~p~~~~~ylFLGDYVDRG~~slEvi~ 109 (324)
T d1s95a_ 61 KITVCGDTHGQ------------FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVIL 109 (324)
T ss_dssp EEEEECCCTTC------------HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHH
T ss_pred CEEEEEECCCC------------HHHHHHHHHHCCCCCCCCeEEEecccccCcCcceeehH
Confidence 67899999953 44455555543211 12247899999999987777654
No 23
>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.90 E-value=0.16 Score=49.96 Aligned_cols=48 Identities=17% Similarity=0.142 Sum_probs=33.4
Q ss_pred EEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHH
Q 013207 15 ILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVK 74 (447)
Q Consensus 15 ILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~ 74 (447)
+.++.|+|-- +..|-+|++....-.-.-.|+.||..|+..-|.+++..
T Consensus 72 v~VvGDIHGq------------~~DLl~If~~~G~P~~~~yLFLGDYVDRG~~SlEvlll 119 (473)
T d1auia_ 72 VTVCGDIHGQ------------FFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLY 119 (473)
T ss_dssp EEEECCCTTC------------HHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHHHHHH
T ss_pred EEEEEeCCCC------------HHHHHHHHHHcCCCCcceEEecCccccCCcccHHHHHH
Confidence 7889999953 44556666665432233468889999999888776543
No 24
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]}
Probab=69.23 E-value=5.8 Score=30.47 Aligned_cols=20 Identities=25% Similarity=0.353 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHcCCCEEEEc
Q 013207 39 AFEEICSIAEQKEVDFVLLG 58 (447)
Q Consensus 39 ~feeil~~a~~~~vD~Vlia 58 (447)
..+.|++.|++.++|+|+++
T Consensus 90 ~~~~I~~~a~~~~~dliV~G 109 (140)
T d1jmva_ 90 LGQVLSDAIEQYDVDLLVTG 109 (140)
T ss_dssp HHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHhhhhchhhEEEec
Confidence 45889999999999999885
No 25
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=59.09 E-value=10 Score=29.83 Aligned_cols=18 Identities=50% Similarity=0.870 Sum_probs=13.9
Q ss_pred HHHHHHHHHcCCCEEEEc
Q 013207 41 EEICSIAEQKEVDFVLLG 58 (447)
Q Consensus 41 eeil~~a~~~~vD~Vlia 58 (447)
+.|++.|++.++|+|+++
T Consensus 108 ~~I~~~a~~~~~dliV~G 125 (160)
T d1mjha_ 108 EEIVKIAEDEGVDIIIMG 125 (160)
T ss_dssp HHHHHHHHHTTCSEEEEE
T ss_pred HHHhhhhhccccceEEec
Confidence 457777888888888875
No 26
>d1gg4a1 c.59.1.1 (A:313-447) UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli [TaxId: 562]}
Probab=47.95 E-value=14 Score=28.80 Aligned_cols=42 Identities=24% Similarity=0.181 Sum_probs=30.2
Q ss_pred eEEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCC
Q 013207 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLF 62 (447)
Q Consensus 13 mrILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLf 62 (447)
=||++++|.- ..++.+...-+++.+.+.+.++|.|++.|+.+
T Consensus 41 ~ki~vLGdM~--------ELG~~s~~~H~~l~~~~~~~~id~v~~vG~~~ 82 (135)
T d1gg4a1 41 YRVLVVGDMA--------ELGAESEACHVQVGEAAKAAGIDRVLSVGKQS 82 (135)
T ss_dssp EEEEEECCCC--------CCTTHHHHHHHHHHHHHHHHTCSEEEEESSST
T ss_pred CceEEEcccc--------cchhhHHHHHHHHHHHHHhhcCCeEeeechHH
Confidence 4777777764 23455666677888888888888888888754
No 27
>d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=44.14 E-value=25 Score=31.30 Aligned_cols=51 Identities=12% Similarity=0.216 Sum_probs=35.0
Q ss_pred CCceEEEEEcCCCCCCCCCcccccccHHHHHHHHHH-HHHHcCCCEEEEcCCCCCCC-CCCHH
Q 013207 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICS-IAEQKEVDFVLLGGDLFHEN-KPSRS 70 (447)
Q Consensus 10 ~~~mrILh~SD~HLG~~~~~~~r~~d~~~~feeil~-~a~~~~vD~VliaGDLfd~~-~ps~~ 70 (447)
.++||||.+.|+= | ..-..++++.|. +-+++++|||+.-|---... -.+.+
T Consensus 2 ~~~MkILfiGDIv-G---------~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~Git~k 54 (281)
T d1t71a_ 2 MNSIKFIFLGDVY-G---------KAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLK 54 (281)
T ss_dssp CCCCEEEEECEEB-H---------HHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHH
T ss_pred CccceEEEEEccC-C---------HHHHHHHHHHhHHHHHHhCCCEEEECCccCCCCcCCCHH
Confidence 4689999999983 3 233556666544 45678999999999865544 34444
No 28
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]}
Probab=42.14 E-value=29 Score=25.95 Aligned_cols=19 Identities=26% Similarity=0.515 Sum_probs=14.4
Q ss_pred HHHHHHHHHHcCCCEEEEc
Q 013207 40 FEEICSIAEQKEVDFVLLG 58 (447)
Q Consensus 40 feeil~~a~~~~vD~Vlia 58 (447)
.+.|++.|.+.++|+|+++
T Consensus 87 ~~~I~~~a~~~~~dliV~G 105 (135)
T d2z3va1 87 AEAILQAARAEKADLIVMG 105 (135)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHhhhhheeeEEec
Confidence 4677888888888887765
No 29
>d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]}
Probab=40.17 E-value=52 Score=28.65 Aligned_cols=47 Identities=17% Similarity=0.246 Sum_probs=34.0
Q ss_pred eEEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC-CCHH
