Query 013209
Match_columns 447
No_of_seqs 257 out of 2307
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 06:15:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013209.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013209hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ner_A Cytochrome B5 type B; h 99.9 9.8E-25 3.3E-29 169.6 5.3 82 2-84 6-88 (92)
2 3lf5_A Cytochrome B5 reductase 99.9 5.7E-25 1.9E-29 169.5 3.0 83 1-84 1-84 (88)
3 1cyo_A Cytochrome B5; electron 99.9 1.7E-24 5.7E-29 169.0 5.0 83 3-86 2-85 (93)
4 1cxy_A Cytochrome B5; helix, b 99.9 4.1E-24 1.4E-28 166.0 6.2 80 2-82 4-88 (90)
5 2ibj_A Cytochrome B5, CYTB5; F 99.9 3.3E-24 1.1E-28 166.1 4.3 81 3-84 4-85 (88)
6 1hko_A Cytochrome B5; electron 99.9 3.8E-24 1.3E-28 169.9 3.9 83 2-85 5-88 (104)
7 2keo_A Probable E3 ubiquitin-p 99.9 1.1E-24 3.6E-29 174.6 -0.0 83 1-84 19-102 (112)
8 1x3x_A Cytochrome B5; hemoprot 99.9 3E-23 1E-27 158.4 3.6 74 5-80 3-81 (82)
9 1mj4_A Sulfite oxidase; cytoch 99.9 4.8E-23 1.6E-27 157.1 4.0 76 3-80 2-82 (82)
10 1kbi_A Cytochrome B2, L-LCR; f 99.7 1.7E-17 6E-22 169.1 4.7 82 3-85 6-89 (511)
11 1sox_A Sulfite oxidase; oxidor 99.7 2.1E-17 7.3E-22 165.7 5.2 79 3-83 2-85 (466)
12 1j03_A Putative steroid bindin 99.5 3.5E-15 1.2E-19 117.7 5.3 59 5-65 2-65 (102)
13 3fbl_A Putative uncharacterize 46.9 43 0.0015 22.7 5.0 30 386-415 1-30 (82)
14 2xl1_A Arginine attenuator pep 35.4 5.9 0.0002 21.1 -0.5 15 432-446 11-25 (26)
15 2dae_A KIAA0733 protein; mitog 23.9 35 0.0012 24.0 1.7 16 368-383 8-26 (75)
No 1
>3ner_A Cytochrome B5 type B; heme, electron transport; HET: HEM; 1.45A {Homo sapiens} SCOP: d.120.1.1 PDB: 1awp_A* 3mus_A* 1b5m_A* 1eue_A* 1icc_A* 1lj0_A* 2i89_A*
Probab=99.90 E-value=9.8e-25 Score=169.62 Aligned_cols=82 Identities=34% Similarity=0.665 Sum_probs=76.5
Q ss_pred CccCCCCCHHHHhcccCCCCeEEEEcCEEEEcccccccccccccceecccCCChhHHHHh-cCchhHHHhhhhccCCccc
Q 013209 2 EAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIA-YHPGTAWQYLDKLFTGYYV 80 (447)
Q Consensus 2 ~~~~~~~~~~e~~~h~~~~~~~v~i~g~vyd~t~~~~~hpgg~~~i~~~~g~D~t~~f~~-~H~~~~~~~l~~~~vg~~~ 80 (447)
.++.+.||++||++|++.++|||+|+|+|||||+|++.||||..+|..++|+|+|++|+. .||..|+++|++|+|| ++
T Consensus 6 ~~~~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~l~~~aG~DaT~~F~~~~Hs~~a~~~L~~~~IG-~l 84 (92)
T 3ner_A 6 ETSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIG-DI 84 (92)
T ss_dssp CCCSCEECHHHHTTCEETTEEEEEETTEEEECGGGTTTCTTCSHHHHTTTTSBCHHHHHHTTCCHHHHHHHGGGEEE-EE
T ss_pred CCCCCeeCHHHHHhhCCCCCEEEEECCEEEEcccccccCCCHHHHHHHhcCCcchHHHHHcCCCHHHHHHHHhCeeE-EE
Confidence 356789999999999999999999999999999999999999999999999999999997 6999999999999999 88
Q ss_pred cCcc
Q 013209 81 QDFE 84 (447)
Q Consensus 81 ~~~~ 84 (447)
.+++
