Query 013210
Match_columns 447
No_of_seqs 426 out of 3402
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 01:31:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013210.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013210hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0626 MetC Cystathionine bet 100.0 2.6E-65 5.6E-70 493.5 40.7 386 38-439 5-395 (396)
2 PF01053 Cys_Met_Meta_PP: Cys/ 100.0 1.8E-63 3.9E-68 487.7 42.2 376 43-437 2-386 (386)
3 COG2873 MET17 O-acetylhomoseri 100.0 7.1E-64 1.5E-68 461.9 34.7 388 38-438 5-425 (426)
4 PLN02242 methionine gamma-lyas 100.0 1.7E-62 3.7E-67 489.5 46.7 410 29-440 5-417 (418)
5 PRK08861 cystathionine gamma-s 100.0 6.6E-61 1.4E-65 472.7 42.6 376 40-441 5-386 (388)
6 PRK08114 cystathionine beta-ly 100.0 1.1E-60 2.4E-65 468.9 42.1 379 40-439 5-394 (395)
7 PRK09028 cystathionine beta-ly 100.0 2.2E-60 4.8E-65 468.3 43.2 381 41-442 5-391 (394)
8 PRK08249 cystathionine gamma-s 100.0 2.5E-60 5.4E-65 472.0 43.9 384 40-441 8-396 (398)
9 PRK08134 O-acetylhomoserine am 100.0 6.3E-60 1.4E-64 472.1 44.7 396 34-442 2-431 (433)
10 PRK06702 O-acetylhomoserine am 100.0 4.1E-60 8.9E-65 470.0 42.7 390 38-440 4-426 (432)
11 PRK08248 O-acetylhomoserine am 100.0 2.4E-59 5.3E-64 468.2 43.7 389 39-440 7-429 (431)
12 TIGR01328 met_gam_lyase methio 100.0 4.6E-59 9.9E-64 462.7 43.9 384 40-439 3-391 (391)
13 KOG0053 Cystathionine beta-lya 100.0 1.8E-59 4E-64 446.1 38.0 383 39-440 20-408 (409)
14 PRK08133 O-succinylhomoserine 100.0 7.6E-59 1.6E-63 461.3 43.3 381 39-437 5-389 (390)
15 PRK07812 O-acetylhomoserine am 100.0 2.2E-58 4.8E-63 460.4 45.1 389 39-440 12-433 (436)
16 PRK05967 cystathionine beta-ly 100.0 9.7E-59 2.1E-63 455.7 41.6 376 37-440 9-393 (395)
17 PRK07504 O-succinylhomoserine 100.0 2.3E-58 5E-63 458.7 43.5 386 37-440 7-397 (398)
18 PRK07810 O-succinylhomoserine 100.0 3.7E-58 8E-63 457.1 43.5 381 38-436 13-402 (403)
19 PRK05613 O-acetylhomoserine am 100.0 3.3E-58 7.2E-63 459.2 43.0 390 37-439 10-437 (437)
20 PRK06084 O-acetylhomoserine am 100.0 4.7E-58 1E-62 458.5 42.9 387 41-440 3-424 (425)
21 PRK08045 cystathionine gamma-s 100.0 4.3E-58 9.4E-63 454.1 41.7 374 41-440 5-384 (386)
22 PRK05939 hypothetical protein; 100.0 1E-57 2.2E-62 452.7 43.3 371 53-438 5-396 (397)
23 PRK07049 methionine gamma-lyas 100.0 2.2E-57 4.8E-62 454.4 43.9 389 36-438 13-426 (427)
24 PRK08574 cystathionine gamma-s 100.0 1.5E-57 3.3E-62 450.5 42.1 377 41-439 3-385 (385)
25 TIGR01325 O_suc_HS_sulf O-succ 100.0 1.7E-57 3.8E-62 450.7 41.5 374 45-436 4-380 (380)
26 PRK07503 methionine gamma-lyas 100.0 5.8E-57 1.3E-61 449.3 44.3 384 40-441 9-399 (403)
27 PRK06234 methionine gamma-lyas 100.0 1.2E-56 2.5E-61 447.1 44.7 388 36-439 4-398 (400)
28 PRK06176 cystathionine gamma-s 100.0 5.8E-57 1.3E-61 445.6 40.9 372 41-439 3-379 (380)
29 PLN02509 cystathionine beta-ly 100.0 6.4E-57 1.4E-61 451.1 41.1 374 38-438 84-461 (464)
30 PRK06767 methionine gamma-lyas 100.0 1.6E-56 3.5E-61 444.7 42.9 376 40-439 5-386 (386)
31 TIGR02080 O_succ_thio_ly O-suc 100.0 1.4E-56 3E-61 443.2 41.4 372 41-438 4-381 (382)
32 cd00614 CGS_like CGS_like: Cys 100.0 4E-56 8.6E-61 440.1 42.2 364 56-437 1-369 (369)
33 PRK07671 cystathionine beta-ly 100.0 3.3E-56 7.1E-61 440.1 41.5 371 40-437 2-377 (377)
34 TIGR01326 OAH_OAS_sulfhy OAH/O 100.0 4E-56 8.7E-61 445.7 42.1 384 41-437 2-418 (418)
35 PRK05994 O-acetylhomoserine am 100.0 1.2E-55 2.6E-60 442.4 43.8 385 41-438 8-426 (427)
36 PRK08776 cystathionine gamma-s 100.0 7.3E-56 1.6E-60 440.5 41.9 374 41-440 13-392 (405)
37 PRK06460 hypothetical protein; 100.0 8.3E-56 1.8E-60 437.5 41.5 370 40-439 2-375 (376)
38 TIGR01324 cysta_beta_ly_B cyst 100.0 1.3E-55 2.7E-60 434.8 41.4 365 48-439 7-377 (377)
39 TIGR01329 cysta_beta_ly_E cyst 100.0 1.9E-55 4.1E-60 435.2 41.2 369 44-439 4-376 (378)
40 PRK07811 cystathionine gamma-s 100.0 3E-55 6.4E-60 435.3 41.6 373 38-438 10-388 (388)
41 PRK08064 cystathionine beta-ly 100.0 7.3E-55 1.6E-59 432.8 41.8 376 39-441 5-385 (390)
42 PRK07050 cystathionine beta-ly 100.0 2.7E-54 5.8E-59 428.6 42.6 377 39-439 8-392 (394)
43 PRK06434 cystathionine gamma-l 100.0 2.4E-54 5.2E-59 424.6 39.5 372 40-438 8-384 (384)
44 PRK05968 hypothetical protein; 100.0 8.9E-53 1.9E-57 417.7 42.5 375 42-440 10-388 (389)
45 PRK07269 cystathionine gamma-s 100.0 7.8E-53 1.7E-57 413.5 38.9 354 39-437 5-363 (364)
46 PRK08247 cystathionine gamma-s 100.0 1.6E-50 3.5E-55 399.2 39.9 356 41-439 5-365 (366)
47 PRK07582 cystathionine gamma-l 100.0 1.3E-50 2.7E-55 399.4 38.9 357 42-439 5-366 (366)
48 COG1104 NifS Cysteine sulfinat 100.0 2.4E-50 5.3E-55 383.3 27.1 342 63-440 7-375 (386)
49 KOG1549 Cysteine desulfurase N 100.0 1.8E-35 3.9E-40 282.4 23.9 338 64-440 50-416 (428)
50 TIGR03403 nifS_epsilon cystein 100.0 5.7E-33 1.2E-37 276.9 27.7 342 63-440 5-373 (382)
51 COG0520 csdA Selenocysteine ly 100.0 2.9E-32 6.2E-37 269.5 30.6 336 64-441 29-404 (405)
52 PRK02948 cysteine desulfurase; 100.0 1.2E-32 2.6E-37 274.5 27.1 344 64-441 7-373 (381)
53 PRK09295 bifunctional cysteine 100.0 2.7E-32 5.8E-37 274.1 29.5 334 64-441 30-403 (406)
54 PLN02651 cysteine desulfurase 100.0 3.3E-32 7.1E-37 269.5 25.7 330 64-430 6-364 (364)
55 PRK10874 cysteine sulfinate de 100.0 1.5E-31 3.2E-36 268.4 29.3 331 65-440 27-396 (401)
56 TIGR03392 FeS_syn_CsdA cystein 100.0 3E-31 6.4E-36 266.0 29.8 332 64-440 23-393 (398)
57 TIGR03402 FeS_nifS cysteine de 100.0 2.4E-31 5.1E-36 265.0 28.9 339 64-440 6-370 (379)
58 TIGR02006 IscS cysteine desulf 100.0 2.9E-31 6.2E-36 266.1 27.7 339 64-440 10-375 (402)
59 COG0436 Aspartate/tyrosine/aro 100.0 1.3E-30 2.9E-35 258.0 31.6 272 101-424 67-375 (393)
60 PLN02855 Bifunctional selenocy 100.0 3.8E-30 8.2E-35 259.9 29.7 338 66-441 41-417 (424)
61 TIGR01979 sufS cysteine desulf 100.0 9.2E-30 2E-34 255.7 29.8 334 67-441 28-400 (403)
62 cd06453 SufS_like Cysteine des 100.0 1.7E-29 3.8E-34 251.1 26.7 330 64-436 6-373 (373)
63 PRK07681 aspartate aminotransf 100.0 1.1E-28 2.3E-33 247.4 30.5 244 101-371 71-344 (399)
64 PF00266 Aminotran_5: Aminotra 100.0 3.1E-29 6.7E-34 249.0 26.2 328 64-432 6-371 (371)
65 PRK07179 hypothetical protein; 100.0 3.4E-28 7.4E-33 244.4 33.3 311 74-444 75-400 (407)
66 PRK07324 transaminase; Validat 100.0 2.7E-28 5.9E-33 242.0 32.0 242 102-370 65-327 (373)
67 TIGR03235 DNA_S_dndA cysteine 100.0 2.8E-29 6E-34 247.7 24.6 320 64-419 5-353 (353)
68 PRK05957 aspartate aminotransf 100.0 4.8E-28 1E-32 241.8 33.7 288 98-438 68-385 (389)
69 PRK06290 aspartate aminotransf 100.0 2.5E-28 5.5E-33 244.6 30.8 284 100-439 82-406 (410)
70 PRK06207 aspartate aminotransf 100.0 4.3E-28 9.2E-33 243.1 32.0 242 102-370 85-357 (405)
71 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 4.9E-28 1.1E-32 241.4 31.9 258 61-326 25-306 (387)
72 PRK12414 putative aminotransfe 100.0 7.2E-28 1.6E-32 240.1 32.4 219 99-325 70-312 (384)
73 PLN03026 histidinol-phosphate 100.0 3E-28 6.4E-33 242.2 29.3 282 97-438 84-378 (380)
74 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 7E-28 1.5E-32 238.9 31.8 292 56-371 7-329 (370)
75 KOG0257 Kynurenine aminotransf 100.0 9.5E-29 2.1E-33 233.4 24.0 232 89-328 61-334 (420)
76 TIGR01976 am_tr_V_VC1184 cyste 100.0 2.5E-28 5.5E-33 244.8 28.5 330 66-436 26-397 (397)
77 TIGR01822 2am3keto_CoA 2-amino 100.0 1.4E-27 2.9E-32 239.2 33.7 311 74-441 59-388 (393)
78 PRK14012 cysteine desulfurase; 100.0 2.2E-28 4.8E-33 245.5 27.2 339 64-440 10-377 (404)
79 PRK06425 histidinol-phosphate 100.0 5.9E-28 1.3E-32 236.0 27.5 282 93-439 34-330 (332)
80 PLN00175 aminotransferase fami 100.0 1.3E-27 2.9E-32 239.9 30.6 242 102-370 94-365 (413)
81 TIGR03540 DapC_direct LL-diami 100.0 1.1E-27 2.5E-32 238.8 29.5 282 102-440 70-381 (383)
82 PRK06108 aspartate aminotransf 100.0 2.5E-27 5.4E-32 236.3 31.7 242 102-370 64-337 (382)
83 PRK04781 histidinol-phosphate 100.0 3.7E-27 8.1E-32 233.1 31.6 287 93-440 53-361 (364)
84 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 3.1E-27 6.6E-32 233.8 31.0 251 67-325 11-286 (361)
85 COG0079 HisC Histidinol-phosph 100.0 1.8E-27 3.9E-32 231.7 28.5 289 92-440 50-352 (356)
86 PRK08960 hypothetical protein; 100.0 5E-27 1.1E-31 234.4 32.4 242 101-369 71-340 (387)
87 PRK14807 histidinol-phosphate 100.0 4.4E-27 9.4E-32 231.7 31.5 241 98-371 58-311 (351)
88 PRK01533 histidinol-phosphate 100.0 5.5E-28 1.2E-32 238.9 25.1 276 98-439 63-356 (366)
89 PRK07682 hypothetical protein; 100.0 1.9E-27 4.1E-32 236.8 29.1 244 100-370 58-331 (378)
90 PRK02731 histidinol-phosphate 100.0 1.5E-27 3.2E-32 236.7 28.0 278 101-439 69-363 (367)
91 PRK03158 histidinol-phosphate 100.0 2E-27 4.3E-32 235.0 28.5 277 99-438 64-357 (359)
92 PRK15481 transcriptional regul 100.0 4.2E-27 9E-32 238.2 31.1 248 102-383 124-394 (431)
93 PRK09082 methionine aminotrans 100.0 1.8E-27 3.8E-32 237.5 27.7 242 101-369 73-341 (386)
94 PRK07366 succinyldiaminopimela 100.0 5E-27 1.1E-31 234.6 30.2 240 102-369 71-344 (388)
95 PRK08068 transaminase; Reviewe 100.0 4.3E-27 9.3E-32 235.1 29.1 282 101-440 72-384 (389)
96 PLN02187 rooty/superroot1 100.0 8.1E-27 1.8E-31 236.8 31.4 216 100-322 109-359 (462)
97 PRK09276 LL-diaminopimelate am 100.0 4.4E-27 9.5E-32 234.8 29.0 243 101-370 71-343 (385)
98 TIGR03537 DapC succinyldiamino 100.0 1.2E-26 2.6E-31 228.6 31.6 242 102-371 39-310 (350)
99 TIGR01977 am_tr_V_EF2568 cyste 100.0 2.8E-27 6.1E-32 235.5 27.0 303 99-438 44-375 (376)
100 PRK08153 histidinol-phosphate 100.0 6.7E-27 1.5E-31 231.8 29.4 283 101-439 69-366 (369)
101 PRK09105 putative aminotransfe 100.0 6.3E-27 1.4E-31 231.8 28.5 275 99-439 78-367 (370)
102 TIGR01141 hisC histidinol-phos 100.0 8.7E-27 1.9E-31 229.3 28.8 277 98-436 53-345 (346)
103 PRK06225 aspartate aminotransf 100.0 2E-26 4.3E-31 229.6 31.6 287 101-440 68-378 (380)
104 PRK05942 aspartate aminotransf 100.0 2.1E-26 4.6E-31 230.4 31.5 282 102-441 76-388 (394)
105 PRK01688 histidinol-phosphate 100.0 3.7E-27 8.1E-32 232.1 25.6 281 93-436 51-350 (351)
106 PRK02610 histidinol-phosphate 100.0 1.5E-26 3.3E-31 229.7 30.0 244 99-371 66-336 (374)
107 PRK08912 hypothetical protein; 100.0 1.2E-26 2.7E-31 231.6 29.3 241 102-369 66-338 (387)
108 PRK07777 aminotransferase; Val 100.0 3.1E-26 6.7E-31 228.8 32.0 253 101-383 63-348 (387)
109 PRK05764 aspartate aminotransf 100.0 2.6E-26 5.6E-31 229.9 31.5 217 101-325 70-317 (393)
110 PRK05387 histidinol-phosphate 100.0 9.6E-27 2.1E-31 229.6 27.9 240 100-371 61-313 (353)
111 cd06454 KBL_like KBL_like; thi 100.0 3.4E-26 7.4E-31 225.3 31.8 310 74-439 22-348 (349)
112 PRK04870 histidinol-phosphate 100.0 1.3E-26 2.9E-31 228.8 28.7 278 99-438 63-354 (356)
113 TIGR01264 tyr_amTase_E tyrosin 100.0 2.4E-26 5.1E-31 230.6 30.4 229 101-357 75-338 (401)
114 PTZ00433 tyrosine aminotransfe 100.0 1.6E-26 3.5E-31 232.4 29.1 242 101-370 77-365 (412)
115 PRK07683 aminotransferase A; V 100.0 6.2E-26 1.3E-30 226.4 33.0 217 101-325 67-311 (387)
116 PRK08361 aspartate aminotransf 100.0 1.8E-26 4E-31 230.6 29.2 243 101-370 72-345 (391)
117 TIGR00858 bioF 8-amino-7-oxono 100.0 6E-26 1.3E-30 224.4 32.4 285 98-436 60-359 (360)
118 PRK03317 histidinol-phosphate 100.0 1.3E-26 2.7E-31 230.0 27.3 219 98-325 64-303 (368)
119 PRK09147 succinyldiaminopimela 100.0 2.9E-26 6.2E-31 229.7 30.1 238 102-369 68-344 (396)
120 PRK09148 aminotransferase; Val 100.0 2.7E-26 5.8E-31 230.2 29.8 242 102-369 71-344 (405)
121 PLN00145 tyrosine/nicotianamin 100.0 5.7E-26 1.2E-30 229.0 32.1 213 101-320 96-343 (430)
122 PRK05664 threonine-phosphate d 100.0 3.5E-26 7.7E-31 223.2 29.6 268 102-441 52-327 (330)
123 PRK07309 aromatic amino acid a 100.0 1.1E-25 2.3E-30 225.0 33.1 220 101-327 69-317 (391)
124 PRK06348 aspartate aminotransf 100.0 4.7E-26 1E-30 227.1 30.3 242 102-370 69-340 (384)
125 PRK00950 histidinol-phosphate 100.0 1.1E-26 2.4E-31 229.9 25.2 278 99-439 69-359 (361)
126 PRK05166 histidinol-phosphate 100.0 4.3E-26 9.3E-31 226.4 29.4 275 102-439 74-368 (371)
127 COG1167 ARO8 Transcriptional r 100.0 5.5E-26 1.2E-30 230.0 30.6 287 102-439 135-453 (459)
128 TIGR01265 tyr_nico_aTase tyros 100.0 7.2E-26 1.6E-30 227.2 31.0 243 99-369 73-357 (403)
129 PRK07337 aminotransferase; Val 100.0 1.4E-25 3E-30 224.2 32.4 283 101-440 69-384 (388)
130 PLN02656 tyrosine transaminase 100.0 6.1E-26 1.3E-30 228.0 30.0 212 101-321 75-323 (409)
131 PRK05958 8-amino-7-oxononanoat 100.0 2.5E-25 5.5E-30 222.1 34.3 311 74-439 60-384 (385)
132 PRK04635 histidinol-phosphate 100.0 3.2E-26 6.8E-31 225.9 26.8 278 95-438 56-351 (354)
133 PLN00143 tyrosine/nicotianamin 100.0 8.4E-26 1.8E-30 226.9 30.3 230 102-357 77-343 (409)
134 PLN02483 serine palmitoyltrans 100.0 2.4E-25 5.2E-30 227.1 34.0 292 98-444 145-468 (489)
135 PRK03321 putative aminotransfe 100.0 2.3E-26 4.9E-31 226.9 25.4 241 99-371 57-315 (352)
136 TIGR03538 DapC_gpp succinyldia 100.0 8.1E-26 1.8E-30 226.2 29.7 249 102-383 67-354 (393)
137 PRK13355 bifunctional HTH-doma 100.0 1E-25 2.3E-30 232.5 31.3 216 101-325 187-439 (517)
138 PRK06107 aspartate aminotransf 100.0 1.5E-25 3.2E-30 224.8 31.2 212 101-320 76-314 (402)
139 PRK07550 hypothetical protein; 100.0 1.8E-25 3.8E-30 223.2 31.3 284 101-438 69-383 (386)
140 PRK08056 threonine-phosphate d 100.0 8.7E-26 1.9E-30 222.9 28.7 277 100-439 56-352 (356)
141 COG1168 MalY Bifunctional PLP- 100.0 3.6E-25 7.9E-30 207.2 30.7 294 91-439 56-387 (388)
142 TIGR01140 L_thr_O3P_dcar L-thr 99.9 1.3E-25 2.9E-30 219.2 29.1 277 93-436 41-329 (330)
143 PRK07568 aspartate aminotransf 99.9 1.9E-25 4.2E-30 223.9 30.7 240 101-369 68-338 (397)
144 PLN03227 serine palmitoyltrans 99.9 3.4E-25 7.4E-30 220.6 31.8 302 92-440 38-380 (392)
145 PTZ00377 alanine aminotransfer 99.9 1.8E-25 4E-30 228.8 30.6 219 101-327 117-393 (481)
146 PRK08636 aspartate aminotransf 99.9 4.2E-25 9.1E-30 221.6 32.6 242 102-369 74-354 (403)
147 cd06451 AGAT_like Alanine-glyo 99.9 7.6E-26 1.7E-30 223.5 26.8 293 98-439 31-354 (356)
148 PRK13392 5-aminolevulinate syn 99.9 2.8E-25 6E-30 223.5 31.2 290 100-442 92-397 (410)
149 PRK06358 threonine-phosphate d 99.9 1.6E-25 3.5E-30 220.7 28.9 276 98-434 53-351 (354)
150 PRK08363 alanine aminotransfer 99.9 2.7E-25 5.9E-30 222.7 30.8 215 100-321 71-316 (398)
151 PRK08175 aminotransferase; Val 99.9 3.5E-25 7.5E-30 221.7 30.9 244 101-370 69-344 (395)
152 PRK09265 aminotransferase AlaT 99.9 4.1E-25 8.9E-30 221.8 31.4 229 102-358 75-340 (404)
153 PLN02607 1-aminocyclopropane-1 99.9 5.3E-25 1.1E-29 222.3 32.3 288 101-440 97-439 (447)
154 PRK06959 putative threonine-ph 99.9 2.3E-25 5.1E-30 218.0 28.1 235 95-371 50-295 (339)
155 PRK06836 aspartate aminotransf 99.9 7.1E-25 1.5E-29 219.3 32.0 241 100-371 74-350 (394)
156 PRK13393 5-aminolevulinate syn 99.9 8E-25 1.7E-29 219.8 32.4 288 98-440 89-394 (406)
157 TIGR01821 5aminolev_synth 5-am 99.9 8.6E-25 1.9E-29 219.4 32.5 291 98-441 89-395 (402)
158 PLN02450 1-aminocyclopropane-1 99.9 1E-24 2.3E-29 221.8 33.0 286 102-439 89-431 (468)
159 PLN02376 1-aminocyclopropane-1 99.9 5.6E-25 1.2E-29 224.6 31.1 284 102-437 97-437 (496)
160 PLN02724 Molybdenum cofactor s 99.9 2.2E-25 4.7E-30 240.0 28.8 348 64-439 41-485 (805)
161 PRK14809 histidinol-phosphate 99.9 2.6E-25 5.7E-30 219.7 27.0 235 100-371 66-317 (357)
162 PRK14808 histidinol-phosphate 99.9 7.4E-25 1.6E-29 214.2 29.2 237 98-371 55-302 (335)
163 PRK07908 hypothetical protein; 99.9 4.1E-24 8.9E-29 210.5 34.1 270 100-435 59-344 (349)
164 PRK03967 histidinol-phosphate 99.9 5.6E-25 1.2E-29 215.4 26.8 209 98-320 54-274 (337)
165 PRK13520 L-tyrosine decarboxyl 99.9 1.3E-24 2.9E-29 215.8 29.7 311 65-440 28-369 (371)
166 PRK09064 5-aminolevulinate syn 99.9 3.6E-24 7.7E-29 215.3 33.0 291 97-442 89-397 (407)
167 PRK07590 L,L-diaminopimelate a 99.9 5.8E-25 1.2E-29 221.1 27.0 245 100-370 77-366 (409)
168 PRK06855 aminotransferase; Val 99.9 3.8E-24 8.2E-29 216.2 32.4 230 102-358 76-345 (433)
169 PLN02721 threonine aldolase 99.9 1.4E-24 3E-29 214.2 28.5 285 97-440 38-350 (353)
170 COG0156 BioF 7-keto-8-aminopel 99.9 4.1E-24 8.8E-29 207.7 30.9 308 74-439 60-387 (388)
171 PRK07392 threonine-phosphate d 99.9 2E-24 4.4E-29 213.6 29.4 276 100-439 58-356 (360)
172 TIGR01825 gly_Cac_T_rel pyrido 99.9 5.6E-24 1.2E-28 212.4 32.6 295 91-439 70-378 (385)
173 PRK07865 N-succinyldiaminopime 99.9 1.3E-24 2.8E-29 215.3 27.8 236 102-371 65-325 (364)
174 PF00155 Aminotran_1_2: Aminot 99.9 8.4E-25 1.8E-29 216.6 25.4 242 101-371 46-326 (363)
175 PRK05839 hypothetical protein; 99.9 2.9E-24 6.2E-29 213.4 28.8 233 102-370 63-327 (374)
176 TIGR03539 DapC_actino succinyl 99.9 4.1E-24 9E-29 211.0 29.0 236 102-371 59-319 (357)
177 TIGR02326 transamin_PhnW 2-ami 99.9 6.9E-24 1.5E-28 210.1 30.4 291 98-439 34-359 (363)
178 PTZ00094 serine hydroxymethylt 99.9 1.5E-24 3.3E-29 220.0 26.2 337 59-441 36-407 (452)
179 TIGR01814 kynureninase kynuren 99.9 1.5E-24 3.2E-29 217.9 25.5 318 64-439 34-404 (406)
180 PRK05937 8-amino-7-oxononanoat 99.9 9.2E-24 2E-28 209.4 30.3 307 67-441 21-349 (370)
181 PRK06939 2-amino-3-ketobutyrat 99.9 2E-23 4.2E-28 209.3 32.8 288 98-440 86-391 (397)
182 PRK13479 2-aminoethylphosphona 99.9 1.5E-23 3.2E-28 208.2 31.3 292 99-441 37-362 (368)
183 PLN02409 serine--glyoxylate am 99.9 5.6E-24 1.2E-28 213.0 28.0 295 97-438 40-368 (401)
184 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2E-23 4.3E-28 207.5 31.1 311 64-439 27-373 (373)
185 PLN02955 8-amino-7-oxononanoat 99.9 2.7E-23 5.8E-28 206.5 31.7 286 99-442 147-461 (476)
186 cd06502 TA_like Low-specificit 99.9 8.3E-24 1.8E-28 207.4 28.0 286 97-438 30-337 (338)
187 PLN02231 alanine transaminase 99.9 2.3E-23 5E-28 213.9 32.2 228 90-327 161-445 (534)
188 TIGR03542 DAPAT_plant LL-diami 99.9 1.6E-23 3.5E-28 210.1 30.4 244 99-370 75-359 (402)
189 PLN02822 serine palmitoyltrans 99.9 3.6E-23 7.7E-28 210.7 32.7 292 97-440 152-475 (481)
190 PLN02368 alanine transaminase 99.9 8.1E-24 1.8E-28 211.0 27.2 218 102-327 110-385 (407)
191 PLN03032 serine decarboxylase; 99.9 9.1E-24 2E-28 206.7 26.5 244 72-324 39-318 (374)
192 cd00609 AAT_like Aspartate ami 99.9 7.8E-23 1.7E-27 200.9 33.4 288 96-437 33-349 (350)
193 PRK09440 avtA valine--pyruvate 99.9 3.2E-23 6.9E-28 209.1 29.8 294 102-439 77-412 (416)
194 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 2.8E-23 6.1E-28 204.9 28.7 289 99-439 31-354 (355)
195 PRK08354 putative aminotransfe 99.9 3E-23 6.5E-28 200.9 28.1 159 101-273 42-205 (311)
196 TIGR01788 Glu-decarb-GAD gluta 99.9 4.4E-23 9.5E-28 206.0 29.0 275 66-371 50-383 (431)
197 cd00613 GDC-P Glycine cleavage 99.9 4.8E-23 1E-27 206.6 29.0 287 99-436 64-398 (398)
198 PRK09275 aspartate aminotransf 99.9 2.1E-23 4.5E-28 211.6 26.5 144 116-264 163-328 (527)
199 PRK08637 hypothetical protein; 99.9 1.4E-22 3E-27 202.4 32.0 254 90-370 37-346 (388)
200 KOG0259 Tyrosine aminotransfer 99.9 1.2E-22 2.6E-27 189.0 28.7 214 99-322 103-354 (447)
201 PRK00854 rocD ornithine--oxo-a 99.9 6.2E-23 1.4E-27 205.9 29.2 287 97-439 81-398 (401)
202 cd00378 SHMT Serine-glycine hy 99.9 3.1E-23 6.6E-28 208.3 26.9 332 59-439 21-382 (402)
203 PTZ00376 aspartate aminotransf 99.9 1.1E-22 2.4E-27 204.1 29.8 221 91-321 66-338 (404)
204 TIGR01437 selA_rel uncharacter 99.9 4.8E-23 1E-27 203.2 26.6 296 97-439 43-362 (363)
205 cd00616 AHBA_syn 3-amino-5-hyd 99.9 7.5E-23 1.6E-27 201.8 27.4 303 98-437 17-352 (352)
206 KOG1368 Threonine aldolase [Am 99.9 2.5E-23 5.4E-28 187.4 21.1 310 63-437 26-363 (384)
207 PRK03244 argD acetylornithine 99.9 7.6E-23 1.6E-27 205.1 27.2 289 95-440 81-392 (398)
208 PRK09257 aromatic amino acid a 99.9 9.9E-23 2.1E-27 204.1 27.9 214 101-321 71-333 (396)
209 PRK02769 histidine decarboxyla 99.9 7.6E-23 1.6E-27 201.7 26.2 246 71-325 37-316 (380)
210 PLN02672 methionine S-methyltr 99.9 1.4E-22 2.9E-27 217.7 30.1 217 101-327 736-996 (1082)
211 PRK04073 rocD ornithine--oxo-a 99.9 6.5E-23 1.4E-27 205.2 25.8 286 97-439 80-394 (396)
212 PRK10534 L-threonine aldolase; 99.9 2E-22 4.4E-27 197.2 27.9 276 97-439 32-330 (333)
213 TIGR03801 asp_4_decarbox aspar 99.9 1.4E-22 3E-27 205.3 27.3 144 116-264 157-327 (521)
214 PRK13034 serine hydroxymethylt 99.9 1.9E-22 4.2E-27 202.3 27.8 349 36-439 9-389 (416)
215 TIGR03576 pyridox_MJ0158 pyrid 99.9 4.1E-22 8.8E-27 194.9 28.6 206 98-319 53-272 (346)
216 PRK00011 glyA serine hydroxyme 99.9 2.7E-22 5.8E-27 202.3 28.1 284 61-371 29-336 (416)
217 cd00610 OAT_like Acetyl ornith 99.9 1E-22 2.3E-27 205.2 24.7 292 97-439 77-412 (413)
218 TIGR00707 argD acetylornithine 99.9 5E-22 1.1E-26 198.0 27.1 286 96-438 66-377 (379)
219 TIGR00474 selA seryl-tRNA(sec) 99.9 1.1E-22 2.3E-27 203.9 22.1 247 65-320 89-371 (454)
220 PRK11658 UDP-4-amino-4-deoxy-L 99.9 3E-21 6.6E-26 191.7 32.0 306 98-439 32-376 (379)
221 cd06450 DOPA_deC_like DOPA dec 99.9 2.3E-22 5.1E-27 197.7 23.0 273 88-438 27-344 (345)
222 PRK13238 tnaA tryptophanase/L- 99.9 1.4E-21 3.1E-26 197.4 28.4 305 91-440 72-431 (460)
223 COG4992 ArgD Ornithine/acetylo 99.9 1.3E-22 2.9E-27 193.4 19.7 291 96-440 81-400 (404)
224 PLN02397 aspartate transaminas 99.9 4E-21 8.6E-26 193.6 31.1 221 91-321 85-356 (423)
225 PRK02627 acetylornithine amino 99.9 5E-22 1.1E-26 199.1 23.8 290 96-439 78-391 (396)
226 PRK01278 argD acetylornithine 99.9 8.7E-22 1.9E-26 196.8 24.1 289 97-438 71-384 (389)
227 TIGR03588 PseC UDP-4-keto-6-de 99.9 8E-21 1.7E-25 189.2 30.6 306 98-439 28-379 (380)
228 TIGR02379 ECA_wecE TDP-4-keto- 99.9 7E-21 1.5E-25 188.4 29.5 309 98-439 30-374 (376)
229 TIGR03246 arg_catab_astC succi 99.9 2E-21 4.4E-26 194.3 25.9 291 97-439 75-392 (397)
230 PRK05093 argD bifunctional N-s 99.9 2.7E-21 5.9E-26 194.0 25.1 289 98-439 81-397 (403)
231 PRK04311 selenocysteine syntha 99.9 1.6E-21 3.5E-26 196.0 23.1 239 74-321 104-377 (464)
232 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 5.5E-20 1.2E-24 182.7 32.4 309 98-439 30-373 (375)
233 PTZ00125 ornithine aminotransf 99.9 6.1E-21 1.3E-25 191.5 25.9 254 98-371 72-356 (400)
234 PRK00451 glycine dehydrogenase 99.9 9E-21 1.9E-25 192.9 26.9 291 99-439 112-445 (447)
235 COG2008 GLY1 Threonine aldolas 99.9 3E-20 6.5E-25 174.0 27.0 311 63-440 4-341 (342)
236 KOG0256 1-aminocyclopropane-1- 99.9 6E-20 1.3E-24 172.6 28.3 227 102-357 124-396 (471)
237 COG0399 WecE Predicted pyridox 99.9 4.2E-20 9.2E-25 178.3 28.1 323 73-440 18-371 (374)
238 PRK12381 bifunctional succinyl 99.9 1.5E-20 3.3E-25 188.6 25.5 254 97-371 79-360 (406)
239 cd00617 Tnase_like Tryptophana 99.9 3E-20 6.6E-25 185.3 26.9 220 98-328 52-318 (431)
240 PRK02936 argD acetylornithine 99.9 3.6E-20 7.7E-25 184.5 27.5 283 98-438 70-375 (377)
241 PRK07505 hypothetical protein; 99.9 1.9E-19 4.1E-24 180.6 32.5 312 70-441 62-398 (402)
242 PF01041 DegT_DnrJ_EryC1: DegT 99.9 8.6E-20 1.9E-24 180.4 26.8 306 98-437 24-363 (363)
243 TIGR01885 Orn_aminotrans ornit 99.9 1E-19 2.3E-24 182.5 27.6 289 97-439 77-399 (401)
244 PRK13580 serine hydroxymethylt 99.9 4.1E-19 8.8E-24 176.9 28.5 350 36-439 30-442 (493)
245 COG0001 HemL Glutamate-1-semia 99.9 4.7E-20 1E-24 177.9 20.9 246 91-358 86-365 (432)
246 cd00615 Orn_deC_like Ornithine 99.9 1.2E-20 2.6E-25 181.2 17.0 159 97-263 57-235 (294)
247 PLN02624 ornithine-delta-amino 99.9 2.9E-19 6.3E-24 181.9 27.3 290 96-439 114-441 (474)
248 cd00611 PSAT_like Phosphoserin 99.9 9.6E-20 2.1E-24 179.5 22.9 314 64-440 5-354 (355)
249 PRK04366 glycine dehydrogenase 99.8 4E-19 8.6E-24 181.4 26.5 288 99-440 113-446 (481)
250 PRK15407 lipopolysaccharide bi 99.8 2.7E-18 5.9E-23 172.8 30.3 211 98-321 62-329 (438)
251 KOG0634 Aromatic amino acid am 99.8 2.1E-18 4.5E-23 163.6 27.2 301 91-440 94-465 (472)
252 PLN02414 glycine dehydrogenase 99.8 3.8E-19 8.2E-24 190.9 25.2 294 99-441 568-906 (993)
253 PRK03080 phosphoserine aminotr 99.8 1.1E-18 2.5E-23 173.3 26.7 284 97-440 46-371 (378)
254 PLN00144 acetylornithine trans 99.8 3.6E-19 7.8E-24 176.8 23.1 253 98-371 56-340 (382)
255 KOG1360 5-aminolevulinate synt 99.8 1.3E-18 2.8E-23 162.7 25.1 325 62-440 175-522 (570)
256 COG0075 Serine-pyruvate aminot 99.8 4.5E-18 9.7E-23 164.1 29.7 225 97-326 36-290 (383)
257 KOG1359 Glycine C-acetyltransf 99.8 2.9E-19 6.3E-24 160.9 19.8 310 74-441 88-411 (417)
258 PRK05355 3-phosphoserine/phosp 99.8 9.7E-19 2.1E-23 172.1 25.2 281 99-441 48-357 (360)
259 PRK04612 argD acetylornithine 99.8 9.5E-19 2.1E-23 174.8 25.1 256 97-371 80-364 (408)
260 PRK04260 acetylornithine amino 99.8 1.1E-18 2.3E-23 173.7 25.3 277 102-438 69-373 (375)
261 TIGR01364 serC_1 phosphoserine 99.8 3.2E-18 7E-23 167.6 27.3 306 74-441 9-347 (349)
262 TIGR00713 hemL glutamate-1-sem 99.8 1.4E-18 3E-23 175.5 23.5 222 97-322 86-342 (423)
263 PRK08117 4-aminobutyrate amino 99.8 4E-18 8.7E-23 172.4 25.4 257 96-371 83-388 (433)
264 TIGR03372 putres_am_tran putre 99.8 4.5E-18 9.7E-23 170.8 25.4 292 97-438 115-440 (442)
265 KOG0633 Histidinol phosphate a 99.8 2.5E-18 5.5E-23 152.5 20.6 271 113-434 85-373 (375)
266 PRK03715 argD acetylornithine 99.8 3.1E-18 6.7E-23 170.7 23.7 289 98-440 77-391 (395)
267 PRK11522 putrescine--2-oxoglut 99.8 5.1E-18 1.1E-22 171.5 25.3 257 97-371 122-410 (459)
268 cd01494 AAT_I Aspartate aminot 99.8 1E-18 2.2E-23 153.2 17.1 154 101-262 2-170 (170)
269 PRK05964 adenosylmethionine--8 99.8 1.2E-17 2.6E-22 168.5 26.2 292 96-440 82-420 (423)
270 PRK09792 4-aminobutyrate trans 99.8 9.7E-18 2.1E-22 168.6 25.5 294 95-439 79-418 (421)
271 COG0160 GabT 4-aminobutyrate a 99.8 4.5E-18 9.8E-23 167.3 21.5 288 99-438 99-445 (447)
272 PRK06777 4-aminobutyrate amino 99.8 1.5E-17 3.3E-22 167.2 24.5 219 96-320 80-337 (421)
273 TIGR01366 serC_3 phosphoserine 99.8 1.1E-17 2.3E-22 165.0 22.9 288 98-440 40-358 (361)
274 TIGR00700 GABAtrnsam 4-aminobu 99.8 6.5E-17 1.4E-21 162.9 29.0 255 96-371 73-379 (420)
275 PLN03226 serine hydroxymethylt 99.8 7.1E-17 1.5E-21 163.7 29.2 281 36-328 15-341 (475)
276 PRK08360 4-aminobutyrate amino 99.8 2.2E-17 4.7E-22 166.7 25.0 253 98-371 83-387 (443)
277 PF01212 Beta_elim_lyase: Beta 99.8 3.8E-19 8.2E-24 168.6 11.5 225 92-327 24-277 (290)
278 TIGR03531 selenium_SpcS O-phos 99.8 8.8E-17 1.9E-21 160.2 28.8 209 100-320 106-344 (444)
279 COG1103 Archaea-specific pyrid 99.8 1.6E-16 3.4E-21 141.9 26.7 219 97-322 59-300 (382)
280 PLN02271 serine hydroxymethylt 99.8 2E-16 4.2E-21 158.4 29.3 286 60-371 151-491 (586)
281 TIGR02407 ectoine_ectB diamino 99.8 2.7E-17 5.9E-22 164.9 23.3 293 97-439 76-409 (412)
282 PRK08088 4-aminobutyrate amino 99.8 1.6E-16 3.4E-21 160.4 28.7 289 98-439 83-420 (425)
283 PRK09264 diaminobutyrate--2-ox 99.8 1.1E-16 2.3E-21 161.4 25.9 256 97-371 80-375 (425)
284 TIGR02618 tyr_phenol_ly tyrosi 99.8 1.5E-16 3.3E-21 156.4 26.2 300 97-439 69-423 (450)
285 PRK07495 4-aminobutyrate amino 99.8 4.2E-17 9E-22 163.9 22.1 298 95-440 79-423 (425)
286 PRK08593 4-aminobutyrate amino 99.8 1.2E-16 2.6E-21 161.6 25.3 255 96-371 82-390 (445)
287 PLN02760 4-aminobutyrate:pyruv 99.8 4.4E-17 9.5E-22 166.4 22.2 241 97-357 131-428 (504)
288 PRK06058 4-aminobutyrate amino 99.8 1.2E-16 2.7E-21 161.7 24.7 293 96-439 96-439 (443)
289 PRK04013 argD acetylornithine/ 99.8 6.3E-17 1.4E-21 158.8 21.8 163 96-265 63-247 (364)
290 PRK07046 aminotransferase; Val 99.8 1.2E-16 2.6E-21 161.4 24.5 218 97-319 113-363 (453)
291 PRK05769 4-aminobutyrate amino 99.8 1.9E-16 4E-21 159.9 25.6 287 96-439 94-436 (441)
292 PRK00062 glutamate-1-semialdeh 99.8 4.2E-17 9.1E-22 164.5 20.9 253 97-371 88-387 (426)
293 PF06838 Met_gamma_lyase: Meth 99.8 2.9E-16 6.3E-21 147.0 24.2 254 98-371 53-332 (403)
294 PRK06918 4-aminobutyrate amino 99.8 5.1E-16 1.1E-20 157.6 28.1 252 97-371 95-402 (451)
295 PRK06105 aminotransferase; Pro 99.8 1.9E-16 4.1E-21 160.6 24.0 243 95-357 88-386 (460)
296 PRK12403 putative aminotransfe 99.7 2.2E-16 4.7E-21 160.2 23.8 242 97-357 96-389 (460)
297 PRK07678 aminotransferase; Val 99.7 3.7E-16 8.1E-21 158.2 24.8 297 96-439 86-446 (451)
298 PRK06062 hypothetical protein; 99.7 3.7E-16 8.1E-21 158.1 23.9 244 95-357 91-379 (451)
299 PLN02482 glutamate-1-semialdeh 99.7 2.2E-16 4.9E-21 159.8 22.1 219 97-320 137-387 (474)
300 PLN02263 serine decarboxylase 99.7 2.7E-15 6E-20 149.3 29.2 222 97-325 131-386 (470)
301 KOG1357 Serine palmitoyltransf 99.7 2.9E-17 6.3E-22 156.3 13.7 287 99-440 182-500 (519)
302 PRK07482 hypothetical protein; 99.7 2.8E-16 6.1E-21 159.4 21.9 241 96-357 91-389 (461)
303 PLN02880 tyrosine decarboxylas 99.7 1.7E-15 3.7E-20 154.4 27.5 285 102-440 125-482 (490)
304 PRK06541 hypothetical protein; 99.7 5.5E-16 1.2E-20 157.1 23.6 239 96-357 92-386 (460)
305 PRK06082 4-aminobutyrate amino 99.7 6.5E-16 1.4E-20 156.6 24.1 294 95-441 109-454 (459)
306 PRK07481 hypothetical protein; 99.7 1.9E-15 4.1E-20 153.0 27.4 240 97-357 84-382 (449)
307 COG0112 GlyA Glycine/serine hy 99.7 2.5E-15 5.4E-20 141.9 26.0 285 60-371 29-340 (413)
308 PRK12389 glutamate-1-semialdeh 99.7 7E-16 1.5E-20 155.5 24.0 218 97-319 91-340 (428)
309 PRK05965 hypothetical protein; 99.7 1E-15 2.2E-20 155.2 25.3 296 97-444 88-453 (459)
310 PRK09221 beta alanine--pyruvat 99.7 9.2E-16 2E-20 155.0 23.5 288 97-439 90-440 (445)
311 TIGR00461 gcvP glycine dehydro 99.7 1.6E-15 3.4E-20 161.4 26.1 220 99-328 530-792 (939)
312 PRK13360 omega amino acid--pyr 99.7 1.8E-15 3.9E-20 152.8 25.5 288 97-439 87-437 (442)
313 PRK05639 4-aminobutyrate amino 99.7 3.1E-15 6.7E-20 151.4 26.7 252 98-371 95-402 (457)
314 PRK07986 adenosylmethionine--8 99.7 1.5E-15 3.2E-20 152.5 23.6 290 96-439 83-420 (428)
315 PRK13237 tyrosine phenol-lyase 99.7 7.4E-15 1.6E-19 145.0 27.7 222 97-328 76-343 (460)
316 PRK05630 adenosylmethionine--8 99.7 2.6E-15 5.7E-20 150.7 25.1 289 96-439 80-417 (422)
317 PRK05367 glycine dehydrogenase 99.7 2.4E-15 5.2E-20 162.6 26.4 274 100-437 122-437 (954)
318 PRK07036 hypothetical protein; 99.7 1.3E-15 2.7E-20 154.8 22.4 241 96-357 92-389 (466)
319 TIGR00709 dat 2,4-diaminobutyr 99.7 2.1E-15 4.6E-20 152.6 23.6 240 96-357 79-366 (442)
320 PRK06173 adenosylmethionine--8 99.7 1.7E-15 3.7E-20 152.2 22.3 253 96-371 84-387 (429)
321 PRK05367 glycine dehydrogenase 99.7 2.2E-15 4.8E-20 162.8 24.4 292 99-441 542-874 (954)
322 TIGR03799 NOD_PanD_pyr putativ 99.7 1.1E-14 2.5E-19 148.7 28.3 204 117-327 162-427 (522)
323 PLN02590 probable tyrosine dec 99.7 2.3E-14 5E-19 146.3 30.3 290 97-439 164-529 (539)
324 PRK06943 adenosylmethionine--8 99.7 3.8E-15 8.2E-20 150.8 24.4 253 96-371 94-408 (453)
325 PLN02414 glycine dehydrogenase 99.7 6.4E-15 1.4E-19 158.6 26.2 275 100-439 149-466 (993)
326 COG0161 BioA Adenosylmethionin 99.7 4E-15 8.6E-20 145.7 22.1 299 92-441 81-446 (449)
327 KOG1402 Ornithine aminotransfe 99.7 1.9E-15 4.1E-20 138.6 18.3 254 98-371 100-388 (427)
328 PRK12566 glycine dehydrogenase 99.7 5.8E-15 1.3E-19 156.1 24.3 296 99-442 543-876 (954)
329 PRK06149 hypothetical protein; 99.7 6E-15 1.3E-19 162.3 25.5 257 95-371 620-929 (972)
330 PRK06148 hypothetical protein; 99.7 3.4E-15 7.3E-20 164.3 23.2 295 95-439 659-1007(1013)
331 PF00464 SHMT: Serine hydroxym 99.7 3.4E-15 7.4E-20 145.9 20.4 282 61-370 24-355 (399)
332 PRK06938 diaminobutyrate--2-ox 99.7 9.5E-15 2.1E-19 148.2 24.3 240 96-357 103-391 (464)
333 PRK06916 adenosylmethionine--8 99.7 7.7E-15 1.7E-19 148.9 23.5 241 97-357 97-392 (460)
334 TIGR03251 LAT_fam L-lysine 6-t 99.7 9.4E-15 2E-19 147.4 23.6 288 97-438 83-430 (431)
335 PRK07483 hypothetical protein; 99.7 4.3E-15 9.3E-20 150.1 21.2 240 96-357 70-366 (443)
336 COG0076 GadB Glutamate decarbo 99.7 1.5E-14 3.3E-19 145.2 24.7 230 102-358 104-381 (460)
337 TIGR00508 bioA adenosylmethion 99.7 1.5E-14 3.3E-19 145.6 24.7 289 97-439 86-423 (427)
338 PRK00615 glutamate-1-semialdeh 99.7 6E-15 1.3E-19 148.2 21.6 218 97-319 91-341 (433)
339 KOG1404 Alanine-glyoxylate ami 99.7 9.2E-15 2E-19 137.3 20.5 247 91-357 84-374 (442)
340 PRK08742 adenosylmethionine--8 99.7 2.4E-14 5.3E-19 145.3 25.1 172 96-270 104-329 (472)
341 PRK07480 putative aminotransfe 99.7 1E-14 2.2E-19 147.8 22.3 242 96-357 91-385 (456)
342 PRK07030 adenosylmethionine--8 99.7 2.7E-14 5.8E-19 145.0 25.3 241 96-357 87-383 (466)
343 KOG2862 Alanine-glyoxylate ami 99.7 6.5E-14 1.4E-18 127.7 24.4 217 102-323 53-304 (385)
344 PRK06917 hypothetical protein; 99.7 4.1E-14 8.9E-19 143.1 25.4 242 96-357 71-366 (447)
345 PRK06931 diaminobutyrate--2-ox 99.6 4.4E-14 9.5E-19 143.3 24.3 240 96-357 98-385 (459)
346 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 2E-15 4.4E-20 148.1 14.0 213 97-318 64-315 (417)
347 COG1448 TyrB Aspartate/tyrosin 99.6 2.4E-13 5.3E-18 128.2 26.9 271 40-321 11-333 (396)
348 KOG1401 Acetylornithine aminot 99.6 6.8E-14 1.5E-18 132.5 22.8 225 91-319 90-347 (433)
349 COG3977 Alanine-alpha-ketoisov 99.6 1.7E-13 3.7E-18 124.3 22.9 296 99-439 78-412 (417)
350 PRK08297 L-lysine aminotransfe 99.6 1.7E-13 3.6E-18 138.6 25.2 288 97-439 90-438 (443)
351 COG4100 Cystathionine beta-lya 99.6 7.2E-14 1.6E-18 126.7 18.8 264 86-371 55-343 (416)
352 TIGR00699 GABAtrns_euk 4-amino 99.6 8.5E-14 1.8E-18 140.3 20.7 286 97-439 99-463 (464)
353 PF00202 Aminotran_3: Aminotra 99.6 1.1E-13 2.3E-18 135.4 18.1 219 94-319 54-315 (339)
354 PLN02974 adenosylmethionine-8- 99.6 6.5E-13 1.4E-17 141.5 24.8 197 96-295 406-707 (817)
355 TIGR02617 tnaA_trp_ase tryptop 99.6 6.9E-13 1.5E-17 129.5 22.8 246 64-328 47-352 (467)
356 PRK15029 arginine decarboxylas 99.6 2.4E-13 5.3E-18 142.8 20.7 155 98-260 204-398 (755)
357 PF00282 Pyridoxal_deC: Pyrido 99.5 2.4E-13 5.2E-18 134.1 17.0 223 97-326 73-361 (373)
358 PRK06209 glutamate-1-semialdeh 99.5 2.8E-13 6.2E-18 136.7 17.5 165 102-268 91-271 (431)
359 TIGR01365 serC_2 phosphoserine 99.5 5.8E-12 1.3E-16 123.7 24.9 285 96-439 36-370 (374)
360 COG3844 Kynureninase [Amino ac 99.5 4.7E-12 1E-16 116.5 22.4 282 102-439 79-403 (407)
361 PRK13578 ornithine decarboxyla 99.5 7.1E-12 1.5E-16 130.6 25.9 154 99-261 174-368 (720)
362 PLN02452 phosphoserine transam 99.5 5.4E-12 1.2E-16 123.9 21.5 282 98-441 51-362 (365)
363 TIGR00461 gcvP glycine dehydro 99.4 2.6E-11 5.6E-16 129.5 24.6 275 100-437 110-426 (939)
364 COG0403 GcvP Glycine cleavage 99.4 1.4E-10 3.1E-15 110.9 25.9 281 101-439 122-447 (450)
365 PRK12462 phosphoserine aminotr 99.4 4.1E-10 8.9E-15 109.6 25.2 283 98-441 48-361 (364)
366 PRK15399 lysine decarboxylase 99.4 5.2E-10 1.1E-14 116.7 27.3 153 98-261 194-380 (713)
367 PRK15400 lysine decarboxylase 99.3 2.8E-10 6E-15 118.7 24.9 145 99-251 195-372 (714)
368 PF02347 GDC-P: Glycine cleava 99.3 2E-10 4.3E-15 113.0 21.9 278 100-436 111-429 (429)
369 KOG1358 Serine palmitoyltransf 99.3 6.3E-11 1.4E-15 111.6 16.9 289 101-440 141-463 (467)
370 TIGR03811 tyr_de_CO2_Ent tyros 99.3 8.2E-09 1.8E-13 106.9 33.0 223 93-321 117-476 (608)
371 PF12897 Aminotran_MocR: Alani 99.3 5.5E-09 1.2E-13 99.3 26.7 279 100-430 70-404 (425)
372 KOG1403 Predicted alanine-glyo 99.3 1.3E-10 2.8E-15 105.8 14.8 295 99-442 87-441 (452)
373 COG1982 LdcC Arginine/lysine/o 99.3 4.5E-09 9.7E-14 105.7 26.4 155 100-262 71-246 (557)
374 PF03841 SelA: L-seryl-tRNA se 99.2 8.4E-12 1.8E-16 118.8 6.5 164 102-272 50-236 (367)
375 KOG0258 Alanine aminotransfera 99.2 4E-09 8.7E-14 99.5 23.2 203 60-271 79-324 (475)
376 COG1921 SelA Selenocysteine sy 99.2 4.5E-10 9.7E-15 108.0 16.8 159 103-272 72-246 (395)
377 KOG2467 Glycine/serine hydroxy 99.2 2.1E-08 4.5E-13 94.1 24.4 308 35-371 20-377 (477)
378 COG1003 GcvP Glycine cleavage 99.1 4.9E-09 1.1E-13 100.5 19.2 222 99-328 109-371 (496)
379 KOG1383 Glutamate decarboxylas 99.1 1E-08 2.2E-13 99.2 20.2 343 41-443 65-451 (491)
380 PF04864 Alliinase_C: Allinase 99.1 2.8E-09 6E-14 100.0 15.8 288 99-439 43-362 (363)
381 PRK12566 glycine dehydrogenase 99.1 2.9E-08 6.2E-13 106.0 24.0 271 101-437 126-439 (954)
382 KOG1412 Aspartate aminotransfe 99.0 1.2E-07 2.7E-12 87.1 21.7 236 118-371 103-374 (410)
383 KOG0628 Aromatic-L-amino-acid/ 98.7 7.6E-06 1.6E-10 79.5 23.8 254 92-371 102-427 (511)
384 KOG0629 Glutamate decarboxylas 98.7 1.5E-06 3.4E-11 83.3 16.9 212 106-322 148-415 (510)
385 COG3033 TnaA Tryptophanase [Am 98.6 1.5E-05 3.3E-10 75.1 22.5 236 73-328 62-354 (471)
386 KOG1405 4-aminobutyrate aminot 98.5 6.9E-06 1.5E-10 77.1 17.1 180 174-384 254-451 (484)
387 PF05889 SLA_LP_auto_ag: Solub 98.5 1.5E-05 3.3E-10 77.1 18.7 150 115-272 75-248 (389)
388 COG1932 SerC Phosphoserine ami 98.5 2.6E-05 5.6E-10 74.2 19.7 282 99-441 50-362 (365)
389 KOG1411 Aspartate aminotransfe 98.3 2.4E-05 5.3E-10 73.3 15.9 228 120-370 126-393 (427)
390 KOG2040 Glycine dehydrogenase 98.3 1.4E-05 3.1E-10 80.4 14.2 223 98-328 581-843 (1001)
391 KOG3846 L-kynurenine hydrolase 97.7 7.5E-05 1.6E-09 69.0 7.0 158 104-262 116-292 (465)
392 KOG2040 Glycine dehydrogenase 97.7 0.016 3.4E-07 59.2 23.7 138 103-247 167-309 (1001)
393 KOG3843 Predicted serine hydro 97.1 0.0036 7.7E-08 57.0 9.6 161 103-272 61-250 (432)
394 PLN02994 1-aminocyclopropane-1 96.9 0.0027 5.8E-08 54.4 6.5 49 102-150 95-153 (153)
395 KOG2790 Phosphoserine aminotra 95.5 0.72 1.6E-05 42.9 14.5 241 98-370 51-326 (370)
396 PF05368 NmrA: NmrA-like famil 70.8 35 0.00076 31.0 9.5 95 118-220 3-98 (233)
397 PLN02476 O-methyltransferase 70.2 59 0.0013 30.8 10.8 121 98-225 103-230 (278)
398 PF02310 B12-binding: B12 bind 65.9 24 0.00051 28.3 6.5 88 152-242 17-110 (121)
399 COG1088 RfbB dTDP-D-glucose 4, 65.0 22 0.00047 33.9 6.5 110 141-251 30-173 (340)
400 TIGR00511 ribulose_e2b2 ribose 59.9 94 0.002 29.8 10.3 102 112-222 113-223 (301)
401 PRK08335 translation initiatio 57.8 1.5E+02 0.0032 28.1 10.9 104 109-221 104-216 (275)
402 PRK08535 translation initiatio 56.8 1E+02 0.0022 29.7 10.0 104 110-222 116-228 (310)
403 TIGR00524 eIF-2B_rel eIF-2B al 54.4 1.8E+02 0.0038 28.0 11.1 105 112-222 116-237 (303)
404 cd02067 B12-binding B12 bindin 52.7 66 0.0014 25.7 6.9 83 157-242 21-108 (119)
405 COG0296 GlgB 1,4-alpha-glucan 52.7 15 0.00032 38.8 3.7 37 194-230 205-241 (628)
406 PLN02589 caffeoyl-CoA O-methyl 52.5 2E+02 0.0043 26.7 10.9 120 99-225 65-192 (247)
407 COG1198 PriA Primosomal protei 52.4 55 0.0012 35.5 7.9 70 120-191 226-301 (730)
408 cd02070 corrinoid_protein_B12- 52.2 1.5E+02 0.0033 26.3 9.8 81 139-222 83-171 (201)
409 PF01596 Methyltransf_3: O-met 52.0 90 0.002 28.0 8.2 125 99-230 31-163 (205)
410 COG1184 GCD2 Translation initi 51.5 1.8E+02 0.0038 27.9 10.3 103 114-225 119-231 (301)
411 COG1066 Sms Predicted ATP-depe 49.9 2.2E+02 0.0048 28.7 10.9 55 167-221 149-215 (456)
412 PRK10886 DnaA initiator-associ 49.7 1.8E+02 0.004 25.9 9.7 41 177-222 102-142 (196)
413 COG1105 FruK Fructose-1-phosph 49.0 64 0.0014 31.0 7.0 37 188-225 131-168 (310)
414 PRK02261 methylaspartate mutas 48.8 1.4E+02 0.003 24.9 8.3 56 157-215 25-81 (137)
415 COG1954 GlpP Glycerol-3-phosph 48.5 32 0.00069 29.8 4.3 46 174-225 12-59 (181)
416 TIGR01305 GMP_reduct_1 guanosi 48.3 2.7E+02 0.0059 27.2 13.4 178 58-243 44-241 (343)
417 PF13460 NAD_binding_10: NADH( 47.9 1.5E+02 0.0033 25.3 9.1 87 119-217 4-90 (183)
418 cd01078 NAD_bind_H4MPT_DH NADP 47.8 1.9E+02 0.0042 25.3 10.1 100 116-225 30-130 (194)
419 PRK13397 3-deoxy-7-phosphohept 46.9 2.4E+02 0.0053 26.2 12.0 135 82-226 49-194 (250)
420 COG0552 FtsY Signal recognitio 46.3 1.1E+02 0.0023 29.8 8.0 130 124-260 153-304 (340)
421 COG1087 GalE UDP-glucose 4-epi 45.8 2E+02 0.0044 27.6 9.6 98 116-218 2-111 (329)
422 COG1606 ATP-utilizing enzymes 45.5 84 0.0018 29.2 6.8 110 103-225 6-122 (269)
423 PRK11889 flhF flagellar biosyn 43.9 3.6E+02 0.0077 27.3 11.5 89 134-225 265-362 (436)
424 TIGR03573 WbuX N-acetyl sugar 43.4 1.5E+02 0.0032 29.0 8.9 116 102-225 43-169 (343)
425 PRK08329 threonine synthase; V 43.2 1.2E+02 0.0026 29.8 8.3 56 112-173 102-159 (347)
426 COG0108 RibB 3,4-dihydroxy-2-b 42.9 57 0.0012 29.1 5.2 35 186-221 156-190 (203)
427 PRK06371 translation initiatio 42.7 2.5E+02 0.0054 27.4 10.0 86 131-222 161-255 (329)
428 smart00642 Aamy Alpha-amylase 42.1 25 0.00053 30.5 2.9 28 198-225 65-92 (166)
429 KOG1465 Translation initiation 41.3 3.3E+02 0.0071 26.1 11.5 103 115-224 163-272 (353)
430 PRK12724 flagellar biosynthesi 41.3 1.5E+02 0.0033 29.9 8.6 100 124-226 238-345 (432)
431 COG1091 RfbD dTDP-4-dehydrorha 41.3 1.5E+02 0.0033 28.0 8.2 56 170-225 34-104 (281)
432 TIGR02026 BchE magnesium-proto 40.3 1E+02 0.0022 32.0 7.6 60 163-225 35-101 (497)
433 PF01008 IF-2B: Initiation fac 39.8 1.2E+02 0.0026 28.6 7.5 102 113-222 106-216 (282)
434 cd01017 AdcA Metal binding pro 39.7 3.3E+02 0.0071 25.6 11.5 69 137-220 170-247 (282)
435 PF07085 DRTGG: DRTGG domain; 39.2 90 0.0019 24.4 5.6 49 166-221 42-90 (105)
436 cd00532 MGS-like MGS-like doma 38.5 2E+02 0.0043 22.8 8.6 80 133-222 20-105 (112)
437 PF14258 DUF4350: Domain of un 38.0 1.5E+02 0.0032 21.1 6.3 59 157-222 12-70 (70)
438 PF00926 DHBP_synthase: 3,4-di 37.7 78 0.0017 28.2 5.4 35 186-221 152-186 (194)
439 TIGR03772 anch_rpt_subst ancho 36.9 4.1E+02 0.0088 27.4 11.1 69 138-219 371-448 (479)
440 PRK14106 murD UDP-N-acetylmura 36.5 1.4E+02 0.003 30.3 7.9 94 115-224 6-100 (450)
441 PRK05638 threonine synthase; V 36.1 1.5E+02 0.0031 30.3 7.9 82 80-173 84-167 (442)
442 COG0616 SppA Periplasmic serin 35.8 1.6E+02 0.0035 28.5 7.7 80 184-272 95-180 (317)
443 TIGR01501 MthylAspMutase methy 35.8 1.2E+02 0.0027 25.2 6.0 61 154-217 20-81 (134)
444 TIGR00160 MGSA methylglyoxal s 35.6 85 0.0018 26.4 4.9 49 176-224 63-112 (143)
445 PF03652 UPF0081: Uncharacteri 35.6 1.2E+02 0.0026 25.2 6.0 53 173-225 38-97 (135)
446 PRK06450 threonine synthase; V 35.6 1.9E+02 0.0041 28.3 8.2 107 79-199 68-175 (338)
447 COG2870 RfaE ADP-heptose synth 35.3 74 0.0016 31.7 5.2 37 185-223 142-178 (467)
448 TIGR01470 cysG_Nterm siroheme 35.2 3.3E+02 0.0072 24.3 9.9 93 115-225 10-104 (205)
449 KOG1663 O-methyltransferase [S 35.0 3.6E+02 0.0079 24.8 12.4 120 98-225 58-185 (237)
450 PRK00014 ribB 3,4-dihydroxy-2- 34.9 93 0.002 28.4 5.5 34 186-220 172-205 (230)
451 TIGR02990 ectoine_eutA ectoine 34.6 3.7E+02 0.0081 24.8 10.5 95 121-223 105-213 (239)
452 TIGR00649 MG423 conserved hypo 34.6 2.8E+02 0.0061 27.9 9.7 95 117-217 289-401 (422)
453 KOG1371 UDP-glucose 4-epimeras 34.4 1.8E+02 0.0038 28.2 7.4 68 115-183 3-74 (343)
454 TIGR00506 ribB 3,4-dihydroxy-2 34.0 1E+02 0.0022 27.6 5.5 34 186-220 157-190 (199)
455 COG1648 CysG Siroheme synthase 33.6 3.6E+02 0.0078 24.3 9.2 92 115-224 13-106 (210)
456 KOG2865 NADH:ubiquinone oxidor 33.6 3E+02 0.0064 26.4 8.5 97 117-217 65-169 (391)
457 COG2102 Predicted ATPases of P 33.3 3.2E+02 0.0069 24.9 8.5 119 116-248 3-147 (223)
458 KOG4589 Cell division protein 33.1 2.5E+02 0.0054 25.0 7.5 42 173-214 120-165 (232)
459 COG0352 ThiE Thiamine monophos 32.9 75 0.0016 28.7 4.6 93 175-270 24-121 (211)
460 KOG1805 DNA replication helica 32.7 3.7E+02 0.0081 30.2 10.2 113 121-248 696-832 (1100)
461 PRK00910 ribB 3,4-dihydroxy-2- 32.7 1.1E+02 0.0023 27.8 5.5 34 186-220 168-201 (218)
462 cd02072 Glm_B12_BD B12 binding 32.6 1.6E+02 0.0034 24.3 6.0 58 157-217 21-79 (128)
463 PLN02379 pfkB-type carbohydrat 32.3 3.3E+02 0.0072 26.8 9.5 36 186-224 177-212 (367)
464 PRK01792 ribB 3,4-dihydroxy-2- 31.5 1.2E+02 0.0025 27.6 5.5 34 186-220 167-200 (214)
465 PF00128 Alpha-amylase: Alpha 31.2 38 0.00083 31.9 2.7 32 194-225 43-74 (316)
466 COG1587 HemD Uroporphyrinogen- 31.1 3.7E+02 0.008 24.7 9.1 105 104-225 41-155 (248)
467 PRK09441 cytoplasmic alpha-amy 31.1 42 0.0009 34.6 3.0 31 195-225 73-103 (479)
468 PRK05580 primosome assembly pr 31.1 1.9E+02 0.0042 31.3 8.2 51 120-171 171-222 (679)
469 PRK13396 3-deoxy-7-phosphohept 31.1 5.2E+02 0.011 25.4 10.8 134 82-225 135-280 (352)
470 PF04131 NanE: Putative N-acet 30.9 78 0.0017 28.0 4.2 73 174-249 53-125 (192)
471 PRK05096 guanosine 5'-monophos 30.9 5.2E+02 0.011 25.3 13.2 124 117-241 99-240 (346)
472 PRK06036 translation initiatio 30.8 4.9E+02 0.011 25.5 10.1 87 130-222 171-265 (339)
473 PF03435 Saccharop_dh: Sacchar 30.5 4.6E+02 0.0099 25.9 10.3 90 122-223 6-97 (386)
474 CHL00200 trpA tryptophan synth 30.5 3.5E+02 0.0075 25.4 8.8 81 139-222 121-208 (263)
475 cd02071 MM_CoA_mut_B12_BD meth 29.7 2.6E+02 0.0057 22.4 7.0 63 157-222 21-87 (122)
476 PF04309 G3P_antiterm: Glycero 29.7 16 0.00036 31.9 -0.2 80 174-271 8-89 (175)
477 cd01455 vWA_F11C1-5a_type Von 29.2 1E+02 0.0022 27.4 4.6 33 189-221 115-147 (191)
478 cd02068 radical_SAM_B12_BD B12 28.7 2.9E+02 0.0062 22.2 7.2 60 163-225 15-77 (127)
479 TIGR00640 acid_CoA_mut_C methy 28.4 2.2E+02 0.0047 23.5 6.3 66 148-216 15-81 (132)
480 COG0036 Rpe Pentose-5-phosphat 28.3 4.6E+02 0.0099 23.9 9.8 122 132-273 78-214 (220)
481 TIGR02402 trehalose_TreZ malto 28.3 53 0.0011 34.5 3.2 35 194-228 151-185 (542)
482 PRK05772 translation initiatio 28.2 5.8E+02 0.013 25.2 10.1 86 131-222 192-286 (363)
483 COG0074 SucD Succinyl-CoA synt 28.1 3.2E+02 0.0069 25.9 7.8 113 138-265 44-157 (293)
484 COG0742 N6-adenine-specific me 28.1 4.3E+02 0.0092 23.4 10.6 111 96-213 21-140 (187)
485 cd04795 SIS SIS domain. SIS (S 27.9 2.4E+02 0.0052 20.5 7.8 52 164-220 25-78 (87)
486 COG0816 Predicted endonuclease 27.9 1.6E+02 0.0034 24.8 5.4 51 174-224 41-97 (141)
487 cd06448 L-Ser-dehyd Serine deh 27.9 2.6E+02 0.0056 27.0 7.7 81 114-200 51-136 (316)
488 TIGR02370 pyl_corrinoid methyl 27.8 2.8E+02 0.0062 24.6 7.5 98 140-244 86-194 (197)
489 KOG3974 Predicted sugar kinase 27.2 2E+02 0.0042 27.0 6.1 46 174-224 91-140 (306)
490 COG3010 NanE Putative N-acetyl 26.8 1.4E+02 0.0029 26.9 4.9 70 174-247 87-158 (229)
491 TIGR03649 ergot_EASG ergot alk 26.7 4.2E+02 0.0091 24.6 8.9 88 119-217 5-97 (285)
492 TIGR00250 RNAse_H_YqgF RNAse H 26.4 1.8E+02 0.0039 24.0 5.5 52 174-225 36-93 (130)
493 cd05013 SIS_RpiR RpiR-like pro 25.9 3.4E+02 0.0074 21.6 9.2 37 184-224 59-97 (139)
494 PRK12723 flagellar biosynthesi 25.8 3.7E+02 0.0081 26.8 8.5 86 137-225 205-297 (388)
495 cd02065 B12-binding_like B12 b 25.4 2.7E+02 0.0059 22.0 6.5 65 158-225 22-89 (125)
496 PRK03353 ribB 3,4-dihydroxy-2- 25.3 1.7E+02 0.0037 26.6 5.5 33 187-220 168-200 (217)
497 TIGR00595 priA primosomal prot 25.0 1.9E+02 0.0041 30.1 6.5 50 120-170 6-56 (505)
498 PF02571 CbiJ: Precorrin-6x re 24.7 80 0.0017 29.4 3.4 26 200-225 50-75 (249)
499 PRK13937 phosphoheptose isomer 24.6 4.8E+02 0.01 22.8 9.4 33 184-220 105-137 (188)
500 KOG2741 Dimeric dihydrodiol de 24.5 1.5E+02 0.0033 28.8 5.3 71 145-225 58-131 (351)
No 1
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-65 Score=493.49 Aligned_cols=386 Identities=38% Similarity=0.578 Sum_probs=351.5
Q ss_pred CCchhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCe
Q 013210 38 WEDPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEA 116 (447)
Q Consensus 38 ~~~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~ 116 (447)
++.+.|+++|+. .....+|++++|||.++||.+++.+.....+... ...|.|+|.+||++..+|+.++.++|++.
T Consensus 5 ~~~~~T~~v~~g~~~~~~~gav~~PI~~tStf~~~~~~~~~~~~~~~----~~~~~Y~R~~nPT~~~lE~~~a~LEg~~~ 80 (396)
T COG0626 5 KLSLTTRLVHAGRRPDDLTGAVNPPIYLTSTFVFDSAGEGLDAFAGE----EGGYDYSRTGNPTRDALEEALAELEGGED 80 (396)
T ss_pred ccccceeeEEcccccccCCCcccCCeeeeeeecccChhhhhhhcccc----ccCcccccCCCccHHHHHHHHHHhhCCCc
Confidence 346788888854 5667889999999999999999987766666332 45799999999999999999999999999
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCC
Q 013210 117 AYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESIS 196 (447)
Q Consensus 117 ~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~ 196 (447)
++.++||+.|+..++..++++||+|+++...|++++..+...+++ .|+++.+++..+.+++++++..++|++|++|+|.
T Consensus 81 ~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~-~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPs 159 (396)
T COG0626 81 AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQK-FGVEVTFVDPGDDEALEAAIKEPNTKLVFLETPS 159 (396)
T ss_pred EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHh-cCeEEEEECCCChHHHHHHhcccCceEEEEeCCC
Confidence 999999999999999999999999999999999999999888888 8999999998888888888833699999999999
Q ss_pred CCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcCh-HHHHHHHHHhh
Q 013210 197 NPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPA-NLVNSMMDLHQ 274 (447)
Q Consensus 197 NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~-~~~~~l~~~~~ 274 (447)
||+..+.||++|+++|+++|+++++|+++ +++.++|+++|+|++++|++|+++|+++.+||+++++. ++.+.+.....
T Consensus 160 NP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~ 239 (396)
T COG0626 160 NPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQR 239 (396)
T ss_pred CcccccccHHHHHHHHHhcCCEEEEECCcccccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHH
Confidence 99999999999999999999999999999 88999999999999999999999999999999887655 44555433322
Q ss_pred hhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013210 275 GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLL 352 (447)
Q Consensus 275 ~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 352 (447)
...|..+++..||+++++++++..|++++++++..++++|++++. +|+||+++++|+|++++++++ |+|+++
T Consensus 240 ---~~~G~~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~---g~gg~~ 313 (396)
T COG0626 240 ---ANTGAVLSPFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMT---GYGGLF 313 (396)
T ss_pred ---hhcCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcC---CCceEE
Confidence 158999999999999999999999999999999999999999887 899999999999999999987 689999
Q ss_pred EEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHH
Q 013210 353 CLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQF 432 (447)
Q Consensus 353 ~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l 432 (447)
+|++.+.+++.+|++.|+... +++|+|+++|++++|+.++|..++.+.+..+|+++++||+|+| .|+++++|++|
T Consensus 314 Sf~l~~~~~~~~f~~~L~l~~----~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVG-lEd~eDLi~Dl 388 (396)
T COG0626 314 SFELKNEEAAKKFLDSLKLFK----LAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVG-LEDVEDLIADL 388 (396)
T ss_pred EEEeCChHHHHHHHHhCCccE----EeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEec-CCCHHHHHHHH
Confidence 999996567899999999743 7999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHh
Q 013210 433 EKALSRM 439 (447)
Q Consensus 433 ~~al~~~ 439 (447)
.+||+++
T Consensus 389 ~~Al~~~ 395 (396)
T COG0626 389 EQALAKA 395 (396)
T ss_pred HHHHHhh
Confidence 9999875
No 2
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=100.00 E-value=1.8e-63 Score=487.75 Aligned_cols=376 Identities=42% Similarity=0.646 Sum_probs=324.0
Q ss_pred hHhhhc-CCCC-CCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEe
Q 013210 43 AALASA-RHEF-GEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCT 120 (447)
Q Consensus 43 ~~~~~~-~~~~-~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~t 120 (447)
|+++|+ ++.. ..+++++||||.++||.+++.+++ +.+.+. ...|.|+|.++|+...+|++||+++|++.++++
T Consensus 2 T~~vh~g~~~~~~~~~~v~~pi~~sstf~~~~~~~~-~~~~~~----~~~~~Y~R~gnPt~~~le~~la~Le~g~~a~~~ 76 (386)
T PF01053_consen 2 TLLVHAGRDPDEDQTGAVNPPIYQSSTFVFDSAEEL-DAFAGE----EKGYIYSRYGNPTVRALEQRLAALEGGEDALLF 76 (386)
T ss_dssp HHHHHTTTTGGTSTTTBSS--B---SBBBBSSHHHH-HHHTTS----SSSCSBTTTC-HHHHHHHHHHHHHHT-SEEEEE
T ss_pred cceEeCCCCCCCCCCCCeeCCccccccCcccchHHH-HhhcCC----CCCcceeccccccHHHHHHHHHHhhcccceeec
Confidence 566774 4433 478999999999999999999887 666654 446999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCc
Q 013210 121 ASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTL 200 (447)
Q Consensus 121 sggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG 200 (447)
+||+.|+.+++.+++++||+|+++...|++++..+..++++ .|+++.++|..|+++|++++ +++|++|++|+|.||+.
T Consensus 77 ~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~-~gv~v~~~d~~d~~~l~~~l-~~~t~~v~~EspsNP~l 154 (386)
T PF01053_consen 77 SSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPR-FGVEVTFVDPTDLEALEAAL-RPNTKLVFLESPSNPTL 154 (386)
T ss_dssp SSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHH-TTSEEEEESTTSHHHHHHHH-CTTEEEEEEESSBTTTT
T ss_pred cchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcc-cCcEEEEeCchhHHHHHhhc-cccceEEEEEcCCCccc
Confidence 99999999999999999999999999999999999877777 89999999999999999999 88999999999999999
Q ss_pred cccCHHHHHHHHHhcC-CEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcC--hHHHHHHHHHhhhh
Q 013210 201 AVANIPELSRLAHDKG-VTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGP--ANLVNSMMDLHQGA 276 (447)
Q Consensus 201 ~v~~l~~I~~la~~~g-i~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~--~~~~~~l~~~~~~~ 276 (447)
.+.|+++|+++||++| +++++|+++ +++.++|+.+|+|+++.|++|+++|+++.+||+++.+ +++.+.++..+.
T Consensus 155 ~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~-- 232 (386)
T PF01053_consen 155 EVPDLEAIAKLAKEHGDILVVVDNTFATPYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRR-- 232 (386)
T ss_dssp B---HHHHHHHHHHTTT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHH--
T ss_pred ccccHHHHHHHHHHhCCceEEeeccccceeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhh--
Confidence 9999999999999998 999999999 7788999999999999999999999999999999865 477788877666
Q ss_pred hhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEE
Q 013210 277 LMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCL 354 (447)
Q Consensus 277 ~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~ 354 (447)
..|..+++..|++++++++++..|++++.+++..++++|++++. +|.||+++++|+|++++++++ |+|++++|
T Consensus 233 --~~G~~~~p~da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~---g~ggl~sf 307 (386)
T PF01053_consen 233 --LLGATLSPFDAWLLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMS---GGGGLLSF 307 (386)
T ss_dssp --HHT-B--HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCS---SCTSEEEE
T ss_pred --hcCccchHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeeccc---ccCceeEE
Confidence 78999999999999999999999999999999999999999987 899999999999999999987 68889999
Q ss_pred EeCCHH-HHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHH
Q 013210 355 DMETEE-KANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFE 433 (447)
Q Consensus 355 ~l~~~~-~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~ 433 (447)
++++.. .+.+|++.|+.. . +++|+|+.+|++++|+..+|..++++.++.+|+++++||||+| .|+.+++|++|.
T Consensus 308 ~l~~~~~~~~~f~~~l~l~---~-~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvG-lEd~~dLi~Dl~ 382 (386)
T PF01053_consen 308 ELKGGEEAARRFLDALKLF---S-IAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVG-LEDPDDLIADLE 382 (386)
T ss_dssp EESSHHHHHHHHHHH-SSS---E-ESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE---SS-HHHHHHHHH
T ss_pred EeccchhhhHhHHhhhhhH---h-hhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEec-cCCHHHHHHHHH
Confidence 999774 889999999973 3 7999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHH
Q 013210 434 KALS 437 (447)
Q Consensus 434 ~al~ 437 (447)
+||+
T Consensus 383 ~AL~ 386 (386)
T PF01053_consen 383 QALE 386 (386)
T ss_dssp HHHH
T ss_pred HhcC
Confidence 9985
No 3
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.1e-64 Score=461.91 Aligned_cols=388 Identities=33% Similarity=0.514 Sum_probs=355.0
Q ss_pred CCchhhHhhhcCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeE
Q 013210 38 WEDPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAA 117 (447)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~ 117 (447)
.+.++|..+|+....+..++...|||++|+|.|++.+...+.|..+ ..++.|+|..||+...+|++||.++|.-..
T Consensus 5 ~~~f~T~~vHag~~d~~t~ara~PIyqtTsy~F~d~~haa~lF~l~----~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa 80 (426)
T COG2873 5 NWGFETLAVHAGQEDPTTGARAVPIYQTTSYVFDDTDHAAALFGLK----EPGNIYTRIMNPTTDVLEERIAALEGGVAA 80 (426)
T ss_pred ccCcchhhhcCCCCCCCCCceecceeeeeeeecCCHHHHHHHhCCC----cCCceeeeccCchHHHHHHHHHHhhcchhh
Confidence 4578888888666677889999999999999999999998888765 346899999999999999999999999899
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCC
Q 013210 118 YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISN 197 (447)
Q Consensus 118 ~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~N 197 (447)
+.++||++|+..++..++++||+|+.+...|++++.++...+++ +|+++++++.+|++.++++| +++||+|++|+..|
T Consensus 81 ~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~-~Gi~v~fvd~~d~~~~~~aI-~~nTkavf~EtigN 158 (426)
T COG2873 81 LAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKR-LGIEVRFVDPDDPENFEAAI-DENTKAVFAETIGN 158 (426)
T ss_pred hhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHh-cCcEEEEeCCCCHHHHHHHh-CcccceEEEEeccC
Confidence 99999999999999999999999999999999999999888887 89999999999999999999 99999999999999
Q ss_pred CCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcCh--HHH--------
Q 013210 198 PTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPA--NLV-------- 266 (447)
Q Consensus 198 ptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~--~~~-------- 266 (447)
|.+.+.|+++|+++||++|+++|+|+++ +++.+.|.+.|+|++++|++||+||+|-.|||+++-.. ++.
T Consensus 159 P~~~v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~ 238 (426)
T COG2873 159 PGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEF 238 (426)
T ss_pred CCccccCHHHHHHHHHHcCCcEEEecCCCcceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCccc
Confidence 9999999999999999999999999999 77889999999999999999999999999999986321 111
Q ss_pred -------------H------HHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eee
Q 013210 267 -------------N------SMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVL 325 (447)
Q Consensus 267 -------------~------~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~ 325 (447)
+ .+.+.+....+..|.+++++.|++.+.+++++..|++++.+++..++++|++++. .|+
T Consensus 239 ~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~ 318 (426)
T COG2873 239 TTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVN 318 (426)
T ss_pred CCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeee
Confidence 1 1122344566789999999999999999999999999999999999999999987 899
Q ss_pred CCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-HHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHH
Q 013210 326 YPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-EKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEE 404 (447)
Q Consensus 326 ~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~ 404 (447)
||+++++|+|.++++++.. |+|++++|.+++. +...+|++.|+... ...++|++.|++.||++++|..+++++
T Consensus 319 YpgL~~~~~h~la~kyl~~--g~g~vltF~~kgg~ea~~~fi~~l~L~s----~laNvGD~rsLvIHPAsTTH~ql~~ee 392 (426)
T COG2873 319 YPGLASHPYHALAKKYLPK--GAGAVLTFGVKGGYEAGKKFIDALKLFS----HLANIGDARSLVIHPASTTHRQLSEEE 392 (426)
T ss_pred cCCCCCCcchhHHHhhccC--CCceEEEEEecChHHHHHHHHHHHHHHH----hhccccccceeEecCcccchhcCCHHH
Confidence 9999999999999999876 7899999999954 77899999999733 588999999999999999999999999
Q ss_pred HHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 405 KALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 405 ~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
+.++|+++++||+|+| .|+++|+|.+|++||++
T Consensus 393 ~~~aGv~~~~IRlSVG-IEd~~DiiaDl~qAl~~ 425 (426)
T COG2873 393 QAAAGVTPDLIRLSVG-IEDIDDIIADLEQALEA 425 (426)
T ss_pred HHhcCCCCCcEEEEec-cCCHHHHHHHHHHHHhc
Confidence 9999999999999999 99999999999999975
No 4
>PLN02242 methionine gamma-lyase
Probab=100.00 E-value=1.7e-62 Score=489.54 Aligned_cols=410 Identities=85% Similarity=1.285 Sum_probs=362.1
Q ss_pred hcccccc-CCCCchhhHhhhcCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHH
Q 013210 29 KSMLSTA-AAWEDPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQ 107 (447)
Q Consensus 29 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ 107 (447)
|+..||+ .++-||.+.++|+...+..+++++||||.|+||.+++.+++.+++.+..+.+...|.|+|..+|++++||+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~Pt~~~LE~~ 84 (418)
T PLN02242 5 KEKKSPAESKEEDPAAALASARHEFGEHGGVNMSIEASATFTVMEPDTMRRMFSGELGPDRDFYIYSRHFNPTVLNLGRQ 84 (418)
T ss_pred ccccCchhhcCCChHHHHhcCCCCCCCCCCccCCcccCCceecCCHHHHHHHhcccccccCCCccccCCCChhHHHHHHH
Confidence 3444443 566799999999776666668889999999999999999888888665332223589999999999999999
Q ss_pred HHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccC-C
Q 013210 108 MAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQG-R 186 (447)
Q Consensus 108 ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-~ 186 (447)
+|+++|.+.+++|+||++|+.+++.+++++||+|+++.+.|+++...+...+.+..|+++++++..|++++++++ ++ +
T Consensus 85 lA~l~g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i-~~~~ 163 (418)
T PLN02242 85 MAALEGTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAV-VPGK 163 (418)
T ss_pred HHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhc-CcCC
Confidence 999999999999999999999999999999999999999999998877555544478999999988999999999 66 5
Q ss_pred ceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHH
Q 013210 187 TKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLV 266 (447)
Q Consensus 187 t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~ 266 (447)
|++|++++|+||+|.+.|+++|+++|+++|+++|+|++|+.+.+++..+|+|++++|+||+++++|+++||+++++++++
T Consensus 164 tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li 243 (418)
T PLN02242 164 TKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAELV 243 (418)
T ss_pred CEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCHHHcCCcEEEEeCccccCCCCCceEEEEEcCHHHH
Confidence 99999999999999999999999999999999999999987778888889999999999999999998889999999998
Q ss_pred HHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCC
Q 013210 267 NSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEY 346 (447)
Q Consensus 267 ~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~ 346 (447)
+.++..+.+.....|..+.++.|+..++.++++..|++++.+++++++++|++++.+|.||+++++|+|++++++++...
T Consensus 244 ~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~ 323 (418)
T PLN02242 244 NSMMDLHHGALMLLGPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGY 323 (418)
T ss_pred HHHHHHhhhhhhccCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCC
Confidence 88877654212356788889999999999999999999999999999999999988999999999999999999986555
Q ss_pred CcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCC-H
Q 013210 347 GFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGT-L 425 (447)
Q Consensus 347 g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~-~ 425 (447)
|+|++++|++++.+.+.+|+++++....+..+++|+|+++|++++|++++|..++.+.++..|+++++||||+| .|+ .
T Consensus 324 g~g~~~sf~l~~~~~~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvG-lE~~~ 402 (418)
T PLN02242 324 GFGGLLCLDMDTEERANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVG-YTGTL 402 (418)
T ss_pred CceeEEEEEECCHHHHHHHHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec-CCCCH
Confidence 89999999998877899999999963112237999999999999999999999999999999999999999999 995 9
Q ss_pred HHHHHHHHHHHHHhh
Q 013210 426 DQRWSQFEKALSRMQ 440 (447)
Q Consensus 426 ~~~i~~l~~al~~~~ 440 (447)
+++|++|.+||++++
T Consensus 403 ~dli~dl~~al~~~~ 417 (418)
T PLN02242 403 EQRWSQFEKALSAMK 417 (418)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999874
No 5
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=6.6e-61 Score=472.67 Aligned_cols=376 Identities=29% Similarity=0.424 Sum_probs=336.8
Q ss_pred chhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEE
Q 013210 40 DPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (447)
Q Consensus 40 ~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~ 118 (447)
++.+.++|+. .....+++++||||.++||.+++.. . ...|.|+|+++|+...|+++||+++|++.++
T Consensus 5 ~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~--------~----~~~~~Y~R~~npt~~~Le~~lA~leg~e~iv 72 (388)
T PRK08861 5 KPATIAVRTGIESDSQYHAVVPPIYLSTNYGFPAFG--------E----VPKYDYTRSGNPNRGLLEQTLSELESGKGAV 72 (388)
T ss_pred CcccceeECCCCCCCCCCCccCCcccCcceEeCCcC--------c----cCCccccCCCCchHHHHHHHHHHHhCCCeEE
Confidence 3556667744 3334468999999999999998731 1 2358899999999999999999999999999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCC
Q 013210 119 CTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNP 198 (447)
Q Consensus 119 ~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Np 198 (447)
+|+||++|+.+++++++++||+|+++.+.|++....+.....+ .|+++.+++..|++++++++ +++|++|++++|+||
T Consensus 73 vt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~-~gi~v~~vd~~d~e~l~~~i-~~~tklV~lesP~NP 150 (388)
T PRK08861 73 VTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANK-GDFKVQFVDQSDAAALDAAL-AKKPKLILLETPSNP 150 (388)
T ss_pred EECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhc-CCeEEEEECCCCHHHHHHhc-CcCCeEEEEECCCCC
Confidence 9999999999999999999999999999999887766444444 68999999988999999999 779999999999999
Q ss_pred CccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhh
Q 013210 199 TLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGA 276 (447)
Q Consensus 199 tG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~ 276 (447)
||.+.|+++|.++|+++|+++++|++| .+....|.++|+|++++|+||+++++++.+||+++. ++++.++++..+.
T Consensus 151 tG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~-- 228 (388)
T PRK08861 151 LVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGN-- 228 (388)
T ss_pred CCcccCHHHHHHHHHHcCCEEEEECCccccccCCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHh--
Confidence 999999999999999999999999999 566678888999999999999999998878899876 4567777776666
Q ss_pred hhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEE
Q 013210 277 LMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCL 354 (447)
Q Consensus 277 ~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~ 354 (447)
..|..+++..+++++++++++..|++++.+++..++++|++++. +|+||+++++|+|++|+++++ |+|++++|
T Consensus 229 --~~G~~~~p~~a~l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~---g~gg~~sf 303 (388)
T PRK08861 229 --CIGATGTPFDSYMTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQS---GFGSMLSF 303 (388)
T ss_pred --ccCCCCChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCC---CCCceEEE
Confidence 67999999999999999999999999999999999999999987 899999999999999999985 78999999
Q ss_pred EeC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHH
Q 013210 355 DME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFE 433 (447)
Q Consensus 355 ~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~ 433 (447)
+++ +.+.+.+|++.|+.. . +++|+|+++|++++|+.++|..++++++..+|+++++||||+| .|+.+++|++|+
T Consensus 304 ~~~~~~~~~~~f~~~l~l~---~-~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG-lE~~~dli~Dl~ 378 (388)
T PRK08861 304 EFAGSFEQLKVFVKALALF---S-LAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVG-LEDAQDLIADLD 378 (388)
T ss_pred EeCCCHHHHHHHHhcCCcc---e-EccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeC-cCCHHHHHHHHH
Confidence 997 467788999999973 3 7999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHhhh
Q 013210 434 KALSRMQD 441 (447)
Q Consensus 434 ~al~~~~~ 441 (447)
+||+++.+
T Consensus 379 ~al~~~~~ 386 (388)
T PRK08861 379 QAFAKAAE 386 (388)
T ss_pred HHHHHHHh
Confidence 99998864
No 6
>PRK08114 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.1e-60 Score=468.89 Aligned_cols=379 Identities=21% Similarity=0.356 Sum_probs=334.2
Q ss_pred chhhHhhhcCCCCC-CCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEE
Q 013210 40 DPAAALASARHEFG-EHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (447)
Q Consensus 40 ~~~~~~~~~~~~~~-~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~ 118 (447)
++.+.++|...... .+|+++||||.++||.+++.+++.+.|.+.. ...|.|+|.+||+++.||++||+++|++.++
T Consensus 5 ~~~t~~~~~~~~~~~~~~~v~~pi~~sstf~f~~~~~~~~~~~~~~---~~~~~YsR~~nPt~~~le~~la~LEg~~~a~ 81 (395)
T PRK08114 5 KLDTQLVNAGRSKKYTQGSVNSVIQRASSLVFDSVEAKKHATRNRA---NGELFYGRRGTLTHFSLQEAMCELEGGAGCA 81 (395)
T ss_pred CcchheEeCCCCCCCCCCCccCCeeCCCceecCCHHHHHHhhccCc---CCCccccCCCChhHHHHHHHHHHHhCCCeEE
Confidence 35566677443333 3489999999999999999988887775531 2358999999999999999999999999999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCC
Q 013210 119 CTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNP 198 (447)
Q Consensus 119 ~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Np 198 (447)
+++|||+|+++++.+++++||+|+++...|+++...+...+++ .|+++.+++..|.+++++++ +++|++|++|+|+||
T Consensus 82 ~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~-~Gi~v~~vd~~d~~~l~~~l-~~~TrlV~~EtpsNp 159 (395)
T PRK08114 82 LYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSK-LGVTTTWFDPLIGADIAKLI-QPNTKVVFLESPGSI 159 (395)
T ss_pred EEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHh-cCcEEEEECCCCHHHHHHhc-CCCceEEEEECCCCC
Confidence 9999999999999999999999999999999999988777776 89999999988999999999 789999999999999
Q ss_pred CccccCHHHHHHHHHhc--CCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhh
Q 013210 199 TLAVANIPELSRLAHDK--GVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQG 275 (447)
Q Consensus 199 tG~v~~l~~I~~la~~~--gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~ 275 (447)
+|.+.|+++|+++||++ |+++++|++| .++.++|.++|+|++++|+||+++|+++.++|+++.+++.++.++..+.
T Consensus 160 ~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~- 238 (395)
T PRK08114 160 TMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSY- 238 (395)
T ss_pred CCEeecHHHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHH-
Confidence 99999999999999998 4999999999 7777999999999999999999999999999988888877776665554
Q ss_pred hhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013210 276 ALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLC 353 (447)
Q Consensus 276 ~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 353 (447)
..|..+++..|++++++++++..|++++.+++..++++|++++. +|+||+++++|+|++++++++ |+|++++
T Consensus 239 ---~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~---g~gg~~s 312 (395)
T PRK08114 239 ---LMGQMVDADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFT---GSSGLFS 312 (395)
T ss_pred ---hccCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCC---CCceEEE
Confidence 67999999999999999999999999999999999999999987 899999999999999999986 6899999
Q ss_pred EEeCC---HHHHHHHHHHhhcccccccccccccCcccccc--ccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHH
Q 013210 354 LDMET---EEKANRLMNYLQNYAQFGFMAVSLGYYETLMS--CSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQR 428 (447)
Q Consensus 354 ~~l~~---~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~--~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~ 428 (447)
|++++ .+.+.+|++.|+.. . +++|+|+++|+++ +|...++.. +.+ ..++.+++||+|+| .|+.+++
T Consensus 313 f~l~~~~~~~~~~~f~~~l~l~---~-~a~SlGg~~SLi~~~~~~~~~~~~-~~~---~~~~~~~liRlSvG-lEd~~DL 383 (395)
T PRK08114 313 FVLKKKLTDEQLANYLDNFSLF---S-MAYSWGGFESLILANQPEEIAAIR-PAG---EVDFTGTLIRLHIG-LEDVDDL 383 (395)
T ss_pred EEecCcccHHHHHHHHHhCCcc---e-eecccCCccceeccCCchhhhccC-Chh---HhcCCCCeEEEEec-cCCHHHH
Confidence 99974 56788999999973 3 7999999999998 454444433 333 34677799999999 9999999
Q ss_pred HHHHHHHHHHh
Q 013210 429 WSQFEKALSRM 439 (447)
Q Consensus 429 i~~l~~al~~~ 439 (447)
|++|.+||+++
T Consensus 384 i~Dl~~Al~~~ 394 (395)
T PRK08114 384 IADLAAGFARI 394 (395)
T ss_pred HHHHHHHHHhh
Confidence 99999999865
No 7
>PRK09028 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=2.2e-60 Score=468.31 Aligned_cols=381 Identities=25% Similarity=0.389 Sum_probs=336.9
Q ss_pred hhhHhhhcCCCCC-CCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEE
Q 013210 41 PAAALASARHEFG-EHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (447)
Q Consensus 41 ~~~~~~~~~~~~~-~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~ 119 (447)
+.+.++|+....+ .+|++++|||.++||.+++.+.+.+.+.+.. ...+.|+|..+|+...||+.||++++++.+++
T Consensus 5 ~~t~~~~~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~---~~~~~Y~r~~npt~~~Le~~iA~le~~~~~~~ 81 (394)
T PRK09028 5 KATKIVSAGRDKKWTKGVINPPVFRASTVVFDTVAEMRHAAKNRA---NGEMFYGRRGTPTHFAFQAAIVELEGGAGTAL 81 (394)
T ss_pred ccceeEEcCCCCCCCCCCccCCeeCCCCcccCCHHHHHHHhccCc---cCCceecCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 4566677443233 3489999999999999999988877765432 23588999999999999999999999999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCC
Q 013210 120 TASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPT 199 (447)
Q Consensus 120 tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Npt 199 (447)
|+||++|+++++.+++++||+||++++.|+++...+...+.+ .|+++.+++..+.+++++++ +++|++|++++|+||+
T Consensus 82 ~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~-~Gi~v~~v~~~~~e~l~~~l-~~~TklV~lespsNPt 159 (394)
T PRK09028 82 YPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKG-FGIETTYYDPMIGEGIRELI-RPNTKVLFLESPGSIT 159 (394)
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhh-cceEEEEECCCCHHHHHHhc-CcCceEEEEECCCCCC
Confidence 999999999999999999999999999999998877555555 79999999888889999999 7899999999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhh
Q 013210 200 LAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALM 278 (447)
Q Consensus 200 G~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~ 278 (447)
|.+.|+++|+++||++|+++++|++| .++.++|.++|+|++++|+||+++|+|+.+||+++.++++++.+...+.
T Consensus 160 g~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~---- 235 (394)
T PRK09028 160 MEVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSY---- 235 (394)
T ss_pred CcHHHHHHHHHHHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHH----
Confidence 99999999999999999999999999 7777899999999999999999999999999999888888777775555
Q ss_pred hcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEe
Q 013210 279 LLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDM 356 (447)
Q Consensus 279 ~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l 356 (447)
..|..+++..|++++++++++..|++++.+++..++++|++++. +|+||+++++|+|++++++++ |+|++++|++
T Consensus 236 ~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~---g~gg~~sf~l 312 (394)
T PRK09028 236 LMGQCTSPDDVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFS---GSNGLFSFVL 312 (394)
T ss_pred hcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhcc---CCCceEEEEE
Confidence 67999999999999999999999999999999999999999986 899999999999999999986 6899999999
Q ss_pred C--CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 013210 357 E--TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEK 434 (447)
Q Consensus 357 ~--~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~ 434 (447)
+ +.+.+.+|++.|+... +++|+|+.+|++++|+++++... ....|+.+++||||+| .|+.+++|++|.+
T Consensus 313 ~~~~~~~~~~f~~~l~l~~----~~~slG~~~sLv~~p~~~~~~~~----~~~~~~~~~liR~svG-lEd~~dLi~Dl~~ 383 (394)
T PRK09028 313 KQGDPKAVTALVEGMQHFK----MGFSWGGFESLILGVFGINKLRT----ATNWDFSKPLIRLHIG-LEDVDDLIADLEA 383 (394)
T ss_pred CCCCHHHHHHHHHhCCcce----EecccCCCcceeECCCCcCccCc----hhhhcCCCCeEEEEeC-cCCHHHHHHHHHH
Confidence 7 4567889999999733 79999999999999987765433 2336788899999999 9999999999999
Q ss_pred HHHHhhhc
Q 013210 435 ALSRMQDS 442 (447)
Q Consensus 435 al~~~~~~ 442 (447)
||++.+.+
T Consensus 384 Al~~~~~~ 391 (394)
T PRK09028 384 GFERYNAV 391 (394)
T ss_pred HHHHHHHH
Confidence 99987654
No 8
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.5e-60 Score=471.96 Aligned_cols=384 Identities=33% Similarity=0.569 Sum_probs=344.7
Q ss_pred chhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEE
Q 013210 40 DPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (447)
Q Consensus 40 ~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~ 118 (447)
++.+.++|+. .....++++.+|||.++||.+++.+++.+.+.+. .+.|.|+|..+|+++++|+++|+++|++.++
T Consensus 8 ~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i 83 (398)
T PRK08249 8 GVGTKAVWAGEKEYLPYGATQVPVVLSVAYGYDDIDEWYDVALGK----KPGHIYSRNTNPTVQAFEEKVRILEGAEAAT 83 (398)
T ss_pred CcccceeeCCCCCCCCCCCccCCccCCcceecCCHHHHHHhhcCC----cCCccccCCCChHHHHHHHHHHHHhCCCeEE
Confidence 3556677754 3334578999999999999999987777666543 2458999999999999999999999999999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCC
Q 013210 119 CTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNP 198 (447)
Q Consensus 119 ~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Np 198 (447)
+++||++|+..++.+++++||+|+++.+.|+++...+...+++ .|+++.+++..|++++++++ +++|++|++++|+||
T Consensus 84 ~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~-~Gi~v~~vd~~d~e~l~~~i-~~~tklV~ie~p~NP 161 (398)
T PRK08249 84 AFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPR-MGVDVTLCETGDHEQIEAEI-AKGCDLLYLETPTNP 161 (398)
T ss_pred EeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhh-CCeEEEEcCCCCHHHHHHhc-CCCCeEEEEECCCCC
Confidence 9999999999999999999999999999999988777555555 79999999988999999999 788999999999999
Q ss_pred CccccCHHHHHHHHHhcCCEEEEeCCCC-CCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhh
Q 013210 199 TLAVANIPELSRLAHDKGVTVVVDNTFS-PLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL 277 (447)
Q Consensus 199 tG~v~~l~~I~~la~~~gi~livD~~~~-~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~ 277 (447)
+|.+.|+++|.++|+++|+++|+|++|+ ++...+..+++|++++|+||+++++|+++||++++++++++.++..+.
T Consensus 162 tg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~--- 238 (398)
T PRK08249 162 TLKIVDIERLAAAAKKVGALVVVDNTFATPINQNPLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYRE--- 238 (398)
T ss_pred CCccCCHHHHHHHHHHcCCEEEEECCcCccccCCchhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHH---
Confidence 9999999999999999999999999994 554556677999999999999999999888999999999988887766
Q ss_pred hhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013210 278 MLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 355 (447)
Q Consensus 278 ~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 355 (447)
..|..+++..+++++++++++..|++++.+++..+.++|++++. +|+||+++++|+|++++++++ |+|++++|+
T Consensus 239 -~~g~~~s~~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~---g~g~~~sf~ 314 (398)
T PRK08249 239 -INGATMDPMSAYLILRGMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMR---GFGGILSFV 314 (398)
T ss_pred -hcCCCCCHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCC---CCCceEEEE
Confidence 57888999999999999999999999999999999999999886 899999999999999999985 789999999
Q ss_pred eC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 013210 356 ME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEK 434 (447)
Q Consensus 356 l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~ 434 (447)
++ +.+.+.+|++.|+.. . +++|+|+.+|++++|+.++|..++.+.+..+|+++++||||+| .|+.+++|++|.+
T Consensus 315 ~~~~~~~~~~f~~~l~l~---~-~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~dl~~ 389 (398)
T PRK08249 315 LKGGMDTVKRLLPKLRYA---H-RAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVG-IEDTEDLIADLEQ 389 (398)
T ss_pred EcCCHHHHHHHHHhCCcc---e-EccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHHH
Confidence 97 556688999999973 3 7999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHhhh
Q 013210 435 ALSRMQD 441 (447)
Q Consensus 435 al~~~~~ 441 (447)
||+.+..
T Consensus 390 al~~~~~ 396 (398)
T PRK08249 390 AFAHLES 396 (398)
T ss_pred HHHHhhh
Confidence 9998754
No 9
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=6.3e-60 Score=472.15 Aligned_cols=396 Identities=30% Similarity=0.471 Sum_probs=345.7
Q ss_pred ccCCCCchhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHh
Q 013210 34 TAAAWEDPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALE 112 (447)
Q Consensus 34 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~ 112 (447)
||.+..++.+.++|.. .....+|++++|||.++||.+++.+++.+.+... ...|.|+|..+|+++++|+.+|+++
T Consensus 2 ~~~~~~~~~t~~~~~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~----~~~~~y~R~~~p~~~~le~~lA~l~ 77 (433)
T PRK08134 2 PGMSPPGFDTLALHAGAAPDPATGARAVPIHLTTSFVFRDSDHAAALFNLE----RAGHVYSRISNPTVAVLEERVAALE 77 (433)
T ss_pred CCCCCCCcchhheeCCCCCCCCCCCccCCccCCCccccCCHHHHHHhhccc----ccCceeecCcChHHHHHHHHHHHHh
Confidence 5566667878888854 3345579999999999999999998887776543 2468999999999999999999999
Q ss_pred CCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEE
Q 013210 113 GTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYF 192 (447)
Q Consensus 113 g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i 192 (447)
|++.+++|+|||+|+++++.+++++||+||++..+|+++...+...+.+ .|++++++|.+|++++++++ +++|++|++
T Consensus 78 g~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~-~Gi~v~~vd~~d~~~l~~~i-~~~TklV~~ 155 (433)
T PRK08134 78 GGVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRR-FGIETTFVKPGDIDGWRAAI-RPNTRLLFG 155 (433)
T ss_pred CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhh-CCeEEEEECCCCHHHHHHhc-CCCCeEEEE
Confidence 9999999999999999999999999999999999999998887655555 79999999999999999999 889999999
Q ss_pred EcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHH-----
Q 013210 193 ESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLV----- 266 (447)
Q Consensus 193 ~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~----- 266 (447)
++++||+|.++|+++|+++|+++|+++|+|++| .+....+..+|+|++++|.||+++++|+.+||+++....+.
T Consensus 156 e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~ 235 (433)
T PRK08134 156 ETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASG 235 (433)
T ss_pred ECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEeccccccCCCCCceEEEEEecCcccccccc
Confidence 999999999999999999999999999999999 66667788889999999999999999999988876421100
Q ss_pred ------------------------HHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC
Q 013210 267 ------------------------NSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL 322 (447)
Q Consensus 267 ------------------------~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~ 322 (447)
..+...+.......|..+++..|+..+++++++..|++++.+++..++++|++++.
T Consensus 236 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~ 315 (433)
T PRK08134 236 KFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPA 315 (433)
T ss_pred ccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 00111111122356888999999999999999999999999999999999999976
Q ss_pred --eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCC
Q 013210 323 --KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSE 399 (447)
Q Consensus 323 --~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~ 399 (447)
+|.||+++++|+|++++++++. |+|++++|+++ +.+.+.+|++.|+.. . +++|+|+.+|++++|+.++|..
T Consensus 316 V~~V~yP~l~~~p~~~~~~~~~~~--g~gg~~s~~l~~~~~~~~~f~~~l~l~---~-~~~slG~~~sL~~~p~~~~h~~ 389 (433)
T PRK08134 316 VARVAHPELESHPDHALAKRLLPR--GAGSVFSFDLKGGRAAGRKFIESLKLF---S-HLANVGDARSLVIHPASTTHFR 389 (433)
T ss_pred ccEEECCCCCCCccHHHHHHhCCC--CCceEEEEEecCCHHHHHHHHHhCCcc---e-eccccCCCCceeeCCCccCccc
Confidence 8999999999999999998843 68999999997 456788999999973 3 7999999999999999999999
Q ss_pred CCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhc
Q 013210 400 LNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDS 442 (447)
Q Consensus 400 ~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~ 442 (447)
++.+.++.+|+++++||||+| .|+.+++|++|.+||++++..
T Consensus 390 ~~~~~~~~~Gi~~~liRlsvG-lE~~~dli~dl~~Al~~~~~~ 431 (433)
T PRK08134 390 MDAAALAAAGIGEGTIRLSIG-LEDADDLIDDLKRALKAAEKA 431 (433)
T ss_pred CCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHHHHHHhhhhc
Confidence 999999999999999999999 999999999999999987644
No 10
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=4.1e-60 Score=469.98 Aligned_cols=390 Identities=28% Similarity=0.422 Sum_probs=341.5
Q ss_pred CCchhhHhhhcCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeE
Q 013210 38 WEDPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAA 117 (447)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~ 117 (447)
.++|.+.++|+......+++++||||.+|||.+++.+++...++.. .+.+.|+|..+|+++.+|+.||+++|++.+
T Consensus 4 ~~~~~t~~~~~g~~~~~~~~~~~PI~~sst~~f~~~~~~~~~~~~~----~~g~~ysR~~nPtv~~lE~~la~leg~~~a 79 (432)
T PRK06702 4 SWGKGTICVQGGYTPKNGEPRVLPLYQSTTYKYDTSDDLAALFNLE----AEGYIYTRIGNPTLAAFEQKLAELEGGVGA 79 (432)
T ss_pred CCCcchHheeCCCCCCCCCCccCCccCCcceecCCHHHHHHHHhcc----ccCceeECCCCcHHHHHHHHHHHHhCCCcE
Confidence 3467788888543334478999999999999999988777766543 246889999999999999999999999999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-CHHHHHHhhccCCceEEEEEcCC
Q 013210 118 YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESIS 196 (447)
Q Consensus 118 ~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~~~t~lV~i~~~~ 196 (447)
++|+|||+|+.+++.+++++||+||++.+.|.++...+...+.+ .|+++++++.. |+++++++| +++|++|++++|+
T Consensus 80 v~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~-~Gi~v~~vd~~~d~~~l~~~I-~~~Tk~I~~e~pg 157 (432)
T PRK06702 80 VATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRK-LGIDVTFFNPNLTADEIVALA-NDKTKLVYAESLG 157 (432)
T ss_pred EEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHH-CCCEEEEECCCCCHHHHHHhC-CcCCeEEEEEcCC
Confidence 99999999999999999999999999999999998887555555 79999999984 999999999 8899999999999
Q ss_pred CCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChH----------H
Q 013210 197 NPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAN----------L 265 (447)
Q Consensus 197 NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~----------~ 265 (447)
||++.+.|+++|+++|+++|+++++|+++ +++.++|.++|+|++++|+||+++++++.+||+++.... +
T Consensus 158 nP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l 237 (432)
T PRK06702 158 NPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPEL 237 (432)
T ss_pred CccccccCHHHHHHHHHHcCCEEEEECCCCchhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCccccccccccc
Confidence 99999999999999999999999999999 777889999999999999999999999999998874221 1
Q ss_pred HH-----------------H-HHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eee
Q 013210 266 VN-----------------S-MMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVL 325 (447)
Q Consensus 266 ~~-----------------~-l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~ 325 (447)
.+ . +.+.+.......|..+++..+++++++++++..|++++.+++..++++|++++. .|.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~ 317 (432)
T PRK06702 238 VEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVN 317 (432)
T ss_pred ccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEE
Confidence 10 0 111111122356889999999999999999999999999999999999999986 799
Q ss_pred CCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHH
Q 013210 326 YPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEE 404 (447)
Q Consensus 326 ~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~ 404 (447)
||+++++|+|++++++++. |+|++++|+++ +.+.+.+|++.|+.. . +++|+|+++|++.+|++++|..++.+.
T Consensus 318 yPgl~~~p~~~l~~~~~~~--g~gg~~sf~l~~~~~~~~~f~~~l~l~---~-~a~slGg~~Slv~~p~~~th~~~~~~~ 391 (432)
T PRK06702 318 YPGLDSNENYSLAQKYLKK--GASGVLTFGIKGGLEAAKEFIANVKLA---T-LVTHVADARTCVIHPASTTHRQLSAED 391 (432)
T ss_pred CCCCCCCccHHHHHHhCcC--CCceEEEEEecCCHHHHHHHHHhCccc---e-eccccCCCCcceECCCCCCcccCCHHH
Confidence 9999999999999999853 68999999997 567788999999973 3 799999999999999999999999999
Q ss_pred HHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 405 KALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 405 ~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
++.+|+++++||||+| .|+.+++|++|++||+-=+
T Consensus 392 ~~~~Gi~~~liRlSvG-lEd~eDLi~Dl~~Al~~~~ 426 (432)
T PRK06702 392 QRLAGVTSDLIRLSVG-IEDVSDIIADLEAALVGGK 426 (432)
T ss_pred HHhcCCCCCeEEEEec-cCCHHHHHHHHHHHHhcCc
Confidence 9999999999999999 9999999999999997543
No 11
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.4e-59 Score=468.15 Aligned_cols=389 Identities=32% Similarity=0.510 Sum_probs=339.9
Q ss_pred CchhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeE
Q 013210 39 EDPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAA 117 (447)
Q Consensus 39 ~~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~ 117 (447)
+++.+.++|.. .....+|++.+|||.++||.+++.+++.+.+... ...+.|+|..+|+...|++.||+++|++.+
T Consensus 7 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~Le~~lA~leg~~~a 82 (431)
T PRK08248 7 FRLETLAIHAGQEIDPTTGSRAVPIYQTTSYGFRDSEHAANLFSLK----EFGNIYTRIMNPTTDVFEKRIAALEGGIGA 82 (431)
T ss_pred CCcchhheeCCcCCCCCCCCccCCeeCCCccccCCHHHHHhhhccc----cCCceeECCCCchHHHHHHHHHHHhCCCcE
Confidence 34667777754 3344579999999999999999998887776543 235889999999999999999999999999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCC
Q 013210 118 YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISN 197 (447)
Q Consensus 118 ~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~N 197 (447)
++|+||++|+.+++.+++++||+|+++.+.|+++...+...+.+ .|+++++++..|++++++++ ++++++|++++|+|
T Consensus 83 l~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~-~Gv~v~~vd~~d~e~l~~ai-~~~tklV~l~sp~N 160 (431)
T PRK08248 83 LAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPK-LGITVKFVDPSDPENFEAAI-TDKTKALFAETIGN 160 (431)
T ss_pred EEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHh-CCEEEEEECCCCHHHHHHhc-CCCCeEEEEECCCC
Confidence 99999999999999999999999999999999888777665655 79999999999999999999 77899999999999
Q ss_pred CCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHH----------
Q 013210 198 PTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLV---------- 266 (447)
Q Consensus 198 ptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~---------- 266 (447)
|+|.+.|+++|+++|+++|+++|+|++| .+....+.++|+|+++.|+||++|++|+++||+++.+.+..
T Consensus 161 PtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~ 240 (431)
T PRK08248 161 PKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLLRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGL 240 (431)
T ss_pred CCCcccCHHHHHHHHHHcCCEEEEeCCCCccccCChhHcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccc
Confidence 9999999999999999999999999999 55666777889999999999999999999988887543210
Q ss_pred -------------HHH------HHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eee
Q 013210 267 -------------NSM------MDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVL 325 (447)
Q Consensus 267 -------------~~l------~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~ 325 (447)
+.+ ...+.......|..+++..|++++++++++..|++++.+++..++++|++++. +|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~ 320 (431)
T PRK08248 241 TEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVS 320 (431)
T ss_pred cCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEE
Confidence 100 01111122367899999999999999999999999999999999999999986 899
Q ss_pred CCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHH
Q 013210 326 YPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEE 404 (447)
Q Consensus 326 ~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~ 404 (447)
||+++++|+|+++++++++ |+|++++|+++ +.+.+.+|++.|+... +++|+|+.+|++++|++++|..+++++
T Consensus 321 yPgl~s~p~~~~~~~~~~~--g~gg~~sf~l~~~~~~~~~f~~~l~l~~----~~~slG~~~sl~~~p~~~~h~~~~~~~ 394 (431)
T PRK08248 321 YPGLPSHPSYELAKKYLPK--GQGAILTFGIKGGVEAGKKLIDSVKLFS----HLANVGDSKSLIIHPASTTHQQLSEEE 394 (431)
T ss_pred CCCCCCCccHHHHHHhCcC--CCceEEEEEecCCHHHHHHHHHhCCcce----eccccCCCCeeeeCCCcCccccCCHHH
Confidence 9999999999999999853 68999999996 4567889999999733 799999999999999999999999999
Q ss_pred HHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 405 KALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 405 ~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
+..+|+++++||||+| .|+.+++|++|++||++++
T Consensus 395 ~~~~gi~~~liRlsvG-lEd~~dL~~Dl~~Al~~~~ 429 (431)
T PRK08248 395 QLAAGVTPGLVRLSVG-TEAIDDILDDLRQAIRQSQ 429 (431)
T ss_pred HHhcCCCCCeEEEEec-cCCHHHHHHHHHHHHHhhh
Confidence 9999999999999999 9999999999999999775
No 12
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=100.00 E-value=4.6e-59 Score=462.66 Aligned_cols=384 Identities=36% Similarity=0.580 Sum_probs=341.2
Q ss_pred chhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEE
Q 013210 40 DPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (447)
Q Consensus 40 ~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~ 118 (447)
++.+.++|+. .....+|+++||||.++||.+++.+.+.+.|.+. ...|.|+|+++|.++++|+++|+++|++.++
T Consensus 3 ~~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~le~~lA~l~g~~~av 78 (391)
T TIGR01328 3 TFATRAIHAGYPPKDQFGALTPPIYQTSTFVFDSCEQGGNRFAGQ----ESGYIYSRLGNPTVSNLEGRIAFLEGTEAAV 78 (391)
T ss_pred CcccceeeCCccCCCCCCCccCCcccCcceecCChHHHHHhhcCC----cCCCceeCCCCchHHHHHHHHHHHhCCCcEE
Confidence 3556667744 3445579999999999999999998888877543 2368999999999999999999999999999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCC
Q 013210 119 CTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNP 198 (447)
Q Consensus 119 ~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Np 198 (447)
+++||++|+.+++.+++++||+|+++.+.|+++...+...... .|+++.+++.+|++++++++ +++|++|++++|+||
T Consensus 79 ~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~-~G~~~~~vd~~d~e~l~~~i-~~~tklV~le~p~Np 156 (391)
T TIGR01328 79 ATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTK-FGIQVDFINMAIPEEVKAHI-KDNTKIVYFETPANP 156 (391)
T ss_pred EECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhc-CCeEEEEECCCCHHHHHHhh-ccCCeEEEEECCCCC
Confidence 9999999999999999999999999999999888777665555 79999999999999999999 788999999999999
Q ss_pred CccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhh
Q 013210 199 TLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL 277 (447)
Q Consensus 199 tG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~ 277 (447)
+|.+.|+++|.++|+++|+++|+|++| .+....+...++|++++|++|++|++|+++||++++++++++.++.....
T Consensus 157 ~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~-- 234 (391)
T TIGR01328 157 TMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIK-- 234 (391)
T ss_pred CCcccCHHHHHHHHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHH--
Confidence 999999999999999999999999999 44555677789999999999999999998889999999988888754321
Q ss_pred hhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013210 278 MLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 355 (447)
Q Consensus 278 ~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 355 (447)
...|..+++..|++++++++++..|+++..++++.+.++|++++. .|.||+++++|+|++|+++++ |+|++++|+
T Consensus 235 ~~~g~~l~~~~a~l~l~~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~---~~g~~~s~~ 311 (391)
T TIGR01328 235 DMTGSVISPFDAWLILRGLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMR---MGGGMITFE 311 (391)
T ss_pred hCCCCCCCcHHHHHHHhCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCC---CCCceEEEE
Confidence 134677888899999999999999999999999999999999875 899999999999999999986 689999999
Q ss_pred eC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 013210 356 ME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEK 434 (447)
Q Consensus 356 l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~ 434 (447)
++ +.+.+.+|++.|+... +++|+|+.+|++++|++++|..++.+++..+|+++++||||+| .|+.+++|++|++
T Consensus 312 ~~~~~~~~~~f~~~l~~~~----~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~dl~~ 386 (391)
T TIGR01328 312 LKGGFAGAKKLLNNLKLIR----LAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVG-LEDADDLIADLKQ 386 (391)
T ss_pred eCCCHHHHHHHHHhCCcce----EecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeC-cCCHHHHHHHHHH
Confidence 97 5567889999999733 6999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHh
Q 013210 435 ALSRM 439 (447)
Q Consensus 435 al~~~ 439 (447)
||+++
T Consensus 387 al~~~ 391 (391)
T TIGR01328 387 ALDAL 391 (391)
T ss_pred HHhhC
Confidence 99864
No 13
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-59 Score=446.08 Aligned_cols=383 Identities=37% Similarity=0.533 Sum_probs=343.7
Q ss_pred CchhhHhhhcCCCCCC--CCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCe
Q 013210 39 EDPAAALASARHEFGE--HGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEA 116 (447)
Q Consensus 39 ~~~~~~~~~~~~~~~~--~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~ 116 (447)
.++.++++|...+... +++|.+||+.+++++|... +....-+....+|.|+|.++|+...++..|+++.|++.
T Consensus 20 ~~~~t~~~~~g~~~~~~~~~~v~~pI~~~~s~tfk~~-----~~~~~~~~~~~~~~Ysr~~nPt~~~le~~iaal~ga~~ 94 (409)
T KOG0053|consen 20 SHLDTNLLHAGQDPEKAIHNAVAPPIYATLSTTFKQD-----LNEGEHGGNLDGYDYSRSGNPTRDVLESGIAALEGAAH 94 (409)
T ss_pred cccchhhhhcccccchhccccccCceecccceeeccc-----CccccccccccccccccCCCCchHHHHHHHHHHhCCce
Confidence 4788999996655455 8999999995555555443 01111111112699999999999999999999999999
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCC
Q 013210 117 AYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESIS 196 (447)
Q Consensus 117 ~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~ 196 (447)
+++++||+.|+..+++.++++|++|++....|.+++..++.+.++ +|++..+++.++++++++++ +++|++|++|+|.
T Consensus 95 ~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~-~gie~~~vd~~~~~~~~~~i-~~~t~~V~~ESPs 172 (409)
T KOG0053|consen 95 ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPK-FGGEGDFVDVDDLKKILKAI-KENTKAVFLESPS 172 (409)
T ss_pred EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHH-hCceeeeechhhHHHHHHhh-ccCceEEEEECCC
Confidence 999999999999999999999999999999999999999998886 99999999999999999999 7799999999999
Q ss_pred CCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcC-hHHHHHHHHHhh
Q 013210 197 NPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGP-ANLVNSMMDLHQ 274 (447)
Q Consensus 197 NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~-~~~~~~l~~~~~ 274 (447)
||++.+.||++|+++||++|+++++|+++ +++.++|+.+|+|++++|++|++||+++.|||.++.+ +++.++++..+.
T Consensus 173 NPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~ 252 (409)
T KOG0053|consen 173 NPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQE 252 (409)
T ss_pred CCccccccHHHHHHHHhhCCCEEEEeCCcCcccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999 6668899999999999999999999999999999986 889999988876
Q ss_pred hhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013210 275 GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLL 352 (447)
Q Consensus 275 ~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 352 (447)
..|+.+++..+++..++++++..|++++.+++..++++|..++. +++||++++||+|++++++.++. +|+++
T Consensus 253 ----~lg~~~~p~~~~ll~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~--~G~l~ 326 (409)
T KOG0053|consen 253 ----DLGWCEDPFDLFLLSRGLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGG--YGGLS 326 (409)
T ss_pred ----HhcCCCCHHHHHHHhcCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCC--cceEE
Confidence 89999999999999999999999999999999999999999877 79999999999999999999863 44566
Q ss_pred EEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHH
Q 013210 353 CLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQF 432 (447)
Q Consensus 353 ~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l 432 (447)
.+.+.+.+.+.+|.+.|+... .++|+|+++|++++|+.++|.. +.+++...|+++++||+|+| .|+.++++.+|
T Consensus 327 ~~~~~~~~~a~kf~~~LK~~~----~a~SlG~~eSL~~~p~~mth~~-~~e~~~~~Gi~~~LVRvSVG-iEd~~dL~~d~ 400 (409)
T KOG0053|consen 327 SVIFGNEEHAKKFYDALKLFT----KAPSLGGNESLAEPPAIMTHAS-ELEEREKFGIDPNLVRVSVG-IEDIEDLIKDF 400 (409)
T ss_pred EEEcCCHHHHHHHHHhhhhhh----cccCcCccchhhcchhhhccCC-CHHHHHhcCCCCCcEEEEec-cCCHHHHHHHH
Confidence 666667888899999999743 6999999999999999999999 99999999999999999999 99999999999
Q ss_pred HHHHHHhh
Q 013210 433 EKALSRMQ 440 (447)
Q Consensus 433 ~~al~~~~ 440 (447)
.+||+.+.
T Consensus 401 ~~Al~~~~ 408 (409)
T KOG0053|consen 401 QQALEKAK 408 (409)
T ss_pred HHHHHhhc
Confidence 99998764
No 14
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=100.00 E-value=7.6e-59 Score=461.30 Aligned_cols=381 Identities=34% Similarity=0.564 Sum_probs=339.1
Q ss_pred CchhhHhhhcCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEE
Q 013210 39 EDPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (447)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~ 118 (447)
+++.+.++|+......++++.+|||.++||.+++++++...+.+. ...+.|+|..+|.++++|+++|+++|++.++
T Consensus 5 ~~~~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~le~~la~l~g~~~~v 80 (390)
T PRK08133 5 LGFDTLAVRAGQLRSPFGEHSEALFLTSSFVFESAAEAAARFAGE----EPGNIYSRFTNPTVTMFQERLAALEGAEACV 80 (390)
T ss_pred CCcchhheeCCCCCCCCCCccCCccCCCCcccCCHHHHHHhhcCC----cCCceeECCCChHHHHHHHHHHHHhCCCcEE
Confidence 346677788554345678999999999999999886655555332 2347799999999999999999999999999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCC
Q 013210 119 CTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNP 198 (447)
Q Consensus 119 ~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Np 198 (447)
+|+||++|+.+++.+++++||+||++.+.|+++...+...+.. .|+++++++.+|++++++++ +++|++|++++|+||
T Consensus 81 ~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~-~G~~v~~vd~~d~~~l~~~i-~~~tklV~ie~p~Np 158 (390)
T PRK08133 81 ATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFAR-FGIETTFVDLTDLDAWRAAV-RPNTKLFFLETPSNP 158 (390)
T ss_pred EECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHH-cCcEEEEECCCCHHHHHHhc-CcCCeEEEEECCCCC
Confidence 9999999999999999999999999999999988877555555 79999999999999999999 789999999999999
Q ss_pred CccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhh
Q 013210 199 TLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL 277 (447)
Q Consensus 199 tG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~ 277 (447)
+|.+.|+++|.++|+++|+++|+|++| .+....+..+|+|++++|+||+++++|.++||++++++++++.+.....
T Consensus 159 tG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~--- 235 (390)
T PRK08133 159 LTELADIAALAEIAHAAGALLVVDNCFCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLR--- 235 (390)
T ss_pred CCCcCCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHH---
Confidence 999999999999999999999999999 5555667778999999999999999999999999998888777765544
Q ss_pred hhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013210 278 MLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 355 (447)
Q Consensus 278 ~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 355 (447)
..|..+++..++.++++++++..|++++.+++..+.++|++++. .++||+++++|+|+++++++. |+|++++|+
T Consensus 236 -~~g~~~~~~~a~~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~---g~g~~~s~~ 311 (390)
T PRK08133 236 -TAGPTLSPFNAWVFLKGLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQK---GGGAIVSFE 311 (390)
T ss_pred -HhCCCCCHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCC---CCceEEEEE
Confidence 56778888899999999999999999999999999999999865 899999999999999999885 789999999
Q ss_pred eC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 013210 356 ME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEK 434 (447)
Q Consensus 356 l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~ 434 (447)
++ +.+.+.+|++.|+... +++|+|+++|++++|++++|..++.+.+..+|+++++||||+| .|+.+++|++|++
T Consensus 312 l~~~~~~~~~f~~~l~l~~----~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~dl~~ 386 (390)
T PRK08133 312 VKGGREAAWRVIDATRLIS----ITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVG-LEDVADIKADLAR 386 (390)
T ss_pred EcCCHHHHHHHHHhCCcce----EeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeC-cCCHHHHHHHHHH
Confidence 97 5667889999999733 7999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHH
Q 013210 435 ALS 437 (447)
Q Consensus 435 al~ 437 (447)
||+
T Consensus 387 al~ 389 (390)
T PRK08133 387 GLA 389 (390)
T ss_pred Hhh
Confidence 996
No 15
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.2e-58 Score=460.42 Aligned_cols=389 Identities=29% Similarity=0.459 Sum_probs=339.5
Q ss_pred CchhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeE
Q 013210 39 EDPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAA 117 (447)
Q Consensus 39 ~~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~ 117 (447)
+++.+.++|+. .....+++++||||.++||.+++.+++.+.+... .+.|.|+|..+|+.+.+++.||+++|++.+
T Consensus 12 ~~~~t~~~~~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~----~~~~~Ysr~~~p~~~~Le~~lA~l~g~~~a 87 (436)
T PRK07812 12 WSFETKQIHAGQTPDPATNARALPIYQTTSYTFDDTDHAAALFGLA----EPGNIYTRIMNPTQDVVEQRIAALEGGVAA 87 (436)
T ss_pred CCcchhheeCCCCCCCCCCCccCCCcCCCCcccCCHHHHHHhhcCC----cCCccccCCCCchHHHHHHHHHHHhCCCeE
Confidence 45668788854 3344468999999999999999988777766432 346889999999999999999999999999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC-CCCHHHHHHhhccCCceEEEEEcCC
Q 013210 118 YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD-ISDHEMVNSAIVQGRTKVLYFESIS 196 (447)
Q Consensus 118 ~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~i~~~~t~lV~i~~~~ 196 (447)
++++||++|+.+++.+++++||+|+++...|+++...+...+++ .|+++.+++ ..|++++++++ +++|++|++++|+
T Consensus 88 v~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~-~Gi~v~~vdd~~d~e~l~~ai-~~~tklV~ie~~s 165 (436)
T PRK07812 88 LLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPK-LGIEVSFVEDPDDLDAWRAAV-RPNTKAFFAETIS 165 (436)
T ss_pred EEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhc-CeEEEEEECCCCCHHHHHHhC-CCCCeEEEEECCC
Confidence 99999999999999999999999999999999998877665666 799999996 56899999999 7899999999999
Q ss_pred CCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHH---------
Q 013210 197 NPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLV--------- 266 (447)
Q Consensus 197 NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~--------- 266 (447)
||+|.+.|+++|.++|+++|+++|+|+++ .+....+.++|+|+++.|+||++|++|..+||+++....+.
T Consensus 166 Np~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~ 245 (436)
T PRK07812 166 NPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGF 245 (436)
T ss_pred CCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEEecccccCCCCCeEEEEEEcCCcccccccccccc
Confidence 99999999999999999999999999999 66677888889999999999999999999988887532110
Q ss_pred -------------H-----HHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeC
Q 013210 267 -------------N-----SMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLY 326 (447)
Q Consensus 267 -------------~-----~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~ 326 (447)
+ .+.+.+.......|..+++..|++++++++++..|++++.+++..++++|++++. +|+|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~y 325 (436)
T PRK07812 246 TTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNY 325 (436)
T ss_pred ccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEEC
Confidence 0 0001111122367999999999999999999999999999999999999999986 8999
Q ss_pred CCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHH
Q 013210 327 PGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEK 405 (447)
Q Consensus 327 p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~ 405 (447)
|+++++|+|++++++++. |+|++++|++. +.+.+.+|++.|+... +++|+|+.+|++++|+.++|..++++++
T Consensus 326 Pgl~s~p~~~~~~~~~~~--g~gg~~sf~l~~~~~~~~~f~~~l~l~~----~a~slG~~~sLi~~p~~~~h~~~~~~~~ 399 (436)
T PRK07812 326 AGLPSSPWYERAKRLAPK--GTGAVLSFELAGGVEAGKAFVNALTLHS----HVANIGDVRSLVIHPASTTHSQLTPEEQ 399 (436)
T ss_pred CCCCCCccHHHHHHhCcC--CCceEEEEEecCCHHHHHHHHHhCCcce----EecccCCCcceeeCCCCCCcccCCHHHH
Confidence 999999999999998843 68999999996 4566889999999743 7999999999999999999999999999
Q ss_pred HhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 406 ALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 406 ~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
+.+|+++++||||+| .|+.+++|++|.+||++++
T Consensus 400 ~~~gi~~~liRlSvG-lEd~~dli~dl~~Al~~~~ 433 (436)
T PRK07812 400 LATGVTPGLVRLAVG-IEGIDDILADLEAGFAAAK 433 (436)
T ss_pred HhcCCCCCeEEEEec-cCCHHHHHHHHHHHHHhhh
Confidence 999999999999999 9999999999999999775
No 16
>PRK05967 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=9.7e-59 Score=455.67 Aligned_cols=376 Identities=24% Similarity=0.400 Sum_probs=331.4
Q ss_pred CCCchhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC
Q 013210 37 AWEDPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE 115 (447)
Q Consensus 37 ~~~~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~ 115 (447)
+.+++.+.++|+. .....+|++.+|||.+|||.+++.+++.. . ...|.|+|..+|+++.+++.|+.+.+.+
T Consensus 9 ~~~~~~t~~~~~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~----~----~~~y~YsR~gnPt~~~Le~~la~le~~~ 80 (395)
T PRK05967 9 EKAGINTRLAHDGNDPGDYHGFVNPPVVHASTVLFPDAETMAT----R----GQKYTYGTRGTPTTDALCKAIDALEGSA 80 (395)
T ss_pred ccCCcccceeeCCCCCCCCCCCccCCccCCcceecCChHHhhc----c----cCCCccCCCCChHHHHHHHHHHHHhCCC
Confidence 3345677788854 33455799999999999999999876532 1 2368999999999999999999999988
Q ss_pred eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcC
Q 013210 116 AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESI 195 (447)
Q Consensus 116 ~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~ 195 (447)
..++++||++|+++++.+++++||+||++.+.|+++...+...+++ .|+++.+++..+.+++++++ +++|++|++++|
T Consensus 81 ~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~-~Gi~v~~vd~~~~e~l~~al-~~~TklV~lesP 158 (395)
T PRK05967 81 GTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKR-LGVEVEYYDPEIGAGIAKLM-RPNTKVVHTEAP 158 (395)
T ss_pred CEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHh-cCeEEEEeCCCCHHHHHHhc-CcCceEEEEECC
Confidence 8899999999999999999999999999999999998877666666 89999999888888999999 788999999999
Q ss_pred CCCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhh
Q 013210 196 SNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ 274 (447)
Q Consensus 196 ~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~ 274 (447)
+||++.+.|+++|+++|+++|+++++|++| .++.++|.++|+|++++|++|+++|+|+.++|+++.+++.++++...+.
T Consensus 159 sNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~ 238 (395)
T PRK05967 159 GSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHG 238 (395)
T ss_pred CCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999 7777899999999999999999999999999998888877777765544
Q ss_pred hhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013210 275 GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLL 352 (447)
Q Consensus 275 ~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 352 (447)
..|..+++..|++++++++++..|++++.+++..++++|++++. +|+||+++++|+|++++++++ |+|+++
T Consensus 239 ----~~G~~~~p~da~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~---g~gg~~ 311 (395)
T PRK05967 239 ----TLGLCAGPDDTYQILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFS---GASGIF 311 (395)
T ss_pred ----HcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCC---CCceEE
Confidence 67999999999999999999999999999999999999999986 899999999999999999986 789999
Q ss_pred EEEeC-C----HHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHH
Q 013210 353 CLDME-T----EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQ 427 (447)
Q Consensus 353 ~~~l~-~----~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~ 427 (447)
+|+++ + .+.+.+|+++|+... +++|+|+.+|+++|+ . ++.+.+...|+.+++||||+| .|+.++
T Consensus 312 sf~l~~~~~~~~~~~~~f~~~l~l~~----~~~slG~~~sLi~~~-~-----~~~~~~~~~~~~~~liRlSvG-lEd~~d 380 (395)
T PRK05967 312 SFVLAAGPEKGKAKAHAFLDALEIFG----LGYSWGGYESLALHV-K-----LGDRTVAKAPYAGPVIRLQIG-LEDVPD 380 (395)
T ss_pred EEEEcCCCcccHHHHHHHHHhCCcce----EccCCCCcceeeeeC-C-----CChhHhhhccCCCCeEEEEec-cCCHHH
Confidence 99997 3 577889999999733 799999999999873 2 233333345788899999999 999999
Q ss_pred HHHHHHHHHHHhh
Q 013210 428 RWSQFEKALSRMQ 440 (447)
Q Consensus 428 ~i~~l~~al~~~~ 440 (447)
+|++|.+||+++.
T Consensus 381 Li~Dl~~Al~~~~ 393 (395)
T PRK05967 381 LKADLERGFAAAS 393 (395)
T ss_pred HHHHHHHHHHhhh
Confidence 9999999998764
No 17
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=100.00 E-value=2.3e-58 Score=458.69 Aligned_cols=386 Identities=32% Similarity=0.505 Sum_probs=342.1
Q ss_pred CCCchhhHhhhcCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCe
Q 013210 37 AWEDPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEA 116 (447)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~ 116 (447)
+++++.+.++|.......++++.+|||.+++|.+++.+.+.+.+... .+.|.|+|+.+|....+|+++|+++|++.
T Consensus 7 ~~~~~~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~Le~~lA~l~G~~~ 82 (398)
T PRK07504 7 RKWRPATRLVHSGTLRSQFGETSEALFLTQGFVYDTAEAAEARFKGE----DPGFIYSRYSNPTVDMFEKRMCALEGAED 82 (398)
T ss_pred ccCCcccceeeCCCCCCCCCCCcCCeECCCCccCCCHHHHHHHhccC----cCCceeecCCCchHHHHHHHHHHHhCCCe
Confidence 45567777777553445678899999999999999887776655443 34689999999999999999999999999
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCC
Q 013210 117 AYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESIS 196 (447)
Q Consensus 117 ~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~ 196 (447)
.+++++|+.|+..++.+++++||+|+++.+.|+++...+....++ .|+++++++..|++++++++ +++|++|++++|+
T Consensus 83 ~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~-~G~~v~~vd~~d~e~l~~ai-~~~tklV~lesp~ 160 (398)
T PRK07504 83 ARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPR-YGIESTLVDGLDLDNWEKAV-RPNTKVFFLESPT 160 (398)
T ss_pred eeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhh-cCeEEEEECCCCHHHHHHhc-CcCceEEEEECCC
Confidence 889999999999988888999999999999999988777555555 79999999988999999999 7899999999999
Q ss_pred CCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHH-HHHHHhh
Q 013210 197 NPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVN-SMMDLHQ 274 (447)
Q Consensus 197 NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~-~l~~~~~ 274 (447)
||+|.+.|+++|.++|+++|+++|+|++| .+....+.++|+|++++|+||+++++|+++||+++++++.+. .++....
T Consensus 161 NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~ 240 (398)
T PRK07504 161 NPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFR 240 (398)
T ss_pred CCCcEecCHHHHHHHHHHcCCEEEEECCccccccCCchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999 455567778899999999999999999999899988877664 3443333
Q ss_pred hhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013210 275 GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLL 352 (447)
Q Consensus 275 ~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 352 (447)
..|..+++..|+.++++++++..|++++.+++..+.++|++++. +|+||+++++|+|++++++++ |+|+++
T Consensus 241 ----~~g~~~s~~~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~---g~g~~~ 313 (398)
T PRK07504 241 ----HTGPSLSPFNAWTLLKGLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMT---GGSTLV 313 (398)
T ss_pred ----HhCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCC---CCccEE
Confidence 56788999999999999999999999999999999999999875 899999999999999999986 789999
Q ss_pred EEEeC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013210 353 CLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 431 (447)
Q Consensus 353 ~~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 431 (447)
+|+++ +.+.+.+|++.|+... +++|+|+++|++++|++++|..++++.++..|+++++||||+| .|+.+++|++
T Consensus 314 s~~~~~~~~~~~~~~~~l~~~~----~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~d 388 (398)
T PRK07504 314 AFELKGGKEAAFRFLNALKIVR----ISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAG-LEDTDDLIED 388 (398)
T ss_pred EEEeCCCHHHHHHHHHhCCcce----ecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHH
Confidence 99996 5677889999999733 7999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHhh
Q 013210 432 FEKALSRMQ 440 (447)
Q Consensus 432 l~~al~~~~ 440 (447)
|.+||++++
T Consensus 389 l~~al~~~~ 397 (398)
T PRK07504 389 LAAALKKVR 397 (398)
T ss_pred HHHHHHhhh
Confidence 999998764
No 18
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=100.00 E-value=3.7e-58 Score=457.12 Aligned_cols=381 Identities=30% Similarity=0.462 Sum_probs=340.1
Q ss_pred CCchhhHhhhcCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeE
Q 013210 38 WEDPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAA 117 (447)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~ 117 (447)
.+++.|.++|+......++++++|||.++||.+++.+.+.+.+.+. ...|.|+|+++|+++++|+++|+++|.+.+
T Consensus 13 ~~~~~t~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~----~~~~~Y~r~~~p~~~~le~~lA~l~g~~~a 88 (403)
T PRK07810 13 GVSQATIGVRGGLLRSGFEETAEALYLTSGYVYESAAAAEAAFTGE----LDRFVYSRYGNPTVSMFEERLRLIEGAEAC 88 (403)
T ss_pred cCCcchhheeCCCCCCCCCCccCCccCCCccccCCHHHHHHHhccC----cCCcceeCCCCchHHHHHHHHHHHhCCCcE
Confidence 3577788888543345578999999999999999988777776543 235889999999999999999999999999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCC
Q 013210 118 YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISN 197 (447)
Q Consensus 118 ~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~N 197 (447)
++++||+.|+..++.+++++||+|+++...|++++..+...+.+ .|+++.+++..|++++++++ +++|++|++++|+|
T Consensus 89 l~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~-~G~~v~~vd~~d~~~l~~ai-~~~tklV~~esp~N 166 (403)
T PRK07810 89 FATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPR-WGVETVFVDGEDLSQWEEAL-SVPTQAVFFETPSN 166 (403)
T ss_pred EEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHH-cCcEEEEECCCCHHHHHHhc-CcCceEEEEECCCC
Confidence 99999999999999999999999999998998887776555555 79999999999999999999 78899999999999
Q ss_pred CCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHH-HHHHHhhh
Q 013210 198 PTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVN-SMMDLHQG 275 (447)
Q Consensus 198 ptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~-~l~~~~~~ 275 (447)
|+|.+.|+++|.++|+++|+++++|++| .+....+..+|+|++++|++|+++++|+++||+++++++.+. .++....
T Consensus 167 ptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~- 245 (403)
T PRK07810 167 PMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMR- 245 (403)
T ss_pred CCCeecCHHHHHHHHHHcCCEEEEECCCCccccCChhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHH-
Confidence 9999999999999999999999999999 555667778899999999999999999999999998877654 4554433
Q ss_pred hhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013210 276 ALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLC 353 (447)
Q Consensus 276 ~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 353 (447)
..|..+++..+++++++++++..|++++.+++.++.++|++++. +|.||+++++|+|++++++++ |+|++++
T Consensus 246 ---~~g~~~s~~~a~l~l~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~---g~g~~~s 319 (403)
T PRK07810 246 ---HTGPALSAFNAWVLLKGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMS---GGGTVVT 319 (403)
T ss_pred ---HhCCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCC---CCceEEE
Confidence 56778999999999999999999999999999999999999876 899999999999999999986 7899999
Q ss_pred EEeCC-----HHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHH
Q 013210 354 LDMET-----EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQR 428 (447)
Q Consensus 354 ~~l~~-----~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~ 428 (447)
|++++ .+.+.+|+++|+.. . +++|+|+.+|++++|+.++|..++.+.+..+|+++++||||+| .|+.+++
T Consensus 320 ~~l~~~~~~~~~~~~~f~~~l~l~---~-~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svG-lE~~~dl 394 (403)
T PRK07810 320 FELDAPEDAAKKRAFEVLDKLRVI---D-ISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVG-LEDTDDL 394 (403)
T ss_pred EEEcCCCCcCHHHHHHHHHhCCce---E-EeccCCCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHH
Confidence 99974 46678999999973 3 7999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHH
Q 013210 429 WSQFEKAL 436 (447)
Q Consensus 429 i~~l~~al 436 (447)
|++|.+||
T Consensus 395 i~dl~~Al 402 (403)
T PRK07810 395 IADLDRAL 402 (403)
T ss_pred HHHHHHhh
Confidence 99999997
No 19
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=3.3e-58 Score=459.24 Aligned_cols=390 Identities=28% Similarity=0.410 Sum_probs=337.0
Q ss_pred CCCchhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC
Q 013210 37 AWEDPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE 115 (447)
Q Consensus 37 ~~~~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~ 115 (447)
+.+++.+.++|+. .....+|+++||||.|+||.+++++++.+.+... ...+.|+|..+|+++.+|+++|+++|++
T Consensus 10 ~~~~~~t~~~~~~~~~~~~~~~~~~Pi~~sstf~~~~~~~~~~~~~~~----~~~~~Y~r~~~pt~~~le~~la~l~g~~ 85 (437)
T PRK05613 10 DQWGFETRSIHAGQSVDSDTSARNLPIYQTTSYVFDSAEHAKQRFALE----DLGPIYSRLTNPTVEALENRIASLEGGV 85 (437)
T ss_pred ccCCcchHheeCCCCCCCCCCCccCCEeCCCCcccCCHHHHHHhhccc----cCCceeeCccChHHHHHHHHHHHHhCCC
Confidence 3445677778855 3344579999999999999999987776655432 2358899999999999999999999999
Q ss_pred eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC-CCCHHHHHHhhccCCceEEEEEc
Q 013210 116 AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD-ISDHEMVNSAIVQGRTKVLYFES 194 (447)
Q Consensus 116 ~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~i~~~~t~lV~i~~ 194 (447)
..++++||++|+.+++.+++++||+||++..+|+++...+...+.+ .|+++++++ ..|++++++++ +++|++|++++
T Consensus 86 ~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~-~Gi~v~~vd~~~d~e~l~~~l-~~~tk~V~~e~ 163 (437)
T PRK05613 86 HAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNR-LGIEVTFVENPDDPESWQAAV-QPNTKAFFGET 163 (437)
T ss_pred eEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHh-cCeEEEEECCCCCHHHHHHhC-CccCeEEEEEC
Confidence 9999999999999999998999999999999999997666555555 799999997 45899999999 78899999999
Q ss_pred CCCCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHH-------
Q 013210 195 ISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLV------- 266 (447)
Q Consensus 195 ~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~------- 266 (447)
+.||+|.++|+++|+++|+++|+++|+|+++ .+..+++.++|+|++++|+||+++|+|+.+||+++.+.++.
T Consensus 164 ~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~ 243 (437)
T PRK05613 164 FANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDG 243 (437)
T ss_pred CCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccccChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccc
Confidence 9999999999999999999999999999999 55567888899999999999999999988889888532210
Q ss_pred -----------------------H-H-HHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCC
Q 013210 267 -----------------------N-S-MMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLG 321 (447)
Q Consensus 267 -----------------------~-~-l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~ 321 (447)
+ . +.+.+.......|..+++..|++++++++++..|++++.+++..++++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp 323 (437)
T PRK05613 244 KPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHE 323 (437)
T ss_pred cccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 0 0 00111112336799999999999999999999999999999999999999998
Q ss_pred C--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCC
Q 013210 322 L--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSS 398 (447)
Q Consensus 322 ~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~ 398 (447)
. +|.||+++++|+|+++++++.. |+|++++|+++ +.+.+.+|++.|+... +++|+|+.+|++++|++++|.
T Consensus 324 ~V~~V~yPgl~~~p~~~~~~~~~~~--g~gg~~sf~l~~~~~~~~~f~~~l~l~~----~~~slG~~~sLv~~p~~~~h~ 397 (437)
T PRK05613 324 KVAKVNFAGLKDSPWYATKEKLGLK--YTGSVLSFDIKGGKDEAWAFIDALKLHS----NLANIGDVRSLVVHPATTTHS 397 (437)
T ss_pred CcceEECCCCCCCccHHHHHHhcCC--CCceEEEEEecCCHHHHHHHHHhCCcce----EccCCCCCchhhcCCCccCCc
Confidence 6 8999999999999999998642 68999999997 5577889999999743 799999999999999999999
Q ss_pred CCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 399 ELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 399 ~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
.++.++++.+|+++++||||+| .|+.+++|++|.+||+++
T Consensus 398 ~~~~~~~~~~Gi~~~liRlsvG-lE~~~dLi~Dl~~Al~~~ 437 (437)
T PRK05613 398 QSDEAGLARAGITQATVRLSVG-IEDIDDIIADLEGGFAAI 437 (437)
T ss_pred cCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999 999999999999999863
No 20
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=4.7e-58 Score=458.54 Aligned_cols=387 Identities=31% Similarity=0.465 Sum_probs=336.1
Q ss_pred hhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEE
Q 013210 41 PAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (447)
Q Consensus 41 ~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~ 119 (447)
+.+.++|.. .....++++++|||.++||.+++.+++.+.+.+. ...|.|+|..+|+...++++||+++|.+.+++
T Consensus 3 ~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~----~~~~~y~r~~~pt~~~Le~~lA~l~g~~~~l~ 78 (425)
T PRK06084 3 LETLAIHAGYSPDPTTKAVAVPIYQTTSYAFDDTQHGADLFDLK----VPGNIYTRIMNPTNDVLEQRVAALEGGVGALA 78 (425)
T ss_pred cchhheeCCcCCCCCCCCccCCEeCCCCcccCCHHHHHHhhccc----cCCccccCCCCchHHHHHHHHHHHhCCCceeE
Confidence 345566643 3344568999999999999999998887776543 23589999999999999999999999999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCC
Q 013210 120 TASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPT 199 (447)
Q Consensus 120 tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Npt 199 (447)
++||++|+.+++.+++++||+|+++.+.|+++...+...++. .|+++.+++..|++++++++ +++|++|++++|+||+
T Consensus 79 ~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~-~gi~v~~~d~~d~e~le~ai-~~~tklV~lesp~NPt 156 (425)
T PRK06084 79 VASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPR-IGIETRFAAHDDIAALEALI-DERTKAVFCESIGNPA 156 (425)
T ss_pred ehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhccc-ceeEEEEECCCCHHHHHHHh-ccCCcEEEEeCCCCCC
Confidence 999999999999999999999999999999888877666655 78999999988999999999 7789999999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHH--HH---------
Q 013210 200 LAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANL--VN--------- 267 (447)
Q Consensus 200 G~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~--~~--------- 267 (447)
|.+.|+++|.++|+++|+++|+|++| .+....+..+|+|++++|+||+++++|+++||+++.+..+ ..
T Consensus 157 G~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~ 236 (425)
T PRK06084 157 GNIIDIQALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLN 236 (425)
T ss_pred CeecCHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccc
Confidence 99999999999999999999999999 5666778888999999999999999999999988763321 00
Q ss_pred -------------------HHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeC
Q 013210 268 -------------------SMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLY 326 (447)
Q Consensus 268 -------------------~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~ 326 (447)
.+...+.......|..+++..|++++++++++..|++++.+++..++++|++++. +|.|
T Consensus 237 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~y 316 (425)
T PRK06084 237 TPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKY 316 (425)
T ss_pred cCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEEC
Confidence 0001111112357889999999999999999999999999999999999999986 8999
Q ss_pred CCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHH
Q 013210 327 PGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEK 405 (447)
Q Consensus 327 p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~ 405 (447)
|+++++|+|.++++++.+ |+|++++|++. +.+.+.+|++.|+... +++|+|+++|++++|+.++|..++++.+
T Consensus 317 P~l~~~p~~~~~~~~~~g--~~gg~~s~~~~~~~~~~~~f~~~l~l~~----~~~slG~~~slv~~p~~~~h~~~~~~~~ 390 (425)
T PRK06084 317 AGLPDHPEHELARRYMGG--KPASILSFGIKGGQAAGARFIDALKLVV----RLVNIGDAKSLACHPASTTHRQLNDEEL 390 (425)
T ss_pred CCCCCcccHHHHHHhCCC--CcceEEEEEecCCHHHHHHHHHhCCcce----eccccCCCceeeeCCCcCCcccCCHHHH
Confidence 999999999999999862 37999999997 4456789999999743 7999999999999999999999999999
Q ss_pred HhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 406 ALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 406 ~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
+.+|+++++||||+| .||.+++|++|.+||++.+
T Consensus 391 ~~~gi~~~liR~svG-lEd~~dLi~dl~~Al~~~~ 424 (425)
T PRK06084 391 EKAGVSRDMVRLSIG-IEHIDDIIADLAQALDASK 424 (425)
T ss_pred HhcCCCCCeEEEEec-cCCHHHHHHHHHHHHHhhh
Confidence 999999999999999 9999999999999998764
No 21
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=4.3e-58 Score=454.14 Aligned_cols=374 Identities=30% Similarity=0.432 Sum_probs=331.3
Q ss_pred hhhHhhh-cCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEE
Q 013210 41 PAAALAS-ARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (447)
Q Consensus 41 ~~~~~~~-~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~ 119 (447)
+.+.++| |......+|+++|||+.++||.+++.++ ...|.|+|+.+|+.+.++++||+++|.+.+++
T Consensus 5 ~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~------------~~~~~Y~R~~~pt~~~L~~~lA~l~g~~~~i~ 72 (386)
T PRK08045 5 QATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNE------------PRAHDYSRRGNPTRDVVQRALAELEGGAGAVL 72 (386)
T ss_pred cccceeEcCCCCCCCCCCccCCccCCcceecCCccc------------cCCceeeCCCCccHHHHHHHHHHHhCCCeEEE
Confidence 4455566 4333455799999999999999987531 12588999999999999999999999989999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCC
Q 013210 120 TASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPT 199 (447)
Q Consensus 120 tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Npt 199 (447)
|+||++|+.+++.+++++||+|+++.+.|++++..+..+... .++++.+++..|++++++++ +++|++|++++|+|||
T Consensus 73 ~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~-~gi~v~~vd~~d~e~l~~~l-~~~tklV~l~sP~NPt 150 (386)
T PRK08045 73 TNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKR-GCYRVLFVDQGDEQALRAAL-AEKPKLVLVESPSNPL 150 (386)
T ss_pred ECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhh-CCeEEEEeCCCCHHHHHHhc-ccCCeEEEEECCCCCC
Confidence 999999999999999999999999999999888777555544 56788888877999999999 7789999999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhh
Q 013210 200 LAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGAL 277 (447)
Q Consensus 200 G~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~ 277 (447)
|.+.|+++|.++|+++|+++++|++| .+....+..+++|++++|+||+++++++.++|+++. ++++++.+...+.
T Consensus 151 G~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~--- 227 (386)
T PRK08045 151 LRVVDIAKICHLAREAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWAN--- 227 (386)
T ss_pred CEecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHH---
Confidence 99999999999999999999999999 555567788899999999999999888777788866 6778787776555
Q ss_pred hhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013210 278 MLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 355 (447)
Q Consensus 278 ~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 355 (447)
..|..+++..+++++++++++..|++++.+++..++++|++++. +|+||+++++|+|++++++++ |+|++++|.
T Consensus 228 -~~g~~~~p~~~~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~---g~g~~~s~~ 303 (386)
T PRK08045 228 -NIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQK---GFGAMLSFE 303 (386)
T ss_pred -hcCCCCCHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCC---CCCceEEEE
Confidence 67888999999999999999999999999999999999999986 899999999999999999985 789999999
Q ss_pred eC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 013210 356 ME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEK 434 (447)
Q Consensus 356 l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~ 434 (447)
++ +.+.+.+|++.|+... +++|+|+.+|++++|+.++|..++++.+..+|+++++||||+| .|+.+++|++|.+
T Consensus 304 ~~~~~~~~~~f~~~l~~~~----~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~dl~~ 378 (386)
T PRK08045 304 LDGDEQTLRRFLGGLSLFT----LAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTG-IEDGEDLIADLEN 378 (386)
T ss_pred ecCcHHHHHHHHHhcccee----EeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeC-cCCHHHHHHHHHH
Confidence 97 4566789999999733 7999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHhh
Q 013210 435 ALSRMQ 440 (447)
Q Consensus 435 al~~~~ 440 (447)
||+++.
T Consensus 379 al~~~~ 384 (386)
T PRK08045 379 GFRAAN 384 (386)
T ss_pred HHHHhh
Confidence 998764
No 22
>PRK05939 hypothetical protein; Provisional
Probab=100.00 E-value=1e-57 Score=452.74 Aligned_cols=371 Identities=30% Similarity=0.530 Sum_probs=328.6
Q ss_pred CCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHH
Q 013210 53 GEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLM 132 (447)
Q Consensus 53 ~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~ 132 (447)
..+|+++|||+.++||.+++.+++.+.+.+. ...|.|+|.++|+++.+|++||+++|++..+.++||++|+..++.
T Consensus 5 ~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~----~~~~~Y~r~g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~ 80 (397)
T PRK05939 5 IEHGAVHKPIHTSVTYGYEDARDLIDVFQGK----KPGFTYARQGTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFL 80 (397)
T ss_pred CCCCCccCCccCCCCeecCCHHHHHHhhcCC----cCCCCcCCCCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHH
Confidence 3458999999999999999988888877653 235899999999999999999999999999999999999999999
Q ss_pred HhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHH
Q 013210 133 QLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLA 212 (447)
Q Consensus 133 ~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la 212 (447)
+++++||+|+++.+.|+++...+.. +.+ .|+++++++..|+++|++++ +++|++|++++|+||+|.+.|+++|+++|
T Consensus 81 all~~Gd~Vv~~~~~y~~t~~~~~~-l~~-~G~~v~~v~~~d~e~l~~~l-~~~tklV~vesp~NptG~v~dl~~I~~la 157 (397)
T PRK05939 81 TLLRAGDHLVSSQFLFGNTNSLFGT-LRG-LGVEVTMVDATDVQNVAAAI-RPNTRMVFVETIANPGTQVADLAGIGALC 157 (397)
T ss_pred HHcCCCCEEEECCCccccHHHHHHH-HHh-cCCEEEEECCCCHHHHHHhC-CCCCeEEEEECCCCCCCCHHhHHHHHHHH
Confidence 9999999999999999988776633 344 79999999999999999999 88999999999999999999999999999
Q ss_pred HhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChH--------HHHH----------HHHHh
Q 013210 213 HDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAN--------LVNS----------MMDLH 273 (447)
Q Consensus 213 ~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~--------~~~~----------l~~~~ 273 (447)
+++|+++|+|++| .+..+++..+|+|+++.|+||+++++|+++||+++.+.. +... +...+
T Consensus 158 ~~~gi~livD~t~a~~~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (397)
T PRK05939 158 RERGLLYVVDNTMTSPWLFRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIR 237 (397)
T ss_pred HHcCCEEEEECCcccccccCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHH
Confidence 9999999999999 666778888899999999999999999999887764321 1111 11222
Q ss_pred hhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcE
Q 013210 274 QGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGL 351 (447)
Q Consensus 274 ~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~ 351 (447)
.......|..+++..+++++++++++..|++++.+++..++++|++++. +|.||+++++|+|+++++++. |+|++
T Consensus 238 ~~~~~~~G~~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~---g~g~l 314 (397)
T PRK05939 238 KKGLRDMGATLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFR---HYGGL 314 (397)
T ss_pred HHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhcc---CCceE
Confidence 2222357899999999999999999999999999999999999999986 899999999999999999985 78999
Q ss_pred EEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013210 352 LCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 431 (447)
Q Consensus 352 ~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 431 (447)
++|++++.+.+.+|++.|+... +++|+|+++|++++|+.++|..++.+.++.+|+++++||||+| .||++++|++
T Consensus 315 ~sf~~~~~~~~~~f~~~l~l~~----~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svG-lEd~~dLi~d 389 (397)
T PRK05939 315 LSFELADGIDCFDFLNRLKLVI----KATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVG-IEDEADLIAD 389 (397)
T ss_pred EEEEeCCHHHHHHHHHhCCcce----EccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeC-CCCHHHHHHH
Confidence 9999986667889999998632 6999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHH
Q 013210 432 FEKALSR 438 (447)
Q Consensus 432 l~~al~~ 438 (447)
|.+||++
T Consensus 390 l~~Al~~ 396 (397)
T PRK05939 390 FEQALDA 396 (397)
T ss_pred HHHHHhc
Confidence 9999974
No 23
>PRK07049 methionine gamma-lyase; Validated
Probab=100.00 E-value=2.2e-57 Score=454.41 Aligned_cols=389 Identities=26% Similarity=0.405 Sum_probs=337.0
Q ss_pred CCCCchhhHhhhcCC-CCCCCCccccccccccccccCCHHHHHHhhcCCCCC------CCCCccccCCCCchHHHHHHHH
Q 013210 36 AAWEDPAAALASARH-EFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGP------DRDFFIYSRHFNPTVLNLSRQM 108 (447)
Q Consensus 36 ~~~~~~~~~~~~~~~-~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~------~~~~~~~~r~~~~~~~~l~~~i 108 (447)
.+.+++.+.++|+.. ....+|+++||||.+|||.+++.+++.+.+....+. ....|.|+|+.+|+...|++.|
T Consensus 13 ~~~~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~R~~~Pt~~~Le~~l 92 (427)
T PRK07049 13 NRELHPETQMLNYGYDPELSEGAVKPPVFLTSTFVFRSAEDGRDFFDYVSGRKEPPAGEGAGLVYSRFNHPNSEIVEDRL 92 (427)
T ss_pred CCcCCcccceeeCCCCCCCCCCCccCCccCccceecCChHHHHhhhhccccccccccccccCccccCCCCcCHHHHHHHH
Confidence 344566777787543 333479999999999999999998888776543221 1235889999999999999999
Q ss_pred HHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCee-EEEeCCCCHHHHHHhhc----
Q 013210 109 AALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNIT-TTFVDISDHEMVNSAIV---- 183 (447)
Q Consensus 109 a~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~-~~~v~~~d~~~l~~~i~---- 183 (447)
|+++|.+.+++++||++|+.+++.+++++||+|+++.|.|+++...+...+.. .|++ +.+.+..|++++++++.
T Consensus 93 A~leg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~-~Gi~~v~~~~~~d~~~l~~~l~~~~~ 171 (427)
T PRK07049 93 AVYEGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRN-FGVGAVGFADGLSEAAIGAAAEAAAA 171 (427)
T ss_pred HHHhCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHh-cCcEEEEEeCCCCHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999998876555554 6887 44444557888877662
Q ss_pred cCCceEEEEEcCCCCCccccCHHHHHHHHHh------cCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccC-CCCee
Q 013210 184 QGRTKVLYFESISNPTLAVANIPELSRLAHD------KGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISG-GADII 255 (447)
Q Consensus 184 ~~~t~lV~i~~~~NptG~v~~l~~I~~la~~------~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~-~g~~i 255 (447)
++++++|++++|+||||.+.|+++|.++++. +++++++|++| +++...+...++|+++.|+||++|+ +|.|+
T Consensus 172 ~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~~g~divv~S~SK~~gG~~glr~ 251 (427)
T PRK07049 172 KGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEHGADLSVYSLTKYVGGHSDLVA 251 (427)
T ss_pred CCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccccCCCEEEEcCceeecCCCCcEE
Confidence 2579999999999999999999999999987 89999999998 6666677788999999999999996 67765
Q ss_pred EEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCC--CC
Q 013210 256 AGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGL--ED 331 (447)
Q Consensus 256 gG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~--~~ 331 (447)
|++++++++++.+...+. ..|..+++..++++++.++++..|++++.++++.+.++|++++. +|+||++ ++
T Consensus 252 -G~vv~~~~l~~~l~~~~~----~~g~~ls~~~a~l~~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~ 326 (427)
T PRK07049 252 -GAVLGRKALIRQVRALRS----AIGTQLDPHSCWMLGRSLETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPD 326 (427)
T ss_pred -EEEECCHHHHHHHHHHHH----hcCCCCCHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCC
Confidence 999999999988887766 66888999999999999999999999999999999999999975 8999985 99
Q ss_pred CchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCC
Q 013210 332 HPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGI 410 (447)
Q Consensus 332 ~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~ 410 (447)
+|+|++++++++ |+|++++|+++ +.+.+.+|++.|+.. . +++|+|+.+|++++|+.++|..++.+.+..+|+
T Consensus 327 ~~~~~~~~~~~~---g~g~~~s~~~~~~~~~~~~f~~~l~l~---~-~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi 399 (427)
T PRK07049 327 SAYGAVYKRQCT---GAGSTFSFDIKGGQAAAFRFLNALQIF---K-LAVSLGGTESLASHPASMTHSGVPADVRERIGV 399 (427)
T ss_pred CccHHHHHhhCC---CCccEEEEEEcCCHHHHHHHHHcCccc---E-EcccCCCCCceeeCCCccccccCCHHHHHhcCC
Confidence 999999999985 78999999997 456688999999973 3 799999999999999999999999999999999
Q ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 411 SAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 411 ~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
++++||||+| .|+.+++|++|.+||++
T Consensus 400 ~~~liR~svG-lE~~~dl~~dl~~al~~ 426 (427)
T PRK07049 400 LESTIRLSIG-IEHPDDLIADLAQALDA 426 (427)
T ss_pred CcCeEEEEeC-cCCHHHHHHHHHHHHhc
Confidence 9999999999 99999999999999974
No 24
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.5e-57 Score=450.48 Aligned_cols=377 Identities=29% Similarity=0.470 Sum_probs=330.7
Q ss_pred hhhHhhhcCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEe
Q 013210 41 PAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCT 120 (447)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~t 120 (447)
..+.++|+......+++++||||.++||.+++.+. +.+. ...|.|+|..+|.++++|+.+|+++|++.+++|
T Consensus 3 ~~t~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~----~~~~----~~~~~y~r~~np~~~~lE~~lA~l~g~~~~l~~ 74 (385)
T PRK08574 3 RGTDAVRGYRGSDPYGSLQPPIYLTALFRQEGEAY----PSDR----GFDLKYSREENPTLRPLEEALAKLEGGVDALAF 74 (385)
T ss_pred ccceeeecCCCCCCCCCccCCccCCcceecCcchh----hcCC----cCCceEECCCCccHHHHHHHHHHHhCCCcEEEe
Confidence 34555665433345789999999999998876522 2221 235889999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccC-CceEEEEEcCCCCC
Q 013210 121 ASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQG-RTKVLYFESISNPT 199 (447)
Q Consensus 121 sggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-~t~lV~i~~~~Npt 199 (447)
+||++|+..++.+++++||+|+++.+.|+++...+... .. .|+++.+++. |++++++++ ++ +|++|++++|+||+
T Consensus 75 ~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~-~~-~g~~v~~~~~-d~~~l~~~i-~~~~tklV~ie~p~NPt 150 (385)
T PRK08574 75 NSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSL-EK-FGVKVVLAYP-STEDIIEAI-KEGRTKLVFIETMTNPT 150 (385)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHh-hc-cCcEEEEECC-CHHHHHHhc-CccCceEEEEECCCCCC
Confidence 99999999999999999999999999999998877543 44 7888888765 689999999 65 89999999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEE-EcChHHHHHHHHHhhhhh
Q 013210 200 LAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAV-CGPANLVNSMMDLHQGAL 277 (447)
Q Consensus 200 G~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l-~~~~~~~~~l~~~~~~~~ 277 (447)
|.+.|+++|+++|+++|+++++|++| .++.+.+...|+|++++|+||+++++|+++||++ +.+++++++++..+.
T Consensus 151 G~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~--- 227 (385)
T PRK08574 151 LKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRR--- 227 (385)
T ss_pred CEecCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHH---
Confidence 99999999999999999999999999 6666778888999999999999999998888955 557888888876665
Q ss_pred hhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013210 278 MLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 355 (447)
Q Consensus 278 ~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 355 (447)
..|..+++..|+.++++++++..|+++..+++.++.++|++++. +|+||+++++|+|+++++++++ .|+|++++|+
T Consensus 228 -~~g~~~~p~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~-~g~g~~~s~~ 305 (385)
T PRK08574 228 -RLGTIMQPFEAYLVLRGLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGK-DLYGGVVSFR 305 (385)
T ss_pred -hcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCC-CCcceEEEEE
Confidence 56888889999999999999999999999999999999999876 8999999999999999999852 2689999999
Q ss_pred eC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 013210 356 ME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEK 434 (447)
Q Consensus 356 l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~ 434 (447)
++ +.+.+.+|+++|+... +++|+|+.+|++++|++++|..++++.++.+|+++++||||+| .|+.+++|++|.+
T Consensus 306 l~~~~~~~~~~~~~l~l~~----~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dli~dl~~ 380 (385)
T PRK08574 306 VKGGRDAVLKFLRSLKLIK----PSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVG-LEDVEDLIEDLDQ 380 (385)
T ss_pred eCCCHHHHHHHHHcCCcce----EccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHHH
Confidence 96 5677899999999733 7999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHh
Q 013210 435 ALSRM 439 (447)
Q Consensus 435 al~~~ 439 (447)
||+++
T Consensus 381 al~~~ 385 (385)
T PRK08574 381 ALGSI 385 (385)
T ss_pred HHhcC
Confidence 99764
No 25
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=100.00 E-value=1.7e-57 Score=450.68 Aligned_cols=374 Identities=35% Similarity=0.554 Sum_probs=334.5
Q ss_pred hhhcCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChH
Q 013210 45 LASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGM 124 (447)
Q Consensus 45 ~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt 124 (447)
++|+......++++.+|||.++||.+++.+++.+.+.+. ...|.|+|+.+|...++++.+|+++|++.+++++||+
T Consensus 4 ~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~le~~la~l~g~~~~~~~~sG~ 79 (380)
T TIGR01325 4 AIRGGKERTEFREHAEALFLTSSFVYDSAAHAADRFAGE----IPGFVYSRYANPTVAAFEERIAALEGAERAVATATGM 79 (380)
T ss_pred eEECCCCCCCCCCccCCeeCCcceecCCHHHHHHhhccc----cCCcceecCCCchHHHHHHHHHHHhCCCcEEEECCHH
Confidence 445433335578899999999999999887666666543 2358899999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccC
Q 013210 125 SAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN 204 (447)
Q Consensus 125 ~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~ 204 (447)
+|+.+++.+++++||+|+++.+.|+++...+...+.+ .|+++.+++.+|++++++++ ++++++|++++|+||+|.+.|
T Consensus 80 ~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~-~g~~v~~v~~~d~~~l~~~i-~~~tklV~le~p~np~g~~~d 157 (380)
T TIGR01325 80 SAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPR-FGIEVSFVDPTDLNAWEAAV-KPNTKLVFVETPSNPLGELVD 157 (380)
T ss_pred HHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHH-hCCEEEEECCCCHHHHHHhc-CCCceEEEEECCCCCCCeeeC
Confidence 9999999999999999999999998887776555555 79999999999999999999 778999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCC
Q 013210 205 IPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPT 283 (447)
Q Consensus 205 l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~ 283 (447)
+++|.++|+++|+++|+|++| .+....+..+|+|+++.|+||+++++|.++||++++++++++.++.... ..|..
T Consensus 158 l~~I~~la~~~gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~----~~g~~ 233 (380)
T TIGR01325 158 IAALAELAHAIGALLVVDNVFATPVLQQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLR----HTGPA 233 (380)
T ss_pred HHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHH----hhCCC
Confidence 999999999999999999999 4555677788999999999999999999999999999888888876554 56778
Q ss_pred ccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHH
Q 013210 284 MNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEK 361 (447)
Q Consensus 284 ~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~ 361 (447)
+++..++.++++++++..|++++.+++..+.++|++++. +|.||+++++|+|+++++++. |+|++++|++++.+.
T Consensus 234 ~~p~~a~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~---g~g~~~s~~l~~~~~ 310 (380)
T TIGR01325 234 MSPFNAWVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQS---GGGTVIGFDVADRAA 310 (380)
T ss_pred CCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCC---CCceEEEEEECCHHH
Confidence 888889999999999999999999999999999999975 899999999999999999985 789999999987777
Q ss_pred HHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013210 362 ANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 436 (447)
Q Consensus 362 ~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 436 (447)
+.+|++.|+... +++|+|+++|++.+|++++|..++++.+...|+++++||||+| .|+.+++|++|.+||
T Consensus 311 ~~~f~~~l~~~~----~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~dl~~al 380 (380)
T TIGR01325 311 AWKVLDAVELVS----ITNNLGDAKSTITHPATTTHGRMQPEERAAAGIGDGLVRLSVG-LEDVDDLIADLKRAL 380 (380)
T ss_pred HHHHHHcCCcce----EcccCCCCCeeeeCCCccCcccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHHhhC
Confidence 899999999733 7999999999999999999999999999999999999999999 999999999999986
No 26
>PRK07503 methionine gamma-lyase; Provisional
Probab=100.00 E-value=5.8e-57 Score=449.32 Aligned_cols=384 Identities=36% Similarity=0.529 Sum_probs=340.5
Q ss_pred chhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEE
Q 013210 40 DPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (447)
Q Consensus 40 ~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~ 118 (447)
++.+.++|+. ...+.+|+++|||+.++||.+++.+++.+.+.+. ...|.|+|+.+|.++.+|+.+|+++|++..+
T Consensus 9 ~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i 84 (403)
T PRK07503 9 GFSTRAIHHGYDPLDHGGALVPPVYLTATFAFPTAEYGAECFAGE----EEGHFYSRISNPTLALLEQRMASLEGGEAAV 84 (403)
T ss_pred CccchheeCCCCCCCCCCCccCCcccCcceecCChHHHHHhhccc----cCCceeeCCCCchHHHHHHHHHHHhCCCcEE
Confidence 4556667744 3445579999999999999999998888887654 3468999999999999999999999999999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCC
Q 013210 119 CTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNP 198 (447)
Q Consensus 119 ~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Np 198 (447)
+++||++|+.+++.+++++||+|+++.+.|+++...+...+.. .|+++.+++.+|++++++++ +++|++|++++|+||
T Consensus 85 ~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~-~G~~v~~vd~~d~~~l~~~i-~~~tklV~le~p~NP 162 (403)
T PRK07503 85 ALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGE-FGVTVRHVDLTDPAALKAAI-SDKTRMVYFETPANP 162 (403)
T ss_pred EEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhh-CCEEEEEeCCCCHHHHHHhc-CccCcEEEEeCCCCC
Confidence 9999999999999999999999999999998877666555555 79999999999999999999 778999999999999
Q ss_pred CccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHH--hhh
Q 013210 199 TLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDL--HQG 275 (447)
Q Consensus 199 tG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~--~~~ 275 (447)
+|.+.|+++|.++|+++|+++|+|++| .+....+..+++|++++|+||+++++|+++||+++.+++++++++.. +.
T Consensus 163 tG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~- 241 (403)
T PRK07503 163 NMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKD- 241 (403)
T ss_pred CCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHh-
Confidence 999999999999999999999999999 44455666779999999999999999877789999988888887643 32
Q ss_pred hhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013210 276 ALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLC 353 (447)
Q Consensus 276 ~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 353 (447)
..|..+++..|+++++.++++..|++++.+++..+.++|++++. .|.||+++++|+|++++++++ |+|++++
T Consensus 242 ---~~g~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~---~~g~~~s 315 (403)
T PRK07503 242 ---MTGAVMSPFDAFLLMRGLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMA---LPGGMIA 315 (403)
T ss_pred ---CcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCC---CCCceEE
Confidence 45788899999999999999999999999999999999999875 789999999999999999875 6899999
Q ss_pred EEeC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHH
Q 013210 354 LDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQF 432 (447)
Q Consensus 354 ~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l 432 (447)
|.++ +.+.+.+|++.|+.. . +++|+|+++|++++|.+.+|..+++++++.+|+++++||||+| .|+.+++|++|
T Consensus 316 ~~~~~~~~~~~~~~~~l~l~---~-~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~dl 390 (403)
T PRK07503 316 FELKGGIAAGRRFMNALQLF---A-RAVSLGDAESLAQHPASMTHSTYTPEERAEHGISEGLVRLSVG-LEDVADILADL 390 (403)
T ss_pred EEECCCHHHHHHHHHhCCcc---e-eecccCCCCccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEe-cCCHHHHHHHH
Confidence 9997 556678999999863 3 6899999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHhhh
Q 013210 433 EKALSRMQD 441 (447)
Q Consensus 433 ~~al~~~~~ 441 (447)
.+||+++..
T Consensus 391 ~~Al~~~~~ 399 (403)
T PRK07503 391 AQALDACAV 399 (403)
T ss_pred HHHHHHHHH
Confidence 999998754
No 27
>PRK06234 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.2e-56 Score=447.10 Aligned_cols=388 Identities=39% Similarity=0.545 Sum_probs=342.3
Q ss_pred CCCCchhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCC
Q 013210 36 AAWEDPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGT 114 (447)
Q Consensus 36 ~~~~~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~ 114 (447)
++++++.+.++|.. .....++++++|++.++||.+++.+++.+.+... ..++.|+|+.+|...+||+.||+++|.
T Consensus 4 ~~~~~~~t~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~r~~~p~~~~Le~~iA~~~g~ 79 (400)
T PRK06234 4 IKKMGFATKAIHGGHIGDKQFGSLATPIYQTSTFIFDSAEQGGRRFAGE----ESGYIYSRLGNPTSTEVENKLALLEGG 79 (400)
T ss_pred cccCCccchheECCCCCCCCCCCccCCcccccceecCChHHHHHhhccC----cCCCcccCCCCccHHHHHHHHHHHhCC
Confidence 45556667777744 3345579999999999999999987776666442 235779999999999999999999999
Q ss_pred CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEc
Q 013210 115 EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFES 194 (447)
Q Consensus 115 ~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~ 194 (447)
+.+++++||++|+.+++.+++++||+|+++.+.|+.+...+...+.. .|+++++++..|++++++++ +++|++|++++
T Consensus 80 ~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~-~G~~v~~vd~~d~e~l~~~i-~~~tklI~ies 157 (400)
T PRK06234 80 EAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTR-YGVEVTFVDTSNLEEVRNAL-KANTKVVYLET 157 (400)
T ss_pred CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhh-CCeEEEEECCCCHHHHHHHh-ccCCeEEEEEC
Confidence 99999999999999999999999999999999999888776555555 79999999999999999999 78899999999
Q ss_pred CCCCCccccCHHHHHHHHHhc--CCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHH
Q 013210 195 ISNPTLAVANIPELSRLAHDK--GVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMD 271 (447)
Q Consensus 195 ~~NptG~v~~l~~I~~la~~~--gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~ 271 (447)
|+||+|.+.|+++|.++|+++ |+++++|++| .+....+...++|++++|+||+++++|+++||++++++++++.++.
T Consensus 158 P~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~ 237 (400)
T PRK06234 158 PANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKL 237 (400)
T ss_pred CCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHH
Confidence 999999999999999999997 9999999999 4444566777999999999999999999888999999988887764
Q ss_pred HhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcC
Q 013210 272 LHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFG 349 (447)
Q Consensus 272 ~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g 349 (447)
.... ...|..+++..++..+++++++..|++++.+++.++.++|++++. +|+||+++++|+|++++++++ |+|
T Consensus 238 ~~~~--~~~g~~l~p~~a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~---~~g 312 (400)
T PRK06234 238 FGIK--DMTGSVIGPFEAFLIIRGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMS---LPG 312 (400)
T ss_pred HHHH--HhcCCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCC---CCC
Confidence 3211 145788899999999999999999999999999999999999876 899999999999999999886 689
Q ss_pred cEEEEEeC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHH
Q 013210 350 GLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQR 428 (447)
Q Consensus 350 ~~~~~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~ 428 (447)
++++|+++ +.+.+.+|++.|+.. + +++|+|+++|++++|++++|..++++.++..|+++++||||+| .|+.+++
T Consensus 313 ~l~s~~l~~~~~~~~~f~~~l~~~---~-~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG-lE~~~dl 387 (400)
T PRK06234 313 AMISFELKGGVEEGKVVMNNVKLA---T-LAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVG-LEDVDDI 387 (400)
T ss_pred ceEEEEecCcHHHHHHHHHhCCcc---e-EeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeC-CCCHHHH
Confidence 99999997 456688999999974 3 7999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHh
Q 013210 429 WSQFEKALSRM 439 (447)
Q Consensus 429 i~~l~~al~~~ 439 (447)
|++|.+||+++
T Consensus 388 ~~dl~~al~~~ 398 (400)
T PRK06234 388 IADLKQALDLI 398 (400)
T ss_pred HHHHHHHHHHH
Confidence 99999999875
No 28
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=100.00 E-value=5.8e-57 Score=445.58 Aligned_cols=372 Identities=33% Similarity=0.536 Sum_probs=329.7
Q ss_pred hhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEE
Q 013210 41 PAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (447)
Q Consensus 41 ~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~ 119 (447)
+.+.++|.. .....+|+++||||.++||.+++.. . ...|.|+|..+|++..|++++|+++|++.+++
T Consensus 3 ~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~--------~----~~~~~y~r~~~p~~~~Le~~la~l~g~~~al~ 70 (380)
T PRK06176 3 MQTKLIHGGISEDTTTGAVSVPIYQTSTYRQDAIG--------R----PKGYEYSRSGNPTRFALEELIADLEGGVKGFA 70 (380)
T ss_pred ccceeeECCCCCCCCCCCccCCcccCCceecCCCC--------C----cCCCcccCCCChhHHHHHHHHHHHhCCCCEEE
Confidence 445556643 3334478999999999999888731 1 23589999999999999999999999999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCC
Q 013210 120 TASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPT 199 (447)
Q Consensus 120 tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Npt 199 (447)
++||+.|+.+++ .++++||+|+++.+.|++....+...+.+ .|+++++++..|++++++++ +++|++|++++|+||+
T Consensus 71 ~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~-~gi~v~~vd~~d~e~l~~ai-~~~t~lV~lesP~Npt 147 (380)
T PRK06176 71 FASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVK-NGLSCTIIDTSDLSQIKKAI-KPNTKALYLETPSNPL 147 (380)
T ss_pred ECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHh-cCeEEEEcCCCCHHHHHHhc-CcCceEEEEECCCCCC
Confidence 999999998766 57799999999999999988777666555 79999999999999999999 7889999999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhh
Q 013210 200 LAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGAL 277 (447)
Q Consensus 200 G~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~ 277 (447)
|.+.|+++|.++|+++|+++|+|++| .+....+..+++|++++|++|+++++++.+||+++. ++++.++++..+.