Q 013207 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENK-PSRS 70 (447)
Q Consensus 13 mrILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~~~-ps~~ 70 (447)
||||++.|+= | ..-.+++++.|...++ +.|||+.-|.--.... .+.+
T Consensus 1 MkILfiGDIv-G---------~~Gr~~v~~~Lp~lk~-~~DfVIaNgENaa~G~Git~~ 48 (255)
T d1t70a_ 1 MRVLFIGDVF-G---------QPGRRVLQNHLPTIRP-QFDFVIVNMENSAGGFGMHRD 48 (255)
T ss_dssp CEEEEECCBB-H---------HHHHHHHHHHHHHHGG-GCSEEEEECTBTTTTSSCCHH
T ss_pred CeEEEEecCC-C---------HHHHHHHHHHhHHHHh-hCCEEEECCccCCCCcCCCHH
Confidence 8999999983 3 3346778888888765 5899999998655443 3443
No 30
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=38.74 E-value=39 Score=25.05 Aligned_cols=19 Identities=21% Similarity=0.225 Sum_probs=15.0
Q ss_pred HHHHHHHHHHcCCCEEEEc
Q 013207 40 FEEICSIAEQKEVDFVLLG 58 (447)
Q Consensus 40 feeil~~a~~~~vD~Vlia 58 (447)
-++.++.+.+..+|+|++-
T Consensus 33 ~~eal~~~~~~~~dlillD 51 (117)
T d2a9pa1 33 GREALEQFEAEQPDIIILD 51 (117)
T ss_dssp HHHHHHHHHHHCCSEEEEC
T ss_pred HHHHHHHHHhcCCCEEEec
Confidence 3667778888999998864
No 31
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=38.47 E-value=28 Score=26.84 Aligned_cols=18 Identities=22% Similarity=0.226 Sum_probs=14.9
Q ss_pred HHHHHHHHHHcCCCEEEE
Q 013207 40 FEEICSIAEQKEVDFVLL 57 (447)
Q Consensus 40 feeil~~a~~~~vD~Vli 57 (447)
-++.++.+.++++|+|++
T Consensus 34 ~~eal~~~~~~~~dlil~ 51 (139)
T d1w25a1 34 GPTALAMAARDLPDIILL 51 (139)
T ss_dssp HHHHHHHHHHHCCSEEEE
T ss_pred chhhhhhhhcccceeeee
Confidence 367778888899999888
No 32
>d2vvpa1 c.121.1.1 (A:3-158) Alternate ribose 5-phosphate isomerase B, RpiB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=37.66 E-value=43 Score=26.92 Aligned_cols=40 Identities=20% Similarity=0.276 Sum_probs=28.0
Q ss_pred ceEEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCC
Q 013207 12 TVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHE 64 (447)
Q Consensus 12 ~mrILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~ 64 (447)
.|||.+.|| |.|+.. =+++++..++.+.+++=++-+=.+.
T Consensus 1 ~MKI~igsD-h~G~~L------------K~~l~~~L~~~g~~viD~G~~~~~~ 40 (156)
T d2vvpa1 1 GMRVYLGAD-HAGYEL------------KQRIIEHLKQTGHEPIDCGALRYDA 40 (156)
T ss_dssp CCEEEEEEC-HHHHHH------------HHHHHHHHHHTTCEEEECSCCSCCT
T ss_pred CCEEEEEeC-CcHHHH------------HHHHHHHHHHCCCEEEecCCCcccC
Confidence 499999999 988532 3567788888888876444333443
No 33
>d2vgna3 d.79.3.2 (A:278-381) Dom34 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=37.27 E-value=24 Score=26.43 Aligned_cols=59 Identities=14% Similarity=0.213 Sum_probs=40.6
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcceeeechhhhcccccccccccCCCCCCCCC
Q 013207 40 FEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGL 119 (447)
Q Consensus 40 feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~l~~~~~~~~~~~lsd~~~~f~~~~~~~n~~d~~~~~~i 119 (447)
.+++.+.+...-|+.+|++-+++....+.. -.+..+++.... +.+.
T Consensus 25 ~~~v~~A~e~gAv~~LlIsd~l~r~~~~~~--r~~~~~l~~~~~--------------------------------~~g~ 70 (104)
T d2vgna3 25 EKEVVKAAEYGAISYLLLTDKVLHSDNIAQ--REEYLKLMDSVE--------------------------------SNGG 70 (104)
T ss_dssp HHHHHHHHHTTCEEEEEEETTGGGSSCHHH--HHHHHHHHHHHH--------------------------------HTTC
T ss_pred HHHHHHHHHhCCceEEEEecccccccccch--HHHHHHHHHHHH--------------------------------hcCC
Confidence 467777777788999999999997654322 223344444321 3478
Q ss_pred cEEEECCCCCCCC
Q 013207 120 PVFSIHGNHDDPA 132 (447)
Q Consensus 120 pV~~I~GNHD~~~ 132 (447)
.|++|+.+|+...
T Consensus 71 ~v~iiS~~~~~G~ 83 (104)
T d2vgna3 71 KALVLSTLHSLGE 83 (104)
T ss_dssp EEEEECTTSHHHH
T ss_pred EEEEEcCCChhHH
Confidence 8999999997743
No 34
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=35.71 E-value=40 Score=25.10 Aligned_cols=55 Identities=18% Similarity=0.162 Sum_probs=30.7
Q ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcceeeechhhhcccccccccccCCCCCCCCCc
Q 013207 41 EEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLP 120 (447)
Q Consensus 41 eeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~l~~~~~~~~~~~lsd~~~~f~~~~~~~n~~d~~~~~~ip 120 (447)
++.++.+.+.++|+|++--.+=+.+ .+ .+++.|++.. ....+|
T Consensus 35 ~~al~~~~~~~~dlil~D~~mp~~d-----G~-el~~~ir~~~-------------------------------~~~~iP 77 (123)
T d1mb3a_ 35 LSALSIARENKPDLILMDIQLPEIS-----GL-EVTKWLKEDD-------------------------------DLAHIP 77 (123)
T ss_dssp HHHHHHHHHHCCSEEEEESBCSSSB-----HH-HHHHHHHHST-------------------------------TTTTSC
T ss_pred HHHHHHHHhCCCCEEEEEeccCCCc-----HH-HHHHHHHhCC-------------------------------CcCCCC
Confidence 5666777888999998866654432 21 2344455420 024789
Q ss_pred EEEECCCCCCCC
Q 013207 121 VFSIHGNHDDPA 132 (447)
Q Consensus 121 V~~I~GNHD~~~ 132 (447)
|+++.|+.+...