T Consensus 85 ~~~~ 88 (92)
T 3ner_A 85 HPSD 88 (92)
T ss_dssp CGGG
T ss_pred ChHh
Confidence 7644
No 2
>3lf5_A Cytochrome B5 reductase 4; NCB5OR, electron transfer, redox, heme, endoplasmic reticulu flavoprotein, iron, metal-binding, NAD, oxidoreductase; HET: HEM; 1.25A {Homo sapiens}
Probab=99.90 E-value=5.7e-25 Score=169.46 Aligned_cols=83 Identities=35% Similarity=0.538 Sum_probs=76.2
Q ss_pred CCccCCCCCHHHHhcccCCCCeEEEEcCEEEEcccccccccccccceecccCCChhHHHHhcCch-hHHHhhhhccCCcc
Q 013209 1 MEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPG-TAWQYLDKLFTGYY 79 (447)
Q Consensus 1 ~~~~~~~~~~~e~~~h~~~~~~~v~i~g~vyd~t~~~~~hpgg~~~i~~~~g~D~t~~f~~~H~~-~~~~~l~~~~vg~~ 79 (447)
|..+++.||++||++|++.++|||+|+|+|||||+|++.||||.+.|..++|+|+|++|+++|+. .++++|++|+|| +
T Consensus 1 ~~~~l~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~l~~~aG~DaT~~F~~~h~~~~~~~~L~~~~IG-~ 79 (88)
T 3lf5_A 1 MKGRLIEVTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNYESMLKECLVG-R 79 (88)
T ss_dssp -CCSSEEECHHHHHHCEETTEEEEEETTEEEECGGGTTTCTTCHHHHHTTTTEECHHHHHHHHTTCCHHHHTGGGEEE-E
T ss_pred CCCCCCEeCHHHHHhhCCCCCEEEEECCEEEECccchhhCcChhhhhhhcCCCcchHHHHHHCCcHHHHHHHHcCeeE-E
Confidence 67788999999999999999999999999999999999999999999999999999999998766 578899999999 8
Q ss_pred ccCcc
Q 013209 80 VQDFE 84 (447)
Q Consensus 80 ~~~~~ 84 (447)
+++++
T Consensus 80 l~~~~ 84 (88)
T 3lf5_A 80 MAIKP 84 (88)
T ss_dssp ECCCG
T ss_pred eCCCc
Confidence 87654
No 3
>1cyo_A Cytochrome B5; electron transport; HET: HEM; 1.50A {Bos taurus} SCOP: d.120.1.1 PDB: 1bfx_A* 1i87_A 1i8c_A 1iet_A 1ieu_A 1do9_A* 1aqa_A* 1aw3_A* 1axx_A* 1b5a_A* 1b5b_A* 1blv_A* 1mny_A* 2axx_A* 1ib7_A* 1jex_A* 1ehb_A* 1nx7_A* 1u9u_A* 1m20_A* ...
Probab=99.90 E-value=1.7e-24 Score=169.02 Aligned_cols=83 Identities=33% Similarity=0.548 Sum_probs=76.6
Q ss_pred ccCCCCCHHHHhcccCCCCeEEEEcCEEEEcccccccccccccceecccCCChhHHHHh-cCchhHHHhhhhccCCcccc
Q 013209 3 AEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIA-YHPGTAWQYLDKLFTGYYVQ 81 (447)
Q Consensus 3 ~~~~~~~~~e~~~h~~~~~~~v~i~g~vyd~t~~~~~hpgg~~~i~~~~g~D~t~~f~~-~H~~~~~~~l~~~~vg~~~~ 81 (447)
++.+.||++||++|++.++|||+|+|+|||||+|++.||||..+|..++|+|+|++|+. .|+..|+++|++|+|| ++.
T Consensus 2 ~~~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aG~DaT~~f~~~~Hs~~a~~~L~~~~IG-~l~ 80 (93)
T 1cyo_A 2 KAVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIG-ELH 80 (93)
T ss_dssp CSCCEECHHHHTTCEETTEEEEEETTEEEECTTTTTTCTTCSHHHHHHTTSBCHHHHHHTTCCHHHHHHHTTTEEE-EEC
T ss_pred CCCCccCHHHHHhhCCCCCEEEEECCEEEECCCcchhCcChHHHHHHhcCccchHHHHHcCCCHHHHHHHHhCeeE-Eec
Confidence 45789999999999999999999999999999999999999999999999999999997 5999999999999999 887
Q ss_pred Cccch
Q 013209 82 DFEVS 86 (447)
Q Consensus 82 ~~~~~ 86 (447)
+++..