T Consensus 148 g~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~--- 224 (380)
T PRK06176 148 LKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQN--- 224 (380)
T ss_pred ceecCHHHHHHHHHHcCCEEEEECCccccccCCccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHH---
Confidence 99999999999999999999999999 445556778899999999999999999888898876 4567777776665
Q ss_pred hhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013210 278 MLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 355 (447)
Q Consensus 278 ~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 355 (447)
..|..+++..++...++++++..|++++.+++..+.++|++++. +++||+++++|+|+++++++. |+|++++|+
T Consensus 225 -~~G~~~~~~~~~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~---g~g~~~s~~ 300 (380)
T PRK06176 225 -AIGGVLGPQDSWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMR---GFSGMLSFT 300 (380)
T ss_pred -HhcCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCC---CCceEEEEE
Confidence 56777888889999999999999999999999999999999876 899999999999999999885 789999999
Q ss_pred eCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHH
Q 013210 356 METEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKA 435 (447)
Q Consensus 356 l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~a 435 (447)
+++.+.+.+|+++|+.. . +++|+|+.+|++++|+.++|..++++.++.+|+++++||||+| .||.+++|++|.+|
T Consensus 301 ~~~~~~~~~f~~~l~~~---~-~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dli~dl~~A 375 (380)
T PRK06176 301 LKNDSEAVAFVESLKLF---I-LGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVG-IEHEQDLLEDLEQA 375 (380)
T ss_pred ECCHHHHHHHHHcCCcc---e-EccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEec-cCCHHHHHHHHHHH
Confidence 98777889999999973 3 7999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHh
Q 013210 436 LSRM 439 (447)
Q Consensus 436 l~~~ 439 (447)
|+++
T Consensus 376 l~~~ 379 (380)
T PRK06176 376 FAKI 379 (380)
T ss_pred Hhhc
Confidence 9864
No 29
>PLN02509 cystathionine beta-lyase
Probab=100.00 E-value=6.4e-57 Score=451.06 Aligned_cols=374 Identities=29% Similarity=0.469 Sum_probs=329.9
Q ss_pred CCchhhHhhhcCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeE
Q 013210 38 WEDPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAA 117 (447)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~ 117 (447)
+.++.+.++|.......++++++|||.++||.+++... ...|.|+|.++|..+.+++.+|+++|.+.+
T Consensus 84 ~~~~~t~~~~~~~~~~~~~~~~~Pi~~sst~~~~~~~~------------~~~~~Y~r~gnpt~~aLE~~lA~leg~e~a 151 (464)
T PLN02509 84 EASVSTLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIE------------NGPYDYTRSGNPTRDALESLLAKLDKADRA 151 (464)
T ss_pred CCCcchHheeCCCCCCCCCCccCCccccceecCccccc------------cCCCccCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 45677888886544455789999999999998876310 235889999999999999999999999999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCC
Q 013210 118 YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISN 197 (447)
Q Consensus 118 ~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~N 197 (447)
++++||++|+.+++ .++++||+||++.+.|+++...+...+.+ .|+++.+++..|++++++++ +++|++|++++|+|
T Consensus 152 i~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~-~G~~v~~vd~~d~e~l~~ai-~~~TklV~lesPsN 228 (464)
T PLN02509 152 FCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPR-SGVVVKRVNTTNLDEVAAAI-GPQTKLVWLESPTN 228 (464)
T ss_pred EEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHH-CCeEEEEeCCCCHHHHHHhC-CcCCeEEEEECCCC
Confidence 99999999987655 57899999999999999988777555555 79999999988999999999 88999999999999
Q ss_pred CCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhh
Q 013210 198 PTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQG 275 (447)
Q Consensus 198 ptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~ 275 (447)
|+|.+.|+++|+++|+++|+++|+|++| .++...+..+++|++++|++|+++++|+.+||+++. ++.+.+.++..+.
T Consensus 229 PtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~- 307 (464)
T PLN02509 229 PRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQN- 307 (464)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEECCccccccCChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHH-
Confidence 9999999999999999999999999999 555567778899999999999999999888899876 4455565554444
Q ss_pred hhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013210 276 ALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLC 353 (447)
Q Consensus 276 ~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 353 (447)
..|..+++..|++.+++++++..|++++.++++++.++|++++. +|+||+++++|+|.+++++++ |+|++++
T Consensus 308 ---~~g~~l~p~~A~l~lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~---g~gg~~s 381 (464)
T PLN02509 308 ---SEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAK---GAGSVFS 381 (464)
T ss_pred ---hcCCCcCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCC---CCceEEE
Confidence 45677889999999999999999999999999999999999976 899999999999999999986 7899999
Q ss_pred EEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHH
Q 013210 354 LDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFE 433 (447)
Q Consensus 354 ~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~ 433 (447)
|.+.+.+.+.+|++.|+.. . +++|+|+++|++++|+.++|..+++++++++|+++++||||+| .|+.+++|++|+
T Consensus 382 f~~~~~~~~~~f~~~l~l~---~-~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvG-lE~~~DLi~Dl~ 456 (464)
T PLN02509 382 FITGSVALSKHLVETTKYF---S-IAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAG-IEDVDDLISDLD 456 (464)
T ss_pred EEeCCHHHHHHHHHcCCcc---e-EcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHH
Confidence 9998777788999999963 3 7999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHH
Q 013210 434 KALSR 438 (447)
Q Consensus 434 ~al~~ 438 (447)
+||+.
T Consensus 457 ~Al~~ 461 (464)
T PLN02509 457 IAFRT 461 (464)
T ss_pred HHHcc
Confidence 99974
No 30
>PRK06767 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.6e-56 Score=444.65 Aligned_cols=376 Identities=32% Similarity=0.488 Sum_probs=330.5
Q ss_pred chhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEE
Q 013210 40 DPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (447)
Q Consensus 40 ~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~ 118 (447)
++.+.++|.. .....+|+++|||+.|+||.+++.+++.+++.+. ...|.|+|+++|++++|++.+|+++|.+..+
T Consensus 5 ~~~t~~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~----~~~~~y~r~~~pt~~~Le~~lA~l~G~~~al 80 (386)
T PRK06767 5 HMETALIHHGYTSEEHKGSLTPPLFQTSTFTFETAQQGEASFAGV----DPSYIYSRLGNPTVKLFEERMAVLEGGEEAL 80 (386)
T ss_pred CcccceeeCCCCCCCCCCCccCCccCccceecCCHHHHHHhhccC----cCCccccCCCCcchHHHHHHHHHHhCCCcEE
Confidence 4566677744 3334568999999999999999998888888654 2358899999999999999999999999999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCC
Q 013210 119 CTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNP 198 (447)
Q Consensus 119 ~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Np 198 (447)
+++||++|+.+++.+++++||+|+++.+.|+++...+.....+ .|+++.+++..|++++++++ +++|++|++++|+||
T Consensus 81 ~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~-~gi~~~~~~~~d~~~l~~~i-~~~tklV~lesp~Np 158 (386)
T PRK06767 81 AFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEK-FMITHSFCDMETEADIENKI-RPNTKLIFVETPINP 158 (386)
T ss_pred EECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhh-cCeEEEEeCCCCHHHHHHhh-CcCceEEEEeCCCCC
Confidence 9999999999999999999999999999999988877555554 68889998888999999999 778999999999999
Q ss_pred CccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHH-Hhhhh
Q 013210 199 TLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMD-LHQGA 276 (447)
Q Consensus 199 tG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~-~~~~~ 276 (447)
+|.+.|+++|.++|+++|+++|+|++| .+....+...|+|++++|+||+++++|+++||+++++++.+..+.. .+.
T Consensus 159 tG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~-- 236 (386)
T PRK06767 159 TMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRK-- 236 (386)
T ss_pred CceecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHH--
Confidence 999999999999999999999999999 4445566777999999999999999999988999999888776543 333
Q ss_pred hhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEE
Q 013210 277 LMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCL 354 (447)
Q Consensus 277 ~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~ 354 (447)
..|+.+++..+++.+++++++..|++++++++.+++++|++++. .+.|| +|++++++++ +.|++++|
T Consensus 237 --~~g~~~~~~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p------~~~~~~~~~~---~~gg~vsf 305 (386)
T PRK06767 237 --DIGGIMAPFDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP------EGELASRQMK---RGGGVISF 305 (386)
T ss_pred --HhCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECC------CcHHHHHhCC---CCCceEEE
Confidence 45677788888999999999999999999999999999999865 57776 6789999886 68999999
Q ss_pred EeC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHH
Q 013210 355 DME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFE 433 (447)
Q Consensus 355 ~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~ 433 (447)
+++ +.+.+.+|+++|+.. + +++|+|+++|++++|++++|..++++++..+|+++++||||+| .|+.+++|++|.
T Consensus 306 ~l~~~~~~~~~f~~~l~~~---~-~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG-lE~~~dl~~dl~ 380 (386)
T PRK06767 306 SIKGGKEETQAFINDLHFI---T-IAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVG-LESWEDIVSDLE 380 (386)
T ss_pred EEcCCHHHHHHHHHhCCcc---E-EecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHH
Confidence 997 456788999999974 4 7999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHh
Q 013210 434 KALSRM 439 (447)
Q Consensus 434 ~al~~~ 439 (447)
+||+++
T Consensus 381 ~al~~~ 386 (386)
T PRK06767 381 QALKKI 386 (386)
T ss_pred HHHhhC
Confidence 999854
No 31
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=100.00 E-value=1.4e-56 Score=443.19 Aligned_cols=372 Identities=33% Similarity=0.469 Sum_probs=327.9
Q ss_pred hhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEE
Q 013210 41 PAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (447)
Q Consensus 41 ~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~ 119 (447)
+.+.++|.. .....+++++|||+.++||.+++.. +...|.|+|+.+|....+++.+|+++|.+.+++
T Consensus 4 ~~t~~~~~~~~~~~~~~~~~~pi~~ss~~~~~~~~------------~~~~~~Y~R~~~p~~~~le~~lA~l~g~~~v~~ 71 (382)
T TIGR02080 4 QATIAVRSGLNSDTQYGCVVPPIYLSTTYNFTGFN------------EPRAYDYSRSGNPTRDLLQQALAELEGGAGAVV 71 (382)
T ss_pred cccceeecCCCCCCCCCCccCCeeCCceeEeCCcC------------ccCCCcccCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 345566643 2233469999999999999886531 012478999999999999999999999999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCC
Q 013210 120 TASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPT 199 (447)
Q Consensus 120 tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Npt 199 (447)
|+||++|+.+++.+++++||+|+++.+.|++++..+..+... .++++.+++.+|++++++++ +++|++|++++|+|||
T Consensus 72 ~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~-~~~~v~~~d~~d~~~l~~ai-~~~tklV~l~~p~NPt 149 (382)
T TIGR02080 72 TNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKK-GCFRVLFVDQGDEQALRAAL-AQKPKLVLIETPSNPL 149 (382)
T ss_pred EcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhh-cCeEEEEECCCCHHHHHHhc-CcCceEEEEECCCCCC
Confidence 999999999999999999999999999999888777555444 57888888888999999999 7789999999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhh
Q 013210 200 LAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGAL 277 (447)
Q Consensus 200 G~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~ 277 (447)
|.+.|+++|.++|+++|+++++|++| .+....+..+++|++++|+||+++++++.++|+++. ++++++++...+.
T Consensus 150 G~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~--- 226 (382)
T TIGR02080 150 LRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWAN--- 226 (382)
T ss_pred CEecCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHH---
Confidence 99999999999999999999999999 455556777799999999999999877666788765 6788888877666
Q ss_pred hhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013210 278 MLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 355 (447)
Q Consensus 278 ~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 355 (447)
..|..+++..+++++++++++..|++++.+++..+.++|++++. +|+||+++++|+|+++++++. |+|++++|+
T Consensus 227 -~~g~~~sp~~a~l~lr~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~---g~g~~~s~~ 302 (382)
T TIGR02080 227 -NLGVTGGAFDSYLTLRGLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQK---GFGAMLSFE 302 (382)
T ss_pred -ccCCCCCHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCC---CCCceEEEE
Confidence 67888999999999999999999999999999999999999987 899999999999999999875 789999999
Q ss_pred eC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 013210 356 ME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEK 434 (447)
Q Consensus 356 l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~ 434 (447)
++ +.+.+.+|++.|+.. . +++|+|+.+|++++|++++|..+++++++.+|+++++||||+| .|+.+++|++|.+
T Consensus 303 ~~~~~~~~~~f~~~l~~~---~-~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvG-lE~~~dl~~dl~~ 377 (382)
T TIGR02080 303 LKGGEQTVRRFLGGLSLF---T-LAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVG-LEDADDLIADLEQ 377 (382)
T ss_pred ecCcHHHHHHHHHcCCcc---e-EeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEec-cCCHHHHHHHHHH
Confidence 97 456678999999973 3 7999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHH
Q 013210 435 ALSR 438 (447)
Q Consensus 435 al~~ 438 (447)
||++
T Consensus 378 al~~ 381 (382)
T TIGR02080 378 GLRA 381 (382)
T ss_pred HHhh
Confidence 9974
No 32
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=100.00 E-value=4e-56 Score=440.12 Aligned_cols=364 Identities=43% Similarity=0.671 Sum_probs=330.2
Q ss_pred CccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhc
Q 013210 56 GGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLC 135 (447)
Q Consensus 56 ~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~ 135 (447)
|++++||+.++||.+++.+++.+.+... ...+.|+|+.+|+.+++|+++|+++|.+.+++++||++|+..++.+++
T Consensus 1 ~~~~~pi~~~~t~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~ 76 (369)
T cd00614 1 GAVAPPIYQTSTFVFPSPAEAADLFALR----EGGYIYSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALL 76 (369)
T ss_pred CCcCCCccCCCceecCCHHHHHHhhcCC----cCCceeECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHc
Confidence 4789999999999999998887776543 346899999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhc
Q 013210 136 SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK 215 (447)
Q Consensus 136 ~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~ 215 (447)
++||+|+++.+.|+++...+...... .|+++.+++.+|++++++++ ++++++|++++|+||+|.+.|+++|+++|+++
T Consensus 77 ~~gd~Vl~~~~~y~~~~~~~~~~~~~-~g~~~~~v~~~d~~~l~~~i-~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~ 154 (369)
T cd00614 77 KAGDHVVASDDLYGGTYRLFERLLPK-LGIEVTFVDPDDPEALEAAI-KPETKLVYVESPTNPTLKVVDIEAIAELAHEH 154 (369)
T ss_pred CCCCEEEECCCCcchHHHHHHHHHhh-cCeEEEEeCCCCHHHHHHhc-CCCCeEEEEECCCCCCCeecCHHHHHHHHHHc
Confidence 99999999999999998877655555 79999999999999999999 77899999999999999999999999999999
Q ss_pred CCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcCh-HHHHHHHHHhhhhhhhcCCCccHHHHHHHH
Q 013210 216 GVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPA-NLVNSMMDLHQGALMLLGPTMNPKVAFELS 293 (447)
Q Consensus 216 gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~-~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~ 293 (447)
|+++|+|++| .+....+..+++|++++|+||+++++|+.+||++++++ ++++.++..+. ..|..+++..+++++
T Consensus 155 g~~livD~t~~~~~~~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~----~~g~~~~p~~a~~~l 230 (369)
T cd00614 155 GALLVVDNTFATPYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRL----ALGTILSPFDAWLLL 230 (369)
T ss_pred CCEEEEECCCcchhcCChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHH----hhCCCCCHHHHHHHH
Confidence 9999999999 44455777889999999999999999877789999876 88888877665 467788899999999
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhh
Q 013210 294 ERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQ 370 (447)
Q Consensus 294 ~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~l~~~l~ 370 (447)
+.++++..|++++.+++.++.++|++++. +|.||+++++|+|++++++++ |.|++++|.++ +.+.+.+|++.|+
T Consensus 231 ~~l~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~---g~g~i~s~~l~~~~~~~~~f~~~l~ 307 (369)
T cd00614 231 RGLKTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMS---GYGGVFSFELKGGLEAAKKFLNALK 307 (369)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcC---CCceEEEEEeCCCHHHHHHHHHcCC
Confidence 99999999999999999999999999874 899999999999999999886 78999999997 6777899999999
Q ss_pred cccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013210 371 NYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 437 (447)
Q Consensus 371 ~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 437 (447)
... +++|+|+++|++++|+..+|..++.+.+...|+++++||||+| .|+.+++|++|.+||+
T Consensus 308 ~~~----~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svG-lE~~~dl~~dl~~al~ 369 (369)
T cd00614 308 LFS----LAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVG-IEDVEDLIADLEQALK 369 (369)
T ss_pred cce----EcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeC-cCCHHHHHHHHHHhhC
Confidence 733 6999999999999999999999999999999999999999999 9999999999999973
No 33
>PRK07671 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=3.3e-56 Score=440.14 Aligned_cols=371 Identities=36% Similarity=0.578 Sum_probs=328.8
Q ss_pred chhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEE
Q 013210 40 DPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (447)
Q Consensus 40 ~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~ 118 (447)
++.+.++|+. .....+|+++||||.++||.+++.. . ...|.|+|..+|....+++.+|+++|++..+
T Consensus 2 ~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~--------~----~~~~~y~r~~~p~~~~Le~~lA~l~g~~~~~ 69 (377)
T PRK07671 2 RAKTKLIHGGIIGDPSTGAVSVPIYQVSTYKQEAVG--------K----HQGYEYSRTGNPTRAALEELIAVLEGGHAGF 69 (377)
T ss_pred CcccceeeCCCCCCCCCCCccCCccCCcceecCCCC--------C----cCCCCcCCCCChHHHHHHHHHHHHhCCCceE
Confidence 3556677744 3344579999999999999887731 1 2358899999999999999999999999999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCC
Q 013210 119 CTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNP 198 (447)
Q Consensus 119 ~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Np 198 (447)
++++|+.|+..++ .++++||+|+++.+.|++.+..+...+.+ .|+++++++..|++++++++ +++|++|++++|+||
T Consensus 70 ~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~-~G~~v~~v~~~d~~~l~~ai-~~~tklV~le~P~NP 146 (377)
T PRK07671 70 AFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNR-FGIEHTFVDTSNLEEVEEAI-RPNTKAIYVETPTNP 146 (377)
T ss_pred EeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhc-CCeEEEEECCCCHHHHHHhc-CCCCeEEEEECCCCC
Confidence 9999999988765 57889999999999999887766555555 79999999988999999999 789999999999999
Q ss_pred CccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhh
Q 013210 199 TLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGA 276 (447)
Q Consensus 199 tG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~ 276 (447)
+|.+.|+++|.++|+++|+++|+|++| .+....+..+++|++++|++|+++++++.+||+++. +++++++++..+.
T Consensus 147 tg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~-- 224 (377)
T PRK07671 147 LLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQN-- 224 (377)
T ss_pred CCcccCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHH--
Confidence 999999999999999999999999999 445556777899999999999999998777787765 5678888887776
Q ss_pred hhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEE
Q 013210 277 LMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCL 354 (447)
Q Consensus 277 ~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~ 354 (447)
..|..+++..++.++++++++..|++++++++..+.++|++++. .|+||+++++|+|+++++++. |+|++++|
T Consensus 225 --~~g~~~~~~~a~l~~~~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~---g~g~~~s~ 299 (377)
T PRK07671 225 --STGGILGPQDSWLLLRGLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQAN---GFGGMISF 299 (377)
T ss_pred --hhcCCCCHHHHHHHHcCcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCC---CCCceEEE
Confidence 56888999999999999999999999999999999999999876 899999999999999999885 78999999
Q ss_pred EeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 013210 355 DMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEK 434 (447)
Q Consensus 355 ~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~ 434 (447)
++.+.+.+.+|+++|+... +++|+|+.+|++++|+.++|..++.+.+..+|+++++||||+| .||.+++|++|.+
T Consensus 300 ~~~~~~~~~~f~~~l~l~~----~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~dl~~ 374 (377)
T PRK07671 300 DVGSEETANKVLERLQYFT----LAESLGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVG-IEDGEDLIEDLAQ 374 (377)
T ss_pred EeCCHHHHHHHHHhCCcce----EccCCCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHHH
Confidence 9987777899999999733 7999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHH
Q 013210 435 ALS 437 (447)
Q Consensus 435 al~ 437 (447)
||+
T Consensus 375 al~ 377 (377)
T PRK07671 375 ALA 377 (377)
T ss_pred HhC
Confidence 984
No 34
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=100.00 E-value=4e-56 Score=445.69 Aligned_cols=384 Identities=33% Similarity=0.515 Sum_probs=328.4
Q ss_pred hhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEE
Q 013210 41 PAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (447)
Q Consensus 41 ~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~ 119 (447)
+.+.++|+. .....+|++.|||+.++||.+++.+++.+.+... ...+.|+|..+|+.++++++||+++|.+.+++
T Consensus 2 ~~t~~~~~~~~~~~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~----~~~~~ysr~~~p~~~~le~~lA~l~g~~~~v~ 77 (418)
T TIGR01326 2 FETLQLHAGQEPDPTTGSRAVPIYQTTSYVFDSTEHAAALFGLQ----EAGNIYSRLMNPTTDVLEQRIAALEGGVAALA 77 (418)
T ss_pred ccceeEECCCCCCCCCCCccCCccCCCCeecCCHHHHHHhhccC----cCCceeECCCChhHHHHHHHHHHHhCCCeEEE
Confidence 345566654 3344468999999999999999987666554322 23478999999999999999999999999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCC
Q 013210 120 TASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPT 199 (447)
Q Consensus 120 tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Npt 199 (447)
|+||++|+..++.+++++||+|+++.+.|+++...+...+.. .|+++++++.+|++++++++ ++++++|++++|+||+
T Consensus 78 ~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~-~G~~v~~v~~~d~~~l~~~l-~~~t~~V~le~p~NPt 155 (418)
T TIGR01326 78 VASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKR-LGIEVRFVDPDDPEEFEKAI-DENTKAVFAETIGNPA 155 (418)
T ss_pred EccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHH-cCcEEEEECCCCHHHHHHhc-CcCCeEEEEECCCCCC
Confidence 999999999999999999999999999999887776555555 79999999988999999999 7789999999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHH-----------
Q 013210 200 LAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVN----------- 267 (447)
Q Consensus 200 G~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~----------- 267 (447)
|.+.|+++|.++|+++|+++|+|++| .+....+...++|+++.|+||+++++|+++||+++.++.+..
T Consensus 156 g~v~dl~~I~~la~~~~i~livD~t~~~~~~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~ 235 (418)
T TIGR01326 156 INVPDIEAIAEVAHAHGVPLIVDNTFATPYLCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTP 235 (418)
T ss_pred CeecCHHHHHHHHHHcCCEEEEECCCchhhcCCchhcCCeEEEECccccccCCccceEEEEEecccccccccccccccCC
Confidence 99999999999999999999999999 455556777799999999999999999999776664432110
Q ss_pred -----------------HHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCC
Q 013210 268 -----------------SMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPG 328 (447)
Q Consensus 268 -----------------~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~ 328 (447)
.+.+.+.......|..+++..++.++++++++..|++++.+++..++++|.+++. .|+||+
T Consensus 236 ~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~ 315 (418)
T TIGR01326 236 DPSYHGLVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPG 315 (418)
T ss_pred CCccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCC
Confidence 0001111122255778889999999999999999999999999999999999875 899999
Q ss_pred CCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHh
Q 013210 329 LEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKAL 407 (447)
Q Consensus 329 ~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~ 407 (447)
++++|+|+++++++.. |+|++++|+++ +.+.+.+|++.|+... +++|+|+++|++++|+.++|..++.+.+..
T Consensus 316 l~~~~~~~~~~~~~~~--g~g~~~s~~l~~~~~~~~~f~~~l~l~~----~~~slG~~~sl~~~~~~~~h~~~~~~~~~~ 389 (418)
T TIGR01326 316 LASHPHHALAKKYLPK--GFGAVLSFEIKGGREAGKKFIDALKLAS----HLANVGDAKSLVIHPASTTHQQLSEEEQLK 389 (418)
T ss_pred CCCCccHHHHHHhccC--CCcceEEEEecCCHHHHHHHHHhCCcce----eccccCCCCceeeCCCCCCcccCCHHHHHh
Confidence 9999999999999843 68999999996 5566789999999743 689999999999999999999999999999
Q ss_pred cCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013210 408 AGISAGLVRMSVGYLGTLDQRWSQFEKALS 437 (447)
Q Consensus 408 ~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 437 (447)
+|+++++||||+| .|+.+++|++|.+||+
T Consensus 390 ~gi~~~liR~svG-lE~~~dl~~dl~~Al~ 418 (418)
T TIGR01326 390 AGVTPGLIRLSVG-IENIDDIIADLEQALE 418 (418)
T ss_pred cCCCCCeEEEEec-CCCHHHHHHHHHHhhC
Confidence 9999999999999 9999999999999984
No 35
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.2e-55 Score=442.38 Aligned_cols=385 Identities=31% Similarity=0.458 Sum_probs=333.4
Q ss_pred hhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEE
Q 013210 41 PAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (447)
Q Consensus 41 ~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~ 119 (447)
+.+.++|.. .....+|++++||+.++||.+++.+++.+.+... ...+.|+|..+|+...++++||+++|.+.+++
T Consensus 8 ~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~le~~lA~l~g~~~al~ 83 (427)
T PRK05994 8 FATLAVHAGAQPDPTTGARATPIYQTTSFVFNDADHAASLFGLQ----AFGNIYTRITNPTNAVLEERVAALEGGTAALA 83 (427)
T ss_pred cchhheECCcCCCCCCCCccCCCcCCCCcccCCHHHHHHhhccc----cCCcceECCCCccHHHHHHHHHHHhCCCcEEE
Confidence 556666643 3344468999999999999999987776655432 22478999999999999999999999999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCC
Q 013210 120 TASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPT 199 (447)
Q Consensus 120 tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Npt 199 (447)
++||++|+.+++.+++++||+||++.+.|+++...+...+.+ .|+++++++.+|++++++++ +++|++|++++|+||+
T Consensus 84 ~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~-~G~~v~~vd~~d~~~l~~ai-~~~tklV~vesp~Npt 161 (427)
T PRK05994 84 VASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKS-FGWQVRWADADDPASFERAI-TPRTKAIFIESIANPG 161 (427)
T ss_pred EcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHh-cCcEEEEECCCCHHHHHHhc-CcCCeEEEEECCCCCC
Confidence 999999999999999999999999999999987776555555 79999999999999999999 7889999999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChH--------------
Q 013210 200 LAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAN-------------- 264 (447)
Q Consensus 200 G~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~-------------- 264 (447)
|.+.|+++|.++|+++|+++|+|++| .++...+..+|+|+++.|+||++|++|+.+||+++....
T Consensus 162 G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~ 241 (427)
T PRK05994 162 GTVTDIAAIAEVAHRAGLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSE 241 (427)
T ss_pred CeecCHHHHHHHHHHcCCEEEEECCccccccCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccC
Confidence 99999999999999999999999999 667778888999999999999999999999888874211
Q ss_pred ---------HHHHHH---H---HhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCC
Q 013210 265 ---------LVNSMM---D---LHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYP 327 (447)
Q Consensus 265 ---------~~~~l~---~---~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p 327 (447)
+.+.+. . .+.......|..+++..|++++++++++..|++++++++..+.++|++++. +|.||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP 321 (427)
T PRK05994 242 PRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYA 321 (427)
T ss_pred CcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 111111 0 000012256888999999999999999999999999999999999999986 89999
Q ss_pred CCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHH
Q 013210 328 GLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKA 406 (447)
Q Consensus 328 ~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~ 406 (447)
+++++|+|+++++++.. |+|++++|+++ +.+.+.+|++.|+.. . +++|+|+++|++++|+.++|..++.+.+.
T Consensus 322 ~l~~~~~~~~~~~~~~~--g~g~~~sf~l~~~~~~~~~~~~~l~l~---~-~~~s~G~~~sl~~~p~~~~h~~~~~~~~~ 395 (427)
T PRK05994 322 GLPDDPYHALAQKYSPK--GAGAVFTFGLKGGYEAGVKLVSSLKLF---S-HLANIGDTRSLVIHPASTTHRQLTDEQKV 395 (427)
T ss_pred CCCCCccHHHHHHhcCC--CceEEEEEEecCCHHHHHHHHHhCCcc---e-eccccCCCcceeeCCCCCCcccCCHHHHH
Confidence 99999999999998643 68999999997 556788999999973 3 79999999999999999999999999999
Q ss_pred hcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 407 LAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 407 ~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
..|+++++||||+| .|+.+++|++|.+||++
T Consensus 396 ~~gi~~~liRlsvG-lE~~~dli~dl~~Al~~ 426 (427)
T PRK05994 396 AAGAGPDVVRLSIG-IEDVDDIIADLEQALAK 426 (427)
T ss_pred hcCCCCCcEEEEec-cCCHHHHHHHHHHHHhh
Confidence 99999999999999 99999999999999975
No 36
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=7.3e-56 Score=440.53 Aligned_cols=374 Identities=32% Similarity=0.471 Sum_probs=329.4
Q ss_pred hhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEE
Q 013210 41 PAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (447)
Q Consensus 41 ~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~ 119 (447)
+.+.++|+. .....+|++.|||+.++||.+++.. . ...|.|+|+.+|..+.++++||+++|++..++
T Consensus 13 ~~t~~~~~~~~~~~~~~~~~~pi~~ss~~~~~~~~-----------~-~~~~~y~R~~~p~~~~Le~~lA~l~g~~~~v~ 80 (405)
T PRK08776 13 AATAAVRAGIDRDTAYGAVTPPIVLSSNFSFDGFG-----------N-KRQYDYTRSGNPTRDLLGEALAELEGGAGGVI 80 (405)
T ss_pred ccchheeCCCCCCCCCCCccCCEeccceEEeCCCC-----------c-ccCCcccCCCChHHHHHHHHHHHHhCCCceEE
Confidence 456667744 3344579999999999999887631 0 12578999999999999999999999988999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCC
Q 013210 120 TASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPT 199 (447)
Q Consensus 120 tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Npt 199 (447)
++||++|+.+++.+++++||+|+++.+.|+++...+...... .|+++..++..|+++|++++ +++|++|++++|+||+
T Consensus 81 ~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~-~g~~v~~v~~~d~~~l~~~i-~~~tklV~l~~P~NPt 158 (405)
T PRK08776 81 TATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKK-GHFALITADLTDPRSLADAL-AQSPKLVLIETPSNPL 158 (405)
T ss_pred EcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHh-cCcEEEEECCCCHHHHHHhc-CcCCeEEEEECCCCCC
Confidence 999999999999999999999999999999877766555444 68899999888999999999 7789999999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhh
Q 013210 200 LAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGAL 277 (447)
Q Consensus 200 G~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~ 277 (447)
|.+.|+++|.++|+++|+++|+|++| .+....+..+|+|++++|+||+++++|+.+||+++. ++++.+++...+.
T Consensus 159 G~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~--- 235 (405)
T PRK08776 159 LRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWAN--- 235 (405)
T ss_pred CccCCHHHHHHHHHHcCCEEEEECCCcccccCCcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHH---
Confidence 99999999999999999999999999 455567777899999999999999998777788866 5777777765554
Q ss_pred hhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013210 278 MLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 355 (447)
Q Consensus 278 ~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 355 (447)
..|..+++..+++..++++++..|++++.+++..+.++|++++. +|.||+++++|+|++++++++ |+|++++|+
T Consensus 236 -~~g~~~s~~~a~l~~~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~---g~g~~~s~~ 311 (405)
T PRK08776 236 -ALGLTGSPFDAFLTLRGLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQK---GFGAMLSFE 311 (405)
T ss_pred -hcCCCCCHHHHHHHHhhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCC---CCceEEEEE
Confidence 45666788999999999999999999999999999999999986 899999999999999999885 789999999
Q ss_pred eC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 013210 356 ME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEK 434 (447)
Q Consensus 356 l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~ 434 (447)
++ +.+.+.+|++.|+... +++|+|+.+|++++|+.++|..++.++++.+|+++++||||+| .|+.+++|++|.+
T Consensus 312 ~~~~~~~~~~f~~~l~l~~----~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svG-lE~~~dli~dl~~ 386 (405)
T PRK08776 312 LEGGEAAVRAFVDGLRYFT----LAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVG-IESAEDLLIDLRA 386 (405)
T ss_pred EcCCHHHHHHHHHhCCcce----EccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeC-cCCHHHHHHHHHH
Confidence 97 4566789999999733 7999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHhh
Q 013210 435 ALSRMQ 440 (447)
Q Consensus 435 al~~~~ 440 (447)
||+++.
T Consensus 387 al~~~~ 392 (405)
T PRK08776 387 GLARAE 392 (405)
T ss_pred HHHHhH
Confidence 999874
No 37
>PRK06460 hypothetical protein; Provisional
Probab=100.00 E-value=8.3e-56 Score=437.46 Aligned_cols=370 Identities=30% Similarity=0.518 Sum_probs=322.1
Q ss_pred chhhHhhhcCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEE
Q 013210 40 DPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (447)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~ 119 (447)
.+.+.++|... ...+|++.+||+.++||.+++. ..|.|+|..+|..+++++++|+++|++..++
T Consensus 2 ~~~t~~~~~~~-~~~~~~~~~pi~~~~~~~~~~~---------------~~~~y~r~~~p~~~~L~~~lA~l~g~~~~v~ 65 (376)
T PRK06460 2 KDATRTVREDI-DEATGAITTPIYQTTAYHYPEG---------------EKYRYSREANPTVLELTKKIVELENAEMGVA 65 (376)
T ss_pred CcceeeeecCC-CCCCCCccCCccCCcceeeCCC---------------CCcceeCCCCccHHHHHHHHHHHhCCCcEEE
Confidence 35566666432 2456899999999999998762 2588999999999999999999999988888
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCC
Q 013210 120 TASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPT 199 (447)
Q Consensus 120 tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Npt 199 (447)
++||++|+..++.+++++||+|+++.+.|++++..+...+.. .|+++..++.++.+.+++.+ ++++++|++++|+||+
T Consensus 66 ~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~-~G~~v~~~~~~~~~~l~~~~-~~~tklV~l~sp~NPt 143 (376)
T PRK06460 66 FSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKN-WGVNVDASNPGSDNIIEKAK-SKRYDVVFVENITNPL 143 (376)
T ss_pred eCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHh-hCcEEEEECCCCHHHHHHhc-CCCceEEEEECCCCCC
Confidence 899999999999999999999999998887766665444444 78999998887766676655 6789999999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhh
Q 013210 200 LAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALM 278 (447)
Q Consensus 200 G~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~ 278 (447)
|.+.|+++|.++|+++|+++|+|++| .++...+...++|+++.|+||+++++++.++|++++++++++.++..+.
T Consensus 144 G~v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~---- 219 (376)
T PRK06460 144 LRVVDITELSKVCKENGSILIVDATFSTPINQKPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRR---- 219 (376)
T ss_pred CcccCHHHHHHHHHHcCCEEEEECCcCccccCChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHH----
Confidence 99999999999999999999999999 4444455566899999999999998765456999999999988887666
Q ss_pred hcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEe
Q 013210 279 LLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDM 356 (447)
Q Consensus 279 ~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l 356 (447)
..+..+++..++.++++++++..+++++.++++++.++|++++. +|+||+++++|+|++++++++ |+|++++|++
T Consensus 220 ~~g~~~~~~~a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~---g~gg~~s~~~ 296 (376)
T PRK06460 220 TLGTSLDPHAAYLTLRGIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLK---GFGGVLSFEV 296 (376)
T ss_pred hcCCCCCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCC---CCceEEEEEE
Confidence 45666777888888889999999999999999999999999875 899999999999999999986 7899999999
Q ss_pred C-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHH
Q 013210 357 E-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKA 435 (447)
Q Consensus 357 ~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~a 435 (447)
+ +.+.+.+|++.|+... +++|+|+++|++++|+.++|..++.+.+.++|+++++||||+| .||.+++|++|++|
T Consensus 297 ~~~~~~~~~~~~~l~~~~----~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~dl~~a 371 (376)
T PRK06460 297 NGGQESALKVMKSLKLII----PAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVG-IEDVNDLIEDLDRA 371 (376)
T ss_pred cCcHHHHHHHHHhCCcce----eccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHHHH
Confidence 7 4567889999998733 7999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHh
Q 013210 436 LSRM 439 (447)
Q Consensus 436 l~~~ 439 (447)
|+++
T Consensus 372 l~~~ 375 (376)
T PRK06460 372 LSTL 375 (376)
T ss_pred HHhh
Confidence 9864
No 38
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=1.3e-55 Score=434.83 Aligned_cols=365 Identities=25% Similarity=0.437 Sum_probs=317.4
Q ss_pred cCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHH
Q 013210 48 ARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAI 127 (447)
Q Consensus 48 ~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~ 127 (447)
|+.....+|+++||||+++||.+++.+++. + ....|.|+|.++|+...||++||+++|++.+++|+||++|+
T Consensus 7 ~~~~~~~~~~~~~pi~~~st~~~~~~~~~~--~------~~~~~~Y~r~gnPt~~~lE~~lA~l~g~~~~~~~~sG~~Ai 78 (377)
T TIGR01324 7 GRQPRFSQGSVNPPLQRASTVLFDSHAAQR--R------AKGELTYGRRGTLTHFALQDAMCELEGGAGCYLYPSGLAAV 78 (377)
T ss_pred CCCCCCCCCCccCCeeCCCceeeCChhhhc--C------CcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEECcHHHHH
Confidence 433334568999999999999999864331 1 13468999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccCHHH
Q 013210 128 SSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPE 207 (447)
Q Consensus 128 ~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~ 207 (447)
..++.+++++||+|+++++.|+++...+.....+ .|+++.+++..+.+++++++ +++|++|++++|+||+|.+.|+++
T Consensus 79 ~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~-~gi~v~~~d~~~~e~l~~~i-~~~tklV~lesp~Np~g~~~dl~~ 156 (377)
T TIGR01324 79 TNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKR-MGVDITYYDPLIGEDIATLI-QPNTKVLFLEAPSSITFEIQDIPA 156 (377)
T ss_pred HHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHh-cCcEEEEECCCCHHHHHHhc-CCCceEEEEECCCCCCCcHHHHHH
Confidence 9999999999999999999999887766444444 78999998876668899999 789999999999999999999999
Q ss_pred HHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccH
Q 013210 208 LSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNP 286 (447)
Q Consensus 208 I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~ 286 (447)
|+++|+++|+++++|++| .+..+.+.++|+|++++|++|+++++++.+||+++.+++.++.++.... ..|..+++
T Consensus 157 I~~la~~~g~~livD~t~a~g~~~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~----~~G~~l~p 232 (377)
T TIGR01324 157 IAKAARNPGIVIMIDNTWAAGLLFKPLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSY----LMGQMVDA 232 (377)
T ss_pred HHHHHHHcCCEEEEECCCccccccCccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHH----HhCCCCCH
Confidence 999999999999999999 6677788999999999999999999998888999998888777765443 67999999
Q ss_pred HHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC--CHHHH
Q 013210 287 KVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME--TEEKA 362 (447)
Q Consensus 287 ~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~--~~~~~ 362 (447)
..++..+++++++..|++++++++..++++|++++. +|+||+++++|+|++++++++ |+|++++|.++ +.+.+
T Consensus 233 ~~a~~~~rgl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~---~~g~~~s~~l~~~~~~~~ 309 (377)
T TIGR01324 233 DDAYTTLRGLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFS---GSSGLFSFVLQRLTQKQV 309 (377)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhcc---CCCceEEEEECCCCHHHH
Confidence 999999999999999999999999999999999976 899999999999999999886 78999999997 45678
Q ss_pred HHHHHHhhcccccccccccccCccccccccc-cccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 363 NRLMNYLQNYAQFGFMAVSLGYYETLMSCSG-SSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 363 ~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a-~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
.+|++.|+. |+ +++|+|+.+|+++++. .++|. .+...|+.+++||||+| .|+.+++|++|.+||+++
T Consensus 310 ~~~~~~l~~---~~-~~~slG~~~sl~~~~~~~~~~~-----~~~~~~~~~~liR~svG-lE~~~dl~~dl~~al~~~ 377 (377)
T TIGR01324 310 HAFLDHLQL---FG-LGYSWGGYESLALCNQPELGHR-----PNIKRNLEGPLIRVHIG-LENVDDLKADLKAGFEAI 377 (377)
T ss_pred HHHHHhCCc---ce-EeccCCCccceeecCCCCCCHH-----HHHhccCCCCEEEEEeC-CCCHHHHHHHHHHHHhcC
Confidence 899999997 34 7999999999987433 33332 23456788899999999 999999999999999864
No 39
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=1.9e-55 Score=435.17 Aligned_cols=369 Identities=30% Similarity=0.465 Sum_probs=325.3
Q ss_pred HhhhcCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCCh
Q 013210 44 ALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASG 123 (447)
Q Consensus 44 ~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsgg 123 (447)
.++|.......+++++|||+.++||.+++.+. ...|.|+|.++|.++.+++.+|+++|++.+++++||
T Consensus 4 ~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~------------~~~~~Y~r~~~p~~~~le~~la~l~g~~~~l~~~sG 71 (378)
T TIGR01329 4 LLVNTDNKNDPYDASSMPIYQTATFKQPLAIE------------NGPYDYTRSGNPTRTALESLLAKLDKADRAFAFSSG 71 (378)
T ss_pred eeEeCCCCCCCCCCcCCCeecCcceecCCccc------------cCCCccCCCCChHHHHHHHHHHHHhCCCcEEEECCH
Confidence 34453322234689999999999998876321 235889999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCcccc
Q 013210 124 MSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVA 203 (447)
Q Consensus 124 t~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~ 203 (447)
+.|+++++. ++++||+|+++.+.|+++...+.....+ .|+++++++..|++++++++ +++|++|++++|+||+|.+.
T Consensus 72 ~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~-~G~~v~~vd~~d~~~le~~i-~~~tklv~le~psnptg~v~ 148 (378)
T TIGR01329 72 MAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPR-SGVVVVHVDTTDLDKVKAAL-GPKTKLVLLESPTNPLQKIV 148 (378)
T ss_pred HHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHH-cCcEEEEeCCCCHHHHHHhc-CcCceEEEEECCCCCCCeee
Confidence 999998775 7899999999999999988777555555 79999999999999999999 78999999999999999999
Q ss_pred CHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhhhhcC
Q 013210 204 NIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGALMLLG 281 (447)
Q Consensus 204 ~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~~~g 281 (447)
|+++|+++|+++|+++|+|++| .+....+..+|+|++++|+||+++++++.+||+++. ++++.++++..+. ..|
T Consensus 149 dl~~I~~la~~~g~~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~----~~G 224 (378)
T TIGR01329 149 DIRKISEMAHAQNALVVVDNTMMSPLLCNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQN----STG 224 (378)
T ss_pred cHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHH----hcC
Confidence 9999999999999999999999 666667778899999999999999887766799876 5566677776655 467
Q ss_pred CCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH
Q 013210 282 PTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE 359 (447)
Q Consensus 282 ~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~ 359 (447)
..+++..++++.+.++++..|+++..+++..++++|++++. ++.||+++++|+|++++++++ |+|++++|.+.+.
T Consensus 225 ~~~~~~~a~l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~---g~~~~~sf~~~~~ 301 (378)
T TIGR01329 225 SGLAPFDCWLLLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAK---GAGSVLSFETGSV 301 (378)
T ss_pred CcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCC---CcceEEEEEECCH
Confidence 78888899999999999999999999999999999999876 899999999999999999874 6899999999776
Q ss_pred HHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 360 EKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 360 ~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+.+.+|++.|+. |+ +++|+|+++|++++|++++|..++++.++.+|+++++||||+| .|+.+++|++|++||+++
T Consensus 302 ~~~~~~~~~L~~---~~-i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 302 ALSKRLVEATKL---FS-ITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVG-IEDVDDLISDLDIAFVTA 376 (378)
T ss_pred HHHHHHHHhCcC---cc-cccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHHHHHHhc
Confidence 668899999986 44 7999999999999999999999999999999999999999999 999999999999999865
No 40
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=3e-55 Score=435.29 Aligned_cols=373 Identities=35% Similarity=0.501 Sum_probs=325.7
Q ss_pred CCchhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCe
Q 013210 38 WEDPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEA 116 (447)
Q Consensus 38 ~~~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~ 116 (447)
++++.+.++|.. .....+|++++||+.++||.+++.+.. .+.|.|+|+.++...++|++||+++|.+.
T Consensus 10 ~~~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~-----------~~~~~Y~r~~~p~~~~Le~~lA~~~g~~~ 78 (388)
T PRK07811 10 NQGFATRAIHAGYEPDPATGAVNPPIYASSTFAQDGVGGL-----------RGGYEYARTGNPTRTALEEQLAALEGGAY 78 (388)
T ss_pred CCCcccceeeCCCCCCCCCCCccCCccCCcceecCCcccc-----------cCCCcccCCCCccHHHHHHHHHHHhCCCc
Confidence 345667777744 344557999999999999988774321 23578999999999999999999999999
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCC
Q 013210 117 AYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESIS 196 (447)
Q Consensus 117 ~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~ 196 (447)
.++++||++|+.+++.+++++||+|+++.+.|++++..+.....+ .|+++.+++..|+++|++++ +++|++|++++|+
T Consensus 79 ~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~-~gi~~~~~d~~d~e~l~~~i-~~~tklV~ie~p~ 156 (388)
T PRK07811 79 GRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTR-WGVEYTPVDLSDLDAVRAAI-TPRTKLIWVETPT 156 (388)
T ss_pred eEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcC-CCeEEEEeCCCCHHHHHHhc-CcCCeEEEEECCC
Confidence 888999999999999999999999999999999888777555555 79999999988999999999 7799999999999
Q ss_pred CCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhh
Q 013210 197 NPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQ 274 (447)
Q Consensus 197 NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~ 274 (447)
||+|.+.|+++|.++|+++|+++|+|++| .+....+..+++|++++|++|+++++|.++||+++. ++++.+.+...+.
T Consensus 157 NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~ 236 (388)
T PRK07811 157 NPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQN 236 (388)
T ss_pred CCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHH
Confidence 99999999999999999999999999999 444456777899999999999999988877798876 5677777765554
Q ss_pred hhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013210 275 GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLL 352 (447)
Q Consensus 275 ~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 352 (447)
..|...++..+++.++.++++..|+++..+++..+.++|++++. +|+||+++++|+|+++++++. |+|+++
T Consensus 237 ----~~g~~~s~~~a~l~~~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~---g~g~~~ 309 (388)
T PRK07811 237 ----GAGAVPGPFDAYLTLRGLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMR---GFGGMV 309 (388)
T ss_pred ----hcCCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcC---CCCceE
Confidence 45777788888999999999999999999999999999999976 899999999999999999985 789999
Q ss_pred EEEeC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013210 353 CLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 431 (447)
Q Consensus 353 ~~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 431 (447)
+|+++ +.+.+.+|++.|+... +++|+|+++|++++|+.++|..++.+ ..|+++++||||+| .|+.+++|++
T Consensus 310 s~~~~~~~~~~~~f~~~l~~~~----~~~s~G~~~sl~~~~~~~~~~~~~~~---~~gi~~~liR~svG-lE~~~dl~~d 381 (388)
T PRK07811 310 SVRLAGGEEAARDFCARTKVFT----LAESLGGVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVG-IEDVADLLAD 381 (388)
T ss_pred EEEeCCCHHHHHHHHHhCCcce----eeccCCCCcceEeCCcccCcccCCHh---hcCCCCCEEEEEeC-CCCHHHHHHH
Confidence 99997 5667889999999733 79999999999999999999988855 35999999999999 9999999999
Q ss_pred HHHHHHH
Q 013210 432 FEKALSR 438 (447)
Q Consensus 432 l~~al~~ 438 (447)
|.+||++
T Consensus 382 l~~al~~ 388 (388)
T PRK07811 382 LEQALGQ 388 (388)
T ss_pred HHHHhhC
Confidence 9999963
No 41
>PRK08064 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=7.3e-55 Score=432.77 Aligned_cols=376 Identities=33% Similarity=0.509 Sum_probs=331.9
Q ss_pred CchhhHhhh-cCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeE
Q 013210 39 EDPAAALAS-ARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAA 117 (447)
Q Consensus 39 ~~~~~~~~~-~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~ 117 (447)
+++.+.++| |+.....+|++++||+.++||.+++.+. ...|.|+|..+|..+.+++++|+++|++..
T Consensus 5 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~------------~~~~~y~r~~~p~~~~le~~lA~l~g~~~~ 72 (390)
T PRK08064 5 YSIDTLLLHNQYKHDKQTGAVNVPIYHASTFHQFDFDT------------FGKYDYSRSGNPTREALEDIIAELEGGTKG 72 (390)
T ss_pred CCcccceeeCCCCCCCCCCCccCCcccCcceecCcccc------------cCCCcccCCCChhHHHHHHHHHHHhCCCCe
Confidence 456666677 4333445799999999999998887532 124789999999999999999999999888
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCC
Q 013210 118 YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISN 197 (447)
Q Consensus 118 ~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~N 197 (447)
+++++|+.|+.+++. ++++||+|+++.+.|++++..+...+.+ .|+++.+++.+|++++++++ +++|++|++++|+|
T Consensus 73 v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~-~G~~v~~v~~~d~~~l~~~l-~~~tklV~l~~p~N 149 (390)
T PRK08064 73 FAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSR-FGIEHTFVDMTNLEEVAQNI-KPNTKLFYVETPSN 149 (390)
T ss_pred EEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHH-cCCEEEEECCCCHHHHHHhc-CCCceEEEEECCCC
Confidence 999999999998886 7789999999999999888777555555 79999999999999999999 78899999999999
Q ss_pred CCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhh
Q 013210 198 PTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQG 275 (447)
Q Consensus 198 ptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~ 275 (447)
|+|.+.|+++|.++|+++|+++++|++| .+....+.++|+|+++.|+||+++++++.++|+++. ++++++.++..+.
T Consensus 150 ptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~- 228 (390)
T PRK08064 150 PLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQN- 228 (390)
T ss_pred CCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCchhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHH-
Confidence 9999999999999999999999999999 444455667899999999999999888766798765 5678888887776
Q ss_pred hhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013210 276 ALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLC 353 (447)
Q Consensus 276 ~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 353 (447)
..|...++..++..+++++++..|++++.+++..+.++|++++. +++||+++++|++++++++++ |+|++++
T Consensus 229 ---~~g~~~~~~~a~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~---g~gg~~s 302 (390)
T PRK08064 229 ---SFGAVLGVQDCWLVLRGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQAT---SAGAVLS 302 (390)
T ss_pred ---hcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCC---CcceEEE
Confidence 57888888899999999999999999999999999999999875 899999999999999999876 7899999
Q ss_pred EEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHH
Q 013210 354 LDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFE 433 (447)
Q Consensus 354 ~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~ 433 (447)
|++++.+++.+|++.++... +++|+|+.+|++++|+.++|..++.+.+..+|+++++||+|+| .|+++++|++|.
T Consensus 303 f~~~~~~~~~~f~~~l~l~~----~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvG-le~~~dli~dl~ 377 (390)
T PRK08064 303 FTLQSEEAVRQFVSHVKLPV----FAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVG-LENVDDLIADFE 377 (390)
T ss_pred EEECCHHHHHHHHHhCCcce----EcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHH
Confidence 99998778889999998632 6999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHhhh
Q 013210 434 KALSRMQD 441 (447)
Q Consensus 434 ~al~~~~~ 441 (447)
+||+++++
T Consensus 378 ~Al~~~~~ 385 (390)
T PRK08064 378 QALSYVEE 385 (390)
T ss_pred HHHHhccc
Confidence 99998753
No 42
>PRK07050 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=2.7e-54 Score=428.59 Aligned_cols=377 Identities=24% Similarity=0.327 Sum_probs=326.8
Q ss_pred CchhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeE
Q 013210 39 EDPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAA 117 (447)
Q Consensus 39 ~~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~ 117 (447)
.++.+.++|+. .....+|++++|||.++||.+++.+++...+.+. ...|.|+|+++|+++++++.+|+++|++.+
T Consensus 8 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~----~~~~~Y~r~~~pt~~~Le~~lA~l~g~~~~ 83 (394)
T PRK07050 8 RALQTRIVQPDDQIPPGFRSFVTPVARASTVVFPDLATMRALDWRQ----DVQWRYGLHATPTSLALAQRLAEIEGGRHA 83 (394)
T ss_pred CCccchheECCCCCCCCCCCccCCeeCCcceecCCHHHHHhhcccc----cCCcccCCCCCHHHHHHHHHHHHHhCCCeE
Confidence 35667777754 3345579999999999999999988777666432 236889999999999999999999999999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCC
Q 013210 118 YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISN 197 (447)
Q Consensus 118 ~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~N 197 (447)
++|+||++|+.+++.+++++||+|+++.+.|+++...+...... .|+++++++..+.+++++++ +++|++|++++|+|
T Consensus 84 l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~-~Gi~v~~vd~~~~~~l~~~i-~~~tklV~le~p~N 161 (394)
T PRK07050 84 LLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARD-FGITVRFYDPLIGAGIADLI-QPNTRLIWLEAPGS 161 (394)
T ss_pred EEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHh-cCeEEEEECCCCHHHHHHhc-CCCCeEEEEECCCC
Confidence 99999999999999999999999999999999988766444444 79999999887888999999 78999999999999
Q ss_pred CCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhh
Q 013210 198 PTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQG 275 (447)
Q Consensus 198 ptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~ 275 (447)
|+|.+.|+++|+++|+++|+++|+|++| .+..+++..+|+|+++.|++|+++++++.+||+++. +++++++++..+.
T Consensus 162 p~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~- 240 (394)
T PRK07050 162 VTMEVPDVPAITAAARARGVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARM- 240 (394)
T ss_pred CCccHhhHHHHHHHHHHcCCEEEEECCcccccccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHH-
Confidence 9999999999999999999999999999 666788888999999999999999888776787654 7788888887766
Q ss_pred hhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013210 276 ALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLC 353 (447)
Q Consensus 276 ~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 353 (447)
..|..+++..++.++++++++..|++++.+++.+++++|++++. ++++|+++++|++.++++++. ++|++++
T Consensus 241 ---~~G~~~~~~~a~l~lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~---~~g~~~s 314 (394)
T PRK07050 241 ---RLGIGVSADDCSLVLRGLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFT---GAGGLFS 314 (394)
T ss_pred ---hcCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCC---CCceEEE
Confidence 56888899999999999999999999999999999999999875 899999999999999998875 6889999
Q ss_pred EEeCC---HHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHH
Q 013210 354 LDMET---EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWS 430 (447)
Q Consensus 354 ~~l~~---~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~ 430 (447)
|.+.+ .+.+.+|++.|+.. + +++|+|+++|+++ |+..++.... ...+.+++||||+| .|+.+++|+
T Consensus 315 ~~l~~~~~~~~~~~~~~~l~~~---~-~~~s~G~~~sl~~-~~~~~~~~~~-----~~~~~~~~iR~svG-lE~~~dl~~ 383 (394)
T PRK07050 315 VVFDERYSPAQVDAFVEALELF---A-IGWSWGGACSLAM-PYDVASMRTA-----KWPHRGTLVRLYIG-LEDEADLIA 383 (394)
T ss_pred EEECCCCCHHHHHHHHHcCCCC---e-eccccCCccceEe-eCcccccchh-----hcCCCCCEEEEEeC-cCCHHHHHH
Confidence 99973 46789999999974 3 7999999999997 6655544332 23366799999999 999999999
Q ss_pred HHHHHHHHh
Q 013210 431 QFEKALSRM 439 (447)
Q Consensus 431 ~l~~al~~~ 439 (447)
+|.+||++.
T Consensus 384 dl~~al~~~ 392 (394)
T PRK07050 384 DLEQALEAA 392 (394)
T ss_pred HHHHHHHHh
Confidence 999999865
No 43
>PRK06434 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=2.4e-54 Score=424.55 Aligned_cols=372 Identities=31% Similarity=0.496 Sum_probs=323.5
Q ss_pred chhhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEE
Q 013210 40 DPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (447)
Q Consensus 40 ~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~ 118 (447)
++.+.++|+. .....+|++++||+.++||.+++.+++....... ...|.|+|..+|+++++|+++|+++|++.++
T Consensus 8 ~~~t~~~~~~~~~~~~~~~~~~pI~~ss~~~~~~~~~~~~~~~~~----~~~~~Y~r~~~P~~~~lE~~la~leg~~~av 83 (384)
T PRK06434 8 GFNTRAVQSGELRDPRFGNVTTPIFETSTFVYPNSEKEAYMDSTR----GMPYIYTRWGNPTVQAFEEKYAVLENAEHAL 83 (384)
T ss_pred CcccceeECCCCCCCCCCCccCCeeCCcceecCChHHhhhccccc----cCCcceeCCCChhHHHHHHHHHHHhCCCcEE
Confidence 3566777754 3344579999999999999999886654222111 2358999999999999999999999999999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCC
Q 013210 119 CTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNP 198 (447)
Q Consensus 119 ~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Np 198 (447)
.++|||.|+.+++.+++++||+|+++...|+++...+...+.+ .|++++++|.++.+.++ +..+++++|++++|+||
T Consensus 84 ~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~-~Gi~v~fvd~~~~~~~~--l~~~~tklv~~e~~snp 160 (384)
T PRK06434 84 SFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKT-LGIHVDYIDTDRLNSLD--FDPSNYDLIYAESITNP 160 (384)
T ss_pred EeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHh-cCcEEEEECCCChhhee--ecCCCeeEEEEEcCCCC
Confidence 9999999999999999999999999999999988877666665 79999999987766665 52347999999999999
Q ss_pred CccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhh
Q 013210 199 TLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGA 276 (447)
Q Consensus 199 tG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~ 276 (447)
++.+.|+++|+++|++++ +++|+++ +++...|..+|+|++++|.+|+++++|+.+||+++. ++++.++++..+.
T Consensus 161 t~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~-- 236 (384)
T PRK06434 161 TLKVPDIKNVSSFCHEND--VIVDATFASPYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRK-- 236 (384)
T ss_pred CceeecHHHHHHHHHHcC--eEEECCCCCcccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHH--
Confidence 999999999999999998 4679999 667778888999999999999999999878898866 5667777765554
Q ss_pred hhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEE
Q 013210 277 LMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCL 354 (447)
Q Consensus 277 ~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~ 354 (447)
..|..+++..|++.+++++++..|++++++++..+.++|++++. +|+||+++ +++++++ |+|++++|
T Consensus 237 --~~G~~~~~~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~------~~~~~~~---g~g~~~sf 305 (384)
T PRK06434 237 --TLGSNPDPIQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTE------IGKKVLR---GFGGMLSF 305 (384)
T ss_pred --hcCCCCCHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChH------HHHHhcC---CCCceEEE
Confidence 56888889999999999999999999999999999999999986 89999974 7888875 78999999
Q ss_pred EeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 013210 355 DMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEK 434 (447)
Q Consensus 355 ~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~ 434 (447)
++++.+.+.+|++.|+... +++|+|+++|++++|++++|..++++.+..+|+++++||||+| .|+++++|++|.+
T Consensus 306 ~l~~~~~~~~f~~~l~l~~----~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvG-lEd~~dLi~dl~~ 380 (384)
T PRK06434 306 ELRSMEDVHKFIRNLEIPM----VAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIG-IEDIDDLIKDIEN 380 (384)
T ss_pred EECCHHHHHHHHHhCCcce----EccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeC-cCCHHHHHHHHHH
Confidence 9987777899999999733 6999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHH
Q 013210 435 ALSR 438 (447)
Q Consensus 435 al~~ 438 (447)
||++
T Consensus 381 Al~~ 384 (384)
T PRK06434 381 ALSK 384 (384)
T ss_pred HhcC
Confidence 9963
No 44
>PRK05968 hypothetical protein; Provisional
Probab=100.00 E-value=8.9e-53 Score=417.69 Aligned_cols=375 Identities=32% Similarity=0.472 Sum_probs=328.8
Q ss_pred hhHhhhcCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeC
Q 013210 42 AAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTA 121 (447)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~ts 121 (447)
...|+|+++....+++++||||.++||.+++.+++.+.+.+. ...+.|+|..+|+++++|+.+|+++|++..++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~r~~~p~~~~le~~lA~l~g~~~av~~~ 85 (389)
T PRK05968 10 LAALITAHDEGNAFDAVVPPIFQTSLFTFDSYDEMEDVYAGE----KVRPIYSRGDNPTVRAFEEMLAKLEGAEDARGFA 85 (389)
T ss_pred hhheeecCCCccCCCCccCCccCCcceecCCHHHHHHhhcCC----CCCccccCCCChhHHHHHHHHHHHhCCCcEEEEC
Confidence 467888888888899999999999999999998888887643 2458899999999999999999999999989999
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCcc
Q 013210 122 SGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLA 201 (447)
Q Consensus 122 ggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~ 201 (447)
||+.|+.+++.+++++||+|+++.+.|+++...+...+.. .|+++.+++.+|++++++++ ++|++|++++|+|+++.
T Consensus 86 sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~-~G~~v~~vd~~d~~~l~~~i--~~tklV~ie~pt~~~~~ 162 (389)
T PRK05968 86 SGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKR-MGVEVDYVDGRDEEAVAKAL--PGAKLLYLESPTSWVFE 162 (389)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHH-cCceEEEeCCCCHHHHHHhc--ccCCEEEEECCCCCCCc
Confidence 9999999999989999999999999999988777555554 79999999999999999988 46899999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhc
Q 013210 202 VANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLL 280 (447)
Q Consensus 202 v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~ 280 (447)
+.|+++|+++|+++|+++|+|++| .+....+..+|+|++++|+||+++++|+.+||+++++++++++++..+.. ..
T Consensus 163 ~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~---~~ 239 (389)
T PRK05968 163 LQDVAALAALAKRHGVVTMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYP---YL 239 (389)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHH---hC
Confidence 999999999999999999999999 44445677789999999999999998876679999999988887764431 35
Q ss_pred CCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013210 281 GPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 358 (447)
Q Consensus 281 g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 358 (447)
|..+++..|+.++++++++..|++++.+++++++++|++++. .+.+|+++++|. +++ .|+|++++|.+++
T Consensus 240 g~~~~~~~A~~~l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~-----~~~---~g~g~~~sf~~~~ 311 (389)
T PRK05968 240 GAKLSPFEAWLLLRGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPP-----AGL---SGTSGLFSFIFRE 311 (389)
T ss_pred CCCCChHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChH-----HhC---CCCceEEEEEECC
Confidence 667888999999999999999999999999999999999875 788999988884 222 2689999999986
Q ss_pred HHHHHHHHHHhhcccccccccccccCccccccccccccCCC-CCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013210 359 EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSE-LNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 437 (447)
Q Consensus 359 ~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~-~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 437 (447)
...+.+|+++|+.. + +++|+|+.+|+++ |++++|.. .+.+.++..|+++++||+|+| .|+++++|++|.+||+
T Consensus 312 ~~~~~~f~~~L~~~---~-~~~s~G~~~slv~-p~~~~~~~~~~~~~~~~~gi~~~liR~SvG-lE~~~dl~~dl~~al~ 385 (389)
T PRK05968 312 GIDVRAFADALKLF---R-LGVSWGGHESLVV-PAEVVLQQKAQPNSAARFGVSPRSVRLHVG-LEGTEALWADLEQALA 385 (389)
T ss_pred HHHHHHHHHhCCcc---E-EecCCCCCCceee-eCcccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHHHHHH
Confidence 55688999999874 3 7999999999998 88888777 457778889999999999999 9999999999999998
Q ss_pred Hhh
Q 013210 438 RMQ 440 (447)
Q Consensus 438 ~~~ 440 (447)
+..
T Consensus 386 ~~~ 388 (389)
T PRK05968 386 AAS 388 (389)
T ss_pred Hhh
Confidence 764
No 45
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=7.8e-53 Score=413.48 Aligned_cols=354 Identities=31% Similarity=0.465 Sum_probs=309.4
Q ss_pred CchhhHhhhcCC-CCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeE
Q 013210 39 EDPAAALASARH-EFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAA 117 (447)
Q Consensus 39 ~~~~~~~~~~~~-~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~ 117 (447)
+++.+.++|+.. ....+++++||||.++||.+++.. . ...|.|+|+.+|++.++|++||+++|++.+
T Consensus 5 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~-----------~-~~~~~Y~R~~~p~~~~le~~lA~leg~~~~ 72 (364)
T PRK07269 5 LHINTILAQAGIKSDEATGALVTPLHFSTTYQHPEFG-----------Q-STGFDYTRTKNPTRAKLEETLAAIESADYA 72 (364)
T ss_pred CCcccceeeCCCCCCCCCCCccCCccCCcceecCCCC-----------C-cCCcceeCCCCccHHHHHHHHHHHhCCCeE
Confidence 356677777553 334468999999999999887631 1 235899999999999999999999999999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCC
Q 013210 118 YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISN 197 (447)
Q Consensus 118 ~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~N 197 (447)
++++||++|+.+++. ++++||+||++.+.|++....+....+. .++.+.+. .|++++++++ +++|++|++++|+|
T Consensus 73 v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~-~~~~~~~~--~d~~~l~~~i-~~~TklV~lesP~N 147 (364)
T PRK07269 73 LATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKE-GRFHFTYA--NTEEELIAAI-EEDTDIVYIETPTN 147 (364)
T ss_pred EEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhc-CcEEEEec--CCHHHHHHhc-CcCceEEEEECCCC
Confidence 999999999999984 6789999999999999888766444443 35555553 4899999999 78999999999999
Q ss_pred CCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhh
Q 013210 198 PTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQG 275 (447)
Q Consensus 198 ptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~ 275 (447)
|+|.+.|+++|+++|+++|+++++|++| .++...+...|+|++++|+||+++++|+.+||+++. +++++++++..+.
T Consensus 148 Ptg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~- 226 (364)
T PRK07269 148 PLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLN- 226 (364)
T ss_pred CCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHH-
Confidence 9999999999999999999999999998 666678888899999999999999999988899876 5677787775554
Q ss_pred hhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013210 276 ALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLC 353 (447)
Q Consensus 276 ~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 353 (447)
..|..+++..|++++++++++..|++++++++..++++|++++. ++.||+ .|++++
T Consensus 227 ---~~G~~~s~~~a~l~~~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg-------------------~gg~~s 284 (364)
T PRK07269 227 ---TTGAVLSPFDSYLLMRGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG-------------------KGGMIS 284 (364)
T ss_pred ---HhCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC-------------------cCcEEE
Confidence 56788999999999999999999999999999999999999874 788885 688999
Q ss_pred EEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHH
Q 013210 354 LDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFE 433 (447)
Q Consensus 354 ~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~ 433 (447)
|.+.+.+.+.+|++.++... +++|+|+.+|++++|+..+|..++.+.+..+|+++++||||+| .|+.+++|++|+
T Consensus 285 f~~~~~~~~~~f~~~l~~~~----~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvG-lE~~~dli~dl~ 359 (364)
T PRK07269 285 FKVADETRIPHILNSLKVFT----FAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIG-IEDARDLIADLK 359 (364)
T ss_pred EEECCHHHHHHHHHhCCcce----EccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHH
Confidence 99987777889999998633 7999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHH
Q 013210 434 KALS 437 (447)
Q Consensus 434 ~al~ 437 (447)
+||+
T Consensus 360 ~al~ 363 (364)
T PRK07269 360 QALE 363 (364)
T ss_pred HHhc
Confidence 9985
No 46
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=1.6e-50 Score=399.21 Aligned_cols=356 Identities=28% Similarity=0.486 Sum_probs=309.0
Q ss_pred hhhHhhh-cCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEE
Q 013210 41 PAAALAS-ARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (447)
Q Consensus 41 ~~~~~~~-~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~ 119 (447)
+.+.++| |+.....+|+++||||.+|||.+++.. . ...|.|+|+.+|+.+.|++++|+++|++..++
T Consensus 5 ~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~-----------~-~~~~~y~r~~~pt~~~le~~la~l~g~~~~~~ 72 (366)
T PRK08247 5 IETKLAQIGNRSDERTGTVNPPVYFSTAYRHEGIG-----------E-STGFDYSRTGNPTRGVLEQAIADLEGGDQGFA 72 (366)
T ss_pred cchhheeCCCCCCCCCCCccCCcccCcccccCCCC-----------C-cCCccccCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 4455666 433344579999999999999877621 1 23589999999999999999999999999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCC
Q 013210 120 TASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPT 199 (447)
Q Consensus 120 tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Npt 199 (447)
++||++|+.+++ .++++||+|+++.+.|+++...+...+.+ .|+++.+++..|++++++++ +++|++|++++|+||+
T Consensus 73 ~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~-~G~~v~~vd~~d~~~l~~~i-~~~tklv~le~P~NP~ 149 (366)
T PRK08247 73 CSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKK-WNVRFVYVNTASLKAIEQAI-TPNTKAIFIETPTNPL 149 (366)
T ss_pred EcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhc-cCceEEEECCCCHHHHHHhc-ccCceEEEEECCCCCC
Confidence 999999999876 57889999999999999988777655555 79999999999999999999 7789999999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcC-hHHHHHHHHHhhhhh
Q 013210 200 LAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGP-ANLVNSMMDLHQGAL 277 (447)
Q Consensus 200 G~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~-~~~~~~l~~~~~~~~ 277 (447)
|.+.++++|+++|+++|+++|+|++| .++...+...++|++++|+||+++++++.++|+++.+ +++.+.+...+.
T Consensus 150 ~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~--- 226 (366)
T PRK08247 150 MQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQN--- 226 (366)
T ss_pred CcHHHHHHHHHHHHHcCCEEEEECCCccccccCchhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHH---
Confidence 99999999999999999999999999 6666677777999999999999999887777999886 677777776665
Q ss_pred hhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013210 278 MLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 355 (447)
Q Consensus 278 ~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 355 (447)
..+..+++..+++++++++++..++++++++++.+.++|++++. .+.+|+ .|++++|.
T Consensus 227 -~~g~~~s~~~a~l~~~~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~-------------------~gg~~sf~ 286 (366)
T PRK08247 227 -AAGAVLSPFDSWLLIRGMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPG-------------------RGGMLSFR 286 (366)
T ss_pred -hcCCCCChHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCC-------------------cCcEEEEE
Confidence 45666778888888899999999999999999999999999864 466764 57899999
Q ss_pred eCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHH
Q 013210 356 METEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKA 435 (447)
Q Consensus 356 l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~a 435 (447)
+++.+.+.+|++.++... +++|+|+.++++.+|+..+|..++.+.+..+|+++++||||+| .|+.+++|++|++|
T Consensus 287 ~~~~~~~~~~~~~l~~~~----~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svG-lE~~~dl~~dl~~a 361 (366)
T PRK08247 287 LQDEEWVNPFLKSLKLIT----FAESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVG-IENVEDLIADLKQA 361 (366)
T ss_pred ECCHHHHHHHHHcCCcce----EccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHHHH
Confidence 987666778999888633 7999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHh
Q 013210 436 LSRM 439 (447)
Q Consensus 436 l~~~ 439 (447)
|+++
T Consensus 362 l~~~ 365 (366)
T PRK08247 362 FKQV 365 (366)
T ss_pred Hhhc
Confidence 9863
No 47
>PRK07582 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=1.3e-50 Score=399.42 Aligned_cols=357 Identities=28% Similarity=0.365 Sum_probs=302.8
Q ss_pred hhHhhhcC-CCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEe
Q 013210 42 AAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCT 120 (447)
Q Consensus 42 ~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~t 120 (447)
.++++|+. .....++++++|||.++||.+++.+ . ...+.|+|+.+|...+++++||+++ .+.++++
T Consensus 5 ~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~--------~----~~~~~y~ry~~p~~~~Le~~lA~l~-~~~~v~~ 71 (366)
T PRK07582 5 GTRSVHAGGPEAVPGEPVLPGPVFAAPYHLSPGE--------P----TGPDTYGRASNPTWRALEAALGELE-GAEALVF 71 (366)
T ss_pred ccceeeCCCCCCCCCCCccCCccccceEEccCcc--------c----cCCceeECCCCccHHHHHHHHHHHc-CCCEEEE
Confidence 35556643 3344468999999999999988531 1 2347899999999999999999999 6778899
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCc
Q 013210 121 ASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTL 200 (447)
Q Consensus 121 sggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG 200 (447)
+||++|+.+++.+++++||+|+++.+.|+++...+...+.+ .|+++++++.++... .+ .+++++|++++|+||+|
T Consensus 72 ~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~-~G~~v~~v~~~~~~~---~~-~~~t~lV~le~p~NPtg 146 (366)
T PRK07582 72 PSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAP-LGVTVREAPTAGMAE---AA-LAGADLVLAETPSNPGL 146 (366)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhc-CeEEEEEECCCChHH---Hh-ccCceEEEEECCCCCCC
Confidence 99999999999999999999999999999888776545555 799999998765432 33 46899999999999999
Q ss_pred cccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhhh
Q 013210 201 AVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGALM 278 (447)
Q Consensus 201 ~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~ 278 (447)
.+.|+++|+++|+++|+++++|++| .+....+.++++|++++|+||+++++++..+||++. ++++++.++..+.
T Consensus 147 ~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~---- 222 (366)
T PRK07582 147 DVCDLAALAAAAHAAGALLVVDNTTATPLGQRPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRL---- 222 (366)
T ss_pred CccCHHHHHHHHHHcCCEEEEECCCCCccccCchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHH----
Confidence 9999999999999999999999998 455567777899999999999998766545698886 5788888887766
Q ss_pred hcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEe
Q 013210 279 LLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDM 356 (447)
Q Consensus 279 ~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l 356 (447)
..|..+++..++.++++++++..|++++.+++..++++|++++. +|.||+++++|+|++++++++ |+|++++|++
T Consensus 223 ~~g~~~~~~~a~l~~r~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~---~~gg~~s~~~ 299 (366)
T PRK07582 223 LAGAIPGPFEAWLAHRSLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMR---RFGGLVSFEL 299 (366)
T ss_pred HhCCCCCHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCC---CCcceEEEEe
Confidence 56778889999999999999999999999999999999999976 899999999999999999986 6899999999
Q ss_pred CCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013210 357 ETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 436 (447)
Q Consensus 357 ~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 436 (447)
++.+.+.+|+++++... +++|+|+++|++.++... ..++++++||+|+| .|+++++|++|.+||
T Consensus 300 ~~~~~~~~~~~~l~~~~----~~~s~G~~~sl~~~~~~~-----------~~~~~~~liR~svG-lE~~~dli~dl~~al 363 (366)
T PRK07582 300 ADAAAAERFVAASRLVV----AATSFGGVHTSADRRARW-----------GDAVPEGFVRLSCG-IEDTDDLVADLERAL 363 (366)
T ss_pred CCHHHHHHHHHhCCcce----ecccCCCccchhhhHHHc-----------CCCCCCCeEEEEec-cCCHHHHHHHHHHHH
Confidence 98888889999998633 699999999987543321 12467899999999 999999999999999
Q ss_pred HHh
Q 013210 437 SRM 439 (447)
Q Consensus 437 ~~~ 439 (447)
+++
T Consensus 364 ~~~ 366 (366)
T PRK07582 364 DAL 366 (366)
T ss_pred hhC
Confidence 864
No 48
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-50 Score=383.31 Aligned_cols=342 Identities=18% Similarity=0.187 Sum_probs=284.1
Q ss_pred ccccccccCCH-HHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHh--c--
Q 013210 63 EASATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQL--C-- 135 (447)
Q Consensus 63 ~~att~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l--~-- 135 (447)
|+|||+++|++ +.|.+++...||||+|.|.||+.+...++++|++||+++|++ .++|||||||+++++|++. .
T Consensus 7 ~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~ 86 (386)
T COG1104 7 NAATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYR 86 (386)
T ss_pred ccccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhh
Confidence 58999999998 999999999999999999999999999999999999999985 4999999999999999983 2
Q ss_pred --CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHH
Q 013210 136 --SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPEL 208 (447)
Q Consensus 136 --~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I 208 (447)
+.|+|||++..+|+++.+.++.+ .+ .|++|++++++ |+++|++++ +++|.+|+++++||++|+++|+++|
T Consensus 87 ~~~~~~HIIts~iEH~aVl~~~~~L-e~-~g~~Vtyl~V~~~G~v~~e~L~~al-~~~T~LVSim~aNnE~G~IQpI~ei 163 (386)
T COG1104 87 NAQKGKHIITSAIEHPAVLNTCRYL-ER-QGFEVTYLPVDSNGLVDLEQLEEAL-RPDTILVSIMHANNETGTIQPIAEI 163 (386)
T ss_pred cccCCCeEEEcccccHHHHHHHHHH-Hh-cCCeEEEeCCCCCCeEcHHHHHHhc-CCCceEEEEEecccCeeecccHHHH
Confidence 24789999999999999999555 44 69999999987 999999999 8899999999999999999999999
Q ss_pred HHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHH-HH-HHHHHhhhhhhhcCCCc
Q 013210 209 SRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANL-VN-SMMDLHQGALMLLGPTM 284 (447)
Q Consensus 209 ~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~-~~-~l~~~~~~~~~~~g~~~ 284 (447)
+++|+++|++||+|++| +++++++..+++|++++|.||++|++| + |+++.++.. +. .+....+......|+..
T Consensus 164 ~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~GpkG--i-GaLyv~~~~~~~p~i~GGgQE~g~RsGTen 240 (386)
T COG1104 164 GEICKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKFGGPKG--I-GALYVRPGVRLEPLIHGGGQERGLRSGTEN 240 (386)
T ss_pred HHHHHHcCCeEEEehhhhcCceeccccccCcceEEeehhhccCCCc--e-EEEEECCCCccCceeccCcCCCCCCCCCcc
Confidence 99999999999999999 789999999999999999999999998 5 777765543 22 23333333334555544
Q ss_pred cHHHHHH---HHccCCcHHHHHHHHHHHHHHHHHHHHhC-CC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH
Q 013210 285 NPKVAFE---LSERIPHLGLRMKEHCHRALIFARRMKKL-GL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE 359 (447)
Q Consensus 285 ~~~~a~~---~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~ 359 (447)
.+..+.. +....+.+....+++..++++|.+.|.+. +. .++....++.|+ +++|.|++.
T Consensus 241 v~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~----------------~~~~~f~gv 304 (386)
T COG1104 241 VPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPN----------------ILNFSFPGV 304 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCC----------------eEEEEeCCC
Confidence 4333222 22234556778888999999999999876 44 344332344554 999999976
Q ss_pred HHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCC----CeEEEEeCCCCCHHHHHHHHHHH
Q 013210 360 EKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISA----GLVRMSVGYLGTLDQRWSQFEKA 435 (447)
Q Consensus 360 ~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~----~~iRiS~g~~~~~~~~i~~l~~a 435 (447)
+ .+.++..|+..+ |++|.| |||++.+..+++++.+||+++ +.||||+| ..+++++++.+.++
T Consensus 305 ~-gE~ll~~L~~~g----I~vStG--------SACsS~~~~pShVL~AmG~~~e~a~~siR~S~g-~~tt~eei~~~~~~ 370 (386)
T COG1104 305 E-GESLLLALDLAG----IAVSTG--------SACSSGSLEPSHVLRAMGISEELAHGSIRFSLG-RFTTEEEIDAAAEA 370 (386)
T ss_pred c-HHHHHHhccccC----eEEecc--------ccccCCCCCccHHHHHcCCChHHhCccEEEEcC-CCCCHHHHHHHHHH
Confidence 5 788888888755 899999 889999999999999999974 68999999 99999998888888
Q ss_pred HHHhh
Q 013210 436 LSRMQ 440 (447)
Q Consensus 436 l~~~~ 440 (447)
+.++-
T Consensus 371 l~~~i 375 (386)
T COG1104 371 LKEII 375 (386)
T ss_pred HHHHH
Confidence 77653
No 49
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-35 Score=282.43 Aligned_cols=338 Identities=17% Similarity=0.165 Sum_probs=247.6
Q ss_pred cccccccCCH-HHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCe--EEEeCChHHHHHHHHHHhc-CCCC
Q 013210 64 ASATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEA--AYCTASGMSAISSVLMQLC-SSGG 139 (447)
Q Consensus 64 ~att~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~--~~~tsggt~A~~~al~~l~-~~gd 139 (447)
+||++..+.+ ++|.+++.+.++||.+. .|+..+...++++|+++|+++|++. |+||+++|||++++++++. ..++
T Consensus 50 ~at~p~~~~Vldam~~~~~~~~~nPh~~-~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v~~~~~~ 128 (428)
T KOG1549|consen 50 QATGPMDPRVLDAMLPYLLEYLGNPHSR-SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVLKGVARFFGD 128 (428)
T ss_pred CcCCCCCHHHHHHHHHHHHHhhcCCCcc-ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHHHHhhccccc
Confidence 6777887787 99999999999999988 8999999999999999999999854 9999999999999999874 3455
Q ss_pred ----eEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHH
Q 013210 140 ----HVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSR 210 (447)
Q Consensus 140 ----~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~ 210 (447)
+||+...+|+++...++.+.. .|+++++++.. |.+.++++| +++|++|.|+++||++|.++|+++|.+
T Consensus 129 ~~~k~iitl~~eH~~v~~s~~~l~~--~g~~Vt~lpv~~~~~~d~~~~~~~i-~~~T~lv~I~~Vnn~~gv~~Pv~EI~~ 205 (428)
T KOG1549|consen 129 KTKKHIITLQTEHPCVLDSCRALQE--EGLEVTYLPVEDSGLVDISKLREAI-RSKTRLVSIMHVNNEIGVLQPVKEIVK 205 (428)
T ss_pred cccceEEEecccCcchhHHHHHHHh--cCeEEEEeccCccccccHHHHHHhc-CCCceEEEEEecccCccccccHHHHHH
Confidence 999999999999999865544 58999999876 889999999 899999999999999999999999999
Q ss_pred HHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChH---HH--HHHHHHhhhhhhhcCCC
Q 013210 211 LAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAN---LV--NSMMDLHQGALMLLGPT 283 (447)
Q Consensus 211 la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~---~~--~~l~~~~~~~~~~~g~~ 283 (447)
+|+++|+.+|+|++| +....+..++++|+++.|+||+||++| + |+++.++. +. ..+....+......|+.
T Consensus 206 icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~ygp~~--i-GaLYvr~~~~~~~~~p~~~GGgq~r~~rsGT~ 282 (428)
T KOG1549|consen 206 ICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIYGPPG--I-GALYVRRKRPRLRVEPPLSGGGQERGLRSGTV 282 (428)
T ss_pred HhCcCCcEEEeehhhhcCCccccHHHcCchheeeecccccCCCc--c-eEEEEccCCCcccccCcccCCccccccccCCc
Confidence 999999999999999 788899999999999999999999998 5 89987751 11 11111111111123333
Q ss_pred ccHHHHHH--HHccCCcHHHHHH-HHHHHHHHHHHHHHh-CCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013210 284 MNPKVAFE--LSERIPHLGLRMK-EHCHRALIFARRMKK-LGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 358 (447)
Q Consensus 284 ~~~~~a~~--~~~~~~~l~~~~~-~~~~~~~~l~~~L~~-~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 358 (447)
..+..... +.+-........+ ...++...+...+.. .+. .++.++.. .+.++++|.++.
T Consensus 283 ~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~----------------~~~~~~~~~~~~ 346 (428)
T KOG1549|consen 283 ATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKS----------------RYPGLVSLSFPY 346 (428)
T ss_pred CchhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhhCchhhccCCccc----------------ccccceeeeccc
Confidence 22222111 1111111111111 122333444444422 211 23333311 245588888873
Q ss_pred HHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCC----CeEEEEeCCCCCHHHHHHHHHH
Q 013210 359 EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISA----GLVRMSVGYLGTLDQRWSQFEK 434 (447)
Q Consensus 359 ~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~----~~iRiS~g~~~~~~~~i~~l~~ 434 (447)
.+ ...++..++. ++.+.| ++|.+....++..+.+.|.+. ..||||+| ..+++++++.+.+
T Consensus 347 ~~-g~~~~~~~~~------~~l~s~--------~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G-~y~t~~di~~~~~ 410 (428)
T KOG1549|consen 347 VE-GESLLMDLKD------VALSSG--------SACTSASLEPSYVLRAIGVDEDLAHSSIRISIG-RYTTEEDIDYLVD 410 (428)
T ss_pred cc-Ccchhhhhhh------hhhccc--------chhhcCCCCcchhhhhcCcchhhhcceeEEeee-eeCcHHHHHHHHH
Confidence 32 3455556665 677877 666665556777888888743 57999999 9999999999998
Q ss_pred HHHHhh
Q 013210 435 ALSRMQ 440 (447)
Q Consensus 435 al~~~~ 440 (447)
++.+..
T Consensus 411 ~i~~~v 416 (428)
T KOG1549|consen 411 AIKKLV 416 (428)
T ss_pred HHHHHH
Confidence 887764
No 50
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=5.7e-33 Score=276.87 Aligned_cols=342 Identities=14% Similarity=0.125 Sum_probs=246.4
Q ss_pred ccccccccCCH-HHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCC---CeEEEeCChHHHHHHHHHHhc---
Q 013210 63 EASATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGT---EAAYCTASGMSAISSVLMQLC--- 135 (447)
Q Consensus 63 ~~att~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~---~~~~~tsggt~A~~~al~~l~--- 135 (447)
+++||+..+.+ +.+.+++...++||.+.|.|+....+.+++.++++++.+++ +.++||+|+++++++++.++.
T Consensus 5 ~aa~~~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~ 84 (382)
T TIGR03403 5 NNATTMLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDE 84 (382)
T ss_pred CcCCCCCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhh
Confidence 45777777777 88888888888999988888877777777888888877764 569999999999999998762
Q ss_pred --CC-CCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHH
Q 013210 136 --SS-GGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPE 207 (447)
Q Consensus 136 --~~-gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~ 207 (447)
++ +++|+++..+|+++...+. .+.. .|.++.+++.+ |++++++++ ++++++|++++++||||.+.|+++
T Consensus 85 ~~~~~~~~vi~~~~e~ps~~~~~~-~~~~-~G~~v~~v~~~~~g~~d~~~l~~~i-~~~t~lv~~~~~~n~tG~~~~~~~ 161 (382)
T TIGR03403 85 ILKGGKNHIITTEVEHPAVRATCA-FLES-LGVEVTYLPINEQGTITAEQVREAI-TEKTALVSVMWANNETGMIFPIKE 161 (382)
T ss_pred cccCCCCEEEEcCCccHHHHHHHH-HHHH-CCCEEEEEecCCCCCCCHHHHHHhc-ccCCeEEEEEcccCCCccccCHHH
Confidence 45 4689999999999887763 3333 68899888764 789999999 778999999999999999999999
Q ss_pred HHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHH-HH-HHHHhhhhhhhcCCC
Q 013210 208 LSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLV-NS-MMDLHQGALMLLGPT 283 (447)
Q Consensus 208 I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~-~~-l~~~~~~~~~~~g~~ 283 (447)
|.++|+++|+++|+|+++ +....+..+.++|+++.|+||++|++| + |+++.++... .. +...........|+.
T Consensus 162 I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G--~-g~l~vr~~~~~~p~~~g~~~~~~~~~gt~ 238 (382)
T TIGR03403 162 IGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFHGPKG--V-GGLYIRKGVELTPLFHGGEHMGGRRSGTL 238 (382)
T ss_pred HHHHHHHcCCEEEEechhhcCCCccCccccCCCEEEEcchhhCCCCc--e-EEEEECCCCCCCCcccCCCCCCCcccCCc
Confidence 999999999999999998 345566677799999999999999888 4 7776554321 11 100000000112222
Q ss_pred cc-HH-HHHHHHccC-CcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH
Q 013210 284 MN-PK-VAFELSERI-PHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE 359 (447)
Q Consensus 284 ~~-~~-~a~~~~~~~-~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~ 359 (447)
.. .. ++..+++.. +.+....++..++++++.+.|++++. ++..+.-.. .+.++.|.+++.
T Consensus 239 ~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~ 302 (382)
T TIGR03403 239 NVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHR----------------VPNTILISIKGV 302 (382)
T ss_pred ChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCC----------------cCCEEEEEeCCC
Confidence 21 11 222222221 22444556778888899999987654 555432112 223778888753
Q ss_pred HHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCC----CCeEEEEeCCCCCHHHHHHHHHHH
Q 013210 360 EKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGIS----AGLVRMSVGYLGTLDQRWSQFEKA 435 (447)
Q Consensus 360 ~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~----~~~iRiS~g~~~~~~~~i~~l~~a 435 (447)
+ ...+...|... | |.++.| +.|.+....++.++.++|.+ .+.||+|++ ..+++++|+.|.++
T Consensus 303 ~-~~~~~~~L~~~---g-I~v~~g--------~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~-~~~t~~did~~~~~ 368 (382)
T TIGR03403 303 E-GEAMLWDLNKA---G-IAASTG--------SACASEDLEANPVMVAIGADKELAHTAIRLSLS-RFTTEEEIDYTIEV 368 (382)
T ss_pred C-HHHHHHhhccC---C-EEEEch--------hccCCCCCCcCHHHHHcCCChHHhCeeEEEECC-CCCCHHHHHHHHHH
Confidence 3 45566667653 3 788888 44444444556788888875 378999999 99999999999999
Q ss_pred HHHhh
Q 013210 436 LSRMQ 440 (447)
Q Consensus 436 l~~~~ 440 (447)
|+++.
T Consensus 369 l~~~~ 373 (382)
T TIGR03403 369 FKKAV 373 (382)
T ss_pred HHHHH
Confidence 87654
No 51
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.9e-32 Score=269.51 Aligned_cols=336 Identities=17% Similarity=0.191 Sum_probs=253.0
Q ss_pred cccccccCCH-HHHHHhhcCCCCCCC-CCccccCCCCchHHHHHHHHHHHhCCCe---EEEeCChHHHHHHHHHHh---c
Q 013210 64 ASATFTVMEP-ETMRRMFAGELGPDR-DFFIYSRHFNPTVLNLSRQMAALEGTEA---AYCTASGMSAISSVLMQL---C 135 (447)
Q Consensus 64 ~att~~~~~~-~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~l~~~ia~l~g~~~---~~~tsggt~A~~~al~~l---~ 135 (447)
.+++.....+ +.+.+++...++|.. +.|..+.......+++|+.+|+++|++. |+||++.|+|++.++.++ +
T Consensus 29 aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~ 108 (405)
T COG0520 29 AATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSL 108 (405)
T ss_pred cccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhh
Confidence 3444422234 788888877777765 5677777777888999999999999763 999999999999999988 6
Q ss_pred CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHH
Q 013210 136 SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSR 210 (447)
Q Consensus 136 ~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~ 210 (447)
++||+||++..+|++....|.....+ .|+++++++.+ ++++++..+ +++|++|.+.+++|.||.+.|+++|++
T Consensus 109 ~~gdeIv~s~~EH~sn~~pw~~~~~~-~Ga~v~~i~~~~~g~~~~~~~~~~i-~~~Tklvais~vSn~tG~~~pv~~I~~ 186 (405)
T COG0520 109 KPGDEIVVSDLEHHSNIVPWQELAKR-TGAKVRVIPLDDDGLLDLDALEKLI-TPKTKLVALSHVSNVTGTVNPVKEIAE 186 (405)
T ss_pred cCCCEEEEccCcchhhHHHHHHHHHh-cCcEEEEEecCCCCCcCHHHHHHhc-CCCceEEEEECccccccccchHHHHHH
Confidence 88999999999999999999766665 79999998864 689999988 899999999999999999999999999
Q ss_pred HHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCC-CCeeEEEEEcChHHHHHHHHHhhhh-----------
Q 013210 211 LAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGG-ADIIAGAVCGPANLVNSMMDLHQGA----------- 276 (447)
Q Consensus 211 la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~-g~~igG~l~~~~~~~~~l~~~~~~~----------- 276 (447)
+||++|+++++|.+| +.++.++.++|+|++.+|.|||+.+| | + |++++++++++.+.+...++
T Consensus 187 la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~G--i-GvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~ 263 (405)
T COG0520 187 LAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTG--I-GVLYVRKELLEELEPFLGGGGMIEYVSRDEG 263 (405)
T ss_pred HHHHcCCEEEEECccccCccCCCchhcCCCEEEEcccccccCCCc--e-EEEEEchHHHhhcCCcccCCCceeeeccccc
Confidence 999999999999998 66788888999999999999955555 5 5 99999999998773321111
Q ss_pred -------hhhcCCCccHHHHHH---HHccCCc--HHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhc
Q 013210 277 -------LMLLGPTMNPKVAFE---LSERIPH--LGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMAN 343 (447)
Q Consensus 277 -------~~~~g~~~~~~~a~~---~~~~~~~--l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~ 343 (447)
...-..++....+.. +++.+.. +....++.+++.+++.+.|++++. ++..|.. .
T Consensus 264 ~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~-~------------ 330 (405)
T COG0520 264 VTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPD-A------------ 330 (405)
T ss_pred ccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc-c------------
Confidence 111122222222221 1221111 234445568888899999998875 7776652 0
Q ss_pred cCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCC
Q 013210 344 KEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLG 423 (447)
Q Consensus 344 ~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~ 423 (447)
..+++++|.+++.. ...+...|... | |++..|..|... . .+..+++ +.+|+|++ ..
T Consensus 331 ---~r~~~vsF~v~~~~-~~dv~~~L~~~---g-I~vr~g~~ca~p---~-----------~~~~~~~-~~iR~S~~-~Y 386 (405)
T COG0520 331 ---DRGGIVSFNVKGIH-PHDVATLLDEK---G-IAVRAGHHCAQP---L-----------HRLLGVD-ATIRASLH-LY 386 (405)
T ss_pred ---cCceEEEEEeCCCC-HHHHHHHHHhC---C-eEEEeccccccH---H-----------HHhcCCC-CceEEEEe-ec
Confidence 25679999998653 45666666653 3 788888543221 0 1223443 44999999 99
Q ss_pred CHHHHHHHHHHHHHHhhh
Q 013210 424 TLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 424 ~~~~~i~~l~~al~~~~~ 441 (447)
+++++|+.|.++|+++.+
T Consensus 387 Nt~edid~l~~aL~~~~~ 404 (405)
T COG0520 387 NTEEDVDRLLEALKKALA 404 (405)
T ss_pred CCHHHHHHHHHHHHHHhh
Confidence 999999999999998753
No 52
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=1.2e-32 Score=274.46 Aligned_cols=344 Identities=15% Similarity=0.152 Sum_probs=249.1
Q ss_pred cccccccCCH-HHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhc----C
Q 013210 64 ASATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLC----S 136 (447)
Q Consensus 64 ~att~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~----~ 136 (447)
+++++..+.+ +++.+.++..++||++.|..++......+++|+.+|+++|+ +.+++|+|+++++..++.+++ +
T Consensus 7 a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~ 86 (381)
T PRK02948 7 AATTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQ 86 (381)
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccC
Confidence 4566665566 88888888778888888887777777889999999999986 459999999999999988775 5
Q ss_pred CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHH
Q 013210 137 SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRL 211 (447)
Q Consensus 137 ~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~l 211 (447)
+|++|+++..+|+++...+. .+.. .|.++..++.+ |+++|++++ ++++++|++++++||||.+.|+++|.++
T Consensus 87 ~g~~vv~~~~~h~s~~~~~~-~~~~-~g~~v~~v~~~~~~~~d~~~l~~~l-~~~~~lv~~~~~~n~tG~~~~~~~I~~l 163 (381)
T PRK02948 87 NKKHIITTPMEHASIHSYFQ-SLES-QGYTVTEIPVDKSGLIRLVDLERAI-TPDTVLASIQHANSEIGTIQPIAEIGAL 163 (381)
T ss_pred CCCEEEECCcccHHHHHHHH-HHHh-CCCEEEEEeeCCCCCCCHHHHHHhc-CCCCEEEEEECCcCCcEeehhHHHHHHH
Confidence 68999999999998877763 3333 68888877653 789999998 7789999999999999999999999999
Q ss_pred HHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHH-HHHHHHHh-hhhhhhcCCC--cc
Q 013210 212 AHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANL-VNSMMDLH-QGALMLLGPT--MN 285 (447)
Q Consensus 212 a~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~-~~~l~~~~-~~~~~~~g~~--~~ 285 (447)
|+++|+++|+|+++ +....+..++++|+++.|+||++|++| + |+++.++++ +..+.... .......++. +.
T Consensus 164 ~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G--~-G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 240 (381)
T PRK02948 164 LKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIYGPKG--V-GAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPG 240 (381)
T ss_pred HHHcCCEEEEEChhhccccccCcccCCCCEEEecHHhcCCCCc--E-EEEEEcCCCCCCCcccCCCCCCCcCCCCccHHH
Confidence 99999999999887 444556667799999999999999888 4 777766554 11111000 0000012222 22
Q ss_pred HHHHHHHHccC-CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHH
Q 013210 286 PKVAFELSERI-PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANR 364 (447)
Q Consensus 286 ~~~a~~~~~~~-~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~ 364 (447)
..++..++... +.+.+..+++.++++++.+.|++.+.++...+.. .+ ....+++|.+++.. ...
T Consensus 241 ~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~-~~-------------~~~~i~~~~~~~~~-~~~ 305 (381)
T PRK02948 241 IAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHS-TS-------------CLPHIIGVTIKGIE-GQY 305 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCC-cc-------------CcCCEEEEEeCCCC-HHH
Confidence 22222333322 4456667788999999999999887644322101 00 12347888877433 355
Q ss_pred HHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 365 LMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGIS----AGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 365 l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~----~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
+...|.. .| |.++.| ++|.+....+++++.++|.+ .+.||||+| ..+++++++.+.++|+++.
T Consensus 306 ~~~~l~~---~g-I~v~~g--------~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~-~~~t~~di~~l~~~l~~~~ 372 (381)
T PRK02948 306 TMLECNR---RG-IAISTG--------SACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFG-QQTTKDQIDTTIHALETIG 372 (381)
T ss_pred HHHhccc---CC-EEEEch--------HhcCCCCCCCCHHHHHcCCChHHhCceEEEEcC-CCCCHHHHHHHHHHHHHHH
Confidence 6666654 34 677877 44544445567778888863 478999999 9999999999999998764
Q ss_pred h
Q 013210 441 D 441 (447)
Q Consensus 441 ~ 441 (447)
+
T Consensus 373 ~ 373 (381)
T PRK02948 373 N 373 (381)
T ss_pred H
Confidence 3
No 53
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=2.7e-32 Score=274.10 Aligned_cols=334 Identities=16% Similarity=0.180 Sum_probs=239.7
Q ss_pred cccccccCCH-HHHHHhhcCCCCCCC-CCccccCCCCchHHHHHHHHHHHhCC---CeEEEeCChHHHHHHHHHHh----
Q 013210 64 ASATFTVMEP-ETMRRMFAGELGPDR-DFFIYSRHFNPTVLNLSRQMAALEGT---EAAYCTASGMSAISSVLMQL---- 134 (447)
Q Consensus 64 ~att~~~~~~-~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~l~~~ia~l~g~---~~~~~tsggt~A~~~al~~l---- 134 (447)
+++++..+.+ +.+.++++..++|+. +.|..++......+++|+.+|+++|+ +.++||+|+|++++.++.++
T Consensus 30 a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~ 109 (406)
T PRK09295 30 AASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNSN 109 (406)
T ss_pred cccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhc
Confidence 4555655555 888888877777774 45665666677789999999999986 35999999999999998763
Q ss_pred cCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHH
Q 013210 135 CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELS 209 (447)
Q Consensus 135 ~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~ 209 (447)
+++||+|+++.++|++....+.....+ .|++++.++.+ |+++|++++ +++|++|++++++||||.++|+++|.
T Consensus 110 ~~~gd~vl~~~~~~~s~~~~~~~~~~~-~g~~v~~v~~~~~~~~d~~~l~~~i-~~~t~lv~l~~~~n~tG~~~~~~~i~ 187 (406)
T PRK09295 110 VRAGDNIIISEMEHHANIVPWQMLCAR-VGAELRVIPLNPDGTLQLETLPALF-DERTRLLAITHVSNVLGTENPLAEMI 187 (406)
T ss_pred CCCcCEEEECcchhhHHHHHHHHHHHH-cCcEEEEEecCCCCCCCHHHHHHhc-CCCcEEEEEecchhcccccCCHHHHH
Confidence 578999999999999876666444444 68888888653 789999999 77899999999999999999999999
Q ss_pred HHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhh-----------
Q 013210 210 RLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA----------- 276 (447)
Q Consensus 210 ~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~----------- 276 (447)
++|+++|+++++|++| +...++...+++|+++.|+||++|++| + |+++.++++++.+.....+.
T Consensus 188 ~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G--~-G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 264 (406)
T PRK09295 188 ALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTG--I-GILYVKEALLQEMPPWEGGGSMIATVSLTEG 264 (406)
T ss_pred HHHHHcCCEEEEEcccccCccccCchhcCCCEEEeehhhccCCCC--c-EEEEEchHhHhhCCCcccCCceeeeeecCCc
Confidence 9999999999999999 334455556789999999999999777 4 89998888766553211100
Q ss_pred -------hhhcCCCccHHHHH---HHHccCC--cHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhc
Q 013210 277 -------LMLLGPTMNPKVAF---ELSERIP--HLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMAN 343 (447)
Q Consensus 277 -------~~~~g~~~~~~~a~---~~~~~~~--~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~ 343 (447)
.....++++..... .++..+. .+....++..++++++.+.|++++ .++..|.
T Consensus 265 ~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~--------------- 329 (406)
T PRK09295 265 TTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQ--------------- 329 (406)
T ss_pred cccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC---------------
Confidence 00111122222111 1221111 233444566788888999988774 4665442
Q ss_pred cCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCC
Q 013210 344 KEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLG 423 (447)
Q Consensus 344 ~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~ 423 (447)
..+++++|.+++.. ...+...|.. +| +.++.|..|.. .....+|. ++.||+|++ ..
T Consensus 330 ---~~~~iv~~~~~~~~-~~~~~~~L~~---~g-I~v~~g~~c~~--------------~~~~~~~~-~~~iRiS~~-~y 385 (406)
T PRK09295 330 ---NRLGVIAFNLGKHH-AYDVGSFLDN---YG-IAVRTGHHCAM--------------PLMAYYNV-PAMCRASLA-MY 385 (406)
T ss_pred ---CCceEEEEEECCcC-HHHHHHHHHh---CC-eEEeccccchH--------------HHHHHHCC-CCEEEEEcc-CC
Confidence 12459999987532 3455566654 34 67787844321 12334454 368999999 99
Q ss_pred CHHHHHHHHHHHHHHhhh
Q 013210 424 TLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 424 ~~~~~i~~l~~al~~~~~ 441 (447)
+++++|+.|.++|+++..
T Consensus 386 nt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 386 NTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 999999999999988753
No 54
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=3.3e-32 Score=269.53 Aligned_cols=330 Identities=18% Similarity=0.206 Sum_probs=241.0
Q ss_pred cccccccCCH-HHHHHhhcCCCCCCCC-CccccCCCCchHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHh----c
Q 013210 64 ASATFTVMEP-ETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQL----C 135 (447)
Q Consensus 64 ~att~~~~~~-~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l----~ 135 (447)
+++++..+++ +++.+.+...++||.+ .|.+++.....++++++.+++++|++ .++||+|+|+|++.++.++ .
T Consensus 6 a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~ 85 (364)
T PLN02651 6 QATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYK 85 (364)
T ss_pred cCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcc
Confidence 4556665565 7777777777888876 67777766777899999999999975 5999999999999888665 3
Q ss_pred CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHH
Q 013210 136 SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSR 210 (447)
Q Consensus 136 ~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~ 210 (447)
++||+|+++..+|+++...+... .+ .|++++.++.+ |++++++++ ++++++|++++++|+||.++|+++|.+
T Consensus 86 ~~g~~vl~~~~~h~s~~~~~~~~-~~-~g~~v~~v~~~~~~~~d~~~l~~~i-~~~t~lv~v~~~~n~tG~~~~l~~I~~ 162 (364)
T PLN02651 86 DKKKHVITTQTEHKCVLDSCRHL-QQ-EGFEVTYLPVKSDGLVDLDELAAAI-RPDTALVSVMAVNNEIGVIQPVEEIGE 162 (364)
T ss_pred CCCCEEEEcccccHHHHHHHHHH-Hh-cCCEEEEEccCCCCcCCHHHHHHhc-CCCcEEEEEECCCCCceecccHHHHHH
Confidence 67899999999999987777433 33 68888888763 799999999 788999999999999999999999999
Q ss_pred HHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhh----hhhcCCCc
Q 013210 211 LAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA----LMLLGPTM 284 (447)
Q Consensus 211 la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~----~~~~g~~~ 284 (447)
+||++|+++++|++| +.+++++.++++|+++.|.||++|++| + |+++.+++....+.....+. ....|+.
T Consensus 163 ~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~~gp~G--~-g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~- 238 (364)
T PLN02651 163 LCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKIYGPKG--V-GALYVRRRPRVRLEPLMSGGGQERGRRSGTE- 238 (364)
T ss_pred HHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechhhhCCCCc--e-EEEEEcCCCCCCCCccccCCCccCCccCCCc-
Confidence 999999999999999 446778888899999999999977666 4 77777665544333221110 1122322
Q ss_pred cHHHHHHHHccCC----cHHHHHHHHHHHHHHHHHHHHh-C-CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013210 285 NPKVAFELSERIP----HLGLRMKEHCHRALIFARRMKK-L-GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 358 (447)
Q Consensus 285 ~~~~a~~~~~~~~----~l~~~~~~~~~~~~~l~~~L~~-~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 358 (447)
+......+...++ ......++..++++++.+.|++ . +.++..|.-+.. ...++++|.+++
T Consensus 239 ~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~--------------~~~~i~~~~~~~ 304 (364)
T PLN02651 239 NTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEK--------------RYPGTLNLSFAY 304 (364)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCccc--------------CcCCEEEEEeCC
Confidence 2211111111221 2233445677888888888875 3 447766531110 124499999985
Q ss_pred HHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCC----CeEEEEeCCCCCHHHHHH
Q 013210 359 EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISA----GLVRMSVGYLGTLDQRWS 430 (447)
Q Consensus 359 ~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~----~~iRiS~g~~~~~~~~i~ 430 (447)
.. .+.+...|.. |+++.| ++|......+++.++++|.++ +.||+|++ ..+++++|+
T Consensus 305 ~~-~~~~~~~L~~------i~v~~g--------~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~-~~~t~~did 364 (364)
T PLN02651 305 VE-GESLLMGLKE------VAVSSG--------SACTSASLEPSYVLRALGVPEEMAHGSLRLGVG-RFTTEEEVD 364 (364)
T ss_pred CC-HHHHHHHhCC------EEEEch--------hhcCCCCCCcCHHHHHcCCChHHhCceEEEEcC-CCCCHHHcC
Confidence 43 4577777764 688989 556655556778888898764 79999999 999888764
No 55
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=1.5e-31 Score=268.39 Aligned_cols=331 Identities=17% Similarity=0.198 Sum_probs=235.9
Q ss_pred ccccccCCH-HHHHHhhcCCCCCCC-CCccccCCCCchHHHHHHHHHHHhCC-C--eEEEeCChHHHHHHHHHHh----c
Q 013210 65 SATFTVMEP-ETMRRMFAGELGPDR-DFFIYSRHFNPTVLNLSRQMAALEGT-E--AAYCTASGMSAISSVLMQL----C 135 (447)
Q Consensus 65 att~~~~~~-~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~l~~~ia~l~g~-~--~~~~tsggt~A~~~al~~l----~ 135 (447)
++++..+.+ +.+.++++..++|+. +.|..++......+++++.+|+++|+ + .++||+|+|+++++++.++ +
T Consensus 27 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~ 106 (401)
T PRK10874 27 ATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRL 106 (401)
T ss_pred cccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccC
Confidence 444443345 778788877777764 35656666667789999999999998 3 4999999999999999887 3
Q ss_pred CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHH
Q 013210 136 SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSR 210 (447)
Q Consensus 136 ~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~ 210 (447)
++||+|++++++|++....+.....+ .|++++.++.+ |++++++++ +++|++|++++++||||.++|+++|.+
T Consensus 107 ~~gd~vl~~~~~~~s~~~~~~~~~~~-~g~~v~~v~~~~~~~~d~~~l~~~i-~~~t~lv~i~~~~n~tG~~~~~~~i~~ 184 (401)
T PRK10874 107 QPGDEIIVSEAEHHANLVPWLMVAQQ-TGAKVVKLPLGADRLPDVDLLPELI-TPRTRILALGQMSNVTGGCPDLARAIT 184 (401)
T ss_pred CCcCEEEECCcchHHHHHHHHHHHHH-hCCEEEEEecCCCCcCCHHHHHHhc-CcCcEEEEEeCCcccccCcCCHHHHHH
Confidence 78999999999999876555444344 68888887753 789999999 889999999999999999999999999
Q ss_pred HHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhh------------
Q 013210 211 LAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA------------ 276 (447)
Q Consensus 211 la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~------------ 276 (447)
+|+++|+++|+|++| +.+..+...+++|+++.|+||.+|++| + |+++.++++++.+.....+.
T Consensus 185 l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G--~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (401)
T PRK10874 185 LAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLYGPTG--I-GVLYGKSELLEAMSPWQGGGKMLTEVSFDGFT 261 (401)
T ss_pred HHHHcCCEEEEECCcccccccCCchhcCCCEEEEecccccCCCc--c-EEEEEchHHHhcCCCeecCCcceEeeccCccC
Confidence 999999999999999 455566666789999999999999777 4 99999988877664321100
Q ss_pred -----h-hhcCCCc--cHHHHHHHHccCC--cHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCCchhHHHHHHhccC
Q 013210 277 -----L-MLLGPTM--NPKVAFELSERIP--HLGLRMKEHCHRALIFARRMKKL-GLKVLYPGLEDHPHHELLKSMANKE 345 (447)
Q Consensus 277 -----~-~~~g~~~--~~~~a~~~~~~~~--~l~~~~~~~~~~~~~l~~~L~~~-~~~v~~p~~~~~p~~~l~~~~~~~~ 345 (447)
. ...|+.. ...+...++..+. ......++..++++++.+.|+++ +.++..+.
T Consensus 262 ~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~----------------- 324 (401)
T PRK10874 262 PQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQ----------------- 324 (401)
T ss_pred CCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC-----------------
Confidence 0 0112111 1111112221111 12233455677788888888877 33444321
Q ss_pred CCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCH
Q 013210 346 YGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTL 425 (447)
Q Consensus 346 ~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~ 425 (447)
.+++++|.+++.. ...+.+.|... | +.++.|..++ ......+|. .+.||+|++ ..++
T Consensus 325 --~~~i~~~~~~~~~-~~~~~~~L~~~---g-I~v~~g~~~~--------------~~~~~~~g~-~~~iRiS~~-~~nt 381 (401)
T PRK10874 325 --DSSLLAFDFAGVH-HSDLVTLLAEY---G-IALRAGQHCA--------------QPLLAALGV-TGTLRASFA-PYNT 381 (401)
T ss_pred --CCcEEEEEECCcC-HHHHHHHHHHC---C-cEEeccccch--------------HHHHHHhCC-CCEEEEEec-ccCC
Confidence 2348888887533 35666666653 3 5777763321 123334454 378999999 9999
Q ss_pred HHHHHHHHHHHHHhh
Q 013210 426 DQRWSQFEKALSRMQ 440 (447)
Q Consensus 426 ~~~i~~l~~al~~~~ 440 (447)
+++++.|.++|+++-
T Consensus 382 ~edid~ll~al~~~~ 396 (401)
T PRK10874 382 QSDVDALVNAVDRAL 396 (401)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998764
No 56
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=3e-31 Score=265.98 Aligned_cols=332 Identities=16% Similarity=0.133 Sum_probs=233.8
Q ss_pred cccccccCCH-HHHHHhhcCCCCCCC-CCccccCCCCchHHHHHHHHHHHhCCC---eEEEeCChHHHHHHHHHHh----
Q 013210 64 ASATFTVMEP-ETMRRMFAGELGPDR-DFFIYSRHFNPTVLNLSRQMAALEGTE---AAYCTASGMSAISSVLMQL---- 134 (447)
Q Consensus 64 ~att~~~~~~-~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~l~~~ia~l~g~~---~~~~tsggt~A~~~al~~l---- 134 (447)
+++++..+.+ +.+.+.+....+|+. +.|..++.....++++|+.+|+++|++ .++||+|+|+++++++.++
T Consensus 23 a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~ 102 (398)
T TIGR03392 23 AATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPR 102 (398)
T ss_pred ccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhcc
Confidence 3444444445 777777766666764 345555555566789999999999973 4899999999999999887
Q ss_pred cCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHH
Q 013210 135 CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELS 209 (447)
Q Consensus 135 ~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~ 209 (447)
+++||+|++++++|++....+.....+ .|+++++++.+ |++++++++ +++|++|++++++||||.+.|+++|.
T Consensus 103 ~~~gd~Vl~~~~~~~s~~~~~~~~~~~-~g~~v~~v~~~~~~~~~~~~l~~~i-~~~t~lv~i~~~~n~tG~~~~~~~i~ 180 (398)
T TIGR03392 103 LQPGDEIIVSEAEHHANLIPWLMVAQQ-TGAKVVKLPIGADLLPDIRQLPELL-TPRTRILALGQMSNVTGGCPDLARAI 180 (398)
T ss_pred CCCCCEEEECCcchhHHHHHHHHHHHH-cCcEEEEEecCCCCCcCHHHHHHHh-ccCceEEEEECccccccccCCHHHHH
Confidence 478999999999999865544333334 68888888754 789999999 78899999999999999999999999
Q ss_pred HHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhh-----------
Q 013210 210 RLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA----------- 276 (447)
Q Consensus 210 ~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~----------- 276 (447)
++|+++|+++++|++| +.+..+...+++|++++|+||.+|++| + |+++.++++++.+.....+.
T Consensus 181 ~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~gp~G--~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (398)
T TIGR03392 181 TLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLYGPTG--I-GVLYGKTELLEAMPPWQGGGKMLSHVSFDGF 257 (398)
T ss_pred HHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecccccCCCc--e-EEEEEcHHHHhhCCCeecCCceEeecccccc
Confidence 9999999999999999 444455556689999999999999776 5 99999988877664321100
Q ss_pred ------hh-hcCCCcc-H-HHHHHHHccC--CcHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhcc
Q 013210 277 ------LM-LLGPTMN-P-KVAFELSERI--PHLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANK 344 (447)
Q Consensus 277 ------~~-~~g~~~~-~-~~a~~~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~ 344 (447)
.. ..|+... . .++..++..+ ..+....++..++++++.+.|++++ .++..+.
T Consensus 258 ~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~---------------- 321 (398)
T TIGR03392 258 IPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCP---------------- 321 (398)
T ss_pred ccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC----------------
Confidence 00 1122211 1 1111222211 1233444566778888888888764 3443221
Q ss_pred CCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCC
Q 013210 345 EYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGT 424 (447)
Q Consensus 345 ~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~ 424 (447)
.+++++|.+++.. .+.+.+.|... | |.++.|..|+ ......+|. ++.||+|++ ..+
T Consensus 322 ---~~~i~~~~~~~~~-~~~l~~~L~~~---g-I~v~~g~~~~--------------~~~~~~~g~-~~~iRvS~~-~~~ 377 (398)
T TIGR03392 322 ---GSSLLAFDFAGVH-HSDLAALLAES---G-IALRAGQHCA--------------QPLMAALGV-SGTLRASFA-PYN 377 (398)
T ss_pred ---CCcEEEEEeCCcC-HHHHHHHHHhC---C-EEEecCccch--------------HHHHHHhCC-CCEEEEEee-ccC
Confidence 2348988887543 35677777653 3 6777774332 122334454 378999999 899
Q ss_pred HHHHHHHHHHHHHHhh
Q 013210 425 LDQRWSQFEKALSRMQ 440 (447)
Q Consensus 425 ~~~~i~~l~~al~~~~ 440 (447)
++++++.+.++|+++.
T Consensus 378 t~~ei~~l~~~l~~~~ 393 (398)
T TIGR03392 378 TQQDVDALVDAVGAAL 393 (398)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 57
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=2.4e-31 Score=265.00 Aligned_cols=339 Identities=16% Similarity=0.163 Sum_probs=241.4
Q ss_pred cccccccCCH-HHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhc---CC
Q 013210 64 ASATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLC---SS 137 (447)
Q Consensus 64 ~att~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~---~~ 137 (447)
+++++..+++ +.+.+++...++||.+.+.++......++++++.+++++|++ .++||+|+|+++++++.++. .+
T Consensus 6 aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~ 85 (379)
T TIGR03402 6 NATTRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPE 85 (379)
T ss_pred cCCCCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCC
Confidence 4666666666 777777777778887766666656677899999999999975 49999999999999998764 45
Q ss_pred CCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHH
Q 013210 138 GGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLA 212 (447)
Q Consensus 138 gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la 212 (447)
|++|+++..+|+++...+... .+ .|.++++++.+ |++++++++ ++++++|++++++||||.+.|+++|.++|
T Consensus 86 ~~~vv~~~~~~~s~~~~~~~~-~~-~G~~v~~v~~~~~g~~~~~~l~~~i-~~~~~lv~i~~~~n~tG~~~~~~~I~~l~ 162 (379)
T TIGR03402 86 KRHIITTAVEHPAVLSLCQHL-EK-QGYKVTYLPVDEEGRLDLEELRAAI-TDDTALVSVMWANNETGTIFPIEEIGEIA 162 (379)
T ss_pred CCeEEEcccccHHHHHHHHHH-HH-cCCEEEEEccCCCCcCCHHHHHHhc-CCCcEEEEEEcccCCeeecccHHHHHHHH
Confidence 689999999999887766433 33 58888888753 789999999 78899999999999999999999999999
Q ss_pred HhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhh----hhhhcCCCc-c
Q 013210 213 HDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQG----ALMLLGPTM-N 285 (447)
Q Consensus 213 ~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~----~~~~~g~~~-~ 285 (447)
+++|+++|+|++| +..+++..++++|+++.|+||++|++| + |+++.+++.. +.....+ .....|+.. .
T Consensus 163 ~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G--~-g~l~v~~~~~--~~p~~~g~~~~~~~~~gt~~~~ 237 (379)
T TIGR03402 163 KERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLHGPKG--V-GALYIRKGTR--FRPLLRGGHQERGRRAGTENVP 237 (379)
T ss_pred HHcCCEEEEECcccccccccCcccCCCCEEEEcHHHcCCCCc--e-EEEEECCCCC--CCCcccCCccCCCcCCCCccHH
Confidence 9999999999999 445566677899999999999888777 4 7777665431 1111100 001222221 1
Q ss_pred HHHHH-HHHcc-CCcHHHHHHHHHHHHHHHHHHHHh-CCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHH
Q 013210 286 PKVAF-ELSER-IPHLGLRMKEHCHRALIFARRMKK-LGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEK 361 (447)
Q Consensus 286 ~~~a~-~~~~~-~~~l~~~~~~~~~~~~~l~~~L~~-~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~ 361 (447)
...+. .++.. .+.+....++..++++++.+.|++ ++. ++..+.... .+++++|.++..+
T Consensus 238 ~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~- 300 (379)
T TIGR03402 238 GIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKR----------------LPNTVNISFEYIE- 300 (379)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccC----------------CCCEEEEEecCCC-
Confidence 11111 11111 123444556677888888888875 544 444332111 2337777776433
Q ss_pred HHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCC----CCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013210 362 ANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGIS----AGLVRMSVGYLGTLDQRWSQFEKALS 437 (447)
Q Consensus 362 ~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~----~~~iRiS~g~~~~~~~~i~~l~~al~ 437 (447)
...+...|... | |.++.| +.|......+++.+.++|.. .+.||+|++ ..+++++|+.+.++|+
T Consensus 301 ~~~~~~~l~~~---g-I~v~~g--------~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~-~~~t~~di~~~~~~l~ 367 (379)
T TIGR03402 301 GEAILLLLDME---G-ICASSG--------SACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLS-RYNTEEDIDYVLEVLP 367 (379)
T ss_pred HHHHHHhhccC---C-EEEEch--------hhcCCCCCCcCHHHHHcCCChhhcCceEEEEcC-CCCCHHHHHHHHHHHH
Confidence 45677777653 4 688888 34444444456777888875 478999999 9999999999998887
Q ss_pred Hhh
Q 013210 438 RMQ 440 (447)
Q Consensus 438 ~~~ 440 (447)
++.
T Consensus 368 ~~~ 370 (379)
T TIGR03402 368 PII 370 (379)
T ss_pred HHH
Confidence 764
No 58
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=2.9e-31 Score=266.13 Aligned_cols=339 Identities=18% Similarity=0.163 Sum_probs=236.4
Q ss_pred cccccccCCH-HHHHHhhcCCCCCCCC-CccccCCCCchHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhc----
Q 013210 64 ASATFTVMEP-ETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLC---- 135 (447)
Q Consensus 64 ~att~~~~~~-~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~---- 135 (447)
++++++.+.+ +.+.+++...++||.+ .+.++......++++++.+++++|++ .++||+|+|+++++++.++.
T Consensus 10 aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~ 89 (402)
T TIGR02006 10 AATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYK 89 (402)
T ss_pred CcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhc
Confidence 4556665666 7777777666778764 45555555567889999999999975 59999999999999987753
Q ss_pred CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHH
Q 013210 136 SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSR 210 (447)
Q Consensus 136 ~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~ 210 (447)
++||+|+++.++|+++...+... .+ .|+++++++.+ |++++++++ ++++++|++++++||||.+.|+++|.+
T Consensus 90 ~~g~~Vi~~~~~h~s~~~~~~~~-~~-~g~~v~~v~~~~~~~~d~~~l~~~l-~~~~~lv~v~~~~n~tG~~~~~~~I~~ 166 (402)
T TIGR02006 90 SKGNHIITSKTEHKAVLDTCRYL-ER-EGFEVTYLPPKSNGLIDLEELKAAI-RDDTILVSIMHVNNEIGVIQDIAAIGE 166 (402)
T ss_pred CCCCEEEECCCccHHHHHHHHHH-Hh-cCCEEEEEccCCCCcCCHHHHHHhc-CCCCEEEEEECCCcCceecccHHHHHH
Confidence 57899999999999988776432 33 58888888754 899999999 778999999999999999999999999
Q ss_pred HHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhh----hhhcCCCc
Q 013210 211 LAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA----LMLLGPTM 284 (447)
Q Consensus 211 la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~----~~~~g~~~ 284 (447)
+|+++|+++|+|++| +..+++..+.++|+++.|+||++|++| + |+++.+++....+.....+. ....|+..
T Consensus 167 l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~gp~G--~-G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~ 243 (402)
T TIGR02006 167 ICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIYGPKG--I-GALYVRRKPRVRLEALIHGGGHERGMRSGTLP 243 (402)
T ss_pred HHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhcCCCc--e-EEEEEccCCCCCCCceecCCCccCCccCCCcc
Confidence 999999999999999 445566667799999999999998767 4 66665543322222111110 01122222
Q ss_pred c-HHHHH-HHHccC-CcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHH
Q 013210 285 N-PKVAF-ELSERI-PHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEE 360 (447)
Q Consensus 285 ~-~~~a~-~~~~~~-~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~ 360 (447)
. ...+. .+++.+ +.+..+.++..++++++.+.|++++. .+..+.....| .++.|.|....
T Consensus 244 ~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p----------------~~~~v~f~~~~ 307 (402)
T TIGR02006 244 THQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVP----------------GNLNVSFNYVE 307 (402)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCC----------------CeEEEEEeCcC
Confidence 1 11111 112111 23455566778888899999887653 44332211112 13334444221
Q ss_pred HHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCC----CCeEEEEeCCCCCHHHHHHHHHHHH
Q 013210 361 KANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGIS----AGLVRMSVGYLGTLDQRWSQFEKAL 436 (447)
Q Consensus 361 ~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~----~~~iRiS~g~~~~~~~~i~~l~~al 436 (447)
.+.+...|+. +.++.| +.|.+....++..+.++|++ .+.||+|+| ..+++++++.|.++|
T Consensus 308 -~~~~~~~l~~------i~v~~G--------~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~-~~~t~edid~l~~~l 371 (402)
T TIGR02006 308 -GESLIMALKD------LAVSSG--------SACTSASLEPSYVLRALGINDELAHSSIRFTIG-RFTTEEEIDYAVKLV 371 (402)
T ss_pred -HHHHHHhcCC------EEEech--------hhcCCCCCCccHHHHHcCCChhhcCceEEEEec-CCCCHHHHHHHHHHH
Confidence 2345555543 677888 44554455566777888886 478999999 999999999999888
Q ss_pred HHhh
Q 013210 437 SRMQ 440 (447)
Q Consensus 437 ~~~~ 440 (447)
+++.
T Consensus 372 ~~~~ 375 (402)
T TIGR02006 372 KSAI 375 (402)
T ss_pred HHHH
Confidence 7764
No 59
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-30 Score=258.05 Aligned_cols=272 Identities=23% Similarity=0.272 Sum_probs=207.3
Q ss_pred HHHHHHHHHHHh----C----CCe-EEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 101 VLNLSRQMAALE----G----TEA-AYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 101 ~~~l~~~ia~l~----g----~~~-~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
..+||+.||+.+ | .+. +++|+|+++|+..++++++.+||+|++++|.|+.+...+. ..|.++..++
T Consensus 67 ~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~-----~~gg~~v~v~ 141 (393)
T COG0436 67 IPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVK-----LAGGKPVPVP 141 (393)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHH-----hcCCEEEEEe
Confidence 356777777765 3 233 9999999999999999999999999999999999988773 3677877776
Q ss_pred C-----C---CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCcc------C
Q 013210 172 I-----S---DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSPA------R 234 (447)
Q Consensus 172 ~-----~---d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~~------~ 234 (447)
. + |+++|++++ +++||+|++++||||||.+.+ +++|+++|++||+++|+||+|..+.++.. +
T Consensus 142 l~~~~~~f~~d~~~l~~~i-~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~ 220 (393)
T COG0436 142 LDEEENGFKPDLEDLEAAI-TPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILE 220 (393)
T ss_pred CCcCccCCcCCHHHHHhhc-CccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhh
Confidence 3 2 799999999 779999999999999999986 77999999999999999999977766531 1
Q ss_pred C----CCeEEEeCCCccccCCCCeeEEEEEcC-hHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCC---cHHHHHHHH
Q 013210 235 L----GADVVVHSISKFISGGADIIAGAVCGP-ANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP---HLGLRMKEH 306 (447)
Q Consensus 235 ~----g~di~~~S~sK~~g~~g~~igG~l~~~-~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~---~l~~~~~~~ 306 (447)
+ ...+++.|+||.|+++|+|+ ||++++ +++++.+.+.++ ......+.+.+.+|..++...+ .+....+.+
T Consensus 221 ~~~~~~~~i~i~s~SK~~~mtGwRv-G~~v~~~~~l~~~~~~~~~-~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~ 298 (393)
T COG0436 221 LAGARDRTITINSFSKTYGMTGWRI-GWVVGPPEELIAALRKLKS-YLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEY 298 (393)
T ss_pred cCCCcceEEEEecccccccccccce-eEeecChHHHHHHHHHHHH-hcccCCCHHHHHHHHHHhcCccchHHHHHHHHHH
Confidence 1 34789999999999999999 999998 888888876666 3334556666777777776553 233444679
Q ss_pred HHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCc
Q 013210 307 CHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYY 385 (447)
Q Consensus 307 ~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~ 385 (447)
.++++.+.+.|.+.+ +.+..|. ..+.+++..++...+...|...|.. +.| ++|.-|..
T Consensus 299 ~~rrd~l~~~l~~~~g~~~~~~p------------------~Ga~Y~~~~i~~~~d~~~f~~~Ll~--~~g-V~v~PG~~ 357 (393)
T COG0436 299 RERRDLLVEALNEIGGLSVVKPP------------------EGAFYLFPKIPELLDSEEFAKKLLE--EAG-VAVVPGSG 357 (393)
T ss_pred HHHHHHHHHHHHhcCCeeeccCC------------------CeeEEEEeecCCCCCHHHHHHHHHH--hCC-EEEecccc
Confidence 999999999999886 5665521 2455777888743345677766654 233 45555522
Q ss_pred cccccccccccCCCCCHHHHHhcCC--CCCeEEEEeCCCCC
Q 013210 386 ETLMSCSGSSTSSELNAEEKALAGI--SAGLVRMSVGYLGT 424 (447)
Q Consensus 386 ~s~~~~~a~~~~~~~~~~~~~~~g~--~~~~iRiS~g~~~~ 424 (447)
.|. .++.||||++ ..+
T Consensus 358 ----------------------Fg~~~g~~~vRis~~-~~~ 375 (393)
T COG0436 358 ----------------------FGEPPGEGYVRLSLA-TSE 375 (393)
T ss_pred ----------------------cCCCCCCCeEEEEEe-cCH
Confidence 122 3589999999 543
No 60
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.98 E-value=3.8e-30 Score=259.93 Aligned_cols=338 Identities=16% Similarity=0.174 Sum_probs=235.8
Q ss_pred cccccCCH-HHHHHhhcCCCCCCCC-CccccCCCCchHHHHHHHHHHHhCC---CeEEEeCChHHHHHHHHHHh----cC
Q 013210 66 ATFTVMEP-ETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGT---EAAYCTASGMSAISSVLMQL----CS 136 (447)
Q Consensus 66 tt~~~~~~-~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~l~~~ia~l~g~---~~~~~tsggt~A~~~al~~l----~~ 136 (447)
+++..+.+ +.+.+.+....+|+.+ .|..+.......+++++.+|+++|+ +.++||+|+|++++.++.++ ++
T Consensus 41 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~ 120 (424)
T PLN02855 41 TSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLK 120 (424)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCC
Confidence 33333344 7777777666666644 3444444445678999999999997 35999999999999998763 57
Q ss_pred CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHH
Q 013210 137 SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRL 211 (447)
Q Consensus 137 ~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~l 211 (447)
+||+|+++.++|++....+.....+ .|.++++++.+ |++++++++ +++|++|++++++||||.++|+++|.++
T Consensus 121 ~gd~vl~~~~~~~s~~~~~~~~a~~-~g~~v~~v~~~~~~~~~~~~l~~~i-~~~t~lv~i~~~~n~tG~~~~~~~I~~l 198 (424)
T PLN02855 121 PGDEVILSVAEHHSNIVPWQLVAQK-TGAVLKFVGLTPDEVLDVEQLKELL-SEKTKLVATHHVSNVLGSILPVEDIVHW 198 (424)
T ss_pred CcCEEEECCCccHHHHHHHHHHHHH-cCCEEEEEecCCCCCcCHHHHHHHh-ccCceEEEEeCccccccccCCHHHHHHH
Confidence 8999999999999877666544444 68888888753 789999999 7799999999999999999999999999
Q ss_pred HHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhh-------------
Q 013210 212 AHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA------------- 276 (447)
Q Consensus 212 a~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~------------- 276 (447)
|+++|+++++|++| +...++..++++|+++.|+||++|++| + |+++.++++++.+.....+.
T Consensus 199 ~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G--~-G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~ 275 (424)
T PLN02855 199 AHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHKMCGPTG--I-GFLWGKSDLLESMPPFLGGGEMISDVFLDHSTY 275 (424)
T ss_pred HHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecccccCCCc--c-EEEEEchhhhhcCCCEecCCCceeeeecCcccc
Confidence 99999999999999 334456666789999999999888776 4 99998888876654321100
Q ss_pred ----hhhcCCCccHH--HHH-HHHccC--CcHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCC
Q 013210 277 ----LMLLGPTMNPK--VAF-ELSERI--PHLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEY 346 (447)
Q Consensus 277 ----~~~~g~~~~~~--~a~-~~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~ 346 (447)
.....++.... .+. .++..+ ..+....++..++++++.+.|++++ .++..|.. ..+.
T Consensus 276 ~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~-~~~~------------ 342 (424)
T PLN02855 276 APPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKP-SEGV------------ 342 (424)
T ss_pred CCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCc-cccc------------
Confidence 00111112211 111 112111 1234455667888888999988774 46665431 0010
Q ss_pred CcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHH
Q 013210 347 GFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLD 426 (447)
Q Consensus 347 g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~ 426 (447)
..+++++|.+++.. ...+.+.|... +| |.++.|..|.. .....+|+ ++.||+|++ ..+++
T Consensus 343 ~r~~~v~~~~~~~~-~~~v~~~L~~~--~g-I~v~~g~~c~~--------------~~~~~~g~-~~~iRiS~~-~ynt~ 402 (424)
T PLN02855 343 GRAALCAFNVEGIH-PTDLSTFLDQQ--HG-VAIRSGHHCAQ--------------PLHRYLGV-NASARASLY-FYNTK 402 (424)
T ss_pred CcccEEEEEECCcC-HHHHHHHhccc--CC-EEEechhhhhH--------------HHHHHhCC-CCeEEEEec-cCCCH
Confidence 13569999987533 45677777652 24 56777744321 11133454 378999999 99999
Q ss_pred HHHHHHHHHHHHhhh
Q 013210 427 QRWSQFEKALSRMQD 441 (447)
Q Consensus 427 ~~i~~l~~al~~~~~ 441 (447)
++++.|.++|+++..
T Consensus 403 ~di~~l~~~l~~~~~ 417 (424)
T PLN02855 403 EEVDAFIHALKDTIA 417 (424)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987653
No 61
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.97 E-value=9.2e-30 Score=255.65 Aligned_cols=334 Identities=16% Similarity=0.188 Sum_probs=235.3
Q ss_pred ccccCCH-HHHHHhhcCCCCCCCC-CccccCCCCchHHHHHHHHHHHhCCC---eEEEeCChHHHHHHHHHHh----cCC
Q 013210 67 TFTVMEP-ETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTE---AAYCTASGMSAISSVLMQL----CSS 137 (447)
Q Consensus 67 t~~~~~~-~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~l~~~ia~l~g~~---~~~~tsggt~A~~~al~~l----~~~ 137 (447)
+++.+.+ +.+.+.++..++||.+ .+.+++......+++++.+|+++|++ .+++|+|+++++++++.++ +++
T Consensus 28 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~ 107 (403)
T TIGR01979 28 SQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKA 107 (403)
T ss_pred cCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCC
Confidence 3433344 7777777777777764 45555555566789999999999975 5999999999999988875 578
Q ss_pred CCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHH
Q 013210 138 GGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLA 212 (447)
Q Consensus 138 gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la 212 (447)
||+|++++++|++....+...... .|.+++.++.+ |++++++++ +++|++|++++++|+||.+.|+++|.++|
T Consensus 108 g~~vl~~~~~~~s~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~~~l~~~i-~~~~~lv~~~~~~~~tG~~~~~~~i~~~~ 185 (403)
T TIGR01979 108 GDEIVISEMEHHANIVPWQLLAER-TGATLKFIPLDDDGTLDLDDLEKLL-TEKTKLVAITHVSNVLGTVNPVEEIAKLA 185 (403)
T ss_pred CCEEEECcchhhHHHHHHHHHHHh-cCcEEEEEecCCCCCCCHHHHHHHh-ccCCeEEEEEcccccccccCCHHHHHHHH
Confidence 999999999999877666444433 68888888754 789999999 78899999999999999999999999999
Q ss_pred HhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhh--------------
Q 013210 213 HDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA-------------- 276 (447)
Q Consensus 213 ~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~-------------- 276 (447)
+++|+++|+|++| +....+...+++|+++.|+||++|++| + |+++.++++++.+.....++
T Consensus 186 ~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G--~-g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 262 (403)
T TIGR01979 186 HQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMYGPTG--I-GVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYN 262 (403)
T ss_pred HHcCCEEEEEchhhcCccccCccccCCCEEEEecccccCCCC--c-eEEEEchHHHhcCCCeecCCCceeecccCccccC
Confidence 9999999999999 334455566789999999999998777 4 89988888776653221100
Q ss_pred ---hhhcCCCccHH--HH-HHHHccCC--cHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCC
Q 013210 277 ---LMLLGPTMNPK--VA-FELSERIP--HLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYG 347 (447)
Q Consensus 277 ---~~~~g~~~~~~--~a-~~~~~~~~--~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g 347 (447)
.....++++.. .+ ..++..+. .+....++..++++++.+.|++++ .++..|..+. .
T Consensus 263 ~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~---------------~ 327 (403)
T TIGR01979 263 EAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAE---------------D 327 (403)
T ss_pred CChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcc---------------c
Confidence 00111122221 11 11221111 234455677888888999888774 4666543110 1
Q ss_pred cCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHH
Q 013210 348 FGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQ 427 (447)
Q Consensus 348 ~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~ 427 (447)
.++++.|.+++.. ...+.+.|... | +.++.|..++. .....+|. ++.+|||+| ..++++
T Consensus 328 ~~~~v~~~~~~~~-~~~~~~~L~~~---g-I~v~~g~~~~~--------------~~~~~~~~-~~~iRiS~~-~~~t~~ 386 (403)
T TIGR01979 328 RGGIISFNVEGVH-PHDVGTILDEE---G-IAVRSGHHCAQ--------------PLMRRFGV-PATCRASFY-IYNTEE 386 (403)
T ss_pred cCceEEEEeCCcC-HHHHHHHHhhC---C-EEEcchhhhhH--------------HHHHHhCC-CCEEEEEec-cCCCHH
Confidence 3568999987532 45566677653 3 56676643221 12223343 478999999 989999
Q ss_pred HHHHHHHHHHHhhh
Q 013210 428 RWSQFEKALSRMQD 441 (447)
Q Consensus 428 ~i~~l~~al~~~~~ 441 (447)
+++.|.++|+++.+
T Consensus 387 di~~l~~~l~~~~~ 400 (403)
T TIGR01979 387 DIDALVEALKKVRK 400 (403)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999987654
No 62
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=1.7e-29 Score=251.08 Aligned_cols=330 Identities=18% Similarity=0.204 Sum_probs=234.6
Q ss_pred cccccccCCH-HHHHHhhcCCCCCCCC-CccccCCCCchHHHHHHHHHHHhCCC---eEEEeCChHHHHHHHHHHhcC--
Q 013210 64 ASATFTVMEP-ETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTE---AAYCTASGMSAISSVLMQLCS-- 136 (447)
Q Consensus 64 ~att~~~~~~-~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~l~~~ia~l~g~~---~~~~tsggt~A~~~al~~l~~-- 136 (447)
.+++++.+.+ +.+.+.+...++||.+ .|.++........++++.+++++|.+ .+++|+|+++|++.++.++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~ 85 (373)
T cd06453 6 AATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRAN 85 (373)
T ss_pred ccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcC
Confidence 3444554555 7787888777788754 55666555566788999999999976 699999999999999999877
Q ss_pred -CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHH
Q 013210 137 -SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSR 210 (447)
Q Consensus 137 -~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~ 210 (447)
+|++|+++.++|++....+...... .|.++++++.+ |++++++.+ ++++++|++++++||||.+.|+++|.+
T Consensus 86 ~~g~~vl~~~~~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~~~d~~~l~~~l-~~~~~~v~~~~~~~~tG~~~~~~~i~~ 163 (373)
T cd06453 86 KPGDEIVTSVMEHHSNIVPWQQLAER-TGAKLKVVPVDDDGQLDLEALEKLL-TERTKLVAVTHVSNVLGTINPVKEIGE 163 (373)
T ss_pred CCCCEEEECcchhHHHHHHHHHHHhh-cCcEEEEeecCCCCCcCHHHHHHHh-cCCceEEEEeCcccccCCcCCHHHHHH
Confidence 8999999999999876555444333 68888888765 899999999 678999999999999999999999999
Q ss_pred HHHhcCCEEEEeCCCC--CCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhh-----------
Q 013210 211 LAHDKGVTVVVDNTFS--PLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL----------- 277 (447)
Q Consensus 211 la~~~gi~livD~~~~--~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~----------- 277 (447)
+|+++|+++|+|++++ ....+...+++|++++|++|+++++| + |+++.++++++.+.....+..
T Consensus 164 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~g--~-g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 240 (373)
T cd06453 164 IAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGPTG--I-GVLYGKEELLEEMPPYGGGGEMIEEVSFEETT 240 (373)
T ss_pred HHHHcCCEEEEEhhhhcCceeeeccccCCCEEEeccccccCCCC--c-EEEEEchHHhhcCCCeecCCCccccccccccc
Confidence 9999999999999983 23344456689999999999999755 4 899888888876654321100
Q ss_pred ------hhcCCCccH---HHHHHHHccC--CcHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccC
Q 013210 278 ------MLLGPTMNP---KVAFELSERI--PHLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKE 345 (447)
Q Consensus 278 ------~~~g~~~~~---~~a~~~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~ 345 (447)
.....++.. .+...++..+ ..+..+.++..++++++.+.|++++ .++..+. .
T Consensus 241 ~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~--------------- 304 (373)
T cd06453 241 YADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDA-E--------------- 304 (373)
T ss_pred cCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCc-c---------------
Confidence 001112221 1111122211 2345566677888899999998875 3554221 0
Q ss_pred CCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCH
Q 013210 346 YGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTL 425 (447)
Q Consensus 346 ~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~ 425 (447)
..+++++|.+++. ...++.+.|... | +.++.|+.++. .....+|. .+.||+|+| ..++
T Consensus 305 -~~~~~~~~~~~~~-~~~~i~~~l~~~---g-i~i~~g~~~~~--------------~~~~~~~~-~~~iRis~~-~~~t 362 (373)
T cd06453 305 -DRAGVVSFNLEGI-HPHDVATILDQY---G-IAVRAGHHCAQ--------------PLMRRLGV-PGTVRASFG-LYNT 362 (373)
T ss_pred -ccCCeEEEEECCc-CHHHHHHHHHHC---C-EEeccCccchh--------------HHHHHhCC-CCeEEEEec-CCCC
Confidence 1345889988753 345677777653 3 45555533211 11222343 478999999 9999
Q ss_pred HHHHHHHHHHH
Q 013210 426 DQRWSQFEKAL 436 (447)
Q Consensus 426 ~~~i~~l~~al 436 (447)
+++++.|.++|
T Consensus 363 ~~di~~~~~~l 373 (373)
T cd06453 363 EEEIDALVEAL 373 (373)
T ss_pred HHHHHHHHhhC
Confidence 99999998764
No 63
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.1e-28 Score=247.39 Aligned_cols=244 Identities=14% Similarity=0.149 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHhC--------C-CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 101 VLNLSRQMAALEG--------T-EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 101 ~~~l~~~ia~l~g--------~-~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
...+++.||++++ . +.+++|+|+++|+.+++.+++++||.|+++.|+|+.+...+. ..|.++..++
T Consensus 71 ~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~-----~~G~~~~~v~ 145 (399)
T PRK07681 71 IQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQ-----MAGATSYYMP 145 (399)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHH-----hcCCEEEEEe
Confidence 4568888888763 2 469999999999999999999999999999999999887763 2688887776
Q ss_pred CC-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------cC-
Q 013210 172 IS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------AR- 234 (447)
Q Consensus 172 ~~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~~- 234 (447)
.+ |++++++++ .+++++|++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++. ..
T Consensus 146 ~~~~~~~~~d~~~l~~~~-~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~ 224 (399)
T PRK07681 146 LKKENDFLPDLELIPEEI-ADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSV 224 (399)
T ss_pred cCCCCCCcCCHHHHHHhc-cccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhC
Confidence 53 688898888 678999999999999999998 6788899999999999999996654321 11
Q ss_pred ---CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC-CcHHHHHHHHHHHH
Q 013210 235 ---LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKEHCHRA 310 (447)
Q Consensus 235 ---~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~~~~~~ 310 (447)
...++++.|+||.+|.+|.|+ ||+++++++++.+....... ....+.+.+.++...+... +++....+.+.+++
T Consensus 225 ~~~~~~~i~~~S~SK~~~~~GlRi-G~~i~~~~l~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 302 (399)
T PRK07681 225 PGAKEVGVEINSLSKSYSLAGSRI-GYMIGNEEIVRALTQFKSNT-DYGVFLPIQKAACAALRNGAAFCEKNRGIYQERR 302 (399)
T ss_pred CCCcccEEEEeecccccCCcccee-EEEecCHHHHHHHHHHHhhc-ccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 135789999999999999999 99999999998887665411 1222333444444444432 34555666778889
Q ss_pred HHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 311 LIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 311 ~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
+.+.+.|++++.++..|. .|.++|+.++.......+...+..
T Consensus 303 ~~l~~~L~~~g~~~~~p~-------------------~g~f~~~~l~~~~~~~~~~~~l~~ 344 (399)
T PRK07681 303 DTLVDGFRTFGWNVDKPA-------------------GSMFVWAEIPKGWTSLSFAYALMD 344 (399)
T ss_pred HHHHHHHHHCCCcccCCC-------------------eeeEEEEECCCCCCHHHHHHHHHH
Confidence 999999998765544332 466889998743234566666543
No 64
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.97 E-value=3.1e-29 Score=249.03 Aligned_cols=328 Identities=18% Similarity=0.206 Sum_probs=236.6
Q ss_pred cccccccCCH-HHHHHhhcCCCCCC-CCCccccCCCCchHHHHHHHHHHHhCCCe---EEEeCChHHHHHHHHHHh---c
Q 013210 64 ASATFTVMEP-ETMRRMFAGELGPD-RDFFIYSRHFNPTVLNLSRQMAALEGTEA---AYCTASGMSAISSVLMQL---C 135 (447)
Q Consensus 64 ~att~~~~~~-~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~l~~~ia~l~g~~~---~~~tsggt~A~~~al~~l---~ 135 (447)
++++++.+.+ +.+.+.+...++|| ++.+.+++.....++++++.+|+++|++. ++|++|+|++++.++.++ +
T Consensus 6 ~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~ 85 (371)
T PF00266_consen 6 AGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPL 85 (371)
T ss_dssp SSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHG
T ss_pred CCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccc
Confidence 4566665566 88888888888887 34555666667788999999999999865 899999999999999998 7
Q ss_pred CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHH
Q 013210 136 SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSR 210 (447)
Q Consensus 136 ~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~ 210 (447)
++|++|+++..+|++....+.....+ .|.++++++.+ |++++++++ ++++++|++.++.|.+|.+.|+++|.+
T Consensus 86 ~~g~~vl~~~~~~~s~~~~~~~~~~~-~g~~v~~i~~~~~~~~~~~~~~~~l-~~~~~lv~~~~~~~~tG~~~pi~~I~~ 163 (371)
T PF00266_consen 86 KPGDEVLVTSNEHPSNRYPWEEIAKR-KGAEVRVIPADPGGSLDLEDLEEAL-NPDTRLVSISHVENSTGVRNPIEEIAK 163 (371)
T ss_dssp TTTCEEEEEESSHHHHHHHHHHHHHH-TTEEEEEEEEGTTSSCSHHHHHHHH-HTTESEEEEESBETTTTBBSSHHHHHH
T ss_pred cccccccccccccccccccccccccc-chhhhccccccccchhhhhhhhhhh-ccccceEEeecccccccEEeeeceehh
Confidence 89999999999999999777655544 68888887653 899999999 799999999999999999999999999
Q ss_pred HHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhh------------
Q 013210 211 LAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA------------ 276 (447)
Q Consensus 211 la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~------------ 276 (447)
+||++|+++++|.++ +...++..++++|++++|.+|++|++| + |+++.+++.+++++....+.
T Consensus 164 ~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~Kl~gp~G--~-g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~ 240 (371)
T PF00266_consen 164 LAHEYGALLVVDAAQSAGCVPIDLDELGADFLVFSSHKLGGPPG--L-GFLYVRPEAIERLRPAKPGGGYLDFPSLQEYG 240 (371)
T ss_dssp HHHHTTSEEEEE-TTTTTTSS--TTTTTESEEEEESTSTTSSST--E-EEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHC
T ss_pred hhhccCCceeEechhccccccccccccccceeeecccccCCCCc--h-hhheehhhhhhccccccccccccccccchhcc
Confidence 999999999999998 556678888899999999999767666 4 99999998888774321110
Q ss_pred -----hhhcCCCccHHHHHH---HHccCC--cHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccC
Q 013210 277 -----LMLLGPTMNPKVAFE---LSERIP--HLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKE 345 (447)
Q Consensus 277 -----~~~~g~~~~~~~a~~---~~~~~~--~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~ 345 (447)
....+++++...... ++..+. .+....++..++.+++.+.|.+.+. .+..|... +
T Consensus 241 ~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~--~------------ 306 (371)
T PF00266_consen 241 LADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDE--P------------ 306 (371)
T ss_dssp HHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCG--G------------
T ss_pred cccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeeccc--c------------
Confidence 111222333322221 222111 1334456678888999999999877 55443211 1
Q ss_pred CCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCH
Q 013210 346 YGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTL 425 (447)
Q Consensus 346 ~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~ 425 (447)
..+++++|.+++.+ ...+...|...+ |.++.|..+.. +......+ .+.||+|++ ..++
T Consensus 307 -~~~~i~~~~~~~~~-~~~~~~~L~~~~----I~~~~G~~~~~------------~~~~~~~~---~~~iRvS~~-~~nt 364 (371)
T PF00266_consen 307 -RRPSIVSFNLPGSD-ADDVVKYLEERG----IAVSTGSACAG------------PSLDILGM---GGVIRVSLH-YYNT 364 (371)
T ss_dssp -BGTTEEEEEETTSS-HHHHHHHHHHHT----EEEEESTTTCH------------HHHHHHHT---TTEEEEE-G-TTSS
T ss_pred -cccceEEEeecCCC-HHHHHHHHhhcC----EEEeccCcccH------------HHHHHhCC---CCEEEEecc-CCCC
Confidence 35679999997543 456666666533 67777744331 11112222 289999999 9999
Q ss_pred HHHHHHH
Q 013210 426 DQRWSQF 432 (447)
Q Consensus 426 ~~~i~~l 432 (447)
+++|+.|
T Consensus 365 ~~dv~~l 371 (371)
T PF00266_consen 365 EEDVDRL 371 (371)
T ss_dssp HHHHHHH
T ss_pred HHHHhhC
Confidence 9999876
No 65
>PRK07179 hypothetical protein; Provisional
Probab=99.97 E-value=3.4e-28 Score=244.38 Aligned_cols=311 Identities=15% Similarity=0.170 Sum_probs=219.8
Q ss_pred HHHHHhhcCCCCCC--CCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhH
Q 013210 74 ETMRRMFAGELGPD--RDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGT 151 (447)
Q Consensus 74 ~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~ 151 (447)
+.+.+.+.....++ ++.|.. +.+...++++++|+++|.+.+++|+||++|+..+++++..+||+|+++.+.|.+.
T Consensus 75 ~a~~~~~~~~~~~~~~s~~~~~---~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~ 151 (407)
T PRK07179 75 KAQIAALQEEGDSLVMSAVFLH---DDSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSL 151 (407)
T ss_pred HHHHHHHHHhCCCCCccccccC---CchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHH
Confidence 55555555443333 233322 2346689999999999999999999999999999999999999999999999888
Q ss_pred HHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCC-
Q 013210 152 HALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVL- 230 (447)
Q Consensus 152 ~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~- 230 (447)
...+. ..|.++..++..|+++|++++++.++++|++++++||+|.++|+++|.++|+++|+++|+|++|+....
T Consensus 152 ~~~~~-----~~g~~~~~~~~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g 226 (407)
T PRK07179 152 WEGVR-----AAGAQAHPFRHNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHG 226 (407)
T ss_pred HHHHH-----HCCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcC
Confidence 76552 257777777778999999999333588999999999999999999999999999999999999942111
Q ss_pred -C------ccC--CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHH--HHH-HHHccCCc
Q 013210 231 -S------PAR--LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPK--VAF-ELSERIPH 298 (447)
Q Consensus 231 -~------~~~--~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~--~a~-~~~~~~~~ 298 (447)
. ... .++|+++.|+||++|++ + |++++++++++.+....... ..+++..+. ++. .++..+..
T Consensus 227 ~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~---~-G~l~~~~~~~~~~~~~~~~~--~~~~t~~~~~~aa~~aal~~~~~ 300 (407)
T PRK07179 227 PQGAGLVAELGLTSRVHFITASLAKAFAGR---A-GIITCPRELAEYVPFVSYPA--IFSSTLLPHEIAGLEATLEVIES 300 (407)
T ss_pred CCCCchHHhcCCCCCCCEEEeechHhhhcc---C-eEEEeCHHHHHHHHHhCcCe--eeCCCCCHHHHHHHHHHHHHHhc
Confidence 1 111 14689999999999853 4 99999988877765443211 122222222 221 22333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccc
Q 013210 299 LGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFM 378 (447)
Q Consensus 299 l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~ 378 (447)
...+.+++.++++++.+.|++++.++. +.+.++++.++.......+.+.|... |+
T Consensus 301 ~~~~~~~l~~~~~~l~~~L~~~g~~v~---------------------~~~~i~~l~~~~~~~~~~~~~~L~~~---GI- 355 (407)
T PRK07179 301 ADDRRARLHANARFLREGLSELGYNIR---------------------SESQIIALETGSERNTEVLRDALEER---NV- 355 (407)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCCC---------------------CCCCEEEEEeCCHHHHHHHHHHHHHC---Cc-
Confidence 345677889999999999988765433 12458899887544466777777653 32
Q ss_pred cccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhcCC
Q 013210 379 AVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDSGV 444 (447)
Q Consensus 379 ~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~~~ 444 (447)
.++ .++.|... ...+.||||++ ..++++.++.+.++|+++.+...
T Consensus 356 ~~~------~~~~p~~~--------------~~~~~lRis~~-~~~t~edi~~~~~~l~~~~~~~~ 400 (407)
T PRK07179 356 FGA------VFCAPATP--------------KNRNLIRLSLN-ADLTASDLDRVLEVCREARDEVD 400 (407)
T ss_pred eEe------eecCCCCC--------------CCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHhhC
Confidence 211 11112110 12478999999 88999999999999988766544
No 66
>PRK07324 transaminase; Validated
Probab=99.97 E-value=2.7e-28 Score=242.03 Aligned_cols=242 Identities=17% Similarity=0.175 Sum_probs=182.0
Q ss_pred HHHHHHHHHHhC---CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----
Q 013210 102 LNLSRQMAALEG---TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS----- 173 (447)
Q Consensus 102 ~~l~~~ia~l~g---~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~----- 173 (447)
.++|+.||++++ .+.+++|+|+++|+.+++.+++.+||+|+++.|.|..+...+. ..|.+++.++.+
T Consensus 65 ~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~-----~~g~~v~~v~~~~~~~~ 139 (373)
T PRK07324 65 PEFKEAVASLYQNVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPE-----SLGAEVDYWQLKEENGW 139 (373)
T ss_pred HHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHH-----HcCCEEEEEecccccCC
Confidence 579999999874 3569999999999999999999999999999999998876653 267788777652
Q ss_pred --CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----cC-CCCeEEEe
Q 013210 174 --DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-----AR-LGADVVVH 242 (447)
Q Consensus 174 --d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-----~~-~g~di~~~ 242 (447)
|++++++++ ++++++|++++|+||||.+.+ +++|+++|++||+++|+|++|..+.+.. .. .+..+++.
T Consensus 140 ~~d~~~l~~~~-~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~ 218 (373)
T PRK07324 140 LPDLDELRRLV-RPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTN 218 (373)
T ss_pred CCCHHHHHHhC-CCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEe
Confidence 788998888 778999999999999999998 8899999999999999999996654432 11 14568899
Q ss_pred CCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCc-HHHHHHHHHHHHHHHHHHHHhCC
Q 013210 243 SISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPH-LGLRMKEHCHRALIFARRMKKLG 321 (447)
Q Consensus 243 S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~-l~~~~~~~~~~~~~l~~~L~~~~ 321 (447)
|+||.+|.+|.|+ ||+++++++++.+...+... ....+.+.+..+..++...+. +....+.+.++++.+.+.|++++
T Consensus 219 s~SK~~~~~G~Ri-G~i~~~~~li~~~~~~~~~~-~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~ 296 (373)
T PRK07324 219 SMSKTYSLPGIRV-GWIAANEEVIDILRKYRDYT-MICAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEP 296 (373)
T ss_pred cchhhcCCcccee-EEEecCHHHHHHHHHHhCcE-EecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999 99999999999998876521 223344455555555443322 33344556778888888888764
Q ss_pred C-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhh
Q 013210 322 L-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQ 370 (447)
Q Consensus 322 ~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~ 370 (447)
. .+..|. .|.++++.++.......|.++|.
T Consensus 297 ~~~~~~p~-------------------gg~~~~i~~~~~~~~~~~~~~ll 327 (373)
T PRK07324 297 RVSYVKPK-------------------AVSTSFVKLDVDMPSEDFCLKLL 327 (373)
T ss_pred CceEECCC-------------------ceEEEEEEeCCCCCHHHHHHHHH
Confidence 3 444442 34456666653223456766653
No 67
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.97 E-value=2.8e-29 Score=247.73 Aligned_cols=320 Identities=17% Similarity=0.167 Sum_probs=228.2
Q ss_pred cccccccCCH-HHHHHhhcCCCCCCCC-CccccCCCCchHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhcC---
Q 013210 64 ASATFTVMEP-ETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLCS--- 136 (447)
Q Consensus 64 ~att~~~~~~-~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~~--- 136 (447)
++++++.+.+ +.+.+++...++||.+ .+.+++......+++++.+|+++|++ .++||+|+++|++.++.++..
T Consensus 5 a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~ 84 (353)
T TIGR03235 5 NATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGE 84 (353)
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcc
Confidence 4566665666 7777777666677765 45666655566789999999999974 599999999999999988753
Q ss_pred -CC-CeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHH
Q 013210 137 -SG-GHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELS 209 (447)
Q Consensus 137 -~g-d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~ 209 (447)
+| ++|+++..+|+++...+... .. .|++++.++.+ |+++|++++ ++++++|++++++||||.+.|+++|.
T Consensus 85 ~~g~~~vi~~~~~~~s~~~~~~~~-~~-~G~~v~~v~~~~~~~~d~~~l~~~l-~~~~~lv~~~~~~n~tG~~~~~~~I~ 161 (353)
T TIGR03235 85 QKGKKHIITSAIEHPAVLEPIRAL-ER-NGFTVTYLPVDESGRIDVDELADAI-RPDTLLVSIMHVNNETGSIQPIREIA 161 (353)
T ss_pred cCCCCeeeEcccccHHHHHHHHHH-Hh-cCCEEEEEccCCCCcCCHHHHHHhC-CCCCEEEEEEcccCCceeccCHHHHH
Confidence 55 78999999999887776433 33 58888888754 889999999 77899999999999999999999999
Q ss_pred HHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHH--HHHHhhh----hhhhcC
Q 013210 210 RLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNS--MMDLHQG----ALMLLG 281 (447)
Q Consensus 210 ~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~--l~~~~~~----~~~~~g 281 (447)
++|+++|+++|+|++| +...++....++|+++.|+||++|++| + |+++.+++.... +.....+ .....|
T Consensus 162 ~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g--~-g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (353)
T TIGR03235 162 EVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIYGPKG--I-GALVIRKRGKPKAPLKPIMFGGGQERGLRPG 238 (353)
T ss_pred HHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehhhcCCCCc--e-EEEEEccCcccccccCceeeCCCCcCccccC
Confidence 9999999999999997 555666667789999999999998776 4 787776654321 1111000 000122
Q ss_pred CC-ccHHHHHH-HHcc-CCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013210 282 PT-MNPKVAFE-LSER-IPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 358 (447)
Q Consensus 282 ~~-~~~~~a~~-~~~~-~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 358 (447)
+. .....+.. ++.. ......+.+++.++++++.+.|++.+.++..+.-.. ..++++|.+++
T Consensus 239 t~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~----------------~~~i~~~~~~~ 302 (353)
T TIGR03235 239 TLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAET----------------IPHILNFSIDG 302 (353)
T ss_pred CCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccc----------------cCCEEEEEeCC
Confidence 21 11111111 1111 123456677888999999999987666665432111 23488888875
Q ss_pred HHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCC----CeEEEEe
Q 013210 359 EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISA----GLVRMSV 419 (447)
Q Consensus 359 ~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~----~~iRiS~ 419 (447)
.+ .+.+...|.. + ++++.| ..|......+++.+.++|+++ +.||+|+
T Consensus 303 ~~-~~~v~~~L~~-~----i~v~~g--------~~~~~~~~~~~~~l~~~g~~~~~~~~~~r~s~ 353 (353)
T TIGR03235 303 VN-SEALIVNLRA-D----AAVSTG--------SACSSSKYEPSHVLQAMGLDTDRARGAIRFSW 353 (353)
T ss_pred cC-HHHHHHHHhC-C----eEEEch--------hhcCCCCCCCCHHHHHcCCCHHHhCccEEEeC
Confidence 43 4566677753 2 688888 445554555678999999975 8899996
No 68
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.97 E-value=4.8e-28 Score=241.77 Aligned_cols=288 Identities=15% Similarity=0.201 Sum_probs=204.6
Q ss_pred CchHHHHHHHHHHHhCC-----CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 98 NPTVLNLSRQMAALEGT-----EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~-----~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
.+.++.+++.+++..|. +.+++|+|+++++..++.+++.+||+|+++.|.|..+...+. ..|+++.+++.
T Consensus 68 ~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~-----~~g~~~~~v~~ 142 (389)
T PRK05957 68 PPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAIT-----MAGCQPILVPT 142 (389)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHH-----hcCCEEEEeec
Confidence 35567777888877774 358999999999999999989999999999999988765542 26888888765
Q ss_pred C-----CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------c----C
Q 013210 173 S-----DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------A----R 234 (447)
Q Consensus 173 ~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~----~ 234 (447)
+ |++++++++ ++++++|++.+|+||||.+++ +++|+++|+++|+++++|++|..+.++. . .
T Consensus 143 ~~~~~~d~~~l~~~i-~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~ 221 (389)
T PRK05957 143 DDNYQLQPEAIEQAI-TPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGS 221 (389)
T ss_pred CCCCCcCHHHHHHhc-CcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCc
Confidence 4 789999999 778999999999999999997 8889999999999999999996554321 1 1
Q ss_pred CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHcc-CCcHHHHHHHHHHHHHHH
Q 013210 235 LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-IPHLGLRMKEHCHRALIF 313 (447)
Q Consensus 235 ~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~~~l~~~~~~~~~~~~~l 313 (447)
....+++.|+||.+|.+|.|+ ||++.++++++.+....... ....+...+..+...+.. ...+.+..+++.++++.+
T Consensus 222 ~~~~i~~~S~SK~~g~~GlRi-G~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l 299 (389)
T PRK05957 222 GNHTISLYSLSKAYGFASWRI-GYMVIPIHLLEAIKKIQDTI-LICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQIL 299 (389)
T ss_pred cCcEEEEecchhhccCcccee-EEEecCHHHHHHHHHHHhhc-ccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 135699999999999999999 99999999999888765411 112223344444444433 234555667788999999
Q ss_pred HHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccc
Q 013210 314 ARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSC 391 (447)
Q Consensus 314 ~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~ 391 (447)
.+.|++++. .+..| ..|.++|+.++...+...+.+.|.. +.| +.+..|..+
T Consensus 300 ~~~L~~~~~~~~~~~~-------------------~gg~~~~~~~~~~~~~~~~~~~l~~--~~g-v~v~pg~~f----- 352 (389)
T PRK05957 300 LKSLGQLQDRCTLHPA-------------------NGAFYCFLKVNTDLNDFELVKQLIR--EYR-VAVIPGTTF----- 352 (389)
T ss_pred HHHHHhcCCCccccCC-------------------CeeEEEEEeCCCCCChHHHHHHHHH--HCC-EEEccchhh-----
Confidence 999987643 22211 2456888888743335567777642 123 455555221
Q ss_pred cccccCCCCCHHHHHhcCC-CCCeEEEEeCCCCCHHHH---HHHHHHHHHH
Q 013210 392 SGSSTSSELNAEEKALAGI-SAGLVRMSVGYLGTLDQR---WSQFEKALSR 438 (447)
Q Consensus 392 ~a~~~~~~~~~~~~~~~g~-~~~~iRiS~g~~~~~~~~---i~~l~~al~~ 438 (447)
+. .++++|||+| ..+.+++ ++.|.+.+++
T Consensus 353 -----------------~~~~~~~iRis~~-~~~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 353 -----------------GMKNGCYLRIAYG-ALQKATAKEGIERLVQGLKT 385 (389)
T ss_pred -----------------CCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHHh
Confidence 11 1468999999 6555443 4444444433
No 69
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2.5e-28 Score=244.64 Aligned_cols=284 Identities=17% Similarity=0.184 Sum_probs=204.7
Q ss_pred hHHHHHHHHHHHh----C-----CC-eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEE
Q 013210 100 TVLNLSRQMAALE----G-----TE-AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTF 169 (447)
Q Consensus 100 ~~~~l~~~ia~l~----g-----~~-~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~ 169 (447)
....+++.+|+++ | .+ .+++|+|+++++..++.+++++||.|+++.|.|+.+...+. ..|.++..
T Consensus 82 G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~-----~~g~~v~~ 156 (410)
T PRK06290 82 GIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTK-----YYGGEVYN 156 (410)
T ss_pred CcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHH-----HcCCEEEE
Confidence 3467888888874 3 23 59999999999999999999999999999999999877763 25777777
Q ss_pred eCCC-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC-----ccC
Q 013210 170 VDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS-----PAR 234 (447)
Q Consensus 170 v~~~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~-----~~~ 234 (447)
++.+ |++++++.+ .+++++|++++||||||.+.+ +++|.++|++||++||+||+|..+.++ ...
T Consensus 157 v~~~~~~~~~~d~~~l~~~~-~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~ 235 (410)
T PRK06290 157 LPLLEENNFLPDLDSIPKDI-KEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLS 235 (410)
T ss_pred EecCCCcCCcCCHHHHHHhh-cccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhc
Confidence 7653 788888888 678999999999999999998 578888899999999999999655332 111
Q ss_pred ----CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCC-CccHHHHHHHHccCCcHHHHHHHHHHH
Q 013210 235 ----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGP-TMNPKVAFELSERIPHLGLRMKEHCHR 309 (447)
Q Consensus 235 ----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~-~~~~~~a~~~~~~~~~l~~~~~~~~~~ 309 (447)
.+.++++.|+||.+|.+|.|+ ||+++++++++.+....... ..+. .+.+.++..++...+.+....+++.++
T Consensus 236 ~~~~~~~~I~i~SfSK~~g~~GlRi-G~ii~~~~l~~~l~~~~~~~--~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~ 312 (410)
T PRK06290 236 VPGAKEVGVEIHSLSKAYNMTGWRL-AFVVGNELIVKAFATVKDNN--DSGQFIAIQKAGIYALDHPEITEKIREKYSRR 312 (410)
T ss_pred CCCccccEEEEeechhhcCCchhhe-EeEEeCHHHHHHHHHHHhcc--ccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHH
Confidence 246799999999999999999 99999999998887665421 1222 234444444554434455566778899
Q ss_pred HHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-------HHHHHHHHHhhcccccccccccc
Q 013210 310 ALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-------EKANRLMNYLQNYAQFGFMAVSL 382 (447)
Q Consensus 310 ~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-------~~~~~l~~~l~~~~~~g~~~vs~ 382 (447)
++.+.+.|++.+..+..|. .|.++|+.++.. .+...+.+.|...+ + +.+-
T Consensus 313 ~~~l~~~L~~~g~~~~~p~-------------------g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~--~-v~~~- 369 (410)
T PRK06290 313 LDKLVKILNEVGFKAEMPG-------------------GTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEK--L-ISTV- 369 (410)
T ss_pred HHHHHHHHHhCCCeecCCC-------------------eeeEEEEECCCccccCCCCCCHHHHHHHHHHhC--C-EEEE-
Confidence 9999999998876544332 345778888632 13567777776522 1 2211
Q ss_pred cCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCC----CCCHHHHHHHHHHHHHHh
Q 013210 383 GYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGY----LGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 383 G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~----~~~~~~~i~~l~~al~~~ 439 (447)
|... ..+++||+++. .++.+++++.|.++|..+
T Consensus 370 ---------p~~~---------------~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 370 ---------PWDD---------------AGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred ---------CCcc---------------ccCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 1110 12689999982 355555666666666544
No 70
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.97 E-value=4.3e-28 Score=243.15 Aligned_cols=242 Identities=19% Similarity=0.213 Sum_probs=177.8
Q ss_pred HHHHHHHHHHhCC-----CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC---
Q 013210 102 LNLSRQMAALEGT-----EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 102 ~~l~~~ia~l~g~-----~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 173 (447)
+.+.+.+++..|. +.+++|+|+++++.+++.+++.+||+|++..|+|+.+...+. ..|.++..++.+
T Consensus 85 ~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~-----~~g~~v~~v~~~~~~ 159 (405)
T PRK06207 85 ELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVE-----FFEGEMVPVQLDYLS 159 (405)
T ss_pred HHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHH-----HcCCEEEEEeccccC
Confidence 3444444544463 569999999999999999999999999999999999887763 256666655432
Q ss_pred -------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC------cc----
Q 013210 174 -------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS------PA---- 233 (447)
Q Consensus 174 -------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~------~~---- 233 (447)
|+++|++++ ++++++|++++|+||||.+.+ +++|+++|++||+++|+||+|..+.++ ..
T Consensus 160 ~~~~~~~d~~~l~~~~-~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ 238 (405)
T PRK06207 160 ADKRAGLDLDQLEEAF-KAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPI 238 (405)
T ss_pred cccCCCcCHHHHHHhh-hhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCC
Confidence 789999988 678999999999999999997 678889999999999999999765432 11
Q ss_pred CCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC-CcHHHHHHHHHHHHHH
Q 013210 234 RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKEHCHRALI 312 (447)
Q Consensus 234 ~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~~~~~~~~ 312 (447)
..+..+++.|+||.++.+|.|+ ||+++++++++.+...+... ....+.+.+.++..++... .++..+++++.++++.
T Consensus 239 ~~~~vi~i~SfSK~~~lpGlRi-G~ii~~~~l~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~ 316 (405)
T PRK06207 239 DPENVITIMGPSKTESLSGYRL-GVAFGSPAIIDRMEKLQAIV-SLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDD 316 (405)
T ss_pred CcCcEEEEecchhhccCcccce-EEEEcCHHHHHHHHHHHhHh-ccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 1245699999999999999999 99999999999887765521 1112223344444444322 3456677778888888
Q ss_pred HHHHHHhC-CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-HHHHHHHHHhh
Q 013210 313 FARRMKKL-GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-EKANRLMNYLQ 370 (447)
Q Consensus 313 l~~~L~~~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-~~~~~l~~~l~ 370 (447)
+.+.|+++ +..+..|. .|.++|+.++.. .+...+.+.|.
T Consensus 317 l~~~L~~~~~~~~~~p~-------------------gg~fl~~~l~~~~~~~~~~~~~l~ 357 (405)
T PRK06207 317 LLRVLRGVEGVFVRAPQ-------------------AGSYLFPRLPRLAVSLHDFVKILR 357 (405)
T ss_pred HHHHHhcCCCceecCCC-------------------eeEEEEEeCcccCCCHHHHHHHHH
Confidence 99999876 33433232 466899998741 23456777764
No 71
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.97 E-value=4.9e-28 Score=241.37 Aligned_cols=258 Identities=17% Similarity=0.199 Sum_probs=194.4
Q ss_pred ccccccccccCCHHHHHHhhcCCCCCCCC-CccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCC
Q 013210 61 SIEASATFTVMEPETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGG 139 (447)
Q Consensus 61 pi~~att~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd 139 (447)
||.+-........+++.+++. .++||++ .|.+++...+.++++|+.+|+++|++++++|+|+++|+.+++.+++++||
T Consensus 25 ~~~~~~p~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~~~gd 103 (387)
T PRK09331 25 PIQRGGILTPEARKALIEYGD-GYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLCKKGD 103 (387)
T ss_pred hhhcCCCCCHHHHHHHHHHHh-ccCCCcccccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcCCCC
Confidence 444443333223488888774 4578777 78888888899999999999999999999999999999999999999999
Q ss_pred eEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC-------CCHHHHHHhhcc------CCceEEEEEcCCCCCccccCHH
Q 013210 140 HVVAARTLYGGTHALLTHFFPRACNITTTFVDI-------SDHEMVNSAIVQ------GRTKVLYFESISNPTLAVANIP 206 (447)
Q Consensus 140 ~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~i~~------~~t~lV~i~~~~NptG~v~~l~ 206 (447)
+|+++.++|.+....+. ..|+++.+++. .|++++++++++ +++++|++++|+|++|.+.|++
T Consensus 104 ~Vlv~~~~h~s~~~~~~-----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~ 178 (387)
T PRK09331 104 YVVLDGLAHYTSYVAAE-----RAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAK 178 (387)
T ss_pred EEEECCCchHHHHHHHH-----HcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHH
Confidence 99999999988876542 26888888876 279999998842 3789999999999999999999
Q ss_pred HHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhh----hhc
Q 013210 207 ELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL----MLL 280 (447)
Q Consensus 207 ~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~----~~~ 280 (447)
+|.++|+++|+++|+|++| +.++++...+++|+++.|+||++++++ ++ |++++++++++.+........ ...
T Consensus 179 ~I~~la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~-~~-G~l~~~~~~i~~~~~~~~~~~~~~~~~~ 256 (387)
T PRK09331 179 KVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASA-PS-GVLATTEEYADKVFRTSRKFGVKEVELL 256 (387)
T ss_pred HHHHHHHHcCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCC-CE-EEEEECHHHHhhcccccCCCcccceeee
Confidence 9999999999999999999 334566667799999999999998654 45 899999988887654322110 012
Q ss_pred CCCcc--HHHH-HHHHccCCcHHHHHHHHHHHHHHHHHHHHhC-CCeeeC
Q 013210 281 GPTMN--PKVA-FELSERIPHLGLRMKEHCHRALIFARRMKKL-GLKVLY 326 (447)
Q Consensus 281 g~~~~--~~~a-~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~v~~ 326 (447)
+.+.. +..+ ...+..+.....+.+++.++++++.+.|+++ ++++..
T Consensus 257 ~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~~~~ 306 (387)
T PRK09331 257 GCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIEGFKQLG 306 (387)
T ss_pred ceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec
Confidence 22222 2221 1122122222234566677888999999998 666653
No 72
>PRK12414 putative aminotransferase; Provisional
Probab=99.97 E-value=7.2e-28 Score=240.09 Aligned_cols=219 Identities=18% Similarity=0.219 Sum_probs=166.8
Q ss_pred chHHHHHHHHHHHhCC-----CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC
Q 013210 99 PTVLNLSRQMAALEGT-----EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 173 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~-----~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~ 173 (447)
...+.+++.++++.|. +++++|+|+++|+..++++++.+||+|+++.|+|..+...+. ..|.++..++.+
T Consensus 70 ~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~~~~v~~~ 144 (384)
T PRK12414 70 ALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVR-----LQGATPVAIKLS 144 (384)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHH-----HcCCEEEEEecC
Confidence 3345555555566675 359999999999999999999999999999999998877663 246666666543
Q ss_pred ------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------cC----
Q 013210 174 ------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------AR---- 234 (447)
Q Consensus 174 ------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~~---- 234 (447)
|+++|++++ ++++++|++++|+||||.+.+ +++|+++|++||+++|+|++|..+.++. ..
T Consensus 145 ~~~~~~d~~~l~~~l-~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~ 223 (384)
T PRK12414 145 PEDFRVNWDEVAAAI-TPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHREL 223 (384)
T ss_pred ccccccCHHHHHhhc-CcccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCc
Confidence 789999988 678999999999999999974 7788999999999999999996654321 11
Q ss_pred CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHH
Q 013210 235 LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFA 314 (447)
Q Consensus 235 ~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~ 314 (447)
.+..+++.|+||.+|.+|.|+ ||+++++++++.+....... ....+.+.+.++...+..........+.++++++.+.
T Consensus 224 ~~~~i~~~SfSK~~~~pGlRi-G~~v~~~~l~~~l~~~~~~~-~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~ 301 (384)
T PRK12414 224 AERSVIVSSFGKSYHVTGWRV-GYCLAPAELMDEIRKVHQFM-VFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLA 301 (384)
T ss_pred cCcEEEEecccccccCccceE-EEEecCHHHHHHHHHHHhhe-ecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 135799999999999999999 99999999998887765421 1334445555555555443334445566789999999
Q ss_pred HHHHhCCCeee
Q 013210 315 RRMKKLGLKVL 325 (447)
Q Consensus 315 ~~L~~~~~~v~ 325 (447)
+.|++++..+.
T Consensus 302 ~~L~~~g~~~~ 312 (384)
T PRK12414 302 RELAGSRFELL 312 (384)
T ss_pred HHHHhCCCeec
Confidence 99998765543
No 73
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=3e-28 Score=242.23 Aligned_cols=282 Identities=15% Similarity=0.146 Sum_probs=205.6
Q ss_pred CCchHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-
Q 013210 97 FNPTVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS- 173 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~- 173 (447)
..+...++++.||+++|.+ .+++|+|+++++.+++.+++++||+|+++.|.|+.+...+. ..|.++..++.+
T Consensus 84 p~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~-----~~g~~~~~v~~~~ 158 (380)
T PLN03026 84 PDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAA-----VNGAEVIKVPRTP 158 (380)
T ss_pred CCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHH-----HcCCEEEEeecCC
Confidence 3444678999999999864 59999999999999999999999999999999987765552 257787777653
Q ss_pred ----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCc------cCCCCeEEEeC
Q 013210 174 ----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSP------ARLGADVVVHS 243 (447)
Q Consensus 174 ----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~------~~~g~di~~~S 243 (447)
|+++|+++++++++++|++++||||||.+.+.+++.++++.. +++|+||+|..+.... ...+..+++.|
T Consensus 159 ~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~S 237 (380)
T PLN03026 159 DFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRT 237 (380)
T ss_pred CCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEec
Confidence 788998887456899999999999999999999999999865 8999999996554321 12357899999
Q ss_pred CCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCe
Q 013210 244 ISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLK 323 (447)
Q Consensus 244 ~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~ 323 (447)
|||.+|.+|.|+ ||+++++++++.+...+.. ...+.+.+.++..++...+++....+++.++++++.+.|++++..
T Consensus 238 fSK~~glaGlRi-Gy~~~~~~~i~~l~~~~~~---~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 313 (380)
T PLN03026 238 FSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQP---YNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFL 313 (380)
T ss_pred chHhhcCccccc-eeeecCHHHHHHHHHhcCC---CCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 999999999999 9999999999888776542 222333444444444433445556667888899999999987642
Q ss_pred eeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHH
Q 013210 324 VLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAE 403 (447)
Q Consensus 324 v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~ 403 (447)
...|. .|.++++.++.......+.+.|... | +.+..+..
T Consensus 314 ~~~p~-------------------~~~f~~~~~~~~~~~~~~~~~l~~~---g-I~v~~~~~------------------ 352 (380)
T PLN03026 314 EPYPS-------------------DANFILCRVTSGRDAKKLKEDLAKM---G-VMVRHYNS------------------ 352 (380)
T ss_pred eECCC-------------------CCeEEEEECCCCCCHHHHHHHHHHC---C-eEEEECCC------------------
Confidence 22332 4568899887322345677776642 3 34433310
Q ss_pred HHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 404 EKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 404 ~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
.+ .++++|||+| . .+..+.|.++|++
T Consensus 353 ----~~-~~~~lRis~~-~---~~~~~~l~~al~~ 378 (380)
T PLN03026 353 ----KE-LKGYIRVSVG-K---PEHTDALMEALKQ 378 (380)
T ss_pred ----CC-CCCEEEEecC-C---HHHHHHHHHHHHH
Confidence 01 1468999999 3 2345566666654
No 74
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.97 E-value=7e-28 Score=238.89 Aligned_cols=292 Identities=15% Similarity=0.157 Sum_probs=196.1
Q ss_pred Cccc-cccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHh
Q 013210 56 GGVN-MSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQL 134 (447)
Q Consensus 56 ~~~~-~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l 134 (447)
|+++ .|++.+-+......+.+.++-.+.-+.+...........+...++++.+|+++|.+.+++++||++++..++.++
T Consensus 7 ~~~~~~~~~~~g~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l 86 (370)
T TIGR02539 7 GSINLNPLQRGGVLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHAL 86 (370)
T ss_pred cccccChhhhCCCCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHh
Confidence 4555 466666655543345555443322100000112222335567889999999999999999999999999999999
Q ss_pred cCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-------CHHHHHHhhcc------CCceEEEEEcCCCCCcc
Q 013210 135 CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-------DHEMVNSAIVQ------GRTKVLYFESISNPTLA 201 (447)
Q Consensus 135 ~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~------~~t~lV~i~~~~NptG~ 201 (447)
+++||+|+++.+.|.+.+..+ +..|.++..++.+ |+++|++++.. +++++|++++|+||+|.
T Consensus 87 ~~~gd~Vl~~~~~h~s~~~~~-----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~ 161 (370)
T TIGR02539 87 CKEGDWVVLDGLAHYTSYVAA-----ERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGN 161 (370)
T ss_pred hCCCCEEEECCcccHHHHHHH-----HHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCcc
Confidence 999999999999987776544 2368888888764 89999998832 36889999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCCCC--CCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhh-
Q 013210 202 VANIPELSRLAHDKGVTVVVDNTFSP--LVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALM- 278 (447)
Q Consensus 202 v~~l~~I~~la~~~gi~livD~~~~~--~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~- 278 (447)
+.|+++|.++|+++|+++|+|++|.. +..+....++|+++.|+||++++ +.++ |++++++++++.++.....+..