T Consensus 78 ii~lt~~~~~~~ 89 (123)
T d1mb3a_ 78 VVAVTAFAMKGD 89 (123)
T ss_dssp EEEEC------C
T ss_pred eEEEEEecCHHH
Confidence 999999877654
No 35
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=33.70 E-value=85 Score=23.18 Aligned_cols=56 Identities=16% Similarity=0.151 Sum_probs=36.6
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcceeeechhhhcccccccccccCCCCCCCCC
Q 013207 40 FEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGL 119 (447)
Q Consensus 40 feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~l~~~~~~~~~~~lsd~~~~f~~~~~~~n~~d~~~~~~i 119 (447)
-++.++.+.+.++|+||+-=.+=+ ...+ .+++.+++. ...+
T Consensus 34 ~~eal~~~~~~~~dlvl~D~~mP~-----~~G~-el~~~ir~~---------------------------------~~~~ 74 (121)
T d1ys7a2 34 GAEALRSATENRPDAIVLDINMPV-----LDGV-SVVTALRAM---------------------------------DNDV 74 (121)
T ss_dssp HHHHHHHHHHSCCSEEEEESSCSS-----SCHH-HHHHHHHHT---------------------------------TCCC
T ss_pred HHHHHHHHHhCCCCEEEEEeeccC-----cccH-HHHHHHHhc---------------------------------CCCC
Confidence 467778888999999988554433 3322 133444442 2468
Q ss_pred cEEEECCCCCCCCCC
Q 013207 120 PVFSIHGNHDDPAGV 134 (447)
Q Consensus 120 pV~~I~GNHD~~~~~ 134 (447)
||+++.|..|.....
T Consensus 75 piI~lt~~~~~~~~~ 89 (121)
T d1ys7a2 75 PVCVLSARSSVDDRV 89 (121)
T ss_dssp CEEEEECCCTTTCCC
T ss_pred EEEEEEeeCCHHHHH
Confidence 999999987776544
No 36
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=33.67 E-value=41 Score=25.16 Aligned_cols=19 Identities=16% Similarity=0.378 Sum_probs=15.0
Q ss_pred HHHHHHHHHHcCCCEEEEc
Q 013207 40 FEEICSIAEQKEVDFVLLG 58 (447)
Q Consensus 40 feeil~~a~~~~vD~Vlia 58 (447)
-++.++.+.+.++|+|++-
T Consensus 35 ~~~al~~l~~~~~dlii~D 53 (121)
T d1xhfa1 35 GAEMHQILSEYDINLVIMD 53 (121)
T ss_dssp HHHHHHHHHHSCCSEEEEC
T ss_pred hHHHHHHHHhcCCCEEEee
Confidence 3666777788999999984
No 37
>d1uz5a3 c.57.1.2 (A:181-328) MoeA, central domain {Archaeon Pyrococcus horikoshii, PH0582 [TaxId: 53953]}
Probab=31.68 E-value=29 Score=27.38 Aligned_cols=26 Identities=23% Similarity=0.316 Sum_probs=19.5
Q ss_pred cHHHHHHHHHHHHHHcCCCEEEEcCCC
Q 013207 35 DSFEAFEEICSIAEQKEVDFVLLGGDL 61 (447)
Q Consensus 35 d~~~~feeil~~a~~~~vD~VliaGDL 61 (447)
|....+.+.++.+.++ +|+|+.+|=.
T Consensus 51 Dd~~~i~~~i~~~~~~-~DliIttGG~ 76 (148)
T d1uz5a3 51 DDKESLKALIEKAVNV-GDVVVISGGA 76 (148)
T ss_dssp SSHHHHHHHHHHHHHH-CSEEEEECCC
T ss_pred cHHHHHHHHHHhhhcc-ccEEEECCCc
Confidence 4456777777777654 8999999955
No 38
>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=31.38 E-value=39 Score=26.96 Aligned_cols=40 Identities=23% Similarity=0.296 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHh
Q 013207 39 AFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRH 82 (447)
Q Consensus 39 ~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~l 82 (447)
..+++++.|+++++|+|.++.=+.. +...+.++++.|++.
T Consensus 45 p~e~~~~~~~~~~~d~i~lS~l~~~----~~~~~~~~~~~l~~~ 84 (156)
T d3bula2 45 PAEKILRTAKEVNADLIGLSGLITP----SLDEMVNVAKEMERQ 84 (156)
T ss_dssp CHHHHHHHHHHHTCSEEEEECCSTH----HHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhhCCCEEEEeccccc----chHHHHHHHHHHHhc
Confidence 3589999999999999999986554 455667778888863
No 39
>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}
Probab=30.86 E-value=34 Score=31.19 Aligned_cols=25 Identities=20% Similarity=0.401 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHcCCCEEEEcCCCCC
Q 013207 39 AFEEICSIAEQKEVDFVLLGGDLFH 63 (447)
Q Consensus 39 ~feeil~~a~~~~vD~VliaGDLfd 63 (447)
.+.++-++..+.+||+|++.||-|.