T Consensus 81 ~~~~~ 85 (93)
T 1cyo_A 81 PDDRS 85 (93)
T ss_dssp GGGGG
T ss_pred Ccccc
Confidence 65443
No 4
>1cxy_A Cytochrome B5; helix, beta-strand, electron transport; HET: HEM; 1.65A {Ectothiorhodospira shaposhnikovii} SCOP: d.120.1.1
Probab=99.89 E-value=4.1e-24 Score=166.05 Aligned_cols=80 Identities=33% Similarity=0.585 Sum_probs=73.0
Q ss_pred CccCCCCCHHHHhcccCCCCeEEEEcCEEEEcccccccccccccceecccCCChhHHHH-----hcCchhHHHhhhhccC
Q 013209 2 EAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFI-----AYHPGTAWQYLDKLFT 76 (447)
Q Consensus 2 ~~~~~~~~~~e~~~h~~~~~~~v~i~g~vyd~t~~~~~hpgg~~~i~~~~g~D~t~~f~-----~~H~~~~~~~l~~~~v 76 (447)
++..+.||++||++|++.++|||+|+|+|||||+|++.||||.++|..++|+|+|+.|+ ..|+..|+++|++|+|
T Consensus 4 ~~~~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aG~DaT~~f~~~~~~~~Hs~~a~~~L~~~~I 83 (90)
T 1cxy_A 4 EATLPVFTLEQVAEHHSPDDCWMAIHGKVYDLTPYVPNHPGPAGMMLVWCGQESTEAWETKSYGEPHSSLAARLLQRYLI 83 (90)
T ss_dssp --CCCBCCHHHHTTCEETTEEEEEETTEEEECTTTGGGCCSSTTTTGGGTTSBCHHHHHHTTTTCCCCHHHHHHHHHTEE
T ss_pred cccCCCcCHHHHHHhcCCCCEEEEECCEEEECccchhhCcChHHHHHHHCCcchhHHHhhcccccCCCHHHHHHHHhCce
Confidence 34568999999999999999999999999999999999999999999999999999999 7899999999999999
Q ss_pred CccccC
Q 013209 77 GYYVQD 82 (447)
Q Consensus 77 g~~~~~ 82 (447)
| ++++
T Consensus 84 G-~l~~ 88 (90)
T 1cxy_A 84 G-TLEE 88 (90)
T ss_dssp E-EC--
T ss_pred e-EeCC
Confidence 9 7753
No 5
>2ibj_A Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY diffraction, heme, electron transport; HET: HEM; 1.55A {Musca domestica}
Probab=99.89 E-value=3.3e-24 Score=166.10 Aligned_cols=81 Identities=32% Similarity=0.564 Sum_probs=75.6
Q ss_pred ccCCCCCHHHHhcccCCCCeEEEEcCEEEEcccccccccccccceecccCCChhHHHHh-cCchhHHHhhhhccCCcccc
Q 013209 3 AEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIA-YHPGTAWQYLDKLFTGYYVQ 81 (447)
Q Consensus 3 ~~~~~~~~~e~~~h~~~~~~~v~i~g~vyd~t~~~~~hpgg~~~i~~~~g~D~t~~f~~-~H~~~~~~~l~~~~vg~~~~ 81 (447)
++.+.||++||++|++.++|||+|+|+|||||+|++.||||..+|..++|+|+|++|+. .|+..|+++|++|+|| ++.