T Consensus 162 ~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~-~g~~-G~l~~~~~~i~~l~~~~~~~~~~ 239 (370)
T TIGR02539 162 LPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAA-SGPC-GVLGMSEEWEDIVLRKSRYSPVK 239 (370)
T ss_pred ccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEeeCcccccC-CCCE-EEEEECHHHHhhhcccccCCccc
Confidence 99999999999999999999999933 23344456789999999999996 4466 9999999999888765431111
Q ss_pred ---hcCCCc---cHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013210 279 ---LLGPTM---NPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLL 352 (447)
Q Consensus 279 ---~~g~~~---~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 352 (447)
..+.+. +..++..++.......++..+..++++++.+.|++.++++..+. + ..++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~----------------s~t~~v 302 (370)
T TIGR02539 240 EVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDIGFIQLGQK-P----------------KEHDLV 302 (370)
T ss_pred eeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEccC-C----------------CcCceE
Confidence 011111 12222222221111112233444556789999999887654221 1 123477
Q ss_pred EEEeCCH--------HHHHHHHHHhhc
Q 013210 353 CLDMETE--------EKANRLMNYLQN 371 (447)
Q Consensus 353 ~~~l~~~--------~~~~~l~~~l~~ 371 (447)
.+.++.. .....+.+.|..
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~L~e 329 (370)
T TIGR02539 303 KFETPGFHEIAQKHKRRGYFLYEELKK 329 (370)
T ss_pred EEECCchhHHhhhhccccHHHHHHHHh
Confidence 7776532 123457777775
No 75
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.97 E-value=9.5e-29 Score=233.37 Aligned_cols=232 Identities=23% Similarity=0.316 Sum_probs=181.8
Q ss_pred CCccccCCC--CchHHHHHHHHHHHhCC-----CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCc
Q 013210 89 DFFIYSRHF--NPTVLNLSRQMAALEGT-----EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPR 161 (447)
Q Consensus 89 ~~~~~~r~~--~~~~~~l~~~ia~l~g~-----~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~ 161 (447)
+.+.|+|.. .+.+..|++.++.++|. ++|++|+|+.+|+..++++++.+||+||+.+|.|.++.....
T Consensus 61 ~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~----- 135 (420)
T KOG0257|consen 61 STNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVV----- 135 (420)
T ss_pred hhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHh-----
Confidence 345555533 34566777888887663 459999999999999999999999999999999999998873
Q ss_pred ccCeeEEEeCCC-------------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCC
Q 013210 162 ACNITTTFVDIS-------------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 162 ~~g~~~~~v~~~-------------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~ 225 (447)
+.|..+++++.. |.++++.++ +++|++|++++||||||.+.+ |++|+++|++||+++|.|++|
T Consensus 136 maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~-t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevY 214 (420)
T KOG0257|consen 136 MAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKI-TEKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVY 214 (420)
T ss_pred hcCCcceeeccccccccccCccccCChHHHHhhc-cCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHh
Confidence 356666665532 899999999 999999999999999999985 889999999999999999999
Q ss_pred CCCCCCccC----------CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHc-
Q 013210 226 SPLVLSPAR----------LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSE- 294 (447)
Q Consensus 226 ~~~~~~~~~----------~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~- 294 (447)
..+.+++.+ ....+-++|++|.+|..|+|+ ||+++++.++..+...++... ...+++.+.+...+..
T Consensus 215 e~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrl-GW~igp~~L~~~~~~vh~~~~-~~~~Tp~q~A~a~a~~~ 292 (420)
T KOG0257|consen 215 EWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRL-GWAIGPKHLYSALFPVHQNFV-FTCPTPIQEASAAAFAL 292 (420)
T ss_pred HHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeee-eeeechHHhhhhHHHHhhccc-cccCcHHHHHHHHHHhh
Confidence 776665542 247899999999999999999 999999888888887766432 2233333333222211
Q ss_pred cC--------CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 013210 295 RI--------PHLGLRMKEHCHRALIFARRMKKLGLKVLYPG 328 (447)
Q Consensus 295 ~~--------~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~ 328 (447)
.+ ....+..+.++++++.|.+.|.+.+.++..|.
T Consensus 293 ~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p~ 334 (420)
T KOG0257|consen 293 ELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGPE 334 (420)
T ss_pred hhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCC
Confidence 22 22334778899999999999999988887665
No 76
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.97 E-value=2.5e-28 Score=244.76 Aligned_cols=330 Identities=14% Similarity=0.130 Sum_probs=223.9
Q ss_pred cccccCCH-HHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHh---cCCCC
Q 013210 66 ATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQL---CSSGG 139 (447)
Q Consensus 66 tt~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l---~~~gd 139 (447)
++++.+.+ +.+.+.+.....++.+.|.++.......+++++.+++++|++ .+++++|++++++.++.++ +++||
T Consensus 26 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd 105 (397)
T TIGR01976 26 GTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGD 105 (397)
T ss_pred cCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCC
Confidence 33443444 666666655444554445444434456789999999999974 4999999999998877665 57899
Q ss_pred eEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC------CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHH
Q 013210 140 HVVAARTLYGGTHALLTHFFPRACNITTTFVDIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAH 213 (447)
Q Consensus 140 ~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~ 213 (447)
+|+++.++|++....+...... .|.++.+++.+ |++++++++ +++|++|++++|+||||.+.|+++|.++|+
T Consensus 106 ~vl~~~~~~~s~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~l~~~i-~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~ 183 (397)
T TIGR01976 106 EVIVTRLDHEANISPWLQAAER-AGAKVKWARVDEATGELHPDDLASLL-SPRTRLVAVTAASNTLGSIVDLAAITELVH 183 (397)
T ss_pred EEEEcCCchHhHHHHHHHHHHh-cCCEEEEEeccccCCCcCHHHHHHhc-CCCceEEEEeCCCCCCCccCCHHHHHHHHH
Confidence 9999999998877655333333 68888887653 689999999 778999999999999999999999999999
Q ss_pred hcCCEEEEeCCCC--CCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhh------hhcCCCcc
Q 013210 214 DKGVTVVVDNTFS--PLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL------MLLGPTMN 285 (447)
Q Consensus 214 ~~gi~livD~~~~--~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~------~~~g~~~~ 285 (447)
++|+++++|+++. ....+..++++|+++.|+||++|+ ++ |+++.++++++.+........ ....++.+
T Consensus 184 ~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~---~~-G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~ 259 (397)
T TIGR01976 184 AAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFFGP---HM-GILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQ 259 (397)
T ss_pred HcCCEEEEehhhhccccCCCHHHcCCCEEEEechhhcCC---ce-EEEEEcHHHHhhCCCccccCccCCCcchhcCCCCC
Confidence 9999999999982 234455567899999999999974 34 999999888776653221100 01111222
Q ss_pred HH------HHHHHHccCC-------------cHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccC
Q 013210 286 PK------VAFELSERIP-------------HLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKE 345 (447)
Q Consensus 286 ~~------~a~~~~~~~~-------------~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~ 345 (447)
.. .|...+.... .+....++..++++++.+.|++.+ .++..+....
T Consensus 260 ~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~-------------- 325 (397)
T TIGR01976 260 YELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLA-------------- 325 (397)
T ss_pred HHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcc--------------
Confidence 11 1111121111 022334455677888888888876 4665442110
Q ss_pred CCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCC--CCeEEEEeCCCC
Q 013210 346 YGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGIS--AGLVRMSVGYLG 423 (447)
Q Consensus 346 ~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~--~~~iRiS~g~~~ 423 (447)
..++++.|.+++. ....+.+.|... | +.++.|..+. +.....+|++ .+.||||++ ..
T Consensus 326 -~~~~~~~~~~~~~-~~~~l~~~L~~~---g-I~v~~~~~~~--------------~~~~~~~~~~~~~~~iRis~~-~~ 384 (397)
T TIGR01976 326 -ARVPTVSFTVHGL-PPQRVVRRLADQ---G-IDAWAGHFYA--------------VRLLRRLGLNDEGGVVRVGLA-HY 384 (397)
T ss_pred -CCCceEEEEeCCc-CHHHHHHHHHHC---C-eEEEeCccch--------------HHHHHHhCCCCCCCeEEEEee-cc
Confidence 1345888888643 245677777753 3 5566553221 2223344554 468999999 89
Q ss_pred CHHHHHHHHHHHH
Q 013210 424 TLDQRWSQFEKAL 436 (447)
Q Consensus 424 ~~~~~i~~l~~al 436 (447)
+++++++.|.++|
T Consensus 385 ~t~~di~~l~~~l 397 (397)
T TIGR01976 385 NTAEEVDRLLEAL 397 (397)
T ss_pred CCHHHHHHHHHhC
Confidence 9999999988764
No 77
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=1.4e-27 Score=239.18 Aligned_cols=311 Identities=14% Similarity=0.192 Sum_probs=219.2
Q ss_pred HHHHHhhcC-CCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHH
Q 013210 74 ETMRRMFAG-ELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTH 152 (447)
Q Consensus 74 ~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~ 152 (447)
+++.+.++. .++++++.+..|. .+...++|+.+|+++|.+.+++++||++|++.++.+++++||+|+++.++|+++.
T Consensus 59 ~~~~~~~~~~~~~~~~s~~~~G~--~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~ 136 (393)
T TIGR01822 59 QAAKDALDEHGFGMSSVRFICGT--QDIHKELEAKIAAFLGTEDTILYASCFDANGGLFETLLGAEDAIISDALNHASII 136 (393)
T ss_pred HHHHHHHHHhCCCCCCcCcccCC--hHHHHHHHHHHHHHhCCCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHH
Confidence 556655554 2566666666654 5667899999999999999999999999999999999999999999999999988
Q ss_pred HHHHhhcCcccCeeEEEeCCCCHHHHHHhhcc---C--CceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCC-
Q 013210 153 ALLTHFFPRACNITTTFVDISDHEMVNSAIVQ---G--RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS- 226 (447)
Q Consensus 153 ~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~---~--~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~- 226 (447)
..+. . .+.....+...|+++|++++++ + ++++|++++++||+|.+.|+++|.++|++||+++|+|++|.
T Consensus 137 ~~~~-~----~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~ 211 (393)
T TIGR01822 137 DGVR-L----CKAKRYRYANNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHAT 211 (393)
T ss_pred HHHH-h----cCCceEEeCCCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccc
Confidence 7662 2 2333334455789999988832 2 78899999999999999999999999999999999999983
Q ss_pred CCC-CC------ccC--CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHH---HHHHHHc
Q 013210 227 PLV-LS------PAR--LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPK---VAFELSE 294 (447)
Q Consensus 227 ~~~-~~------~~~--~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~---~a~~~~~ 294 (447)
++. .. ... .++|+++.|+||++++ .++ ||+++++++++.+....... ..+++..+. ++..++.
T Consensus 212 g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g--~r~-G~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~a~~~al~ 286 (393)
T TIGR01822 212 GFLGPTGRGSHELCGVMGRVDIITGTLGKALGG--ASG-GFTTARKEVVELLRQRSRPY--LFSNSLPPAVVGASIKVLE 286 (393)
T ss_pred cCcCCCCCchHHhcCCCCCCeEEEEEChHHhhC--CCc-EEEEeCHHHHHHHHHhCccc--eecCCCCHHHHHHHHHHHH
Confidence 221 11 111 2579999999999874 354 99999999988887643211 122222222 2222222
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccc
Q 013210 295 RIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQ 374 (447)
Q Consensus 295 ~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~ 374 (447)
.++......+++.++++++.+.|++.+..+..+ .++++.+.+.+......|.+.|...
T Consensus 287 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--------------------~~~~~~i~~~~~~~~~~l~~~L~~~-- 344 (393)
T TIGR01822 287 MLEASNELRDRLWANTRYFRERMEAAGFDIKPA--------------------DHPIIPVMLYDAVLAQRFARRLLEE-- 344 (393)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHcCCCCCCC--------------------CCCEEEEEeCCHHHHHHHHHHHHHC--
Confidence 223334556778899999999998876543211 1337777776544567788887653
Q ss_pred cccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013210 375 FGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 375 ~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 441 (447)
| +.++ +.. .|.. ......||||++ ..++++.++.+.++|+++.+
T Consensus 345 -g-I~v~-~~~-----~~~~--------------~~~~~~iRis~~-~~~t~edi~~~~~~l~~~~~ 388 (393)
T TIGR01822 345 -G-IYVT-GFF-----YPVV--------------PKGQARIRVQIS-AAHTEEQLDRAVEAFTRIGR 388 (393)
T ss_pred -C-eeEe-eeC-----CCCC--------------CCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHH
Confidence 3 4444 311 0110 011246999999 88888889998888887644
No 78
>PRK14012 cysteine desulfurase; Provisional
Probab=99.97 E-value=2.2e-28 Score=245.51 Aligned_cols=339 Identities=16% Similarity=0.144 Sum_probs=222.5
Q ss_pred cccccccCCH-HHHHHhhc--CCCCCCCC-CccccCCCCchHHHHHHHHHHHhCCCe--EEEeCChHHHHHHHHHHhc--
Q 013210 64 ASATFTVMEP-ETMRRMFA--GELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTEA--AYCTASGMSAISSVLMQLC-- 135 (447)
Q Consensus 64 ~att~~~~~~-~~~~~~~~--~~~~~~~~-~~~~~r~~~~~~~~l~~~ia~l~g~~~--~~~tsggt~A~~~al~~l~-- 135 (447)
+++++..+++ +.+.+++. ..++|+.+ .+..+....+.++++|+.+|+++|++. +++++|||+|+++++.++.
T Consensus 10 a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~ 89 (404)
T PRK14012 10 SATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHF 89 (404)
T ss_pred cCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHh
Confidence 3455555555 77777776 56777654 333333334667899999999999854 9999999999999987763
Q ss_pred --CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHH
Q 013210 136 --SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPEL 208 (447)
Q Consensus 136 --~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I 208 (447)
++||+|+++.++|+++...+... .+ .|+++++++.+ |+++|++++ ++++++|++++++||||.+.|+++|
T Consensus 90 ~~~~gd~Vi~~~~~~~s~~~~~~~~-~~-~g~~~~~v~~~~~g~~d~~~l~~~i-~~~t~lv~~~~~~n~tG~~~~~~~I 166 (404)
T PRK14012 90 YQKKGKHIITSKTEHKAVLDTCRQL-ER-EGFEVTYLDPQSNGIIDLEKLEAAM-RDDTILVSIMHVNNEIGVIQDIAAI 166 (404)
T ss_pred hcCCCCEEEEecCccHHHHHHHHHH-Hh-CCCEEEEEccCCCCcCCHHHHHHhc-CCCCEEEEEECcCCCccchhhHHHH
Confidence 67999999999999887776433 23 58888888764 899999999 7889999999999999999999999
Q ss_pred HHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhh----hhcCC
Q 013210 209 SRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL----MLLGP 282 (447)
Q Consensus 209 ~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~----~~~g~ 282 (447)
.++|+++|+++|+|++| +..+++....++|++++|+||.+|++| + |+++.+++...++.....+.. ...|+
T Consensus 167 ~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g--~-G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt 243 (404)
T PRK14012 167 GEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIYGPKG--I-GALYVRRKPRVRLEAQMHGGGHERGMRSGT 243 (404)
T ss_pred HHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhccCCCc--e-EEEEEecCCCCCCCceecCCCccCCccCCC
Confidence 99999999999999999 334456666789999999999888655 5 555554433222221111000 01221
Q ss_pred Cc-cHHHHH-HHHcc-CCcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013210 283 TM-NPKVAF-ELSER-IPHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 358 (447)
Q Consensus 283 ~~-~~~~a~-~~~~~-~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 358 (447)
.. ....+. .++.. ........++..++++++.+.|++++. .+..+.....| ....++|.+.+
T Consensus 244 ~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~--------------~~~~~~~~~~~ 309 (404)
T PRK14012 244 LPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVP--------------GNLNVSFNYVE 309 (404)
T ss_pred cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCC--------------CEEEEEEeCcC
Confidence 11 111111 11111 122344566778888888888877653 33211101111 11245555433
Q ss_pred HHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCC----CCeEEEEeCCCCCHHHHHHHHHH
Q 013210 359 EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGIS----AGLVRMSVGYLGTLDQRWSQFEK 434 (447)
Q Consensus 359 ~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~----~~~iRiS~g~~~~~~~~i~~l~~ 434 (447)
. ..+...|+. +.|+.|..+. .....+...+..+|+. .+.||+|++ ..+++++++.+.+
T Consensus 310 ~---~~~~~~l~~------~~i~~g~~~~--------~~~~~~~~~~~~~~~~~~~~~~~iRls~~-~~~t~~dvd~~~~ 371 (404)
T PRK14012 310 G---ESLIMALKD------LAVSSGSACT--------SASLEPSYVLRALGLNDELAHSSIRFSLG-RFTTEEEIDYAIE 371 (404)
T ss_pred H---HHHHHhCCC------eEEEchhhhC--------CCCCCCCHHHHHcCCChhhcCceEEEEec-CCCCHHHHHHHHH
Confidence 3 345666653 5667774322 1112222333445553 478999999 8888888888888
Q ss_pred HHHHhh
Q 013210 435 ALSRMQ 440 (447)
Q Consensus 435 al~~~~ 440 (447)
+|+++.
T Consensus 372 ~l~~~~ 377 (404)
T PRK14012 372 LVRKSI 377 (404)
T ss_pred HHHHHH
Confidence 887653
No 79
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=5.9e-28 Score=236.02 Aligned_cols=282 Identities=11% Similarity=0.107 Sum_probs=195.8
Q ss_pred ccCCCCchHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEe
Q 013210 93 YSRHFNPTVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 170 (447)
Q Consensus 93 ~~r~~~~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v 170 (447)
..|+..+...+|++.+|+++|.+ .+++|+|+++++.+++. ++.+| .|++.+|+|+.+...++ ..|.++..+
T Consensus 34 ~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~-~vv~~~P~y~~y~~~~~-----~~G~~v~~v 106 (332)
T PRK06425 34 ISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVG-NIIIVEPNFNEYKGYAF-----THGIRISAL 106 (332)
T ss_pred cccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCC-cEEEeCCChHHHHHHHH-----HcCCeEEEE
Confidence 45667777899999999999864 49999999999999986 56666 57777999999988773 368888888
Q ss_pred CCCCHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc--------cCCCCeE
Q 013210 171 DISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP--------ARLGADV 239 (447)
Q Consensus 171 ~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~--------~~~g~di 239 (447)
+.++.+...+.++..++++|++++||||||.+.+ +++|+++|+++|+++|+||+|..+..+. ...+..+
T Consensus 107 p~~~~~~~~~~l~~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi 186 (332)
T PRK06425 107 PFNLINNNPEILNNYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVI 186 (332)
T ss_pred eCCcccCcHHHHhhcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEE
Confidence 7642111122332347899999999999999987 5677788899999999999997664321 1225689
Q ss_pred EEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHc-cCCc-HHHHHHHHHHHHHHHHHHH
Q 013210 240 VVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSE-RIPH-LGLRMKEHCHRALIFARRM 317 (447)
Q Consensus 240 ~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~-~~~~-l~~~~~~~~~~~~~l~~~L 317 (447)
++.||||.+|.+|.|+ ||+++++++++.+..... .. ..+..++..+.. ..+. +....+.+.++++++.+.|
T Consensus 187 ~~~SfSK~~~l~GlRi-Gy~v~~~~li~~l~~~~~----~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L 259 (332)
T PRK06425 187 IGRSLTKILGIPSLRI-GYIATDDYNMKISRKITE----PW--SVCDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNL 259 (332)
T ss_pred EEeecHHhcCCchhhh-eeeecCHHHHHHHHHcCC----CC--ccCHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 999999999988876543 11 122222211111 1122 3345667889999999999
Q ss_pred HhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccC
Q 013210 318 KKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTS 397 (447)
Q Consensus 318 ~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~ 397 (447)
++++..+..|. .|+++++.+++ ...+.+.|... | +.+..|....
T Consensus 260 ~~~g~~~~~~~-------------------~g~f~~~~~~~---~~~~~~~l~~~---g-i~v~~~~~f~---------- 303 (332)
T PRK06425 260 EAMGFRAAGDP-------------------SANFITFMIPD---AHDFYSYLLKN---G-ILVRLLDDYE---------- 303 (332)
T ss_pred HHCCCEECCCC-------------------CceEEEEEcCC---HHHHHHHHHHC---C-eEEEECCCCC----------
Confidence 98866543222 35688998862 45666666542 3 3444441100
Q ss_pred CCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 398 SELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 398 ~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+..++++|||+| . .+..+.|.++|+++
T Consensus 304 -----------~~~~~~iRis~~-~---~~~~~~l~~al~~~ 330 (332)
T PRK06425 304 -----------CLGEQYIRIAIR-R---RSFNIKLVNALRNF 330 (332)
T ss_pred -----------CCCCCEEEEEeC-C---HHHHHHHHHHHHHH
Confidence 112478999999 3 23455666666543
No 80
>PLN00175 aminotransferase family protein; Provisional
Probab=99.96 E-value=1.3e-27 Score=239.95 Aligned_cols=242 Identities=18% Similarity=0.208 Sum_probs=182.1
Q ss_pred HHHHHHHHHHh----C----CC-eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 102 LNLSRQMAALE----G----TE-AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 102 ~~l~~~ia~l~----g----~~-~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
.+|++.+++++ | .+ .+++|+|+++|+.+++.+++++||+|++++|.|+.+...+. ..|.++..++.
T Consensus 94 ~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~-----~~g~~~~~v~~ 168 (413)
T PLN00175 94 PELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS-----MAGAKIKTVTL 168 (413)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHH-----HcCCEEEEEEC
Confidence 46777777665 3 23 58999999999999999999999999999999998877763 25777777764
Q ss_pred C------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----cC----
Q 013210 173 S------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-----AR---- 234 (447)
Q Consensus 173 ~------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-----~~---- 234 (447)
+ |+++|++++ .+++++|++++|+||||.+.+ +++|+++|++||+++|+|++|..+.++. ..
T Consensus 169 ~~~~~~~~~~~l~~~~-~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~ 247 (413)
T PLN00175 169 RPPDFAVPEDELKAAF-TSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGM 247 (413)
T ss_pred CcccCCCCHHHHHHhc-CcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCC
Confidence 3 689999988 778999999999999999986 6788999999999999999996654321 11
Q ss_pred CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC-CcHHHHHHHHHHHHHHH
Q 013210 235 LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKEHCHRALIF 313 (447)
Q Consensus 235 ~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~~~~~~~~l 313 (447)
.+..+++.||||.++.+|.|+ ||+++++++++.+....... ....+.+.+.++..++... .++....+++.++++.+
T Consensus 248 ~~~vi~i~SfSK~~~~~G~Ri-G~~v~~~~l~~~l~~~~~~~-~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l 325 (413)
T PLN00175 248 YERTVTMNSLGKTFSLTGWKI-GWAIAPPHLTWGVRQAHSFL-TFATATPMQWAAVAALRAPESYYEELKRDYSAKKDIL 325 (413)
T ss_pred cCcEEEEecchhhccCcchhe-eeeEeCHHHHHHHHHHHhhc-cCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 246799999999999999999 99999999998887665421 1233444455555555443 33556667789999999
Q ss_pred HHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC--CHHHHHHHHHHhh
Q 013210 314 ARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME--TEEKANRLMNYLQ 370 (447)
Q Consensus 314 ~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~--~~~~~~~l~~~l~ 370 (447)
.+.|++++..+..|. .|.++++.+. +......|...|.
T Consensus 326 ~~~L~~~g~~~~~p~-------------------g~~f~~~~~~~~~~~~~~~~~~~ll 365 (413)
T PLN00175 326 VEGLKEVGFKVYPSS-------------------GTYFVMVDHTPFGFENDIAFCEYLI 365 (413)
T ss_pred HHHHHHCCCeecCCC-------------------eeEEEEEeccccCCCCHHHHHHHHH
Confidence 999998766544332 3557888874 2212456666654
No 81
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.96 E-value=1.1e-27 Score=238.80 Aligned_cols=282 Identities=18% Similarity=0.203 Sum_probs=200.4
Q ss_pred HHHHHHHHHHh----CC----C-eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 102 LNLSRQMAALE----GT----E-AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 102 ~~l~~~ia~l~----g~----~-~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
.++|+.+|+++ |. + .+++|+|+++++..+++.++++||+|+++.|+|+.+...+. ..|.++..++.
T Consensus 70 ~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~-----~~G~~v~~v~~ 144 (383)
T TIGR03540 70 LAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTL-----FAGGEPYEMPL 144 (383)
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHH-----hcCCEEEEEec
Confidence 56788888765 22 3 48899999999999999999999999999999999877662 26777776664
Q ss_pred C-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------cC--
Q 013210 173 S-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------AR-- 234 (447)
Q Consensus 173 ~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~~-- 234 (447)
+ |++++++.+ .+++++|++++|+||||.+.+ +++|+++|++||+++|+|++|..+.++. ..
T Consensus 145 ~~~~g~~~d~~~l~~~~-~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~ 223 (383)
T TIGR03540 145 KEENGFLPDFDAIPEDI-AKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVD 223 (383)
T ss_pred CcccCCccCHHHHHhhc-cccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCC
Confidence 2 678888888 678999999999999999998 6788999999999999999996543321 11
Q ss_pred --CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC-CcHHHHHHHHHHHHH
Q 013210 235 --LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKEHCHRAL 311 (447)
Q Consensus 235 --~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~~~~~~~ 311 (447)
...++++.|+||.+|.+|.|+ ||+++++++++.+...+... ....+.+.+.++..++... +++....+.+.++++
T Consensus 224 ~~~~~~i~~~SfSK~~g~~GlRi-G~~i~~~~l~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 301 (383)
T TIGR03540 224 GAKDVGIEFHSLSKTYNMTGWRI-GMAVGNADLIAGLGKVKTNV-DSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRD 301 (383)
T ss_pred CcccCEEEEEecccccCCcccee-eEEeCCHHHHHHHHHHHHhc-ccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 135688999999999999999 99999999998887665411 1111223344444444432 445556677889999
Q ss_pred HHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccc
Q 013210 312 IFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSC 391 (447)
Q Consensus 312 ~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~ 391 (447)
.+.+.|++++..+..|. .|.++++.+++..+...|.+.|.. +.| +.+..|...
T Consensus 302 ~~~~~L~~~~~~~~~~~-------------------~~~~~~~~l~~~~~~~~~~~~ll~--~~g-i~v~~g~~f----- 354 (383)
T TIGR03540 302 LLLEALKKIGIDVEKPK-------------------ATFYVWVPVPEGYTSAEFAARLLE--ETG-VVVTPGVGF----- 354 (383)
T ss_pred HHHHHHHhCCCEecCCC-------------------cceEEEEECCCCCCHHHHHHHHHH--HCC-EEEecchhh-----
Confidence 99999998866554332 345789998743234567666532 123 344444211
Q ss_pred cccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 392 SGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 392 ~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
. ....+++|||++ .. + +.+.++|+.+.
T Consensus 355 ---~-------------~~~~~~~Ris~~-~~--~---~~l~~~l~~l~ 381 (383)
T TIGR03540 355 ---G-------------EYGEGYIRISLT-VP--D---ERLEEAVARIK 381 (383)
T ss_pred ---C-------------ccCCCeEEEEec-CC--H---HHHHHHHHHHh
Confidence 0 001478999999 54 2 36666666554
No 82
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.5e-27 Score=236.33 Aligned_cols=242 Identities=19% Similarity=0.177 Sum_probs=177.4
Q ss_pred HHHHHHHHHH----hC----CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC
Q 013210 102 LNLSRQMAAL----EG----TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 173 (447)
Q Consensus 102 ~~l~~~ia~l----~g----~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~ 173 (447)
..+++.+|++ .| .+.+++|+|+++|+..++..++++||+|+++.|.|+.+...+. ..|.++..++.+
T Consensus 64 ~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~-----~~g~~~~~v~~~ 138 (382)
T PRK06108 64 PELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPK-----ILGARVVCVPLD 138 (382)
T ss_pred HHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHH-----HCCCEEEEeeCC
Confidence 3566666655 35 3569999999999999999999999999999999998877663 257777776652
Q ss_pred --------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-------cC-
Q 013210 174 --------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-------AR- 234 (447)
Q Consensus 174 --------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-------~~- 234 (447)
|++++++.+ ++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+.+.+ ..
T Consensus 139 ~~~~~~~~d~~~l~~~~-~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~ 217 (382)
T PRK06108 139 FGGGGWTLDLDRLLAAI-TPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDI 217 (382)
T ss_pred CCCCCccCCHHHHHHhc-CccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhc
Confidence 688999988 678999999999999999985 6788999999999999999996554320 11
Q ss_pred ---CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC-CcHHHHHHHHHHHH
Q 013210 235 ---LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKEHCHRA 310 (447)
Q Consensus 235 ---~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~~~~~~ 310 (447)
.+.++++.|+||.+|++|.|+ ||+++++++++.+..... ......+.+.+.++...+... +.+....+++.+++
T Consensus 218 ~~~~~~~i~~~S~SK~~g~~G~Ri-G~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 295 (382)
T PRK06108 218 AEPDDRIIFVNSFSKNWAMTGWRL-GWLVAPPALGQVLEKLIE-YNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSR 295 (382)
T ss_pred CCCcCCEEEEeechhhccCcccce-eeeeCCHHHHHHHHHHHH-hcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 146799999999999999999 999999999988876543 111222333344444444432 33556667788888
Q ss_pred HHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhh
Q 013210 311 LIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQ 370 (447)
Q Consensus 311 ~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~ 370 (447)
+.+.+.|++.+ ..+..|. .|.++++.++.......+.+.|.
T Consensus 296 ~~l~~~L~~~~~~~~~~p~-------------------~g~~~~~~l~~~~~~~~~~~~ll 337 (382)
T PRK06108 296 DHLVDALRALPGVEVAKPD-------------------GAMYAFFRIPGVTDSLALAKRLV 337 (382)
T ss_pred HHHHHHHHhCCCCcccCCC-------------------eeEEEEEeCCCCCCHHHHHHHHH
Confidence 99999998763 3433221 34577888874333456666653
No 83
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=3.7e-27 Score=233.11 Aligned_cols=287 Identities=21% Similarity=0.236 Sum_probs=204.6
Q ss_pred ccCCCCchHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhcCCC-CeEEEeCCCchhHHHHHHhhcCcccCeeEEE
Q 013210 93 YSRHFNPTVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLCSSG-GHVVAARTLYGGTHALLTHFFPRACNITTTF 169 (447)
Q Consensus 93 ~~r~~~~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~ 169 (447)
..++.++...++++.+|+++|.+ ++++|+|+++++.+++.+++.+| +.|+++.|.|..+...++ ..|.++..
T Consensus 53 ~~~Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~-----~~g~~~~~ 127 (364)
T PRK04781 53 TRRYPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCAR-----LQNAPLVE 127 (364)
T ss_pred hccCCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHH-----HcCCEEEE
Confidence 34455555689999999999864 59999999999999999998888 799999999987765542 25777777
Q ss_pred eCCC--------CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHh--cCCEEEEeCCCCCCCCCc------c
Q 013210 170 VDIS--------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD--KGVTVVVDNTFSPLVLSP------A 233 (447)
Q Consensus 170 v~~~--------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~--~gi~livD~~~~~~~~~~------~ 233 (447)
++.+ |++++++.+.++++++|++++||||||.+.+.+++.++++. +++++|+||+|..+...+ .
T Consensus 128 v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~ 207 (364)
T PRK04781 128 VPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLA 207 (364)
T ss_pred EecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHh
Confidence 7641 56777554436789999999999999999998888887764 479999999996664322 1
Q ss_pred CCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC--CcHHHHHHHHHHHHH
Q 013210 234 RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI--PHLGLRMKEHCHRAL 311 (447)
Q Consensus 234 ~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~--~~l~~~~~~~~~~~~ 311 (447)
..+..+++.||||.||.+|.|+ ||+++++++++.+.+.+.. ...+...+..+..++..- ......++++.++++
T Consensus 208 ~~~~vi~~~SfSK~~gl~GlRv-Gy~v~~~~l~~~l~~~~~~---~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~ 283 (364)
T PRK04781 208 RYDNLAVLRTLSKAHALAAARI-GSLIANAELIAVLRRCQAP---YPVPTPCAALAEQALSAPALAVTARRVAEVRAERE 283 (364)
T ss_pred hCCCEEEEecChhhccccccee-eeeeCCHHHHHHHHhccCC---CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 2256899999999999999999 9999999999988876551 222333344444444332 234456667888899
Q ss_pred HHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCcccccc
Q 013210 312 IFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMS 390 (447)
Q Consensus 312 ~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~ 390 (447)
.+.+.|++++. ....|. .|.++++.+++ ...+.+.+... | +.|..|...
T Consensus 284 ~l~~~L~~~~~~~~~~p~-------------------~g~f~~~~~~~---~~~~~~~l~~~---g-I~v~~~~~~---- 333 (364)
T PRK04781 284 RLHAALAQLPGVRRVYPS-------------------QGNFLLVRFDD---AEAAFQALLAA---G-VVVRDQRAA---- 333 (364)
T ss_pred HHHHHHHhCCCCCeECCC-------------------CCcEEEEEcCC---HHHHHHHHHHC---C-eEEeeCCCC----
Confidence 99999988733 223343 46789999874 34556666542 3 444433110
Q ss_pred ccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 391 CSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 391 ~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
.+. ++++|||+| . .+..+.|.++|++++
T Consensus 334 -----------------~~~-~~~~Ris~~-~---~~~~~~l~~al~~~~ 361 (364)
T PRK04781 334 -----------------PRL-SDALRITLG-T---PEQNDRVLAALQRTQ 361 (364)
T ss_pred -----------------CCC-CCeEEEeCC-C---HHHHHHHHHHHHHHH
Confidence 011 478999999 4 344556666666654
No 84
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=3.1e-27 Score=233.80 Aligned_cols=251 Identities=18% Similarity=0.212 Sum_probs=184.5
Q ss_pred ccccCCH-HHHHHhhcCCCCCCCC-CccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEe
Q 013210 67 TFTVMEP-ETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAA 144 (447)
Q Consensus 67 t~~~~~~-~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~ 144 (447)
-+..+.+ +.+.++. ..++||++ .+..+...++.+.++++.+|+++|.+.+++|+|+++++..++.+++++||+|+++
T Consensus 11 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~ 89 (361)
T cd06452 11 GRLTPEARKALIEWG-DGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVD 89 (361)
T ss_pred CCCCHHHHHHHHHHh-cccCCccccccccccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Confidence 3444444 6666666 44577765 5667777788999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHhhcCcccCeeEEEeCCC-------CHHHHHHhhcc------CCceEEEEEcCCCCCccccCHHHHHHH
Q 013210 145 RTLYGGTHALLTHFFPRACNITTTFVDIS-------DHEMVNSAIVQ------GRTKVLYFESISNPTLAVANIPELSRL 211 (447)
Q Consensus 145 ~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~------~~t~lV~i~~~~NptG~v~~l~~I~~l 211 (447)
.+.|.+....+. ..|+++++++.+ |++++++++.. +++++|++++|+||+|.+.|+++|.++
T Consensus 90 ~~~~~~~~~~~~-----~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~ 164 (361)
T cd06452 90 GLAHYTSYVAAE-----RAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKV 164 (361)
T ss_pred CCcchHHHHHHH-----hcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHH
Confidence 999888765442 268888877643 78899888831 378999999999999999999999999
Q ss_pred HHhcCCEEEEeCCCC--CCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhh----hhcCCCcc
Q 013210 212 AHDKGVTVVVDNTFS--PLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL----MLLGPTMN 285 (447)
Q Consensus 212 a~~~gi~livD~~~~--~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~----~~~g~~~~ 285 (447)
|+++|+++|+|++|. .+.++..++++|+++.|+||++++++ ++ |++++++++++.+...+.... ...+.+..
T Consensus 165 ~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~-~~-G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 242 (361)
T cd06452 165 CHEYGVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASA-PI-GVLATTEEWADIVFRTSQMFKIKEVELLGCTLR 242 (361)
T ss_pred HHHcCCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCC-Ce-EEEEECHHHHHHHhccccccccceeeeeccccC
Confidence 999999999999993 23456666789999999999998654 66 899999998888765443110 01122221
Q ss_pred HHHHHHHHccCCcH---HHHHHHHHHHHHHHHHHHHhC-CCeee
Q 013210 286 PKVAFELSERIPHL---GLRMKEHCHRALIFARRMKKL-GLKVL 325 (447)
Q Consensus 286 ~~~a~~~~~~~~~l---~~~~~~~~~~~~~l~~~L~~~-~~~v~ 325 (447)
...+..++..++.+ ..+..+..++++++.+.|+++ ++++.
T Consensus 243 ~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~v~ 286 (361)
T cd06452 243 GAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKIEGIKQL 286 (361)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 11111111122222 223344445668899999988 55665
No 85
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.8e-27 Score=231.74 Aligned_cols=289 Identities=17% Similarity=0.203 Sum_probs=217.8
Q ss_pred cccCCCCchHHHHHHHHHHHhC-C--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEE
Q 013210 92 IYSRHFNPTVLNLSRQMAALEG-T--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 168 (447)
Q Consensus 92 ~~~r~~~~~~~~l~~~ia~l~g-~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~ 168 (447)
.+.|+.++...++++.+|+.+| . +.++.++|+++.+..++++++.+||.|+++.|+|..+...++ ..|.++.
T Consensus 50 ~~~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~-----~~g~~~~ 124 (356)
T COG0079 50 KLNRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQ-----LAGAEVV 124 (356)
T ss_pred hhccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHH-----hcCCeEE
Confidence 3556677778899999999999 4 458889999999999999999999999999999998877763 3688888
Q ss_pred EeCC----CCHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhc--CCEEEEeCCCCCCCC-Ccc----CCCC
Q 013210 169 FVDI----SDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK--GVTVVVDNTFSPLVL-SPA----RLGA 237 (447)
Q Consensus 169 ~v~~----~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~--gi~livD~~~~~~~~-~~~----~~g~ 237 (447)
.++. .|++.+.+++ .+++++|++++||||||...+.++|.+++... +.++|+||+|..|.- +.. ..+.
T Consensus 125 ~v~~~~~~~d~~~~~~~~-~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~n 203 (356)
T COG0079 125 KVPLKEFRLDLDAILAAI-RDKTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPN 203 (356)
T ss_pred EecccccccCHHHHHHhh-hcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCC
Confidence 8877 4788998888 66899999999999999999988888887754 889999999965543 111 2345
Q ss_pred eEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHH
Q 013210 238 DVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRM 317 (447)
Q Consensus 238 di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L 317 (447)
.+++.||||+||.+|.|+ ||+++++++++.+++.+.. +.-+.++..++..++...+.+....++....++++.+.|
T Consensus 204 livlRTfSKa~gLAGlRl-Gy~ia~~~~i~~l~~vr~p---~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l 279 (356)
T COG0079 204 LIVLRTFSKAFGLAGLRV-GYAIANPELIAALNKVRPP---FNVSSPALAAAIAALRDADYLEESVERIREERERLYAAL 279 (356)
T ss_pred EEEEEecHHhhhcchhce-eeccCCHHHHHHHHHhcCC---CCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999 9999999999999988762 223444444454545544567778888899999999999
Q ss_pred HhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccC
Q 013210 318 KKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTS 397 (447)
Q Consensus 318 ~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~ 397 (447)
+.++..-.+|. .+.++.+.++..+ +..+.+.|..+ |++.-..+ +
T Consensus 280 ~~~~~~~v~pS-------------------~aNFvlv~~~~~~-~~~l~~~L~~~---giivR~~~------------~- 323 (356)
T COG0079 280 KALGLFGVFPS-------------------QANFVLVRVPDAE-AAALAEALLKK---GILVRDCS------------S- 323 (356)
T ss_pred HhCCCCeecCC-------------------CCcEEEEECCCcc-HHHHHHHHHHC---CEEEEeCC------------C-
Confidence 99874323343 2458888887634 55677777652 32221111 0
Q ss_pred CCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 398 SELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 398 ~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
.+..++++|||+| . . +.-+.|.++|+++.
T Consensus 324 ----------~~~~~~~lRitvg-t--~-een~~ll~AL~~~~ 352 (356)
T COG0079 324 ----------VGLLPGYLRITVG-T--P-EENDRLLAALREVL 352 (356)
T ss_pred ----------CCCCCCeEEEEeC-C--H-HHHHHHHHHHHHHH
Confidence 1334679999999 3 2 22256666665543
No 86
>PRK08960 hypothetical protein; Provisional
Probab=99.96 E-value=5e-27 Score=234.40 Aligned_cols=242 Identities=20% Similarity=0.224 Sum_probs=179.2
Q ss_pred HHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 101 VLNLSRQMAALEG--------TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 101 ~~~l~~~ia~l~g--------~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
..++|+.+|++++ .+++++|+|+++|++.++.+++.+||+|++++|+|+.+...+. ..|.++..++.
T Consensus 71 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~-----~~g~~~~~v~~ 145 (387)
T PRK08960 71 LPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLR-----LVEGAAQLVPV 145 (387)
T ss_pred CHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-----hcCCeEEEEec
Confidence 4678888888862 3569999999999999999999999999999999999887763 24556655543
Q ss_pred C-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----cCC-C
Q 013210 173 S-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-----ARL-G 236 (447)
Q Consensus 173 ~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-----~~~-g 236 (447)
+ |++++++++ +++++++++.+|+||||.+.+ +++|+++|+++|+++|+|++|..+.++. ... .
T Consensus 146 ~~~~~~~~d~~~l~~~~-~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~ 224 (387)
T PRK08960 146 GPDSRYQLTPALVERHW-NADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDD 224 (387)
T ss_pred CcccCCCCCHHHHHHHh-CccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccC
Confidence 2 688999988 778899999999999999997 4567778999999999999996654321 112 3
Q ss_pred CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHcc-C-CcHHHHHHHHHHHHHHHH
Q 013210 237 ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-I-PHLGLRMKEHCHRALIFA 314 (447)
Q Consensus 237 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~-~~l~~~~~~~~~~~~~l~ 314 (447)
..+++.|+||.+|.+|.|+ ||+++++++++.+....... ....+.+.+.++..++.. . +++....+++.++++.+.
T Consensus 225 ~vi~~~S~SK~~g~~GlRi-G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~ 302 (387)
T PRK08960 225 DAFVLNSFSKYFGMTGWRL-GWLVAPPAAVPELEKLAQNL-YISASTPAQHAALACFEPETLAILEARRAEFARRRDFLL 302 (387)
T ss_pred CEEEEeecccccCCcccEE-EEEEcCHHHHHHHHHHHhhh-ccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHH
Confidence 5689999999999999999 99999999998887765521 122234444444444432 1 345556667888999999
Q ss_pred HHHHhCCCee-eCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHh
Q 013210 315 RRMKKLGLKV-LYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYL 369 (447)
Q Consensus 315 ~~L~~~~~~v-~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~l~~~l 369 (447)
+.|++++..+ ..|. .|.++++.++. ..+...+.+.|
T Consensus 303 ~~L~~~~~~~~~~p~-------------------g~~f~~~~~~~~~~~~~~~~~~l 340 (387)
T PRK08960 303 PALRELGFGIAVEPQ-------------------GAFYLYADISAFGGDAFAFCRHF 340 (387)
T ss_pred HHHHhcCCcCCcCCC-------------------eeEEEEEeccccCCCHHHHHHHH
Confidence 9998876533 2232 45688888863 12245666654
No 87
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=4.4e-27 Score=231.72 Aligned_cols=241 Identities=15% Similarity=0.200 Sum_probs=182.3
Q ss_pred CchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC--
Q 013210 98 NPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-- 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-- 173 (447)
.+....+|+.+|++++. +.+++|+|+++++..++.+++++||+|+++.|.|+.+...+. ..|.++..++.+
T Consensus 58 ~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~~~~v~~~~~ 132 (351)
T PRK14807 58 DPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSK-----IAGAVEIPVKLKED 132 (351)
T ss_pred CccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHH-----HcCCeEEEeecCCC
Confidence 44457899999999986 459999999999999999999999999999999997766552 257777776653
Q ss_pred ---CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCC-c----cCCCCeEEEeCCC
Q 013210 174 ---DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLS-P----ARLGADVVVHSIS 245 (447)
Q Consensus 174 ---d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~-~----~~~g~di~~~S~s 245 (447)
|++++++++.+.++++|++++|+||||.+.+.+++.+++++++.++|+|++|..+.-. . ...+..+++.|+|
T Consensus 133 ~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~S 212 (351)
T PRK14807 133 YTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLS 212 (351)
T ss_pred CCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecch
Confidence 7899999884358999999999999999999999999999988899999999544211 1 1235689999999
Q ss_pred ccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 013210 246 KFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKL-GLKV 324 (447)
Q Consensus 246 K~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~v 324 (447)
|.+|.+|.|+ ||+++++++++.+...... ...+.+.+.++...+.. ..+.+..+.+.++++.+.+.|++. +..+
T Consensus 213 K~~~~~GlRi-G~~v~~~~~~~~~~~~~~~---~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~r~~l~~~l~~~~g~~~ 287 (351)
T PRK14807 213 KAFGLAGLRV-GYAVANENILKYLNLVKSP---YNINSLSQVIALKVLRT-GVLKERVNYILNERERLIKELSKIPGIKV 287 (351)
T ss_pred Hhcccchhce-eeeecCHHHHHHHHHccCC---CCcCHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHhCCCcEE
Confidence 9999999999 9999999999988765441 12233444444444432 345556667788888899999765 3333
Q ss_pred eCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 325 LYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 325 ~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
.|. .|+++++.+++ ...+.+.|..
T Consensus 288 -~~~-------------------~~~~~~i~~~~---~~~~~~~l~~ 311 (351)
T PRK14807 288 -YPS-------------------KTNFILVKFKD---ADYVYQGLLE 311 (351)
T ss_pred -CcC-------------------CccEEEEEcCC---HHHHHHHHHH
Confidence 222 35688888874 3455556554
No 88
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=5.5e-28 Score=238.86 Aligned_cols=276 Identities=14% Similarity=0.154 Sum_probs=199.0
Q ss_pred CchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC--
Q 013210 98 NPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-- 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-- 173 (447)
.....++++.+|++++. +.+++|+|+++++.+++++++++||+|+++.|+|+.+...+. ..|.++..++.+
T Consensus 63 ~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~-----~~g~~v~~v~~~~~ 137 (366)
T PRK01533 63 DGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAI-----IEGCEVKEVALNNG 137 (366)
T ss_pred CCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHH-----HcCCEEEEeecCCC
Confidence 33456899999999986 459999999999999999999999999999999999887763 368888877664
Q ss_pred --CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHH---hcCCEEEEeCCCCCCCCC-----c----cCCCCeE
Q 013210 174 --DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAH---DKGVTVVVDNTFSPLVLS-----P----ARLGADV 239 (447)
Q Consensus 174 --d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~---~~gi~livD~~~~~~~~~-----~----~~~g~di 239 (447)
|+++|++++ ++++++|++++||||||.+.+.+++.++++ +++ ++|+||+|..+... . ...+..+
T Consensus 138 ~~d~~~l~~~~-~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi 215 (366)
T PRK01533 138 VYDLDEISSVV-DNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNIL 215 (366)
T ss_pred CcCHHHHHHHh-CcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEE
Confidence 799999988 778999999999999999998776655554 444 67889998544321 1 1225689
Q ss_pred EEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHh
Q 013210 240 VVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKK 319 (447)
Q Consensus 240 ~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 319 (447)
++.||||.||.+|+|+ ||+++++++++.+...+.. ...+.+.+.++..++...+.+....+...++++++.+.++.
T Consensus 216 ~~~SfSK~~~l~GlRi-G~~i~~~~~~~~l~~~~~~---~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~ 291 (366)
T PRK01533 216 VLRTFSKAYGLASFRV-GYAVGHEELIEKLNVVRLP---FNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKE 291 (366)
T ss_pred EEeCchHHhcChHHHH-hHHhCCHHHHHHHHHhcCC---CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999 9999999999988876531 23333444445455543333444555667778888888887
Q ss_pred CCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCC
Q 013210 320 LGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSE 399 (447)
Q Consensus 320 ~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~ 399 (447)
+++++..| .|+++++.+++ ...+.+.|... | +.|.. +
T Consensus 292 ~g~~~~~~--------------------~~nf~~~~~~~---~~~~~~~l~~~---G-I~Vr~-----------~----- 328 (366)
T PRK01533 292 NEIPFYQS--------------------QTNFIFLPVEN---GGEIYEACAHA---G-FIIRP-----------F----- 328 (366)
T ss_pred CCCccCCC--------------------cCcEEEEeCCC---HHHHHHHHHHC---C-cEEcc-----------C-----
Confidence 76544322 35689998863 34566666652 2 23221 0
Q ss_pred CCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 400 LNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 400 ~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+++||||+|..++.+.+++.|.+.++..
T Consensus 329 ------------~~~iRis~~~~~~~~~l~~al~~~~~~~ 356 (366)
T PRK01533 329 ------------PNGVRITVGTREQNEGVISVLQQHFENK 356 (366)
T ss_pred ------------CCceEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 2569999993355555566665555443
No 89
>PRK07682 hypothetical protein; Validated
Probab=99.96 E-value=1.9e-27 Score=236.84 Aligned_cols=244 Identities=19% Similarity=0.240 Sum_probs=180.9
Q ss_pred hHHHHHHHHHHHhC--------CC-eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEe
Q 013210 100 TVLNLSRQMAALEG--------TE-AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 170 (447)
Q Consensus 100 ~~~~l~~~ia~l~g--------~~-~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v 170 (447)
....+|+.+|++++ .+ ++++|+|+++|+.+++++++++||+|++++|+|+.+...+.. .|.++..+
T Consensus 58 g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~-----~g~~~~~~ 132 (378)
T PRK07682 58 GLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTL-----AGGVPVPV 132 (378)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHH-----cCCEEEEe
Confidence 34678888888764 23 699999999999999999999999999999999988776632 45555555
Q ss_pred CC-------CCHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----cC-
Q 013210 171 DI-------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-----AR- 234 (447)
Q Consensus 171 ~~-------~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-----~~- 234 (447)
+. .|++++++++ .+++++|++++|+||||.+.+ +++|+++|++|++++|+|++|..+.++. ..
T Consensus 133 ~~~~~~~~~~d~~~l~~~~-~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 211 (378)
T PRK07682 133 ATTLENEFKVQPAQIEAAI-TAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASI 211 (378)
T ss_pred ecCCccCCCCCHHHHHhhc-CcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhc
Confidence 43 2789999988 678999999999999999986 7889999999999999999996654421 11
Q ss_pred ---CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC-CcHHHHHHHHHHHH
Q 013210 235 ---LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKEHCHRA 310 (447)
Q Consensus 235 ---~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~~~~~~ 310 (447)
...++++.|+||.++.+|.|+ ||+++++++++.+..... ......+.+.+.++..++... .++....+++++++
T Consensus 212 ~~~~~~~i~~~S~SK~~~~~GlR~-G~~~~~~~~i~~l~~~~~-~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 289 (378)
T PRK07682 212 KGMRERTILISGFSKGFAMTGWRL-GFIAAPVYFSEAMLKIHQ-YSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRR 289 (378)
T ss_pred ccccCCEEEEecCcccccChhhhh-hhhhcCHHHHHHHHHHHH-hhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 146799999999999999999 999999999998876554 111223334444444444432 34555667789999
Q ss_pred HHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHhh
Q 013210 311 LIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYLQ 370 (447)
Q Consensus 311 ~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~l~~~l~ 370 (447)
+.+.+.|++++..+..|. .|.++|+.+.. ..+...+.+.+.
T Consensus 290 ~~~~~~L~~~~~~~~~p~-------------------g~~~~~~~~~~~~~~~~~~~~~ll 331 (378)
T PRK07682 290 NFFVTSFNEIGLTCHVPG-------------------GAFYAFPSISSTGLSSEEFAEQLL 331 (378)
T ss_pred HHHHHHHHHCCCccCCCC-------------------eeEEEEEeccCCCCCHHHHHHHHH
Confidence 999999998865544332 34577777641 223456666653
No 90
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=1.5e-27 Score=236.73 Aligned_cols=278 Identities=16% Similarity=0.206 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC----C
Q 013210 101 VLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS----D 174 (447)
Q Consensus 101 ~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~----d 174 (447)
..++++.+|++++++ .+++|+|+++++..++.+++++||+|+++.|.|..+...+. ..|.++..++.+ |
T Consensus 69 ~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~-----~~g~~~~~~~~~~~~~~ 143 (367)
T PRK02731 69 GFELKAALAEKFGVDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQ-----AVGAKPVEVPAKDYGHD 143 (367)
T ss_pred HHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHH-----HcCCeEEEecccCCCCC
Confidence 468999999999874 59999999999999999889999999999999987765442 268888877654 8
Q ss_pred HHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhc--CCEEEEeCCCCCCCCCc-----c----CCCCeEEEeC
Q 013210 175 HEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK--GVTVVVDNTFSPLVLSP-----A----RLGADVVVHS 243 (447)
Q Consensus 175 ~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~--gi~livD~~~~~~~~~~-----~----~~g~di~~~S 243 (447)
++++++++ ++++++|++++|+||||.+.+.++|.++++.. |+++|+|++|..+.+.. . .....+++.|
T Consensus 144 ~~~l~~~~-~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S 222 (367)
T PRK02731 144 LDAMLAAV-TPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRT 222 (367)
T ss_pred HHHHHHHh-CCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEee
Confidence 89999998 67899999999999999999999999999874 89999999984433211 1 1145788999
Q ss_pred CCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCe
Q 013210 244 ISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLK 323 (447)
Q Consensus 244 ~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~ 323 (447)
+||.+|.+|.|+ ||+++++++++.+...... ...+.+++.++...+...+.+....+.+.++++.+.+.|++.+..
T Consensus 223 ~SK~~g~~G~Ri-G~l~~~~~~~~~l~~~~~~---~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 298 (367)
T PRK02731 223 FSKAYGLAGLRV-GYGIAPPEIIDALNRVRQP---FNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELGLE 298 (367)
T ss_pred ehHhhcCcccce-eeeeCCHHHHHHHHHccCC---CCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 999999999999 9999999999888766541 222334444444444433334455566788888899999887654
Q ss_pred eeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHH
Q 013210 324 VLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAE 403 (447)
Q Consensus 324 v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~ 403 (447)
+. |. .|+++++.++.......+.+.|... | +.+..|..
T Consensus 299 ~~-~~-------------------~g~~~~i~~~~~~~~~~~~~~L~~~---g-I~v~~~~~------------------ 336 (367)
T PRK02731 299 YI-PS-------------------VGNFILVDFDDGKDAAEAYQALLKR---G-VIVRPVAG------------------ 336 (367)
T ss_pred cC-CC-------------------CceEEEEECCCCCCHHHHHHHHHHC---C-EEEEeCCC------------------
Confidence 32 21 3569999986433456777777652 3 34444311
Q ss_pred HHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 404 EKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 404 ~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
.+ .+++||||++ . .+.++.+.++|+++
T Consensus 337 ----~~-~~~~iRis~~-~---~~e~~~l~~aL~~~ 363 (367)
T PRK02731 337 ----YG-LPNALRITIG-T---EEENRRFLAALKEF 363 (367)
T ss_pred ----CC-CCCeEEEecC-C---HHHHHHHHHHHHHH
Confidence 11 1468999999 3 33455666666544
No 91
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=2e-27 Score=235.04 Aligned_cols=277 Identities=20% Similarity=0.189 Sum_probs=202.7
Q ss_pred chHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC---
Q 013210 99 PTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 173 (447)
....++++.+|++++. +.+++|+|+++++..++++++++||+|+++.|+|+.+...+. ..|.++..++.+
T Consensus 64 ~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~-----~~g~~~~~~~~~~~~ 138 (359)
T PRK03158 64 GYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAI-----IEGAEVREVPLKDGG 138 (359)
T ss_pred CcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHH-----HcCCeEEEEecCCCC
Confidence 3457899999999986 459999999999999999999999999999999998876652 257777777653
Q ss_pred -CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHh--cCCEEEEeCCCCCCCCCc---------cCCCCeEEE
Q 013210 174 -DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD--KGVTVVVDNTFSPLVLSP---------ARLGADVVV 241 (447)
Q Consensus 174 -d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~--~gi~livD~~~~~~~~~~---------~~~g~di~~ 241 (447)
|++++++++ ++++++|++++|+||||.+.+.++|.++++. +|+++|+||+|..+.+.. ...+.++++
T Consensus 139 ~d~~~l~~~~-~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~ 217 (359)
T PRK03158 139 HDLEAMLKAI-DEQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVL 217 (359)
T ss_pred cCHHHHHHhc-CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEE
Confidence 789998888 7789999999999999999999999998887 599999999995544321 123578999
Q ss_pred eCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCC
Q 013210 242 HSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLG 321 (447)
Q Consensus 242 ~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~ 321 (447)
.|+||.+|.+|.|+ ||+++++++++.+...+.. ...+.+++.++..++...+++....+.+.++++.+.+.|++.+
T Consensus 218 ~S~SK~~g~~GlRi-G~~v~~~~~~~~~~~~~~~---~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 293 (359)
T PRK03158 218 RTFSKAYGLAALRV-GYGIASEELIEKLNIARPP---FNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEYG 293 (359)
T ss_pred EechHhhcCcchhh-ehhcCCHHHHHHHHHhcCC---CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999 9999999999888776541 2334444555555554333344455566778888888888775
Q ss_pred CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCC
Q 013210 322 LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELN 401 (447)
Q Consensus 322 ~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~ 401 (447)
..+. |. .|.++++.++. ....+.+.|... | +.+..|..
T Consensus 294 ~~~~-~~-------------------~g~~i~~~~~~--~~~~~~~~l~~~---g-v~v~~g~~---------------- 331 (359)
T PRK03158 294 LFYY-PS-------------------QTNFIFVDTGR--DANELFEALLKK---G-YIVRSGAA---------------- 331 (359)
T ss_pred CeeC-CC-------------------cCcEEEEECCC--CHHHHHHHHHHC---C-eEEeeCCC----------------
Confidence 5442 22 35588888752 235666666542 3 45554421
Q ss_pred HHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 402 AEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 402 ~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
.| .++++|||++ . .+..+.+.++|++
T Consensus 332 ------f~-~~~~iRi~~~-~---~~~~~~l~~al~~ 357 (359)
T PRK03158 332 ------LG-FPTGVRITIG-L---KEQNDKIIELLKE 357 (359)
T ss_pred ------CC-CCCeEEEecC-C---HHHHHHHHHHHHH
Confidence 12 1478999999 3 3334555555544
No 92
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.96 E-value=4.2e-27 Score=238.18 Aligned_cols=248 Identities=17% Similarity=0.153 Sum_probs=186.2
Q ss_pred HHHHHHHHHHhC----C-CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC---
Q 013210 102 LNLSRQMAALEG----T-EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 102 ~~l~~~ia~l~g----~-~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 173 (447)
..+++.++++++ . +++++|+|+++|+.+++++++++||.|++.+|+|+.+...+. ..|.++..++.+
T Consensus 124 ~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~-----~~g~~~~~v~~~~~g 198 (431)
T PRK15481 124 PELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLR-----YAGFSASPVSVDAEG 198 (431)
T ss_pred HHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHH-----HcCCeEEeeccCCCC
Confidence 468888888865 2 479999999999999999999999999999999999988773 367777777654
Q ss_pred -CHHHHHHhhccCCceEEEEE-cCCCCCccccCHH---HHHHHHHhc-CCEEEEeCCCCCCCCC----cc--CCCCeEEE
Q 013210 174 -DHEMVNSAIVQGRTKVLYFE-SISNPTLAVANIP---ELSRLAHDK-GVTVVVDNTFSPLVLS----PA--RLGADVVV 241 (447)
Q Consensus 174 -d~~~l~~~i~~~~t~lV~i~-~~~NptG~v~~l~---~I~~la~~~-gi~livD~~~~~~~~~----~~--~~g~di~~ 241 (447)
|+++|++++ +.++++++++ +||||||.+.+.+ +|.++|+++ ++++|+||+|..+.++ +. .....+++
T Consensus 199 ~~~~~l~~~~-~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~ 277 (431)
T PRK15481 199 MQPEKLERAL-AQGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALI 277 (431)
T ss_pred CCHHHHHHHH-hcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEE
Confidence 789999988 6678998887 9999999999865 999999999 9999999999655322 11 12467999
Q ss_pred eCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCC---cHHHHHHHHHHHHHHHHHHHH
Q 013210 242 HSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP---HLGLRMKEHCHRALIFARRMK 318 (447)
Q Consensus 242 ~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~---~l~~~~~~~~~~~~~l~~~L~ 318 (447)
.||||.++ +|.|+ ||+++++++++.+....... ....+.+.+.++..++.... ++....+.+.++++.+.+.|+
T Consensus 278 ~SfSK~~~-~GlRi-G~~i~~~~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~ 354 (431)
T PRK15481 278 RSVSKALG-PDLRL-AFVASDSATSARLRLRLNSG-TQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQ 354 (431)
T ss_pred eeeccccC-CCcee-EEEeCCHHHHHHHHHHHhcc-ccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 89999 99999999988886554411 11233344445544554322 245566778999999999999
Q ss_pred hCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccc
Q 013210 319 KLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLG 383 (447)
Q Consensus 319 ~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G 383 (447)
+.+..+..|. .|.++|+.++.. ...+.+.|... | +.+..|
T Consensus 355 ~~~~~~~~p~-------------------gg~f~~~~l~~~--~~~~~~~l~~~---g-V~v~pg 394 (431)
T PRK15481 355 QYGIAIPSPG-------------------DGLNLWLPLDTD--SQATALTLAKS---G-WLVREG 394 (431)
T ss_pred HcCCccccCC-------------------CeEEEEEECCCC--HHHHHHHHHHC---C-cEEecC
Confidence 8765543332 577999999742 34566666542 3 455544
No 93
>PRK09082 methionine aminotransferase; Validated
Probab=99.96 E-value=1.8e-27 Score=237.53 Aligned_cols=242 Identities=17% Similarity=0.160 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHhCC----C-eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC--
Q 013210 101 VLNLSRQMAALEGT----E-AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-- 173 (447)
Q Consensus 101 ~~~l~~~ia~l~g~----~-~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-- 173 (447)
.+.+.+.+.++.|. + .+++|+|+++|+.+++.+++.+||+|+++.|.|+.+...++ ..|.++..++.+
T Consensus 73 r~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~-----~~g~~~~~~~~~~~ 147 (386)
T PRK09082 73 REAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIE-----LAGGRAVRVALQPP 147 (386)
T ss_pred HHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHH-----HcCCEEEEEecCcc
Confidence 34455555556664 2 59999999999999999999999999999999999877763 257777777654
Q ss_pred ----CHHHHHHhhccCCceEEEEEcCCCCCcccc---CHHHHHHHHHhcCCEEEEeCCCCCCCCCc------cC----CC
Q 013210 174 ----DHEMVNSAIVQGRTKVLYFESISNPTLAVA---NIPELSRLAHDKGVTVVVDNTFSPLVLSP------AR----LG 236 (447)
Q Consensus 174 ----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~---~l~~I~~la~~~gi~livD~~~~~~~~~~------~~----~g 236 (447)
|++++++.+ ++++++|++++|+||||.+. ++++|.++|++||+++|+|++|..+.++. .. .+
T Consensus 148 ~~~~d~~~l~~~~-~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~ 226 (386)
T PRK09082 148 DFRVDWQRFAAAI-SPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRE 226 (386)
T ss_pred cccCCHHHHHHhc-CccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccC
Confidence 789999988 67899999999999999985 57888999999999999999996554321 11 24
Q ss_pred CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHc-cCCcHHHHHHHHHHHHHHHHH
Q 013210 237 ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSE-RIPHLGLRMKEHCHRALIFAR 315 (447)
Q Consensus 237 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~-~~~~l~~~~~~~~~~~~~l~~ 315 (447)
..+++.|+||.+|.+|.|+ ||+++++++++.+....... ....+.+.+.++...+. ..+++.+..+.++++++.+.+
T Consensus 227 ~~i~~~S~SK~~~~~G~Ri-G~iv~~~~l~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 304 (386)
T PRK09082 227 RAFVVSSFGKTYHVTGWKV-GYCVAPAALSAEFRKVHQYN-TFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRA 304 (386)
T ss_pred cEEEEeechhhccchhhhh-hhhhCCHHHHHHHHHHHhhh-cCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 6799999999999999999 99999999998887765411 12334444444444444 233355555677899999999
Q ss_pred HHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHh
Q 013210 316 RMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYL 369 (447)
Q Consensus 316 ~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~l~~~l 369 (447)
.|++.+..+..| ..|.++|+.++. ......|...|
T Consensus 305 ~L~~~~~~~~~~-------------------~g~~~~~~~~~~~~~~~~~~~~~~l 341 (386)
T PRK09082 305 ALANSRFKLLPC-------------------EGTYFQLVDYSAISDLDDVEFCQWL 341 (386)
T ss_pred HHHhCCCcccCC-------------------CeeEEEEEeccccCCCCHHHHHHHH
Confidence 998866554322 245578888762 22245666654
No 94
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.96 E-value=5e-27 Score=234.57 Aligned_cols=240 Identities=13% Similarity=0.140 Sum_probs=177.0
Q ss_pred HHHHHHHHHHh----C----CC-eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 102 LNLSRQMAALE----G----TE-AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 102 ~~l~~~ia~l~----g----~~-~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
.++++.+|+++ | .+ .+++|+|+++|+.+++++++.+||.|++..|+|+.+...+. ..|.++..++.
T Consensus 71 ~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~-----~~g~~~~~v~~ 145 (388)
T PRK07366 71 LDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVY-----LAGGQIYPMPL 145 (388)
T ss_pred HHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-----hcCCEEEEEEC
Confidence 56888888876 3 24 58999999999999999999999999999999999987763 25777777655
Q ss_pred C-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-------cCC
Q 013210 173 S-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-------ARL 235 (447)
Q Consensus 173 ~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-------~~~ 235 (447)
+ |++++++.+ .+++++|++++||||||.+.+ +++|+++|++||+++|+||+|..+.++. ..+
T Consensus 146 ~~~~~~~~d~~~l~~~~-~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~ 224 (388)
T PRK07366 146 RAENDFLPVFADIPTEV-LAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQA 224 (388)
T ss_pred CCccCCCCCHHHHHHhh-cccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhC
Confidence 3 567787766 567999999999999999987 5577889999999999999996654321 111
Q ss_pred ----CCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCc-cHHHHHHHHcc-CCcHHHHHHHHHHH
Q 013210 236 ----GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTM-NPKVAFELSER-IPHLGLRMKEHCHR 309 (447)
Q Consensus 236 ----g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~a~~~~~~-~~~l~~~~~~~~~~ 309 (447)
...+++.||||.+|.+|.|+ ||+++++++++.+...+... ..+... .+.++...+.. .+++....+.+.++
T Consensus 225 ~~~~~~vi~~~SfSK~~g~~GlRi-G~~v~~~~li~~l~~~~~~~--~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~ 301 (388)
T PRK07366 225 DPEKSVSIEFFTLSKSYNMGGFRI-GFAIGNAQLIQALRQVKAVV--DFNQYRGILNGAIAALTGPQATVQQTVQIFRQR 301 (388)
T ss_pred CCCcccEEEEeecccccCCcchhh-eehcCCHHHHHHHHHHHhhc--ccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 24588999999999999999 99999999999888766521 111111 12333333322 23455666778899
Q ss_pred HHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHh
Q 013210 310 ALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYL 369 (447)
Q Consensus 310 ~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~l~~~l 369 (447)
++.+.+.|++++..+..|. .|.++|+.++.. .....+.+.+
T Consensus 302 r~~l~~~L~~~~~~~~~p~-------------------~g~f~~~~~~~~~~~~~~~~~~~l 344 (388)
T PRK07366 302 RDAFINALHQIGWPVPLPE-------------------ATMYVWAKLPEPWQGNSVEFCTQL 344 (388)
T ss_pred HHHHHHHHHHCCCcccCCC-------------------eeEEEEEECCcccCCCHHHHHHHH
Confidence 9999999988765443332 567899998742 1234565555
No 95
>PRK08068 transaminase; Reviewed
Probab=99.96 E-value=4.3e-27 Score=235.06 Aligned_cols=282 Identities=15% Similarity=0.149 Sum_probs=201.1
Q ss_pred HHHHHHHHHHHh----C----CC-eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 101 VLNLSRQMAALE----G----TE-AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 101 ~~~l~~~ia~l~----g----~~-~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
..+|++.+|+++ | .+ .+++|+|+++++..++.+++++||.|+++.|+|+.+...+. ..|.++..++
T Consensus 72 ~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~-----~~g~~~~~i~ 146 (389)
T PRK08068 72 YPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVA-----LARAQFETMP 146 (389)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-----hcCCEEEEee
Confidence 467888898886 4 24 68999999999999999999999999999999998887763 2577777766
Q ss_pred CC-------CHHHHHHhhccCCceEEEEEcCCCCCccccCH---HHHHHHHHhcCCEEEEeCCCCCCCCCc------cC-
Q 013210 172 IS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVANI---PELSRLAHDKGVTVVVDNTFSPLVLSP------AR- 234 (447)
Q Consensus 172 ~~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l---~~I~~la~~~gi~livD~~~~~~~~~~------~~- 234 (447)
.+ |++++++++ ++++++|++++||||||.+.+. ++|+++|+++++++|+||+|..+.++. ..
T Consensus 147 ~~~~~~~~~d~~~l~~~~-~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~ 225 (389)
T PRK08068 147 LIAENNFLPDYTKIPEEV-AEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQT 225 (389)
T ss_pred cccccCCCCCHHHHHHhc-cccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhC
Confidence 53 678898888 6789999999999999999975 577888999999999999996553321 11
Q ss_pred ---CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCC-ccHHHHHHHHc-cCCcHHHHHHHHHHH
Q 013210 235 ---LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPT-MNPKVAFELSE-RIPHLGLRMKEHCHR 309 (447)
Q Consensus 235 ---~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~-~~~~~a~~~~~-~~~~l~~~~~~~~~~ 309 (447)
.+..+++.|+||.+|.+|.|+ ||+++++++++.+....... ..+.. ..+.++...+. ..+++....+++.++
T Consensus 226 ~~~~~~~i~~~S~SK~~g~~GlRi-G~~~~~~~l~~~l~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 302 (389)
T PRK08068 226 PGAKDVGIELYTLSKTFNMAGWRV-AFAVGNESVIEAINLLQDHL--FVSLFGAIQDAAIEALLSDQSCVAELVARYESR 302 (389)
T ss_pred CCccCCEEEEecchhccCCcccee-EeEecCHHHHHHHHHHHhhc--cCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 135689999999999999999 99999999999887765521 11211 22333333332 224455667778999
Q ss_pred HHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccc
Q 013210 310 ALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLM 389 (447)
Q Consensus 310 ~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~ 389 (447)
++.+.+.|++++..+..|. .|.++++.+++..+...+.+.|... .| +.+..|....
T Consensus 303 r~~~~~~L~~~g~~~~~~~-------------------g~~~~~v~~~~~~~~~~~~~~l~~~--~g-i~v~pg~~f~-- 358 (389)
T PRK08068 303 RNAFISACREIGWEVDAPK-------------------GSFFAWMPVPKGYTSEQFADLLLEK--AH-VAVAPGNGFG-- 358 (389)
T ss_pred HHHHHHHHHHCCCcccCCC-------------------eeEEEEEECCCCCCHHHHHHHHHHh--CC-EEEecchHhC--
Confidence 9999999988765543222 3446799987432356677776531 23 3444441110
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 390 SCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 390 ~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
...++++|||++ ..+ +.+.++++++.
T Consensus 359 -------------------~~~~~~iRi~~~-~~~-----~~l~~al~~l~ 384 (389)
T PRK08068 359 -------------------EHGEGYVRVGLL-TDE-----ERLREAVERIG 384 (389)
T ss_pred -------------------ccCCCeEEEEEc-CCH-----HHHHHHHHHHH
Confidence 012478999999 532 35666666554
No 96
>PLN02187 rooty/superroot1
Probab=99.96 E-value=8.1e-27 Score=236.81 Aligned_cols=216 Identities=16% Similarity=0.165 Sum_probs=162.5
Q ss_pred hHHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 100 TVLNLSRQMAALEG--------TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 100 ~~~~l~~~ia~l~g--------~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
....+|+.+|++++ .+++++|+|+++|+.+++.+++++||.|+++.|+|+.+...+. ..|.++..++
T Consensus 109 G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~-----~~g~~~~~~~ 183 (462)
T PLN02187 109 GILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAA-----YSGLEVRKFD 183 (462)
T ss_pred ChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHH-----HcCCEEEEEe
Confidence 35678999999873 3569999999999999999999999999999999999876652 2577777765
Q ss_pred C---C----CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------cCC
Q 013210 172 I---S----DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------ARL 235 (447)
Q Consensus 172 ~---~----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~~~ 235 (447)
. + |+++|++++ ++++++|++++||||||.+.+ +++|+++|++||+++|+||+|..+.+.. ..+
T Consensus 184 l~~~~~~~~d~~~l~~~~-~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~ 262 (462)
T PLN02187 184 LLPEKEWEIDLEGIEAIA-DENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKF 262 (462)
T ss_pred CccccCCccCHHHHHHhc-CCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHh
Confidence 4 1 789999988 778999999999999999987 7788999999999999999997655421 111
Q ss_pred ---CCeEEEeCCCccccCCCCeeEEEEEcC-h-HH---HHHHHHHhhhhhhhcC-CCccHHHHHHHHcc--CCcHHHHHH
Q 013210 236 ---GADVVVHSISKFISGGADIIAGAVCGP-A-NL---VNSMMDLHQGALMLLG-PTMNPKVAFELSER--IPHLGLRMK 304 (447)
Q Consensus 236 ---g~di~~~S~sK~~g~~g~~igG~l~~~-~-~~---~~~l~~~~~~~~~~~g-~~~~~~~a~~~~~~--~~~l~~~~~ 304 (447)
...+++.|+||.|+.+|+|+ ||++++ + .+ ++.+...+.......+ +.+.+.++..++.. .+++....+
T Consensus 263 ~~~~~vi~l~SfSK~f~~pGlRi-G~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~ 341 (462)
T PLN02187 263 ASIVPVLTLAGISKGWVVPGWKI-GWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNK 341 (462)
T ss_pred ccCCcEEEEecchhhcCCcccee-EEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 24789999999999999999 999873 3 33 3455444442211112 33444444444432 234566677
Q ss_pred HHHHHHHHHHHHHHhCCC
Q 013210 305 EHCHRALIFARRMKKLGL 322 (447)
Q Consensus 305 ~~~~~~~~l~~~L~~~~~ 322 (447)
.+.++++.+.+.|++++.
T Consensus 342 ~l~~~r~~l~~~L~~~~~ 359 (462)
T PLN02187 342 ILKHNVDLVCDRLKDIPC 359 (462)
T ss_pred HHHHHHHHHHHHHhhCCC
Confidence 788999999999988654
No 97
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.96 E-value=4.4e-27 Score=234.76 Aligned_cols=243 Identities=17% Similarity=0.170 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHh----C----CC-eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 101 VLNLSRQMAALE----G----TE-AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 101 ~~~l~~~ia~l~----g----~~-~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
..++++.+|+++ | .+ .+++|+|+++++..++..++++||+|++++|+|+.+...+. ..|.++..++
T Consensus 71 ~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~-----~~g~~~~~v~ 145 (385)
T PRK09276 71 MLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTI-----FAGGEPYFMP 145 (385)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHH-----HcCCEEEEEe
Confidence 356888888876 3 23 38889999999999999999999999999999998877663 2577777665
Q ss_pred CC-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC------ccC-
Q 013210 172 IS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS------PAR- 234 (447)
Q Consensus 172 ~~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~------~~~- 234 (447)
.+ |++++++.+ .+++++|++++|+||||.+.+ +++|+++|++||+++|+|++|..+.++ ...
T Consensus 146 ~~~~~g~~~d~~~l~~~~-~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 224 (385)
T PRK09276 146 LKEENGFLPDLDAIPEDV-AKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEV 224 (385)
T ss_pred cCCCCCCcCCHHHHHHhc-cccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhcc
Confidence 42 678888887 678999999999999999997 578889999999999999999655332 111
Q ss_pred ---CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC-CcHHHHHHHHHHHH
Q 013210 235 ---LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKEHCHRA 310 (447)
Q Consensus 235 ---~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~~~~~~ 310 (447)
.+.++++.|+||.+|.+|.|+ ||+++++++++.+...+... ....+.+.+.++...+... .++....+++.+++
T Consensus 225 ~~~~~~~i~~~S~SK~~g~~GlRi-G~~i~~~~l~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 302 (385)
T PRK09276 225 PGAKDVGIEFHSLSKTYNMTGWRI-GFAVGNADLIAGLGKVKSNV-DSGVFQAIQEAGIAALNGPQEVVEELRKIYQERR 302 (385)
T ss_pred CCCcCCEEEEecchhhcCCcchhh-eeeeCCHHHHHHHHHHHhhc-cCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 245789999999999999999 99999999999887765411 1111222333333444332 33455556678889
Q ss_pred HHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhh
Q 013210 311 LIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQ 370 (447)
Q Consensus 311 ~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~ 370 (447)
+.+.+.|++.+.++..|. .|.++++.++...+...+...|.
T Consensus 303 ~~l~~~L~~~~~~~~~~~-------------------~~~~~~v~~~~~~~~~~l~~~ll 343 (385)
T PRK09276 303 DILVEGLRKLGLEVEPPK-------------------ATFYVWAPVPKGYTSAEFATLLL 343 (385)
T ss_pred HHHHHHHHhCCCcccCCC-------------------cceEEEEECCCCCCHHHHHHHHH
Confidence 999999988765544332 34568898874323455666653
No 98
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.96 E-value=1.2e-26 Score=228.59 Aligned_cols=242 Identities=19% Similarity=0.178 Sum_probs=182.2
Q ss_pred HHHHHHHHHHh----C----CC-eEEEeCChHHHHHHHHHHhcCCC---CeEEEeCCCchhHHHHHHhhcCcccCeeEEE
Q 013210 102 LNLSRQMAALE----G----TE-AAYCTASGMSAISSVLMQLCSSG---GHVVAARTLYGGTHALLTHFFPRACNITTTF 169 (447)
Q Consensus 102 ~~l~~~ia~l~----g----~~-~~~~tsggt~A~~~al~~l~~~g---d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~ 169 (447)
..+++.+++++ | .+ ++++|+|+++|+..++..++++| |.|+++.|.|+.+...+. ..|.++..
T Consensus 39 ~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~-----~~g~~~~~ 113 (350)
T TIGR03537 39 KALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGAL-----FAGGEPTA 113 (350)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHHHH-----hcCCEEEE
Confidence 56778888775 4 34 79999999999999999998877 699999999999988773 36778877
Q ss_pred eCCC-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC-----cc-
Q 013210 170 VDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS-----PA- 233 (447)
Q Consensus 170 v~~~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~-----~~- 233 (447)
++.+ |++++++++ ++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+.+. ..
T Consensus 114 v~~~~~~~~~~d~~~l~~~~-~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 192 (350)
T TIGR03537 114 VKLKKEDGFLLRLEKVEKSI-LEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALE 192 (350)
T ss_pred cccCcccCCccCHHHHHHhh-hhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhh
Confidence 7652 789999988 678999999999999999998 889999999999999999999654322 11
Q ss_pred -CCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCC-ccHHHHHHHHccCCcHHHHHHHHHHHHH
Q 013210 234 -RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPT-MNPKVAFELSERIPHLGLRMKEHCHRAL 311 (447)
Q Consensus 234 -~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~-~~~~~a~~~~~~~~~l~~~~~~~~~~~~ 311 (447)
..+..+++.|+||.+|.+|.|+ ||+++++++++.+...+... ..+.+ ..+.++...+....++..+.++++++++
T Consensus 193 ~~~~~~i~~~s~SK~~g~~GlRi-G~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~ 269 (350)
T TIGR03537 193 VGIENVLAFHSLSKRSGMTGYRS-GFVAGDEKLISFLRKLRANF--GVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRD 269 (350)
T ss_pred cCcCCEEEEeecccccCCccccc-eeeecCHHHHHHHHHHHHhh--ccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 2245799999999999999998 99999999998888765521 11221 2233333344333445566677888899
Q ss_pred HHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 312 IFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 312 ~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
.+.+.|++.+.++..|. .|.++++.++.......+.+.|..
T Consensus 270 ~~~~~l~~~g~~~~~~~-------------------g~~~~~~~~~~~~~~~~l~~~L~~ 310 (350)
T TIGR03537 270 LFIEFFNKVGLEYLYPD-------------------ATFYLWVKVPSGIDAKDYALRLLE 310 (350)
T ss_pred HHHHHHHHCCCcccCCC-------------------eEEEEEEECCCCCCHHHHHHHHHH
Confidence 99999988765444322 345788988753335677777765
No 99
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.96 E-value=2.8e-27 Score=235.48 Aligned_cols=303 Identities=17% Similarity=0.218 Sum_probs=210.6
Q ss_pred chHHHHHHHHHHHhCCC---eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC--
Q 013210 99 PTVLNLSRQMAALEGTE---AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-- 173 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~---~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-- 173 (447)
+...++++.+++++|++ .+++|+|+++++++++.+++++||+|+++.++|+++...+...... .|.+++.++.+
T Consensus 44 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~-~g~~~~~v~~~~~ 122 (376)
T TIGR01977 44 REVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQ-IGVEITIVKCDNE 122 (376)
T ss_pred HHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHH-cCcEEEEEecCCC
Confidence 66789999999999974 5899999999999999998899999999999999887666444433 58888887654
Q ss_pred ---CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccc
Q 013210 174 ---DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFI 248 (447)
Q Consensus 174 ---d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~ 248 (447)
|++++++++ ++++++|++++++||||.+.|+++|.++|+++|+++|+|+++ +...++....++|+++.|+||++
T Consensus 123 ~~~d~~~l~~~~-~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l 201 (376)
T TIGR01977 123 GLISPERIKRAI-KTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGL 201 (376)
T ss_pred CCcCHHHHHHhc-CCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEecccccc
Confidence 799999999 778999999999999999999999999999999999999999 33455666678999999999998
Q ss_pred cCCCCeeEEEEEcChHHHHHHHHHh----hhh---------hhhcCCCccH-HHHH-HHHccC--CcHHHHHHHHHHHHH
Q 013210 249 SGGADIIAGAVCGPANLVNSMMDLH----QGA---------LMLLGPTMNP-KVAF-ELSERI--PHLGLRMKEHCHRAL 311 (447)
Q Consensus 249 g~~g~~igG~l~~~~~~~~~l~~~~----~~~---------~~~~g~~~~~-~~a~-~~~~~~--~~l~~~~~~~~~~~~ 311 (447)
++|.. .|++++.++..+..+.... ... ....|+...+ ..+. .++..+ .......++..++++
T Consensus 202 ~~p~g-~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~ 280 (376)
T TIGR01977 202 LGPQG-TGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTE 280 (376)
T ss_pred cCCCC-ceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 76543 4344455443222111100 000 0011211111 1111 112111 123345566788888
Q ss_pred HHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCcccccc
Q 013210 312 IFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMS 390 (447)
Q Consensus 312 ~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~ 390 (447)
++.+.|++.+. ++..|..+. ..+++++|.+++.. ...+.+.|... +| +.++.|..++...
T Consensus 281 ~~~~~l~~~~~~~~~~~~~~~---------------~~~~~v~~~~~~~~-~~~~~~~L~~~--~g-i~v~~g~~~~~~~ 341 (376)
T TIGR01977 281 KLLNGLREINKVKIYGPADPA---------------NRVGVVSFTVEGID-SEEVADILDEK--FD-IATRTGLHCAPLA 341 (376)
T ss_pred HHHHHHhcCCCeEEeCCCCcc---------------ccCCeEEEEECCCC-HHHHHHHHhcc--CC-EEEEcccccchHH
Confidence 99999987654 555442111 13558999987543 56677777652 24 5667675543322
Q ss_pred ccccccCCCCCHHHHHhcCC-CCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 391 CSGSSTSSELNAEEKALAGI-SAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 391 ~~a~~~~~~~~~~~~~~~g~-~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
+ ..+|. ..+.||+|++ ..+++++++.+.++|++
T Consensus 342 ~--------------~~~g~~~~~~iRis~~-~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 342 H--------------KTIGTFATGTIRLSLG-YFNTEEEIEKLLEALSE 375 (376)
T ss_pred H--------------HHhCCCCCCeEEEecC-CCCCHHHHHHHHHHHhh
Confidence 1 11222 3578999999 99999999999999875
No 100
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=6.7e-27 Score=231.79 Aligned_cols=283 Identities=14% Similarity=0.123 Sum_probs=199.6
Q ss_pred HHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC----C
Q 013210 101 VLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS----D 174 (447)
Q Consensus 101 ~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~----d 174 (447)
...+|+.||++++. +.+++|+|+++++..++..++++||.|++..|+|+.+...+. ..|.++..++.+ |
T Consensus 69 ~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~-----~~g~~~~~vp~~~~~~~ 143 (369)
T PRK08153 69 NHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHVA-----GFGGRLVTVPYRDDRED 143 (369)
T ss_pred cHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCcchHHHHHHH-----HcCCeEEEeeCCCCCCC
Confidence 56899999999986 459999999999999999989999999999999998876653 246666666543 7
Q ss_pred HHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHh--cCCEEEEeCCCCCCCCCc--c----CCCCeEEEeCCCc
Q 013210 175 HEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD--KGVTVVVDNTFSPLVLSP--A----RLGADVVVHSISK 246 (447)
Q Consensus 175 ~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~--~gi~livD~~~~~~~~~~--~----~~g~di~~~S~sK 246 (447)
++++++.+.++++++|++++|+||||.+.+.+++.++++. +++++|+||+|..+.... . .....+++.||||
T Consensus 144 ~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK 223 (369)
T PRK08153 144 LDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSK 223 (369)
T ss_pred HHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchH
Confidence 7888776645689999999999999999998877777764 389999999996554321 1 1235689999999
Q ss_pred cccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeC
Q 013210 247 FISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLY 326 (447)
Q Consensus 247 ~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~ 326 (447)
.+|.+|.|+ ||+++++++++.+...+.. ...+.+.+.++..++...+.+....+.+.++++.+.+.|++.+..+.
T Consensus 224 ~~g~~GlRi-G~~v~~~~~~~~l~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~- 298 (369)
T PRK08153 224 AYGLAGARV-GYAIGAPGTIKAFDKVRNH---FGMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARANGLTPL- 298 (369)
T ss_pred hccCcchhe-eeeecCHHHHHHHHHhhcC---CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCccC-
Confidence 999999999 9999999999888766541 23333444444444443233445556678888889998987765322
Q ss_pred CCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHH
Q 013210 327 PGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEK 405 (447)
Q Consensus 327 p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~ 405 (447)
|. .|.++++.++ +...+..+.++|... | +.+.. |..
T Consensus 299 p~-------------------~~~f~~~~~~~~~~~a~~l~~~l~~~---G-i~v~~---------p~~----------- 335 (369)
T PRK08153 299 PS-------------------ATNFVAIDCGRDGAFARAVLDGLIAR---D-IFVRM---------PGV----------- 335 (369)
T ss_pred CC-------------------cCcEEEEECCCCcccHHHHHHHHHHC---C-eEEee---------CCC-----------
Confidence 22 3558888875 233466777777652 3 33311 110
Q ss_pred HhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 406 ALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 406 ~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+..++++|||++..++.+.+++.|.+.++.+
T Consensus 336 ---~~~~~~iRis~~~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 336 ---APLDRCIRVSCGPDEELDLFAEALPEALEAA 366 (369)
T ss_pred ---CCCCCeEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 0124689999993244444555555544433
No 101
>PRK09105 putative aminotransferase; Provisional
Probab=99.96 E-value=6.3e-27 Score=231.80 Aligned_cols=275 Identities=17% Similarity=0.206 Sum_probs=196.7
Q ss_pred chHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC---
Q 013210 99 PTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 173 (447)
+...++++.||+.+|. +++++|+|+++++..++.+++++||+|++++|+|+.+...+. ..|.++..++.+
T Consensus 78 ~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~~~~-----~~g~~~~~v~~~~~~ 152 (370)
T PRK09105 78 ELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAAD-----AQGAPVAKVPLRADG 152 (370)
T ss_pred chHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHH-----HcCCeEEEecCCCCC
Confidence 3467899999999875 559999999999999999999999999999999999877663 267777777653
Q ss_pred --CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHh--cCCEEEEeCCCCCCCCCc--cC----CCCeEEEeC
Q 013210 174 --DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD--KGVTVVVDNTFSPLVLSP--AR----LGADVVVHS 243 (447)
Q Consensus 174 --d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~--~gi~livD~~~~~~~~~~--~~----~g~di~~~S 243 (447)
|++++++. .+++++|++++||||||.+.+.++|.++++. +++++|+||+|..+...+ .. ....+++.|
T Consensus 153 ~~d~~~l~~~--~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~S 230 (370)
T PRK09105 153 AHDVKAMLAA--DPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRT 230 (370)
T ss_pred CCCHHHHHhc--CCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEec
Confidence 67888765 3568999999999999999998888887754 489999999994443221 11 235688999
Q ss_pred CCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCe
Q 013210 244 ISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLK 323 (447)
Q Consensus 244 ~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~ 323 (447)
+||.+|++|+|+ ||+++++++++.+..... ...+...+.++..++...+++....+++.++++.+.+.|++.+..
T Consensus 231 fSK~~g~~GlRi-G~~v~~~~~i~~l~~~~~----~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~ 305 (370)
T PRK09105 231 FSKLYGMAGMRL-GLAAARPDLLAKLARFGH----NPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKKGYK 305 (370)
T ss_pred ccHhhcCCccce-eeeecCHHHHHHHHhcCC----CCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 999999999999 999999999988876521 222333333444444443445556677889999999999987654
Q ss_pred eeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHH
Q 013210 324 VLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAE 403 (447)
Q Consensus 324 v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~ 403 (447)
+..| .|+++.+.++. +...+.+.|... | +.+ |.. +
T Consensus 306 ~~~~--------------------~~~f~~~~~~~--~~~~l~~~L~~~---g-I~v--~~~--------~--------- 340 (370)
T PRK09105 306 CTPS--------------------QANCFMVDVKR--PAKAVADAMAKQ---G-VFI--GRS--------W--------- 340 (370)
T ss_pred cCCC--------------------CCcEEEEeCCC--CHHHHHHHHHHC---C-cEE--ecC--------C---------
Confidence 4322 24466676652 235666666642 2 333 311 0
Q ss_pred HHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 404 EKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 404 ~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+..++++|||++ . ++.++.|.++|+.+
T Consensus 341 -----~~~~~~~Ris~~-~---~~~~~~l~~al~~~ 367 (370)
T PRK09105 341 -----PIWPNWVRVTVG-S---EEEMAAFRSAFAKV 367 (370)
T ss_pred -----CCCCCeEEEEcC-C---HHHHHHHHHHHHHH
Confidence 011478999999 4 34456666666654
No 102
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.96 E-value=8.7e-27 Score=229.30 Aligned_cols=277 Identities=18% Similarity=0.231 Sum_probs=203.3
Q ss_pred CchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC--
Q 013210 98 NPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-- 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-- 173 (447)
.+...++|+.+|+++++ +++++|+|+++++.+++++++++||+|+++.|+|+.+...+. ..|.++..++.+
T Consensus 53 ~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~-----~~g~~~~~~~~~~~ 127 (346)
T TIGR01141 53 DPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYEISAK-----IHGAEVVKVPLDED 127 (346)
T ss_pred CCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHH-----HcCCeEEEeccCCC
Confidence 34457899999999985 459999999999999999998999999999999987665442 257788777653
Q ss_pred ---CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhc--CCEEEEeCCCCCCCCC--cc----CCCCeEEEe
Q 013210 174 ---DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK--GVTVVVDNTFSPLVLS--PA----RLGADVVVH 242 (447)
Q Consensus 174 ---d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~--gi~livD~~~~~~~~~--~~----~~g~di~~~ 242 (447)
|++++++++ ++++++|++++|+||||.+.|++++.++|+.+ |+++|+|++|..+... +. ..+.++++.
T Consensus 128 ~~~d~~~l~~~~-~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~ 206 (346)
T TIGR01141 128 GQLDLEDILVAI-DDKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLR 206 (346)
T ss_pred CCCCHHHHHHhc-CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEe
Confidence 889999987 77899999999999999999999999999877 9999999998654332 11 124568899
Q ss_pred CCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhC-C
Q 013210 243 SISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKL-G 321 (447)
Q Consensus 243 S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~ 321 (447)
|+||++|.+|.|+ ||++.++++++.+...... ...+.+++.++...+....++....+++.++++++.+.|+++ +
T Consensus 207 S~sK~~g~~G~r~-G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 282 (346)
T TIGR01141 207 TLSKAFGLAGLRI-GYAIANAEIIDALNKVRAP---FNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPG 282 (346)
T ss_pred hhhHhhhchhhhc-eeeecCHHHHHHHHhccCC---CCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999899998 9999999998888765441 222333444444444333335556677888999999999887 4
Q ss_pred CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCC
Q 013210 322 LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELN 401 (447)
Q Consensus 322 ~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~ 401 (447)
.++ .|. .|.++++.++. ..+.+.+.|... | +.+..|...
T Consensus 283 ~~~-~~~-------------------~g~~~~~~~~~--~~~~~~~~L~~~---g-I~v~~g~~f--------------- 321 (346)
T TIGR01141 283 LEV-YPS-------------------DANFVLIRFPR--DADALFEALLEK---G-IIVRDLNSY--------------- 321 (346)
T ss_pred CEE-CCC-------------------cCCEEEEecCC--CHHHHHHHHHHC---C-eEEEeCCCc---------------
Confidence 443 222 35689999875 356777777753 3 455544210
Q ss_pred HHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013210 402 AEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 436 (447)
Q Consensus 402 ~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 436 (447)
.+. ++.+|+|++ . ++.++.+.++|
T Consensus 322 ------~~~-~~~iRls~~-~---~~~i~~~~~~l 345 (346)
T TIGR01141 322 ------PGL-PNCLRITVG-T---REENDRFLAAL 345 (346)
T ss_pred ------CCC-CCeEEEecC-C---HHHHHHHHHHh
Confidence 012 578999999 3 44566665554
No 103
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2e-26 Score=229.58 Aligned_cols=287 Identities=18% Similarity=0.240 Sum_probs=198.3
Q ss_pred HHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC------
Q 013210 101 VLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI------ 172 (447)
Q Consensus 101 ~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~------ 172 (447)
..++++.+|+++|.+ ++++|+|+++|+..++++++.+||+|++++|.|..+...+. . .|.++..++.
T Consensus 68 ~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~----~-~g~~~~~v~~~~~~~~ 142 (380)
T PRK06225 68 FPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFAS----R-FGAEVIEVPIYSEECN 142 (380)
T ss_pred hHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----H-hCceEEeeccccccCC
Confidence 578999999999864 59999999999999999999999999999999987765552 2 5777776653
Q ss_pred --CCHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC---cc--CCCCeEEEe
Q 013210 173 --SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS---PA--RLGADVVVH 242 (447)
Q Consensus 173 --~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~---~~--~~g~di~~~ 242 (447)
.|++++++.+ ++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..+... .. ....++++.
T Consensus 143 ~~~d~~~l~~~~-~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~ 221 (380)
T PRK06225 143 YKLTPELVKENM-DENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSY 221 (380)
T ss_pred ccCCHHHHHhhc-CCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEe
Confidence 2788999988 778999999999999999875 889999999999999999998433211 11 124678899
Q ss_pred CCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHH-HHHHHHHHHHHHHHHhCC
Q 013210 243 SISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRM-KEHCHRALIFARRMKKLG 321 (447)
Q Consensus 243 S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~-~~~~~~~~~l~~~L~~~~ 321 (447)
|+||++|++|.|+ ||+++++++++.+...... ....+.+.+.++...+.....+.+++ +.++++++.+.+.|++++
T Consensus 222 s~SK~~g~~G~Ri-G~i~~~~~l~~~~~~~~~~--~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 298 (380)
T PRK06225 222 SFSKIFGMAGLRI-GAVVATPDLIEVVKSIVIN--DLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIE 298 (380)
T ss_pred echhhcCCcccee-EEEecCHHHHHHHHHHHhc--ccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999998 9999999998888765431 12223333333333333322332333 345666777888888752
Q ss_pred -Ceee-CCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHhhcccccccccccccCccccccccccccCC
Q 013210 322 -LKVL-YPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSS 398 (447)
Q Consensus 322 -~~v~-~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~ 398 (447)
..+. .| ..|+++++.++. ......+.+.|.. .| +.+..|..+ .
T Consensus 299 ~~~~~~~~-------------------~~g~~~~~~~~~~~~~~~~l~~~l~~---~g-i~v~~g~~~--------~--- 344 (380)
T PRK06225 299 GVFLPVYP-------------------SHGNMMVIDISEAGIDPEDLVEYLLE---RK-IFVRQGTYT--------S--- 344 (380)
T ss_pred CCccccCC-------------------CCCeEEEEEcccccCCHHHHHHHHHH---CC-EEEcCCccc--------C---
Confidence 2221 12 246688888853 2235667777764 23 344444211 0
Q ss_pred CCCHHHHHhcCCCCCeEEEEeCCC--CCHHHHHHHHHHHHHHhh
Q 013210 399 ELNAEEKALAGISAGLVRMSVGYL--GTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 399 ~~~~~~~~~~g~~~~~iRiS~g~~--~~~~~~i~~l~~al~~~~ 440 (447)
....++.+|+|++ . ++.++.++.|.+++++++
T Consensus 345 ---------~~~~~~~iR~s~~-~~~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 345 ---------KRFGDRYIRVSFS-IPREQVEVFCEEFPDVVETLR 378 (380)
T ss_pred ---------cCCCCceEEEEeC-CCHHHHHHHHHHHHHHHHHhh
Confidence 0112468999999 6 345555566666665554
No 104
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.1e-26 Score=230.38 Aligned_cols=282 Identities=17% Similarity=0.171 Sum_probs=197.3
Q ss_pred HHHHHHHHHHh----C----CC-eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 102 LNLSRQMAALE----G----TE-AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 102 ~~l~~~ia~l~----g----~~-~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
.++++.+|+++ | .+ .+++|+|+++|+..++.+++++||+|+++.|+|+.+...+. ..|.++..++.
T Consensus 76 ~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~-----~~g~~~~~v~~ 150 (394)
T PRK05942 76 ASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPL-----IAGAQIYPIIL 150 (394)
T ss_pred HHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-----HcCCEEEEeec
Confidence 56888888876 3 34 38889999999999999999999999999999999876652 25777777654
Q ss_pred C-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------cC--
Q 013210 173 S-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------AR-- 234 (447)
Q Consensus 173 ~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~~-- 234 (447)
+ |++++++.+ .+++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..+.++. ..
T Consensus 151 ~~~~~~~~d~~~l~~~~-~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~ 229 (394)
T PRK05942 151 KPENDWLIDLSSIPEEV-AQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIP 229 (394)
T ss_pred CCccCCccCHHHHHHhc-cccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCC
Confidence 2 688998888 678999999999999999997 7788999999999999999986554321 11
Q ss_pred --CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCC-cHHHHHHHHHHHHH
Q 013210 235 --LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP-HLGLRMKEHCHRAL 311 (447)
Q Consensus 235 --~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~-~l~~~~~~~~~~~~ 311 (447)
.+..+++.||||.+|.+|.|+ ||++.++++++.+....... ....+...+.++..++...+ .+....+++.++++
T Consensus 230 ~~~~~~i~~~SfSK~~~~~GlRi-G~i~~~~~l~~~l~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 307 (394)
T PRK05942 230 GAKDIGVEFHTLSKTYNMAGWRV-GFVVGNRHIIQGLRTLKTNL-DYGIFSALQKAAETALQLPDSYLQQVQERYRTRRD 307 (394)
T ss_pred CccccEEEEecchhccCChhhhe-eeeecCHHHHHHHHHHHhhc-ccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 135688999999999999999 99999999999888765411 11223333444444443322 34455666788889
Q ss_pred HHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHH-hhcccccccccccccCcccccc
Q 013210 312 IFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNY-LQNYAQFGFMAVSLGYYETLMS 390 (447)
Q Consensus 312 ~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~-l~~~~~~g~~~vs~G~~~s~~~ 390 (447)
.+.+.|++.+..+..|. .|.++|+.++.......+... +.. .| +.+..|...
T Consensus 308 ~~~~~L~~~~~~~~~~~-------------------~~~f~~~~~~~~~~~~~~~~~~l~~---~g-V~v~~g~~f---- 360 (394)
T PRK05942 308 FLIQGLGELGWNIPPTK-------------------ATMYLWVPCPVGMGSTDFALNVLQK---TG-VVVTPGNAF---- 360 (394)
T ss_pred HHHHHHHHCCCeecCCC-------------------eeeEEEEECCCCCCHHHHHHHHHHH---CC-EEEeCChhh----
Confidence 99999988765543221 345888988732223344443 333 23 344434211
Q ss_pred ccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013210 391 CSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 391 ~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 441 (447)
. ....+++|||++ .+ .+.|.++|+++.+
T Consensus 361 ----~-------------~~~~~~iRis~~-~~-----~~~l~~~l~~l~~ 388 (394)
T PRK05942 361 ----G-------------EGGEGYVRISLI-AD-----CDRLGEALDRLKQ 388 (394)
T ss_pred ----C-------------cCCCCeEEEEec-CC-----HHHHHHHHHHHHH
Confidence 0 012478999999 43 3456666666553
No 105
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=3.7e-27 Score=232.06 Aligned_cols=281 Identities=15% Similarity=0.189 Sum_probs=202.3
Q ss_pred ccCCCCchHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhcCCC-CeEEEeCCCchhHHHHHHhhcCcccCeeEEE
Q 013210 93 YSRHFNPTVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLCSSG-GHVVAARTLYGGTHALLTHFFPRACNITTTF 169 (447)
Q Consensus 93 ~~r~~~~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~ 169 (447)
..++..+....+++.+|+.+|.+ .+++|+|+++++.+++++++++| |+|+++.|+|+.+...++ ..|.++..
T Consensus 51 ~~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~-----~~G~~~~~ 125 (351)
T PRK01688 51 LNRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAE-----TIGVEIRT 125 (351)
T ss_pred cccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHH-----HcCCEEEE
Confidence 34456666689999999999864 49999999999999999998887 899999999998876652 26778777
Q ss_pred eCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHh--cCCEEEEeCCCCCCCCCc------cCCC
Q 013210 170 VDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD--KGVTVVVDNTFSPLVLSP------ARLG 236 (447)
Q Consensus 170 v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~--~gi~livD~~~~~~~~~~------~~~g 236 (447)
++.+ |++++++++ . ++++|++++||||||.+.+.++|.++++. .++++|+||+|..+.... ...+
T Consensus 126 v~~~~~~~~d~~~l~~~~-~-~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~ 203 (351)
T PRK01688 126 VPTLDNWQLDLPAIADNL-D-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYP 203 (351)
T ss_pred eecCCCCCCCHHHHHHhc-c-CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCC
Confidence 7653 788998877 3 79999999999999999987777777653 268999999996654221 1235
Q ss_pred CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHcc--CCcHHHHHHHHHHHHHHHH
Q 013210 237 ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER--IPHLGLRMKEHCHRALIFA 314 (447)
Q Consensus 237 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~--~~~l~~~~~~~~~~~~~l~ 314 (447)
..+++.||||.||.+|.|+ ||+++++++++.+.+.+.. ...+.+.+.+|..++.. .+.+.++.+.+.++++++.
T Consensus 204 n~iv~rSfSK~~glaGlRi-Gy~i~~~~~i~~l~~~~~~---~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~ 279 (351)
T PRK01688 204 HLVILRTLSKAFALAGLRC-GFTLANEEVINLLLKVIAP---YPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLI 279 (351)
T ss_pred CEEEEecchHhhcCHHHHH-hHHhCCHHHHHHHHhccCC---CCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999 9999999999888876542 22233334444444432 1345566677788899999
Q ss_pred HHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccc
Q 013210 315 RRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSG 393 (447)
Q Consensus 315 ~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a 393 (447)
+.|++++. ...+|. .+.++++.+++ ...+.+.|... | +.+..++..
T Consensus 280 ~~L~~~~~~~~~~ps-------------------~~nfi~~~~~~---~~~l~~~L~~~---g-i~vr~~~~~------- 326 (351)
T PRK01688 280 AALKEIPCVEQVFDS-------------------ETNYILARFTA---SSAVFKSLWDQ---G-IILRDQNKQ------- 326 (351)
T ss_pred HHHHhCCCCCeECCC-------------------CCcEEEEEcCC---HHHHHHHHHHC---C-eEEEECCCc-------
Confidence 99988743 334443 35588888863 35666666642 3 344322110
Q ss_pred cccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013210 394 SSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 436 (447)
Q Consensus 394 ~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 436 (447)
.|. ++++|||+| . .+..+.|.++|
T Consensus 327 --------------~~~-~~~iRis~~-~---~~e~~~l~~al 350 (351)
T PRK01688 327 --------------PGL-SNCLRITIG-T---REECQRVIDAL 350 (351)
T ss_pred --------------CCC-CCeEEEeCC-C---HHHHHHHHHhh
Confidence 022 478999999 3 35556666555
No 106
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.5e-26 Score=229.73 Aligned_cols=244 Identities=18% Similarity=0.199 Sum_probs=176.7
Q ss_pred chHHHHHHHHHHHhC--------C--CeEEEeCChHHHHHHHHHHhcCCCC-eEEEeCCCchhHHHHHHhhcCcccCeeE
Q 013210 99 PTVLNLSRQMAALEG--------T--EAAYCTASGMSAISSVLMQLCSSGG-HVVAARTLYGGTHALLTHFFPRACNITT 167 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g--------~--~~~~~tsggt~A~~~al~~l~~~gd-~Vi~~~~~y~~~~~~~~~~~~~~~g~~~ 167 (447)
+....||+.||++++ . +++++|+|+++++..++.+++.+|| +|+++.|+|+.+...++ ..|.++
T Consensus 66 ~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~-----~~g~~~ 140 (374)
T PRK02610 66 GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQ-----TLGIPV 140 (374)
T ss_pred CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHH-----HcCCEE
Confidence 344679999999986 3 3499999999999988888777775 89999999999887773 367787
Q ss_pred EEeCCC------CHHHHHHhhcc---CCceEEEEEcCCCCCccccCHHHHHHHHH-hcCCEEEEeCCCCCCCCCc-----
Q 013210 168 TFVDIS------DHEMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRLAH-DKGVTVVVDNTFSPLVLSP----- 232 (447)
Q Consensus 168 ~~v~~~------d~~~l~~~i~~---~~t~lV~i~~~~NptG~v~~l~~I~~la~-~~gi~livD~~~~~~~~~~----- 232 (447)
..++.+ |+++|++++.. +++++|++++||||||.+.+.+++.++++ .+++++|+||+|..+....
T Consensus 141 ~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~ 220 (374)
T PRK02610 141 VRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGEL 220 (374)
T ss_pred EEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHH
Confidence 777643 78999988833 58999999999999999998776666553 2489999999996653221
Q ss_pred cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHH
Q 013210 233 ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALI 312 (447)
Q Consensus 233 ~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 312 (447)
......+++.||||.+|.+|.|+ ||+++++++++.+...+.. ...+.+.+.++..++...+.....++++.+.++.
T Consensus 221 ~~~~~~ivi~SfSK~~g~~GlRi-G~~v~~~~l~~~l~~~~~~---~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~ 296 (374)
T PRK02610 221 AQHPNWVILRTFSKAFRLAAHRV-GYAIGHPELIAVLEKVRLP---YNLPSFSQLAAQLALEHRQELLAAIPEILQERDR 296 (374)
T ss_pred hcCCCEEEEEecchhccCcccce-eeeecCHHHHHHHHHhcCC---CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 11234688999999999999999 9999999999988776531 2223444555544444333344445555556777
Q ss_pred HHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 313 FARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 313 l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
+.+.|++++. .+ .|. .|.++++.++...+...+.+.|..
T Consensus 297 l~~~L~~~~~~~~-~p~-------------------~g~f~~~~l~~~~~~~~~~~~l~~ 336 (374)
T PRK02610 297 LYQALQELPQLRV-WPS-------------------AANFLYLRLSQDAALAALHQALKA 336 (374)
T ss_pred HHHHHHhCCCcEe-CCC-------------------cceEEEEeCCCCCCHHHHHHHHHH
Confidence 8888877633 32 232 466899998743335667777754
No 107
>PRK08912 hypothetical protein; Provisional
Probab=99.96 E-value=1.2e-26 Score=231.65 Aligned_cols=241 Identities=19% Similarity=0.214 Sum_probs=178.1
Q ss_pred HHHHHHHHHHh----C----CC-eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 102 LNLSRQMAALE----G----TE-AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 102 ~~l~~~ia~l~----g----~~-~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
.++|+.+++++ | .+ ++++|+|+++|+.+++..++++||+|+++.|.|+.+...+. ..|.++..++.
T Consensus 66 ~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~~~~~~~ 140 (387)
T PRK08912 66 PELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIR-----RAGGVPRLVRL 140 (387)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHH-----HcCCEEEEEec
Confidence 56788888764 3 34 79999999999999999999999999999999998877663 25777776654
Q ss_pred C------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------c---C
Q 013210 173 S------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------A---R 234 (447)
Q Consensus 173 ~------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~---~ 234 (447)
+ |++++++.+ .+++++|++++|+||||.+.+ +++|.++|++|++++|+|++|..+.++. . .
T Consensus 141 ~~~~~~~~~~~l~~~~-~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 219 (387)
T PRK08912 141 EPPHWRLPRAALAAAF-SPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPG 219 (387)
T ss_pred CcccCcCCHHHHHHHh-CccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCC
Confidence 3 689999988 778999999999999999987 6678999999999999999985443321 1 1
Q ss_pred -CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHcc-CCcHHHHHHHHHHHHHH
Q 013210 235 -LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-IPHLGLRMKEHCHRALI 312 (447)
Q Consensus 235 -~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~~~l~~~~~~~~~~~~~ 312 (447)
.+.++++.|+||.+|.+|.|+ ||+++++++++.+....... ....+...+.++...+.. .+++.+..+++.++++.
T Consensus 220 ~~~~~i~~~S~SK~~g~~GlRi-G~~~~~~~~~~~l~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 297 (387)
T PRK08912 220 MRERTVKIGSAGKIFSLTGWKV-GFVCAAPPLLRVLAKAHQFL-TFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDR 297 (387)
T ss_pred ccCceEEEeechhhccCcCcee-EEEecCHHHHHHHHHHHhhc-cccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 246899999999999999999 99999999998887654411 111222223333333332 23345566778899999
Q ss_pred HHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC---HHHHHHHHHHh
Q 013210 313 FARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET---EEKANRLMNYL 369 (447)
Q Consensus 313 l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~---~~~~~~l~~~l 369 (447)
+.+.|++.+..+..|. .|.++|+.++. ......+.+.+
T Consensus 298 l~~~L~~~g~~~~~~~-------------------g~~~l~~~l~~~~~~~~~~~~~~~l 338 (387)
T PRK08912 298 LAAGLRRIGFPVLPSQ-------------------GTYFLTVDLAPLGLAEDDVAFCRRL 338 (387)
T ss_pred HHHHHHhCCCcccCCC-------------------cceEEEecccccCCCCCHHHHHHHH
Confidence 9999998765543221 35578888863 12345676665
No 108
>PRK07777 aminotransferase; Validated
Probab=99.96 E-value=3.1e-26 Score=228.77 Aligned_cols=253 Identities=20% Similarity=0.254 Sum_probs=182.4
Q ss_pred HHHHHHHHHHH----hCC----C-eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 101 VLNLSRQMAAL----EGT----E-AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 101 ~~~l~~~ia~l----~g~----~-~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
..++++.++++ .|. + .+++|+|+++|+.+++.+++.+||+|++..|.|+.+...+. ..|.++..++
T Consensus 63 ~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~-----~~g~~~~~~~ 137 (387)
T PRK07777 63 IPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIA-----MAGAHRVPVP 137 (387)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHH-----HCCCEEEEee
Confidence 35677777765 453 2 59999999999999999999999999999999998876663 2455555554
Q ss_pred C--------CCHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------cC
Q 013210 172 I--------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------AR 234 (447)
Q Consensus 172 ~--------~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~~ 234 (447)
. .|+++|++++ ++++++|++++|+||||.+.+ +++|.++|+++++++|+|++|..+.+.. ..
T Consensus 138 ~~~~~~~~~~d~~~l~~~~-~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~ 216 (387)
T PRK07777 138 LVPDGRGFALDLDALRAAV-TPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLAT 216 (387)
T ss_pred cCCccCCCcCCHHHHHHhc-CcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhh
Confidence 3 2789999988 678999999999999999975 7788999999999999999996544321 11
Q ss_pred ----CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHcc-CCcHHHHHHHHHHH
Q 013210 235 ----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-IPHLGLRMKEHCHR 309 (447)
Q Consensus 235 ----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~~~l~~~~~~~~~~ 309 (447)
.+.++++.|+||.+|.+|.|+ ||+++++++++.+....... ....+++.+.++...+.. .+++....+.+.++
T Consensus 217 ~~~~~~~~i~~~S~SK~~g~~GlRi-G~~~~~~~l~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 294 (387)
T PRK07777 217 LPGMRERTVTISSAAKTFNVTGWKI-GWACGPAPLIAAVRAAKQYL-TYVGGAPFQPAVAHALDHEDAWVAALRDSLQAK 294 (387)
T ss_pred CCCCcCcEEEEeechhhccCcCcee-EEEecCHHHHHHHHHHHhhc-ccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHH
Confidence 247899999999999999999 99999999988887655411 123334444344333432 23455556778999
Q ss_pred HHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhhccccccccccccc
Q 013210 310 ALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQNYAQFGFMAVSLG 383 (447)
Q Consensus 310 ~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~l~~~l~~~~~~g~~~vs~G 383 (447)
++.+.+.|++.+.++..|. .|.++|+.++. ......|.+.|.. +.| +.+..|
T Consensus 295 ~~~l~~~L~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~~~~~~~~~l~~--~~g-v~v~pg 348 (387)
T PRK07777 295 RDRLAAGLAEAGFEVHDSA-------------------GTYFLCADPRPLGYDDGTEFCRALPE--RVG-VAAIPM 348 (387)
T ss_pred HHHHHHHHHhCCCCccCCC-------------------cceEEEecccccCCCCHHHHHHHHHH--hCC-EEEeCc
Confidence 9999999988765543221 34577777642 1235677777742 123 455555
No 109
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.6e-26 Score=229.91 Aligned_cols=217 Identities=20% Similarity=0.253 Sum_probs=165.6
Q ss_pred HHHHHHHHHHHh----C----CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 101 VLNLSRQMAALE----G----TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 101 ~~~l~~~ia~l~----g----~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
...+|+.+|+++ | .+++++|+|+++|+..++.+++++||+|+++.|+|..+...+. ..|.++..++.
T Consensus 70 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~-----~~g~~~~~~~~ 144 (393)
T PRK05764 70 IPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVK-----LAGGVPVFVPT 144 (393)
T ss_pred hHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH-----HcCCEEEEEec
Confidence 467888888886 2 2459999999999999999999999999999999998877662 26778877765
Q ss_pred C-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc----------
Q 013210 173 S-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP---------- 232 (447)
Q Consensus 173 ~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~---------- 232 (447)
+ |++++++.+ ++++++|++++|+||||.+.+ +++|+++|++||+++++|++|..+.++.
T Consensus 145 ~~~~~~~~d~~~l~~~l-~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 223 (393)
T PRK05764 145 GEENGFKLTVEQLEAAI-TPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLS 223 (393)
T ss_pred CcccCCcCCHHHHHHhh-CccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcC
Confidence 3 578999988 778999999999999999975 7789999999999999999996553311
Q ss_pred -cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHcc-CCcHHHHHHHHHHHH
Q 013210 233 -ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-IPHLGLRMKEHCHRA 310 (447)
Q Consensus 233 -~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~~~l~~~~~~~~~~~ 310 (447)
...+.++++.|+||.+|.+|.|+ ||+++++++++.+....... ....+.+.+.++...+.. .+++....+++.+++
T Consensus 224 ~~~~~~~i~~~s~SK~~~~~G~Ri-G~i~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 301 (393)
T PRK05764 224 PELRDRTITVNGFSKAYAMTGWRL-GYAAGPKELIKAMSKLQSHS-TSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERR 301 (393)
T ss_pred CCCcCCEEEEecCcccccCcccee-EEEecCHHHHHHHHHHHhhc-ccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 11257899999999999999999 99999999998887665411 112222333333334432 233445566678888
Q ss_pred HHHHHHHHhC-CCeee
Q 013210 311 LIFARRMKKL-GLKVL 325 (447)
Q Consensus 311 ~~l~~~L~~~-~~~v~ 325 (447)
+.+.+.|+++ +..+.
T Consensus 302 ~~l~~~L~~~~g~~~~ 317 (393)
T PRK05764 302 DLMVDGLNEIPGLECP 317 (393)
T ss_pred HHHHHHHhhCCCCccc
Confidence 8899999887 44443
No 110
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=9.6e-27 Score=229.65 Aligned_cols=240 Identities=15% Similarity=0.141 Sum_probs=177.8
Q ss_pred hHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC----
Q 013210 100 TVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS---- 173 (447)
Q Consensus 100 ~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~---- 173 (447)
...++++.+|++++. +.+++|+|+++++.+++++++++||+|++++|+|+.+...+. ..|.++..++.+
T Consensus 61 ~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~-----~~g~~~~~v~~~~~~~ 135 (353)
T PRK05387 61 NADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYPVYAG-----LYGIPYEEIPLDDDFS 135 (353)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHH-----HcCCEEEEeecCCCCC
Confidence 347899999999986 459999999999999999999999999999999987766552 257777777653
Q ss_pred -CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhc-CCEEEEeCCCCCCCCCc-----cCCCCeEEEeCCCc
Q 013210 174 -DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK-GVTVVVDNTFSPLVLSP-----ARLGADVVVHSISK 246 (447)
Q Consensus 174 -d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~-gi~livD~~~~~~~~~~-----~~~g~di~~~S~sK 246 (447)
|++++++ ++++|++++||||||.+.+.+++.++++.+ ++++|+||+|..+.... .....++++.|+||
T Consensus 136 ~d~~~l~~-----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK 210 (353)
T PRK05387 136 IDVEDYLR-----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSK 210 (353)
T ss_pred CCHHHHHh-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhH
Confidence 5666542 457899999999999999999999999875 99999999985543211 12356899999999
Q ss_pred cccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeC
Q 013210 247 FISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLY 326 (447)
Q Consensus 247 ~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~ 326 (447)
.+|.+|.|+ ||+++++++++.+...+........+.+.+.++..++...+.+....+++.++++.+.+.|++++..+ .
T Consensus 211 ~~~~~GlR~-G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~ 288 (353)
T PRK05387 211 SRSLAGLRV-GFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEALGFEV-L 288 (353)
T ss_pred hhcchhhhc-eeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeE-C
Confidence 999999999 99999999998887765411101122233333434443333455566778888999999999886654 2
Q ss_pred CCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 327 PGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 327 p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
|. .|+++++.+++. ....+.+.|..
T Consensus 289 ~~-------------------~~~~~~~~~~~~-~~~~~~~~l~~ 313 (353)
T PRK05387 289 PS-------------------KANFVFARHPSH-DAAELAAKLRE 313 (353)
T ss_pred CC-------------------cCcEEEEECCCC-CHHHHHHHHHH
Confidence 32 345888887642 24567777764
No 111
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.96 E-value=3.4e-26 Score=225.28 Aligned_cols=310 Identities=18% Similarity=0.184 Sum_probs=215.2
Q ss_pred HHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHH
Q 013210 74 ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHA 153 (447)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~ 153 (447)
+.+.+.+.. ++++-+.+.+.....+..+++++.+++++|++..+++++|++++..++++++++||+|+++.+.|+++..
T Consensus 22 ~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~ 100 (349)
T cd06454 22 EAAKEALDK-YGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIID 100 (349)
T ss_pred HHHHHHHHH-hCCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHH
Confidence 556665543 4433233333334577789999999999999888889999999999998888999999999999998876
Q ss_pred HHHhhcCcccCeeEEEeCCCCHHHHHHhhcc----CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCC-C-
Q 013210 154 LLTHFFPRACNITTTFVDISDHEMVNSAIVQ----GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-P- 227 (447)
Q Consensus 154 ~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~----~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~- 227 (447)
.+. . .|.++.+++..|.++++++++. +++++|++++++||+|.+.|+++|+++|+++|+++|+|++|+ +
T Consensus 101 ~~~----~-~g~~~~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~ 175 (349)
T cd06454 101 GIR----L-SGAKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGV 175 (349)
T ss_pred HHH----H-cCCceEEecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccc
Confidence 652 2 5788887777788899988843 457899999999999999999999999999999999999984 2
Q ss_pred CCC--------CccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHH---HHHHHHccC
Q 013210 228 LVL--------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPK---VAFELSERI 296 (447)
Q Consensus 228 ~~~--------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~---~a~~~~~~~ 296 (447)
+.. .....++|+++.|+||.++++| |+++.++++++.+....... ..+.+..+. ++...+..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g----G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~ 249 (349)
T cd06454 176 YGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG----GYIAGSKELIDYLRSYARGF--IFSTSLPPAVAAAALAALEVL 249 (349)
T ss_pred cCCCCCChhhhccccccCcEEEeechhhhcccC----CEEECCHHHHHHHHHhchhh--hccCCCCHHHHHHHHHHHHHH
Confidence 211 1123478999999999999743 88888888887776543211 122222222 222223222
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccc
Q 013210 297 PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFG 376 (447)
Q Consensus 297 ~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g 376 (447)
.....+.+++.++++.+.+.|.+.+..+..+. .+.++++.++......++.+.|... |
T Consensus 250 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~L~~~---g 307 (349)
T cd06454 250 QGGPERRERLQENVRYLRRGLKELGFPVGGSP-------------------SHIIPPLIGDDPAKAVAFSDALLER---G 307 (349)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHhcCCcccCCC-------------------CCcEEEEeCCChHHHHHHHHHHHhC---C
Confidence 22345667788899999999988765433221 1224555454334456777777752 3
Q ss_pred cccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 377 FMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 377 ~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+.++.++. +.. ....+.|||+++ ...+++.++.+.++|+++
T Consensus 308 -I~~~~~~~------~~~--------------~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 308 -IYVQAIRY------PTV--------------PRGTARLRISLS-AAHTKEDIDRLLEALKEV 348 (349)
T ss_pred -ceEEEecC------Ccc--------------CCCCCeEEEEEe-CCCCHHHHHHHHHHHHHh
Confidence 34333211 000 011478999999 888888899988888754
No 112
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.3e-26 Score=228.81 Aligned_cols=278 Identities=18% Similarity=0.215 Sum_probs=202.0
Q ss_pred chHHHHHHHHHHHhCCC---eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC--
Q 013210 99 PTVLNLSRQMAALEGTE---AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-- 173 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~---~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-- 173 (447)
+...++++.+|++++.+ .+++|+|+++++.+++.+++.+||+|+++.|.|..+...+. ..|.++..++.+
T Consensus 63 ~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~-----~~g~~~~~i~~~~~ 137 (356)
T PRK04870 63 PRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAK-----LAGLEFVGVPLTAD 137 (356)
T ss_pred CCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHHHHHH-----HcCCEEEEecCCCC
Confidence 34578999999999852 59999999999999999989999999999999998876652 368888887654
Q ss_pred ---CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCc-----cCCCCeEEEeCCC
Q 013210 174 ---DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSP-----ARLGADVVVHSIS 245 (447)
Q Consensus 174 ---d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~-----~~~g~di~~~S~s 245 (447)
|++++++++...++++|++++|+||||.+.+.+++.++++..++++|+|++|..+.... ...+..+++.|+|
T Consensus 138 ~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~S 217 (356)
T PRK04870 138 FTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVS 217 (356)
T ss_pred CCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecch
Confidence 78999998844689999999999999999999888888877688999999995554321 1234679999999
Q ss_pred ccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 013210 246 KFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKL-GLKV 324 (447)
Q Consensus 246 K~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~v 324 (447)
| ++.+|.|+ ||+++++++++.+...+.. ...+.+.+.++..++...+.+....+++.++++.+.+.|++. +..+
T Consensus 218 K-~~~~GlRi-G~~i~~~~~i~~~~~~~~~---~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 292 (356)
T PRK04870 218 K-LGLAGLRL-GYLAGHPAWIAELDKVRPP---YNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTV 292 (356)
T ss_pred h-hhhHHHhh-hhhhCCHHHHHHHHHccCC---CcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEE
Confidence 9 89999999 9999999999888765531 122233344444444433345556677888999999999876 3332
Q ss_pred eCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHH
Q 013210 325 LYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEE 404 (447)
Q Consensus 325 ~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~ 404 (447)
.|. .|+++++.+++ ...+.+.|... | +.+..|... .
T Consensus 293 -~~~-------------------~~~~~~~~~~~---~~~~~~~l~~~---g-I~v~~~~~f--------~--------- 328 (356)
T PRK04870 293 -FPS-------------------AANFILVRVPD---AAAVFDGLKTR---G-VLVKNLSGM--------H--------- 328 (356)
T ss_pred -CCC-------------------CCeEEEEECCC---HHHHHHHHHHC---C-EEEEECCCC--------C---------
Confidence 222 35689999873 34566666652 3 444433110 0
Q ss_pred HHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 405 KALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 405 ~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
+..++++|||++ . .+..+.|.++|++
T Consensus 329 ----~~~~~~iRis~~-~---~~~~~~l~~al~~ 354 (356)
T PRK04870 329 ----PLLANCLRVTVG-T---PEENAQFLAALKA 354 (356)
T ss_pred ----CCCCCeEEEeCC-C---HHHHHHHHHHHHH
Confidence 112478999999 3 3445566666654
No 113
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.96 E-value=2.4e-26 Score=230.63 Aligned_cols=229 Identities=16% Similarity=0.175 Sum_probs=169.7
Q ss_pred HHHHHHHHHHHhC-------CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC-
Q 013210 101 VLNLSRQMAALEG-------TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI- 172 (447)
Q Consensus 101 ~~~l~~~ia~l~g-------~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~- 172 (447)
..++++.+|++++ .+.+++|+|+++|+.+++.+++++||+|+++.|+|..+...+. ..|+++..++.
T Consensus 75 ~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~-----~~g~~v~~~~~~ 149 (401)
T TIGR01264 75 ALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAE-----SMGIEVKLYNLL 149 (401)
T ss_pred CHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHH-----HcCCEEEEeecC
Confidence 4678999999986 3569999999999999999999999999999999998876663 26777776654
Q ss_pred ------CCHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------cCC--
Q 013210 173 ------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------ARL-- 235 (447)
Q Consensus 173 ------~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~~~-- 235 (447)
.|++++++++ +.++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+.++. ..+
T Consensus 150 ~~~~~~~d~~~l~~~~-~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 228 (401)
T TIGR01264 150 PDKSWEIDLKQLESLI-DEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSS 228 (401)
T ss_pred CccCCCCCHHHHHHHh-ccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCC
Confidence 2789999888 667899999999999999986 7788999999999999999996654321 111
Q ss_pred -CCeEEEeCCCccccCCCCeeEEEEEcCh------HHHHHHHHHhhhhhhhcCCCccHHHHHHHHcc--CCcHHHHHHHH
Q 013210 236 -GADVVVHSISKFISGGADIIAGAVCGPA------NLVNSMMDLHQGALMLLGPTMNPKVAFELSER--IPHLGLRMKEH 306 (447)
Q Consensus 236 -g~di~~~S~sK~~g~~g~~igG~l~~~~------~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~--~~~l~~~~~~~ 306 (447)
...+++.||||.|+.+|.|+ ||+++++ ++++.+...... ....+.+.+.++..++.. .+++....+++
T Consensus 229 ~~~vi~~~SfSK~~~~~GlRi-G~iv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~ 305 (401)
T TIGR01264 229 TVPILSCGGLAKRWLVPGWRL-GWIIIHDRRGILRDIRDGLVKLSQR--ILGPCTIVQGALPSILLRTPQEYFDGTLSVL 305 (401)
T ss_pred CCcEEEEccCcccCCCccceE-EEEEecCcchhHHHHHHHHHHHhhc--cCCCCcHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 23689999999999999999 9998763 344444433220 012234444444444432 23455666778
Q ss_pred HHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 307 CHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 307 ~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
+++++.+.+.|++++ ..+..|. .|.++++.++
T Consensus 306 ~~~r~~l~~~L~~~~~~~~~~p~-------------------~g~f~~~~~~ 338 (401)
T TIGR01264 306 ESNAMLCYGALAAVPGLRPVMPS-------------------GAMYMMVGIE 338 (401)
T ss_pred HHHHHHHHHHHHhCCCCcccCCC-------------------eeeEEEEEec
Confidence 889999999998863 2333332 5678899875
No 114
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.96 E-value=1.6e-26 Score=232.45 Aligned_cols=242 Identities=16% Similarity=0.182 Sum_probs=175.9
Q ss_pred HHHHHHHHHHHhC--------------CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCee
Q 013210 101 VLNLSRQMAALEG--------------TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNIT 166 (447)
Q Consensus 101 ~~~l~~~ia~l~g--------------~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 166 (447)
..++++.||++++ .+.+++|+|+++|+.+++.+++++||+|+++.|+|+.+...+. ..|.+
T Consensus 77 ~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~-----~~g~~ 151 (412)
T PTZ00433 77 SPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCK-----AYGIE 151 (412)
T ss_pred cHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHH-----HcCCE
Confidence 4678888888865 2469999999999999999999999999999999999877763 25777
Q ss_pred EEEeCCC-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc----
Q 013210 167 TTFVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP---- 232 (447)
Q Consensus 167 ~~~v~~~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~---- 232 (447)
+..++.+ |+++|++++ ++++++|++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++.
T Consensus 152 ~~~i~~~~~~~~~~d~~~l~~~~-~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~ 230 (412)
T PTZ00433 152 MRFYNCRPEKDWEADLDEIRRLV-DDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFT 230 (412)
T ss_pred EEEEecCccccCcCCHHHHHHHh-ccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCcc
Confidence 7776542 688999888 678999999999999999876 6778999999999999999996654321
Q ss_pred --cCC---CCeEEEeCCCccccCCCCeeEEEEEc--C----hHHHHHHHHHhhhhhhhcCCCccHHHHHHHHcc-C-CcH
Q 013210 233 --ARL---GADVVVHSISKFISGGADIIAGAVCG--P----ANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-I-PHL 299 (447)
Q Consensus 233 --~~~---g~di~~~S~sK~~g~~g~~igG~l~~--~----~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~-~~l 299 (447)
..+ ...+++.||||.+|.+|.|+ ||++. + +++++.+...... ....+.+.+.++...+.. . .++
T Consensus 231 ~~~~~~~~~~~i~~~SfSK~~~~pGlRl-G~~i~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~q~a~~~~l~~~~~~~~ 307 (412)
T PTZ00433 231 SVADFDTTVPRVILGGTAKNLVVPGWRL-GWLLLVDPHGNGGDFLDGMKRLGML--VCGPCSVVQAALGEALLNTPQEHL 307 (412)
T ss_pred chhhccCCCceEEEccchhhcCCCCeeE-EEEEEeCCcccHHHHHHHHHHHhhc--cCCCChHHHHHHHHHHhcCcHHHH
Confidence 111 23588999999999999999 99985 2 3566666554331 122333344444444433 1 335
Q ss_pred HHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-----HHHHHHHHHhh
Q 013210 300 GLRMKEHCHRALIFARRMKKL-GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-----EKANRLMNYLQ 370 (447)
Q Consensus 300 ~~~~~~~~~~~~~l~~~L~~~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-----~~~~~l~~~l~ 370 (447)
....++++++++.+.+.|+++ +..+..|. .|.++++.++.. .....+.+.|.
T Consensus 308 ~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~-------------------gg~f~~~~l~~~~~~~~~~~~~~~~~ll 365 (412)
T PTZ00433 308 EQIVAKLEEGAMVLYNHIGECIGLSPTMPR-------------------GSMFLMSRLDLEKFRDIKSDVEFYEKLL 365 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcccCCC-------------------eeEEEEEEechhhcCCCCCHHHHHHHHH
Confidence 556667888999999999875 33333332 466888888631 12456666664
No 115
>PRK07683 aminotransferase A; Validated
Probab=99.96 E-value=6.2e-26 Score=226.41 Aligned_cols=217 Identities=21% Similarity=0.311 Sum_probs=167.1
Q ss_pred HHHHHHHHHHHh----C----CC-eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 101 VLNLSRQMAALE----G----TE-AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 101 ~~~l~~~ia~l~----g----~~-~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
..++|+.+|+++ | .+ ++++|+|+++|+.+++.+++++||+|+++.|.|+.+...+. ..|.++.+++
T Consensus 67 ~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-----~~g~~~~~~~ 141 (387)
T PRK07683 67 LLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIR-----LCGAKPVFID 141 (387)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHH-----HcCCEEEEee
Confidence 467888888886 2 24 79999999999999999999999999999999998877763 2688888887
Q ss_pred CC------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC-----ccC---
Q 013210 172 IS------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS-----PAR--- 234 (447)
Q Consensus 172 ~~------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~-----~~~--- 234 (447)
.+ |.+++++.+ ++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+.+. ...
T Consensus 142 ~~~~~~~~~~~~l~~~~-~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 220 (387)
T PRK07683 142 TRSTGFRLTAEALENAI-TEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPE 220 (387)
T ss_pred cCcccCCCCHHHHHHhc-CcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccC
Confidence 54 568899888 678999999999999999986 778899999999999999999655432 111
Q ss_pred -CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHcc-CCcHHHHHHHHHHHHHH
Q 013210 235 -LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-IPHLGLRMKEHCHRALI 312 (447)
Q Consensus 235 -~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~~~l~~~~~~~~~~~~~ 312 (447)
.+.++++.|+||.+|.+|.|+ ||+++++++++.+..... ......+.+.+.++..++.. ..++....+++.++++.
T Consensus 221 ~~~~vi~~~s~SK~~~~pGlRi-G~i~~~~~l~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 298 (387)
T PRK07683 221 MREKTIVINGLSKSHSMTGWRI-GFLFAPSYLAKHILKVHQ-YNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDY 298 (387)
T ss_pred CcCCeEEEeeccccccCcccee-EEEEcCHHHHHHHHHHHH-hccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 146799999999999999999 999999999988876543 11122233444444444433 23344455667888899
Q ss_pred HHHHHHhCCCeee
Q 013210 313 FARRMKKLGLKVL 325 (447)
Q Consensus 313 l~~~L~~~~~~v~ 325 (447)
+.+.|++.+..+.
T Consensus 299 ~~~~l~~~~~~~~ 311 (387)
T PRK07683 299 VYNRLISMGLDVE 311 (387)
T ss_pred HHHHHHHcCCccc
Confidence 9999988755443
No 116
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.8e-26 Score=230.64 Aligned_cols=243 Identities=16% Similarity=0.210 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHh----C----CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 101 VLNLSRQMAALE----G----TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 101 ~~~l~~~ia~l~----g----~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
...+|+.+|+++ | .+++++|+|+++|+.+++.+++++||+|++++|+|.++...+. ..|.++..++.
T Consensus 72 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~-----~~g~~~~~v~~ 146 (391)
T PRK08361 72 IPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAK-----IAEAKPIRIPL 146 (391)
T ss_pred cHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHH-----HcCCEEEEEec
Confidence 467888888886 3 2569999999999999999999999999999999999877663 25777777654
Q ss_pred -------CCHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------c--C
Q 013210 173 -------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------A--R 234 (447)
Q Consensus 173 -------~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~--~ 234 (447)
.|++++++.+ ++++++|++++|+||||.+.| +++|+++|+++++++|+|++|..+.++. . .
T Consensus 147 ~~~~~~~~d~~~l~~~i-~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 225 (391)
T PRK08361 147 REENEFQPDPDELLELI-TKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA 225 (391)
T ss_pred CCccCCCCCHHHHHHhc-ccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC
Confidence 2789999988 678999999999999999999 7889999999999999999996654321 1 1
Q ss_pred CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCC---cHHHHHHHHHHHHH
Q 013210 235 LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP---HLGLRMKEHCHRAL 311 (447)
Q Consensus 235 ~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~---~l~~~~~~~~~~~~ 311 (447)
...++++.|+||.+|.+|.|+ ||+++++++++.+...... .....+.+.+.++..++.... .+....+.+.++++
T Consensus 226 ~~~~i~~~s~SK~~~~~GlRi-G~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 303 (391)
T PRK08361 226 PDNTILANSFSKTFAMTGWRL-GFVIAPEQVIKDMIKLHAY-IIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRK 303 (391)
T ss_pred CCCEEEEecCchhcCCcHhhh-hhhccCHHHHHHHHHHHhh-hccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHH
Confidence 246899999999999999999 9999999998887665431 111222333444444443322 24555667788889
Q ss_pred HHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHhh
Q 013210 312 IFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYLQ 370 (447)
Q Consensus 312 ~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~l~~~l~ 370 (447)
.+.+.|++.+ ..+..|. .|.++|+.++. ..+...+...|.
T Consensus 304 ~~~~~L~~~~~~~~~~p~-------------------g~~~~~~~l~~~~~~~~~l~~~l~ 345 (391)
T PRK08361 304 LVLKRLKEMPHIKVFEPK-------------------GAFYVFANIDETGMSSEDFAEWLL 345 (391)
T ss_pred HHHHHHHhCCCCeecCCC-------------------EEEEEEEECCCCCCCHHHHHHHHH
Confidence 9999998763 3443332 34578888863 112455666553
No 117
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.96 E-value=6e-26 Score=224.39 Aligned_cols=285 Identities=18% Similarity=0.186 Sum_probs=204.2
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHH
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEM 177 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 177 (447)
.+...++++.++++++.+..+++++|++++..++.+++++||+|+++.+.|+.+...+. ..|.++..++..|+++
T Consensus 60 ~~~~~~l~~~la~~~~~~~~i~~~~G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~-----~~g~~~~~~~~~d~~~ 134 (360)
T TIGR00858 60 SPLHEELEEELAEWKGTEAALLFSSGYLANVGVISALVGKGDLILSDALNHASLIDGCR-----LSGARVRRYRHNDVEH 134 (360)
T ss_pred cHHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHH-----hcCCceEEecCCCHHH
Confidence 45678899999999998777777788888888888888999999999999998877662 2577888887789999
Q ss_pred HHHhhcc---CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCc-----------cCCCCeEEEeC
Q 013210 178 VNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSP-----------ARLGADVVVHS 243 (447)
Q Consensus 178 l~~~i~~---~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~-----------~~~g~di~~~S 243 (447)
|++.++. +++++|++++++|++|.+.|+++|.++|+++|+++|+|++|+.+.+.. ...+.++++.|
T Consensus 135 l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s 214 (360)
T TIGR00858 135 LERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGT 214 (360)
T ss_pred HHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEe
Confidence 9998843 357899999999999999999999999999999999999994322111 11367899999
Q ss_pred CCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHH-HHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC
Q 013210 244 ISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVA-FELSERIPHLGLRMKEHCHRALIFARRMKKLGL 322 (447)
Q Consensus 244 ~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a-~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~ 322 (447)
+||++++.| ||+++++++++.+...........+.......+ ..++..........+++.++++++.+.|++++.
T Consensus 215 ~sK~~~~~g----G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 290 (360)
T TIGR00858 215 LSKALGSYG----AYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALGF 290 (360)
T ss_pred chhhhhccC----cEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999754 899999988887764433111111222222222 223332233345667889999999999988765
Q ss_pred eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCH
Q 013210 323 KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNA 402 (447)
Q Consensus 323 ~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~ 402 (447)
++. +. .|.++++.++.......+.+.|... | +.+..+.. +..
T Consensus 291 ~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~l~~~---g-I~v~~~~~------~~~-------- 332 (360)
T TIGR00858 291 TLM-PS-------------------CTPIVPVIIGDNASALALAEELQQQ---G-IFVGAIRP------PTV-------- 332 (360)
T ss_pred ccC-CC-------------------CCCEEEEEeCCHHHHHHHHHHHHHC---C-eeEeeeCC------CCC--------
Confidence 432 11 3558999987544466788887753 3 34433211 000
Q ss_pred HHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013210 403 EEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 436 (447)
Q Consensus 403 ~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 436 (447)
.-..+.||||++ ..++++.++.+.++|
T Consensus 333 ------~~~~~~iRis~~-~~~~~~~i~~~l~~l 359 (360)
T TIGR00858 333 ------PAGTSRLRLTLS-AAHTPGDIDRLAEAL 359 (360)
T ss_pred ------CCCCceEEEEEc-CCCCHHHHHHHHHhh
Confidence 011357999999 877888888877765
No 118
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.3e-26 Score=230.02 Aligned_cols=219 Identities=16% Similarity=0.163 Sum_probs=168.6
Q ss_pred CchHHHHHHHHHHHh----C----CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEE
Q 013210 98 NPTVLNLSRQMAALE----G----TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTF 169 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~----g----~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~ 169 (447)
.+....+++.+|+++ | .+++++|+|+++++.+++++++++||.|++..|.|+.+...+. ..|.++..
T Consensus 64 ~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~-----~~g~~~~~ 138 (368)
T PRK03317 64 DRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPIIAR-----GTHTEWVE 138 (368)
T ss_pred CCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHH-----hcCCeeEE
Confidence 334577999999987 3 2469999999999999999999999999999999998877663 25666665
Q ss_pred eCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCc----c----CCC
Q 013210 170 VDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSP----A----RLG 236 (447)
Q Consensus 170 v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~----~----~~g 236 (447)
++.+ |++++++++...++++|++++|+||||.+.+.+++.++++..++++|+||+|..+.+.. . ..+
T Consensus 139 ~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~ 218 (368)
T PRK03317 139 GPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYP 218 (368)
T ss_pred cccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCC
Confidence 5432 78999998844678999999999999999999999999999999999999996653321 1 113
Q ss_pred CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH
Q 013210 237 ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARR 316 (447)
Q Consensus 237 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~ 316 (447)
..+++.||||.+|.+|.|+ ||+++++++++.+...+. ....+.+.+.++..++...+.+.+..+++.++++.+.+.
T Consensus 219 ~~i~~~SfSK~~g~~GlRi-G~~~~~~~~~~~l~~~~~---~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 294 (368)
T PRK03317 219 RLVVSRTMSKAFAFAGGRL-GYLAAAPAVVDALRLVRL---PYHLSAVTQAAARAALRHADELLASVAALRAERDRVVAW 294 (368)
T ss_pred CEEEEEechhhhccchhhh-hhhhCCHHHHHHHHhcCC---CCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999 999999999988876543 123334444444444444344455566778888889999
Q ss_pred HHhCCCeee
Q 013210 317 MKKLGLKVL 325 (447)
Q Consensus 317 L~~~~~~v~ 325 (447)
|++.+..+.
T Consensus 295 L~~~g~~~~ 303 (368)
T PRK03317 295 LRELGLRVA 303 (368)
T ss_pred HHHCCCEeC
Confidence 988766543
No 119
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.96 E-value=2.9e-26 Score=229.67 Aligned_cols=238 Identities=19% Similarity=0.167 Sum_probs=174.7
Q ss_pred HHHHHHHHHHh----CC-----C-eEEEeCChHHHHHHHHHHhcCC---CCeEEEeCCCchhHHHHHHhhcCcccCeeEE
Q 013210 102 LNLSRQMAALE----GT-----E-AAYCTASGMSAISSVLMQLCSS---GGHVVAARTLYGGTHALLTHFFPRACNITTT 168 (447)
Q Consensus 102 ~~l~~~ia~l~----g~-----~-~~~~tsggt~A~~~al~~l~~~---gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~ 168 (447)
.++++.||+++ |. + .+++|+|+++|+..++++++++ ||.|+++.|.|+.+...+. ..|.++.
T Consensus 68 ~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~-----~~g~~~~ 142 (396)
T PRK09147 68 PALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAAL-----LAGAEPY 142 (396)
T ss_pred HHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHH-----hcCCEEE
Confidence 45777777654 52 3 5899999999999999999999 8999999999998877662 3677888
Q ss_pred EeCCC-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------
Q 013210 169 FVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------ 232 (447)
Q Consensus 169 ~v~~~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------ 232 (447)
.++.+ |++++++.+ .+++++|++++||||||.+.+ +++|+++|++|++++|+||+|..+.++.
T Consensus 143 ~vp~~~~~~~~~d~~~l~~~~-~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~ 221 (396)
T PRK09147 143 FLNCDPANNFAPDFDAVPAEV-WARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLG 221 (396)
T ss_pred EeccCccccCccCHHHHHHHH-hhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCch
Confidence 77653 678898877 568999999999999999985 6788888999999999999996654321
Q ss_pred -c---------CCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHH
Q 013210 233 -A---------RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLR 302 (447)
Q Consensus 233 -~---------~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~ 302 (447)
. ..+..+++.|+||.++.+|.|+ ||+++++++++.+...+... ....+.+.+.++...+...+++.+.
T Consensus 222 ~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRi-G~~~~~~~l~~~~~~~~~~~-~~~~~~~~q~a~~~~~~~~~~~~~~ 299 (396)
T PRK09147 222 LLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRS-GFVAGDAALLKKFLLYRTYH-GCAMPPAVQAASIAAWNDEAHVREN 299 (396)
T ss_pred hhhhccccCccccccEEEEeccccccCCcccee-eeecCCHHHHHHHHHHhhhc-ccCCCHHHHHHHHHHhcchhHHHHH
Confidence 0 1235699999999999999999 99999999998887655411 1122223333333333333445566
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHh
Q 013210 303 MKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYL 369 (447)
Q Consensus 303 ~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l 369 (447)
.+.++++++.+.+.|++. ..+..| ..|.++|+.++. ....+...|
T Consensus 300 ~~~~~~~~~~~~~~L~~~-~~~~~p-------------------~~g~f~~~~~~~--~~~~~~~~l 344 (396)
T PRK09147 300 RALYREKFDAVTPILAPV-LDVQLP-------------------DAGFYLWAKVPG--DDTEFARRL 344 (396)
T ss_pred HHHHHHHHHHHHHHHHHh-cCCCCC-------------------CeeEEEEEECCC--CHHHHHHHH
Confidence 677888888899988774 333222 257799999872 134555555
No 120
>PRK09148 aminotransferase; Validated
Probab=99.96 E-value=2.7e-26 Score=230.24 Aligned_cols=242 Identities=14% Similarity=0.105 Sum_probs=176.7
Q ss_pred HHHHHHHHHHh----C----CC-eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 102 LNLSRQMAALE----G----TE-AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 102 ~~l~~~ia~l~----g----~~-~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
.++++.+|+++ | .+ .+++|+|+++++..++..++.+||+|+++.|+|+.+...+. ..|.++..++.
T Consensus 71 ~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~-----~~g~~v~~v~~ 145 (405)
T PRK09148 71 PGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFI-----MAGGVIRSVPA 145 (405)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHH-----hcCCEEEEEeC
Confidence 56788888776 3 24 69999999999999999999999999999999999876663 26878877765
Q ss_pred C----CHHHHHHhhc--cCCceEEEEEcCCCCCccccCH---HHHHHHHHhcCCEEEEeCCCCCCCCC------ccCC--
Q 013210 173 S----DHEMVNSAIV--QGRTKVLYFESISNPTLAVANI---PELSRLAHDKGVTVVVDNTFSPLVLS------PARL-- 235 (447)
Q Consensus 173 ~----d~~~l~~~i~--~~~t~lV~i~~~~NptG~v~~l---~~I~~la~~~gi~livD~~~~~~~~~------~~~~-- 235 (447)
+ .+++++++++ .+++++|++++||||||.+.+. ++|.++|++||+++|+||+|..+.++ ...+
T Consensus 146 ~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~ 225 (405)
T PRK09148 146 EPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPG 225 (405)
T ss_pred CCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCC
Confidence 3 3344444442 3678999999999999999985 67889999999999999999654332 1111
Q ss_pred --CCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC-CcHHHHHHHHHHHHHH
Q 013210 236 --GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKEHCHRALI 312 (447)
Q Consensus 236 --g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~~~~~~~~ 312 (447)
+..+++.||||.+|.+|.|+ ||+++++++++.+...+... ....+.+.+.++..++... .++....+.++++++.
T Consensus 226 ~~~~~i~~~SfSK~~~~pGlR~-G~~v~~~~~i~~l~~~~~~~-~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~ 303 (405)
T PRK09148 226 AKDVTVEFTSMSKTFSMAGWRM-GFAVGNERLIAALTRVKSYL-DYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDV 303 (405)
T ss_pred ccCcEEEEeccccccCCcchhe-eeeeCCHHHHHHHHHHHHHh-ccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 34678999999999999999 99999999999887765411 1233444555555555432 3355566678999999
Q ss_pred HHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHH---HHHHHHHHh
Q 013210 313 FARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEE---KANRLMNYL 369 (447)
Q Consensus 313 l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~---~~~~l~~~l 369 (447)
+.+.|++++..+..|. .|.++|+.++... ....+...+
T Consensus 304 l~~~L~~~~~~~~~p~-------------------~g~f~~~~l~~~~~~~~~~~~~~~l 344 (405)
T PRK09148 304 LVESFGRAGWDIPPPA-------------------ASMFAWAPIPEAFRHLGSLEFSKLL 344 (405)
T ss_pred HHHHHHHcCCccCCCC-------------------eeEEEEEECCCccCCCCHHHHHHHH
Confidence 9999988765433232 4668999887321 134555554
No 121
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.95 E-value=5.7e-26 Score=229.02 Aligned_cols=213 Identities=17% Similarity=0.193 Sum_probs=159.1
Q ss_pred HHHHHHHHHHHhCC--------CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 101 VLNLSRQMAALEGT--------EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 101 ~~~l~~~ia~l~g~--------~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
..++|+.+|++++. +++++|+|+++|+.+++..++++||+|+++.|.|+.+..... ..|.++++++.
T Consensus 96 ~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~-----~~g~~~~~~~~ 170 (430)
T PLN00145 96 LLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAV-----FSGLEVRHFDL 170 (430)
T ss_pred CHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHH-----HcCCEEEEeeC
Confidence 46789999998742 569999999999999999999999999999999998766552 25777777653
Q ss_pred C-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc---c------
Q 013210 173 S-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP---A------ 233 (447)
Q Consensus 173 ~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~---~------ 233 (447)
. |++++++++ +++++++++++|+||||.+.+ +++|+++|+++|+++|+|++|..+.++. .
T Consensus 171 ~~~~~~~~d~~~l~~~~-~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~ 249 (430)
T PLN00145 171 LPERGWEVDLEGVEALA-DENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFG 249 (430)
T ss_pred CcccCCcCCHHHHHHHh-CcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhc
Confidence 1 889999988 788999999999999999998 7788899999999999999996654421 1
Q ss_pred CCCCeEEEeCCCccccCCCCeeEEEEEc--ChHHHHH---HHHHhhhhhhhcC-CCccHHHHHHHHcc--CCcHHHHHHH
Q 013210 234 RLGADVVVHSISKFISGGADIIAGAVCG--PANLVNS---MMDLHQGALMLLG-PTMNPKVAFELSER--IPHLGLRMKE 305 (447)
Q Consensus 234 ~~g~di~~~S~sK~~g~~g~~igG~l~~--~~~~~~~---l~~~~~~~~~~~g-~~~~~~~a~~~~~~--~~~l~~~~~~ 305 (447)
.....+++.|+||.|+.+|+|+ ||++. ++.+++. +...........+ +++.+.++..++.. ...+....++
T Consensus 250 ~~~~vi~~~S~SK~~~~pG~Rl-G~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~ 328 (430)
T PLN00145 250 EVAPVLTLGSISKRWVVPGWRL-GWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGL 328 (430)
T ss_pred ccCcEEEEeccccccCCCCeeE-EEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 1136799999999999999999 99986 4444432 1122111111111 23344444444443 1335666778
Q ss_pred HHHHHHHHHHHHHhC
Q 013210 306 HCHRALIFARRMKKL 320 (447)
Q Consensus 306 ~~~~~~~l~~~L~~~ 320 (447)
++++++.+.+.|+++
T Consensus 329 ~~~~~~~~~~~L~~~ 343 (430)
T PLN00145 329 LKETADICYEKIKEI 343 (430)
T ss_pred HHHHHHHHHHHHhcC
Confidence 889999999999876
No 122
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.95 E-value=3.5e-26 Score=223.20 Aligned_cols=268 Identities=18% Similarity=0.191 Sum_probs=193.2
Q ss_pred HHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHh
Q 013210 102 LNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSA 181 (447)
Q Consensus 102 ~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~ 181 (447)
..|++.||+.++.+.+++|+|+++++.+++. +.+||+|+++.|+|+.+...+. ..|.++..++.+ +++++
T Consensus 52 ~~Lr~~ia~~~~~~~I~it~Gs~~al~~~~~--~~~gd~v~v~~P~y~~~~~~~~-----~~g~~~~~v~~~---~~~~~ 121 (330)
T PRK05664 52 DGLEAAARAYYGAPQLLPVAGSQAAIQALPR--LRAPGRVGVLSPCYAEHAHAWR-----RAGHQVRELDEA---EVEAA 121 (330)
T ss_pred HHHHHHHHHHhCCCCEEECcCHHHHHHHHHH--ccCCCEEEEcCCChHHHHHHHH-----HcCCeEEEechh---hHhhh
Confidence 6899999999999999999999999998763 5789999999999999988773 368888888754 45565
Q ss_pred hccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCC--Ccc---CCCCeEEEeCCCccccCCCC
Q 013210 182 IVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVL--SPA---RLGADVVVHSISKFISGGAD 253 (447)
Q Consensus 182 i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~--~~~---~~g~di~~~S~sK~~g~~g~ 253 (447)
+ + +++++++++||||||.+.+ +++|+++|+++|+++|+||+|..+.. ... ..+..+++.||||.+|.+|.
T Consensus 122 ~-~-~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~Gl 199 (330)
T PRK05664 122 L-D-SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGA 199 (330)
T ss_pred h-c-CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCc
Confidence 6 3 6788999999999999997 45666677889999999999954421 111 22456999999999999999
Q ss_pred eeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCc
Q 013210 254 IIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHP 333 (447)
Q Consensus 254 ~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p 333 (447)
|+ ||+++++++++.+...... ...+...+.++..++..........+++.++++.+.+.|++++.+ |. +
T Consensus 200 Ri-G~~v~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~---~~----~ 268 (330)
T PRK05664 200 RL-GFVLAEPALLRALAELLGP---WTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHGLT---PA----G 268 (330)
T ss_pred ce-EEEEeCHHHHHHHHHhcCC---CCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCCCc---cc----C
Confidence 99 9999999999888766441 122333344444444443334445667788899999999887542 11 0
Q ss_pred hhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCC
Q 013210 334 HHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAG 413 (447)
Q Consensus 334 ~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~ 413 (447)
|.+.++++.+++ ...+.+.|... | +.|.. + + ..+
T Consensus 269 -------------~~~~f~~~~~~~---~~~~~~~l~~~---g-i~v~~--f-----------------------~-~~~ 302 (330)
T PRK05664 269 -------------GCALFQWVRTED---AAALHEFLARR---G-ILTRL--F-----------------------E-QPA 302 (330)
T ss_pred -------------CcceEEEEecCC---HHHHHHHHHHC---C-eEEEE--C-----------------------C-CCC
Confidence 233467777653 45666666652 3 33321 0 0 136
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013210 414 LVRMSVGYLGTLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 414 ~iRiS~g~~~~~~~~i~~l~~al~~~~~ 441 (447)
.+|||+| . +.+..+.|.++|+.+.+
T Consensus 303 ~iRis~~-~--~~~~~~~l~~al~~~~~ 327 (330)
T PRK05664 303 SLRFGLP-A--DEADWARLDQALLAYRK 327 (330)
T ss_pred eEEEECC-C--CHHHHHHHHHHHHHHHh
Confidence 8999999 5 34557788888877754
No 123
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.95 E-value=1.1e-25 Score=224.98 Aligned_cols=220 Identities=22% Similarity=0.285 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHhC----C-----CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 101 VLNLSRQMAALEG----T-----EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 101 ~~~l~~~ia~l~g----~-----~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
..++++.++++++ . +.+++|+|+++|+.+++++++.+||.|++..|.|+++...++ ..|.++..++
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~-----~~g~~~~~~~ 143 (391)
T PRK07309 69 LLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVN-----LVGAEIVEID 143 (391)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHH-----HcCCEEEEEe
Confidence 3578888888763 1 469999999999999999999999999999999999877663 2577777776
Q ss_pred CC------CHHHHHHhhcc--CCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------c-
Q 013210 172 IS------DHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------A- 233 (447)
Q Consensus 172 ~~------d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~- 233 (447)
.+ |+++++++++. +++++|++++|+||||.+.+ +++|+++|++||+++|+|++|..+.++. .
T Consensus 144 ~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~ 223 (391)
T PRK07309 144 TTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAE 223 (391)
T ss_pred cCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHH
Confidence 42 68899988832 36899999999999999986 7888999999999999999996654421 1
Q ss_pred -CCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCC-cHHHHHHHHHHHHH
Q 013210 234 -RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP-HLGLRMKEHCHRAL 311 (447)
Q Consensus 234 -~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~-~l~~~~~~~~~~~~ 311 (447)
..+..+++.|+||.+|.+|.|+ ||+++++++++.+..... ......+.+.+.++..++.... +.....+++.++++
T Consensus 224 ~~~~~~i~~~S~SK~~g~~GlRv-G~~v~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 301 (391)
T PRK07309 224 YLPDQTILINGLSKSHAMTGWRI-GLIFAPAEFTAQLIKSHQ-YLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRD 301 (391)
T ss_pred hccCCEEEEecChhhccCcccee-EEEEeCHHHHHHHHHHHh-hcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Confidence 1245699999999999999999 999999999988876543 2112233444444444444322 23334456788888
Q ss_pred HHHHHHHhCCCeeeCC
Q 013210 312 IFARRMKKLGLKVLYP 327 (447)
Q Consensus 312 ~l~~~L~~~~~~v~~p 327 (447)
.+.+.|++++..+..|
T Consensus 302 ~~~~~l~~~~~~~~~p 317 (391)
T PRK07309 302 YIIEKMTDLGFKIIKP 317 (391)
T ss_pred HHHHHHHHCCCeecCC
Confidence 9999998876555433
No 124
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.95 E-value=4.7e-26 Score=227.11 Aligned_cols=242 Identities=14% Similarity=0.189 Sum_probs=178.4
Q ss_pred HHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC-
Q 013210 102 LNLSRQMAALEG--------TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI- 172 (447)
Q Consensus 102 ~~l~~~ia~l~g--------~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~- 172 (447)
..+++.+|++++ .+++++|+|+++|+.+++.+++.+||+|+++.|.|+.+...+. ..|.++..++.
T Consensus 69 ~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~-----~~g~~~~~~~~~ 143 (384)
T PRK06348 69 VELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIE-----MVGGKPIILETY 143 (384)
T ss_pred HHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHH-----HcCCEEEEecCC
Confidence 468888887762 3569999999999999999999999999999999999988773 24666666543
Q ss_pred ------CCHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----cC----
Q 013210 173 ------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-----AR---- 234 (447)
Q Consensus 173 ------~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-----~~---- 234 (447)
.|+++|++++ ++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..+.++. ..
T Consensus 144 ~~~~~~~d~~~l~~~~-~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 222 (384)
T PRK06348 144 EEDGFQINVKKLEALI-TSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGM 222 (384)
T ss_pred cCcCCcCCHHHHHHhh-CcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCC
Confidence 2789999988 678999999999999999986 6788888999999999999996654321 11
Q ss_pred CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCc-HHHHHHHHHHHHHHH
Q 013210 235 LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPH-LGLRMKEHCHRALIF 313 (447)
Q Consensus 235 ~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~-l~~~~~~~~~~~~~l 313 (447)
.+..+++.||||.+|.+|.|+ ||+++++++++.+...+... ....+.+.+.++..++...+. +....+.++++++.+
T Consensus 223 ~~~vi~~~SfSK~~~l~GlRi-G~~v~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~ 300 (384)
T PRK06348 223 PERTITFGSFSKDFAMTGWRI-GYVIAPDYIIETAKIINEGI-CFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYA 300 (384)
T ss_pred cCcEEEEecchhccCCccccc-eeeecCHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 246799999999999999999 99999999988887665421 123344445555444443332 444555678888889
Q ss_pred HHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHhh
Q 013210 314 ARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYLQ 370 (447)
Q Consensus 314 ~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~l~~~l~ 370 (447)
.+.|++.+. .+..|. .|.++|+.++. ......+...+.
T Consensus 301 ~~~L~~~~~~~~~~p~-------------------gg~~~~~~~~~~~~~~~~l~~~l~ 340 (384)
T PRK06348 301 YKRIESIPNLSLHPPK-------------------GSIYAFINIKKTGLSSVEFCEKLL 340 (384)
T ss_pred HHHHhcCCCceeccCC-------------------eeEEEEEecccCCCCHHHHHHHHH
Confidence 999987632 333221 35577888862 222455665553
No 125
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=1.1e-26 Score=229.93 Aligned_cols=278 Identities=15% Similarity=0.193 Sum_probs=194.7
Q ss_pred chHHHHHHHHHHHhCCC--eEEE-eCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC--
Q 013210 99 PTVLNLSRQMAALEGTE--AAYC-TASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-- 173 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~--~~~~-tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-- 173 (447)
+...++++.+|+++|.+ .+++ ++|+++++..+++.++++||+|+++.|.|+.+...++ ..|.++..++.+
T Consensus 69 ~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~-----~~g~~~~~~~~~~~ 143 (361)
T PRK00950 69 PDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAK-----AHGAKPVYAKREED 143 (361)
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHH-----HcCCEEEEeecCCC
Confidence 33478999999999874 4777 6777888999998888999999999999988766552 257787777532
Q ss_pred ---CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCC-c----cCCCCeEEEeCCC
Q 013210 174 ---DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLS-P----ARLGADVVVHSIS 245 (447)
Q Consensus 174 ---d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~-~----~~~g~di~~~S~s 245 (447)
|++++++.+ ++++++|++++|+||||.+.|.+++.++|+++|+++|+|++|..+... . ...+..+++.|+|
T Consensus 144 ~~~~~~~l~~~~-~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~S 222 (361)
T PRK00950 144 FSLDVDSVLNAI-TEKTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFS 222 (361)
T ss_pred CCcCHHHHHHHh-ccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeeh
Confidence 789999988 678999999999999999999999999999999999999999554311 1 1224568899999
Q ss_pred ccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 013210 246 KFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVL 325 (447)
Q Consensus 246 K~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~ 325 (447)
|.+|.+|.|+ ||+++++++++.++..... ...+.+.+..+...+...+.+....+++.++++++.+.|. ..+
T Consensus 223 K~~g~~GlRi-G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~---~~~- 294 (361)
T PRK00950 223 KVFGLAGLRI-GYGFVPEWLIDYYMRAKTP---FSLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP---FKV- 294 (361)
T ss_pred HhhcCchhhc-chhcCCHHHHHHHHHhcCC---CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC---eeE-
Confidence 9999999999 9999999998888766541 1223333333334443333344444555666666666654 222
Q ss_pred CCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHH
Q 013210 326 YPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEK 405 (447)
Q Consensus 326 ~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~ 405 (447)
+|. .|.++++.++.. +...+.+.|... | +.+..|... +
T Consensus 295 ~~~-------------------~~~~i~~~~~~~-~~~~~~~~l~~~---g-v~v~~~~~f-----~------------- 332 (361)
T PRK00950 295 YPS-------------------EANFVLVDVTPM-TAKEFCEELLKR---G-VIVRDCTSF-----R------------- 332 (361)
T ss_pred CCC-------------------cceEEEEECCCC-CHHHHHHHHHHC---C-EEEeeCCcc-----C-------------
Confidence 221 345888888532 356777777652 3 344433110 0
Q ss_pred HhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 406 ALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 406 ~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+..+++||||++ . .+.++.+.++|+++
T Consensus 333 ---~~~~~~lRis~~-~---~~~~~~l~~~L~~i 359 (361)
T PRK00950 333 ---GLGDYYIRVSIG-T---FEENERFLEILKEI 359 (361)
T ss_pred ---CCCCCeEEEECC-C---HHHHHHHHHHHHHH
Confidence 123578999999 3 23466666666554
No 126
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=4.3e-26 Score=226.36 Aligned_cols=275 Identities=17% Similarity=0.179 Sum_probs=197.0
Q ss_pred HHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----C
Q 013210 102 LNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----D 174 (447)
Q Consensus 102 ~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d 174 (447)
..+++.+|+++|.+ .+++|+|+++++..++.+++++||+|++..|+|+.+...+. ..|.++..++.+ |
T Consensus 74 ~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~-----~~g~~~~~v~~~~~~~~~ 148 (371)
T PRK05166 74 RALREAIAARTGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPT-----MMGARVERVTVTPDLGFD 148 (371)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHH-----HcCCeEEEeecCCCCCCC
Confidence 47999999999864 59999999999999999999999999999999998876652 267888877654 7
Q ss_pred HHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHh--cCCEEEEeCCCCCCCCCc-----c----C-CCCeEEEe
Q 013210 175 HEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD--KGVTVVVDNTFSPLVLSP-----A----R-LGADVVVH 242 (447)
Q Consensus 175 ~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~--~gi~livD~~~~~~~~~~-----~----~-~g~di~~~ 242 (447)
++++++++ ++++++|++++|+||||.+++.+++.++++. +++++|+|++|..+.... . . ....+++.
T Consensus 149 ~~~l~~~~-~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~ 227 (371)
T PRK05166 149 LDALCAAV-ARAPRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLR 227 (371)
T ss_pred HHHHHHhh-hcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEe
Confidence 89999988 6788999999999999999998777776653 488999999995544221 0 1 13578999
Q ss_pred CCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCC
Q 013210 243 SISKFISGGADIIAGAVCG-PANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLG 321 (447)
Q Consensus 243 S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~ 321 (447)
||||.+|.+|.|+ ||++. ++++++.+...+.. ...+.+.+.++...+...+++....+.+.++++.+.+.|++++
T Consensus 228 SfSK~~~l~GlRi-G~~i~~~~~l~~~~~~~~~~---~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g 303 (371)
T PRK05166 228 TFSKAYGLAGLRV-GYGLVSDPELVGLLDRVRTP---FNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMG 303 (371)
T ss_pred echHhhhcchhhe-eeeecCCHHHHHHHHHhccC---CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCc
Confidence 9999999999999 99765 77888887765431 2223333334444443334455566778888899999999876
Q ss_pred CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCC
Q 013210 322 LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELN 401 (447)
Q Consensus 322 ~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~ 401 (447)
..+ .|. .|.++|+.++.. ...+.+.|... | +.+..|..
T Consensus 304 ~~~-~p~-------------------~g~fl~~~~~~~--~~~l~~~l~~~---g-i~v~p~~~---------------- 341 (371)
T PRK05166 304 YRI-APS-------------------RANFLFFDARRP--ASAVAEALLRQ---G-VIVKPWKQ---------------- 341 (371)
T ss_pred Cee-CCC-------------------cCCEEEEeCCCC--HHHHHHHHHHC---C-eEEecCCC----------------
Confidence 543 232 356888887532 35666666642 3 34443310
Q ss_pred HHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 402 AEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 402 ~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
.+ .++++|||++ . .+..+.|.++|+.+
T Consensus 342 ------~~-~~~~iRi~~~-~---~~~~~~l~~~l~~i 368 (371)
T PRK05166 342 ------PG-FETFIRVSIG-S---PEENDHFVAALDKV 368 (371)
T ss_pred ------CC-CCCeEEEEcC-C---HHHHHHHHHHHHHH
Confidence 01 1478999999 4 23355566666554
No 127
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.95 E-value=5.5e-26 Score=229.98 Aligned_cols=287 Identities=20% Similarity=0.222 Sum_probs=208.0
Q ss_pred HHHHHHHHHHh----C----CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC
Q 013210 102 LNLSRQMAALE----G----TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 173 (447)
Q Consensus 102 ~~l~~~ia~l~----g----~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~ 173 (447)
..|++.+++.+ | .++|++|+|+++|+.++++.++++||.|++.+|+|++....++ ..|.++..|+.|
T Consensus 135 ~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~-----~~g~~~~~vp~d 209 (459)
T COG1167 135 PELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALE-----ALGARVIPVPVD 209 (459)
T ss_pred HHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHH-----HcCCcEEecCCC
Confidence 45666666654 3 2569999999999999999999999999999999999998884 368888888776
Q ss_pred ----CHHHHHHhhccCCceEEEEE-cCCCCCccccCHH---HHHHHHHhcCCEEEEeCCCCCCCCCcc---------CCC
Q 013210 174 ----DHEMVNSAIVQGRTKVLYFE-SISNPTLAVANIP---ELSRLAHDKGVTVVVDNTFSPLVLSPA---------RLG 236 (447)
Q Consensus 174 ----d~~~l~~~i~~~~t~lV~i~-~~~NptG~v~~l~---~I~~la~~~gi~livD~~~~~~~~~~~---------~~g 236 (447)
|+++|++.+++.++++++++ +.+||||.+++++ +|.++|++||+++|.|+.|+.+.++.. ..+
T Consensus 210 ~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~ 289 (459)
T COG1167 210 EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPG 289 (459)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCC
Confidence 89999999965678999886 5689999999864 899999999999999999977765422 127
Q ss_pred CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHc-c--CCcHHHHHHHHHHHHHHH
Q 013210 237 ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSE-R--IPHLGLRMKEHCHRALIF 313 (447)
Q Consensus 237 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~-~--~~~l~~~~~~~~~~~~~l 313 (447)
.+++++||||.+. ||.|+ ||+++++++++.+...+.. ....++...+...+..+. + .+++....+.+.++++.+
T Consensus 290 rViy~gSFSK~l~-PglRl-G~vv~p~~~~~~~~~~k~~-~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l 366 (459)
T COG1167 290 RVIYLGSFSKTLA-PGLRL-GYVVAPPELIEKLLRLKQA-ADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDAL 366 (459)
T ss_pred CEEEEeeehhhcc-cccce-eeeeCCHHHHHHHHHHHHH-hcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999 89999 9999999999988776652 223334444443333333 2 133444555688999999
Q ss_pred HHHHHhCCC---eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccc-cCccccc
Q 013210 314 ARRMKKLGL---KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSL-GYYETLM 389 (447)
Q Consensus 314 ~~~L~~~~~---~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~-G~~~s~~ 389 (447)
.+.|.++.. .+..|. .|.++|+.++...+...+...+... | +.+.. |.....
T Consensus 367 ~~~L~~~~~~~~~~~~p~-------------------gG~flwl~l~~~~~~~~l~~~a~~~---g-v~i~~~g~~f~~- 422 (459)
T COG1167 367 LEALAEYLPELATWTRPE-------------------GGLFLWLELPEGIDARELLAAALEK---G-VVVTPLGSAFSA- 422 (459)
T ss_pred HHHHHHhCCCCeeeecCC-------------------ceEEEEEEcCCCCCHHHHHHHHHHC---C-CEEEcCCccccC-
Confidence 999988742 444443 5779999999654456676666642 3 23333 422110
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 390 SCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 390 ~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
. +-..+.+|||++ ..+.+++.+.+....+.+
T Consensus 423 ----~--------------~~~~~~~Rl~~s-~~~~e~i~~gi~~l~~~~ 453 (459)
T COG1167 423 ----D--------------GDPRNGLRLSFS-SPSEEEIEEGIKRLAALL 453 (459)
T ss_pred ----C--------------CCCCCeEEEEcC-CCCHHHHHHHHHHHHHHH
Confidence 0 012468999999 766665555554444333
No 128
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.95 E-value=7.2e-26 Score=227.15 Aligned_cols=243 Identities=15% Similarity=0.164 Sum_probs=175.1
Q ss_pred chHHHHHHHHHHHhCC--------CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEe
Q 013210 99 PTVLNLSRQMAALEGT--------EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 170 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~--------~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v 170 (447)
.....+++.+|++++. +++++|+|+++|+.+++.+++.+||+|+++.|+|..+...+. ..|.++..+
T Consensus 73 ~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~~~~~ 147 (403)
T TIGR01265 73 VGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAA-----FSGLEVRLY 147 (403)
T ss_pred CCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHH-----HcCCEEEEe
Confidence 3356789999999873 459999999999999999999999999999999998766552 257777766
Q ss_pred CC-------CCHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------cC
Q 013210 171 DI-------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------AR 234 (447)
Q Consensus 171 ~~-------~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~~ 234 (447)
+. .|++++++++ ++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..+.++. ..
T Consensus 148 ~~~~~~~~~~d~~~l~~~~-~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 226 (403)
T TIGR01265 148 DLLPEKDWEIDLDGLEALA-DEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMAS 226 (403)
T ss_pred cCCcccCCccCHHHHHHHh-CcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhh
Confidence 53 2789999988 778999999999999999986 7899999999999999999997664431 11
Q ss_pred C---CCeEEEeCCCccccCCCCeeEEEEEcC--hH-----HHHHHHHHhhhhhhhcCCCccHHHHHHHHcc--CCcHHHH
Q 013210 235 L---GADVVVHSISKFISGGADIIAGAVCGP--AN-----LVNSMMDLHQGALMLLGPTMNPKVAFELSER--IPHLGLR 302 (447)
Q Consensus 235 ~---g~di~~~S~sK~~g~~g~~igG~l~~~--~~-----~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~--~~~l~~~ 302 (447)
+ ...+++.|+||.|+.+|.|+ ||++.+ ++ +++.+...... ....+.+.+.++..++.. ..++...
T Consensus 227 ~~~~~~vi~~~S~SK~~~~pGlRi-G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~ 303 (403)
T TIGR01265 227 FASIVPVLSLGGISKRWVVPGWRL-GWIIIHDPHGIFRDTVLQGLKNLLQR--ILGPATIVQGALPDILENTPQEFFDGK 303 (403)
T ss_pred hccCCcEEEEeecccccCCCcceE-EEEEEeCchhhhHHHHHHHHHHHhhh--hcCCChHHHHHHHHHHHhChHHHHHHH
Confidence 1 24689999999999999999 898763 23 33333333220 022233444444444432 1345566
Q ss_pred HHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-----HHHHHHHHHh
Q 013210 303 MKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-----EKANRLMNYL 369 (447)
Q Consensus 303 ~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-----~~~~~l~~~l 369 (447)
.+++.++++.+.+.|+.++ ..+..|. .|.++|+.++.. .....+.+.+
T Consensus 304 ~~~~~~~~~~l~~~L~~~~~~~~~~p~-------------------~g~f~~~~~~~~~~~~~~~~~~~~~~l 357 (403)
T TIGR01265 304 ISVLKSNAELCYEELKDIPGLVCPKPE-------------------GAMYLMVKLELELFPEIKDDVDFCEKL 357 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCceecCCC-------------------ceeEEEEeccccccCCCCCHHHHHHHH
Confidence 7778888999999998763 3433332 567999988632 1244565654
No 129
>PRK07337 aminotransferase; Validated
Probab=99.95 E-value=1.4e-25 Score=224.20 Aligned_cols=283 Identities=20% Similarity=0.261 Sum_probs=198.5
Q ss_pred HHHHHHHHHHHh----C----CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 101 VLNLSRQMAALE----G----TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 101 ~~~l~~~ia~l~----g----~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
..++++.+|+++ | .+++++|+|+++|+.+++.+++++||+|+++.|+|+++...+. ..|.++..++.
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~~~~~~~ 143 (388)
T PRK07337 69 LAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVA-----AAEGRPVLVPS 143 (388)
T ss_pred CHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHH-----HcCCEEEEeec
Confidence 467888888886 3 2569999999999999999999999999999999999876663 24666666654
Q ss_pred C-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----cCCC-
Q 013210 173 S-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-----ARLG- 236 (447)
Q Consensus 173 ~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-----~~~g- 236 (447)
+ |++++++.+ ++++++|++++|+||||.+.+ +++|+++|+++++++|+|++|..+.++. ..++
T Consensus 144 ~~~~~~~~~~~~l~~~~-~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 222 (388)
T PRK07337 144 GPAERFQLTAADVEAAW-GERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGD 222 (388)
T ss_pred CCccCCcCCHHHHHhhc-CccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccC
Confidence 2 789999988 778999999999999999986 6788899999999999999996554321 1222
Q ss_pred CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHcc--CCcHHHHHHHHHHHHHHHH
Q 013210 237 ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER--IPHLGLRMKEHCHRALIFA 314 (447)
Q Consensus 237 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~--~~~l~~~~~~~~~~~~~l~ 314 (447)
..+++.|+||.+|.+|.|+ ||+++++++++.+....... ....+.+.+.++..++.. ...+.+..++++++++.+.
T Consensus 223 ~vi~~~S~SK~~~~~G~Ri-G~~~~~~~l~~~l~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~ 300 (388)
T PRK07337 223 DVITINSFSKYFNMTGWRL-GWLVVPEALVGTFEKLAQNL-FICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIV 300 (388)
T ss_pred CEEEEEechhhcCCchhhe-eeeecCHHHHHHHHHHHHHh-ccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHH
Confidence 3467899999999999998 99999999988887765421 122334444444444432 2334455566788899999
Q ss_pred HHHHhCCCee-eCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-----HHHHHHHHHh-hcccccccccccccCccc
Q 013210 315 RRMKKLGLKV-LYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-----EKANRLMNYL-QNYAQFGFMAVSLGYYET 387 (447)
Q Consensus 315 ~~L~~~~~~v-~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-----~~~~~l~~~l-~~~~~~g~~~vs~G~~~s 387 (447)
+.|++++..+ ..|. .|.++|+.++.. .....|...+ .. .| +.+..|....
T Consensus 301 ~~L~~~~~~~~~~p~-------------------~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~---~g-v~v~pg~~f~ 357 (388)
T PRK07337 301 PALESLGFKVPVMPD-------------------GAFYVYADCRGVAHPAAGDSAALTQAMLHD---AG-VVLVPGRDFG 357 (388)
T ss_pred HHHHhcCCccccCCC-------------------eeEEEEEecccccCCCCCCHHHHHHHHHHh---CC-EEEeCchhhC
Confidence 9998876533 2232 466899998631 1244565553 33 23 3444442210
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 388 LMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 388 ~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
..-.++++|||++ . +. +.|.++++++.
T Consensus 358 --------------------~~~~~~~~Ri~~~-~-~~----~~l~~~l~rl~ 384 (388)
T PRK07337 358 --------------------PHAPRDYIRLSYA-T-SM----SRLEEAVARLG 384 (388)
T ss_pred --------------------CCCCCCEEEEEec-C-CH----HHHHHHHHHHH
Confidence 0012479999999 6 32 34555555554
No 130
>PLN02656 tyrosine transaminase
Probab=99.95 E-value=6.1e-26 Score=227.95 Aligned_cols=212 Identities=15% Similarity=0.158 Sum_probs=162.5
Q ss_pred HHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 101 VLNLSRQMAALEG--------TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 101 ~~~l~~~ia~l~g--------~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
..++++.++++++ .+.+++|+|+++|+.+++.+++++||+|++++|.|+.+..... ..|.++..++.
T Consensus 75 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~~~~i~~ 149 (409)
T PLN02656 75 LPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAA-----FRHLEVRYVDL 149 (409)
T ss_pred CHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHH-----HcCCEEEEEeC
Confidence 3578888888864 2569999999999999999999999999999999987765542 25777777664
Q ss_pred C-------CHHHHHHhhccCCceEEEEEcCCCCCcccc---CHHHHHHHHHhcCCEEEEeCCCCCCCCCcc---------
Q 013210 173 S-------DHEMVNSAIVQGRTKVLYFESISNPTLAVA---NIPELSRLAHDKGVTVVVDNTFSPLVLSPA--------- 233 (447)
Q Consensus 173 ~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~---~l~~I~~la~~~gi~livD~~~~~~~~~~~--------- 233 (447)
+ |++++++++ ++++++|++++|+||||.+. ++++|+++|+++|+++|+|++|..+.++..
T Consensus 150 ~~~~~~~~d~~~l~~~~-~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 228 (409)
T PLN02656 150 LPEKGWEVDLDAVEALA-DQNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFG 228 (409)
T ss_pred CCcCCCCCCHHHHHHHh-ccCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhc
Confidence 2 788999888 77899999999999999997 478889999999999999999976644311
Q ss_pred CCCCeEEEeCCCccccCCCCeeEEEEEcC--------hHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC--CcHHHHH
Q 013210 234 RLGADVVVHSISKFISGGADIIAGAVCGP--------ANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI--PHLGLRM 303 (447)
Q Consensus 234 ~~g~di~~~S~sK~~g~~g~~igG~l~~~--------~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~--~~l~~~~ 303 (447)
.....+++.||||.|+.+|+|+ ||++++ +++++.+...... ....+.+.+.++..++... ..+....
T Consensus 229 ~~~~vi~~~SfSK~f~~pGlRi-G~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~q~a~~~~l~~~~~~~~~~~~ 305 (409)
T PLN02656 229 SIVPVLTLGSLSKRWIVPGWRL-GWFVTTDPSGSFRDPKIVERIKKYFDI--LGGPATFIQAAVPTILEQTDESFFKKTI 305 (409)
T ss_pred ccCcEEEEcccchhccCcceeE-EEEEEeCcccccccHHHHHHHHHHHhh--hcCCCHHHHHHHHHHHhcCcHHHHHHHH
Confidence 1235789999999999999999 999873 5777777765441 1122334444554455421 2455666
Q ss_pred HHHHHHHHHHHHHHHhCC
Q 013210 304 KEHCHRALIFARRMKKLG 321 (447)
Q Consensus 304 ~~~~~~~~~l~~~L~~~~ 321 (447)
++++++++.+.+.|++++
T Consensus 306 ~~~~~~r~~~~~~L~~~~ 323 (409)
T PLN02656 306 NILKQSSDICCDRIKEIP 323 (409)
T ss_pred HHHHHHHHHHHHHHhhCC
Confidence 778888999999998764
No 131
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.95 E-value=2.5e-25 Score=222.07 Aligned_cols=311 Identities=16% Similarity=0.135 Sum_probs=215.1
Q ss_pred HHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHH
Q 013210 74 ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHA 153 (447)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~ 153 (447)
+.+.+.++. ++.+...+.+.+...+..+++++.++++++.+..+++++|++++..+++.++++||+|+++.+.|+.+..