T Consensus 76 ~~~~~~~~l~~~kPD~vlv~GDr~e 100 (373)
T d1v4va_ 76 ILPQAARALKEMGADYVLVHGDTLT 100 (373)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCHH
T ss_pred HHHHHhhhhhhcCcccccccccCcc
Confidence 4556666678899999999998654
No 40
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=30.45 E-value=37 Score=26.01 Aligned_cols=54 Identities=20% Similarity=0.263 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcceeeechhhhcccccccccccCCCCCCCC
Q 013207 39 AFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVG 118 (447)
Q Consensus 39 ~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~l~~~~~~~~~~~lsd~~~~f~~~~~~~n~~d~~~~~~ 118 (447)
+.++.++.+.+..+|+|++- + .-|....+ .+++.+++. ...
T Consensus 32 ~~~eAl~~l~~~~~dlvilD--~---~mp~~~G~-e~~~~lr~~---------------------------------~~~ 72 (137)
T d1ny5a1 32 RGKEAYKLLSEKHFNVVLLD--L---LLPDVNGL-EILKWIKER---------------------------------SPE 72 (137)
T ss_dssp SHHHHHHHHHHSCCSEEEEE--S---BCSSSBHH-HHHHHHHHH---------------------------------CTT
T ss_pred CHHHHHHHhhccccccchHH--H---hhhhhhHH-HHHHHHHHh---------------------------------CCC
Confidence 34777888888999999883 2 23444432 234445542 347
Q ss_pred CcEEEECCCCCCC
Q 013207 119 LPVFSIHGNHDDP 131 (447)
Q Consensus 119 ipV~~I~GNHD~~ 131 (447)
+||+++.|..|..
T Consensus 73 ~piI~lT~~~~~~ 85 (137)
T d1ny5a1 73 TEVIVITGHGTIK 85 (137)
T ss_dssp SEEEEEEETTCHH
T ss_pred CCEEEEECCCCHH
Confidence 8999999976553
No 41
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=30.34 E-value=43 Score=24.87 Aligned_cols=19 Identities=16% Similarity=0.086 Sum_probs=15.0
Q ss_pred HHHHHHHHHHcCCCEEEEc
Q 013207 40 FEEICSIAEQKEVDFVLLG 58 (447)
Q Consensus 40 feeil~~a~~~~vD~Vlia 58 (447)
-++.++.+.+.++|+|++-
T Consensus 35 ~~~al~~~~~~~~dliilD 53 (118)
T d1u0sy_ 35 GREAVEKYKELKPDIVTMD 53 (118)
T ss_dssp HHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHhccCCEEEEe
Confidence 4667777788999999983
No 42
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=29.64 E-value=47 Score=24.65 Aligned_cols=22 Identities=23% Similarity=0.232 Sum_probs=16.0
Q ss_pred HHHHHHHHHHcCCCEEEEcCCC
Q 013207 40 FEEICSIAEQKEVDFVLLGGDL 61 (447)
Q Consensus 40 feeil~~a~~~~vD~VliaGDL 61 (447)
-++.++.+.++++|+|++--.+
T Consensus 34 g~eal~~~~~~~~dlillD~~m 55 (119)
T d1peya_ 34 GLQALDIVTKERPDLVLLDMKI 55 (119)
T ss_dssp HHHHHHHHHHHCCSEEEEESCC
T ss_pred HHHHHHHHHhCCCCEEEEeccC
Confidence 3566777888999999984333
No 43
>d1i60a_ c.1.15.4 (A:) Hypothetical protein IolI {Bacillus subtilis [TaxId: 1423]}
Probab=29.17 E-value=46 Score=28.23 Aligned_cols=71 Identities=10% Similarity=0.170 Sum_probs=44.7
Q ss_pred ceEEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHhh
Q 013207 12 TVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHC 83 (447)
Q Consensus 12 ~mrILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~l~ 83 (447)
.+++..+. ...+....+....++..+.++.+++.|...++..|++..-..+...+..+....+++.|+++|
T Consensus 59 gl~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 129 (278)
T d1i60a_ 59 HIKPLALN-ALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELS 129 (278)
T ss_dssp SCEEEEEE-EEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEe-cCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccCCCCCCHHHHHHHHHHHHHHHH
Confidence 46665432 222222233334456677889999999999999987765444555455555666777777764
No 44
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=27.50 E-value=33 Score=27.02 Aligned_cols=14 Identities=36% Similarity=0.617 Sum_probs=10.1
Q ss_pred CCCcEEEECCCCCC
Q 013207 117 VGLPVFSIHGNHDD 130 (447)
Q Consensus 117 ~~ipV~~I~GNHD~ 130 (447)
..+||++|+-....
T Consensus 150 ~~cpVlvV~~~~~~ 163 (171)
T d2gm3a1 150 AECPVMTIKRNADE 163 (171)
T ss_dssp CSSCEEEEECCGGG
T ss_pred CCCCEEEEeCCCCC
Confidence 57999999755433
No 45
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=27.16 E-value=22 Score=27.59 Aligned_cols=53 Identities=19% Similarity=0.224 Sum_probs=34.0
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcceeeechhhhcccccccccccCCCCCCCCC
Q 013207 40 FEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGL 119 (447)
Q Consensus 40 feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~l~~~~~~~~~~~lsd~~~~f~~~~~~~n~~d~~~~~~i 119 (447)
-++.++.+.++.+|+|++ |+. -|...-+. +++.+++. ...+
T Consensus 33 ~~~al~~l~~~~~dlil~--D~~---mP~~~G~e-l~~~lr~~---------------------------------~~~~ 73 (140)
T d1qkka_ 33 ATEALAGLSADFAGIVIS--DIR---MPGMDGLA-LFRKILAL---------------------------------DPDL 73 (140)
T ss_dssp HHHHHHTCCTTCCSEEEE--ESC---CSSSCHHH-HHHHHHHH---------------------------------CTTS
T ss_pred hHHHHHHHhccCcchHHH--hhc---cCCCCHHH-HHHHHHHh---------------------------------CCCC
Confidence 356777778899998877 443 34333321 34444542 3479
Q ss_pred cEEEECCCCCCC
Q 013207 120 PVFSIHGNHDDP 131 (447)
Q Consensus 120 pV~~I~GNHD~~ 131 (447)
||+++.|..|..