T Consensus 4 ~~~~~~t~~ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aG~DaT~~f~~~~Hs~~a~~~L~~~~IG-~l~ 82 (88)
T 2ibj_A 4 EDVKYFTRAEVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSDAREMMKQYKVG-ELV 82 (88)
T ss_dssp CCCCEECHHHHHTSEETTEEEEEETTEEEECGGGTTTCTTCSHHHHTTTTEECHHHHHHHTCCHHHHHHHGGGEEE-EEC
T ss_pred ccCCccCHHHHHHhCCCCCEEEEECCEEEECCcchhhCcCHHHHHHHhCCCcchHHHHHcCCCHHHHHHHHcCceE-EeC
Confidence 46789999999999999999999999999999999999999999999999999999996 6999999999999999 886
Q ss_pred Ccc
Q 013209 82 DFE 84 (447)
Q Consensus 82 ~~~ 84 (447)
+++
T Consensus 83 ~~~ 85 (88)
T 2ibj_A 83 AEE 85 (88)
T ss_dssp GGG
T ss_pred ccc
Confidence 543
No 6
>1hko_A Cytochrome B5; electron transfer protein, heme, electron transport; HET: HEM; NMR {Bos taurus} SCOP: d.120.1.1 PDB: 2i96_A*
Probab=99.89 E-value=3.8e-24 Score=169.90 Aligned_cols=83 Identities=31% Similarity=0.540 Sum_probs=76.7
Q ss_pred CccCCCCCHHHHhcccCCCCeEEEEcCEEEEcccccccccccccceecccCCChhHHHHh-cCchhHHHhhhhccCCccc
Q 013209 2 EAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIA-YHPGTAWQYLDKLFTGYYV 80 (447)
Q Consensus 2 ~~~~~~~~~~e~~~h~~~~~~~v~i~g~vyd~t~~~~~hpgg~~~i~~~~g~D~t~~f~~-~H~~~~~~~l~~~~vg~~~ 80 (447)
.++.+.||++||++|++.++|||+|+|+|||||+|++.||||..+|..++|+|+|++|+. .|+..++++|++|+|| ++
T Consensus 5 ~~~~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aGkDaT~~F~~~~Hs~~a~~~L~~~~IG-~l 83 (104)
T 1hko_A 5 SKAVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIG-EL 83 (104)
T ss_dssp CCCCEEECHHHHHHCBSSSSBEEEETTEEEEHHHHSSSSSSCSHHHHTTCSEECHHHHTTTTCCHHHHHHHTTTEEE-EE
T ss_pred cccCCccCHHHHHHhcCCCCEEEEECCEEEECCcchhhCcChHHHHHHhcCccchHHHHHcCCCHHHHHHHHcCeeE-EE
Confidence 356789999999999999999999999999999999999999999999999999999997 5999999999999999 88
Q ss_pred cCccc
Q 013209 81 QDFEV 85 (447)
Q Consensus 81 ~~~~~ 85 (447)
.+.+.
T Consensus 84 ~~~~~ 88 (104)
T 1hko_A 84 HPDDR 88 (104)
T ss_dssp CTTSS
T ss_pred CCccc
Confidence 76443
No 7
>2keo_A Probable E3 ubiquitin-protein ligase HERC2; protein of unknown function, HERC2 cytochrome domain, ligase binding, phosphoprotein; NMR {Homo sapiens}
Probab=99.88 E-value=1.1e-24 Score=174.63 Aligned_cols=83 Identities=22% Similarity=0.373 Sum_probs=76.2
Q ss_pred CCccCCCCCHHHHhcccCCCCeEEEEcCEEEEcccccccccccccceecccCCChhHHHHh-cCchhHHHhhhhccCCcc
Q 013209 1 MEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIA-YHPGTAWQYLDKLFTGYY 79 (447)
Q Consensus 1 ~~~~~~~~~~~e~~~h~~~~~~~v~i~g~vyd~t~~~~~hpgg~~~i~~~~g~D~t~~f~~-~H~~~~~~~l~~~~vg~~ 79 (447)
|.++.+.||++||++|++.++|||+|+|+|||||+|++.||||.++|..++|+|+|++|++ +|+..|+++|++|+|| +
T Consensus 19 m~~~~~~~t~~Ev~~h~~~~d~wvvi~G~VYDVT~fl~~HPGG~~~l~~~aGkDaT~~F~~~~Hs~~a~~~L~~~~IG-~ 97 (112)
T 2keo_A 19 NNEKVTLVRIADLENHNNDGGFWTVIDGKVYDIKDFQTQSLTENSILAQFAGEDPVVALEAALQFEDTRESMHAFCVG-Q 97 (112)
T ss_dssp --CCCCEECHHHHHHHHHHTCCEEEETTEEEEHHHHHHHHTSTTSTTGGGTTSCHHHHHHHHHHSTTGGGTHHHHEEE-E
T ss_pred CCCCCCccCHHHHHHhcCCCCEEEEECCEEEECCcchhhCCCchhhhhhhCCccchHHHhHcCCCHHHHHHHHhCceE-e