T Consensus 60 ~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~ 138 (385)
T PRK05958 60 AAAQQAARR-YGAGSGGSRLVTGNSPAHEALEEELAEWFGAERALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLID 138 (385)
T ss_pred HHHHHHHHh-cCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHH
Confidence 555555543 2322222333334466788999999999998888888899999998888889999999999999998877
Q ss_pred HHHhhcCcccCeeEEEeCCCCHHHHHHhhccC--CceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCC
Q 013210 154 LLTHFFPRACNITTTFVDISDHEMVNSAIVQG--RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLS 231 (447)
Q Consensus 154 ~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~--~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~ 231 (447)
.+. ..|.++..++..|++++++.++.. +++++++++++|++|.+.++++|.++|++||+++|+|++|+...+.
T Consensus 139 ~~~-----~~g~~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~ 213 (385)
T PRK05958 139 GAR-----LSRARVRRYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLG 213 (385)
T ss_pred HHH-----hcCCceEEeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccC
Confidence 652 257788888888999999988332 4678888899999999999999999999999999999999432111
Q ss_pred -----------ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHH-HHHHHccCCcH
Q 013210 232 -----------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKV-AFELSERIPHL 299 (447)
Q Consensus 232 -----------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~-a~~~~~~~~~l 299 (447)
......++++.|+||+++++| |+++.++++.+.+...........+..+.+.+ +..++..++..
T Consensus 214 ~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~ 289 (385)
T PRK05958 214 PQGRGLAAEAGLAGEPDVILVGTLGKALGSSG----AAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRRE 289 (385)
T ss_pred CCCCchHHhhCCCCCCceEEEEechhhcccCC----cEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcC
Confidence 111235688999999998754 88888988887775443211111222222222 22233322222
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccc
Q 013210 300 GLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMA 379 (447)
Q Consensus 300 ~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~ 379 (447)
....+++.++++++.+.|++.+.++.. ..|++++|.+++......+.+.|... | +.
T Consensus 290 ~~~~~~~~~~~~~l~~~L~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~l~~~---g-I~ 345 (385)
T PRK05958 290 PERRERLAALIARLRAGLRALGFQLMD--------------------SQSAIQPLIVGDNERALALAAALQEQ---G-FW 345 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCC--------------------CCCCEEEEEeCCHHHHHHHHHHHHHC---C-ce
Confidence 446677888999999999887654321 13568899987654567788888752 3 44
Q ss_pred ccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 380 VSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 380 vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
++.+.. +.. ....+.+|||++ ...+++.++.+.++|+++
T Consensus 346 v~~~~~------~~~--------------~~~~~~lRis~~-~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 346 VGAIRP------PTV--------------PAGTSRLRITLT-AAHTEADIDRLLEALAEA 384 (385)
T ss_pred EecccC------CCC--------------CCCCceEEEEec-CCCCHHHHHHHHHHHHhc
Confidence 433211 000 012368999999 878888888888887653
No 132
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=3.2e-26 Score=225.87 Aligned_cols=278 Identities=15% Similarity=0.198 Sum_probs=195.8
Q ss_pred CCCCchHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhcCCC-CeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 95 RHFNPTVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLCSSG-GHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 95 r~~~~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
++..+...+|++.+|+++|.+ .+++|+|+++++.+++++++++| |+|+++.|.|+.+...+. ..|.++..++
T Consensus 56 ~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~-----~~g~~v~~v~ 130 (354)
T PRK04635 56 RYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAE-----TFNVGVKALP 130 (354)
T ss_pred cCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHH-----HcCCEEEEEe
Confidence 344444678999999999874 49999999999999999999888 899999999998776552 2677888776
Q ss_pred CC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHh-cCCEEEEeCCCCCCCCC--c----cCCCCeE
Q 013210 172 IS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD-KGVTVVVDNTFSPLVLS--P----ARLGADV 239 (447)
Q Consensus 172 ~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~-~gi~livD~~~~~~~~~--~----~~~g~di 239 (447)
.+ |++.++ .+ +++++|++++||||||.+.+.+++.++++. .++++|+||+|..+... . ......+
T Consensus 131 ~~~~~~~~~~~l~-~~--~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~i 207 (354)
T PRK04635 131 LTADYQLPLDYIE-QL--DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLV 207 (354)
T ss_pred cCCCCCCCHHHHH-hc--cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEE
Confidence 54 567675 33 579999999999999999999999999876 37999999999555321 1 1124568
Q ss_pred EEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHcc--CCcHHHHHHHHHHHHHHHHHHH
Q 013210 240 VVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER--IPHLGLRMKEHCHRALIFARRM 317 (447)
Q Consensus 240 ~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~--~~~l~~~~~~~~~~~~~l~~~L 317 (447)
++.|+||++|.+|.|+ ||+++++++++.+...... ...+...+.++...+.. .+.+.+..+++.++++.+.+.|
T Consensus 208 v~~S~SK~~~l~GlRl-G~~i~~~~~~~~l~~~~~~---~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L 283 (354)
T PRK04635 208 VLRTLSKAFALAGARC-GFTLANEELIEILMRVIAP---YPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAAL 283 (354)
T ss_pred EEechHHHhhhhHHHH-hhhhCCHHHHHHHHhhcCC---CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999 9999999999888765431 11122233333333322 2334455667888889999999
Q ss_pred HhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCcccccccccccc
Q 013210 318 KKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSST 396 (447)
Q Consensus 318 ~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~ 396 (447)
++++ .++. |. .|.++++.+++. ..+.+.|... | +.+..+ ..
T Consensus 284 ~~~~~~~~~-~~-------------------~g~f~~~~~~~~---~~~~~~l~~~---g-v~v~~~-----------~~ 325 (354)
T PRK04635 284 SMYGGAKVL-EG-------------------NGNYVLAKFDDV---DAVFKALWDA---G-IVARAY-----------KD 325 (354)
T ss_pred HhCCCceEC-CC-------------------CCcEEEEECCCH---HHHHHHHHHC---C-EEEEEC-----------CC
Confidence 9876 3443 22 245888888643 3455555542 3 333211 00
Q ss_pred CCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 397 SSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 397 ~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
...++++|||+| . .+.++.|.++|++
T Consensus 326 ------------~~~~~~lRis~~-~---~e~~~~l~~al~~ 351 (354)
T PRK04635 326 ------------PRLANCIRFSFS-N---RAETDKLIGLIRN 351 (354)
T ss_pred ------------CCCCCeEEEEeC-C---HHHHHHHHHHHHH
Confidence 001468999999 3 3556666666653
No 133
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.95 E-value=8.4e-26 Score=226.86 Aligned_cols=230 Identities=15% Similarity=0.177 Sum_probs=167.3
Q ss_pred HHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC
Q 013210 102 LNLSRQMAALEG--------TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 173 (447)
Q Consensus 102 ~~l~~~ia~l~g--------~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~ 173 (447)
.++++.+|++++ .+.+++|+|+++++.+++++++.+||.|+++.|+|+.+...+. ..|.++..++.+
T Consensus 77 ~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~-----~~g~~~~~~~~~ 151 (409)
T PLN00143 77 LPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAI-----FHHLEIRHFDLL 151 (409)
T ss_pred HHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHH-----HcCCEEEEEecc
Confidence 568888888862 2569999999999999999999999999999999999877663 257777666531
Q ss_pred -------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCcc---------C
Q 013210 174 -------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSPA---------R 234 (447)
Q Consensus 174 -------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~~---------~ 234 (447)
|+++|++++ +++++++++++||||||.+.+ +++|+++|++|++++|+||+|..+.++.. .
T Consensus 152 ~~~~~~~d~~~l~~~~-~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~ 230 (409)
T PLN00143 152 PEKGWEVDLDAVEAIA-DENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFAS 230 (409)
T ss_pred CCCCCcCCHHHHHHhc-ccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcc
Confidence 789999888 778999999999999999997 66888889999999999999976654211 1
Q ss_pred CCCeEEEeCCCccccCCCCeeEEEEEc--ChHHH------HHHHHHhhhhhhhcCCCccHHHHHHHHcc--CCcHHHHHH
Q 013210 235 LGADVVVHSISKFISGGADIIAGAVCG--PANLV------NSMMDLHQGALMLLGPTMNPKVAFELSER--IPHLGLRMK 304 (447)
Q Consensus 235 ~g~di~~~S~sK~~g~~g~~igG~l~~--~~~~~------~~l~~~~~~~~~~~g~~~~~~~a~~~~~~--~~~l~~~~~ 304 (447)
....+++.|+||.|+.+|.|+ ||+++ ++.++ +.+..... . ....+.+.+.++..++.. ..++.+..+
T Consensus 231 ~~~vi~~~SfSK~f~~pGlRv-G~~v~~~p~~~~~~~~~~~~~~~~~~-~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~ 307 (409)
T PLN00143 231 IVPVITLGSISKRWMIPGWGL-GWLVTCDPSGLLQICEIADSIKKALN-P-APFPPTFIQAAIPEILEKTTEDFFSKTIN 307 (409)
T ss_pred cCcEEEEccchhhcCCCccce-EEEEeeCchhhhhhHHHHHHHHHHHh-c-cCCCCchHHHHHHHHHhcChHHHHHHHHH
Confidence 135689999999999999999 99987 33333 22332222 0 112334444444444432 234566777
Q ss_pred HHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 305 EHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 305 ~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
+++++++.+.+.|++++.... + ..| ..|.++|+.++
T Consensus 308 ~~~~~~~~~~~~L~~~~~~~~-~---~~p-------------~gg~f~w~~l~ 343 (409)
T PLN00143 308 ILRAALAFCYDKLKEIPCIMC-P---QKA-------------EGAFFALVKLN 343 (409)
T ss_pred HHHHHHHHHHHHHhcCCCCCC-C---CCC-------------CeeEEEEEecc
Confidence 788888888888887643211 1 112 25678999986
No 134
>PLN02483 serine palmitoyltransferase
Probab=99.95 E-value=2.4e-25 Score=227.09 Aligned_cols=292 Identities=14% Similarity=0.159 Sum_probs=208.0
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHH
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEM 177 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 177 (447)
.+..+++|+.+|+++|.++.+++++|+.++..++.+++++||.|+++++.|+++...+ +..|++++.++.+|.++
T Consensus 145 ~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~-----~~~Ga~v~~~~~~d~~~ 219 (489)
T PLN02483 145 TKLHRELEELVARFVGKPAAIVFGMGYATNSTIIPALIGKGGLIISDSLNHNSIVNGA-----RGSGATIRVFQHNTPSH 219 (489)
T ss_pred cHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEcchhhHHHHHHH-----HHcCCeEEEEeCCCHHH
Confidence 5677899999999999988888888999999889999999999999999999987765 23688999998888888
Q ss_pred HHHhhcc------CCc-----e-EEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCC-----------CccC
Q 013210 178 VNSAIVQ------GRT-----K-VLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVL-----------SPAR 234 (447)
Q Consensus 178 l~~~i~~------~~t-----~-lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~-----------~~~~ 234 (447)
+++.+++ ++| + +|+++.+.|++|.+.++++|.++|++||+++++||+|+-... ....
T Consensus 220 le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~ 299 (489)
T PLN02483 220 LEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDP 299 (489)
T ss_pred HHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCc
Confidence 8776631 222 4 667788889999999999999999999999999999942111 1111
Q ss_pred CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCcc---HHHHHHHHc---c---CCcHHHHHHH
Q 013210 235 LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMN---PKVAFELSE---R---IPHLGLRMKE 305 (447)
Q Consensus 235 ~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~---~~~a~~~~~---~---~~~l~~~~~~ 305 (447)
.++|++++|+||++|+.| ||+++++++++.++...... ..+..++ .+.+..++. . .+...++.++
T Consensus 300 ~~~dI~~~SfSKs~g~~G----G~i~~~~~li~~l~~~~~~~--~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~ 373 (489)
T PLN02483 300 ADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKRTCPAH--LYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQ 373 (489)
T ss_pred ccCcEEEEecchhcccCc----eEEEcCHHHHHHHHHhCccc--cccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHH
Confidence 257999999999999754 99999999999887653311 1222222 112222221 1 1223456778
Q ss_pred HHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCc
Q 013210 306 HCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYY 385 (447)
Q Consensus 306 ~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~ 385 (447)
++++++++.+.|+++++.+..+. .++++++.+........+.+.|... | +.+...+
T Consensus 374 l~~~~~~l~~~L~~~G~~v~~~~-------------------~sp~~~l~l~~~~~~~~~~~~Ll~~---G-I~v~~~~- 429 (489)
T PLN02483 374 IRENSNFFRSELQKMGFEVLGDN-------------------DSPVMPIMLYNPAKIPAFSRECLKQ---N-VAVVVVG- 429 (489)
T ss_pred HHHHHHHHHHHHHHCCCcccCCC-------------------CCCEEEEEECCHHHHHHHHHHHHHC---C-cEEeeeC-
Confidence 99999999999998876544221 2347777776555566787777653 3 3333111
Q ss_pred cccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhcCC
Q 013210 386 ETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDSGV 444 (447)
Q Consensus 386 ~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~~~ 444 (447)
.|+.. ...+.+||+++ ..++++.++.+.++|+++.+..+
T Consensus 430 -----fp~~p--------------~~~~~vRi~is-a~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 430 -----FPATP--------------LLLARARICIS-ASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred -----CCCCC--------------CCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHhC
Confidence 12111 12367999999 87777878877777777654433
No 135
>PRK03321 putative aminotransferase; Provisional
Probab=99.95 E-value=2.3e-26 Score=226.86 Aligned_cols=241 Identities=16% Similarity=0.194 Sum_probs=182.6
Q ss_pred chHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC---
Q 013210 99 PTVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 173 (447)
+....+++.+|++++++ .+++|+|+++++..++..++++||+|+++.|.|..+...++ ..|.++..++.+
T Consensus 57 ~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~-----~~g~~~~~v~~~~~~ 131 (352)
T PRK03321 57 MGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPILVQ-----VAGATPVQVPLTPDH 131 (352)
T ss_pred CcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHH-----HcCCEEEEccCCCCC
Confidence 45688999999999864 59999999999999998889999999999999987765542 257787777764
Q ss_pred --CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHh--cCCEEEEeCCCCCCCCCc-----c----CCCCeEE
Q 013210 174 --DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD--KGVTVVVDNTFSPLVLSP-----A----RLGADVV 240 (447)
Q Consensus 174 --d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~--~gi~livD~~~~~~~~~~-----~----~~g~di~ 240 (447)
|++++++++ ++++++|++++|+||||.+.|.++|.++|+. +++++|+|++|..+.+.. . ..+..++
T Consensus 132 ~~~~~~l~~~~-~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~ 210 (352)
T PRK03321 132 THDLDAMAAAI-TDRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVV 210 (352)
T ss_pred CCCHHHHHHhh-ccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEE
Confidence 789999988 6789999999999999999999999999987 599999999996554321 1 1246789
Q ss_pred EeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhC
Q 013210 241 VHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKL 320 (447)
Q Consensus 241 ~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~ 320 (447)
+.|+||.+|.+|.|+ ||+++++++++.+..... ....+.+.+.++...+...+.+.++.++..+.++.+.+.|++.
T Consensus 211 ~~S~SK~~g~~GlRi-G~~v~~~~~~~~~~~~~~---~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~ 286 (352)
T PRK03321 211 LRTFSKAYGLAGLRV-GYAVGHPEVIAALRKVAV---PFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA 286 (352)
T ss_pred EecchHHhhhHHHhh-hhhcCCHHHHHHHHHhcC---CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999999999 999999999988876532 1223334444444444443445556666667777888899876
Q ss_pred CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 321 GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 321 ~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
+..+. | ..|.++++.++. ....+.+.|..
T Consensus 287 ~~~~~-~-------------------~~g~~i~i~l~~--~~~~~~~~l~~ 315 (352)
T PRK03321 287 GWTVP-P-------------------SQANFVWLPLGE--RTADFAAAAAE 315 (352)
T ss_pred CCccC-C-------------------CCCCEEEEeCCC--CHHHHHHHHHH
Confidence 54321 1 135688888853 24567777764
No 136
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=8.1e-26 Score=226.17 Aligned_cols=249 Identities=18% Similarity=0.189 Sum_probs=179.4
Q ss_pred HHHHHHHHHHh----C------CC-eEEEeCChHHHHHHHHHHhcCCCCe--EEEeCCCchhHHHHHHhhcCcccCeeEE
Q 013210 102 LNLSRQMAALE----G------TE-AAYCTASGMSAISSVLMQLCSSGGH--VVAARTLYGGTHALLTHFFPRACNITTT 168 (447)
Q Consensus 102 ~~l~~~ia~l~----g------~~-~~~~tsggt~A~~~al~~l~~~gd~--Vi~~~~~y~~~~~~~~~~~~~~~g~~~~ 168 (447)
.++++.+|+++ | .+ .+++|+|+++|+.++++.++++||+ |+++.|.|+.+...+. ..|.++.
T Consensus 67 ~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~-----~~g~~~~ 141 (393)
T TIGR03538 67 PELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAAL-----LAGAEPY 141 (393)
T ss_pred HHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHH-----hcCCeEE
Confidence 56888888876 2 22 5889999999999999999999986 9999999998877652 2677777
Q ss_pred EeCCC-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC----cc-
Q 013210 169 FVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS----PA- 233 (447)
Q Consensus 169 ~v~~~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~----~~- 233 (447)
.++.+ |++++++++ ..++++|++++|+||||.+.+ +++|+++|++||+++|+||+|..+.++ +.
T Consensus 142 ~v~~~~~~~~~~d~~~l~~~~-~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~ 220 (393)
T TIGR03538 142 FLNCTAENGFLPDFDAVPESV-WRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAG 220 (393)
T ss_pred EeeccccCCCCCCHHHHHHHH-hhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcC
Confidence 77652 678898887 568999999999999999997 678899999999999999999655432 10
Q ss_pred -----------CCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHH
Q 013210 234 -----------RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLR 302 (447)
Q Consensus 234 -----------~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~ 302 (447)
.....+++.|+||.++.+|.|+ ||+++++++++.+....... ....+...+.++...+...+.+...
T Consensus 221 ~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRv-G~~i~~~~l~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~ 298 (393)
T TIGR03538 221 LLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRS-GFVAGDAEILKAFLRYRTYH-GCAMPIPTQLASIAAWNDEQHVREN 298 (393)
T ss_pred HHHhcccccccccccEEEEecchhhcCCcccce-EEEecCHHHHHHHHHHHHhh-ccCcCHHHHHHHHHHhcChHHHHHH
Confidence 1234699999999999999999 99999999988887665411 1122233333333333332345556
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccc
Q 013210 303 MKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSL 382 (447)
Q Consensus 303 ~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~ 382 (447)
.+.++++++.+.+.|+++ ..+..| ..|.++|+.++. ....+.+.+.. +.| +.+..
T Consensus 299 ~~~~~~~~~~~~~~L~~~-~~~~~p-------------------~gg~f~~~~~~~--~~~~~~~~l~~--~~g-V~v~p 353 (393)
T TIGR03538 299 RALYREKFAAVLEILGQV-LDLELP-------------------DAGFYLWPKVPG--DDEAFARALYE--EEN-VTVLP 353 (393)
T ss_pred HHHHHHHHHHHHHHHHhh-CcccCC-------------------CeeEEEEEECCC--CHHHHHHHHHH--HCC-EEEeC
Confidence 667888888899998764 222222 256799999971 13456666532 123 45555
Q ss_pred c
Q 013210 383 G 383 (447)
Q Consensus 383 G 383 (447)
|
T Consensus 354 g 354 (393)
T TIGR03538 354 G 354 (393)
T ss_pred C
Confidence 5
No 137
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.95 E-value=1e-25 Score=232.49 Aligned_cols=216 Identities=15% Similarity=0.164 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHh------CC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 101 VLNLSRQMAALE------GT--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 101 ~~~l~~~ia~l~------g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
...||+.||+++ +. ++|++|+|+++++.+++.+++++||+|+++.|.|+.+...+. ..|.++..++.
T Consensus 187 ~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~-----~~g~~~v~~~~ 261 (517)
T PRK13355 187 LFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVN-----LAGGTAVHYRC 261 (517)
T ss_pred hHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHH-----HCCCEEEEeec
Confidence 568999999887 33 569999999999999999999999999999999999887663 25777766643
Q ss_pred C-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------cCC-
Q 013210 173 S-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------ARL- 235 (447)
Q Consensus 173 ~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~~~- 235 (447)
+ |+++|++++ ++++++|++++||||||.+.+ +++|+++|++||+++|+||+|..+.++. ..+
T Consensus 262 ~~~~~~~~d~~~l~~~~-~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~ 340 (517)
T PRK13355 262 DEQSEWYPDIDDIRSKI-TSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLA 340 (517)
T ss_pred CcccCCCCCHHHHHHhc-CcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhC
Confidence 2 789999988 788999999999999999998 7889999999999999999997665432 111
Q ss_pred -C-CeEEEeCCCccccCCCCeeEEEEE--cChHHH----HHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHH---HHH
Q 013210 236 -G-ADVVVHSISKFISGGADIIAGAVC--GPANLV----NSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGL---RMK 304 (447)
Q Consensus 236 -g-~di~~~S~sK~~g~~g~~igG~l~--~~~~~~----~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~---~~~ 304 (447)
+ ..+++.||||.|+.+|+|+ ||++ ++++++ +.+..... .....+.+.+.++..++........ ..+
T Consensus 341 ~~~~vi~~~S~SK~~~~~G~Ri-G~~i~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~ 417 (517)
T PRK13355 341 PDLFCVTFSGLSKSHMIAGYRI-GWMILSGNKRIAKDYIEGLNMLAN--MRLCSNVPAQSIVQTALGGHQSVKDYLVPGG 417 (517)
T ss_pred CCCeEEEEecchhhccCcccce-EEEEeeCchhhHHHHHHHHHHHhc--CcCCcChHHHHHHHHHhcCCccHHHHHHHHH
Confidence 1 2455699999999999999 9988 445443 33332221 1122334445555555543322222 233
Q ss_pred HHHHHHHHHHHHHHhC-CCeee
Q 013210 305 EHCHRALIFARRMKKL-GLKVL 325 (447)
Q Consensus 305 ~~~~~~~~l~~~L~~~-~~~v~ 325 (447)
++.++++++.+.|+++ +..+.
T Consensus 418 ~~~~~r~~l~~~L~~~~g~~~~ 439 (517)
T PRK13355 418 RVYEQRELVYNALNAIPGISAV 439 (517)
T ss_pred HHHHHHHHHHHHHhcCCCcccC
Confidence 4556678899999876 33443
No 138
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.5e-25 Score=224.85 Aligned_cols=212 Identities=17% Similarity=0.171 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHhCC----CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC----
Q 013210 101 VLNLSRQMAALEGT----EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI---- 172 (447)
Q Consensus 101 ~~~l~~~ia~l~g~----~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~---- 172 (447)
++.+.+.+++..|. +++++|+|+++|+..++.+++++||+|+++.|.|..+...+.. .+..+..++.
T Consensus 76 r~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~-----~~~~~~~v~~~~~~ 150 (402)
T PRK06107 76 RKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLA-----NDGTPVIVACPEEQ 150 (402)
T ss_pred HHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHH-----cCCEEEEecCCccc
Confidence 34455555555453 4599999999999999998899999999999999888766521 3334444433
Q ss_pred ---CCHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhc-CCEEEEeCCCCCCCCCc------cC-----
Q 013210 173 ---SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDK-GVTVVVDNTFSPLVLSP------AR----- 234 (447)
Q Consensus 173 ---~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~-gi~livD~~~~~~~~~~------~~----- 234 (447)
.|++++++++ ++++++|++++|+||||.+.+ +++|+++|+++ ++++|+|++|..+.++. ..
T Consensus 151 ~~~~~~~~l~~~~-~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~ 229 (402)
T PRK06107 151 GFKLTPEALEAAI-TPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPEL 229 (402)
T ss_pred CCCCCHHHHHhhc-CcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCc
Confidence 2678999988 678999999999999999986 56778888998 99999999996553321 11
Q ss_pred CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHcc-CCcHHHHHHHHHHHHHHH
Q 013210 235 LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-IPHLGLRMKEHCHRALIF 313 (447)
Q Consensus 235 ~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~~~l~~~~~~~~~~~~~l 313 (447)
.+..+++.|+||.++.+|.|+ ||+++++++++.+....... ....+.+.+.++..++.. ..++....+.+.++++.+
T Consensus 230 ~~~vi~~~S~SK~~~~pGlRi-G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 307 (402)
T PRK06107 230 RDRVLVTNGVSKTYAMTGWRI-GYAAGPADLIAAINKLQSQS-SSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYA 307 (402)
T ss_pred cCCEEEEeccchhhcCcccce-eeeecCHHHHHHHHHHHHhc-ccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 136799999999999999999 99999999999888766521 123344444455444432 334556667788999999
Q ss_pred HHHHHhC
Q 013210 314 ARRMKKL 320 (447)
Q Consensus 314 ~~~L~~~ 320 (447)
.+.|+++
T Consensus 308 ~~~L~~~ 314 (402)
T PRK06107 308 LALLNAI 314 (402)
T ss_pred HHHHhcC
Confidence 9999876
No 139
>PRK07550 hypothetical protein; Provisional
Probab=99.95 E-value=1.8e-25 Score=223.24 Aligned_cols=284 Identities=16% Similarity=0.155 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 101 VLNLSRQMAALEG--------TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 101 ~~~l~~~ia~l~g--------~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
..++|+.+++.++ .+.+++|+|+++|+..++.+++++||+|+++.|.|..+...+. ..|.++..++.
T Consensus 69 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~~~~v~~ 143 (386)
T PRK07550 69 LPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLD-----MLGIRPVYLPC 143 (386)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-----hcCCEEEEEec
Confidence 3566677776653 2569999999999999999999999999999999998877663 26888877775
Q ss_pred C-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC------ccC--
Q 013210 173 S-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS------PAR-- 234 (447)
Q Consensus 173 ~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~------~~~-- 234 (447)
+ |++++++++ +.++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+... ...
T Consensus 144 ~~~~~~~~~~~~l~~~~-~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~ 222 (386)
T PRK07550 144 DEGPGLLPDPAAAEALI-TPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADP 222 (386)
T ss_pred CCCcCCCCCHHHHHHHh-cccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCC
Confidence 3 678899988 678999999999999999987 779999999999999999998554321 111
Q ss_pred --CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCC-cHHHHHHHHHHHHH
Q 013210 235 --LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP-HLGLRMKEHCHRAL 311 (447)
Q Consensus 235 --~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~-~l~~~~~~~~~~~~ 311 (447)
....+++.|+||.+|.+|.|+ ||+++++++++.+....... ....+...+.++..++..++ ++....+++.++++
T Consensus 223 ~~~~~~i~~~S~SK~~g~~G~Ri-G~i~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 300 (386)
T PRK07550 223 DWDDTLVHLYSFSKSYALTGHRV-GAVVASPARIAEIEKFMDTV-AICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRD 300 (386)
T ss_pred CccccEEEEecchhhccCcccce-EeeecCHHHHHHHHHHHhhc-ccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 124688999999999999998 99999999988887655411 12223334444444444322 23344556788888
Q ss_pred HHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHhhcccccccccccccCccccc
Q 013210 312 IFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYLQNYAQFGFMAVSLGYYETLM 389 (447)
Q Consensus 312 ~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~ 389 (447)
.+.+.|++++ ..+ .| ..|.++|+.++. ..+...+...|.. +.| +.+..|...
T Consensus 301 ~l~~~L~~~~~~~~-~~-------------------~g~~~~~~~~~~~~~~~~~l~~~l~~--~~g-v~v~pg~~f--- 354 (386)
T PRK07550 301 AFRAVFARLPGWEL-LA-------------------SGAYFAYVRHPFPDRPSREVARRLAK--EAG-ILCLPGTMF--- 354 (386)
T ss_pred HHHHHHHhCCCcee-CC-------------------CceEEEEecCCCCCCCHHHHHHHHHH--hcC-EEEeCchhh---
Confidence 9999998762 222 11 135588888864 3335667666532 123 344444211
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 390 SCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 390 ~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
. ...++++|||++ ..+ ++.+++..+.|.+
T Consensus 355 -----~-------------~~~~~~iRis~~-~~~-~~~~~~~~~~l~~ 383 (386)
T PRK07550 355 -----G-------------PGQEGYLRLAFA-NAD-VAGIGELVERLRA 383 (386)
T ss_pred -----C-------------CCCCCEEEEEee-cCC-HHHHHHHHHHHHh
Confidence 0 012478999999 654 4444444444443
No 140
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=8.7e-26 Score=222.90 Aligned_cols=277 Identities=13% Similarity=0.111 Sum_probs=190.0
Q ss_pred hHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC----
Q 013210 100 TVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS---- 173 (447)
Q Consensus 100 ~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~---- 173 (447)
....+|+.+|++++. +.+++|+|+++++..+++++ .+|+ +++..|.|..+...++ ..|.++..++.+
T Consensus 56 ~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~~~~~~~~-----~~g~~~~~v~~~~~~~ 128 (356)
T PRK08056 56 EYRHLHQALARHHQVPASWILAGNGETESIFAVVSGL-KPRR-AMIVTPGFAEYRRALQ-----QVGCEIRRYSLREADG 128 (356)
T ss_pred cHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh-CCCC-EEEeCCCcHHHHHHHH-----HcCCeEEEEecccccC
Confidence 357899999999976 45999999999999999876 6675 7778899988876663 267787777643
Q ss_pred -CH-HHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-------cCCCCeEEE
Q 013210 174 -DH-EMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-------ARLGADVVV 241 (447)
Q Consensus 174 -d~-~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-------~~~g~di~~ 241 (447)
++ +++++.+ .+++++|++++|+||||.+.+ +++|+++|+++++++|+|++|..+.+.. ...+.++++
T Consensus 129 ~~~~~~~~~~~-~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~ 207 (356)
T PRK08056 129 WQLTDAILEAL-TPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVL 207 (356)
T ss_pred CCccHHHHHhc-cCCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEE
Confidence 22 3555666 678999999999999999998 7788999999999999999985554221 123578999
Q ss_pred eCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhC
Q 013210 242 HSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKL 320 (447)
Q Consensus 242 ~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~ 320 (447)
.|+||++|.+|.|+ ||++. ++++++.+...... ...+.+.+.++..++....++.+..++++++++++.+.|+++
T Consensus 208 ~S~SK~~~~~G~Ri-G~~v~~~~~~~~~l~~~~~~---~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 283 (356)
T PRK08056 208 RSLTKFYAIPGLRL-GYLVNSDDAAVARMRRQQMP---WSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCAL 283 (356)
T ss_pred EechhhccCcchhh-eeeecCCHHHHHHHHHhCCC---CchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999 99987 46777777654321 111222233333333322334445567888999999999876
Q ss_pred CC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCC
Q 013210 321 GL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSE 399 (447)
Q Consensus 321 ~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~ 399 (447)
+. .+. |. .|+++++.++.. ...+.+.|... | +.+..|...
T Consensus 284 ~~~~~~-~~-------------------~~~~~~~~~~~~--~~~~~~~l~~~---g-I~v~~~~~f------------- 324 (356)
T PRK08056 284 PLLTVW-PG-------------------RANYLFLRCERP--DIDLQRALLTQ---R-ILIRSCANY------------- 324 (356)
T ss_pred CCcEEc-CC-------------------CCcEEEEEcCCC--hHHHHHHHHHC---C-eEEEECCCC-------------
Confidence 33 332 22 356888888632 34566666642 3 444444211
Q ss_pred CCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 400 LNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 400 ~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
.+...++||||++ . .+..+.|.++|+++
T Consensus 325 --------~~~~~~~iRis~~-~---~~~~~~l~~~l~~~ 352 (356)
T PRK08056 325 --------PGLDSRYYRVAIR-S---AAENERLLAALRNV 352 (356)
T ss_pred --------CCCCCCEEEEEEc-C---HHHHHHHHHHHHHH
Confidence 0223478999999 4 23334555555444
No 141
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.95 E-value=3.6e-25 Score=207.19 Aligned_cols=294 Identities=19% Similarity=0.196 Sum_probs=205.8
Q ss_pred ccccCCCCchHHHHHHHHHHHhC----CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCee
Q 013210 91 FIYSRHFNPTVLNLSRQMAALEG----TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNIT 166 (447)
Q Consensus 91 ~~~~r~~~~~~~~l~~~ia~l~g----~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 166 (447)
|-|..........+....++-.+ .+.++|+++..-++..+++++.++||.|++..|.|++++.... ..|.+
T Consensus 56 fGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~-----~n~R~ 130 (388)
T COG1168 56 FGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIK-----LNGRK 130 (388)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCeeEecCCCchHHHHHHh-----hcCcE
Confidence 44553333344555555555544 3569999999999999999999999999999999999998884 24555
Q ss_pred EEEeCCC--------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCccC-
Q 013210 167 TTFVDIS--------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSPAR- 234 (447)
Q Consensus 167 ~~~v~~~--------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~~~- 234 (447)
+...|.. |+++||+++..++++++++|+|+||+|.+.. |.+|.++|.+||+++|+||.|+++.+....
T Consensus 131 ~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h 210 (388)
T COG1168 131 VIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKH 210 (388)
T ss_pred EEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCc
Confidence 5555432 9999999997777899999999999999984 888999999999999999999877654311
Q ss_pred -----C-----CCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCC-ccHHHHHHHHc-cCCcHHHH
Q 013210 235 -----L-----GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPT-MNPKVAFELSE-RIPHLGLR 302 (447)
Q Consensus 235 -----~-----g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~-~~~~~a~~~~~-~~~~l~~~ 302 (447)
+ ...+.+.|.||.|+.+|..++-+++.++++..++.+...... ..+.+ ++..+...+.+ +-+++.+.
T Consensus 211 ~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~-~~~~n~lg~~A~~aAY~~G~~WLd~L 289 (388)
T COG1168 211 IPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNG-LHGPSALGIIATEAAYNQGEPWLDEL 289 (388)
T ss_pred cchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHHhc-CCCCchHHHHHHHHHHHhchHHHHHH
Confidence 1 456889999999999999874444566666444433222111 23333 33333333333 44668888
Q ss_pred HHHHHHHHHHHHHHHHhC-C-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC----CHHHHHH-HHHHhhccccc
Q 013210 303 MKEHCHRALIFARRMKKL-G-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME----TEEKANR-LMNYLQNYAQF 375 (447)
Q Consensus 303 ~~~~~~~~~~l~~~L~~~-~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~----~~~~~~~-l~~~l~~~~~~ 375 (447)
.+-++.+++++.+.|.++ | .++..|. ...++|+.+. +.+..+. +++..+
T Consensus 290 ~~yl~~N~~~~~~~l~~~~P~v~v~~p~-------------------gTYL~WLD~r~l~l~d~~l~~~ll~~ak----- 345 (388)
T COG1168 290 LEYLKDNRDYVADFLNKHLPGVKVTEPQ-------------------GTYLAWLDCRELGLDDSELAEFLLEEAK----- 345 (388)
T ss_pred HHHHHHHHHHHHHHHHhhCCCcEEecCC-------------------CceeeeeeccccCCChHHHHHHHHHhhc-----
Confidence 888999999999999876 3 3777665 3348999886 2222333 333333
Q ss_pred ccccccccCccccccccccccCCCCCHHHHHhcCC-CCCeEEEEeCCC--CCHHHHHHHHHHHHHHh
Q 013210 376 GFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGI-SAGLVRMSVGYL--GTLDQRWSQFEKALSRM 439 (447)
Q Consensus 376 g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~-~~~~iRiS~g~~--~~~~~~i~~l~~al~~~ 439 (447)
++++.|.. .|. ..+++|+.++ . ...++.++.+.++|+++
T Consensus 346 --Val~~G~~----------------------FG~~g~gf~RlN~a-cpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 346 --VALSPGST----------------------FGEEGSGFVRLNFA-CPRAILEEALERLKRALKKR 387 (388)
T ss_pred --EeccCCCc----------------------cCcCCCceEEEecC-CCHHHHHHHHHHHHHHHhcc
Confidence 57777732 122 2589999999 5 55666666776666543
No 142
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.95 E-value=1.3e-25 Score=219.24 Aligned_cols=277 Identities=17% Similarity=0.158 Sum_probs=199.3
Q ss_pred ccCCCCchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEe
Q 013210 93 YSRHFNPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 170 (447)
Q Consensus 93 ~~r~~~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v 170 (447)
+.++.++...++|+.+|+++|. +.+++|+|+++++..++.. +.+| +|+++.|+|..+...+. . .|+++..+
T Consensus 41 ~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~-l~~g-~vl~~~p~y~~~~~~~~----~-~g~~~~~~ 113 (330)
T TIGR01140 41 WARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRL-LAPG-RVLVLAPTYSEYARAWR----A-AGHEVVEL 113 (330)
T ss_pred HhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH-hCCC-eEEEeCCCcHHHHHHHH----H-cCCEEEEe
Confidence 3444555568999999999986 5699999999999997655 5677 79999999998877763 2 68888888
Q ss_pred CCCCHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc--c----CCCCeEEE
Q 013210 171 DISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP--A----RLGADVVV 241 (447)
Q Consensus 171 ~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~--~----~~g~di~~ 241 (447)
+ |++++++.+ + ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..+.... . ..+.++++
T Consensus 114 ~--d~~~l~~~~-~-~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~ 189 (330)
T TIGR01140 114 P--DLDRLPAAL-E-ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVL 189 (330)
T ss_pred C--CHHHHHhhc-c-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEE
Confidence 7 899999988 4 5789999999999999998 6677888899999999999995544321 1 12578999
Q ss_pred eCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCC
Q 013210 242 HSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLG 321 (447)
Q Consensus 242 ~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~ 321 (447)
.|+||.+|++|.|+ ||+++++++++.+...... ...+.+++.++...+..........++++++++.+.+.|++++
T Consensus 190 ~S~SK~~g~~G~R~-G~i~~~~~~~~~l~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 265 (330)
T TIGR01140 190 RSLTKFFGLAGLRL-GFVVAHPALLARLREALGP---WTVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLG 265 (330)
T ss_pred EecchhhcCchhhh-hheeCCHHHHHHHHhcCCC---CCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999998 9999999998888766541 2223333333433443333344556778999999999999886
Q ss_pred C-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCC
Q 013210 322 L-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSEL 400 (447)
Q Consensus 322 ~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~ 400 (447)
. ++ .| +.|.++|+.+++. ..+.+.|... | +.+..|... +
T Consensus 266 ~~~~-~~-------------------~~~~f~~~~~~~~---~~l~~~l~~~---g-i~v~pg~~f-----~-------- 305 (330)
T TIGR01140 266 GLEV-VG-------------------GTALFLLVRTPDA---AALHEALARR---G-ILIRDFDNF-----P-------- 305 (330)
T ss_pred CceE-CC-------------------CCCeEEEEEcCCH---HHHHHHHHHC---C-EEEEECCCC-----C--------
Confidence 4 32 22 2456888888753 4566676652 3 444444221 0
Q ss_pred CHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013210 401 NAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 436 (447)
Q Consensus 401 ~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 436 (447)
+...++|||+++ ..+ +. +.|.++|
T Consensus 306 --------~~~~~~iRi~~~-~~~--~~-~~~~~~l 329 (330)
T TIGR01140 306 --------GLDPRYLRFALP-TDE--EN-DRLEEAL 329 (330)
T ss_pred --------CCCCCEEEEEec-CHH--HH-HHHHHhh
Confidence 223468999999 433 33 6666554
No 143
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.9e-25 Score=223.89 Aligned_cols=240 Identities=19% Similarity=0.263 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHh-------CCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC
Q 013210 101 VLNLSRQMAALE-------GTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 173 (447)
Q Consensus 101 ~~~l~~~ia~l~-------g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~ 173 (447)
..++++.+++++ ..+.+++|+|+++|+.+++..++++||+|+++.|.|..+...++ ..|.++..++.+
T Consensus 68 ~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-----~~g~~~~~v~~~ 142 (397)
T PRK07568 68 IPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFAT-----SAGVKIVPVTTK 142 (397)
T ss_pred CHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHH-----HcCCEEEEeecC
Confidence 467889999886 24569999999999999999989999999999999988766552 257777766542
Q ss_pred --------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------cC--
Q 013210 174 --------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------AR-- 234 (447)
Q Consensus 174 --------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~~-- 234 (447)
++++|++++ ++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+.++. ..
T Consensus 143 ~~~g~~~~~~~~l~~~~-~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~ 221 (397)
T PRK07568 143 IEEGFHLPSKEEIEKLI-TPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLE 221 (397)
T ss_pred cccCCCCCCHHHHHHhc-CccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcC
Confidence 468899888 778999999999999999985 7889999999999999999996554321 11
Q ss_pred --CCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC-CcHHHHHHHHHHHH
Q 013210 235 --LGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKEHCHRA 310 (447)
Q Consensus 235 --~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~~~~~~ 310 (447)
.+..+++.|+||.+|++|.|+ ||+++ ++++++.+...... ....+.+.+.++..++... .++....+.+++++
T Consensus 222 ~~~~~~i~~~S~SK~~~~~G~R~-G~~~~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 298 (397)
T PRK07568 222 GLEDRVIIIDSVSKRYSACGARI-GCLISKNKELIAAAMKLCQA--RLSPPTLEQIGAAALLDTPESYFDEVREEYKKRR 298 (397)
T ss_pred CCcCCEEEEecchhhccCCCcce-EEEecCCHHHHHHHHHHhhc--cCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 135689999999999999999 88887 46787777554331 1233444454544444432 33455566788899
Q ss_pred HHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHh
Q 013210 311 LIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYL 369 (447)
Q Consensus 311 ~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l 369 (447)
+.+.+.|++++. .+..|. .|.++++.++.. ....+.+.+
T Consensus 299 ~~l~~~L~~~~~~~~~~p~-------------------g~~~~~~~l~~~-~~~~~~~~l 338 (397)
T PRK07568 299 DILYEELNKIPGVVCEKPK-------------------GAFYIIAKLPVD-DAEDFAKWL 338 (397)
T ss_pred HHHHHHHhcCCCceecCCC-------------------cceEEEEecCCC-CHHHHHHHH
Confidence 999999987632 333222 345678888742 234555554
No 144
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.95 E-value=3.4e-25 Score=220.62 Aligned_cols=302 Identities=15% Similarity=0.144 Sum_probs=206.3
Q ss_pred cccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 92 IYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 92 ~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
.||+.. ...+||+++|+++|.+..+++++|+.|+..++.+++++||+|+++++.|+++...+. ..+.++.+++
T Consensus 38 ~yg~~~--~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~~~GD~Vl~~~~~h~s~~~~~~-----l~~~~~~~~~ 110 (392)
T PLN03227 38 FYGTID--AHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFAKRGDLLVVDRGVNEALLVGVS-----LSRANVRWFR 110 (392)
T ss_pred ccCChH--HHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHH-----HcCCeEEEeC
Confidence 377755 678999999999999999999999999999999999999999999999999877651 1345777777
Q ss_pred CCCHHHHHH---hhc----------cCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCC-CCCC-------
Q 013210 172 ISDHEMVNS---AIV----------QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PLVL------- 230 (447)
Q Consensus 172 ~~d~~~l~~---~i~----------~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~~~------- 230 (447)
..|.+++++ .+. ++++++|++|+++|++|.+.|+++|.++|++||+++|+||+|+ +...
T Consensus 111 ~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~ 190 (392)
T PLN03227 111 HNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSL 190 (392)
T ss_pred CCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHH
Confidence 766666555 331 1368999999999999999999999999999999999999994 1111
Q ss_pred -----CccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHH---HHHHHHccCCcHHHH
Q 013210 231 -----SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPK---VAFELSERIPHLGLR 302 (447)
Q Consensus 231 -----~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~---~a~~~~~~~~~l~~~ 302 (447)
.| ..++|+++.|++|.+|+. ||++++++++++.++....+. .++.+.++. ++..++........+
T Consensus 191 ~~~g~~p-~~~~Div~~slsk~~g~~----gg~v~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~aa~~al~~~~~~~~~ 263 (392)
T PLN03227 191 EHAGLKP-MVHAEIVTFSLENAFGSV----GGMTVGSEEVVDHQRLSGSGY--CFSASAPPFLAKADATATAGELAGPQL 263 (392)
T ss_pred HHcCCCC-CCCceEEEeechhhhhcc----CcEEecCHHHHHHHHHhCcCc--cccCCCCHHHHHHHHHHHHHHhcCHHH
Confidence 11 236799999999998844 488889988887765433211 334443332 222233222223457
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeeCC---CCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHH---------HHHHHHHhh
Q 013210 303 MKEHCHRALIFARRMKKLGLKVLYP---GLEDHPHHELLKSMANKEYGFGGLLCLDMETEEK---------ANRLMNYLQ 370 (447)
Q Consensus 303 ~~~~~~~~~~l~~~L~~~~~~v~~p---~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~---------~~~l~~~l~ 370 (447)
.+++.++.++|.+.|++.+...... ++.-.. ...|.++.+.+.+... ...+.+.+.
T Consensus 264 ~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~------------~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (392)
T PLN03227 264 LNRLHDSIANLYSTLTNSSHPYALKLRNRLVITS------------DPISPIIYLRLSDQEATRRTDETLILDQIAHHSL 331 (392)
T ss_pred HHHHHHHHHHHHHHHHhcCCccccccccccccCC------------CCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHH
Confidence 7788999999999998643211000 100000 0246799999975322 236666666
Q ss_pred cccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 371 NYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 371 ~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
. .|++....|.. .....+ -+++..||+++. ..+++++++.+.++|+++.
T Consensus 332 ~---~Gi~~~~~~~~-~~~~~~----------------~~P~~~iR~~~~-~~~t~eei~~~~~~l~~~~ 380 (392)
T PLN03227 332 S---EGVAVVSTGGH-VKKFLQ----------------LVPPPCLRVVAN-ASHTREDIDKLLTVLGEAV 380 (392)
T ss_pred H---CCCEEEecccc-cCCcCC----------------CCCCceEEEEec-CCCCHHHHHHHHHHHHHHH
Confidence 5 34333223311 000011 123567999999 9888888888777777654
No 145
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.95 E-value=1.8e-25 Score=228.81 Aligned_cols=219 Identities=18% Similarity=0.157 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhc-CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 101 VLNLSRQMAALEG--------TEAAYCTASGMSAISSVLMQLC-SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 101 ~~~l~~~ia~l~g--------~~~~~~tsggt~A~~~al~~l~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
..++|+.||++++ .+++++|+|+++|+.+++++++ ++||.|+++.|.|+.+...+. ..|.++..++
T Consensus 117 ~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~-----~~g~~~v~v~ 191 (481)
T PTZ00377 117 YPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAIT-----LLGGKQVPYY 191 (481)
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHH-----HcCCEEEEEE
Confidence 4578888888863 3569999999999999999998 799999999999999988773 2566666665
Q ss_pred CC-------CHHHHHHhhcc-----CCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC---cc
Q 013210 172 IS-------DHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS---PA 233 (447)
Q Consensus 172 ~~-------d~~~l~~~i~~-----~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~---~~ 233 (447)
.+ |+++|++++.. .++++|++++|+||||.+++ +++|+++|++||+++|+||+|..+.++ +.
T Consensus 192 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~ 271 (481)
T PTZ00377 192 LDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPF 271 (481)
T ss_pred eccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCc
Confidence 32 67999988832 17899999999999999998 788999999999999999999665442 10
Q ss_pred --------CCC-------CeEEEeCCCcc-ccCCCCeeEEEEEc---ChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHc
Q 013210 234 --------RLG-------ADVVVHSISKF-ISGGADIIAGAVCG---PANLVNSMMDLHQGALMLLGPTMNPKVAFELSE 294 (447)
Q Consensus 234 --------~~g-------~di~~~S~sK~-~g~~g~~igG~l~~---~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~ 294 (447)
.+. ..+++.|+||. ++.+|+|+ ||++. ++++++.+...... ....+.+.+.++..++.
T Consensus 272 ~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRi-G~~~~~~~p~~li~~l~~~~~~--~~~~~~~~Q~a~~~~l~ 348 (481)
T PTZ00377 272 ISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRG-GYFELTNIPPEVREQIYKLASI--NLCSNVVGQLMTGLMCN 348 (481)
T ss_pred ccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCce-EEEEEeCCCHHHHHHHHHHhhe--ecCCChHHHHHHHHHhC
Confidence 111 35788999997 68899999 99875 88999888776541 12344455555555553
Q ss_pred cC----Cc---HH----HHHHHHHHHHHHHHHHHHhC-CCeeeCC
Q 013210 295 RI----PH---LG----LRMKEHCHRALIFARRMKKL-GLKVLYP 327 (447)
Q Consensus 295 ~~----~~---l~----~~~~~~~~~~~~l~~~L~~~-~~~v~~p 327 (447)
.. .. .. ...++++++++.+.+.|+++ +..+..|
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p 393 (481)
T PTZ00377 349 PPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPV 393 (481)
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecC
Confidence 21 11 11 12234678888999999887 3355433
No 146
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.95 E-value=4.2e-25 Score=221.63 Aligned_cols=242 Identities=12% Similarity=0.093 Sum_probs=173.3
Q ss_pred HHHHHHHHHHh----C----CC-eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 102 LNLSRQMAALE----G----TE-AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 102 ~~l~~~ia~l~----g----~~-~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
..+|+.+|+++ | .+ .+++|+|+++|+.+++++++.+||.|++++|+|+.+...+. ..|.++..++.
T Consensus 74 ~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~-----~~g~~~~~v~~ 148 (403)
T PRK08636 74 YKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFI-----LAGGNVHKMPL 148 (403)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-----hcCCEEEEEec
Confidence 46777777765 4 24 59999999999999999999999999999999999987763 25777766643
Q ss_pred C-------CHH----HHHHhhc--cCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc----
Q 013210 173 S-------DHE----MVNSAIV--QGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP---- 232 (447)
Q Consensus 173 ~-------d~~----~l~~~i~--~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~---- 232 (447)
+ |++ .++++++ .++++++++++||||||.+.+ +++|+++|++|++++|+||+|..+.++.
T Consensus 149 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~ 228 (403)
T PRK08636 149 EYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTP 228 (403)
T ss_pred cccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCC
Confidence 1 444 4566553 257899999999999999987 5688889999999999999996554321
Q ss_pred --cCC----CCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC-CcHHHHHHH
Q 013210 233 --ARL----GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKE 305 (447)
Q Consensus 233 --~~~----g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~ 305 (447)
..+ +..+++.|+||.+|.+|.|+ ||+++++++++.+....... ....+++.+.++..++... +++....+.
T Consensus 229 ~~~~~~~~~~~~i~~~S~SK~~~~~GlRi-G~iv~~~~li~~~~~~~~~~-~~~~~~~~q~~~~~~~~~~~~~~~~~~~~ 306 (403)
T PRK08636 229 SILEVEGAKDVAVESYTLSKSYNMAGWRV-GFVVGNKKLVGALKKIKSWL-DYGMFTPIQVAATIALDGDQSCVEEIRET 306 (403)
T ss_pred ChhcCCCccccEEEEEecccccCCcccee-eeeeCCHHHHHHHHHHHHHh-cccCChHHHHHHHHHHhCcHHHHHHHHHH
Confidence 111 34567899999999999999 99999999998887655411 1122333444444444322 334455566
Q ss_pred HHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH---HHHHHHHHHh
Q 013210 306 HCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE---EKANRLMNYL 369 (447)
Q Consensus 306 ~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~---~~~~~l~~~l 369 (447)
+.++++.+.+.|++.+..+..|. .|.++|+.++.. .....+...+
T Consensus 307 ~~~~~~~l~~~L~~~~~~~~~p~-------------------~g~~~~~~l~~~~~~~~~~~l~~~l 354 (403)
T PRK08636 307 YRKRRDVLIESFANAGWELQKPR-------------------ASMFVWAKIPEPARHLGSLEFSKQL 354 (403)
T ss_pred HHHHHHHHHHHHHHCCCcccCCC-------------------cceEEEEECCCccCCCCHHHHHHHH
Confidence 78888999999988755443332 567999998732 1134565543
No 147
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.95 E-value=7.6e-26 Score=223.50 Aligned_cols=293 Identities=15% Similarity=0.124 Sum_probs=203.5
Q ss_pred CchHHHHHHHHHHHhCCC---eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-
Q 013210 98 NPTVLNLSRQMAALEGTE---AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS- 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~---~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~- 173 (447)
....+++++.+++++|++ .+++|+||++|+..++.+++++||+|+++.+.|.+.. +...... .|.++.+++.+
T Consensus 31 ~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~--~~~~~~~-~g~~~~~v~~~~ 107 (356)
T cd06451 31 LALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDR--WADMAER-YGADVDVVEKPW 107 (356)
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHH--HHHHHHH-hCCCeEEeecCC
Confidence 344789999999999973 2789999999999999999999999999998877631 1111222 57788777643
Q ss_pred ----CHHHHHHhhccC-CceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCc
Q 013210 174 ----DHEMVNSAIVQG-RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISK 246 (447)
Q Consensus 174 ----d~~~l~~~i~~~-~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK 246 (447)
|++++++.+ ++ ++++|++++++||+|.+.|+++|.++|+++|+++++|++| +...++....++|+++.|+||
T Consensus 108 ~~~~~~~~l~~~i-~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K 186 (356)
T cd06451 108 GEAVSPEEIAEAL-EQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQK 186 (356)
T ss_pred CCCCCHHHHHHHH-hccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccccccCccEEEecCch
Confidence 789999999 55 8999999999999999999999999999999999999998 344455556689999999999
Q ss_pred cccCCCCeeEEEEEcChHHHHHHHH--Hhhhh-------------hhhcCCCccHH--HH-HHHHcc--CCcHHHHHHHH
Q 013210 247 FISGGADIIAGAVCGPANLVNSMMD--LHQGA-------------LMLLGPTMNPK--VA-FELSER--IPHLGLRMKEH 306 (447)
Q Consensus 247 ~~g~~g~~igG~l~~~~~~~~~l~~--~~~~~-------------~~~~g~~~~~~--~a-~~~~~~--~~~l~~~~~~~ 306 (447)
+++++.. + |+++.++++++.+.. ...+. ....+++++.. .+ ..++.. ...+....++.
T Consensus 187 ~l~~p~g-~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~ 264 (356)
T cd06451 187 ALGAPPG-L-GPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARH 264 (356)
T ss_pred hccCCCC-c-ceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 9997643 4 999999888777653 00000 00111222221 11 112211 12244556677
Q ss_pred HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCcc
Q 013210 307 CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYE 386 (447)
Q Consensus 307 ~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~ 386 (447)
.++++++.+.|++.+..+..+. .. ..+.++++.++.......+.+.|... +| +.++.|..
T Consensus 265 ~~~~~~l~~~L~~~g~~~~~~~--~~--------------~~~~~~~~~~~~~~~~~~~~~~L~~~--~g-I~~~~g~~- 324 (356)
T cd06451 265 RRLAKALREGLEALGLKLLAKP--EL--------------RSPTVTAVLVPEGVDGDEVVRRLMKR--YN-IEIAGGLG- 324 (356)
T ss_pred HHHHHHHHHHHHHcCCeeccCc--cc--------------CCCceEEEECCCCCCHHHHHHHHHHh--CC-EEEecccc-
Confidence 8889999999988876554321 10 12335566665333356677777652 23 34333311
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 387 TLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 387 s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+ ..++.||+|++ ..++++.++++.++|+++
T Consensus 325 -------~---------------~~~~~iRis~~-~~~~~e~v~~~~~~l~~~ 354 (356)
T cd06451 325 -------P---------------TAGKVFRIGHM-GEATREDVLGVLSALEEA 354 (356)
T ss_pred -------c---------------ccCCEEEEecC-CCCCHHHHHHHHHHHHHH
Confidence 0 01368999999 889999999999998764
No 148
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.95 E-value=2.8e-25 Score=223.52 Aligned_cols=290 Identities=15% Similarity=0.158 Sum_probs=202.7
Q ss_pred hHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC--CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHH
Q 013210 100 TVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCS--SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEM 177 (447)
Q Consensus 100 ~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 177 (447)
...+|+++||+++|.+..+++++|++|+..++..+.. +|+.|+++...|.++...+. ..|.++..++.+|.++
T Consensus 92 ~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~-----~~g~~~~~~~~~d~~~ 166 (410)
T PRK13392 92 PHVLLERELADLHGKESALLFTSGYVSNDAALSTLGKLLPGCVILSDALNHASMIEGIR-----RSGAEKQVFRHNDLAD 166 (410)
T ss_pred HHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHH-----HcCCeEEEEeCCCHHH
Confidence 4679999999999998889999999999999987753 78888887777877765542 2577777776677777
Q ss_pred HHHhhc---cCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCC-CCC-CCc--------cCCCCeEEEeCC
Q 013210 178 VNSAIV---QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PLV-LSP--------ARLGADVVVHSI 244 (447)
Q Consensus 178 l~~~i~---~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~~-~~~--------~~~g~di~~~S~ 244 (447)
+++.++ .+++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+ ++. ... .....|+++.|+
T Consensus 167 l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tl 246 (410)
T PRK13392 167 LEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTL 246 (410)
T ss_pred HHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEC
Confidence 776662 2578999999999999999999999999999999999999995 331 110 011468999999
Q ss_pred CccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCC-ccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCe
Q 013210 245 SKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPT-MNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLK 323 (447)
Q Consensus 245 sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~-~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~ 323 (447)
||++|++| ||+++++++++.++....+.....+.+ ..+.++..++..++......+++.++++++.+.|++.+.+
T Consensus 247 sK~~g~~G----G~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 322 (410)
T PRK13392 247 AKAFGCLG----GYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNANGIP 322 (410)
T ss_pred hHhhhccc----chhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999764 899889999988876654321111111 1222333344444444455577888899999999887654
Q ss_pred eeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHH
Q 013210 324 VLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAE 403 (447)
Q Consensus 324 v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~ 403 (447)
+. +. .++++.+.++.......+.+.|.. ..| +.++.+. +|...
T Consensus 323 ~~-~~-------------------~~~~~~i~~~~~~~~~~~~~~L~~--~~G-I~v~~~~------~p~~~-------- 365 (410)
T PRK13392 323 VM-PS-------------------PSHIVPVMVGDPTLCKAISDRLMS--EHG-IYIQPIN------YPTVP-------- 365 (410)
T ss_pred CC-CC-------------------CCCEEEEEeCCHHHHHHHHHHHHH--hCC-EEEeeeC------CCCCC--------
Confidence 43 11 244776777654446677777742 123 3433321 12111
Q ss_pred HHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhc
Q 013210 404 EKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDS 442 (447)
Q Consensus 404 ~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~ 442 (447)
.....||||+. ...+++.++.+.++|+++.+.
T Consensus 366 ------~~~~~lRis~~-~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 366 ------RGTERLRITPT-PLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred ------CCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHH
Confidence 12368999998 788888888888888876543
No 149
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=1.6e-25 Score=220.71 Aligned_cols=276 Identities=13% Similarity=0.189 Sum_probs=192.2
Q ss_pred CchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC--
Q 013210 98 NPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-- 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-- 173 (447)
.+...++|+.+|++++. +++++|+|+++++..+++++ .+ +.|+++.|.|+.+...+. ..|.++..++.+
T Consensus 53 ~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~~~~~~~~-----~~g~~~~~~~~~~~ 125 (354)
T PRK06358 53 DPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVT-KP-KKVLILAPTFAEYERALK-----AFDAEIEYAELTEE 125 (354)
T ss_pred CccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh-CC-CcEEEecCChHHHHHHHH-----HcCCeeEEEeCccc
Confidence 34457899999999876 55999999999999999876 43 689999999998877663 257777666542
Q ss_pred -----CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc---------cCCC
Q 013210 174 -----DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP---------ARLG 236 (447)
Q Consensus 174 -----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~---------~~~g 236 (447)
| +++.+.+ ..++++|++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++. ...+
T Consensus 126 ~~~~~d-~~~~~~~-~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 203 (354)
T PRK06358 126 TNFAAN-EIVLEEI-KEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFK 203 (354)
T ss_pred cCCCcc-HHHHHhh-ccCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCC
Confidence 4 4555556 557999999999999999997 7788888999999999999996665432 1124
Q ss_pred CeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHH
Q 013210 237 ADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFAR 315 (447)
Q Consensus 237 ~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~ 315 (447)
..+++.|+||.+|.+|.|+ ||++. ++.+++.+...+.. ...+.+.+.++..++...+++....+.+.++++.+.+
T Consensus 204 ~vi~~~S~SK~~gl~G~Ri-G~lv~~~~~~~~~~~~~~~~---~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 279 (354)
T PRK06358 204 NLIIIRAFTKFFAIPGLRL-GYGLTSNKNLAEKLLQMREP---WSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYN 279 (354)
T ss_pred CEEEEEechhhccCcchhh-eeeecCCHHHHHHHHHhCCC---CcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 6799999999999999999 99987 46777888766541 1223333444444443323345566777888999999
Q ss_pred HHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCcccccccccc
Q 013210 316 RMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGS 394 (447)
Q Consensus 316 ~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~ 394 (447)
.|++.+. .+..| .|+++++.++.. ..+.+.|... | +.+..|...
T Consensus 280 ~L~~~~~~~~~~~--------------------~g~f~~~~~~~~---~~~~~~l~~~---g-I~v~~~~~f-------- 324 (354)
T PRK06358 280 GLSEFKGIKVYKP--------------------SVNFIFFKLEKP---IDLRKELLKK---G-ILIRSCSNY-------- 324 (354)
T ss_pred HHhcCCCcEEcCC--------------------cceEEEEEcCch---HHHHHHHHHC---C-eEEEECCCC--------
Confidence 9987633 33322 245888988753 4566666642 3 444444211
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 013210 395 STSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEK 434 (447)
Q Consensus 395 ~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~ 434 (447)
.+..+++||||+|..++.+.+++.|.+
T Consensus 325 -------------~~~~~~~iRls~~~~~~~~~l~~~l~~ 351 (354)
T PRK06358 325 -------------RGLDENYYRVAVKSREDNKKLLKALEV 351 (354)
T ss_pred -------------CCCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 012357899999922444444444443
No 150
>PRK08363 alanine aminotransferase; Validated
Probab=99.95 E-value=2.7e-25 Score=222.74 Aligned_cols=215 Identities=16% Similarity=0.155 Sum_probs=161.4
Q ss_pred hHHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEe-
Q 013210 100 TVLNLSRQMAALEG--------TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV- 170 (447)
Q Consensus 100 ~~~~l~~~ia~l~g--------~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v- 170 (447)
...++|+.+|++++ .+++++|+|+++|+.+++.+++++||+|+++.|+|+.+...+. ..|..+..+
T Consensus 71 g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-----~~g~~~v~~~ 145 (398)
T PRK08363 71 GLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVK-----FYGGVPVEYR 145 (398)
T ss_pred CcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-----HcCCEEEEec
Confidence 34678899998862 2469999999999999999999999999999999999887663 245555544
Q ss_pred CC------CCHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----cC--
Q 013210 171 DI------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-----AR-- 234 (447)
Q Consensus 171 ~~------~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-----~~-- 234 (447)
+. .|++++++++ ++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..+.++. ..
T Consensus 146 ~~~~~~~~~d~~~l~~~~-~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~ 224 (398)
T PRK08363 146 TIEEEGWQPDIDDIRKKI-TEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLT 224 (398)
T ss_pred cccccCCcCCHHHHHhhC-CcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcC
Confidence 22 2688899888 778999999999999999987 8899999999999999999996554321 11
Q ss_pred -CCCeEEEeCCCccccCCCCeeEEEEEc--ChHHHHHHHHHhhhh--hhhcCCCccHHHHHHHHcc-CCcHHHHHHHHHH
Q 013210 235 -LGADVVVHSISKFISGGADIIAGAVCG--PANLVNSMMDLHQGA--LMLLGPTMNPKVAFELSER-IPHLGLRMKEHCH 308 (447)
Q Consensus 235 -~g~di~~~S~sK~~g~~g~~igG~l~~--~~~~~~~l~~~~~~~--~~~~g~~~~~~~a~~~~~~-~~~l~~~~~~~~~ 308 (447)
....+++.||||.++.+|.|+ ||++. ++++++.+....... .....+.+.+.++..++.. .+++.+..+++.+
T Consensus 225 ~~~~vi~~~SfSK~~~~~GlRi-G~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~ 303 (398)
T PRK08363 225 KDVPVIVMNGLSKVYFATGWRL-GYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKE 303 (398)
T ss_pred cCCcEEEEecchhccCCccceE-EEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 135688999999999999999 99886 677766665432211 0122344444444444443 3445666677889
Q ss_pred HHHHHHHHHHhCC
Q 013210 309 RALIFARRMKKLG 321 (447)
Q Consensus 309 ~~~~l~~~L~~~~ 321 (447)
+++.+.+.|++++
T Consensus 304 ~~~~l~~~L~~~~ 316 (398)
T PRK08363 304 RRDYIYKRLNEIP 316 (398)
T ss_pred HHHHHHHHHhcCC
Confidence 9999999998763
No 151
>PRK08175 aminotransferase; Validated
Probab=99.95 E-value=3.5e-25 Score=221.69 Aligned_cols=244 Identities=16% Similarity=0.124 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHh----C----CC-eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 101 VLNLSRQMAALE----G----TE-AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 101 ~~~l~~~ia~l~----g----~~-~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
..++++.+++++ | .+ .+++|+|++++++.++..++++||+|++++|+|+.+...+. ..|.++..++
T Consensus 69 ~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~-----~~g~~~~~v~ 143 (395)
T PRK08175 69 IPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAV-----IAGAQVRSVP 143 (395)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-----HcCCeEEEEe
Confidence 356788888765 2 24 59999999999999999999999999999999998776652 2577777776
Q ss_pred CC----CHHHHHHhhcc--CCceEEEEEcCCCCCccccCH---HHHHHHHHhcCCEEEEeCCCCCCCCCc------cC--
Q 013210 172 IS----DHEMVNSAIVQ--GRTKVLYFESISNPTLAVANI---PELSRLAHDKGVTVVVDNTFSPLVLSP------AR-- 234 (447)
Q Consensus 172 ~~----d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~l---~~I~~la~~~gi~livD~~~~~~~~~~------~~-- 234 (447)
.+ +.++++++++. +++++|++++|+||||.+.+. ++|+++|++||+++|+|++|..+.++. ..
T Consensus 144 ~~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~ 223 (395)
T PRK08175 144 LVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVP 223 (395)
T ss_pred cccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCC
Confidence 54 47888887732 478999999999999999986 688999999999999999995544321 11
Q ss_pred --CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC-CcHHHHHHHHHHHHH
Q 013210 235 --LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKEHCHRAL 311 (447)
Q Consensus 235 --~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~~~~~~~ 311 (447)
.+..+++.|+||.+|.+|.|+ ||+++++++++.+.+.+... ....+++.+.++...+... .++....+.++++++
T Consensus 224 ~~~~~~i~~~S~SK~~g~pGlRi-G~~~~~~~l~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 301 (395)
T PRK08175 224 GAKDVAVEFFTLSKSYNMAGWRI-GFMVGNPELVSALARIKSYH-DYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRD 301 (395)
T ss_pred CcccCEEEEeeccccccCcchhh-eeeeCCHHHHHHHHHHHhhc-ccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 135678999999999999999 99999999999887765411 1222333444444444332 234455667788899
Q ss_pred HHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHH---HHHHHHHHhh
Q 013210 312 IFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEE---KANRLMNYLQ 370 (447)
Q Consensus 312 ~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~---~~~~l~~~l~ 370 (447)
.+.+.|++.+..+..|. .|.++|+.++... ....+..++.
T Consensus 302 ~~~~~L~~~~~~~~~p~-------------------~g~~i~i~l~~~~~~~~~~~~~~~l~ 344 (395)
T PRK08175 302 VLVKGLHEAGWMVEMPK-------------------ASMYVWAKIPEPYAAMGSLEFAKKLL 344 (395)
T ss_pred HHHHHHHHcCCcccCCC-------------------EEEEEEEECCcccCCCCHHHHHHHHH
Confidence 99999988765443332 4679999997431 2456665543
No 152
>PRK09265 aminotransferase AlaT; Validated
Probab=99.95 E-value=4.1e-25 Score=221.84 Aligned_cols=229 Identities=14% Similarity=0.102 Sum_probs=162.9
Q ss_pred HHHHHHHHHHh------CC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC-
Q 013210 102 LNLSRQMAALE------GT--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI- 172 (447)
Q Consensus 102 ~~l~~~ia~l~------g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~- 172 (447)
..+++.+|+++ +. +.+++|+|+++++..++++++++||+|+++.|+|+.+...+. ..|..+..++.
T Consensus 75 ~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~~v~~~~~ 149 (404)
T PRK09265 75 FSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVS-----LSGGKPVHYLCD 149 (404)
T ss_pred HHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHH-----HcCCEEEEEecc
Confidence 57889999887 33 459999999999999999999999999999999998877763 14555544432
Q ss_pred ------CCHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------cCC--
Q 013210 173 ------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------ARL-- 235 (447)
Q Consensus 173 ------~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~~~-- 235 (447)
.|++++++++ ++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+.++. ..+
T Consensus 150 ~~~~~~~d~~~l~~~~-~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 228 (404)
T PRK09265 150 EEAGWFPDLDDIRSKI-TPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAP 228 (404)
T ss_pred cccCCCCCHHHHHHhc-cccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCC
Confidence 2688999988 778999999999999999998 8889999999999999999996554321 111
Q ss_pred -CCeEEEeCCCccccCCCCeeEEEEEc--ChHH----HHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHH---HHHH
Q 013210 236 -GADVVVHSISKFISGGADIIAGAVCG--PANL----VNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGL---RMKE 305 (447)
Q Consensus 236 -g~di~~~S~sK~~g~~g~~igG~l~~--~~~~----~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~---~~~~ 305 (447)
...+++.|+||.+|.+|.|+ ||++. ++++ ++.+..... .....+.+.+.++..++...+.... ..++
T Consensus 229 ~~~vi~~~S~SK~~~~pGlRi-G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 305 (404)
T PRK09265 229 DLLCVTFNGLSKAYRVAGFRV-GWMVLSGPKKHAKGYIEGLDMLAS--MRLCANVPAQHAIQTALGGYQSINELILPGGR 305 (404)
T ss_pred CceEEEEecchhhccCcccce-EEEEEeCchHHHHHHHHHHHHHhc--cccCCCcHHHHHHHHHhcCchhHHHHHHHHHH
Confidence 24578899999999999999 88874 4443 333322211 1123344455555555543333222 2245
Q ss_pred HHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013210 306 HCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 358 (447)
Q Consensus 306 ~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 358 (447)
+.++++.+.+.|++++ ..+..|. .|.++|+.++.
T Consensus 306 ~~~~r~~~~~~L~~~~~~~~~~p~-------------------~g~~l~~~~~~ 340 (404)
T PRK09265 306 LYEQRDRAWELLNAIPGVSCVKPK-------------------GALYAFPKLDP 340 (404)
T ss_pred HHHHHHHHHHHHhcCCCCcccCCC-------------------cceEEEEEecc
Confidence 6777888888888763 2333332 46688888863
No 153
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.95 E-value=5.3e-25 Score=222.30 Aligned_cols=288 Identities=15% Similarity=0.179 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHhC--------C--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEe
Q 013210 101 VLNLSRQMAALEG--------T--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 170 (447)
Q Consensus 101 ~~~l~~~ia~l~g--------~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v 170 (447)
...|++.+|++++ . +.+++|+|+++|+.+++..++.+||.|+++.|.|+++...+.. + .|+++..+
T Consensus 97 ~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~---~-~g~~vv~v 172 (447)
T PLN02607 97 LKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---R-TGVKIVPI 172 (447)
T ss_pred hHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHh---c-CCcEEEEE
Confidence 3578888888763 1 3499999999999999999999999999999999998765521 2 46777666
Q ss_pred CCC-------CHHHHHHhhcc-----CCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc---
Q 013210 171 DIS-------DHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP--- 232 (447)
Q Consensus 171 ~~~-------d~~~l~~~i~~-----~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~--- 232 (447)
+.+ |+++++++++. .++++|++++|+||||.+.+ +++|.++|++||+++|+||+|....++.
T Consensus 173 ~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f 252 (447)
T PLN02607 173 HCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEF 252 (447)
T ss_pred eCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCc
Confidence 542 67888888732 47899999999999999997 6788899999999999999996543321
Q ss_pred ---c---------C-CCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCc
Q 013210 233 ---A---------R-LGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPH 298 (447)
Q Consensus 233 ---~---------~-~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~ 298 (447)
. + .+..+++.|+||.||.+|.|+ ||++. ++++...++..... ...+...+..+...+...+.
T Consensus 253 ~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRv-G~ivs~n~~l~~~~~~~~~~---~~~s~~~q~~~~~~L~d~~~ 328 (447)
T PLN02607 253 VSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRV-GTIYSYNDKVVTTARRMSSF---TLVSSQTQHLLASMLSDEEF 328 (447)
T ss_pred ccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceE-EEEEEcCHHHHHHHHHHhhc---CCCCHHHHHHHHHHhCCchh
Confidence 1 1 134688999999999999999 99987 66676666544321 12233344444444443222
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH------HHHHHHHHH
Q 013210 299 ----LGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE------EKANRLMNY 368 (447)
Q Consensus 299 ----l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~------~~~~~l~~~ 368 (447)
+....+++.++++.+.+.|++.+..+..| ..|.++|+.++.. +...++.+.
T Consensus 329 ~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~-------------------~ag~fvw~~L~~~~~~~~~~~e~~l~~~ 389 (447)
T PLN02607 329 TENYIRTNRERLRKRYEMIVQGLRRAGIECLKG-------------------NAGLFCWMNLSPLLETPTREGELALWDS 389 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccC-------------------CeeEEEEEEchHhhcCCCchhHHHHHHH
Confidence 33455667888899999999876543322 2577999998621 222355544
Q ss_pred hhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCC---CHHHHHHHHHHHHHHhh
Q 013210 369 LQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLG---TLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 369 l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~---~~~~~i~~l~~al~~~~ 440 (447)
+.. +.| +.++.|..+ + ...++++||+++ .. +.++.+++|.+++++-+
T Consensus 390 ll~--~~g-V~v~pG~~f----------~-----------~~~~g~fRi~fa-~~~~~~l~~gl~Ri~~~l~~~~ 439 (447)
T PLN02607 390 ILR--EVK-LNISPGSSC----------H-----------CSEPGWFRVCFA-NMSEDTLEVALKRIHRFMDRRK 439 (447)
T ss_pred HHH--hCC-EEEcCcccc----------C-----------CCCCCEEEEEec-cCCHHHHHHHHHHHHHHHHHHH
Confidence 432 123 345555221 0 112589999999 63 34445555666665443
No 154
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=2.3e-25 Score=217.97 Aligned_cols=235 Identities=17% Similarity=0.110 Sum_probs=171.7
Q ss_pred CCCCchHHHHHHHHHHHhCC---CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 95 RHFNPTVLNLSRQMAALEGT---EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 95 r~~~~~~~~l~~~ia~l~g~---~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
++..+. ..|++.+|+.+|. +.+++|+|+++++.++. .++++|+ |++..|+|+.+...+. ..|.++..++
T Consensus 50 ~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~-~~~~~g~-v~v~~P~y~~y~~~~~-----~~g~~~~~v~ 121 (339)
T PRK06959 50 RLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALP-ALLPRGR-VGIAPLAYSEYAPAFA-----RHGHRVVPLD 121 (339)
T ss_pred hCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHH-HhcCCCe-EEEcCCCcHHHHHHHH-----HCCCEEEeec
Confidence 345555 7899999999986 45999999999998665 4567776 8899999999987773 3688888877
Q ss_pred CCCHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHH---HHhcCCEEEEeCCCCCCCCCc--c---CCCCeEEEeC
Q 013210 172 ISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRL---AHDKGVTVVVDNTFSPLVLSP--A---RLGADVVVHS 243 (447)
Q Consensus 172 ~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~l---a~~~gi~livD~~~~~~~~~~--~---~~g~di~~~S 243 (447)
.++ + .+ ...++++++++||||||.+.+.+++.++ |+++++++|+||+|..+...+ . +....+++.|
T Consensus 122 ~~~-~----~~-~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~S 195 (339)
T PRK06959 122 EAA-D----TL-PAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRS 195 (339)
T ss_pred ccc-h----hc-cccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEec
Confidence 654 2 23 3356799999999999999987666555 567899999999996654211 1 2245689999
Q ss_pred CCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCe
Q 013210 244 ISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLK 323 (447)
Q Consensus 244 ~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~ 323 (447)
|||.||.+|.|+ ||+++++++++.+...+.. ...+.+.+.++..++..........+++.++++++.+.|+++++.
T Consensus 196 fSK~~gl~GlRi-Gy~v~~~~li~~l~~~~~~---~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~ 271 (339)
T PRK06959 196 VGKFFGLAGVRA-GFVLAAPALLAALRDALGA---WTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAHGFA 271 (339)
T ss_pred ChhhcCCcchhe-EEEecCHHHHHHHHHhcCC---CCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 999999999999 9999999999999877552 223344444555555443344555677888999999999987654
Q ss_pred eeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 324 VLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 324 v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
+. + .+.++++.+++ ...+.+.|..
T Consensus 272 ~~-~--------------------~~~f~~~~~~~---~~~l~~~l~~ 295 (339)
T PRK06959 272 VH-A--------------------TPLFSWTDDPR---AAALHAALAR 295 (339)
T ss_pred cc-C--------------------cceEEEEeCCC---HHHHHHHHHh
Confidence 32 1 12377787753 3566777765
No 155
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.95 E-value=7.1e-25 Score=219.31 Aligned_cols=241 Identities=15% Similarity=0.178 Sum_probs=172.2
Q ss_pred hHHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 100 TVLNLSRQMAALEG--------TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 100 ~~~~l~~~ia~l~g--------~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
....+++.+|++++ .+++++|+|++++++.++.+++.+||.|+++.|.|..+...+. . .|+++.+++
T Consensus 74 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~----~-~g~~v~~v~ 148 (394)
T PRK06836 74 GYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVD----N-HGGKLVVVP 148 (394)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHH----H-cCCEEEEEe
Confidence 34678888888863 3569999999999999999999999999999999999876653 2 688888876
Q ss_pred CC------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHh------cCCEEEEeCCCCCCCCCc----
Q 013210 172 IS------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHD------KGVTVVVDNTFSPLVLSP---- 232 (447)
Q Consensus 172 ~~------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~------~gi~livD~~~~~~~~~~---- 232 (447)
.+ |++++++++ ++++++|++++|+||||.+.| +++|+++|++ ||+++|+|++|..+.++.
T Consensus 149 ~~~~~~~~d~~~l~~~~-~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~ 227 (394)
T PRK06836 149 TDTDTFQPDLDALEAAI-TPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVP 227 (394)
T ss_pred cCCccCcCCHHHHHhhc-CcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCC
Confidence 53 689999999 778999999999999999987 5677788888 899999999996654431
Q ss_pred ---cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHH---HHH---HhhhhhhhcCCCccHHHHHHHHccCCcHHHHH
Q 013210 233 ---ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNS---MMD---LHQGALMLLGPTMNPKVAFELSERIPHLGLRM 303 (447)
Q Consensus 233 ---~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~---l~~---~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~ 303 (447)
...+.++++.|+||.+|.+|.|+ ||+++++++.+. +.. ..........+...+.++...+.. ....
T Consensus 228 ~~~~~~~~~i~~~S~SK~~~~pGlRi-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~ 302 (394)
T PRK06836 228 YIFKYYDNSIVVYSFSKSLSLPGERI-GYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDA----TVDV 302 (394)
T ss_pred ChHHccCcEEEEecchhhccCcceee-EEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCC----hHHH
Confidence 12256899999999999999999 999988765432 111 111000011112222232222222 1234
Q ss_pred HHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 304 KEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 304 ~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
+++.++++.+.+.|++++..+..|. .|.++|+.++.. ....+.+.|..
T Consensus 303 ~~~~~~r~~l~~~L~~~g~~~~~~~-------------------gg~~~~~~~~~~-~~~~~~~~l~~ 350 (394)
T PRK06836 303 SIYKRNRDLLYDGLTELGFECVKPQ-------------------GAFYLFPKSPEE-DDVAFCEKAKK 350 (394)
T ss_pred HHHHHHHHHHHHHHHhCCCEeecCC-------------------ceEEEEEeCCCC-CHHHHHHHHHh
Confidence 5677888899999988766554332 356788877642 24556666654
No 156
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.95 E-value=8e-25 Score=219.80 Aligned_cols=288 Identities=17% Similarity=0.197 Sum_probs=202.4
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC--CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCH
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCS--SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDH 175 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~ 175 (447)
.+...++++++|+++|.+.+++++||++|+..++..+.. +|+.|++....|+++...+. ..|.++..++..|+
T Consensus 89 ~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~-----~~g~~~~~~~~~d~ 163 (406)
T PRK13393 89 NHYHVLLEAELADLHGKEAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIR-----HSRAEKRIFRHNDP 163 (406)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHH-----HcCCeEEEeCCCCH
Confidence 346789999999999999999999999999999987755 67777777788877776652 24667777777788
Q ss_pred HHHHHhhcc---CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCC-CCCCC----c-----cCCCCeEEEe
Q 013210 176 EMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PLVLS----P-----ARLGADVVVH 242 (447)
Q Consensus 176 ~~l~~~i~~---~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~~~~----~-----~~~g~di~~~ 242 (447)
+++++.++. +++++|++++++|++|.+.|+++|.++|+++|+++|+|++|+ ++... . .....|+++.
T Consensus 164 ~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~ 243 (406)
T PRK13393 164 ADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEG 243 (406)
T ss_pred HHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEE
Confidence 888877732 367899999999999999999999999999999999999984 33111 0 1113588899
Q ss_pred CCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccH---HHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHh
Q 013210 243 SISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNP---KVAFELSERIPHLGLRMKEHCHRALIFARRMKK 319 (447)
Q Consensus 243 S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~---~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 319 (447)
|++|.+|+.| ||+++++++++.+......+. .+...++ .++..++..++......+++.++++++.+.|++
T Consensus 244 tlsKa~g~~G----G~~~~~~~~~~~l~~~~~~~~--~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~ 317 (406)
T PRK13393 244 TLAKAFGVMG----GYITGSAALCDFIRSFASGFI--FTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDK 317 (406)
T ss_pred eCchhhcccC----ceeeCCHHHHHHHHHhCcCce--ecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999754 899999998888876544221 2222222 223333333322223345667888999999987
Q ss_pred CCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCC
Q 013210 320 LGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSE 399 (447)
Q Consensus 320 ~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~ 399 (447)
.+..+. + +.|.++.+.+.+...+..+.+.|... .| +.++.+ .+|...
T Consensus 318 ~g~~~~-~-------------------~~~~i~~v~~~~~~~~~~l~~~L~~~--~G-i~v~~~------~~p~~p---- 364 (406)
T PRK13393 318 AGIPHL-P-------------------NPSHIVPVMVGDPVLCKQISDELLDR--YG-IYVQPI------NYPTVP---- 364 (406)
T ss_pred cCCCcC-C-------------------CCCCeEEEEeCCHHHHHHHHHHHHHh--CC-EEEEeE------CCCCCC----
Confidence 654322 1 23558888776544466777777541 23 333332 112111
Q ss_pred CCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 400 LNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 400 ~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
...+.||||++ ..+++++++.+.++|+++.
T Consensus 365 ----------~g~~~iRis~~-~~~t~edid~l~~~l~~~~ 394 (406)
T PRK13393 365 ----------RGTERLRITPS-PLHTDADIEHLVQALSEIW 394 (406)
T ss_pred ----------CCCceEEEEEC-CCCCHHHHHHHHHHHHHHH
Confidence 11367999999 8888888998888888764
No 157
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.95 E-value=8.6e-25 Score=219.41 Aligned_cols=291 Identities=16% Similarity=0.164 Sum_probs=200.3
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC--CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCH
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCS--SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDH 175 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~ 175 (447)
.+...+|++++|+++|.+..+++++|++|+..++..+.. +++.|+.....|.+....+. ..|.++..++..|+
T Consensus 89 ~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~-----~~g~~~~~~~~~d~ 163 (402)
T TIGR01821 89 NIPHVELEAELADLHGKESALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIR-----HSGAEKFIFRHNDV 163 (402)
T ss_pred cHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHH-----HcCCeEEEECCCCH
Confidence 566789999999999998899999999999999988764 56666666666666555542 25667666777788
Q ss_pred HHHHHhhcc---CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCC-CCCCC-----cc--C--CCCeEEEe
Q 013210 176 EMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PLVLS-----PA--R--LGADVVVH 242 (447)
Q Consensus 176 ~~l~~~i~~---~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~~~~-----~~--~--~g~di~~~ 242 (447)
+++++.++. +++++|++++|+||+|.+.|+++|.++|++||+++|+|++|+ ++... .. . ..+|+++.
T Consensus 164 ~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~ 243 (402)
T TIGR01821 164 AHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEG 243 (402)
T ss_pred HHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEE
Confidence 888887731 368999999999999999999999999999999999999984 32111 00 1 13689999
Q ss_pred CCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCc-cHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCC
Q 013210 243 SISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTM-NPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLG 321 (447)
Q Consensus 243 S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~ 321 (447)
|++|.+|+.| ||+++++++++.+...........+.++ ...++..++..++......+++.++++++.+.|++.+
T Consensus 244 t~sKa~g~~G----G~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g 319 (402)
T TIGR01821 244 TLAKAFGVVG----GYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALG 319 (402)
T ss_pred echhhhccCC----ceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999764 8999999998888765442211112222 2222323333333334445566788899999998876
Q ss_pred CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCC
Q 013210 322 LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELN 401 (447)
Q Consensus 322 ~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~ 401 (447)
.++..+ .|+++.+.++....+..+.+.|... .| +.++.. .+|...
T Consensus 320 ~~~~~~--------------------~~~i~~i~~~~~~~a~~~~~~L~~~--~G-i~v~~~------~~p~~~------ 364 (402)
T TIGR01821 320 IPVIPN--------------------PSHIVPVIIGDAALCKKVSDLLLNK--HG-IYVQPI------NYPTVP------ 364 (402)
T ss_pred CCcCCC--------------------CCCEEEEEeCCHHHHHHHHHHHHhc--CC-EEEEeE------CCCCCC------
Confidence 543211 2447888776554566777776531 23 233221 112111
Q ss_pred HHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013210 402 AEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 402 ~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 441 (447)
...+.||||+. ...++++++.+.++|+++.+
T Consensus 365 --------~g~~~lRis~~-~~~t~edi~~~~~~l~~~~~ 395 (402)
T TIGR01821 365 --------RGTERLRITPT-PAHTDKMIDDLVEALLLVWD 395 (402)
T ss_pred --------CCCceEEEEeC-CCCCHHHHHHHHHHHHHHHH
Confidence 12357999998 77888888888888877654
No 158
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.95 E-value=1e-24 Score=221.78 Aligned_cols=286 Identities=17% Similarity=0.156 Sum_probs=196.0
Q ss_pred HHHHHHHHHHhC----------CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 102 LNLSRQMAALEG----------TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 102 ~~l~~~ia~l~g----------~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
..|++.||++++ .+.+++|+|+++++..++.+++.+||.|+++.|.|+.+...+.. ..|.++..++
T Consensus 89 ~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~----~~g~~~v~v~ 164 (468)
T PLN02450 89 PAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKW----RTGVEIVPIH 164 (468)
T ss_pred HHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhh----cCCcEEEEEe
Confidence 468888888863 24599999999999999999999999999999999998766521 1577777776
Q ss_pred CC-------CHHHHHHhhcc-----CCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc----
Q 013210 172 IS-------DHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP---- 232 (447)
Q Consensus 172 ~~-------d~~~l~~~i~~-----~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~---- 232 (447)
.+ |++++++++++ .++++|++++||||||.+.+ +++|+++|++||+++|+||+|..+.++.
T Consensus 165 ~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~ 244 (468)
T PLN02450 165 CSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFV 244 (468)
T ss_pred cCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcc
Confidence 42 66888887732 37899999999999999987 5678888999999999999996543321
Q ss_pred --c------------CCCCeEEEeCCCccccCCCCeeEEEEEcChH-HHHHHHHHhhhhhhhcCCCccHHHHHHHHccCC
Q 013210 233 --A------------RLGADVVVHSISKFISGGADIIAGAVCGPAN-LVNSMMDLHQGALMLLGPTMNPKVAFELSERIP 297 (447)
Q Consensus 233 --~------------~~g~di~~~S~sK~~g~~g~~igG~l~~~~~-~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~ 297 (447)
. ..+..+++.|+||.++.+|.|+ ||++++++ +++.+..... . ...+.+.+.++..++....
T Consensus 245 s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRi-G~li~~~~~l~~~~~~~~~-~--~~~s~~~Q~a~~~~L~~~~ 320 (468)
T PLN02450 245 SVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRV-GAIYSNDEMVVSAATKMSS-F--GLVSSQTQYLLSALLSDKK 320 (468)
T ss_pred cHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccE-EEEEECCHHHHHHHHHHhh-c--CCCCHHHHHHHHHHhCCch
Confidence 1 1245789999999999999999 99998754 4555554432 1 1223444545444554432
Q ss_pred ----cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH------HHHHHHHH
Q 013210 298 ----HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE------EKANRLMN 367 (447)
Q Consensus 298 ----~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~------~~~~~l~~ 367 (447)
.+....+++.++++.+.+.|++++..+..| ..|.++|+.++.. .....+..
T Consensus 321 ~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~-------------------~~g~flwi~l~~~~~~~~~~~~~~l~~ 381 (468)
T PLN02450 321 FTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKS-------------------NAGLFCWVDMRHLLKSNTFEAEMELWK 381 (468)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC-------------------CceEEEEEEchHhcCcCCchHHHHHHH
Confidence 245566778999999999999886544322 2455889988621 11233444
Q ss_pred HhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCC---HHHHHHHHHHHHHHh
Q 013210 368 YLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGT---LDQRWSQFEKALSRM 439 (447)
Q Consensus 368 ~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~---~~~~i~~l~~al~~~ 439 (447)
.|.. +.| +.+.-|..+ . ...++++||+++ ..+ .++.++.|.+++.+.
T Consensus 382 ~ll~--~~g-V~v~PG~~f--------~-------------~~~~g~~Rl~f~-~~~~~~l~~~l~ri~~~l~~~ 431 (468)
T PLN02450 382 KIVY--EVK-LNISPGSSC--------H-------------CTEPGWFRVCFA-NMSEETLDLAMKRLKSFVESD 431 (468)
T ss_pred HHHH--hCC-EEEeCcccc--------C-------------CCCCCEEEEEec-CCCHHHHHHHHHHHHHHHHhc
Confidence 4432 123 455555221 0 012579999999 533 333445555555443
No 159
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.95 E-value=5.6e-25 Score=224.55 Aligned_cols=284 Identities=18% Similarity=0.186 Sum_probs=190.0
Q ss_pred HHHHHHHHHHhC----------CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 102 LNLSRQMAALEG----------TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 102 ~~l~~~ia~l~g----------~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
.++++.||++++ .+.+++|+|+++|+.+++.+++.+||.|+++.|.|+++...+.. + .|+++..++
T Consensus 97 ~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~---~-~G~~vv~v~ 172 (496)
T PLN02376 97 KKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRW---R-TGVEIIPVP 172 (496)
T ss_pred HHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHh---h-CCCEEEEEe
Confidence 468888887764 24599999999999999999999999999999999998765521 2 577887776
Q ss_pred CC-------CHHHHHHhhc-----cCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc----
Q 013210 172 IS-------DHEMVNSAIV-----QGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP---- 232 (447)
Q Consensus 172 ~~-------d~~~l~~~i~-----~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~---- 232 (447)
.+ |+++++++++ ..++++|++++|+||||.+.+ +++|+++|++||+++|+||+|..+.++.
T Consensus 173 ~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~ 252 (496)
T PLN02376 173 CSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFV 252 (496)
T ss_pred CCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcc
Confidence 52 6778776531 247899999999999999997 5678889999999999999996654321
Q ss_pred --cCC-----------CCeEEEeCCCccccCCCCeeEEEEEcC-hHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCc
Q 013210 233 --ARL-----------GADVVVHSISKFISGGADIIAGAVCGP-ANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPH 298 (447)
Q Consensus 233 --~~~-----------g~di~~~S~sK~~g~~g~~igG~l~~~-~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~ 298 (447)
..+ +..+++.|+||.+|.+|.|+ ||++.+ +.+.+.++.... . ...+...+.++...+.....
T Consensus 253 si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRv-G~li~~~~~l~~~~~~~~~-~--~~vs~~~Q~a~~~~L~d~~~ 328 (496)
T PLN02376 253 SVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRV-GIVYSFNDSVVSCARKMSS-F--GLVSSQTQLMLASMLSDDQF 328 (496)
T ss_pred cHHHhhccccccccCCCeEEEEEeccccCCCCcceE-EEEEECCHHHHHHHHHHhh-c--CCCCHHHHHHHHHHhCChhH
Confidence 001 12356899999999999999 999885 555555444332 1 12233344444444443222
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-------HHHHHHHH
Q 013210 299 ----LGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-------EKANRLMN 367 (447)
Q Consensus 299 ----l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-------~~~~~l~~ 367 (447)
+.+..+++.++++.+.+.|++.++.+..| ..|.++|+.++.. +....+.+
T Consensus 329 ~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~-------------------~aG~flwi~l~~~~~~~~~~~~e~~l~~ 389 (496)
T PLN02376 329 VDNFLMESSRRLGIRHKVFTTGIKKADIACLTS-------------------NAGLFAWMDLRHLLRDRNSFESEIELWH 389 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-------------------CceEEEEEEchhhhccCCchhHHHHHHH
Confidence 22334567888888999998876544322 2567999998631 11244555
Q ss_pred HhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCC---HHHHHHHHHHHHH
Q 013210 368 YLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGT---LDQRWSQFEKALS 437 (447)
Q Consensus 368 ~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~---~~~~i~~l~~al~ 437 (447)
.+... .| +.++-|..+ +. -.++++||+++ ..+ .++.++.|.+++.
T Consensus 390 ~ll~~--~g-V~v~pGs~F----------~~-----------~~~g~~Ri~fa-~~~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 390 IIIDK--VK-LNVSPGSSF----------RC-----------TEPGWFRICFA-NMDDDTLHVALGRIQDFVS 437 (496)
T ss_pred HHHHc--CC-EEEeCcccc----------CC-----------CCCCEEEEEee-CCCHHHHHHHHHHHHHHHH
Confidence 55431 23 455555221 00 12479999999 633 3333444555554
No 160
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.94 E-value=2.2e-25 Score=240.03 Aligned_cols=348 Identities=14% Similarity=0.077 Sum_probs=228.0
Q ss_pred cccccccCC-HHHH-HHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC----eEEEeCChHHHHHHHHHHh-cC
Q 013210 64 ASATFTVME-PETM-RRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE----AAYCTASGMSAISSVLMQL-CS 136 (447)
Q Consensus 64 ~att~~~~~-~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~----~~~~tsggt~A~~~al~~l-~~ 136 (447)
+++|+..+. ++++ ..++...++||.+.|..++.....++++|+.+|+++|++ .++||+|+|+|+++++.++ ++
T Consensus 41 Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~ 120 (805)
T PLN02724 41 AGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWS 120 (805)
T ss_pred CCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCC
Confidence 345554433 4444 445566778998878788888888999999999999973 3799999999999999887 67
Q ss_pred CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-------------C--HHHHHHhhc---------cCCceEEEE
Q 013210 137 SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-------------D--HEMVNSAIV---------QGRTKVLYF 192 (447)
Q Consensus 137 ~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-------------d--~~~l~~~i~---------~~~t~lV~i 192 (447)
+||+|+++..+|++....+ ....+ .|+++.+++.+ + .++|++.+. .++|++|.+
T Consensus 121 ~gd~Iv~t~~eH~svl~~~-~~a~~-~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~ 198 (805)
T PLN02724 121 SESHFCYTLENHNSVLGIR-EYALE-KGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAF 198 (805)
T ss_pred CCCeEEEeeccccchHHHH-HHHHH-cCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEE
Confidence 8999999999998887554 44344 68888888754 1 144555421 246789999
Q ss_pred EcCCCCCccccCHHHHHHHHHhc--------CCEEEEeCCC--CCCCCCccCCCCeEEEeCCCcccc-CCCCeeEEEEEc
Q 013210 193 ESISNPTLAVANIPELSRLAHDK--------GVTVVVDNTF--SPLVLSPARLGADVVVHSISKFIS-GGADIIAGAVCG 261 (447)
Q Consensus 193 ~~~~NptG~v~~l~~I~~la~~~--------gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g-~~g~~igG~l~~ 261 (447)
.+.+|.+|.++|++.|..+++.. ++++++|.+| +..+++..++++|++++|+||++| +.| + |+++.
T Consensus 199 ~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G--~-G~L~v 275 (805)
T PLN02724 199 PSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTG--L-GALLV 275 (805)
T ss_pred EccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCCC--c-eEEEE
Confidence 99999999999999775555532 3689999998 667778888899999999999999 445 4 88888
Q ss_pred ChHHHHHHHHHhhhhh--------------------hhcCCCccHHHHHHHHccCCc-----HHHHHHHHHHHHHHHHHH
Q 013210 262 PANLVNSMMDLHQGAL--------------------MLLGPTMNPKVAFELSERIPH-----LGLRMKEHCHRALIFARR 316 (447)
Q Consensus 262 ~~~~~~~l~~~~~~~~--------------------~~~g~~~~~~~a~~~~~~~~~-----l~~~~~~~~~~~~~l~~~ 316 (447)
++++.+.+.....++. ..-.+++.......+..+++. +....++..++.+++.+.
T Consensus 276 r~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~ 355 (805)
T PLN02724 276 RRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANS 355 (805)
T ss_pred ehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 8877766543211110 011112221111111112211 233445567888899999
Q ss_pred HHhCC-------CeeeCCCCCC-CchhHHHHHHhccCCCcCcEEEEEeCCHH-------HHHHHHHHhhccccccccccc
Q 013210 317 MKKLG-------LKVLYPGLED-HPHHELLKSMANKEYGFGGLLCLDMETEE-------KANRLMNYLQNYAQFGFMAVS 381 (447)
Q Consensus 317 L~~~~-------~~v~~p~~~~-~p~~~l~~~~~~~~~g~g~~~~~~l~~~~-------~~~~l~~~l~~~~~~g~~~vs 381 (447)
|++++ .+++.+.... .+ ...+++++|.+.+.. .+..+. .. +| |.+.
T Consensus 356 L~~l~~~~g~~~v~iyg~~~~~~~~------------~~r~~ivsFnv~~~~~~~v~~~~v~~l~---~~---~g-I~vR 416 (805)
T PLN02724 356 LRNLKHGNGAPVCVLYGNHTFKLEF------------HIQGPIVTFNLKRADGSWVGHREVEKLA---SL---SG-IQLR 416 (805)
T ss_pred HHhccCCCCCeEEEEcCCCCCCCCc------------ccccCEEEEEEEcCCCCEeCHHHHHHHH---Hh---cC-cEEe
Confidence 98764 2444332000 00 025779999987421 122222 22 34 6888
Q ss_pred ccCccccccccccccCCCCCHHHHH---------------hcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 382 LGYYETLMSCSGSSTSSELNAEEKA---------------LAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 382 ~G~~~s~~~~~a~~~~~~~~~~~~~---------------~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
.|..|.- ++|..+..+..+.+. -.+...+.||+|+| ..++.++|+.|.++|++.
T Consensus 417 ~G~~Ca~---~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g-~ynt~eDvd~lv~~l~~~ 485 (805)
T PLN02724 417 TGCFCNP---GACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFG-YMSTFEDCQKFIDFIISS 485 (805)
T ss_pred eccccCc---hHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcC-ccCCHHHHHHHHHHHHHH
Confidence 8865532 122111112221111 01223489999999 999999999999999874
No 161
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2.6e-25 Score=219.66 Aligned_cols=235 Identities=14% Similarity=0.160 Sum_probs=168.0
Q ss_pred hHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC----
Q 013210 100 TVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS---- 173 (447)
Q Consensus 100 ~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~---- 173 (447)
....+++.+|+.++. +.+++|+|+++++.+++++++++||.|+++.|+|+.+..... ..|..+..++.+
T Consensus 66 ~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~-----~~g~~~~~~~l~~~~~ 140 (357)
T PRK14809 66 SHADLTAALADRWDVSPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSAR-----YHHGEVREYPVSKADD 140 (357)
T ss_pred CHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHH-----HcCCeEEEEecccCcC
Confidence 356899999999875 459999999999999999999999999999999986655442 145555554432
Q ss_pred ---CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhc--CCEEEEeCCCCCCCCCcc------CCCCeEEEe
Q 013210 174 ---DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK--GVTVVVDNTFSPLVLSPA------RLGADVVVH 242 (447)
Q Consensus 174 ---d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~--gi~livD~~~~~~~~~~~------~~g~di~~~ 242 (447)
+.+++++.. +++++|++++||||||.+.+.+++.++++.. ++++|+||+|..+...+. ..+..+++.
T Consensus 141 ~~~~~~~~~~~~--~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~ 218 (357)
T PRK14809 141 FEQTADTVLDAY--DGERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLR 218 (357)
T ss_pred CCcCHHHHHHhh--cCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEe
Confidence 456665544 3589999999999999999988777777643 789999999966543221 124678999
Q ss_pred CCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC
Q 013210 243 SISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL 322 (447)
Q Consensus 243 S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~ 322 (447)
||||.+|.+|.|+ ||+++++++++.+...+.. ...+.+.+.++..++...+++....+.+.++++.+.+.|...
T Consensus 219 SfSK~~~~~GlRi-G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-- 292 (357)
T PRK14809 219 TFSKAYGLAGLRL-GYAVVPEEWADAYARVNTP---FAASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP-- 292 (357)
T ss_pred cchhHhcCcchhh-eeeecCHHHHHHHHHhCCC---CCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc--
Confidence 9999999999999 9999999999888765431 222333334444444333334455566777777787777542
Q ss_pred eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 323 KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 323 ~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
..| ..|.++++.+++ ...|.+.|..
T Consensus 293 --~~~-------------------~~g~f~~~~~~~---~~~~~~~l~~ 317 (357)
T PRK14809 293 --TWE-------------------SAGNFVLAEVGD---ASAVAEAAQE 317 (357)
T ss_pred --cCC-------------------CCCCEEEEECCC---HHHHHHHHHH
Confidence 112 145688888863 3456666654
No 162
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=7.4e-25 Score=214.18 Aligned_cols=237 Identities=16% Similarity=0.181 Sum_probs=174.9
Q ss_pred CchHHHHHHHHHHHhC-----CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 98 NPTVLNLSRQMAALEG-----TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g-----~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
.+...++++.+|+.++ .+.+++|+|+++++.++++++ |.|++..|+|+.+...+. ..|.++..++.
T Consensus 55 ~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~----d~v~v~~P~y~~~~~~~~-----~~g~~~~~v~~ 125 (335)
T PRK14808 55 DSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAK-----AVGAKFLEVPL 125 (335)
T ss_pred CCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh----CcEEECCCCHHHHHHHHH-----HcCCeEEEecC
Confidence 3446789999999987 456999999999999999876 679999999999988773 36888888876
Q ss_pred CCHHHH-HHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCC-Cc----cCCCCeEEEeCCCc
Q 013210 173 SDHEMV-NSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVL-SP----ARLGADVVVHSISK 246 (447)
Q Consensus 173 ~d~~~l-~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~-~~----~~~g~di~~~S~sK 246 (447)
++--.+ +..+ .++++|++++||||||.+.+.+++.+++ ++++++|+||+|..+.. .. ......+++.|+||
T Consensus 126 ~~~~~~~~~~~--~~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK 202 (335)
T PRK14808 126 TKDLRIPEVNV--GEGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSK 202 (335)
T ss_pred CCcCCCChhHc--cCCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechh
Confidence 411001 1113 3578999999999999999999999998 58999999999965531 11 12346799999999
Q ss_pred cccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeC
Q 013210 247 FISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLY 326 (447)
Q Consensus 247 ~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~ 326 (447)
.+|.+|.|+ ||+++++++++.+...+.. ...+.+++.++..++...+...+..+.+.++++.+.+.|++.+..+..
T Consensus 203 ~~~l~GlRv-G~~v~~~~~~~~l~~~~~~---~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~ 278 (335)
T PRK14808 203 AFSLAAQRI-GYVVSSEKFIDAYNRVRLP---FNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYRITD 278 (335)
T ss_pred hccCcccce-EEEEeCHHHHHHHHHhcCC---CCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
Confidence 999999999 9999999999988766531 223334444444444433345556667778888999999887655432
Q ss_pred CCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 327 PGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 327 p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
| .|+++++.++..+ ...+.+.|..
T Consensus 279 ~--------------------~g~f~~~~l~~~~-~~~~~~~l~~ 302 (335)
T PRK14808 279 S--------------------RGNFVFIFMEKEE-KERLLEHLRA 302 (335)
T ss_pred C--------------------CCeEEEEeCCCcc-HHHHHHHHHH
Confidence 2 3668899987433 3567777765
No 163
>PRK07908 hypothetical protein; Provisional
Probab=99.94 E-value=4.1e-24 Score=210.50 Aligned_cols=270 Identities=16% Similarity=0.171 Sum_probs=187.2
Q ss_pred hHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC----
Q 013210 100 TVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS---- 173 (447)
Q Consensus 100 ~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~---- 173 (447)
....+|+.+|++++. +++++|+|+++++..+++ +.+| .+++..|.|..+...++ ..|.++..++.+
T Consensus 59 g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l~~~-~viv~~P~y~~~~~~~~-----~~G~~i~~v~~~~~~~ 130 (349)
T PRK07908 59 DERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--LRPR-RAAVVHPSFTEPEAALR-----AAGIPVHRVVLDPPFR 130 (349)
T ss_pred chHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--cCCC-eEEEeCCCChHHHHHHH-----HcCCEEEeeccCcccC
Confidence 346899999999975 459999999999999887 4564 67778999988876652 268888777654
Q ss_pred -CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCC----c--cCCCCeEEEeCCCc
Q 013210 174 -DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLS----P--ARLGADVVVHSISK 246 (447)
Q Consensus 174 -d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~----~--~~~g~di~~~S~sK 246 (447)
|++ .+ +++++++++++|+||||.+.+.++|.++|+ ++.++|+||+|..+... . ...+..+++.|+||
T Consensus 131 ~d~~----~l-~~~~~~i~l~np~NPTG~~~~~~~l~~l~~-~~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK 204 (349)
T PRK07908 131 LDPA----AV-PDDADLVVIGNPTNPTSVLHPAEQLLALRR-PGRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTK 204 (349)
T ss_pred cChh----Hh-ccCCCEEEEcCCCCCCCCCcCHHHHHHHHh-cCCEEEEECcchhhccCCccccccccCCCEEEEeeccc
Confidence 333 34 457899999999999999999999999996 47889999998544211 1 12245688889999
Q ss_pred cccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHH-HHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCCe
Q 013210 247 FISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFE-LSE--RIPHLGLRMKEHCHRALIFARRMKKLGLK 323 (447)
Q Consensus 247 ~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~-~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~ 323 (447)
.+|.+|.|+ ||++.++++++.+..... ....+...+.+.. .+. ..+++....+++.++++++.+.|++++.+
T Consensus 205 ~~~l~GlRi-G~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 279 (349)
T PRK07908 205 TWSLAGLRV-GYALGAPDVLARLTRGRA----HWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGAR 279 (349)
T ss_pred ccCCcccee-eeeecCHHHHHHHHhcCC----CCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcE
Confidence 999999998 999999999988876544 1222222222222 222 12345556677888999999999887555
Q ss_pred eeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHH
Q 013210 324 VLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAE 403 (447)
Q Consensus 324 v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~ 403 (447)
+..|. .|.++++.+++ ...+.+.|... | +.+.-|... +
T Consensus 280 ~~~p~-------------------~g~~~~~~~~~---~~~~~~~l~~~---g-I~v~~g~~f-----~----------- 317 (349)
T PRK07908 280 VVDPA-------------------AAPFVLVRVPD---AELLRKRLRER---G-IAVRRGDTF-----P----------- 317 (349)
T ss_pred eccCC-------------------CceEEEEECCc---HHHHHHHHHhC---C-EEEEECCCC-----C-----------
Confidence 54332 46799999875 24555556542 3 455544211 0
Q ss_pred HHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHH
Q 013210 404 EKALAGISAGLVRMSVGYLGTLDQRWSQFEKA 435 (447)
Q Consensus 404 ~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~a 435 (447)
+..+++||||++..++.+.+++.|.+.
T Consensus 318 -----~~~~~~vRis~~~~~~~~~l~~al~~~ 344 (349)
T PRK07908 318 -----GLDPDYLRLAVRPRAEVPVLVQALAEI 344 (349)
T ss_pred -----CCCCCeEEEEeCCCccHHHHHHHHHHH
Confidence 123578999999324555555555443
No 164
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=5.6e-25 Score=215.39 Aligned_cols=209 Identities=14% Similarity=0.149 Sum_probs=157.3
Q ss_pred CchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC--
Q 013210 98 NPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-- 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-- 173 (447)
.+....+|+.+|++++. +.+++|+|+++++..++..+ +||+|+++.|.|+.+...+. ..|.++..++.+
T Consensus 54 ~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~gd~V~v~~P~y~~~~~~~~-----~~g~~~~~v~~~~~ 126 (337)
T PRK03967 54 HITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF--EGKHIVITPPTFGMYSFYAK-----LNGIPVIDVPLKED 126 (337)
T ss_pred CCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh--CCCeEEEeCCChHHHHHHHH-----HcCCeEEEeecCCC
Confidence 34557899999999985 45999999999999888765 69999999999987765542 267787777653
Q ss_pred ---CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCc-----cCCCCeEEEeCCC
Q 013210 174 ---DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSP-----ARLGADVVVHSIS 245 (447)
Q Consensus 174 ---d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~-----~~~g~di~~~S~s 245 (447)
|++++++.+ ++++++++++|+||||.+.+.++|.++++ +++++|+|++|..+.... ......+++.|+|
T Consensus 127 ~~~d~~~l~~~~--~~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~S 203 (337)
T PRK03967 127 FTIDGERIAEKA--KNASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFS 203 (337)
T ss_pred CCcCHHHHHHhc--cCCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcccchHHHHhhCCCEEEEecch
Confidence 678888755 47889999999999999999999999995 799999999996553211 1124578999999
Q ss_pred ccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhC
Q 013210 246 KFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKL 320 (447)
Q Consensus 246 K~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~ 320 (447)
|.||.+|.|+ ||+++++++++.+...... ...+.+.+.++..++...+.+.+..+.+.++++.+.+.|.+.
T Consensus 204 K~~~l~GlRi-G~iv~~~~~i~~~~~~~~~---~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 274 (337)
T PRK03967 204 KAFGLAGIRA-GYAIANEEIIDALYRIKPP---FSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY 274 (337)
T ss_pred Hhhcchhhhh-eeeecCHHHHHHHHhhcCC---CCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999 9999999999888876541 122233344444444333334455556667777788877653
No 165
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.94 E-value=1.3e-24 Score=215.81 Aligned_cols=311 Identities=14% Similarity=0.122 Sum_probs=213.8
Q ss_pred ccccccCCH-HHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhcC----C
Q 013210 65 SATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLCS----S 137 (447)
Q Consensus 65 att~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~~----~ 137 (447)
++|+..|.+ +.+.+.+...++++.. |. ......+++++.+|+++|.+ .+++++||++|+..++.++.. +
T Consensus 28 ~~~~~~~~~~~a~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~ 103 (371)
T PRK13520 28 MCTEPHPIARKAHEMFLETNLGDPGL---FP-GTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAE 103 (371)
T ss_pred eecCchHHHHHHHHHHHhcCCCCccc---Cc-cHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCC
Confidence 356666664 7777777665565432 21 12334578999999999975 378999999999999877643 4
Q ss_pred CCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHH
Q 013210 138 GGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLA 212 (447)
Q Consensus 138 gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la 212 (447)
+++|+++.++|.++...+. . .|.++..++.+ |+++|++++ ++++++|++.+++|++|.+.|+++|.++|
T Consensus 104 ~~~vl~~~~~h~s~~~~~~----~-~g~~~~~v~~~~~~~~d~~~l~~~i-~~~~~~vi~~~~~~~tG~~~~l~~I~~l~ 177 (371)
T PRK13520 104 KPNIVVPESAHFSFDKAAD----M-LGVELRRAPLDDDYRVDVKAVEDLI-DDNTIGIVGIAGTTELGQVDPIPELSKIA 177 (371)
T ss_pred CceEEecCcchHHHHHHHH----H-cCceEEEecCCCCCcCCHHHHHHHH-hhCCEEEEEEcCCcCCcccCCHHHHHHHH
Confidence 7899999999988766552 2 57788877753 899999999 67788888888899999999999999999
Q ss_pred HhcCCEEEEeCCCCCCC--C-------CccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhh-----
Q 013210 213 HDKGVTVVVDNTFSPLV--L-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALM----- 278 (447)
Q Consensus 213 ~~~gi~livD~~~~~~~--~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~----- 278 (447)
+++|+++|+|++|+.+. + +....++|.++.|.||+..+ +.++|++++.++++++.+..... +..
T Consensus 178 ~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a-~~~~G~~~~~~~~~~~~l~~~~~-~~~~~~~~ 255 (371)
T PRK13520 178 LENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLA-PIPAGGILFRDESYLDALAVDTP-YLTSKKQA 255 (371)
T ss_pred HHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCc-cCCceEEEEcCHHHHHhhcccCc-cccCCCCc
Confidence 99999999999995332 1 11234789999999998654 34565566677777766542111 000
Q ss_pred -hcCC--CccHHHHHHHHccC--CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013210 279 -LLGP--TMNPKVAFELSERI--PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLC 353 (447)
Q Consensus 279 -~~g~--~~~~~~a~~~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 353 (447)
..|+ ......+..++..+ ..+.++.++..++++++.+.|++.++++..+. ..+++.
T Consensus 256 ~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-------------------~~~~v~ 316 (371)
T PRK13520 256 TLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIEP-------------------VLNIVA 316 (371)
T ss_pred ceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCC-------------------CceEEE
Confidence 0111 11222333333332 23455778889999999999988876633221 123888
Q ss_pred EEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHH
Q 013210 354 LDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFE 433 (447)
Q Consensus 354 ~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~ 433 (447)
+.+++ ...+.+.|... | +.++.. . .++.+|+|++ ..+++++++.+.
T Consensus 317 ~~~~~---~~~v~~~L~~~---g-i~v~~~-----------~---------------~~~~iRis~~-~~~t~edi~~~~ 362 (371)
T PRK13520 317 FDDPN---PDEVREKLRER---G-WRVSVT-----------R---------------CPEALRIVCM-PHVTREHIENFL 362 (371)
T ss_pred EecCC---HHHHHHHHHHC---C-ceeccC-----------C---------------CCCEEEEEEE-CCCCHHHHHHHH
Confidence 88763 45666666642 2 333321 0 1357999999 888999999999
Q ss_pred HHHHHhh
Q 013210 434 KALSRMQ 440 (447)
Q Consensus 434 ~al~~~~ 440 (447)
++|+++.
T Consensus 363 ~~l~~~~ 369 (371)
T PRK13520 363 EDLKEVK 369 (371)
T ss_pred HHHHHHh
Confidence 9987753
No 166
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.94 E-value=3.6e-24 Score=215.34 Aligned_cols=291 Identities=17% Similarity=0.188 Sum_probs=200.8
Q ss_pred CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC--CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCC
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCS--SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISD 174 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d 174 (447)
..+...++++++|+++|.+..+++++|++|+..++..+.. +++.|+.....|.+....+. ..+.++..++..|
T Consensus 89 ~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~-----~~~~~~~~~~~~d 163 (407)
T PRK09064 89 TNHYHVELERELADLHGKEAALVFTSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIR-----RSRCEKHIFRHND 163 (407)
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHH-----HcCCcEEEECCCC
Confidence 3677899999999999988889999999999999887654 66666666666665555442 1456666677778
Q ss_pred HHHHHHhhcc---CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCC-CCCC-C------ccC--CCCeEEE
Q 013210 175 HEMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PLVL-S------PAR--LGADVVV 241 (447)
Q Consensus 175 ~~~l~~~i~~---~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~~~-~------~~~--~g~di~~ 241 (447)
++++++.++. +++++|++++++|++|.+.|+++|.++|+++|+++|+||+|+ ++.. . ... ...|+++
T Consensus 164 ~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~ 243 (407)
T PRK09064 164 VAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIE 243 (407)
T ss_pred HHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEE
Confidence 8888887731 568999999999999999999999999999999999999994 3211 1 011 1358999
Q ss_pred eCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHH---HHHccCCcHHHHHHHHHHHHHHHHHHHH
Q 013210 242 HSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAF---ELSERIPHLGLRMKEHCHRALIFARRMK 318 (447)
Q Consensus 242 ~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~---~~~~~~~~l~~~~~~~~~~~~~l~~~L~ 318 (447)
.|+||.+|+.| ||+++++++++.+........ .....++..+. ..+..++......+++.++++++.+.|+
T Consensus 244 ~t~sKa~g~~G----G~~~~~~~~~~~l~~~~~~~~--~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~ 317 (407)
T PRK09064 244 GTLAKAFGVMG----GYIAGSAALVDAVRSYAPGFI--FTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALD 317 (407)
T ss_pred EecchhhhccC----ceEecCHHHHHHHHHhCcccc--ccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999764 899999998888766543221 12222222222 2222222223345678889999999998
Q ss_pred hCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCC
Q 013210 319 KLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSS 398 (447)
Q Consensus 319 ~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~ 398 (447)
+.+.++..+ .++++.+.+++...+..+.+.|... .| +.+... ..|...
T Consensus 318 ~~g~~~~~~--------------------~~~iv~i~~~~~~~~~~l~~~L~~~--~g-i~v~~~------~~p~~~--- 365 (407)
T PRK09064 318 AAGIPVMPN--------------------ESHIVPVMVGDPEKCKKASDMLLEE--HG-IYVQPI------NYPTVP--- 365 (407)
T ss_pred HcCCCCCCC--------------------CCCEEEEEeCCHHHHHHHHHHHHHh--CC-EEEeeE------CCCCCC---
Confidence 876543211 2447888887544566777776431 23 333221 112110
Q ss_pred CCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhc
Q 013210 399 ELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDS 442 (447)
Q Consensus 399 ~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~ 442 (447)
...+.||||++ ..+++++++.+.++|+++.+.
T Consensus 366 -----------~~~~~lRis~~-~~~t~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 366 -----------RGTERLRITPT-PFHTDEMIDHLVEALVEVWAR 397 (407)
T ss_pred -----------CCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHH
Confidence 11357999999 888888899888888876543
No 167
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.94 E-value=5.8e-25 Score=221.05 Aligned_cols=245 Identities=11% Similarity=0.120 Sum_probs=165.8
Q ss_pred hHHHHHHHHHHHh------C--CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCee-----
Q 013210 100 TVLNLSRQMAALE------G--TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNIT----- 166 (447)
Q Consensus 100 ~~~~l~~~ia~l~------g--~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~----- 166 (447)
....||+.+|+++ + .+.+++|+|+++++.+++ .++.+||+|++.+|+|+.+...+.. .|.+
T Consensus 77 G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~-----~g~~~~~~~ 150 (409)
T PRK07590 77 GYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVM-----AGRTGEANE 150 (409)
T ss_pred CCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHH-----cCCcccccc
Confidence 3457888888874 2 356999999999999864 5678999999999999999877732 3443
Q ss_pred ------EEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----
Q 013210 167 ------TTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP----- 232 (447)
Q Consensus 167 ------~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~----- 232 (447)
+..++.+.-+.+...+..+++++|++++|+||||.+++ +++|+++|++||+++|+||+|..+.++.
T Consensus 151 ~~~~~~~~~v~~~~~~~~~~d~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~ 230 (409)
T PRK07590 151 DGRYSGIVYLPCTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHS 230 (409)
T ss_pred cccccceeEeecccccCCcccCcccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcc
Confidence 66666531112222232367899999999999999987 5578888999999999999996554321
Q ss_pred -cCC----CCeEEEeCCCccccCCCCeeEEEEEcChHHHHHH-----------HHHhhhhhhhcCCCccHHHHHHHHcc-
Q 013210 233 -ARL----GADVVVHSISKFISGGADIIAGAVCGPANLVNSM-----------MDLHQGALMLLGPTMNPKVAFELSER- 295 (447)
Q Consensus 233 -~~~----g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l-----------~~~~~~~~~~~g~~~~~~~a~~~~~~- 295 (447)
..+ +..+++.||||.+|.+|.|+ ||+++++++++.+ ............+.+.+.++..++..
T Consensus 231 ~~~~~~~~~~vi~~~SfSK~~~~pGlRi-G~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~ 309 (409)
T PRK07590 231 IYEIEGARECAIEFRSFSKTAGFTGTRC-AYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPE 309 (409)
T ss_pred hhhCCCcccceEEEecCccccCCcCcee-EEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCC
Confidence 111 24688999999999999999 9999999888632 11111000011222334444343432
Q ss_pred -CCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhh
Q 013210 296 -IPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQ 370 (447)
Q Consensus 296 -~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~ 370 (447)
..++....+.+.++++.+.+.|++++..+..|. .|.++|+.++.......+...+.
T Consensus 310 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-------------------g~~f~wi~~~~~~~~~~~~~~l~ 366 (409)
T PRK07590 310 GKAQIKELIDYYMENAKIIREGLESAGFEVYGGV-------------------NAPYIWVKTPDGMSSWDFFDKLL 366 (409)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC-------------------cceEEEEECCCCCCHHHHHHHHH
Confidence 234455566788899999999998765443221 35689999974322345555543
No 168
>PRK06855 aminotransferase; Validated
Probab=99.94 E-value=3.8e-24 Score=216.25 Aligned_cols=230 Identities=16% Similarity=0.151 Sum_probs=160.4
Q ss_pred HHHHHHHHHHh----C----CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC-
Q 013210 102 LNLSRQMAALE----G----TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI- 172 (447)
Q Consensus 102 ~~l~~~ia~l~----g----~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~- 172 (447)
.++|+.+|+++ | .+++++|+|+++|+..++. ++.+||.|++..|+|+.+..... . ..|..+..++.
T Consensus 76 ~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~-~---~~g~~~v~v~~~ 150 (433)
T PRK06855 76 LETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEA-A---HAGYPPVTYRLD 150 (433)
T ss_pred HHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHH-H---hcCCeEEEEecc
Confidence 56778888775 3 2469999999999999985 78899999999999998653321 1 13555555432
Q ss_pred ------CCHHHHHHhhcc-CCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------cCC-
Q 013210 173 ------SDHEMVNSAIVQ-GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------ARL- 235 (447)
Q Consensus 173 ------~d~~~l~~~i~~-~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~~~- 235 (447)
.|+++|+++++. ++++++++++|+||||.+.+ +++|+++|++||+++|+||+|..+.++. ..+
T Consensus 151 ~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~ 230 (433)
T PRK06855 151 PENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVI 230 (433)
T ss_pred cccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHc
Confidence 278999998832 46899999999999999997 5678888999999999999997665421 111
Q ss_pred --CCeEEEeCCCccccCCCCeeEEEEEcC-----hH---HHHHHHHHhhhhhhhcCCCccHHHHHHHHccC---CcHHHH
Q 013210 236 --GADVVVHSISKFISGGADIIAGAVCGP-----AN---LVNSMMDLHQGALMLLGPTMNPKVAFELSERI---PHLGLR 302 (447)
Q Consensus 236 --g~di~~~S~sK~~g~~g~~igG~l~~~-----~~---~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~---~~l~~~ 302 (447)
+..+++.|+||.++.+|+|+ ||++.+ +. +++.+..... .....+.+.+.++..++... +++.+.
T Consensus 231 ~~~~~I~~~S~SK~~~~pGlRi-G~ii~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~ 307 (433)
T PRK06855 231 GDVPGIALKGISKELPWPGSRC-GWIEVYNADKDEVFKKYINSILNAKM--IEVCSTTLPQMAIPRIMSHPEYKNYLKER 307 (433)
T ss_pred CcCCeEEEecCccccCCCcceE-EEEEEeCCchhhHHHHHHHHHHHhhc--cccCCChHHHHHHHHhhcCCcHHHHHHHH
Confidence 24589999999999999999 999862 22 2233322221 11223444454544444432 235556
Q ss_pred HHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013210 303 MKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 358 (447)
Q Consensus 303 ~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 358 (447)
.+.++++++.+.+.|++.+ ..+..|. .|.++|+.++.
T Consensus 308 ~~~~~~r~~~~~~~L~~~~~~~~~~p~-------------------gg~~~w~~l~~ 345 (433)
T PRK06855 308 NKRYEKRSNIAYEKLKDVPGLKVNRTN-------------------GAFYMTVVFED 345 (433)
T ss_pred HHHHHHHHHHHHHHHhcCCCeeccCCC-------------------eeEEEeecccc
Confidence 6778899999999998763 2333222 46688988874
No 169
>PLN02721 threonine aldolase
Probab=99.94 E-value=1.4e-24 Score=214.19 Aligned_cols=285 Identities=17% Similarity=0.212 Sum_probs=197.1
Q ss_pred CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC-CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC--
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCS-SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-- 173 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~-~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-- 173 (447)
.++...++|+.+|+++|.+.++++++|++++..++.+++. +||+|++++++|.+.+... .... ..|.++.+++.+
T Consensus 38 ~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~-~~g~~~~~v~~~~~ 115 (353)
T PLN02721 38 YDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENG-GIST-LGGVHPRTVKNNED 115 (353)
T ss_pred CCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHccCCCCeEEEcCccceehhccc-chhh-hcCceeEecCCCcC
Confidence 3566789999999999998899999999999888888777 8999999999986555420 0111 268888877643
Q ss_pred ---CHHHHHHhhcc------CCceEEEEEcC-CCCCccccC---HHHHHHHHHhcCCEEEEeCCCC--CC---CCCcc--
Q 013210 174 ---DHEMVNSAIVQ------GRTKVLYFESI-SNPTLAVAN---IPELSRLAHDKGVTVVVDNTFS--PL---VLSPA-- 233 (447)
Q Consensus 174 ---d~~~l~~~i~~------~~t~lV~i~~~-~NptG~v~~---l~~I~~la~~~gi~livD~~~~--~~---~~~~~-- 233 (447)
|++++++++.. +++++|+++++ +||+|.+.| +++|.++|+++|+++|+|++|. .. ..++.
T Consensus 116 ~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~ 195 (353)
T PLN02721 116 GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRL 195 (353)
T ss_pred CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHH
Confidence 89999999832 58999999875 678999876 7899999999999999999872 11 12222
Q ss_pred CCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCcc--HHHHHHHHccCCcHHHHHHHHHHHHH
Q 013210 234 RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMN--PKVAFELSERIPHLGLRMKEHCHRAL 311 (447)
Q Consensus 234 ~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~--~~~a~~~~~~~~~l~~~~~~~~~~~~ 311 (447)
..++|.++.|+||+++++ +|+++++++++++.+...+. ..+..+. ...+...+..++...+++++..++++
T Consensus 196 ~~~~d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 268 (353)
T PLN02721 196 VKAADSVSVCLSKGLGAP---VGSVIVGSKSFIRKAKRLRK----TLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAK 268 (353)
T ss_pred hhhCCEEEEecccccCCc---eeeEEecCHHHHHhHHHHHH----hcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 226889999999999864 44567888998887766544 1221111 11222222233343445555667788
Q ss_pred HHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhcccccccccccccCcccc
Q 013210 312 IFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQNYAQFGFMAVSLGYYETL 388 (447)
Q Consensus 312 ~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~l~~~l~~~~~~g~~~vs~G~~~s~ 388 (447)
++.+.|++++ ..+.... | .++++++.++.. .....+.+.|... | +.+..+
T Consensus 269 ~l~~~L~~~~~~~~~~~~----~--------------~~~~~~~~~~~~~~~~~~~~~~~L~~~---g-i~v~~~----- 321 (353)
T PLN02721 269 LLAEGLNQIKGLRVNVAA----V--------------ETNIVYFDITDGSRITAEKLCKSLEEH---G-VLLMPG----- 321 (353)
T ss_pred HHHHHHHhCCCcEEecCC----c--------------cceEEEEEccCCccccHHHHHHHHHhC---C-cEEecC-----
Confidence 9999998873 3331111 1 245888888642 2356777777753 3 333322
Q ss_pred ccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 389 MSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 389 ~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
..+.||++++ ...+++.++.+.++|+++-
T Consensus 322 ----------------------~~~~lR~~~~-~~~~~~~i~~~~~~l~~~~ 350 (353)
T PLN02721 322 ----------------------NSSRIRVVTH-HQISDSDVQYTLSCFQQAA 350 (353)
T ss_pred ----------------------CCceEEEEec-CcCCHHHHHHHHHHHHHHh
Confidence 1357999999 7778888888888887653
No 170
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.94 E-value=4.1e-24 Score=207.70 Aligned_cols=308 Identities=18% Similarity=0.231 Sum_probs=228.7
Q ss_pred HHHHHhhcCC-CCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHH
Q 013210 74 ETMRRMFAGE-LGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTH 152 (447)
Q Consensus 74 ~~~~~~~~~~-~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~ 152 (447)
+++.+.++.. .|-..+...+| ..+...+||++||+++|.+.+++++||..||..++.++++++|-|+.....|-+.+
T Consensus 60 ~a~~~~~~~~g~g~~gsR~i~G--~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASii 137 (388)
T COG0156 60 EAAKAAIRRYGVGAGGSRLISG--TSDLHVELEEELADFLGAEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASII 137 (388)
T ss_pred HHHHHHHHHhCCCCCCcCcccC--CcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHH
Confidence 4444444432 22222333344 45777899999999999999999999999999999999999999999999998887
Q ss_pred HHHHhhcCcccCeeEEEeCCCCHHHHHHhhccC-----CceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC-C
Q 013210 153 ALLTHFFPRACNITTTFVDISDHEMVNSAIVQG-----RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-S 226 (447)
Q Consensus 153 ~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-----~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~ 226 (447)
+.++ ..+.++..+..+|+++||+.+++. +.++|+++.+.++.|.+.||++|.+++++|++++++||+| .
T Consensus 138 dG~r-----ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~ 212 (388)
T COG0156 138 DGIR-----LSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAV 212 (388)
T ss_pred HHHH-----hCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccc
Confidence 7762 367788888889999999998431 3589999999999999999999999999999999999999 3
Q ss_pred CCCC-C---------ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHH---HH
Q 013210 227 PLVL-S---------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFE---LS 293 (447)
Q Consensus 227 ~~~~-~---------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~---~~ 293 (447)
++.. . ...-.+|++++|++|.+|.. ||++.++..+++.+....... .+.+.++|..+.. .+
T Consensus 213 Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~----Gg~v~g~~~~~d~L~~~ar~~--ifStalpP~~aaa~~~al 286 (388)
T COG0156 213 GVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSS----GGYIAGSAALIDYLRNRARPF--IFSTALPPAVAAAALAAL 286 (388)
T ss_pred cccCCCCccHHHHhCCCCccceEEEEEchhhhccc----CceeeCcHHHHHHHHHhCCce--eccCCCCHHHHHHHHHHH
Confidence 3321 1 11123589999999999954 599999999999988765544 4444555554333 34
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccc
Q 013210 294 ERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYA 373 (447)
Q Consensus 294 ~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~ 373 (447)
+.++...++.++++++..++.+.++..++.+. +. ..+++.+.+.+...+..+...|...
T Consensus 287 ~~l~~~~~~r~~L~~~~~~~~~~~~~~~~~~~-~s-------------------~s~I~pv~~gd~~~a~~~s~~l~~~- 345 (388)
T COG0156 287 RILEEGPERRERLQELAAFFRSLLKALGLVLL-PS-------------------ESPIIPVILGDEERALEASRALLEE- 345 (388)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHhcCCccC-CC-------------------CCCeeeeEeCCHHHHHHHHHHHHHC-
Confidence 44455566788888888888877766555331 11 2339999999877788888877752
Q ss_pred ccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 374 QFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 374 ~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
| +. .+.+.+|.... ....||+|+. ..++++.|+.+.++|.++
T Consensus 346 --G-i~------v~~i~~PTVp~--------------gtarlRi~lt-a~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 346 --G-IY------VSAIRPPTVPK--------------GTARLRITLT-AAHTEEDIDRLAEALSEV 387 (388)
T ss_pred --C-ee------EeeecCCCCCC--------------CcceEEEEec-CCCCHHHHHHHHHHHHhh
Confidence 2 22 22334454431 2367999999 999999999999998764
No 171
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.94 E-value=2e-24 Score=213.56 Aligned_cols=276 Identities=13% Similarity=0.069 Sum_probs=188.6
Q ss_pred hHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC----
Q 013210 100 TVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS---- 173 (447)
Q Consensus 100 ~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~---- 173 (447)
....+++.||++++. +.+++|+|+++++.++++++. +||.|+++.|+|+.+...+. ..|.++..++.+
T Consensus 58 ~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l~-~g~~vlv~~P~y~~~~~~~~-----~~g~~~~~v~~~~~~~ 131 (360)
T PRK07392 58 DYRELRLALAQHHQLPPEWILPGNGAAELLTWAGRELA-QLRAVYLITPAFGDYRRALR-----AFGATVKELPLPLDQP 131 (360)
T ss_pred CHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhC-CCCeEEEECCCcHHHHHHHH-----HcCCeEEEEecccccC
Confidence 346899999999876 459999999999999998764 68899999999999987773 257777766543
Q ss_pred ------CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCc-----c----CCCCe
Q 013210 174 ------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSP-----A----RLGAD 238 (447)
Q Consensus 174 ------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~-----~----~~g~d 238 (447)
+++++++.. .+++++++++||||||.+.+.++|.++++++++ +|+||+|..+..+. . .....
T Consensus 132 ~~~~~~~~~~~~~~~--~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~v 208 (360)
T PRK07392 132 SPGLTLRLQTLPPQL--TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNL 208 (360)
T ss_pred CcccccCHHHHHHhc--cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCE
Confidence 345554433 468899999999999999999999999999985 66699996654321 1 12457
Q ss_pred EEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH
Q 013210 239 VVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMK 318 (447)
Q Consensus 239 i~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~ 318 (447)
+++.|+||.+|.+|.|+ ||+++++++++.+...+.. ...+.+.+.++..++..........+.+.++++++.+.|+
T Consensus 209 i~i~S~SK~~~l~GlRi-G~~v~~~~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~ 284 (360)
T PRK07392 209 IILRSLTKFYSLPGLRL-GYAIAHPDRLQRWQQWRDP---WPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLA 284 (360)
T ss_pred EEEEechhhhcCCchhe-eeeeCCHHHHHHHHhhCCC---CCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999998887655431 1223333444444443322233334557788888999998
Q ss_pred hCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHh-hcccccccccccccCcccccccccccc
Q 013210 319 KLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYL-QNYAQFGFMAVSLGYYETLMSCSGSST 396 (447)
Q Consensus 319 ~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l-~~~~~~g~~~vs~G~~~s~~~~~a~~~ 396 (447)
+++. .+ .| +.|.++++.++. ...++...+ .. .| +.+..|... .
T Consensus 285 ~~~~~~~-~~-------------------~~~~fl~~~~~~--~~~~l~~~ll~~---~g-v~v~pg~~f--------~- 329 (360)
T PRK07392 285 SLPGLTP-LP-------------------SAANFLLVQSQG--SALQLQEKLLQQ---HR-ILIRDCLSF--------P- 329 (360)
T ss_pred hCCCcEE-CC-------------------CCCCEEEEEcCC--CHHHHHHHHHhh---CC-EEEEeCCCC--------C-
Confidence 7633 33 22 135688888764 244565553 33 23 344444211 0
Q ss_pred CCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 397 SSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 397 ~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+..++++|||++ ..+ ..+.|.++|+++
T Consensus 330 ------------~~~~~~iRi~~~-~~~---~~~~l~~al~~~ 356 (360)
T PRK07392 330 ------------ELGDRYFRVAVR-TEA---ENQRLLEALAAI 356 (360)
T ss_pred ------------CCCCCEEEEEeC-CHH---HHHHHHHHHHHH
Confidence 112579999999 532 223555555544
No 172
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.94 E-value=5.6e-24 Score=212.44 Aligned_cols=295 Identities=16% Similarity=0.121 Sum_probs=202.4
Q ss_pred ccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEe
Q 013210 91 FIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 170 (447)
Q Consensus 91 ~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v 170 (447)
|.+-+...+..+++++++++++|.+..+++++|++++..++.+++++||.|+++.+.|+++...+. ..|.++..+
T Consensus 70 ~~~~~g~~~l~~~l~~~l~~~~g~~~~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~-----~~g~~~~~~ 144 (385)
T TIGR01825 70 VRTIAGTLRLHEELEEKLAKFKKTEAALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDGLR-----LTKATKKIY 144 (385)
T ss_pred cCcccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHH-----hcCCceEEe
Confidence 333344467788999999999998777777788999999999999999999999999998866552 246676666
Q ss_pred CCCCHHHHHHhhcc---CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCC----------ccCCCC
Q 013210 171 DISDHEMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLS----------PARLGA 237 (447)
Q Consensus 171 ~~~d~~~l~~~i~~---~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~----------~~~~g~ 237 (447)
+..|++++++.++. +++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+.+. ....++
T Consensus 145 ~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 224 (385)
T TIGR01825 145 KHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKV 224 (385)
T ss_pred CCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCC
Confidence 66788888887732 36899999999999999999999999999999999999999433211 112468
Q ss_pred eEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCcc-HHHHHHHHccCCcHHHHHHHHHHHHHHHHHH
Q 013210 238 DVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMN-PKVAFELSERIPHLGLRMKEHCHRALIFARR 316 (447)
Q Consensus 238 di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~-~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~ 316 (447)
|+++.|+||+++++| ||+++++++++.+..............+. ..++..++..+....+..++..++++++.+.
T Consensus 225 ~i~~~s~sK~~~~~g----G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~ 300 (385)
T TIGR01825 225 DIQVGTLSKAIGVVG----GYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAG 300 (385)
T ss_pred cEEEEeccHHhhcCC----CEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 899999999998654 89999999888886543211111111112 2222233332222223556677888999999
Q ss_pred HHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCcccccccccccc
Q 013210 317 MKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSST 396 (447)
Q Consensus 317 L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~ 396 (447)
|++.+.++..|. +.++.+.++.......+...|... | +.++.+.. +..
T Consensus 301 L~~~g~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~L~~~---g-i~v~~~~~------~~~-- 348 (385)
T TIGR01825 301 LGKLGYDTGGSE--------------------TPITPVVIGDEKAAQEFSRRLFDE---G-IFAQSIVF------PTV-- 348 (385)
T ss_pred HHHcCCCCCCCC--------------------CCEEEEEECCHHHHHHHHHHHHHC---C-cEEcccCC------CCC--
Confidence 988765543221 236667766443456777777652 3 33332211 100
Q ss_pred CCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 397 SSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 397 ~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
......||+++. ...+++.++.+.++|+++
T Consensus 349 ------------~~~~~~iRi~~~-~~~~~e~i~~~~~~l~~~ 378 (385)
T TIGR01825 349 ------------PRGTARIRNIPT-AEHTKDDLDQALDAYEKV 378 (385)
T ss_pred ------------CCCCceEEEEEc-CCCCHHHHHHHHHHHHHH
Confidence 012367999998 667777777777766655
No 173
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.94 E-value=1.3e-24 Score=215.26 Aligned_cols=236 Identities=17% Similarity=0.183 Sum_probs=168.2
Q ss_pred HHHHHHHHHHh----C-----CCeEEEeCChHHHHHHHHHHh-cCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 102 LNLSRQMAALE----G-----TEAAYCTASGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 102 ~~l~~~ia~l~----g-----~~~~~~tsggt~A~~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
.++++.+|+++ | .+.+++|+|+++++..++..+ +++||+|+++.|.|+.+...+. ..|.++..++
T Consensus 65 ~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~-----~~g~~~~~~~ 139 (364)
T PRK07865 65 PELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGAR-----LAGATVVRAD 139 (364)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHH-----hcCCEEEecC
Confidence 45677777765 3 246999999999999988777 7899999999999998877662 3678877764
Q ss_pred CCCHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----c-------CCC
Q 013210 172 ISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-----A-------RLG 236 (447)
Q Consensus 172 ~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-----~-------~~g 236 (447)
++++++ ..++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|..+.++. . ...
T Consensus 140 --~~~~l~----~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 213 (364)
T PRK07865 140 --SLTELG----PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHT 213 (364)
T ss_pred --ChhhCC----cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccc
Confidence 444332 357899999999999999987 5688889999999999999996544321 1 113
Q ss_pred CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH
Q 013210 237 ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARR 316 (447)
Q Consensus 237 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~ 316 (447)
..+++.|+||.+|.+|.|+ ||+++++++++.+...+.... ...+.+.+.++...+...+++....+.+.++++.+.+.
T Consensus 214 ~~i~~~S~SK~~~~~GlRi-G~i~~~~~~~~~~~~~~~~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 291 (364)
T PRK07865 214 GLLAVHSLSKQSNLAGYRA-GFVAGDPALVAELLEVRKHAG-MMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPA 291 (364)
T ss_pred eEEEEeechhccCCCceee-EEEecCHHHHHHHHHHHHhcC-CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5699999999999999998 999999999988876554111 12223333333333433334555566778889999999
Q ss_pred HHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 317 MKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 317 L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
|++.+..+..|. .|.++++.++.. ...+.+.|..
T Consensus 292 L~~~g~~~~~~~-------------------~~~~~~~~~~~~--~~~~~~~l~~ 325 (364)
T PRK07865 292 LEAAGFRVDHSE-------------------AGLYLWATRGED--CWDTVAWLAE 325 (364)
T ss_pred HHHcCCcccCCC-------------------ccEEEEEeCCCC--HHHHHHHHHH
Confidence 988765543332 344677776421 3445555654
No 174
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.94 E-value=8.4e-25 Score=216.63 Aligned_cols=242 Identities=20% Similarity=0.252 Sum_probs=180.0
Q ss_pred HHHHHHHHHHHhC--------CC-eEEEeCChHHHHHHHHHHh-cCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEe
Q 013210 101 VLNLSRQMAALEG--------TE-AAYCTASGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 170 (447)
Q Consensus 101 ~~~l~~~ia~l~g--------~~-~~~~tsggt~A~~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v 170 (447)
...+++.+|++++ .+ .+++++|..+++..++..+ ..+|+.|+++.|.|+.+...++ ..|.++..+
T Consensus 46 ~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~-----~~g~~~~~~ 120 (363)
T PF00155_consen 46 YPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAAR-----LLGAEVIPV 120 (363)
T ss_dssp HHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHHH-----HTTSEEEEE
T ss_pred hHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccccccccceecCCcccccccccc-----ccCceeeec
Confidence 5789999999998 56 6888888888888877777 6789999999999999998884 257777776
Q ss_pred C-------CCCHHHHHHhhccC-----CceEEEEEcCCCCCccccCHH---HHHHHHHhcCCEEEEeCCCCCCCCCcc--
Q 013210 171 D-------ISDHEMVNSAIVQG-----RTKVLYFESISNPTLAVANIP---ELSRLAHDKGVTVVVDNTFSPLVLSPA-- 233 (447)
Q Consensus 171 ~-------~~d~~~l~~~i~~~-----~t~lV~i~~~~NptG~v~~l~---~I~~la~~~gi~livD~~~~~~~~~~~-- 233 (447)
+ ..|+++|++.+++. ++++|++++|+||||.+.+.+ +|+++|++||+++|+|++|..+.+...
T Consensus 121 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 200 (363)
T PF00155_consen 121 PLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDF 200 (363)
T ss_dssp EEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHT
T ss_pred cccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCcc
Confidence 6 23899999988331 578999999999999998755 555559999999999999966554411
Q ss_pred -------CCC-CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCC----cHHH
Q 013210 234 -------RLG-ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP----HLGL 301 (447)
Q Consensus 234 -------~~g-~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~----~l~~ 301 (447)
+.+ ..+++.|+||.+|.+|.|+ ||++.++++++.++...... ..+...+..+...+.... ++.+
T Consensus 201 ~~~~~~~~~~~~vi~~~S~SK~~g~~GlRv-G~i~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~ 276 (363)
T PF00155_consen 201 GPIRSLLDEDDNVIVVGSLSKSFGLPGLRV-GYIVAPPELIERLRRFQRSG---LSSSPMQAAAAAALSDPELVEKWLEE 276 (363)
T ss_dssp HHHHGHHTTTSTEEEEEESTTTTTSGGGTE-EEEEEEHHHHHHHHHHHHHT---TSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Ccccccccccccceeeeecccccccccccc-ccccchhhhhhhhhhccccc---cccchhhHHHHHhhhccccccccccc
Confidence 112 3699999999999999999 99988999999888766521 223333333333333222 5566
Q ss_pred HHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 302 RMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 302 ~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
+.+++.++++++.+.|++.+..+..+. .|.++++.+... +...+.+.|..
T Consensus 277 ~~~~l~~~~~~l~~~L~~~~~~~~~~~-------------------~~~~~~~~~~~~-~~~~l~~~L~~ 326 (363)
T PF00155_consen 277 LRERLRENRDLLREALEEIGITVLPPE-------------------AGFFLWVRLDPN-DAEELAQELLE 326 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSEEEHHS-------------------BSSEEEEEESHH-HHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHhhhheeecc-------------------CccEEEEEcccc-hHHHHHHHHHH
Confidence 778889999999999998877666432 345777777644 45677777765
No 175
>PRK05839 hypothetical protein; Provisional
Probab=99.94 E-value=2.9e-24 Score=213.37 Aligned_cols=233 Identities=13% Similarity=0.088 Sum_probs=161.4
Q ss_pred HHHHHHHHHHh----C----CCeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 102 LNLSRQMAALE----G----TEAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 102 ~~l~~~ia~l~----g----~~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
.++++.+|+++ | .+++++|+|+++|+..++..++ ++||.|+++.|.|+.+...+. ..|+++..++
T Consensus 63 ~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~-----~~g~~v~~v~ 137 (374)
T PRK05839 63 ESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAI-----ASRAKVLLMP 137 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHH-----hcCCEEEEee
Confidence 35666665443 4 3569999999999999888764 478999999999999887763 3688888876
Q ss_pred CC-----CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC-----cc-----
Q 013210 172 IS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS-----PA----- 233 (447)
Q Consensus 172 ~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~-----~~----- 233 (447)
.+ +++..+..+ .++++|++++||||||.+.+ +++|+++|+++|+++|+||+|..+..+ ..
T Consensus 138 ~~~~~~~~~d~~~~~~--~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~ 215 (374)
T PRK05839 138 LTKENDFTPSLNEKEL--QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASIL 215 (374)
T ss_pred cccccCCcCCcchhhh--ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcc
Confidence 53 122222223 46899999999999999986 567788899999999999999654321 11
Q ss_pred ----CCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHH
Q 013210 234 ----RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHR 309 (447)
Q Consensus 234 ----~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~ 309 (447)
..+..+++.|+||.|+.+|.|+ ||+++++++++.+....... ....+...+.++...+...+++....+++.++
T Consensus 216 ~~~~~~~~vi~~~SfSK~~~~~GlRi-G~ii~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 293 (374)
T PRK05839 216 VGNESFKNVLVINSISKRSSAPGLRS-GFIAGDASILKKYKAYRTYL-GCASPLPLQKAAAVAWLDDEHAEFFRNIYAKN 293 (374)
T ss_pred cCccccCcEEEEeccccccCCcccee-EEEecCHHHHHHHHHHHhhc-CCCCChHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 1246799999999999999999 99999999988887664411 12223333444443443434455556667777
Q ss_pred HHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhh
Q 013210 310 ALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQ 370 (447)
Q Consensus 310 ~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~ 370 (447)
++.+.+.| +.. .| ..|.++|+.+++. ..+.+++.
T Consensus 294 ~~~~~~~l---~~~--~p-------------------~gg~fi~~~~~~~---~~~~~~l~ 327 (374)
T PRK05839 294 LKLAREIL---GIT--IP-------------------PATFYVWLPVDND---EEFTKKLY 327 (374)
T ss_pred HHHHHHhc---CCC--CC-------------------CeeEEEEEeCCCh---HHHHHHHH
Confidence 77766654 211 22 2467899998743 35555653
No 176
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.94 E-value=4.1e-24 Score=211.04 Aligned_cols=236 Identities=18% Similarity=0.161 Sum_probs=166.7
Q ss_pred HHHHHHHHHHh----C---C--CeEEEeCChHHHHHHHHHHh-cCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 102 LNLSRQMAALE----G---T--EAAYCTASGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 102 ~~l~~~ia~l~----g---~--~~~~~tsggt~A~~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
.++++.+++++ | . +++++|+|+++++..++..+ +++||.|+++.|+|+++...+. ..|.++..++
T Consensus 59 ~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~-----~~g~~~~~v~ 133 (357)
T TIGR03539 59 PELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGAL-----LAGATPVAAD 133 (357)
T ss_pred HHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHH-----hcCCEEeccC
Confidence 45666666665 3 2 56999999999999988877 7899999999999998876652 2577777664
Q ss_pred CCCHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----c-------CCC
Q 013210 172 ISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-----A-------RLG 236 (447)
Q Consensus 172 ~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-----~-------~~g 236 (447)
+++.+. .+++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..+.++. . ...
T Consensus 134 --~~~~l~----~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 207 (357)
T TIGR03539 134 --DPTELD----PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHT 207 (357)
T ss_pred --ChhhcC----ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccc
Confidence 444332 457899999999999999986 6678899999999999999995443221 1 113
Q ss_pred CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH
Q 013210 237 ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARR 316 (447)
Q Consensus 237 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~ 316 (447)
..+++.|+||.++.+|.|+ ||+++++++++.+...+... ....+.+.+.++..++....++....+++.++++.+.+.
T Consensus 208 ~vi~~~S~SK~~~~~G~R~-G~~i~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 285 (357)
T TIGR03539 208 GLLAVHSLSKRSNLAGYRA-GFVAGDPALVAELLTVRKHA-GLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPA 285 (357)
T ss_pred cEEEEeccccccCCCceeE-EEEecCHHHHHHHHHHHhhc-ccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4699999999999999998 99999999998887665421 122233333333333333233444556678888999999
Q ss_pred HHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 317 MKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 317 L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
|++.+..+..|. .|.++++.++. ....+.+.|..
T Consensus 286 L~~~g~~~~~p~-------------------~~~~~~~~~~~--~~~~~~~~l~~ 319 (357)
T TIGR03539 286 LEKAGFRIDHSE-------------------AGLYLWATRGE--DAWDTVDRLAE 319 (357)
T ss_pred HHHcCCCCcCCC-------------------ccEEEEEECCC--CHHHHHHHHHh
Confidence 988765443322 34477777753 23456666654
No 177
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.94 E-value=6.9e-24 Score=210.06 Aligned_cols=291 Identities=16% Similarity=0.148 Sum_probs=194.7
Q ss_pred CchHHHHHHHHHHHhCCC----eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC
Q 013210 98 NPTVLNLSRQMAALEGTE----AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~----~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~ 173 (447)
...++++++.+++++|++ .+++|+|||+|++.++.+++.+||++++..+.+.+.. +.....+ .|.+++.++.+
T Consensus 34 ~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~a~~-~g~~~~~v~~~ 110 (363)
T TIGR02326 34 NIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGAR--IVQIAEY-LGIPHHVVDTG 110 (363)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHH--HHHHHHH-cCCceEEEeCC
Confidence 346788999999999985 3889999999999999999888887666544443332 1122223 67777777654
Q ss_pred -----CHHHHHHhhcc-CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCC
Q 013210 174 -----DHEMVNSAIVQ-GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSIS 245 (447)
Q Consensus 174 -----d~~~l~~~i~~-~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~s 245 (447)
|++++++++.. +++++|.+.++.||||.+.|+++|.++|+++|+++++|++| +..+++..++++|+++.|+|
T Consensus 111 ~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~ 190 (363)
T TIGR02326 111 EVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSAN 190 (363)
T ss_pred CCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCc
Confidence 78999998832 35678899999999999999999999999999999999988 44455666778999999999
Q ss_pred cccc-CCCCeeEEEEEcChHHHHHHHHHhh-----------------hhhhhcCCCccHHHHHHHHccC---CcHHHHHH
Q 013210 246 KFIS-GGADIIAGAVCGPANLVNSMMDLHQ-----------------GALMLLGPTMNPKVAFELSERI---PHLGLRMK 304 (447)
Q Consensus 246 K~~g-~~g~~igG~l~~~~~~~~~l~~~~~-----------------~~~~~~g~~~~~~~a~~~~~~~---~~l~~~~~ 304 (447)
|+++ ++| + |+++.+++.++.+..... +...+..+.....+...++..+ ..+..+.+
T Consensus 191 K~l~~p~G--~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~ 267 (363)
T TIGR02326 191 KCIQGVPG--F-GFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQ 267 (363)
T ss_pred cccccCCc--c-eEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHH
Confidence 9884 556 4 999998887765432100 0000111111111111122211 12455778
Q ss_pred HHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhcccccccccccc
Q 013210 305 EHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQNYAQFGFMAVSL 382 (447)
Q Consensus 305 ~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~l~~~l~~~~~~g~~~vs~ 382 (447)
++.++++++.+.|+++++.+..+.... .+.+++|.++.. .....+.+.|... | +.++.
T Consensus 268 ~~~~~~~~l~~~L~~~g~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~v~~~L~~~---g-i~v~~ 327 (363)
T TIGR02326 268 RYQQNQKTLVAGMRALGFEPLLDDEIQ----------------SPIITSFYSPEDPDYRFADFYQRLKEQ---G-FVIYP 327 (363)
T ss_pred HHHHHHHHHHHHHHHcCCeeccCcccC----------------CceEEEEECCCCCCCCHHHHHHHHHHC---C-EEEEC
Confidence 889999999999998877654332111 223677887642 2345677777653 3 45554
Q ss_pred cCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 383 GYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 383 G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
|.. ...+.+|||+. ...+.+.++.+.++|+++
T Consensus 328 g~~------------------------~~~~~iRi~~~-~~~~~edv~~~l~~l~~~ 359 (363)
T TIGR02326 328 GKV------------------------SQVDCFRIGNI-GEVDAADITRLLTAIGKA 359 (363)
T ss_pred CcC------------------------CCCCEEEEecC-CCCCHHHHHHHHHHHHHH
Confidence 411 01367999963 345666677777776654
No 178
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=1.5e-24 Score=220.03 Aligned_cols=337 Identities=15% Similarity=0.131 Sum_probs=219.7
Q ss_pred ccccccccccccCCH-HHHHHhhcCCC--CCCCCCccccCCCCchHHH-HHHHHHHHhCCCe--EEEe---CChHHHHHH
Q 013210 59 NMSIEASATFTVMEP-ETMRRMFAGEL--GPDRDFFIYSRHFNPTVLN-LSRQMAALEGTEA--AYCT---ASGMSAISS 129 (447)
Q Consensus 59 ~~pi~~att~~~~~~-~~~~~~~~~~~--~~~~~~~~~~r~~~~~~~~-l~~~ia~l~g~~~--~~~t---sggt~A~~~ 129 (447)
.-++..|.+++.|.+ +.+...+...| |||++.|..|......+++ +++++++++|++. +.++ +||++||.+
T Consensus 36 ~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~ 115 (452)
T PTZ00094 36 GLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFA 115 (452)
T ss_pred CeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHH
Confidence 446788899998887 88888898888 9999999999887777774 8899999999854 4466 899999999
Q ss_pred HHHHhcCCCCeEEEeCCCchhHHHHHHhhcCc-----ccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCC
Q 013210 130 VLMQLCSSGGHVVAARTLYGGTHALLTHFFPR-----ACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPT 199 (447)
Q Consensus 130 al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~-----~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~Npt 199 (447)
++.+++++||+|+++..+|+++...+...... ..++++..++.+ |+++|+++++..++++|++. ++.+
T Consensus 116 v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~--~s~~ 193 (452)
T PTZ00094 116 VYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG--ASAY 193 (452)
T ss_pred HHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--CCCC
Confidence 99999999999999999998876544211000 012334444433 89999999844467777763 4569
Q ss_pred ccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCC----ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHh
Q 013210 200 LAVANIPELSRLAHDKGVTVVVDNTF--SPLVLS----PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH 273 (447)
Q Consensus 200 G~v~~l~~I~~la~~~gi~livD~~~--~~~~~~----~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~ 273 (447)
|.++|+++|.++|+++|+++++|++| +.+..+ +. .++|++++|+||+++||. ||+++.++++.+.+....
T Consensus 194 g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~-~~~D~l~~S~hK~l~GP~---Gg~l~~~~~~~~~l~~~~ 269 (452)
T PTZ00094 194 PRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPF-PYADVVTTTTHKSLRGPR---SGLIFYRKKVKPDIENKI 269 (452)
T ss_pred CCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCC-CCCcEEEcCCccCCCCCC---ceEEEEecccchHHHHhh
Confidence 99999999999999999999999999 333332 22 279999999999886553 466666655544332211
Q ss_pred hhhh--hhcCC-CccHHHHHH-HHccC--CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCC
Q 013210 274 QGAL--MLLGP-TMNPKVAFE-LSERI--PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYG 347 (447)
Q Consensus 274 ~~~~--~~~g~-~~~~~~a~~-~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g 347 (447)
.... ...|+ .....++.. ++..+ .......++..+++++|.+.|++.+.++..++... +
T Consensus 270 ~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~~~-~-------------- 334 (452)
T PTZ00094 270 NEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGTDN-H-------------- 334 (452)
T ss_pred ccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCCC-c--------------
Confidence 1000 01122 222222221 22222 22345667788999999999988777776543111 1
Q ss_pred cCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCH--
Q 013210 348 FGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTL-- 425 (447)
Q Consensus 348 ~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~-- 425 (447)
-.++.|...+.. ...+...|.. .| |.++.-+. | |.. ....++.||+|++ ..++
T Consensus 335 -~~~v~~~~~~~~-~~~~~~~L~~---~g-I~vs~~~~------p-~~~-----------~~~~~~~vRis~~-~~tt~g 389 (452)
T PTZ00094 335 -LVLVDLRPFGIT-GSKMEKLLDA---VN-ISVNKNTI------P-GDK-----------SALNPSGVRLGTP-ALTTRG 389 (452)
T ss_pred -eEeecCCcCCCC-HHHHHHHHHH---CC-cEEecccC------C-CCC-----------cCCCCCeEEECCH-HHHhCC
Confidence 114444443322 3455555554 23 45442110 1 100 0122478999998 6665
Q ss_pred --HHHHHHHHHHHHHhhh
Q 013210 426 --DQRWSQFEKALSRMQD 441 (447)
Q Consensus 426 --~~~i~~l~~al~~~~~ 441 (447)
+++++.+.++|.++..
T Consensus 390 ~~~~di~~l~~~l~~~~~ 407 (452)
T PTZ00094 390 AKEKDFKFVADFLDRAVK 407 (452)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 7888888888876644
No 179
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.93 E-value=1.5e-24 Score=217.86 Aligned_cols=318 Identities=13% Similarity=0.084 Sum_probs=201.1
Q ss_pred cccccccCCH-HHHHHhhcCCCCCCC-CCccccCCCC-chHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhcCCC
Q 013210 64 ASATFTVMEP-ETMRRMFAGELGPDR-DFFIYSRHFN-PTVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLCSSG 138 (447)
Q Consensus 64 ~att~~~~~~-~~~~~~~~~~~~~~~-~~~~~~r~~~-~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~~~g 138 (447)
+++++..+.+ +.+.+++. .++++. ..+..++... ...+.+ +++ +++|++ .++||+|+|++++.++.++++++
T Consensus 34 ~a~g~~p~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~ 110 (406)
T TIGR01814 34 NSLGLMPKAARNALKEELD-KWAKIAIRGHNTGKAPWFTLDESL-LKL-RLVGAKEDEVVVMNTLTINLHLLLASFYKPT 110 (406)
T ss_pred CCcCcCcHHHHHHHHHHHH-HHHHhhhccCccCCCChhhhhhhh-ccc-cccCCCCCcEEEeCCchHHHHHHHHHhcCCc
Confidence 4455552334 44444443 344333 2444433222 222333 345 788874 59999999999999999886654
Q ss_pred ---CeEEEeCCCchhHHHHHHhhcCcccCeeE----EEeCCC-----CHHHHHHhhc--cCCceEEEEEcCCCCCccccC
Q 013210 139 ---GHVVAARTLYGGTHALLTHFFPRACNITT----TFVDIS-----DHEMVNSAIV--QGRTKVLYFESISNPTLAVAN 204 (447)
Q Consensus 139 ---d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~----~~v~~~-----d~~~l~~~i~--~~~t~lV~i~~~~NptG~v~~ 204 (447)
+.|+++..+|++....+.....+ .|+++ ..++.+ |++++++.++ +++|++|++++++|++|.++|
T Consensus 111 ~~~~~i~~~~~~~~s~~~~~~~~~~~-~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~ 189 (406)
T TIGR01814 111 PKRYKILLEAKAFPSDHYAIESQLQL-HGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFD 189 (406)
T ss_pred CCccEEEecCCCCChHHHHHHHHHHh-cCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceecC
Confidence 36888889999977666433333 57665 344432 7788887763 368999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCcccc-CCCCeeEEEEEcChHHHHHHHHHhhhh-----
Q 013210 205 IPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFIS-GGADIIAGAVCGPANLVNSMMDLHQGA----- 276 (447)
Q Consensus 205 l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g-~~g~~igG~l~~~~~~~~~l~~~~~~~----- 276 (447)
+++|.++|+++|+++++|++| +.++++..++++|+++.|+||+++ ++| ||+++.++.. ..+.....++
T Consensus 190 ~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~pG---~~l~v~~~~~-~~~~p~~~g~~~~~~ 265 (406)
T TIGR01814 190 MAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAGPG---AGAFVHEKHA-HTERPRLAGWWGHAR 265 (406)
T ss_pred HHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEcCccccCCCCC---eEEEEehhhh-hhcCCCCCcccCCCC
Confidence 999999999999999999999 556677777899999999999985 554 2544444332 2221110000
Q ss_pred ---------------hhhcCCCccHHH--H-HHHHccC--CcHHHHHHHHHHHHHHHHHHHHhC-C----CeeeCCCCCC
Q 013210 277 ---------------LMLLGPTMNPKV--A-FELSERI--PHLGLRMKEHCHRALIFARRMKKL-G----LKVLYPGLED 331 (447)
Q Consensus 277 ---------------~~~~g~~~~~~~--a-~~~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~-~----~~v~~p~~~~ 331 (447)
....| +++... + ..++..+ ..+....++..++.+++.+.|++. + .++..|.-
T Consensus 266 ~~~~~~~~~~~~~~~~~~~G-T~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~-- 342 (406)
T TIGR01814 266 PTRFKMDNTLGLIPCGFRIS-NPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRD-- 342 (406)
T ss_pred ccccccccccCCCccceeeC-CccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCC--
Confidence 00112 222211 1 1122211 123455566788888888888764 2 45554421
Q ss_pred CchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCC
Q 013210 332 HPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGIS 411 (447)
Q Consensus 332 ~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~ 411 (447)
+. ..+++++|.++ . ....+.+.|... | +.++.. .
T Consensus 343 -~~------------~r~~~v~~~~~-~-~~~~~~~~L~~~---g-i~v~~~---------------------------~ 376 (406)
T TIGR01814 343 -HA------------QRGCQLSLTHP-V-PGKAVFQALIKR---G-VIGDKR---------------------------E 376 (406)
T ss_pred -hh------------hcCCeEEEEec-C-CHHHHHHHHHHC---C-EEEecc---------------------------C
Confidence 10 13568899887 2 245666677642 3 232110 1
Q ss_pred CCeEEEEe-CCCCCHHHHHHHHHHHHHHh
Q 013210 412 AGLVRMSV-GYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 412 ~~~iRiS~-g~~~~~~~~i~~l~~al~~~ 439 (447)
++.||+|+ + ..+++++|+.+.++|+++
T Consensus 377 ~~~iRiS~~~-~~nt~~did~l~~~l~~~ 404 (406)
T TIGR01814 377 PSVIRVAPVP-LYNTFVDVYDAVNVLEEI 404 (406)
T ss_pred CCeEEEechh-ccCCHHHHHHHHHHHHHH
Confidence 35899999 7 689999999999998765
No 180
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.93 E-value=9.2e-24 Score=209.44 Aligned_cols=307 Identities=13% Similarity=0.095 Sum_probs=194.9
Q ss_pred ccccCCH-HHHHHhhcCCCCCCCC-CccccCC----CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCe
Q 013210 67 TFTVMEP-ETMRRMFAGELGPDRD-FFIYSRH----FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGH 140 (447)
Q Consensus 67 t~~~~~~-~~~~~~~~~~~~~~~~-~~~~~r~----~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~ 140 (447)
+++.+.+ +.+.++.... |++ .|..|.. ..+..+++|+++|+++|++.++++++|+.|+..++..+.++||.
T Consensus 21 ~~~~~~~~~~~~~~~~~~---p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~l~~~sG~~a~~~~~~~~~~~~d~ 97 (370)
T PRK05937 21 DTLVHEVEKRYRLYCRQF---PHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPSGYMANLGLCAHLSSVTDY 97 (370)
T ss_pred HHHHHHHHHHHHHhcccc---CCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeEEEECChHHHHHHHHHHhCCCCCE
Confidence 3333333 4554443332 554 6666666 77889999999999999998888999999987766666677888
Q ss_pred EEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhcc-----CCceEEEEEcCCCCCccccCHHHHHHHHHhc
Q 013210 141 VVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQ-----GRTKVLYFESISNPTLAVANIPELSRLAHDK 215 (447)
Q Consensus 141 Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-----~~t~lV~i~~~~NptG~v~~l~~I~~la~~~ 215 (447)
|++...+|.++...+.. . .+..+. ++..|+++|++.++. +++.+|++++++|++|.++|+++|.++|+++
T Consensus 98 ii~d~~~H~sv~~~~~~-~---~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~ 172 (370)
T PRK05937 98 VLWDEQVHISVVYSLSV-I---SGWHQS-FRHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKY 172 (370)
T ss_pred EEEEhhhhHHHHHHHHH-c---CCceEE-ecCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHc
Confidence 88889999888887742 2 243444 356789999998832 3467888999999999999999999999999
Q ss_pred CCEEEEeCCCC--CCCCCcc----CCC---CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccH
Q 013210 216 GVTVVVDNTFS--PLVLSPA----RLG---ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNP 286 (447)
Q Consensus 216 gi~livD~~~~--~~~~~~~----~~g---~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~ 286 (447)
|+++|+|++|+ .+..+.. .++ .++++.|+||.+|++|. |++ ..++....+...........+.++..
T Consensus 173 ~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~---~vl-~~~~~~~~~~~~~~~~~~s~~~~~~~ 248 (370)
T PRK05937 173 HAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMGA---ALL-SSSEVKQDLMLNSPPLRYSTGLPPHL 248 (370)
T ss_pred CCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCce---EEE-cCHHHHHHHHHhCCCCeecCCCCHHH
Confidence 99999999994 2433321 222 34678899999998762 444 44555554442221111122222222
Q ss_pred HHHH-HHHccCCc-HHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHH
Q 013210 287 KVAF-ELSERIPH-LGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANR 364 (447)
Q Consensus 287 ~~a~-~~~~~~~~-l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~ 364 (447)
..+. .++..+.. -....++..++++++.+.|...+ + +.+..|.+++.. ...
T Consensus 249 ~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~~-----~---------------------~~~~~i~~~~~~-~~~ 301 (370)
T PRK05937 249 LISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSAA-----P---------------------GCVQPIFLPGIS-EQE 301 (370)
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCCC-----C---------------------CCEEEEEeCChh-HHH
Confidence 2211 11211111 12233455666666665553210 1 113445666443 456
Q ss_pred HHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013210 365 LMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 365 l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 441 (447)
+.+.|... | +.++.. +.| ..+.||+|++ ..+++++++.+.++|+++.+
T Consensus 302 ~~~~L~~~---g-i~v~~~------~~~------------------~~~~iRis~~-~~~t~edid~l~~~L~~~~~ 349 (370)
T PRK05937 302 LYSKLVET---G-IRVGVV------CFP------------------TGPFLRVNLH-AFNTEDEVDILVSVLATYLE 349 (370)
T ss_pred HHHHHHHC---C-eeEEee------CCC------------------CCCEEEEEcC-CCCCHHHHHHHHHHHHHHHH
Confidence 77777652 3 333311 111 1357999999 99999999999999987653
No 181
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.93 E-value=2e-23 Score=209.35 Aligned_cols=288 Identities=14% Similarity=0.152 Sum_probs=198.9
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHH
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEM 177 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 177 (447)
.+..+++++.+++++|.+..+++++|++++..++++++++||+|+++++.|+++...+. ..|.++..++..|+++
T Consensus 86 ~~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~d~~~ 160 (397)
T PRK06939 86 QDLHKELEEKLAKFLGTEDAILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGVR-----LCKAKRYRYANNDMAD 160 (397)
T ss_pred cHHHHHHHHHHHHHhCCCcEEEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHH-----hcCCceEEeCCCCHHH
Confidence 45678899999999998776666667999999999999999999999999999877662 2466666777678999
Q ss_pred HHHhhcc---C--CceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCC-CC-CCC------ccCC--CCeEEEe
Q 013210 178 VNSAIVQ---G--RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PL-VLS------PARL--GADVVVH 242 (447)
Q Consensus 178 l~~~i~~---~--~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~-~~~------~~~~--g~di~~~ 242 (447)
+++.++. + ++++|++++++|++|.+.++++|.++|++||+++|+|++|. ++ ... ...+ ++|+++.
T Consensus 161 l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~ 240 (397)
T PRK06939 161 LEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITG 240 (397)
T ss_pred HHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEE
Confidence 9888732 3 78899988899999999999999999999999999999993 32 111 0112 5789999
Q ss_pred CCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHH--H-HHHHHccCCcHHHHHHHHHHHHHHHHHHHHh
Q 013210 243 SISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPK--V-AFELSERIPHLGLRMKEHCHRALIFARRMKK 319 (447)
Q Consensus 243 S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~--~-a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 319 (447)
|+||++++ .++ ||+++++++++.+....... ..+++..+. . +..++..+.......+++.++++++.+.|++
T Consensus 241 S~sK~~~g--~r~-G~v~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~ 315 (397)
T PRK06939 241 TLGKALGG--ASG-GYTAGRKEVIDWLRQRSRPY--LFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTA 315 (397)
T ss_pred ECHHHhCc--cCc-eEEEeCHHHHHHHHHhCccc--cccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999963 364 99999999988887543211 122222222 2 1122222222245567788999999999988
Q ss_pred CCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCC
Q 013210 320 LGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSE 399 (447)
Q Consensus 320 ~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~ 399 (447)
.+..+..| .++++.+.++.......|.+.|... | +.+..+.+ +..
T Consensus 316 ~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~L~~~---g-I~v~~~~~------~~~----- 360 (397)
T PRK06939 316 AGFTLGPG--------------------EHPIIPVMLGDAKLAQEFADRLLEE---G-VYVIGFSF------PVV----- 360 (397)
T ss_pred cCCCcCCC--------------------CCCEEEEEECCHHHHHHHHHHHHHC---C-ceEeeeCC------CCC-----
Confidence 76543211 2346666666544467788887753 3 34432110 100
Q ss_pred CCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 400 LNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 400 ~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
+-..+.||++++ ...+++.++.+.+.|+++.
T Consensus 361 ---------~~~~~~iRi~~~-~~~~~~~i~~~l~~L~~~~ 391 (397)
T PRK06939 361 ---------PKGQARIRTQMS-AAHTKEQLDRAIDAFEKVG 391 (397)
T ss_pred ---------CCCCceEEEEEC-CCCCHHHHHHHHHHHHHHH
Confidence 112367999998 6566676777777666553
No 182
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.93 E-value=1.5e-23 Score=208.15 Aligned_cols=292 Identities=13% Similarity=0.147 Sum_probs=199.2
Q ss_pred chHHHHHHHHHHHhCCCe----EEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-
Q 013210 99 PTVLNLSRQMAALEGTEA----AYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS- 173 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~~----~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~- 173 (447)
...+++++.+++++|+++ +++|+||+++++.++.++..+||+|++..+.|.+.. +.....+ .|+++..++.+
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~~~~-~g~~~~~i~~~~ 113 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGAR--IAQIAEY-LGIAHVVLDTGE 113 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHH--HHHHHHH-cCCcEEEEECCC
Confidence 367899999999999742 779999999999999999989999998877766553 1122223 67787777653
Q ss_pred ----CHHHHHHhhcc-CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCc
Q 013210 174 ----DHEMVNSAIVQ-GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISK 246 (447)
Q Consensus 174 ----d~~~l~~~i~~-~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK 246 (447)
|++++++++.. +++++|++++++||||.+.|+++|.++|+++|+++|+|+++ +....+...+++|+++.|++|
T Consensus 114 ~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K 193 (368)
T PRK13479 114 DEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANK 193 (368)
T ss_pred CCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCcc
Confidence 78999998832 35678999999999999999999999999999999999877 333455556689999999999
Q ss_pred cc-cCCCCeeEEEEEcChHHHHHHHHHhhh---------------hhhhcCCCccH-HHHHHHHc---cCCcHHHHHHHH
Q 013210 247 FI-SGGADIIAGAVCGPANLVNSMMDLHQG---------------ALMLLGPTMNP-KVAFELSE---RIPHLGLRMKEH 306 (447)
Q Consensus 247 ~~-g~~g~~igG~l~~~~~~~~~l~~~~~~---------------~~~~~g~~~~~-~~a~~~~~---~~~~l~~~~~~~ 306 (447)
++ |++| + |+++.++++++.+...... .....+.+... .....++. ....+..+.+++
T Consensus 194 ~l~g~~G--~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~ 270 (368)
T PRK13479 194 CIEGVPG--F-GFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARY 270 (368)
T ss_pred ccccCCC--c-eEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHH
Confidence 76 5666 4 9999999888776532110 00001111111 11111221 112355667888
Q ss_pred HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhcccccccccccccC
Q 013210 307 CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQNYAQFGFMAVSLGY 384 (447)
Q Consensus 307 ~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~l~~~l~~~~~~g~~~vs~G~ 384 (447)
.++++++.+.|+++++++..+.... .+.+++|.++.. .+...+.+.|...+ +.++.|.
T Consensus 271 ~~~~~~l~~~L~~~g~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~l~~~L~~~g----i~v~~g~ 330 (368)
T PRK13479 271 ANNQRTLVAGMRALGFEPLLDAEIQ----------------SPIIVTFHAPADPAYDFKEFYERLKEQG----FVIYPGK 330 (368)
T ss_pred HHHHHHHHHHHHHcCCcccCCchhc----------------CceEEEEECCCCCCcCHHHHHHHHHHCC----EEEecCC
Confidence 9999999999999877554332111 123677776532 23467777777533 4444331
Q ss_pred ccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013210 385 YETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 385 ~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 441 (447)
. ...+.+|+|.. ..++.+.++.+.++|+++.+
T Consensus 331 ~------------------------~~~~~iRis~~-~~~t~edi~~~l~~L~~~l~ 362 (368)
T PRK13479 331 L------------------------TQVDTFRIGCI-GDVDAADIRRLVAAIAEALY 362 (368)
T ss_pred C------------------------CCCCEEEEecC-CCCCHHHHHHHHHHHHHHHH
Confidence 0 01357999963 34667777777777776543
No 183
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.93 E-value=5.6e-24 Score=212.99 Aligned_cols=295 Identities=14% Similarity=0.118 Sum_probs=202.8
Q ss_pred CCchHHHHHHHHHHHhCCC---eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC
Q 013210 97 FNPTVLNLSRQMAALEGTE---AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 173 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~---~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~ 173 (447)
....++++++.+++++|++ .++++++|+++++.++..++++||+|+++++.|.+... .....+ .|.+++.++.+
T Consensus 40 ~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~--~~~~~~-~g~~v~~v~~~ 116 (401)
T PLN02409 40 FPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLW--IDQMQR-LNFDVDVVESP 116 (401)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHH--HHHHHH-cCCceEEEECC
Confidence 3456788999999999874 37999999999999999899999999999998876542 123333 68888877653
Q ss_pred -----CHHHHHHhhcc---CCceEEEEEcCCCCCccccCHHHHHHH--HHhcCCEEEEeCCC--CCCCCCccCCCCeEEE
Q 013210 174 -----DHEMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRL--AHDKGVTVVVDNTF--SPLVLSPARLGADVVV 241 (447)
Q Consensus 174 -----d~~~l~~~i~~---~~t~lV~i~~~~NptG~v~~l~~I~~l--a~~~gi~livD~~~--~~~~~~~~~~g~di~~ 241 (447)
|+++|++++.. +++++|++.++.|+||.+.|+++|.++ |+++|+++++|+++ +...++..++++|+++
T Consensus 117 ~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~ 196 (401)
T PLN02409 117 WGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVAL 196 (401)
T ss_pred CCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEE
Confidence 78999999933 379999999999999999999999999 99999999999998 4455666778999999
Q ss_pred eCCCccccCCCCeeEEEEEcChHHHHHHHHHhhh--------------hhhhcCCCccH--H-HHHHHHccC--CcHHHH
Q 013210 242 HSISKFISGGADIIAGAVCGPANLVNSMMDLHQG--------------ALMLLGPTMNP--K-VAFELSERI--PHLGLR 302 (447)
Q Consensus 242 ~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~--------------~~~~~g~~~~~--~-~a~~~~~~~--~~l~~~ 302 (447)
.|.||++++|.. + |+++.+++.++++...... .......+++. . +...++..+ ..+...
T Consensus 197 ~s~~K~l~~P~G-~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i 274 (401)
T PLN02409 197 TGSQKALSLPTG-L-GIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENV 274 (401)
T ss_pred EcCccccCcCCC-c-ceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHH
Confidence 999999976442 5 9999998888776532110 00000112221 1 111122211 124456
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccc
Q 013210 303 MKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSL 382 (447)
Q Consensus 303 ~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~ 382 (447)
.+++.++++++.+.|++.+.++..|. +.. ..+.+++|.++...+...+...|.. .+| +.+..
T Consensus 275 ~~~~~~l~~~l~~~L~~~g~~~~~~~-~~~--------------~s~~v~~~~~p~~~~~~~l~~~l~~--~~~-i~i~~ 336 (401)
T PLN02409 275 IARHARLGEATRLAVEAWGLKLCTKK-PEW--------------RSDTVTAVVVPEGIDSAEIVKNAWK--KYN-LSLGL 336 (401)
T ss_pred HHHHHHHHHHHHHHHHHcCCeeccCC-hhh--------------cccceEEEeCCCCCCHHHHHHHHHH--hCC-EEEEc
Confidence 67788999999999988877665432 010 1234778887633234556655543 234 34444
Q ss_pred cCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 383 GYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 383 G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
|.. ......+|||.- -+++.+.+..+..+|+.
T Consensus 337 G~~-----------------------~~~~~~~Rig~~-g~~~~~~~~~~~~~~~~ 368 (401)
T PLN02409 337 GLN-----------------------KVAGKVFRIGHL-GNVNELQLLGALAGVEM 368 (401)
T ss_pred CCC-----------------------cccCCEEEEcCC-CCCCHHHHHHHHHHHHH
Confidence 411 012468999987 66666666666666654
No 184
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.93 E-value=2e-23 Score=207.55 Aligned_cols=311 Identities=12% Similarity=0.135 Sum_probs=208.1
Q ss_pred cccccccCCH-HHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhc-----
Q 013210 64 ASATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLC----- 135 (447)
Q Consensus 64 ~att~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~----- 135 (447)
...+.+.+.+ +.+..+++...++++ .|. ......+++++.+|+++|++ .+++++||++++..++.++.
T Consensus 27 ~~~~~~~~~~~~a~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 102 (373)
T TIGR03812 27 SMCTNPHPIAVKAYDMFIETNLGDPG---LFP-GTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLARE 102 (373)
T ss_pred EEeCCchHHHHHHHHHHhhcCCCCcc---cCc-cHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhc
Confidence 3334444553 566666555555543 122 22355588999999999985 47889999999988876653
Q ss_pred -CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHH
Q 013210 136 -SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELS 209 (447)
Q Consensus 136 -~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~ 209 (447)
.+||+|+++.++|.++...+. ..|+++..++.+ |++++++++ ++++..+++..++||+|.+.|+++|.
T Consensus 103 ~~~g~~vl~~~~~h~~~~~~~~-----~~G~~~~~v~~~~~~~~d~~~l~~~l-~~~~~~vv~~~~~~~tG~~~~~~~i~ 176 (373)
T TIGR03812 103 EKRTPNIIVPESAHFSFEKAAE-----MLGLELRYAPLDEDYTVDVKDVEDLI-DDNTIGIVGIAGTTELGQIDDIEELS 176 (373)
T ss_pred cCCCcEEEECCcchHHHHHHHH-----HcCCeEEEEeeCCCCCcCHHHHHHHH-hhCcEEEEEECCCCCCCccCCHHHHH
Confidence 357899999999998776652 268888877653 899999998 66665445445799999999999999
Q ss_pred HHHHhcCCEEEEeCCCCCCC------------CCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhh
Q 013210 210 RLAHDKGVTVVVDNTFSPLV------------LSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL 277 (447)
Q Consensus 210 ~la~~~gi~livD~~~~~~~------------~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~ 277 (447)
++|+++|+++|+|++|+.+. .+....++|.++.|.||+.. .+.+.||+++.++++++.+..... +.