T Consensus 74 pvI~lT~~~~~~ 85 (140)
T d1qkka_ 74 PMILVTGHGDIP 85 (140)
T ss_dssp CEEEEECGGGHH
T ss_pred cEEEEECCCCHH
Confidence 999999987664
No 46
>d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]}
Probab=26.50 E-value=91 Score=23.22 Aligned_cols=51 Identities=14% Similarity=0.109 Sum_probs=29.0
Q ss_pred CCceEEEEEcCCCCCCCC-------CcccccccHHHHHHHHHHHHHHcCCCEEEEcCCC
Q 013207 10 ANTVRILVATDCHLGYME-------KDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDL 61 (447)
Q Consensus 10 ~~~mrILh~SD~HLG~~~-------~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDL 61 (447)
.+.||||++=|...-... .+. ..-.....-++.++.+.+..+|+|++--.+
T Consensus 4 ~~~~kILiVDD~~~~~~~l~~~L~~~g~-~~v~~a~~~~~al~~l~~~~~dlii~D~~m 61 (129)
T d1p6qa_ 4 AEKIKVLIVDDQVTSRLLLGDALQQLGF-KQITAAGDGEQGMKIMAQNPHHLVISDFNM 61 (129)
T ss_dssp SSCCCEEEECSSHHHHHHHHHHHHTTTC-SCEECCSSHHHHHHHHHTSCCSEEEECSSS
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhCCCCeEEeeeec
Confidence 456899988876442110 010 000111234667788888999999884443
No 47
>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}
Probab=26.41 E-value=40 Score=30.69 Aligned_cols=25 Identities=24% Similarity=0.316 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHcCCCEEEEcCCCCC
Q 013207 39 AFEEICSIAEQKEVDFVLLGGDLFH 63 (447)
Q Consensus 39 ~feeil~~a~~~~vD~VliaGDLfd 63 (447)
+..++-+...+.+||+|++.||-+.
T Consensus 76 ~i~~~~~~~~~~kpD~v~v~GDr~e 100 (377)
T d1o6ca_ 76 ALVRLDELFKDIKPDIVLVHGDTTT 100 (377)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTCHH
T ss_pred HHHhhhhhhhhcccceeEeeecccc
Confidence 4456666778899999999999765
No 48
>d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]}
Probab=25.91 E-value=1.9e+02 Score=24.72 Aligned_cols=47 Identities=19% Similarity=0.226 Sum_probs=33.7
Q ss_pred eEEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC-CCHH
Q 013207 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENK-PSRS 70 (447)
Q Consensus 13 mrILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~~~-ps~~ 70 (447)
||||++.|+= | ..-.+++++.|...++ +.|||+.-|.=..... .+.+
T Consensus 1 MkiLfiGDIv-G---------~~Gr~~v~~~Lp~Lk~-~~DfVIaNgENaa~G~Git~k 48 (252)
T d2z06a1 1 MRVLFIGDVM-A---------EPGLRAVGLHLPDIRD-RYDLVIANGENAARGKGLDRR 48 (252)
T ss_dssp CEEEEECCBC-H---------HHHHHHHHHHHHHHGG-GCSEEEEECTTTTTTSSCCHH
T ss_pred CeEEEEeccC-C---------HHHHHHHHHHhHHHHh-hCCEEEEeeeccCCCcCCCHH
Confidence 8999999984 3 3346777888877765 5899999888665443 3443
No 49
>d1jbea_ c.23.1.1 (A:) CheY protein {Escherichia coli [TaxId: 562]}
Probab=25.56 E-value=75 Score=23.67 Aligned_cols=51 Identities=12% Similarity=-0.009 Sum_probs=29.0
Q ss_pred ceEEEEEcCCCCCCCC-------CcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q 013207 12 TVRILVATDCHLGYME-------KDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFH 63 (447)
Q Consensus 12 ~mrILh~SD~HLG~~~-------~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd 63 (447)
.||||++=|...-... .+.. .-+....-.+.++.+.+.++|+|++--.+=+
T Consensus 4 ~lriLvVDD~~~~r~~i~~~L~~~g~~-~v~~a~~g~~a~~~~~~~~~dlii~D~~mP~ 61 (128)
T d1jbea_ 4 ELKFLVVDDFSTMRRIVRNLLKELGFN-NVEEAEDGVDALNKLQAGGYGFVISDWNMPN 61 (128)
T ss_dssp TCCEEEECSCHHHHHHHHHHHHHTTCC-CEEEESSHHHHHHHHTTCCCCEEEEESCCSS
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHCCCc-EEEEecCchHHHHHHhcCCCCEEEEeccccc
Confidence 4788888776543221 1100 0011122356677888999999998555533
No 50
>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.75 E-value=93 Score=22.69 Aligned_cols=22 Identities=27% Similarity=0.383 Sum_probs=16.7
Q ss_pred HHHHHHHHHHcCCCEEEEcCCC
Q 013207 40 FEEICSIAEQKEVDFVLLGGDL 61 (447)
Q Consensus 40 feeil~~a~~~~vD~VliaGDL 61 (447)
.++.++.+.++++|+|++-=.+
T Consensus 34 ~~~a~~~~~~~~~dliilD~~m 55 (120)
T d1zgza1 34 GAGLREIMQNQSVDLILLDINL 55 (120)
T ss_dssp HHHHHHHHHHSCCSEEEEESCC
T ss_pred HHHHHHHHHhcCCCEEeeehhh
Confidence 4677788889999999993333
No 51
>d2nqra3 c.57.1.2 (A:178-326) MoeA, central domain {Escherichia coli [TaxId: 562]}
Probab=24.72 E-value=46 Score=26.24 Aligned_cols=30 Identities=20% Similarity=0.232 Sum_probs=21.1
Q ss_pred cHHHHHHHHHHHHHHcCCCEEEEcCCCCCCC
Q 013207 35 DSFEAFEEICSIAEQKEVDFVLLGGDLFHEN 65 (447)
Q Consensus 35 d~~~~feeil~~a~~~~vD~VliaGDLfd~~ 65 (447)
|..+.+.+.++.+.+ ++|+|+.+|=.--..