Confidence 4566789999999999999999999999999999999999999999999999999999998 6999999999999999 8
Q ss_pred ccCcc
Q 013209 80 VQDFE 84 (447)
Q Consensus 80 ~~~~~ 84 (447)
+.+++
T Consensus 98 l~~~e 102 (112)
T 2keo_A 98 YLEPD 102 (112)
T ss_dssp ECCHH
T ss_pred eCCcc
Confidence 87543
No 8
>1x3x_A Cytochrome B5; hemoprotein, porcine parasitic namatode, electron transport; HET: HEM; 1.80A {Ascaris suum}
Probab=99.87 E-value=3e-23 Score=158.37 Aligned_cols=74 Identities=41% Similarity=0.596 Sum_probs=69.7
Q ss_pred CCCCCHHHHhcccCCCCeEEEEcCEEEEcccccccccccccceecccCCChhHH--HHhc---CchhHHHhhhhccCCcc
Q 013209 5 KKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDA--FIAY---HPGTAWQYLDKLFTGYY 79 (447)
Q Consensus 5 ~~~~~~~e~~~h~~~~~~~v~i~g~vyd~t~~~~~hpgg~~~i~~~~g~D~t~~--f~~~---H~~~~~~~l~~~~vg~~ 79 (447)
.+.||++||++|++.++|||+|+|+|||||+|++.|||| +.|..++|+|+|++ |+++ |+..++++|++|+|| +
T Consensus 3 ~~~~t~~ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG-~~i~~~aG~D~T~~~~F~~~h~~hs~~a~~~L~~~~IG-~ 80 (82)
T 1x3x_A 3 DKKYTKEEVAKHNTQNDLWIIYDGEVHDMTSFYKEHPGG-KVILNKAGQDATSVLKTLAPHVKAADVVMKKLKQTCIG-K 80 (82)
T ss_dssp SCEECHHHHHTCEETTEEEEEETTEEEECGGGGGGCTTG-GGGGGGTTSBCHHHHHHSHHHHHTHHHHHHHHHHHEEE-E
T ss_pred CCccCHHHHHhhCCCCCEEEEECCEEEECCcchhhCcCh-hhhhhhCCCCCchhhhhhcccccchHHHHHHHHhCcce-E
Confidence 578999999999999999999999999999999999999 88999999999999 9986 588899999999999 6
Q ss_pred c
Q 013209 80 V 80 (447)
Q Consensus 80 ~ 80 (447)
+
T Consensus 81 l 81 (82)
T 1x3x_A 81 V 81 (82)
T ss_dssp E
T ss_pred e
Confidence 5
No 9
>1mj4_A Sulfite oxidase; cytochrome B5, heme, oxidoreductase; HET: HEM; 1.20A {Homo sapiens} SCOP: d.120.1.1
Probab=99.87 E-value=4.8e-23 Score=157.08 Aligned_cols=76 Identities=29% Similarity=0.538 Sum_probs=67.5
Q ss_pred ccCCCCCHHHHhcccCCCC-eEEEEcCEEEEcccccccccccccceecccCCChhHHHHh----cCchhHHHhhhhccCC
Q 013209 3 AEKKYITAEELRTHNKAED-LWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIA----YHPGTAWQYLDKLFTG 77 (447)
Q Consensus 3 ~~~~~~~~~e~~~h~~~~~-~~v~i~g~vyd~t~~~~~hpgg~~~i~~~~g~D~t~~f~~----~H~~~~~~~l~~~~vg 77 (447)
++.+.||++||++|++.++ |||+|+|+|||||+|++.||||.+.|+.++|+| |++|++ .|+..|+++|++|+||
T Consensus 2 ~~~~~~t~~ev~~h~~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~il~~aG~D-t~~f~~~~~~~hs~~a~~~L~~~~IG 80 (82)
T 1mj4_A 2 ESTHIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGP-LEPFWALYAVHNQSHVRELLAQYKIG 80 (82)
T ss_dssp -CCCBCCCC-CTTCEETTTEEEEEETTEEEECTTTGGGSTTCHHHHHTTTTSB-SHHHHTTCGGGCSHHHHHHHHTTEEE
T ss_pred CCCCccCHHHHHHhcCCCCCeEEEECCEEEEchHHHHhCCCHhHHHHHHcCCC-hHHHHhhccccCcHHHHHHHHhCcce
Confidence 4678999999999999997 999999999999999999999977788899999 678884 5788999999999999
Q ss_pred ccc
Q 013209 78 YYV 80 (447)
Q Consensus 78 ~~~ 80 (447)
++
T Consensus 81 -~l 82 (82)
T 1mj4_A 81 -EL 82 (82)
T ss_dssp -EC
T ss_pred -eC
Confidence 54
No 10
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.67 E-value=1.7e-17 Score=169.12 Aligned_cols=82 Identities=34% Similarity=0.547 Sum_probs=74.4