T Consensus 177 ~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~-~~~~~G~~~~~~~~~~~~l~~~~~-~~ 254 (373)
T TIGR03812 177 KIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGL-SPIPAGGILFRSKSYLKYLSVDAP-YL 254 (373)
T ss_pred HHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCC-CcCCceEEEEeCHHHHhhhcccCc-cc
Confidence 99999999999999995331 11112378999999999644 333465677778888776642111 10
Q ss_pred hh------cCCC--ccHHHHHHHHccC--CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCC
Q 013210 278 ML------LGPT--MNPKVAFELSERI--PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYG 347 (447)
Q Consensus 278 ~~------~g~~--~~~~~a~~~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g 347 (447)
.. .|+. .....+...+..+ +.+....++..++++++.+.|++++.....+.
T Consensus 255 ~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~------------------- 315 (373)
T TIGR03812 255 TVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIEP------------------- 315 (373)
T ss_pred CCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCC-------------------
Confidence 00 0111 1122222333322 23455678889999999999998876433321
Q ss_pred cCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHH
Q 013210 348 FGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQ 427 (447)
Q Consensus 348 ~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~ 427 (447)
...++.|.+++. ..+.+.|... | +.++.+ ..+..||+|++ ..++++
T Consensus 316 ~~~~v~~~~~~~---~~v~~~L~~~---g-i~v~~~--------------------------~~~~~iRis~~-~~~t~e 361 (373)
T TIGR03812 316 VLNIVAFEVDDP---EEVRKKLRDR---G-WYVSVT--------------------------RCPKALRIVVM-PHVTRE 361 (373)
T ss_pred CceEEEEEeCCH---HHHHHHHHHC---C-ceeccC--------------------------CCCCEEEEEEE-CCCCHH
Confidence 123778887753 3566666652 3 333321 01467999999 889999
Q ss_pred HHHHHHHHHHHh
Q 013210 428 RWSQFEKALSRM 439 (447)
Q Consensus 428 ~i~~l~~al~~~ 439 (447)
+++.+.++|+++
T Consensus 362 did~l~~~L~~~ 373 (373)
T TIGR03812 362 HIEEFLEDLKEI 373 (373)
T ss_pred HHHHHHHHHhhC
Confidence 999999998764
No 185
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.93 E-value=2.7e-23 Score=206.52 Aligned_cols=286 Identities=16% Similarity=0.164 Sum_probs=207.5
Q ss_pred chHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhc--------------CCCCeEEEeCCCchhHHHHHHhhcCcccC
Q 013210 99 PTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLC--------------SSGGHVVAARTLYGGTHALLTHFFPRACN 164 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~--------------~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g 164 (447)
...++||++||+++|.+.+++++||..||..++.++. .+++.|+.....|.+....++ +..+..+
T Consensus 147 ~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~-ls~~~~~ 225 (476)
T PLN02955 147 TYHRLLESSLADLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVR-LAERQGN 225 (476)
T ss_pred HHHHHHHHHHHHHHCCCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHH-hccccCC
Confidence 4567899999999999999999999999999998872 345678888888888887773 2222125
Q ss_pred eeEEEeCCCCHHHHHHhhcc--CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCc----------
Q 013210 165 ITTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSP---------- 232 (447)
Q Consensus 165 ~~~~~v~~~d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~---------- 232 (447)
.++..++.+|+++|++.++. .+.++|+++.+.++.|.+.|+++|.++|++||+++|+||+|+.+.+.+
T Consensus 226 a~~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g 305 (476)
T PLN02955 226 VEVFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFN 305 (476)
T ss_pred ceEEEeCCCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhC
Confidence 77888889999999988842 346788999999999999999999999999999999999995433221
Q ss_pred cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHH---HccCCcHHHHHHHHHHH
Q 013210 233 ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFEL---SERIPHLGLRMKEHCHR 309 (447)
Q Consensus 233 ~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~---~~~~~~l~~~~~~~~~~ 309 (447)
..-.+|+++.|++|.+|..| |++++++++++.++...... .+++.+++..+... +..+.....+.++++++
T Consensus 306 ~~~di~ii~~TLsKA~G~~G----Gfi~gs~~~~~~l~~~~~~~--ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n 379 (476)
T PLN02955 306 CEADVDLCVGTLSKAAGCHG----GFIACSKKWKQLIQSRGRSF--IFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWER 379 (476)
T ss_pred CCCCCcEEEEeCccchhccC----ceeecHHHHHHHHHHhCCCC--eecccccHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 11257899999999999654 99999999988887655533 23333333222222 22222223456677777
Q ss_pred HHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccc
Q 013210 310 ALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLM 389 (447)
Q Consensus 310 ~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~ 389 (447)
.+++.+. .++.+ . .+++.+.+.+...+..+.+.|... | +.++ .+
T Consensus 380 ~~~fr~~---~G~~~------~-----------------sPI~pI~ig~~~~a~~~~~~L~~~---G-i~v~------~i 423 (476)
T PLN02955 380 VKEFKAL---SGVDI------S-----------------SPIISLVVGNQEKALKASRYLLKS---G-FHVM------AI 423 (476)
T ss_pred HHHHHHh---cCCCC------C-----------------CCEEEEEeCCHHHHHHHHHHHHHC---C-CEEE------EE
Confidence 7777663 23321 1 239999999888788888888863 3 2322 23
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhc
Q 013210 390 SCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDS 442 (447)
Q Consensus 390 ~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~ 442 (447)
.+|++.. ....+||++. ..+++++|+.+.++|.++.+.
T Consensus 424 ~yPtVP~--------------g~~rLRi~ls-A~Ht~edId~lv~~L~~~~~~ 461 (476)
T PLN02955 424 RPPTVPP--------------NSCRLRVTLS-AAHTTEDVKKLITALSSCLDF 461 (476)
T ss_pred CCCCCCC--------------CCceEEEeeC-CCCCHHHHHHHHHHHHHHHhh
Confidence 3455431 2357999999 999999999999999887544
No 186
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.93 E-value=8.3e-24 Score=207.41 Aligned_cols=286 Identities=19% Similarity=0.108 Sum_probs=192.9
Q ss_pred CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC---
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 173 (447)
..+..+++++.+++++|.+.+++++||++|+.+++.+++++||.|+++.+.|.+..... ... +..|.++..++.+
T Consensus 30 ~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~-~~~-~~~g~~~~~v~~~~~~ 107 (338)
T cd06502 30 EDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQPGGSVICHETAHIYTDEAG-APE-FLSGVKLLPVPGENGK 107 (338)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcceeeecCC-cHH-HHcCceEEeecCCCCc
Confidence 35678899999999999778999999999999999999999999999999987654321 001 1257788777753
Q ss_pred -CHHHHHHhhcc------CCceEEEEEcCCCCCcc--ccCHHHHHHHHHhcCCEEEEeCCCCCC-----CCC--ccCCCC
Q 013210 174 -DHEMVNSAIVQ------GRTKVLYFESISNPTLA--VANIPELSRLAHDKGVTVVVDNTFSPL-----VLS--PARLGA 237 (447)
Q Consensus 174 -d~~~l~~~i~~------~~t~lV~i~~~~NptG~--v~~l~~I~~la~~~gi~livD~~~~~~-----~~~--~~~~g~ 237 (447)
|+++|++++.+ +++++|++++|+||+|. ..++++|+++|+++|+++|+|++|... ... ....++
T Consensus 108 ~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~ 187 (338)
T cd06502 108 LTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGV 187 (338)
T ss_pred CCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcC
Confidence 88999998832 27899999999998443 235788999999999999999986211 111 112368
Q ss_pred eEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC--CcHHHHHHHHHHHHHHHHH
Q 013210 238 DVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI--PHLGLRMKEHCHRALIFAR 315 (447)
Q Consensus 238 di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~--~~l~~~~~~~~~~~~~l~~ 315 (447)
|+++.|+||+++++| |++++.++++++.++...... ..+...+...+..+...+ .....+.+++.++++++.+
T Consensus 188 d~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~ 262 (338)
T cd06502 188 DSVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQA--GGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAE 262 (338)
T ss_pred CEEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHh--CCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 899999999999876 356678889988887655311 011112222222222222 2244566778888899999
Q ss_pred HHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccccCcccccccccc
Q 013210 316 RMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGS 394 (447)
Q Consensus 316 ~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~ 394 (447)
.|++++..+. +. .++++.+.++ +......+.+.+......|++. + +.
T Consensus 263 ~L~~~~~~~~-~~-------------------~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~---~--------~~- 310 (338)
T cd06502 263 ALEELGGLES-EV-------------------QTNIVLLDPVEANAVFVELSKEAIERRGEGVLF---Y--------AW- 310 (338)
T ss_pred HHHhcCCCcc-cc-------------------cCCeEEEecCCccHHHHHHHHHHHHhhhCCEEE---E--------ec-
Confidence 9998776322 21 3447777775 3233344444442100012111 1 00
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 395 STSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 395 ~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
..+.|||+++ ..+++++++.+.+++++
T Consensus 311 ----------------~~~~lRi~~~-~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 311 ----------------GEGGVRFVTH-WDTTEEDVDELLSALKA 337 (338)
T ss_pred ----------------CCCeEEEEee-cCCCHHHHHHHHHHHhc
Confidence 1267999999 88888888888888764
No 187
>PLN02231 alanine transaminase
Probab=99.93 E-value=2.3e-23 Score=213.93 Aligned_cols=228 Identities=14% Similarity=0.119 Sum_probs=162.7
Q ss_pred CccccCCCCchHHHHHHHHHHHh----C----CCeEEEeCChHHHHHHHHHHhcC-CCCeEEEeCCCchhHHHHHHhhcC
Q 013210 90 FFIYSRHFNPTVLNLSRQMAALE----G----TEAAYCTASGMSAISSVLMQLCS-SGGHVVAARTLYGGTHALLTHFFP 160 (447)
Q Consensus 90 ~~~~~r~~~~~~~~l~~~ia~l~----g----~~~~~~tsggt~A~~~al~~l~~-~gd~Vi~~~~~y~~~~~~~~~~~~ 160 (447)
.+.|+.. .-...+|+.||+++ | .+++++|+|+++|+.++++.++. +||.|+++.|.|+.+...+.
T Consensus 161 ~~~Y~~s--~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~---- 234 (534)
T PLN02231 161 TGAYSHS--QGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIA---- 234 (534)
T ss_pred ccCcCCC--CCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHH----
Confidence 3445532 22457888888876 3 35699999999999999999874 79999999999999987773
Q ss_pred cccCeeEEEeCCC-------CHHHHHHhhcc-----CCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCC
Q 013210 161 RACNITTTFVDIS-------DHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 161 ~~~g~~~~~v~~~-------d~~~l~~~i~~-----~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~ 225 (447)
..|.+++.++.+ |+++|+++++. .++++|++.+|+||||.+.+ +++|+++|++||+++|+||+|
T Consensus 235 -~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY 313 (534)
T PLN02231 235 -LHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVY 313 (534)
T ss_pred -HcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 246666655432 78999988832 16899999999999999986 678899999999999999999
Q ss_pred CCCCCCc-------cCC---------C-CeEEEeCCCccc-cCCCCeeEEEEEc---ChHHHHHHHHHhhhhhhhcCCCc
Q 013210 226 SPLVLSP-------ARL---------G-ADVVVHSISKFI-SGGADIIAGAVCG---PANLVNSMMDLHQGALMLLGPTM 284 (447)
Q Consensus 226 ~~~~~~~-------~~~---------g-~di~~~S~sK~~-g~~g~~igG~l~~---~~~~~~~l~~~~~~~~~~~g~~~ 284 (447)
..+.++. ..+ + ..++++|+||.+ |.+|.|+ ||++. ++++++.+..... . ....+..
T Consensus 314 ~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRi-Gy~~~~~~~~~l~~~l~k~~~-~-~~~s~~~ 390 (534)
T PLN02231 314 QENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFTSDVREQIYKVAS-V-NLCSNIS 390 (534)
T ss_pred hhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccce-EEEEEecCCHHHHHHHHHHHh-h-hcCCChH
Confidence 7665521 000 1 357889999965 7899998 99865 6788888876644 1 1223333
Q ss_pred cHHHHHHHHccC----CcHH-------HHHHHHHHHHHHHHHHHHhC-CCeeeCC
Q 013210 285 NPKVAFELSERI----PHLG-------LRMKEHCHRALIFARRMKKL-GLKVLYP 327 (447)
Q Consensus 285 ~~~~a~~~~~~~----~~l~-------~~~~~~~~~~~~l~~~L~~~-~~~v~~p 327 (447)
.+..+..++..- ..+. ...+.+.++++.+.+.|+++ +..+..|
T Consensus 391 ~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p 445 (534)
T PLN02231 391 GQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKA 445 (534)
T ss_pred HHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC
Confidence 444444444321 1221 22456889999999999887 3455433
No 188
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.93 E-value=1.6e-23 Score=210.05 Aligned_cols=244 Identities=15% Similarity=0.164 Sum_probs=165.1
Q ss_pred chHHHHHHHHHHHh---C--CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCe--------
Q 013210 99 PTVLNLSRQMAALE---G--TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNI-------- 165 (447)
Q Consensus 99 ~~~~~l~~~ia~l~---g--~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~-------- 165 (447)
+....+++.+|+++ + .+++++|+|+++++..+ ..++.+||+|+++.|+|+.+...+. ..|.
T Consensus 75 ~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l-~~l~~~gd~Vlv~~P~y~~~~~~~~-----~~g~~~~~~~~~ 148 (402)
T TIGR03542 75 QGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRL-QSLFGSDNTVAVQDPVYPAYVDSNV-----MAGRAGVLDDDG 148 (402)
T ss_pred CCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHHH-----HcCCcccccccc
Confidence 34467899999865 3 35699999999999985 4567889999999999999987763 2455
Q ss_pred ---eEEEeCCCCHHHHHHhh-ccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc---c--
Q 013210 166 ---TTTFVDISDHEMVNSAI-VQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP---A-- 233 (447)
Q Consensus 166 ---~~~~v~~~d~~~l~~~i-~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~---~-- 233 (447)
++..++.+..+.+...+ ...++++|++++||||||.+.+ +++|+++|++||+++|+||+|..+..+. .
T Consensus 149 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~ 228 (402)
T TIGR03542 149 RYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSI 228 (402)
T ss_pred ccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcch
Confidence 77776653211121111 1257899999999999999997 7788999999999999999996554321 1
Q ss_pred -CC----CCeEEEeCCCccccCCCCeeEEEEEcChHHH--------HHHHHHhhhhhhhcC-CCccHHHHHHHHccC--C
Q 013210 234 -RL----GADVVVHSISKFISGGADIIAGAVCGPANLV--------NSMMDLHQGALMLLG-PTMNPKVAFELSERI--P 297 (447)
Q Consensus 234 -~~----g~di~~~S~sK~~g~~g~~igG~l~~~~~~~--------~~l~~~~~~~~~~~g-~~~~~~~a~~~~~~~--~ 297 (447)
.+ +..+++.|+||.+|.+|.|+ ||++++++++ ..+..... . ...+ +.+.+.++..++... .
T Consensus 229 ~~~~~~~~~vi~~~SfSK~~g~pGlRi-G~~i~~~~l~~~~~~~~~~~~~~~~~-~-~~~~~s~~~q~~~~~~l~~~~~~ 305 (402)
T TIGR03542 229 FEIPGAKECAIEFRSFSKTAGFTGVRL-GWTVVPKELTYADGHSVIQDWERRQC-T-KFNGASYPVQRAAEAAYAGEGLQ 305 (402)
T ss_pred hhCCCCcccEEEEecCccccCCCCcce-EEEEecHHHhhcchhhHHHHHHHHhh-h-cccCCCHHHHHHHHHHHcCcchh
Confidence 11 34688999999999999999 9999998876 22211111 0 0112 223343433444322 2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhh
Q 013210 298 HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQ 370 (447)
Q Consensus 298 ~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~ 370 (447)
.+....+.+.++++.+.+.|++.+.++..|. .|.++|+.++...+...+...+.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~-------------------~~~f~~v~l~~~~~~~~l~~~l~ 359 (402)
T TIGR03542 306 PILEAISYYMENARILRKALEAAGFKVYGGE-------------------HAPYLWVKTPEGISSWDFFDFLL 359 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCceecCCC-------------------ceeEEEEECCCCCCHHHHHHHHH
Confidence 3444556678888999999988764443221 35589999975322445665554
No 189
>PLN02822 serine palmitoyltransferase
Probab=99.93 E-value=3.6e-23 Score=210.74 Aligned_cols=292 Identities=16% Similarity=0.189 Sum_probs=200.4
Q ss_pred CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHH
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHE 176 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~ 176 (447)
..+...+||++||++++.++.+++++|..++..++++++++||.|++....|.++...+ +..+.++.+++.+|.+
T Consensus 152 ~~~~~~~Lee~La~~~~~~~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~-----~ls~~~~~~~~~nd~~ 226 (481)
T PLN02822 152 TIDVHLDCETKIAKFLGTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEGVHWGIQNGL-----YLSRSTIVYFKHNDME 226 (481)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHhCCCCCEEEEeCCccHHHHHHH-----HHcCCeEEEECCCCHH
Confidence 35667899999999999866555555656889999999999999998887776665544 1246788888888888
Q ss_pred HHHHhhcc--------CCc-eEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCc--------cC---CC
Q 013210 177 MVNSAIVQ--------GRT-KVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSP--------AR---LG 236 (447)
Q Consensus 177 ~l~~~i~~--------~~t-~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~--------~~---~g 236 (447)
+++..++. +++ ++|++++++|++|.+.|+++|.++|++||+++|+||+|+...+.. .. ..
T Consensus 227 ~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~ 306 (481)
T PLN02822 227 SLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEK 306 (481)
T ss_pred HHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCC
Confidence 77765521 234 799999999999999999999999999999999999995222210 11 14
Q ss_pred CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCcc--HHHHHHHHccCCcHHHHHHHHHHHHHHHH
Q 013210 237 ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMN--PKVAFELSERIPHLGLRMKEHCHRALIFA 314 (447)
Q Consensus 237 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~--~~~a~~~~~~~~~l~~~~~~~~~~~~~l~ 314 (447)
+|+++.|++|.+|..| |++++++++++.++...... .+.++.++ +.++..++..++...+..++++++++++.
T Consensus 307 ~dii~~s~sKalg~~G----G~i~g~~~ii~~~~~~~~~~-~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~ 381 (481)
T PLN02822 307 IDIITAAMGHALATEG----GFCTGSARVVDHQRLSSSGY-VFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLH 381 (481)
T ss_pred CeEEEecchhhhhhCC----eEEEcCHHHHHHHHhcCCce-eeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 6899999999999764 99999999998877544322 22222222 12222333333333456778999999999
Q ss_pred HHHHhC-CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--------HHHHHHHHHhh-cccccccccccccC
Q 013210 315 RRMKKL-GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--------EKANRLMNYLQ-NYAQFGFMAVSLGY 384 (447)
Q Consensus 315 ~~L~~~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--------~~~~~l~~~l~-~~~~~g~~~vs~G~ 384 (447)
+.|++. ++.+..|. .++++.+.+++. .....+.+.|. . .| +.++.+.
T Consensus 382 ~~L~~~~g~~~~~~~-------------------~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e---~G-V~v~~~~ 438 (481)
T PLN02822 382 KGLSDIPGLSIGSNT-------------------LSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKE---DS-VLVVVSK 438 (481)
T ss_pred HHHHhcCCcccCCCC-------------------CCCEEEEEeCCCcccccchHHHHHHHHHHHHhc---CC-EEEEeeC
Confidence 999886 44443222 455888888631 22456777765 4 23 3444331
Q ss_pred ccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 385 YETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 385 ~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
. |... .+-.+..+|+++. ...+++.|+.+.++|+++.
T Consensus 439 ~------~~~~------------~~~~~~~lRi~is-~~~t~edI~~~~~~l~~~~ 475 (481)
T PLN02822 439 R------STLD------------KCRLPVGIRLFVS-AGHTESDILKASESLKRVA 475 (481)
T ss_pred C------CCcC------------CCCCCCcEEEEEC-CCCCHHHHHHHHHHHHHHH
Confidence 1 1100 0111346999999 8788888888888877654
No 190
>PLN02368 alanine transaminase
Probab=99.93 E-value=8.1e-24 Score=210.98 Aligned_cols=218 Identities=12% Similarity=0.092 Sum_probs=163.8
Q ss_pred HHHHHHHHHHh----C----CCeEEEeCChHHHHHHHHHHhc-CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 102 LNLSRQMAALE----G----TEAAYCTASGMSAISSVLMQLC-SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 102 ~~l~~~ia~l~----g----~~~~~~tsggt~A~~~al~~l~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
..||+.||+++ | .+++++|+|+++++..++++++ .+||.|+++.|.|+.+...+. ..|.++..++.
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~-----~~g~~~v~v~~ 184 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATIS-----LLGGTLVPYYL 184 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHH-----HcCCEEEEEec
Confidence 46777777775 4 2469999999999999999887 699999999999999988773 25667666643
Q ss_pred C-------CHHHHHHhhcc-----CCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc---c-
Q 013210 173 S-------DHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP---A- 233 (447)
Q Consensus 173 ~-------d~~~l~~~i~~-----~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~---~- 233 (447)
+ |+++|++++.. .+++++++++||||||.+.+ +++|+++|++||+++|+||+|..+.++. .
T Consensus 185 ~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~ 264 (407)
T PLN02368 185 EESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFI 264 (407)
T ss_pred ccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcc
Confidence 2 78999988831 16899999999999999986 5677888999999999999996655421 0
Q ss_pred -------C-------CCCeEEEeCCCccc-cCCCCeeEEEEE---cChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHcc
Q 013210 234 -------R-------LGADVVVHSISKFI-SGGADIIAGAVC---GPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER 295 (447)
Q Consensus 234 -------~-------~g~di~~~S~sK~~-g~~g~~igG~l~---~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~ 295 (447)
. .+..+++.|+||.| |.+|+|+ ||++ +++++++.+..... . ....+++.+.++..++..
T Consensus 265 s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRi-Gy~i~~~~~~~li~~~~~~~~-~-~~~~~~~~Q~aa~~~l~~ 341 (407)
T PLN02368 265 SAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRG-GYFEMTNIPPKTVEEIYKVAS-I-ALSPNVSGQIFMGLMVNP 341 (407)
T ss_pred cHHHHHhhhcccccccceEEEEecCCcccccCCccce-EEEEEeCCCHHHHHHHHHHhc-c-cCCCCcHHHHHHHHHhCC
Confidence 1 12578999999998 8999999 9998 58888888877643 1 133444556666555543
Q ss_pred CC----c----H---HHHHHHHHHHHHHHHHHHHhC-CCeeeCC
Q 013210 296 IP----H----L---GLRMKEHCHRALIFARRMKKL-GLKVLYP 327 (447)
Q Consensus 296 ~~----~----l---~~~~~~~~~~~~~l~~~L~~~-~~~v~~p 327 (447)
.+ . . ....+.++++++.+.+.|+++ +..+..|
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P 385 (407)
T PLN02368 342 PKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFT 385 (407)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCC
Confidence 21 1 2 234567899999999999987 4355444
No 191
>PLN03032 serine decarboxylase; Provisional
Probab=99.93 E-value=9.1e-24 Score=206.70 Aligned_cols=244 Identities=15% Similarity=0.118 Sum_probs=184.4
Q ss_pred CHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC--eE--EEeCChHHHHHHHHHHhc--CCCCeEEEeC
Q 013210 72 EPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE--AA--YCTASGMSAISSVLMQLC--SSGGHVVAAR 145 (447)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~--~~--~~tsggt~A~~~al~~l~--~~gd~Vi~~~ 145 (447)
..+.|.+++.+.+|||++.|.||+......+++.+.+|+++|.+ .+ +||+||||||..++.... .++++|+++.
T Consensus 39 ~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~ 118 (374)
T PLN03032 39 ELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASR 118 (374)
T ss_pred HHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCC
Confidence 45888888888999999999999999999999999999999974 34 999999999999987653 2456899999
Q ss_pred CCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccC--CceEEEEEcCCCCCccccCHHHHHHHHHhcC--
Q 013210 146 TLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQG--RTKVLYFESISNPTLAVANIPELSRLAHDKG-- 216 (447)
Q Consensus 146 ~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~--~t~lV~i~~~~NptG~v~~l~~I~~la~~~g-- 216 (447)
.+|+++...+. . .|..++.++.+ |+++|++++... ++.+|+++..+|++|.+.|+++|+++|+++|
T Consensus 119 ~~H~Sv~kaa~-~----lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~ 193 (374)
T PLN03032 119 ESHYSVFKAAR-M----YRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYT 193 (374)
T ss_pred CceeHHHHHHH-H----cCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCC
Confidence 99999988873 2 34444455443 899999999322 5778999999999999999999999999996
Q ss_pred ---CEEEEeCCCCCC--CC-------CccCCCCeEEEeCCCcccc-CCCCeeEEEEEcChHHHHHHHHHhh----hhhhh
Q 013210 217 ---VTVVVDNTFSPL--VL-------SPARLGADVVVHSISKFIS-GGADIIAGAVCGPANLVNSMMDLHQ----GALML 279 (447)
Q Consensus 217 ---i~livD~~~~~~--~~-------~~~~~g~di~~~S~sK~~g-~~g~~igG~l~~~~~~~~~l~~~~~----~~~~~ 279 (447)
+++|+|++|+.. ++ +. ..++|.++.|+||+++ |.| + |+++.+++.++.+..... ...+.
T Consensus 194 ~~~~~lHvDaA~gg~~~p~~~~~~~~~~-~~~vDSis~s~HK~~g~P~g--~-G~ll~r~~~~~~~~~~~~Yl~~~d~ti 269 (374)
T PLN03032 194 EDRFYIHCDGALFGLMMPFVSRAPEVTF-RKPIGSVSVSGHKFLGCPMP--C-GVALTRKKHVKALSQNVEYLNSRDATI 269 (374)
T ss_pred CCCeeEEEEccchhhhhhccCCCcccCC-CcCCcEEEECcccccCCCcC--e-EEEEEEchhhHhhccCCcccCCCCCcc
Confidence 589999999432 22 21 2369999999999999 655 4 777776666554422111 01112
Q ss_pred cCCCc--cHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCCee
Q 013210 280 LGPTM--NPKVAFELSE--RIPHLGLRMKEHCHRALIFARRMKKLGLKV 324 (447)
Q Consensus 280 ~g~~~--~~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v 324 (447)
.|+.. .....|..++ +.+.+.+++++..++++++.+.|++.+..+
T Consensus 270 ~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~ 318 (374)
T PLN03032 270 MGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTC 318 (374)
T ss_pred cCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence 33322 2344555444 335577888999999999999999887744
No 192
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.93 E-value=7.8e-23 Score=200.93 Aligned_cols=288 Identities=23% Similarity=0.249 Sum_probs=199.0
Q ss_pred CCCchHHHHHHHHHHHhCC--------CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeE
Q 013210 96 HFNPTVLNLSRQMAALEGT--------EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITT 167 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g~--------~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~ 167 (447)
...+...++++.++++++. +.+++++|+++++..++.++.++|++|+++.+.|+++...++ ..|.++
T Consensus 33 ~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~-----~~~~~~ 107 (350)
T cd00609 33 YPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAAR-----LAGAEV 107 (350)
T ss_pred CCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHH-----HCCCEE
Confidence 3344556777888877653 469999999999999999998899999999999999988773 256777
Q ss_pred EEeCCC-----CH--HHHHHhhccCCceEEEEEcCCCCCccccCHHHH---HHHHHhcCCEEEEeCCCCCCCC-------
Q 013210 168 TFVDIS-----DH--EMVNSAIVQGRTKVLYFESISNPTLAVANIPEL---SRLAHDKGVTVVVDNTFSPLVL------- 230 (447)
Q Consensus 168 ~~v~~~-----d~--~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I---~~la~~~gi~livD~~~~~~~~------- 230 (447)
..++.+ +. +.++..+ .+++++|++++++||+|.+.|++++ .++|+++|+++|+|++|+.+..
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~-~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~ 186 (350)
T cd00609 108 VPVPLDEEGGFLLDLELLEAAK-TPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPA 186 (350)
T ss_pred EEEecccccCCccCHHHHHhhc-CccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCccccc
Confidence 777654 22 5555555 7789999999999999999986544 5899999999999999854322
Q ss_pred --CccCCCCeEEEeCCCccccCCCCeeEEEEEcCh-HHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC-CcHHHHHHHH
Q 013210 231 --SPARLGADVVVHSISKFISGGADIIAGAVCGPA-NLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKEH 306 (447)
Q Consensus 231 --~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~-~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~~ 306 (447)
.....+.|+++.|+||+++.+|.++ |+++.++ ++.+.+...... .....+...+.++...+... +.+....+++
T Consensus 187 ~~~~~~~~~~~~~~s~~K~~~~~g~~~-G~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 264 (350)
T cd00609 187 LALLDAYERVIVLRSFSKTFGLPGLRI-GYLIAPPEELLERLKKLLPY-TTSGPSTLSQAAAAAALDDGEEHLEELRERY 264 (350)
T ss_pred ccCcCccCcEEEEeecccccCCcccce-EEEecCHHHHHHHHHHHHHh-cccCCChHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 1233468999999999999777777 8888888 788887765441 11222333333333333333 3455556678
Q ss_pred HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCcc
Q 013210 307 CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYE 386 (447)
Q Consensus 307 ~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~ 386 (447)
.++++++.+.|++.+.....+. ..|.++++.+........+.+.|.. .| +.+..+...
T Consensus 265 ~~~~~~l~~~L~~~~~~~~~~~------------------~~g~~~~~~~~~~~~~~~~~~~l~~---~g-i~i~~~~~~ 322 (350)
T cd00609 265 RRRRDALLEALKELGPLVVVKP------------------SGGFFLWLDLPEGDDEEFLERLLLE---AG-VVVRPGSAF 322 (350)
T ss_pred HHHHHHHHHHHHhcCCccccCC------------------CccEEEEEecCCCChHHHHHHHHHh---CC-EEEeccccc
Confidence 8899999999988765321111 2456888888754334455555554 23 344433211
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013210 387 TLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 437 (447)
Q Consensus 387 s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 437 (447)
. ......+||+++ .. ++.++.+.++|+
T Consensus 323 ~---------------------~~~~~~iRi~~~-~~--~~~i~~~~~al~ 349 (350)
T cd00609 323 G---------------------EGGEGFVRLSFA-TP--EEELEEALERLA 349 (350)
T ss_pred c---------------------cCCCCeEEEEee-CC--HHHHHHHHHHhh
Confidence 0 012478999999 66 777777777664
No 193
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.93 E-value=3.2e-23 Score=209.05 Aligned_cols=294 Identities=17% Similarity=0.140 Sum_probs=186.0
Q ss_pred HHHHHHHHHHh----C----CCeEEEeCChHHHHHHHHHHhcC-----CCCeEEE-eCCCchhHHHHHHhhc-CcccCee
Q 013210 102 LNLSRQMAALE----G----TEAAYCTASGMSAISSVLMQLCS-----SGGHVVA-ARTLYGGTHALLTHFF-PRACNIT 166 (447)
Q Consensus 102 ~~l~~~ia~l~----g----~~~~~~tsggt~A~~~al~~l~~-----~gd~Vi~-~~~~y~~~~~~~~~~~-~~~~g~~ 166 (447)
..+++.||+++ | .+.|++|+|+++|+.+++..++. +||.|++ ..|+|+++........ ....+..
T Consensus 77 ~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~ 156 (416)
T PRK09440 77 DELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPN 156 (416)
T ss_pred HHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccc
Confidence 46778888775 3 25699999999999999998885 5899999 6999999876442100 0001222
Q ss_pred EEEeCC------CCHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC------
Q 013210 167 TTFVDI------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS------ 231 (447)
Q Consensus 167 ~~~v~~------~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~------ 231 (447)
+..++. .|+++|+ + .++++++++++||||||.+.+ +++|+++|+++|+++|+||+|..+...
T Consensus 157 ~~~~~~~~~~~~~d~~~l~--~-~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~ 233 (416)
T PRK09440 157 IELLPEGQFKYHVDFEHLH--I-DEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEA 233 (416)
T ss_pred cccccccccccCCCHHHcc--c-CCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhc
Confidence 222221 2677776 3 567899999999999999997 668888999999999999999532211
Q ss_pred -ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcH---HH-HHHHH
Q 013210 232 -PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHL---GL-RMKEH 306 (447)
Q Consensus 232 -~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l---~~-~~~~~ 306 (447)
+...+..+++.|+||+ +.+|.|+ ||+++++++++.+....... ....+.+.+.++..++..-... .. ..+.+
T Consensus 234 ~~~~~~~vI~~~SfSK~-~~pGlRi-G~~i~~~~l~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 310 (416)
T PRK09440 234 TPLWNPNIILCMSLSKL-GLPGVRC-GIVIADEEIIEALSNMNGII-SLAPGRLGPAIAAEMIESGDLLRLSETVIRPFY 310 (416)
T ss_pred CccccCCeEEEeccccc-CCCcceE-EEEeCCHHHHHHHHHHHHHh-ccCCCcHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 1112467999999996 8899999 99999999998887765521 1223444455555554432221 12 23446
Q ss_pred HHHHHHHHHHHHhC----CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHhhccccccccccc
Q 013210 307 CHRALIFARRMKKL----GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYLQNYAQFGFMAVS 381 (447)
Q Consensus 307 ~~~~~~l~~~L~~~----~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~l~~~l~~~~~~g~~~vs 381 (447)
+++++.+.+.|.+. +..+..|. .|.++|+.++. ......+.+.+... | +.+.
T Consensus 311 ~~r~~~~~~~L~~~l~~~~~~~~~p~-------------------gg~fiw~~~~~~~~~~~~~~~~l~~~---g-V~v~ 367 (416)
T PRK09440 311 RQKVQLAIALLRRYLPDEPCLIHKPE-------------------GAIFLWLWFKDLPITTEELYQRLKAR---G-VLVV 367 (416)
T ss_pred HHHHHHHHHHHHHhcccCCeEEecCC-------------------CceEEEEECCCCCCCHHHHHHHHHHC---C-EEEe
Confidence 67777777887654 12333232 46789998874 22345666666542 3 4555
Q ss_pred ccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC--CCHHHHHHHHHHHHHHh
Q 013210 382 LGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL--GTLDQRWSQFEKALSRM 439 (447)
Q Consensus 382 ~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~--~~~~~~i~~l~~al~~~ 439 (447)
.|.... +.... ..+...+++|||++ . ++.++.++.|.++++++
T Consensus 368 pg~~F~----~~~~~----------~~~~~~~~iRis~~-~~~~~l~~~i~~l~~~~~~~ 412 (416)
T PRK09440 368 PGHYFF----PGLDE----------DWPHAHQCIRMNYV-QDDEEIEKGIAILAEEVEKA 412 (416)
T ss_pred chHhhC----CCCcc----------ccCCcCceEEEEec-CCHHHHHHHHHHHHHHHHHH
Confidence 442210 00000 00001368999997 4 33444455555555544
No 194
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.93 E-value=2.8e-23 Score=204.95 Aligned_cols=289 Identities=14% Similarity=0.168 Sum_probs=196.1
Q ss_pred chHHHHHHHHHHHhCCC----eEEEeCChHHHHHHHHHHhcCCCCeEEEeCC-CchhHHHHHHhhcCcccCeeEEEeCCC
Q 013210 99 PTVLNLSRQMAALEGTE----AAYCTASGMSAISSVLMQLCSSGGHVVAART-LYGGTHALLTHFFPRACNITTTFVDIS 173 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~----~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~-~y~~~~~~~~~~~~~~~g~~~~~v~~~ 173 (447)
...+++++.+++++|++ .+++++||++++..++.+++.++|++++..+ .|+.....+ ... .|.++..++.+
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~~~~~---a~~-~g~~~~~i~~~ 106 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKI---CEY-LGIPHTDLNFS 106 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhHHHHH---HHH-cCCceEEEecC
Confidence 66789999999999975 4678999999999999999888887665554 444322211 122 57777776643
Q ss_pred -----CHHHHHHhhcc-CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCC
Q 013210 174 -----DHEMVNSAIVQ-GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSIS 245 (447)
Q Consensus 174 -----d~~~l~~~i~~-~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~s 245 (447)
|++++++++.. +++++|++.+++|++|.+.|+++|.++|++||+++|+|+++ +...++...+++|+++.|++
T Consensus 107 ~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~ 186 (355)
T TIGR03301 107 EYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASAN 186 (355)
T ss_pred CCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhcCccEEEecCC
Confidence 78999998832 45678888899999999999999999999999999999987 33345555668999999999
Q ss_pred ccc-cCCCCeeEEEEEcChHHHHHHHHHhhh---------------hhhhcCCCcc-HHHHHHHHccC---CcHHHHHHH
Q 013210 246 KFI-SGGADIIAGAVCGPANLVNSMMDLHQG---------------ALMLLGPTMN-PKVAFELSERI---PHLGLRMKE 305 (447)
Q Consensus 246 K~~-g~~g~~igG~l~~~~~~~~~l~~~~~~---------------~~~~~g~~~~-~~~a~~~~~~~---~~l~~~~~~ 305 (447)
|++ |++| + |+++.++++++.+...... .....+.+.. ..++..++..+ ..+.+..++
T Consensus 187 K~l~~~~G--~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~ 263 (355)
T TIGR03301 187 KCLEGVPG--F-GFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIAR 263 (355)
T ss_pred cccccCCc--e-eEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 987 5555 4 9999999888776521000 0001111111 11212222222 225667778
Q ss_pred HHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhccccccccccccc
Q 013210 306 HCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQNYAQFGFMAVSLG 383 (447)
Q Consensus 306 ~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~l~~~l~~~~~~g~~~vs~G 383 (447)
++++++++.+.|++.+.++..|... ..+.++++.++.. .....+.+.|... | +.++.|
T Consensus 264 ~~~~~~~~~~~L~~~g~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g-i~i~~~ 323 (355)
T TIGR03301 264 YRRNRELLVDGLRALGFQPLLPERW----------------QSPIIVSFLYPDDPDFDFDDFYQELKER---G-FVIYPG 323 (355)
T ss_pred HHHHHHHHHHHHHHcCCeeecCCCC----------------CCCcEEEEECCCCCcchHHHHHHHHHHC---C-EEEECC
Confidence 8999999999998887765443210 1234678888741 2345677777753 3 344333
Q ss_pred CccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 384 YYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 384 ~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+. ...+.||||+. ..++.+.++.+.++|+++
T Consensus 324 ~~------------------------~~~~~iRis~~-~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 324 KL------------------------TLADTFRIGTI-GEIDAADIERLLEAIKDA 354 (355)
T ss_pred cc------------------------ccccEEEEecC-CCCCHHHHHHHHHHHHhh
Confidence 10 01267999986 567788888888887653
No 195
>PRK08354 putative aminotransferase; Provisional
Probab=99.93 E-value=3e-23 Score=200.93 Aligned_cols=159 Identities=18% Similarity=0.205 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHH
Q 013210 101 VLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNS 180 (447)
Q Consensus 101 ~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ 180 (447)
...+++.+|+..|. ++++|+|+++|+.+++.. +.+||.|+++.|+|+.+...++ ..|.++..++ .|++.+++
T Consensus 42 ~~~l~~~ia~~~~~-~I~vt~G~~~al~~~~~~-~~~gd~vlv~~P~y~~~~~~~~-----~~g~~~~~~~-~d~~~l~~ 113 (311)
T PRK08354 42 YEWLEEEFSKLFGE-PIVITAGITEALYLIGIL-ALRDRKVIIPRHTYGEYERVAR-----FFAARIIKGP-NDPEKLEE 113 (311)
T ss_pred hHHHHHHHHHHHCC-CEEECCCHHHHHHHHHHh-hCCCCeEEEeCCCcHHHHHHHH-----HcCCEEeecC-CCHHHHHH
Confidence 36799999999984 799999999999988754 4589999999999999988773 3677777664 47889988
Q ss_pred hhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCcc--CCCCeEEEeCCCccccCCCCee
Q 013210 181 AIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSPA--RLGADVVVHSISKFISGGADII 255 (447)
Q Consensus 181 ~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~~--~~g~di~~~S~sK~~g~~g~~i 255 (447)
++ + +++++++++||||||.+.+ +++|+++|+++|+++|+||+|..+.++.. .....+++.|+||.++.+|.|+
T Consensus 114 ~~-~-~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~GlRi 191 (311)
T PRK08354 114 LV-E-RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPGIRV 191 (311)
T ss_pred hh-c-CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCcccee
Confidence 87 4 5778999999999999987 56777888899999999999977654321 2357899999999999999999
Q ss_pred EEEEEcChHHHHHHHHHh
Q 013210 256 AGAVCGPANLVNSMMDLH 273 (447)
Q Consensus 256 gG~l~~~~~~~~~l~~~~ 273 (447)
||+++ +.+.++..+
T Consensus 192 -G~~v~---~~~~l~~~~ 205 (311)
T PRK08354 192 -GYVKG---FEEAFRSVR 205 (311)
T ss_pred -eeeee---hHHHHHHcC
Confidence 99987 445555444
No 196
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.92 E-value=4.4e-23 Score=206.05 Aligned_cols=275 Identities=15% Similarity=0.061 Sum_probs=192.4
Q ss_pred cccccCCH-HHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC----eEEE--eCChHHHHHHHHHHhcC--
Q 013210 66 ATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE----AAYC--TASGMSAISSVLMQLCS-- 136 (447)
Q Consensus 66 tt~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~----~~~~--tsggt~A~~~al~~l~~-- 136 (447)
||++.|++ +.|...++..++||++ .++.. ...+++++.+|+++|.+ .+.+ |+||||||++++.+...
T Consensus 50 tt~~~p~~~~~~~~~l~~~~~np~s---~~~~~-~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~ 125 (431)
T TIGR01788 50 TTWMEPEARKLMDETINKNMIDKDE---YPQTA-EIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRW 125 (431)
T ss_pred CCCCCHHHHHHHHHHHhcCCCCccc---CccHH-HHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHH
Confidence 67777776 7788888878888866 35544 67788999999999976 3555 89999999999866431
Q ss_pred ------CC-----CeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC------CHHHHHHhhccCCceEEEEEcCCCCC
Q 013210 137 ------SG-----GHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS------DHEMVNSAIVQGRTKVLYFESISNPT 199 (447)
Q Consensus 137 ------~g-----d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~i~~~~t~lV~i~~~~Npt 199 (447)
.| .+|+++..+|.++...+. ..|++++.++++ |+++|++++ +++|.+|+++.++|++
T Consensus 126 ~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~-----~lg~~v~~i~~d~~~~~vd~~~L~~~i-~~~t~lV~~t~g~t~t 199 (431)
T TIGR01788 126 RKRMEAAGKPTDKPNLVMGSNVQVCWEKFAR-----YFDVELREVPMDPGRYVIDPEQVVEAV-DENTIGVVCILGTTYT 199 (431)
T ss_pred HHHHHhcCCCCCCcEEEEcCcchHHHHHHHH-----HcCceeEEEecCCCceeeCHHHHHHHH-hhCCeEEEEEeCCCCC
Confidence 12 379999999999987763 246677666643 789999999 7889999999999999
Q ss_pred ccccCHHHHHHHHHhc------CCEEEEeCCCCCCC---------CCccCCCCeEEEeCCCccc-cCCCCeeEEEEEcCh
Q 013210 200 LAVANIPELSRLAHDK------GVTVVVDNTFSPLV---------LSPARLGADVVVHSISKFI-SGGADIIAGAVCGPA 263 (447)
Q Consensus 200 G~v~~l~~I~~la~~~------gi~livD~~~~~~~---------~~~~~~g~di~~~S~sK~~-g~~g~~igG~l~~~~ 263 (447)
|.++|+++|+++|+++ |+++|+|.+|+.+. .+....++|.++.|.||++ +++| + |+++.++
T Consensus 200 G~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g--~-G~l~~r~ 276 (431)
T TIGR01788 200 GEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPG--V-GWVIWRD 276 (431)
T ss_pred cccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCC--c-EEEEEeC
Confidence 9999999999999999 99999999995321 1222337899999999988 7776 4 7776543
Q ss_pred H--HHHHHHHH---hhhh---hhhcCCCc--cHHHHHHHHccC--CcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCC
Q 013210 264 N--LVNSMMDL---HQGA---LMLLGPTM--NPKVAFELSERI--PHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLE 330 (447)
Q Consensus 264 ~--~~~~l~~~---~~~~---~~~~g~~~--~~~~a~~~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~ 330 (447)
. +.+.+... -.+. ....+... .....|..++.+ ..+.+..++..++++++.+.|++.+. ++..|. +
T Consensus 277 ~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~-~ 355 (431)
T TIGR01788 277 EEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDG-S 355 (431)
T ss_pred hHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCC-C
Confidence 3 22222110 0000 00111111 122234443333 34667778889999999999998864 666542 1
Q ss_pred CCchhHHHHHHhccCCCcCcEEEEEeCC----HHHHHHHHHHhhc
Q 013210 331 DHPHHELLKSMANKEYGFGGLLCLDMET----EEKANRLMNYLQN 371 (447)
Q Consensus 331 ~~p~~~l~~~~~~~~~g~g~~~~~~l~~----~~~~~~l~~~l~~ 371 (447)
..++++|.+++ ......+.+.|..
T Consensus 356 -----------------~~~iV~Fr~~~~~~~~~~~~~l~~~L~~ 383 (431)
T TIGR01788 356 -----------------GIPLVAFKLKDDADPGYTLYDLSHRLRE 383 (431)
T ss_pred -----------------CceEEEEEeCCCCCCCcCHHHHHHHHHH
Confidence 23499999874 1234566777765
No 197
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.92 E-value=4.8e-23 Score=206.63 Aligned_cols=287 Identities=17% Similarity=0.143 Sum_probs=193.8
Q ss_pred chHHHHHHHHHHHhCCC--eEEEeCChHHHHHHH-HHHhcCC--CCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC
Q 013210 99 PTVLNLSRQMAALEGTE--AAYCTASGMSAISSV-LMQLCSS--GGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 173 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~a-l~~l~~~--gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~ 173 (447)
+..+++++.+++++|.+ .++++++|+++.+.+ +..++.+ ||+|+++++.|+++...+.....+ .|.+++.++.+
T Consensus 64 ~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~-~g~~~~~v~~~ 142 (398)
T cd00613 64 QALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEP-LGIEVVEVPSD 142 (398)
T ss_pred HHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhccc-CCcEEEEeccC
Confidence 45678999999999986 677777666554444 4445565 999999999999998887544333 56888877764
Q ss_pred -----CHHHHHHhhccCCceEEEEEcCCCCCccccCH-HHHHHHHHhcCCEEEEeCCCC--CCCCCccCCCCeEEEeCCC
Q 013210 174 -----DHEMVNSAIVQGRTKVLYFESISNPTLAVANI-PELSRLAHDKGVTVVVDNTFS--PLVLSPARLGADVVVHSIS 245 (447)
Q Consensus 174 -----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l-~~I~~la~~~gi~livD~~~~--~~~~~~~~~g~di~~~S~s 245 (447)
|++++++++ +++|++|++++|+ ++|.+.|+ ++|+++|+++|+++|+|++|. ....++..+++|+++.|+|
T Consensus 143 ~~~~~d~~~l~~~i-~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~ 220 (398)
T cd00613 143 EGGTVDLEALKEEV-SEEVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQ 220 (398)
T ss_pred CCCCcCHHHHHHhc-CCCeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeecc
Confidence 689999999 7889999999985 89999985 999999999999999999883 2344455678999999999
Q ss_pred ccccCC---CCeeEEEEEcChHHHHHHHHHh---------------------------hhhh-hhcCCCccHHHHHHHHc
Q 013210 246 KFISGG---ADIIAGAVCGPANLVNSMMDLH---------------------------QGAL-MLLGPTMNPKVAFELSE 294 (447)
Q Consensus 246 K~~g~~---g~~igG~l~~~~~~~~~l~~~~---------------------------~~~~-~~~g~~~~~~~a~~~~~ 294 (447)
|++++. |.+. |+++.++++++.+.... .+.. ...+.....+.++..+.
T Consensus 221 K~~~p~g~Ggp~~-g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~ 299 (398)
T cd00613 221 KTGVPHGGGGPGA-GFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIV 299 (398)
T ss_pred ccCCCCCCCCCce-eEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHH
Confidence 998321 4444 99998887776541100 0000 01111112222332222
Q ss_pred cC--CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhh
Q 013210 295 RI--PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQ 370 (447)
Q Consensus 295 ~~--~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~l~~~l~ 370 (447)
.+ ..+.+..+++.++++++.+.|++++.... +. .+ ....++|.++. ......+.+.|.
T Consensus 300 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~---~~--------------~~~~v~~~~~~~~~~~~~~~~~~L~ 361 (398)
T cd00613 300 YLGPEGLKEIAERAHLNANYLAKRLKEVGGVLP-FN---GP--------------FFHEFVLRLPPLYGIRAEDLAKALI 361 (398)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-CC---CC--------------eeEEEEEEcCCcchHHHHHHHHhhh
Confidence 22 23455667889999999999988765321 11 01 12356777764 334677877776
Q ss_pred cccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013210 371 NYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 436 (447)
Q Consensus 371 ~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 436 (447)
.. |+ .+.. .. -...+.||+|+. ..+++++|+.+.++|
T Consensus 362 ~~---gi-~~~~-----------~~-------------~~~~~~lRis~~-~~~t~edid~~~~~L 398 (398)
T cd00613 362 DG---GF-HAPT-----------MY-------------LPVDGTLMIEPT-ETETKEELDALLEAL 398 (398)
T ss_pred hc---Cc-cccc-----------cc-------------cCCCCeEEEEcC-CCCCHHHHHHHHHhC
Confidence 52 32 1110 00 012468999999 999999999987764
No 198
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.92 E-value=2.1e-23 Score=211.62 Aligned_cols=144 Identities=12% Similarity=0.247 Sum_probs=117.1
Q ss_pred eEEEeCChHHHHHHHHHH-----hcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC-------CCHHHHHHhhc
Q 013210 116 AAYCTASGMSAISSVLMQ-----LCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI-------SDHEMVNSAIV 183 (447)
Q Consensus 116 ~~~~tsggt~A~~~al~~-----l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~i~ 183 (447)
++++|+|+++|+..++.+ ++.+||+|+++.|.|+.+...+. +. . .+..++.++. .|+++|++++
T Consensus 163 ~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~-l~-g-~~~~~v~v~~~~~~~f~~d~~~l~~~~- 238 (527)
T PRK09275 163 DLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPE-LP-R-YDLEVVHINADEENEWQYPDSELEKLR- 238 (527)
T ss_pred eEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHH-Hc-C-CCeEEEEeecCcccCCCCCHHHHHhhc-
Confidence 699999999999999886 68999999999999999987652 21 1 3555555542 1678999988
Q ss_pred cCCceEEEEEcCCCCCccccC---HHHHHHHHHh--cCCEEEEeCCCCCCCCCcc---C--CCCeEEEeCCCccccCCCC
Q 013210 184 QGRTKVLYFESISNPTLAVAN---IPELSRLAHD--KGVTVVVDNTFSPLVLSPA---R--LGADVVVHSISKFISGGAD 253 (447)
Q Consensus 184 ~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~--~gi~livD~~~~~~~~~~~---~--~g~di~~~S~sK~~g~~g~ 253 (447)
++++++|++++|+||||.+.+ +++|+++|++ +++++|+||+|..+..... . ....+++.|+||.||.+|+
T Consensus 239 ~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~ 318 (527)
T PRK09275 239 DPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGW 318 (527)
T ss_pred CCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHh
Confidence 889999999999999999997 6788888964 5999999999965543211 1 1468999999999999999
Q ss_pred eeEEEEEcChH
Q 013210 254 IIAGAVCGPAN 264 (447)
Q Consensus 254 ~igG~l~~~~~ 264 (447)
|+ ||++++++
T Consensus 319 Rl-G~i~~~~~ 328 (527)
T PRK09275 319 RL-GVIALHED 328 (527)
T ss_pred HH-hhhhcCch
Confidence 99 99998775
No 199
>PRK08637 hypothetical protein; Provisional
Probab=99.92 E-value=1.4e-22 Score=202.40 Aligned_cols=254 Identities=14% Similarity=0.091 Sum_probs=165.7
Q ss_pred CccccCCCCchHHHHHHHHHHHhC-------C---CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhc
Q 013210 90 FFIYSRHFNPTVLNLSRQMAALEG-------T---EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFF 159 (447)
Q Consensus 90 ~~~~~r~~~~~~~~l~~~ia~l~g-------~---~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~ 159 (447)
.+.|+.. .....+++.+++.+. . +++++|+|+++++.+++.+++++||.|+++.|.|+.+...+..
T Consensus 37 ~~~Y~~~--~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~-- 112 (388)
T PRK08637 37 IFPYAPP--QGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFNT-- 112 (388)
T ss_pred ccCCCCC--CCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHH--
Confidence 4556542 224578888876641 1 3479999999999999999999999999999999988765421
Q ss_pred CcccCeeEEEeCC--C----CHHHHHHhhc---cCCceEEEEEcCCCCCccccC---HHHHHHHHHh-----cCCEEEEe
Q 013210 160 PRACNITTTFVDI--S----DHEMVNSAIV---QGRTKVLYFESISNPTLAVAN---IPELSRLAHD-----KGVTVVVD 222 (447)
Q Consensus 160 ~~~~g~~~~~v~~--~----d~~~l~~~i~---~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~-----~gi~livD 222 (447)
..|.++..++. + |++++++.++ .+.+.++++++||||||.+.+ +++|+++|++ |++++|+|
T Consensus 113 --~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~D 190 (388)
T PRK08637 113 --RRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVD 190 (388)
T ss_pred --hcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEec
Confidence 14777777664 2 7899988873 245567778899999999986 5567776664 89999999
Q ss_pred CCCCCCCCCc-------cC---C-CCe--EEEeCCCccccCCCCeeEEEEEcC------hHHHHHHHHHhhh---hhhhc
Q 013210 223 NTFSPLVLSP-------AR---L-GAD--VVVHSISKFISGGADIIAGAVCGP------ANLVNSMMDLHQG---ALMLL 280 (447)
Q Consensus 223 ~~~~~~~~~~-------~~---~-g~d--i~~~S~sK~~g~~g~~igG~l~~~------~~~~~~l~~~~~~---~~~~~ 280 (447)
|+|..+.++. .. . +.. +.+.|+||.++.+|.|+ ||++.+ +++++.+...... .....
T Consensus 191 e~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRl-G~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 269 (388)
T PRK08637 191 DAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRV-GFITFGTKAGSSQTVKEALEKKVKGLIRSNISN 269 (388)
T ss_pred ccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccce-EEEEEccccCCcHHHHHHHHHHHHHHhhcccCC
Confidence 9996664321 11 1 222 34459999999999999 998743 5777766532110 01122
Q ss_pred CCCccHHHHHHHHccCCc---HHHHHHHHHHHHHHHHHHHHhCCC----eeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013210 281 GPTMNPKVAFELSERIPH---LGLRMKEHCHRALIFARRMKKLGL----KVLYPGLEDHPHHELLKSMANKEYGFGGLLC 353 (447)
Q Consensus 281 g~~~~~~~a~~~~~~~~~---l~~~~~~~~~~~~~l~~~L~~~~~----~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 353 (447)
.+.+.+.++..++..-.. +......++++++.+.+.|++.+. .+..| ..|.++|
T Consensus 270 ~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~-------------------~~g~~~~ 330 (388)
T PRK08637 270 GPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPF-------------------NSGYFMC 330 (388)
T ss_pred CCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc-------------------cceEEEE
Confidence 344444444444432111 122233466667777777766531 22211 2466888
Q ss_pred EEeCCHHHHHHHHHHhh
Q 013210 354 LDMETEEKANRLMNYLQ 370 (447)
Q Consensus 354 ~~l~~~~~~~~l~~~l~ 370 (447)
+.+++. +...|.+.|.
T Consensus 331 ~~l~~~-~~~~l~~~l~ 346 (388)
T PRK08637 331 LKLKGV-DAEELRVHLL 346 (388)
T ss_pred ecCChH-HHHHHHHHHh
Confidence 888743 3567777764
No 200
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=1.2e-22 Score=188.96 Aligned_cols=214 Identities=15% Similarity=0.182 Sum_probs=164.3
Q ss_pred chHHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEe
Q 013210 99 PTVLNLSRQMAALEG--------TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 170 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g--------~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v 170 (447)
.-+..+|+.+|++++ ++++++|+|+.+|+..++.++.++|-.|+++.|.|+-+.... ...|++++++
T Consensus 103 ~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a-----~~~~lEVR~y 177 (447)
T KOG0259|consen 103 VGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRA-----IYSGLEVRYY 177 (447)
T ss_pred cccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhh-----hhcCceeEee
Confidence 344678999999953 467999999999999999999999999999999999775544 2368899988
Q ss_pred CCC-------CHHHHHHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCcc------C
Q 013210 171 DIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSPA------R 234 (447)
Q Consensus 171 ~~~-------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~~------~ 234 (447)
+.. |++.+|+++ +++|.++++.+|+||.|.+.. |++|+++|+++|+++|.||+|+++.+... .
T Consensus 178 dlLPe~~weIDL~~veal~-DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~ 256 (447)
T KOG0259|consen 178 DLLPEKDWEIDLDGVEALA-DENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGK 256 (447)
T ss_pred cccCcccceechHHHHHhh-ccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhh
Confidence 764 999999988 999999999999999999985 88999999999999999999977655321 1
Q ss_pred C---CCeEEEeCCCccccCCCCeeEEEEEcCh--------HHHHHHHHHhhhhhhhcCCCccHHHHHH-HHc-cCC-cHH
Q 013210 235 L---GADVVVHSISKFISGGADIIAGAVCGPA--------NLVNSMMDLHQGALMLLGPTMNPKVAFE-LSE-RIP-HLG 300 (447)
Q Consensus 235 ~---g~di~~~S~sK~~g~~g~~igG~l~~~~--------~~~~~l~~~~~~~~~~~g~~~~~~~a~~-~~~-~~~-~l~ 300 (447)
+ -..+.++|.||-+-.||+|+ ||++..+ ..++.+....+ ...|+....++|.- .+. .-+ .+.
T Consensus 257 fssiVPVitlggisKrW~VPGWRl-GWi~~hD~~gvf~~~~~~q~~~~~~~---~~~~p~TiiQ~AlP~IL~kTp~efF~ 332 (447)
T KOG0259|consen 257 FSSIVPVITLGGISKRWIVPGWRL-GWIALHDPRGVFRDTKVVQGIKNFLD---IIPGPATIIQGALPDILEKTPEEFFD 332 (447)
T ss_pred ccccCceEeecccccccccCCcee-eeEEEecccccccchHHHHHHHHHHh---ccCCccHhHHHHhHHHHHhChHHHHH
Confidence 1 25788999999999999999 9986532 23344444433 23444433333332 222 112 245
Q ss_pred HHHHHHHHHHHHHHHHHHhCCC
Q 013210 301 LRMKEHCHRALIFARRMKKLGL 322 (447)
Q Consensus 301 ~~~~~~~~~~~~l~~~L~~~~~ 322 (447)
.+..-++.+++...++|++++.
T Consensus 333 k~~~~lk~na~l~y~~Lk~IP~ 354 (447)
T KOG0259|consen 333 KKLSFLKSNADLCYSRLKDIPC 354 (447)
T ss_pred HHHHHHHhhHHHHHHHHhcCCC
Confidence 5666689999999999999865
No 201
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.92 E-value=6.2e-23 Score=205.93 Aligned_cols=287 Identities=17% Similarity=0.224 Sum_probs=196.9
Q ss_pred CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC---------CC-CeEEEeCCCchhHHHHHHhh--------
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCS---------SG-GHVVAARTLYGGTHALLTHF-------- 158 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~---------~g-d~Vi~~~~~y~~~~~~~~~~-------- 158 (447)
..+...+++++++++.+.+.++|++||++|+..+++.+.. +| ++|++....||+....+...
T Consensus 81 ~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~ 160 (401)
T PRK00854 81 RNDQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARG 160 (401)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccc
Confidence 3567789999999999998999999999999999987742 23 58898888888764333111
Q ss_pred -cCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCCc-
Q 013210 159 -FPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLSP- 232 (447)
Q Consensus 159 -~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~~- 232 (447)
... ....+.+++..|+++|++++ .+++++|++++|+||+|.+.| +++|.++|++||+++|+||+|+++....
T Consensus 161 ~~~~-~~~~~~~~~~~d~~~le~~i-~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~ 238 (401)
T PRK00854 161 GFGP-FTPGFRVVPFGDAEALEAAI-TPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGK 238 (401)
T ss_pred cCCC-CCCCeEEeCCCCHHHHHHHh-CCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCch
Confidence 111 12345677778999999999 778999999999999999987 9999999999999999999996564432
Q ss_pred ------cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHH
Q 013210 233 ------ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEH 306 (447)
Q Consensus 233 ------~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~ 306 (447)
.....|+++. +|++++..+++ |++++++++++.+..... ..+..++.+.+.++...+..++. ....+++
T Consensus 239 ~~~~~~~g~~~D~~~~--~K~l~gg~~~i-g~v~~~~~~~~~l~~~~~-~~t~~~~~~~~aa~~a~L~~l~~-~~~~~~~ 313 (401)
T PRK00854 239 LLAEEHEGIEADVTLI--GKALSGGFYPV-SAVLSNSEVLGVLKPGQH-GSTFGGNPLACAVARAALKVLTE-EGMIENA 313 (401)
T ss_pred HhHHhhcCCCCCEEEe--cccccCCccCe-EEEEEcHHHHhcccCCCC-CCCCCcCHHHHHHHHHHHHHHHH-cCHHHHH
Confidence 1234677774 69998655677 899999998887753322 11122322323233333322221 1245677
Q ss_pred HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccccCc
Q 013210 307 CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYY 385 (447)
Q Consensus 307 ~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~ 385 (447)
+++.+++.+.|++.+.... . ...+.|.++.+.+. +......+.+.|... |+ .++.
T Consensus 314 ~~~~~~l~~~L~~~~~~~~--~---------------~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~---GV-~v~~--- 369 (401)
T PRK00854 314 AEMGAYFLEGLRSIRSNIV--R---------------EVRGRGLMLAVELEPEAGGARQYCEALKER---GL-LAKD--- 369 (401)
T ss_pred HHHHHHHHHHHHhhccCce--E---------------EEeccceEEEEEEecCchhHHHHHHHHHHC---Ce-EEec---
Confidence 8888899999987643211 0 00146778888774 333456788887752 32 2210
Q ss_pred cccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 386 ETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 386 ~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
...+.|||++. ...+++.|+.+.++|++.
T Consensus 370 ------------------------~~~~~lR~~p~-~~~t~e~i~~~i~~l~~~ 398 (401)
T PRK00854 370 ------------------------THDHTIRLAPP-LVITREQVDWALEQIAKV 398 (401)
T ss_pred ------------------------CCCCEEEEeCC-cccCHHHHHHHHHHHHHH
Confidence 01368999998 777777777777777654
No 202
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.92 E-value=3.1e-23 Score=208.31 Aligned_cols=332 Identities=17% Similarity=0.189 Sum_probs=208.0
Q ss_pred ccccccccccccCCH-HHHHHhhcCCC--CCCCCCccccCCCCchHHH-HHHHHHHHhCCCeE-EEeCChHHHHHHHHHH
Q 013210 59 NMSIEASATFTVMEP-ETMRRMFAGEL--GPDRDFFIYSRHFNPTVLN-LSRQMAALEGTEAA-YCTASGMSAISSVLMQ 133 (447)
Q Consensus 59 ~~pi~~att~~~~~~-~~~~~~~~~~~--~~~~~~~~~~r~~~~~~~~-l~~~ia~l~g~~~~-~~tsggt~A~~~al~~ 133 (447)
+..+..+.+++.|.+ +.+...+...| ++|++.+..+....+.+++ .++.+++++|++.. ++++||++|+..++.+
T Consensus 21 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~ 100 (402)
T cd00378 21 TLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQANLAVYFA 100 (402)
T ss_pred CeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCCcHHHHHHHHHH
Confidence 344566777777766 66655554444 5666555444433344444 45567899998763 4445789999999999
Q ss_pred hcCCCCeEEEeCCCchhHHHHHHh-hcCcccCeeEEEeC--CC------CHHHHHHhhccCCceEEEEEcCCCCCccccC
Q 013210 134 LCSSGGHVVAARTLYGGTHALLTH-FFPRACNITTTFVD--IS------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN 204 (447)
Q Consensus 134 l~~~gd~Vi~~~~~y~~~~~~~~~-~~~~~~g~~~~~v~--~~------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~ 204 (447)
++++||+|+++.++|+++...... .... .|.++..++ .+ |++++++++.++++++|++++++|| ...|
T Consensus 101 l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~~~~ 177 (402)
T cd00378 101 LLEPGDTIMGLDLSHGGHLTHGSFTKVSA-SGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--RPID 177 (402)
T ss_pred hcCCCCEEEEecCccCccccccccccccc-cceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--CCcC
Confidence 999999999999999877544211 1222 565544432 22 8999999884468999998888764 6779
Q ss_pred HHHHHHHHHhcCCEEEEeCCC-CCCCC-----CccCCCCeEEEeCCCccccCCCCeeEEEEEcCh-HHHHHHHHHhhhhh
Q 013210 205 IPELSRLAHDKGVTVVVDNTF-SPLVL-----SPARLGADVVVHSISKFISGGADIIAGAVCGPA-NLVNSMMDLHQGAL 277 (447)
Q Consensus 205 l~~I~~la~~~gi~livD~~~-~~~~~-----~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~-~~~~~l~~~~~~~~ 277 (447)
+++|+++|+++|+++|+|++| .++.. .+.. ++|+++.|+||+++ |.+. |+++.++ ++++.+.......
T Consensus 178 ~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~dv~~~s~sK~l~--G~~g-g~i~~~~~~~~~~l~~~~~~~- 252 (402)
T cd00378 178 FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GADVVTTTTHKTLR--GPRG-GLILTRKGELAKKINSAVFPG- 252 (402)
T ss_pred HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCcEEEeccccCCC--CCCc-eEEEeccHHHHHHHHHHhCcc-
Confidence 999999999999999999997 43321 2223 67999999999984 3343 7777665 8888886554321
Q ss_pred hhcCCC-ccHHHH-HHHHc-cCC-cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013210 278 MLLGPT-MNPKVA-FELSE-RIP-HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLC 353 (447)
Q Consensus 278 ~~~g~~-~~~~~a-~~~~~-~~~-~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 353 (447)
..++. .....+ ..++. ... ...++.+++.++++++.+.|++.++.+..+. ..+.+++
T Consensus 253 -~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~------------------~~~~~v~ 313 (402)
T cd00378 253 -LQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGG------------------TDNHLVL 313 (402)
T ss_pred -ccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecC------------------CCCeEEE
Confidence 12222 122222 11122 222 4556777889999999999998876554211 1245888
Q ss_pred EEeCC-HHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCC----HHHH
Q 013210 354 LDMET-EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGT----LDQR 428 (447)
Q Consensus 354 ~~l~~-~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~----~~~~ 428 (447)
+.++. ......+.+.|.. .| +.+..+.. |..... ......+||++. ..+ .++.
T Consensus 314 v~~~~~~~~~~~~~~~l~~---~g-I~v~~~~~------p~~~~~-----------~~~~~~lRi~~~-~~~~~~~~~~d 371 (402)
T cd00378 314 VDLRPKGITGKAAEDALEE---AG-ITVNKNTL------PWDPSS-----------PFVPSGIRIGTP-AMTTRGMGEEE 371 (402)
T ss_pred EeCCccCCCHHHHHHHHHH---cC-cEEcCCcC------CCCCCC-----------CCCCCeeEecCH-HHHHhCCCHHH
Confidence 88862 1123445555554 23 34332211 211100 012467999987 422 3566
Q ss_pred HHHHHHHHHHh
Q 013210 429 WSQFEKALSRM 439 (447)
Q Consensus 429 i~~l~~al~~~ 439 (447)
++.+.+.|.++
T Consensus 372 i~~~~~~l~~~ 382 (402)
T cd00378 372 MEEIADFIARA 382 (402)
T ss_pred HHHHHHHHHHH
Confidence 66666666654
No 203
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1.1e-22 Score=204.08 Aligned_cols=221 Identities=14% Similarity=0.130 Sum_probs=156.0
Q ss_pred ccccCCCCchHHHHHHHHHHHhC--------CCeEE--EeCChHHHHHHHHH---HhcCCCCeEEEeCCCchhHHHHHHh
Q 013210 91 FIYSRHFNPTVLNLSRQMAALEG--------TEAAY--CTASGMSAISSVLM---QLCSSGGHVVAARTLYGGTHALLTH 157 (447)
Q Consensus 91 ~~~~r~~~~~~~~l~~~ia~l~g--------~~~~~--~tsggt~A~~~al~---~l~~~gd~Vi~~~~~y~~~~~~~~~ 157 (447)
..|+. ..-..++|+.+|+++. .++++ .|+||++|+..+++ +++++||+|++++|+|+.+...+.
T Consensus 66 ~~Y~~--~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~- 142 (404)
T PTZ00376 66 KEYLP--IEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFK- 142 (404)
T ss_pred CCCCC--CCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH-
Confidence 44553 2233578899998752 23466 48999999988764 567899999999999999988773
Q ss_pred hcCcccCeeEEEeCC---C----CHHHHHHhhcc--CCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCC
Q 013210 158 FFPRACNITTTFVDI---S----DHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 158 ~~~~~~g~~~~~v~~---~----d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~ 225 (447)
..|.++..++. + |++.+++++++ ++++++++++||||||.+.+ +++|+++|++||+++|+|++|
T Consensus 143 ----~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y 218 (404)
T PTZ00376 143 ----SAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAY 218 (404)
T ss_pred ----HcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhh
Confidence 36778777765 2 78899888842 35678888999999999986 667888899999999999999
Q ss_pred CCCCCCc--------c---CC-CCeEEEeCCCccccCCCCeeEEEE---EcChHHHHHHH----HHhhhhhhhcC-CCcc
Q 013210 226 SPLVLSP--------A---RL-GADVVVHSISKFISGGADIIAGAV---CGPANLVNSMM----DLHQGALMLLG-PTMN 285 (447)
Q Consensus 226 ~~~~~~~--------~---~~-g~di~~~S~sK~~g~~g~~igG~l---~~~~~~~~~l~----~~~~~~~~~~g-~~~~ 285 (447)
..+.++. . .. ...+++.||||.++.+|+|+ ||+ ++++++++.+. .... . ...+ +...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRv-G~~~~~~~~~~~~~~l~~~~~~~~~-~-~~~~~~~~~ 295 (404)
T PTZ00376 219 QGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERI-GALHIVCANKEEAANVLSQLKLIIR-P-MYSSPPIHG 295 (404)
T ss_pred cCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCccccccccc-ceEEEEeCCHHHHHHHHHHHHHHHh-h-hcCCCchHH
Confidence 7665531 1 11 25799999999999999999 998 57877665443 2222 1 0122 2233
Q ss_pred HHHHHHHHccCC-------cHHHHHHHHHHHHHHHHHHHHhCC
Q 013210 286 PKVAFELSERIP-------HLGLRMKEHCHRALIFARRMKKLG 321 (447)
Q Consensus 286 ~~~a~~~~~~~~-------~l~~~~~~~~~~~~~l~~~L~~~~ 321 (447)
+.++..++.... .+....++++++++.+.+.|++++
T Consensus 296 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 338 (404)
T PTZ00376 296 ARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALG 338 (404)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 444444443211 122334567889999999998874
No 204
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.92 E-value=4.8e-23 Score=203.23 Aligned_cols=296 Identities=16% Similarity=0.134 Sum_probs=193.3
Q ss_pred CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCC---------------eEEEeCCCchhHHHHHHhhcCc
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGG---------------HVVAARTLYGGTHALLTHFFPR 161 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd---------------~Vi~~~~~y~~~~~~~~~~~~~ 161 (447)
..+.++++++.+|+++|++.+++|+|+|+|+++++++++++|| +||++.|.|..+...+.... .
T Consensus 43 ~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~-~ 121 (363)
T TIGR01437 43 IKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMV-R 121 (363)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHH-H
Confidence 4467889999999999999999999999999999999998888 89998866654421111111 2
Q ss_pred ccCeeEEEeCCC---CHHHHHHhhccCCceEEE-EEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCccCCCC
Q 013210 162 ACNITTTFVDIS---DHEMVNSAIVQGRTKVLY-FESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSPARLGA 237 (447)
Q Consensus 162 ~~g~~~~~v~~~---d~~~l~~~i~~~~t~lV~-i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~~~~g~ 237 (447)
..|.++++++.+ |++++++++ +++|++++ +++++||+|.++|+++|+++|++||+++|+|++|+........+|+
T Consensus 122 ~~g~~~v~v~~~~~~d~~~le~ai-~~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~~~~~~~g~ 200 (363)
T TIGR01437 122 LGGGKVVEAGYANECSAEQLEAAI-TEKTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDLQKYYRLGA 200 (363)
T ss_pred hcCCeEEEEcCCCCCCHHHHHHhc-ChhceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCchHHHHHcCC
Confidence 268888887654 899999999 88898765 6788999999999999999999999999999999621122335689
Q ss_pred eEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhh--hcCCCccHHHHHHHHccC-CcHHHHHHHHHHHHHHHH
Q 013210 238 DVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALM--LLGPTMNPKVAFELSERI-PHLGLRMKEHCHRALIFA 314 (447)
Q Consensus 238 di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~--~~g~~~~~~~a~~~~~~~-~~l~~~~~~~~~~~~~l~ 314 (447)
|++++|+||+++++ + +|++++++++++.+.....+... ..+. ........++..+ +...+..+++.++++++.
T Consensus 201 D~~~~S~~K~l~gp--~-~G~l~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~ 276 (363)
T TIGR01437 201 DLVIYSGAKAIEGP--T-SGLVLGKKKYIEWVKLQSKGIGRAMKVGK-ENILGLTAALEQYLSTGKESGAEMVAKLTPFI 276 (363)
T ss_pred CEEEEeCCcccCCC--c-eEEEEEcHHHHHHHHhccCCCcceeccCH-HHHHHHHHHHHHHHccCcccHHHHHHHHHHHH
Confidence 99999999988644 4 49999888888776543321100 0010 1111111111111 112234445556677899
Q ss_pred HHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccccCcccccccc
Q 013210 315 RRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCS 392 (447)
Q Consensus 315 ~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~ 392 (447)
+.|++++. .+..+.-. ....+ .-..+.|... .......+.+.|...+ +.+..- +
T Consensus 277 ~~L~~i~g~~~~~~~~~--~~~~~----------~~~~v~~~~~~~g~~~~~l~~~L~~~~----~~I~~r--------~ 332 (363)
T TIGR01437 277 EALNTLKGVSASIVQDE--AGRDI----------ARAEIRFDESELGMTAADVVQALRQGE----PAIYTR--------G 332 (363)
T ss_pred HHHhcCCCeEEEEecCC--CCCcC----------ceEEEEEeccCCCCCHHHHHHHHhcCC----CCEEEe--------e
Confidence 99988743 44422100 00000 0123555542 1123567777776421 111111 0
Q ss_pred ccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 393 GSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 393 a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
.....+.+|+++. .-+ +++++.+.++|+++
T Consensus 333 ---------------~~~~~~~~~l~~~-~~~-~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 333 ---------------YKANEGIIEIDPR-SVT-GGQLDIIVERIREI 362 (363)
T ss_pred ---------------eeecCCeEEEEee-cCC-HHHHHHHHHHHHHh
Confidence 1234678999999 655 88899999998765
No 205
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.92 E-value=7.5e-23 Score=201.77 Aligned_cols=303 Identities=17% Similarity=0.180 Sum_probs=204.0
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHh-cCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC---
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 173 (447)
.+...++++.+++++|.+.+++++||++|+..++.++ +++||+|+++.++|+++...+. ..|.++.+++.+
T Consensus 17 ~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~ 91 (352)
T cd00616 17 GPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAIL-----LLGATPVFVDIDPDT 91 (352)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHH-----HcCCeEEEEecCCCc
Confidence 5678999999999999999999999999999999988 5889999999999998877663 257788877653
Q ss_pred ---CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCC-CCCCCcc--CCCCeEEEeCCC--
Q 013210 174 ---DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PLVLSPA--RLGADVVVHSIS-- 245 (447)
Q Consensus 174 ---d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~~~~~~--~~g~di~~~S~s-- 245 (447)
|++++++.+ ++++++|+++ |++|.+.|+++|.++|+++|+++|+|++|+ +...... ....|+.+.|++
T Consensus 92 ~~~d~~~l~~~i-~~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~ 167 (352)
T cd00616 92 YNIDPELIEAAI-TPRTKAIIPV---HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHPT 167 (352)
T ss_pred CCcCHHHHHHhc-CcCCeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCCC
Confidence 789999988 7789999875 468999999999999999999999999993 2222221 122588888876
Q ss_pred ccccCCCCeeEEEEEcC-hHHHHHHHHHhhhhhhh-----------cCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHH
Q 013210 246 KFISGGADIIAGAVCGP-ANLVNSMMDLHQGALML-----------LGPTMNPKVAFELSERIPHLGLRMKEHCHRALIF 313 (447)
Q Consensus 246 K~~g~~g~~igG~l~~~-~~~~~~l~~~~~~~~~~-----------~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l 313 (447)
|+++++ .||+++.+ +++.+.++..+...... ....++...+...+..++.+....++.+++.+++
T Consensus 168 K~~~~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~ 244 (352)
T cd00616 168 KNLTTG---EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAERY 244 (352)
T ss_pred CCCccc---CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999533 25777654 67777776543311100 1123344445444444555666777788899999
Q ss_pred HHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhhcccccccccccccCcccccc
Q 013210 314 ARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQNYAQFGFMAVSLGYYETLMS 390 (447)
Q Consensus 314 ~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~ 390 (447)
.+.|++.+ .++..+..... ....++.|.+++ ......+.+.|... | +.+ +..+.-..
T Consensus 245 ~~~L~~~~g~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~v~~~L~~~---g-I~~--~~~~~~~~ 304 (352)
T cd00616 245 KELLADLPGIRLPDVPPGVK--------------HSYHLYVIRLDPEAGESRDELIEALKEA---G-IET--RVHYPPLH 304 (352)
T ss_pred HHHhcCCCCccCCCCCCCCc--------------eeeEEEEEEECCcCCCCHHHHHHHHHHC---C-CCe--eeecCccc
Confidence 99998864 35443321000 123488888863 33456777777752 2 222 21111110
Q ss_pred cccc-c-----cCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013210 391 CSGS-S-----TSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 437 (447)
Q Consensus 391 ~~a~-~-----~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 437 (447)
+... . .....+.... +..+.||++++ ...++++++.+.++|+
T Consensus 305 ~~~~~~~~~~~~~~~~~~a~~----~~~~~l~l~~~-~~~t~~di~~i~~~l~ 352 (352)
T cd00616 305 HQPPYKKLLGYPPGDLPNAED----LAERVLSLPLH-PSLTEEEIDRVIEALR 352 (352)
T ss_pred cCHhhhhccCCCcCCChHHHH----HHhCeEEccCC-CCCCHHHHHHHHHHhC
Confidence 0000 0 0001111111 22478999999 9999999999988873
No 206
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.92 E-value=2.5e-23 Score=187.40 Aligned_cols=310 Identities=19% Similarity=0.232 Sum_probs=221.4
Q ss_pred ccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC-CCCeE
Q 013210 63 EASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCS-SGGHV 141 (447)
Q Consensus 63 ~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~-~gd~V 141 (447)
.+|.|++.|+.+++.++.+... +...||. +++..+||+++|+++|.|..+|++|||.+|.++++.-+. +|..|
T Consensus 26 LRSDTvT~PTdeMr~am~eA~v----gDdVyGe--D~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~rg~ei 99 (384)
T KOG1368|consen 26 LRSDTVTVPTDEMRRAMAEASV----GDDVYGE--DPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQRGSEI 99 (384)
T ss_pred cccccccCChHHHHHHHhhccc----CcccccC--CccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcCCCceE
Confidence 4789999998888877777663 3467774 677889999999999999999999999999999998765 88999
Q ss_pred EEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhcc-------CCceEEEEEcCCCCCc-cccCHH--
Q 013210 142 VAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQ-------GRTKVLYFESISNPTL-AVANIP-- 206 (447)
Q Consensus 142 i~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~-------~~t~lV~i~~~~NptG-~v~~l~-- 206 (447)
|+.+..|--.++.- -+....|+.++.+... +++++++++.. +.|++|++|+.+|.+| .+.|++
T Consensus 100 i~gd~~HI~~~E~g--g~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~ 177 (384)
T KOG1368|consen 100 IVGDRAHIHRYEQG--GISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEEL 177 (384)
T ss_pred Eeccchheeehhcc--ChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHH
Confidence 99988774333322 1112246666555432 89999999842 3489999999888777 888866
Q ss_pred -HHHHHHHhcCCEEEEeCCC---CC--CCCCccCC--CCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhh
Q 013210 207 -ELSRLAHDKGVTVVVDNTF---SP--LVLSPARL--GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALM 278 (447)
Q Consensus 207 -~I~~la~~~gi~livD~~~---~~--~~~~~~~~--g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~ 278 (447)
+|.+||+++|+.+|+|.+- +. ......++ -.|-+..++||.+|.| +|.+++++++++++.+.+|.
T Consensus 178 ~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAP---VGSViVG~k~FI~kA~~~RK---- 250 (384)
T KOG1368|consen 178 DRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAP---VGSVIVGSKDFIDKARHFRK---- 250 (384)
T ss_pred HHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCC---cccEEEccHHHHHHHHHHHH----
Confidence 6788999999999999873 11 11222222 4688999999999987 67888999999999888877
Q ss_pred hcCCCccHH--HHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013210 279 LLGPTMNPK--VAFELSERIPHLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 355 (447)
Q Consensus 279 ~~g~~~~~~--~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 355 (447)
..|+.+.+. .|++++-.+.+....+++-.+++..+++.+...+ +++..|..+. .++.+.
T Consensus 251 alGGGmRQsGvLaaaaLval~~~~~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~et------------------Niv~~~ 312 (384)
T KOG1368|consen 251 ALGGGMRQSGVLAAAALVALDENVPLLRADHKRAKELAEYINTPEEIRVEVPAVET------------------NIVNMV 312 (384)
T ss_pred HhcCchhHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhccccceeeecchhhc------------------ceeeee
Confidence 445544433 3333344444433366677788888999998776 4777664222 267766
Q ss_pred eC-CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 013210 356 ME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEK 434 (447)
Q Consensus 356 l~-~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~ 434 (447)
+. ..-.++.+.+.+++. |++. |+-....+||.+. +.-+++.++.+..
T Consensus 313 l~q~~~~~~~l~~~~~k~---gi~l----------------------------m~~~s~r~Rivlh-~Qvt~~~ve~~~~ 360 (384)
T KOG1368|consen 313 LCQARLTAEELCKFLEKN---GILL----------------------------MGGASRRIRIVLH-HQVTDEDVEYVKS 360 (384)
T ss_pred cccccCCHHHHHHHHHHC---CeEE----------------------------eeccccceEEEEE-EecCHHHHHHHHH
Confidence 64 222467788877762 3211 1112244999999 8888888888888
Q ss_pred HHH
Q 013210 435 ALS 437 (447)
Q Consensus 435 al~ 437 (447)
+|+
T Consensus 361 ~~~ 363 (384)
T KOG1368|consen 361 VLS 363 (384)
T ss_pred HHH
Confidence 774
No 207
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.92 E-value=7.6e-23 Score=205.11 Aligned_cols=289 Identities=17% Similarity=0.186 Sum_probs=193.2
Q ss_pred CCCCchHHHHHHHHHHHhCC---CeEEEeCChHHHHHHHHHHhcCCC-CeEEEeCCCchhHHHHHHhhcC--------cc
Q 013210 95 RHFNPTVLNLSRQMAALEGT---EAAYCTASGMSAISSVLMQLCSSG-GHVVAARTLYGGTHALLTHFFP--------RA 162 (447)
Q Consensus 95 r~~~~~~~~l~~~ia~l~g~---~~~~~tsggt~A~~~al~~l~~~g-d~Vi~~~~~y~~~~~~~~~~~~--------~~ 162 (447)
++.++...++++.++++.+. +.++|++||++|+..+++.+..+| ++|+..++.|+++......... ..
T Consensus 81 ~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 160 (398)
T PRK03244 81 LFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEP 160 (398)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCC
Confidence 34556667899999999875 479999999999999998766565 5788888888877543321100 00
Q ss_pred cCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCC-------C
Q 013210 163 CNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVL-------S 231 (447)
Q Consensus 163 ~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~-------~ 231 (447)
.+..+..++..|++++++.+ .+++++|++++++||+|.+.| +++|.++|++||+++|+||+|+++.. .
T Consensus 161 ~~~~~~~~~~~d~~~l~~~~-~~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~ 239 (398)
T PRK03244 161 LPGGVEHVPYGDVDALAAAV-DDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQ 239 (398)
T ss_pred CCCCceEeCCCCHHHHHHhh-cCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhh
Confidence 12345666667999999988 678999999999999999987 88999999999999999999965432 1
Q ss_pred ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHH
Q 013210 232 PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRAL 311 (447)
Q Consensus 232 ~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~ 311 (447)
......|++ +++|.++ +|.++ |+++.++++++.+..... ..+..++.+.+.++...+..+.. ....++..++.+
T Consensus 240 ~~~~~pDi~--t~sK~l~-~G~~i-g~~~~~~~~~~~~~~~~~-~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~ 313 (398)
T PRK03244 240 HDGVTPDVV--TLAKGLG-GGLPI-GACLAFGPAADLLTPGLH-GSTFGGNPVACAAALAVLDTIAS-EGLLENAERLGE 313 (398)
T ss_pred hhCCCCCEE--EEchhhh-CCccc-EEEEEcHHHHhhccCCCC-cCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHH
Confidence 112235655 6889999 67898 888888888777654222 11233334444444444332221 134566677788
Q ss_pred HHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccc
Q 013210 312 IFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSC 391 (447)
Q Consensus 312 ~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~ 391 (447)
+|.+.|++.+..+. .. ..|.|.+++++++.. .+..+.+++... |+ .++..
T Consensus 314 ~l~~~L~~~~~~~~----~~-------------v~g~g~~~~i~~~~~-~~~~~~~~l~~~---Gv-~~~~~-------- 363 (398)
T PRK03244 314 QLRAGIEALGHPLV----DH-------------VRGRGLLLGIVLTAP-VAKAVEAAAREA---GF-LVNAV-------- 363 (398)
T ss_pred HHHHHHHhcCCCce----ee-------------EeeccEEEEEEEecc-HHHHHHHHHHHC---Ce-EEeec--------
Confidence 89999987532111 00 114678999999643 356777777652 32 22110
Q ss_pred cccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 392 SGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 392 ~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
..+.||||+. ...++++++.+.++|+++-
T Consensus 364 -------------------~~~~iR~~p~-~~~t~~~i~~~~~~l~~~l 392 (398)
T PRK03244 364 -------------------APDVIRLAPP-LIITDAQVDAFVAALPAIL 392 (398)
T ss_pred -------------------CCCEEEEECC-CcCCHHHHHHHHHHHHHHH
Confidence 1367999988 6555666666666665543
No 208
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.92 E-value=9.9e-23 Score=204.06 Aligned_cols=214 Identities=15% Similarity=0.106 Sum_probs=150.2
Q ss_pred HHHHHHHHHHHhC--------CCeE--EEeCChHHHHHHHHHHh--cCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEE
Q 013210 101 VLNLSRQMAALEG--------TEAA--YCTASGMSAISSVLMQL--CSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 168 (447)
Q Consensus 101 ~~~l~~~ia~l~g--------~~~~--~~tsggt~A~~~al~~l--~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~ 168 (447)
..++|+.+++++. .+.+ ++|+|+++|+.++++.+ +.+||.|++++|.|+.+...+. ..|.+++
T Consensus 71 ~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~-----~~g~~~v 145 (396)
T PRK09257 71 LAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFE-----AAGLEVK 145 (396)
T ss_pred CHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHH-----HcCCcEE
Confidence 3578888888751 2345 89999999999998765 4799999999999999988773 2577777
Q ss_pred EeCC-------CCHHHHHHhhcc--CCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc----
Q 013210 169 FVDI-------SDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP---- 232 (447)
Q Consensus 169 ~v~~-------~d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~---- 232 (447)
.++. .|+++++++++. +++.++++++||||||.+.+ +++|+++|++||+++|+|++|..+.++.
T Consensus 146 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~ 225 (396)
T PRK09257 146 TYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDA 225 (396)
T ss_pred EEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHH
Confidence 6653 178899888732 34567777999999999986 6688899999999999999997665421
Q ss_pred ------cC-CCCeEEEeCCCccccCCCCeeEEEEE--c-ChHHHH----HHHHHhhhhhhhcCCCccHHHHHHHHccC--
Q 013210 233 ------AR-LGADVVVHSISKFISGGADIIAGAVC--G-PANLVN----SMMDLHQGALMLLGPTMNPKVAFELSERI-- 296 (447)
Q Consensus 233 ------~~-~g~di~~~S~sK~~g~~g~~igG~l~--~-~~~~~~----~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-- 296 (447)
.. ....+++.||||.++++|+|+ ||++ . +++.+. .+..... ......+...+..+...+..-
T Consensus 226 ~~~~~~~~~~~~vi~i~SfSK~~~~~GlRi-G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~ 303 (396)
T PRK09257 226 YGLRAFAAAGLELLVASSFSKNFGLYGERV-GALSVVAEDAEEADRVLSQLKATIR-TNYSNPPAHGAAIVATILNDPEL 303 (396)
T ss_pred HHHHHHHhcCCcEEEEEEcCCcCccccccc-eeEEEEeCCHHHHHHHHHHHHHHhh-hhcCCCcHHHHHHHHHHhCCHHH
Confidence 11 135799999999999999999 9986 2 444333 3322222 100111223333333333321
Q ss_pred -----CcHHHHHHHHHHHHHHHHHHHHhCC
Q 013210 297 -----PHLGLRMKEHCHRALIFARRMKKLG 321 (447)
Q Consensus 297 -----~~l~~~~~~~~~~~~~l~~~L~~~~ 321 (447)
+++....++++++++.+.+.|++++
T Consensus 304 ~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~ 333 (396)
T PRK09257 304 RAEWEAELEEMRERIKAMRQLLVEALKAKG 333 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 2233456678899999999998874
No 209
>PRK02769 histidine decarboxylase; Provisional
Probab=99.92 E-value=7.6e-23 Score=201.69 Aligned_cols=246 Identities=15% Similarity=0.124 Sum_probs=180.4
Q ss_pred CCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC--e--EEEeCChHHHHHHHHHHh--cCCCCeEEEe
Q 013210 71 MEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE--A--AYCTASGMSAISSVLMQL--CSSGGHVVAA 144 (447)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~--~--~~~tsggt~A~~~al~~l--~~~gd~Vi~~ 144 (447)
...+++.......+|||++.+.|++......+++.+.+|+++|++ . .+||+||||||..++... ..++++|+++
T Consensus 37 ~~~~~~~~~~~~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s 116 (380)
T PRK02769 37 SALKRFFSFSINNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYS 116 (380)
T ss_pred HHHHHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeC
Confidence 345677777777789999999999988888889999999999974 3 489999999998887654 2467899999
Q ss_pred CCCchhHHHHHHhhcCcccCeeEEEeCC--C---CHHHHHHhhccCC---ceEEEEEcCCCCCccccCHHHHHHHHHhcC
Q 013210 145 RTLYGGTHALLTHFFPRACNITTTFVDI--S---DHEMVNSAIVQGR---TKVLYFESISNPTLAVANIPELSRLAHDKG 216 (447)
Q Consensus 145 ~~~y~~~~~~~~~~~~~~~g~~~~~v~~--~---d~~~l~~~i~~~~---t~lV~i~~~~NptG~v~~l~~I~~la~~~g 216 (447)
+.+|+++...+. .+ |++...++. + |+++|++++ +++ |.+|+++.++|++|.+.|+++|+++|+++|
T Consensus 117 ~~~H~Sv~ka~~-~l----g~~~~~V~~~~~g~id~~~L~~~i-~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g 190 (380)
T PRK02769 117 KDTHYSVSKIAR-LL----RIKSRVITSLPNGEIDYDDLISKI-KENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIG 190 (380)
T ss_pred CCceehHHHHHH-Hc----CCCCceeccCCCCcCcHHHHHHHH-HhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhC
Confidence 999999988873 32 333333332 2 899999999 544 899999999999999999999999999998
Q ss_pred ---CEEEEeCCCCCCC---------CCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhh----hhhhhc
Q 013210 217 ---VTVVVDNTFSPLV---------LSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ----GALMLL 280 (447)
Q Consensus 217 ---i~livD~~~~~~~---------~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~----~~~~~~ 280 (447)
+++|+|.+|+.+. ++... ++|.++.|.||++++|-. + |+++.+++..+.+..... ......
T Consensus 191 ~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g-~-G~l~~r~~~~~~~~~~~~yl~~~d~t~~ 267 (380)
T PRK02769 191 IDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMP-C-GIVLAKKKYVERISVDVDYIGSRDQTIS 267 (380)
T ss_pred CCceEEEEEecccceeecccCccccCCccC-CCCEEEECCcccCCCCCC-c-EEEEEehhhhhhcccCccccCCCCCCcc
Confidence 6999999994432 22233 899999999999984433 4 777777666555421101 001123
Q ss_pred CCCc--cHHHHHHHHccC--CcHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 013210 281 GPTM--NPKVAFELSERI--PHLGLRMKEHCHRALIFARRMKKLGLKVL 325 (447)
Q Consensus 281 g~~~--~~~~a~~~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~~~v~ 325 (447)
|+.. .....+..++.+ ..+.+..++..++++++.+.|++.+.++.
T Consensus 268 GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~ 316 (380)
T PRK02769 268 GSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAW 316 (380)
T ss_pred CCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 3332 233444444433 33566778889999999999988877544
No 210
>PLN02672 methionine S-methyltransferase
Probab=99.92 E-value=1.4e-22 Score=217.65 Aligned_cols=217 Identities=15% Similarity=0.148 Sum_probs=161.0
Q ss_pred HHHHHHHHHHHhCC--C---eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC--
Q 013210 101 VLNLSRQMAALEGT--E---AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-- 173 (447)
Q Consensus 101 ~~~l~~~ia~l~g~--~---~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-- 173 (447)
.+.+.+.+++..|. + .+++++|+++++..++++++++||.|+++.|+|+.+...+. ..|.++..++.+
T Consensus 736 r~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~-----~~Ga~vv~Vpl~~e 810 (1082)
T PLN02672 736 RPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAK-----FLKANFRRIPTKSS 810 (1082)
T ss_pred HHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHH-----HcCCEEEEEecccc
Confidence 56788888887664 2 58999999999999999999999999999999999988873 357777777653
Q ss_pred -----CHHHHHHhhccC-CceEEEEEcCC-CCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCcc----------
Q 013210 174 -----DHEMVNSAIVQG-RTKVLYFESIS-NPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSPA---------- 233 (447)
Q Consensus 174 -----d~~~l~~~i~~~-~t~lV~i~~~~-NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~~---------- 233 (447)
|+++|++++ ++ +.++|++++|| ||||.+.+ +++|+++|++||++||+||+|..+.++..
T Consensus 811 ~gf~lD~d~Le~al-~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~ 889 (1082)
T PLN02672 811 DGFKLTAKTLASTL-ETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSI 889 (1082)
T ss_pred cCCCCCHHHHHHHh-ccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhH
Confidence 678899988 44 45689999997 99999986 66888889999999999999975554311
Q ss_pred --CC------CCeEEEeCCCccccCCCCeeEEEEEcCh-HHHHHHHHHhhhhhhhcCCCccHHHHHHHHc-----cC---
Q 013210 234 --RL------GADVVVHSISKFISGGADIIAGAVCGPA-NLVNSMMDLHQGALMLLGPTMNPKVAFELSE-----RI--- 296 (447)
Q Consensus 234 --~~------g~di~~~S~sK~~g~~g~~igG~l~~~~-~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~-----~~--- 296 (447)
.+ ...+++.|+||.++.+|+|+ ||+++++ ++++.+..... . .......+.++..++. ..
T Consensus 890 l~~~~~~sks~nVIvL~SfSKkf~lpGLRI-GylIap~~eLi~~l~~~~~-~--s~~~~~~q~Aaaaalall~~~~~~~~ 965 (1082)
T PLN02672 890 LSRLKSSNPSFAVALLGGLSTELLSGGHEF-GFLALNDSVLIDAFHSAPG-L--SRPHSTLKYTIKKLLGLKNQKSSDLL 965 (1082)
T ss_pred HHHhccccCCceEEEEeCcHHhhccHHHHh-eeEEeCCHHHHHHHHHhhh-h--cCCCcHHHHHHHHHHHHHhccCcHHH
Confidence 01 14688999999999999999 9999864 58888876533 1 1122223333322221 11
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 013210 297 PHLGLRMKEHCHRALIFARRMKKLGLKVLYP 327 (447)
Q Consensus 297 ~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p 327 (447)
+.+.+..+.+.++++++.+.|++++..+..|
T Consensus 966 ~~l~e~r~~Lk~rRd~L~e~L~~~Gi~v~~P 996 (1082)
T PLN02672 966 DGVAEQKKILKSRAERLKETLEACGWDVLEP 996 (1082)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCeEecC
Confidence 1234455668899999999999887665544
No 211
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.92 E-value=6.5e-23 Score=205.23 Aligned_cols=286 Identities=13% Similarity=0.173 Sum_probs=192.9
Q ss_pred CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC---------CC-CeEEEeCCCchhHHHHHHhhcC-----c
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCS---------SG-GHVVAARTLYGGTHALLTHFFP-----R 161 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~---------~g-d~Vi~~~~~y~~~~~~~~~~~~-----~ 161 (447)
.++...+++++++++.+.+.++|++||++|+..+++.... +| ++||.....||+.......... .
T Consensus 80 ~~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~ 159 (396)
T PRK04073 80 HSDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKR 159 (396)
T ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCccccc
Confidence 4566688999999999888999999999999999986531 34 6789888888875432211110 0
Q ss_pred ccC---eeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCC---
Q 013210 162 ACN---ITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLS--- 231 (447)
Q Consensus 162 ~~g---~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~--- 231 (447)
..+ ..+..++..|++++++.+ ++++++|++++++||+|.+.| +++|.++|++||+++|+||+|+++...
T Consensus 160 ~~~~~~~~~~~~~~~d~~~l~~~i-~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~ 238 (396)
T PRK04073 160 GFGPMLPGIKKIPYGDLEALKAAI-TPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKL 238 (396)
T ss_pred CCCCCCCCceEeCCCCHHHHHHhc-ccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHH
Confidence 000 124556777999999999 778999999999999999976 889999999999999999999655321
Q ss_pred ----ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHH
Q 013210 232 ----PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHC 307 (447)
Q Consensus 232 ----~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~ 307 (447)
......|+++ ++|.+|++|.++ |++++++++++.+..... ..+..++...+.++.+.+..++. ....++..
T Consensus 239 ~~~~~~~~~pdi~~--~sK~lg~gg~~i-g~~~~~~~i~~~~~~~~~-~~t~~~~~~~~aaa~aaL~~~~~-~~l~~~~~ 313 (396)
T PRK04073 239 FACDWDNVTPDMYI--LGKALGGGVFPI-SCVAANRDILGVFTPGSH-GSTFGGNPLACAVSIAALEVLEE-EKLPERSL 313 (396)
T ss_pred HHhhhcCCCCCEEE--ecccccCCCCcc-eEEEEcHHHHhhhcCCCC-CCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHH
Confidence 1222356554 789999888998 899999999887754322 12233444444444444432211 12335566
Q ss_pred HHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccc
Q 013210 308 HRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYET 387 (447)
Q Consensus 308 ~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s 387 (447)
++++++.+.|++++. +.+... .+.|.++.+.++. .+..+.+.|... |+ .+.
T Consensus 314 ~~~~~l~~~L~~l~~----~~i~~~-------------~~~g~~~~~~~~~--~~~~~~~~l~~~---Gv-~~~------ 364 (396)
T PRK04073 314 ELGEYFKEQLKEIDN----PMIKEV-------------RGRGLFIGVELNE--PARPYCEALKEE---GL-LCK------ 364 (396)
T ss_pred HHHHHHHHHHHhhcC----Ccccce-------------ecceEEEEEEecc--hHHHHHHHHHHC---Ce-EEe------
Confidence 778888888887532 111111 1467789998864 245677777652 32 211
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 388 LMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 388 ~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+ ..++.|||++. ...+++.++.+.++|+++
T Consensus 365 ----~-----------------~~~~~iRi~p~-l~~t~e~i~~~~~~l~~~ 394 (396)
T PRK04073 365 ----E-----------------THETVIRFAPP-LVITKEELDWAFEKIKAV 394 (396)
T ss_pred ----c-----------------CCCCEEEEECC-cccCHHHHHHHHHHHHHH
Confidence 0 01368999987 667777777777777653
No 212
>PRK10534 L-threonine aldolase; Provisional
Probab=99.91 E-value=2e-22 Score=197.20 Aligned_cols=276 Identities=17% Similarity=0.186 Sum_probs=183.0
Q ss_pred CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC---
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 173 (447)
.++...+|++.||+++|.+.+++++||++++..++.+++.+||+|+++.+.|...+... .. ....+.++..++.+
T Consensus 32 ~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~ 109 (333)
T PRK10534 32 DDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLYEAG-GA-AVLGSIQPQPIDAAADG 109 (333)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhcCCCCeeEEechhhhhHhcCC-ch-HHhcCceEEeecCCCCC
Confidence 57888999999999999999999999999999999888999999999888775333211 00 01012455555432
Q ss_pred --CHHHHHHhhccC------CceEEEEEcCCCCCccccCHH---HHHHHHHhcCCEEEEeCCCCCC-----CCCccC--C
Q 013210 174 --DHEMVNSAIVQG------RTKVLYFESISNPTLAVANIP---ELSRLAHDKGVTVVVDNTFSPL-----VLSPAR--L 235 (447)
Q Consensus 174 --d~~~l~~~i~~~------~t~lV~i~~~~NptG~v~~l~---~I~~la~~~gi~livD~~~~~~-----~~~~~~--~ 235 (447)
|+++|++++ ++ ++++|++++|+ +|.+.|.+ +|.++|+++++++++||+|... ...... .
T Consensus 110 ~~d~~~l~~~i-~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~ 186 (333)
T PRK10534 110 TLPLDKVAAKI-KPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQ 186 (333)
T ss_pred CCCHHHHHHhh-cccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHh
Confidence 799999988 54 68999999765 59998865 5567889999999999986311 111111 1
Q ss_pred CCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCcc--HHHHHHHHccCCcHHHHHHHHHHHHHHH
Q 013210 236 GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMN--PKVAFELSERIPHLGLRMKEHCHRALIF 313 (447)
Q Consensus 236 g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~--~~~a~~~~~~~~~l~~~~~~~~~~~~~l 313 (447)
..|.++.|+||.+|.+ +||++++++++++.++..+. ..+.... ...+......++...+++++..++++++
T Consensus 187 ~~~~~~~s~SK~~~~~---~G~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l 259 (333)
T PRK10534 187 YCDSFTICLSKGLGTP---VGSLLVGNRDYIKRARRWRK----MTGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWL 259 (333)
T ss_pred cCCEEEEEeEcCCCCc---ccceEEcCHHHHHHHHHHHH----HhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 2466667999999864 55588899999999987765 2232221 1112222222333334555666678899
Q ss_pred HHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccc
Q 013210 314 ARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSG 393 (447)
Q Consensus 314 ~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a 393 (447)
.+.|++.++++..| .+.++++.+++. ....+.+.|... | +.+..|
T Consensus 260 ~~~L~~~g~~~~~~--------------------~~nfv~~~~~~~-~~~~~~~~l~~~---g-i~v~~~---------- 304 (333)
T PRK10534 260 AEQLREAGADVMRQ--------------------DTNMLFVRVGEE-QAAALGEYMRER---N-VLINAS---------- 304 (333)
T ss_pred HHHHHhCCCccCCC--------------------CceEEEEECCch-hHHHHHHHHHHc---C-eeecCC----------
Confidence 99999887654322 244888888642 345666777653 3 333222
Q ss_pred cccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 394 SSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 394 ~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
..+|++.. .-.+.+.++.+.++|+++
T Consensus 305 -------------------~~~rl~~~-~r~t~e~~~~~~~~l~~~ 330 (333)
T PRK10534 305 -------------------PIVRLVTH-LDVSREQLAEVVAHWRAF 330 (333)
T ss_pred -------------------ceEEEEEE-eCCCHHHHHHHHHHHHHH
Confidence 13677765 444566677777776644
No 213
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.91 E-value=1.4e-22 Score=205.34 Aligned_cols=144 Identities=13% Similarity=0.212 Sum_probs=116.8
Q ss_pred eEEEeCChHHHHHHHHHH-----hcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC------------CHHHH
Q 013210 116 AAYCTASGMSAISSVLMQ-----LCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS------------DHEMV 178 (447)
Q Consensus 116 ~~~~tsggt~A~~~al~~-----l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~------------d~~~l 178 (447)
++++|+|+++|+..++.+ ++.+||+|++..|.|+.+...+. .. . .|.+++.++.+ |.+++
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~-l~-~-~g~~vv~i~~~~~~~~g~~~~~~d~~~l 233 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPE-LP-R-YDFEVVRIKADEMTEDGTHTWQYPDKEL 233 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHH-Hh-c-CCcEEEEeecccccccccccCCCCHHHH
Confidence 699999999999999877 68899999999999999887752 11 1 36666655431 56889
Q ss_pred HHhhccCCceEEEEEcCCCCCccccC---HHHHHHHHHhc--CCEEEEeCCCCCCCCCcc---CC--CCeEEEeCCCccc
Q 013210 179 NSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDK--GVTVVVDNTFSPLVLSPA---RL--GADVVVHSISKFI 248 (447)
Q Consensus 179 ~~~i~~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~--gi~livD~~~~~~~~~~~---~~--g~di~~~S~sK~~ 248 (447)
++++ ++++++|++++|+||||.+.+ +++|+++|++| ++++|+||+|..+..+.. .. ...+++.|+||.|
T Consensus 234 ~~~~-~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~f 312 (521)
T TIGR03801 234 EKLR-DPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYF 312 (521)
T ss_pred HHhc-CCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhc
Confidence 8877 789999999999999999987 67788889886 999999999965543211 11 3679999999999
Q ss_pred cCCCCeeEEEEEcChH
Q 013210 249 SGGADIIAGAVCGPAN 264 (447)
Q Consensus 249 g~~g~~igG~l~~~~~ 264 (447)
|.+|+|+ ||++.+++
T Consensus 313 g~~G~Rl-G~i~~~~~ 327 (521)
T TIGR03801 313 GATGWRL-GTIALHKD 327 (521)
T ss_pred cCchhhh-hhhhcCch
Confidence 9999999 99988754
No 214
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.91 E-value=1.9e-22 Score=202.32 Aligned_cols=349 Identities=16% Similarity=0.151 Sum_probs=212.1
Q ss_pred CCCCchhhHhhhcCCCCCCCCccccccccccccccCCH-HHHHHhhcCCCCCCCCCccccCC--CCchHHHHHH----HH
Q 013210 36 AAWEDPAAALASARHEFGEHGGVNMSIEASATFTVMEP-ETMRRMFAGELGPDRDFFIYSRH--FNPTVLNLSR----QM 108 (447)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~--~~~~~~~l~~----~i 108 (447)
++..||+..-+--..... ..-.-++..|.+++.|.+ +.+...+...|+. ++.++|. +++.++++|+ ++
T Consensus 9 ~~~~~~~~~~~~~~~~~~--~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~---g~~gsr~~~G~~~~~~lE~~~~~~l 83 (416)
T PRK13034 9 LEEYDDEVFAAINKELER--QQDHLELIASENFTSPAVMEAQGSVLTNKYAE---GYPGKRYYGGCEFVDEVEALAIERA 83 (416)
T ss_pred HhhhCHHHHHHHHHHHHH--HhcCeeecccccCCCHHHHHHhcchhhcCCCC---CCCCCcccCCChHHHHHHHHHHHHH
Confidence 555667554332221211 123446688888988877 6666665455543 2233343 4688899999 99
Q ss_pred HHHhCCCeEE-EeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCe--eEEEeCC------CCHHHHH
Q 013210 109 AALEGTEAAY-CTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNI--TTTFVDI------SDHEMVN 179 (447)
Q Consensus 109 a~l~g~~~~~-~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~--~~~~v~~------~d~~~l~ 179 (447)
|+++|.+.++ +++||+.|+..++.+++++||+|+++...|.+.... ...+...+. +...++. .|+++++
T Consensus 84 a~l~g~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 161 (416)
T PRK13034 84 KQLFGCDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTH--GAKVSLSGKWYNAVQYGVDRLTGLIDYDEVE 161 (416)
T ss_pred HHHhCCCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeec--CCcceeccceeeeEEcccccccCCcCHHHHH
Confidence 9999999885 569999999999999999999999999998773211 000000111 1123333 4889999
Q ss_pred HhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCC-----CccCCCCeEEEeCCCccccCCCC
Q 013210 180 SAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVL-----SPARLGADVVVHSISKFISGGAD 253 (447)
Q Consensus 180 ~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~-----~~~~~g~di~~~S~sK~~g~~g~ 253 (447)
+.++..++++|+++.+. .|...|+++|.++|+++|+++++|++| .+... .+.. ++|++++|+||+++++.
T Consensus 162 ~~l~~~~~klVi~~~~~--~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~-~~Di~~~s~~K~l~g~~- 237 (416)
T PRK13034 162 ELAKEHKPKLIIAGFSA--YPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFP-HAHVVTTTTHKTLRGPR- 237 (416)
T ss_pred HHHhhcCCeEEEECCCc--cccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCC-CceEEEEeCcccCCCCC-
Confidence 88844568899886543 578889999999999999999999997 22221 1222 58999999999996553
Q ss_pred eeEEEEEcCh-HHHHHHHHHhhhhhhhcCCCccHHHHHH--HHccC-CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCC
Q 013210 254 IIAGAVCGPA-NLVNSMMDLHQGALMLLGPTMNPKVAFE--LSERI-PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGL 329 (447)
Q Consensus 254 ~igG~l~~~~-~~~~~l~~~~~~~~~~~g~~~~~~~a~~--~~~~~-~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~ 329 (447)
||++++++ ++.+.++...... ...+..+...++.. +...+ ....++.+++.++.++|++.|++.|+.+..+.
T Consensus 238 --GG~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~- 313 (416)
T PRK13034 238 --GGMILTNDEEIAKKINSAVFPG-LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYDLVSGG- 313 (416)
T ss_pred --CeEEEECcHHHHHHHHhhcCCc-ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCEeccCC-
Confidence 57776654 4445554432211 01112222222211 12122 12334568889999999999998887665331
Q ss_pred CCCchhHHHHHHhccCCCcCcEEEEEeCCHH-HHHHHHHHhhcccccccccccc-cCccccccccccccCCCCCHHHHHh
Q 013210 330 EDHPHHELLKSMANKEYGFGGLLCLDMETEE-KANRLMNYLQNYAQFGFMAVSL-GYYETLMSCSGSSTSSELNAEEKAL 407 (447)
Q Consensus 330 ~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~-~~~~l~~~l~~~~~~g~~~vs~-G~~~s~~~~~a~~~~~~~~~~~~~~ 407 (447)
.. ..++.+.+.... ....+.+.|... | +.++. +.. ..+.+|.
T Consensus 314 ~~-----------------t~i~~v~~~~~~~~~~~~~~~L~~~---G-I~v~~~~~p-~~~~~p~-------------- 357 (416)
T PRK13034 314 TD-----------------NHLLLVDLRPKGLSGKDAEQALERA---G-ITVNKNTVP-GDTESPF-------------- 357 (416)
T ss_pred CC-----------------CcEEEEEcCCCCCCHHHHHHHHHhC---C-cEEeccCCC-CCCcCCC--------------
Confidence 11 227777776322 234455666642 3 22221 100 0000111
Q ss_pred cCCCCCeEEEEeCCC----CCHHHHHHHHHHHHHHh
Q 013210 408 AGISAGLVRMSVGYL----GTLDQRWSQFEKALSRM 439 (447)
Q Consensus 408 ~g~~~~~iRiS~g~~----~~~~~~i~~l~~al~~~ 439 (447)
+ +..||+|+. . ..++++++.+.++|+++
T Consensus 358 --~-~~~lR~~~~-~~t~~~~~~~di~~l~~~l~~~ 389 (416)
T PRK13034 358 --V-TSGIRIGTP-AGTTRGFGEAEFREIANWILDV 389 (416)
T ss_pred --C-CCeeEeCcH-HHHhCCCCHHHHHHHHHHHHHH
Confidence 1 456999988 6 44567777777776654
No 215
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.91 E-value=4.1e-22 Score=194.85 Aligned_cols=206 Identities=17% Similarity=0.152 Sum_probs=147.6
Q ss_pred CchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCeEEEe---CCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 98 NPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCSSGGHVVAA---RTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~~gd~Vi~~---~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
.+..+++++.+|+++|. +.+++|+||++||..++.+++++||+|+++ .|.|..+...+. ..|.++. ..
T Consensus 53 ~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~-----l~ga~~~--~~ 125 (346)
T TIGR03576 53 AIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCK-----LAGAEYF--ES 125 (346)
T ss_pred HHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHH-----HcCCEEe--cc
Confidence 36678999999999998 889999999999999999999999999975 467777666552 2566653 33
Q ss_pred CCHHHHHHhhccCCceEEEEEcCCCCCccc---cCHHHHHHHHHhcCCEEEEeCCCCCCC---CC---ccCCCCeEEEeC
Q 013210 173 SDHEMVNSAIVQGRTKVLYFESISNPTLAV---ANIPELSRLAHDKGVTVVVDNTFSPLV---LS---PARLGADVVVHS 243 (447)
Q Consensus 173 ~d~~~l~~~i~~~~t~lV~i~~~~NptG~v---~~l~~I~~la~~~gi~livD~~~~~~~---~~---~~~~g~di~~~S 243 (447)
.++++++. .+++++|+++. +|++|.+ .|+++|+++|+++|+++++||+|+.+. +. ....++|+++.|
T Consensus 126 ~~l~~l~~---~~~~~lIiitg-~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s 201 (346)
T TIGR03576 126 DELSELKK---IDGTSLVVITG-STMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTS 201 (346)
T ss_pred CCHHHHhh---CcCceEEEEEC-CCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEec
Confidence 56766533 24688888854 6899999 579999999999999999999995432 11 123467999999
Q ss_pred CCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHh
Q 013210 244 ISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKK 319 (447)
Q Consensus 244 ~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 319 (447)
+||++ +|.|+ ||+++++++++.+........ ...+++.+.++..++.... .....+.++++++.+.+.++.
T Consensus 202 ~SKal--aG~r~-G~v~~~~~li~~l~~~~~~~~-~s~~~~~~~aa~~aL~~~~-~~~~~~~l~~r~~~~~~~l~~ 272 (346)
T TIGR03576 202 TDKLM--DGPRG-GLLAGRKELVDKIKSVGEQFG-LEAQAPLLAAVVRALEEFE-LSRIRDAFKRKEEVYLRLFDK 272 (346)
T ss_pred cchhc--cccce-EEEEeCHHHHHHHHHhhcCcc-cCccHHHHHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHHh
Confidence 99954 45675 999999999999987765321 1122333333333343322 233445667777777777764
No 216
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.91 E-value=2.7e-22 Score=202.34 Aligned_cols=284 Identities=18% Similarity=0.201 Sum_probs=180.7
Q ss_pred ccccccccccCCH-HHHHHhhcCCC--CCCCCCccccCCCCchHHH-HHHHHHHHhCCCeE-EEeCChHHHHHHHHHHhc
Q 013210 61 SIEASATFTVMEP-ETMRRMFAGEL--GPDRDFFIYSRHFNPTVLN-LSRQMAALEGTEAA-YCTASGMSAISSVLMQLC 135 (447)
Q Consensus 61 pi~~att~~~~~~-~~~~~~~~~~~--~~~~~~~~~~r~~~~~~~~-l~~~ia~l~g~~~~-~~tsggt~A~~~al~~l~ 135 (447)
.+..+.+++.+++ +++...+...+ +++++.|..+......+++ +++.+++++|++.. ++++||++|+..++.+++
T Consensus 29 ~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~al~~~l~~l~ 108 (416)
T PRK00011 29 ELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPHSGSQANAAVYFALL 108 (416)
T ss_pred eeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeecCCchHHHHHHHHHhc
Confidence 3344555554555 55544443333 3444444334322233333 45589999998764 555678999999999999
Q ss_pred CCCCeEEEeCCCchhHHHHHHh-hcCcccCeeEEEeCCC------CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHH
Q 013210 136 SSGGHVVAARTLYGGTHALLTH-FFPRACNITTTFVDIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPEL 208 (447)
Q Consensus 136 ~~gd~Vi~~~~~y~~~~~~~~~-~~~~~~g~~~~~v~~~------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I 208 (447)
++||+|+++.++|+++...... .... .|.++.+++.+ |+++++++++..++++|+++.++ +|...|+++|
T Consensus 109 ~~gd~Vl~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~--~~~~~~~~~I 185 (416)
T PRK00011 109 KPGDTILGMDLAHGGHLTHGSPVNFSG-KLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASA--YSRPIDFKRF 185 (416)
T ss_pred CCCCEEEEeccccCCcccccccccccc-ceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCCc--CCCccCHHHH
Confidence 9999999999999865432211 1112 45677666542 79999999843478999886544 4577899999
Q ss_pred HHHHHhcCCEEEEeCCC-CCCCC-----CccCCCCeEEEeCCCccccCCCCeeEEEEEcC-hHHHHHHHHHhhhhhhhcC
Q 013210 209 SRLAHDKGVTVVVDNTF-SPLVL-----SPARLGADVVVHSISKFISGGADIIAGAVCGP-ANLVNSMMDLHQGALMLLG 281 (447)
Q Consensus 209 ~~la~~~gi~livD~~~-~~~~~-----~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~-~~~~~~l~~~~~~~~~~~g 281 (447)
.++|+++|+++|+|++| .+... .+.. ++|+++.|+||++++ .+ ||+++.+ +++++.++...... ..+
T Consensus 186 ~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~~~S~~K~l~g--~~-gg~i~~~~~~~~~~l~~~~~~~--~~~ 259 (416)
T PRK00011 186 REIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVVTTTTHKTLRG--PR-GGLILTNDEELAKKINSAVFPG--IQG 259 (416)
T ss_pred HHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEEEecCCcCCCC--CC-ceEEEeCCHHHHHHHHHHhCcc--ccC
Confidence 99999999999999997 33221 2233 689999999998853 34 4888775 68888887654421 112
Q ss_pred CCcc-HHHHH-HHH-ccC-CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 282 PTMN-PKVAF-ELS-ERI-PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 282 ~~~~-~~~a~-~~~-~~~-~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
+... ..++. .+. ..+ +.+.++.+++.++++++.+.|++.++++. +. . ..+.++++.++
T Consensus 260 ~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~--~---------------~~~~~~~i~~~ 321 (416)
T PRK00011 260 GPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGFRVV-SG--G---------------TDNHLVLVDLR 321 (416)
T ss_pred CccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeee-ec--C---------------CCCeEEEEeCc
Confidence 2222 22221 111 111 23566788899999999999998876553 11 0 01248888885
Q ss_pred CHH-HHHHHHHHhhc
Q 013210 358 TEE-KANRLMNYLQN 371 (447)
Q Consensus 358 ~~~-~~~~l~~~l~~ 371 (447)
+.. ....+.+.|..
T Consensus 322 ~~~~~~~~~~~~L~~ 336 (416)
T PRK00011 322 SKGLTGKEAEAALEE 336 (416)
T ss_pred ccCCCHHHHHHHHHH
Confidence 221 23556666664
No 217
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.91 E-value=1e-22 Score=205.19 Aligned_cols=292 Identities=15% Similarity=0.198 Sum_probs=194.5
Q ss_pred CCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhcCc--------ccC
Q 013210 97 FNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPR--------ACN 164 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~--------~~g 164 (447)
..+...++++.++++++ .+.++|++||++|+..+++.+. .++++|++.++.|++........... ...
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLL 156 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCC
Confidence 45677899999999998 7889999999999999998763 56899999999999876544221110 012
Q ss_pred eeEEEeCCC-----------CHHHHHHhhcc--CCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCC
Q 013210 165 ITTTFVDIS-----------DHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSP 227 (447)
Q Consensus 165 ~~~~~v~~~-----------d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~ 227 (447)
.++..++.+ |+++|++.+++ .++++|++++++|++|.+.+ +++|.++|++||+++|+||+|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g 236 (413)
T cd00610 157 PGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTG 236 (413)
T ss_pred CCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 245566665 78899998843 36789999999999999887 99999999999999999999965
Q ss_pred CCCC-----ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHH--HHHhhhhhhhcCCCccHHHHHHHHccCCcHH
Q 013210 228 LVLS-----PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSM--MDLHQGALMLLGPTMNPKVAFELSERIPHLG 300 (447)
Q Consensus 228 ~~~~-----~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l--~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~ 300 (447)
+... ....+.+.-+.|++|++++ |.++ |++++++++++.+ ..... ..+..++...+.++...+..++. .
T Consensus 237 ~g~~g~~~~~~~~~~~~d~~t~sK~l~~-g~~~-g~~~~~~~~~~~~~~~~~~~-~~t~~~~~~~~~a~~a~l~~l~~-~ 312 (413)
T cd00610 237 FGRTGKMFAFEHFGVEPDIVTLGKGLGG-GLPL-GAVLGREEIMDAFPAGPGLH-GGTFGGNPLACAAALAVLEVLEE-E 312 (413)
T ss_pred CCcCcchhhHhhcCCCCCeEEEcccccC-cccc-EEEEEcHHHHHhhccCCCCC-CCCCCcCHHHHHHHHHHHHHHHh-c
Confidence 5211 1112322224468899997 7888 8888898888876 22111 11122333333333333332222 2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--------HHHHHHHHHhhcc
Q 013210 301 LRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--------EKANRLMNYLQNY 372 (447)
Q Consensus 301 ~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--------~~~~~l~~~l~~~ 372 (447)
...+++.++.+++.+.|++.... .+. .. ...+.|+++++.+... .....+...|...
T Consensus 313 ~~~~~~~~~~~~l~~~l~~~~~~--~~~-~~------------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 377 (413)
T cd00610 313 GLLENAAELGEYLRERLRELAEK--HPL-VG------------DVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALER 377 (413)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhh--CCc-EE------------EeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHC
Confidence 35567778888888888765321 010 00 0014678999998743 3456677777652
Q ss_pred cccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 373 AQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 373 ~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
| +.++.+ ..+.+|++++ ...+++.++.+.++|+++
T Consensus 378 ---g-v~v~~~---------------------------~~~~lR~~~~-~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 378 ---G-LLLRPS---------------------------GGNVIRLLPP-LIITEEEIDEGLDALDEA 412 (413)
T ss_pred ---C-eEEeec---------------------------CCCEEEEECC-CcCCHHHHHHHHHHHHHh
Confidence 3 232222 0367999999 877888888887777653
No 218
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.91 E-value=5e-22 Score=197.96 Aligned_cols=286 Identities=15% Similarity=0.198 Sum_probs=192.0
Q ss_pred CCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhc---C----CCCeEEEeCCCchhHHHHHHhhcCc-------
Q 013210 96 HFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLC---S----SGGHVVAARTLYGGTHALLTHFFPR------- 161 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~---~----~gd~Vi~~~~~y~~~~~~~~~~~~~------- 161 (447)
+..+...++++++++++|.+.+++++||++|+..+++.+. . ++++|+++.+.|+++..........
T Consensus 66 ~~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~ 145 (379)
T TIGR00707 66 YYTEPQEELAEKLVEHSGADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGF 145 (379)
T ss_pred cCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccC
Confidence 3567789999999999999999999999999999998652 2 3799999999998765444211110
Q ss_pred -ccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCcccc----CHHHHHHHHHhcCCEEEEeCCCCCCCCCc----
Q 013210 162 -ACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVA----NIPELSRLAHDKGVTVVVDNTFSPLVLSP---- 232 (447)
Q Consensus 162 -~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~----~l~~I~~la~~~gi~livD~~~~~~~~~~---- 232 (447)
....++.+++.+|++++++.+ ++++++|++++++|++|... ++++|.++|+++|+++|+||+|.++....
T Consensus 146 ~~~~~~~~~~~~~d~~~l~~~~-~~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~ 224 (379)
T TIGR00707 146 EPLVPGFSYAPYNDIESLKKAI-DDETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFA 224 (379)
T ss_pred CCCCCCceeeCCCCHHHHHHHh-hhCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhh
Confidence 011234455556899999998 67899999988888888653 38899999999999999999996553321
Q ss_pred ---cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHH
Q 013210 233 ---ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHR 309 (447)
Q Consensus 233 ---~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~ 309 (447)
.....|++ ++||.++ +|.|+ ||+++++++++.+....... ...++.+.+.++..++..++. ....++++++
T Consensus 225 ~~~~~~~~d~~--t~sK~~~-~G~ri-G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~aa~aaL~~~~~-~~~~~~~~~~ 298 (379)
T TIGR00707 225 YEHYGIEPDII--TLAKGLG-GGVPI-GATLAKEEVAEAFTPGDHGS-TFGGNPLACAAALAVLEVIEK-ERLLENVKEK 298 (379)
T ss_pred HHhcCCCCCEE--EEccccc-CCccc-EEEEEcHHHHhhhcCCCCCC-CCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHH
Confidence 11234544 6899999 88998 89999998888876532211 122333333344434333221 2355677788
Q ss_pred HHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccc
Q 013210 310 ALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLM 389 (447)
Q Consensus 310 ~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~ 389 (447)
++++.+.|++.+....... .+ +.|.++++.++.. ...+.+.|... | +.+..+
T Consensus 299 ~~~~~~~l~~~~~~~~~~~---~~-------------~~g~~~~~~~~~~--~~~~~~~l~~~---G-v~v~~~------ 350 (379)
T TIGR00707 299 GDYFKERLEELGKNYPNKE---VR-------------GKGLMLGIELEAP--CKDIVKKALEK---G-LLVNCA------ 350 (379)
T ss_pred HHHHHHHHHHHHhhCCCCc---cc-------------cCceEEEEEecCc--HHHHHHHHHHC---C-cEEeeC------
Confidence 8888888876533221110 01 3466889988643 45677777652 3 232211
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 390 SCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 390 ~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
..+.+|||++ ...+++.++.+.++|++
T Consensus 351 ---------------------~~~~lRi~~~-~~~t~~~i~~~~~~l~~ 377 (379)
T TIGR00707 351 ---------------------GPKVLRFLPP-LIITKEEIDEAVSALEE 377 (379)
T ss_pred ---------------------CCCEEEEECC-CcCCHHHHHHHHHHHHH
Confidence 1367999988 65667777777776654
No 219
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.91 E-value=1.1e-22 Score=203.89 Aligned_cols=247 Identities=21% Similarity=0.219 Sum_probs=183.0
Q ss_pred ccccccCCH-HHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEE
Q 013210 65 SATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVA 143 (447)
Q Consensus 65 att~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~ 143 (447)
+.++..+++ +.+.++++. ++|....+..+.. ......+++.+|+++|++.+++++||+.|+++++.+ +.+||+||+
T Consensus 89 g~s~l~~~vieAv~~~~~~-y~~l~~~l~~g~~-g~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~-l~~GdeVIv 165 (454)
T TIGR00474 89 GRAPLAEEAIEAVTDAARG-YSNLEYDLETGKR-GSRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNT-LAKGKEVIV 165 (454)
T ss_pred CCCCCCHHHHHHHHHHHhc-ccchhcccccccc-chHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHH-hCCcCEEEE
Confidence 334444444 666666654 3333211111222 344689999999999999999999999999998854 688999999
Q ss_pred eCCCc---hhHHHHHHhhcCcccCeeEEEeCC---CCHHHHHHhhccCCceEEEEEcCCCCC--c--cccCHHHHHHHHH
Q 013210 144 ARTLY---GGTHALLTHFFPRACNITTTFVDI---SDHEMVNSAIVQGRTKVLYFESISNPT--L--AVANIPELSRLAH 213 (447)
Q Consensus 144 ~~~~y---~~~~~~~~~~~~~~~g~~~~~v~~---~d~~~l~~~i~~~~t~lV~i~~~~Npt--G--~v~~l~~I~~la~ 213 (447)
+..+| ++..... ..+.+ .|+++++++. .+++++++++ +++|++|++++++|++ | .+.|+++|+++||
T Consensus 166 s~~e~v~~ggs~~i~-~~~~~-~G~~~~~v~~~~~~~l~dle~aI-~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~ 242 (454)
T TIGR00474 166 SRGELVEIGGSFRIP-DVMEQ-SGAKLVEVGTTNRTHLKDYEDAI-TENTALLLKVHTSNYRIVGFTEEVSIAELVALGR 242 (454)
T ss_pred CCChhhhhcchhhHH-HHHHH-cCCEEEEeCCCCCCCHHHHHHhc-CcCCEEEEEEccCcccccCCCCCCCHHHHHHHHH
Confidence 99875 3333332 33344 7999999986 4789999999 8899999999999985 5 5789999999999
Q ss_pred hcCCEEEEeCCCCC-------------CCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHH------Hhh
Q 013210 214 DKGVTVVVDNTFSP-------------LVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMD------LHQ 274 (447)
Q Consensus 214 ~~gi~livD~~~~~-------------~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~------~~~ 274 (447)
+||+++++|++.+- ...++.+.|+|++++|++|++|||. +|++++++++++.++. .+-
T Consensus 243 ~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~---~G~i~g~~~~i~~l~~~~l~r~lr~ 319 (454)
T TIGR00474 243 EHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ---AGIIVGKKELIERLKKNPLTRALRV 319 (454)
T ss_pred HcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCe---EEEEEECHHHHHhhhhchhHHHHhh
Confidence 99999999987321 1235567799999999999999873 5999999888765432 110
Q ss_pred ------hhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhC
Q 013210 275 ------GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKL 320 (447)
Q Consensus 275 ------~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~ 320 (447)
......+..+.+..++..+..++++..++++++++++.++++|++.
T Consensus 320 ~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~ 371 (454)
T TIGR00474 320 DKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAA 371 (454)
T ss_pred ChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhh
Confidence 1111344445566677778888888999999999999999999874
No 220
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.90 E-value=3e-21 Score=191.74 Aligned_cols=306 Identities=17% Similarity=0.198 Sum_probs=204.0
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHh-cCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC---
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 173 (447)
.+.+.++|+++|+++|++.+++|+|||+|+.+++.++ +++||+|+++.++|.++...+. ..|++++++|.+
T Consensus 32 g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~-----~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 32 GPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIV-----LLGATPVMVDVDRDT 106 (379)
T ss_pred CHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHH-----HcCCEEEEEecCCCc
Confidence 5678999999999999999999999999999999998 7899999999999999877662 268889888763
Q ss_pred ---CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCC-CCCCC---ccCCCCeEEEeCCCc
Q 013210 174 ---DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PLVLS---PARLGADVVVHSISK 246 (447)
Q Consensus 174 ---d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~~~~---~~~~g~di~~~S~sK 246 (447)
|++++++++ +++|++|+ |+|++|.+.|+++|.++|+++|+++|+|++|+ +..+. ....|.++.+++.+|
T Consensus 107 ~~~d~~~l~~~i-~~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K 182 (379)
T PRK11658 107 LMVTPEAIEAAI-TPRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIK 182 (379)
T ss_pred CCcCHHHHHHhc-ccCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCCCC
Confidence 789999999 77899887 56789999999999999999999999999994 33332 234466666777778
Q ss_pred cccCCCCeeEEEEEc-ChHHHHHHHHHhhhhhh------------------hcC--CCccHHHHHHHHccCCcHHHHHHH
Q 013210 247 FISGGADIIAGAVCG-PANLVNSMMDLHQGALM------------------LLG--PTMNPKVAFELSERIPHLGLRMKE 305 (447)
Q Consensus 247 ~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~------------------~~g--~~~~~~~a~~~~~~~~~l~~~~~~ 305 (447)
.+.+ | . ||+++. ++++.++++..+..... ..| ..+....|+..+..++.+.+..++
T Consensus 183 ~l~~-g-~-GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~ 259 (379)
T PRK11658 183 NITC-A-E-GGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNAR 259 (379)
T ss_pred cCcc-c-C-ceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHH
Confidence 7754 3 2 587775 57888877655431100 012 123344555555556667777788
Q ss_pred HHHHHHHHHHHHHhCCCe-eeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC---HHHHHHHHHHhhccccccccccc
Q 013210 306 HCHRALIFARRMKKLGLK-VLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET---EEKANRLMNYLQNYAQFGFMAVS 381 (447)
Q Consensus 306 ~~~~~~~l~~~L~~~~~~-v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~---~~~~~~l~~~l~~~~~~g~~~vs 381 (447)
.+++++++.+.|++.+.. +..|...... .-.++.+.++. ......+++.|... | |.+.
T Consensus 260 r~~~a~~~~~~L~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~r~~~~~~L~~~---g-I~~~ 321 (379)
T PRK11658 260 RREIAARYLQALADLPFQPLSLPAWPHQH--------------AWHLFIIRVDEERCGISRDALMEALKER---G-IGTG 321 (379)
T ss_pred HHHHHHHHHHHhcCCCCccCcCCCCCCce--------------eEEEEEEEECCccccCCHHHHHHHHHHC---C-CCCc
Confidence 888888888888876542 2222211000 01255566542 12356777888753 3 3322
Q ss_pred ccCccccccccccc---cCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 382 LGYYETLMSCSGSS---TSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 382 ~G~~~s~~~~~a~~---~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
... ..+-..|... ....++..+. +....|.+-++ ..-+++.++.+.++++++
T Consensus 322 ~~~-~~~~~~~~~~~~~~~~~~p~~~~----~~~~~l~lP~~-~~l~~~~~~~i~~~i~~~ 376 (379)
T PRK11658 322 LHF-RAAHTQKYYRERFPTLSLPNTEW----NSERICSLPLF-PDMTDADVDRVITALQQI 376 (379)
T ss_pred ccC-cCcccChhhhccCCCCCChHHHH----HHhCeEEccCC-CCCCHHHHHHHHHHHHHH
Confidence 221 1111111111 0112222222 12356777777 667777788888888765
No 221
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.90 E-value=2.3e-22 Score=197.71 Aligned_cols=273 Identities=15% Similarity=0.096 Sum_probs=186.5
Q ss_pred CCCccccCCCCchHHHHHHHHHHHhCCC----eEEEeCChHHHHHHHHHHhcC------------CC--CeEEEeCCCch
Q 013210 88 RDFFIYSRHFNPTVLNLSRQMAALEGTE----AAYCTASGMSAISSVLMQLCS------------SG--GHVVAARTLYG 149 (447)
Q Consensus 88 ~~~~~~~r~~~~~~~~l~~~ia~l~g~~----~~~~tsggt~A~~~al~~l~~------------~g--d~Vi~~~~~y~ 149 (447)
...|..+.......+++.+.+++++|.+ .++||+|||+|+..++.++.. ++ +.|+++.++|.
T Consensus 27 ~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~ 106 (345)
T cd06450 27 DFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHV 106 (345)
T ss_pred CcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchh
Confidence 3334444433444455666677887875 599999999999999988642 22 37888889998
Q ss_pred hHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccC------CceEEEEEcCCCCCccccCHHHHHHHHHhcCCE
Q 013210 150 GTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQG------RTKVLYFESISNPTLAVANIPELSRLAHDKGVT 218 (447)
Q Consensus 150 ~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~ 218 (447)
++...+. ..|.+++.++.+ |+++|++++ ++ ++++|++++++||+|.+.|+++|+++|+++|++
T Consensus 107 ~~~~~~~-----~~g~~~~~v~~~~~~~~d~~~l~~~i-~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~ 180 (345)
T cd06450 107 SVEKAAA-----YLDVKVRLVPVDEDGRMDPEALEAAI-DEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLW 180 (345)
T ss_pred HHHHHHH-----HHhcCeEEeeeCCCCCcCHHHHHHHH-HHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCe
Confidence 8776663 146677776643 899999988 54 788999999999999999999999999999999
Q ss_pred EEEeCCCCCCCC--Ccc-----C-CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHH
Q 013210 219 VVVDNTFSPLVL--SPA-----R-LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAF 290 (447)
Q Consensus 219 livD~~~~~~~~--~~~-----~-~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~ 290 (447)
+|+|++|+.+.. ... . .++|+++.|+||++++|. ++ |+++.+ ....+
T Consensus 181 l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~-g~-g~~~~~-----------------------~~~~~ 235 (345)
T cd06450 181 LHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPL-GC-SAVLVR-----------------------ALKLW 235 (345)
T ss_pred EEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCc-ch-HHHHHH-----------------------HHHHH
Confidence 999999943322 111 1 268999999999887543 24 665444 11111
Q ss_pred HHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC----HHHHH
Q 013210 291 ELSE--RIPHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET----EEKAN 363 (447)
Q Consensus 291 ~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~----~~~~~ 363 (447)
..+. ....+.++.++..++++++.+.|++.+. .+..+. .++++.|.++. .....
T Consensus 236 ~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-------------------~~~iv~f~~~~~~~~~~~~~ 296 (345)
T cd06450 236 ATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEP-------------------NLSLVCFRLKPSVKLDELNY 296 (345)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-------------------ceeEEEEEECCcchhhHHHH
Confidence 1111 1233566778888899999999988754 443321 23488898875 23456
Q ss_pred HHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCC-CHHHHHHHHHHHHHH
Q 013210 364 RLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLG-TLDQRWSQFEKALSR 438 (447)
Q Consensus 364 ~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~-~~~~~i~~l~~al~~ 438 (447)
.+.+.|... |.+.++ + .. .+ .++.+|+|++ .. ++.++++.|.++|++
T Consensus 297 ~i~~~L~~~---g~~~~~-~----------~~------------~~-~~~~lRis~~-~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 297 DLSDRLNER---GGWHVP-A----------TT------------LG-GPNVLRFVVT-NPLTTRDDADALLEDIER 344 (345)
T ss_pred HHHHHHHhc---CCEEEE-e----------eE------------EC-CeEEEEEEec-CCCCCHHHHHHHHHHHHh
Confidence 677777652 211111 1 00 00 2468999999 75 588999999988875
No 222
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.90 E-value=1.4e-21 Score=197.42 Aligned_cols=305 Identities=17% Similarity=0.133 Sum_probs=197.2
Q ss_pred ccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEe
Q 013210 91 FIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 170 (447)
Q Consensus 91 ~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v 170 (447)
..|+. .+...+||+.++++++.+.+++|+||++|+.+++++++++|| |+++++.|..+...+. ..|.+++++
T Consensus 72 ~~Y~~--~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~-----~~G~~~v~v 143 (460)
T PRK13238 72 EAYAG--SRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIE-----LNGATAVDL 143 (460)
T ss_pred cccCC--CCCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHH-----HcCCEEEEE
Confidence 34543 445688999999999999999999999999999999999999 9999998888876652 257777666
Q ss_pred CC---------------CCHHHHHHhhcc---CCceEEEEEcCCCCCc-cccC---HHHHHHHHHhcCCEEEEeCCC-C-
Q 013210 171 DI---------------SDHEMVNSAIVQ---GRTKVLYFESISNPTL-AVAN---IPELSRLAHDKGVTVVVDNTF-S- 226 (447)
Q Consensus 171 ~~---------------~d~~~l~~~i~~---~~t~lV~i~~~~NptG-~v~~---l~~I~~la~~~gi~livD~~~-~- 226 (447)
+. .|+++|++.+.. ++|++|++++|+||+| .+.+ +++|.++|++||+++|+|+++ .
T Consensus 144 ~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e 223 (460)
T PRK13238 144 VIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAE 223 (460)
T ss_pred eccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhh
Confidence 54 378999999832 4799999999999998 7765 679999999999999999977 2
Q ss_pred CCCC--------CccC---------CCCeEEEeCCCccccCCCCeeEEEEEcC-hHHHHHHHHHh---hhhhhhcCCCcc
Q 013210 227 PLVL--------SPAR---------LGADVVVHSISKFISGGADIIAGAVCGP-ANLVNSMMDLH---QGALMLLGPTMN 285 (447)
Q Consensus 227 ~~~~--------~~~~---------~g~di~~~S~sK~~g~~g~~igG~l~~~-~~~~~~l~~~~---~~~~~~~g~~~~ 285 (447)
...+ .... ...|++++|.+|...++ +||+++.+ +++++.++... .+..+..|.+..
T Consensus 224 ~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~---~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~ 300 (460)
T PRK13238 224 NAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVN---IGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGR 300 (460)
T ss_pred hhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCc---ceeEEEcChHHHHHHhhhcccccCCcccccCcHHH
Confidence 1211 1111 13789999999986654 46888877 57888876653 122222332333
Q ss_pred HHHHHH-HHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-----
Q 013210 286 PKVAFE-LSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE----- 359 (447)
Q Consensus 286 ~~~a~~-~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~----- 359 (447)
.+.|.+ .+..... ....+...+++++|.+.|++.|+.+..|. .|..+.+.+...
T Consensus 301 ~~~Ala~~l~e~~~-~~~~~~~~~~~~~l~~~L~~~G~~~~~p~-------------------Gg~~v~~d~~~~~~~~~ 360 (460)
T PRK13238 301 DMEALAVGLYEGMD-EDYLAYRIGQVEYLGEGLEEAGVPIQTPA-------------------GGHAVFVDAGKFLPHIP 360 (460)
T ss_pred HHHHHHhhHHHhhC-hHHHHHHHHHHHHHHHHHHHCCCCeEccC-------------------CceEEEEEchhcCCCCC
Confidence 223322 2221101 12333344567999999999888777654 344555555321
Q ss_pred ---HHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC-CCHHHHHHHHHHH
Q 013210 360 ---EKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL-GTLDQRWSQFEKA 435 (447)
Q Consensus 360 ---~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~-~~~~~~i~~l~~a 435 (447)
-....|...|-. +.|+.++..|.. .. ......... .--+..++||.+- . .=+++.++.+.++
T Consensus 361 ~~~~~~~~~a~~L~~--e~GV~~~~~~~f-~~--~~~~~~~~~--------~~~~~~~~Rla~~-rr~~~~~~~~~~~~~ 426 (460)
T PRK13238 361 AEQFPAQALACELYL--EAGIRGVEIGSL-LL--GRDPKTGEQ--------LPAPAELLRLAIP-RRVYTQSHMDYVAEA 426 (460)
T ss_pred CCCCchHHHHHHHHH--HcCeeeecccce-ec--ccCCCCccc--------cCCccceEEEecc-cccCCHHHHHHHHHH
Confidence 013556666654 245433333321 11 010000000 0012478999999 5 3356667777777
Q ss_pred HHHhh
Q 013210 436 LSRMQ 440 (447)
Q Consensus 436 l~~~~ 440 (447)
|.++.
T Consensus 427 l~~~~ 431 (460)
T PRK13238 427 LKAVK 431 (460)
T ss_pred HHHHH
Confidence 77664
No 223
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=1.3e-22 Score=193.39 Aligned_cols=291 Identities=18% Similarity=0.280 Sum_probs=200.8
Q ss_pred CCCchHHHHHHHHHHHhC-CCeEEEeCChHHHHHHHHHHhcCC-----CCeEEEeCCCchhHH-HHH----H-----hhc
Q 013210 96 HFNPTVLNLSRQMAALEG-TEAAYCTASGMSAISSVLMQLCSS-----GGHVVAARTLYGGTH-ALL----T-----HFF 159 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g-~~~~~~tsggt~A~~~al~~l~~~-----gd~Vi~~~~~y~~~~-~~~----~-----~~~ 159 (447)
+.++...++.++|+++.+ .+.++|+|||+||+..|++...+- ..+||.....||+-. ..+ + .+.
T Consensus 81 ~~~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~ 160 (404)
T COG4992 81 FYNEPQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFG 160 (404)
T ss_pred cCChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCC
Confidence 456777899999999996 899999999999999999865321 248999888887632 222 1 122
Q ss_pred CcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCCc---
Q 013210 160 PRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLSP--- 232 (447)
Q Consensus 160 ~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~~--- 232 (447)
|. --.++++|.+|++++++++ +++|.+|++|.++.+.|.+.+ ++++.++|++||+++|.||+|+++....
T Consensus 161 Pl--~~g~~~vpfnDi~al~~ai-~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~f 237 (404)
T COG4992 161 PL--LPGFRHVPFNDIEALEAAI-DEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLF 237 (404)
T ss_pred CC--CCCceecCCCCHHHHHHHh-ccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHH
Confidence 22 1246778888999999999 779999999999999999975 8899999999999999999997775321
Q ss_pred --cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHH
Q 013210 233 --ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRA 310 (447)
Q Consensus 233 --~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~ 310 (447)
...|+...+.++.|.+|+ |.+| |+++.++.+.+.+....+ ..++.|++++..++.+.+..+.. +...++.++..
T Consensus 238 A~e~~gV~PDI~tlaK~LgG-G~Pi-gA~la~~~~~~~~~~G~H-gSTfGGNpLacAv~~a~l~~l~~-e~ll~~v~~~g 313 (404)
T COG4992 238 AYEHYGVEPDILTLAKALGG-GFPI-GAMLATEEIASAFTPGDH-GSTFGGNPLACAVALAVLEVLLE-EGLLENVREKG 313 (404)
T ss_pred HHHHhCCCCCEEEeeccccC-Cccc-eeeEEchhhhhcCCCCcc-cCCCCcCHHHHHHHHHHHHHHcc-hhHHHHHHHHH
Confidence 222444444449999995 5889 666666555555554444 34566666666555555544322 23445566777
Q ss_pred HHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCcccccc
Q 013210 311 LIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMS 390 (447)
Q Consensus 311 ~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~ 390 (447)
++|.+.|+++..+ +|-+. +..|.|.++.+++.....+..+++.+.. .|++....|
T Consensus 314 ~~~~~~L~~l~~~--~~~v~-------------~vRG~GLmiGiel~~~~~a~~~~~~~~~---~gvL~~~a~------- 368 (404)
T COG4992 314 EYLLQRLRELKRR--YPLVK-------------EVRGRGLMIGIELKEPYRARDIVRALRE---EGVLVLPAG------- 368 (404)
T ss_pred HHHHHHHHHHhhc--CCcee-------------eeecceeEEEEEecCcccHHHHHHHHHH---CCeEEecCC-------
Confidence 7788888765321 11111 2337899999999854346778888875 344443333
Q ss_pred ccccccCCCCCHHHHHhcCCCCCeEEEEeCCC----CCHHHHHHHHHHHHHHhh
Q 013210 391 CSGSSTSSELNAEEKALAGISAGLVRMSVGYL----GTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 391 ~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~----~~~~~~i~~l~~al~~~~ 440 (447)
++.|||... . +++++.++.|+++|+...
T Consensus 369 ---------------------~~ViR~~Pp-L~i~~eei~~~~~~l~~~l~~~~ 400 (404)
T COG4992 369 ---------------------PNVIRFLPP-LVITEEEIDEALDALERALAAAS 400 (404)
T ss_pred ---------------------CCeEEecCC-ccCCHHHHHHHHHHHHHHHHHhh
Confidence 356888777 4 566666666777766543
No 224
>PLN02397 aspartate transaminase
Probab=99.90 E-value=4e-21 Score=193.59 Aligned_cols=221 Identities=12% Similarity=0.099 Sum_probs=146.7
Q ss_pred ccccCCCCchHHHHHHHHHHHhCCC--------eE--EEeCChH--HHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhh
Q 013210 91 FIYSRHFNPTVLNLSRQMAALEGTE--------AA--YCTASGM--SAISSVLMQLCSSGGHVVAARTLYGGTHALLTHF 158 (447)
Q Consensus 91 ~~~~r~~~~~~~~l~~~ia~l~g~~--------~~--~~tsggt--~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~ 158 (447)
+.|+.. .-..+||+.+++++... .+ ..+.+|+ .++..++..++.+||+|++++|.|+.+...+.
T Consensus 85 ~~Y~~~--~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~-- 160 (423)
T PLN02397 85 KEYLPI--EGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFR-- 160 (423)
T ss_pred CCCCCc--CCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHH--
Confidence 345532 23357888899876321 23 1133333 34555555566799999999999999988773
Q ss_pred cCcccCeeEEEeCC-------CCHHHHHHhhc--cCCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCC
Q 013210 159 FPRACNITTTFVDI-------SDHEMVNSAIV--QGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFS 226 (447)
Q Consensus 159 ~~~~~g~~~~~v~~-------~d~~~l~~~i~--~~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~ 226 (447)
..|.++..++. .|++.+++.++ +++++++++.+||||||.+.+ +++|+++|++||+++|+|++|.
T Consensus 161 ---~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~ 237 (423)
T PLN02397 161 ---DAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQ 237 (423)
T ss_pred ---HcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccC
Confidence 25777766643 17888877773 256888999999999999986 5678888999999999999997
Q ss_pred CCCCCc--------cC---C-CCeEEEeCCCccccCCCCeeEEEEE---cChHHHHHHH----HHhhhhhhhcC-CCccH
Q 013210 227 PLVLSP--------AR---L-GADVVVHSISKFISGGADIIAGAVC---GPANLVNSMM----DLHQGALMLLG-PTMNP 286 (447)
Q Consensus 227 ~~~~~~--------~~---~-g~di~~~S~sK~~g~~g~~igG~l~---~~~~~~~~l~----~~~~~~~~~~g-~~~~~ 286 (447)
.+.++. .. . ...+++.||||.|+++|+|+ ||++ .++++++.+. ...... ..+ +...+
T Consensus 238 ~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~Rv-G~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q 314 (423)
T PLN02397 238 GFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERV-GALSVVCKSADVAVRVKSQLKLIARPM--YSNPPIHGA 314 (423)
T ss_pred CccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccc-eEEEEEeCCHHHHHHHHHHHHHHHhcc--cCCCcHHHH
Confidence 765431 01 1 24688999999999999999 9874 4566554433 222210 112 22233
Q ss_pred HHHHHHHccCC-------cHHHHHHHHHHHHHHHHHHHHhCC
Q 013210 287 KVAFELSERIP-------HLGLRMKEHCHRALIFARRMKKLG 321 (447)
Q Consensus 287 ~~a~~~~~~~~-------~l~~~~~~~~~~~~~l~~~L~~~~ 321 (447)
.++..++.... .+....+++.++++.+.+.|++++
T Consensus 315 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~ 356 (423)
T PLN02397 315 SIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARG 356 (423)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33333333211 133455678899999999999875
No 225
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.90 E-value=5e-22 Score=199.11 Aligned_cols=290 Identities=15% Similarity=0.235 Sum_probs=186.7
Q ss_pred CCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCC-------CeEEEeCCCchhHHHHHHhhcCcc------
Q 013210 96 HFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSG-------GHVVAARTLYGGTHALLTHFFPRA------ 162 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~g-------d~Vi~~~~~y~~~~~~~~~~~~~~------ 162 (447)
+..+...++++.++++.+.+.+++|+||++|+.++++.+...+ ++|++..+.|+++...........
T Consensus 78 ~~~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 157 (396)
T PRK02627 78 YYIEPQEELAEKLVELSGMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGF 157 (396)
T ss_pred cCCHHHHHHHHHHHhhcCCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccC
Confidence 3477888999999999999999999999999999998765432 679999999987754432111000
Q ss_pred --cCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCcc-ccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC-----
Q 013210 163 --CNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLA-VAN---IPELSRLAHDKGVTVVVDNTFSPLVLS----- 231 (447)
Q Consensus 163 --~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~-v~~---l~~I~~la~~~gi~livD~~~~~~~~~----- 231 (447)
....+..++..|++++++++ .+++++|++++++||+|. +.+ +++|.++|++||+++|+||+|+++...
T Consensus 158 ~~~~~~~~~~~~~d~~~l~~~i-~~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~ 236 (396)
T PRK02627 158 EPLVEGFIYVPFNDIEALKAAI-TDKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFA 236 (396)
T ss_pred CCCCCCceEeCCCCHHHHHHhc-CCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceee
Confidence 01123445556999999999 778999999999999994 443 889999999999999999999665322
Q ss_pred ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHH
Q 013210 232 PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRAL 311 (447)
Q Consensus 232 ~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~ 311 (447)
....+.+.-+.|+||.++ +|.|+ |++++++++++.+..... .....++.+.+.++..++..++. ....++..++.+
T Consensus 237 ~~~~~~~pdi~t~sK~~~-~G~ri-g~~~~~~~~~~~~~~~~~-~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~ 312 (396)
T PRK02627 237 YQHYGIEPDIMTLAKGLG-GGVPI-GAVLAKEKVADVFTPGDH-GSTFGGNPLACAAALAVIEIIEE-EGLLENAAEVGE 312 (396)
T ss_pred ehhcCCCCCEEEEcchhh-CCccc-EEEEEcHHHHhccCCCCC-CCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Confidence 112233222446899999 78998 888888888877754322 11233333444444444433222 123445556666
Q ss_pred HHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccc
Q 013210 312 IFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSC 391 (447)
Q Consensus 312 ~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~ 391 (447)
++.+.|++..... |.... ..+.|.++++.+.. ....+...+... |+ .+..+
T Consensus 313 ~~~~~l~~~~~~~--~~~~~-------------~~~~g~~~~i~~~~--~~~~~~~~l~~~---Gv-~v~~~-------- 363 (396)
T PRK02627 313 YLRAKLRELLEKY--PGIKE-------------VRGLGLMIGIELDR--PAAEIVKKALEK---GL-LINVT-------- 363 (396)
T ss_pred HHHHHHHHHHHhC--CCeee-------------eccCcEEEEEEecC--cHHHHHHHHHHC---Ce-EEeec--------
Confidence 6666665532111 11110 01467789998842 256677777652 32 22211
Q ss_pred cccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 392 SGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 392 ~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
..+.+||++. ...+++.++.+.+.|++.
T Consensus 364 -------------------~~~~lRi~~~-~~~~~~~i~~~~~~l~~~ 391 (396)
T PRK02627 364 -------------------GDNVLRLLPP-LIISKEEIDEAVDRLEEV 391 (396)
T ss_pred -------------------CCCEEEEECC-cccCHHHHHHHHHHHHHH
Confidence 1366999987 555566666666555543
No 226
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.90 E-value=8.7e-22 Score=196.81 Aligned_cols=289 Identities=16% Similarity=0.166 Sum_probs=184.1
Q ss_pred CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHh----cCCCC----eEEEeCCCchhHHHHHHhhcC--cc-cC-
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQL----CSSGG----HVVAARTLYGGTHALLTHFFP--RA-CN- 164 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l----~~~gd----~Vi~~~~~y~~~~~~~~~~~~--~~-~g- 164 (447)
.++...+++++++++.+.+.++|++||++|+..+++.+ ..+|+ +|++.++.||++......... .. .+
T Consensus 71 ~~~~~~~la~~l~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 150 (389)
T PRK01278 71 RIPEQERLAERLVENSFADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGF 150 (389)
T ss_pred CChHHHHHHHHHHhhCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccC
Confidence 45667889999999988889999999999999999876 34454 899999999987654421100 00 00
Q ss_pred ----eeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCcccc----CHHHHHHHHHhcCCEEEEeCCCCCCCCCc----
Q 013210 165 ----ITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVA----NIPELSRLAHDKGVTVVVDNTFSPLVLSP---- 232 (447)
Q Consensus 165 ----~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~----~l~~I~~la~~~gi~livD~~~~~~~~~~---- 232 (447)
..+..++..|++++++++ ++++++|++++++|++|.+. .+++|.++|++||+++|+||+|+++....
T Consensus 151 ~~~~~~~~~~~~~d~~~l~~~l-~~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~ 229 (389)
T PRK01278 151 GPLVPGFDQVPFGDIEALKAAI-TPNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFA 229 (389)
T ss_pred CCCCCCceEeCCCCHHHHHHhh-CCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccee
Confidence 113345556999999999 67899999999999999443 48899999999999999999996553211
Q ss_pred -cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHH
Q 013210 233 -ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRAL 311 (447)
Q Consensus 233 -~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~ 311 (447)
...+.+..+.|++|.++ +|.++ |++++++++++.+..... ..+..++.+.+.++..++..++. ....++..++.+
T Consensus 230 ~~~~~~~pdi~t~sK~l~-~G~~i-g~~~~~~~~~~~~~~~~~-~~t~~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~~ 305 (389)
T PRK01278 230 HEWAGVTPDIMAVAKGIG-GGFPL-GACLATEEAAKGMTPGTH-GSTYGGNPLAMAVGNAVLDVILA-PGFLDNVQRMGL 305 (389)
T ss_pred ecccCCCCCEEEEehhcc-CCcce-EEEEEcHHHHhccCCCCC-CCCCCccHHHHHHHHHHHHHHhh-hHHHHHHHHHHH
Confidence 11233333457999999 68898 888888888777754333 22223333333334333433321 123455566666
Q ss_pred HHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccc
Q 013210 312 IFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSC 391 (447)
Q Consensus 312 ~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~ 391 (447)
++.+.|++.... +|.+.. ...|.|.++++++.. ....+.+.|... |+ .+.
T Consensus 306 ~l~~~l~~l~~~--~~~~~~------------~v~g~G~~~~i~~~~--~~~~~~~~l~~~---GV-~~~---------- 355 (389)
T PRK01278 306 YLKQKLEGLVDR--FPDVIE------------EVRGKGLLLGLKCVV--PNRDLVQALRDE---GL-LTV---------- 355 (389)
T ss_pred HHHHHHHHHHhh--CCCcee------------eEecccEEEEEEEec--CHHHHHHHHHHC---Ce-EEe----------
Confidence 777766653110 111000 111467788888853 245677777652 32 211
Q ss_pred cccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 392 SGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 392 ~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
|. ..+.|||++. ...+++.++.+.+.|++
T Consensus 356 p~-----------------~~~~lR~~p~-~~~~~~~i~~~l~~l~~ 384 (389)
T PRK01278 356 GA-----------------GDNVVRLLPP-LIITEEEIDEALERLER 384 (389)
T ss_pred ec-----------------CCCEEEEeCC-cccCHHHHHHHHHHHHH
Confidence 11 1367999987 54445555555555544
No 227
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.89 E-value=8e-21 Score=189.22 Aligned_cols=306 Identities=18% Similarity=0.210 Sum_probs=204.2
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHh-cCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC---
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 173 (447)
.+...++|+.+|+++|.+.+++++||++|+.+++.++ +++||+|+++.++|.++...+. ..|.++++++.+
T Consensus 28 g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~-----~~G~~~~~~~~~~~~ 102 (380)
T TIGR03588 28 GPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCAL-----YCGAKVDFVDIDPDT 102 (380)
T ss_pred ChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHH-----HcCCEEEEEecCCCc
Confidence 4667899999999999988888999999999999998 7899999999999998876652 268889888763
Q ss_pred ---CHHHHHHhhcc----CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCC-CCCCCccCCCC----eEEE
Q 013210 174 ---DHEMVNSAIVQ----GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PLVLSPARLGA----DVVV 241 (447)
Q Consensus 174 ---d~~~l~~~i~~----~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~~~~~~~~g~----di~~ 241 (447)
|++++++++ + ++|++|++ .|++|...|+++|.++|+++|+++|+|++|+ +..++...+|. |+.+
T Consensus 103 ~~~d~~~l~~~i-~~~~~~~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~ 178 (380)
T TIGR03588 103 GNIDEDALEKKL-AAAKGKLPKAIVP---VDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATV 178 (380)
T ss_pred CCcCHHHHHHHh-hcccCCCceEEEE---eCCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEE
Confidence 889999999 5 68898885 4578999999999999999999999999993 32344444455 9999
Q ss_pred eCCC--ccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhhh-------------------hcC--CCccHHHHHHHHccCC
Q 013210 242 HSIS--KFISGGADIIAGAVCG-PANLVNSMMDLHQGALM-------------------LLG--PTMNPKVAFELSERIP 297 (447)
Q Consensus 242 ~S~s--K~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~-------------------~~g--~~~~~~~a~~~~~~~~ 297 (447)
+|+| |+++.+. ||+++. ++++.++++..+..... ..| ..++...+...+..++
T Consensus 179 ~S~~~~K~~~~~~---GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~ 255 (380)
T TIGR03588 179 FSFHPVKIITTAE---GGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLK 255 (380)
T ss_pred EecCCCCcccccC---ceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHH
Confidence 9987 8887532 576654 67777777654331100 011 2234444444444556
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhhcccc
Q 013210 298 HLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQNYAQ 374 (447)
Q Consensus 298 ~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~l~~~l~~~~~ 374 (447)
.+....++.+++.+++.+.|...+. .+..+.....+ .-.+..+.+.. ......+.+.|...
T Consensus 256 ~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~--------------~~~~~~i~~~~~~~~~r~~l~~~L~~~-- 319 (380)
T TIGR03588 256 KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKS--------------AWHLYPILLDQEFGCTRKEVFEALRAA-- 319 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEe--------------EEEEEEEEECCcCCCCHHHHHHHHHHC--
Confidence 6777778888889999999987754 22222100000 00133344431 12356777777653
Q ss_pred cccccccccCcccccccccccc---CCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 375 FGFMAVSLGYYETLMSCSGSST---SSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 375 ~g~~~vs~G~~~s~~~~~a~~~---~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
| |.+..... .+...|.... ....+..+. +....|++.++ ..-++++++.+.++|+++
T Consensus 320 -g-I~~~~~~~-~~~~~~~~~~~~~~~~~p~a~~----~~~~~l~lP~~-~~l~~~dv~~i~~~l~~~ 379 (380)
T TIGR03588 320 -G-IGVQVHYI-PVHLQPYYRQGFGDGDLPSAEN----FYLAEISLPLH-PALTLEQQQRVVETLRKV 379 (380)
T ss_pred -C-CCcccCCc-ccccChhhhccCCcCCCcHHHH----HHhceEEcCCC-CCCCHHHHHHHHHHHHHh
Confidence 3 44443321 1111111111 111222221 22478999999 877888888888888764
No 228
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.89 E-value=7e-21 Score=188.39 Aligned_cols=309 Identities=17% Similarity=0.210 Sum_probs=203.7
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHh-cCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC---
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 173 (447)
.+.++++++.++++.|.+.+++|+|||+|+.+++.++ +++||+|+++.++|.++...+. ..|.++++++.+
T Consensus 30 g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~~-----~~G~~~v~vd~d~~~ 104 (376)
T TIGR02379 30 GPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFV-----LRGAKIVFVDIRPDT 104 (376)
T ss_pred cHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHH-----HcCCEEEEEecCCCc
Confidence 4678999999999999999999999999999999887 7899999999999999877663 268898888764
Q ss_pred ---CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCC-CCccCCC--CeEEEeCCC--
Q 013210 174 ---DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLV-LSPARLG--ADVVVHSIS-- 245 (447)
Q Consensus 174 ---d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~-~~~~~~g--~di~~~S~s-- 245 (447)
|++++++++ +++|++|+ |+|++|...|+++|.++|++||+++|+|++|+... ++....| .|+.++||+
T Consensus 105 ~~~d~~~le~~i-~~~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~ 180 (376)
T TIGR02379 105 MNIDETLIESAI-THRTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSIGHLGTFSFHET 180 (376)
T ss_pred CCCCHHHHHHhc-CcCceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCcccCCCCCEEEEeCCCC
Confidence 788999999 77899986 67889999999999999999999999999984332 3333333 377777764
Q ss_pred ccccCCCCeeEEEEE-cChHHHHHHHHHhhhhhh---------------hcCC--CccHHHHHHHHccCCcHHHHHHHHH
Q 013210 246 KFISGGADIIAGAVC-GPANLVNSMMDLHQGALM---------------LLGP--TMNPKVAFELSERIPHLGLRMKEHC 307 (447)
Q Consensus 246 K~~g~~g~~igG~l~-~~~~~~~~l~~~~~~~~~---------------~~g~--~~~~~~a~~~~~~~~~l~~~~~~~~ 307 (447)
|.+.. |.+ ||+++ .++++.++++.++..+.. ..|. .+....|...+..++.+.+..++..
T Consensus 181 K~l~~-g~~-gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~ 258 (376)
T TIGR02379 181 KNYTS-GGE-GGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQDRL 258 (376)
T ss_pred CcCcc-cCC-ceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHHHHH
Confidence 55553 334 47665 458888888776542210 0121 1333445555556677777777778
Q ss_pred HHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCc
Q 013210 308 HRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYY 385 (447)
Q Consensus 308 ~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~ 385 (447)
+++++..+.|..+.. .+..|..+....+ .-.++++.++......++++.|... | +.+..+..
T Consensus 259 ~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~------------~~~~~~i~~~~~~~r~~l~~~L~~~---g-I~~~~~~~ 322 (376)
T TIGR02379 259 ATWQLYQDALKPLEEKGIIELPSIPNGCQH------------NAHMFYIKLKDEDDRNELIKYLKEQ---E-IMAVFHYV 322 (376)
T ss_pred HHHHHHHHHhccCCcCCeeeCCCCCCCCee------------eeEEEEEEECCcCCHHHHHHHHHHC---C-CCccccCc
Confidence 888888888876531 1222322111100 0025566665422356778888763 3 34333321
Q ss_pred ccccccccccc----CCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 386 ETLMSCSGSST----SSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 386 ~s~~~~~a~~~----~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
.+-..|.... ....+..+. +....|.|=++ ..-+++.++.+.++++++
T Consensus 323 -p~~~~~~~~~~~~~~~~~p~~~~----~~~~~l~LP~~-~~l~~~~~~~i~~~i~~~ 374 (376)
T TIGR02379 323 -PLHSSPAGRYFGRFHGEDIYTTK----ESERLVRLPLY-YGLSKEDQARVIQTICDY 374 (376)
T ss_pred -CCCcchhHHhhCCCCCCChHHHH----HHhceEEccCC-CCCCHHHHHHHHHHHHHH
Confidence 1111121000 011122111 12456777777 667778888888887654
No 229
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.89 E-value=2e-21 Score=194.25 Aligned_cols=291 Identities=15% Similarity=0.151 Sum_probs=191.6
Q ss_pred CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhc--------CCCCeEEEeCCCchhHHHHHHhhcC--c-----
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLC--------SSGGHVVAARTLYGGTHALLTHFFP--R----- 161 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~--------~~gd~Vi~~~~~y~~~~~~~~~~~~--~----- 161 (447)
.++...+++++|+++.+.+.++|++||++|+..+++... ...++|+..+..||+........-. .
T Consensus 75 ~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~ 154 (397)
T TIGR03246 75 TNEPVLRLAKKLVDATFADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGF 154 (397)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCC
Confidence 456678999999999988899999999999999998652 1235788888888876433211100 0
Q ss_pred -ccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCcccc----CHHHHHHHHHhcCCEEEEeCCCCCCCCC-----
Q 013210 162 -ACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVA----NIPELSRLAHDKGVTVVVDNTFSPLVLS----- 231 (447)
Q Consensus 162 -~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~----~l~~I~~la~~~gi~livD~~~~~~~~~----- 231 (447)
.....+..++.+|++++++.+ .+++++|++|+++++.|.+. .+++|.++|++||+++|+||+|+++...
T Consensus 155 ~~~~~~~~~~~~~d~~~l~~~l-~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a 233 (397)
T TIGR03246 155 APLPGGIKHAPYNDLAAAKALI-SDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYA 233 (397)
T ss_pred CCCCCceEEeCCCCHHHHHHHh-ccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchh
Confidence 011234567778999999999 67899999999888888664 3899999999999999999999655221
Q ss_pred ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHH
Q 013210 232 PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRAL 311 (447)
Q Consensus 232 ~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~ 311 (447)
...+++...+.+++|.+| .|.++ |++++++++++.+..... ..+..++++...++.+.+..++. .+..++++++.+
T Consensus 234 ~~~~gv~pDi~t~~K~lg-gG~pi-gav~~~~~i~~~~~~~~~-~~t~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~~~ 309 (397)
T TIGR03246 234 YMHYGVTPDILTSAKALG-GGFPI-GAMLTTTEIAAHLKVGTH-GTTYGGNPLACAVAGKVLDLVNT-PELLAGVKQRHD 309 (397)
T ss_pred hhhcCCCCCEEEeehhhh-CCcce-eEEEEcHHHHHhccCCCc-CCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Confidence 122233333446999998 57888 888889888877753322 22233444444444444433321 335677788888
Q ss_pred HHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhhcccccccccccccCccccc
Q 013210 312 IFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQNYAQFGFMAVSLGYYETLM 389 (447)
Q Consensus 312 ~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~ 389 (447)
++.+.|++.+.+. +-.. ...|.|.++.+.+.. ......+...|... |++....
T Consensus 310 ~l~~~L~~l~~~~--~~~~-------------~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~---Gv~~~~~------- 364 (397)
T TIGR03246 310 LFVDGLEKINARY--NVFS-------------EIRGKGLLIGAVLTEAYQGKAKQFVNAAAEE---GVIALIA------- 364 (397)
T ss_pred HHHHHHHHHHhcC--CCeE-------------eeecCceEEEEEEcCchhhHHHHHHHHHHHC---CeEEeec-------
Confidence 8988888754211 1000 112567788888863 23456777777652 3222111
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 390 SCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 390 ~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
..+.||+++. ...+++.++.+.++|++.
T Consensus 365 ---------------------g~~~lR~~p~-~~~t~~~i~~~~~~l~~~ 392 (397)
T TIGR03246 365 ---------------------GPNVVRFAPS-LVISDDDIDEGLARFERA 392 (397)
T ss_pred ---------------------CCCEEEEeCC-CCCCHHHHHHHHHHHHHH
Confidence 1367999888 666666666666665543
No 230
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.89 E-value=2.7e-21 Score=193.98 Aligned_cols=289 Identities=16% Similarity=0.188 Sum_probs=188.6
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhc--------CCCCeEEEeCCCchhHHHHHHhh---------cC
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLC--------SSGGHVVAARTLYGGTHALLTHF---------FP 160 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~--------~~gd~Vi~~~~~y~~~~~~~~~~---------~~ 160 (447)
.+...+++++|+++.+.+.++|++||++|+..+++... ...++|+..+..||+........ ..
T Consensus 81 ~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~ 160 (403)
T PRK05093 81 NEPALRLAKKLIDATFAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFG 160 (403)
T ss_pred CHHHHHHHHHHHhhCCCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCC
Confidence 45567899999999888899999999999999998542 12357888888888865322111 10
Q ss_pred cccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCCc----
Q 013210 161 RACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLSP---- 232 (447)
Q Consensus 161 ~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~~---- 232 (447)
. ....+..++.+|++++++.+ .+++++|++|+++++.|.+.+ +++|.++|++||+++|+||+|+++....
T Consensus 161 ~-~~~~~~~~~~~d~~~l~~~l-~~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~ 238 (403)
T PRK05093 161 P-KPADITHVPFNDLAAVKAVI-DDHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFA 238 (403)
T ss_pred C-CCCCcEEeCCCCHHHHHHHh-cCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchh
Confidence 1 12345667778999999999 778999999955544454433 8999999999999999999996653321
Q ss_pred -cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHH
Q 013210 233 -ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRAL 311 (447)
Q Consensus 233 -~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~ 311 (447)
...+.+..+.|++|.++ +|.|+ |++++++++++.+....... +..++.+.+.++..++..+. ..+..++++++++
T Consensus 239 ~~~~~~~pdi~s~sK~l~-~G~ri-g~vv~~~~i~~~l~~~~~~~-t~~~~~~~~~aa~a~L~~~~-~~~~~~~~~~~~~ 314 (403)
T PRK05093 239 YMHYGVTPDILTSAKALG-GGFPI-GAMLTTAEIASHFKVGTHGS-TYGGNPLACAVAEAVFDIIN-TPEVLEGVKARRQ 314 (403)
T ss_pred hhhcCCCCCEEEeccccc-CCcce-EEEEEcHHHHhhcCCCCCCC-CCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHH
Confidence 12233333567999999 78998 99999999888776432211 12333333433344333332 2335577888899
Q ss_pred HHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhcccccccccccccCccccc
Q 013210 312 IFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQNYAQFGFMAVSLGYYETLM 389 (447)
Q Consensus 312 ~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~ 389 (447)
++.+.|++++..... ... ..+.|.++++.++.. .....|...|... |+ .+..+
T Consensus 315 ~l~~~L~~~~~~~~~--~~~-------------~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~---Gv-~v~~~------ 369 (403)
T PRK05093 315 RFVDGLQKINQKYGV--FSE-------------IRGMGLLIGAELKPQYKGRARDFLNAAAEE---GV-MVLVA------ 369 (403)
T ss_pred HHHHHHHHHHhhCCC--eEe-------------EeeCceEEEEEecCcchhHHHHHHHHHHHC---Ce-EEecC------
Confidence 999999876321110 000 114677999998642 2456777777652 32 22111
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 390 SCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 390 ~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
..+.+||+++ ...+++.++.+.+.|+++
T Consensus 370 ---------------------g~~~lRl~~~-~~~~~~~i~~~~~~l~~~ 397 (403)
T PRK05093 370 ---------------------GPDVLRFAPS-LVIEEADIDEGLARFEKA 397 (403)
T ss_pred ---------------------CCCEEEEeCC-CCCCHHHHHHHHHHHHHH
Confidence 1367999988 655566666666665544
No 231
>PRK04311 selenocysteine synthase; Provisional
Probab=99.89 E-value=1.6e-21 Score=195.96 Aligned_cols=239 Identities=21% Similarity=0.158 Sum_probs=171.1
Q ss_pred HHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchh---
Q 013210 74 ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGG--- 150 (447)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~--- 150 (447)
+.+.+++... .|.......++.+ ..+..+++.+|+++|++.++++++|+.|+++++.+ +.+||+||++..+|..
T Consensus 104 eav~~~~~~~-~~le~~l~~g~~g-~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e~~~~gg 180 (464)
T PRK04311 104 EAVTEAARGY-SNLEYDLATGKRG-SRDRALAALLCALTGAEDALVVNNNAAAVLLALNA-LAAGKEVIVSRGELVEIGG 180 (464)
T ss_pred HHHHHHHhcc-cccccchhhcccc-hHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHH-hCCCCEEEEcchhhhhcCc
Confidence 6666665542 2222111113323 44679999999999999999999999999998865 5789999999876542
Q ss_pred HHHHHHhhcCcccCeeEEEeCC---CCHHHHHHhhccCCceEEEEEcCCCC--Cc--cccCHHHHHHHHHhcCCEEEEeC
Q 013210 151 THALLTHFFPRACNITTTFVDI---SDHEMVNSAIVQGRTKVLYFESISNP--TL--AVANIPELSRLAHDKGVTVVVDN 223 (447)
Q Consensus 151 ~~~~~~~~~~~~~g~~~~~v~~---~d~~~l~~~i~~~~t~lV~i~~~~Np--tG--~v~~l~~I~~la~~~gi~livD~ 223 (447)
... +...+.+ .|+++++++. .+++++++++ +++|++|++++++|+ +| .+.|+++|+++||+||+++++|+
T Consensus 181 s~~-i~~~~~~-~G~~l~~v~~~~~t~~~dle~aI-~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~ 257 (464)
T PRK04311 181 AFR-IPDVMRQ-AGARLVEVGTTNRTHLRDYEQAI-NENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDL 257 (464)
T ss_pred chh-hHHHHHH-CCcEEEEECCCCCCCHHHHHHhc-CccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEEC
Confidence 222 2223334 7999998876 3789999999 889999999999998 34 67899999999999999999999
Q ss_pred CCCCC-------------CCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhh-hhhhcCCCccHHHH
Q 013210 224 TFSPL-------------VLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQG-ALMLLGPTMNPKVA 289 (447)
Q Consensus 224 ~~~~~-------------~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~-~~~~~g~~~~~~~a 289 (447)
..+.+ ..++.++|+|++++|++|++|||. +|+++++++++++++...-. .....+.++++..+
T Consensus 258 gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~---~G~i~g~~~li~~l~~~~~~r~lr~dk~~l~~l~~ 334 (464)
T PRK04311 258 GSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQ---AGIIVGKKELIARLKKHPLKRALRVDKLTLAALEA 334 (464)
T ss_pred CCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCc---eEEEEEcHHHHHHHhhchhHHHHhcchHHHHHHHH
Confidence 53211 123456799999999999999874 59999999998877631110 11122444444444
Q ss_pred HHH-----------HccCCcHHHHHHHHHHHHHHHHHHHHhCC
Q 013210 290 FEL-----------SERIPHLGLRMKEHCHRALIFARRMKKLG 321 (447)
Q Consensus 290 ~~~-----------~~~~~~l~~~~~~~~~~~~~l~~~L~~~~ 321 (447)
++. +..++.+..+++++.++++.++++|+.+.
T Consensus 335 ~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~ 377 (464)
T PRK04311 335 TLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAAL 377 (464)
T ss_pred HHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhcc
Confidence 332 22233366788899999999999998864
No 232
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.88 E-value=5.5e-20 Score=182.65 Aligned_cols=309 Identities=14% Similarity=0.146 Sum_probs=202.9
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHh-cCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC---
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 173 (447)
.+.++++++.+++++|.+.+++|+||++|+.+++.++ +++||+|+++.++|.++...+. ..|.++++++.+
T Consensus 30 ~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~-----~~G~~~v~~d~d~~~ 104 (375)
T PRK11706 30 GGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFV-----LRGAKIVFVDIRPDT 104 (375)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHH-----HcCCEEEEEecCCCc
Confidence 4567899999999999999999999999999988766 6899999999999999987763 368888888754
Q ss_pred ---CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCC-CCccCC--CCeEEEeCCC--
Q 013210 174 ---DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLV-LSPARL--GADVVVHSIS-- 245 (447)
Q Consensus 174 ---d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~-~~~~~~--g~di~~~S~s-- 245 (447)
|++++++++ ++++++|++. |++|...++++|.++|+++|+++|+|++|+... ++.... ..|+.++|++
T Consensus 105 ~~~d~~~le~~i-~~~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~ 180 (375)
T PRK11706 105 MNIDETLIEAAI-TPKTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHET 180 (375)
T ss_pred CCcCHHHHHHhc-CCCCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCCC
Confidence 789999999 7789999864 579999999999999999999999999994332 332222 2578888887
Q ss_pred ccccCCCCeeEEEEEcChHHHHHHHHHhhhhh---------------hhcCCC--ccHHHHHHHHccCCcHHHHHHHHHH
Q 013210 246 KFISGGADIIAGAVCGPANLVNSMMDLHQGAL---------------MLLGPT--MNPKVAFELSERIPHLGLRMKEHCH 308 (447)
Q Consensus 246 K~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~---------------~~~g~~--~~~~~a~~~~~~~~~l~~~~~~~~~ 308 (447)
|.++. |.+ |++++.++++.++++..+.... ...|.+ +....|...+..++.+....++.++
T Consensus 181 K~l~~-g~g-G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~ 258 (375)
T PRK11706 181 KNYTA-GEG-GALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAADRINQRRLA 258 (375)
T ss_pred ccccc-cCC-eEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99975 543 3566677888887776553210 011222 2334455555556666667777778
Q ss_pred HHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCcc
Q 013210 309 RALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYE 386 (447)
Q Consensus 309 ~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~ 386 (447)
+.+++.+.|...+. .+..|..+... .....++++.++.......+.+.|...+ +.++... .
T Consensus 259 ~~~~~~~~L~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~r~~l~~~L~~~g----I~~~~~~-~ 321 (375)
T PRK11706 259 LWQRYYDALAPLAEAGRIELPSIPDDC------------KHNAHMFYIKLRDLEDRSALINFLKEAG----IMAVFHY-I 321 (375)
T ss_pred HHHHHHHHhcCCCcCCeeecCCCCCCC------------ceeeEEEEEEECCcCCHHHHHHHHHHCC----CCccccC-C
Confidence 88888888876541 12222211100 0112266677764334567888887633 4444332 1
Q ss_pred cccccccccc----CCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 387 TLMSCSGSST----SSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 387 s~~~~~a~~~----~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
.+..+|.... ....+..+.. ....|-+-++ ..-++++++.+.++|+++
T Consensus 322 p~~~~~~~~~~~~~~~~~p~a~~~----~~~~l~lP~~-~~l~~~~~~~i~~~i~~~ 373 (375)
T PRK11706 322 PLHSSPAGERFGRFHGEDRYTTKE----SERLLRLPLF-YNLTDVEQRTVIDTILEF 373 (375)
T ss_pred ccCcchhhHhcCCCCCCChHHHHH----HhCcEeccCC-CCCCHHHHHHHHHHHHHH
Confidence 2211222111 0122222221 2355666666 555667777777777654
No 233
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.88 E-value=6.1e-21 Score=191.50 Aligned_cols=254 Identities=17% Similarity=0.147 Sum_probs=166.3
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC----------CCCeEEEeCCCchhHHHHHHhhcCc------
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCS----------SGGHVVAARTLYGGTHALLTHFFPR------ 161 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~----------~gd~Vi~~~~~y~~~~~~~~~~~~~------ 161 (447)
.+..+.+++.++++.+.+.++|++||++|+..+++.+.. .+++|++.+..|++...........