T Consensus 51 Dd~~~i~~~l~~~~~-~~DivittGG~s~g~ 80 (149)
T d2nqra3 51 DDPHALRAAFIEADS-QADVVISSGGVSVGE 80 (149)
T ss_dssp SSHHHHHHHHHHHHH-HCSEEEECSSSCSSS
T ss_pred ChHHHHHHHHHhccc-ccCEEEEcCCccCCc
Confidence 445667777776665 489999999874433
No 52
>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.69 E-value=82 Score=23.67 Aligned_cols=56 Identities=13% Similarity=0.098 Sum_probs=33.4
Q ss_pred CCCceEEEEEcCCCCCCCCCccc-----ccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCC
Q 013207 9 IANTVRILVATDCHLGYMEKDEI-----RRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHE 64 (447)
Q Consensus 9 ~~~~mrILh~SD~HLG~~~~~~~-----r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~ 64 (447)
+.+.||||++=|...-...-... ..-.....-++.++.+.++.+|+||+--.+=+.
T Consensus 5 ~~~~~~ILiVDD~~~~~~~l~~~L~~~g~~v~~a~~g~ea~~~~~~~~~dlillD~~mP~~ 65 (133)
T d2ayxa1 5 DNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNM 65 (133)
T ss_dssp CCCCCEEEEEESSHHHHHHHHHHHHHHTSEEEEECCSHHHHHHHHHSCCSEEEEEESSCSS
T ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHcCCEEEEECcHHHHHHHHhccCceEEEEeccCCCC
Confidence 45678999999976542210000 000011123566778889999999997777553
No 53
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=24.45 E-value=63 Score=23.87 Aligned_cols=24 Identities=17% Similarity=0.149 Sum_probs=17.7
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCC
Q 013207 40 FEEICSIAEQKEVDFVLLGGDLFH 63 (447)
Q Consensus 40 feeil~~a~~~~vD~VliaGDLfd 63 (447)
.++.++.+.+..+|+|++-=.+-+
T Consensus 33 ~~~al~~l~~~~~dlil~D~~mp~ 56 (121)
T d1zesa1 33 YDSAVNQLNEPWPDLILLDWMLPG 56 (121)
T ss_dssp HHHHHHHSSSSCCSEEEECSSCTT
T ss_pred hHHHHHHHHccCCCEEEeecCCCC
Confidence 467777888899999988555543
No 54
>d1u6ka1 c.127.1.1 (A:2-283) F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=23.73 E-value=2.1e+02 Score=24.41 Aligned_cols=87 Identities=26% Similarity=0.276 Sum_probs=52.7
Q ss_pred CCceEEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCc
Q 013207 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPV 89 (447)
Q Consensus 10 ~~~mrILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~l~~~~~~~ 89 (447)
++..-.++.|-.-++. ++.-++-+..+..+++.++||+++.|= +|...-=..+-+.|.
T Consensus 30 edi~vrv~gsGaKM~p--------e~~e~~~~~~~~~~~~~~pDf~i~isP-----N~a~PGP~~ARE~l~--------- 87 (282)
T d1u6ka1 30 EDVEFRVVGTSVKMDP--------ECVEAAVEMALDIAEDFEPDFIVYGGP-----NPAAPGPSKAREMLA--------- 87 (282)
T ss_dssp SSEEEEEEECTTCCSH--------HHHHHHHHHHHHHHHHHCCSEEEEECS-----CTTSHHHHHHHHHHH---------
T ss_pred cCceEEEeccccCcCH--------HHHHHHHHHHHHHHHhcCCCEEEEECC-----CCCCCCcHHHHHHHH---------
Confidence 3444455566555542 122344566777788999999998863 333222233556665
Q ss_pred ceeeechhhhcccccccccccCCCCCCCCCcEEEECCCCCCCCCCCcchhhhhhhcCCceEE
Q 013207 90 QFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNY 151 (447)
Q Consensus 90 ~~~~lsd~~~~f~~~~~~~n~~d~~~~~~ipV~~I~GNHD~~~~~~~~~~~d~L~~~g~v~~ 151 (447)
..++|+++|. |.|.. ...+-|...|+-++
T Consensus 88 --------------------------~~giP~ivI~---D~p~~----k~~d~~~~~gfGYI 116 (282)
T d1u6ka1 88 --------------------------DSEYPAVIIG---DAPGL----KVKDEMEEQGLGYI 116 (282)
T ss_dssp --------------------------TSSSCEEEEE---EGGGG----GGHHHHHHTTCEEE
T ss_pred --------------------------hcCCCEEEEc---CCcch----hhHHHHHhcCCcEE
Confidence 3689999995 66643 35677888886433
No 55
>d1x52a1 d.79.3.2 (A:8-118) Cell division protein pelota {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.09 E-value=21 Score=27.06 Aligned_cols=57 Identities=14% Similarity=0.248 Sum_probs=39.2
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCCCHH-HHHHHHHHHHHhhcCCCCcceeeechhhhcccccccccccCCCCCCCC
Q 013207 40 FEEICSIAEQKEVDFVLLGGDLFHENKPSRS-TLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVG 118 (447)
Q Consensus 40 feeil~~a~~~~vD~VliaGDLfd~~~ps~~-~l~~~~~~L~~l~~~~~~~~~~~lsd~~~~f~~~~~~~n~~d~~~~~~ 118 (447)
++++...+...-||.+|++=||+....+... .+...++..+ +.+
T Consensus 36 ~~ev~~Ale~GAV~~LLisd~l~r~~~~~~r~~i~~l~~~~~-----------------------------------~~g 80 (111)
T d1x52a1 36 LKQVEKANEAMAIDTLLISDELFRHQDVATRSRYVRLVDSVK-----------------------------------ENA 80 (111)
T ss_dssp HHHHHHHHHTTCEEEEEEEHHHHTCSSHHHHHHHHHHHHHHH-----------------------------------HTT
T ss_pred HHHHHHHHHcCCCcEEEEecccccccchhhHHHHHHHHHHHH-----------------------------------hcC
Confidence 4677777778889999999999876543322 2222333333 247
Q ss_pred CcEEEECCCCCCC
Q 013207 119 LPVFSIHGNHDDP 131 (447)
Q Consensus 119 ipV~~I~GNHD~~ 131 (447)
..|++|+.+|+..