Q ss_pred ccCCCCCHHHHhcccCCCCeEEEEcCEEEEcccccccccccccceecccCCChhHHHHhcCchhHH-Hhh-hhccCCccc
Q 013209 3 AEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW-QYL-DKLFTGYYV 80 (447)
Q Consensus 3 ~~~~~~~~~e~~~h~~~~~~~v~i~g~vyd~t~~~~~hpgg~~~i~~~~g~D~t~~f~~~H~~~~~-~~l-~~~~vg~~~ 80 (447)
...+.||++||++|++.++|||+|+|+|||||+|++.||||.+.|..++|+|+|+.|+.+|+..+. ++| ++|+|| ++
T Consensus 6 ~~~~~~t~~ev~~h~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~i~~~aG~DaT~~f~~~H~~~~~~~~l~~~~~iG-~l 84 (511)
T 1kbi_A 6 MNKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLHAPNVIDKYIAPEKKLG-PL 84 (511)
T ss_dssp SCSCCBCTTHHHHCEETTEEEEEETTEEEECTTTGGGCTTCHHHHHTTTTSBCHHHHGGGSCTTHHHHHSCGGGEEE-EB
T ss_pred CCCCccCHHHHHHhCCCCCEEEEECCEEEECCcchhhCcChHHHHHHHcCcchhhhhhhcCCHHHHHHhhccccEEE-Ee
Confidence 456899999999999999999999999999999999999999999999999999999999999875 455 889999 88
Q ss_pred cCccc
Q 013209 81 QDFEV 85 (447)
Q Consensus 81 ~~~~~ 85 (447)
++.+.
T Consensus 85 ~~~~~ 89 (511)
T 1kbi_A 85 QGSMP 89 (511)
T ss_dssp CSCCC
T ss_pred cCCcc
Confidence 76544
No 11
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*
Probab=99.67 E-value=2.1e-17 Score=165.71 Aligned_cols=79 Identities=27% Similarity=0.423 Sum_probs=72.0
Q ss_pred ccCCCCCHHHHhcccCCCC-eEEEEcCEEEEcccccccccccccceecccCCChhHHHHh----cCchhHHHhhhhccCC
Q 013209 3 AEKKYITAEELRTHNKAED-LWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIA----YHPGTAWQYLDKLFTG 77 (447)
Q Consensus 3 ~~~~~~~~~e~~~h~~~~~-~~v~i~g~vyd~t~~~~~hpgg~~~i~~~~g~D~t~~f~~----~H~~~~~~~l~~~~vg 77 (447)
++.+.||++||++|++.++ |||+|+|+|||||+|+++||||.+.|+.++|+| |+.|+. .|+..++++|++|+||
T Consensus 2 ~~~~~~t~~Ev~~H~~~~d~~Wvii~g~VYDvT~fl~~HPGG~~~il~~aG~D-T~~f~~~~~~~Hs~~a~~~L~~~~IG 80 (466)
T 1sox_A 2 PSYPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGGA-LEPFWALYAVHGEPHVLELLQQYKVG 80 (466)
T ss_dssp -CCCEECHHHHTTCEETTTEEEEEETTEEEECTTTTTTSTTCHHHHGGGTTSB-SHHHHHHSGGGGSHHHHHHHHTTEEE
T ss_pred CCCCeeCHHHHHHhcCCCCceEEEECCEEEechHhHhhCcCCcccchhhcCCc-cccccccccccCCHHHHHHHHhCceE
Confidence 4568999999999999998 999999999999999999999988899999999 999984 6899999999999999
Q ss_pred ccccCc
Q 013209 78 YYVQDF 83 (447)
Q Consensus 78 ~~~~~~ 83 (447)
++.++
T Consensus 81 -~l~~~ 85 (466)
T 1sox_A 81 -ELSPD 85 (466)
T ss_dssp -EECCC
T ss_pred -Eeccc
Confidence 78643
No 12
>1j03_A Putative steroid binding protein; alpha and beta, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.120.1.2 PDB: 1t0g_A
Probab=99.54 E-value=3.5e-15 Score=117.67 Aligned_cols=59 Identities=31% Similarity=0.462 Sum_probs=51.9
Q ss_pred CCCCCHHHHhcccCCC---CeEEEEcCEEEEcccccc-cccccccceecccCCChhHHHHhc-Cch
Q 013209 5 KKYITAEELRTHNKAE---DLWISIQGKVYDVTEWAK-QHPGGDVPLLNLAGQDVTDAFIAY-HPG 65 (447)
Q Consensus 5 ~~~~~~~e~~~h~~~~---~~~v~i~g~vyd~t~~~~-~hpgg~~~i~~~~g~D~t~~f~~~-H~~ 65 (447)
++.||++||++||+.+ +|||+|+|+|||||+|.+ .||||. +..+||+|||++|..+ |+.