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~ 151 (400)
T PTZ00125 72 NDVLGLAEKYITDLFGYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNN 151 (400)
T ss_pred CHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhcc
Confidence 567789999999999988999999999999999986631 2468999998888765433111100
Q ss_pred --ccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCC----
Q 013210 162 --ACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLS---- 231 (447)
Q Consensus 162 --~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~---- 231 (447)
.....+..++..|+++|+++++.+++++|++++++||+|.+.| +++|.++|++||+++|+||+|+++...
T Consensus 152 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~ 231 (400)
T PTZ00125 152 FGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLL 231 (400)
T ss_pred CCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh
Confidence 0011234556679999999994367999999999999999987 999999999999999999999655321
Q ss_pred -c--cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHH
Q 013210 232 -P--ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCH 308 (447)
Q Consensus 232 -~--~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~ 308 (447)
. .....|+++ ++|.+++++.++ |+++.++++++.+..... ..+..++...+.++...+..+.. ....++..+
T Consensus 232 ~~~~~~~~pd~~~--~sK~l~~g~~~i-g~v~~~~~~~~~~~~~~~-~~t~~~~~~~~~aa~~~l~~i~~-~~~~~~~~~ 306 (400)
T PTZ00125 232 AHDHEGVKPDIVL--LGKALSGGLYPI-SAVLANDDVMLVIKPGEH-GSTYGGNPLACAVAVEALEVLKE-EKLAENAQR 306 (400)
T ss_pred HHHhcCCCCCEEE--EcccccCCCcCc-EEEEEcHHHHhhccCCCC-CCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHH
Confidence 1 122356665 679999755588 899999998887754322 11223333333333332322211 112344555
Q ss_pred HHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhhc
Q 013210 309 RALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQN 371 (447)
Q Consensus 309 ~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~l~~~l~~ 371 (447)
+.+++.+.|++.-.. ++.... ..+.|.++++.++. ......+.+.|..
T Consensus 307 ~~~~l~~~l~~l~~~--~~~~~~-------------~~~~g~~~~v~~~~~~~~~~~~~~~~l~~ 356 (400)
T PTZ00125 307 LGEVFRDGLKELLKK--SPWVKE-------------IRGKGLLNAIVFDHSDGVNAWDLCLKLKE 356 (400)
T ss_pred HHHHHHHHHHHHHhc--CCCeEE-------------EecccEEEEEEEccCcchHHHHHHHHHHH
Confidence 666777777653100 010000 01457788888863 2345667777764
No 234
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.88 E-value=9e-21 Score=192.94 Aligned_cols=291 Identities=16% Similarity=0.209 Sum_probs=195.8
Q ss_pred chHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhc-CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC--
Q 013210 99 PTVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLC-SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-- 173 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-- 173 (447)
..+.++++.+++++|.+ .+++|+||++++.+++.++. .+||+|+++++.|+++...+..+... .|.+++.++.+
T Consensus 112 ~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~-~G~~~~~v~~~~~ 190 (447)
T PRK00451 112 QAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKG-QGIEVVEVPYEDG 190 (447)
T ss_pred HHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHh-CCcEEEEecCCCC
Confidence 34556667889999975 47899999999999888874 78999999999999988887544433 68898888875
Q ss_pred --CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEE--eCCCCCCCCCccCCCCeEEEeCCCcc--
Q 013210 174 --DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV--DNTFSPLVLSPARLGADVVVHSISKF-- 247 (447)
Q Consensus 174 --d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~liv--D~~~~~~~~~~~~~g~di~~~S~sK~-- 247 (447)
|++++++++ +++|++|++++| |+||.+.|+++|+++|+++|+++++ |.+..+....+.++++|+++.|.+|+
T Consensus 191 ~~d~~~l~~~i-~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~~g~~~~~~~~~~D~~~~s~~k~~~ 268 (447)
T PRK00451 191 VTDLEALEAAV-DDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPVSLGLLKPPGEYGADIVVGEGQPLGI 268 (447)
T ss_pred CCCHHHHHHhc-CCCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChHHhccCCCcccCCCCEEEECCCcCCC
Confidence 899999999 788999999998 8999999999999999999999998 64443333345677999999977665
Q ss_pred -ccCCCCeeEEEEEcChHHHHHHHH-------------------------Hhhhh-hhhcCCCc-cH-HHHHHHHc--cC
Q 013210 248 -ISGGADIIAGAVCGPANLVNSMMD-------------------------LHQGA-LMLLGPTM-NP-KVAFELSE--RI 296 (447)
Q Consensus 248 -~g~~g~~igG~l~~~~~~~~~l~~-------------------------~~~~~-~~~~g~~~-~~-~~a~~~~~--~~ 296 (447)
+...|.++ |+++.++++++.+.. .+... ....+... .+ .+++..+. ..
T Consensus 269 ~~~~~Gpg~-G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~ 347 (447)
T PRK00451 269 PLSFGGPYL-GFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGP 347 (447)
T ss_pred CCCCCCCCc-hHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCH
Confidence 22223345 999888888776310 00000 00111111 11 22222222 22
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccc
Q 013210 297 PHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQF 375 (447)
Q Consensus 297 ~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~ 375 (447)
..+.+..+++.++++++.+.|++++. ++. ++ + ...++.+.++. ...++.++|...
T Consensus 348 ~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~----~--------------~~~~~~v~~~~--~~~~~~~~L~~~--- 403 (447)
T PRK00451 348 EGLRELAEQNHQKAHYLAERLAEIGGVELF-DG----P--------------FFNEFVVRLPK--PAEEVNEALLEK--- 403 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCEEec-CC----C--------------eEEEEEEecCC--CHHHHHHHHHhc---
Confidence 33666778889999999999998753 443 21 0 01133455531 245677777652
Q ss_pred ccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 376 GFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 376 g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
|+++ .+- ..... .+. .+.+|+|++ ..++++.++.|.++|+++
T Consensus 404 gi~~-~~~---------~~~~~----------~~~-~~~~rvs~~-~~~t~e~i~~l~~~L~~~ 445 (447)
T PRK00451 404 GILG-GYD---------LGRYY----------PEL-GNHLLVCVT-EKRTKEDIDALVAALGEV 445 (447)
T ss_pred CCCC-Ccc---------ccccc----------CCc-CCEEEEecC-CCCCHHHHHHHHHHHHHH
Confidence 2221 110 00000 011 368999999 889999999999999875
No 235
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.88 E-value=3e-20 Score=174.01 Aligned_cols=311 Identities=19% Similarity=0.177 Sum_probs=208.8
Q ss_pred ccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEE
Q 013210 63 EASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVV 142 (447)
Q Consensus 63 ~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi 142 (447)
.+|.|..-+.++.++.+.+... .....|| .++..+++++++++++|.+.++|++|||+||..+|.+.+++|..|+
T Consensus 4 f~SDn~~g~~~~m~eam~~a~~---~~~~~YG--~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~~~~~vi 78 (342)
T COG2008 4 FRSDNVAGPTPEMREALAAANA---VGDDVYG--EDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQPGESVI 78 (342)
T ss_pred cccCccCCCCHHHHHHHHhccc---cCCCCCC--CCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcCCCCeEE
Confidence 4677887777777776665542 2234566 4788899999999999999999999999999999999999999999
Q ss_pred EeCCCchhHHHHHH-hhcCcccCeeEEEeCCC----CHHHHHHhhccC-----CceEEEEEcCCCCCccccCH---HHHH
Q 013210 143 AARTLYGGTHALLT-HFFPRACNITTTFVDIS----DHEMVNSAIVQG-----RTKVLYFESISNPTLAVANI---PELS 209 (447)
Q Consensus 143 ~~~~~y~~~~~~~~-~~~~~~~g~~~~~v~~~----d~~~l~~~i~~~-----~t~lV~i~~~~NptG~v~~l---~~I~ 209 (447)
+....|-..++.-. .++. .+.+...++.. ++++|++.++.+ .+.++++++..|+.|+++|+ ++|.
T Consensus 79 ~~~~aHi~~~E~Ga~~~~~--~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~ 156 (342)
T COG2008 79 CHETAHIYTDECGAPEFFG--GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAIS 156 (342)
T ss_pred EeccccceecccCcHHHHc--CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHH
Confidence 99988765443321 1111 13344444422 899999987432 46788888877899999984 5778
Q ss_pred HHHHhcCCEEEEeCCC-C----CCCCCc--cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCC
Q 013210 210 RLAHDKGVTVVVDNTF-S----PLVLSP--ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGP 282 (447)
Q Consensus 210 ~la~~~gi~livD~~~-~----~~~~~~--~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~ 282 (447)
++||++|+.+|+|.+- . .+..+. ...++|++++++||..+.++ |.+|+++.+++++++.++. ..|.
T Consensus 157 ~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK----~~Gg 229 (342)
T COG2008 157 AVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRK----RAGG 229 (342)
T ss_pred HHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCccee---eeEEEcCHHHHHHHHHHHH----Hhcc
Confidence 8899999999999884 1 111111 12389999999999999874 4667899999999988877 4555
Q ss_pred CccHH--HHHHHHccCCcHHHHHHHHH--HHHHHHHHHHHhC-CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 283 TMNPK--VAFELSERIPHLGLRMKEHC--HRALIFARRMKKL-GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 283 ~~~~~--~a~~~~~~~~~l~~~~~~~~--~~~~~l~~~L~~~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
.+++. .+...+..+++-..+..... +.+.+|++.|... |.++..|. ..+++-+.++
T Consensus 230 l~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~-------------------~tN~vf~~l~ 290 (342)
T COG2008 230 LMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPV-------------------ETNMVFVRLP 290 (342)
T ss_pred cHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCC-------------------cccEEEEECC
Confidence 44432 12222222233222333333 4489999999855 66777663 1237778876
Q ss_pred CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCC--CeEEEEeCCCCCHHHHHHHHHHH
Q 013210 358 TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISA--GLVRMSVGYLGTLDQRWSQFEKA 435 (447)
Q Consensus 358 ~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~--~~iRiS~g~~~~~~~~i~~l~~a 435 (447)
... . +.+...+ ...-.| ..++. ..+|+-.. ..++++.++++...
T Consensus 291 ~~~-i----~~l~~~~----~~~~~~------------------------~~~~~~~~~vRfvts-~a~~~edv~~~~~~ 336 (342)
T COG2008 291 ESA-I----EALRLAG----ALFYRG------------------------VLIGAHGEIVRFVTS-WATSEEDVDELVAA 336 (342)
T ss_pred hHH-H----HHHHhhc----hhheee------------------------eeccCCCceEEEEee-ccCCHHHHHHHHHH
Confidence 432 1 2222110 000111 00111 36999999 99999999999888
Q ss_pred HHHhh
Q 013210 436 LSRMQ 440 (447)
Q Consensus 436 l~~~~ 440 (447)
++++.
T Consensus 337 ~~~~~ 341 (342)
T COG2008 337 IKALL 341 (342)
T ss_pred HHHhh
Confidence 87753
No 236
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.88 E-value=6e-20 Score=172.55 Aligned_cols=227 Identities=19% Similarity=0.193 Sum_probs=167.7
Q ss_pred HHHHHHHHHHhC----------CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 102 LNLSRQMAALEG----------TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 102 ~~l~~~ia~l~g----------~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
..+++.+|++.. .+++++++|+|.|++.+...|+.|||..+++.|.|+++-.-+.. + .|++++.|.
T Consensus 124 ~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~---r-Tgveivpv~ 199 (471)
T KOG0256|consen 124 PSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRW---R-TGVEIVPVH 199 (471)
T ss_pred hHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCccccccee---c-cCceEEEEE
Confidence 468888888862 35699999999999999999999999999999999998655521 3 588877765
Q ss_pred CC-------CHHHHHHhhcc-----CCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCcc---
Q 013210 172 IS-------DHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSPA--- 233 (447)
Q Consensus 172 ~~-------d~~~l~~~i~~-----~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~~--- 233 (447)
.. +.+++|+++++ .+++.|++.+|+||.|++.+ +..+..+|.++++.+|+||+|+.-.++-.
T Consensus 200 c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~ 279 (471)
T KOG0256|consen 200 CSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFR 279 (471)
T ss_pred eecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCce
Confidence 43 68888887732 46889999999999999987 55667778899999999999954433211
Q ss_pred -----------CCCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhhhhcCC-CccHHHHHHHHccCCc--
Q 013210 234 -----------RLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGALMLLGP-TMNPKVAFELSERIPH-- 298 (447)
Q Consensus 234 -----------~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~~~g~-~~~~~~a~~~~~~~~~-- 298 (447)
..+..-++.|+||-+|.||.|+ |+++. ++++.....+... .... +..+.....++.. ++
T Consensus 280 Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRv-GviYS~ne~VvsaA~kmss----f~~vSs~tQ~~la~LLSD-~~f~ 353 (471)
T KOG0256|consen 280 SVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRV-GVIYSNNEDVVSAATKMSS----FGLVSSQTQYLLASLLSD-EEFT 353 (471)
T ss_pred EHHHHhhccccCCCcEEEEEEeccccCCCceEE-EEEEecChHHHHHHHHHhh----ccCCcHHHHHHHHHHhch-HHHH
Confidence 2245578899999999999999 88876 5666766666554 2222 2223333333333 32
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 299 ---LGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 299 ---l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
+.+..++++.+..++.+.|++.++..... +.|.++|+.+.
T Consensus 354 ~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s-------------------~AGlF~wvDlr 396 (471)
T KOG0256|consen 354 REYLRENNKRLRIRHRYIVEGLKALGIPCLKS-------------------NAGLFCWVDLR 396 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHhcCCceeec-------------------CCeeEEEEEhH
Confidence 45667778888899999999988754421 46778999875
No 237
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.88 E-value=4.2e-20 Score=178.34 Aligned_cols=323 Identities=20% Similarity=0.262 Sum_probs=215.2
Q ss_pred HHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHh-cCCCCeEEEeCCCchhH
Q 013210 73 PETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQL-CSSGGHVVAARTLYGGT 151 (447)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l-~~~gd~Vi~~~~~y~~~ 151 (447)
.+.+.+.++..| ++. .+.+.++|+.+|+++|+..++.++|||.|+.++++++ +.+||.||++..+|..+
T Consensus 18 ~~~v~~vl~sg~--------i~~--G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvAT 87 (374)
T COG0399 18 LAAVQEVLKSGW--------LTG--GPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVAT 87 (374)
T ss_pred HHHHHHHHHcCC--------eec--ChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHH
Confidence 366666665432 222 5678999999999999999999999999999999966 68999999999999998
Q ss_pred HHHHHhhcCcccCeeEEEeCCC------CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC
Q 013210 152 HALLTHFFPRACNITTTFVDIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 152 ~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~ 225 (447)
.+.+. +.|.+++++|.+ |++.||++| +++||+|+.. +-.|...|+++|.++|++||+++|.|++|
T Consensus 88 an~i~-----~~Ga~PVFvDid~~T~nid~~~ie~aI-t~~tKAIipV---hl~G~~~dm~~i~~la~~~~l~vIEDaAq 158 (374)
T COG0399 88 ANAVL-----LVGAKPVFVDIDPDTLNIDPDLIEAAI-TPRTKAIIPV---HLAGQPCDMDAIMALAKRHGLPVIEDAAQ 158 (374)
T ss_pred HHHHH-----HcCCeEEEEecCCcccCCCHHHHHHHc-ccCCeEEEEe---hhccCCCCHHHHHHHHHHcCCeEEEEcch
Confidence 88772 379999999987 899999999 8889999854 44688899999999999999999999998
Q ss_pred -CCCCCCccCCC--CeEEEeCC--CccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhhhh----------cC--CCccHH
Q 013210 226 -SPLVLSPARLG--ADVVVHSI--SKFISGGADIIAGAVCG-PANLVNSMMDLHQGALML----------LG--PTMNPK 287 (447)
Q Consensus 226 -~~~~~~~~~~g--~di~~~S~--sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~~----------~g--~~~~~~ 287 (447)
.+-.+.....| -|+.++|| +|.+.- |. ||+++. ++++.++++.++.++... .| ..+.-.
T Consensus 159 a~Ga~y~gk~vGt~Gd~~~fSF~~~K~itt-gE--GGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~i 235 (374)
T COG0399 159 AHGATYKGKKVGSFGDIGAFSFHATKNLTT-GE--GGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEI 235 (374)
T ss_pred hccCeecCcccccccceEEEEecCCCCccc-cC--ceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHH
Confidence 33334433333 36666666 699884 32 577755 678888887665533211 22 224445
Q ss_pred HHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-HHHHHHH
Q 013210 288 VAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-EKANRLM 366 (447)
Q Consensus 288 ~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-~~~~~l~ 366 (447)
.|+..+..++.+++..++.++.++.+.+.|++.+. +..|..+..-.|.+ .+..+.++.. ..-+.++
T Consensus 236 qAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~-~~~p~~~~~~~~~~------------~~~~i~~~~~~~~R~~l~ 302 (374)
T COG0399 236 QAAIGLAQLERLDEINERRREIAQIYAEALKGLPG-ITLPPEPDGAVHAW------------HLYTILVDEEGISRDALM 302 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-ccccCCCCCceeee------------eeeEEEecCCCCCHHHHH
Confidence 56666667777888888888888888888887753 12221111000000 1444445432 3346777
Q ss_pred HHhhcccccccccccccCccccccccccccC-----CCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 367 NYLQNYAQFGFMAVSLGYYETLMSCSGSSTS-----SELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 367 ~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~-----~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
..|+.. | +. .......+..++..... ..++..+. +....+++=+. ..-+++.++.+.++|+++-
T Consensus 303 ~~L~~~---g-i~-~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~----~~~r~l~LP~~-p~l~~~~~~~V~~~l~~~~ 371 (374)
T COG0399 303 ESLKEA---G-VG-AVVYFRPLHLQPAYRQLGYFPEGDLPNAED----LSERILSLPLH-PNLSEEDVDRVIEALKEVL 371 (374)
T ss_pred HHHHhC---C-CC-ceEEeeccccchhhhcccccccCCCchHHH----HhhCeEEccCC-CCCCHHHHHHHHHHHHHHh
Confidence 788763 2 22 11111112111111110 12222222 12456788777 7777777888877777653
No 238
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.88 E-value=1.5e-20 Score=188.58 Aligned_cols=254 Identities=17% Similarity=0.141 Sum_probs=167.8
Q ss_pred CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhc--------CCCCeEEEeCCCchhHHHHHHhhcCc--c----
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLC--------SSGGHVVAARTLYGGTHALLTHFFPR--A---- 162 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~--------~~gd~Vi~~~~~y~~~~~~~~~~~~~--~---- 162 (447)
.++...+++++|+++.+.+.++|++||++|+..+++... ...++|+..+..||+........-.. .
T Consensus 79 ~~~~~~~la~~l~~~~~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~ 158 (406)
T PRK12381 79 TNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDF 158 (406)
T ss_pred CCHHHHHHHHHHHhhCCCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCC
Confidence 456668899999999888899999999999999998642 13467999999998876432111000 0
Q ss_pred --cCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccc-c----CHHHHHHHHHhcCCEEEEeCCCCCCCCCc---
Q 013210 163 --CNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAV-A----NIPELSRLAHDKGVTVVVDNTFSPLVLSP--- 232 (447)
Q Consensus 163 --~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v-~----~l~~I~~la~~~gi~livD~~~~~~~~~~--- 232 (447)
.-..+..++.+|++++++.+ .+++++|++|. .|++|-+ . .+++|.++|++||+++|+||+|+++....
T Consensus 159 ~~~~~~~~~~~~~d~~~l~~~l-~~~~aaviiEP-v~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~ 236 (406)
T PRK12381 159 APLPPDIRHAAYNDLNSASALI-DDQTCAVIVEP-IQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELY 236 (406)
T ss_pred CCCCCCeeEeCCCCHHHHHHhc-cCCeeEEEEeC-CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchh
Confidence 00124556667999999999 67899999985 4555543 2 38899999999999999999996553221
Q ss_pred --cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHH
Q 013210 233 --ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRA 310 (447)
Q Consensus 233 --~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~ 310 (447)
...+++..+.|++|.++ +|.++ |++++++++++.+..... ..+..++++.+.++...+..+. .....++++++.
T Consensus 237 ~~~~~~v~pDi~t~sK~l~-gG~~i-g~~~~~~~~~~~~~~~~~-~~t~~~~pl~~aaa~a~l~~l~-~~~~~~~~~~~~ 312 (406)
T PRK12381 237 AYMHYGVTPDVLTTAKALG-GGFPI-GAMLTTEKCASVMTVGTH-GTTYGGNPLASAVAGKVLELIN-TPEMLNGVKQRH 312 (406)
T ss_pred hhHhhCCCCCEEEehhhhh-CCCce-EEEEEcHHHHhhcCCCCC-CCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHH
Confidence 11233222457999999 57898 888899998887754322 1223344444444444333332 223567778888
Q ss_pred HHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhc
Q 013210 311 LIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQN 371 (447)
Q Consensus 311 ~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~l~~~l~~ 371 (447)
+++.+.|++.+.+. +... ...|.|.++++.+... ..+..+...+..
T Consensus 313 ~~l~~~L~~l~~~~--~~~~-------------~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~ 360 (406)
T PRK12381 313 DWFVERLNTINARY--GLFS-------------EIRGLGLLIGCVLNAEYAGKAKQISQEAAK 360 (406)
T ss_pred HHHHHHHHHHHhhC--CCEE-------------EEecCeEEEEEEecCchhhHHHHHHHHHHH
Confidence 88888887753211 1000 1125778999998742 245667777765
No 239
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.87 E-value=3e-20 Score=185.29 Aligned_cols=220 Identities=17% Similarity=0.141 Sum_probs=155.9
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC-----
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI----- 172 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~----- 172 (447)
.+...+||+.+++++|.+.+++|+||++|+..++++++++||.| ++++.|..+...+. ..|..+++++.
T Consensus 52 ~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~-----~~Ga~pv~v~i~~~~~ 125 (431)
T cd00617 52 SKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHIE-----ANGAVPVDLVIDEAHD 125 (431)
T ss_pred CCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHH-----hCCCEeEEEecccccc
Confidence 44567999999999999999999999999999999999999977 68888888776552 25666666544
Q ss_pred ----------CCHHHHHHhhccCC----ceEEEEEcCCCCC-ccccC---HHHHHHHHHhcCCEEEEeCCCC-C---CC-
Q 013210 173 ----------SDHEMVNSAIVQGR----TKVLYFESISNPT-LAVAN---IPELSRLAHDKGVTVVVDNTFS-P---LV- 229 (447)
Q Consensus 173 ----------~d~~~l~~~i~~~~----t~lV~i~~~~Npt-G~v~~---l~~I~~la~~~gi~livD~~~~-~---~~- 229 (447)
.|+++|++++ +++ +++|+++.|+||+ |.+.+ +++|.++|++||+++|.|+++. . +.
T Consensus 126 ~~~~~pf~gniD~e~Le~~I-~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~ 204 (431)
T cd00617 126 AQELIPFKGNIDVAKLEKLI-DEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIK 204 (431)
T ss_pred cccccCCCCCcCHHHHHHHh-CcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhh
Confidence 2789999999 543 8899999999998 88875 5678999999999999999962 1 10
Q ss_pred -----C---CccC------CCCeEEEeCCCccccCCCCeeEEEEEcCh-HHHHHHHHHhh---hhhhhcCCCccHHHHHH
Q 013210 230 -----L---SPAR------LGADVVVHSISKFISGGADIIAGAVCGPA-NLVNSMMDLHQ---GALMLLGPTMNPKVAFE 291 (447)
Q Consensus 230 -----~---~~~~------~g~di~~~S~sK~~g~~g~~igG~l~~~~-~~~~~l~~~~~---~~~~~~g~~~~~~~a~~ 291 (447)
+ ++.+ ...|.++.|++|..+.+ +||++++++ +++++++.... +.....|.+.....|.+
T Consensus 205 ~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~---~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A 281 (431)
T cd00617 205 EREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVN---IGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALA 281 (431)
T ss_pred cccccccCCCHHHHHHHhhccCCEEEEEeecCCCCc---cceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHH
Confidence 1 1111 13688888888877754 579999876 58888775321 11111222222333322
Q ss_pred -HHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 013210 292 -LSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPG 328 (447)
Q Consensus 292 -~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~ 328 (447)
.+..... ...+++..+++++|.+.|++.|+.+..|.
T Consensus 282 ~gL~e~~~-~~~l~~~~~~r~~l~~~L~~~G~~v~~P~ 318 (431)
T cd00617 282 QGLREAVE-EDYLRHRVEQVRYLGDRLDEAGVPIVEPA 318 (431)
T ss_pred HHHHhccc-HHHHHHHHHHHHHHHHHHHHCCCCccCCC
Confidence 2222112 23455555567899999999988766554
No 240
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.87 E-value=3.6e-20 Score=184.46 Aligned_cols=283 Identities=14% Similarity=0.175 Sum_probs=183.5
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhc-CCC-CeEEEeCCCchhHHHHHHhhcCc---c-----cCeeE
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLC-SSG-GHVVAARTLYGGTHALLTHFFPR---A-----CNITT 167 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~-~~g-d~Vi~~~~~y~~~~~~~~~~~~~---~-----~g~~~ 167 (447)
++...++.+.+++..+.+.++|++||++|+..+++... .+| ++|++.++.||+........... . ....+
T Consensus 70 ~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (377)
T PRK02936 70 NSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGF 149 (377)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCc
Confidence 45566777777777666789999999999999998542 244 57999988888654222111000 0 01134
Q ss_pred EEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----cCCC--
Q 013210 168 TFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLSP-----ARLG-- 236 (447)
Q Consensus 168 ~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~~-----~~~g-- 236 (447)
.+++.+|++++++.+ .+++++|++|+++++.|.+.+ +++|.++|++||+++|+||+|+++.... ...+
T Consensus 150 ~~~~~~d~~~l~~~~-~~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~ 228 (377)
T PRK02936 150 THVPFNDIKALKEVM-NEEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLD 228 (377)
T ss_pred eEeCCCCHHHHHHhc-cCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCC
Confidence 556667999999999 778999999999999987753 8999999999999999999996553321 1123
Q ss_pred CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH
Q 013210 237 ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARR 316 (447)
Q Consensus 237 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~ 316 (447)
.|+ .+++|.++ +|.++ |++++++++.+.+..... ..+..++.+.+.++..++..+. ....++++.++.+++.+.
T Consensus 229 ~di--~t~sK~l~-~G~~i-g~v~~~~~~~~~~~~~~~-~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~ 302 (377)
T PRK02936 229 PDI--VTVAKGLG-NGIPV-GAMIGKKELGTAFGPGSH-GSTFGGNPLAMAAAKEVLQVIK-QPSFLEEVQEKGEYFLQK 302 (377)
T ss_pred CcE--EEEccccc-CCCcc-EEEEEcHHHHhhccCCCC-CCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHH
Confidence 354 46999999 78888 899999998887753322 1122334444444444443331 123456677778888888
Q ss_pred HHhC-C-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCcccccccccc
Q 013210 317 MKKL-G-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGS 394 (447)
Q Consensus 317 L~~~-~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~ 394 (447)
|++. + .....+ ..+.|.++++.++.. ...+.+.|... |++. ..+
T Consensus 303 L~~~~~~~~~~~~-----------------v~~~g~~~~i~~~~~--~~~~~~~l~~~---gv~v-~~~----------- 348 (377)
T PRK02936 303 LQEELEHLECVKN-----------------IRGKGLMIGIECTEE--VAPVIEQLREE---GLLV-LSA----------- 348 (377)
T ss_pred HHHHHhhCCcEEe-----------------EeecceEEEEEecch--HHHHHHHHHHC---CeEE-ecC-----------
Confidence 8763 1 111100 013467999999753 45666666642 3221 110
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 395 STSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 395 ~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
..+.|||++. ...+++.++.+.+.|++
T Consensus 349 ----------------g~~~lRi~p~-~~~~~~~i~~~i~~l~~ 375 (377)
T PRK02936 349 ----------------GPNVIRLLPP-LVVTKEELDQAVYLLKK 375 (377)
T ss_pred ----------------CCCEEEEECC-cccCHHHHHHHHHHHHH
Confidence 1368999986 55566666666666543
No 241
>PRK07505 hypothetical protein; Provisional
Probab=99.87 E-value=1.9e-19 Score=180.65 Aligned_cols=312 Identities=13% Similarity=0.100 Sum_probs=187.8
Q ss_pred cCCH-HHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhc----CCCC-eEEE
Q 013210 70 VMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLC----SSGG-HVVA 143 (447)
Q Consensus 70 ~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~----~~gd-~Vi~ 143 (447)
.|++ +++.+.++. +++.......++...+...+++++|+++++. ..++++||++|+..++..+. .+|+ .||+
T Consensus 62 ~p~v~~A~~~~l~~-~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~ 139 (402)
T PRK07505 62 HPAIIEGAVDALKR-TGSLHLSSSRTRVRSQILKDLEEALSELFGA-SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMV 139 (402)
T ss_pred CHHHHHHHHHHHHH-hCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CEEEECChHHHHHHHHHHHHhcccCCCCCCEEE
Confidence 3444 566555542 3321111122234566789999999999998 77878889999998886532 2233 3666
Q ss_pred eCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeC
Q 013210 144 ARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDN 223 (447)
Q Consensus 144 ~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~ 223 (447)
.+..||+......... + .+.++.+++..|++++++++ +++++++++.+|+||+|.+.|+++|.++|+++|+++|+||
T Consensus 140 ~~~~~H~s~~~~~~~~-~-~~~~v~~~~~~d~~~l~~~~-~~~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DE 216 (402)
T PRK07505 140 FDKNAHASLNILKGIC-A-DETEVETIDHNDLDALEDIC-KTNKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDD 216 (402)
T ss_pred EchhhhHhHHhhhhhh-h-cCCeEEEeCCCCHHHHHHHH-hcCCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEEC
Confidence 6666655432221222 2 24578888888999999998 6677899999999999999999999999999999999999
Q ss_pred CCC--CCC-----CC--cc---CCCCeEEEeCCCccccCCCCeeEEEEE-cChHHHHHHHHHhhhhhhhcCCCccH--HH
Q 013210 224 TFS--PLV-----LS--PA---RLGADVVVHSISKFISGGADIIAGAVC-GPANLVNSMMDLHQGALMLLGPTMNP--KV 288 (447)
Q Consensus 224 ~~~--~~~-----~~--~~---~~g~di~~~S~sK~~g~~g~~igG~l~-~~~~~~~~l~~~~~~~~~~~g~~~~~--~~ 288 (447)
+|+ .+. +. .. ....++++.|++|.++++| |+++ .++++++.+....... ..+.++.+ .+
T Consensus 217 a~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G----g~~~~~~~~~~~~~~~~~~~~--t~~~~~~~~a~a 290 (402)
T PRK07505 217 AHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG----GVIMLGDAEQIELILRYAGPL--AFSQSLNVAALG 290 (402)
T ss_pred cccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC----eEEEeCCHHHHHHHHHhCCCc--eeCCCCCHHHHH
Confidence 982 111 11 11 1234688889999999764 7765 5778888887654422 22222222 22
Q ss_pred HH-HHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCc-EEEEEeCCHHHHHH
Q 013210 289 AF-ELSE--RIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGG-LLCLDMETEEKANR 364 (447)
Q Consensus 289 a~-~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~-~~~~~l~~~~~~~~ 364 (447)
+. ..+. ..+.+.++.+++.++...+...+... + . +.+. +..+.+++...+..
T Consensus 291 a~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~---~------------------g~~~~i~~~~~~~~~~~~~ 346 (402)
T PRK07505 291 AILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE---Q---S------------------GSFLPIRLIYIGDEDTAIK 346 (402)
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc---C---C------------------CCCCCEEEEEeCCHHHHHH
Confidence 22 2222 12223333333433333332222110 0 0 1222 34455554444677
Q ss_pred HHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013210 365 LMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 365 l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 441 (447)
+.+.|... | +.+.... .|.. +...+.|||+++ ...+++.++.+.++|+++..
T Consensus 347 ~~~~l~~~---G-i~v~~~~------~p~~--------------~~~~~~lRi~~~-~~~t~eei~~~~~~l~~~l~ 398 (402)
T PRK07505 347 AAKQLLDR---G-FYTSPVF------FPVV--------------AKGRAGLRIMFR-ASHTNDEIKRLCSLLKEILD 398 (402)
T ss_pred HHHHHHHC---C-CeEeeec------CCCC--------------CCCCceEEEecC-ccCCHHHHHHHHHHHHHHHH
Confidence 88887752 3 2332211 0110 012368999999 87888888888888876643
No 242
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.87 E-value=8.6e-20 Score=180.44 Aligned_cols=306 Identities=17% Similarity=0.177 Sum_probs=203.2
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHh-cCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC---
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 173 (447)
.+.++++|+++++++|.+.++.|+|||.|+.+++.++ +++||+|+++..+|.++...+. ..|.+++++|++
T Consensus 24 g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~-----~~G~~pv~~Di~~~~ 98 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAIL-----WAGAEPVFVDIDPET 98 (363)
T ss_dssp SHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHH-----HTT-EEEEE-BETTT
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHH-----HhccEEEEEeccCCc
Confidence 5788999999999999999999999999999999987 6789999999999999988873 379999999876
Q ss_pred ---CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCC-CCCCccCC--CCeEEEeCC--C
Q 013210 174 ---DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSP-LVLSPARL--GADVVVHSI--S 245 (447)
Q Consensus 174 ---d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~-~~~~~~~~--g~di~~~S~--s 245 (447)
|++++++++ +++|++|++.+ ..|...|+++|.++|+++|+++|.|++|+. ..++.... --|+.++|| +
T Consensus 99 ~~id~~~~~~~i-~~~t~ai~~~h---~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~~~ 174 (363)
T PF01041_consen 99 LNIDPEALEKAI-TPKTKAILVVH---LFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFHPT 174 (363)
T ss_dssp SSB-HHHHHHHH-HTTEEEEEEE----GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEESSTT
T ss_pred CCcCHHHHHHHh-ccCccEEEEec---CCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecCCCC
Confidence 899999999 88999998754 468888999999999999999999999933 22322211 248999998 5
Q ss_pred ccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhhh-------------hcCCCccHHHHHHHHccCCcHHHHHHHHHHHHH
Q 013210 246 KFISGGADIIAGAVCG-PANLVNSMMDLHQGALM-------------LLGPTMNPKVAFELSERIPHLGLRMKEHCHRAL 311 (447)
Q Consensus 246 K~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~-------------~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~ 311 (447)
|.+.. |. ||+++. ++++.++++.++..+.. .....++...|..++..++.+.+++++.+++.+
T Consensus 175 K~i~~-ge--GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~ 251 (363)
T PF01041_consen 175 KIITT-GE--GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQ 251 (363)
T ss_dssp SSS-S-SS---EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCcC-CC--CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 99863 43 588866 56778888776653211 112346667777777788889999999999999
Q ss_pred HHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhcccccccccccccCcccc
Q 013210 312 IFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQNYAQFGFMAVSLGYYETL 388 (447)
Q Consensus 312 ~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~l~~~l~~~~~~g~~~vs~G~~~s~ 388 (447)
.+.+.|...+. ...... +.... .....+.+.+++. .....+++.|...+ +.+.......+
T Consensus 252 ~y~~~L~~~~~~~~~~~~-~~~~~------------~~~~~f~i~~~~~~~~~rd~l~~~L~~~G----I~~~~~~~~pl 314 (363)
T PF01041_consen 252 RYREALAGIPGIKPPPIP-DGAER------------SSYYRFPIRLPDEALADRDELVEALRARG----IETRPHYPKPL 314 (363)
T ss_dssp HHHHHHTTGTTEEEEGCG-TTTEE------------BCESSEEEEETCCGCSTHHHHHHHHHHTT----BEEBCSTSSCG
T ss_pred HHHHHHhcCCCccccccc-ccccc------------cccccccccccccccchHHHHHHHHHHCC----CcccccccCch
Confidence 99999998865 222211 11000 0112556666642 12567788887632 34443331112
Q ss_pred ccccccccC-----CCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013210 389 MSCSGSSTS-----SELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 437 (447)
Q Consensus 389 ~~~~a~~~~-----~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 437 (447)
-..|..... ...+..+.. ....|.+-+. ..-+++.++.+.++|+
T Consensus 315 ~~~~~~~~~~~~~~~~~P~ae~l----~~r~l~LP~~-~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 315 HRQPVYRSYPYYAPGDLPNAERL----SQRLLSLPIH-PRLTEEDVDYIAEAIR 363 (363)
T ss_dssp GGSGGGTTGEEEETSSSHHHHHH----HHHEEEEEHS-TTSCHHHHHHHHHHHH
T ss_pred hhhHHHHhcCccccCCCHHHHHH----HhCeEECcCC-CCCCHHHHHHHhhccC
Confidence 111221111 112222211 2356888888 7777888888887764
No 243
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.86 E-value=1e-19 Score=182.45 Aligned_cols=289 Identities=15% Similarity=0.178 Sum_probs=192.5
Q ss_pred CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhc---------CC-CCeEEEeCCCchhH-HHHHHhhcC----c
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLC---------SS-GGHVVAARTLYGGT-HALLTHFFP----R 161 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~---------~~-gd~Vi~~~~~y~~~-~~~~~~~~~----~ 161 (447)
..+...+++++|+++++.+.++|++||++|+..+++.+. .+ .++|+.....||+. ...+..... .
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~ 156 (401)
T TIGR01885 77 YNDVFGEFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRT 156 (401)
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccccc
Confidence 456678999999999998899999999999999998742 12 35788888888764 343321000 0
Q ss_pred ccC---eeEEEeCCCCHHHHHHhhcc--CCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCC-
Q 013210 162 ACN---ITTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLS- 231 (447)
Q Consensus 162 ~~g---~~~~~v~~~d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~- 231 (447)
..+ ..+..++..|+++|++++++ +++.+|++|++++++|.+.| +++|.++|++||+++|+||+|+++...
T Consensus 157 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G 236 (401)
T TIGR01885 157 NFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTG 236 (401)
T ss_pred ccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc
Confidence 011 23455667789999988842 56789999999999999987 999999999999999999998554321
Q ss_pred ------ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHH
Q 013210 232 ------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKE 305 (447)
Q Consensus 232 ------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~ 305 (447)
......|+++ ++|.+++.+.++ |+++.++++++.+..... ..+..++++.+.++..++..++. ....++
T Consensus 237 ~~~~~~~~~~~~di~~--~gK~l~~g~~~i-g~v~~~~~i~~~~~~~~~-~~t~~~~p~~~~aa~a~L~~i~~-~~l~~~ 311 (401)
T TIGR01885 237 KLLCVDHENVKPDIVL--LGKALSGGVYPV-SAVLADDDVMLTIKPGEH-GSTYGGNPLACAVAVAALEVLEE-EKLAEN 311 (401)
T ss_pred hhhHHhhcCCCCCEEE--eeccccCCCCCc-EEEEEcHHHHhhccCCCC-CCCCCCCHHHHHHHHHHHHHHHh-ccHHHH
Confidence 1223467665 679999766888 888888888877754222 11233444444344333333321 123355
Q ss_pred HHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH---HHHHHHHHHhhcccccccccccc
Q 013210 306 HCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE---EKANRLMNYLQNYAQFGFMAVSL 382 (447)
Q Consensus 306 ~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~---~~~~~l~~~l~~~~~~g~~~vs~ 382 (447)
..++.+++.+.|++++..+.. ...|.|.++.+.++.. ..+..+...|... |+ .++.
T Consensus 312 ~~~~~~~~~~~L~~l~~~~~~-----------------~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~---Gv-~v~~ 370 (401)
T TIGR01885 312 AEKLGEIFRDQLKKLPKPIIT-----------------EVRGRGLLNAIVIDESKTGRTAWDLCLKLKEK---GL-LAKP 370 (401)
T ss_pred HHHHHHHHHHHHHhccCCcee-----------------EEeecCeeEEEEeccCcchhHHHHHHHHHHhC---CE-EEEe
Confidence 667788888888876432210 0014677888888643 2467788887652 32 2211
Q ss_pred cCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 383 GYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 383 G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+ .++.+||++. ...+++.|+.+.++|++.
T Consensus 371 ~---------------------------~~~~lRi~p~-l~~t~~~i~~~l~~l~~~ 399 (401)
T TIGR01885 371 T---------------------------HGNIIRLAPP-LVITEEQLDEGLEIIKKV 399 (401)
T ss_pred c---------------------------CCCEEEEeCC-ccCCHHHHHHHHHHHHHH
Confidence 1 1467999998 777777777777777653
No 244
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.86 E-value=4.1e-19 Score=176.94 Aligned_cols=350 Identities=16% Similarity=0.189 Sum_probs=214.2
Q ss_pred CCCCchhhHhhh-cCCCCCCCCccccccccccccccCCH-HHHHHhhcCCCCC--CCCCccccCCCCchHH-HHHHHHHH
Q 013210 36 AAWEDPAAALAS-ARHEFGEHGGVNMSIEASATFTVMEP-ETMRRMFAGELGP--DRDFFIYSRHFNPTVL-NLSRQMAA 110 (447)
Q Consensus 36 ~~~~~~~~~~~~-~~~~~~~~~~~~~pi~~att~~~~~~-~~~~~~~~~~~~~--~~~~~~~~r~~~~~~~-~l~~~ia~ 110 (447)
++..||+..-+- .... .+.. .-.+.+|.+++.+.+ +.+-..+.++|.. |...|+-|-..-..++ .+.++..+
T Consensus 30 l~~~d~~~~~~~~~e~~-rq~~--~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~ 106 (493)
T PRK13580 30 ILHVEPRIAEAIRQELA-DQRS--SLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKE 106 (493)
T ss_pred HHhhCHHHHHHHHHHHH-HHhc--CceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHH
Confidence 455677554333 3222 1222 335677888888776 6666666665532 2222322222222233 34556667
Q ss_pred HhCCCeEE-EeCChHHHHHHHHHHhcCC-------------------------------CCeEEEeCCCchhHHHHHHhh
Q 013210 111 LEGTEAAY-CTASGMSAISSVLMQLCSS-------------------------------GGHVVAARTLYGGTHALLTHF 158 (447)
Q Consensus 111 l~g~~~~~-~tsggt~A~~~al~~l~~~-------------------------------gd~Vi~~~~~y~~~~~~~~~~ 158 (447)
++|++.+- =--||+.||..++.++++| ||+|+..+..+++....- +
T Consensus 107 lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg--~ 184 (493)
T PRK13580 107 LFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG--F 184 (493)
T ss_pred HhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC--c
Confidence 88988753 3469999999999999876 799998887775543211 0
Q ss_pred cCcccC--eeEEEeCCC------CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC-CCC-
Q 013210 159 FPRACN--ITTTFVDIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPL- 228 (447)
Q Consensus 159 ~~~~~g--~~~~~v~~~------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~- 228 (447)
.....+ ..+..++.+ |.+++++.+ ++++++|++.+.+|- +.+.|+++|.++|+++|+++++|++| .++
T Consensus 185 ~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~-~~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gli 262 (493)
T PRK13580 185 RPNISGKMFHQRSYGVDPDTGLLDYDEIAALA-REFKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLV 262 (493)
T ss_pred ccchhhheeeeEecccCcccCccCHHHHHHHH-hhcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhcee
Confidence 000011 233333222 889999999 778888888888887 55889999999999999999999999 333
Q ss_pred CC-------CccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHH--HHccC--C
Q 013210 229 VL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFE--LSERI--P 297 (447)
Q Consensus 229 ~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~--~~~~~--~ 297 (447)
.. ++. .++|++++|+||++.||. ||++++++++++.+..... + ..|+...+..+.. ++..+ .
T Consensus 263 gg~~~~~~~~~~-~~~D~vtgT~hKaL~GP~---GG~I~~~~~l~~~L~~a~P-~--i~gg~l~p~iAA~avAl~e~~~~ 335 (493)
T PRK13580 263 AGKVFTGDEDPV-PHADIVTTTTHKTLRGPR---GGLVLAKKEYADAVDKGCP-L--VLGGPLPHVMAAKAVALAEARTP 335 (493)
T ss_pred ccccchhhcCCC-CCCcEEEeCChhhccCCC---eEEEEecHHHHHHHhhCCC-c--ccCCCccHHHHHHHHHHHHHhCc
Confidence 21 222 278999999999995442 5999999998888854332 1 3344444333322 22222 2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHH-HHHHHHHhhcccccc
Q 013210 298 HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEK-ANRLMNYLQNYAQFG 376 (447)
Q Consensus 298 ~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~-~~~l~~~l~~~~~~g 376 (447)
...++.+++.++.++|++.|++.|+.+...+ .+ ..++.+.+.+... ...+.+.|... |
T Consensus 336 ef~~y~~~l~~Na~~La~~L~~~G~~vv~gg-Td-----------------shIV~V~lg~~~~~g~~a~~~L~e~---G 394 (493)
T PRK13580 336 EFQKYAQQVVDNARALAEGFLKRGARLVTGG-TD-----------------NHLVLIDVTSFGLTGRQAESALLDA---G 394 (493)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCCccCCC-CC-----------------CCEEEEEeCCHHHHHHHHHHHHHHC---C
Confidence 2355778899999999999999988654322 11 2399999975542 33455566652 2
Q ss_pred cccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC----CCHHHHHHHHHHHHHHh
Q 013210 377 FMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL----GTLDQRWSQFEKALSRM 439 (447)
Q Consensus 377 ~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~----~~~~~~i~~l~~al~~~ 439 (447)
|.++ .+..|..... ......|||++. . ...+++++.+.++|.++
T Consensus 395 -I~vn------~i~~Ptvp~g-----------~~~~srLRIg~~-A~ttrg~teedi~~iad~l~~~ 442 (493)
T PRK13580 395 -IVTN------RNSIPSDPNG-----------AWYTSGIRLGTP-ALTTLGMGSDEMDEVAELIVKV 442 (493)
T ss_pred -eEEc------cccCCCCCCC-----------CCCCceEEeccc-hhhhcCCCHHHHHHHHHHHHHH
Confidence 2222 1223433210 012467999987 5 22355566666655544
No 245
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.86 E-value=4.7e-20 Score=177.89 Aligned_cols=246 Identities=15% Similarity=0.188 Sum_probs=169.3
Q ss_pred ccccCCCCchHHHHHHHHHHHhCC-CeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhc--------
Q 013210 91 FIYSRHFNPTVLNLSRQMAALEGT-EAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFF-------- 159 (447)
Q Consensus 91 ~~~~r~~~~~~~~l~~~ia~l~g~-~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~-------- 159 (447)
..||.-.... -++.+.|.++.+. |.+-|++|||||+..+++... ...|+|+..+.+||+..+.+..-.
T Consensus 86 ~~fg~Pte~E-i~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g 164 (432)
T COG0001 86 LSFGAPTELE-VELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLG 164 (432)
T ss_pred CCCCCCCHHH-HHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCC
Confidence 3455433323 3455666666665 889999999999999998542 335899999999999888773210
Q ss_pred -CcccCe------eEEEeCCCCHHHHHHhhcc--CCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCC
Q 013210 160 -PRACNI------TTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFS 226 (447)
Q Consensus 160 -~~~~g~------~~~~v~~~d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~ 226 (447)
+...|+ .+..++.+|++.++++++. ++..+|++|.+....|.|.| +++|.++|+++|+++|.||+.+
T Consensus 165 ~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViT 244 (432)
T COG0001 165 SPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVIT 244 (432)
T ss_pred CCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchh
Confidence 111222 2445667799999999854 47899999999888899876 8899999999999999999997
Q ss_pred CCCCCcc----CCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhh--hhhhhcCCCccHHHHHHHHccCCcHH
Q 013210 227 PLVLSPA----RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ--GALMLLGPTMNPKVAFELSERIPHLG 300 (447)
Q Consensus 227 ~~~~~~~----~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~--~~~~~~g~~~~~~~a~~~~~~~~~l~ 300 (447)
++..... .+|+...+.++.|.+| .|.++ |++.+++++++.+..... +..+..|+.++..+..+.+..+....
T Consensus 245 GFR~~~gGaq~~~gi~PDlttlGKiIG-GGlP~-ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~ 322 (432)
T COG0001 245 GFRVALGGAQGYYGVEPDLTTLGKIIG-GGLPI-GAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEE 322 (432)
T ss_pred hcccCCcccccccCcCcchhhhhhhhc-CCcce-eeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcc
Confidence 7765422 2255555556999999 57888 999999999997754321 23345666666666555554443322
Q ss_pred HHHHHHHHHHHHHHHHHHh----CCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013210 301 LRMKEHCHRALIFARRMKK----LGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 358 (447)
Q Consensus 301 ~~~~~~~~~~~~l~~~L~~----~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 358 (447)
...+++.++.++|.+.|++ ++..+... +.|+++.|.|..
T Consensus 323 ~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~-------------------~~gsm~~i~F~~ 365 (432)
T COG0001 323 GVYERLDALGERLAEGLRAAAERHGIPLTVN-------------------RVGSMFGIFFTE 365 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-------------------eecceEEEEecC
Confidence 2455666666666666654 44432211 367788888863
No 246
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.86 E-value=1.2e-20 Score=181.16 Aligned_cols=159 Identities=17% Similarity=0.216 Sum_probs=128.7
Q ss_pred CCchHHHHHHHHHHHhCCCeEEE-eCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC---
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYC-TASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI--- 172 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~-tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~--- 172 (447)
....+.++++.+|+++|++.++| |+|+++++.+++.+++++||+|+++.++|.++...+. ..|.++.+++.
T Consensus 57 ~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~-----~~g~~~~~v~~~~~ 131 (294)
T cd00615 57 PTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLV-----LSGAVPVYLKPERN 131 (294)
T ss_pred CChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHH-----HCCCEEEEecCccC
Confidence 34567899999999999988765 9999999999999999999999999999999887763 25777776643
Q ss_pred --------CCHHHHHHhhcc-CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCC-CCCC------CccCCC
Q 013210 173 --------SDHEMVNSAIVQ-GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PLVL------SPARLG 236 (447)
Q Consensus 173 --------~d~~~l~~~i~~-~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~~~------~~~~~g 236 (447)
.|++++++++++ +++++|++++| |++|.+.|+++|+++|+++|+++|+|++|+ .+.+ +....+
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~ 210 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAG 210 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcC
Confidence 278999998843 57899999988 789999999999999999999999999994 3322 223458
Q ss_pred CeEEEeCCCccccCCCCeeEEEEEcCh
Q 013210 237 ADVVVHSISKFISGGADIIAGAVCGPA 263 (447)
Q Consensus 237 ~di~~~S~sK~~g~~g~~igG~l~~~~ 263 (447)
+|+++.|+||++++. +.||++..+.
T Consensus 211 ~div~~S~hK~l~g~--~~~~~l~~~~ 235 (294)
T cd00615 211 ADIVVQSTHKTLPAL--TQGSMIHVKG 235 (294)
T ss_pred CcEEEEchhcccchH--hHHHHHHhCC
Confidence 999999999998643 3445654443
No 247
>PLN02624 ornithine-delta-aminotransferase
Probab=99.85 E-value=2.9e-19 Score=181.93 Aligned_cols=290 Identities=15% Similarity=0.207 Sum_probs=185.0
Q ss_pred CCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC---------CCC-eEEEeCCCchhHHHHHHhh-------
Q 013210 96 HFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCS---------SGG-HVVAARTLYGGTHALLTHF------- 158 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~---------~gd-~Vi~~~~~y~~~~~~~~~~------- 158 (447)
..++...++.++|+++.+.+.++|++||++|+..|++.... +++ .|+.....||+........
T Consensus 114 ~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~ 193 (474)
T PLN02624 114 FYNDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEAT 193 (474)
T ss_pred cCCHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCcccc
Confidence 45677788999999999888999999999999999974432 123 5777877787763322111
Q ss_pred ---cCcccCeeEEEeCCCCHHHHHHhhcc--CCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCC
Q 013210 159 ---FPRACNITTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLV 229 (447)
Q Consensus 159 ---~~~~~g~~~~~v~~~d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~ 229 (447)
.+. ...+.+++..|++.+++.++. +++++|++|+++|++|.+.| +++|.++|++||+++|+||+|+++.
T Consensus 194 ~~~~~~--~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~G 271 (474)
T PLN02624 194 RGFGPL--LPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLA 271 (474)
T ss_pred ccCCCC--CCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcC
Confidence 111 112455677789999998832 56889999999999999987 9999999999999999999996553
Q ss_pred CCc-------cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHH
Q 013210 230 LSP-------ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLR 302 (447)
Q Consensus 230 ~~~-------~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~ 302 (447)
... .....|+++ ++|.+|+++.++ |+++.++++++.+..... ..+..++.+.+.++.+.+..++. ...
T Consensus 272 rtG~~~a~~~~~i~pDiv~--lsK~lggG~~pi-gav~~~~~i~~~~~~~~~-~~T~~g~pl~~aaa~aaLe~l~~-~~l 346 (474)
T PLN02624 272 RTGKMLACDWEEVRPDVVI--LGKALGGGVIPV-SAVLADKDVMLCIKPGEH-GSTFGGNPLASAVAMAALQVVQD-EKL 346 (474)
T ss_pred cCcchhhHHhcCCCCCEEE--ecccccCCCCcc-eeeeecHHHHhHhccCCc-CCCCCCCHHHHHHHHHHHHHHHh-chH
Confidence 211 122456666 689999877888 888888888776653322 12223444444444444333221 123
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeeCCC-CCCCchhHHHHHHhccCCCcCcEEEEEeCC----HHHHHHHHHHhhccccccc
Q 013210 303 MKEHCHRALIFARRMKKLGLKVLYPG-LEDHPHHELLKSMANKEYGFGGLLCLDMET----EEKANRLMNYLQNYAQFGF 377 (447)
Q Consensus 303 ~~~~~~~~~~l~~~L~~~~~~v~~p~-~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~----~~~~~~l~~~l~~~~~~g~ 377 (447)
.++..++.+++.+.|+++..+. |. +. ...|.|.++.+.+.. ...+..+.+.|.. .|+
T Consensus 347 ~~~~~~~~~~l~~~L~~l~~~~--~~~i~-------------~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e---~GV 408 (474)
T PLN02624 347 AERSAKLGQELRDQLQKIQKQF--PKLIK-------------EVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKE---RGL 408 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC--CCceE-------------EEEeeEEEEEEEecCCCcChHHHHHHHHHHHh---CCe
Confidence 3344555666666665532110 10 00 011467788888863 2345677777765 232
Q ss_pred ccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 378 MAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 378 ~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
.+..+ ..+.|||++. ...+++.++.+.+.|+++
T Consensus 409 -~v~p~---------------------------~~~~lR~~p~-l~~t~e~id~~l~~L~~~ 441 (474)
T PLN02624 409 -LAKPT---------------------------HDTIIRLAPP-LSISEDELQECSKALSDV 441 (474)
T ss_pred -EEecC---------------------------CCCEEEEECC-ccCCHHHHHHHHHHHHHH
Confidence 22111 1467999987 656666666655555443
No 248
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.85 E-value=9.6e-20 Score=179.50 Aligned_cols=314 Identities=11% Similarity=0.059 Sum_probs=194.3
Q ss_pred cccccccCCH-HHHHHhhcCCCCCCC-CCccccCCCC---chHHHHHHHHHHHhCC---CeEEEeCC-hHHHHHHHHHHh
Q 013210 64 ASATFTVMEP-ETMRRMFAGELGPDR-DFFIYSRHFN---PTVLNLSRQMAALEGT---EAAYCTAS-GMSAISSVLMQL 134 (447)
Q Consensus 64 ~att~~~~~~-~~~~~~~~~~~~~~~-~~~~~~r~~~---~~~~~l~~~ia~l~g~---~~~~~tsg-gt~A~~~al~~l 134 (447)
.+++...+++ +++...+.. ++|+. +.|..+.... ..++++|+.+++++|+ +.++||+| ||+|+++++.++
T Consensus 5 pGp~~~p~~V~~a~~~~~~~-~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l 83 (355)
T cd00611 5 AGPAALPEEVLEQAQKELLD-FNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNL 83 (355)
T ss_pred CCCCCCCHHHHHHHHHHHhh-cccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc
Confidence 3445555566 667666643 23433 3455553223 6688999999999996 23888877 999999999999
Q ss_pred cC---CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC------C-HHHHHHhhccCCceEEEEEcCCCCCccccC
Q 013210 135 CS---SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS------D-HEMVNSAIVQGRTKVLYFESISNPTLAVAN 204 (447)
Q Consensus 135 ~~---~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~------d-~~~l~~~i~~~~t~lV~i~~~~NptG~v~~ 204 (447)
+. +|++|++....+. .. ....+ .|+++++++.+ + ++..+..+ ++++++|.+.+..|.||.+.+
T Consensus 84 ~~~~~~~~~i~~g~~~~~-~~----~~a~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~lV~~~h~~t~tG~~~~ 156 (355)
T cd00611 84 LGDKGTADYVVTGAWSAK-AA----KEAKR-YGGVVVIVAAKEEGKYTKIPDVETWDL-APDAAYVHYCSNETIHGVEFD 156 (355)
T ss_pred CCCCCeEEEEECCHHHHH-HH----HHHHh-cCCCcEEEecccccCCCCCCCHhhcCC-CCCCCEEEEeCCcccccEEcc
Confidence 77 4556655322211 11 22234 67777777643 3 23333445 678999999999999999843
Q ss_pred HHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhh--------
Q 013210 205 IPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ-------- 274 (447)
Q Consensus 205 l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~-------- 274 (447)
++++.||+++++|.++ +..+++..+++ +++.|.+|++|++| + |+++.+++.++++.....
T Consensus 157 -----~i~~~~g~~~~VDa~qs~g~~~idv~~~~--~~~ss~~K~lGP~G--~-g~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (355)
T cd00611 157 -----EVPDTGGVPLVADMSSNILSRPIDVSKFG--VIYAGAQKNLGPAG--V-TVVIVRKDLLGKARKITPSMLNYKTH 226 (355)
T ss_pred -----eecccCCCeEEEEccccccCCCCCHHHhC--EEEeecccccCCCc--e-EEEEECHHHHhhcccCCCCcccHHHH
Confidence 4455699999999999 66677776665 45566999999888 4 888888888766543110
Q ss_pred -hhhhhcCCCccHHHHHH---HHccC--C-cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCC
Q 013210 275 -GALMLLGPTMNPKVAFE---LSERI--P-HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYG 347 (447)
Q Consensus 275 -~~~~~~g~~~~~~~a~~---~~~~~--~-~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g 347 (447)
......+ +++....+. ++..+ . .+..+.++.+++++++.+.|++++. +..+.. .+.. .
T Consensus 227 ~~~~~~~~-Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~g-l~~~~~--~~~~-----------r 291 (355)
T cd00611 227 ADNNSLYN-TPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNG-FYRGPV--DKRA-----------R 291 (355)
T ss_pred HhcCCCCC-CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCcc-ccccCC--CHHH-----------c
Confidence 0000122 222211111 22211 2 3556677789999999999998832 210110 0110 1
Q ss_pred cCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHH
Q 013210 348 FGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQ 427 (447)
Q Consensus 348 ~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~ 427 (447)
.+.+++|.+++......+.+.+.. .|++ ...| . + ..+.+|+|++ ..++++
T Consensus 292 s~~vvsf~~~~~~l~~~~~~~~~r---~G~~-~~~~----------~--------------~-~~g~vR~S~~-~~nt~e 341 (355)
T cd00611 292 SRMNVPFRLGKEELEKEFLKEAEA---AGMI-GLKG----------H--------------R-SVGGIRASIY-NALSLE 341 (355)
T ss_pred CceEEEEEcCChhhhHHHHHHHHH---CCCc-ccCC----------C--------------c-ccCeEEEEcc-CCCCHH
Confidence 234799998764111333333322 2321 2222 0 0 1368999999 999999
Q ss_pred HHHHHHHHHHHhh
Q 013210 428 RWSQFEKALSRMQ 440 (447)
Q Consensus 428 ~i~~l~~al~~~~ 440 (447)
+|+.|.++|++++
T Consensus 342 di~~l~~al~~~~ 354 (355)
T cd00611 342 GVQALADFMKEFQ 354 (355)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
No 249
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.85 E-value=4e-19 Score=181.42 Aligned_cols=288 Identities=16% Similarity=0.144 Sum_probs=183.9
Q ss_pred chHHHHHHHHHHHhCCCeEEEe-CChHHHHHHH---HH-HhcCCCC----eEEEeCCCchhHHHHHHhhcCcccCeeEEE
Q 013210 99 PTVLNLSRQMAALEGTEAAYCT-ASGMSAISSV---LM-QLCSSGG----HVVAARTLYGGTHALLTHFFPRACNITTTF 169 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~~~~~t-sggt~A~~~a---l~-~l~~~gd----~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~ 169 (447)
..+.++++.+++++|.+++.++ ++|+.+...+ ++ .+..+|| +|+++.+.|+.+...+. ..|++++.
T Consensus 113 el~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~-----~~G~~vv~ 187 (481)
T PRK04366 113 ELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAA-----MAGFKVVE 187 (481)
T ss_pred HHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHH-----HcCCEEEE
Confidence 4567888999999998775444 4555444432 22 2345665 99999999999987762 26888888
Q ss_pred eCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccc-cCHHHHHHHHHhcCCEEEEeCCCC-C-C-CCCccCCCCeEE
Q 013210 170 VDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAV-ANIPELSRLAHDKGVTVVVDNTFS-P-L-VLSPARLGADVV 240 (447)
Q Consensus 170 v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v-~~l~~I~~la~~~gi~livD~~~~-~-~-~~~~~~~g~di~ 240 (447)
++.+ |+++|++++ +++|++|++++|| ++|.+ .|+++|+++|+++|+++|+|+++. . + ..++.++|+|++
T Consensus 188 v~~~~~~~~D~e~L~~~i-~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~ 265 (481)
T PRK04366 188 IPSNEDGLVDLEALKAAV-GEDTAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVV 265 (481)
T ss_pred eecCCCCCcCHHHHHhhc-ccCCeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEE
Confidence 7663 889999999 7789999999987 99987 589999999999999999999982 2 2 246778899999
Q ss_pred EeCCCccccCC---CCeeEEEEEcChHHHHHHHHHh---h--hhh----------h---hcCCCccHHHHHHHHc--cCC
Q 013210 241 VHSISKFISGG---ADIIAGAVCGPANLVNSMMDLH---Q--GAL----------M---LLGPTMNPKVAFELSE--RIP 297 (447)
Q Consensus 241 ~~S~sK~~g~~---g~~igG~l~~~~~~~~~l~~~~---~--~~~----------~---~~g~~~~~~~a~~~~~--~~~ 297 (447)
++|.||++++| |..-+|+++.++++.+.+.... . .+. + ..+.......++..+. +.+
T Consensus 266 ~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~ 345 (481)
T PRK04366 266 HLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAE 345 (481)
T ss_pred EEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHH
Confidence 99999998744 2222388888777666542100 0 000 0 0001111122222222 223
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEe-----CCHHHHHHHHHHhhcc
Q 013210 298 HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDM-----ETEEKANRLMNYLQNY 372 (447)
Q Consensus 298 ~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l-----~~~~~~~~l~~~l~~~ 372 (447)
.+.+..++...+++++.+.|+++ ..+.++. |. -..+.|.. .+. ....+.++|...
T Consensus 346 Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~~----~~--------------~~~~~~~~~~~~~~g~-~~~~v~~~L~~~ 405 (481)
T PRK04366 346 GLREVSEDAVLNANYLKARLKDI-YDLPYDR----PC--------------MHEFVLSGKKLKETGV-RTLDIAKRLLDY 405 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhh-CcccCCC----Ce--------------eEEEEEECccccccCC-CHHHHHHHHHHC
Confidence 34445566778889999999876 3333221 10 00222322 121 356777777752
Q ss_pred cccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 373 AQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 373 ~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
|+. .+. ...| ....+.+|+|++ ..+++++|+.|.++|.++.
T Consensus 406 ---Gi~---~~~----~~~p----------------~~~~~~l~is~~-e~~t~edid~l~~~l~~i~ 446 (481)
T PRK04366 406 ---GFH---PPT----IYFP----------------LIVPEALMIEPT-ETESKETLDAFIAAMKQIA 446 (481)
T ss_pred ---Ccc---CCc----cccc----------------cccCCeEEEccc-CCCCHHHHHHHHHHHHHHH
Confidence 321 110 0001 112468999999 8888888888888877664
No 250
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.84 E-value=2.7e-18 Score=172.83 Aligned_cols=211 Identities=16% Similarity=0.162 Sum_probs=160.0
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHh---------cCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEE
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQL---------CSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 168 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l---------~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~ 168 (447)
.+...++|+++|+++|.+.+++++||++|+.+++.++ +++||+||++.++|.++...+. ..|.+++
T Consensus 62 G~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~-----~~G~~pv 136 (438)
T PRK15407 62 GRFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPII-----QNGLVPV 136 (438)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHH-----HcCCEEE
Confidence 3557899999999999999999999999999999876 3789999999999998887763 2578888
Q ss_pred EeCCC------CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCC-CCCCCcc---CCCCe
Q 013210 169 FVDIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PLVLSPA---RLGAD 238 (447)
Q Consensus 169 ~v~~~------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~~~~~~---~~g~d 238 (447)
+++.+ |++++++++ +++|++|++++ +.|...++++|.++|+++|+++|+|++|+ +..++.. .+| |
T Consensus 137 ~vdvd~~~~~id~~~le~~i-~~~tkaVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g-d 211 (438)
T PRK15407 137 FVDVELPTYNIDASLLEAAV-SPKTKAIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG-D 211 (438)
T ss_pred EEecCCCcCCcCHHHHHHHc-CcCCeEEEEeC---CCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC-c
Confidence 77653 789999999 78999999876 46778899999999999999999999993 2223322 234 8
Q ss_pred EEEeCCC--ccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhhh---------------------------------hcC-
Q 013210 239 VVVHSIS--KFISGGADIIAGAVCG-PANLVNSMMDLHQGALM---------------------------------LLG- 281 (447)
Q Consensus 239 i~~~S~s--K~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~---------------------------------~~g- 281 (447)
+.++||+ |.+.. |. ||+++. ++++.+.++..+..+.. ..|
T Consensus 212 ~~~fSf~~~k~~~~-ge--GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 288 (438)
T PRK15407 212 IATLSFYPAHHITM-GE--GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGY 288 (438)
T ss_pred eEEEeCCCCCCccc-cC--ceEEEECCHHHHHHHHHHHHhCccccccccccccccccccccccccccccccccccccccc
Confidence 8888886 55542 32 588766 55666665544331100 012
Q ss_pred -CCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCC
Q 013210 282 -PTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLG 321 (447)
Q Consensus 282 -~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~ 321 (447)
..++...|+..+..++.+.+++++.+++++++.+.|...+
T Consensus 289 n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~ 329 (438)
T PRK15407 289 NLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLE 329 (438)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 2345566777777888888888889999999999997764
No 251
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.84 E-value=2.1e-18 Score=163.58 Aligned_cols=301 Identities=16% Similarity=0.184 Sum_probs=201.0
Q ss_pred ccccCCCCchHHHHHHHHHHHhC----C-----CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCc
Q 013210 91 FIYSRHFNPTVLNLSRQMAALEG----T-----EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPR 161 (447)
Q Consensus 91 ~~~~r~~~~~~~~l~~~ia~l~g----~-----~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~ 161 (447)
..||..... -++...+.+..+ . -+++.|+|.|.++..+++.+++.||+|++...+|.+....+ +
T Consensus 94 lQYg~s~G~--peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~-----~ 166 (472)
T KOG0634|consen 94 LQYGQSSGI--PELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSM-----E 166 (472)
T ss_pred hccccccCc--HHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhc-----c
Confidence 556654332 355556665544 1 25999999999999999999999999999999999988777 3
Q ss_pred ccCeeEEEeCCC----CHHHHHHhhcc--------CCceEEE-EEcCCCCCccccCH---HHHHHHHHhcCCEEEEeCCC
Q 013210 162 ACNITTTFVDIS----DHEMVNSAIVQ--------GRTKVLY-FESISNPTLAVANI---PELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 162 ~~g~~~~~v~~~----d~~~l~~~i~~--------~~t~lV~-i~~~~NptG~v~~l---~~I~~la~~~gi~livD~~~ 225 (447)
..|+++..|+.+ ++|.|++.+.+ ++.++++ |.+-+||||...++ ++|.++|++|++++|+|+.|
T Consensus 167 a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpY 246 (472)
T KOG0634|consen 167 ALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPY 246 (472)
T ss_pred ccCceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCcc
Confidence 368787777766 78888887632 3355555 46789999999875 49999999999999999998
Q ss_pred CCCCCC-------------------------ccC---CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhh
Q 013210 226 SPLVLS-------------------------PAR---LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL 277 (447)
Q Consensus 226 ~~~~~~-------------------------~~~---~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~ 277 (447)
.-+.+. +.. .|.++-..||||.++ ||.|+ ||+.+++-+++++..... ..
T Consensus 247 y~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRl-G~it~~~~~l~ril~~ae-~~ 323 (472)
T KOG0634|consen 247 YFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRL-GWITGNSLFLKRILDLAE-VA 323 (472)
T ss_pred ceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-Cccee-EEeecCHHHHHHHhhhcc-ee
Confidence 333211 111 267899999999999 89999 999999988888766544 22
Q ss_pred hhcCCCccHHHHHHHHcc------CCcHHHHHHHHHHHHHHHHHHHHhC-CC---eeeCCCCCCCchhHHHHHHhccCCC
Q 013210 278 MLLGPTMNPKVAFELSER------IPHLGLRMKEHCHRALIFARRMKKL-GL---KVLYPGLEDHPHHELLKSMANKEYG 347 (447)
Q Consensus 278 ~~~g~~~~~~~a~~~~~~------~~~l~~~~~~~~~~~~~l~~~L~~~-~~---~v~~p~~~~~p~~~l~~~~~~~~~g 347 (447)
+...+..++....+.+.. ++++......+..++..+...|.+. +. ++..|.
T Consensus 324 t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~------------------- 384 (472)
T KOG0634|consen 324 TSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPK------------------- 384 (472)
T ss_pred ecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCC-------------------
Confidence 233444555544443332 2445566667888999999999774 33 344332
Q ss_pred cCcEEEEEeC--------CHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe
Q 013210 348 FGGLLCLDME--------TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSV 419 (447)
Q Consensus 348 ~g~~~~~~l~--------~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~ 419 (447)
.|.++|++++ +..+++.++..... .+|+ -+-.|...... |..+ -+.-++|+|+
T Consensus 385 aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~v--k~gV-~~v~G~~F~v~--p~~s--------------~~kiffRls~ 445 (472)
T KOG0634|consen 385 AGMFIWVEIPYINFDTKKSINQIEEIIFIKAV--KNGV-KLVCGSWFMVD--PESS--------------WSKIFFRLSI 445 (472)
T ss_pred cceEEEEEecccccccccchHHHHHHHHHHHH--HCCe-EEecCceeEEc--CccC--------------CCcceEEEEe
Confidence 6779999995 33334554443332 2342 33334322111 1111 0124899999
Q ss_pred CCCCCHHHHHHHHHHHHHHhh
Q 013210 420 GYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 420 g~~~~~~~~i~~l~~al~~~~ 440 (447)
. ..+.+++.+.+++.-..++
T Consensus 446 a-~a~~e~l~~g~~rf~~~ik 465 (472)
T KOG0634|consen 446 A-FAEPEKLDEGIERFGSVIK 465 (472)
T ss_pred e-cCCHHHHHHHHHHHHHHHH
Confidence 9 8777766555544433333
No 252
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.84 E-value=3.8e-19 Score=190.92 Aligned_cols=294 Identities=17% Similarity=0.185 Sum_probs=201.1
Q ss_pred chHHHHHHHHHHHhCCCeEEEeCChH----HHHHHHHHHhcCC-CC----eEEEeCCCchhHHHHHHhhcCcccCeeEEE
Q 013210 99 PTVLNLSRQMAALEGTEAAYCTASGM----SAISSVLMQLCSS-GG----HVVAARTLYGGTHALLTHFFPRACNITTTF 169 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~~~~~tsggt----~A~~~al~~l~~~-gd----~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~ 169 (447)
..+.++++.+++++|.+.+.|+++++ +|++++++++.++ || +|+++..+|+++...+. ..|+++++
T Consensus 568 ~~~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~-----~~G~~vv~ 642 (993)
T PLN02414 568 EMFEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAA-----MCGMKIVV 642 (993)
T ss_pred HHHHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHH-----HCCCEEEE
Confidence 34579999999999999999999998 9999999999866 77 89999999999988873 25889999
Q ss_pred eCCC-----CHHHHHHhhcc--CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CC-CCCCccCCCCeE
Q 013210 170 VDIS-----DHEMVNSAIVQ--GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SP-LVLSPARLGADV 239 (447)
Q Consensus 170 v~~~-----d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~-~~~~~~~~g~di 239 (447)
++.+ |+++|++++.. ++|++|++.+|+|-+|.+.|+++|+++||++|+++++|.++ +. ...+|.++|+|+
T Consensus 643 v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~ 722 (993)
T PLN02414 643 VGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADV 722 (993)
T ss_pred eccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCE
Confidence 8864 89999999932 47899999999999999999999999999999999999999 33 345677899999
Q ss_pred EEeCCCccccCC---C-CeeEEEEEcChHHHHHHHHHh--h-h------hhhhcCCC--------ccHHHHHHH--HccC
Q 013210 240 VVHSISKFISGG---A-DIIAGAVCGPANLVNSMMDLH--Q-G------ALMLLGPT--------MNPKVAFEL--SERI 296 (447)
Q Consensus 240 ~~~S~sK~~g~~---g-~~igG~l~~~~~~~~~l~~~~--~-~------~~~~~g~~--------~~~~~a~~~--~~~~ 296 (447)
+++|.||++++| | .-+ |+++.++++...+-... . . .....|+. .....++.. ..+.
T Consensus 723 ~~~s~HK~f~~P~G~GGPg~-G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~ 801 (993)
T PLN02414 723 CHLNLHKTFCIPHGGGGPGM-GPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGS 801 (993)
T ss_pred EEecCCccCCcCcccCCCCe-eeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCH
Confidence 999999966522 1 114 88888877665442110 0 0 00011221 111122222 2233
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE-eCC--HHHHHHHHHHhhccc
Q 013210 297 PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD-MET--EEKANRLMNYLQNYA 373 (447)
Q Consensus 297 ~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~-l~~--~~~~~~l~~~l~~~~ 373 (447)
+.+.+..++...+++++++.|.+ +..+.+++-...--| -.++.+. ++. ...+..+.++|..
T Consensus 802 ~Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~~~~h-------------Efv~~~~~l~~~~g~~~~di~krL~d-- 865 (993)
T PLN02414 802 EGLTDASKIAILNANYMAKRLEG-HYPVLFRGKNGTCAH-------------EFIIDLRPFKNTAGIEPEDVAKRLMD-- 865 (993)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCCCeee-------------eEEEeccccccccCCCHHHHHHHHHH--
Confidence 44555556677889999999976 333433321000000 0122222 221 1224667777775
Q ss_pred ccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013210 374 QFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 374 ~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 441 (447)
+|+.+.... .| ..+.+||++. ..++++++|.|.+++..+..
T Consensus 866 -~Gihapt~~-------~p------------------v~~~lmiepT-E~~skeelDrf~~al~~i~~ 906 (993)
T PLN02414 866 -YGFHAPTMS-------WP------------------VPGTLMIEPT-ESESKAELDRFCDALISIRE 906 (993)
T ss_pred -cCcEEeeec-------cc------------------cCCEEEEEee-eeCCHHHHHHHHHHHHHHHH
Confidence 443221100 01 1478999999 88888999999998877653
No 253
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.84 E-value=1.1e-18 Score=173.27 Aligned_cols=284 Identities=13% Similarity=0.053 Sum_probs=186.5
Q ss_pred CCchHHHHHHHHHHHhCCC---eEEEeC-ChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCe-eEEEeC
Q 013210 97 FNPTVLNLSRQMAALEGTE---AAYCTA-SGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNI-TTTFVD 171 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~---~~~~ts-ggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~-~~~~v~ 171 (447)
....+++.++.+++++|+. +++|++ |||+++++++.+++++++.+++...+|+..... ....+ .|+ +++.++
T Consensus 46 f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~~g~f~~~~~~--~~~~~-~g~~~v~~~~ 122 (378)
T PRK03080 46 VKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLAWESFGSKWAT--DVVKQ-LKLEDPRVLE 122 (378)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEEeCHHHHHHHH--HHHhh-cCCCCceEec
Confidence 3466789999999999962 488775 999999999999887534344445677664321 11123 577 777765
Q ss_pred CC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCC
Q 013210 172 IS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSI 244 (447)
Q Consensus 172 ~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~ 244 (447)
.+ |+++ + +. +++|.+.+..|.||.+.|+++|++ +++|+++++|.+| +..+++..+ +|+++.|.
T Consensus 123 ~~~g~~~d~~~----i-~~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~--iD~~~~s~ 192 (378)
T PRK03080 123 ADYGSLPDLSA----V-DF-DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWSK--LDVYTFSW 192 (378)
T ss_pred cCCCCCCCHhh----c-CC-CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHHH--CcEEEEeh
Confidence 43 4443 4 22 667999999999999999999999 8899999999998 556666654 79999999
Q ss_pred CccccC-CCCeeEEEEEcChHHHHHHHHHhhhh-----------------hhhcC--CCccHHHH---HHHHccC--C-c
Q 013210 245 SKFISG-GADIIAGAVCGPANLVNSMMDLHQGA-----------------LMLLG--PTMNPKVA---FELSERI--P-H 298 (447)
Q Consensus 245 sK~~g~-~g~~igG~l~~~~~~~~~l~~~~~~~-----------------~~~~g--~~~~~~~a---~~~~~~~--~-~ 298 (447)
||++++ +| + |+++.+++.++++.....+. ....+ ++++.... ..++..+ . .
T Consensus 193 ~K~l~~P~G--~-g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG 269 (378)
T PRK03080 193 QKVLGGEGG--H-GMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGG 269 (378)
T ss_pred hhhCCCCCc--e-EEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCC
Confidence 999976 56 4 99999988887765321000 00011 12222111 1122211 1 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC---HHHHHHHHHHhhcccc
Q 013210 299 LGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET---EEKANRLMNYLQNYAQ 374 (447)
Q Consensus 299 l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~---~~~~~~l~~~l~~~~~ 374 (447)
+..+.++.+++.+++.+.|++.+. .+..+. +.. ..+.+++|.+++ ... ..+...+...
T Consensus 270 ~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~-~~~--------------~s~~i~~~~~~~~~~~~~-~~~~~~l~~~-- 331 (378)
T PRK03080 270 LDALIARTAANASVLYDWAEKTPWATPLVAD-PAT--------------RSNTSVTLDFVDAQAAVD-AAAVAKLLRE-- 331 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccccCC-ccc--------------cCccEEEEEcCCchHHHH-HHHHHHHHHc--
Confidence 555667788888999999988874 443221 110 123589998876 222 2355555432
Q ss_pred cccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 375 FGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 375 ~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
| +.+..|+.+ ...+.+|+|++ ..+++++|+.|.++|+++.
T Consensus 332 -~-i~v~~g~~~-----------------------~~~~~vRis~~-~~~t~~di~~l~~al~~~~ 371 (378)
T PRK03080 332 -N-GAVDIEPYR-----------------------DAPNGLRIWCG-PTVEPADVEALTPWLDWAF 371 (378)
T ss_pred -C-Ceecccccc-----------------------CCCCcEEEecC-CCCCHHHHHHHHHHHHHHH
Confidence 2 344544221 01367999999 9999999999998888754
No 254
>PLN00144 acetylornithine transaminase
Probab=99.84 E-value=3.6e-19 Score=176.82 Aligned_cols=253 Identities=15% Similarity=0.194 Sum_probs=160.2
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC---C------------CCeEEEeCCCchhHHHHHHhhcC--
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCS---S------------GGHVVAARTLYGGTHALLTHFFP-- 160 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~---~------------gd~Vi~~~~~y~~~~~~~~~~~~-- 160 (447)
++...++.++|+++.+.+.++|++||+||+..|++.... . ..+|+.....||+..........
T Consensus 56 ~~~~~~la~~l~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~ 135 (382)
T PLN00144 56 TIPQVELAKRLVASSFADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKE 135 (382)
T ss_pred CHHHHHHHHHHHhcCCCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCc
Confidence 555678888888887778899999999999999985421 0 24799999999887543321100
Q ss_pred --c-cc---CeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCcccc--C--HHHHHHHHHhcCCEEEEeCCCCCCCC
Q 013210 161 --R-AC---NITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVA--N--IPELSRLAHDKGVTVVVDNTFSPLVL 230 (447)
Q Consensus 161 --~-~~---g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~--~--l~~I~~la~~~gi~livD~~~~~~~~ 230 (447)
+ .. -..+.+++..|++++++.++..++++|++|..+||.|... + +++|.++|++||+++|+||+|+++..
T Consensus 136 ~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr 215 (382)
T PLN00144 136 QYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGR 215 (382)
T ss_pred cccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc
Confidence 0 00 0124566777999999988556789999999999965554 2 88999999999999999999966632
Q ss_pred Cc--c---CCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHH
Q 013210 231 SP--A---RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKE 305 (447)
Q Consensus 231 ~~--~---~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~ 305 (447)
.. . ..+.+.-+.|++|.++ +|.++ |++++++++++.+..... ..+..++++.+.++.+.+..++. ....++
T Consensus 216 ~g~~~~~~~~~~~PDi~t~sK~l~-~G~pi-g~v~~~~~~~~~~~~~~~-~~T~~~~pl~~aaa~a~l~~i~~-~~~~~~ 291 (382)
T PLN00144 216 TGYLWAHEAYGVEPDIMTLAKPLA-GGLPI-GAVLVTEKVASAINPGDH-GSTFAGGPLVCNAALAVLDKISK-PGFLAS 291 (382)
T ss_pred cchHhhhhhcCCCCCEEEeccccc-CCcce-EEEEEcHHHHhccCCCCC-CCCCCCCHHHHHHHHHHHHHHhh-chHHHH
Confidence 21 0 1233333666999998 57888 999999998887753322 22234444444444433333321 122334
Q ss_pred HHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 306 HCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 306 ~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
..+..+++.+.|++.-.+ +|... ...|.|.+++++|.. ....+...+..
T Consensus 292 ~~~~g~~l~~~l~~~~~~--~~~~~-------------~vrg~G~~~~l~l~~--~~~~~~~~~~~ 340 (382)
T PLN00144 292 VAKKGEYLRELLRRKLGG--NPHVK-------------EVRGVGLLVGIQLDV--PAGPLVDACRD 340 (382)
T ss_pred HHHHHHHHHHHHHHHHhh--CCCce-------------eeecCceEEEEEecC--ccHHHHHHHHH
Confidence 444444454544432000 11100 112578899999942 23556666664
No 255
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.84 E-value=1.3e-18 Score=162.72 Aligned_cols=325 Identities=15% Similarity=0.171 Sum_probs=217.1
Q ss_pred ccccccccc----CCH-HHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC
Q 013210 62 IEASATFTV----MEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCS 136 (447)
Q Consensus 62 i~~att~~~----~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~ 136 (447)
++.|.-|.- |.+ ++|.+.++.. |...++..-=...+....+||+.+|++.+.+.+++++|+.-||...|..|.+
T Consensus 175 VWCSNDYLgms~Hp~V~~A~~~tl~~h-G~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak 253 (570)
T KOG1360|consen 175 VWCSNDYLGMSRHPEVLDAMHDTLDRH-GAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAK 253 (570)
T ss_pred EEecCccccccCChHHHHHHHHHHHHc-CCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHHHHH
Confidence 455555543 334 6666666543 2212221111122344578999999999999999999999999999887743
Q ss_pred --CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhcc---CCceEEEEEcCCCCCccccCHHHHHHH
Q 013210 137 --SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRL 211 (447)
Q Consensus 137 --~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~---~~t~lV~i~~~~NptG~v~~l~~I~~l 211 (447)
||..|...+..|.+...-+ +..+++-..+..+|++.|++.+++ ..+++|.+|++++++|.+.||++|+++
T Consensus 254 ~lpgcei~SD~gNHASMI~GI-----rns~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDv 328 (570)
T KOG1360|consen 254 KLPGCEIFSDEGNHASMIQGI-----RNSRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDV 328 (570)
T ss_pred HCCCcEEeccccchHHHHHHh-----hhcCCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHH
Confidence 5766666666666555444 224555555567899999988853 347899999999999999999999999
Q ss_pred HHhcCCEEEEeCCC-CCCCCC---------ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcC
Q 013210 212 AHDKGVTVVVDNTF-SPLVLS---------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLG 281 (447)
Q Consensus 212 a~~~gi~livD~~~-~~~~~~---------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g 281 (447)
+++||++..+||++ -++... ..-..+|++++++.|.||. +|||+.....+++.++.+..++.+.+.
T Consensus 329 ah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc----VGGYIAat~~LvDmiRSyAaGFIFTTS 404 (570)
T KOG1360|consen 329 AHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC----VGGYIAATRKLVDMIRSYAAGFIFTTS 404 (570)
T ss_pred HHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccc----ccceehhhhhHHHHHHHhcCceEEecC
Confidence 99999999999998 333211 1111479999999999995 579999999999999998876643333
Q ss_pred CCccHHH-HHHHHccCCcH--HHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013210 282 PTMNPKV-AFELSERIPHL--GLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 358 (447)
Q Consensus 282 ~~~~~~~-a~~~~~~~~~l--~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 358 (447)
.++...+ |..+.+.++.- ....++++++..++.+.|.+.|+.|.. +|. .++.+.+.+
T Consensus 405 LPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~-----~pS---------------HIiPv~vgd 464 (570)
T KOG1360|consen 405 LPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIP-----NPS---------------HIIPVRVGD 464 (570)
T ss_pred CChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccC-----CCc---------------ceeeeeccC
Confidence 3322222 22233333222 223345678888999999998875542 122 288899887
Q ss_pred HHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 359 EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 359 ~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
...+....+.|-. .+++ .|- .+..|... .....+||... ..++.+..+.|.++|..
T Consensus 465 a~l~~~~sd~Li~--~h~i-YvQ------aINyPTV~--------------rG~E~LRiaPT-P~HT~~mm~~lv~~l~~ 520 (570)
T KOG1360|consen 465 AALAKQASDILIS--KHNI-YVQ------AINYPTVA--------------RGTERLRIAPT-PHHTPQMMNILVNALLD 520 (570)
T ss_pred HHHHHHHHHHHHH--hcCe-EEE------eccCCccc--------------ccceeeecCCC-CCCCHHHHHHHHHHHHH
Confidence 6555555555543 1232 211 11223322 23467999999 98899988888888765
Q ss_pred hh
Q 013210 439 MQ 440 (447)
Q Consensus 439 ~~ 440 (447)
.=
T Consensus 521 vw 522 (570)
T KOG1360|consen 521 VW 522 (570)
T ss_pred HH
Confidence 53
No 256
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.84 E-value=4.5e-18 Score=164.09 Aligned_cols=225 Identities=18% Similarity=0.221 Sum_probs=169.2
Q ss_pred CCchHHHHHHHHHHHhCCC--e-EEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC
Q 013210 97 FNPTVLNLSRQMAALEGTE--A-AYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 173 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~--~-~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~ 173 (447)
......++.+.+..+++.+ . .++++|||.|+.+++.+++++||+|++......+.. +.++..+ +|.++..++..
T Consensus 36 F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R--~~~ia~~-~g~~v~~~~~~ 112 (383)
T COG0075 36 FVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGER--FAEIAER-YGAEVVVLEVE 112 (383)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHH--HHHHHHH-hCCceEEEeCC
Confidence 3455678888888888876 3 678899999999999999999999998877654443 3344445 78888777654
Q ss_pred -----CHHHHHHhhc-cCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCC
Q 013210 174 -----DHEMVNSAIV-QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSIS 245 (447)
Q Consensus 174 -----d~~~l~~~i~-~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~s 245 (447)
|+++++++++ .++.++|.+.+.-.+||...|+++|+++|++||+++|+|.+- +...+++.++|+|+++.+..
T Consensus 113 wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQ 192 (383)
T COG0075 113 WGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQ 192 (383)
T ss_pred CCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCc
Confidence 9999999994 356889999999899999999999999999999999999986 67778889999999999999
Q ss_pred ccccCCCCeeEEEEEcChHHHHHHHHH------------hhh----hhhhcCCCccHHHH-HHHHccC--CcHHHHHHHH
Q 013210 246 KFISGGADIIAGAVCGPANLVNSMMDL------------HQG----ALMLLGPTMNPKVA-FELSERI--PHLGLRMKEH 306 (447)
Q Consensus 246 K~~g~~g~~igG~l~~~~~~~~~l~~~------------~~~----~~~~~g~~~~~~~a-~~~~~~~--~~l~~~~~~~ 306 (447)
|.++.|.. + |++..+++.++.+... ... ..+...++.+...+ ..+++.+ +-++.+.+++
T Consensus 193 K~l~~PPG-l-a~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH 270 (383)
T COG0075 193 KALGAPPG-L-AFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARH 270 (383)
T ss_pred hhccCCCc-c-ceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 99996644 3 8888887766655321 110 01111122222222 1222222 3367899999
Q ss_pred HHHHHHHHHHHHhCCCeeeC
Q 013210 307 CHRALIFARRMKKLGLKVLY 326 (447)
Q Consensus 307 ~~~~~~l~~~L~~~~~~v~~ 326 (447)
+++++.+++.++++|+++..
T Consensus 271 ~~~~~a~r~~~~alGl~~~~ 290 (383)
T COG0075 271 RRLAEALRAGLEALGLELFA 290 (383)
T ss_pred HHHHHHHHHHHHHcCCcccc
Confidence 99999999999999986554
No 257
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.84 E-value=2.9e-19 Score=160.89 Aligned_cols=310 Identities=15% Similarity=0.167 Sum_probs=213.1
Q ss_pred HHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHH
Q 013210 74 ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHA 153 (447)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~ 153 (447)
++-.+.+++.=..+++ -.+=.........||.+||++.+.|+.++.+++..||..++.+++.+.|-|...+..|.+..+
T Consensus 88 ~a~~~aleeyGaGlss-vrfIcGtq~iHk~LE~kiAqfh~rED~ilypscfdANag~feail~pedAvfSDeLNhASIId 166 (417)
T KOG1359|consen 88 NAGQKALEEYGAGLSS-VRFICGTQDIHKLLESKIAQFHGREDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIID 166 (417)
T ss_pred HHHHHHHHHhCCCccc-eeEEecchHHHHHHHHHHHHHhCCCceEEeccccccchHHHHHhcChhhhhhccccccchhhh
Confidence 4444555443222332 223233455668999999999999999999999999999999999999999999888888777
Q ss_pred HHHhhcCcccCeeEEEeCCCCHHH-HHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCC
Q 013210 154 LLTHFFPRACNITTTFVDISDHEM-VNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLS 231 (447)
Q Consensus 154 ~~~~~~~~~~g~~~~~v~~~d~~~-l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~ 231 (447)
-+ .+..+ ...+++-|++. +.++. +.+.++|......++.|.+.|+++|.+++++||+++++||+| +++...
T Consensus 167 Gi-rLckr-----y~h~dv~~l~~~l~~a~-k~r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~ 239 (417)
T KOG1359|consen 167 GI-RLCKR-----YRHVDVFDLEHCLISAC-KMRLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGE 239 (417)
T ss_pred hh-HHHhh-----hccchhHHHHHHHHHhh-hheEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecC
Confidence 66 22222 23333334432 22334 557889999999999999999999999999999999999999 433211
Q ss_pred ----cc-C----CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHH---HHccCCcH
Q 013210 232 ----PA-R----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFE---LSERIPHL 299 (447)
Q Consensus 232 ----~~-~----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~---~~~~~~~l 299 (447)
.. . -.+|+...+++|.+|+. .|||..+|+.+++.++.....+ .+.+++++..... +...+-.-
T Consensus 240 tGrGt~E~~~vm~~vdiinsTLgKAlGga---~GGyttgp~~li~llrqr~Rpy--lFSnslppavV~~a~ka~dllm~s 314 (417)
T KOG1359|consen 240 TGRGTAEEFGVMGDVDIINSTLGKALGGA---SGGYTTGPKPLISLLRQRSRPY--LFSNSLPPAVVGMAAKAYDLLMVS 314 (417)
T ss_pred CCCChHHHhCCCCcceehhhhhhhhhcCC---CCCCccCChhHHHHHHhcCCce--eecCCCChhhhhhhHHHHHHHHhh
Confidence 11 1 14899999999999965 3699999999999887654434 3344444322111 11111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccc
Q 013210 300 GLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMA 379 (447)
Q Consensus 300 ~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~ 379 (447)
...+++.+.+.+++++.+...|+.+.. .+|| +..+.+.+.+.+.++.+.|...+ +-+|+
T Consensus 315 ~~~i~~~~a~~qrfr~~me~aGftIsg---~~hP-----------------I~pv~lGda~lA~~~ad~lLk~G-i~Vig 373 (417)
T KOG1359|consen 315 SKEIQSRQANTQRFREFMEAAGFTISG---ASHP-----------------ICPVMLGDARLASKMADELLKRG-IYVIG 373 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceecC---CCCC-----------------ccceecccHHHHHHHHHHHHhcC-ceEEe
Confidence 234566778888999998888876653 2345 78888888877888888887643 22233
Q ss_pred ccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013210 380 VSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 380 vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 441 (447)
+| +|.... ....||+.++ ..+++++|+.+.+|+.++-+
T Consensus 374 fs---------~PvVP~--------------gkariRVqiS-AaHt~edid~~i~Af~~vgr 411 (417)
T KOG1359|consen 374 FS---------YPVVPK--------------GKARIRVQIS-AAHTEEDIDRLIEAFSEVGR 411 (417)
T ss_pred ec---------CCcCCC--------------CceEEEEEEe-hhcCHHHHHHHHHHHHHHHH
Confidence 33 232221 1346899999 88899999999888877643
No 258
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.84 E-value=9.7e-19 Score=172.12 Aligned_cols=281 Identities=10% Similarity=0.056 Sum_probs=185.7
Q ss_pred chHHHHHHHHHHHhCC-C--eE-EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-
Q 013210 99 PTVLNLSRQMAALEGT-E--AA-YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS- 173 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~-~--~~-~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~- 173 (447)
...+++++.++++++. + .+ ++++||+.|+.+++..++.+|+++++......+.+. .....+ .|.. ..+..+
T Consensus 48 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r~--~~~a~~-~g~~-~~~~~~~ 123 (360)
T PRK05355 48 AVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKKA--IKEAKK-YGEV-NVAASSE 123 (360)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHH--HHHHHH-hCCc-eEEeccc
Confidence 6778999999999996 3 24 555899999999999999999887766655443332 233333 5644 332211
Q ss_pred -----CHHHHHH-hhccCCceEEEEEcCCCCCcccc-CHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCC
Q 013210 174 -----DHEMVNS-AIVQGRTKVLYFESISNPTLAVA-NIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSI 244 (447)
Q Consensus 174 -----d~~~l~~-~i~~~~t~lV~i~~~~NptG~v~-~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~ 244 (447)
+..++++ .+ ++++++|++.+..+.||.+. |+++| +|+++++|.++ +..++++.++ |++++|.
T Consensus 124 ~~g~~~~~~~~~~~l-~~~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~~~--d~~~~ss 194 (360)
T PRK05355 124 DDGFTYIPPLDEWQL-SDDAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVSKF--GLIYAGA 194 (360)
T ss_pred ccCCCCCCChhhccC-CCCCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCHHHc--cEEEEec
Confidence 2334444 67 66899999999999999998 77776 89999999998 5566666655 5999999
Q ss_pred CccccCCCCeeEEEEEcChHHHHHHHHH-h--------hhhhhhcCCCccHHHHHH---HHccC--C-cHHHHHHHHHHH
Q 013210 245 SKFISGGADIIAGAVCGPANLVNSMMDL-H--------QGALMLLGPTMNPKVAFE---LSERI--P-HLGLRMKEHCHR 309 (447)
Q Consensus 245 sK~~g~~g~~igG~l~~~~~~~~~l~~~-~--------~~~~~~~g~~~~~~~a~~---~~~~~--~-~l~~~~~~~~~~ 309 (447)
+|++|++| + |+++.+++.++++... . .......+ +++....+. ++..+ . .+..+.++++++
T Consensus 195 qK~lgP~G--l-g~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~-Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l 270 (360)
T PRK05355 195 QKNIGPAG--L-TIVIVREDLLGRALPSIPSMLDYKTHADNDSMYN-TPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEK 270 (360)
T ss_pred cccccCCc--e-EEEEECHHHHhhcccCCChHHHHHHHHhcCCccC-CCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 99999888 4 8899998887665431 1 00000112 222222111 22221 2 466777888999
Q ss_pred HHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccc
Q 013210 310 ALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLM 389 (447)
Q Consensus 310 ~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~ 389 (447)
++++.++|++.+....+.. +.. ..+.+++|.+++......++..+.. .|++ +..|.
T Consensus 271 ~~~l~~~l~~~~~~~~~~~----~~~-----------rs~~v~sf~~~~~~~~~~~~~~~~~---~Gi~-~~~~~----- 326 (360)
T PRK05355 271 AALLYDAIDSSDFYRNPVA----PED-----------RSRMNVPFTLADEELDKKFLAEAKA---AGLV-GLKGH----- 326 (360)
T ss_pred HHHHHHHHHhCCCcccCCC----hhh-----------cCCcEEEEEcCChHHHHHHHHHHHH---CCCc-ccCCC-----
Confidence 9999999999874111111 100 1234899999875333455555443 2322 12220
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013210 390 SCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 390 ~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 441 (447)
. ..+.+|+|++ ..++.++|+.|.++|+++..
T Consensus 327 -----~---------------~~g~vRiS~~-~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 327 -----R---------------SVGGMRASIY-NAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred -----C---------------ccCcEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence 0 1368999999 99999999999999998753
No 259
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.83 E-value=9.5e-19 Score=174.83 Aligned_cols=256 Identities=14% Similarity=0.174 Sum_probs=164.3
Q ss_pred CCchHHHHHHHHHHHhC-CCeEEEeCChHHHHHHHHHHhcC----CC-----CeEEEeCCCchhHHHHHHhhc--Cc-cc
Q 013210 97 FNPTVLNLSRQMAALEG-TEAAYCTASGMSAISSVLMQLCS----SG-----GHVVAARTLYGGTHALLTHFF--PR-AC 163 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g-~~~~~~tsggt~A~~~al~~l~~----~g-----d~Vi~~~~~y~~~~~~~~~~~--~~-~~ 163 (447)
.++...++.++|+++.+ .+.++|++||+||+..|++.... .| ++|+.....||+......... +. ..
T Consensus 80 ~~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~ 159 (408)
T PRK04612 80 YSAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQE 159 (408)
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCccccc
Confidence 34555678888887764 46799999999999999975431 12 368999998888653321110 00 00
Q ss_pred C-----eeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCCc--
Q 013210 164 N-----ITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLSP-- 232 (447)
Q Consensus 164 g-----~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~~-- 232 (447)
+ ..+.+++..|++.++++++.+++.+|+++..+...|.+.+ +++|.++|++||+++|+||+|+++....
T Consensus 160 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~ 239 (408)
T PRK04612 160 GYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTL 239 (408)
T ss_pred CCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCch
Confidence 1 1245567779999999884456777777776655555442 8899999999999999999996653322
Q ss_pred ---cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHH
Q 013210 233 ---ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHR 309 (447)
Q Consensus 233 ---~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~ 309 (447)
...+++..+.|++|.++ +|.++ |+++.++++.+.+..... ..+..++.+...++...+..++. ....++..++
T Consensus 240 ~a~~~~~~~pdi~t~~K~l~-~G~pi-ga~~~~~~~~~~~~~~~~-~~t~~~~p~~~aaa~a~L~~~~~-~~l~~~~~~~ 315 (408)
T PRK04612 240 FAHWQEQVTPDIVTLAKALG-GGFPI-GAMLAGPKVAETMQFGAH-GTTFGGNPLAAAVARVALRKLAS-PQIAANVARQ 315 (408)
T ss_pred hhhhhcCCCCCEEEEcchhc-CCCce-EEEEECHHHHhhhcCCCc-CCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHH
Confidence 12355666777999999 57898 777778888776654322 22233444444444444433322 2345666777
Q ss_pred HHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhhc
Q 013210 310 ALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQN 371 (447)
Q Consensus 310 ~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~l~~~l~~ 371 (447)
.+++.+.|++...+....+ +..|.|.++.+++.. ...+..+.+.+..
T Consensus 316 g~~l~~~l~~l~~~~~~i~---------------~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~ 364 (408)
T PRK04612 316 SAALRAGLEALNAEFGVFA---------------QVRGRGLMLGAVLAPAHAGQAGAILDLAAE 364 (408)
T ss_pred HHHHHHHHHHHHhhCCCee---------------eeeccceEEEEEecCchhhHHHHHHHHHHH
Confidence 7788887776422111101 122688899999862 2345667777765
No 260
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.83 E-value=1.1e-18 Score=173.66 Aligned_cols=277 Identities=12% Similarity=0.170 Sum_probs=171.9
Q ss_pred HHHHHHHHHHh-CC-C-eEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHH-HHHHhh----cCcccCe---eEE
Q 013210 102 LNLSRQMAALE-GT-E-AAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTH-ALLTHF----FPRACNI---TTT 168 (447)
Q Consensus 102 ~~l~~~ia~l~-g~-~-~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~-~~~~~~----~~~~~g~---~~~ 168 (447)
..+++++|+.+ +. + .++|++||++|+..+++... ..+++|++....||+.. ..+... .....+. .+.
T Consensus 69 ~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (375)
T PRK04260 69 NSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFS 148 (375)
T ss_pred CHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeE
Confidence 45666777654 32 2 36899999999999998653 34578999988888643 222110 0000111 123
Q ss_pred EeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCC--cc---C--CCC
Q 013210 169 FVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLS--PA---R--LGA 237 (447)
Q Consensus 169 ~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~--~~---~--~g~ 237 (447)
+.+.+|++++++.+ ++++++|++|+++|++|.+.+ +++|.++|+++|+++|+||+|+++... +. . ...
T Consensus 149 ~~~~~dl~~l~~~l-~~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~p 227 (375)
T PRK04260 149 YAIFNDLNSVKALV-NKNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEP 227 (375)
T ss_pred EeCCCCHHHHHHhc-CCCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCC
Confidence 33456899999988 678899999999999999875 899999999999999999999555321 11 1 234
Q ss_pred eEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHH
Q 013210 238 DVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRM 317 (447)
Q Consensus 238 di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L 317 (447)
|+ .|+||.++ +|.++ |++++++++.+.+..... ..+..++.+.+.++...+..++. ....++..+..+++++.|
T Consensus 228 di--~t~sK~l~-~G~~i-g~~~~~~~~~~~~~~~~~-~~t~~~~~~~~~aa~a~l~~~~~-~~~~~~~~~~~~~~~~~l 301 (375)
T PRK04260 228 DI--FTLAKGLA-NGVPV-GAMLAKSSLGGAFGYGSH-GSTFGGNKLSMAAASATLDIMLT-AGFLEQALENGNYLQEQL 301 (375)
T ss_pred CE--EEeccccc-CCcce-EEEEEcHHHHhhcCCCCC-CCCCCcCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHH
Confidence 54 47999998 57888 999999888777653222 22233344444444444433221 122333334444444444
Q ss_pred ----HhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccc
Q 013210 318 ----KKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSG 393 (447)
Q Consensus 318 ----~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a 393 (447)
.+++..... .+.|.++++++.. ....+.+.+... |+ .+. |.
T Consensus 302 ~~~~~~~~~~~~~-------------------~~~g~~~~~~~~~--~~~~~~~~l~~~---Gi-~v~----------~~ 346 (375)
T PRK04260 302 QKALQDKETVTTV-------------------RGLGYMIGIETTA--DLSQLVEAARDK---GL-IVL----------TA 346 (375)
T ss_pred HHHHhhCCCeeEE-------------------eccceEEEEEecC--cHHHHHHHHHhC---CC-EEe----------cC
Confidence 333211111 1357799999853 245677777652 32 211 10
Q ss_pred cccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 394 SSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 394 ~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
..+.|||++. ...++++++.+.+.|++
T Consensus 347 -----------------~~~~lR~~~~-~~~t~~~i~~~l~~l~~ 373 (375)
T PRK04260 347 -----------------GTNVIRLLPP-LTLTKEEIEQGIAILSE 373 (375)
T ss_pred -----------------CCCEEEEcCC-CccCHHHHHHHHHHHHH
Confidence 1367999997 66667777777766654
No 261
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.83 E-value=3.2e-18 Score=167.60 Aligned_cols=306 Identities=11% Similarity=0.071 Sum_probs=198.6
Q ss_pred HHHHHhhcCCCCCCCCCccccCCCC---chHHHHHHHHHHHhCC-C--eEEEeC-ChHHHHHHHHHHhcCCCCeEEEeCC
Q 013210 74 ETMRRMFAGELGPDRDFFIYSRHFN---PTVLNLSRQMAALEGT-E--AAYCTA-SGMSAISSVLMQLCSSGGHVVAART 146 (447)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~r~~~---~~~~~l~~~ia~l~g~-~--~~~~ts-ggt~A~~~al~~l~~~gd~Vi~~~~ 146 (447)
+.+.+++...-..-.+.+..+.... ...+++++.++++++. + .++|++ |||+|+++++..++.+|+++++...
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~ 88 (349)
T TIGR01364 9 EQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVT 88 (349)
T ss_pred HHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEEC
Confidence 5666666542211234565665555 6788999999999995 2 377775 4999999999999988998877766
Q ss_pred CchhHHHHHHhhcCcccCeeEEEeC---------CCCHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCC
Q 013210 147 LYGGTHALLTHFFPRACNITTTFVD---------ISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGV 217 (447)
Q Consensus 147 ~y~~~~~~~~~~~~~~~g~~~~~v~---------~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi 217 (447)
...+.+. .....+ .|. +..+. ..++++++ + ++++++|.+.+..+.||...+ ++++.+++
T Consensus 89 G~fg~r~--~~~a~~-~g~-~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~v~~th~ETstGv~~~-----~l~~~~~~ 156 (349)
T TIGR01364 89 GAWSKKA--AKEAKK-YGV-VNVVASGKEGNYTKIPDPSTWE--I-SEDAAYVHYCANETIHGVEFR-----ELPDVKNA 156 (349)
T ss_pred CHHHHHH--HHHHHH-hCC-cEEEeccccCCCCCCCCHHhcC--C-CCCCCEEEEcCCCCcccEecc-----eecccCCC
Confidence 5544433 233334 566 44433 12455444 3 568999999999999999877 66777899
Q ss_pred EEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHH-------hh--hhhhhcCCCccH
Q 013210 218 TVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDL-------HQ--GALMLLGPTMNP 286 (447)
Q Consensus 218 ~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~-------~~--~~~~~~g~~~~~ 286 (447)
++++|.++ +..+++..++ |++++|.+|++|++| + |+++.+++.++++... .. ......+ +++.
T Consensus 157 l~iVDavss~g~~~id~~~~--d~~~~ssqK~lgP~G--l-g~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Tp~~ 230 (349)
T TIGR01364 157 PLVADMSSNILSRPIDVSKF--GLIYAGAQKNIGPAG--L-TVVIVRKDLLGRASRITPSMLNYKIHAENDSMYN-TPPT 230 (349)
T ss_pred eEEEEccccccCccCCHHHc--cEEEEecccccCCCc--e-EEEEECHHHHhhcccCCCCcchHHHHHhcCCCCC-CCcH
Confidence 99999998 5566666654 599999999999888 4 8899998887765321 10 0001122 2222
Q ss_pred HHHHH---HHccC--C-cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHH
Q 013210 287 KVAFE---LSERI--P-HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEE 360 (447)
Q Consensus 287 ~~a~~---~~~~~--~-~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~ 360 (447)
...+. ++..+ . .+..+.+++.++++++.+.|++++. +..+... |.. ....+++|.+++..
T Consensus 231 ~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~g-l~~~~~~--~~~-----------rs~~v~sf~~~~~~ 296 (349)
T TIGR01364 231 FAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNG-FYRNPVD--PRN-----------RSRMNVVFTLGNEE 296 (349)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCC-eeccCCC--HHH-----------cCCeEEEEecCChh
Confidence 22111 22211 2 3667778889999999999999853 2111110 110 12347999988542
Q ss_pred HHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 361 KANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 361 ~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
....++..+.. .|+ ++..|.. ..+.+|+|++ ..++.++|+.|.++|+++.
T Consensus 297 ~~~~~~~~~~~---~Gi-~~~~~~~-------------------------~~g~vRvS~~-~~nt~edid~l~~al~~~~ 346 (349)
T TIGR01364 297 LEKRFLKEAEE---RGL-VSLKGHR-------------------------SVGGMRASIY-NAMPLEGVQALVDFMKEFQ 346 (349)
T ss_pred HhHHHHHHHHH---CCC-cccCCcc-------------------------ccCeeEEECc-CCCCHHHHHHHHHHHHHHH
Confidence 22445444443 232 3332210 1367999999 9999999999999999875
Q ss_pred h
Q 013210 441 D 441 (447)
Q Consensus 441 ~ 441 (447)
+
T Consensus 347 ~ 347 (349)
T TIGR01364 347 K 347 (349)
T ss_pred H
Confidence 4
No 262
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.82 E-value=1.4e-18 Score=175.54 Aligned_cols=222 Identities=14% Similarity=0.157 Sum_probs=146.3
Q ss_pred CCchHHHHHHHHHHHhC-CCeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhh------------cC-
Q 013210 97 FNPTVLNLSRQMAALEG-TEAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHF------------FP- 160 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g-~~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~------------~~- 160 (447)
.++...+++++|+++.. .+.++|++||++|+..+++... ...++||+..+.|++....+... .+
T Consensus 86 ~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~ 165 (423)
T TIGR00713 86 PTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPG 165 (423)
T ss_pred CCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCC
Confidence 44556789999999875 3679999999999999998542 24579999999999975433110 00
Q ss_pred --cccCeeEEEeCCCCHHHHHHhhcc--CCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCCc
Q 013210 161 --RACNITTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLSP 232 (447)
Q Consensus 161 --~~~g~~~~~v~~~d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~~ 232 (447)
...+..+..++..|++++++++.+ +++++|+++...+.+|.+.+ +++|.++|++||+++|+||+|+++....
T Consensus 166 ~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~ 245 (423)
T TIGR00713 166 VPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL 245 (423)
T ss_pred CCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc
Confidence 001112344556689999998832 57899999865555898876 7899999999999999999996663211
Q ss_pred ------cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHh--hhhhhhcCCCccHHHHHHHHccCCc--HHHH
Q 013210 233 ------ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH--QGALMLLGPTMNPKVAFELSERIPH--LGLR 302 (447)
Q Consensus 233 ------~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~--~~~~~~~g~~~~~~~a~~~~~~~~~--l~~~ 302 (447)
.....|+ .+++|.++ .|.++ |++++++++++.+.... ....+..++.+.+.++.+.+..++. +.+.
T Consensus 246 ~~~~~~~~~~pDi--~t~sK~l~-~G~pi-g~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~ 321 (423)
T TIGR00713 246 GGAQEYFGVEPDL--TTLGKIIG-GGLPV-GAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTE 321 (423)
T ss_pred chhHHHhCCCcch--hhhhhhhc-CCCce-eeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHH
Confidence 1123454 47999999 78888 99999999988875321 1112234444444444444443322 2222
Q ss_pred -HHHHHHHHHHHHHHHHhCCC
Q 013210 303 -MKEHCHRALIFARRMKKLGL 322 (447)
Q Consensus 303 -~~~~~~~~~~l~~~L~~~~~ 322 (447)
.+.....++.|.+.+++++.
T Consensus 322 ~~~~~~~~~~~l~~~~~~~~~ 342 (423)
T TIGR00713 322 LDELAKRLAEGLSEVLEDTGI 342 (423)
T ss_pred HHHHHHHHHHHHHHHHHhcCC
Confidence 23334455556655666554
No 263
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=4e-18 Score=172.40 Aligned_cols=257 Identities=12% Similarity=0.147 Sum_probs=160.8
Q ss_pred CCCchHHHHHHHHHHHh-C-CCeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhc---C---cccC-
Q 013210 96 HFNPTVLNLSRQMAALE-G-TEAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFF---P---RACN- 164 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~-g-~~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~---~---~~~g- 164 (447)
..++...++.++|+++. + .+.++|++||++|+..|++... ....+|+.....||+......... . +..+
T Consensus 83 ~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~ 162 (433)
T PRK08117 83 IYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQP 162 (433)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCC
Confidence 34567788999999997 2 4679999999999999998532 223578888888888543321100 0 0000
Q ss_pred --eeEEEeCCC-----------------CHHHHHHhhc----cCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCC
Q 013210 165 --ITTTFVDIS-----------------DHEMVNSAIV----QGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGV 217 (447)
Q Consensus 165 --~~~~~v~~~-----------------d~~~l~~~i~----~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi 217 (447)
..+.+++.. +++++++.++ .+++.+|++|.+....|.+.| +++|.++|++||+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~ 242 (433)
T PRK08117 163 LLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGI 242 (433)
T ss_pred CCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 012222221 4556666653 246889999999999999988 9999999999999
Q ss_pred EEEEeCCCCCCCCC-----ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHH
Q 013210 218 TVVVDNTFSPLVLS-----PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFEL 292 (447)
Q Consensus 218 ~livD~~~~~~~~~-----~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~ 292 (447)
++|+||+|+++... ...++++..+.|++|.+| .|.++ |++++++++++.+..... ..+..+++++..++.+.
T Consensus 243 llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~lg-~G~pi-gav~~~~~i~~~~~~~~~-~~T~~~np~~~aaa~a~ 319 (433)
T PRK08117 243 LLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIA-SGLPL-SAVVASKELMEQWPLGSH-GTTFGGNPVACAAALAT 319 (433)
T ss_pred EEEEecchhccCccccchhHhhcCCCCCEeehhhhcc-CCCcc-eeEEEcHHHHhhccCCCC-CCCCCcCHHHHHHHHHH
Confidence 99999999665321 122344444567999999 67888 788888888877643222 22233444444444444
Q ss_pred HccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC------HHHHHHHH
Q 013210 293 SERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET------EEKANRLM 366 (447)
Q Consensus 293 ~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~------~~~~~~l~ 366 (447)
+..++. ....++..++.+++.+.|++...+ +|... +..|.|.++.+++.. ......+.
T Consensus 320 L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~--~~~~~-------------~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~ 383 (433)
T PRK08117 320 LEVIKE-EKLLDNANEMGAYALERLEVLKEK--HPVIG-------------DVRGIGLMIGIEIVDPDGEPDGDAVEKIL 383 (433)
T ss_pred HHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc--CCcee-------------eeecCCcEEEEEEecCCCCcchHHHHHHH
Confidence 433321 124455666667777777654211 11101 112678899999842 23345566
Q ss_pred HHhhc
Q 013210 367 NYLQN 371 (447)
Q Consensus 367 ~~l~~ 371 (447)
..+..
T Consensus 384 ~~l~~ 388 (433)
T PRK08117 384 DKCLE 388 (433)
T ss_pred HHHHH
Confidence 66654
No 264
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.82 E-value=4.5e-18 Score=170.83 Aligned_cols=292 Identities=15% Similarity=0.173 Sum_probs=187.6
Q ss_pred CCchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcC----CC-CeEEEeCCCchhHHHHHHhhcC-----cc--
Q 013210 97 FNPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCS----SG-GHVVAARTLYGGTHALLTHFFP-----RA-- 162 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~----~g-d~Vi~~~~~y~~~~~~~~~~~~-----~~-- 162 (447)
.++...++.++|+++... +.++|++||+||+..|++.... .| .+||+....||+........-. ..
T Consensus 115 ~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~ 194 (442)
T TIGR03372 115 LDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFM 194 (442)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCC
Confidence 466677888888888643 5699999999999999985421 23 5799999988887543311100 00
Q ss_pred -cCeeEEEeCCCCHHHHHHhhc-----cCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCC--
Q 013210 163 -CNITTTFVDISDHEMVNSAIV-----QGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVL-- 230 (447)
Q Consensus 163 -~g~~~~~v~~~d~~~l~~~i~-----~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~-- 230 (447)
....+..++.+|.+++++.++ ..++.+|++|++....|.+.| +++|.++|++||+++|+||+|+++..
T Consensus 195 p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG 274 (442)
T TIGR03372 195 PLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTG 274 (442)
T ss_pred CCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccc
Confidence 112345667778888877773 146889999999999999887 99999999999999999999965531
Q ss_pred ---Cc--cCCCCeEEEeCCCccccCCC-CeeEEEEEcChHHHHHHHHHh-hhhhhhcCCCccHHHHHHHHccCCcHHHHH
Q 013210 231 ---SP--ARLGADVVVHSISKFISGGA-DIIAGAVCGPANLVNSMMDLH-QGALMLLGPTMNPKVAFELSERIPHLGLRM 303 (447)
Q Consensus 231 ---~~--~~~g~di~~~S~sK~~g~~g-~~igG~l~~~~~~~~~l~~~~-~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~ 303 (447)
.. .....|+++ ++|.+|+ | .++ |+++.++++.+.+.... ....+..|++.+..++.+.+..++. ....
T Consensus 275 ~~~a~e~~gv~PDivt--~gK~lg~-G~~Pi-gavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~-~~l~ 349 (442)
T TIGR03372 275 KMFACEHEGVQPDILC--LAKALGG-GVMPI-GATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLE-KNLP 349 (442)
T ss_pred cchhhhhcCCCCCeee--ehhhhcC-Ccccc-eEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHh-ccHH
Confidence 11 122357665 8999984 5 467 66777888887763211 1122233444444444444433321 1123
Q ss_pred HHHHHHHHHHHHHHHhCCCeeeCC-CCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccc
Q 013210 304 KEHCHRALIFARRMKKLGLKVLYP-GLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSL 382 (447)
Q Consensus 304 ~~~~~~~~~l~~~L~~~~~~v~~p-~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~ 382 (447)
++..+..++|.+.|++...+ +| .+. +..|.|.++.+++...+....+.+.+.. .|++ ++.
T Consensus 350 ~~~~~~G~~l~~~L~~l~~~--~~~~i~-------------~vRG~Gl~~giel~~~~~~~~i~~~l~~---~Gvl-~~~ 410 (442)
T TIGR03372 350 AQAAIKGDFLLDGFQQLAAE--YPDLII-------------EARGKGLLMAIEFRDNEIGYAFAKELFQ---QNIL-VAG 410 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHh--CCCceE-------------EEecceEEEEEEeCChHHHHHHHHHHHH---CCcE-Eee
Confidence 44555666666666553211 11 000 1226788999999865556677777775 2332 211
Q ss_pred cCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013210 383 GYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 383 G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 438 (447)
. +...+.+||++. ...+++.++.+.++|++
T Consensus 411 ~-------------------------~~~~~~lr~~Pp-l~~t~~~id~~~~~l~~ 440 (442)
T TIGR03372 411 T-------------------------LNNAKSIRIEPP-LTITIEQCALVIKAAKD 440 (442)
T ss_pred c-------------------------CCCCCEEEEECC-cccCHHHHHHHHHHHHH
Confidence 0 111367999999 88888888888887765
No 265
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=2.5e-18 Score=152.46 Aligned_cols=271 Identities=13% Similarity=0.144 Sum_probs=185.7
Q ss_pred CCCeEEEeCChHHHHHHHHHHhcCCC-CeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhcc-C
Q 013210 113 GTEAAYCTASGMSAISSVLMQLCSSG-GHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQ-G 185 (447)
Q Consensus 113 g~~~~~~tsggt~A~~~al~~l~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~-~ 185 (447)
-.+.+.+.-|+.|.+.++++..+.|| ++|+...|+|.-+.-.. ...+++++.++.+ +.+++.+.++. .
T Consensus 85 t~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A-----~iNd~eVvkvpl~pdF~lnvdai~evl~~ds 159 (375)
T KOG0633|consen 85 TSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDA-----AINDAEVVKVPLNPDFSLNVDAIAEVLELDS 159 (375)
T ss_pred CccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEe-----ecCCceEEEecCCCCccccHHHHHHHHhccc
Confidence 35678888999999999999999999 78999999998764332 2357888887754 78888887743 3
Q ss_pred CceEEEEEcCCCCCccccCHHHHHHHHHhc-CCEEEEeCCCCCCCC--C----ccCCCCeEEEeCCCccccCCCCeeEEE
Q 013210 186 RTKVLYFESISNPTLAVANIPELSRLAHDK-GVTVVVDNTFSPLVL--S----PARLGADVVVHSISKFISGGADIIAGA 258 (447)
Q Consensus 186 ~t~lV~i~~~~NptG~v~~l~~I~~la~~~-gi~livD~~~~~~~~--~----~~~~g~di~~~S~sK~~g~~g~~igG~ 258 (447)
.++++++++|+||||.+...+.|.++.+-. |.++++||+|-.|.. + ..++..-+++.++||.+|..|.|+ |+
T Consensus 160 ~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRv-G~ 238 (375)
T KOG0633|consen 160 KIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRV-GY 238 (375)
T ss_pred cceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCcceeEe-ec
Confidence 789999999999999999888888887654 799999999944432 2 123467899999999999999999 99
Q ss_pred EEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhH
Q 013210 259 VCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSE--RIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHE 336 (447)
Q Consensus 259 l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~ 336 (447)
-+.+..+++-+......+ .-+......|..++. ..+.+......+.+.+.+|...|.+.++--.+|+-
T Consensus 239 ~~~~~~ia~iln~~KaPY---NiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg------- 308 (375)
T KOG0633|consen 239 GAFPLSIAEILNRAKAPY---NISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGG------- 308 (375)
T ss_pred ccccHHHHHHHHhccCCc---cccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCc-------
Confidence 999999888887766532 222233334444444 34556666667788888898899887662223431
Q ss_pred HHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCe
Q 013210 337 LLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGL 414 (447)
Q Consensus 337 l~~~~~~~~~g~g~~~~~~l~~~--~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~ 414 (447)
....++-+++.+. ..+..+..++.. ..|+ .|.+-+.+ +.| .|.
T Consensus 309 ----------~daNFiLi~v~~~~n~~akkly~q~at--~~gV-vVRfrgse-----~~c-----------------~G~ 353 (375)
T KOG0633|consen 309 ----------SDANFILIEVTGGDNGMAKKLYKQDAT--KMGV-VVRFRGSE-----EGC-----------------KGY 353 (375)
T ss_pred ----------ccccEEEEEEcCCCcHHHHHHHHHHHH--hcce-EEEEcCCc-----ccc-----------------cee
Confidence 1233777777622 223344433322 1332 33333221 222 388
Q ss_pred EEEEeCCCCCHHHHHHHHHH
Q 013210 415 VRMSVGYLGTLDQRWSQFEK 434 (447)
Q Consensus 415 iRiS~g~~~~~~~~i~~l~~ 434 (447)
+||++|..|+..-+++-|.+
T Consensus 354 lRitvGt~EentvL~k~~K~ 373 (375)
T KOG0633|consen 354 LRITVGTPEENTVLMKCLKQ 373 (375)
T ss_pred EEEEcCCcccchHHHHHHHh
Confidence 99999954666655555544
No 266
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.81 E-value=3.1e-18 Score=170.69 Aligned_cols=289 Identities=14% Similarity=0.155 Sum_probs=177.5
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC------CC-CeEEEeCCCchhHHHHHHhhcCcc-----c--
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCS------SG-GHVVAARTLYGGTHALLTHFFPRA-----C-- 163 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~------~g-d~Vi~~~~~y~~~~~~~~~~~~~~-----~-- 163 (447)
++...++.+.+++..+.+.++|++||++|+..+++.+.. +| ++||+.+..||+............ .
T Consensus 77 ~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~ 156 (395)
T PRK03715 77 NEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAP 156 (395)
T ss_pred CHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCC
Confidence 444456666666665567899999999999999987641 23 578888888877543221111100 0
Q ss_pred -CeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCC-------C
Q 013210 164 -NITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVL-------S 231 (447)
Q Consensus 164 -g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~-------~ 231 (447)
-..+..++..|++++++.+ .+++++|++|+++++.|.+.| +++|.++|++||+++|+||+|+++.. .
T Consensus 157 ~~~~~~~~~~~d~~~l~~~l-~~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~ 235 (395)
T PRK03715 157 QVPGFPKAELNDIASVEKLI-TDKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYE 235 (395)
T ss_pred CCCCceeeCCchHHHHHHHc-CCCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHh
Confidence 0012333456899999998 678999999999999999887 99999999999999999999965521 1
Q ss_pred ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHH
Q 013210 232 PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRAL 311 (447)
Q Consensus 232 ~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~ 311 (447)
-.....|++ +++|.+|+ |.++ |++++++++.. +..... ..+..|++....++.+.+..++. ....++.+++.+
T Consensus 236 ~~gv~PDi~--t~gK~lg~-G~p~-~av~~~~~i~~-~~~~~~-~~T~~g~pl~~aaala~L~~l~~-~~l~~~~~~~g~ 308 (395)
T PRK03715 236 LSGIEPDIM--TLGKGIGG-GVPL-AALLAKAEVAV-FEAGDQ-GGTYNGNPLMTAVGVAVISQLLA-PGFLEGVRARGE 308 (395)
T ss_pred hcCCCCcee--eehhhhhC-Ccce-EEEEEcccccc-ccCCCc-CCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHH
Confidence 112245664 57899996 5677 66677777742 211111 11233333333333333333321 235566777778
Q ss_pred HHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccc
Q 013210 312 IFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSC 391 (447)
Q Consensus 312 ~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~ 391 (447)
+|.+.|++...+.. +. +..|.|.++.+++.+.. ...+.+.+......|++. .
T Consensus 309 ~l~~~L~~l~~~~~---i~-------------~vrG~Glm~~i~l~~~~-~~~~~~~~~~~~~~Gi~~---~-------- 360 (395)
T PRK03715 309 YLKEKLLELSEERG---LE-------------GERGEGLLRALLLGKDI-GPQIVEKARDMQPDGLLL---N-------- 360 (395)
T ss_pred HHHHHHHHHhhcCC---cC-------------eEEcceeEEEEEecCch-HHHHHHHHHhccCCCEEE---e--------
Confidence 88888876422111 11 11267889999997531 233333333210113211 0
Q ss_pred cccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 392 SGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 392 ~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
+.....|||++. ...+++.|+.+.++|++.-
T Consensus 361 -----------------~~~~~~lR~~p~-l~~t~~ei~~~~~~l~~~l 391 (395)
T PRK03715 361 -----------------APRPNLLRFMPA-LNVTTEEIDQMIAMLRSVL 391 (395)
T ss_pred -----------------ecCCCEEEEeCC-cccCHHHHHHHHHHHHHHH
Confidence 011357999999 8777777777777776543
No 267
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.81 E-value=5.1e-18 Score=171.53 Aligned_cols=257 Identities=14% Similarity=0.208 Sum_probs=166.4
Q ss_pred CCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcC----CC-CeEEEeCCCchhHHHHHHhhcCc--------
Q 013210 97 FNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLCS----SG-GHVVAARTLYGGTHALLTHFFPR-------- 161 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~~----~g-d~Vi~~~~~y~~~~~~~~~~~~~-------- 161 (447)
.++...++.++|+++.. .+.++|++||+||+..|++.... +| .+||.....||+........-..
T Consensus 122 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~ 201 (459)
T PRK11522 122 LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFM 201 (459)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCC
Confidence 46667788888988864 35799999999999999985431 22 36899998898865433111000
Q ss_pred ccCeeEEEeCCCCHHHHHHhhcc-----CCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCC--
Q 013210 162 ACNITTTFVDISDHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVL-- 230 (447)
Q Consensus 162 ~~g~~~~~v~~~d~~~l~~~i~~-----~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~-- 230 (447)
.....+..++..|.+++++.++. +++.+|++|.+....|.+.| ++++.++|++||+++|+||+++++..
T Consensus 202 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG 281 (459)
T PRK11522 202 PLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTG 281 (459)
T ss_pred CCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccc
Confidence 00112345666688888887731 46789999999999999887 99999999999999999999965521
Q ss_pred -----CccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHh-hhhhhhcCCCccHHHHHHHHccCCcHHHHHH
Q 013210 231 -----SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH-QGALMLLGPTMNPKVAFELSERIPHLGLRMK 304 (447)
Q Consensus 231 -----~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~-~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~ 304 (447)
.-.....|++ +++|.+|+.-.++ |+++.++++.+.+.... ....+..|++++..++.+.+..++.- ...+
T Consensus 282 ~~~a~e~~gv~PDiv--t~gK~lggG~~Pi-gav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~-~l~~ 357 (459)
T PRK11522 282 KMFACEHENVQPDIL--CLAKALGGGVMPI-GATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQ-NLPA 357 (459)
T ss_pred hhhhhhccCCCCCEE--EechhhhCCCccc-eeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcc-hHHH
Confidence 1112235666 5899999532467 66667778777653211 11223344444444444444444331 3456
Q ss_pred HHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 305 EHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 305 ~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
+..++.++|.+.|+++..+ +|..-. +..|.|.++.+++...+.+..+...|..
T Consensus 358 ~~~~~g~~l~~~L~~l~~~--~~~~i~------------~VrG~Gl~~giel~~~~~~~~i~~~l~~ 410 (459)
T PRK11522 358 QAEQKGDYLLDGFRQLARE--YPDLVQ------------EARGKGMLMAIEFVDNEIGYNFASEMFR 410 (459)
T ss_pred HHHHHHHHHHHHHHHHHHh--CCCcee------------eEEeceeEEEEEecCchHHHHHHHHHHH
Confidence 6677777888877654211 110000 1226788999999865556677777765
No 268
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.81 E-value=1e-18 Score=153.15 Aligned_cols=154 Identities=19% Similarity=0.231 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHh--CCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHH-HHHHhhcCcccCeeEEEeCCC----
Q 013210 101 VLNLSRQMAALE--GTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTH-ALLTHFFPRACNITTTFVDIS---- 173 (447)
Q Consensus 101 ~~~l~~~ia~l~--g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~-~~~~~~~~~~~g~~~~~v~~~---- 173 (447)
.+++++.+++++ +.+.+++++||++|+.++++++..++++|+++.+.|++.. ..+ .. .|.++..++.+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----~~-~g~~~~~v~~~~~~~ 76 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAA----EL-AGAKPVPVPVDDAGY 76 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHH----Hh-cCCEEEEeccCCCCc
Confidence 468999999999 8888999999999999999999888999999999999887 433 22 68888877754
Q ss_pred -CH--HHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCC-----CccCCCCeEEEeCCC
Q 013210 174 -DH--EMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVL-----SPARLGADVVVHSIS 245 (447)
Q Consensus 174 -d~--~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~-----~~~~~g~di~~~S~s 245 (447)
+. +.+++....++++++++++++|++|...|+++|.++|+++|+++|+|++|..+.. ++...++|+++.|+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s~~ 156 (170)
T cd01494 77 GGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLH 156 (170)
T ss_pred cchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEEcc
Confidence 11 2454444357899999999999999999999999999999999999999944332 244568999999999
Q ss_pred ccccCCCCeeEEEEEcC
Q 013210 246 KFISGGADIIAGAVCGP 262 (447)
Q Consensus 246 K~~g~~g~~igG~l~~~ 262 (447)
|++++++ . |+++.+
T Consensus 157 K~~~~~~--~-G~l~~~ 170 (170)
T cd01494 157 KNLGGEG--G-GVVIVK 170 (170)
T ss_pred cccCCCc--e-EEEEeC
Confidence 9999854 4 888653
No 269
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.81 E-value=1.2e-17 Score=168.47 Aligned_cols=292 Identities=12% Similarity=0.156 Sum_probs=183.2
Q ss_pred CCCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcC-------CC-CeEEEeCCCchhHHHHHHhhcCc----
Q 013210 96 HFNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHALLTHFFPR---- 161 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~~-------~g-d~Vi~~~~~y~~~~~~~~~~~~~---- 161 (447)
..++...++.++|+++.. .+.++|++||+||+..|++.... +| .+||.....||+...........
T Consensus 82 ~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~ 161 (423)
T PRK05964 82 FTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMH 161 (423)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCcccc
Confidence 345666788889988874 56899999999999999985421 23 58999999998865443211100
Q ss_pred --ccC--eeEEEeCC--CC-----HHHHHHhhc--cCCceEEEEEc-CCCCCccccC----HHHHHHHHHhcCCEEEEeC
Q 013210 162 --ACN--ITTTFVDI--SD-----HEMVNSAIV--QGRTKVLYFES-ISNPTLAVAN----IPELSRLAHDKGVTVVVDN 223 (447)
Q Consensus 162 --~~g--~~~~~v~~--~d-----~~~l~~~i~--~~~t~lV~i~~-~~NptG~v~~----l~~I~~la~~~gi~livD~ 223 (447)
..+ ..+..++. +| ++++++.+. .+++.+|++|. +++..|.+.+ +++|.++|++||+++|+||
T Consensus 162 ~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DE 241 (423)
T PRK05964 162 ALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDE 241 (423)
T ss_pred ccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 000 11233333 24 788888773 24678999998 6888887764 8899999999999999999
Q ss_pred CCCCCCC-------CccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHH---hh--hhhhhcCCCccHHHHHH
Q 013210 224 TFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDL---HQ--GALMLLGPTMNPKVAFE 291 (447)
Q Consensus 224 ~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~---~~--~~~~~~g~~~~~~~a~~ 291 (447)
+|+++.. .......|++ +++|.+++++.++ |+++.++++.+.+... .. ...+..++.++..++.+
T Consensus 242 v~tg~gr~G~~~a~~~~~v~pDi~--~~~K~l~gG~~p~-~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a 318 (423)
T PRK05964 242 IATGFGRTGTLFACEQAGVSPDIM--CLSKGLTGGYLPL-AATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANA 318 (423)
T ss_pred hhhCCCcCcchhHHHhcCCCCCee--eeehhhhcCcccc-eEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHH
Confidence 9965532 1112235655 5789998665777 7788899998877531 00 11112233333333333
Q ss_pred HHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHH---HHHHHHHH
Q 013210 292 LSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEE---KANRLMNY 368 (447)
Q Consensus 292 ~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~---~~~~l~~~ 368 (447)
.+..++. ....++..++.+++.+.|++... +|.+. +..|.|.++.+++.+.. ....+...
T Consensus 319 ~l~~l~~-~~~~~~~~~~g~~l~~~l~~l~~---~~~i~-------------~vrg~Gl~~~i~l~~~~~~~~~~~l~~~ 381 (423)
T PRK05964 319 SLDLFED-EPVLERVAALSAGLAEGLEPFRD---LPGVA-------------DVRVLGAIGAVELDRPVLERDGPALRAF 381 (423)
T ss_pred HHHHHHh-cCHHHHHHHHHHHHHHHHHhhcc---CCCeE-------------EeecccEEEEEEeccCcchhHHHHHHHH
Confidence 3332211 12445666777778887776521 12211 11257889999997432 25567777
Q ss_pred hhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 369 LQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 369 l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
|.. .|++. + + ..+.|||++. ...++++|+.+.++|++.-
T Consensus 382 l~~---~Gv~v-~----------~------------------~~~~lR~~p~-l~~t~edId~~v~~l~~al 420 (423)
T PRK05964 382 ALE---RGVLL-R----------P------------------LGNTIYLMPP-YIITAEELDRITDAIVEVA 420 (423)
T ss_pred HHH---CCeEE-E----------e------------------cCCEEEEeCC-cccCHHHHHHHHHHHHHHH
Confidence 764 23221 1 0 0146999999 8778888887777776553
No 270
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.81 E-value=9.7e-18 Score=168.60 Aligned_cols=294 Identities=13% Similarity=0.173 Sum_probs=180.4
Q ss_pred CCCCchHHHHHHHHHHHhC---CCeEEEeCChHHHHHHHHHHhcC-CC-CeEEEeCCCchhHHHHHHhhcC----cccCe
Q 013210 95 RHFNPTVLNLSRQMAALEG---TEAAYCTASGMSAISSVLMQLCS-SG-GHVVAARTLYGGTHALLTHFFP----RACNI 165 (447)
Q Consensus 95 r~~~~~~~~l~~~ia~l~g---~~~~~~tsggt~A~~~al~~l~~-~g-d~Vi~~~~~y~~~~~~~~~~~~----~~~g~ 165 (447)
...++...++.++|+++.. .+.++|++||+||+..|++.... .| .+|+.....||+.......... ...+.
T Consensus 79 ~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~ 158 (421)
T PRK09792 79 IVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGF 158 (421)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCC
Confidence 3456666788888888764 25799999999999999976432 23 5789999989886433211100 00111
Q ss_pred -----eEEEeCCC----------CHHHHHHhhc----cCCceEEEEEcCCCCCcccc-C---HHHHHHHHHhcCCEEEEe
Q 013210 166 -----TTTFVDIS----------DHEMVNSAIV----QGRTKVLYFESISNPTLAVA-N---IPELSRLAHDKGVTVVVD 222 (447)
Q Consensus 166 -----~~~~v~~~----------d~~~l~~~i~----~~~t~lV~i~~~~NptG~v~-~---l~~I~~la~~~gi~livD 222 (447)
.+..++.. +++.+++.++ .+++++|++|.+++++|.+. | +++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~D 238 (421)
T PRK09792 159 GPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIAD 238 (421)
T ss_pred CCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 12333331 3477888774 24688999999999999765 5 889999999999999999
Q ss_pred CCCCCCCCCc-----cCC--CCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHcc
Q 013210 223 NTFSPLVLSP-----ARL--GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER 295 (447)
Q Consensus 223 ~~~~~~~~~~-----~~~--g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~ 295 (447)
|+++++.... ..+ ..| +.|++|.++ +|.++ |++++++++++.+..... ..+..++++.+.++.+.+..
T Consensus 239 Ev~tg~gr~G~~~a~~~~~~~pD--i~t~gK~l~-~G~pi-gav~~~~~i~~~~~~~~~-~~T~~gnpl~~aaa~a~l~~ 313 (421)
T PRK09792 239 EVQSGFARTGKLFAMDHYADKPD--LMTMAKSLA-GGMPL-SGVVGNANIMDAPAPGGL-GGTYAGNPLAVAAAHAVLNI 313 (421)
T ss_pred ccccCCCCCCchhHHHhcCCCCc--EEEeehhhc-CCCce-EEEEEcHHHHhccCCCCc-CCCCCCCHHHHHHHHHHHHH
Confidence 9996663321 122 345 466899999 57898 888999998877653322 22344555555444444433
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-------HHHHHHHHH
Q 013210 296 IPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-------EKANRLMNY 368 (447)
Q Consensus 296 ~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-------~~~~~l~~~ 368 (447)
++.- ...++..+..+++.+.|+++..+ +|.. . ...|.|.++++++.+. .....+...
T Consensus 314 l~~~-~~~~~~~~~g~~l~~~l~~l~~~--~p~v-~------------~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~ 377 (421)
T PRK09792 314 IDKE-SLCERANQLGQRLKNTLIDAKES--VPAI-A------------AVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQR 377 (421)
T ss_pred HHhh-hHHHHHHHHHHHHHHHHHHHHHh--CCCc-c------------eecccceEEEEEecCCccCCcchHHHHHHHHH
Confidence 3221 22334444455555555432110 1110 0 1226799999999743 234556666
Q ss_pred hhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 369 LQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 369 l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+.. .|+ .+. + .|...+.|||.+. ...+++.++.+.++|++.
T Consensus 378 ~~~---~Gv-~i~----------~---------------~g~~~~~irl~P~-l~i~~~ei~~~~~~l~~~ 418 (421)
T PRK09792 378 ALA---QGL-LLL----------T---------------CGAYGNVIRFLYP-LTIPDAQFDAAMKILQDA 418 (421)
T ss_pred HHH---CCc-EEe----------e---------------cCCCCCEEEEeCC-CcCCHHHHHHHHHHHHHH
Confidence 654 232 211 0 0112478999988 656666666666666544
No 271
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.80 E-value=4.5e-18 Score=167.25 Aligned_cols=288 Identities=17% Similarity=0.237 Sum_probs=179.4
Q ss_pred chHHHHHHHHHHHhCC---CeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhc----Cc-----ccC
Q 013210 99 PTVLNLSRQMAALEGT---EAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFF----PR-----ACN 164 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~---~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~----~~-----~~g 164 (447)
+...++.++|.++... +.++|++||++||.+|++... ..+..||.....||+.......+- ++ ...
T Consensus 99 e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~ 178 (447)
T COG0160 99 EPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLP 178 (447)
T ss_pred hhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCC
Confidence 4445677777776543 569999999999999998542 234678888888877533321110 00 011
Q ss_pred eeEEEeCCC-----------------CHHHHHHhhcc-----CCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCE
Q 013210 165 ITTTFVDIS-----------------DHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVT 218 (447)
Q Consensus 165 ~~~~~v~~~-----------------d~~~l~~~i~~-----~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~ 218 (447)
..+..+|.. ..+.++..+.. .++.++++|.++.+.|.+.+ ++++.++|++||++
T Consensus 179 ~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gil 258 (447)
T COG0160 179 PGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGIL 258 (447)
T ss_pred CCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 224444432 12334443322 35889999999999999975 88999999999999
Q ss_pred EEEeCCCCCCCC-----CccCCC--CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHH
Q 013210 219 VVVDNTFSPLVL-----SPARLG--ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFE 291 (447)
Q Consensus 219 livD~~~~~~~~-----~~~~~g--~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~ 291 (447)
+|+||+|+++.. .....| .|+++ ++|.+|+ |..+ |.++.++++.+ ...... ..++.|++++..++.+
T Consensus 259 lI~DEVQtG~GRTG~~fa~E~~gv~PDivt--~aK~ig~-G~Pl-~avv~r~ei~~-~~~g~~-~~Tf~GNpva~Aaa~A 332 (447)
T COG0160 259 LIADEVQTGFGRTGKMFAFEHFGVEPDIVT--LAKSLGG-GLPL-SAVVGRAEIMD-WPPGGH-GGTFGGNPVACAAALA 332 (447)
T ss_pred EEEeccccCCCccccchhhhhcCCCCCEEE--ecccccC-CCce-eEEeccHHhcc-cCCccc-CCCCCcCHHHHHHHHH
Confidence 999999966642 233334 56666 8999997 8988 88999999887 433322 2235666665555555
Q ss_pred HHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--------HHHHH
Q 013210 292 LSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--------EEKAN 363 (447)
Q Consensus 292 ~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--------~~~~~ 363 (447)
.+..++.. ..+++..+.-+++.+.|.++..+ +|.+. +..|.|.++.+++.. .+.+.
T Consensus 333 vL~vie~e-~L~~~a~~~G~~l~~~L~~l~~~--~~~Ig-------------dVRG~Glm~giE~v~d~~t~~p~~~~~~ 396 (447)
T COG0160 333 VLDVIEEE-NLLERAAELGEYLRDRLEELQEK--HPLIG-------------DVRGLGLMIGVELVKDRDTKEPDAELAA 396 (447)
T ss_pred HHHHHHHc-cHHHHHHHHHHHHHHHHHHHHhh--cCcee-------------cccccceEEEEEEecCCCCCCCCHHHHH
Confidence 55433221 23445556666666666654221 11111 234789999999862 24567
Q ss_pred HHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC----CCHHHHHHHHHHHHHH
Q 013210 364 RLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL----GTLDQRWSQFEKALSR 438 (447)
Q Consensus 364 ~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~----~~~~~~i~~l~~al~~ 438 (447)
++++++.. .|++-.+. |...+.|||..- . ++.++.++.|.++|.+
T Consensus 397 ~i~~~~~~---~Glil~~~--------------------------G~~~nviRi~PP-L~is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 397 KIVARAFE---RGLLLLTC--------------------------GPHGNVLRILPP-LTISDEELDEGLDILEEALKE 445 (447)
T ss_pred HHHHHHHH---cCCEEecc--------------------------CCCCcEEEEeCC-cccCHHHHHHHHHHHHHHHHh
Confidence 77777775 34332222 333578888877 5 4445555555555543
No 272
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=1.5e-17 Score=167.25 Aligned_cols=219 Identities=13% Similarity=0.136 Sum_probs=145.3
Q ss_pred CCCchHHHHHHHHHHHhC---CCeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhcC----cccCe-
Q 013210 96 HFNPTVLNLSRQMAALEG---TEAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFP----RACNI- 165 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g---~~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~----~~~g~- 165 (447)
..++...++.++|+++.. .+.++|++||+||+..|++... ....+|+.....||+........-. ...+.
T Consensus 80 ~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~ 159 (421)
T PRK06777 80 VPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFG 159 (421)
T ss_pred cCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCC
Confidence 345666778888888764 3679999999999999998542 2235799999999887544321100 00000
Q ss_pred ----eEEEeCCC----------CHHHHHHhhc----cCCceEEEEEcCCCCCccc-cC---HHHHHHHHHhcCCEEEEeC
Q 013210 166 ----TTTFVDIS----------DHEMVNSAIV----QGRTKVLYFESISNPTLAV-AN---IPELSRLAHDKGVTVVVDN 223 (447)
Q Consensus 166 ----~~~~v~~~----------d~~~l~~~i~----~~~t~lV~i~~~~NptG~v-~~---l~~I~~la~~~gi~livD~ 223 (447)
.+..++.. +++.+++.++ .+++.+|++|.+.++.|.. .| +++|.++|++||+++|+||
T Consensus 160 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 239 (421)
T PRK06777 160 PFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADE 239 (421)
T ss_pred CCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 11222211 2566777763 2468899999999999964 44 8899999999999999999
Q ss_pred CCCCCCCC-----ccCCC--CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC
Q 013210 224 TFSPLVLS-----PARLG--ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI 296 (447)
Q Consensus 224 ~~~~~~~~-----~~~~g--~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~ 296 (447)
+|+++... ...++ .|++ +++|.++ +|.++ |++++++++++.+..... ..+..++.+.+.++...+..+
T Consensus 240 v~tg~gr~g~~~~~~~~~~~pDiv--~~sK~l~-~G~pi-gav~~~~~i~~~~~~~~~-~~T~~~~p~~~aaa~a~L~~~ 314 (421)
T PRK06777 240 VQTGFARTGKLFAMEYYDVKPDLI--TMAKSLG-GGMPI-SAVVGRAEVMDAPAPGGL-GGTYAGNPLAVAAALAVLDVI 314 (421)
T ss_pred hhhCCccCCchhhhhhcCCCCCEE--eeehhhc-CCCce-EEEEEcHHHHhccCCCCC-CCCCCcCHHHHHHHHHHHHHH
Confidence 99665321 11223 5655 6999999 68998 889999988877754332 223445555554554444433
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhC
Q 013210 297 PHLGLRMKEHCHRALIFARRMKKL 320 (447)
Q Consensus 297 ~~l~~~~~~~~~~~~~l~~~L~~~ 320 (447)
+. ....++..++.+++.+.|++.
T Consensus 315 ~~-~~l~~~~~~~g~~l~~~L~~l 337 (421)
T PRK06777 315 AE-EKLCQRALILGAHLVEVLEKA 337 (421)
T ss_pred Hh-ccHHHHHHHHHHHHHHHHHHH
Confidence 22 335566777788888888764
No 273
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.80 E-value=1.1e-17 Score=165.02 Aligned_cols=288 Identities=10% Similarity=0.036 Sum_probs=185.2
Q ss_pred CchHHHHHHHHHHHhCCC---eEEEe-CChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC
Q 013210 98 NPTVLNLSRQMAALEGTE---AAYCT-ASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~---~~~~t-sggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~ 173 (447)
...+++.++.++++++++ .++|+ +|||.++++++.+++.+ +.+++...+|...........+. .+ ++..++.+
T Consensus 40 ~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~-~~-~~~~~~~~ 116 (361)
T TIGR01366 40 KNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPW-LG-EPIIVTAD 116 (361)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhc-cC-CceEEecC
Confidence 456789999999999972 47775 77999999999988743 44556666776555444333332 23 45555544
Q ss_pred CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCC
Q 013210 174 DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGG 251 (447)
Q Consensus 174 d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~ 251 (447)
..+.++..+ .+++++|.+.+..|.||.++|+++| +|++|+++++|.++ +...++..+ +|++++|.+|++|++
T Consensus 117 ~~~~~~~~~-~~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~~--~D~~~~s~~K~lg~~ 190 (361)
T TIGR01366 117 PGSAPEPQA-DPGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIAE--TDVYYFAPQKNFASD 190 (361)
T ss_pred CCCCCCCcc-CCCCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCCCCCHHH--CCEEEEEchhhcCCC
Confidence 333444445 6789999999999999999999988 58899999999998 455556553 899999999999998
Q ss_pred CCeeEEEEEcChHHHHHHHHHhhh------hh-----------hhcCCCccHHHH---HHHHccC---CcHHHHHHHHHH
Q 013210 252 ADIIAGAVCGPANLVNSMMDLHQG------AL-----------MLLGPTMNPKVA---FELSERI---PHLGLRMKEHCH 308 (447)
Q Consensus 252 g~~igG~l~~~~~~~~~l~~~~~~------~~-----------~~~g~~~~~~~a---~~~~~~~---~~l~~~~~~~~~ 308 (447)
+. + ++++.+++.++++.....+ .. ..+.++++.... ..++..+ ..+..+.+++.+
T Consensus 191 ~G-l-~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~ 268 (361)
T TIGR01366 191 GG-L-WLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTAD 268 (361)
T ss_pred Cc-e-EEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 64 3 6667788777665422110 00 011122222211 1122222 125556688889
Q ss_pred HHHHHHHHHHhCCC-eeeCCCCC-CCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCcc
Q 013210 309 RALIFARRMKKLGL-KVLYPGLE-DHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYE 386 (447)
Q Consensus 309 ~~~~l~~~L~~~~~-~v~~p~~~-~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~ 386 (447)
+++++.++|++.+. ++..+... ..+ . +..|.+....+...+...|... | +.+..|..
T Consensus 269 l~~~l~~~l~~~~~~~~~~~~~~~~s~--------------~--v~~v~~~~g~~~~~v~~~L~~~---g-I~i~~~~~- 327 (361)
T TIGR01366 269 SSSRLYSWAQERPYATPFVTDPGKRSQ--------------V--VGTIDFVDDIDAATVAKILRAN---G-IVDTEPYR- 327 (361)
T ss_pred HHHHHHHHHHhCCCcccCCCChhhccc--------------c--eEEEECCCccCHHHHHHHHHHC---C-CeeccCcc-
Confidence 99999999998874 43322110 011 1 2334444333355676777652 3 33322100
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 387 TLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 387 s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
.++ ...+|+|+. ..++.+.++.|.++|+++.
T Consensus 328 --------------------~l~--~~~vRis~~-~~~t~~di~~l~~al~~~~ 358 (361)
T TIGR01366 328 --------------------KLG--RNQLRVAMF-PAIDPDDVEALTECVDWVV 358 (361)
T ss_pred --------------------ccC--CCcEEEEcC-CCCCHHHHHHHHHHHHHHH
Confidence 011 357999999 9999999999999998764
No 274
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.79 E-value=6.5e-17 Score=162.86 Aligned_cols=255 Identities=13% Similarity=0.167 Sum_probs=155.0
Q ss_pred CCCchHHHHHHHHHHHhC---CCeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhc----CcccCe-
Q 013210 96 HFNPTVLNLSRQMAALEG---TEAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFF----PRACNI- 165 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g---~~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~----~~~~g~- 165 (447)
..++...++.++|+++.. .+.++|++||+||+..|++... ....+|+.....||+........- +...+.
T Consensus 73 ~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~ 152 (420)
T TIGR00700 73 TPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFG 152 (420)
T ss_pred cCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCC
Confidence 445666778888888864 2579999999999999997542 223578888988988654332110 000111
Q ss_pred ----eEEEeCCC----------------CHHHHHHhhc----cCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCC
Q 013210 166 ----TTTFVDIS----------------DHEMVNSAIV----QGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGV 217 (447)
Q Consensus 166 ----~~~~v~~~----------------d~~~l~~~i~----~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi 217 (447)
.+..++.. +++.+++.+. .+++.+|++|.++..+|.+.+ +++|.++|++||+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gi 232 (420)
T TIGR00700 153 PFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGI 232 (420)
T ss_pred CCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 12222221 2456666552 357899999999999998876 8899999999999
Q ss_pred EEEEeCCCCCCCCCc-----cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHH
Q 013210 218 TVVVDNTFSPLVLSP-----ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFEL 292 (447)
Q Consensus 218 ~livD~~~~~~~~~~-----~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~ 292 (447)
++|+||+|+++.... ...++...+.+++|.++ +|.++ |++++++++++.+..... ..+..++.+++.++.+.
T Consensus 233 llI~DEV~tg~gr~g~~~a~~~~~~~pDi~~lsK~l~-~G~pi-g~v~~~~~i~~~~~~~~~-~~T~~~~pl~~aaa~a~ 309 (420)
T TIGR00700 233 VFIADEVQTGFARTGAMFACEHEGPEPDLITTAKSLA-DGLPL-SGVTGRAEIMDAPAPGGL-GGTYAGNPLACAAALAV 309 (420)
T ss_pred EEEEEecccCCcccchhHHHhhcCCCCCEEEeecccc-CCcce-EEEEecHHHHhhcCCCCc-CCCCCcCHHHHHHHHHH
Confidence 999999997664321 12233333445999999 78999 999999998887753322 22344454444444343
Q ss_pred HccC--CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-------CHHHHH
Q 013210 293 SERI--PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-------TEEKAN 363 (447)
Q Consensus 293 ~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-------~~~~~~ 363 (447)
+..+ ..+. ++..+..+++.+.|++...+ +|... ...|.|.++++++. ....+.
T Consensus 310 l~~l~~~~~~---~~~~~~g~~l~~~L~~l~~~--~~~~~-------------~vrg~G~~~~i~~~~~~~~~~~~~~~~ 371 (420)
T TIGR00700 310 LAIIESEGLI---ERARQIGRLVTDRLTTLKAV--DPRIG-------------DVRGLGAMIAVELVDPGTTEPDAGLAE 371 (420)
T ss_pred HHHHHhccHH---HHHHHHHHHHHHHHHHHHhh--CCCEE-------------EeeccceEEEEEEecCCCCCccHHHHH
Confidence 3322 2232 33344444455555432110 01100 11156889999883 223345
Q ss_pred HHHHHhhc
Q 013210 364 RLMNYLQN 371 (447)
Q Consensus 364 ~l~~~l~~ 371 (447)
.+...+..
T Consensus 372 ~l~~~~~~ 379 (420)
T TIGR00700 372 RIATAAHA 379 (420)
T ss_pred HHHHHHHH
Confidence 66665554
No 275
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.79 E-value=7.1e-17 Score=163.66 Aligned_cols=281 Identities=17% Similarity=0.134 Sum_probs=168.7
Q ss_pred CCCCchhhHhhhcCCCCCCCCccccccccccccccCCH-HHHHHhhcCCCCC--CCCCccccCCCCchHHHHHH----HH
Q 013210 36 AAWEDPAAALASARHEFGEHGGVNMSIEASATFTVMEP-ETMRRMFAGELGP--DRDFFIYSRHFNPTVLNLSR----QM 108 (447)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~-~~~~~~~~~~~~~--~~~~~~~~r~~~~~~~~l~~----~i 108 (447)
++..||...-+--.....+.. .-.+.+|-+++.+.+ +.+...+..+|+. |.+.|.-|. ..++++|+ +.
T Consensus 15 ~~~~d~~~~~~i~~e~~~q~~--~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~---~~~d~lE~~~~~~~ 89 (475)
T PLN03226 15 LEEVDPEIADIIEKEKRRQWK--GLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGN---EYIDQIETLCQKRA 89 (475)
T ss_pred hhhcCHHHHHHHHHHHHHHHc--CeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCC---hhHHHHHHHHHHHH
Confidence 555677654443322212222 334678888888887 7777777666643 222232222 24444544 46
Q ss_pred HHHhCCCe-EEEe----CChHHHHHHHHHHhcCCCCeEEEeCCCchhHH--HHHHhhcC-cccCee--EEEeCCC-----
Q 013210 109 AALEGTEA-AYCT----ASGMSAISSVLMQLCSSGGHVVAARTLYGGTH--ALLTHFFP-RACNIT--TTFVDIS----- 173 (447)
Q Consensus 109 a~l~g~~~-~~~t----sggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~--~~~~~~~~-~~~g~~--~~~v~~~----- 173 (447)
.++++.+. .+.+ .||+.||..++.+++++||+|+..+..++++. ........ ...+.. +..+..+
T Consensus 90 ~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~ 169 (475)
T PLN03226 90 LEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGL 169 (475)
T ss_pred HHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCC
Confidence 66677654 3323 89999999999999999999998654333222 11111100 001221 1122223
Q ss_pred -CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCC-C----CccCCCCeEEEeCCCc
Q 013210 174 -DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLV-L----SPARLGADVVVHSISK 246 (447)
Q Consensus 174 -d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~-~----~~~~~g~di~~~S~sK 246 (447)
|+++|++.+...++++|++. .++ +|...|+++|.++|+++|+++++|++| .++. . ++.. ++|++++|+||
T Consensus 170 iD~d~Le~~l~~~~pklIv~~-~S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~-~~Div~~t~hK 246 (475)
T PLN03226 170 IDYDKLEKKAMLFRPKLIIAG-ASA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE-YCDVVTTTTHK 246 (475)
T ss_pred cCHHHHHHHHhhcCCeEEEEe-cCc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC-CCeEEEecCcc
Confidence 99999998844567777662 223 678889999999999999999999998 4332 2 2222 69999999999
Q ss_pred cccCCCCeeEEEEEcChHHH-----------H---HHHHHhhhhhhhcCCCccHHHHHH-HHccC--CcHHHHHHHHHHH
Q 013210 247 FISGGADIIAGAVCGPANLV-----------N---SMMDLHQGALMLLGPTMNPKVAFE-LSERI--PHLGLRMKEHCHR 309 (447)
Q Consensus 247 ~~g~~g~~igG~l~~~~~~~-----------~---~l~~~~~~~~~~~g~~~~~~~a~~-~~~~~--~~l~~~~~~~~~~ 309 (447)
++++|. ||+++.+++.+ + .+...+. .....+..+...++.. ++..+ ..+....++..++
T Consensus 247 ~L~GP~---Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~-~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~n 322 (475)
T PLN03226 247 SLRGPR---GGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVF-PGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKAN 322 (475)
T ss_pred cccCCC---ceEEEEchhhcccccCCCccHHHHHHHhccccC-CccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHH
Confidence 995442 47777776543 1 1111111 1112222222222222 22222 2345567888999
Q ss_pred HHHHHHHHHhCCCeeeCCC
Q 013210 310 ALIFARRMKKLGLKVLYPG 328 (447)
Q Consensus 310 ~~~l~~~L~~~~~~v~~p~ 328 (447)
+++|++.|++.|+++..++
T Consensus 323 a~~L~~~L~~~G~~l~~~~ 341 (475)
T PLN03226 323 AAALANRLMSKGYKLVTGG 341 (475)
T ss_pred HHHHHHHHHhCCCEEEcCC
Confidence 9999999999888877654
No 276
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=2.2e-17 Score=166.70 Aligned_cols=253 Identities=17% Similarity=0.202 Sum_probs=156.6
Q ss_pred CchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhcC-----c-ccC--e
Q 013210 98 NPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFP-----R-ACN--I 165 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~-----~-~~g--~ 165 (447)
++...++.++|+++.+. +.++|++||+||+..|++... ....+|+.....||+........-. + ..+ .
T Consensus 83 ~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~ 162 (443)
T PRK08360 83 PVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELS 162 (443)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCC
Confidence 45567788888888754 579999999999999998542 2235788888888876422211100 0 011 1
Q ss_pred eEEEeCCC-----------------CHHHHHHhhc----cCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEE
Q 013210 166 TTTFVDIS-----------------DHEMVNSAIV----QGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVV 220 (447)
Q Consensus 166 ~~~~v~~~-----------------d~~~l~~~i~----~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~li 220 (447)
.+.+++.. +++.+++.++ .+++++|++|..+||+|.+.+ +++|.++|++||+++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI 242 (443)
T PRK08360 163 DVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLV 242 (443)
T ss_pred CcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 12333221 2344555553 257899999999999998875 8899999999999999
Q ss_pred EeCCCCCCCCCc-----c--CCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHH
Q 013210 221 VDNTFSPLVLSP-----A--RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELS 293 (447)
Q Consensus 221 vD~~~~~~~~~~-----~--~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~ 293 (447)
+||+|+++.... . ....|++ +++|.++ +|.++ |++++++++++.+..... ..+..++.+.+.++...+
T Consensus 243 ~DEv~~g~gr~G~~~a~~~~~~~pDii--tlsK~l~-~G~pi-gav~~~~~i~~~~~~~~~-~~T~~~~p~~~aaa~a~l 317 (443)
T PRK08360 243 VDEVQSGLGRTGKWFAIEHFGVEPDII--TLGKPLG-GGLPI-SATIGRAEIMDSLPPLAH-AFTLSGNPVASAAALAVI 317 (443)
T ss_pred EeccccCCCcCccchhhhhcCCCCCEE--Eeccccc-CCcee-EEEEEcHHHHhhhcCCCC-CCCCCcCHHHHHHHHHHH
Confidence 999996553211 1 2234655 5799999 68898 888999998887764322 222334444444444444
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--------HHHHHH
Q 013210 294 ERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--------EKANRL 365 (447)
Q Consensus 294 ~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--------~~~~~l 365 (447)
..++.- ...++..++.+++.+.|++...+ +|... +..|.|.++.++|... ..+..+
T Consensus 318 ~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~--~~~v~-------------~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~ 381 (443)
T PRK08360 318 EEIEEK-NLLKRAEKLGNYTKKRLEEMKKK--HELIG-------------DVRGIGLMIGVDLVKDRETKERAYEEAAKV 381 (443)
T ss_pred HHHHHc-CHHHHHHHHHHHHHHHHHHHHHh--CCCee-------------eeeccceEEEEEEecCCcccCccHHHHHHH
Confidence 433221 23455566666676666543111 11000 1226788999998521 234556
Q ss_pred HHHhhc
Q 013210 366 MNYLQN 371 (447)
Q Consensus 366 ~~~l~~ 371 (447)
...+..
T Consensus 382 ~~~l~~ 387 (443)
T PRK08360 382 VWRAWE 387 (443)
T ss_pred HHHHHH
Confidence 666654
No 277
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.79 E-value=3.8e-19 Score=168.58 Aligned_cols=225 Identities=22% Similarity=0.194 Sum_probs=159.5
Q ss_pred cccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 92 IYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 92 ~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
.|| .++...++++++++++|.+.++|++|||.||..+++.++++++.|++..+.|...++.- ......|.++..++
T Consensus 24 ~Yg--~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~g--a~~~~~G~~~~~l~ 99 (290)
T PF01212_consen 24 AYG--EDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDETG--AIEELSGAKLIPLP 99 (290)
T ss_dssp CTT--SSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSSTT--HHHHHTTCEEEEEB
T ss_pred ccC--CChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeeccc--hhhHhcCcEEEECC
Confidence 355 47889999999999999999999999999999999999999999999998765333221 11012577777765
Q ss_pred CC-----CHHHHHHhhcc-----CCceEEEEEcCCCCC-ccccC---HHHHHHHHHhcCCEEEEeCCC-C----CCCCCc
Q 013210 172 IS-----DHEMVNSAIVQ-----GRTKVLYFESISNPT-LAVAN---IPELSRLAHDKGVTVVVDNTF-S----PLVLSP 232 (447)
Q Consensus 172 ~~-----d~~~l~~~i~~-----~~t~lV~i~~~~Npt-G~v~~---l~~I~~la~~~gi~livD~~~-~----~~~~~~ 232 (447)
.. ++++|++.+.. .++++|++++++|.. |++++ +++|.++||+||+.+|+|.+- . .....+
T Consensus 100 ~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~ 179 (290)
T PF01212_consen 100 SDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSL 179 (290)
T ss_dssp ECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHH
T ss_pred CcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccH
Confidence 43 78999998854 468999999999864 77775 668889999999999999984 1 111122
Q ss_pred cC--CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCcc---HHHH-----HHHHccCCcHHHH
Q 013210 233 AR--LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMN---PKVA-----FELSERIPHLGLR 302 (447)
Q Consensus 233 ~~--~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~---~~~a-----~~~~~~~~~l~~~ 302 (447)
.+ .++|++.+|++|.++.++ |++|++++++++....++. ..|..+. ..++ ...+..++....+
T Consensus 180 ~e~~~~~D~v~~~~tK~~g~~~---Gavl~~~~~~i~~~~~~~k----~~gg~~~~~G~~~a~~~~~~~~l~~l~~~~~~ 252 (290)
T PF01212_consen 180 AEIAAGADSVSFGGTKNGGAPG---GAVLAGNKEFIAKARRQRK----RLGGGMRQAGVLAAAELYQFAALRALELWLER 252 (290)
T ss_dssp HHHHTTSSEEEEETTSTT-SSS---EEEEEESHHHHHHHHHHHH----HHTHHHHHTTHHHHHHHHHHHHHCHEECSHHH
T ss_pred HHHhhhCCEEEEEEEccccccc---ceEEEechHHHHHHHHHHH----HhccCeeecceeeeechhhHHHHHHHHhhHHH
Confidence 22 379999999999999875 6888999998766555444 2222211 1122 1333444444557
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeeCC
Q 013210 303 MKEHCHRALIFARRMKKLGLKVLYP 327 (447)
Q Consensus 303 ~~~~~~~~~~l~~~L~~~~~~v~~p 327 (447)
..+..+++++|.+.|+..+..+..|
T Consensus 253 ~~~~~~~A~~La~~l~~~~~~~~~~ 277 (290)
T PF01212_consen 253 ARHANAMAKRLAAGLEALGGVLPRP 277 (290)
T ss_dssp HHCHHHHHHCHHHCHHEECEEEETT
T ss_pred HHHHHHHHHHHHHHHHHCCCcccCC
Confidence 7778888999999999887765544
No 278
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.79 E-value=8.8e-17 Score=160.16 Aligned_cols=209 Identities=14% Similarity=0.147 Sum_probs=154.9
Q ss_pred hHHHHHHHHHHHhCCC---eEEEeCChH-HHHHHHHHHhcC---CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC
Q 013210 100 TVLNLSRQMAALEGTE---AAYCTASGM-SAISSVLMQLCS---SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 100 ~~~~l~~~ia~l~g~~---~~~~tsggt-~A~~~al~~l~~---~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 172 (447)
..+++++.+++++|.+ .++++++|| .++.+++.++-. +||.||++...|.++...+. ..|.++++++.
T Consensus 106 l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~-----~~G~~pv~Vd~ 180 (444)
T TIGR03531 106 LTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAIS-----TAGFEPRVIET 180 (444)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHH-----HcCCeEEEeee
Confidence 4578999999999987 699999999 688888877642 58999999999998887773 36888888873
Q ss_pred --C------CHHHHHHhhccC---CceEEEEEcCC-CCCccccCHHHHHHHHHhcCCEEEEeCCCCCCC-C------Ccc
Q 013210 173 --S------DHEMVNSAIVQG---RTKVLYFESIS-NPTLAVANIPELSRLAHDKGVTVVVDNTFSPLV-L------SPA 233 (447)
Q Consensus 173 --~------d~~~l~~~i~~~---~t~lV~i~~~~-NptG~v~~l~~I~~la~~~gi~livD~~~~~~~-~------~~~ 233 (447)
+ |+++|+++| ++ ++.++++.+++ .+.|.+.|+++|+++|++||+++|+|++|+... . ...
T Consensus 181 ~~d~~~~~iD~e~Le~aI-t~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~ 259 (444)
T TIGR03531 181 VLDGDELTTDVEDIERAI-EEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAI 259 (444)
T ss_pred eecCcCCCcCHHHHHHHH-HhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhccc
Confidence 1 899999999 44 45666666554 555688899999999999999999999995321 1 122
Q ss_pred CCC-CeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHc--cCCcHHHHHHHHHHH
Q 013210 234 RLG-ADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGALMLLGPTMNPKVAFELSE--RIPHLGLRMKEHCHR 309 (447)
Q Consensus 234 ~~g-~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~--~~~~l~~~~~~~~~~ 309 (447)
..| +|+++.|+||++..+++ ||+++. ++++++.+.....+ .....+ .+.++..+. +.+.+.+.+++..++
T Consensus 260 ~~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~y~g---~~~~s~-~~~~~~~ll~~G~~g~~~li~~~~~~ 333 (444)
T TIGR03531 260 KVGRVDAVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKSYPG---RASASP-SLDVLITLLSLGSKGYLELLKERKEM 333 (444)
T ss_pred cccCCCeEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHhccC---CCCChH-HHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 344 69999999999998775 577755 77888777654331 111222 233333332 446677888888999
Q ss_pred HHHHHHHHHhC
Q 013210 310 ALIFARRMKKL 320 (447)
Q Consensus 310 ~~~l~~~L~~~ 320 (447)
++++.+.|++.
T Consensus 334 a~~l~~~L~~l 344 (444)
T TIGR03531 334 YKYLKELLQKL 344 (444)
T ss_pred HHHHHHHHHHH
Confidence 99999998765
No 279
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.79 E-value=1.6e-16 Score=141.93 Aligned_cols=219 Identities=20% Similarity=0.274 Sum_probs=170.4
Q ss_pred CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC---
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 173 (447)
..|.+..+-+.+|+++|.+.+-+|+|+.+|-.+++.+++++||-|++....|..++-... + .|.++..||..
T Consensus 59 ~kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAE----r-agl~v~eVp~tg~P 133 (382)
T COG1103 59 TKPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAE----R-AGLNVAEVPNTGYP 133 (382)
T ss_pred cCCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHH----h-cCCeEEecCCCCCC
Confidence 346778888889999999999999999999999999999999999999999887776653 3 68888888754
Q ss_pred ----CHHHHHHhhc---c---CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEE
Q 013210 174 ----DHEMVNSAIV---Q---GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVV 241 (447)
Q Consensus 174 ----d~~~l~~~i~---~---~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~ 241 (447)
+++...+.|+ + ..+.+..+.++....|.+.|.++++++|+++|++++...+| +.++.+..+.|+|+++
T Consensus 134 ey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiV 213 (382)
T COG1103 134 EYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIV 213 (382)
T ss_pred ceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEE
Confidence 5555444441 1 34788899999999999999999999999999999999999 6678888899999999
Q ss_pred eCCCccccCCCCeeEEEEEcChHHHHHHHHHhh-----hhhhhcCCCccHHHHHHHHccCCcHHHHHHHH---HHHHHHH
Q 013210 242 HSISKFISGGADIIAGAVCGPANLVNSMMDLHQ-----GALMLLGPTMNPKVAFELSERIPHLGLRMKEH---CHRALIF 313 (447)
Q Consensus 242 ~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~-----~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~---~~~~~~l 313 (447)
+|.||+++..+ ++ |++..+.++.+.+.+... .-....|.+.-......++....+..+|+++. -+.++++
T Consensus 214 gSGHKsmAAs~-Pi-Gvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~f 291 (382)
T COG1103 214 GSGHKSMAASA-PI-GVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWF 291 (382)
T ss_pred ecCccchhccC-Ce-eEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999666 46 999999998877644321 01113344432222333444667777777665 5677889
Q ss_pred HHHHHhCCC
Q 013210 314 ARRMKKLGL 322 (447)
Q Consensus 314 ~~~L~~~~~ 322 (447)
.+.|.+++.
T Consensus 292 v~elEkigg 300 (382)
T COG1103 292 VAELEKIGG 300 (382)
T ss_pred HHHHHHhhh
Confidence 999988863
No 280
>PLN02271 serine hydroxymethyltransferase
Probab=99.78 E-value=2e-16 Score=158.39 Aligned_cols=286 Identities=16% Similarity=0.180 Sum_probs=183.1
Q ss_pred cccccccccccCCH-HHHHHhhcCCCC--CCCCCccccCCCCchHHH-HHHHHHHHhCCCe----E-EEeCChHHHHHHH
Q 013210 60 MSIEASATFTVMEP-ETMRRMFAGELG--PDRDFFIYSRHFNPTVLN-LSRQMAALEGTEA----A-YCTASGMSAISSV 130 (447)
Q Consensus 60 ~pi~~att~~~~~~-~~~~~~~~~~~~--~~~~~~~~~r~~~~~~~~-l~~~ia~l~g~~~----~-~~tsggt~A~~~a 130 (447)
-.+.+|-+++.+.+ +.+-..+.++|. -|..-|+-|-..-..++. +.++..+++|++. + +---||+.||.++
T Consensus 151 l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV 230 (586)
T PLN02271 151 IELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAV 230 (586)
T ss_pred eeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHH
Confidence 35677888887776 555556666553 222222222211122333 3345556788654 2 2233999999999
Q ss_pred HHHhcCCCCeEEEeCCCchhHHHHHH-----hhcCcccCeeEEEe--CCC------CHHHHHHhhccCCceEEEEEcCCC
Q 013210 131 LMQLCSSGGHVVAARTLYGGTHALLT-----HFFPRACNITTTFV--DIS------DHEMVNSAIVQGRTKVLYFESISN 197 (447)
Q Consensus 131 l~~l~~~gd~Vi~~~~~y~~~~~~~~-----~~~~~~~g~~~~~v--~~~------d~~~l~~~i~~~~t~lV~i~~~~N 197 (447)
+.++++|||+|+..+..|++...... ..... .|..+..+ +.+ |.+++++.....++++|++....+
T Consensus 231 ~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~-sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Say 309 (586)
T PLN02271 231 YTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSG-ASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSY 309 (586)
T ss_pred HHHhcCCCCEEEEecCCCCCchhccccccccccccc-ccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhc
Confidence 99999999999999999988765431 00111 35433333 232 899999844378999999988788
Q ss_pred CCccccCHHHHHHHHHhcCCEEEEeCCC-CCCC-C----CccCCCCeEEEeCCCccccCCCCeeEEEEEcChH-------
Q 013210 198 PTLAVANIPELSRLAHDKGVTVVVDNTF-SPLV-L----SPARLGADVVVHSISKFISGGADIIAGAVCGPAN------- 264 (447)
Q Consensus 198 ptG~v~~l~~I~~la~~~gi~livD~~~-~~~~-~----~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~------- 264 (447)
| ...|+++|.++|+++|+++++|.+| .++. . +|.. ++|++++|.||++.||- ||+++.+++
T Consensus 310 p--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~-~aDvvt~TTHKtLrGPr---GG~I~~r~~~~~~~~g 383 (586)
T PLN02271 310 P--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFD-YCDIVTSTTHKSLRGPR---GGIIFYRKGPKLRKQG 383 (586)
T ss_pred c--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCc-CCcEEEeCCcccCCCCC---ceEEEecccccccccC
Confidence 7 7789999999999999999999999 4443 1 3433 59999999999997663 466655542
Q ss_pred -------------HHHHHHHHhhhhhhhcCCCccHHHHHHH-Hc--cCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 013210 265 -------------LVNSMMDLHQGALMLLGPTMNPKVAFEL-SE--RIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPG 328 (447)
Q Consensus 265 -------------~~~~l~~~~~~~~~~~g~~~~~~~a~~~-~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~ 328 (447)
+.+++...... ....|+.+...++.++ +. ....+.+..++..+|++.|++.|.+.|+++..-+
T Consensus 384 ~~gs~s~~~~~~d~~~kI~~aVfP-glqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~G~~vv~gg 462 (586)
T PLN02271 384 MLLSHGDDNSHYDFEEKINFAVFP-SLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTGG 462 (586)
T ss_pred CccccccccccHHHHHHhhcccCC-ccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCCCeEeeCC
Confidence 33444332211 1233333444333332 22 2234567888899999999999999999877544
Q ss_pred CCCCchhHHHHHHhccCCCcCcEEEEEeC----CHHHHHHHHHHhhc
Q 013210 329 LEDHPHHELLKSMANKEYGFGGLLCLDME----TEEKANRLMNYLQN 371 (447)
Q Consensus 329 ~~~~p~~~l~~~~~~~~~g~g~~~~~~l~----~~~~~~~l~~~l~~ 371 (447)
... | ++.+.+. +...+++.++...+
T Consensus 463 Tdn---H---------------lvLvDl~~~g~~G~~ae~~Le~~~I 491 (586)
T PLN02271 463 TDN---H---------------LLLWDLTTLGLTGKNYEKVCEMCHI 491 (586)
T ss_pred CCc---c---------------eeeecCcccCCCHHHHHHHHHHcCe
Confidence 221 1 6677764 24456666665553
No 281
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.78 E-value=2.7e-17 Score=164.90 Aligned_cols=293 Identities=13% Similarity=0.124 Sum_probs=178.4
Q ss_pred CCchHHHHHHHHHHHh--C--C-CeEEE-eCChHHHHHHHHHHhcC-C-CCeEEEeCCCchhHHHHHHhhc-----Cccc
Q 013210 97 FNPTVLNLSRQMAALE--G--T-EAAYC-TASGMSAISSVLMQLCS-S-GGHVVAARTLYGGTHALLTHFF-----PRAC 163 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~--g--~-~~~~~-tsggt~A~~~al~~l~~-~-gd~Vi~~~~~y~~~~~~~~~~~-----~~~~ 163 (447)
.++...++.++|+++. + . ..++| ++||+||+..|++.... + .++|+.....||+......... ....
T Consensus 76 ~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~ 155 (412)
T TIGR02407 76 ATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGA 155 (412)
T ss_pred CcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCC
Confidence 3555667888888763 1 2 24666 48999999999986532 2 3579999999988754432110 1101
Q ss_pred C---eeEEEeCC--------CCHHHHHHhhcc-----CCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeC
Q 013210 164 N---ITTTFVDI--------SDHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDN 223 (447)
Q Consensus 164 g---~~~~~v~~--------~d~~~l~~~i~~-----~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~ 223 (447)
+ ..+.+++. ++++.+++.+.+ +++.+|++|.+.++.|.+.+ +++|.++|++||+++|+||
T Consensus 156 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 235 (412)
T TIGR02407 156 GVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDD 235 (412)
T ss_pred CCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1 12344443 246778877732 45789999999999998643 8899999999999999999
Q ss_pred CCCCCC-------CCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHcc-
Q 013210 224 TFSPLV-------LSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER- 295 (447)
Q Consensus 224 ~~~~~~-------~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~- 295 (447)
+|+++. +....+..|+++ ++|.+++.|.++ |+++.++++ +.+..... ..+..|+.++..++.+.+..
T Consensus 236 V~tG~GRtG~~~a~~~~~v~PDi~~--~~K~lg~~G~pi-gav~~~~~~-~~~~~~~~-~~T~~gnpl~~aaa~a~l~~~ 310 (412)
T TIGR02407 236 IQAGCGRTGTFFSFEPAGIEPDIVC--LSKSISGYGLPL-ALTLIKPEL-DVWKPGEH-NGTFRGNNLAFVTATAALEYY 310 (412)
T ss_pred hhhCCCccchhHHhcccCCCCCEEE--echhccCCccce-eEEEEchhh-hccCCCcc-CCCCCccHHHHHHHHHHHHHH
Confidence 996552 222334567665 789999658888 888887775 44322111 12233333333333333332
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccc
Q 013210 296 IPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQF 375 (447)
Q Consensus 296 ~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~ 375 (447)
++. ....++..+..+++.+.|+..... +|.... ...|.|.+++++++.......+...+.. .
T Consensus 311 i~~-~~l~~~~~~~g~~l~~~l~~l~~~--~~~~~~------------~vrg~Gl~~~l~l~~~~~~~~~~~~~~~---~ 372 (412)
T TIGR02407 311 WSD-DAFEKAVQRKSEIIQERLDRIVAE--YPELIK------------QVRGRGLMQGIECGDGDLAGKIAKAAFE---N 372 (412)
T ss_pred hcc-cHHHHHHHHHHHHHHHHHHHHHhh--CCCceE------------eeecceeEEEEEecChHHHHHHHHHHHH---C
Confidence 222 223344555556666666542100 010000 1125788999999876556677777765 2
Q ss_pred ccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 376 GFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 376 g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
|+ .+... +...+.|||++. ...+++.++.+.++|++.
T Consensus 373 Gv-~v~~~-------------------------~~~~~~lr~~p~-l~~t~~~i~~~~~~l~~~ 409 (412)
T TIGR02407 373 GL-IIETS-------------------------GPNDEVIKLLPP-LTIDEETLQQGLDILEQA 409 (412)
T ss_pred CC-EEecc-------------------------CCCCCEEEEECC-CCCCHHHHHHHHHHHHHH
Confidence 32 22111 112367999999 877777777777777654
No 282
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.78 E-value=1.6e-16 Score=160.42 Aligned_cols=289 Identities=12% Similarity=0.149 Sum_probs=174.1
Q ss_pred CchHHHHHHHHHHHhCC---CeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhcCc----ccC----
Q 013210 98 NPTVLNLSRQMAALEGT---EAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPR----ACN---- 164 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~---~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~----~~g---- 164 (447)
++...++.+.++++.+. +.++|++||++|+..+++... ....+|+...+.||+....+...... ..|
T Consensus 83 ~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~ 162 (425)
T PRK08088 83 YEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLM 162 (425)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCC
Confidence 45556788888887653 579999999999999987542 23457888899998876544221110 011
Q ss_pred ---eeEEEeCC--C------CHHHHHHhhc----cCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCC
Q 013210 165 ---ITTTFVDI--S------DHEMVNSAIV----QGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 165 ---~~~~~v~~--~------d~~~l~~~i~----~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~ 225 (447)
+....++. . ++++|+++++ .++.++|++|.+.+..|.+.+ +++|.++|++||+++|+||+|
T Consensus 163 ~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~ 242 (425)
T PRK08088 163 PGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQ 242 (425)
T ss_pred CCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 11111111 1 1556888773 256889999998877777765 889999999999999999999
Q ss_pred CCCCCCc-----cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHH
Q 013210 226 SPLVLSP-----ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLG 300 (447)
Q Consensus 226 ~~~~~~~-----~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~ 300 (447)
+++.... ...+.+..+.|++|.++ +|.|+ ||+++++++++.+..... ..+..++.+.+.++...+..... .