T Consensus 81 ~~v~iiS~~~e~G 93 (111)
T d1x52a1 81 GTVRIFSSLHVSG 93 (111)
T ss_dssp CEEEEECSSSHHH
T ss_pred CEEEEEcCCChhH
Confidence 8899999999874
No 56
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}
Probab=23.08 E-value=93 Score=22.87 Aligned_cols=22 Identities=32% Similarity=0.152 Sum_probs=17.0
Q ss_pred HHHHHHHHHHcCCCEEEEcCCC
Q 013207 40 FEEICSIAEQKEVDFVLLGGDL 61 (447)
Q Consensus 40 feeil~~a~~~~vD~VliaGDL 61 (447)
.++.++.+.+..+|+||+--.+
T Consensus 34 ~~~al~~l~~~~~dlillD~~m 55 (122)
T d1kgsa2 34 GEEGMYMALNEPFDVVILDIML 55 (122)
T ss_dssp HHHHHHHHHHSCCSEEEEESCC
T ss_pred hHHHHHHHHhhCcccccccccc
Confidence 4667788889999999975444
No 57
>d3bzka5 c.55.3.13 (A:325-473) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.87 E-value=1.5e+02 Score=23.17 Aligned_cols=40 Identities=18% Similarity=0.370 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHH
Q 013207 37 FEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRR 81 (447)
Q Consensus 37 ~~~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~ 81 (447)
-.+-+.+.+++.+.+|++|.+++ ..-++++-....+++++
T Consensus 45 ~~a~~~l~~li~k~~p~vIaIGN-----gTasre~~~~v~~l~~~ 84 (149)
T d3bzka5 45 DQTLAVLAALCAKHQVELIAIGN-----GTASRETDKLAGELIKK 84 (149)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEES-----STTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEECC-----CccHHHHHHHHHHHHHh
Confidence 44556788888899999999953 33355554444455544
No 58
>d1w3ex1 d.79.3.1 (X:1-98) Eukaryotic ribosomal protein L30 (L30e) {Archaeon Thermococcus celer [TaxId: 2264]}
Probab=22.82 E-value=44 Score=24.37 Aligned_cols=22 Identities=5% Similarity=0.114 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCCCEEEEcCCC
Q 013207 40 FEEICSIAEQKEVDFVLLGGDL 61 (447)
Q Consensus 40 feeil~~a~~~~vD~VliaGDL 61 (447)
+++++..++..++-+|++|.|.
T Consensus 20 ~~~v~kal~~gkaklVilA~D~ 41 (98)
T d1w3ex1 20 ARKSIQYAKMGGAKLIIVARNA 41 (98)
T ss_dssp HHHHHHHHHHTCCSEEEEETTS
T ss_pred HHHHHHHHHcCCccEEEEECCC
Confidence 4778888899999999999997
No 59
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=22.67 E-value=50 Score=25.59 Aligned_cols=39 Identities=10% Similarity=-0.049 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHH
Q 013207 39 AFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRR 81 (447)
Q Consensus 39 ~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~ 81 (447)
..+++++.|.++++|+|.++.=+.+ +...+.++++.|++
T Consensus 42 p~e~iv~a~~~~~~d~v~lS~~~~~----~~~~~~~~~~~l~~ 80 (137)
T d1ccwa_ 42 PQELFIKAAIETKADAILVSSLYGQ----GEIDCKGLRQKCDE 80 (137)
T ss_dssp CHHHHHHHHHHHTCSEEEEEECSST----HHHHHTTHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEeecccc----chHHHHHHHHHHHH
Confidence 3588999999999999999876554 34455666677775
No 60
>d1xrsb1 c.23.6.1 (B:102-261) D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain {Clostridium sticklandii [TaxId: 1511]}
Probab=21.98 E-value=77 Score=25.22 Aligned_cols=42 Identities=24% Similarity=0.300 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHH
Q 013207 39 AFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRR 81 (447)
Q Consensus 39 ~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~ 81 (447)
.-+++++.|.+++||+|.++.=+.... .....+.++++.|++
T Consensus 67 p~e~~v~~a~e~~~d~VglS~l~t~~~-~h~~~~~~~i~~l~~ 108 (160)
T d1xrsb1 67 ANEDFIKKAVELEADVLLVSQTVTQKN-VHIQNMTHLIELLEA 108 (160)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCCTTS-HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEeecccccc-hhHHHHHHHHHHHHH
Confidence 458899999999999999998665432 223445667777776
No 61
>d1nn4a_ c.121.1.1 (A:) Alternate ribose 5-phosphate isomerase B, RpiB {Escherichia coli [TaxId: 562]}
Probab=21.74 E-value=76 Score=25.42 Aligned_cols=44 Identities=18% Similarity=0.217 Sum_probs=30.9
Q ss_pred CCCCCceEEEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q 013207 7 EDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFH 63 (447)
Q Consensus 7 ~~~~~~mrILh~SD~HLG~~~~~~~r~~d~~~~feeil~~a~~~~vD~VliaGDLfd 63 (447)
+....|+||.+.|| |-|+. .=+++++...+.+.+++=++-+-.+
T Consensus 9 ~~~~~mkkI~igsD-haG~~------------lK~~l~~~L~~~g~~V~D~G~~~~~ 52 (159)
T d1nn4a_ 9 PRGSQMKKIAFGCD-HVGFI------------LKHEIVAHLVERGVEVIDKGTWSSE 52 (159)
T ss_dssp ECCCSCSEEEEEEC-TTTHH------------HHHHHHHHHHHTTCEEEECCCCSSS
T ss_pred ccccCceEEEEEeC-CchHH------------HHHHHHHHHHHCCCEEEECCCCccc
Confidence 34556679999999 99853 2366777788889987765544433
No 62
>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=21.25 E-value=63 Score=26.04 Aligned_cols=41 Identities=15% Similarity=-0.011 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHh
Q 013207 38 EAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRH 82 (447)
Q Consensus 38 ~~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~l 82 (447)
.+-+++++.|.++++|+|.++.=.- .....+.++++.|++.