T Consensus 2 ~~~~T~~El~~~ng~~~~~~~~vaI~G~VYDVT~~~~~~hPGG~--~~~~AG~DaT~~f~~~~~~~ 65 (102)
T 1j03_A 2 PMEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGD--YSMFAGKDASRALGKMSKNE 65 (102)
T ss_dssp CCCCCHHHHTTCBSCSSSCCBEEEETTEEEECGGGHHHHSSSST--TTTTTTSBCHHHHHHTCCCS
T ss_pred CcccCHHHHHHhcCCCCCCCEEEEECCEEEECCCCccccCCCCc--ccccccchHHHHHHHcCCCh
Confidence 3689999999999876 799999999999999976 699998 4589999999999975 544
No 13
>3fbl_A Putative uncharacterized protein; AFV1, archaeal virus, extremophiles, lipothrixviridae, structural protein, DNA-binding protein; 1.95A {Acidianus filamentous virus 1}
Probab=46.91 E-value=43 Score=22.71 Aligned_cols=30 Identities=17% Similarity=0.367 Sum_probs=22.9
Q ss_pred hhhhhHHHHHHHHHcCCCcccccHHHHHHH
Q 013209 386 LRKISPVVRDLCKKHNMPYRSLSFFEANVW 415 (447)
Q Consensus 386 L~~~~~~v~~~~~~~g~~Y~~~~~~~~~~~ 415 (447)
|+++.-.+++.|+..|+|-...+..-++.+
T Consensus 1 yhklrlaikeicktdgipnikwgmyiafge 30 (82)
T 3fbl_A 1 YHKLRLAIKEICKTDGIPNIKWGMYIAFGE 30 (82)
T ss_dssp CHHHHHHHHHHHHHTTCCGGGHHHHHHHHH
T ss_pred ChhHHHHHHHHHccCCCCcchhHHHHHHHH
Confidence 467778899999999999776665555543
No 14
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=35.39 E-value=5.9 Score=21.06 Aligned_cols=15 Identities=33% Similarity=0.570 Sum_probs=11.0
Q ss_pred CCCCcchhhhhhccc
Q 013209 432 NPVPKNLLWEALNTH 446 (447)
Q Consensus 432 ~~~~~~~~~~~~~~~ 446 (447)
+.+-+|+||.+||+.
T Consensus 11 qdylsdhlwralna~ 25 (26)
T 2xl1_A 11 QDYLSDHLWRALNAX 25 (26)
T ss_pred HHHHHHHHHHHHhcc
Confidence 345567889999875
No 15
>2dae_A KIAA0733 protein; mitogen-activated protein kinase kinase kinase 7 interacting protein 2, MAP3K7IP2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.91 E-value=35 Score=23.96 Aligned_cols=16 Identities=44% Similarity=0.970 Sum_probs=13.1
Q ss_pred ccCccccccc---CCCCCc
Q 013209 368 GLQFQLEHHL---FPRLPR 383 (447)
Q Consensus 368 glnyHieHHl---fP~vP~ 383 (447)
-+++|+.|.| ||.||-
T Consensus 8 q~d~qvfheLkQrFPEvPd 26 (75)
T 2dae_A 8 QIDFQVLHDLRQKFPEVPE 26 (75)
T ss_dssp CCCHHHHHHHHHHSSSSCH
T ss_pred chHHHHHHHHHHhcccCcH
Confidence 3678999988 999994
Done!