T Consensus 243 ~g~g~~g~~~~~~~~~~~pdi~s~sK~l~-~G~ri-g~v~~~~~~~~~~~~~~~-~~t~~~~~~~~~a~~~~l~~~~~-~ 318 (425)
T PRK08088 243 TGAGRTGTLFAMEQMGVAADLTTFAKSIA-GGFPL-AGVTGRAEVMDAIAPGGL-GGTYAGNPIACAAALAVLKVFEQ-E 318 (425)
T ss_pred cCCCcCcchhHHhhcCCCCCEEEEecccc-CCCcc-eeeEecHHHHhhcCCCCC-CCCCCcCHHHHHHHHHHHHHHHh-c
Confidence 6553221 12345555788999999 68998 999999999888764332 22233444444444444432211 1
Q ss_pred HHHHHHHHHHHHHHHHHH----hCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC--------CHHHHHHHHHH
Q 013210 301 LRMKEHCHRALIFARRMK----KLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME--------TEEKANRLMNY 368 (447)
Q Consensus 301 ~~~~~~~~~~~~l~~~L~----~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~--------~~~~~~~l~~~ 368 (447)
...++.++..+++.+.|+ ..+. +.. ..|.|.++|+.+. +......+...
T Consensus 319 ~~~~~~~~~~~~~~~~l~~l~~~~~~-~~~------------------v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~ 379 (425)
T PRK08088 319 NLLQKANALGEKLKDGLLAIAEKHPE-IGD------------------VRGLGAMIAIELFEDGDHSKPNAKLTAQIVAR 379 (425)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCC-eEE------------------EeccceEEEEEEecCCCCCCCCHHHHHHHHHH
Confidence 122233333333333333 2332 110 1146889999993 23345667766
Q ss_pred hhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 369 LQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 369 l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+.. .|++..+.+ ...+.|||+++ ...+++.|+...+.|.+.
T Consensus 380 ~~~---~Gv~~~~~~--------------------------~~~~~iRl~~~-~~~t~~ei~~~i~~l~~~ 420 (425)
T PRK08088 380 ARD---KGLILLSCG--------------------------PYYNVLRILVP-LTIEDAQIRQGLEIIAQC 420 (425)
T ss_pred HHh---CCCEEecCC--------------------------CCCCEEEEECC-CCcCHHHHHHHHHHHHHH
Confidence 664 232211101 11367999999 655566666555555544
No 283
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.77 E-value=1.1e-16 Score=161.40 Aligned_cols=256 Identities=15% Similarity=0.127 Sum_probs=156.3
Q ss_pred CCchHHHHHHHHHHHh----CCC-eEEE-eCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhh-----cCccc
Q 013210 97 FNPTVLNLSRQMAALE----GTE-AAYC-TASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHF-----FPRAC 163 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~----g~~-~~~~-tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~-----~~~~~ 163 (447)
.++...++.++++++. +.+ .++| ++||+||+..|++... ....+||.....||+........ .....
T Consensus 80 ~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~ 159 (425)
T PRK09264 80 HTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGA 159 (425)
T ss_pred CcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCC
Confidence 3555667888888764 233 4666 4899999999998643 22357899898888865332111 00001
Q ss_pred C---eeEEEeCC--------CCHHHHHHhhcc-----CCceEEEEEcCCCCCcccc----CHHHHHHHHHhcCCEEEEeC
Q 013210 164 N---ITTTFVDI--------SDHEMVNSAIVQ-----GRTKVLYFESISNPTLAVA----NIPELSRLAHDKGVTVVVDN 223 (447)
Q Consensus 164 g---~~~~~v~~--------~d~~~l~~~i~~-----~~t~lV~i~~~~NptG~v~----~l~~I~~la~~~gi~livD~ 223 (447)
+ ..+.+++. +|++++++.+++ +++.+|++|.+.+..|.+. .+++|.++|++||+++|+||
T Consensus 160 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 239 (425)
T PRK09264 160 GVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDD 239 (425)
T ss_pred CCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEec
Confidence 1 12444444 367788887732 3578999999999888765 38999999999999999999
Q ss_pred CCCCCCC-------CccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC
Q 013210 224 TFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI 296 (447)
Q Consensus 224 ~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~ 296 (447)
+|+++.. .......|++ +++|.+++.|.++ |+++.++++ ..+..... ..+..++.++..++...+..+
T Consensus 240 V~tG~GrtG~~~~~~~~~v~PDi~--t~~K~l~~~G~pi-gav~~~~~i-~~~~~~~~-~~T~~gnp~~~aaa~a~l~~~ 314 (425)
T PRK09264 240 IQAGCGRTGTFFSFERAGITPDIV--TLSKSISGYGLPM-ALVLIKPEL-DVWKPGEH-NGTFRGNNLAFVTATAALEEY 314 (425)
T ss_pred hhhCCccccHHHHHhhcCCCCCEE--EeccccCCCccce-EEEEEchhh-hccCCCcc-CCCCCCCHHHHHHHHHHHHHH
Confidence 9965521 1122345665 5789999768888 888887776 33322111 122334443433333333211
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 297 PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 297 ~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
-.-....++.+++.+++.+.|++...+ +|.... +..|.|.++++.+++.+....+...+..
T Consensus 315 ~~~~~l~~~~~~~g~~l~~~l~~l~~~--~~~~~~------------~vrg~Gl~~~i~l~~~~~~~~l~~~~~~ 375 (425)
T PRK09264 315 WSDDAFEKEVKAKGELVRERLEEIAAK--YPGLGA------------EVRGRGMMQGIDFGDGELAGKIAAEAFE 375 (425)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHh--CCCcee------------cceecccEEEEEecChHHHHHHHHHHHH
Confidence 111124455666777777777653111 111000 1125788999999866556677777765
No 284
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.77 E-value=1.5e-16 Score=156.36 Aligned_cols=300 Identities=17% Similarity=0.137 Sum_probs=184.8
Q ss_pred CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHH-HHhhcCcccCeeEEEeCC---
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHAL-LTHFFPRACNITTTFVDI--- 172 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~-~~~~~~~~~g~~~~~v~~--- 172 (447)
++++..++|+.+++++|.+.+++|+||+.|++++....+++||.| +.+.|..+... +. ..|..+.-++.
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe-----~~Gav~vDi~~dea 141 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQE-----KNGATFVDIIIDEA 141 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHH-----hCCeEEEeeecccc
Confidence 567889999999999999999999999999888766668999976 55666444433 31 14543333311
Q ss_pred ------------CCHHHHHHhhccC---CceEEEEEcCCCCC-cccc---CHHHHHHHHHhcCCEEEEeCCC-C-C--CC
Q 013210 173 ------------SDHEMVNSAIVQG---RTKVLYFESISNPT-LAVA---NIPELSRLAHDKGVTVVVDNTF-S-P--LV 229 (447)
Q Consensus 173 ------------~d~~~l~~~i~~~---~t~lV~i~~~~Npt-G~v~---~l~~I~~la~~~gi~livD~~~-~-~--~~ 229 (447)
.|+++|+++|... ++++|.+++++|-. |.+. ++++|.++|++||+.+|.|.++ . . +.
T Consensus 142 ~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I 221 (450)
T TIGR02618 142 HDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFI 221 (450)
T ss_pred cccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhh
Confidence 1899999999321 45688888888865 7884 5789999999999999999997 2 1 11
Q ss_pred ------C---Ccc----C--CCCeEEEeCCCccccCCCCeeEEEEE-cChHHHHHHHHHhh--hhhhhcCCCccHHHHHH
Q 013210 230 ------L---SPA----R--LGADVVVHSISKFISGGADIIAGAVC-GPANLVNSMMDLHQ--GALMLLGPTMNPKVAFE 291 (447)
Q Consensus 230 ------~---~~~----~--~g~di~~~S~sK~~g~~g~~igG~l~-~~~~~~~~l~~~~~--~~~~~~g~~~~~~~a~~ 291 (447)
+ ++. + -.+|.++.|++|..+.+ +||+++ .+++++++++..+. ++....| .++.....+
T Consensus 222 ~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~---~GG~l~~~d~~l~~k~r~~~~~~eG~~tyG-gla~r~~~a 297 (450)
T TIGR02618 222 KEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVN---IGGFLCMNDDEMFQSAKELVVVFEGMPSYG-GLAGRDMEA 297 (450)
T ss_pred hcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCC---CceEEEeCCHHHHHHHHHHhhhcCCccccC-chhhhhHHH
Confidence 1 110 1 15899999999999976 579887 78889988887643 1111122 222222111
Q ss_pred HHccCCc-HH-HHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--------HHH
Q 013210 292 LSERIPH-LG-LRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--------EEK 361 (447)
Q Consensus 292 ~~~~~~~-l~-~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--------~~~ 361 (447)
+..++.+ +. ...++...+.++|.+.|.+.|..+..|. .|..+.++... .--
T Consensus 298 la~gL~e~~~~~y~~~r~~~a~~La~~L~~~Gvpv~~p~-------------------ggh~V~vda~~~lph~~~~~~p 358 (450)
T TIGR02618 298 MAIGIREAVDYEYIEHRVKQVRYLGDKLKAAGVPIVEPV-------------------GGHAVFLDARRFLPHIPQDQFP 358 (450)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHCCCcccCCC-------------------CcceEEEEhHHhCCCCChhhCh
Confidence 1122222 11 2233345568899999999888775553 34456565421 112
Q ss_pred HHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 362 ANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 362 ~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+..+...|-. .-|+-++-.|+.-.- .-|. ++ +.. .-.-.++|+.+-.+-=+.+.++-+.+++..+
T Consensus 359 ~~al~~~ly~--~~gir~~e~g~~~~~-~~~~--~~-----~~~---~~~~el~rlaiprr~yt~~h~~~v~~~~~~~ 423 (450)
T TIGR02618 359 AQSLAASIYV--ETGVRSMERGIVSAG-RNNV--TG-----EHH---RPKLELVRLTIPRRVYTYAHMDVVADGIIKL 423 (450)
T ss_pred HHHHHHHHHH--HhCccEEeecceecc-cCCC--CC-----ccc---CCccceeeeccccccccHhHHHHHHHHHHHH
Confidence 4566666654 235556666632100 0011 10 000 0012679999982233455555555555554
No 285
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.77 E-value=4.2e-17 Score=163.90 Aligned_cols=298 Identities=13% Similarity=0.132 Sum_probs=179.9
Q ss_pred CCCCchHHHHHHHHHHHhCC---CeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhc----CcccC-
Q 013210 95 RHFNPTVLNLSRQMAALEGT---EAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFF----PRACN- 164 (447)
Q Consensus 95 r~~~~~~~~l~~~ia~l~g~---~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~----~~~~g- 164 (447)
...++...++.++|+++.+. +.++|++||+||+..|++... ....+|+.....||+......... ....+
T Consensus 79 ~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~ 158 (425)
T PRK07495 79 VVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGF 158 (425)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCC
Confidence 34566667788888888752 579999999999999998542 224579999999988643221110 00011
Q ss_pred ----eeEEEeCCCC----------HHHHHHhhc----cCCceEEEEEcCCCCCcccc-C---HHHHHHHHHhcCCEEEEe
Q 013210 165 ----ITTTFVDISD----------HEMVNSAIV----QGRTKVLYFESISNPTLAVA-N---IPELSRLAHDKGVTVVVD 222 (447)
Q Consensus 165 ----~~~~~v~~~d----------~~~l~~~i~----~~~t~lV~i~~~~NptG~v~-~---l~~I~~la~~~gi~livD 222 (447)
..+.+++..+ ++++++.++ .+++++|++|.+...+|.+. | +++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~D 238 (425)
T PRK07495 159 GAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIAD 238 (425)
T ss_pred CCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 1233344322 455666652 24689999999888788654 3 889999999999999999
Q ss_pred CCCCCCCCC-----ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCC
Q 013210 223 NTFSPLVLS-----PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP 297 (447)
Q Consensus 223 ~~~~~~~~~-----~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~ 297 (447)
|+|+++... ....++...+.+++|.++ .|.++ |++++++++++.+..... ..+..++.+...++.+.+..++
T Consensus 239 Ev~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~-~G~pi-gav~~~~~i~~~~~~~~~-~~T~~~~pl~~aaa~a~l~~l~ 315 (425)
T PRK07495 239 EVQTGFARTGKLFAMEHHEVAADLTTMAKGLA-GGFPL-AAVTGRAEIMDAPGPGGL-GGTYGGNPLGIAAAHAVLDVIE 315 (425)
T ss_pred chhhcCCcCCCceeecccCCCCCEEeehhhhc-CCccc-eEEEEcHHHHhccCCCCc-CCCCCCCHHHHHHHHHHHHHHH
Confidence 999655322 122345455667999999 57888 889999998877653222 2223444444443334433332
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-------HHHHHHHHHhh
Q 013210 298 HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-------EKANRLMNYLQ 370 (447)
Q Consensus 298 ~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-------~~~~~l~~~l~ 370 (447)
. ....++.+++.++|.+.|++...+ +|... +..|.|.++++++... ..+..+...+.
T Consensus 316 ~-~~l~~~~~~~g~~l~~~L~~l~~~--~~~i~-------------~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~ 379 (425)
T PRK07495 316 E-EDLCERANQLGNRLKQRLASLRET--VPEIA-------------DIRGPGFMNAVEFNDADSGLPSAEFANRVRLKAL 379 (425)
T ss_pred h-chHHHHHHHHHHHHHHHHHHHHhh--CCCee-------------eeecCceEEEEEEecCCCCCccHHHHHHHHHHHH
Confidence 1 123455566667777777653111 11110 1226788999999531 12345555555
Q ss_pred cccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCC---CCCHHHHHHHHHHHHHHhh
Q 013210 371 NYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGY---LGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 371 ~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~---~~~~~~~i~~l~~al~~~~ 440 (447)
. .|++....| ...+.|||...+ .+++++.++.|.++|++++
T Consensus 380 ~---~Gvl~~~~g--------------------------~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 380 E---KGLILLTCG--------------------------VHGNVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred H---CCeEEeecC--------------------------CCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 4 233211111 113568888661 3556666677777776654
No 286
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.77 E-value=1.2e-16 Score=161.56 Aligned_cols=255 Identities=13% Similarity=0.173 Sum_probs=156.5
Q ss_pred CCCchHHHHHHHHHHHhCC---CeEEEeCChHHHHHHHHHHhc-CC-CCeEEEeCCCchhHHHHHHhhcC------ccc-
Q 013210 96 HFNPTVLNLSRQMAALEGT---EAAYCTASGMSAISSVLMQLC-SS-GGHVVAARTLYGGTHALLTHFFP------RAC- 163 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g~---~~~~~tsggt~A~~~al~~l~-~~-gd~Vi~~~~~y~~~~~~~~~~~~------~~~- 163 (447)
..++...++.++|+++... +.++|++||+||+..|++... -. ..+|+.....||+........-. ...
T Consensus 82 ~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~ 161 (445)
T PRK08593 82 MYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYG 161 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCC
Confidence 3467778899999998742 479999999999999998542 12 35788888888886532211100 000
Q ss_pred --CeeEEEeCCCC-----------------HHHHHHhhc----cCCceEEEEEcCCCCCccccC----HHHHHHHHHhcC
Q 013210 164 --NITTTFVDISD-----------------HEMVNSAIV----QGRTKVLYFESISNPTLAVAN----IPELSRLAHDKG 216 (447)
Q Consensus 164 --g~~~~~v~~~d-----------------~~~l~~~i~----~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~g 216 (447)
...+.+++..+ ++++++.+. .+++.+|++|.+.+..|.+.| +++|.++|++||
T Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g 241 (445)
T PRK08593 162 PLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHG 241 (445)
T ss_pred CCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 01123333211 134444442 257899999999999998876 999999999999
Q ss_pred CEEEEeCCCCCCCCC-----ccCCC--CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHH
Q 013210 217 VTVVVDNTFSPLVLS-----PARLG--ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVA 289 (447)
Q Consensus 217 i~livD~~~~~~~~~-----~~~~g--~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a 289 (447)
+++|+||+++++... ...++ .|++ +++|.+++ |.++ |++++++++++.+..... ..+..+++....++
T Consensus 242 ~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~--t~gK~l~~-G~p~-gav~~~~~i~~~~~~~~~-~~T~~~~pl~~aaa 316 (445)
T PRK08593 242 ILFAVDDIQQGLGRTGKWSSISHFNITPDLM--SFGKSLAG-GMPM-SAIVGRKEIMESLEAPAH-LFTTGANPVSCAAA 316 (445)
T ss_pred CEEEEechhhCCCcCchHHHHHhcCCCCCEe--eecccccC-Cccc-EEEEEcHHHHhhhccCCC-CCCCCCCHHHHHHH
Confidence 999999999655321 11223 4555 58999984 6777 888999999887753222 22233444443334
Q ss_pred HHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--------HHH
Q 013210 290 FELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--------EEK 361 (447)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--------~~~ 361 (447)
...+..++. ....++..++.++|.+.|+++..+. |... +..|.|.++.+++.. ...
T Consensus 317 ~a~l~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~--~~v~-------------~vrG~Gl~~gi~l~~~~~~~~~~~~~ 380 (445)
T PRK08593 317 LATIDMIED-ESLLQRSAEKGEYARKRFDQWVSKY--NFVG-------------DVRGYGLSIGIDIVSDKKLKTRDNEA 380 (445)
T ss_pred HHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcC--CcEE-------------EEeccceEEEEEEecCCCcCCCcHHH
Confidence 444433322 1244556666667777776531111 1000 123678898888852 123
Q ss_pred HHHHHHHhhc
Q 013210 362 ANRLMNYLQN 371 (447)
Q Consensus 362 ~~~l~~~l~~ 371 (447)
+..+...+..
T Consensus 381 ~~~~~~~~~~ 390 (445)
T PRK08593 381 ALKICNYCFE 390 (445)
T ss_pred HHHHHHHHHH
Confidence 4556666654
No 287
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.77 E-value=4.4e-17 Score=166.36 Aligned_cols=241 Identities=13% Similarity=0.154 Sum_probs=150.2
Q ss_pred CCchHHHHHHHHHHHhC-C--CeEEEeCChHHHHHHHHHHhc------C-CC-CeEEEeCCCchhHHHHHHhhcC-----
Q 013210 97 FNPTVLNLSRQMAALEG-T--EAAYCTASGMSAISSVLMQLC------S-SG-GHVVAARTLYGGTHALLTHFFP----- 160 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g-~--~~~~~tsggt~A~~~al~~l~------~-~g-d~Vi~~~~~y~~~~~~~~~~~~----- 160 (447)
.++...++.++|.+++. . +.++|++||++|+..|++... . ++ ++||.....||+........-.
T Consensus 131 ~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~ 210 (504)
T PLN02760 131 TTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALH 210 (504)
T ss_pred CcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhc
Confidence 45556788888888753 3 469999999999999998653 1 22 5788888888876422211000
Q ss_pred cccCe---eEEEeCCC----------C--------HHHHHHhhc---cCCceEEEEEcCCCCCccccC----HHHHHHHH
Q 013210 161 RACNI---TTTFVDIS----------D--------HEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPELSRLA 212 (447)
Q Consensus 161 ~~~g~---~~~~v~~~----------d--------~~~l~~~i~---~~~t~lV~i~~~~NptG~v~~----l~~I~~la 212 (447)
...+. .+..++.. + .++|++.+. .+++.+|++|.+....|.+.| +++|.++|
T Consensus 211 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc 290 (504)
T PLN02760 211 QKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVL 290 (504)
T ss_pred cCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHH
Confidence 00110 12222211 1 234666552 246889999999999999987 99999999
Q ss_pred HhcCCEEEEeCCCCCCCC-----CccCCC--CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHh------hhhhhh
Q 013210 213 HDKGVTVVVDNTFSPLVL-----SPARLG--ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH------QGALML 279 (447)
Q Consensus 213 ~~~gi~livD~~~~~~~~-----~~~~~g--~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~------~~~~~~ 279 (447)
++||+++|+||+++++.. ....+| .|+++ ++|.+|+...++ |++++++++++.+.... ....+.
T Consensus 291 ~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivt--lgK~lggG~~Pi-gAv~~~~~i~d~~~~~~~~~~~~~h~~T~ 367 (504)
T PLN02760 291 KKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVS--LAKALSSAYMPI-GAVLVSPEISDVIHSQSNKLGSFAHGFTY 367 (504)
T ss_pred HHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEE--ecccccCCcccc-ceEeecHHHHhhhhcccccccCcccCCCC
Confidence 999999999999966621 111223 56544 899998543467 66888889888775310 112234
Q ss_pred cCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 280 LGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 280 ~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
.|++++..++.+.+..++. ....++.+++.++|.+.|++. .+ +|-.. +..|.|.++.+++.
T Consensus 368 ~gnPl~~Aaala~Le~i~~-~~l~~~~~~~g~~l~~~L~~l-~~--~~~v~-------------~vrG~Gl~~gie~~ 428 (504)
T PLN02760 368 SGHPVSCAVALEALKIYKE-RNIPEHVNKIAPRFQDGIKAF-SG--SPIIG-------------EIRGTGLILGTEFV 428 (504)
T ss_pred CCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHH-hc--CCCee-------------eEEeCceEEEEEEe
Confidence 4444444444444433322 124566677777888877764 11 11111 22378899999985
No 288
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.76 E-value=1.2e-16 Score=161.71 Aligned_cols=293 Identities=15% Similarity=0.148 Sum_probs=178.0
Q ss_pred CCCchHHHHHHHHHHHhCC---CeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhcC----cccCe-
Q 013210 96 HFNPTVLNLSRQMAALEGT---EAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFP----RACNI- 165 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g~---~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~----~~~g~- 165 (447)
..++...++.++|+++.+. +.++|++||++|+..|++... ...++|+.....||+.......... ...+.
T Consensus 96 ~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~ 175 (443)
T PRK06058 96 TPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFG 175 (443)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccC
Confidence 3456667788888888642 579999999999999998432 2246899999999987644321100 00010
Q ss_pred ----eEEEeC----CCC---------------HHHHHHhhccCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCE
Q 013210 166 ----TTTFVD----ISD---------------HEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVT 218 (447)
Q Consensus 166 ----~~~~v~----~~d---------------~~~l~~~i~~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~ 218 (447)
.+..++ ..+ ++.+++.+..+++++|++|.++...|.+.| +++|.++|++||++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gil 255 (443)
T PRK06058 176 PFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVV 255 (443)
T ss_pred CCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 112121 111 223344442367899999998888887764 89999999999999
Q ss_pred EEEeCCCCCCCCCc-----c--CCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHH
Q 013210 219 VVVDNTFSPLVLSP-----A--RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFE 291 (447)
Q Consensus 219 livD~~~~~~~~~~-----~--~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~ 291 (447)
+|+||+++++.... . ....|+++ ++|.++ .|.++ |++++++++++.+..... ..+..|++++..++.+
T Consensus 256 lI~DEV~tGfgRtG~~fa~~~~gv~PDiv~--~gK~l~-~G~Pi-~av~~~~~i~~~~~~~~~-~~T~~gnpl~~aaa~a 330 (443)
T PRK06058 256 FIADEVQTGFARTGAWFACEHEGIVPDLIT--TAKGIA-GGLPL-SAVTGRAEIMDAPHPGGL-GGTYGGNPVACAAALA 330 (443)
T ss_pred EEEeccccCCCcChhhhHHHhcCCCCCEEE--Eccccc-CCCcc-EEEEEcHHHHhhccCCCC-CCCCCCCHHHHHHHHH
Confidence 99999997663211 1 22357766 689999 57888 888889898877754322 2334555555555555
Q ss_pred HHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-------HHHHHH
Q 013210 292 LSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-------EEKANR 364 (447)
Q Consensus 292 ~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-------~~~~~~ 364 (447)
.+..++. ....++..++.++|.+.|++...+. |... +..|.|.++.+++.. .+.+..
T Consensus 331 ~L~~~~~-~~l~~~~~~~g~~l~~~L~~l~~~~--~~i~-------------~vrg~G~~~~i~~~~~~~~~~~~~~~~~ 394 (443)
T PRK06058 331 AIETIEE-DDLVARARQIEALMTDRLRALAAED--DRIG-------------DVRGRGAMIAIELVKPGTTEPDAELTKA 394 (443)
T ss_pred HHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhhC--CcEE-------------eeeccceEEEEEEecCCCCCCcHHHHHH
Confidence 4443321 1234556666777777776542110 1000 122688899999842 123455
Q ss_pred HHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 365 LMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 365 l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+...+.. .|+ .+..+ +...+.|||.+. ...+++.++.+.++|++.
T Consensus 395 l~~~~~~---~Gv-~~~~~-------------------------~~~~~~lr~~Pp-l~~t~~~i~~~~~~l~~~ 439 (443)
T PRK06058 395 LAAAAHA---AGV-IVLTC-------------------------GTYGNVIRLLPP-LVIGDELLREGLDVLEAA 439 (443)
T ss_pred HHHHHHH---CCe-EEecc-------------------------CCCCCEEEEECC-CccCHHHHHHHHHHHHHH
Confidence 6666654 332 22211 011257999877 656666666665555543
No 289
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.76 E-value=6.3e-17 Score=158.81 Aligned_cols=163 Identities=19% Similarity=0.212 Sum_probs=123.1
Q ss_pred CCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhc-CCC-CeEEEeCCCchhHHHHHHh----------hcCccc
Q 013210 96 HFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLC-SSG-GHVVAARTLYGGTHALLTH----------FFPRAC 163 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~-~~g-d~Vi~~~~~y~~~~~~~~~----------~~~~~~ 163 (447)
+.++...++.++++++.+.+.++|++||++|+.++++... .+| ++||+....||+....... +.+.
T Consensus 63 ~~~~~~~~la~~l~~~~~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~-- 140 (364)
T PRK04013 63 FEHEEKEEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPL-- 140 (364)
T ss_pred cCCHHHHHHHHHHHhhcCCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCC--
Confidence 4567778899999999888899999999999999998653 345 7899999999887533311 0111
Q ss_pred CeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCcccc-C---HHHHHHHHHhcCCEEEEeCCCCCCCCC----c--c
Q 013210 164 NITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVA-N---IPELSRLAHDKGVTVVVDNTFSPLVLS----P--A 233 (447)
Q Consensus 164 g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~-~---l~~I~~la~~~gi~livD~~~~~~~~~----~--~ 233 (447)
-..+.+++.+|++++++.+ .+++++|++|+++...|.+. | +++|.++|++||+++|+||+++++... . .
T Consensus 141 ~~~~~~~~~~d~~~l~~~i-~~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~ 219 (364)
T PRK04013 141 VPGFKHIPFNDVEAAKEAI-TKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHY 219 (364)
T ss_pred CCCcEEecCCCHHHHHHHh-cCCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhc
Confidence 1234556667899999999 67899999999998888765 4 899999999999999999999655221 1 1
Q ss_pred CCCCeEEEeCCCccccCCCCeeEEEEEcChHH
Q 013210 234 RLGADVVVHSISKFISGGADIIAGAVCGPANL 265 (447)
Q Consensus 234 ~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~ 265 (447)
....|+++ ++|.+|+ |.++ |+++.+.++
T Consensus 220 gv~PDiv~--~gK~lgg-G~P~-~a~~~~~~~ 247 (364)
T PRK04013 220 KVEPDIVT--MGKGIGN-GVPV-SLTLTNFDV 247 (364)
T ss_pred CCCCCEEE--ecccccC-Ccee-EEEEecccc
Confidence 22456666 7999996 6788 666665554
No 290
>PRK07046 aminotransferase; Validated
Probab=99.76 E-value=1.2e-16 Score=161.45 Aligned_cols=218 Identities=16% Similarity=0.072 Sum_probs=146.7
Q ss_pred CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhc--------CcccCe-
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFF--------PRACNI- 165 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~--------~~~~g~- 165 (447)
.++...++.++|.++.+.+.+.|++||+||+..|++... ...++|+.....||+......... +...|.
T Consensus 113 ~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~ 192 (453)
T PRK07046 113 PSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQV 192 (453)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCC
Confidence 355567788888888888899999999999999998643 224689999999999753321110 000111
Q ss_pred -----eEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCC---CCCCCcc
Q 013210 166 -----TTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFS---PLVLSPA 233 (447)
Q Consensus 166 -----~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~---~~~~~~~ 233 (447)
.+..++.+|++++++.+..+++.+|++|.+....|.+.| +++|.++|++||+++|+||+++ ++.....
T Consensus 193 ~~~~~~~~~~~~nd~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~ 272 (453)
T PRK07046 193 HDLTATTRVVEFNDLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTR 272 (453)
T ss_pred ccccCceEeeCCCCHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhH
Confidence 234556679999999885567899999999988888876 8999999999999999999985 2221111
Q ss_pred --CCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhh--------hhhhhcCCCccHHHHHHHHccCCcHHHHH
Q 013210 234 --RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ--------GALMLLGPTMNPKVAFELSERIPHLGLRM 303 (447)
Q Consensus 234 --~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~--------~~~~~~g~~~~~~~a~~~~~~~~~l~~~~ 303 (447)
....|+++ ++|.+|+ |.++ |++++++++++.+..... ...+..|++++..++.+.+..++. ....
T Consensus 273 ~~gv~PDi~t--~gK~lgg-G~Pi-~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~-~~~~ 347 (453)
T PRK07046 273 AHGLEPDFLV--VGKPIAG-GVPC-AVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMT-EAAY 347 (453)
T ss_pred HhCCCcccee--ehhhhcC-CCcc-eeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhc-ccHH
Confidence 22356665 8999995 6777 888899999887753210 112234444444444444443322 1234
Q ss_pred HHHHHHHHHHHHHHHh
Q 013210 304 KEHCHRALIFARRMKK 319 (447)
Q Consensus 304 ~~~~~~~~~l~~~L~~ 319 (447)
++..+..++|.+.|++
T Consensus 348 ~~~~~~g~~l~~~L~~ 363 (453)
T PRK07046 348 AHMLALAARLAAGLRA 363 (453)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5556666666666654
No 291
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.76 E-value=1.9e-16 Score=159.95 Aligned_cols=287 Identities=15% Similarity=0.190 Sum_probs=178.2
Q ss_pred CCCchHHHHHHHHHHHhC---CCeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhc-----------
Q 013210 96 HFNPTVLNLSRQMAALEG---TEAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFF----------- 159 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g---~~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~----------- 159 (447)
..++...++.++|+++.+ .+.++|++||+||+..|++... ...++|+.....||+.........
T Consensus 94 ~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~ 173 (441)
T PRK05769 94 FYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFF 173 (441)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCC
Confidence 346667788888888874 3689999999999999997542 223578888888888764331110
Q ss_pred CcccCeeEEEeCCC----------C--------HHHHHH-hhc----cCCceEEEEEcCCCCCccccC----HHHHHHHH
Q 013210 160 PRACNITTTFVDIS----------D--------HEMVNS-AIV----QGRTKVLYFESISNPTLAVAN----IPELSRLA 212 (447)
Q Consensus 160 ~~~~g~~~~~v~~~----------d--------~~~l~~-~i~----~~~t~lV~i~~~~NptG~v~~----l~~I~~la 212 (447)
+...| +..++.. + ++.+++ .++ .+++.+|++|.++...|.+.| +++|.++|
T Consensus 174 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~ 251 (441)
T PRK05769 174 PLMPG--VIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLA 251 (441)
T ss_pred CCCCC--eEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHH
Confidence 11012 2223221 1 233555 221 256889999999999999988 99999999
Q ss_pred HhcCCEEEEeCCCCCCCCC-----ccCCC--CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCcc
Q 013210 213 HDKGVTVVVDNTFSPLVLS-----PARLG--ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMN 285 (447)
Q Consensus 213 ~~~gi~livD~~~~~~~~~-----~~~~g--~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~ 285 (447)
++||+++|+||+++++... ...++ .|+++ ++|.++ .|.++ |++++++++.+.+... ...+..|++++
T Consensus 252 ~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt--~~K~l~-~G~p~-gav~~~~~i~~~~~~~--~~~T~~g~p~~ 325 (441)
T PRK05769 252 DKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIIT--LAKAIA-GGLPL-GAVIGRAELMFLPPGS--HANTFGGNPVA 325 (441)
T ss_pred HHcCCEEEEechhhCCCcccceehhhccCCCCCEEE--Eccccc-CCccc-EEEEEehhhhhcCCCC--CCCCCCcCHHH
Confidence 9999999999999655321 11223 57765 789999 46777 7888888876433211 12223444444
Q ss_pred HHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH------
Q 013210 286 PKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE------ 359 (447)
Q Consensus 286 ~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~------ 359 (447)
..++...+..++. ...++..++.++|.+.|++...+...+. +..|.|.++.+++...
T Consensus 326 ~aaa~a~L~~l~~--~~~~~~~~~g~~l~~~L~~l~~~~~~~~---------------~vrg~G~~~~i~~~~~~~~~~~ 388 (441)
T PRK05769 326 AAAALATLEELEE--GLLENAQKLGEYLRKELKELKEKYEFIG---------------DVRGLGLMIGVELVKDRKEPDP 388 (441)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCee---------------eeecceEEEEEEeccCCccccH
Confidence 4444444444333 4556677777888888865421111111 1226788999998532
Q ss_pred HHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 360 EKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 360 ~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+....+.+.+.. .|++.... ....+||++. ...+++.|+.+.++|++.
T Consensus 389 ~~~~~~~~~~~~---~Gil~~~~----------------------------~~~~lr~~p~-l~~t~~~id~~~~~l~~~ 436 (441)
T PRK05769 389 KLRDKVLYEAFK---RGLLLLGA----------------------------GKSAIRIIPP-LIITEEEADIGLEILEEA 436 (441)
T ss_pred HHHHHHHHHHHh---CCcEEecC----------------------------CCCEEEEeCC-CCCCHHHHHHHHHHHHHH
Confidence 234455555554 23221110 1256899988 766666666666666544
No 292
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.76 E-value=4.2e-17 Score=164.47 Aligned_cols=253 Identities=16% Similarity=0.184 Sum_probs=161.3
Q ss_pred CCchHHHHHHHHHHHh-CCCeEEEeCChHHHHHHHHHHhcC--CCCeEEEeCCCchhHHHHHHhh--------c-CcccC
Q 013210 97 FNPTVLNLSRQMAALE-GTEAAYCTASGMSAISSVLMQLCS--SGGHVVAARTLYGGTHALLTHF--------F-PRACN 164 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~-g~~~~~~tsggt~A~~~al~~l~~--~gd~Vi~~~~~y~~~~~~~~~~--------~-~~~~g 164 (447)
.++...++.++|+++. +.+.++||+||++|+..+++.... .+++||...+.||+....+... . +...+
T Consensus 88 ~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~ 167 (426)
T PRK00062 88 PTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPG 167 (426)
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCC
Confidence 3556678888888876 467899999999999999987543 3578999999999975332111 0 00001
Q ss_pred e------eEEEeCCCCHHHHHHhhcc--CCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCCc
Q 013210 165 I------TTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLSP 232 (447)
Q Consensus 165 ~------~~~~v~~~d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~~ 232 (447)
. ....++..|++++++.+++ +++++|++|.+.+.+|.+.+ +++|.++|++||+++|+||+|+++....
T Consensus 168 ~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~ 247 (426)
T PRK00062 168 VPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL 247 (426)
T ss_pred CCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC
Confidence 1 1233455689999888732 47889999999888999988 9999999999999999999996553211
Q ss_pred ----cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhh--hhhhhcCCCccHHHHHHHHccCCcHHHHHHHH
Q 013210 233 ----ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ--GALMLLGPTMNPKVAFELSERIPHLGLRMKEH 306 (447)
Q Consensus 233 ----~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~--~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~ 306 (447)
..++++..+.+++|.++ .|+++ |++++++++++.+..... ...+..++.+...++...+..++.- ...++.
T Consensus 248 ~~~~~~~~~~pDi~~~gK~l~-~G~p~-ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~-~~~~~~ 324 (426)
T PRK00062 248 GGAQGYYGVTPDLTTLGKIIG-GGLPV-GAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEP-GFYEEL 324 (426)
T ss_pred ccHHHHhCCCcchHhhhhHhh-CCCcc-eeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcc-hHHHHH
Confidence 11233222467999999 56777 778888888887752211 1112234444444444444333221 234445
Q ss_pred HHHHHHHHHHHHh----CCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-------------HHHHHHHHHHh
Q 013210 307 CHRALIFARRMKK----LGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-------------EEKANRLMNYL 369 (447)
Q Consensus 307 ~~~~~~l~~~L~~----~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-------------~~~~~~l~~~l 369 (447)
.+..+++.+.|++ ++..... .|.|.++.+.+.. ...+..+...|
T Consensus 325 ~~~~~~~~~~l~~~~~~~~~~~~v-------------------rg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l 385 (426)
T PRK00062 325 EALTKRLAEGLKEAAKKAGIPLTV-------------------NRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAM 385 (426)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEE-------------------EEecceEEEEEecCCCcchhhhccccHHHHHHHHHHH
Confidence 5555555555543 3432111 1467899988852 12245677776
Q ss_pred hc
Q 013210 370 QN 371 (447)
Q Consensus 370 ~~ 371 (447)
..
T Consensus 386 ~~ 387 (426)
T PRK00062 386 LD 387 (426)
T ss_pred HH
Confidence 65
No 293
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.76 E-value=2.9e-16 Score=147.04 Aligned_cols=254 Identities=21% Similarity=0.279 Sum_probs=163.3
Q ss_pred CchHHHHHHHHHHHhCCCeEEEe---CChHHHHHHHHHHhcCCCCeEEE-eCCCchhHHHHHH------hhcCcccCeeE
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCT---ASGMSAISSVLMQLCSSGGHVVA-ARTLYGGTHALLT------HFFPRACNITT 167 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~t---sggt~A~~~al~~l~~~gd~Vi~-~~~~y~~~~~~~~------~~~~~~~g~~~ 167 (447)
+.-++.+++..|+.+|+|++++- -|||.|+..+|.++++|||+++. +..-|......+- .-+.. .|+.+
T Consensus 53 D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e-~Gi~Y 131 (403)
T PF06838_consen 53 DIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKE-FGIKY 131 (403)
T ss_dssp -HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGG-GT-EE
T ss_pred CccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHH-hCcee
Confidence 45668899999999999998875 59999999999999999999886 4455766665551 11122 58888
Q ss_pred EEeCCC-----CHHHHHHhhccCCceEEEEEc----CCCCCccccCHHHHHHHHHh--cCCEEEEeCCCCCCC--CCccC
Q 013210 168 TFVDIS-----DHEMVNSAIVQGRTKVLYFES----ISNPTLAVANIPELSRLAHD--KGVTVVVDNTFSPLV--LSPAR 234 (447)
Q Consensus 168 ~~v~~~-----d~~~l~~~i~~~~t~lV~i~~----~~NptG~v~~l~~I~~la~~--~gi~livD~~~~~~~--~~~~~ 234 (447)
..++.. |.+.+++++ +++|++|++.- ..-|.-.+.+++++.+++|+ .+++++||++|+.|. ..|.+
T Consensus 132 ~~v~L~~dg~~D~~~i~~~~-~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~ 210 (403)
T PF06838_consen 132 REVPLTEDGTIDWEAIKKAL-KPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEPTE 210 (403)
T ss_dssp EE--B-TTSSB-HHHHHHHH-HTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GGG
T ss_pred EEEeecCCCCcCHHHHHHhh-ccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCccc
Confidence 888764 899999999 78999999972 34455566677888888876 479999999999886 46888
Q ss_pred CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHH--hhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHH
Q 013210 235 LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDL--HQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALI 312 (447)
Q Consensus 235 ~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~--~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 312 (447)
.|+|++.+|+-|..|+.-...|||+++++++++..... ..+.+.-.|.++... ....+++---+..+.+-.+-+..
T Consensus 211 vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~~~--R~~~QGlFlAP~vV~eAlKgaif 288 (403)
T PF06838_consen 211 VGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLGTN--RLMFQGLFLAPHVVGEALKGAIF 288 (403)
T ss_dssp GT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TTTH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccccccCcchH--HHHHhHHhhchHHHHHHHHHHHH
Confidence 89999999999999987777899999999999877543 222222344443322 11222322223344444555666
Q ss_pred HHHHHHhCCCeeeCCC-CCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 313 FARRMKKLGLKVLYPG-LEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 313 l~~~L~~~~~~v~~p~-~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
.+..++++|+++.... .+++. -+-++.|.+.+...+|++..+.
T Consensus 289 ~A~~fe~lG~~v~P~~~~~R~D----------------iIQai~l~~~e~l~~FC~~iQ~ 332 (403)
T PF06838_consen 289 AAALFEKLGFEVSPKPDDPRSD----------------IIQAIELGSPEKLIAFCQGIQA 332 (403)
T ss_dssp HHHHHHHTT-EEES-TTS--SS----------------S-EEEE-SSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcCCCCCCCCCCc----------------eEEEEECCCHHHHHHHHHHHHh
Confidence 6677788898765321 12222 2888999999999999999885
No 294
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.76 E-value=5.1e-16 Score=157.63 Aligned_cols=252 Identities=12% Similarity=0.178 Sum_probs=153.4
Q ss_pred CCchHHHHHHHHHHHhCC---CeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhcCc------ccC-
Q 013210 97 FNPTVLNLSRQMAALEGT---EAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPR------ACN- 164 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~---~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~------~~g- 164 (447)
.++...++.++|+++.+. +.++|++||+||+..|++... ....+||.....||+........... ..+
T Consensus 95 ~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~ 174 (451)
T PRK06918 95 MYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGP 174 (451)
T ss_pred ccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCC
Confidence 456667888889888753 579999999999999998543 22357899999998876443211000 000
Q ss_pred --eeEEEeCCCC-----------------HHHHHHhh----ccCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCC
Q 013210 165 --ITTTFVDISD-----------------HEMVNSAI----VQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGV 217 (447)
Q Consensus 165 --~~~~~v~~~d-----------------~~~l~~~i----~~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi 217 (447)
..+..++..+ ++.+++.+ ..+++.+|++|.++...|.+.+ +++|.++|++||+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gi 254 (451)
T PRK06918 175 FAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGI 254 (451)
T ss_pred CCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 1122222110 12333333 1257889999999888887654 8899999999999
Q ss_pred EEEEeCCCCCCCCCc-----cCCC--CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHH
Q 013210 218 TVVVDNTFSPLVLSP-----ARLG--ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAF 290 (447)
Q Consensus 218 ~livD~~~~~~~~~~-----~~~g--~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~ 290 (447)
++|+||+|+++.... ..++ .| +.|++|.++ +|.++ |++++++++++.+..... ..+..++.+.+.++.
T Consensus 255 llI~DEV~tg~gr~g~~~a~~~~~v~pD--i~t~sK~l~-~G~pi-g~v~~~~~i~~~~~~~~~-~~T~~g~~l~~aaa~ 329 (451)
T PRK06918 255 LFVADEIQTGFARTGKYFAIEHFDVVPD--LITVSKSLG-AGVPI-SGVIGRKEIMDESAPGEL-GGTYAGSPLGCAAAL 329 (451)
T ss_pred EEEEeccccCcCccCceehhHhcCCCCC--EEeeehhhc-CCCcc-EEEEEcHHHHhccCCCCc-CcCCCcCHHHHHHHH
Confidence 999999997663321 2234 55 457999999 68999 999999998877753322 223445555555544
Q ss_pred HHHccC--CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC--------CHH
Q 013210 291 ELSERI--PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME--------TEE 360 (447)
Q Consensus 291 ~~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~--------~~~ 360 (447)
..+..+ ..+. ++..+..+++.+.|++...+ +|... ...|.|+++.+.+. +..
T Consensus 330 a~l~~i~~~~~~---~~~~~~g~~l~~~l~~l~~~--~~~~~-------------~vrg~G~~~~~~~~~~~~~~~~~~~ 391 (451)
T PRK06918 330 AVLDIIEKENLN---DRAIELGKVVMNRFEEMKNK--YNCIG-------------DVRGLGAMCAFELVQDRKTKEPDKT 391 (451)
T ss_pred HHHHHHHHCCHH---HHHHHHHHHHHHHHHHHHhh--CCCce-------------eeccceeEEEEEEccCCCcCCCcHH
Confidence 444322 2232 33444445566666543111 11100 11256778888773 223
Q ss_pred HHHHHHHHhhc
Q 013210 361 KANRLMNYLQN 371 (447)
Q Consensus 361 ~~~~l~~~l~~ 371 (447)
.+..+...+..
T Consensus 392 ~~~~l~~~~~~ 402 (451)
T PRK06918 392 LTANICKEANK 402 (451)
T ss_pred HHHHHHHHHHH
Confidence 35566666664
No 295
>PRK06105 aminotransferase; Provisional
Probab=99.75 E-value=1.9e-16 Score=160.64 Aligned_cols=243 Identities=14% Similarity=0.175 Sum_probs=153.2
Q ss_pred CCCCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhc------C-C-CCeEEEeCCCchhHHHHHHhhcC----
Q 013210 95 RHFNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLC------S-S-GGHVVAARTLYGGTHALLTHFFP---- 160 (447)
Q Consensus 95 r~~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~------~-~-gd~Vi~~~~~y~~~~~~~~~~~~---- 160 (447)
+..++...++.++|+++.. .+.++|++||+||+.+|++... . + ..+|+.....||+........-.
T Consensus 88 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~ 167 (460)
T PRK06105 88 HKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNN 167 (460)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCccc
Confidence 3456767789999999874 3579999999999999998642 1 2 35788888888876532211000
Q ss_pred -cccC---eeEEEeCCC------------------CHHHHHHhhc---cCCceEEEEEcCCCCCccccC----HHHHHHH
Q 013210 161 -RACN---ITTTFVDIS------------------DHEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPELSRL 211 (447)
Q Consensus 161 -~~~g---~~~~~v~~~------------------d~~~l~~~i~---~~~t~lV~i~~~~NptG~v~~----l~~I~~l 211 (447)
+..+ ..+..++.. ..+++++.+. .+++.+|++|.++...|.+.+ +++|.++
T Consensus 168 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~l 247 (460)
T PRK06105 168 HRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAV 247 (460)
T ss_pred ccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHH
Confidence 0011 012222221 1355676662 246899999999999998876 9999999
Q ss_pred HHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhh------hhhh
Q 013210 212 AHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ------GALM 278 (447)
Q Consensus 212 a~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~------~~~~ 278 (447)
|++||+++|+||+++++.. .-.....|+++ ++|.+++...++ |++++++++++.+..... ...+
T Consensus 248 c~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~--~gK~lggG~~P~-~av~~~~~i~~~~~~~~~~~~~~~h~~T 324 (460)
T PRK06105 248 LRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILV--MSKQLSSSYQPL-SAVLMNEKVYDPIADESGKIGTFGHGFT 324 (460)
T ss_pred HHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeee--eecccccCcccc-eEEEEcHHHHHHHhcccccCcccccCCC
Confidence 9999999999999966532 11122356665 899999643466 888888888877653210 1122
Q ss_pred hcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 279 LLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 279 ~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
..|++++..++.+.+..++. ....++.++..++|.+.|++. .+ +|... +..|.|.++.+++.
T Consensus 325 ~~gnpl~~aaa~a~L~~i~~-~~l~~~v~~~g~~l~~~L~~l-~~--~~~v~-------------~vrG~Gl~~gie~~ 386 (460)
T PRK06105 325 ASGHPVAAAVALENLAIIEE-RDLVGNAAERGARLQARLRAL-AD--HPLVG-------------EVRGVGLIAAVELV 386 (460)
T ss_pred CCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHh-hc--CCCeE-------------EEEecceEEEEEEe
Confidence 34444444444444433322 134566677777777777765 21 12111 22378889999984
No 296
>PRK12403 putative aminotransferase; Provisional
Probab=99.75 E-value=2.2e-16 Score=160.20 Aligned_cols=242 Identities=14% Similarity=0.124 Sum_probs=144.5
Q ss_pred CCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhc-------CCCC-eEEEeCCCchhHHH-HHHhhc-C--cc
Q 013210 97 FNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLC-------SSGG-HVVAARTLYGGTHA-LLTHFF-P--RA 162 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~-------~~gd-~Vi~~~~~y~~~~~-~~~~~~-~--~~ 162 (447)
.++...++.++|+++.+ .+.++|++||++|+..|++... ++++ .|+.....||+... .+.... . +.
T Consensus 96 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~ 175 (460)
T PRK12403 96 THPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHE 175 (460)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccc
Confidence 45667889999999986 4689999999999999998653 1223 35555666776532 221000 0 00
Q ss_pred cC---eeEEEeCCC-----------------CHHHHHHhhc---cCCceEEEEEcCCCCCccccC----HHHHHHHHHhc
Q 013210 163 CN---ITTTFVDIS-----------------DHEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPELSRLAHDK 215 (447)
Q Consensus 163 ~g---~~~~~v~~~-----------------d~~~l~~~i~---~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~ 215 (447)
.+ ..+..++.. +.+++++.+. .+++.+|++|.+....|.+.| +++|.++|++|
T Consensus 176 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~ 255 (460)
T PRK12403 176 MGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY 255 (460)
T ss_pred cCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc
Confidence 00 012233211 1345655542 246789999999999999887 99999999999
Q ss_pred CCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhh---hhhhhcCCCcc
Q 013210 216 GVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ---GALMLLGPTMN 285 (447)
Q Consensus 216 gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~---~~~~~~g~~~~ 285 (447)
|+++|+||+++++.. .-.....|+++ ++|.+++.-..+ |++++++++.+.+..... ...+..|++++
T Consensus 256 g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gK~lggG~~Pi-ga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~ 332 (460)
T PRK12403 256 DVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLS--IAKGLTSGYVPM-GGLVLSKRIAEALVEQGGVFAHGLTYSGHPVA 332 (460)
T ss_pred CCEEEEeccccCCCcCchhhhhhhcCCCCCeEE--Ecccccccccce-EEEEECHHHHHHHhcCCCccccCCCCCCCHHH
Confidence 999999999966621 11223457776 899999532367 656678888777642111 11123344333
Q ss_pred HHHHHHHHccCCcHHHHHHHHH-HHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 286 PKVAFELSERIPHLGLRMKEHC-HRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 286 ~~~a~~~~~~~~~l~~~~~~~~-~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
..++.+.++.++.- ...++.. ++.++|.+.|++...+....+ +..|.|.++.++|.
T Consensus 333 ~Aaala~L~~i~~~-~l~~~~~~~~g~~l~~~L~~l~~~~~~i~---------------~vrG~Gl~~gie~~ 389 (460)
T PRK12403 333 AAVAIANLKALRDE-GVVTRVKDDTGPYLQRCLREVFGDHPLVG---------------EVQGAGLVAALQFA 389 (460)
T ss_pred HHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHhcCCCEE---------------eEeecceEEEEEEc
Confidence 43444444333221 1344553 566667776654311110001 22378899999995
No 297
>PRK07678 aminotransferase; Validated
Probab=99.75 E-value=3.7e-16 Score=158.22 Aligned_cols=297 Identities=11% Similarity=0.100 Sum_probs=177.7
Q ss_pred CCCchHHHHHHHHHHHhCC-CeEEEeCChHHHHHHHHHHhcC-------CC-CeEEEeCCCchhHHHHHHhh--------
Q 013210 96 HFNPTVLNLSRQMAALEGT-EAAYCTASGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHALLTHF-------- 158 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g~-~~~~~tsggt~A~~~al~~l~~-------~g-d~Vi~~~~~y~~~~~~~~~~-------- 158 (447)
..++...++.++|+++.+. +.++|++||+||+..|++.... +| .+|+.....||+........
T Consensus 86 ~~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~ 165 (451)
T PRK07678 86 QSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKY 165 (451)
T ss_pred cCCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCccccc
Confidence 3456667888899888754 4699999999999999986421 23 57999999998865433111
Q ss_pred --cCcccCeeEEEeCCC--------------C---HHHHHHhhc---cCCceEEEEEcCCCCCccccC----HHHHHHHH
Q 013210 159 --FPRACNITTTFVDIS--------------D---HEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPELSRLA 212 (447)
Q Consensus 159 --~~~~~g~~~~~v~~~--------------d---~~~l~~~i~---~~~t~lV~i~~~~NptG~v~~----l~~I~~la 212 (447)
.+...| +.+++.. + ++.+++.++ .+++.+|++|.+....|.+.| ++++.++|
T Consensus 166 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc 243 (451)
T PRK07678 166 KYEPLAPG--FLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEIC 243 (451)
T ss_pred ccCCCCCC--CEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHH
Confidence 111012 2222211 1 223555563 357899999999988888875 88999999
Q ss_pred HhcCCEEEEeCCCCCCCCC-----ccCCC--CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHh-----hhhhhhc
Q 013210 213 HDKGVTVVVDNTFSPLVLS-----PARLG--ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH-----QGALMLL 280 (447)
Q Consensus 213 ~~~gi~livD~~~~~~~~~-----~~~~g--~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~-----~~~~~~~ 280 (447)
++||+++|+||+++++... ...+| .|+++ ++|.+|+...++ |++++++++++.+.... ....+..
T Consensus 244 ~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt--~gK~lggG~~Pi-~av~~~~~i~~~~~~~~~~~~~~h~~T~~ 320 (451)
T PRK07678 244 QKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIIT--MAKGITSAYLPL-SATAVKKEIYEAFKGKGEYEHFRHVNTFG 320 (451)
T ss_pred HHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEE--eecccccCCcce-eEEEEcHHHHHHHhccCcccccccCCCCC
Confidence 9999999999999666321 11234 57665 899999644578 88888889887775311 1123344
Q ss_pred CCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--
Q 013210 281 GPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-- 358 (447)
Q Consensus 281 g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-- 358 (447)
|++++..++.+.+..++. ....++..+..++|.+.|++.-.+ +|... +..|.|.++.+++..
T Consensus 321 gnp~~~aaa~a~l~~l~~-~~~~~~~~~~g~~l~~~l~~~~~~--~~~v~-------------~vrg~Gl~~~i~~~~~~ 384 (451)
T PRK07678 321 GNPAACALALKNLEIMEN-ENLIERSAQLGELLLEQLKEELGE--HPLVG-------------DIRGKGLLVGIELVNDK 384 (451)
T ss_pred cCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHhc--CCCEE-------------EEEeeceEEEEEEecCC
Confidence 555554444444443321 123445556666666666542111 11000 122678899999841
Q ss_pred -------HHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013210 359 -------EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 431 (447)
Q Consensus 359 -------~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 431 (447)
...+..+...+.. .|++. ...+ +... ...+.|||++. ...++++|+.
T Consensus 385 ~~~~~~~~~~a~~i~~~l~~---~Gv~~-~~~g-------~~v~--------------~~~~~lrl~Pp-l~it~~eid~ 438 (451)
T PRK07678 385 ETKEPADNDKVASVVAACKE---KGLII-GKNG-------DTVA--------------GYNNVLTLSPP-LVISSEEIAF 438 (451)
T ss_pred cccCcCchHHHHHHHHHHHH---CCcEE-eecC-------cccc--------------CCCCEEEEECC-CcCCHHHHHH
Confidence 2234566666665 23322 1110 1000 01367999888 6555666666
Q ss_pred HHHHHHHh
Q 013210 432 FEKALSRM 439 (447)
Q Consensus 432 l~~al~~~ 439 (447)
+.++|++.
T Consensus 439 ~~~~l~~~ 446 (451)
T PRK07678 439 IVGTLKTA 446 (451)
T ss_pred HHHHHHHH
Confidence 55555543
No 298
>PRK06062 hypothetical protein; Provisional
Probab=99.74 E-value=3.7e-16 Score=158.10 Aligned_cols=244 Identities=14% Similarity=0.215 Sum_probs=148.6
Q ss_pred CCCCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcC-C-CCeEEEeCCCchhHHHHHHhhc---------Cc
Q 013210 95 RHFNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLCS-S-GGHVVAARTLYGGTHALLTHFF---------PR 161 (447)
Q Consensus 95 r~~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~~-~-gd~Vi~~~~~y~~~~~~~~~~~---------~~ 161 (447)
...++...++.++|+++.. .+.++|++||+||+..|++.... . ..+||.....||+........- +.
T Consensus 91 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~ 170 (451)
T PRK06062 91 AHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTG 170 (451)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCC
Confidence 3456667888889998864 46899999999999999986432 2 3579999888888754331110 00
Q ss_pred ccCeeEEEeCC---------CC-------HHHHHHhhcc---CCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCE
Q 013210 162 ACNITTTFVDI---------SD-------HEMVNSAIVQ---GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVT 218 (447)
Q Consensus 162 ~~g~~~~~v~~---------~d-------~~~l~~~i~~---~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~ 218 (447)
..|+.....+. +| ++++++.++. +++.+|++|.+....|.+.| +++|.++|++||++
T Consensus 171 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~l 250 (451)
T PRK06062 171 RAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIV 250 (451)
T ss_pred CCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 01211111110 12 5677777732 46789999999999999987 99999999999999
Q ss_pred EEEeCCCCCCCCC-----ccCCC--CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHh-hhhhhhcCCCccHHHHH
Q 013210 219 VVVDNTFSPLVLS-----PARLG--ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH-QGALMLLGPTMNPKVAF 290 (447)
Q Consensus 219 livD~~~~~~~~~-----~~~~g--~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~-~~~~~~~g~~~~~~~a~ 290 (447)
+|+||+++++... ...+| .|++ +++|.+|+.-.++ |++++++++++.+.... ....+..|++++..++.
T Consensus 251 LI~DEV~tGfGRtG~~~a~~~~gv~PDi~--t~gK~lggG~~Pi-gav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~ 327 (451)
T PRK06062 251 LIADEVMAGFGRTGKWFAIEHFGVVPDLI--TFAKGVNSGYVPL-GGVAISEAIAATFADRPYPGGLTYSGHPLACAAAV 327 (451)
T ss_pred EEeeccccCCCcCcHHHHHHhcCCCCCee--eechhhhcCCcCc-EEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHH
Confidence 9999999766321 11223 5655 5899999522367 66777778887775321 11223444444444444
Q ss_pred HHHccCCcHHHHHHHHHHHH-HHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 291 ELSERIPHLGLRMKEHCHRA-LIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 291 ~~~~~~~~l~~~~~~~~~~~-~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
+.+..++.- ...++..+.. ++|.+.|++...+. |... ...|.|.++.+++.
T Consensus 328 a~L~~l~~~-~l~~~~~~~G~~~l~~~L~~l~~~~--~~v~-------------~vrG~Gl~~gve~~ 379 (451)
T PRK06062 328 ATINAMEEE-GIVENAARIGAEVLGPGLRELAERH--PSVG-------------EVRGLGVFWALELV 379 (451)
T ss_pred HHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhcC--CcEE-------------eEeccccEEEEEEc
Confidence 444333211 1333344443 35555665431111 1000 12267889999985
No 299
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.74 E-value=2.2e-16 Score=159.81 Aligned_cols=219 Identities=15% Similarity=0.159 Sum_probs=145.0
Q ss_pred CCchHHHHHHHHHHHh-CCCeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhh---------cCcccC
Q 013210 97 FNPTVLNLSRQMAALE-GTEAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHF---------FPRACN 164 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~-g~~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~---------~~~~~g 164 (447)
.++...++.++|.+.. +.+.+.|++||+||+..|++... ...++|+.....||+....+... .+...|
T Consensus 137 ~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g 216 (474)
T PLN02482 137 PCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPG 216 (474)
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCC
Confidence 3444556777777765 45789999999999999998543 22368999999999976432100 010012
Q ss_pred e------eEEEeCCCCHHHHHHhhcc--CCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCCc
Q 013210 165 I------TTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLSP 232 (447)
Q Consensus 165 ~------~~~~v~~~d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~~ 232 (447)
. .+..++.+|++++++.++. +++.+|++|.+.+..|.+.| +++|.++|++||+++|+||+++++....
T Consensus 217 ~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~ 296 (474)
T PLN02482 217 VPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAY 296 (474)
T ss_pred CCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCc
Confidence 1 2344566789999988832 46889999999999998876 6689999999999999999996653221
Q ss_pred ----cCCC--CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhh--hhhhhcCCCccHHHHHHHHccCCcHHHHHH
Q 013210 233 ----ARLG--ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ--GALMLLGPTMNPKVAFELSERIPHLGLRMK 304 (447)
Q Consensus 233 ----~~~g--~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~--~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~ 304 (447)
..+| .|++ +++|.+|+ |.++ |++++++++++.+..... ...+..+++++..++...+..++. ....+
T Consensus 297 ~ga~~~~gv~PDi~--t~gK~lgg-G~Pi-gav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~-~~~~~ 371 (474)
T PLN02482 297 GGAQEYFGITPDLT--TLGKVIGG-GLPV-GAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ-PGTYE 371 (474)
T ss_pred chHhHHhCCCCCEE--EecchhhC-CCce-EEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc-cCHHH
Confidence 1123 5664 58999994 6778 666889999887753111 111233444444444444443332 23556
Q ss_pred HHHHHHHHHHHHHHhC
Q 013210 305 EHCHRALIFARRMKKL 320 (447)
Q Consensus 305 ~~~~~~~~l~~~L~~~ 320 (447)
+..++.++|.+.|++.
T Consensus 372 ~~~~~g~~l~~~L~~l 387 (474)
T PLN02482 372 YLDKITKKLIQGILEA 387 (474)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6677777888877664
No 300
>PLN02263 serine decarboxylase
Probab=99.74 E-value=2.7e-15 Score=149.30 Aligned_cols=222 Identities=14% Similarity=0.131 Sum_probs=155.4
Q ss_pred CCchHHHHHHHHHHHhCCCe----EEEeCChHHHHHHHHHHhcC--CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEe
Q 013210 97 FNPTVLNLSRQMAALEGTEA----AYCTASGMSAISSVLMQLCS--SGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 170 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~----~~~tsggt~A~~~al~~l~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v 170 (447)
....-.++-+.+++++|.++ .++|+|||+||..++.+... +...++++...|.++...+. .+|++++.+
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~-----llgi~~~~V 205 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAAR-----MYRMECVKV 205 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHH-----hcCCcceEe
Confidence 33444456666777887632 69999999999999876543 23468889999998887772 367777777
Q ss_pred CCC-----CHHHHHHhhccCC--ceEEEEEcCCCCCccccCHHHHHHHHHhcCC-----EEEEeCCCCCCCC----Cc--
Q 013210 171 DIS-----DHEMVNSAIVQGR--TKVLYFESISNPTLAVANIPELSRLAHDKGV-----TVVVDNTFSPLVL----SP-- 232 (447)
Q Consensus 171 ~~~-----d~~~l~~~i~~~~--t~lV~i~~~~NptG~v~~l~~I~~la~~~gi-----~livD~~~~~~~~----~~-- 232 (447)
+.+ |+++|+++|.++. +.+|+....+.++|.+-|+++|+++|+++|+ ++|||++|+++.. ..
T Consensus 206 p~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~ 285 (470)
T PLN02263 206 DTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPK 285 (470)
T ss_pred ccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccc
Confidence 765 8999999884332 4566677888999999999999999999997 9999999955432 11
Q ss_pred cC--CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHH----HhhhhhhhcCCCc--cHHHHHHHHcc--CCcHHHH
Q 013210 233 AR--LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMD----LHQGALMLLGPTM--NPKVAFELSER--IPHLGLR 302 (447)
Q Consensus 233 ~~--~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~----~~~~~~~~~g~~~--~~~~a~~~~~~--~~~l~~~ 302 (447)
.+ .++|-++.+.||+++.|-. . |+++.++...+.+.. +........|+.. .....|..++. .+.+.++
T Consensus 286 ~df~~~vDSIsvD~HK~l~~P~~-c-gvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~ 363 (470)
T PLN02263 286 VTFKKPIGSVSVSGHKFVGCPMP-C-GVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKE 363 (470)
T ss_pred cCCCcCccEEEECCccccCCCcC-E-EEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHH
Confidence 11 1489999999999997765 3 766666554433321 1110011223322 23455655553 3557788
Q ss_pred HHHHHHHHHHHHHHHHhCCCeee
Q 013210 303 MKEHCHRALIFARRMKKLGLKVL 325 (447)
Q Consensus 303 ~~~~~~~~~~l~~~L~~~~~~v~ 325 (447)
+++..++++++.+.|++.+..+.
T Consensus 364 i~~~~~~A~~l~~~l~~~g~~~~ 386 (470)
T PLN02263 364 VQKCLRNAHYLKDRLREAGISAM 386 (470)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEE
Confidence 89999999999999999887443
No 301
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=2.9e-17 Score=156.26 Aligned_cols=287 Identities=14% Similarity=0.196 Sum_probs=203.9
Q ss_pred chHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHH
Q 013210 99 PTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMV 178 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l 178 (447)
....++|+.+|+++|.+++++++-|-..|.+.+.+++.+|.-|+..+..|.+...-+ +..|+.++....+|.++|
T Consensus 182 ~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~~Ga-----RLSgAtiRVfkHNdm~~L 256 (519)
T KOG1357|consen 182 EEHKELEELVARFLGVEDAIVFSMGFATNSMNIPSLLGKGSLIISDELNHASLITGA-----RLSGATTRVFRHNDMQGL 256 (519)
T ss_pred HHHHHHHHHHHHhcCCcceEEEeccccccccCcceeecCCcceeeccccchheeccc-----cccCceEEEEecCCHHHH
Confidence 455789999999999999999999999999999999999988888888777665443 557899998899999999
Q ss_pred HHhhcc------CCc------eEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCC----------CCccCC
Q 013210 179 NSAIVQ------GRT------KVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLV----------LSPARL 235 (447)
Q Consensus 179 ~~~i~~------~~t------~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~----------~~~~~~ 235 (447)
|+.+++ ++| -+|+++...++-|.+.+++++.+++++|.++++.||++ .+.. +.+...
T Consensus 257 Er~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~ 336 (519)
T KOG1357|consen 257 ERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPE 336 (519)
T ss_pred HHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCch
Confidence 887731 233 36778999999999999999999999999999999998 2221 112223
Q ss_pred CCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCc---------HHHHHHHH
Q 013210 236 GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPH---------LGLRMKEH 306 (447)
Q Consensus 236 g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~---------l~~~~~~~ 306 (447)
.+|+++++++|++|..| |++.+++++++.++..... ...+..+++..+...+..++. ..++.+++
T Consensus 337 dvDImMGtftKSfga~G----Gyiagsk~lid~lrt~s~~--~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l 410 (519)
T KOG1357|consen 337 DVDIMMGTFTKSFGAAG----GYIAGSKELIDYLRTPSPS--ALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERL 410 (519)
T ss_pred hheeecceehhhccccc----ceecCcHHHHhhhccCCCc--eeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHH
Confidence 58999999999999754 9999999999888654321 134444554444443333222 34677888
Q ss_pred HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCcc
Q 013210 307 CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYE 386 (447)
Q Consensus 307 ~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~ 386 (447)
.++..+++..|+..++.+.. ..++| ++-+.+-.+.....|-+.|.... +++-.++
T Consensus 411 ~~ns~yfr~~l~~~gfivyG--~~dSp-----------------Vvplll~~~~k~~~f~r~~l~~n----igvVvvg-- 465 (519)
T KOG1357|consen 411 AENSRYFRWELQKMGFIVYG--NNDSP-----------------VVPLLLYGPAKIVAFSREMLERN----IGVVVVG-- 465 (519)
T ss_pred HhhhHHHHHhhhcCcEEEec--CCCCC-----------------cceeeecCcccccHHHHHHHhcC----ceEEEEe--
Confidence 99999999999888876653 23333 44444332222344544444321 3332222
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 387 TLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 387 s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
.|+.. +.++.+|++.. ..++.+.++.+.+++++..
T Consensus 466 ----fPatp--------------l~e~r~R~c~S-a~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 466 ----FPATP--------------LLESRARFCLS-ASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred ----CCCch--------------HHHhHHHhhhc-ccccHHHHHHHHHHHhhhc
Confidence 13321 22466899999 8888888888888777664
No 302
>PRK07482 hypothetical protein; Provisional
Probab=99.73 E-value=2.8e-16 Score=159.41 Aligned_cols=241 Identities=10% Similarity=0.111 Sum_probs=149.9
Q ss_pred CCCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhc------C-C-CCeEEEeCCCchhHHHHHHh--------
Q 013210 96 HFNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLC------S-S-GGHVVAARTLYGGTHALLTH-------- 157 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~------~-~-gd~Vi~~~~~y~~~~~~~~~-------- 157 (447)
..++...++.++|+++.. .+.++|++||+||+..|++... . + ..+||.....||+.......
T Consensus 91 ~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~ 170 (461)
T PRK07482 91 HGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFH 170 (461)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhh
Confidence 456666788888988874 4679999999999999998653 1 1 35789999999885432110
Q ss_pred --hcCcccCeeEEEeCCC------------------CHHHHHHhhc---cCCceEEEEEcCCCCCccccC----HHHHHH
Q 013210 158 --FFPRACNITTTFVDIS------------------DHEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPELSR 210 (447)
Q Consensus 158 --~~~~~~g~~~~~v~~~------------------d~~~l~~~i~---~~~t~lV~i~~~~NptG~v~~----l~~I~~ 210 (447)
+.+...+ +..++.. +++++++.+. .+++.+|++|.+....|.+.+ +++|.+
T Consensus 171 ~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~ 248 (461)
T PRK07482 171 QHFDLPIAR--VLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQA 248 (461)
T ss_pred hccCCCCCC--CEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHH
Confidence 1111011 1122111 3567777773 256899999999988888864 889999
Q ss_pred HHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHh------hhhh
Q 013210 211 LAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH------QGAL 277 (447)
Q Consensus 211 la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~------~~~~ 277 (447)
+|++||+++|+||+++++.. .-.....|+++ ++|.+++.-.++ |++++++++.+.+.... ....
T Consensus 249 lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~~Pi-~av~~~~~i~~~~~~~~~~~~~~~h~~ 325 (461)
T PRK07482 249 VLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLIT--VAKGLTSAYAPL-SGSIVGEKVWDVLEQGSDEHGAIGHGW 325 (461)
T ss_pred HHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEE--EccccccCcccc-ceeeecHHHHHHHhcccccCCccccCC
Confidence 99999999999999976632 11222467777 899998532367 67777888877664211 1122
Q ss_pred hhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 278 MLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 278 ~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
+..|++++..++.+.+..++. ....++..+..++|.+.|++.-.+....+ +..|.|.++.++|.
T Consensus 326 T~~gnpl~~Aaa~a~L~~~~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~v~---------------~vrG~Glm~giel~ 389 (461)
T PRK07482 326 TYSGHPICAAAALANLDILER-ENLVGNAAEVGAYFRARLRAAFGDHPLVG---------------EVRGVGMLAAVEFV 389 (461)
T ss_pred CCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHhcCCCEE---------------EEeeceeEEEEEec
Confidence 344555554444444433321 11334455666666666654311100001 12268889999995
No 303
>PLN02880 tyrosine decarboxylase
Probab=99.73 E-value=1.7e-15 Score=154.38 Aligned_cols=285 Identities=17% Similarity=0.178 Sum_probs=174.8
Q ss_pred HHHHHHHHHHhCCCe---------EEEeCChHHHHHHHHHHhcC-----C-----CC-eEEEeCCCchhHHHHHHhhcCc
Q 013210 102 LNLSRQMAALEGTEA---------AYCTASGMSAISSVLMQLCS-----S-----GG-HVVAARTLYGGTHALLTHFFPR 161 (447)
Q Consensus 102 ~~l~~~ia~l~g~~~---------~~~tsggt~A~~~al~~l~~-----~-----gd-~Vi~~~~~y~~~~~~~~~~~~~ 161 (447)
.++-+.+++++|.++ .++|+|||+||..++.+... . .. .|++++..|.++...+. +
T Consensus 125 ~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~-~--- 200 (490)
T PLN02880 125 MIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQ-I--- 200 (490)
T ss_pred HHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHH-H---
Confidence 445556677777543 68999999999988865421 1 12 45568888888887773 2
Q ss_pred ccCe---eEEEeCCC-------CHHHHHHhhccC-----CceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCC
Q 013210 162 ACNI---TTTFVDIS-------DHEMVNSAIVQG-----RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS 226 (447)
Q Consensus 162 ~~g~---~~~~v~~~-------d~~~l~~~i~~~-----~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~ 226 (447)
.|+ .++.|+.+ |+++|+++|++. .+-+|+.+..+..+|.+-|+++|+++|++||+++|||.+|+
T Consensus 201 -lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~g 279 (490)
T PLN02880 201 -AGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYA 279 (490)
T ss_pred -cCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhH
Confidence 343 24444442 889999888321 24566667778899999999999999999999999999995
Q ss_pred CC-CCCc------cCC-CCeEEEeCCCccccCCCCeeEEEEEcCh-H-HHHHHHHHhhhhhh-----------------h
Q 013210 227 PL-VLSP------ARL-GADVVVHSISKFISGGADIIAGAVCGPA-N-LVNSMMDLHQGALM-----------------L 279 (447)
Q Consensus 227 ~~-~~~~------~~~-g~di~~~S~sK~~g~~g~~igG~l~~~~-~-~~~~l~~~~~~~~~-----------------~ 279 (447)
+. ...+ ..+ ++|.++.++||+++.|-. . |+++.+. . +...+... ..+.. .
T Consensus 280 g~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~-~-g~llvr~~~~l~~~~~~~-~~Yl~~~~~~~~~~~~~~~~~i~ 356 (490)
T PLN02880 280 GSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFD-C-SLLWVKDRNALIQSLSTN-PEFLKNKASQANSVVDYKDWQIP 356 (490)
T ss_pred HHHHhCHHHHHHhcCchhcCEEEECchhhcCCCcc-E-EEEEEeCHHHHHHHHccC-HHHhcCccccccCCCChhccCcC
Confidence 53 2221 222 689999999999997754 3 6665543 2 22222110 00000 0
Q ss_pred cCCCccHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEe
Q 013210 280 LGPTMNPKVAFELSE--RIPHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDM 356 (447)
Q Consensus 280 ~g~~~~~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l 356 (447)
.|-.......|..++ +.+.+.+++++..++++++.+.|++.+. ++..|. ..++++|.+
T Consensus 357 ~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~-------------------~~~iv~Fr~ 417 (490)
T PLN02880 357 LGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR-------------------IFSLVCFRL 417 (490)
T ss_pred CCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-------------------ceEEEEEEE
Confidence 111112333443333 4455777788888999999999987754 665543 123889988
Q ss_pred CC----HHH----HHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHH
Q 013210 357 ET----EEK----ANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQR 428 (447)
Q Consensus 357 ~~----~~~----~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~ 428 (447)
+. .+. ..++.++|...+ .+.++.- .. -....+|+|++...++++.
T Consensus 418 ~~~~~~~~~~~~~n~~l~~~l~~~g---~~~v~~t----------~~--------------~g~~~lR~~~~n~~tt~~d 470 (490)
T PLN02880 418 VPPKNNEDNGNKLNHDLLDAVNSSG---KIFISHT----------VL--------------SGKYVLRFAVGAPLTEERH 470 (490)
T ss_pred eCCCCChhhHHHHHHHHHHHHHhCC---CEEEEEE----------EE--------------CCEEEEEEEecCCCCCHHH
Confidence 63 111 234555554321 1111110 00 0135799999933455577
Q ss_pred HHHHHHHHHHhh
Q 013210 429 WSQFEKALSRMQ 440 (447)
Q Consensus 429 i~~l~~al~~~~ 440 (447)
++.+.+.+.++.
T Consensus 471 i~~~~~~i~~~~ 482 (490)
T PLN02880 471 VTAAWKVLQDEA 482 (490)
T ss_pred HHHHHHHHHHHH
Confidence 777777776553
No 304
>PRK06541 hypothetical protein; Provisional
Probab=99.73 E-value=5.5e-16 Score=157.11 Aligned_cols=239 Identities=16% Similarity=0.178 Sum_probs=152.5
Q ss_pred CCCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcC----C----CCeEEEeCCCchhHHHHHHhh-------
Q 013210 96 HFNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLCS----S----GGHVVAARTLYGGTHALLTHF------- 158 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~~----~----gd~Vi~~~~~y~~~~~~~~~~------- 158 (447)
..++...++.++|+++.. .+.++|++||+||+..|++.... . ..+|+.....||+........
T Consensus 92 ~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~ 171 (460)
T PRK06541 92 YAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFK 171 (460)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhc
Confidence 345666788888988864 36799999999999999975431 1 368999998888875433111
Q ss_pred ---cCcccCeeEEEeCC----------CC--------HHHHHHhhc---cCCceEEEEEcCCCCCccccC----HHHHHH
Q 013210 159 ---FPRACNITTTFVDI----------SD--------HEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPELSR 210 (447)
Q Consensus 159 ---~~~~~g~~~~~v~~----------~d--------~~~l~~~i~---~~~t~lV~i~~~~NptG~v~~----l~~I~~ 210 (447)
.+...| +..++. ++ ++.+++.+. ..++.+|++|.++++.|.+.+ +++|.+
T Consensus 172 ~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~ 249 (460)
T PRK06541 172 APFEPLVPG--GFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVRE 249 (460)
T ss_pred cccCCCCCC--cEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHH
Confidence 111112 222221 11 356777773 246788999999999999987 999999
Q ss_pred HHHhcCCEEEEeCCCCCCCC-----Cc--cCCCCeEEEeCCCccccCCCC-eeEEEEEcChHHHHHHHHHhh---hhhhh
Q 013210 211 LAHDKGVTVVVDNTFSPLVL-----SP--ARLGADVVVHSISKFISGGAD-IIAGAVCGPANLVNSMMDLHQ---GALML 279 (447)
Q Consensus 211 la~~~gi~livD~~~~~~~~-----~~--~~~g~di~~~S~sK~~g~~g~-~igG~l~~~~~~~~~l~~~~~---~~~~~ 279 (447)
+|++||+++|+||+|+++.. .. .....|+++ ++|.++ .|. ++ |++++++++++.+..... ...+.
T Consensus 250 lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt--~gK~l~-~G~~pi-gav~~~~~i~~~~~~~~~~~~~~~T~ 325 (460)
T PRK06541 250 ICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT--CAKGIT-SGYSPL-GAMIASDRLFEPFLDGPTMFLHGYTF 325 (460)
T ss_pred HHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE--eccccc-CCccce-eEEEEcHHHHHHhhcCCCccccCCCC
Confidence 99999999999999965521 11 122357665 899999 454 67 778888888877653211 01122
Q ss_pred cCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 280 LGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 280 ~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
.+++++..++.+.+..++. ....++..++.++|.+.|+++.. +|... ...|.|.++.++|.
T Consensus 326 ~gnp~~~aaala~l~~l~~-~~~~~~~~~~g~~l~~~L~~l~~---~~~v~-------------~vrg~Gl~~~ie~~ 386 (460)
T PRK06541 326 GGHPVSAAVALANLDIFER-EGLLDHVRDNEPAFRATLEKLLD---LPIVG-------------DVRGDGYFYGIELV 386 (460)
T ss_pred CCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHhhc---CCCeE-------------EEEecceEEEEEEe
Confidence 3333333333333332221 12456778888888888876521 11111 12267889999984
No 305
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.73 E-value=6.5e-16 Score=156.56 Aligned_cols=294 Identities=16% Similarity=0.190 Sum_probs=175.0
Q ss_pred CCCCchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHH-HHHhh---------cC
Q 013210 95 RHFNPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHA-LLTHF---------FP 160 (447)
Q Consensus 95 r~~~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~-~~~~~---------~~ 160 (447)
+..++...++.++|+++.+. +.++|++||++|+..|++... ....+|+.....||+... .+... .+
T Consensus 109 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 188 (459)
T PRK06082 109 RFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGP 188 (459)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCC
Confidence 45567778999999999853 579999999999999997542 223688888888887642 22100 00
Q ss_pred cccCeeEEEeCC--------CC--------HHHHHHhhcc-CCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEE
Q 013210 161 RACNITTTFVDI--------SD--------HEMVNSAIVQ-GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVV 220 (447)
Q Consensus 161 ~~~g~~~~~v~~--------~d--------~~~l~~~i~~-~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~li 220 (447)
...+ +..++. .+ ++.+++.++. +++.+|++|.+.+..+.+.| +++|.++|++||+++|
T Consensus 189 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI 266 (459)
T PRK06082 189 LMAG--VERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLI 266 (459)
T ss_pred CCCC--CEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 0011 222221 11 3457777732 46889999999887544555 8999999999999999
Q ss_pred EeCCCCCCCCC-------ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHH
Q 013210 221 VDNTFSPLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELS 293 (447)
Q Consensus 221 vD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~ 293 (447)
+||+++++... -.....|+++ ++|.+++....+ |+++.++++......... ..+..|++++..++.+.+
T Consensus 267 ~DEV~tG~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~~P~-~av~~~~~i~~~~~~~~~-~~T~~gnpl~~aaa~a~L 342 (459)
T PRK06082 267 IDEIPNGMGRTGEWFTHQAYGIEPDILC--IGKGLGGGLVPI-AAMITKDKYNTAAQISLG-HYTHEKSPLGCAAALATI 342 (459)
T ss_pred EechhhCCCccchhhHhHhhCCCCCEEE--ecccccCCCCcc-eEEEEcHHHHhhccCCCC-CCCCCcCHHHHHHHHHHH
Confidence 99999665321 1122467776 899999643467 777777776543321111 122344444444444444
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--------HHHHHH
Q 013210 294 ERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--------EKANRL 365 (447)
Q Consensus 294 ~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--------~~~~~l 365 (447)
..++. ....++..++.++|.+.|+++..+...++ +..|.|.++.++|... +.+..+
T Consensus 343 ~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~i~---------------~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~ 406 (459)
T PRK06082 343 EVIEQ-EGLLEKVKADSQFMRERLLEMKAKYPLIG---------------DVRGIGLLWGVELVTDRHTKERAYDEAEAV 406 (459)
T ss_pred HHHHh-cCHHHHHHHHHHHHHHHHHHHHhhCCCee---------------eeeeccceeEEEEccCccccCccHHHHHHH
Confidence 33321 12455667777777777765421111111 2237889999999521 123445
Q ss_pred HHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCC---CCCHHHHHHHHHHHHHHhhh
Q 013210 366 MNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGY---LGTLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 366 ~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~---~~~~~~~i~~l~~al~~~~~ 441 (447)
+..+.. .|++. . + + ..+.|||+..+ .+++++.++.|+++|.++.+
T Consensus 407 ~~~~~~---~Gvl~-~----------~-~----------------~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 454 (459)
T PRK06082 407 LYRCLN---NGLSF-K----------V-S----------------QGNVIQLSPPLIITREELTQALAILEEAIAKICQ 454 (459)
T ss_pred HHHHHh---CCCEE-E----------e-c----------------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhh
Confidence 555443 23211 1 0 0 12568887651 35666666777777766643
No 306
>PRK07481 hypothetical protein; Provisional
Probab=99.73 E-value=1.9e-15 Score=152.98 Aligned_cols=240 Identities=15% Similarity=0.193 Sum_probs=150.1
Q ss_pred CCchHHHHHHHHHHHhC---CCeEEEeCChHHHHHHHHHHhcC-------CC-CeEEEeCCCchhHHHHHHh--------
Q 013210 97 FNPTVLNLSRQMAALEG---TEAAYCTASGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHALLTH-------- 157 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g---~~~~~~tsggt~A~~~al~~l~~-------~g-d~Vi~~~~~y~~~~~~~~~-------- 157 (447)
.++...++.++|+++.+ .+.++|++||+||+..|++.... +| .+|+.....||+.......
T Consensus 84 ~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~ 163 (449)
T PRK07481 84 THPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFR 163 (449)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccc
Confidence 46667788899998873 46799999999999999985431 23 5799999999886432211
Q ss_pred --hcCcccCeeEEEeC--------CC--CHHH--------HHHhhc---cCCceEEEEEcCCCCCccccC----HHHHHH
Q 013210 158 --FFPRACNITTTFVD--------IS--DHEM--------VNSAIV---QGRTKVLYFESISNPTLAVAN----IPELSR 210 (447)
Q Consensus 158 --~~~~~~g~~~~~v~--------~~--d~~~--------l~~~i~---~~~t~lV~i~~~~NptG~v~~----l~~I~~ 210 (447)
+.+...|+ ..++ .+ |++. +++.+. .+++.+|++|.++...|.+.+ +++|.+
T Consensus 164 ~~~~~~~~g~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~ 241 (449)
T PRK07481 164 RNYEPLLPGC--FHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVRE 241 (449)
T ss_pred cccCCCCCCC--EEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHH
Confidence 01111122 2221 11 4333 344442 256899999999998898765 889999
Q ss_pred HHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHh------hhhh
Q 013210 211 LAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH------QGAL 277 (447)
Q Consensus 211 la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~------~~~~ 277 (447)
+|++||+++|+||+++++.. .......|+++ ++|.+++.-.++ |++++++++++.+.... ....
T Consensus 242 lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~~Pi-~av~~~~~i~~~~~~~~~~~~~~~h~~ 318 (449)
T PRK07481 242 VCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMC--LAKGITSGYVPL-GATMVNARIADAFEANADFGGAIMHGY 318 (449)
T ss_pred HHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEE--EeecccCCCcCc-eEEEEcHHHHHHHhccCccccccccCC
Confidence 99999999999999966632 11222456666 799998532467 77888888887775321 1122
Q ss_pred hhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 278 MLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 278 ~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
+..|++++..++.+.+..++. ....++..+..++|.+.|++...+..... +..|.|.++.++|.
T Consensus 319 T~~gnpl~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~i~---------------~vrG~Glm~gi~l~ 382 (449)
T PRK07481 319 TYSGHPVACAAALATLDIVVR-EDLPANAAKRGAYLLEGLQPLKERFELVG---------------DVRGKGLMLALDLV 382 (449)
T ss_pred CCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhhcCCCeE---------------EEeecceEEEEEec
Confidence 344555544444444433322 12345556666777777765421110001 22378889999984
No 307
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=2.5e-15 Score=141.93 Aligned_cols=285 Identities=19% Similarity=0.218 Sum_probs=192.3
Q ss_pred cccccccccccCCH-HHHHHhhcCCCC--CCCCCccccCCCCchHHH-HHHHHHHHhCCCeEEE-eCChHHHHHHHHHHh
Q 013210 60 MSIEASATFTVMEP-ETMRRMFAGELG--PDRDFFIYSRHFNPTVLN-LSRQMAALEGTEAAYC-TASGMSAISSVLMQL 134 (447)
Q Consensus 60 ~pi~~att~~~~~~-~~~~~~~~~~~~--~~~~~~~~~r~~~~~~~~-l~~~ia~l~g~~~~~~-tsggt~A~~~al~~l 134 (447)
-.+-+|-.++.+.+ +++-..|.++|. -|...|+-|-..-..++. +.++..+++|++.+-+ --||+.||.+++.++
T Consensus 29 ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~Al 108 (413)
T COG0112 29 IELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLAL 108 (413)
T ss_pred eeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHH
Confidence 35677888888887 666677777663 233333333322233443 4455667889987533 459999999999999
Q ss_pred cCCCCeEEEeCCCchhHHHHHHhhcCcccC--eeEEEeCCC------CHHHHHHhhccCCceEEEEEcCCCCCccccCHH
Q 013210 135 CSSGGHVVAARTLYGGTHALLTHFFPRACN--ITTTFVDIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIP 206 (447)
Q Consensus 135 ~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g--~~~~~v~~~------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~ 206 (447)
++|||+|+..+..++++...-... ...| +++..++++ |.|++++.++..++++|+.-. +-.-...|.+
T Consensus 109 l~pGDtimgm~l~~GGHltHg~~v--~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~--SaY~r~id~~ 184 (413)
T COG0112 109 LQPGDTIMGLDLSHGGHLTHGSPV--NFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGG--SAYSRPIDFK 184 (413)
T ss_pred cCCCCeEecccCCCCCcccCCCCC--CccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECc--cccccccCHH
Confidence 999999999998887765332110 1122 233333333 899999988677899998743 2234567999
Q ss_pred HHHHHHHhcCCEEEEeCCC-CCC-----CCCccCCCCeEEEeCCCccccCCCCeeEEEEEcC-hHHHHHHHHHhhhhhhh
Q 013210 207 ELSRLAHDKGVTVVVDNTF-SPL-----VLSPARLGADVVVHSISKFISGGADIIAGAVCGP-ANLVNSMMDLHQGALML 279 (447)
Q Consensus 207 ~I~~la~~~gi~livD~~~-~~~-----~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~-~~~~~~l~~~~~~~~~~ 279 (447)
++.++|++.|+++.+|.+| .++ ..+|... +|+++.|.||.+.|| | ||++..+ +++.+++...-. .+..
T Consensus 185 ~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~-AdvVTtTTHKTlrGP--r-GG~Il~~~eel~kkin~aVF-Pg~q 259 (413)
T COG0112 185 RFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH-ADVVTTTTHKTLRGP--R-GGIILTNDEELAKKINSAVF-PGLQ 259 (413)
T ss_pred HHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc-cceEeCCcccCCCCC--C-ceEEEeccHHHHHHhhhhcC-CccC
Confidence 9999999999999999998 443 4567776 999999999999877 3 6888776 488888876322 1113
Q ss_pred cCCCccHHHHHH--HHccC-CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEe
Q 013210 280 LGPTMNPKVAFE--LSERI-PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDM 356 (447)
Q Consensus 280 ~g~~~~~~~a~~--~~~~~-~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l 356 (447)
.|+.+...+|.+ ....+ ..+.+..++..+|++.|++.|.+.|+++..-+..+| ++.+++
T Consensus 260 ggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnH------------------l~lVDl 321 (413)
T COG0112 260 GGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNH------------------LVLVDL 321 (413)
T ss_pred CChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccce------------------EEEEEc
Confidence 333343333332 22233 335677788899999999999999998775432222 666666
Q ss_pred C----CHHHHHHHHHHhhc
Q 013210 357 E----TEEKANRLMNYLQN 371 (447)
Q Consensus 357 ~----~~~~~~~l~~~l~~ 371 (447)
. +...++..+.+..+
T Consensus 322 ~~~~~~Gk~ae~~L~~~~I 340 (413)
T COG0112 322 RSKGLTGKKAEAALERAGI 340 (413)
T ss_pred ccCCCCHHHHHHHHHHcCE
Confidence 5 34456666666553
No 308
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.73 E-value=7e-16 Score=155.53 Aligned_cols=218 Identities=15% Similarity=0.188 Sum_probs=146.0
Q ss_pred CCchHHHHHHHHHHHh-CCCeEEEeCChHHHHHHHHHHhcC-C-CCeEEEeCCCchhHHHHHHhhc---------CcccC
Q 013210 97 FNPTVLNLSRQMAALE-GTEAAYCTASGMSAISSVLMQLCS-S-GGHVVAARTLYGGTHALLTHFF---------PRACN 164 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~-g~~~~~~tsggt~A~~~al~~l~~-~-gd~Vi~~~~~y~~~~~~~~~~~---------~~~~g 164 (447)
.++...++.++|.++. +.+.++|++||+||+..|++.... . ..+|+.....||+......... +...+
T Consensus 91 ~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~ 170 (428)
T PRK12389 91 PTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAG 170 (428)
T ss_pred CCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCC
Confidence 4555677888887766 357799999999999999985432 2 3578998988988654331110 00011
Q ss_pred ------eeEEEeCCCCHHHHHHhhcc--CCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCCc
Q 013210 165 ------ITTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLSP 232 (447)
Q Consensus 165 ------~~~~~v~~~d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~~ 232 (447)
..+..++..|++.+++.++. +++.+|++|.+.+..|.+.| +++|.++|++||+++|+||+++++....
T Consensus 171 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~ 250 (428)
T PRK12389 171 VPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMY 250 (428)
T ss_pred CCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCc
Confidence 13445566689999888832 46889999999999999887 9999999999999999999997652211
Q ss_pred ------cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHh--hhhhhhcCCCccHHHHHHHHccCCcHHHHHH
Q 013210 233 ------ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH--QGALMLLGPTMNPKVAFELSERIPHLGLRMK 304 (447)
Q Consensus 233 ------~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~--~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~ 304 (447)
.....|++ +++|.+++ |.++ |++++++++++.+.... ....+..|++++..++.+.+..++.- ...+
T Consensus 251 ~~a~~~~gv~PDiv--t~gK~lgg-G~Pi-~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~-~l~~ 325 (428)
T PRK12389 251 GGAQDLLGVEPDLT--ALGKIIGG-GLPI-GAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE-GVYE 325 (428)
T ss_pred chhhHHhCCCCCee--eechhhcC-CCce-eEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcc-cHHH
Confidence 12235665 58999985 5778 66688888888774211 11222344444444444444433321 2455
Q ss_pred HHHHHHHHHHHHHHh
Q 013210 305 EHCHRALIFARRMKK 319 (447)
Q Consensus 305 ~~~~~~~~l~~~L~~ 319 (447)
+..++.++|.+.|++
T Consensus 326 ~~~~~g~~l~~~L~~ 340 (428)
T PRK12389 326 KLDRLGAMLEEGILE 340 (428)
T ss_pred HHHHHHHHHHHHHHH
Confidence 666677777777765
No 309
>PRK05965 hypothetical protein; Provisional
Probab=99.73 E-value=1e-15 Score=155.23 Aligned_cols=296 Identities=14% Similarity=0.195 Sum_probs=181.1
Q ss_pred CCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcC-------C-CCeEEEeCCCchhHHHHHHhhc-----Cc
Q 013210 97 FNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLCS-------S-GGHVVAARTLYGGTHALLTHFF-----PR 161 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~~-------~-gd~Vi~~~~~y~~~~~~~~~~~-----~~ 161 (447)
.++...+|.++|+++.. .+.++|++||+||+..|++.... + ..+||.....||+......... ..
T Consensus 88 ~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~ 167 (459)
T PRK05965 88 GSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHR 167 (459)
T ss_pred CCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhc
Confidence 45556778888888863 46799999999999999975431 2 2579999999988753211110 00
Q ss_pred ccC---eeEEEeCC---------CC--------HHHHHHhhcc---CCceEEEEEcCCCCCccccC----HHHHHHHHHh
Q 013210 162 ACN---ITTTFVDI---------SD--------HEMVNSAIVQ---GRTKVLYFESISNPTLAVAN----IPELSRLAHD 214 (447)
Q Consensus 162 ~~g---~~~~~v~~---------~d--------~~~l~~~i~~---~~t~lV~i~~~~NptG~v~~----l~~I~~la~~ 214 (447)
..+ ..+..++. +| ++++++.++. +++.+|++|.++...|.+.+ +++|.++|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~ 247 (459)
T PRK05965 168 GFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRE 247 (459)
T ss_pred ccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHH
Confidence 011 01122221 12 2567776732 56899999999998898764 8899999999
Q ss_pred cCCEEEEeCCCCCCCC-----Cc--cCCCCeEEEeCCCccccCCC-CeeEEEEEcChHHHHHHHHHh------hhhhhhc
Q 013210 215 KGVTVVVDNTFSPLVL-----SP--ARLGADVVVHSISKFISGGA-DIIAGAVCGPANLVNSMMDLH------QGALMLL 280 (447)
Q Consensus 215 ~gi~livD~~~~~~~~-----~~--~~~g~di~~~S~sK~~g~~g-~~igG~l~~~~~~~~~l~~~~------~~~~~~~ 280 (447)
||+++|+||+++++.. .. .....|+++ ++|.+++ | .++ |++++++++.+.+.... ....+..
T Consensus 248 ~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~g-G~~Pi-~av~~~~~i~~~~~~~~~~~~~~~h~~T~~ 323 (459)
T PRK05965 248 LGILFVADEVITGFGRTGPLFACEAEGVVPDLMT--VAKGLTS-GYVPM-GAVLMSDHVYQGIADGAGAAAPVGHGYTYS 323 (459)
T ss_pred cCCEEEEechhccCccCchhhhHhhcCCCCCeEE--echhhcc-CCcce-eEEEEcHHHHHHHhccccccccccccCCCC
Confidence 9999999999976632 11 122456766 8999995 5 478 77888888887764310 1122344
Q ss_pred CCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-
Q 013210 281 GPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE- 359 (447)
Q Consensus 281 g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~- 359 (447)
|++++..++.+.+..++. ....++..+..++|.+.|++.. + +|... +..|.|.++.+++...
T Consensus 324 gnpl~~Aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~l~~l~-~--~~~v~-------------~vrG~Gl~~gie~~~~~ 386 (459)
T PRK05965 324 AHPVSAAVGLEVLRLYHE-GGLLANGQKAGPRFAAGLDALR-A--HPLVG-------------DVRGRGLLGALELVADK 386 (459)
T ss_pred CCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHhhc-c--CCCEE-------------EEeecceEEEEEEeccc
Confidence 555544444444433321 1234556667777777776642 1 22111 2237889999998521
Q ss_pred ----------HHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCC---CCCHH
Q 013210 360 ----------EKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGY---LGTLD 426 (447)
Q Consensus 360 ----------~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~---~~~~~ 426 (447)
..+..+...+.. .|++....| .+.||+++.+ .++++
T Consensus 387 ~~~~~~~~~~~~~~~i~~~~~~---~Gll~~~~g----------------------------~~~i~~~PpL~it~~ei~ 435 (459)
T PRK05965 387 ATKTPFDAALDPADRIFDRAYA---NGLVFRAFG----------------------------DGVLGFAPALCCTEGEFD 435 (459)
T ss_pred cccCCCCchhHHHHHHHHHHHh---CCeEEEecC----------------------------CcEEEEECCCcCCHHHHH
Confidence 123455555554 333221111 2457777331 57777
Q ss_pred HHHHHHHHHHHHhhhcCC
Q 013210 427 QRWSQFEKALSRMQDSGV 444 (447)
Q Consensus 427 ~~i~~l~~al~~~~~~~~ 444 (447)
+.++.|.++|+++.+.+.
T Consensus 436 ~~~~~l~~~l~~~~~~~~ 453 (459)
T PRK05965 436 LIFERTRKTLDDVLADPD 453 (459)
T ss_pred HHHHHHHHHHHHHhcCcc
Confidence 778888888877755443
No 310
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.72 E-value=9.2e-16 Score=155.00 Aligned_cols=288 Identities=13% Similarity=0.154 Sum_probs=175.8
Q ss_pred CCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcC-------C-CCeEEEeCCCchhHHHHHHh---------
Q 013210 97 FNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLCS-------S-GGHVVAARTLYGGTHALLTH--------- 157 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~~-------~-gd~Vi~~~~~y~~~~~~~~~--------- 157 (447)
.++...++.++|+++.. .+.++|++||+||+..|++.... + ..+||.....||+.......
T Consensus 90 ~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~ 169 (445)
T PRK09221 90 GHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRK 169 (445)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhh
Confidence 45666788899998864 46899999999999999975431 1 25799999999876432110
Q ss_pred -hcCcccCeeEEEeCCC------------------CHHHHHHhhc---cCCceEEEEEcCCCCCccccC----HHHHHHH
Q 013210 158 -FFPRACNITTTFVDIS------------------DHEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPELSRL 211 (447)
Q Consensus 158 -~~~~~~g~~~~~v~~~------------------d~~~l~~~i~---~~~t~lV~i~~~~NptG~v~~----l~~I~~l 211 (447)
+.+. ...+.+++.. .++++++.++ .+++.+|++|.+....|.+.| +++|.++
T Consensus 170 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~l 247 (445)
T PRK09221 170 MFGGL--LPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREI 247 (445)
T ss_pred ccCCC--CCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHH
Confidence 0110 0112222211 1356677663 146889999999999999988 9999999
Q ss_pred HHhcCCEEEEeCCCCCCCC-----CccCCC--CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHh------hhhhh
Q 013210 212 AHDKGVTVVVDNTFSPLVL-----SPARLG--ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH------QGALM 278 (447)
Q Consensus 212 a~~~gi~livD~~~~~~~~-----~~~~~g--~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~------~~~~~ 278 (447)
|++||+++|+||+++++.. ....++ .|+++ ++|.+++...++ |++++++++++.+.... ....+
T Consensus 248 c~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~--~gK~l~gG~~Pi-~av~~~~~i~~~~~~~~~~~~~~~~~~T 324 (445)
T PRK09221 248 CDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIIT--FAKGLTNGAIPM-GAVIASDEIYDAFMQGPEYAIEFFHGYT 324 (445)
T ss_pred HHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEE--eccccccCcccc-eeeEEcHHHHHhhccCcccccccccccC
Confidence 9999999999999965531 111223 46654 899998543556 77788888887764310 01112
Q ss_pred hcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013210 279 LLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 358 (447)
Q Consensus 279 ~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 358 (447)
..++.+...++.+.+..++. ....++..++.++|.+.|+++.. +|.+. +..|.|.++.+++..
T Consensus 325 ~~~~pl~~aaa~a~L~~i~~-~~l~~~~~~~g~~l~~~l~~l~~---~~~v~-------------~vrg~Gl~~~v~~~~ 387 (445)
T PRK09221 325 YSAHPVACAAGLATLDIYRE-EDLFERAAELAPYFEDAVHSLKG---LPHVI-------------DIRNIGLVAGIELAP 387 (445)
T ss_pred CCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHhhcc---CCCEE-------------EEecCceEEEEEEec
Confidence 33444433333333333221 12456677777888888876521 11111 112677788888753
Q ss_pred H-----HHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHH
Q 013210 359 E-----EKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFE 433 (447)
Q Consensus 359 ~-----~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~ 433 (447)
. ..+..+...+.. .|+ .+..+ .+.|||++. ...+++.|+.+.
T Consensus 388 ~~~~~~~~~~~~~~~~~~---~Gv-~~~~~----------------------------~~~lr~~Pp-l~~t~~eid~~~ 434 (445)
T PRK09221 388 RPGAPGARGYEAFMKCFE---KGL-LVRYT----------------------------GDTIALSPP-LIIEKAQIDELV 434 (445)
T ss_pred ccccccchHHHHHHHHHH---CCe-EEeec----------------------------CCEEEEECC-ccCCHHHHHHHH
Confidence 1 123455566654 232 21111 256999987 666666666666
Q ss_pred HHHHHh
Q 013210 434 KALSRM 439 (447)
Q Consensus 434 ~al~~~ 439 (447)
++|++.
T Consensus 435 ~~l~~~ 440 (445)
T PRK09221 435 DALGDA 440 (445)
T ss_pred HHHHHH
Confidence 666544
No 311
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.72 E-value=1.6e-15 Score=161.36 Aligned_cols=220 Identities=17% Similarity=0.158 Sum_probs=153.1
Q ss_pred chHHHHHHHHHHHhCCCe-EEEeCChHHHHHHHHHHhcC--------CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEE
Q 013210 99 PTVLNLSRQMAALEGTEA-AYCTASGMSAISSVLMQLCS--------SGGHVVAARTLYGGTHALLTHFFPRACNITTTF 169 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~~-~~~tsggt~A~~~al~~l~~--------~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~ 169 (447)
....++++.|+++.|.+. .++.++|+.|..++++++.. ..+.|+++...|+.....+. ..|++++.
T Consensus 530 q~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~-----~~G~~Vv~ 604 (939)
T TIGR00461 530 ELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAA-----MAGMQVVP 604 (939)
T ss_pred HHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHH-----HCCCEEEE
Confidence 456789999999999987 46667788777766655432 23578899999976665552 36889888
Q ss_pred eCCC-----CHHHHHHhhcc--CCceEEEEEcCCCCCccccC-HHHHHHHHHhcCCEEEEeCCC-C-C-CCCCccCCCCe
Q 013210 170 VDIS-----DHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN-IPELSRLAHDKGVTVVVDNTF-S-P-LVLSPARLGAD 238 (447)
Q Consensus 170 v~~~-----d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~-l~~I~~la~~~gi~livD~~~-~-~-~~~~~~~~g~d 238 (447)
++.+ |+++|++.+.. +++++|++.+|+| +|.+.| +++|+++||++|..+++|.++ . . ...+|.++|+|
T Consensus 605 V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaD 683 (939)
T TIGR00461 605 VNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGAD 683 (939)
T ss_pred eccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCC
Confidence 8864 89999999942 5899999999999 799877 999999999999999999998 3 2 23456788999
Q ss_pred EEEeCCCcccc------CCCCeeEEEEEcChHHHHHHHHH----------hhh-----hhhhcCCCccHHHHHHHHc--c
Q 013210 239 VVVHSISKFIS------GGADIIAGAVCGPANLVNSMMDL----------HQG-----ALMLLGPTMNPKVAFELSE--R 295 (447)
Q Consensus 239 i~~~S~sK~~g------~~g~~igG~l~~~~~~~~~l~~~----------~~~-----~~~~~g~~~~~~~a~~~~~--~ 295 (447)
++++|.||+++ ||| + |+++.++++...+-.. +.. ....++.......++..++ +
T Consensus 684 i~~~s~HKtf~~P~G~GGPg--~-G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG 760 (939)
T TIGR00461 684 VCHLNLHKTFCIPHGGGGPG--M-GPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMG 760 (939)
T ss_pred EEEecCCccCCCCCCCCCCC--e-EEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHC
Confidence 99999999665 333 4 8888876654433110 000 0001111111223333322 3
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 013210 296 IPHLGLRMKEHCHRALIFARRMKKLGLKVLYPG 328 (447)
Q Consensus 296 ~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~ 328 (447)
-+.+.+..+....+++++.+.|++ +.++.+++
T Consensus 761 ~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~ 792 (939)
T TIGR00461 761 NEGLPKASVVAILNANYMATRLKD-HYPILFVG 792 (939)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-cCcccccC
Confidence 344656666677899999999987 34555543
No 312
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.72 E-value=1.8e-15 Score=152.76 Aligned_cols=288 Identities=12% Similarity=0.140 Sum_probs=174.2
Q ss_pred CCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcC-------C-CCeEEEeCCCchhHHHHHHh---------
Q 013210 97 FNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLCS-------S-GGHVVAARTLYGGTHALLTH--------- 157 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~~-------~-gd~Vi~~~~~y~~~~~~~~~--------- 157 (447)
.++...++.++|+++.. .+.++|++||+||+..|++.... + ..+||.....||+.......
T Consensus 87 ~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~ 166 (442)
T PRK13360 87 GHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRK 166 (442)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhh
Confidence 45666788888988863 46899999999999999975431 1 25799999999886422100
Q ss_pred -hcCcccCeeEEEeCCC------------------CHHHHHHhhc---cCCceEEEEEcCCCCCccccC----HHHHHHH
Q 013210 158 -FFPRACNITTTFVDIS------------------DHEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPELSRL 211 (447)
Q Consensus 158 -~~~~~~g~~~~~v~~~------------------d~~~l~~~i~---~~~t~lV~i~~~~NptG~v~~----l~~I~~l 211 (447)
+.+. ...+.+++.. .+++|++.++ .+++.+|++|.+....|.+.| +++|.++
T Consensus 167 ~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~l 244 (442)
T PRK13360 167 AFGAL--LPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREI 244 (442)
T ss_pred ccCCC--CCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHH
Confidence 0110 0112222221 1457777773 256889999999999999988 9999999
Q ss_pred HHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHh------hhhhh
Q 013210 212 AHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH------QGALM 278 (447)
Q Consensus 212 a~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~------~~~~~ 278 (447)
|++||+++|+||+++++.. .......|++ +++|.+++...++ |+++.++++.+.+.... ....+
T Consensus 245 c~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv--t~gK~l~gG~~P~-gav~~~~~i~~~~~~~~~~~~~~~~~~T 321 (442)
T PRK13360 245 CDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLL--TCAKGLTNGAIPM-GAVFVSSEIHDAFMQGPEAGIEFFHGYT 321 (442)
T ss_pred HHHcCCEEEEechhhCCCCCccchhhhhcCCCCcee--eeeeccccCccce-EEEEEcHHHHHHhhcCCccccccccCCC
Confidence 9999999999999965521 1112235665 5899998643567 66777888887664311 01122
Q ss_pred hcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013210 279 LLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 358 (447)
Q Consensus 279 ~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 358 (447)
..++.++..++.+.+..++. ....++..++.+++.+.|++... +|.+. +..|.|.++.+.+..
T Consensus 322 ~~g~pl~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~l~~l~~---~~~v~-------------~vrG~Gl~~~~~l~~ 384 (442)
T PRK13360 322 YSGHPLACAAALATLDLYER-EGLLTRAARLAPYWEDALHSLRD---APHVI-------------DIRNLGLVGAVELAP 384 (442)
T ss_pred CCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHhhc---CCCee-------------eeeccceEEEEEEec
Confidence 33444443333333333221 12445566677777777765421 11110 112567777777742
Q ss_pred -----HHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHH
Q 013210 359 -----EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFE 433 (447)
Q Consensus 359 -----~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~ 433 (447)
...+..+...+.. .|+ .+..+ .+.+||++. ...+++.|+.+.
T Consensus 385 ~~~~~~~~~~~~~~~l~~---~Gv-l~~~~----------------------------~~~lr~~Pp-l~~t~~eid~~~ 431 (442)
T PRK13360 385 RDGKPGKRAYEVFLKCFE---KGL-MIRYT----------------------------GDILALSPP-LIIEEAQIDELF 431 (442)
T ss_pred CCCCcchhHHHHHHHHHH---CCc-EEEec----------------------------CCEEEEeCC-CccCHHHHHHHH
Confidence 1234456556554 232 11111 256899977 666666666666
Q ss_pred HHHHHh
Q 013210 434 KALSRM 439 (447)
Q Consensus 434 ~al~~~ 439 (447)
++|++.
T Consensus 432 ~~l~~~ 437 (442)
T PRK13360 432 DILAQA 437 (442)
T ss_pred HHHHHH
Confidence 666544
No 313
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.72 E-value=3.1e-15 Score=151.44 Aligned_cols=252 Identities=13% Similarity=0.164 Sum_probs=152.4
Q ss_pred CchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhc---C-cccCe----
Q 013210 98 NPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFF---P-RACNI---- 165 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~---~-~~~g~---- 165 (447)
++...++.++|+++.+. +.++|++||+||+..|++... ....+|+.....||+......... . ...+.
T Consensus 95 ~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~ 174 (457)
T PRK05639 95 SERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLM 174 (457)
T ss_pred CHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCC
Confidence 45567788888888753 579999999999999998643 234578888988988654321110 0 00111
Q ss_pred -eEEEeCCC-------------CH--------HHHHHhhc-----cCCceEEEEEcCCCCCccccC----HHHHHHHHHh
Q 013210 166 -TTTFVDIS-------------DH--------EMVNSAIV-----QGRTKVLYFESISNPTLAVAN----IPELSRLAHD 214 (447)
Q Consensus 166 -~~~~v~~~-------------d~--------~~l~~~i~-----~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~ 214 (447)
.+.+++.. +. +.+++.+. .+++.+|++|.++...|.+.| +++|.++|++
T Consensus 175 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~ 254 (457)
T PRK05639 175 PNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDE 254 (457)
T ss_pred CCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 13333322 12 23444431 357899999999998898765 8899999999
Q ss_pred cCCEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHH
Q 013210 215 KGVTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPK 287 (447)
Q Consensus 215 ~gi~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~ 287 (447)
||+++|+||+++++... ......|+++ ++|.+++ |..+ |++++++++++ +.. .....+..++++...
T Consensus 255 ~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~g-G~pi-~av~~~~~i~~-~~~-~~~~~T~~g~p~~~a 328 (457)
T PRK05639 255 HGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII--FGKGVAS-GMGL-SGVIGRKELMD-LTS-GSALLTPAANPVISA 328 (457)
T ss_pred cCCEEEEechhhccCcCchHHHHHhcCCCCCEEE--echhhcC-CCcc-eeEEehHHHHh-hcC-CCcccCCCcCHHHHH
Confidence 99999999999655311 1223467777 8999995 5667 88888888877 221 111122333333333
Q ss_pred HHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC------HHH
Q 013210 288 VAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET------EEK 361 (447)
Q Consensus 288 ~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~------~~~ 361 (447)
++.+.+..++. ....++..+..++|.+.|+++..+...++ +..|.|.++.+++.. .+.
T Consensus 329 aa~a~l~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~~---------------~VrG~Gl~~gve~~~~~~~~~~~~ 392 (457)
T PRK05639 329 AAEATLEIIEE-ENLLKNALKVGEFIKKRLLEMKESFEVIG---------------DVRGKGLMIGVEIVKENGKPDPEL 392 (457)
T ss_pred HHHHHHHHHHH-ccHHHHHHHHHHHHHHHHHHHHHhCCCEE---------------eeccceeEEEEEEecCCCCCCHHH
Confidence 33333322211 12345555666777777765311100001 223788999999842 223
Q ss_pred HHHHHHHhhc
Q 013210 362 ANRLMNYLQN 371 (447)
Q Consensus 362 ~~~l~~~l~~ 371 (447)
+..+...+..
T Consensus 393 ~~~~~~~~~~ 402 (457)
T PRK05639 393 TGKICWRAFE 402 (457)
T ss_pred HHHHHHHHHh
Confidence 4556666654
No 314
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.71 E-value=1.5e-15 Score=152.48 Aligned_cols=290 Identities=12% Similarity=0.151 Sum_probs=175.6
Q ss_pred CCCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcC------C-CCeEEEeCCCchhHHHHHHhhcC------
Q 013210 96 HFNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLCS------S-GGHVVAARTLYGGTHALLTHFFP------ 160 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~~------~-gd~Vi~~~~~y~~~~~~~~~~~~------ 160 (447)
..++...++.++|+++.+ .+.++|++||+||+..|++.... . ..+||.....||+..........
T Consensus 83 ~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~ 162 (428)
T PRK07986 83 ITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMH 162 (428)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhh
Confidence 356667788889988874 36799999999999999985432 2 35899999999875422211000
Q ss_pred cccC---eeEEEeC-----------CCCHHHHHHhhcc--CCceEEEEEcC-CCCCccccC----HHHHHHHHHhcCCEE
Q 013210 161 RACN---ITTTFVD-----------ISDHEMVNSAIVQ--GRTKVLYFESI-SNPTLAVAN----IPELSRLAHDKGVTV 219 (447)
Q Consensus 161 ~~~g---~~~~~v~-----------~~d~~~l~~~i~~--~~t~lV~i~~~-~NptG~v~~----l~~I~~la~~~gi~l 219 (447)
...+ ..+.+++ ..|++++++.++. +++.+|++|.+ +...|.+.+ +++|.++|++||+++
T Consensus 163 ~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lL 242 (428)
T PRK07986 163 SLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILL 242 (428)
T ss_pred hccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 0000 0112222 1256677777732 46789999995 666676542 889999999999999
Q ss_pred EEeCCCCCCCC-------CccCCCCeEEEeCCCccccCCC-CeeEEEEEcChHHHHHHHHHh----hhhhhhcCCCccHH
Q 013210 220 VVDNTFSPLVL-------SPARLGADVVVHSISKFISGGA-DIIAGAVCGPANLVNSMMDLH----QGALMLLGPTMNPK 287 (447)
Q Consensus 220 ivD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g-~~igG~l~~~~~~~~~l~~~~----~~~~~~~g~~~~~~ 287 (447)
|+||+++++.. .-.....|+++ ++|.+++ | ..+ |++++++++.+.+.... ....+..|+++...
T Consensus 243 I~DEv~tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~g-G~~p~-~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~a 318 (428)
T PRK07986 243 IADEIATGFGRTGKLFACEHAGIAPDILC--LGKALTG-GTMTL-SATLTTREVAETISNGEAGCFMHGPTFMGNPLACA 318 (428)
T ss_pred EEeccccCCccCCCeeeecccCCCCCEEE--echhhhC-CcccC-cchhchHHHHHHhhcCCCCccccCCCCCcCHHHHH
Confidence 99999965521 11122356665 8999984 5 466 77788888888775421 01122334433333
Q ss_pred HHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHH
Q 013210 288 VAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMN 367 (447)
Q Consensus 288 ~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~ 367 (447)
++.+.+..++. ....++..++.++|.+.|++... +|.+. +..|.|.++.+++.....+..+..
T Consensus 319 aa~a~L~~i~~-~~~~~~~~~~g~~l~~~l~~l~~---~~~i~-------------~vRg~Gl~~~ve~~~~~~~~~~~~ 381 (428)
T PRK07986 319 VANASLSLLES-GDWQQQVAAIEAQLREELAPLRD---APMVA-------------DVRVLGAIGVVETTRPVNMAALQR 381 (428)
T ss_pred HHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHhc---CCCEE-------------eEeccceEEEEEeCCcccHHHHHH
Confidence 33333333221 12456667777778887776421 12111 223678899999975433556777
Q ss_pred HhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 368 YLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 368 ~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
.+.. .|+ .+... .+.|||+.. ..-+++.++.+.++|++.
T Consensus 382 ~l~~---~Gl-~~~~~----------------------------g~~i~~~Pp-l~it~~ei~~~~~~l~~~ 420 (428)
T PRK07986 382 FFVE---QGV-WIRPF----------------------------GKLIYLMPP-YIILPEQLQRLTAAVNRA 420 (428)
T ss_pred HHHH---CCc-EEEec----------------------------CCEEEEeCC-CCCCHHHHHHHHHHHHHH
Confidence 7765 232 21110 146788777 655566666666665544
No 315
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.71 E-value=7.4e-15 Score=144.97 Aligned_cols=222 Identities=14% Similarity=0.053 Sum_probs=147.6
Q ss_pred CCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHH-HHhhcCcccCeeEEEeC----
Q 013210 97 FNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHAL-LTHFFPRACNITTTFVD---- 171 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~-~~~~~~~~~g~~~~~v~---- 171 (447)
+++++.++|+.+++++|.+.+++|++||.|+++++...+++||.| +...|..+... +. ..|....-++
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~-----~~Ga~fvDi~~d~a 148 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQE-----LNGGIFVDIIIDEA 148 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHH-----hCCcEEEeeecccc
Confidence 567889999999999999999999999999998766567899954 44444433333 31 1344322221
Q ss_pred -------C----CCHHHHHHhhcc---CCceEEEEEcCCCCC-cccc---CHHHHHHHHHhcCCEEEEeCCC-CC---CC
Q 013210 172 -------I----SDHEMVNSAIVQ---GRTKVLYFESISNPT-LAVA---NIPELSRLAHDKGVTVVVDNTF-SP---LV 229 (447)
Q Consensus 172 -------~----~d~~~l~~~i~~---~~t~lV~i~~~~Npt-G~v~---~l~~I~~la~~~gi~livD~~~-~~---~~ 229 (447)
. .|+++|+++|.. +++++|.++.++|.. |... ++++|.++|++||+.+|.|.++ .+ |.
T Consensus 149 ~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI 228 (460)
T PRK13237 149 HDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFI 228 (460)
T ss_pred cccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhh
Confidence 1 189999999932 245678888888888 5665 6899999999999999999998 22 11
Q ss_pred ------CCccC---------CCCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhhhh-hhhcCCCccHHHHHHH
Q 013210 230 ------LSPAR---------LGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGA-LMLLGPTMNPKVAFEL 292 (447)
Q Consensus 230 ------~~~~~---------~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~-~~~~g~~~~~~~a~~~ 292 (447)
+.... ...|.+++|++|.++.+ +||+++. ++++.++++...--+ ++.+-..++.....++
T Consensus 229 ~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~---~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~al 305 (460)
T PRK13237 229 KEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVN---IGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAM 305 (460)
T ss_pred cccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCC---CceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHH
Confidence 11111 14799999999999975 4688755 678888887663210 1112222222111111
Q ss_pred HccCC-cHH-HHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 013210 293 SERIP-HLG-LRMKEHCHRALIFARRMKKLGLKVLYPG 328 (447)
Q Consensus 293 ~~~~~-~l~-~~~~~~~~~~~~l~~~L~~~~~~v~~p~ 328 (447)
..++. ... ...++.-+..++|.+.|.+.|..+..|.
T Consensus 306 Avgl~E~~~~~y~~~ri~~~~~l~~~L~~~Gvpv~~p~ 343 (460)
T PRK13237 306 AIGIEESVQYEYIEHRVGQVRYLGEKLLAAGVPIVEPV 343 (460)
T ss_pred HhHHHhhchHHHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence 11221 111 3445556778899999999998877764
No 316
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.71 E-value=2.6e-15 Score=150.65 Aligned_cols=289 Identities=13% Similarity=0.141 Sum_probs=174.2
Q ss_pred CCCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcC-------CC-CeEEEeCCCchhHHHHHHhhcC-----
Q 013210 96 HFNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHALLTHFFP----- 160 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~~-------~g-d~Vi~~~~~y~~~~~~~~~~~~----- 160 (447)
..++...++.++|+++.+ .+.++|++||+||+..|++.... ++ .+|+.....||+..........
T Consensus 80 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~ 159 (422)
T PRK05630 80 LTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGM 159 (422)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccc
Confidence 345666788889988864 46899999999999999975431 22 5799999999885433211100
Q ss_pred -cccC---eeEEEeCCC--------C----HHHHHHhhccCCceEEEEEcC-CCCCccccC----HHHHHHHHHhcCCEE
Q 013210 161 -RACN---ITTTFVDIS--------D----HEMVNSAIVQGRTKVLYFESI-SNPTLAVAN----IPELSRLAHDKGVTV 219 (447)
Q Consensus 161 -~~~g---~~~~~v~~~--------d----~~~l~~~i~~~~t~lV~i~~~-~NptG~v~~----l~~I~~la~~~gi~l 219 (447)
...+ ..+.+++.. + .+.+++.+ .+++.+|++|.+ +...|.+.+ +++|.++|++||+++
T Consensus 160 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~ll 238 (422)
T PRK05630 160 HSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLI-DETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILL 238 (422)
T ss_pred cccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHH-hhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 0000 011222211 1 23455555 468999999995 888887653 889999999999999
Q ss_pred EEeCCCCCCCCC-----c--cCCCCeEEEeCCCccccCCC-CeeEEEEEcChHHHHHHHHHh-----hhhhhhcCCCccH
Q 013210 220 VVDNTFSPLVLS-----P--ARLGADVVVHSISKFISGGA-DIIAGAVCGPANLVNSMMDLH-----QGALMLLGPTMNP 286 (447)
Q Consensus 220 ivD~~~~~~~~~-----~--~~~g~di~~~S~sK~~g~~g-~~igG~l~~~~~~~~~l~~~~-----~~~~~~~g~~~~~ 286 (447)
|+||+++++... . .....|++ +++|.+++ | ..+ |++++++++.+.+.... ....+..|++...
T Consensus 239 I~DEv~tG~GrtG~~~a~~~~gv~PDi~--t~gK~l~g-G~~p~-~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~ 314 (422)
T PRK05630 239 IADEIATGFGRTGELFATLAAGVTPDIM--CVGKALTG-GFMSF-AATLCTDKVAQLISTPNGGGALMHGPTFMANPLAC 314 (422)
T ss_pred EEecceeCCCcCchhhHHHhcCCCCCee--eeechhhc-Ccccc-ceeeccHHHHHHHhccCCCCccccCCCCcCCHHHH
Confidence 999999665321 1 12235666 58999974 4 345 88888989888774210 1112233443333
Q ss_pred HHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHH
Q 013210 287 KVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLM 366 (447)
Q Consensus 287 ~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~ 366 (447)
.++.+.+..++.. ...++..++.++|.+.|++.. + +|.+. +..|.|.++.+++.+...+..+.
T Consensus 315 aaa~aaL~~l~~~-~~~~~~~~~g~~l~~~L~~l~-~--~~~v~-------------~vRg~Gl~~~ie~~~~~~~~~~~ 377 (422)
T PRK05630 315 AVAHASLEIIETG-MWRKQVKRIEAELIAGLSPLA-H--LPGVA-------------DVRVLGAIGVVEMEQPVDMEEAT 377 (422)
T ss_pred HHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHhh-c--CCCee-------------eeeccccEEEEEECCcccHHHHH
Confidence 3333333333221 234566666777777776431 1 22211 22378999999997543345666
Q ss_pred HHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 367 NYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 367 ~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
..+.. .|++. .. . .+.|||... ..-++++++.+.++|++.
T Consensus 378 ~~~~~---~Gl~~-~~-------------------------~---g~~l~~~Pp-L~it~~~i~~~~~~l~~a 417 (422)
T PRK05630 378 QAAVD---HGVWL-RP-------------------------F---GRLVYVMPP-YITTSEQIAQICAALAAA 417 (422)
T ss_pred HHHHH---CCeEE-Ee-------------------------c---CCEEEEECC-ccCCHHHHHHHHHHHHHH
Confidence 66664 23221 10 0 146788887 666666666666666544
No 317
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.71 E-value=2.4e-15 Score=162.59 Aligned_cols=274 Identities=18% Similarity=0.182 Sum_probs=189.1
Q ss_pred hHHHHHHHHHHHhCCCe--EEEeCChHHHHHHHHHHh-cCC--CCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCC
Q 013210 100 TVLNLSRQMAALEGTEA--AYCTASGMSAISSVLMQL-CSS--GGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISD 174 (447)
Q Consensus 100 ~~~~l~~~ia~l~g~~~--~~~tsggt~A~~~al~~l-~~~--gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d 174 (447)
.+.+++..++++.|.+. +-++.++|++.+.+++++ .++ +++|++++.+|+.+...++..... .|++++.++.++
T Consensus 122 al~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~-~G~ev~~~~~~~ 200 (954)
T PRK05367 122 ALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEP-LGIEVVVGDAAK 200 (954)
T ss_pred HHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHh-CCCEEEEecCcc
Confidence 34678899999999864 789999999999888776 344 389999999999999888665555 799999988653
Q ss_pred HHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCcc-----
Q 013210 175 HEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKF----- 247 (447)
Q Consensus 175 ~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~----- 247 (447)
+ +..+++..+++.+| |.+|.+.|+++|+++||++|+++++|..+ ..+..+|.++|+|++++|.+||
T Consensus 201 --d----~~~~~~~~vlvq~p-~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g 273 (954)
T PRK05367 201 --A----LDHDDVFGVLLQYP-GTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMG 273 (954)
T ss_pred --C----CCcccEEEEEEecC-CCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCC
Confidence 1 21335666666665 67999999999999999999999999866 2334578889999999999999
Q ss_pred ccCCCCeeEEEEEcChHHHHHHHHHhhh---------------------hhhhcCC--CccHHH--HHH-----HHccCC
Q 013210 248 ISGGADIIAGAVCGPANLVNSMMDLHQG---------------------ALMLLGP--TMNPKV--AFE-----LSERIP 297 (447)
Q Consensus 248 ~g~~g~~igG~l~~~~~~~~~l~~~~~~---------------------~~~~~g~--~~~~~~--a~~-----~~~~~~ 297 (447)
+|||+ . |+++.++++...+....-+ ..+-.++ ....++ +.. ...+-.
T Consensus 274 ~GGP~--a-Gflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~ 350 (954)
T PRK05367 274 FGGPH--A-AYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPE 350 (954)
T ss_pred CCCCC--E-EEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhh
Confidence 78776 3 9999998877655211000 0001111 111111 111 111222
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccc
Q 013210 298 HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGF 377 (447)
Q Consensus 298 ~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~ 377 (447)
.+....++...++.++++.|+..+.++..+. ....+.|.++. ...++.++|... |+
T Consensus 351 Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~-------------------~f~~~~~~~~~--~~~~i~~~l~~~---gi 406 (954)
T PRK05367 351 GLKAIARRVHRLAAILAAGLRALGLEVVHDS-------------------FFDTLTVEVGG--DAAAVLARALAA---GI 406 (954)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCcccCCCC-------------------CCCeEEEeCCC--CHHHHHHHHHHC---Cc
Confidence 3444556677888899999977666554332 22377777652 356777777652 22
Q ss_pred ccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013210 378 MAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 437 (447)
Q Consensus 378 ~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 437 (447)
- .. -+.++.||+|+. ..+++++|+.|.++|.
T Consensus 407 -~--~~-------------------------~~~~~~l~is~~-e~~t~~did~l~~~l~ 437 (954)
T PRK05367 407 -N--LR-------------------------RVDDDHVGISLD-ETTTREDLAALLAVFG 437 (954)
T ss_pred -e--ec-------------------------cccCCEEEEEec-ccCCHHHHHHHHHHHc
Confidence 1 11 011467999999 9999999999999986
No 318
>PRK07036 hypothetical protein; Provisional
Probab=99.71 E-value=1.3e-15 Score=154.76 Aligned_cols=241 Identities=13% Similarity=0.177 Sum_probs=149.6
Q ss_pred CCCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcC-------C-CCeEEEeCCCchhHHHHHHhhcCc----
Q 013210 96 HFNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLCS-------S-GGHVVAARTLYGGTHALLTHFFPR---- 161 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~~-------~-gd~Vi~~~~~y~~~~~~~~~~~~~---- 161 (447)
..++...++.++|+++.. .+.++|++||+||+..|++.... + ..+|+.....||+........-..
T Consensus 92 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~ 171 (466)
T PRK07036 92 MTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADR 171 (466)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCccc
Confidence 345666788888888764 46799999999999999985421 2 257888888898865332111000
Q ss_pred -cc---CeeEEEeCCCC-----------------HHHHHHhhc---cCCceEEEEEcCCCCCccccC----HHHHHHHHH
Q 013210 162 -AC---NITTTFVDISD-----------------HEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPELSRLAH 213 (447)
Q Consensus 162 -~~---g~~~~~v~~~d-----------------~~~l~~~i~---~~~t~lV~i~~~~NptG~v~~----l~~I~~la~ 213 (447)
.+ ...+.+++..+ ++.+++.+. .+++.+|++|.+....|.+.| +++|.++|+
T Consensus 172 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~ 251 (466)
T PRK07036 172 TEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICR 251 (466)
T ss_pred ccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHH
Confidence 00 01122222111 234455442 256899999999999999876 899999999
Q ss_pred hcCCEEEEeCCCCCCCC-----Ccc---CCCCeEEEeCCCccccCCC-CeeEEEEEcChHHHHHHHHH------hhhhhh
Q 013210 214 DKGVTVVVDNTFSPLVL-----SPA---RLGADVVVHSISKFISGGA-DIIAGAVCGPANLVNSMMDL------HQGALM 278 (447)
Q Consensus 214 ~~gi~livD~~~~~~~~-----~~~---~~g~di~~~S~sK~~g~~g-~~igG~l~~~~~~~~~l~~~------~~~~~~ 278 (447)
+||+++|+||+++++.. ... ....|+++ ++|.+++ | .++ |++++++++.+.+... .....+
T Consensus 252 ~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt--~gK~l~g-G~~Pi-~av~~~~~i~~~~~~~~~~~~~~~~~~T 327 (466)
T PRK07036 252 RYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIIT--FAKGLTS-GYQPL-GAVIISERLLDVISGPNAKGNVFTHGFT 327 (466)
T ss_pred HcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEE--Ecccccc-Ccccc-EEEEEcHHHHHHHhcccCcCcccccCCC
Confidence 99999999999966521 111 22356665 8999985 5 367 7777888988876531 011123
Q ss_pred hcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 279 LLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 279 ~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
..|++++..++.+.+..++. ....++..+..++|.+.|++.. + +|... +..|.|.++.++|.
T Consensus 328 ~~gnpl~~aaa~a~Le~i~~-~~l~~~~~~~g~~l~~~L~~l~-~--~~~v~-------------~vrG~Gl~~~ve~~ 389 (466)
T PRK07036 328 YSGHPVACAAALKNIEIMER-EGLCEHVREVGPYFEERLASLR-E--LPLVG-------------DVRGDHLMACVECV 389 (466)
T ss_pred CCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHhc-c--CCCEE-------------EEEeeceEEEEEEc
Confidence 34444444444444333321 1244566677777777776531 1 12110 22378899999995
No 319
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.71 E-value=2.1e-15 Score=152.59 Aligned_cols=240 Identities=12% Similarity=0.093 Sum_probs=146.1
Q ss_pred CCCchHHHHHHHHHHHhCC----Ce-EEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhcCc---ccC-
Q 013210 96 HFNPTVLNLSRQMAALEGT----EA-AYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPR---ACN- 164 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g~----~~-~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~---~~g- 164 (447)
..++...++.++|+++... .. +++++||+||+..|++... ....+|+.....||+........... ..+
T Consensus 79 ~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~ 158 (442)
T TIGR00709 79 LTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAV 158 (442)
T ss_pred cCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccC
Confidence 4466667888899888642 24 4556999999999998543 22357999999998876444221110 000
Q ss_pred ----eeEEEeCCCC-------------H----HHHHHhhc-----cCCceEEEEEcCCCCCccccC----HHHHHHHHHh
Q 013210 165 ----ITTTFVDISD-------------H----EMVNSAIV-----QGRTKVLYFESISNPTLAVAN----IPELSRLAHD 214 (447)
Q Consensus 165 ----~~~~~v~~~d-------------~----~~l~~~i~-----~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~ 214 (447)
..+.+++..+ . +.+++.+. .+++.+|++|+++++.|.+.+ +++|.++|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~ 238 (442)
T TIGR00709 159 GMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRK 238 (442)
T ss_pred CCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 1122232211 1 12333331 146889999999888887753 8899999999
Q ss_pred cCCEEEEeCCCCCCCCCc-------cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHH
Q 013210 215 KGVTVVVDNTFSPLVLSP-------ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPK 287 (447)
Q Consensus 215 ~gi~livD~~~~~~~~~~-------~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~ 287 (447)
||+++|+||+|+++.... .....|+++ ++|.+++ |.++ |+++.+++ ++.+..... ..+..|++++..
T Consensus 239 ~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~~-G~Pi-gav~~~~~-~~~~~~~~~-~~T~~gnpla~a 312 (442)
T TIGR00709 239 HDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV--MSKAVGG-GLPL-AVLLIAPE-FDAWQPAGH-TGTFRGNQLAMV 312 (442)
T ss_pred cCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--EcccccC-Cccc-EEEEEchH-HhccCCCcC-CCCCCcCHHHHH
Confidence 999999999997664211 122357776 8999997 7999 77777766 444422111 223445555555
Q ss_pred HHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 288 VAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 288 ~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
++.+.+..++. ....++..++.++|.+.|+++..+ +|... +..|.|.++.+++.
T Consensus 313 aa~a~L~~i~~-~~l~~~~~~~g~~l~~~L~~l~~~--~~~v~-------------~vrG~Gl~~~ie~~ 366 (442)
T TIGR00709 313 TGTEALNYWKD-DNLAQNAQERGERITSFLDDMIKE--HPCIG-------------NVRGRGLMQGIMIV 366 (442)
T ss_pred HHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHh--CCCee-------------eeeccceEEEEEEc
Confidence 55554433221 123455666777777777653211 11100 22378999999995
No 320
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.70 E-value=1.7e-15 Score=152.18 Aligned_cols=253 Identities=11% Similarity=0.122 Sum_probs=157.2
Q ss_pred CCCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcC-------CC-CeEEEeCCCchhHH-HHHHh-------
Q 013210 96 HFNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTH-ALLTH------- 157 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~~-------~g-d~Vi~~~~~y~~~~-~~~~~------- 157 (447)
..++...++.++|+++.. .+.++|++||++|+..|++.... +| .+|+.....||+.. ..+..
T Consensus 84 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~ 163 (429)
T PRK06173 84 FTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGM 163 (429)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhh
Confidence 345666788888888864 46799999999999999975431 23 57999999998842 22110
Q ss_pred ---hcCcccCeeEEEeCCC-----------CHHHHHHhhc--cCCceEEEEEcC-CCCCccccC----HHHHHHHHHhcC
Q 013210 158 ---FFPRACNITTTFVDIS-----------DHEMVNSAIV--QGRTKVLYFESI-SNPTLAVAN----IPELSRLAHDKG 216 (447)
Q Consensus 158 ---~~~~~~g~~~~~v~~~-----------d~~~l~~~i~--~~~t~lV~i~~~-~NptG~v~~----l~~I~~la~~~g 216 (447)
+.+. . ..+.+++.. +++.|++.++ .+++.+|++|.+ +...|.+.+ +++|.++|++||
T Consensus 164 ~~~~~~~-~-~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g 241 (429)
T PRK06173 164 HGLFNHS-L-PVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYG 241 (429)
T ss_pred hhccccc-C-CCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcC
Confidence 0000 0 012223221 3566777773 257899999996 888887753 889999999999
Q ss_pred CEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCccccCCC-CeeEEEEEcChHHHHHHHHHh----hhhhhhcCCCc
Q 013210 217 VTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGA-DIIAGAVCGPANLVNSMMDLH----QGALMLLGPTM 284 (447)
Q Consensus 217 i~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g-~~igG~l~~~~~~~~~l~~~~----~~~~~~~g~~~ 284 (447)
+++|+||+++++... -.....|+++ ++|.+++ | ..+ +.++.++++.+.+.... ....+..++++
T Consensus 242 ~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~g-G~~p~-~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~ 317 (429)
T PRK06173 242 VLLIFDEIATGFGRTGKLFALEHAGVVPDIMC--IGKALTG-GYLTL-SATITTEAIAQTICSGEAKCFMHGPTFMANPL 317 (429)
T ss_pred CeEEecchhcCCCcCCcchHHHhcCCCCCEEE--eehhhhC-Ccccc-ceEEecHHHHHHHhcCCCCccccCCCCCcCHH
Confidence 999999999655221 1122456666 8999974 5 355 77788888887764311 11111233333
Q ss_pred cHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHH
Q 013210 285 NPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANR 364 (447)
Q Consensus 285 ~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~ 364 (447)
...++.+.++.++.. ...++..++.++|.+.|++... +|.+. +..|.|.++.+++.....+..
T Consensus 318 ~~aaa~a~l~~i~~~-~~~~~~~~~g~~l~~~L~~~~~---~~~v~-------------~vRg~Gl~~~iel~~~~~~~~ 380 (429)
T PRK06173 318 ACAIAAESIRLLLES-PWQQNIQRIEAQLKQELAPAAE---FDSVA-------------EVRVLGAIGVVEMKEPVNMAT 380 (429)
T ss_pred HHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHhhc---CCCee-------------eeeccceEEEEEeCCcccHHH
Confidence 333333333322211 2356667777888888875411 11111 112678899999985544566
Q ss_pred HHHHhhc
Q 013210 365 LMNYLQN 371 (447)
Q Consensus 365 l~~~l~~ 371 (447)
+.+.|..
T Consensus 381 i~~~l~e 387 (429)
T PRK06173 381 LQPRFVE 387 (429)
T ss_pred HHHHHHH
Confidence 7777765
No 321
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.70 E-value=2.2e-15 Score=162.83 Aligned_cols=292 Identities=17% Similarity=0.214 Sum_probs=184.7
Q ss_pred chHHHHHHHHHHHhCCCeEEEeC-ChHHHHHHHHHHhc----CCCC----eEEEeCCCchhHHHHHHhhcCcccCeeEEE
Q 013210 99 PTVLNLSRQMAALEGTEAAYCTA-SGMSAISSVLMQLC----SSGG----HVVAARTLYGGTHALLTHFFPRACNITTTF 169 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~~~~~ts-ggt~A~~~al~~l~----~~gd----~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~ 169 (447)
....++++.++++.|.+.+.+.+ +|+.|+.++++++. ++|+ .|+++...|++....+. ..|++++.
T Consensus 542 ~~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~-----~~G~~vv~ 616 (954)
T PRK05367 542 ELIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAV-----MAGMKVVV 616 (954)
T ss_pred HHHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHH-----HCCCEEEE
Confidence 45678999999999998876665 56666655554432 4454 59999999988876662 36889998
Q ss_pred eCCC-----CHHHHHHhhcc--CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCC-C-CC-CCccCCCCeE
Q 013210 170 VDIS-----DHEMVNSAIVQ--GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-P-LV-LSPARLGADV 239 (447)
Q Consensus 170 v~~~-----d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~-~~-~~~~~~g~di 239 (447)
++.+ |+++|++++.. .++.+|++.+|++-.+...|+++|+++||++|+++++|.++. . +. ..+.++|+|+
T Consensus 617 v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi 696 (954)
T PRK05367 617 VACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADV 696 (954)
T ss_pred ECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCE
Confidence 8764 89999998833 246778888887764345789999999999999999999992 2 22 3466789999
Q ss_pred EEeCCCcccc------CCCCeeEEEEEcChHHHHHHHHHhhhh-hh--hcCCCc-cHH-------HHHHHH--ccCCcHH
Q 013210 240 VVHSISKFIS------GGADIIAGAVCGPANLVNSMMDLHQGA-LM--LLGPTM-NPK-------VAFELS--ERIPHLG 300 (447)
Q Consensus 240 ~~~S~sK~~g------~~g~~igG~l~~~~~~~~~l~~~~~~~-~~--~~g~~~-~~~-------~a~~~~--~~~~~l~ 300 (447)
++.|+||+|+ +|| + |+++.++.+...+-....+. .. ..|... +.. .++..+ .+.+.+.
T Consensus 697 ~~~s~HK~f~~P~G~GGPg--~-G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr 773 (954)
T PRK05367 697 SHLNLHKTFCIPHGGGGPG--V-GPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLR 773 (954)
T ss_pred EEecCcccCCCCcCCCCCc--e-EEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHH
Confidence 9999999964 344 3 78877655443332211000 00 011111 111 122222 2334455
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE-eCC--HHHHHHHHHHhhccccccc
Q 013210 301 LRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD-MET--EEKANRLMNYLQNYAQFGF 377 (447)
Q Consensus 301 ~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~-l~~--~~~~~~l~~~l~~~~~~g~ 377 (447)
+..+....+++++.+.|++. +++.+++-.... -...++.+. ++. ...+..+.++|.. +|+
T Consensus 774 ~~a~~~~~~A~Yl~~~L~~~-~~~~~~~~~~~~-------------~~e~i~~~~~~~~~~g~~~~di~krL~d---~G~ 836 (954)
T PRK05367 774 QATEVAILNANYIAKRLKDH-YPVLYTGANGRV-------------AHECILDLRPLKESTGITVDDIAKRLID---YGF 836 (954)
T ss_pred HHHHHHHHHHHHHHHHHHhh-cCccccCCCCCc-------------ccceEEEeecccccCCCCHHHHHHHHHH---CCC
Confidence 56666678999999999763 344333211000 012355552 331 1235678888865 443
Q ss_pred ccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013210 378 MAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 378 ~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 441 (447)
.+.... .| + .+.+||++. ..++.++++.|.+++..+.+
T Consensus 837 ~~~t~~-------~p-----------------v-~~~l~i~pt-E~~s~~elDr~~~al~~i~~ 874 (954)
T PRK05367 837 HAPTMS-------FP-----------------V-AGTLMVEPT-ESESKAELDRFCDAMIAIRA 874 (954)
T ss_pred eEeecC-------Cc-----------------c-CCEEEEEee-ecCCHHHHHHHHHHHHHHHH
Confidence 221100 01 1 477999999 88888889999988877653
No 322
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.70 E-value=1.1e-14 Score=148.69 Aligned_cols=204 Identities=15% Similarity=0.127 Sum_probs=135.3
Q ss_pred EEEeCChHHHHHHHHHHhcC--------------------------CCCeEEEeCCCchhHHHHHHhhcCcccCe---eE
Q 013210 117 AYCTASGMSAISSVLMQLCS--------------------------SGGHVVAARTLYGGTHALLTHFFPRACNI---TT 167 (447)
Q Consensus 117 ~~~tsggt~A~~~al~~l~~--------------------------~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~---~~ 167 (447)
.+||+|||+||..++..... ++..|++++.+|.++...+. . .|+ ++
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~-~----lglg~~~v 236 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAAD-V----LGIGRDNL 236 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHH-H----cCCCcccE
Confidence 68999999999998865321 12468899999999887763 2 333 56
Q ss_pred EEeCCC-----CHHHHHHhhcc---CCceEEEEE--cCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCC-CCc----
Q 013210 168 TFVDIS-----DHEMVNSAIVQ---GRTKVLYFE--SISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLV-LSP---- 232 (447)
Q Consensus 168 ~~v~~~-----d~~~l~~~i~~---~~t~lV~i~--~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~-~~~---- 232 (447)
+.++.+ |+++|+++++. .+++.+++. ..++.+|.+.|+++|+++|+++|+++|+|++|++.. ..+
T Consensus 237 ~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~ 316 (522)
T TIGR03799 237 IAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRH 316 (522)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHH
Confidence 666654 89999998831 455555554 557799999999999999999999999999995432 222
Q ss_pred --cCC-CCeEEEeCCCccccCCCCeeEEEEEc-ChHHHHHHHHHhh-----hh-----hhhcCCCcc-HHHHHHHHccC-
Q 013210 233 --ARL-GADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQ-----GA-----LMLLGPTMN-PKVAFELSERI- 296 (447)
Q Consensus 233 --~~~-g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~-----~~-----~~~~g~~~~-~~~a~~~~~~~- 296 (447)
..+ ++|.++.|.||++++|-. + |+++. +++..+.+..... +. ....++... ....+..++.+
T Consensus 317 ~l~gle~aDSit~d~HK~l~~P~g-~-G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG 394 (522)
T TIGR03799 317 LLKGIERADSVTIDAHKQLYVPMG-A-GMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIG 394 (522)
T ss_pred HhcCchhCCEEEEChhhcCCcCcc-c-EEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHh
Confidence 223 689999999996655543 3 66654 5555554432100 00 011122222 22234444433
Q ss_pred -CcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCC
Q 013210 297 -PHLGLRMKEHCHRALIFARRMKKLGL-KVLYP 327 (447)
Q Consensus 297 -~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p 327 (447)
..+...+++..++++++.+.|++.+. ++..|
T Consensus 395 ~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~ 427 (522)
T TIGR03799 395 RKGYELLIDQSIEKAKYFADLIQQQPDFELVTE 427 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecC
Confidence 34667778889999999999988754 66554
No 323
>PLN02590 probable tyrosine decarboxylase
Probab=99.70 E-value=2.3e-14 Score=146.30 Aligned_cols=290 Identities=14% Similarity=0.148 Sum_probs=177.4
Q ss_pred CCchHHHHHH----HHHHHhCCCe---------EEEeCChHHHHHHHHHHhcCC-----C-----C-eEEEeCCCchhHH
Q 013210 97 FNPTVLNLSR----QMAALEGTEA---------AYCTASGMSAISSVLMQLCSS-----G-----G-HVVAARTLYGGTH 152 (447)
Q Consensus 97 ~~~~~~~l~~----~ia~l~g~~~---------~~~tsggt~A~~~al~~l~~~-----g-----d-~Vi~~~~~y~~~~ 152 (447)
..|...++|+ .+++++|.++ .+||+|||+|+..++.+.... | + .|.+++..|.++.
T Consensus 164 ~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~ 243 (539)
T PLN02590 164 TSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFR 243 (539)
T ss_pred cCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHH
Confidence 3444445554 4566666542 689999999999888654220 1 2 4556788888887
Q ss_pred HHHHhhcCcccCe---eEEEeCCC-------CHHHHHHhhccC-----CceEEEEEcCCCCCccccCHHHHHHHHHhcCC
Q 013210 153 ALLTHFFPRACNI---TTTFVDIS-------DHEMVNSAIVQG-----RTKVLYFESISNPTLAVANIPELSRLAHDKGV 217 (447)
Q Consensus 153 ~~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~-----~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi 217 (447)
..+. + .|+ .++.|+.+ |+++|+++|++. .+-+|+.+..+..+|.+-|+++|+++|++||+
T Consensus 244 KAa~-i----lGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~ 318 (539)
T PLN02590 244 KACL-I----GGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGI 318 (539)
T ss_pred HHHH-H----cCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCC
Confidence 7763 2 333 34444443 889999988321 24466667778889999999999999999999
Q ss_pred EEEEeCCCCCCC-CCcc------CC-CCeEEEeCCCccccCCCCeeEEEEEc-ChH-HHHHHHH---Hh-hh--------
Q 013210 218 TVVVDNTFSPLV-LSPA------RL-GADVVVHSISKFISGGADIIAGAVCG-PAN-LVNSMMD---LH-QG-------- 275 (447)
Q Consensus 218 ~livD~~~~~~~-~~~~------~~-g~di~~~S~sK~~g~~g~~igG~l~~-~~~-~~~~l~~---~~-~~-------- 275 (447)
++|||++|++.. ..+. .+ .+|-++.++||++..|-. . |++.. ++. +.+.+.. +. ..
T Consensus 319 WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~-c-g~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~ 396 (539)
T PLN02590 319 WLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQT-C-SPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVV 396 (539)
T ss_pred eEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcC-E-EEEEecCHHHHHHHhhcCHHHhCCcccccccCC
Confidence 999999995543 3221 11 479999999999997765 3 55544 432 2232211 11 00
Q ss_pred ----hhhhcCCCccHHHHHHHHcc--CCcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCc
Q 013210 276 ----ALMLLGPTMNPKVAFELSER--IPHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGF 348 (447)
Q Consensus 276 ----~~~~~g~~~~~~~a~~~~~~--~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~ 348 (447)
.....+-.......|..++. .+.+.+.+++..++++++.+.|++.+. ++..|. .
T Consensus 397 d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~--~----------------- 457 (539)
T PLN02590 397 NYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTR--Y----------------- 457 (539)
T ss_pred CccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--c-----------------
Confidence 00111112233444554443 355778889999999999999988754 665442 1
Q ss_pred CcEEEEEeCC----HH----HHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeC
Q 013210 349 GGLLCLDMET----EE----KANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVG 420 (447)
Q Consensus 349 g~~~~~~l~~----~~----~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g 420 (447)
-++++|.+.. .+ ...++.+++...+ .+.++ ++.. -..-.+|++++
T Consensus 458 l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G---~~~vs----------~t~~--------------~g~~~lR~~i~ 510 (539)
T PLN02590 458 FSLVCFRLAPVDGDEDQCNERNRELLAAVNSTG---KIFIS----------HTAL--------------SGKFVLRFAVG 510 (539)
T ss_pred eEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCC---CEEEE----------eeEE--------------CCEEEEEEEec
Confidence 1288888752 11 1234555554321 11111 1110 01247999998
Q ss_pred CCCCHHHHHHHHHHHHHHh
Q 013210 421 YLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 421 ~~~~~~~~i~~l~~al~~~ 439 (447)
-..++++.++.+.+.|.+.
T Consensus 511 n~~T~~~dv~~~~~~i~~~ 529 (539)
T PLN02590 511 APLTEEKHVTEAWQIIQKH 529 (539)
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 4566677777766666554
No 324
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.70 E-value=3.8e-15 Score=150.77 Aligned_cols=253 Identities=16% Similarity=0.176 Sum_probs=158.2
Q ss_pred CCCchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhc-------CC-CCeEEEeCCCchhHHHHHHh--------
Q 013210 96 HFNPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLC-------SS-GGHVVAARTLYGGTHALLTH-------- 157 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~-------~~-gd~Vi~~~~~y~~~~~~~~~-------- 157 (447)
..++...++.++|+++.+. +.++|++||++|+..|++... .+ ..+||.....||+.......
T Consensus 94 ~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~ 173 (453)
T PRK06943 94 CTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFK 173 (453)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhh
Confidence 3456667888888888764 479999999999999998652 12 35799999999886522210
Q ss_pred --hcCcccCeeEEEeCCC-----------------CHHHHHHhhc--cCCceEEEEEc-CCCCCccccC----HHHHHHH
Q 013210 158 --FFPRACNITTTFVDIS-----------------DHEMVNSAIV--QGRTKVLYFES-ISNPTLAVAN----IPELSRL 211 (447)
Q Consensus 158 --~~~~~~g~~~~~v~~~-----------------d~~~l~~~i~--~~~t~lV~i~~-~~NptG~v~~----l~~I~~l 211 (447)
+.+...+ +.+++.. +++++++.+. .+++.+|++|. ++...|.+.+ +++|.++
T Consensus 174 ~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~l 251 (453)
T PRK06943 174 DAYDPLIRH--AHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRAL 251 (453)
T ss_pred cccccCCCC--CEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHH
Confidence 0110001 1222211 2467777773 25789999999 4888888764 8899999
Q ss_pred HHhcCCEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCccccCCC-CeeEEEEEcChHHHHHHHHHh-----hhhhh
Q 013210 212 AHDKGVTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGA-DIIAGAVCGPANLVNSMMDLH-----QGALM 278 (447)
Q Consensus 212 a~~~gi~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g-~~igG~l~~~~~~~~~l~~~~-----~~~~~ 278 (447)
|++||+++|+||+++++... -.....|+++ ++|.+++ | .++ |++++++++.+.+.... ....+
T Consensus 252 c~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt--~gKgl~g-G~~Pi-~av~~~~ei~~~~~~~~~~~~~~~~~T 327 (453)
T PRK06943 252 CDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLC--LSKGISG-GYLPL-SLVLSRDAIFAAFYDDDVTRGFLHSHS 327 (453)
T ss_pred HHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEe--eehhhcc-Ccccc-eEEEEcHHHHHhhcccCccCCccCCCC
Confidence 99999999999999666321 1122456766 7999995 5 477 77888888887765211 11223
Q ss_pred hcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-
Q 013210 279 LLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME- 357 (447)
Q Consensus 279 ~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~- 357 (447)
..|+.++..++.+.+..++. ....++..+..++|.+.|+++. + +|.+. +..|.|.++.+++.
T Consensus 328 ~~gnpl~~aaa~a~L~~i~~-~~l~~~~~~~G~~l~~~L~~l~-~--~~~v~-------------~vrG~Gl~~gvel~~ 390 (453)
T PRK06943 328 YTGNPLACRAALATLDLFAE-DDVLARNARKSARLRAALAPLA-A--HPQVR-------------HLRQRGTIFAFDVAL 390 (453)
T ss_pred CCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHh-c--CCCEE-------------eEeccccEEEEEEcc
Confidence 44555544444444433321 1234556666777777776642 1 22221 12378899999996
Q ss_pred CH----HHHHHHHHHhhc
Q 013210 358 TE----EKANRLMNYLQN 371 (447)
Q Consensus 358 ~~----~~~~~l~~~l~~ 371 (447)
+. .....+...+..
T Consensus 391 ~~~~~~~~~~~i~~~~~~ 408 (453)
T PRK06943 391 DGDAARTFSRRFFEAALE 408 (453)
T ss_pred CCCcchHHHHHHHHHHHH
Confidence 21 123455555554
No 325
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.69 E-value=6.4e-15 Score=158.64 Aligned_cols=275 Identities=19% Similarity=0.167 Sum_probs=184.5
Q ss_pred hHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHh-cCCC--CeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCC
Q 013210 100 TVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQL-CSSG--GHVVAARTLYGGTHALLTHFFPRACNITTTFVDISD 174 (447)
Q Consensus 100 ~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l-~~~g--d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d 174 (447)
.+.+++..||++.|.+ ++-++.++|++.+++++++ +++| ++|++++.+|+++...++..... .|++++.++.++
T Consensus 149 al~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~-~GieV~~v~~~~ 227 (993)
T PLN02414 149 SLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADG-LGLEVVVADEKD 227 (993)
T ss_pred HHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhh-cCCEEEEecchh
Confidence 3578889999999985 4999999999999888776 3444 78999999999999998666555 799999987644
Q ss_pred HHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCC-CccCCCCeEEEeCCCccc---
Q 013210 175 HEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVL-SPARLGADVVVHSISKFI--- 248 (447)
Q Consensus 175 ~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~-~~~~~g~di~~~S~sK~~--- 248 (447)
.+ .. .+.+..+++..| |.+|.+.|+++|+++||++|+++++ .++ +-..+ +|.++|+|+++++.+||.
T Consensus 228 ~~----~~-~~~v~~vlvq~P-~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~ 300 (993)
T PLN02414 228 FD----YS-SGDVCGVLVQYP-ATDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPM 300 (993)
T ss_pred hc----cc-cCceEEEEEecC-CCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCC
Confidence 22 12 334545554444 4699999999999999999999999 554 22333 578899999999999998
Q ss_pred --cCCCCeeEEEEEcChHHHHHHHH-H-------------------hhhhhhh-cCCC-c-cHHH--HHH-----HHccC
Q 013210 249 --SGGADIIAGAVCGPANLVNSMMD-L-------------------HQGALML-LGPT-M-NPKV--AFE-----LSERI 296 (447)
Q Consensus 249 --g~~g~~igG~l~~~~~~~~~l~~-~-------------------~~~~~~~-~g~~-~-~~~~--a~~-----~~~~~ 296 (447)
|||. . |+++.++++...+-. + +.+..++ .+++ . +.++ +.+ ...+-
T Consensus 301 G~GGP~--a-Gflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~ 377 (993)
T PLN02414 301 GYGGPH--A-AFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGP 377 (993)
T ss_pred CCCCCC--e-eEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhcc
Confidence 4443 3 999988877553311 0 0000000 1111 1 0111 111 11111
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccc
Q 013210 297 PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFG 376 (447)
Q Consensus 297 ~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g 376 (447)
..+.+..++..+++.++++.|++.|.++..+. ....+.|.++.. ..+.++|...+
T Consensus 378 ~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~-------------------~f~~vt~~~~~~---~~v~~~L~~~g--- 432 (993)
T PLN02414 378 EGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLP-------------------FFDTVKVKCSDA---DAIADAAAKVG--- 432 (993)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhcCCccCCCC-------------------CcCeEEEecCCH---HHHHHHHHHCC---
Confidence 33445556678888999999987776554331 122788887632 56667776532
Q ss_pred cccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 377 FMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 377 ~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
| .++. +.++.||+|+. ..+++++|+.|.++|...
T Consensus 433 -I--~l~~-------------------------~~~~~lrvs~~-e~~T~edId~L~~~l~~~ 466 (993)
T PLN02414 433 -I--NLRV-------------------------VDANTVTVSFD-ETTTLEDVDKLFKVFAGG 466 (993)
T ss_pred -C--eeEE-------------------------ecCCeEEEEee-ccCCHHHHHHHHHHHccc
Confidence 2 2220 11356999999 999999999999999643
No 326
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.69 E-value=4e-15 Score=145.70 Aligned_cols=299 Identities=14% Similarity=0.191 Sum_probs=182.6
Q ss_pred cccCCCCchHHHHHHHHHHHhC---CCeEEEeCChHHHHHHHHHHhc-------CCC-CeEEEeCCCchhHHHH-HH---
Q 013210 92 IYSRHFNPTVLNLSRQMAALEG---TEAAYCTASGMSAISSVLMQLC-------SSG-GHVVAARTLYGGTHAL-LT--- 156 (447)
Q Consensus 92 ~~~r~~~~~~~~l~~~ia~l~g---~~~~~~tsggt~A~~~al~~l~-------~~g-d~Vi~~~~~y~~~~~~-~~--- 156 (447)
.++-...| ..+|.++|+++.+ -+.++|++||++|+..+++... ++. .++|.-...||+..-. +.
T Consensus 81 ~~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g 159 (449)
T COG0161 81 FGGFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGG 159 (449)
T ss_pred hcccCCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccC
Confidence 34445566 6889999999987 4679999999999999997543 122 3588888888764321 10
Q ss_pred ------hhcCcccCeeEEEeCCC-----------------CHHHHHHhhcc---CCceEEEEEcCCCC-CccccC----H
Q 013210 157 ------HFFPRACNITTTFVDIS-----------------DHEMVNSAIVQ---GRTKVLYFESISNP-TLAVAN----I 205 (447)
Q Consensus 157 ------~~~~~~~g~~~~~v~~~-----------------d~~~l~~~i~~---~~t~lV~i~~~~Np-tG~v~~----l 205 (447)
.+... .-..+.+++.. ..++|++.|.. +++.++++|.+..- .|.+.| +
T Consensus 160 ~~~~~~~~~~~-ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl 238 (449)
T COG0161 160 PVALRHAFYDP-LLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYL 238 (449)
T ss_pred chhhhhhhccc-cccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHH
Confidence 11100 00111122111 14566666643 56789999998877 777764 8
Q ss_pred HHHHHHHHhcCCEEEEeCCCCCCCC-----CccCCC--CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhh
Q 013210 206 PELSRLAHDKGVTVVVDNTFSPLVL-----SPARLG--ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALM 278 (447)
Q Consensus 206 ~~I~~la~~~gi~livD~~~~~~~~-----~~~~~g--~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~ 278 (447)
+++.++|++|||++|+||+.++|.. .....| .|+++ ++|.+.+.-.++ |+++.++++.+.+.... ...+
T Consensus 239 ~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~--~aKGLT~GY~Pl-~a~l~~~~I~~~~~~~~-~~~f 314 (449)
T COG0161 239 KRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILC--LAKGLTGGYLPL-SAVLTSDRIYEAFSDGD-AGAF 314 (449)
T ss_pred HHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeee--ecccccccchhh-HhHhhhHHHHHHHhccc-CCee
Confidence 8999999999999999999866642 222334 46666 889999777777 77777888888876531 1112
Q ss_pred hcCCCc--cHHHHHHHHccCCcHH--HHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013210 279 LLGPTM--NPKVAFELSERIPHLG--LRMKEHCHRALIFARRMKKL-GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLC 353 (447)
Q Consensus 279 ~~g~~~--~~~~a~~~~~~~~~l~--~~~~~~~~~~~~l~~~L~~~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 353 (447)
..|.+. .+.+++.++..++-+. ..+++..+...+|.+.|++. ... |... +..|.|.+..
T Consensus 315 ~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~---p~Vg-------------dVR~~Gli~~ 378 (449)
T COG0161 315 MHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADH---PLVG-------------DVRGLGLIGA 378 (449)
T ss_pred ccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccC---CcEE-------------EeeccceEEE
Confidence 223221 2334444333333222 23455567777777787762 110 1111 2336888999
Q ss_pred EEeCCHH---------HHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCC
Q 013210 354 LDMETEE---------KANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGT 424 (447)
Q Consensus 354 ~~l~~~~---------~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~ 424 (447)
+++.... ...++...+.. .|++.-.+|.. -.+.+|.+.+ .++
T Consensus 379 iElv~d~~t~~~f~~~~~~~~~~~~~e---~Gl~iRp~g~~-i~~~PPliit-------------------------~~e 429 (449)
T COG0161 379 IELVADKATKTPFEARVGARVRAAALE---RGLLIRPLGDV-IYLMPPLIIT-------------------------REE 429 (449)
T ss_pred EEEecccccccchhhhHHHHHHHHHHH---CCeEEeecCCE-EEEcCCccCC-------------------------HHH
Confidence 9986222 14455555544 45555455532 2334454443 678
Q ss_pred HHHHHHHHHHHHHHhhh
Q 013210 425 LDQRWSQFEKALSRMQD 441 (447)
Q Consensus 425 ~~~~i~~l~~al~~~~~ 441 (447)
++++++.+.++|+....
T Consensus 430 id~l~~~l~~al~~~~~ 446 (449)
T COG0161 430 IDELVDALREALDETLA 446 (449)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88889999988887643
No 327
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.69 E-value=1.9e-15 Score=138.58 Aligned_cols=254 Identities=17% Similarity=0.192 Sum_probs=173.2
Q ss_pred CchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhc------C--C-CC-eEEEeCCCchhH-H---------HHHHh
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLC------S--S-GG-HVVAARTLYGGT-H---------ALLTH 157 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~------~--~-gd-~Vi~~~~~y~~~-~---------~~~~~ 157 (447)
+...-++++.+++++|.+.++-+++|.||+..++.... + | .. .|+.....|++- . ..+..
T Consensus 100 nd~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~ 179 (427)
T KOG1402|consen 100 NDVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDG 179 (427)
T ss_pred hhhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhc
Confidence 44557899999999999999999999999999987543 1 2 22 344444445432 1 12233
Q ss_pred hcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCC--
Q 013210 158 FFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLS-- 231 (447)
Q Consensus 158 ~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~-- 231 (447)
+.+-.-| .+..++..|.++|+.++++++.+.+++|.++.+.|.+.| ++++.++|.+|++++|.||+|+++...
T Consensus 180 fgp~~P~-~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk 258 (427)
T KOG1402|consen 180 FGPFLPG-VVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGK 258 (427)
T ss_pred cCCCCCC-cceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCc
Confidence 4433122 366778889999999998889999999999999999976 899999999999999999999766432
Q ss_pred -----ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHH
Q 013210 232 -----PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEH 306 (447)
Q Consensus 232 -----~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~ 306 (447)
-.....|+++ +.|.++|.-.++ .++.++++++..+....+ +.+..|+++....+.+++.-+.+ ....++-
T Consensus 259 ~la~d~env~PDivi--lgKalSGG~~Pv-savl~~~~im~~~~pgeH-gsTyggNpLg~~vaiAalevi~e-ekL~era 333 (427)
T KOG1402|consen 259 LLACDYENVRPDIVI--LGKALSGGVYPV-SAVLADDDIMLNIKPGEH-GSTYGGNPLGCAVAIAALEVIVE-EKLVERA 333 (427)
T ss_pred EEEeehhhcCCCeEE--EeccccCCeeee-EEEEecHHHHhccCCCcc-ccccCCChHHHHHHHHHHHHHHH-HHHHHHH
Confidence 2233578888 889999776677 666778888877766554 44466676666666555443321 2233445
Q ss_pred HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC----CHHHHHHHHHHhhc
Q 013210 307 CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME----TEEKANRLMNYLQN 371 (447)
Q Consensus 307 ~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~----~~~~~~~l~~~l~~ 371 (447)
..+...|+..|++++.++ |.. .....|.|.+..+.+. +..++-.++-.+++
T Consensus 334 ~~lG~~l~~~L~~l~~~~--p~~------------v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~ 388 (427)
T KOG1402|consen 334 AKLGEILRDQLNKLQKKF--PHV------------VKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKE 388 (427)
T ss_pred HHHHHHHHHHHHhccccc--cch------------hheeeccceEEEEEeccccccchhHHHHHHcccc
Confidence 566667777787765432 111 1123377888888886 22334555555554
No 328
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.68 E-value=5.8e-15 Score=156.10 Aligned_cols=296 Identities=18% Similarity=0.183 Sum_probs=182.2
Q ss_pred chHHHHHHHHHHHhCCCeEEEeC-ChHHHHHHHHHHhcC-------C-CCeEEEeCCCchhHHHHHHhhcCcccCeeEEE
Q 013210 99 PTVLNLSRQMAALEGTEAAYCTA-SGMSAISSVLMQLCS-------S-GGHVVAARTLYGGTHALLTHFFPRACNITTTF 169 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~~~~~ts-ggt~A~~~al~~l~~-------~-gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~ 169 (447)
..+.++++.++++.|.+.+-+.+ +|+.+..++++++.. + .++|+++...|+.....+. ..|++++.
T Consensus 543 q~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~-----~~GieVv~ 617 (954)
T PRK12566 543 AMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQ-----MAGMRVVI 617 (954)
T ss_pred HHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHH-----HCCCEEEE
Confidence 45688999999999999887766 788888777776532 2 3578888988876655442 26899998
Q ss_pred eCCC-----CHHHHHHhhc--cCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCC-ccCCCCeE
Q 013210 170 VDIS-----DHEMVNSAIV--QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLS-PARLGADV 239 (447)
Q Consensus 170 v~~~-----d~~~l~~~i~--~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~-~~~~g~di 239 (447)
++.+ |+++|++.+. ++++++|.+.+|++-.+...|+++|+++||++|+++++|.++ +...+. |.++|+|+
T Consensus 618 Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi 697 (954)
T PRK12566 618 VECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADV 697 (954)
T ss_pred eccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCE
Confidence 8874 8999999983 267888888888877766678999999999999999999998 344444 67899999
Q ss_pred EEeCCCccccCCCC---eeEEEEEcChHHHHHHHHHh----hhhhhhcCCC-----cc---HHHHHHHHccCCc-HHHHH
Q 013210 240 VVHSISKFISGGAD---IIAGAVCGPANLVNSMMDLH----QGALMLLGPT-----MN---PKVAFELSERIPH-LGLRM 303 (447)
Q Consensus 240 ~~~S~sK~~g~~g~---~igG~l~~~~~~~~~l~~~~----~~~~~~~g~~-----~~---~~~a~~~~~~~~~-l~~~~ 303 (447)
+++++||++++|-. .-.|.+..++.+...+.... .+.....|.. .+ ...++..+..+-. +.+..
T Consensus 698 ~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~eLk~aa 777 (954)
T PRK12566 698 SHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQLADAS 777 (954)
T ss_pred EEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHHHHHHH
Confidence 99999999974311 11134344443333333221 0000001111 11 1122222222211 22222
Q ss_pred HHHHHHHHHHHHHHHhCCCeeeCCCCCCCc-hhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhhcccccccccc
Q 013210 304 KEHCHRALIFARRMKKLGLKVLYPGLEDHP-HHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQNYAQFGFMAV 380 (447)
Q Consensus 304 ~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p-~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~l~~~l~~~~~~g~~~v 380 (447)
..-..+++++++.|.+ +..+.+.+... + -| -..+..+.++. ......+.++|.. +|+.+.
T Consensus 778 ~~ailnAnYla~rL~~-~~~v~~~~~~~-~~~h------------Efii~~~~l~~~~g~~~~dvakRL~d---~Gihap 840 (954)
T PRK12566 778 EVAILSANYLANQLGG-AFPVLYRGRNE-RVAH------------ECILDLRPLKAQTGISEEDVAKRLMD---YGFHAP 840 (954)
T ss_pred HHHHHHHHHHHHHhHh-hCCCCcCCCCC-Ceee------------EEEEEccccccccCCCHHHHHHHHHH---CCcEEe
Confidence 2236688899999976 33333321000 0 00 01122222331 1224667777775 443221
Q ss_pred cccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhc
Q 013210 381 SLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDS 442 (447)
Q Consensus 381 s~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~ 442 (447)
- +..| ..+.+||++. ..+..+++|.|.++|..+.++
T Consensus 841 t-------~~fP------------------v~~~LmIepT-E~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 841 T-------MSFP------------------VPGTLMVEPT-ESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred E-------Eeec------------------cCCEEEEEee-eeCCHHHHHHHHHHHHHHHHH
Confidence 0 0111 1478999999 888899999999988877543
No 329
>PRK06149 hypothetical protein; Provisional
Probab=99.68 E-value=6e-15 Score=162.27 Aligned_cols=257 Identities=15% Similarity=0.146 Sum_probs=155.2
Q ss_pred CCCCchHHHHHHHHHHHh--CCCeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhh---c---CcccC
Q 013210 95 RHFNPTVLNLSRQMAALE--GTEAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHF---F---PRACN 164 (447)
Q Consensus 95 r~~~~~~~~l~~~ia~l~--g~~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~---~---~~~~g 164 (447)
+...+...++.++|+++. +.+.++|++||+||+..|++... ...++||+....||+........ . +...+
T Consensus 620 ~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~ 699 (972)
T PRK06149 620 RFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALE 699 (972)
T ss_pred cccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccC
Confidence 345567788999999987 45789999999999999998432 22357888888888754221000 0 00000
Q ss_pred ---eeEEEeC--------C--CC-----HHHHHHhhc-----cCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCC
Q 013210 165 ---ITTTFVD--------I--SD-----HEMVNSAIV-----QGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGV 217 (447)
Q Consensus 165 ---~~~~~v~--------~--~d-----~~~l~~~i~-----~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi 217 (447)
-.+..++ . ++ .+++++.++ .+++.+|++|.+....|.+.+ +++|.++|++||+
T Consensus 700 ~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~ 779 (972)
T PRK06149 700 TRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGG 779 (972)
T ss_pred CCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCC
Confidence 0011111 1 11 234433331 246889999999999999887 9999999999999
Q ss_pred EEEEeCCCCCCCCC------c--cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHH
Q 013210 218 TVVVDNTFSPLVLS------P--ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVA 289 (447)
Q Consensus 218 ~livD~~~~~~~~~------~--~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a 289 (447)
++|+||+++++..- . .....|++ +++|.+|+ |..+ |++++++++.+.+........+..|++++..++
T Consensus 780 llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv--t~gK~lg~-G~Pl-~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaa 855 (972)
T PRK06149 780 VCIADEVQVGYGRLGHYFWGFEQQGVVPDII--TMAKGMGN-GHPL-GAVITRREIAEALEAEGYFFSSTGGSPVSCRIG 855 (972)
T ss_pred EEEEEeehhcCCccCccchhhhhcCCCCCEE--EecccccC-Ceee-EEEEEcHHHHhhhccCCcccCCCCCCHHHHHHH
Confidence 99999999655321 1 12235666 58999994 5777 888889998887753111111233444444444
Q ss_pred HHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--------HHH
Q 013210 290 FELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--------EEK 361 (447)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--------~~~ 361 (447)
.+.+..++. ....++..+..++|.+.|++...+ +|-.. ...|.|.++.++|.. .+.
T Consensus 856 la~L~~i~~-e~l~~~~~~~G~~l~~~L~~l~~~--~~~i~-------------~vrG~Gl~~gvel~~~~~~~~~~~~~ 919 (972)
T PRK06149 856 MAVLDVLRE-EKLQENARRVGDHLKARLEALADR--HPLIG-------------AVHGMGLYLGVELVRDRQTLEPATEE 919 (972)
T ss_pred HHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHh--CCCeE-------------EEeecceEEEEEEecCcccCCCChHH
Confidence 444333321 113344555556676776653111 11100 223788999999841 223
Q ss_pred HHHHHHHhhc
Q 013210 362 ANRLMNYLQN 371 (447)
Q Consensus 362 ~~~l~~~l~~ 371 (447)
+..+.+.+..
T Consensus 920 ~~~i~~~l~~ 929 (972)
T PRK06149 920 TAAICDRLLE 929 (972)
T ss_pred HHHHHHHHHh
Confidence 4566777665
No 330
>PRK06148 hypothetical protein; Provisional
Probab=99.68 E-value=3.4e-15 Score=164.31 Aligned_cols=295 Identities=16% Similarity=0.135 Sum_probs=178.2
Q ss_pred CCCCchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcC-C-CCeEEEeCCCchhHHHHHHhhc----Cccc--C
Q 013210 95 RHFNPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCS-S-GGHVVAARTLYGGTHALLTHFF----PRAC--N 164 (447)
Q Consensus 95 r~~~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~-~-gd~Vi~~~~~y~~~~~~~~~~~----~~~~--g 164 (447)
++.++...++.++|+++... +.++|++||+||+..|++.... . .++||+....||+........- .... +
T Consensus 659 ~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~ 738 (1013)
T PRK06148 659 RYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKG 738 (1013)
T ss_pred CcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCC
Confidence 44567777888888888753 6799999999999999986432 2 3579999998888653221100 0000 1
Q ss_pred --eeEEE--------eCCC--C-------HHHHHHhhc-----cCCceEEEEEcCCCCCccccC----HHHHHHHHHhcC
Q 013210 165 --ITTTF--------VDIS--D-------HEMVNSAIV-----QGRTKVLYFESISNPTLAVAN----IPELSRLAHDKG 216 (447)
Q Consensus 165 --~~~~~--------v~~~--d-------~~~l~~~i~-----~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~g 216 (447)
..+.. .+.. + .+.+++.++ .+++.+|++|.+....|.+.+ +++|.++|++||
T Consensus 739 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g 818 (1013)
T PRK06148 739 RPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAG 818 (1013)
T ss_pred CCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhC
Confidence 01111 1111 1 134554442 146899999999998898876 899999999999
Q ss_pred CEEEEeCCCCCCCCC------ccCCC--CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHH
Q 013210 217 VTVVVDNTFSPLVLS------PARLG--ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKV 288 (447)
Q Consensus 217 i~livD~~~~~~~~~------~~~~g--~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~ 288 (447)
+++|+||+++++... ...+| .|+++ ++|.+|+ |.++ |++++++++++.+........+..|++++..+
T Consensus 819 ~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt--~gK~lgg-G~Pl-gav~~~~ei~~~~~~g~~~~~Tf~gnpla~aa 894 (1013)
T PRK06148 819 GVCIADEVQVGFGRVGSHWWAFETQGVVPDIVT--MGKPIGN-GHPM-GAVVTTREIADSFDNGMEYFNTFGGNPVSCAI 894 (1013)
T ss_pred CEEEEEecccCCCCCCCcchhhhhcCCCcceee--ecccccC-Ccce-EEEEEcHHHHhhccCCCccccCCCCCHHHHHH
Confidence 999999999665311 11234 56655 8999995 6888 88888899887765321112334555555555
Q ss_pred HHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--------HH
Q 013210 289 AFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--------EE 360 (447)
Q Consensus 289 a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--------~~ 360 (447)
+.+.+..++. ....++..+..++|.+.|+++..+....+ +..|.|.++.+++.. .+
T Consensus 895 a~a~L~~i~~-e~l~~~~~~~G~~l~~~L~~l~~~~~~i~---------------~VrG~Gl~~gvel~~~~~~~~~~~~ 958 (1013)
T PRK06148 895 GLAVLDIIED-EDLQRNALEIGNYLLAGLRELQDRFDIIG---------------DVRGMGLFLGIELVTDRKTKAPATA 958 (1013)
T ss_pred HHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHHhCCCce---------------EEeeeceEEEEEecCCccccCccHH
Confidence 5444443322 12345556666677777765311110011 223788899999852 12
Q ss_pred HHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 361 KANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 361 ~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
.+..+++.+.. .|++....| ...+.|||.+. ...+++.++.+.++|++.
T Consensus 959 ~~~~i~~~~~~---~Gvl~~~~g--------------------------~~~~vlr~~Pp-l~it~~~id~~l~~l~~~ 1007 (1013)
T PRK06148 959 IARYVKNGARE---RGILIGTEG--------------------------PHDNVLKIRPP-LIFSRADADHLLEVLDDV 1007 (1013)
T ss_pred HHHHHHHHHHh---CCeEEeccC--------------------------CCCCEEEEeCC-ccCCHHHHHHHHHHHHHH
Confidence 34556666665 233221111 12467888888 655555565555555443
No 331
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.68 E-value=3.4e-15 Score=145.86 Aligned_cols=282 Identities=18% Similarity=0.225 Sum_probs=161.3
Q ss_pred ccccccccccCCH-HHHHHhhcCCCCCCCCCccccCCC--CchH----HHHHHHHHHHhCCC----eE-EEeCChHHHHH
Q 013210 61 SIEASATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHF--NPTV----LNLSRQMAALEGTE----AA-YCTASGMSAIS 128 (447)
Q Consensus 61 pi~~att~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~--~~~~----~~l~~~ia~l~g~~----~~-~~tsggt~A~~ 128 (447)
++.+|..++.|.+ +.+-..+..+|. .+|.-.|+. ...+ ..+.+++.++++++ .+ +=.-||+.|+.
T Consensus 24 ~LiaSEN~~Sp~v~~al~S~l~nkya---eg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~ 100 (399)
T PF00464_consen 24 NLIASENYMSPAVREALGSDLTNKYA---EGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANL 100 (399)
T ss_dssp E-CTT-----HHHHHHHTSGGGGS-T---TEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHH
T ss_pred cccCcccccCHHHHHHhCCcceeecc---ccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHH
Confidence 4566677776665 443344444431 112111221 2222 33566777889998 54 34569999999
Q ss_pred HHHHHhcCCCCeEEEeCCCchhHHHHHH--hh--cC-cccCeeEEEeCCC------CHHHHHHhhccCCceEEEEEcCCC
Q 013210 129 SVLMQLCSSGGHVVAARTLYGGTHALLT--HF--FP-RACNITTTFVDIS------DHEMVNSAIVQGRTKVLYFESISN 197 (447)
Q Consensus 129 ~al~~l~~~gd~Vi~~~~~y~~~~~~~~--~~--~~-~~~g~~~~~v~~~------d~~~l~~~i~~~~t~lV~i~~~~N 197 (447)
+++.+|+++||+|+..+..+++....-. .. .. .....++..++.+ |.+++++.++..++++|++...+.
T Consensus 101 av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y 180 (399)
T PF00464_consen 101 AVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSY 180 (399)
T ss_dssp HHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SST
T ss_pred HHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhc
Confidence 9999999999999999988766532110 00 00 0012233333332 899999988667899999866554
Q ss_pred CCccccCHHHHHHHHHhcCCEEEEeCCC------CCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcC---------
Q 013210 198 PTLAVANIPELSRLAHDKGVTVVVDNTF------SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGP--------- 262 (447)
Q Consensus 198 ptG~v~~l~~I~~la~~~gi~livD~~~------~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~--------- 262 (447)
| ...|++++.++|++.|+++++|.+| ++...+|... +|++++|.||.+.||- ||+++.+
T Consensus 181 ~--~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-ADvvt~sThKtl~GPr---ggiI~~~~~~~~~~~~ 254 (399)
T PF00464_consen 181 P--RPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-ADVVTGSTHKTLRGPR---GGIILTNKGSKNVDKK 254 (399)
T ss_dssp S--S---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-SSEEEEESSGGG-SSS----EEEEES-SEEEE-TT
T ss_pred c--CccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc-ceEEEeeccccccccC---ceEEEEcCCccccCCc
Confidence 3 5679999999999999999999998 3344578876 9999999999998774 5888877
Q ss_pred -----hHHHHHHHHHhhhhhhhcCCCccHHHHHHH--HccCC-cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCch
Q 013210 263 -----ANLVNSMMDLHQGALMLLGPTMNPKVAFEL--SERIP-HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPH 334 (447)
Q Consensus 263 -----~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~--~~~~~-~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~ 334 (447)
+++.+++...-... ...+..+...+|.+. ...+. .+.+..++..++++.|++.|.+.|+++..-+-.
T Consensus 255 ~~~~~~~l~~~I~~avfP~-~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~~ggTd---- 329 (399)
T PF00464_consen 255 GKEIDEELAEKIDSAVFPG-LQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERGFKVVTGGTD---- 329 (399)
T ss_dssp S-EEEHHHHHHHHHHHTTT-T-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-EEGGGS-S----
T ss_pred ccccHHHHHHHhccccCCC-cccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCcEEEECCCC----
Confidence 77888887543311 123333333333332 22222 356778888999999999999999988753321
Q ss_pred hHHHHHHhccCCCcCcEEEEEeC----CHHHHHHHHHHhh
Q 013210 335 HELLKSMANKEYGFGGLLCLDME----TEEKANRLMNYLQ 370 (447)
Q Consensus 335 ~~l~~~~~~~~~g~g~~~~~~l~----~~~~~~~l~~~l~ 370 (447)
..++.+.+. +...++..++++.