T Consensus 75 ~~~e~iv~aa~~~~advI~iSs~~~----~~~~~~~~l~~~L~~~ 115 (168)
T d7reqa2 75 QTPEETARQAVEADVHVVGVSSLAG----GHLTLVPALRKELDKL 115 (168)
T ss_dssp BCHHHHHHHHHHHTCSEEEEEECSS----CHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHccCCCEEEEecCcc----cchHHHHHHHHHHHhc
Confidence 3568999999999999999993221 2344556667777763
No 63
>d1gg4a1 c.59.1.1 (A:313-447) UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli [TaxId: 562]}
Probab=21.02 E-value=93 Score=23.61 Aligned_cols=45 Identities=16% Similarity=0.106 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHH
Q 013207 37 FEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRR 81 (447)
Q Consensus 37 ~~~feeil~~a~~~~vD~VliaGDLfd~~~ps~~~l~~~~~~L~~ 81 (447)
..++...++...+....-+++.||+.+-..-+...-.+..+.+.+
T Consensus 25 P~Sm~aAl~~l~~~~~~ki~vLGdM~ELG~~s~~~H~~l~~~~~~ 69 (135)
T d1gg4a1 25 VGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHVQVGEAAKA 69 (135)
T ss_dssp HHHHHHHHHHHHHSSSEEEEEECCCCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCceEEEcccccchhhHHHHHHHHHHHHHh
Confidence 345666666666666678999999999876555544445555554
No 64
>d1t0kb_ d.79.3.1 (B:) Eukaryotic ribosomal protein L30 (L30e) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.70 E-value=1.4e+02 Score=21.25 Aligned_cols=22 Identities=5% Similarity=0.279 Sum_probs=19.7
Q ss_pred HHHHHHHHHHcCCCEEEEcCCC
Q 013207 40 FEEICSIAEQKEVDFVLLGGDL 61 (447)
Q Consensus 40 feeil~~a~~~~vD~VliaGDL 61 (447)
+++++..+++.++-+|+++.|.
T Consensus 19 ~~~v~k~i~~gkaklVilA~D~ 40 (97)
T d1t0kb_ 19 YKSTVKSLRQGKSKLIIIAANT 40 (97)
T ss_dssp HHHHHHHHHHTCCSEEEECTTC
T ss_pred HHHHHHHHHcCCCcEEEEeCCC
Confidence 5778888899999999999996
No 65
>d1gsoa2 c.30.1.1 (A:-2-103) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Escherichia coli [TaxId: 562]}
Probab=20.52 E-value=33 Score=25.65 Aligned_cols=20 Identities=15% Similarity=0.521 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHcCCCEEEEc
Q 013207 39 AFEEICSIAEQKEVDFVLLG 58 (447)
Q Consensus 39 ~feeil~~a~~~~vD~Vlia 58 (447)
.++++++.|+++++|+|+++
T Consensus 54 d~~~i~~~a~~~~idlvviG 73 (105)
T d1gsoa2 54 DIPALLDFAQNEKIDLTIVG 73 (105)
T ss_dssp CHHHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHHHhCcCEEEEC
Confidence 47899999999999999986
No 66
>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}
Probab=20.38 E-value=55 Score=29.73 Aligned_cols=25 Identities=28% Similarity=0.336 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHcCCCEEEEcCCCCC
Q 013207 39 AFEEICSIAEQKEVDFVLLGGDLFH 63 (447)
Q Consensus 39 ~feeil~~a~~~~vD~VliaGDLfd 63 (447)
+...+-+...+.+||+|++.||-|.
T Consensus 74 ~i~~~~~~~~~~kPD~v~v~GDr~e 98 (376)
T d1f6da_ 74 ILEGLKPILAEFKPDVVLVHGDTTT 98 (376)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTCHH
T ss_pred HHHhhHHHHHhccCcceeeeccccc
Confidence 4455556677899999999999654
No 67
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}
Probab=20.09 E-value=1.4e+02 Score=21.71 Aligned_cols=22 Identities=14% Similarity=0.057 Sum_probs=16.9
Q ss_pred HHHHHHHHHHcCCCEEEEcCCC
Q 013207 40 FEEICSIAEQKEVDFVLLGGDL 61 (447)
Q Consensus 40 feeil~~a~~~~vD~VliaGDL 61 (447)
.++.++.+.++.+|+|++-=.+
T Consensus 33 g~eal~~l~~~~~dliilD~~m 54 (119)
T d2pl1a1 33 AKEADYYLNEHIPDIAIVDLGL 54 (119)
T ss_dssp HHHHHHHHHHSCCSEEEECSCC
T ss_pred HHHHHHHHHhcccceeehhccC
Confidence 4677888889999999874443
Done!