T Consensus 330 --------------~H~vlvd~~~~~~~g~~a~~~Le~~g 355 (399)
T PF00464_consen 330 --------------NHQVLVDLRSFGIDGKEAEKALEEAG 355 (399)
T ss_dssp --------------SSEEEEEGGGGTS-HHHHHHHHHHTT
T ss_pred --------------CCeEEEEecccccchHHHHHHHHhcC
Confidence 228888875 2334555555554
No 332
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.68 E-value=9.5e-15 Score=148.19 Aligned_cols=240 Identities=17% Similarity=0.184 Sum_probs=145.8
Q ss_pred CCCchHHHHHHHHHHHhCC-----CeEEEe-CChHHHHHHHHHHhc-CCC-CeEEEeCCCchhHHHHHHhhc----Cc-c
Q 013210 96 HFNPTVLNLSRQMAALEGT-----EAAYCT-ASGMSAISSVLMQLC-SSG-GHVVAARTLYGGTHALLTHFF----PR-A 162 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g~-----~~~~~t-sggt~A~~~al~~l~-~~g-d~Vi~~~~~y~~~~~~~~~~~----~~-~ 162 (447)
..++...++.+++.++... +.++|+ +||+||+..|++... .+| ++||.....||+........- .+ .
T Consensus 103 ~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~ 182 (464)
T PRK06938 103 LTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKP 182 (464)
T ss_pred cCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCcccccc
Confidence 4566667787888877542 256665 799999999998543 233 578888888988654331110 00 0
Q ss_pred c-C--eeEEEeCCC-----------------CHHHHHHhhcc-----CCceEEEEEcCCCCCccccC----HHHHHHHHH
Q 013210 163 C-N--ITTTFVDIS-----------------DHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN----IPELSRLAH 213 (447)
Q Consensus 163 ~-g--~~~~~v~~~-----------------d~~~l~~~i~~-----~~t~lV~i~~~~NptG~v~~----l~~I~~la~ 213 (447)
. + ..+.+++.. +++.+++.+++ +++.+|++|.+....|.+.| +++|.++|+
T Consensus 183 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~ 262 (464)
T PRK06938 183 LGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITE 262 (464)
T ss_pred CCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence 0 0 122333321 25667777732 25899999999988888764 889999999
Q ss_pred hcCCEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccH
Q 013210 214 DKGVTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNP 286 (447)
Q Consensus 214 ~~gi~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~ 286 (447)
+||+++|+||+++++... -.....|+++ ++|.+|+ |.++ |+++.++++ +.+.... ...+..|++++.
T Consensus 263 ~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gKglgg-G~Pl-sAv~~~~~~-~~~~~~~-~~~T~~gnpla~ 336 (464)
T PRK06938 263 EAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVV--LSKAIGG-SLPL-AVVVYREWL-DTWQPGA-HAGTFRGNQMAM 336 (464)
T ss_pred HcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEE--eeccccC-CCce-EEEeehhHh-hccCCCC-CCCCCCcCHHHH
Confidence 999999999999766321 1222456766 8999985 6888 666666664 4332211 122344555554
Q ss_pred HHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 287 KVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 287 ~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
.++.+.+..++. ....++..+..++|.+.|+++..+ +|... +..|.|.++.++|.
T Consensus 337 Aaa~a~L~~l~~-~~l~~~~~~~G~~l~~~L~~l~~~--~~~i~-------------~VrG~Glm~gie~~ 391 (464)
T PRK06938 337 AAGSATLRYIKE-HRLAEHAAAMGERLREHLRQLQRD--YPQLG-------------DVRGRGLMLGVEIV 391 (464)
T ss_pred HHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHh--CCCee-------------eeeccceEEEEEec
Confidence 444444433321 123345555666666666543111 11000 22378889999995
No 333
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.68 E-value=7.7e-15 Score=148.91 Aligned_cols=241 Identities=11% Similarity=0.121 Sum_probs=150.9
Q ss_pred CCchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcC-------CC-CeEEEeCCCchhHHHHHHhhcCc-----
Q 013210 97 FNPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHALLTHFFPR----- 161 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~-------~g-d~Vi~~~~~y~~~~~~~~~~~~~----- 161 (447)
.++...++.++|+++... +.++|++||+||+..|++.... +| .+|+.....||+........-..
T Consensus 97 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~ 176 (460)
T PRK06916 97 ANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQ 176 (460)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCccccc
Confidence 456667888889888753 5799999999999999985432 33 58999999998865332111000
Q ss_pred ccC---eeEEEeCC-----------------CCHHHHHHhhc--cCCceEEEEEc-CCCCCccccC----HHHHHHHHHh
Q 013210 162 ACN---ITTTFVDI-----------------SDHEMVNSAIV--QGRTKVLYFES-ISNPTLAVAN----IPELSRLAHD 214 (447)
Q Consensus 162 ~~g---~~~~~v~~-----------------~d~~~l~~~i~--~~~t~lV~i~~-~~NptG~v~~----l~~I~~la~~ 214 (447)
..+ ..+..++. .+++++++.++ .+++.+|++|. ++...|.+.+ +++|.++|++
T Consensus 177 ~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~ 256 (460)
T PRK06916 177 VYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTK 256 (460)
T ss_pred ccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHH
Confidence 000 01122211 03456666663 25789999999 6888887753 8899999999
Q ss_pred cCCEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHH----h--hhhhhhcC
Q 013210 215 KGVTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDL----H--QGALMLLG 281 (447)
Q Consensus 215 ~gi~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~----~--~~~~~~~g 281 (447)
||+++|+||+++++... ......|+++ ++|.+++.-.++ |++++++++++.+... . ....+..|
T Consensus 257 ~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~--~gK~l~gG~~Pi-~av~~~~ei~~~~~~~~~~~~~~~~~~T~~g 333 (460)
T PRK06916 257 YNVLFITDEVATGFGRTGKMFACEHENVTPDIMT--AGKGLTGGYLPI-AITVTTDEIYNAFYGDYEEQKTFFHGHSYTG 333 (460)
T ss_pred cCCEEEeechhhCCCcCchhhHHHhcCCCCCeee--eehhhhcCcccc-ceeeecHHHHHHhhccccccCccccCCCCCC
Confidence 99999999999665211 1222467665 899998532467 8888888888766421 0 11122344
Q ss_pred CCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 282 PTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 282 ~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
+.++..++.+.+..++. ....++.+++.+++.+.|+++. + +|.+. +..|.|.++.+++.
T Consensus 334 npl~~aaa~a~l~~l~~-~~l~~~~~~~g~~l~~~l~~l~-~--~~~v~-------------~vrG~Glm~giel~ 392 (460)
T PRK06916 334 NPLGCAVALANLELYEK-TNLIEQVARKTEYVATQLEDLF-A--LKHVG-------------DIRQLGLMVGIELV 392 (460)
T ss_pred CHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHhh-c--CCCeE-------------EeecCCceeeEEee
Confidence 44444444444433321 1244566777777888877642 1 12111 22378899999985
No 334
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.67 E-value=9.4e-15 Score=147.38 Aligned_cols=288 Identities=14% Similarity=0.190 Sum_probs=167.7
Q ss_pred CCchHHHHHHHHHHHh---CCCeEEEeCChHHHHHHHHHHhcC--------C------CCeEEEeCCCchhHHHHHHhhc
Q 013210 97 FNPTVLNLSRQMAALE---GTEAAYCTASGMSAISSVLMQLCS--------S------GGHVVAARTLYGGTHALLTHFF 159 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~---g~~~~~~tsggt~A~~~al~~l~~--------~------gd~Vi~~~~~y~~~~~~~~~~~ 159 (447)
..+...++-++|+++. +.+.++|++||+||+..|++.... . +.+|+.....||+.........
T Consensus 83 ~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~ 162 (431)
T TIGR03251 83 YTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLT 162 (431)
T ss_pred CCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhcc
Confidence 3455566777777764 346799999999999999986521 1 3679999999988653331110
Q ss_pred C---cccC---------eeEEE--eCC-------------CCHHHHHHhhc--cCCceEEEEEcCCCCCccccC----HH
Q 013210 160 P---RACN---------ITTTF--VDI-------------SDHEMVNSAIV--QGRTKVLYFESISNPTLAVAN----IP 206 (447)
Q Consensus 160 ~---~~~g---------~~~~~--v~~-------------~d~~~l~~~i~--~~~t~lV~i~~~~NptG~v~~----l~ 206 (447)
. ...+ +...+ .+. .+++++++.+. .+++.+|++|.+....|.+.+ ++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~ 242 (431)
T TIGR03251 163 NTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLR 242 (431)
T ss_pred CCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHH
Confidence 0 0000 00000 000 12444555552 357899999999999998763 88
Q ss_pred HHHHHHHhcCCEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCccccCCCCeeEEEEEcCh--HHHHHHHHHh-hhh
Q 013210 207 ELSRLAHDKGVTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPA--NLVNSMMDLH-QGA 276 (447)
Q Consensus 207 ~I~~la~~~gi~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~--~~~~~l~~~~-~~~ 276 (447)
+|.++|++||+++|+||+|+++... ......|+++ ++|.+. ++|++.+++ ++........ ...
T Consensus 243 ~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~--~gK~~~-----~~g~~~~~~i~~~~~~~~~~~~~~~ 315 (431)
T TIGR03251 243 AMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVA--FGKKTQ-----VCGIMAGRRVDEVADNVFAVPSRLN 315 (431)
T ss_pred HHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEE--ecccCc-----cceEEecchHHHhhhhcccCccccC
Confidence 9999999999999999999766432 1223567776 788862 336666543 2221111100 111
Q ss_pred hhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEe
Q 013210 277 LMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDM 356 (447)
Q Consensus 277 ~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l 356 (447)
.+..|+.++..++.+.+..++.. ...++..++.+++.+.|++...+ +|.+.. +..|.|.++.+++
T Consensus 316 ~T~~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~--~~~~i~------------~vrg~G~~~~i~~ 380 (431)
T TIGR03251 316 STWGGNLVDMVRATRILEIIEEE-RLVDNARVQGAHLLARLHELAAE--FPHLVS------------NPRGRGLMCAFDL 380 (431)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHh--Ccccee------------cccccceeEEEEe
Confidence 22334444433333333332110 12344455555666666542110 111100 1126788999999
Q ss_pred CCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013210 357 ETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 436 (447)
Q Consensus 357 ~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 436 (447)
+..+....+...|.. .|++....| .+.+||++. ...++++++.+.++|
T Consensus 381 ~~~~~~~~~~~~l~~---~Gvl~~~~g----------------------------~~~lr~~P~-l~~t~~eid~~l~~l 428 (431)
T TIGR03251 381 PSTADRDEVIRQLYR---EGVLLLGCG----------------------------ERSIRFRPP-LTVTREEIDAAIDAI 428 (431)
T ss_pred CCHHHHHHHHHHHHh---CCeEEecCC----------------------------CCeEEEECC-ccCCHHHHHHHHHHH
Confidence 865555667777775 343221111 256999999 888999999998888
Q ss_pred HH
Q 013210 437 SR 438 (447)
Q Consensus 437 ~~ 438 (447)
++
T Consensus 429 ~~ 430 (431)
T TIGR03251 429 RR 430 (431)
T ss_pred Hh
Confidence 75
No 335
>PRK07483 hypothetical protein; Provisional
Probab=99.67 E-value=4.3e-15 Score=150.06 Aligned_cols=240 Identities=17% Similarity=0.205 Sum_probs=148.4
Q ss_pred CCCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcC-------CC-CeEEEeCCCchhHHHHHHhh-------
Q 013210 96 HFNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHALLTHF------- 158 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~~-------~g-d~Vi~~~~~y~~~~~~~~~~------- 158 (447)
..++...++.++|+++.. .+.++|++||+||+..|++.... ++ .+|+.....||+........
T Consensus 70 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~ 149 (443)
T PRK07483 70 FTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRR 149 (443)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccc
Confidence 345666788899988864 46899999999999999985431 23 47899898888875322110
Q ss_pred ---cCcccCeeEEEeCCC----C--------------HHHHHHhhc---cCCceEEEEEcCCC-CCccccC----HHHHH
Q 013210 159 ---FPRACNITTTFVDIS----D--------------HEMVNSAIV---QGRTKVLYFESISN-PTLAVAN----IPELS 209 (447)
Q Consensus 159 ---~~~~~g~~~~~v~~~----d--------------~~~l~~~i~---~~~t~lV~i~~~~N-ptG~v~~----l~~I~ 209 (447)
.+...+ +.+++.. + ++++++.+. .+++.+|++|.++. ..|.+.+ +++|.
T Consensus 150 ~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr 227 (443)
T PRK07483 150 EPFAPLLIE--AHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIR 227 (443)
T ss_pred cccCCCCCC--CEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHH
Confidence 111011 1222211 1 256666552 25689999999986 4576654 88999
Q ss_pred HHHHhcCCEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCccccCCCC-eeEEEEEcChHHHHHHHHHh---hhhhh
Q 013210 210 RLAHDKGVTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGAD-IIAGAVCGPANLVNSMMDLH---QGALM 278 (447)
Q Consensus 210 ~la~~~gi~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~-~igG~l~~~~~~~~~l~~~~---~~~~~ 278 (447)
++|++||+++|+||+++++... -.....|+++ ++|.+++ |. ++ |+++.++++.+.+.... ....+
T Consensus 228 ~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~g-G~~Pi-~av~~~~~i~~~~~~~~~~~~h~~T 303 (443)
T PRK07483 228 EVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVT--IAKGLGA-GYQPI-GAVLASDRIYDAIADGSGFFQHGHT 303 (443)
T ss_pred HHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeee--ehhhhcc-Ccccc-EEEEEcHHHHHHHhcCCCccccCCC
Confidence 9999999999999999766321 1122456666 8999985 54 67 78888888887765321 11223
Q ss_pred hcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 279 LLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 279 ~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
..|++++..++.+.+..+++ ....++..+..++|.+.|++.-.+ +|... +..|.|.++.+++.
T Consensus 304 ~~gnpl~~aaa~a~l~~i~~-~~l~~~~~~~g~~l~~~L~~l~~~--~~~i~-------------~vRG~Glm~gie~~ 366 (443)
T PRK07483 304 YLGHATACAAALAVQRVIAE-DGLLANVRARGEQLRARLRERLGQ--HPHVG-------------DIRGRGLFVGVELV 366 (443)
T ss_pred CCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHhc--CCCee-------------eEeecccEEEEEEe
Confidence 44555555554444443322 123445556666666666542111 11100 12378889999984
No 336
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.67 E-value=1.5e-14 Score=145.17 Aligned_cols=230 Identities=17% Similarity=0.181 Sum_probs=155.8
Q ss_pred HHHHHHHHHHhCC-Ce--EEEeCChHHHHHHHHHHhcC-----CC---------CeEEEeCCCchhHHHHHHhhcCcccC
Q 013210 102 LNLSRQMAALEGT-EA--AYCTASGMSAISSVLMQLCS-----SG---------GHVVAARTLYGGTHALLTHFFPRACN 164 (447)
Q Consensus 102 ~~l~~~ia~l~g~-~~--~~~tsggt~A~~~al~~l~~-----~g---------d~Vi~~~~~y~~~~~~~~~~~~~~~g 164 (447)
+++-..++++++. +. -.||+|||+||.+++++... .+ ..|+++...|.++...+. ..|
T Consensus 104 ~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~-----~lG 178 (460)
T COG0076 104 ERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAAR-----YLG 178 (460)
T ss_pred HHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHH-----HhC
Confidence 3444456666776 33 69999999999998876421 11 169999999998888773 245
Q ss_pred eeEEEeCCC------CHHHHHHhhccCCceE--EEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCC---Cc-
Q 013210 165 ITTTFVDIS------DHEMVNSAIVQGRTKV--LYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVL---SP- 232 (447)
Q Consensus 165 ~~~~~v~~~------d~~~l~~~i~~~~t~l--V~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~---~~- 232 (447)
+..+.++.+ |+++|++++ ++++.. |+....+.++|.+-|+++|+++|+++++++|||++++++.. ++
T Consensus 179 ~~~~~v~~~~~~~~id~~~l~~~i-~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~ 257 (460)
T COG0076 179 LGLRRVPTVPTDYRIDVDALEEAI-DENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPD 257 (460)
T ss_pred CCceeEEeccCccccCHHHHHHHH-HhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCcc
Confidence 444443322 899999999 666665 77788899999999999999999999999999999966542 11
Q ss_pred ----cCC-CCeEEEeCCCccccCCCCeeEEEE-EcChHHHHHHHHHhhhhhh--------hcCCCc--cHHHHHHHHccC
Q 013210 233 ----ARL-GADVVVHSISKFISGGADIIAGAV-CGPANLVNSMMDLHQGALM--------LLGPTM--NPKVAFELSERI 296 (447)
Q Consensus 233 ----~~~-g~di~~~S~sK~~g~~g~~igG~l-~~~~~~~~~l~~~~~~~~~--------~~g~~~--~~~~a~~~~~~~ 296 (447)
..+ ++|.++.++||++..|-. . |++ +.+++-..+...+...++. ..++.+ ....+|..++.+
T Consensus 258 ~~~~f~l~~vdSIt~d~HK~g~aP~~-~-G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~l 335 (460)
T COG0076 258 GRWDFGLEGVDSITVDGHKYGLAPIG-C-GVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRL 335 (460)
T ss_pred chhhcCCCCceEEEECcccccCCCCC-c-eEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHh
Confidence 112 789999999999986644 3 555 4555334333322111111 111111 223344444433
Q ss_pred --CcHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013210 297 --PHLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 358 (447)
Q Consensus 297 --~~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 358 (447)
+.+.+.+++..++++++++.|++.+ +++..++ ..++++|.+++
T Consensus 336 G~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p-------------------~l~~V~fr~~~ 381 (460)
T COG0076 336 GREGYRKLLDRTLELARYLAEELEKLGDFELVNEP-------------------ELPIVAFRLKD 381 (460)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCC-------------------ccceEEEEcCC
Confidence 5577788888999999999999987 4655432 12389999864
No 337
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.67 E-value=1.5e-14 Score=145.56 Aligned_cols=289 Identities=11% Similarity=0.109 Sum_probs=177.8
Q ss_pred CCchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcC-------CC-CeEEEeCCCchhHHHHHHhhcCc-----
Q 013210 97 FNPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHALLTHFFPR----- 161 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~-------~g-d~Vi~~~~~y~~~~~~~~~~~~~----- 161 (447)
.++...++.++++++.+. +.++|++||++|+..+++.... +| .+||.....||+...........
T Consensus 86 ~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~ 165 (427)
T TIGR00508 86 THKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMH 165 (427)
T ss_pred CCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCccccc
Confidence 445567788888888743 5799999999999999985431 22 57999999998865333111000
Q ss_pred -cc-C-e-eEEEeC-----------CCCHHHHHHhhc--cCCceEEEEEcC-CCCCcccc----CHHHHHHHHHhcCCEE
Q 013210 162 -AC-N-I-TTTFVD-----------ISDHEMVNSAIV--QGRTKVLYFESI-SNPTLAVA----NIPELSRLAHDKGVTV 219 (447)
Q Consensus 162 -~~-g-~-~~~~v~-----------~~d~~~l~~~i~--~~~t~lV~i~~~-~NptG~v~----~l~~I~~la~~~gi~l 219 (447)
.. + . .+..++ ..|++++++.+. .+++++|++|++ ++..|.+. ++++|.++|++||+++
T Consensus 166 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~ll 245 (427)
T TIGR00508 166 SLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILL 245 (427)
T ss_pred ccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 00 0 0 011111 014567777763 246789999996 66666544 4889999999999999
Q ss_pred EEeCCCCCCCCC-----c--cCCCCeEEEeCCCccccCCCC-eeEEEEEcChHHHHHHHHHhh----hhhhhcCCCccHH
Q 013210 220 VVDNTFSPLVLS-----P--ARLGADVVVHSISKFISGGAD-IIAGAVCGPANLVNSMMDLHQ----GALMLLGPTMNPK 287 (447)
Q Consensus 220 ivD~~~~~~~~~-----~--~~~g~di~~~S~sK~~g~~g~-~igG~l~~~~~~~~~l~~~~~----~~~~~~g~~~~~~ 287 (447)
|+||+++++... . ..+..|+++ ++|.+++ |. .+ +.++.++++.+.+..... ...+..++.++..
T Consensus 246 I~DEv~tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~g-G~~p~-~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~a 321 (427)
T TIGR00508 246 IADEIATGFGRTGKLFACEHAGVVPDILC--VGKALTG-GYMTL-SATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACA 321 (427)
T ss_pred EEeccccCCCcCCccchhhhcCCCCCEEE--echhhhc-Ccccc-eEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHH
Confidence 999999555321 1 223467776 8999974 53 45 888888888887763211 1112233444333
Q ss_pred HHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHH
Q 013210 288 VAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMN 367 (447)
Q Consensus 288 ~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~ 367 (447)
++.+.+..++.- ...++.+++.++|.+.|+++.. +|... ...|.|.++.+.+.+......+..
T Consensus 322 aa~a~l~~l~~~-~~~~~~~~~~~~l~~~L~~l~~---~~~i~-------------~vrg~G~~~~i~~~~~~~~~~~~~ 384 (427)
T TIGR00508 322 VAEASLAILLEG-EWQKQVSAIENQLKRELSPLRK---NPVVK-------------DVRVLGAIGVVEMYKPVNVEELQK 384 (427)
T ss_pred HHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHhhc---CCCEE-------------eEeccccEEEEEECCccCHHHHHH
Confidence 444443322211 2346677788888888877532 12111 122678899999975434566777
Q ss_pred HhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 368 YLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 368 ~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
+|... |+ .+... ...+|+++. ...+++.|+.+.++|++.
T Consensus 385 ~l~~~---Gv-~~~~~----------------------------~~~l~~~pp-l~~t~~~id~~~~~l~~~ 423 (427)
T TIGR00508 385 KFVEQ---GV-WIRPF----------------------------GKLIYVMPP-YIITTEQLQKLTAALIEA 423 (427)
T ss_pred HHHHC---Ce-EEEec----------------------------CCEEEEECC-CCCCHHHHHHHHHHHHHH
Confidence 77652 32 11100 135888888 767777777777777654
No 338
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.67 E-value=6e-15 Score=148.21 Aligned_cols=218 Identities=13% Similarity=0.140 Sum_probs=138.9
Q ss_pred CCchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcC-CC-CeEEEeCCCchhHHHH-HH--hh-------cCcc
Q 013210 97 FNPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCS-SG-GHVVAARTLYGGTHAL-LT--HF-------FPRA 162 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~-~g-d~Vi~~~~~y~~~~~~-~~--~~-------~~~~ 162 (447)
.++...++.++|.++.+. +.++|++||+||+..|++.... .| .+|+.....||+.... +. .. .+..
T Consensus 91 ~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~ 170 (433)
T PRK00615 91 TSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHL 170 (433)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCC
Confidence 355667788888887754 5799999999999999985432 34 5788889889986422 10 00 0000
Q ss_pred c-----CeeEEEeCCCCHHHHHHhhcc--CCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCC
Q 013210 163 C-----NITTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLS 231 (447)
Q Consensus 163 ~-----g~~~~~v~~~d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~ 231 (447)
. ......++.+|++++++.++. +++.+|++|.+....|.+.| +++|.++|++||+++|+||+++++...
T Consensus 171 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G 250 (433)
T PRK00615 171 VDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVA 250 (433)
T ss_pred CCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccccccc
Confidence 0 011223345688899888732 46789999999999999887 569999999999999999999665221
Q ss_pred ------ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhh--hhhhhcCCCccHHHHHHHHccCCcHHHHH
Q 013210 232 ------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ--GALMLLGPTMNPKVAFELSERIPHLGLRM 303 (447)
Q Consensus 232 ------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~--~~~~~~g~~~~~~~a~~~~~~~~~l~~~~ 303 (447)
-.....|+++ ++|.+|+ |..+ |++++++++++.+..... ...+..+++....++.+.+..+++ ....
T Consensus 251 ~~ga~~~~gv~PDi~~--~gK~lgg-G~p~-~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~-~~~~ 325 (433)
T PRK00615 251 QGGAAAIYHVKPDITV--YGKILGG-GLPA-AAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE-QGFY 325 (433)
T ss_pred HhHHHHhcCCCCCeEE--EcccccC-Ccce-eeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc-ccHH
Confidence 1122456765 8999984 4555 889999999887743211 011122333333333333333322 1234
Q ss_pred HHHHHHHHHHHHHHHh
Q 013210 304 KEHCHRALIFARRMKK 319 (447)
Q Consensus 304 ~~~~~~~~~l~~~L~~ 319 (447)
++..++.++|.+.|++
T Consensus 326 ~~~~~~g~~l~~~l~~ 341 (433)
T PRK00615 326 TQLSTLEQNFLSPIEE 341 (433)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5556666666555544
No 339
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.67 E-value=9.2e-15 Score=137.26 Aligned_cols=247 Identities=13% Similarity=0.128 Sum_probs=157.2
Q ss_pred ccccCCCCchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhc-CCC-CeEEEeCCCchhHHHHHHhh---cCccc
Q 013210 91 FIYSRHFNPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLC-SSG-GHVVAARTLYGGTHALLTHF---FPRAC 163 (447)
Q Consensus 91 ~~~~r~~~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~-~~g-d~Vi~~~~~y~~~~~~~~~~---~~~~~ 163 (447)
|...-+.++.+.++.+.++..+.. ..++|+|||+|||.++++... -.| -+||.....||+........ -+...
T Consensus 84 H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~ 163 (442)
T KOG1404|consen 84 HTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQ 163 (442)
T ss_pred EeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccc
Confidence 444455566667777777776643 458999999999999987542 223 37888888887754333110 00000
Q ss_pred ---Ce--eEEEe-CCC--------C---------HHHHHHhhc---cCCceEEEEEcCCCCCccccC----HHHHHHHHH
Q 013210 164 ---NI--TTTFV-DIS--------D---------HEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPELSRLAH 213 (447)
Q Consensus 164 ---g~--~~~~v-~~~--------d---------~~~l~~~i~---~~~t~lV~i~~~~NptG~v~~----l~~I~~la~ 213 (447)
+. .+... .++ + .+++++.+. .+.+.+.+.|+++.-.|.+++ +++..++|+
T Consensus 164 ~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~ 243 (442)
T KOG1404|consen 164 NFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVR 243 (442)
T ss_pred cCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHH
Confidence 00 00000 010 1 134444442 234678888999998899975 889999999
Q ss_pred hcCCEEEEeCCCCCCCC-----CccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHH
Q 013210 214 DKGVTVVVDNTFSPLVL-----SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKV 288 (447)
Q Consensus 214 ~~gi~livD~~~~~~~~-----~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~ 288 (447)
++|.++|.||+|+++.. .....++.-.+.|+.|.+| .|..+ |+++..+++.+.+.+..+++.+..|++++..+
T Consensus 244 k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiG-nG~Pl-~AVvtt~EIa~v~~~~~~~fnTyggnP~a~av 321 (442)
T KOG1404|consen 244 KRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIG-NGFPL-GAVVTTPEIADVLNQKSSHFNTYGGNPVACAV 321 (442)
T ss_pred HcCCEEEehhhhhccccccccccccccCCCccHHHHHhhcc-CCCcc-eeeecCHHHHHHHHhccccccccCCCchhHHH
Confidence 99999999999966642 3334466666667999999 56888 88888899998887665456667777777766
Q ss_pred HHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 289 AFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 289 a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
+.+++.-++. +...++..+-..+|.+.|.+... .+.. +.+|.|.|+.+++.
T Consensus 322 g~aVL~Vike-e~LqE~aa~vG~yl~~~l~~l~d~h~iIG-----------------dVRG~GLm~GvE~V 374 (442)
T KOG1404|consen 322 GLAVLKVIKE-ENLQENAAEVGSYLLEKLAALKDKHPIIG-----------------DVRGRGLMLGVELV 374 (442)
T ss_pred HHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhcCCcee-----------------ecccceeEEEEEEe
Confidence 6665554432 11223334455566666655422 2221 23478899999986
No 340
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.66 E-value=2.4e-14 Score=145.25 Aligned_cols=172 Identities=14% Similarity=0.179 Sum_probs=116.5
Q ss_pred CCCchHHHHHHHHHHHhC-------CCeEEEeCChHHHHHHHHHHhcC-------C-CCeEEEeCCCchhHHHHHHhhcC
Q 013210 96 HFNPTVLNLSRQMAALEG-------TEAAYCTASGMSAISSVLMQLCS-------S-GGHVVAARTLYGGTHALLTHFFP 160 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g-------~~~~~~tsggt~A~~~al~~l~~-------~-gd~Vi~~~~~y~~~~~~~~~~~~ 160 (447)
..++...++.++|+++.. .+.++|++||+||+..|++.... + ..+||.....||+........-.
T Consensus 104 ~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~ 183 (472)
T PRK08742 104 FTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGD 183 (472)
T ss_pred cCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccC
Confidence 345666788888888764 25799999999999999986431 2 25899999999886533211100
Q ss_pred c-----ccC---eeEEEeCCC-----------------CHHHHHHhhc--cCCceEEEEEc-CCCCCccccC----HHHH
Q 013210 161 R-----ACN---ITTTFVDIS-----------------DHEMVNSAIV--QGRTKVLYFES-ISNPTLAVAN----IPEL 208 (447)
Q Consensus 161 ~-----~~g---~~~~~v~~~-----------------d~~~l~~~i~--~~~t~lV~i~~-~~NptG~v~~----l~~I 208 (447)
. ..+ ..+.+++.. +++.+++.+. .+++.+|++|. +++..|.+.+ ++++
T Consensus 184 ~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~l 263 (472)
T PRK08742 184 IPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRA 263 (472)
T ss_pred CcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHH
Confidence 0 000 012222221 2456666663 25789999999 5888887654 8899
Q ss_pred HHHHHhcCCEEEEeCCCCCCCCC-----c--cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHH
Q 013210 209 SRLAHDKGVTVVVDNTFSPLVLS-----P--ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMM 270 (447)
Q Consensus 209 ~~la~~~gi~livD~~~~~~~~~-----~--~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~ 270 (447)
.++|++||+++|+||+++++... . .....|+++ ++|.+++.-.++ |+++.++++++.+.
T Consensus 264 r~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~--~gKgl~gG~~Pl-aav~~~~ei~~~~~ 329 (472)
T PRK08742 264 RELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLC--LSKGLTGGFLPL-SAVLATQQLYDAFL 329 (472)
T ss_pred HHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEE--EcccccCCCCCc-ceeeccHHHHHHhh
Confidence 99999999999999999666321 1 122456666 799998532367 77888888887664
No 341
>PRK07480 putative aminotransferase; Validated
Probab=99.66 E-value=1e-14 Score=147.77 Aligned_cols=242 Identities=15% Similarity=0.215 Sum_probs=147.4
Q ss_pred CCCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcC-------CC-CeEEEeCCCchhHHHHHHhh-----cC
Q 013210 96 HFNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHALLTHF-----FP 160 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~~-------~g-d~Vi~~~~~y~~~~~~~~~~-----~~ 160 (447)
..++...++.++|+++.+ .+.++|++||+||+..|++.... +| ++||.....||+........ ..
T Consensus 91 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~ 170 (456)
T PRK07480 91 TTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMH 170 (456)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhh
Confidence 456777889999998874 36799999999999999975421 23 46888888888864221000 00
Q ss_pred cccC---eeEEEeCCC---------------C--HHHHHHhhc---cCCceEEEEEcCCCCCccccC----HHHHHHHHH
Q 013210 161 RACN---ITTTFVDIS---------------D--HEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPELSRLAH 213 (447)
Q Consensus 161 ~~~g---~~~~~v~~~---------------d--~~~l~~~i~---~~~t~lV~i~~~~NptG~v~~----l~~I~~la~ 213 (447)
...+ ..+..++.. + ++.+++.+. .+++.+|++|.++...|.+.+ +++|.++|+
T Consensus 171 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~ 250 (456)
T PRK07480 171 EQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICR 250 (456)
T ss_pred cccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 0001 012222211 1 255654442 257889999999998898876 899999999
Q ss_pred hcCCEEEEeCCCCCCCC-----CccCCC--CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHH-Hh--hhhhhhcCCC
Q 013210 214 DKGVTVVVDNTFSPLVL-----SPARLG--ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMD-LH--QGALMLLGPT 283 (447)
Q Consensus 214 ~~gi~livD~~~~~~~~-----~~~~~g--~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~-~~--~~~~~~~g~~ 283 (447)
+||+++|+||+++++.. ....+| .|+++ ++|.+++.-.++ |++++++++++.+.. .. ....+..|++
T Consensus 251 ~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG~~Pi-~av~~~~~i~~~~~~~~~~~~~~~T~~gnp 327 (456)
T PRK07480 251 KYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMT--IAKGLTSGYIPM-GAVGVGDRVAEVLIEEGGEFNHGFTYSGHP 327 (456)
T ss_pred HcCCEEEEechhhCCCcCcchhhhhhcCCCCCeee--eehhhccCCccc-eEEEEcHHHHHHHhcCCCCcccCCCCCcCH
Confidence 99999999999966621 111224 56655 899999532357 777778888877631 11 1122345554
Q ss_pred ccHHHHHHHHccCCcHHHHHHHH-HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 284 MNPKVAFELSERIPHLGLRMKEH-CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 284 ~~~~~a~~~~~~~~~l~~~~~~~-~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
++..++.+.+..++. ....++. .+..++|.+.|++.. + +|... +..|.|.++.+++.
T Consensus 328 l~~Aaa~a~L~~l~~-~~l~~~~~~~~g~~l~~~l~~l~-~--~~~i~-------------~vrG~Glm~gie~~ 385 (456)
T PRK07480 328 VAAAVALANLRILRD-EGIVERVRDDTGPYLQKRLRELA-D--HPLVG-------------EVRGVGLVGAIELV 385 (456)
T ss_pred HHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHhh-c--CCCee-------------eEEeecceEEEEEe
Confidence 444444444433321 1133444 355666666666531 1 12111 22378899999994
No 342
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.66 E-value=2.7e-14 Score=145.00 Aligned_cols=241 Identities=15% Similarity=0.146 Sum_probs=151.5
Q ss_pred CCCchHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcC-------C-CCeEEEeCCCchhHHHHHHhhcCc----
Q 013210 96 HFNPTVLNLSRQMAALEG--TEAAYCTASGMSAISSVLMQLCS-------S-GGHVVAARTLYGGTHALLTHFFPR---- 161 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g--~~~~~~tsggt~A~~~al~~l~~-------~-gd~Vi~~~~~y~~~~~~~~~~~~~---- 161 (447)
..++...++.++|+++.. .+.++|++||+||+..|++.... + ..+|+.....||+........-..
T Consensus 87 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~ 166 (466)
T PRK07030 87 FSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFT 166 (466)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCcccc
Confidence 345666788888888764 46799999999999999986421 2 357999999998865332111000
Q ss_pred -ccC---eeEEEeCCC-----------------CHHHHHHhhc--cCCceEEEEEc-CCCCCccccC----HHHHHHHHH
Q 013210 162 -ACN---ITTTFVDIS-----------------DHEMVNSAIV--QGRTKVLYFES-ISNPTLAVAN----IPELSRLAH 213 (447)
Q Consensus 162 -~~g---~~~~~v~~~-----------------d~~~l~~~i~--~~~t~lV~i~~-~~NptG~v~~----l~~I~~la~ 213 (447)
..+ ..+..++.. +++++++.+. .+++.+|++|. ++...|.+.+ +++|.++|+
T Consensus 167 ~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~ 246 (466)
T PRK07030 167 ETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACD 246 (466)
T ss_pred ccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHH
Confidence 000 012222211 2456677763 25789999999 6888888764 889999999
Q ss_pred hcCCEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCccccCCC-CeeEEEEEcChHHHHHHHHH------hhhhhhh
Q 013210 214 DKGVTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGA-DIIAGAVCGPANLVNSMMDL------HQGALML 279 (447)
Q Consensus 214 ~~gi~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g-~~igG~l~~~~~~~~~l~~~------~~~~~~~ 279 (447)
+||+++|+||+++++... ......|+++ ++|.+++ | .++ |++++++++.+.+... .....+.
T Consensus 247 ~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~--~gKgl~g-G~~Pi-~av~~~~ei~~~~~~~~~~~~~~~h~~T~ 322 (466)
T PRK07030 247 RYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLC--LSKALTG-GYLPL-AAVLTTDTVYQAFYDDYPTLRAFLHSHSY 322 (466)
T ss_pred HcCCEEEEeehhhCcCccccchHHHhcCCCCCEEe--eehhccC-Ccccc-eEEEecHHHHHHHhcccccccccccCCCC
Confidence 999999999999666321 1223457776 7999995 6 467 8888899988776421 0112234
Q ss_pred cCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 280 LGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 280 ~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
.|++++..++.+.+..++. ....++..+..++|.+.|+++. + +|.+. +..|.|.++.+++.
T Consensus 323 ~gnpla~aaa~a~L~~i~~-~~l~~~~~~~G~~l~~~L~~l~-~--~~~v~-------------~vrG~Gl~~gie~~ 383 (466)
T PRK07030 323 TGNPLACAAALATLDIFEQ-DNVIENNRALARRMAEATAHLA-D--HPHVA-------------EVRQTGMILAIEMV 383 (466)
T ss_pred CCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHh-c--CCCEE-------------EeEeceeEEEEEec
Confidence 4455544444444433321 1234555666777777776542 1 22111 22378889999985
No 343
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.66 E-value=6.5e-14 Score=127.74 Aligned_cols=217 Identities=15% Similarity=0.140 Sum_probs=160.4
Q ss_pred HHHHHHHHHHhCC---CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----
Q 013210 102 LNLSRQMAALEGT---EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS----- 173 (447)
Q Consensus 102 ~~l~~~ia~l~g~---~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~----- 173 (447)
.++.+-+...+.. ...++..+|+.+...++..++.|||.|++....--+.+ +.+...+ +|++|..++.+
T Consensus 53 ~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~r--a~D~~~r-~ga~V~~v~~~~G~~~ 129 (385)
T KOG2862|consen 53 DEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQR--AADCARR-YGAEVDVVEADIGQAV 129 (385)
T ss_pred HHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHH--HHHHHHh-hCceeeEEecCcccCc
Confidence 4555555555543 34678889999999999999999999987765432222 2244556 89999998765
Q ss_pred CHHHHHHhhccCCceEEEEEcCCCCCccccC-HHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccC
Q 013210 174 DHEMVNSAIVQGRTKVLYFESISNPTLAVAN-IPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISG 250 (447)
Q Consensus 174 d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~-l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~ 250 (447)
.++.+++.+.+.+.++|++++.-..||..+| ++.+.++||+|++++++|.+. +...+...++|+|+......|.+|+
T Consensus 130 ~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~a 209 (385)
T KOG2862|consen 130 PLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGA 209 (385)
T ss_pred cHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCC
Confidence 8999999997788999999999999999999 677889999999999999997 6677888889999999999999997
Q ss_pred CCCeeEEEEEcChHHHHHHHHHhhh----------hhhhc---------CCCccHHHHH-----HHHccCCcHHHHHHHH
Q 013210 251 GADIIAGAVCGPANLVNSMMDLHQG----------ALMLL---------GPTMNPKVAF-----ELSERIPHLGLRMKEH 306 (447)
Q Consensus 251 ~g~~igG~l~~~~~~~~~l~~~~~~----------~~~~~---------g~~~~~~~a~-----~~~~~~~~l~~~~~~~ 306 (447)
|.. + +.++.++...++++..... .+... -.+++.+..+ +.+..-+.+..+.+++
T Consensus 210 P~G-L-siisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH 287 (385)
T KOG2862|consen 210 PAG-L-SIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRH 287 (385)
T ss_pred CCC-c-ceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 754 3 6777787777776543220 00011 1122222111 1111224477899999
Q ss_pred HHHHHHHHHHHHhCCCe
Q 013210 307 CHRALIFARRMKKLGLK 323 (447)
Q Consensus 307 ~~~~~~l~~~L~~~~~~ 323 (447)
+++.+++...|+++|++
T Consensus 288 ~e~s~~l~~~l~~~GLq 304 (385)
T KOG2862|consen 288 REMSKWLKLSLEALGLQ 304 (385)
T ss_pred HHHHHHHHHHHHHhCcc
Confidence 99999999999998873
No 344
>PRK06917 hypothetical protein; Provisional
Probab=99.65 E-value=4.1e-14 Score=143.10 Aligned_cols=242 Identities=12% Similarity=0.128 Sum_probs=147.9
Q ss_pred CCCchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcC-------CC-CeEEEeCCCchhHHHHHHhhcCc----
Q 013210 96 HFNPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHALLTHFFPR---- 161 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~~-------~g-d~Vi~~~~~y~~~~~~~~~~~~~---- 161 (447)
..++...++.++|+++... +.++|++||+||+..|++.... +| .+|+.....||+...........
T Consensus 71 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~ 150 (447)
T PRK06917 71 FTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRR 150 (447)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccc
Confidence 3456667888999888753 5699999999999999986521 23 57999999998865443111100
Q ss_pred -ccC---eeEEEeCC-----------------CCHHHHHHhhcc---CCceEEEEEcCCCC-CccccC----HHHHHHHH
Q 013210 162 -ACN---ITTTFVDI-----------------SDHEMVNSAIVQ---GRTKVLYFESISNP-TLAVAN----IPELSRLA 212 (447)
Q Consensus 162 -~~g---~~~~~v~~-----------------~d~~~l~~~i~~---~~t~lV~i~~~~Np-tG~v~~----l~~I~~la 212 (447)
..+ ..+..++. .+++.+++.++. +++.+|++|.+... .|.+.| +++|.++|
T Consensus 151 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc 230 (447)
T PRK06917 151 QRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEIC 230 (447)
T ss_pred ccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHH
Confidence 000 00111110 024566776632 46899999998764 445554 88999999
Q ss_pred HhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCccccCCCC-eeEEEEEcChHHHHHHHHHhh---hhhhhcC
Q 013210 213 HDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGAD-IIAGAVCGPANLVNSMMDLHQ---GALMLLG 281 (447)
Q Consensus 213 ~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~-~igG~l~~~~~~~~~l~~~~~---~~~~~~g 281 (447)
++||+++|+||+++++.. .-.....|+++ ++|.+++ |. ++ |++++++++++.+..... ...+..|
T Consensus 231 ~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~--~gK~l~~-G~~Pi-~a~~~~~~i~~~~~~~~~~~~~~~T~~g 306 (447)
T PRK06917 231 DHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMT--LGKGLGA-GYTPI-AATVVSDRVMEPILRGSRSIMSGHTLSA 306 (447)
T ss_pred HHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEE--eeehhcc-CCcce-EEEEEcHHHHHHHhccCcccccccCCCC
Confidence 999999999999966521 11122356655 8999985 53 67 778888888877653211 1122344
Q ss_pred CCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 282 PTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 282 ~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
++++..++.+.+..++. ....++..++.++|.+.|+++..+...+. +..|.|.++.++|.
T Consensus 307 npl~~aaa~a~l~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~i~---------------~vrG~Gl~~~ie~~ 366 (447)
T PRK06917 307 NPLSAATALAVLEYMEK-HNLPEKAAEKGEYLIKGLQKVQQQSTIIG---------------DVRGKGLLIGVEFV 366 (447)
T ss_pred CHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHhcCCCEE---------------EEeecceEEEEEEe
Confidence 45444444444433321 12445666667777777765421110011 22378889999984
No 345
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.64 E-value=4.4e-14 Score=143.28 Aligned_cols=240 Identities=12% Similarity=0.155 Sum_probs=142.8
Q ss_pred CCCchHHHHHHHHHHHhCC-C---eE-EEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhcCc--c----
Q 013210 96 HFNPTVLNLSRQMAALEGT-E---AA-YCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPR--A---- 162 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g~-~---~~-~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~--~---- 162 (447)
..++...++.++|+++.+. + .+ +|++||+||+..|++... ...++|+.....||+........-.. .
T Consensus 98 ~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~ 177 (459)
T PRK06931 98 LTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAV 177 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCC
Confidence 3456667888888888642 2 24 556999999999998542 22457999999998876544211100 0
Q ss_pred --cCeeEEEeCCC-------------CHHHH----HHhhc-----cCCceEEEEEcCCCCCccccC----HHHHHHHHHh
Q 013210 163 --CNITTTFVDIS-------------DHEMV----NSAIV-----QGRTKVLYFESISNPTLAVAN----IPELSRLAHD 214 (447)
Q Consensus 163 --~g~~~~~v~~~-------------d~~~l----~~~i~-----~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~ 214 (447)
....+.+++.. +.+.+ ++.+. .+++.+|++|.+....|.+.+ +++|.++|++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~ 257 (459)
T PRK06931 178 NGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQK 257 (459)
T ss_pred CCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHH
Confidence 01122333322 12222 33331 135889999999988888764 8899999999
Q ss_pred cCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHH
Q 013210 215 KGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPK 287 (447)
Q Consensus 215 ~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~ 287 (447)
||+++|+||+++++.. .-.....|+++ ++|.+++ |.++ |+++.++++ +.+.... ...+..|++++..
T Consensus 258 ~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt--~gK~l~g-G~Pi-~av~~~~~~-~~~~~~~-~~~T~~gnpla~a 331 (459)
T PRK06931 258 HGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIV--MSKAVGG-GLPL-AVLGIKKEF-DAWQPGG-HTGTFRGNQLAMA 331 (459)
T ss_pred cCCEEEEecchhcCCcCchHHHhhhcCCCCCEEE--ecccccC-Ccce-eeeeeHHHH-hhccCCC-CCCCCCCCHHHHH
Confidence 9999999999976631 11222456666 8999995 5888 666666553 4443221 2233455555554
Q ss_pred HHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013210 288 VAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 357 (447)
Q Consensus 288 ~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 357 (447)
++.+.+..++. ....++..+..++|.+.|++...+ +|... +..|.|.++.+++.
T Consensus 332 aala~L~~l~~-~~l~~~~~~~G~~l~~~L~~l~~~--~~~i~-------------~vrG~Glm~giel~ 385 (459)
T PRK06931 332 TGLTTLKILKE-ENLAQNAAERGEWLKAQLAELQKR--YPCIG-------------NVRGRGLMIGIEIV 385 (459)
T ss_pred HHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHh--CCCeE-------------eEecCceEEEEEEc
Confidence 44444433321 113344555555666666543111 11000 22378899999985
No 346
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.64 E-value=2e-15 Score=148.06 Aligned_cols=213 Identities=15% Similarity=0.223 Sum_probs=141.6
Q ss_pred CCchHHHHHHHHHHHhCCCeEE-EeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC--
Q 013210 97 FNPTVLNLSRQMAALEGTEAAY-CTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-- 173 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~g~~~~~-~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-- 173 (447)
....+.++++..|+++|++..+ +++|.|.+|.+++++++++||+|+++..+|.+++..+. +.|+.++|+++.
T Consensus 64 p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~ali-----l~ga~Pvyi~p~~~ 138 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALI-----LSGAIPVYIPPEDN 138 (417)
T ss_dssp TBTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHH-----HHTEEEEEEEEEE-
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHH-----HcCCeEEEecCCcc
Confidence 3456789999999999999865 56788899999999999999999999999999988773 368888877652
Q ss_pred --------CH-----HHHHHhhcc-CCce---EEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCC----
Q 013210 174 --------DH-----EMVNSAIVQ-GRTK---VLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLS---- 231 (447)
Q Consensus 174 --------d~-----~~l~~~i~~-~~t~---lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~---- 231 (447)
++ +.|++++++ +..+ +|++.+|+. .|.+.|+++|+++|++++++|++||+| +.+.+.
T Consensus 139 ~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~ 217 (417)
T PF01276_consen 139 EYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPR 217 (417)
T ss_dssp TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGT
T ss_pred ccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCCCCcc
Confidence 34 889888843 3444 499988864 699999999999999999999999999 555554
Q ss_pred -ccCCCCe-------EEEeCCCccccCCCCeeEEEEEcC-hH-H-HHHHHHHhhhhhhhcCCCccHHHHHHHHc-cCCc-
Q 013210 232 -PARLGAD-------VVVHSISKFISGGADIIAGAVCGP-AN-L-VNSMMDLHQGALMLLGPTMNPKVAFELSE-RIPH- 298 (447)
Q Consensus 232 -~~~~g~d-------i~~~S~sK~~g~~g~~igG~l~~~-~~-~-~~~l~~~~~~~~~~~g~~~~~~~a~~~~~-~~~~- 298 (447)
...+|+| +++.|.||.+++-. -++++-.+ .. + .++++.... ....+.++....+.....+ .++.
T Consensus 218 ~a~~~gad~~~~~~~~vvqS~HKtL~alt--Qts~lh~~~~~~v~~~~~~~~l~-~~~TTSPSY~lmASlD~a~~~m~~~ 294 (417)
T PF01276_consen 218 SALALGADRPNDPGIIVVQSTHKTLPALT--QTSMLHVKGDRIVDHERVNEALS-MHQTTSPSYPLMASLDVARAQMEEE 294 (417)
T ss_dssp TCSSTTSS-CTSBEEEEEEEHHHHSSS-T--T-EEEEEETCCCTTHHHHHHHHH-HHS-SS--HHHHHHHHHHHHHHSHH
T ss_pred chhhccCccccccceeeeechhhcccccc--cceEEEecCCCcccHHHHHHHHH-HHcCCChHHHHHHHHHHHHHHHhhh
Confidence 3456899 99999999998543 44666433 22 2 344443222 0002222222222222221 1211
Q ss_pred -HHHHHHHHHHHHHHHHHHHH
Q 013210 299 -LGLRMKEHCHRALIFARRMK 318 (447)
Q Consensus 299 -l~~~~~~~~~~~~~l~~~L~ 318 (447)
=...+++..++++.+++.|+
T Consensus 295 ~G~~l~~~~i~~a~~~R~~i~ 315 (417)
T PF01276_consen 295 EGRELLEEAIELAEEFRKKIN 315 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 12345566677777888874
No 347
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.64 E-value=2.4e-13 Score=128.18 Aligned_cols=271 Identities=15% Similarity=0.098 Sum_probs=163.7
Q ss_pred chhhHhhhcCCCCCCCCcccccc--c---cccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHH-hC
Q 013210 40 DPAAALASARHEFGEHGGVNMSI--E---ASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAAL-EG 113 (447)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~pi--~---~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l-~g 113 (447)
||.-.|.......+..+-|+-.| | ..-+++++.++..++.+.+... ...+.+-.+. ....+.++++ +|
T Consensus 11 DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~---~k~Yl~i~G~---~~f~~~~~~llFG 84 (396)
T COG1448 11 DPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEK---TKNYLPIEGL---PEFLEAVQKLLFG 84 (396)
T ss_pred CchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhcccc---ccccCCcCCc---HHHHHHHHHHhcC
Confidence 55555555444444444455433 2 2345666777666555543311 1222333332 4566666666 45
Q ss_pred CC---------eEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-------CH
Q 013210 114 TE---------AAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-------DH 175 (447)
Q Consensus 114 ~~---------~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-------d~ 175 (447)
.+ ..+-|.|||-|+..+..-+. .+...|.+++|+|+.+...+. ..|.++..++.- |.
T Consensus 85 ~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~-----~aGl~v~~Y~Yyd~~~~~~df 159 (396)
T COG1448 85 ADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFE-----AAGLEVETYPYYDAETKGLDF 159 (396)
T ss_pred CCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHH-----hcCCceeeeeccccccccccH
Confidence 43 14678999999999886553 345679999999998888774 267777655432 67
Q ss_pred HHHHHhhcc--CCceEEEEEcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc----------cCCCC-eE
Q 013210 176 EMVNSAIVQ--GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP----------ARLGA-DV 239 (447)
Q Consensus 176 ~~l~~~i~~--~~t~lV~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~----------~~~g~-di 239 (447)
+.+.+.+++ ++..++.-...+||||.-.. +++|+++.++++.+-++|-+|.+|.-.. ...+. -+
T Consensus 160 ~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~l 239 (396)
T COG1448 160 DGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELL 239 (396)
T ss_pred HHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEE
Confidence 777666633 23333344677999999875 6688899999999999999995553221 11122 68
Q ss_pred EEeCCCccccCCCCeeEEEEEc--ChHHHHHHHHHhhhhhhhcCCCccHH---HHHHHHcc-------CCcHHHHHHHHH
Q 013210 240 VVHSISKFISGGADIIAGAVCG--PANLVNSMMDLHQGALMLLGPTMNPK---VAFELSER-------IPHLGLRMKEHC 307 (447)
Q Consensus 240 ~~~S~sK~~g~~g~~igG~l~~--~~~~~~~l~~~~~~~~~~~g~~~~~~---~a~~~~~~-------~~~l~~~~~~~~ 307 (447)
++.|+||.||.-|.|+|++.+. +.+..+++........+..-++++.. .....+.. ..++....+++.
T Consensus 240 va~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~ 319 (396)
T COG1448 240 VASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRIL 319 (396)
T ss_pred EEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999665533 44555544332111111122222222 22222221 122445667788
Q ss_pred HHHHHHHHHHHhCC
Q 013210 308 HRALIFARRMKKLG 321 (447)
Q Consensus 308 ~~~~~l~~~L~~~~ 321 (447)
+.|+.|.+.|++.+
T Consensus 320 ~mR~~lv~~L~~~~ 333 (396)
T COG1448 320 EMRQALVDALKALG 333 (396)
T ss_pred HHHHHHHHHHHhhC
Confidence 88999999998853
No 348
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.63 E-value=6.8e-14 Score=132.45 Aligned_cols=225 Identities=13% Similarity=0.148 Sum_probs=147.2
Q ss_pred ccccCCCCchHHHHHHHHHHHh---CCCeEEEeCChHHHHHHHHHHhcCCC--C------eEEEeCCCchhH-HHHHHh-
Q 013210 91 FIYSRHFNPTVLNLSRQMAALE---GTEAAYCTASGMSAISSVLMQLCSSG--G------HVVAARTLYGGT-HALLTH- 157 (447)
Q Consensus 91 ~~~~r~~~~~~~~l~~~ia~l~---g~~~~~~tsggt~A~~~al~~l~~~g--d------~Vi~~~~~y~~~-~~~~~~- 157 (447)
|..+-+..-...++++.+.+.. .++.++|++|||+|+..||+...+.. + ++|.....||+- ...+..
T Consensus 90 hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~ 169 (433)
T KOG1401|consen 90 HSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVT 169 (433)
T ss_pred eccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhh
Confidence 3333333333567888888888 67889999999999999997654321 2 488888888764 333321
Q ss_pred hcCcccCe-------eEEEeCCCCHHHHHHhhcc--CCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCC
Q 013210 158 FFPRACNI-------TTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNT 224 (447)
Q Consensus 158 ~~~~~~g~-------~~~~v~~~d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~ 224 (447)
.... ++. .+.....+|..++++.++. +++.+|++|.++...|.++. +..|.++|+++|+++|.||+
T Consensus 170 ~~s~-y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV 248 (433)
T KOG1401|consen 170 GNSK-YGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEV 248 (433)
T ss_pred cccc-cCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehh
Confidence 1111 222 3444455699999998843 34799999999999888863 77899999999999999999
Q ss_pred CCCCCCCcc-----CCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhh--hhhhhcCCCccHHHHHHHHccCC
Q 013210 225 FSPLVLSPA-----RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ--GALMLLGPTMNPKVAFELSERIP 297 (447)
Q Consensus 225 ~~~~~~~~~-----~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~--~~~~~~g~~~~~~~a~~~~~~~~ 297 (447)
++++..... -+++...+.++.|.+++ |.++ |+..+++++.+.+....+ +..++.|+++...++...+..+.
T Consensus 249 ~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~g-GlPi-gA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~ 326 (433)
T KOG1401|consen 249 QTGLGRLGYGWAQEYFGVTPDITTVAKPLGG-GLPI-GATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELK 326 (433)
T ss_pred hhCccccchHHHHHHhCcCCcceeehhhccC-Ccee-EEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHc
Confidence 977543211 12444444449999995 5889 888888899888764322 13345566665555555554443
Q ss_pred cHHHHHHHHHHHHHHHHHHHHh
Q 013210 298 HLGLRMKEHCHRALIFARRMKK 319 (447)
Q Consensus 298 ~l~~~~~~~~~~~~~l~~~L~~ 319 (447)
+ .+..++..+..+.|++.|.+
T Consensus 327 ~-~e~~k~vs~~~k~L~~~l~e 347 (433)
T KOG1401|consen 327 D-PETLKNVSKIGKELRKLLDE 347 (433)
T ss_pred C-HHHHHHHHHHHHHHHHHHHH
Confidence 2 23334444444455555544
No 349
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.62 E-value=1.7e-13 Score=124.34 Aligned_cols=296 Identities=17% Similarity=0.212 Sum_probs=173.0
Q ss_pred chHHHHHHHHHHHhC----CCeEEEeCChHHHHHHHHHHhcC---CC--CeEEE-eCCCchhHHHHHHh--hcCcccCee
Q 013210 99 PTVLNLSRQMAALEG----TEAAYCTASGMSAISSVLMQLCS---SG--GHVVA-ARTLYGGTHALLTH--FFPRACNIT 166 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g----~~~~~~tsggt~A~~~al~~l~~---~g--d~Vi~-~~~~y~~~~~~~~~--~~~~~~g~~ 166 (447)
+.++.+.+.+.+-+| .+++.+|+|+..+...++..+.. .| ++|+. -.|+|-++....-. .+.. ..-+
T Consensus 78 ~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs-~kP~ 156 (417)
T COG3977 78 VLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVS-AKPN 156 (417)
T ss_pred HHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceee-ccCC
Confidence 344445555555455 35699999999999888765532 24 35555 45888777654310 0000 0001
Q ss_pred EEEeCC------CCHHHHHHhhccCCceEEEEEcCCCCCcccc---CHHHHHHHHHhcCCEEEEeCCC-CCCC---CC--
Q 013210 167 TTFVDI------SDHEMVNSAIVQGRTKVLYFESISNPTLAVA---NIPELSRLAHDKGVTVVVDNTF-SPLV---LS-- 231 (447)
Q Consensus 167 ~~~v~~------~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~---~l~~I~~la~~~gi~livD~~~-~~~~---~~-- 231 (447)
+..++. .|.+.|. + .+.+.+|++.-|.||||.|. .+.+|.++|++||+.+++|++| .+|+ ++
T Consensus 157 iel~~~g~FKY~vDF~~l~--i-~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~ 233 (417)
T COG3977 157 IELLPAGQFKYHVDFEHLH--I-GESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDA 233 (417)
T ss_pred cccccccceeeccCHHHcc--c-ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccc
Confidence 111111 1666665 3 57899999999999999997 3778888999999999999999 4453 22
Q ss_pred -ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC--CcHHHHH-H-HH
Q 013210 232 -PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI--PHLGLRM-K-EH 306 (447)
Q Consensus 232 -~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~--~~l~~~~-~-~~ 306 (447)
+.--...+.|.|+||. |.||.|+ |.+++++++++.+..... ......+.+.++.+..++..- ..+.+.+ + -+
T Consensus 234 ~~~w~~NiilC~SLSK~-GLPG~R~-GIiIane~viqaitnmn~-iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY 310 (417)
T COG3977 234 TPLWNENIILCMSLSKL-GLPGSRC-GIIIANEKVIQAITNMNG-IISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFY 310 (417)
T ss_pred cccCCCCEEEEeehhhc-CCCCcce-eEEEccHHHHHHHHhccc-eeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHH
Confidence 2222578999999995 6799998 999999999988876543 222444555565555544432 2222221 1 24
Q ss_pred HHHHHHHHHHHHhC-C---CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHhhccccccccccc
Q 013210 307 CHRALIFARRMKKL-G---LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYLQNYAQFGFMAVS 381 (447)
Q Consensus 307 ~~~~~~l~~~L~~~-~---~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~l~~~l~~~~~~g~~~vs 381 (447)
..+.+...+.|++. + ..+..|. ..-++|+.|++ +...+.+..+|+.+ |+ .+-
T Consensus 311 ~~~~q~~~~~l~~~lp~~~~~iHkpE-------------------GAIFlWLWf~dLPItt~~LYq~LKa~---Gv-l~V 367 (417)
T COG3977 311 RNRVQTTIAILRRYLPEYRCLIHKPE-------------------GAIFLWLWFKDLPITTEELYQRLKAR---GV-LMV 367 (417)
T ss_pred HHHHHHHHHHHHHhcCccceeeecCC-------------------cceeehhhhccCCCCHHHHHHHHHhC---eE-EEe
Confidence 55555555566542 2 2333332 11256667763 22356788888863 32 222
Q ss_pred ccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCC--CHHHHHHHHHHHHHHh
Q 013210 382 LGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLG--TLDQRWSQFEKALSRM 439 (447)
Q Consensus 382 ~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~--~~~~~i~~l~~al~~~ 439 (447)
-|.+.. |+ ++ ....-...++|+|.- .+ .++.-+..+.+.++++
T Consensus 368 PG~~FF----pG------l~----~ewpH~hqC~Rmn~~-~~~~~ie~Gva~lae~ve~~ 412 (417)
T COG3977 368 PGHYFF----PG------LD----KEWPHTHQCMRMNYV-PEPEKIEKGVAILAEEVERA 412 (417)
T ss_pred cccccC----CC------CC----CCCCCccceEEEecC-CCHHHHHHHHHHHHHHHHHH
Confidence 332211 11 11 001122468999988 43 3444455565555544
No 350
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.62 E-value=1.7e-13 Score=138.57 Aligned_cols=288 Identities=13% Similarity=0.165 Sum_probs=166.8
Q ss_pred CCchHHHHHHHHHHHh---CCCeEEEeCChHHHHHHHHHHhcC--------CC------CeEEEeCCCchhHHHHHHhhc
Q 013210 97 FNPTVLNLSRQMAALE---GTEAAYCTASGMSAISSVLMQLCS--------SG------GHVVAARTLYGGTHALLTHFF 159 (447)
Q Consensus 97 ~~~~~~~l~~~ia~l~---g~~~~~~tsggt~A~~~al~~l~~--------~g------d~Vi~~~~~y~~~~~~~~~~~ 159 (447)
.++...++.++|+++. +.+.++|++||+||+..|++.... .| .+||.....||+........-
T Consensus 90 ~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~ 169 (443)
T PRK08297 90 YTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLT 169 (443)
T ss_pred CCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhc
Confidence 3455667888888876 246799999999999999986521 12 579999999988754331110
Q ss_pred C-----c----ccC---eeEEEe--CC-------------CCHHHHHHhhc--cCCceEEEEEcCCCCCccccC----HH
Q 013210 160 P-----R----ACN---ITTTFV--DI-------------SDHEMVNSAIV--QGRTKVLYFESISNPTLAVAN----IP 206 (447)
Q Consensus 160 ~-----~----~~g---~~~~~v--~~-------------~d~~~l~~~i~--~~~t~lV~i~~~~NptG~v~~----l~ 206 (447)
. + ..+ +...++ +. .+++++++.+. .+++.+|++|.+....|.+.+ ++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~ 249 (443)
T PRK08297 170 NTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFA 249 (443)
T ss_pred CCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHH
Confidence 0 0 000 000001 10 02345556663 257899999999998898753 88
Q ss_pred HHHHHHHhcCCEEEEeCCCCCCCCCc-------cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHH-Hh---hh
Q 013210 207 ELSRLAHDKGVTVVVDNTFSPLVLSP-------ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMD-LH---QG 275 (447)
Q Consensus 207 ~I~~la~~~gi~livD~~~~~~~~~~-------~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~-~~---~~ 275 (447)
+|.++|++||+++|+||+++++.... .....|+++ ++|.++ ++|++.++ ++.+.+.. .. ..
T Consensus 250 ~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~-----~~a~l~~~-~i~~~~~~~~~~~~~~ 321 (443)
T PRK08297 250 AMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVA--FGKKTQ-----VCGIMAGR-RVDEVEDNVFAVSSRI 321 (443)
T ss_pred HHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEE--eccccc-----ccceecch-HHHHhhhhhccCcccc
Confidence 99999999999999999997663221 123467776 789984 33555554 33222111 10 11
Q ss_pred hhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013210 276 ALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 355 (447)
Q Consensus 276 ~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 355 (447)
..+..|+.++..++...+..++. ....++..++.+++.+.|++...+ +|.... ...|.|.++.++
T Consensus 322 ~~T~~gnpl~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~--~~~~~~------------~vrg~G~~~~i~ 386 (443)
T PRK08297 322 NSTWGGNLVDMVRARRILEVIEE-DGLVENAARQGEYLLARLEELAAE--FPAVVS------------NVRGRGLMCAFD 386 (443)
T ss_pred CCCCCccHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHH--CCCcce------------eeeccceEEEEE
Confidence 22233444444444444332221 123455566666666666553111 111100 112678899999
Q ss_pred eCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHH
Q 013210 356 METEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKA 435 (447)
Q Consensus 356 l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~a 435 (447)
+.+.+....+...+.. .|++. . |. ....+||++. ...+++.++.+.++
T Consensus 387 ~~~~~~~~~~~~~l~~---~Gvl~-~----------~~-----------------~~~~lr~~P~-l~~t~~eid~~l~~ 434 (443)
T PRK08297 387 LPTTADRDEVIRRLWE---EGVLV-L----------PC-----------------GERSIRFRPA-LTVTTEEIDAAIDA 434 (443)
T ss_pred ecCHHHHHHHHHHHHH---CCEEE-e----------cC-----------------CCCeEEEECC-ccCCHHHHHHHHHH
Confidence 9865555677777664 23321 1 10 1246899888 66666666666666
Q ss_pred HHHh
Q 013210 436 LSRM 439 (447)
Q Consensus 436 l~~~ 439 (447)
|++.
T Consensus 435 l~~~ 438 (443)
T PRK08297 435 LRRA 438 (443)
T ss_pred HHHH
Confidence 6544
No 351
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.60 E-value=7.2e-14 Score=126.72 Aligned_cols=264 Identities=24% Similarity=0.282 Sum_probs=179.0
Q ss_pred CCCCCccccCCCCchHHHHHHHHHHHhCCCeEEE---eCChHHHHHHHHHHhcCCCCeEEEeC-CCchhHHHHHH-----
Q 013210 86 PDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC---TASGMSAISSVLMQLCSSGGHVVAAR-TLYGGTHALLT----- 156 (447)
Q Consensus 86 ~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~---tsggt~A~~~al~~l~~~gd~Vi~~~-~~y~~~~~~~~----- 156 (447)
+++++|-|...+. +.|++..|+.+|+|..++ .-|||.|+..+|.++++|||+.+... --|....+.+.
T Consensus 55 ~~stGYGydD~GR---dtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~ 131 (416)
T COG4100 55 TGSTGYGYDDLGR---DTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEG 131 (416)
T ss_pred CCCCCCCccccch---hHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCC
Confidence 3455665554443 568899999999988655 35899999999999999999877544 33554444441
Q ss_pred -hhcCcccCeeEEEeCCC-----CHHHHHHhhccCCceEEEEE----cCCCCCccccCHHHHHHHHHhc--CCEEEEeCC
Q 013210 157 -HFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFE----SISNPTLAVANIPELSRLAHDK--GVTVVVDNT 224 (447)
Q Consensus 157 -~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~t~lV~i~----~~~NptG~v~~l~~I~~la~~~--gi~livD~~ 224 (447)
.-+.. +|+....++.. |.+.+..++ +++|++|.+. ...-|.-.+.+++++.++.|+. ++++.+|++
T Consensus 132 ~gSL~d-fgi~Y~~v~Lt~~gkiD~~~v~~~i-~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNC 209 (416)
T COG4100 132 QGSLKD-FGIKYKAVPLTADGKIDIQAVKTAI-SDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNC 209 (416)
T ss_pred cccHHH-hCcceeecccccCCcccHHHHHHhc-CccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 11112 46666666654 899999999 8999999986 3455777777888999998874 799999999
Q ss_pred CCCCC--CCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHH--hhhhhhhcCCCccHHHHHHHHccCCcHH
Q 013210 225 FSPLV--LSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDL--HQGALMLLGPTMNPKVAFELSERIPHLG 300 (447)
Q Consensus 225 ~~~~~--~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~--~~~~~~~~g~~~~~~~a~~~~~~~~~l~ 300 (447)
|+.|. ..|...|+|++.+|+-|.-|+.-...||++.++.++++..... ..+.+.-.|.++.+ .....+++---+
T Consensus 210 YGEFvE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~yRlTaPGIG~e~Gat~~~--l~~myqGlFlAP 287 (416)
T COG4100 210 YGEFVEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAYRLTAPGIGREGGATLYS--LREMYQGLFLAP 287 (416)
T ss_pred chhhhhccCccccchhhhccceeeCCCCceeeccceeechHHHHHhhceeeecCCccccccccHHH--HHHHHhhhccch
Confidence 98886 4577889999999999999987667899999999998765321 22222223333221 122222332223
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 301 LRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 301 ~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
....+-.+-+......|.+.+..++. . ...+. .--+-++.|.+.++..+|+.+++.
T Consensus 288 hvv~qa~Kga~fta~~le~lg~~~~P-~-~~~kR-------------tDlIQavkf~~~eKmIaFcqaiQ~ 343 (416)
T COG4100 288 HVVSQAVKGAHFTARFLEKLGFPVNP-K-YDAKR-------------TDLIQAVKFGSKEKMIAFCQAIQA 343 (416)
T ss_pred HHHHHHhhhhHHHHHHHHHcCCCCCC-c-ccccc-------------cchhhheecCCHHHHHHHHHHHhh
Confidence 34444455555566677777765442 1 11111 112667888888889999998874
No 352
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.60 E-value=8.5e-14 Score=140.31 Aligned_cols=286 Identities=14% Similarity=0.131 Sum_probs=165.8
Q ss_pred CCchHHHHHHHHHH----HhC--CCeEEEeCChHHHHHHHHHHhcC--------------------------CC---CeE
Q 013210 97 FNPTVLNLSRQMAA----LEG--TEAAYCTASGMSAISSVLMQLCS--------------------------SG---GHV 141 (447)
Q Consensus 97 ~~~~~~~l~~~ia~----l~g--~~~~~~tsggt~A~~~al~~l~~--------------------------~g---d~V 141 (447)
.++...++.+++++ +.. .+.++|++||+||+..|++.... +| .+|
T Consensus 99 ~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~i 178 (464)
T TIGR00699 99 GNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSI 178 (464)
T ss_pred CcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEE
Confidence 44444556666543 443 36799999999999999986521 11 279
Q ss_pred EEeCCCchhHHHHHHhhcC----cccCe---eEEEeCC-------------------CCHHHHHHhhcc--CCceEEEEE
Q 013210 142 VAARTLYGGTHALLTHFFP----RACNI---TTTFVDI-------------------SDHEMVNSAIVQ--GRTKVLYFE 193 (447)
Q Consensus 142 i~~~~~y~~~~~~~~~~~~----~~~g~---~~~~v~~-------------------~d~~~l~~~i~~--~~t~lV~i~ 193 (447)
|.....||+.......... ...+. .+.+++. .+++.++++++. +++.+|++|
T Consensus 179 i~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~E 258 (464)
T TIGR00699 179 LSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVE 258 (464)
T ss_pred EEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEe
Confidence 9999999886543311110 00010 1111111 135567777732 468999999
Q ss_pred cCCCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----cCCC----CeEEEeCCCccccCCCCeeEEEEE
Q 013210 194 SISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLSP-----ARLG----ADVVVHSISKFISGGADIIAGAVC 260 (447)
Q Consensus 194 ~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~~-----~~~g----~di~~~S~sK~~g~~g~~igG~l~ 260 (447)
.+....|.+.+ +++|.++|++||+++|+||+++++.... ..+| .|+++ ++|.+|+. |+++
T Consensus 259 Pv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t--~gK~lg~g-----G~~~ 331 (464)
T TIGR00699 259 PIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVT--FSKKFQTA-----GYFF 331 (464)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEE--ehhhhccC-----Cccc
Confidence 99999999987 9999999999999999999996653211 1123 67755 89999643 3333
Q ss_pred cChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC-CCCCchhHHHH
Q 013210 261 GPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPG-LEDHPHHELLK 339 (447)
Q Consensus 261 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~-~~~~p~~~l~~ 339 (447)
.++ .+....... ...+..|+..+..++.+.+..++. ....++..+..++|.+.|++...+ +|. +.
T Consensus 332 ~~~-~~~~~~~~~-~~~T~~gnp~~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~--~~~~i~--------- 397 (464)
T TIGR00699 332 HDP-AFRPNKPYR-QFNTWMGDPSRALILREIIQEIKR-KDLLENVAHVGDYLYTGLEDLQKK--YPEFIQ--------- 397 (464)
T ss_pred cch-hccCCCCcc-cccCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHh--CCCcee---------
Confidence 332 111101111 122234444444444433333211 113344455555666666543111 110 00
Q ss_pred HHhccCC--CcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEE
Q 013210 340 SMANKEY--GFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRM 417 (447)
Q Consensus 340 ~~~~~~~--g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRi 417 (447)
+.. |.|.++.+++++...+..+.+.+.. .|++. .. ...+.|||
T Consensus 398 ----~vRg~G~Glm~gie~~~~~~~~~i~~~~~~---~Gvl~-~~---------------------------~g~~~ir~ 442 (464)
T TIGR00699 398 ----NLRGKGRGTFIAWDTPDEAKRDKLLKKARN---NGVNI-GG---------------------------CGVKAIRL 442 (464)
T ss_pred ----eecccCeEEEEEEecCCHHHHHHHHHHHHH---CCcEE-ec---------------------------CCCCeEEE
Confidence 111 5788999999865556777777765 23321 10 01367999
Q ss_pred EeCCCCCHHHHHHHHHHHHHHh
Q 013210 418 SVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 418 S~g~~~~~~~~i~~l~~al~~~ 439 (447)
++. ...+++.|+.+.++|++.
T Consensus 443 ~Pp-l~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 443 RPM-LVFQKHHADIFLEIISKI 463 (464)
T ss_pred eCC-CCCCHHHHHHHHHHHHHh
Confidence 999 888888888888777653
No 353
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.57 E-value=1.1e-13 Score=135.43 Aligned_cols=219 Identities=16% Similarity=0.203 Sum_probs=140.9
Q ss_pred cCCCCchHHHHHHHHHHHh--CCCeEEEeCChHHHHHHHHHHhc-------C-CCCeEEEeCCCchhHHHHHHh------
Q 013210 94 SRHFNPTVLNLSRQMAALE--GTEAAYCTASGMSAISSVLMQLC-------S-SGGHVVAARTLYGGTHALLTH------ 157 (447)
Q Consensus 94 ~r~~~~~~~~l~~~ia~l~--g~~~~~~tsggt~A~~~al~~l~-------~-~gd~Vi~~~~~y~~~~~~~~~------ 157 (447)
....++...++.++|.++. +.+.++|++||++|+..|++... . ...+|+.....||+.......
T Consensus 54 ~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~ 133 (339)
T PF00202_consen 54 SGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPP 133 (339)
T ss_dssp TTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTH
T ss_pred cceeccchhhhhhhhhhccccccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCcc
Confidence 3455677788999999998 55779999999999999998655 1 236899999999874322211
Q ss_pred ---hcCcccCeeEEEeCCCCHHH----------HHHh---hccCCceEEEEEcCCCCCccccC----HHHHHHHHHhcCC
Q 013210 158 ---FFPRACNITTTFVDISDHEM----------VNSA---IVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGV 217 (447)
Q Consensus 158 ---~~~~~~g~~~~~v~~~d~~~----------l~~~---i~~~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi 217 (447)
.... ....+..+|..++.. +++. ...+++.+|++|.++...|.+.+ +++|.++|++||+
T Consensus 134 ~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gi 212 (339)
T PF00202_consen 134 YRKGFGP-LYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGI 212 (339)
T ss_dssp HHTTTCS-SSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-
T ss_pred ccccccc-cccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehccccccccc
Confidence 1111 122456667776555 2222 22567899999999988887753 8999999999999
Q ss_pred EEEEeCCCCCCCCC-------ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHH
Q 013210 218 TVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAF 290 (447)
Q Consensus 218 ~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~ 290 (447)
++|+||+++++... ...+..|+++ ++|.+++. .++ |+++.++++.+.+..... ..+..+++.+..++.
T Consensus 213 llI~DEV~tG~gRtG~~~a~~~~gv~PDiv~--~gK~l~gG-~p~-sav~~~~~i~~~~~~~~~-~~T~~g~p~~~aaa~ 287 (339)
T PF00202_consen 213 LLIADEVQTGFGRTGKFFASEHYGVDPDIVT--FGKGLGGG-LPI-SAVLGSEEIMEAFQPGSH-GSTFGGNPLSCAAAL 287 (339)
T ss_dssp EEEEEETTTTTTTTSSSSGHHHHTSSSSEEE--EEGGGGTT-SSE-EEEEEEHHHHTTSCTTSS-TCTTTT-HHHHHHHH
T ss_pred ceecccccccccccCCccceecccccCcccc--cccchhhh-hhc-ccccccchhhcccccccc-ccccccchHhhhhhh
Confidence 99999999766321 1233578888 56999964 888 888888888776643322 222444444444444
Q ss_pred HHHccCCcHHHHHHHHHHHHHHHHHHHHh
Q 013210 291 ELSERIPHLGLRMKEHCHRALIFARRMKK 319 (447)
Q Consensus 291 ~~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 319 (447)
..+..++. ....++..+..++|.+.|++
T Consensus 288 ~~l~~~~~-~~~~~~~~~~g~~l~~~L~~ 315 (339)
T PF00202_consen 288 ATLEILEE-EDLLERVRELGERLREGLRE 315 (339)
T ss_dssp HHHHHHHH-TTHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhhcc-HHHHHHHHHHHHHHHHHHHH
Confidence 44433322 11233445555555555543
No 354
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.56 E-value=6.5e-13 Score=141.54 Aligned_cols=197 Identities=14% Similarity=0.165 Sum_probs=123.2
Q ss_pred CCCchHHHHHHHHHHHhC---CCeEEEeCChHHHHHHHHHHhcC---------------------CCCeEEEeCCCchhH
Q 013210 96 HFNPTVLNLSRQMAALEG---TEAAYCTASGMSAISSVLMQLCS---------------------SGGHVVAARTLYGGT 151 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g---~~~~~~tsggt~A~~~al~~l~~---------------------~gd~Vi~~~~~y~~~ 151 (447)
..++...+|.++|++..+ .+.++|++||++|+..|++...+ ...+||.....||+.
T Consensus 406 ~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~ 485 (817)
T PLN02974 406 NVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGD 485 (817)
T ss_pred cCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCC
Confidence 455666778888888765 35799999999999999975421 124699999998874
Q ss_pred HH-HHHhh----------cCccc--CeeE----EE---------eCCC-------------------------------C
Q 013210 152 HA-LLTHF----------FPRAC--NITT----TF---------VDIS-------------------------------D 174 (447)
Q Consensus 152 ~~-~~~~~----------~~~~~--g~~~----~~---------v~~~-------------------------------d 174 (447)
.. .+... .+... +..+ .+ ++.. .
T Consensus 486 T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~ 565 (817)
T PLN02974 486 TLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAY 565 (817)
T ss_pred CHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhhhHHH
Confidence 32 22100 00000 0000 00 0000 0
Q ss_pred HHHHHHhhc-------cCCceEEEEEcC-CCCCccccC----HHHHHHHHHhcCCEEEEeCCCCCCCC-----CccCCC-
Q 013210 175 HEMVNSAIV-------QGRTKVLYFESI-SNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVL-----SPARLG- 236 (447)
Q Consensus 175 ~~~l~~~i~-------~~~t~lV~i~~~-~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~-----~~~~~g- 236 (447)
.+.+++.++ .+++.+|++|.+ +...|.+.+ +++|.++|++||+++|+||+++++.. ....+|
T Consensus 566 ~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv 645 (817)
T PLN02974 566 RSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGC 645 (817)
T ss_pred HHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCC
Confidence 144666553 146889999995 777888864 88999999999999999999977632 122234
Q ss_pred -CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHh-----hhhhhhcCCCccHHHHHHHHcc
Q 013210 237 -ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH-----QGALMLLGPTMNPKVAFELSER 295 (447)
Q Consensus 237 -~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~-----~~~~~~~g~~~~~~~a~~~~~~ 295 (447)
.|+++ ++|.+++.-.++ |++++++++.+.+.... .+..+..|+.++..+|.+.+..
T Consensus 646 ~PDIi~--~gKgLtgG~~Pl-aa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~ 707 (817)
T PLN02974 646 KPDIAC--YAKLLTGGLVPL-AATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQW 707 (817)
T ss_pred CCCEEe--ecccccCCCCcc-EEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHH
Confidence 56666 899999532577 88888999988774210 1123345555555555544443
No 355
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.56 E-value=6.9e-13 Score=129.53 Aligned_cols=246 Identities=15% Similarity=0.081 Sum_probs=153.5
Q ss_pred cccccc-cCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC-CCCeE
Q 013210 64 ASATFT-VMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCS-SGGHV 141 (447)
Q Consensus 64 ~att~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~-~gd~V 141 (447)
.|.|-+ .|+.++..+++.+ ...|+ .+|++.+|++.+++++|.+.+++|.+|..+...+++.+++ +|+.+
T Consensus 47 rSDTgT~apS~~m~aAM~~G-------DD~Y~--gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~~~g~e~ 117 (467)
T TIGR02617 47 LTDSGTGAVTQSMQAAMMRG-------DEAYS--GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEK 117 (467)
T ss_pred ccCCCCCCCCHHHHHHHHcC-------Ccccc--cCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhcccccccc
Confidence 677777 4777776677653 23455 5788899999999999999999999999999999999888 56655
Q ss_pred EEeC--------CCchhHHHHHHhhcCcccCeeEEEe------------C--C-CCHHHHHHhhcc---CCceEEEEEcC
Q 013210 142 VAAR--------TLYGGTHALLTHFFPRACNITTTFV------------D--I-SDHEMVNSAIVQ---GRTKVLYFESI 195 (447)
Q Consensus 142 i~~~--------~~y~~~~~~~~~~~~~~~g~~~~~v------------~--~-~d~~~l~~~i~~---~~t~lV~i~~~ 195 (447)
++.. ..|..+..... ..|+.+..+ + . .|+++|+++|+. ++...+.+.-.
T Consensus 118 g~~~~~~~v~hn~~fett~g~a~-----l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt 192 (467)
T TIGR02617 118 GLDRSKMVAFSNYFFDTTQGHSQ-----INGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATIT 192 (467)
T ss_pred cccccccccceEEEEecchHHHH-----HcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEE
Confidence 5333 22332221211 135443332 1 1 189999999943 23344444333
Q ss_pred CCC-CccccC---HHHHHHHHHhcCCEEEEeCCC----CCC---------CCCccC------CCCeEEEeCCCccccCCC
Q 013210 196 SNP-TLAVAN---IPELSRLAHDKGVTVVVDNTF----SPL---------VLSPAR------LGADVVVHSISKFISGGA 252 (447)
Q Consensus 196 ~Np-tG~v~~---l~~I~~la~~~gi~livD~~~----~~~---------~~~~~~------~g~di~~~S~sK~~g~~g 252 (447)
+|- .|.+.+ ++++.++|++||+.+|+|.+- +.+ ..++.+ -.+|.++.|++|-++.|
T Consensus 193 ~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgAp- 271 (467)
T TIGR02617 193 CNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVP- 271 (467)
T ss_pred EecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCc-
Confidence 444 456665 668899999999999999863 111 112221 25899999999999977
Q ss_pred CeeEEEEEcChH----HHHHHHHHh---hhhhhhcCCCccHHHHHHHHccCCc--HHHHHHHHHHHHHHHHHHHHhCCCe
Q 013210 253 DIIAGAVCGPAN----LVNSMMDLH---QGALMLLGPTMNPKVAFELSERIPH--LGLRMKEHCHRALIFARRMKKLGLK 323 (447)
Q Consensus 253 ~~igG~l~~~~~----~~~~l~~~~---~~~~~~~g~~~~~~~a~~~~~~~~~--l~~~~~~~~~~~~~l~~~L~~~~~~ 323 (447)
+||+++++++ +.++++... .++.+.. .++.....++..++.+ -...++......++|.+.|.+.|..
T Consensus 272 --vGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYG--Glagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~~Gvp 347 (467)
T TIGR02617 272 --MGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYG--GLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEEIGVV 347 (467)
T ss_pred --ccceEEecchhHHHHHHHHHhhcccccCCcCcC--chhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 6799988654 333333221 1222222 3333333333333322 1233444456677889999998875
Q ss_pred eeCCC
Q 013210 324 VLYPG 328 (447)
Q Consensus 324 v~~p~ 328 (447)
+..++
T Consensus 348 i~~~G 352 (467)
T TIGR02617 348 CQQAG 352 (467)
T ss_pred EEecC
Confidence 54343
No 356
>PRK15029 arginine decarboxylase; Provisional
Probab=99.56 E-value=2.4e-13 Score=142.76 Aligned_cols=155 Identities=13% Similarity=0.080 Sum_probs=124.3
Q ss_pred CchHHHHHHHHHHHhCCCeE-EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC---
Q 013210 98 NPTVLNLSRQMAALEGTEAA-YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~-~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 173 (447)
...+.++++..|+++|++.. ++++|.|.+|.+++++++++||+|++...+|.+++..+. +.|+.++|+.+.
T Consensus 204 ~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~-----L~ga~Pvyl~P~~~~ 278 (755)
T PRK15029 204 TGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLI-----LTGAKPVYMVPSRNR 278 (755)
T ss_pred CcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHH-----HcCCeEEEecccccc
Confidence 34578999999999999875 567888999999999999999999999999999988773 368888887532
Q ss_pred -------C-----HHHHHHhhcc-CCce--------EEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCC
Q 013210 174 -------D-----HEMVNSAIVQ-GRTK--------VLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLS 231 (447)
Q Consensus 174 -------d-----~~~l~~~i~~-~~t~--------lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~ 231 (447)
+ ++.++++++. +.++ +|++++|+. .|.+.++++|+++|+++|+++++||+| +++.+.
T Consensus 279 ~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~ 357 (755)
T PRK15029 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFN 357 (755)
T ss_pred cCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECccccccccC
Confidence 3 8889888832 3344 899988864 699999999999999999999999999 444332
Q ss_pred -------cc-----C-CCCe-EEEeCCCccccCCCCeeEEEEE
Q 013210 232 -------PA-----R-LGAD-VVVHSISKFISGGADIIAGAVC 260 (447)
Q Consensus 232 -------~~-----~-~g~d-i~~~S~sK~~g~~g~~igG~l~ 260 (447)
.. . .|+| +++.|.||.+++ ...++++-
T Consensus 358 ~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a--lTQaS~LH 398 (755)
T PRK15029 358 PIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA--LSQASYIH 398 (755)
T ss_pred ccccccccccccccccCCCceEEEEchhhcccc--hhhhhhhe
Confidence 22 2 5788 999999999974 34445553
No 357
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.53 E-value=2.4e-13 Score=134.12 Aligned_cols=223 Identities=16% Similarity=0.184 Sum_probs=142.3
Q ss_pred CCchHHHHHHH----HHHHhCCC---------eEEEeCChHHHHHHHHHHhcC--------CC-----C-eEEEeCCCch
Q 013210 97 FNPTVLNLSRQ----MAALEGTE---------AAYCTASGMSAISSVLMQLCS--------SG-----G-HVVAARTLYG 149 (447)
Q Consensus 97 ~~~~~~~l~~~----ia~l~g~~---------~~~~tsggt~A~~~al~~l~~--------~g-----d-~Vi~~~~~y~ 149 (447)
..|...++|+. +++++|.+ ..+||+|||+||..++.+... .| + .|++++..|.
T Consensus 73 ~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~ 152 (373)
T PF00282_consen 73 ASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHY 152 (373)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-T
T ss_pred cccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccccc
Confidence 45665566655 55566655 379999999999988865421 12 2 5778888898
Q ss_pred hHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhcc----CCce-EEEEEcCCCCCccccCHHHHHHHHHhcCCEE
Q 013210 150 GTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQ----GRTK-VLYFESISNPTLAVANIPELSRLAHDKGVTV 219 (447)
Q Consensus 150 ~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~----~~t~-lV~i~~~~NptG~v~~l~~I~~la~~~gi~l 219 (447)
+....+. .+|+.++.++.+ |+++|++++++ ..+. +|+....+..+|.+-|+++|+++|+++++++
T Consensus 153 S~~Kaa~-----~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wl 227 (373)
T PF00282_consen 153 SIEKAAR-----ILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWL 227 (373)
T ss_dssp HHHHHHH-----HTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EE
T ss_pred HHHHhcc-----eeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceee
Confidence 8887772 356667777665 78888887732 2233 5666778889999999999999999999999
Q ss_pred EEeCCCCC-CCCCc----cCC---CCeEEEeCCCccccCCCCeeEEEE-EcChHHHHHHHHHhhhhhh------------
Q 013210 220 VVDNTFSP-LVLSP----ARL---GADVVVHSISKFISGGADIIAGAV-CGPANLVNSMMDLHQGALM------------ 278 (447)
Q Consensus 220 ivD~~~~~-~~~~~----~~~---g~di~~~S~sK~~g~~g~~igG~l-~~~~~~~~~l~~~~~~~~~------------ 278 (447)
|+|++|++ ..+.+ ... .+|-++.++||+++.|-. . |++ +.++..+.........+..
T Consensus 228 HVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~-~-~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~ 305 (373)
T PF00282_consen 228 HVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYG-C-GVLLVRDKSDLRDAFSINADYLGNDDRESDESYDY 305 (373)
T ss_dssp EEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS---EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCE
T ss_pred eecccccccccccccccccccccccccccccchhhhhcCCcc-c-eeEEeecccchHHHhccChhhhccccccccccccc
Confidence 99999965 22211 111 589999999999998765 3 665 4455444322100000000
Q ss_pred ----hcCCC-ccHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCC-eeeC
Q 013210 279 ----LLGPT-MNPKVAFELSE--RIPHLGLRMKEHCHRALIFARRMKKLGL-KVLY 326 (447)
Q Consensus 279 ----~~g~~-~~~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~ 326 (447)
..++. ......|..++ +.+.+.+++++..++++++.+.|++.+. ++..
T Consensus 306 ~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~ 361 (373)
T PF00282_consen 306 GDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVN 361 (373)
T ss_dssp EEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESS
T ss_pred ccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 01111 12233444443 3455778899999999999999999875 5544
No 358
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.53 E-value=2.8e-13 Score=136.66 Aligned_cols=165 Identities=15% Similarity=0.187 Sum_probs=107.0
Q ss_pred HHHHHHHHHHhC-CCeEEEeCChHHHHHHHHHHhc-CCCC-eEEEe-CCCchhHHHHHHhhcCcccCe------eEEEeC
Q 013210 102 LNLSRQMAALEG-TEAAYCTASGMSAISSVLMQLC-SSGG-HVVAA-RTLYGGTHALLTHFFPRACNI------TTTFVD 171 (447)
Q Consensus 102 ~~l~~~ia~l~g-~~~~~~tsggt~A~~~al~~l~-~~gd-~Vi~~-~~~y~~~~~~~~~~~~~~~g~------~~~~v~ 171 (447)
.++.++|+++.. .+.++|++||+||+..|++... -.|+ +|+.. ...|++.............+. .+..++
T Consensus 91 ~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 170 (431)
T PRK06209 91 LDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR 170 (431)
T ss_pred HHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC
Confidence 357788888764 5789999999999999998542 2343 55555 344443221110000000111 133445
Q ss_pred CCCHHHHHHhhcc--CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCc---c-CCCCeEEEeCCC
Q 013210 172 ISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSP---A-RLGADVVVHSIS 245 (447)
Q Consensus 172 ~~d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~---~-~~g~di~~~S~s 245 (447)
..|+++|++.++. +++.+|++|++....+....+++|.++|++||+++|+||+++++.... . .+++..-+.+++
T Consensus 171 ~~d~~~l~~~l~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~PDi~t~g 250 (431)
T PRK06209 171 YNDIASLEALFEDHPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPDLSCFG 250 (431)
T ss_pred CCCHHHHHHHHHhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCcceeeeh
Confidence 5689999988832 357899999887653333359999999999999999999996654321 1 123333335589
Q ss_pred ccccCCCCeeEEEEEcChHHHHH
Q 013210 246 KFISGGADIIAGAVCGPANLVNS 268 (447)
Q Consensus 246 K~~g~~g~~igG~l~~~~~~~~~ 268 (447)
|.+|+ |..+ |++++++++++.
T Consensus 251 K~lgg-G~p~-~av~~~~~i~~~ 271 (431)
T PRK06209 251 KALGN-GFAV-SALAGKREYMEL 271 (431)
T ss_pred hhhcC-Cccc-EEEEEHHHHHhh
Confidence 99995 5655 888888888775
No 359
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.51 E-value=5.8e-12 Score=123.72 Aligned_cols=285 Identities=14% Similarity=0.094 Sum_probs=177.5
Q ss_pred CCCchHHHHHHHHHHHhCCC--e--EEEeCChHHHHHHHHHHhc-CCCCeEEEeCCCchhHHHHHHhhcCcccCe-eEEE
Q 013210 96 HFNPTVLNLSRQMAALEGTE--A--AYCTASGMSAISSVLMQLC-SSGGHVVAARTLYGGTHALLTHFFPRACNI-TTTF 169 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g~~--~--~~~tsggt~A~~~al~~l~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~-~~~~ 169 (447)
.......+.++.+.++++.+ . +++++|||.++.+++..++ ++|++|++.. .|+.-.. .....+ .|+ ++..
T Consensus 36 ~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~--~eia~~-~g~~~v~~ 111 (374)
T TIGR01365 36 LGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWV--TDVTKQ-LKLPDVRV 111 (374)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHH--HHHHHh-cCCCCcEE
Confidence 33456678888999999853 2 5779999999999999998 4788888764 4433211 022233 566 3555
Q ss_pred eCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEe
Q 013210 170 VDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVH 242 (447)
Q Consensus 170 v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~ 242 (447)
++.. ++++++. +. .|++.+.-..||...|+++|.+.+ +++++++|.+- +..+++.. ++|+++.
T Consensus 112 l~~~~g~~~~~~~ve~---~~---~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d--~iDv~~t 181 (374)
T TIGR01365 112 LEAEYGKLPDLKKVDF---KN---DVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH--KLDVVTF 181 (374)
T ss_pred EcCCCCCCCCHHHcCC---CC---CEEEecCCCchheecccccccccc--CCCcEEEEccchhcCCCCChh--HCcEEEE
Confidence 5433 7777762 21 255666667789999997766332 58999999985 44444444 4999999
Q ss_pred CCCccccCCCCeeEEEEEcChHHHHHHHHHh---------h---------h-hhhhcCCCccHHHHHHHHccC------C
Q 013210 243 SISKFISGGADIIAGAVCGPANLVNSMMDLH---------Q---------G-ALMLLGPTMNPKVAFELSERI------P 297 (447)
Q Consensus 243 S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~---------~---------~-~~~~~g~~~~~~~a~~~~~~~------~ 297 (447)
|..|.+++|+. + ++++.+++.+++..... . . ....+..+++....+++...+ .
T Consensus 182 gsQK~L~~ppG-l-s~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~eg 259 (374)
T TIGR01365 182 SWQKVLGGEGA-H-GMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIG 259 (374)
T ss_pred echhccCCCCc-e-EEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHcc
Confidence 99999998875 3 78888887776654210 0 0 000122232322222222211 2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHH------H-----HHHH
Q 013210 298 HLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEE------K-----ANRL 365 (447)
Q Consensus 298 ~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~------~-----~~~l 365 (447)
.+..+.+++.++++.+++++++.| ..+.... +.. ..-.++.+.++.+. + ...|
T Consensus 260 Gle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~-~~~--------------rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~ 324 (374)
T TIGR01365 260 GLKPLIARADDNLAVLEAFVAKNNWIHFLAET-PEI--------------RSNTSVCLKVVDPAIDALDEDAQADFAKEL 324 (374)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCcccCCCC-hhh--------------cCCCeEEEEeCCccccccccchhhHHHHHH
Confidence 478899999999999999999998 4433211 110 01126777775321 2 4667
Q ss_pred HHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 366 MNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 366 ~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
.+.|+.. | +.+..|.. ...+..+||... -+-..+.++.|.++|+-+
T Consensus 325 ~~~l~~~---g-i~i~~G~~-----------------------~~~~~~fRIg~~-G~i~~~di~~l~~~l~~~ 370 (374)
T TIGR01365 325 ISTLEKE---G-VAYDIGSY-----------------------RDAPSGLRIWCG-ATVEKSDLECLCPWLDWA 370 (374)
T ss_pred HHHHHHC---C-EEEecccc-----------------------ccCCCceEEecC-CcCCHHHHHHHHHHHHHH
Confidence 7777752 3 34443311 011367999755 566677788888888754
No 360
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.51 E-value=4.7e-12 Score=116.50 Aligned_cols=282 Identities=16% Similarity=0.168 Sum_probs=178.3
Q ss_pred HHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCC-chhHHHHHHhhcCccc--CeeEEEeCCCC
Q 013210 102 LNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLC--SSGGHVVAARTL-YGGTHALLTHFFPRAC--NITTTFVDISD 174 (447)
Q Consensus 102 ~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~-y~~~~~~~~~~~~~~~--g~~~~~v~~~d 174 (447)
+.+-.++|-++|+. +++++.|.+--++.+|.+.+ ++|+.||+++-. |+.-...+..... .. |.++.. .+.
T Consensus 79 ~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~-~~~~~~~~~~--~~~ 155 (407)
T COG3844 79 ERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLAD-LLGIGYDLEG--VIA 155 (407)
T ss_pred hHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhh-hhccccccee--eeC
Confidence 56788899999974 48888877777777776654 348888888754 3332222211111 12 223332 247
Q ss_pred HHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccC-C
Q 013210 175 HEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISG-G 251 (447)
Q Consensus 175 ~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~-~ 251 (447)
++++++++ ++++.+|++.+++.-||...|+.+|-+++|++|++++-|-+| +.++.+....|+|+.+.|.+|++++ |
T Consensus 156 P~~~~~~~-~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGP 234 (407)
T COG3844 156 PRALEEAI-TDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGP 234 (407)
T ss_pred hHHHHHhh-ccceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCC
Confidence 78999999 889999999999999999999999999999999999999999 5566777777999999999999974 5
Q ss_pred CCeeEEEEEcChHHHHH----HHHH---------------hhhhhhhcCCCccHHHHHHHHccC-----CcHHHHHHHHH
Q 013210 252 ADIIAGAVCGPANLVNS----MMDL---------------HQGALMLLGPTMNPKVAFELSERI-----PHLGLRMKEHC 307 (447)
Q Consensus 252 g~~igG~l~~~~~~~~~----l~~~---------------~~~~~~~~g~~~~~~~a~~~~~~~-----~~l~~~~~~~~ 307 (447)
|. + +++...++..++ +..+ ..+...+..++.+......+.-.+ -.+.+..++-.
T Consensus 235 Ga-p-a~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSl 312 (407)
T COG3844 235 GA-P-AGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSL 312 (407)
T ss_pred CC-c-eeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhh
Confidence 54 5 444443332222 1110 001111111222222222211122 12455556667
Q ss_pred HHHHHHHHHHHhC----CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccc
Q 013210 308 HRALIFARRMKKL----GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLG 383 (447)
Q Consensus 308 ~~~~~l~~~L~~~----~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G 383 (447)
.+.+++.+.++.+ ++.+..|.. +. -.|+-+++..+. +.+++.+|..+ |++ |
T Consensus 313 aLTd~fieLvEa~~~~~~l~l~tPr~--~~-------------~rGsqvS~~hp~---~~~V~qaLi~r---GVi----g 367 (407)
T COG3844 313 ALTDYFIELVEARCEYYGLTLVTPRA--HE-------------ERGSQVSLYHPH---GYQVMQALIDR---GVI----G 367 (407)
T ss_pred HHHHHHHHHHHhccccCCcEEeccch--hh-------------hccceeeEecCc---HHHHHHHHHHc---Ccc----c
Confidence 7778888877654 335555541 11 368899999874 45667777653 322 2
Q ss_pred CccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC-----CCHHHHHHHHHHHHHHh
Q 013210 384 YYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL-----GTLDQRWSQFEKALSRM 439 (447)
Q Consensus 384 ~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~-----~~~~~~i~~l~~al~~~ 439 (447)
++ ..++.||+.+. . .|+-+.++.|.++|++.
T Consensus 368 D~------------------------R~P~vlRfgft-PlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 368 DF------------------------REPDVLRFGFT-PLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred cc------------------------cCCCeeeecCc-cceechhHHHHHHHHHHHHHHhh
Confidence 11 12577888876 4 56666677777777654
No 361
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.50 E-value=7.1e-12 Score=130.57 Aligned_cols=154 Identities=14% Similarity=0.150 Sum_probs=120.6
Q ss_pred chHHHHHHHHHHHhCCCeE-EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHH-HHhhcCcccCeeEEEeCCC---
Q 013210 99 PTVLNLSRQMAALEGTEAA-YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHAL-LTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~~~-~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~-~~~~~~~~~g~~~~~v~~~--- 173 (447)
....++++..|+++|++.. ++++|.|.+|.+++++++.+||.|++...+|.+.+.. +. +.|+.++|+.+.
T Consensus 174 G~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLi-----LsGa~PVYl~P~~n~ 248 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALI-----QAGATPVYLETARNP 248 (720)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHH-----HcCCeEEEeeccccc
Confidence 4568999999999999885 5678889999999999999999999999999998874 42 368888876542
Q ss_pred -------C-----HHHHHHhhccC--C-------ceEEEEEcCCCCCccccCHHHHHHH-HHhcCCEEEEeCCC-CCCCC
Q 013210 174 -------D-----HEMVNSAIVQG--R-------TKVLYFESISNPTLAVANIPELSRL-AHDKGVTVVVDNTF-SPLVL 230 (447)
Q Consensus 174 -------d-----~~~l~~~i~~~--~-------t~lV~i~~~~NptG~v~~l~~I~~l-a~~~gi~livD~~~-~~~~~ 230 (447)
+ .+.|++++++. + .+++++++|+. .|.+.++++|+++ ++.++ ++++||+| +.+.+
T Consensus 249 ~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F 326 (720)
T PRK13578 249 FGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQF 326 (720)
T ss_pred cCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCC-cEEEeCcchhhhcc
Confidence 3 45588877432 1 58899988764 6999999999998 68888 99999999 55544
Q ss_pred Cc---------cCCCCe----EEEeCCCccccCCCCeeEEEEEc
Q 013210 231 SP---------ARLGAD----VVVHSISKFISGGADIIAGAVCG 261 (447)
Q Consensus 231 ~~---------~~~g~d----i~~~S~sK~~g~~g~~igG~l~~ 261 (447)
.+ .+.|+| +++.|.||.+++= .-++++-.
T Consensus 327 ~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~al--TQaS~LHv 368 (720)
T PRK13578 327 IPMMADCSPLLLELNENDPGIFVTQSVHKQQAGF--SQTSQIHK 368 (720)
T ss_pred CcccccCChhhhhcCCCCCCeEEEEChhhcchhh--hhHhhhhc
Confidence 44 245889 9999999999743 34455533
No 362
>PLN02452 phosphoserine transaminase
Probab=99.48 E-value=5.4e-12 Score=123.86 Aligned_cols=282 Identities=12% Similarity=0.066 Sum_probs=179.1
Q ss_pred CchHHHHHHHHHHHhCCC---e-EEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEe---
Q 013210 98 NPTVLNLSRQMAALEGTE---A-AYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV--- 170 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~---~-~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v--- 170 (447)
....+++++.+.++++.+ . +++..|||.++.+++..++.+|+++++....+-+-. +.+...+ .|......
T Consensus 51 ~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r--~~~~a~~-~g~~~~~~~~~ 127 (365)
T PLN02452 51 LSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKK--AAKEAKK-YCKTNVIASGK 127 (365)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHH-hCCCcEEEecC
Confidence 356788999999999863 2 455689999999999999989988777665543332 2122223 44332222
Q ss_pred C-----CCCHHHHHHhhccCCceEEEEEcCCCCCcc-ccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEe
Q 013210 171 D-----ISDHEMVNSAIVQGRTKVLYFESISNPTLA-VANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVH 242 (447)
Q Consensus 171 ~-----~~d~~~l~~~i~~~~t~lV~i~~~~NptG~-v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~ 242 (447)
+ ..++++++ . .++.+.|.+++....+|+ ..|++++. ++++++|.++ +..+++..++++|+ .
T Consensus 128 ~~~~~~~~~~~~~~--~-~~~~~~v~~~hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~v~~--~ 196 (365)
T PLN02452 128 DEKYTKIPSVSEWE--L-TPDAKFVHICANETIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYGVIY--A 196 (365)
T ss_pred CCCCCCCCChHHcC--C-CCCCcEEEECCCCCCCcEecCcccccC------CCeEEEECCccccCcccCHHHcCEEE--E
Confidence 1 12455542 2 456888988888888899 47887775 3899999998 55667777777766 5
Q ss_pred CCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhh-----h---hcCCCccHHHHH---HHHccC---CcHHHHHHHHHH
Q 013210 243 SISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL-----M---LLGPTMNPKVAF---ELSERI---PHLGLRMKEHCH 308 (447)
Q Consensus 243 S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~-----~---~~g~~~~~~~a~---~~~~~~---~~l~~~~~~~~~ 308 (447)
|.+|.+|++| + |+++.++++++++........ . ..-.+++....+ .++..+ ..+..+.+++++
T Consensus 197 saqK~lGP~G--l-~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~ 273 (365)
T PLN02452 197 GAQKNVGPSG--V-TIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIR 273 (365)
T ss_pred ecccccCCCC--e-EEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 9999999888 4 888888888766432110000 0 011222222222 222222 136667788899
Q ss_pred HHHHHHHHHHhC-CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccc
Q 013210 309 RALIFARRMKKL-GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYET 387 (447)
Q Consensus 309 ~~~~l~~~L~~~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s 387 (447)
+++++.+.|++. ++ ..+.. .+.+ ....+++|.+++.+...+|++.++..+ +..--| ..
T Consensus 274 ~a~~l~~~l~~~~G~--y~~~~--~~~~-----------rs~~~vsF~~~~~~~~~~f~~~~~~~g----~~~~~G-~r- 332 (365)
T PLN02452 274 KADLLYDAIDESNGF--YVCPV--EKSV-----------RSLMNVPFTLGGSELEAEFVKEAAKAG----MVQLKG-HR- 332 (365)
T ss_pred HHHHHHHHHHhCCCc--ccCCC--ChHH-----------hCCeEEEEEcCCchhHHHHHHHHHHCC----CcccCC-cc-
Confidence 999999999885 33 11111 1110 123489999987666788999888643 222222 10
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013210 388 LMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 388 ~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 441 (447)
+-+-+|+|+= -.-..+.++.|.+.+++..+
T Consensus 333 -----------------------~~gg~R~s~y-na~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 333 -----------------------SVGGMRASIY-NAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred -----------------------ccCceEEECc-CCCCHHHHHHHHHHHHHHHH
Confidence 0123999876 66777888999988887754
No 363
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.44 E-value=2.6e-11 Score=129.55 Aligned_cols=275 Identities=15% Similarity=0.151 Sum_probs=184.1
Q ss_pred hHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhc-C--CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCC
Q 013210 100 TVLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLC-S--SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISD 174 (447)
Q Consensus 100 ~~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~-~--~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d 174 (447)
.+-+++..++++.|.+ ++-+..++|++.++++++.. . ++++|++++..|+.+...++..... .|++++.++
T Consensus 110 ~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~-~g~~v~~~~--- 185 (939)
T TIGR00461 110 ALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKP-FGIEVIVVD--- 185 (939)
T ss_pred HHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHh-cCcEEEEEc---
Confidence 3467888999999987 45788888888887776642 2 3478999999999999888655554 799988874
Q ss_pred HHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCcccc---
Q 013210 175 HEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFIS--- 249 (447)
Q Consensus 175 ~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g--- 249 (447)
+++|++.+ ++..|++.+|| -.|.+.|+++|++++|++|.+++++.-. ..+..+|-++|+|+++++..++.-
T Consensus 186 ~~~l~~~~---~~~~v~~q~Pn-~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g 261 (939)
T TIGR00461 186 CSDIKKAV---DVFGCLLQYPA-TDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMG 261 (939)
T ss_pred HHHHhhcC---CEEEEEEECCC-CCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCC
Confidence 55666555 57788888875 5899999999999999999999997655 344567889999999876555433
Q ss_pred --CCCCeeEEEEEcChHHHHHHHHH--------------------hh-hhhhhcCC--CccHH--H-----HHHHHccCC
Q 013210 250 --GGADIIAGAVCGPANLVNSMMDL--------------------HQ-GALMLLGP--TMNPK--V-----AFELSERIP 297 (447)
Q Consensus 250 --~~g~~igG~l~~~~~~~~~l~~~--------------------~~-~~~~~~g~--~~~~~--~-----a~~~~~~~~ 297 (447)
||+ +|++..++++...+-.. |. +..+--++ ....+ . +++...+-+
T Consensus 262 ~GGP~---aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~ 338 (939)
T TIGR00461 262 YGGPH---AAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPK 338 (939)
T ss_pred CCCCc---eeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHH
Confidence 343 48998888776654110 00 00000011 00111 1 112222334
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccc
Q 013210 298 HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGF 377 (447)
Q Consensus 298 ~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~ 377 (447)
.+.+.-++...++.++.+.|.+.|+++..+. +-..+.+.++.. .++.+.+++... |
T Consensus 339 GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~~-------------------fF~~~~v~~~~~-~~~~i~~~~~~~---g- 394 (939)
T TIGR00461 339 GLKNIARRIHSLTSILANGLENDPHELINKT-------------------WFDTLTVKVGNG-ISSELLKAAEEF---N- 394 (939)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-------------------ccceEEEEeCCC-CHHHHHHHHHHC---C-
Confidence 4555566678888999999998877665432 011556666422 255676666652 2
Q ss_pred ccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013210 378 MAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 437 (447)
Q Consensus 378 ~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 437 (447)
+.+.. ..++.|++|+. ..+++++|+.|.+++.
T Consensus 395 --i~l~~-------------------------~~~~~i~~s~~-E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 395 --INLRA-------------------------VDTTTVGIALD-ETTTKADVENLLKVFD 426 (939)
T ss_pred --Ceeee-------------------------cCCCEEEEEee-cCCCHHHHHHHHHHhc
Confidence 11210 12367999999 8999999999999885
No 364
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.42 E-value=1.4e-10 Score=110.90 Aligned_cols=281 Identities=17% Similarity=0.175 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhc---CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCH
Q 013210 101 VLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLC---SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDH 175 (447)
Q Consensus 101 ~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~---~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~ 175 (447)
+-+.+..+++|.|.+ ++-..-++|.+-.+++++.. ++.++++++...|+.+...++....- .|+++..++.+|+
T Consensus 122 LfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~-~g~~i~~~~~~d~ 200 (450)
T COG0403 122 LFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEG-LGIEIEVVDADDL 200 (450)
T ss_pred HHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhccc-CceEEEEeccchh
Confidence 456788899998864 34555677777777766642 22579999999999999999766654 7999999999999
Q ss_pred HHHHHhhccCCceEEEEEcCCCCCc-cccCHHHHHHHHHhcCCEEEEe--CCCCCCCCCccCCCCeEEEeCCCcc-----
Q 013210 176 EMVNSAIVQGRTKVLYFESISNPTL-AVANIPELSRLAHDKGVTVVVD--NTFSPLVLSPARLGADVVVHSISKF----- 247 (447)
Q Consensus 176 ~~l~~~i~~~~t~lV~i~~~~NptG-~v~~l~~I~~la~~~gi~livD--~~~~~~~~~~~~~g~di~~~S~sK~----- 247 (447)
+++++. ...++..|++++|+ -.| .+.++.+|.+.+|++|+++++= -.--.+.-.|-++|+||+++|..-+
T Consensus 201 ~~l~~~-~~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmg 278 (450)
T COG0403 201 DDLESA-DDGDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMG 278 (450)
T ss_pred hhhhhc-cccCeEEEEEecCC-CCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcC
Confidence 999988 46789999999997 466 6678999999999999887753 3323445578899999999998764
Q ss_pred ccCCCCeeEEEEEcChHHHHHH-------------------------HHHhhhhhhhcCCCccHH-----HHHHHHccCC
Q 013210 248 ISGGADIIAGAVCGPANLVNSM-------------------------MDLHQGALMLLGPTMNPK-----VAFELSERIP 297 (447)
Q Consensus 248 ~g~~g~~igG~l~~~~~~~~~l-------------------------~~~~~~~~~~~g~~~~~~-----~a~~~~~~~~ 297 (447)
|||| -+|+...++++...+ +.+|..-.++.-++.... ..++...+-+
T Consensus 279 fGGP---hag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~ 355 (450)
T COG0403 279 FGGP---HAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQ 355 (450)
T ss_pred CCCc---ceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChH
Confidence 3433 248888887765533 001111101111111111 1122333445
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhCC--CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccc
Q 013210 298 HLGLRMKEHCHRALIFARRMKKLG--LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQF 375 (447)
Q Consensus 298 ~l~~~~~~~~~~~~~l~~~L~~~~--~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~ 375 (447)
.+.+..++..++..+++++|++.+ .++.... . + -.+.+.++. +....++.+...
T Consensus 356 GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~--f----------F-------dt~~v~~~~-~~~~~l~~~~~~---- 411 (450)
T COG0403 356 GLKEIAERIHRLAAYLAAGLKEIGAGVELVFDH--F----------F-------DTFTVRVPE-EVAEALLAAAIA---- 411 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCceEecccc--c----------e-------eeEEEecch-hHHHHHHHHHHh----
Confidence 566677778899999999999665 4544321 0 0 045566653 345566655543
Q ss_pred ccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 376 GFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 376 g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
-++.++. ++...+=+|+. ..++++.|+.|.+++...
T Consensus 412 --~G~~L~~-------------------------~~~~~~~ia~t-Et~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 412 --GGINLRR-------------------------VDADTVLIALT-ETTTKEDIDALVAAFGGV 447 (450)
T ss_pred --cCCceee-------------------------ecCCceEEEee-cccCHHHHHHHHHHHhhh
Confidence 1333331 12345667777 667789999998888654
No 365
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.36 E-value=4.1e-10 Score=109.63 Aligned_cols=283 Identities=11% Similarity=0.011 Sum_probs=172.2
Q ss_pred CchHHHHHHHHHHHhCCC---eE-EEeCChHHHHHHHHHHhcCCCCeEE-EeCCCchhHHHHHHhhcCcccCeeEEEeC-
Q 013210 98 NPTVLNLSRQMAALEGTE---AA-YCTASGMSAISSVLMQLCSSGGHVV-AARTLYGGTHALLTHFFPRACNITTTFVD- 171 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~---~~-~~tsggt~A~~~al~~l~~~gd~Vi-~~~~~y~~~~~~~~~~~~~~~g~~~~~v~- 171 (447)
.....++++.+.++++.+ .+ ++.+|||.++.++...++.+|++++ +....+-+... .....+ .| ++..+.
T Consensus 48 ~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~--~~ea~~-~g-~v~~~~~ 123 (364)
T PRK12462 48 SSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKA--IGEASR-VA-AMRVVWD 123 (364)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHH--HHHHHh-cC-CceEecC
Confidence 355688899999999863 25 5556799999999999999998654 33333322221 122223 34 333322
Q ss_pred --------CCCHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEE
Q 013210 172 --------ISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVV 241 (447)
Q Consensus 172 --------~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~ 241 (447)
..++++++ + .++.+.|++++-...+|+..| ++.+.+++++|+|.+- +.-+++..++ |++.
T Consensus 124 ~~~~~~~~~p~~~~~~--~-~~d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~~--dvi~ 193 (364)
T PRK12462 124 GAASGYRTLPSLAELD--W-DARAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEAY--GMVY 193 (364)
T ss_pred cCCCCCCcCCCHHHhc--c-CCCCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChHHc--cEEE
Confidence 11455542 3 456788888777777888876 3333468999999885 3333444444 9999
Q ss_pred eCCCccccCCCCeeEEEEEcChHHHHHHHHH-------hhhh-hhhcCCCccHHHHHH---HHccC--C--cHHHHHHHH
Q 013210 242 HSISKFISGGADIIAGAVCGPANLVNSMMDL-------HQGA-LMLLGPTMNPKVAFE---LSERI--P--HLGLRMKEH 306 (447)
Q Consensus 242 ~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~-------~~~~-~~~~g~~~~~~~a~~---~~~~~--~--~l~~~~~~~ 306 (447)
.+..|.+|++|. ++++.+++.+++.... +... .....++++....+. .++.+ + .+..+.++.
T Consensus 194 agsQKnlgP~Gl---tvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~ 270 (364)
T PRK12462 194 AHAQKNLGPAGV---TVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDIN 270 (364)
T ss_pred eeccccCCCCce---EEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHH
Confidence 999999998884 6788888777654321 0000 001222333333222 22221 2 466677888
Q ss_pred HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCcc
Q 013210 307 CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYE 386 (447)
Q Consensus 307 ~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~ 386 (447)
++.++.+.+.+++.+.-...+..+.. ..-..+.|.+.+.+...+|++.++.. |++ .+-|..
T Consensus 271 ~~ka~~ly~~id~~~~~~~~~~~~~~--------------RS~mnv~f~~~~~~l~~~f~~~a~~~---gl~--~lkGhr 331 (364)
T PRK12462 271 ARKAAMLYATLDALNEVIDCHAHRAA--------------RSTMNVAFRFRQPRLDTLFKEQSTEA---GFC--GLSGHR 331 (364)
T ss_pred HHHHHHHHHHHHhCCCcccCCCChhh--------------cCcceEEEEcCCHHHHHHHHHHHHHC---CCc--cccCCc
Confidence 99999999999887621111111111 01126778888777678888888863 321 111111
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013210 387 TLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 387 s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 441 (447)
+-+.+|+|+= ..-+.+.++.|.+-+++..+
T Consensus 332 ------------------------~vgg~Ras~y-na~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 332 ------------------------SIGGIRASLY-NAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred ------------------------ccCceEEEcC-CCCCHHHHHHHHHHHHHHHH
Confidence 1255999987 77778888888888877654
No 366
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.35 E-value=5.2e-10 Score=116.69 Aligned_cols=153 Identities=12% Similarity=0.090 Sum_probs=116.8
Q ss_pred CchHHHHHHHHHHHhCCCeE-EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC---
Q 013210 98 NPTVLNLSRQMAALEGTEAA-YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~-~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--- 173 (447)
.....++++..|+++|++.. ++++|.|.+|.+++++++.+||.|++...+|.+.+..+. +.|+.++|+.+.
T Consensus 194 ~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLi-----lsga~PVYl~P~~n~ 268 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLM-----MSDVVPIWLKPTRNA 268 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHH-----HcCCeeEEecccccc
Confidence 34568899999999999885 557788999999999999999999999999999888762 368888887543
Q ss_pred -------C-----HHHHHHhhcc-CCc---eEEEEEcCCCCCccccCHHHHHHHHHhcCCEE-EEeCCC-CCCCCCc---
Q 013210 174 -------D-----HEMVNSAIVQ-GRT---KVLYFESISNPTLAVANIPELSRLAHDKGVTV-VVDNTF-SPLVLSP--- 232 (447)
Q Consensus 174 -------d-----~~~l~~~i~~-~~t---~lV~i~~~~NptG~v~~l~~I~~la~~~gi~l-ivD~~~-~~~~~~~--- 232 (447)
+ .+.+++++++ ++. +++++++| +-.|.+.++++|+++| |+.+ ++|++| +.+.+.+
T Consensus 269 ~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~ 344 (713)
T PRK15399 269 LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQ 344 (713)
T ss_pred cCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccC
Confidence 3 3888888843 233 57888887 4579999999999999 6666 699999 4444433
Q ss_pred ----cCC--CCeEE---EeCCCccccCCCCeeEEEEEc
Q 013210 233 ----ARL--GADVV---VHSISKFISGGADIIAGAVCG 261 (447)
Q Consensus 233 ----~~~--g~di~---~~S~sK~~g~~g~~igG~l~~ 261 (447)
... ++|.+ +.|.||.+++-. -++++-.
T Consensus 345 ~~sam~~~~~aD~~i~~tQStHKtL~alT--QaS~iHv 380 (713)
T PRK15399 345 GKSGMSGERVPGKVIFETQSTHKMLAAFS--QASLIHI 380 (713)
T ss_pred CcChhhCCCCCCeeeeeeeehhccccccc--hheeeee
Confidence 112 46776 999999998543 4466633
No 367
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.35 E-value=2.8e-10 Score=118.74 Aligned_cols=145 Identities=13% Similarity=0.115 Sum_probs=114.7
Q ss_pred chHHHHHHHHHHHhCCCeE-EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC----
Q 013210 99 PTVLNLSRQMAALEGTEAA-YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS---- 173 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~~~-~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~---- 173 (447)
....++++..|+++|++.. ++++|.|.+|.+++++++.+||.|++...+|.+.+..+. +.|+.++|+.+.
T Consensus 195 G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLi-----lsga~PVYl~P~rn~~ 269 (714)
T PRK15400 195 GPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMM-----MSDVTPIYFRPTRNAY 269 (714)
T ss_pred hHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHH-----HcCCeEEEeccccccc
Confidence 4568999999999999885 557777999999999999999999999999999887762 368888887543
Q ss_pred -----------CHHHHHHhhcc-CCce---EEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCc-----
Q 013210 174 -----------DHEMVNSAIVQ-GRTK---VLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSP----- 232 (447)
Q Consensus 174 -----------d~~~l~~~i~~-~~t~---lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~----- 232 (447)
+.+.+++.++. ++.+ .+++++| +-.|.+.++++|+++|+.++ +++|++| +.+.+.+
T Consensus 270 Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~ 346 (714)
T PRK15400 270 GILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGK 346 (714)
T ss_pred CCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCc
Confidence 37888888842 2333 6888887 45799999999999999887 6899999 4444332
Q ss_pred --cCCCC---e--EEEeCCCccccCC
Q 013210 233 --ARLGA---D--VVVHSISKFISGG 251 (447)
Q Consensus 233 --~~~g~---d--i~~~S~sK~~g~~ 251 (447)
...|+ | +++.|.||.+++-
T Consensus 347 sam~~ga~~~~~i~vtQStHKtL~al 372 (714)
T PRK15400 347 CGMSGGRVEGKVIYETQSTHKLLAAF 372 (714)
T ss_pred ChhhcCCCCCCceEEEEchhhcccch
Confidence 22355 4 9999999999853
No 368
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.34 E-value=2e-10 Score=113.02 Aligned_cols=278 Identities=16% Similarity=0.156 Sum_probs=159.3
Q ss_pred hHHHHHHHHHHHhCCCeE--EEeCChHHHHHHHHHHh---cCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCC
Q 013210 100 TVLNLSRQMAALEGTEAA--YCTASGMSAISSVLMQL---CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISD 174 (447)
Q Consensus 100 ~~~~l~~~ia~l~g~~~~--~~tsggt~A~~~al~~l---~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d 174 (447)
.+-+++..|+++.|.+-+ -...+++++-.+++++. -+++++|+++...|+.+...++.+..- .|++++.++.++
T Consensus 111 ~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~-~g~~iv~~~~~~ 189 (429)
T PF02347_consen 111 ALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAP-LGIEIVEVPLDE 189 (429)
T ss_dssp HHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCH-CCEEEEEE-BBT
T ss_pred HHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhh-CCeEEEEecccc
Confidence 456889999999998753 45567777666665554 223459999999999999888766654 799998887652
Q ss_pred HHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC---CCCCCCccCCCCeEEEeCCCccccCC
Q 013210 175 HEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF---SPLVLSPARLGADVVVHSISKFISGG 251 (447)
Q Consensus 175 ~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~---~~~~~~~~~~g~di~~~S~sK~~g~~ 251 (447)
... ..++++.+|++++|| -.|.+.++++|.+++|++|.++++ .+- -.+..+|.++|+|+++++ +|.||.|
T Consensus 190 ~~~----~d~~~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p 262 (429)
T PF02347_consen 190 DGT----TDDDDTAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIP 262 (429)
T ss_dssp TCS----B-STTEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT--
T ss_pred cCC----ccccCeEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCccc
Confidence 111 105689999999997 579999999999999999999987 543 223457888999999876 8877643
Q ss_pred ---CCeeEEEEEcChHHHHHHHH-------------------------Hhhhhhh-hcCCCccH----HHHHHHHccCCc
Q 013210 252 ---ADIIAGAVCGPANLVNSMMD-------------------------LHQGALM-LLGPTMNP----KVAFELSERIPH 298 (447)
Q Consensus 252 ---g~~igG~l~~~~~~~~~l~~-------------------------~~~~~~~-~~g~~~~~----~~a~~~~~~~~~ 298 (447)
|.+-.|++..++++...+-. .+..-.+ ..++.... ..+++...+-+.
T Consensus 263 ~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~G 342 (429)
T PF02347_consen 263 MGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEG 342 (429)
T ss_dssp -CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHH
Confidence 22334888888877654411 0110000 11111111 122334444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccc
Q 013210 299 LGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFM 378 (447)
Q Consensus 299 l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~ 378 (447)
+.+.-++...++.++.+.|++. ..+.+... +- --++....+. ....+++++... .
T Consensus 343 L~~iA~~~~~~A~yl~~~L~~~-~~~~~~~~---~f--------------~e~v~~~~~~-~~~~~l~~~~~~---~--- 397 (429)
T PF02347_consen 343 LREIAERIHLNAHYLAERLKKI-YGLPFDNP---FF--------------FEFVVVFSKD-KEVEELLKRGIE---G--- 397 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TBECSSSS---SB--------------SSEEEEESS--HHHHHHHHTT---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-cCcccCCC---Cc--------------eeeeeecCCc-HHHHHHHHHHHh---c---
Confidence 7777778899999999999886 32222221 10 0034444333 334455554443 1
Q ss_pred cccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013210 379 AVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 436 (447)
Q Consensus 379 ~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 436 (447)
++++.. ...+.+-+|+. -.+++++|+.|.++|
T Consensus 398 gl~~~~-------------------------~~~~~~li~~T-E~~t~edid~lv~~f 429 (429)
T PF02347_consen 398 GLNLRY-------------------------PDDGALLICVT-ETRTKEDIDRLVEAF 429 (429)
T ss_dssp -EEEGG-------------------------G-SSEEEEE---TT--HHHHHHHHH--
T ss_pred CCCccc-------------------------cCCCeEEEEcc-CCCCHHHHHHHHhcC
Confidence 112110 11347888998 888999999998775
No 369
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=6.3e-11 Score=111.58 Aligned_cols=289 Identities=15% Similarity=0.222 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHH
Q 013210 101 VLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNS 180 (447)
Q Consensus 101 ~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ 180 (447)
.-.+++.||+++|+++.++.+-|-.++..++.++++.||-|++.+....+....++ ...-.+.+...+|.++++.
T Consensus 141 HldlE~~iakF~G~E~aivYs~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~Glq-----lSRS~i~~Fkhndm~~ler 215 (467)
T KOG1358|consen 141 HLDLEKRIAKFMGTEDAIVYSYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQ-----LSRSTISYFKHNDMEDLER 215 (467)
T ss_pred ecccHHHHHHhhCCcceeeeccccchhhhcchhhhccCcEEEEehhhhHHHHHHHh-----hhhheeEEecCCCHHHHHH
Confidence 35799999999999999999999999999999999999999988876655554442 1344677778889999987
Q ss_pred hhccCC-------------ceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCC----------ccCCC
Q 013210 181 AIVQGR-------------TKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLS----------PARLG 236 (447)
Q Consensus 181 ~i~~~~-------------t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~----------~~~~g 236 (447)
.+ .++ -+.|+++...-++|.+.|+++|.++..+|...+|+|+.+ .+..-. ...-.
T Consensus 216 ll-~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~ 294 (467)
T KOG1358|consen 216 LL-PEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITD 294 (467)
T ss_pred hc-cCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccc
Confidence 66 222 246788999999999999999999999999999999998 222111 11114
Q ss_pred CeEEEeCCCccccCCCCeeEEEEEcChHHH--HHHHHHhhhhhhhcCCCccHHH---HHHHHccCCcHHHHHHHHHHHHH
Q 013210 237 ADVVVHSISKFISGGADIIAGAVCGPANLV--NSMMDLHQGALMLLGPTMNPKV---AFELSERIPHLGLRMKEHCHRAL 311 (447)
Q Consensus 237 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~--~~l~~~~~~~~~~~g~~~~~~~---a~~~~~~~~~l~~~~~~~~~~~~ 311 (447)
+|++++|+.-.++.. ||+.+++.-+. +++..... -+.....+.. |..++..+++-++..+.+.....
T Consensus 295 iDiv~~sm~~alas~----GgFc~G~~~i~~hQrLSg~~Y----~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~ 366 (467)
T KOG1358|consen 295 IDIVTASMETALASG----GGFCAGKSFIADHQRLSGSGY----CFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVA 366 (467)
T ss_pred eeeeeeccccccccc----CceeecceeeEeeeeccccce----eeeccCchhhhhhHHHHHHHHhhCcchhhhhhcccc
Confidence 799999999999854 48888854332 22322111 2233333332 22333333333445555555555
Q ss_pred HHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC----HHHHHHHHHHhhcccccccccccccCcc
Q 013210 312 IFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET----EEKANRLMNYLQNYAQFGFMAVSLGYYE 386 (447)
Q Consensus 312 ~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~----~~~~~~l~~~l~~~~~~g~~~vs~G~~~ 386 (447)
.+-..|+... +.+... +- .+++.+.+.. .++-..+++.+-+. ++.-|-
T Consensus 367 ~~H~~l~~~s~~~v~~~--~~-----------------SPi~hl~l~~~~~s~e~e~~lL~eivd~------~i~~~~-- 419 (467)
T KOG1358|consen 367 KFHAALSSNSGFIVSGS--PE-----------------SPIIHLQLERSYGSREKEEKLLEEIVDK------CIAEGV-- 419 (467)
T ss_pred ccchhhhcCCceEEecC--cC-----------------CceeeeeecccccchHHHHHHHHHHHHH------HHhhcc--
Confidence 5555665432 233321 22 2367777653 23334444443221 111110
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013210 387 TLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 440 (447)
Q Consensus 387 s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 440 (447)
++. .+.. +... ..-.-+..|||++. ....++.++...+.+++..
T Consensus 420 -ll~-~a~~----~~~~---e~~~~~pSiri~~~-a~~seeel~ra~~~ik~~~ 463 (467)
T KOG1358|consen 420 -LLT-RAKY----LEKL---ERCPIPPSIRICVS-AGMSEEELERAAELIKEVA 463 (467)
T ss_pred -eeh-hhhh----hhhc---ccCCCCCcEEEEEe-CCCCHHHHHHHHHHHHHHH
Confidence 000 0000 0000 00011357999999 9999999999888887764
No 370
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.31 E-value=8.2e-09 Score=106.91 Aligned_cols=223 Identities=17% Similarity=0.113 Sum_probs=143.4
Q ss_pred ccCCCCchHHHHHHHHHHHhCCCe--EEEeCChHHHHHHHHHHhcCC---------------------------------
Q 013210 93 YSRHFNPTVLNLSRQMAALEGTEA--AYCTASGMSAISSVLMQLCSS--------------------------------- 137 (447)
Q Consensus 93 ~~r~~~~~~~~l~~~ia~l~g~~~--~~~tsggt~A~~~al~~l~~~--------------------------------- 137 (447)
.+......-+++-+.+++++|-+. -.||+|||+||..++......
T Consensus 117 ~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~ 196 (608)
T TIGR03811 117 SSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMD 196 (608)
T ss_pred cCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccc
Confidence 333333333456667788888643 689999999999877643210
Q ss_pred -------------------C------CeEEEeCCCchhHHHHHHhhcCcccCe---eEEEeCCC-----CHHHHHHhhcc
Q 013210 138 -------------------G------GHVVAARTLYGGTHALLTHFFPRACNI---TTTFVDIS-----DHEMVNSAIVQ 184 (447)
Q Consensus 138 -------------------g------d~Vi~~~~~y~~~~~~~~~~~~~~~g~---~~~~v~~~-----d~~~l~~~i~~ 184 (447)
| ..++++...|.++...+. + .|+ .++.|+++ |+++|++.|++
T Consensus 197 l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~-i----lGlG~~~vv~VpvD~~~rmd~~~L~~~I~~ 271 (608)
T TIGR03811 197 LLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAAD-I----IGIGLDQVIPVPVDSNYRMDINELEKIIRK 271 (608)
T ss_pred cccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHH-H----cCCCcccEEEeecCCCCcCCHHHHHHHHHH
Confidence 0 057778887988887772 2 343 35666654 89999888732
Q ss_pred ----C-CceEEEEEcCCCCCccccCHHHHHHHH---HhcCC--EEEEeCCCCCCC----CC------c------------
Q 013210 185 ----G-RTKVLYFESISNPTLAVANIPELSRLA---HDKGV--TVVVDNTFSPLV----LS------P------------ 232 (447)
Q Consensus 185 ----~-~t~lV~i~~~~NptG~v~~l~~I~~la---~~~gi--~livD~~~~~~~----~~------~------------ 232 (447)
. .+-+|+....+..+|.+-|+++|+++| +++|+ ++|+|++|+++. .+ |
T Consensus 272 ~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~ 351 (608)
T TIGR03811 272 LAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYG 351 (608)
T ss_pred HHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhccccccc
Confidence 1 234566677788999999999999999 66887 699999996532 11 0
Q ss_pred -----------------cCC-CCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhh-----hh--------hhhcC
Q 013210 233 -----------------ARL-GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ-----GA--------LMLLG 281 (447)
Q Consensus 233 -----------------~~~-g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~-----~~--------~~~~g 281 (447)
..+ .+|-++..+||++..|-. .|++++.++++.+.+..... +. ....|
T Consensus 352 ~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~-~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~leg 430 (608)
T TIGR03811 352 VFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYS-AGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEG 430 (608)
T ss_pred ccccccccccHhHHHHHhcCcCceEEEeCcccccccCCC-eEEEEEeCHHHHHHHhcCcchhccccccCcccccccceec
Confidence 011 589999999999987654 43455556655443321100 00 01122
Q ss_pred CCcc--HHHHHHHHccC----CcHHHHHHHHHHHHHHHHHHHHhCC
Q 013210 282 PTMN--PKVAFELSERI----PHLGLRMKEHCHRALIFARRMKKLG 321 (447)
Q Consensus 282 ~~~~--~~~a~~~~~~~----~~l~~~~~~~~~~~~~l~~~L~~~~ 321 (447)
.... ....|+.++.+ +.+.+.+++..++++++.+.|++.+
T Consensus 431 SR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~ 476 (608)
T TIGR03811 431 SKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLE 476 (608)
T ss_pred CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2222 33445544433 3467788888999999999998864
No 371
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.27 E-value=5.5e-09 Score=99.30 Aligned_cols=279 Identities=15% Similarity=0.153 Sum_probs=144.0
Q ss_pred hHHHHHHHHHHHhCCC--eEEEeC-ChHHHHHHHHH-Hhc----C---C-----CCeEEEeCCCchhHHHHHHhhcCccc
Q 013210 100 TVLNLSRQMAALEGTE--AAYCTA-SGMSAISSVLM-QLC----S---S-----GGHVVAARTLYGGTHALLTHFFPRAC 163 (447)
Q Consensus 100 ~~~~l~~~ia~l~g~~--~~~~ts-ggt~A~~~al~-~l~----~---~-----gd~Vi~~~~~y~~~~~~~~~~~~~~~ 163 (447)
-+.++|+.+|+++|++ ++++.. |+-.-+.-++. +++ . | .-+.+++.|.|......++ .+
T Consensus 70 Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E-----~~ 144 (425)
T PF12897_consen 70 GIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITE-----HF 144 (425)
T ss_dssp --HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHH-----HC
T ss_pred ChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHH-----hh
Confidence 4578999999999974 455544 44333333332 221 1 1 1378999999998887774 37
Q ss_pred CeeEEEeCCC----CHHHHHHhhc-cCCceEEEEE-cCCCCCccccCHHHHHHHHH----hcCCEEEEeCCC--CCCCCC
Q 013210 164 NITTTFVDIS----DHEMVNSAIV-QGRTKVLYFE-SISNPTLAVANIPELSRLAH----DKGVTVVVDNTF--SPLVLS 231 (447)
Q Consensus 164 g~~~~~v~~~----d~~~l~~~i~-~~~t~lV~i~-~~~NptG~v~~l~~I~~la~----~~gi~livD~~~--~~~~~~ 231 (447)
|++...|+.+ |.+.+++.+. ++.+|.|++. .-+||||.++.-+-+.++|. ..+..++-|++| ..+.-+
T Consensus 145 Giemi~VpM~~dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~ 224 (425)
T PF12897_consen 145 GIEMIPVPMTEDGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDE 224 (425)
T ss_dssp T-EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSS
T ss_pred CcEEEecCCCCCCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeecccc
Confidence 8888877754 9999999873 4678888875 45899999998776666663 579999999999 334211
Q ss_pred -c----cC----------CCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccC
Q 013210 232 -P----AR----------LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI 296 (447)
Q Consensus 232 -~----~~----------~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~ 296 (447)
+ .. -+..++..|.||+-- +|..+ +++..+++-++.+.+..... +....-+++..-...+...
T Consensus 225 ~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf-~GaGv-a~~aaS~~Nl~~~~~~~~~~-tIgpdKvNQLRHvrff~d~ 301 (425)
T PF12897_consen 225 EPRDALLNILDACAKAGNPDRVYVFASTSKITF-PGAGV-AFFAASEANLAWIKKHLSVQ-TIGPDKVNQLRHVRFFKDA 301 (425)
T ss_dssp SS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS--EEEEE-HHHHHHHHHHHHHH--S---HHHHHHHHHHHHSH
T ss_pred ccchhhhHHHHHHHHcCCCCeEEEEeccccccc-CCcce-eeeecCHHHHHHHHHHhcCc-eeCccHHHHHHHHHHhcCh
Confidence 1 11 146789999999876 44446 88988888777776543311 1222234444333333333
Q ss_pred C-cHHHHHHHHHH----HHHH----HHHHHH-hCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHH
Q 013210 297 P-HLGLRMKEHCH----RALI----FARRMK-KLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRL 365 (447)
Q Consensus 297 ~-~l~~~~~~~~~----~~~~----l~~~L~-~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l 365 (447)
+ .+...++++.+ +.+. |.+.|. ..+. ....|. .|.+++|...... +.++
T Consensus 302 ~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~-------------------GGYFIsld~~~G~-Akrv 361 (425)
T PF12897_consen 302 EGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPK-------------------GGYFISLDVLDGT-AKRV 361 (425)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---S-------------------BSS-EEEEESTT--HHHH
T ss_pred hhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCC-------------------CceEEEEecCCCh-HHHH
Confidence 3 44444444322 2222 333333 2333 555554 5779999988653 6677
Q ss_pred HHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCC--CCeEEEEeCCCCCHHHHHH
Q 013210 366 MNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGIS--AGLVRMSVGYLGTLDQRWS 430 (447)
Q Consensus 366 ~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~--~~~iRiS~g~~~~~~~~i~ 430 (447)
++..+.. |+.-+..|.+ +|. |.+ +.-|||... ....+++-.
T Consensus 362 V~lakeA---GV~LT~AGAt-----fPy---------------g~DP~D~nIRiAPS-~P~leel~~ 404 (425)
T PF12897_consen 362 VELAKEA---GVALTPAGAT-----FPY---------------GKDPRDSNIRIAPS-YPSLEELET 404 (425)
T ss_dssp HHHHHHT---TEE---TTTT-----SGG---------------G--TTS-EEEE--S-SS-HHHHHH
T ss_pred HHHHHHh---CceeCCCCCC-----CCC---------------CCCCCCCcEEecCC-CCCHHHHHH
Confidence 7766653 2222233321 121 222 467999999 766555433
No 372
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.27 E-value=1.3e-10 Score=105.82 Aligned_cols=295 Identities=13% Similarity=0.128 Sum_probs=174.7
Q ss_pred chHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhcC----cccCe-eEEEeC
Q 013210 99 PTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFP----RACNI-TTTFVD 171 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~----~~~g~-~~~~v~ 171 (447)
..++-+++..+.+.+-+-++|++||+|||.++|+... .+-..+|+.+..|++........-| +..+. ++.||.
T Consensus 87 ~lv~cA~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VH 166 (452)
T KOG1403|consen 87 ELVQCARTLTSTLPELSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVH 166 (452)
T ss_pred HHHHHHHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeE
Confidence 3445556666666666779999999999999998543 2334688888888887766522111 00111 112221
Q ss_pred ---CC---------------C-----HHHHHHhhcc-----CCceEEEEEcCCCCCccccC----HHHHHHHHHhcCCEE
Q 013210 172 ---IS---------------D-----HEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTV 219 (447)
Q Consensus 172 ---~~---------------d-----~~~l~~~i~~-----~~t~lV~i~~~~NptG~v~~----l~~I~~la~~~gi~l 219 (447)
.. | .+.+++.+++ ..+.+.+.|+.++-.|.+.| .+++++..+.+|-++
T Consensus 167 VAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~ 246 (452)
T KOG1403|consen 167 VAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVC 246 (452)
T ss_pred ecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeE
Confidence 11 1 1234444421 23456666888888898876 678899999999999
Q ss_pred EEeCCCCCCCC------Cc--cCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHh-hhhhhhcCCCccHHHHH
Q 013210 220 VVDNTFSPLVL------SP--ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH-QGALMLLGPTMNPKVAF 290 (447)
Q Consensus 220 ivD~~~~~~~~------~~--~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~-~~~~~~~g~~~~~~~a~ 290 (447)
|.||+|.+|.. .. ..+=.|+++ +.|.+| .|.++ ++++..+++.+.+.... ..+.+..|++.+.+.+.
T Consensus 247 IaDEVQvGFGRvG~hyWafq~y~fiPDIVt--mgKpmG-NGhPV-a~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~l 322 (452)
T KOG1403|consen 247 IADEVQVGFGRVGSHYWAFQTYNFIPDIVT--MGKPMG-NGHPV-AAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGL 322 (452)
T ss_pred Eeehhhhcccccchhhhhhhhhccccchhe--ecccCC-CCCee-eEEeccHHHHHHhccccceehhccCCCchhHHHHH
Confidence 99999955531 11 122346665 899998 67778 89999999998886532 22334556666666555
Q ss_pred HHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC--------CHHHH
Q 013210 291 ELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME--------TEEKA 362 (447)
Q Consensus 291 ~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~--------~~~~~ 362 (447)
+.++.++. +...+..++..++|...|++...+...-+ +..|.|.++.+++. ....+
T Consensus 323 aVm~v~e~-E~Lq~ha~~vG~~L~~lL~~~k~kh~~IG---------------DvRGvGLFiGIdLVkD~~tRtP~tk~A 386 (452)
T KOG1403|consen 323 AVMRVCED-ENLQEHAQQVGEKLEVLLRRLKQKHECIG---------------DVRGVGLFIGIDLVKDRKTRTPDTKEA 386 (452)
T ss_pred HHHHHHhh-hhHHHHHHHHHHHHHHHHHHHhhhcccee---------------ccccceEEEeeeeecccccCCCcHHHH
Confidence 55554332 11122223334444444444322111111 23378889999875 12345
Q ss_pred HHHHHHhhcccccccccccccCccccccccccccCCCCCHHHHHhcCCCCCeEE----EEeCCCCCHHHHHHHHHHHHHH
Q 013210 363 NRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVR----MSVGYLGTLDQRWSQFEKALSR 438 (447)
Q Consensus 363 ~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iR----iS~g~~~~~~~~i~~l~~al~~ 438 (447)
..++.+|+. .+++ .+|.-+.. .+.+. ++|. .++.++.+..|.+.|..
T Consensus 387 ~~~v~rlke--~y~V-LlsaDGPh-------------------------~NilKiKPPmCFn-eena~e~v~~ld~iLT~ 437 (452)
T KOG1403|consen 387 HWVVNRLKE--LYRV-LLSADGPH-------------------------RNILKIKPPMCFN-EENADEFVLGLDEILTV 437 (452)
T ss_pred HHHHHHHHH--hhhE-EEecCCCC-------------------------CceeecCCCcccC-hhhHHHHHHHHHHHHHH
Confidence 566777775 2342 33433211 12222 3555 78999999999999986
Q ss_pred hhhc
Q 013210 439 MQDS 442 (447)
Q Consensus 439 ~~~~ 442 (447)
+.+.
T Consensus 438 mee~ 441 (452)
T KOG1403|consen 438 MEER 441 (452)
T ss_pred HHHH
Confidence 6543
No 373
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.25 E-value=4.5e-09 Score=105.65 Aligned_cols=155 Identities=18% Similarity=0.216 Sum_probs=120.5
Q ss_pred hHHHHHHHHHHHhCCCeE-EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----
Q 013210 100 TVLNLSRQMAALEGTEAA-YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS----- 173 (447)
Q Consensus 100 ~~~~l~~~ia~l~g~~~~-~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~----- 173 (447)
...++++..|+.+|++.. ++++|.+.||..++++++.+||.|++...+|.+.+..+. +.|+.+.|+...
T Consensus 71 ~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~gli-----laGa~Pvyl~p~~np~~ 145 (557)
T COG1982 71 PIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLI-----LAGATPVYLEPSRNPLY 145 (557)
T ss_pred cHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHH-----HcCCceEEecCCCCccc
Confidence 457899999999999975 557888889999999999999999999999999887762 267777776543
Q ss_pred ------CHHHHHHhhcc-CCc-eEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCC------ccCCCCe
Q 013210 174 ------DHEMVNSAIVQ-GRT-KVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLS------PARLGAD 238 (447)
Q Consensus 174 ------d~~~l~~~i~~-~~t-~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~------~~~~g~d 238 (447)
+.+.+++++.+ +.. +++++.+|+ -.|++.++++|.++++.+++++.+|+++ ..+.+. ..+.++|
T Consensus 146 gi~ggI~~~~~~~~l~~~~~~~k~~vitnpT-YdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~ 224 (557)
T COG1982 146 GIIGGIPLETFKEALLAHPDAEKLAVITNPT-YDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGAD 224 (557)
T ss_pred cccCCCCHHHHHHHHHhChhhheeEEEecCc-cceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCce
Confidence 67888776633 345 788887765 3699999999999999999999999997 333322 1235899
Q ss_pred EEEeCCCccccCCCCeeEEEEEcC
Q 013210 239 VVVHSISKFISGGADIIAGAVCGP 262 (447)
Q Consensus 239 i~~~S~sK~~g~~g~~igG~l~~~ 262 (447)
+++.|.||.+++-. .+..+-.+
T Consensus 225 ~~tqS~HK~l~alS--QaS~iHv~ 246 (557)
T COG1982 225 FVTQSTHKLLAALS--QASMIHVK 246 (557)
T ss_pred EEEechhhhhhhhh--hhHHHhhC
Confidence 99999999998533 43555333
No 374
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.25 E-value=8.4e-12 Score=118.85 Aligned_cols=164 Identities=24% Similarity=0.307 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCc---hhHHHHHHhhcCcccCeeEEEeCCC---CH
Q 013210 102 LNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLY---GGTHALLTHFFPRACNITTTFVDIS---DH 175 (447)
Q Consensus 102 ~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y---~~~~~~~~~~~~~~~g~~~~~v~~~---d~ 175 (447)
..+++.++.+.|+++++++++...|+.+++.++. +|++||++..+- ++.... .+.+.. .|...+.|-.. .+
T Consensus 50 ~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRi-p~vm~~-sGa~lvEVGttN~t~~ 126 (367)
T PF03841_consen 50 AHVEELLCELTGAEAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRI-PDVMRQ-SGARLVEVGTTNRTHL 126 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccc-ccccccccccccccccccccc-cccccc-cccccccccccccccc
Confidence 4577889999999999999999999999988775 578899888543 333222 133333 67777666543 57
Q ss_pred HHHHHhhccCCceEEEEEcCCCCC--ccc--cCHHHHHHHHHhcCCEEEEeCCCCC--------CC-----CCccCCCCe
Q 013210 176 EMVNSAIVQGRTKVLYFESISNPT--LAV--ANIPELSRLAHDKGVTVVVDNTFSP--------LV-----LSPARLGAD 238 (447)
Q Consensus 176 ~~l~~~i~~~~t~lV~i~~~~Npt--G~v--~~l~~I~~la~~~gi~livD~~~~~--------~~-----~~~~~~g~d 238 (447)
++.+++| +++|.+++--+++|-. |.. .+++++++++++|++++++|..-+. ++ ....+.|+|
T Consensus 127 ~Dye~AI-~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaD 205 (367)
T PF03841_consen 127 SDYEKAI-TENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGAD 205 (367)
T ss_dssp -----------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-S
T ss_pred ccccccc-cccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCC
Confidence 8899999 8999998777777753 323 4799999999999999999976411 11 123456999
Q ss_pred EEEeCCCccccCCCCeeEEEEEcChHHHHHHHHH
Q 013210 239 VVVHSISKFISGGADIIAGAVCGPANLVNSMMDL 272 (447)
Q Consensus 239 i~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~ 272 (447)
++++|..|.+|+|- +|++++++++++++++.
T Consensus 206 lV~fSGdKlLGGPQ---aGiI~Gkk~lI~~lk~~ 236 (367)
T PF03841_consen 206 LVTFSGDKLLGGPQ---AGIIVGKKELIEKLKKH 236 (367)
T ss_dssp EEEEETTSSSSS-S----EEEEEEHHHHHHHHHH
T ss_pred EEEEECCCcCCCCC---eEEEEeCHHHHHHHhhC
Confidence 99999999999886 49999999999988753
No 375
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.23 E-value=4e-09 Score=99.53 Aligned_cols=203 Identities=19% Similarity=0.231 Sum_probs=132.5
Q ss_pred cccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHh----C----CCeEEEeCChHHHHHHHH
Q 013210 60 MSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALE----G----TEAAYCTASGMSAISSVL 131 (447)
Q Consensus 60 ~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~----g----~~~~~~tsggt~A~~~al 131 (447)
|-+..+..|..+..+...++++..-| |.-.|+. ..-+.-.|+.+|++. | .++|++|.|++.|+..++
T Consensus 79 p~lLd~~~fp~Dai~RA~~~L~~~gG---s~GaYS~--SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il 153 (475)
T KOG0258|consen 79 PELLDSPEFPTDAIKRAKRILNDCGG---SLGAYSD--SQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSIL 153 (475)
T ss_pred hhhcCCCCCCHHHHHHHHHHHHhcCC---ccccccc--ccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHH
Confidence 33444444443334777777776532 2223332 233456788888876 3 245999999999999999
Q ss_pred HHhc-CCCCeEEEeCCCchhHHHHHHhhcCcccCeeE-EEeCCC-----CHHHHHHhhc----cCCceEEEEEcCCCCCc
Q 013210 132 MQLC-SSGGHVVAARTLYGGTHALLTHFFPRACNITT-TFVDIS-----DHEMVNSAIV----QGRTKVLYFESISNPTL 200 (447)
Q Consensus 132 ~~l~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~-~~v~~~-----d~~~l~~~i~----~~~t~lV~i~~~~NptG 200 (447)
..++ .+.+-|+++-|-|+-|.+.+..+. +..+ .+++.. |.++|++.++ .-+++++++-+|.||||
T Consensus 154 ~l~~~~~~~GvliPiPQYPLYsAti~l~~----~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTG 229 (475)
T KOG0258|consen 154 SLLIAGKKTGVLIPIPQYPLYSATISLLG----GTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTG 229 (475)
T ss_pred HHHhcCCCCceEeecCCCchhHHHHHHhC----CcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccc
Confidence 8765 456889999999998888774322 1122 223321 7888877662 23678999999999999
Q ss_pred ccc---CHHHHHHHHHhcCCEEEEeCCCCCCCCCcc-----------CCC---C----eEEEeCCCccccCCCCeeEEEE
Q 013210 201 AVA---NIPELSRLAHDKGVTVVVDNTFSPLVLSPA-----------RLG---A----DVVVHSISKFISGGADIIAGAV 259 (447)
Q Consensus 201 ~v~---~l~~I~~la~~~gi~livD~~~~~~~~~~~-----------~~g---~----di~~~S~sK~~g~~g~~igG~l 259 (447)
.+. .+++|.++|++++++++.||+|..-.+... ++| . -+..+|.||.+.+--.--||++
T Consensus 230 qvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYm 309 (475)
T KOG0258|consen 230 QVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYM 309 (475)
T ss_pred hhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCee
Confidence 997 588999999999999999999833222110 111 1 2557788999887533347887
Q ss_pred --Ec-ChHHHHHHHH
Q 013210 260 --CG-PANLVNSMMD 271 (447)
Q Consensus 260 --~~-~~~~~~~l~~ 271 (447)
+. +++..+.+.+
T Consensus 310 Ev~n~~prv~~qi~K 324 (475)
T KOG0258|consen 310 ESLNRDPRVKQQIKK 324 (475)
T ss_pred ecccCChhHHHHHHH
Confidence 22 3444444443
No 376
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.22 E-value=4.5e-10 Score=108.00 Aligned_cols=159 Identities=27% Similarity=0.296 Sum_probs=118.1
Q ss_pred HHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCC-----CchhHHHHHHhhcCcccCeeEEEeCCC---C
Q 013210 103 NLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAART-----LYGGTHALLTHFFPRACNITTTFVDIS---D 174 (447)
Q Consensus 103 ~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~-----~y~~~~~~~~~~~~~~~g~~~~~v~~~---d 174 (447)
.+.+....+.+++.+++++..+.|+..++.++.. +++||++.. .+..+...+ . ..|.++..+... .
T Consensus 72 ~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~-~~EvVis~g~lV~gg~~~v~d~~----~-~aG~~l~EvG~tn~t~ 145 (395)
T COG1921 72 ELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAE-GKEVVVSRGELVEGGAFRVPDII----R-LAGAKLVEVGTTNRTH 145 (395)
T ss_pred HHHHHHhcccchhheeeECCcHHHHHHHHhhhcc-CCeEEEEccccccCCCCChhHHH----H-HcCCEEEEecccCcCC
Confidence 4555666666788999999999999999888765 556666552 334444444 2 268787776543 7
Q ss_pred HHHHHHhhccCCceEEEEEcCCCCCccc--cCHHHHHHHHHhcCCEEEEeCCCCCCC---C---CccCCCCeEEEeCCCc
Q 013210 175 HEMVNSAIVQGRTKVLYFESISNPTLAV--ANIPELSRLAHDKGVTVVVDNTFSPLV---L---SPARLGADVVVHSISK 246 (447)
Q Consensus 175 ~~~l~~~i~~~~t~lV~i~~~~NptG~v--~~l~~I~~la~~~gi~livD~~~~~~~---~---~~~~~g~di~~~S~sK 246 (447)
..+++.+| +++|++++=.+-+|- |.. .++++++++||++|+++++|.+-+... . .....|+|++++|..|
T Consensus 146 ~~d~~~AI-ne~ta~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdK 223 (395)
T COG1921 146 LKDYELAI-NENTALLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDK 223 (395)
T ss_pred HHHHHHHh-ccCCeeEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecch
Confidence 88999999 888887654443432 433 478899999999999999999864321 1 2245699999999999
Q ss_pred cccCCCCeeEEEEEcChHHHHHHHHH
Q 013210 247 FISGGADIIAGAVCGPANLVNSMMDL 272 (447)
Q Consensus 247 ~~g~~g~~igG~l~~~~~~~~~l~~~ 272 (447)
.+|+|- +|+++++++++++++..
T Consensus 224 llgGPq---aGii~GkKelI~~lq~~ 246 (395)
T COG1921 224 LLGGPQ---AGIIVGKKELIEKLQSH 246 (395)
T ss_pred hcCCCc---cceEechHHHHHHHHhh
Confidence 999884 59999999999888754
No 377
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.17 E-value=2.1e-08 Score=94.06 Aligned_cols=308 Identities=17% Similarity=0.188 Sum_probs=179.7
Q ss_pred cCCCCchhhHhhhcCCCCCCCCccccccccccccccCCH-HHHHHhhcCCCC--CCCCCccccCCCCchHHHHH-HHHHH
Q 013210 35 AAAWEDPAAALASARHEFGEHGGVNMSIEASATFTVMEP-ETMRRMFAGELG--PDRDFFIYSRHFNPTVLNLS-RQMAA 110 (447)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~-~~~~~~~~~~~~--~~~~~~~~~r~~~~~~~~l~-~~ia~ 110 (447)
++++.||+..-+--+....+..++ -+-+|-.|+...+ +++-..+.++|. -|...|+-|...-...+.|. ++--+
T Consensus 20 ~l~~~DPev~~ii~~Ek~RQ~~gi--eLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALe 97 (477)
T KOG2467|consen 20 PLEEVDPEVHDIIEKEKERQKRGI--ELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALE 97 (477)
T ss_pred chhhcChHHHHHHHHHHHhhhcce--eEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHH
Confidence 377778877666543233333333 3456667776665 666666766652 23333322222212233332 23334
Q ss_pred HhCCCe----E-EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHH--HHhhcCcccCeeEEE-------eCCC---
Q 013210 111 LEGTEA----A-YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHAL--LTHFFPRACNITTTF-------VDIS--- 173 (447)
Q Consensus 111 l~g~~~----~-~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~--~~~~~~~~~g~~~~~-------v~~~--- 173 (447)
.++.++ + +-.-||+.||..+..++++|+++|.-.+.-+++.... .... .+ ....-.+ |+..
T Consensus 98 aF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~-kk-ISa~SiyFeSmPYkv~~~TG~ 175 (477)
T KOG2467|consen 98 AFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPT-KK-ISATSIYFESMPYKVDPSTGY 175 (477)
T ss_pred HhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCC-ce-eeeeeeecccCceeeCCCCCc
Confidence 566543 3 3345899999999999999999998766544433211 1000 01 1111111 2211
Q ss_pred -CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCC-----CCccCCCCeEEEeCCCc
Q 013210 174 -DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLV-----LSPARLGADVVVHSISK 246 (447)
Q Consensus 174 -d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~-----~~~~~~g~di~~~S~sK 246 (447)
|.|.||+....-++++|+.-.. -.-...|.+++.++|.+.|+++.+|-+| .++. -+|.++ +|+|+.+.||
T Consensus 176 IDYD~Le~~A~~frPk~iiaG~S--aY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey-~DiVTTTTHK 252 (477)
T KOG2467|consen 176 IDYDKLEKTATLFRPKLIIAGTS--AYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY-CDIVTTTTHK 252 (477)
T ss_pred eehHHHHHHHHhcCCcEEEeccc--cchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc-cceeeccccc
Confidence 7888887653457788776332 2335678999999999999999999998 5443 355554 8999999999
Q ss_pred cccCCCCeeEEEEEcCh---------------HHHHHHHHHhhhhhhhcCCCccHHHHHH-HHcc--CCcHHHHHHHHHH
Q 013210 247 FISGGADIIAGAVCGPA---------------NLVNSMMDLHQGALMLLGPTMNPKVAFE-LSER--IPHLGLRMKEHCH 308 (447)
Q Consensus 247 ~~g~~g~~igG~l~~~~---------------~~~~~l~~~~~~~~~~~g~~~~~~~a~~-~~~~--~~~l~~~~~~~~~ 308 (447)
.+-+| | ||.+.-++ ++-+++...-. .....|+.....++.+ ++.. -..+.+..++..+
T Consensus 253 sLRGP--R-g~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVF-P~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~ 328 (477)
T KOG2467|consen 253 SLRGP--R-GAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVF-PGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLK 328 (477)
T ss_pred cccCC--c-ceeEEEeccCCcCCCCCCCcceechhhhhhhhcc-ccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHH
Confidence 99876 4 46664332 12223332111 1112333333333332 2222 2446777888899
Q ss_pred HHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC----CHHHHHHHHHHhhc
Q 013210 309 RALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME----TEEKANRLMNYLQN 371 (447)
Q Consensus 309 ~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~----~~~~~~~l~~~l~~ 371 (447)
++..|++.|.+.|+++..-+...| ++-+++. +...++.+++.+.+
T Consensus 329 Nakala~~l~~~Gy~lvtgGTDnH------------------lvLvDLr~~G~dGarvE~vle~~~I 377 (477)
T KOG2467|consen 329 NAKALASALISRGYKLVTGGTDNH------------------LVLVDLRPKGVDGARVEKVLELCHI 377 (477)
T ss_pred HHHHHHHHHHHcCceEecCCccce------------------EEEEeccccCCchHHHHHHHHHhhh
Confidence 999999999999997765442221 6667765 34457778877764
No 378
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.14 E-value=4.9e-09 Score=100.51 Aligned_cols=222 Identities=19% Similarity=0.203 Sum_probs=145.6
Q ss_pred chHHHHHHHHHHHhCCCeEEEe-CChHHHHHHHHHHhc----CCC----CeEEEeCCCchhHHHHHHhhcCcccCeeEEE
Q 013210 99 PTVLNLSRQMAALEGTEAAYCT-ASGMSAISSVLMQLC----SSG----GHVVAARTLYGGTHALLTHFFPRACNITTTF 169 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~~~~~t-sggt~A~~~al~~l~----~~g----d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~ 169 (447)
..+.+|++.+.++.|.+.+-+- ++|.++=.+.++.+. ..| +.+++++..|+....+. ...|.+|+.
T Consensus 109 ~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASA-----am~G~~VV~ 183 (496)
T COG1003 109 ELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASA-----AMAGFKVVV 183 (496)
T ss_pred HHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhH-----hhcCceEEE
Confidence 4567888999999999887655 566666555554432 223 57889999998877776 247999999
Q ss_pred eCCC-----CHHHHHHhhccCCceEEEEEcCCCCCccc-cCHHHHHHHHHhcCCEEEEeCCC--CCC-CCCccCCCCeEE
Q 013210 170 VDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAV-ANIPELSRLAHDKGVTVVVDNTF--SPL-VLSPARLGADVV 240 (447)
Q Consensus 170 v~~~-----d~~~l~~~i~~~~t~lV~i~~~~NptG~v-~~l~~I~~la~~~gi~livD~~~--~~~-~~~~~~~g~di~ 240 (447)
|+.+ |+++|++.+ .+++.++.+++||. .|.. .++.+|+++.|++|..+..|.+- +-+ ..+|-++|.|++
T Consensus 184 V~~~~~G~VDlddLk~k~-~~~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~ 261 (496)
T COG1003 184 VKCDENGNVDLDDLRAKA-EDNLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVV 261 (496)
T ss_pred EecCCCCCccHHHHHHHh-ccceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceE
Confidence 9876 999999999 78999999999874 4544 47999999999999999999986 222 257889999999
Q ss_pred EeCCCccccCC---CCeeEEEEEcChHHHHHHHH---Hhhh---------------hhhhcCCCccHHHHHHHHcc--CC
Q 013210 241 VHSISKFISGG---ADIIAGAVCGPANLVNSMMD---LHQG---------------ALMLLGPTMNPKVAFELSER--IP 297 (447)
Q Consensus 241 ~~S~sK~~g~~---g~~igG~l~~~~~~~~~l~~---~~~~---------------~~~~~g~~~~~~~a~~~~~~--~~ 297 (447)
=.-+||.|+.| |..=.|=+..+.++...+-. .+.. .....|+......+|.-++. .+
T Consensus 262 HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~ 341 (496)
T COG1003 262 HLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGAD 341 (496)
T ss_pred EeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHHHhHH
Confidence 99999998633 11111445544444332211 0000 00112222222234443332 23
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 013210 298 HLGLRMKEHCHRALIFARRMKKLGLKVLYPG 328 (447)
Q Consensus 298 ~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~ 328 (447)
.+...-+.-.-+++++..+|+.. +++.|.+
T Consensus 342 GL~~ase~AvLNANYia~rL~~~-y~~~y~~ 371 (496)
T COG1003 342 GLKQASEVAVLNANYIARRLKGY-YPVPYTG 371 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHhhhc-CccccCC
Confidence 34444455567888999999862 3444433
No 379
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.11 E-value=1e-08 Score=99.22 Aligned_cols=343 Identities=11% Similarity=0.061 Sum_probs=195.9
Q ss_pred hhhHhhhcCCCCCCCCccccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCe---E
Q 013210 41 PAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEA---A 117 (447)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~---~ 117 (447)
-+-++++-....+.+ .--.++..+.+...++...+....-+++ ||.....|+-. ...-.+.-..++.++++.. -
T Consensus 65 ~v~~~i~~~~~ld~~-~~~~~vS~~v~~~~~~~~~l~~~~~~k~-N~l~~d~fp~~-~~~e~~~Vnm~~~L~~~~~~~~g 141 (491)
T KOG1383|consen 65 AVLELINDELMLDGN-PRLGLASGVVYWGEPELDKLIMEAYNKF-NPLHPDEFPVV-RKLEAECVNMIANLFNAPSDSCG 141 (491)
T ss_pred HHHHHHHHHhccCCC-cccCeeeEEEecCCcchhhHHHHHHhhc-CccCccccchh-HHHHHHHHHHHHHHhcCCccccC
Confidence 345555544333322 1222333444454455533332222233 55443333321 1122334455677777644 3
Q ss_pred EEeCChHHHHHHHHHHhc---C--CC---CeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC------CHHHHHHhhc
Q 013210 118 YCTASGMSAISSVLMQLC---S--SG---GHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS------DHEMVNSAIV 183 (447)
Q Consensus 118 ~~tsggt~A~~~al~~l~---~--~g---d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~i~ 183 (447)
.-|.||++|+.++-+... . .| ..|+++.. .+..++.+... ++++++.|+.+ |+..+.+.+
T Consensus 142 ~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~----v~~a~eK~a~y-f~v~l~~V~~~~~~~~~D~~k~~~~i- 215 (491)
T KOG1383|consen 142 CGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQN----VHAAFEKAARY-FEVELREVPLDEGDYRVDPGKVVRMI- 215 (491)
T ss_pred ccccccchHHHHHHHHHHHHHHhccCCCCccccchHH----HHHHHHHHHhh-EEEEEEeeeccccceEecHHHHHHHh-
Confidence 568899999665554421 1 12 23444444 44445444433 77888887776 899999999
Q ss_pred cCCceEEEEEcCCCCCccccCHHHHHHHHHh-cCCEEEEeCCCCCCCCC-------ccCC---CCeEEEeCCCcccc-CC
Q 013210 184 QGRTKVLYFESISNPTLAVANIPELSRLAHD-KGVTVVVDNTFSPLVLS-------PARL---GADVVVHSISKFIS-GG 251 (447)
Q Consensus 184 ~~~t~lV~i~~~~NptG~v~~l~~I~~la~~-~gi~livD~~~~~~~~~-------~~~~---g~di~~~S~sK~~g-~~ 251 (447)
+++|.+|+.+.++-|+|.+-|+++|.++..+ +++.+|+|.+-++|... +.++ ++.-...+.||+-- ++
T Consensus 216 ~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~ 295 (491)
T KOG1383|consen 216 DENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPA 295 (491)
T ss_pred ccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCceeEeeccceeeeeec
Confidence 8899999999999999999999999999999 99999999998766441 1222 56677888999754 44
Q ss_pred CCeeEEEE-EcChHHHH-HHH---HHh---hhhhhhcCCCcc--HHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHh
Q 013210 252 ADIIAGAV-CGPANLVN-SMM---DLH---QGALMLLGPTMN--PKVAFELSE--RIPHLGLRMKEHCHRALIFARRMKK 319 (447)
Q Consensus 252 g~~igG~l-~~~~~~~~-~l~---~~~---~~~~~~~g~~~~--~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~ 319 (447)
| + ||+ +..+++.. .+. .+. ..+.+..|+-+. ..++|+.+. +.+...+..++..+++..|++.+++
T Consensus 296 G--~-~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~ 372 (491)
T KOG1383|consen 296 G--S-SWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIEN 372 (491)
T ss_pred C--c-EEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 4 3 555 55554432 111 010 011112222222 223444333 3345667888899999999999988
Q ss_pred CCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhcccccccccccccCcccccccccccc
Q 013210 320 LGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSST 396 (447)
Q Consensus 320 ~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~l~~~l~~~~~~g~~~vs~G~~~s~~~~~a~~~ 396 (447)
.+. .+..+. .++|.+.+. -+..++-+.|.. +|.+.-. ...|+
T Consensus 373 i~~i~i~gkp----------------------~vs~~~~~s~~~~i~elsd~l~~---~GW~lna-------lq~P~--- 417 (491)
T KOG1383|consen 373 IKGIKIVGKP----------------------LVSFILFGSNDVNIFELSDLLRK---KGWILNA-------LQFPA--- 417 (491)
T ss_pred cccceecCCC----------------------cEEEEEccCCccchhhhhHHHHh---cCcCccc-------cCCCC---
Confidence 654 444332 455554421 123344455553 3332211 11122
Q ss_pred CCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhcC
Q 013210 397 SSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDSG 443 (447)
Q Consensus 397 ~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~~ 443 (447)
++.-...|+.+- .+-.++++.++.++++++...+
T Consensus 418 ------------a~Hi~vt~~~~~-~~~A~~~v~Di~~~~~el~~~p 451 (491)
T KOG1383|consen 418 ------------AIHICVTRVHAR-EDVADRFVADIRKVVEELKSLP 451 (491)
T ss_pred ------------ceEEEEEeeecc-HHHHHHHHHHHHHHHHHHHhCC
Confidence 111244677666 4556889999999999987654
No 380
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.11 E-value=2.8e-09 Score=99.98 Aligned_cols=288 Identities=15% Similarity=0.157 Sum_probs=150.5
Q ss_pred chHHHHHHHHHHHh---C-C----CeEEEeCChHHHHHHHHHHhcCC----C--CeEEEeCCCchhHHHHHHhhcCcccC
Q 013210 99 PTVLNLSRQMAALE---G-T----EAAYCTASGMSAISSVLMQLCSS----G--GHVVAARTLYGGTHALLTHFFPRACN 164 (447)
Q Consensus 99 ~~~~~l~~~ia~l~---g-~----~~~~~tsggt~A~~~al~~l~~~----g--d~Vi~~~~~y~~~~~~~~~~~~~~~g 164 (447)
-...+|++.|.+|. | + ..++|..|+|+-+++++.+|... + -+|+...|.|+.+.... .++.. ..
T Consensus 43 f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt-~~f~s-~~ 120 (363)
T PF04864_consen 43 FISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQT-DFFDS-RL 120 (363)
T ss_dssp TS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHC-CCT-B-TT
T ss_pred eccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHH-Hhccc-cC
Confidence 34467888888775 3 1 34999999999999999988533 1 37999999999887665 44432 22
Q ss_pred eeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCcc--CCCCeEEEe
Q 013210 165 ITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSPA--RLGADVVVH 242 (447)
Q Consensus 165 ~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~~--~~g~di~~~ 242 (447)
.+..- |...+...- ++.+-+=++++||||.|.+.. .+++.-+..+|-|-+|-.-.+.|. ..+-|++++
T Consensus 121 y~w~G----da~~~~~~~-~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYWPhyTpI~~~aD~DiMLF 190 (363)
T PF04864_consen 121 YKWAG----DASNFKNSD-NPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYWPHYTPITAPADHDIMLF 190 (363)
T ss_dssp EEEEE----ECCCGTT-S--CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS---S-B--SEEEE
T ss_pred ccccc----cHHhhccCC-CCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeecccccccCCCCCCceEEE
Confidence 23222 111111100 123444577899999998742 123445667899999843333332 235699999
Q ss_pred CCCccccCCCCeeEEEE-EcChHHHHHHHHHhhhhhhhcCCC-ccHHHHHHHHc----cCC------c-HHHHHHHHHHH
Q 013210 243 SISKFISGGADIIAGAV-CGPANLVNSMMDLHQGALMLLGPT-MNPKVAFELSE----RIP------H-LGLRMKEHCHR 309 (447)
Q Consensus 243 S~sK~~g~~g~~igG~l-~~~~~~~~~l~~~~~~~~~~~g~~-~~~~~a~~~~~----~~~------~-l~~~~~~~~~~ 309 (447)
|+||.-|-.|.|+ ||. +.++++.+++..+..-. ..|.+ -++.-|..++. +.. . +.--.+.+.++
T Consensus 191 T~SK~TGHAGSR~-GWAlVKD~~Va~kM~~y~~ln--TiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~R 267 (363)
T PF04864_consen 191 TLSKLTGHAGSRF-GWALVKDEEVAKKMTKYMELN--TIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRER 267 (363)
T ss_dssp EHHHHCS-GGG-E-EEEEES-HHHHHHHHHHHHHH--CSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHH
T ss_pred EEecccCcccccc-ceeeecCHHHHHHHHHHHHHh--cccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHH
Confidence 9999999999999 665 56778888887665411 23322 22333333222 111 1 22233455666
Q ss_pred HHHHHHHHHhCCCeeeCCCCCCCchhHH-HHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhhcccccccccccccCcc
Q 013210 310 ALIFARRMKKLGLKVLYPGLEDHPHHEL-LKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQNYAQFGFMAVSLGYYE 386 (447)
Q Consensus 310 ~~~l~~~L~~~~~~v~~p~~~~~p~~~l-~~~~~~~~~g~g~~~~~~l~~--~~~~~~l~~~l~~~~~~g~~~vs~G~~~ 386 (447)
-.+|.+.+.... +...|.++ |++.- .++... ....+.|+.... .+++..+++..++.+ ..|
T Consensus 268 W~~L~~~~~~S~-rFSLq~~~--~~yC~ff~~~~~---psPafAWlkCe~eed~DC~~~l~~~~I~t-------r~G--- 331 (363)
T PF04864_consen 268 WEKLRAAVSASK-RFSLQKFS--PQYCNFFKRVRE---PSPAFAWLKCEREEDEDCYAVLREAKIIT-------RSG--- 331 (363)
T ss_dssp HHHHHHHHCCSS-SEEE---S--CEEETTTTCEEE------SEEEEEESSCGGSSHHHHHHCTTEEE-------EEG---
T ss_pred HHHHHHHHHhcC-ceecCcCC--chhccccccccC---CCCCeEEEecCCcccccHHHHHHhCCccc-------CCC---
Confidence 677777776543 22222221 11000 000000 134589999983 346778877666521 222
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013210 387 TLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 439 (447)
Q Consensus 387 s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 439 (447)
. ..|.+...+|||+- +.++..+.|.+-|..+
T Consensus 332 -------~------------~fga~~ryVRlSml---~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 332 -------V------------LFGADSRYVRLSML---KRDDDFDQLLERLSKL 362 (363)
T ss_dssp -------G------------GGTS-TTEEEEESS---S-HHHHHHHHHHHHCC
T ss_pred -------C------------ccCCCCCeEEEecc---CCHHHHHHHHHHHHhh
Confidence 1 13566789999998 6677677776666543
No 381
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.08 E-value=2.9e-08 Score=106.00 Aligned_cols=271 Identities=13% Similarity=0.080 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhc-C--CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCH
Q 013210 101 VLNLSRQMAALEGTE--AAYCTASGMSAISSVLMQLC-S--SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDH 175 (447)
Q Consensus 101 ~~~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~-~--~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~ 175 (447)
+-+++..|++|.|.+ ++-...++|++-.+++++.. . +.++|+++...|+.+...++..... .|++++.
T Consensus 126 l~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~-~g~~i~~------ 198 (954)
T PRK12566 126 LLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEG-FGFELVV------ 198 (954)
T ss_pred HHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhc-CCcEEEE------
Confidence 457888999999976 44555666665554444432 2 2468999999999999998766654 7888775
Q ss_pred HHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC---CCCCCCccCCCCeEEEeCCC-----cc
Q 013210 176 EMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF---SPLVLSPARLGADVVVHSIS-----KF 247 (447)
Q Consensus 176 ~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~---~~~~~~~~~~g~di~~~S~s-----K~ 247 (447)
+++++.+ .+++..|++.+|| -.|.+.|+++|.+++|++|+++++ .+- -.+.-.|-++|+||++++.. =.
T Consensus 199 ~~~~~~~-~~~~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~~~-~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~ 275 (954)
T PRK12566 199 DAVDNLA-AHAVFGALLQYPD-THGEIRDLRPLIDQLHGQQALACV-AADLLSLLVLTPPGELGADVVLGSTQRFGVPMG 275 (954)
T ss_pred cchhhcC-CCCEEEEEEECCC-CceEEccHHHHHHHHHHcCCEEEE-EeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCC
Confidence 3344455 5678899999986 589999999999999999998663 332 23345688899999988543 33
Q ss_pred ccCCCCeeEEEEEcChHHHHHHH-------------------------HHhhhhhhhcCCCccHH-----HHHHHHccCC
Q 013210 248 ISGGADIIAGAVCGPANLVNSMM-------------------------DLHQGALMLLGPTMNPK-----VAFELSERIP 297 (447)
Q Consensus 248 ~g~~g~~igG~l~~~~~~~~~l~-------------------------~~~~~~~~~~g~~~~~~-----~a~~~~~~~~ 297 (447)
||||. +|++..++++...+- .+|..-.++.-++.... ..++...+-+
T Consensus 276 ~GGP~---ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~ 352 (954)
T PRK12566 276 YGGPH---AAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPE 352 (954)
T ss_pred CCCCC---eeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChH
Confidence 44443 499988887766441 01111101111111111 1122333434
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccc
Q 013210 298 HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGF 377 (447)
Q Consensus 298 ~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~ 377 (447)
.+.+.-++...++.++++.|.+.|+++.... . ++ .+.+.+.. . +..++.+....
T Consensus 353 Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~~-----f-------F~-------~~~v~~~~-~-~~~~~~~a~~~----- 406 (954)
T PRK12566 353 GLKRIAQRVHRLTAILAAGLEAKGIKRLNRH-----F-------FD-------TLTLEVGG-A-QAAIIESAEAA----- 406 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccCC-----c-------cc-------eEEEEccC-C-HHHHHHHHHHC-----
Confidence 4555566678888899999988776554321 0 00 44555531 2 34444443321
Q ss_pred ccccccCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013210 378 MAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 437 (447)
Q Consensus 378 ~~vs~G~~~s~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 437 (447)
.+++. -++++.|.||+. ..++.+++++|.+++.
T Consensus 407 -~~n~r-------------------------~~~~~~~~~s~d-e~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 407 -RINLR-------------------------ILGRGRLGVSLD-ETCDEATVARLFDIFL 439 (954)
T ss_pred -CCeeE-------------------------EeCCCeEEEEeC-CCCCHHHHHHHHHHhc
Confidence 22222 113466889999 7777888888887774
No 382
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.01 E-value=1.2e-07 Score=87.11 Aligned_cols=236 Identities=13% Similarity=0.073 Sum_probs=134.9
Q ss_pred EEeCChHHHHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC----CHHHHHHhhccCCce-EE
Q 013210 118 YCTASGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS----DHEMVNSAIVQGRTK-VL 190 (447)
Q Consensus 118 ~~tsggt~A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~i~~~~t~-lV 190 (447)
+-+-|||.|+..+..-+. -....|-+++|+|...+..+....-. .=....+++.. |++.+...++..... .+
T Consensus 103 vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~-tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~ 181 (410)
T KOG1412|consen 103 VQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFT-TVATYPYWDAENKCVDLEGFLSDLESAPEGSII 181 (410)
T ss_pred eeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCc-eeeeeeeecCCCceecHHHHHHHHhhCCCCcEE
Confidence 556789999988875442 23567999999999998888532111 01234555544 788887777433333 33
Q ss_pred EEEc-CCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCC-CCcc----------CCCC-eEEEeCCCccccCCCCe
Q 013210 191 YFES-ISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLV-LSPA----------RLGA-DVVVHSISKFISGGADI 254 (447)
Q Consensus 191 ~i~~-~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~-~~~~----------~~g~-di~~~S~sK~~g~~g~~ 254 (447)
++.. .+||||.-.. ..+|++..++++.+.+.|-+|.++. .++. +.|. -+++.||+|-+|..+.|
T Consensus 182 iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneR 261 (410)
T KOG1412|consen 182 ILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNER 261 (410)
T ss_pred eeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhccccccc
Confidence 4433 4899998864 5577777788999999999995543 2322 1133 58999999999999999
Q ss_pred eEEEE---EcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCc------HHHHHH----HHHHHHHHHHHHHHhCC
Q 013210 255 IAGAV---CGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPH------LGLRMK----EHCHRALIFARRMKKLG 321 (447)
Q Consensus 255 igG~l---~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~------l~~~~~----~~~~~~~~l~~~L~~~~ 321 (447)
+ |.+ +.++..+..+.....-..+..-..+....|..+..-+.+ ....++ ++.+.|..|++.|..+
T Consensus 262 v-Gnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL- 339 (410)
T KOG1412|consen 262 V-GNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVAL- 339 (410)
T ss_pred c-cceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 9 654 334555544432211111122223333344333333322 111222 3445555555555544
Q ss_pred CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013210 322 LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 371 (447)
Q Consensus 322 ~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~ 371 (447)
..||- |..+- ..-||+++.=-++...+.+.+....
T Consensus 340 ---~TPGt--------WDHI~----~QiGMFSyTGLtp~qV~~li~~h~v 374 (410)
T KOG1412|consen 340 ---KTPGT--------WDHIT----QQIGMFSYTGLTPAQVDHLIENHKV 374 (410)
T ss_pred ---CCCCc--------HHHHH----hhccceeecCCCHHHHHHHHHhceE
Confidence 23441 11111 1345777775466666666665553
No 383
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.71 E-value=7.6e-06 Score=79.51 Aligned_cols=254 Identities=13% Similarity=0.141 Sum_probs=146.2
Q ss_pred cccCCCCchHHHHHHHHHHHhC----C----------C-eEEEeCChHHHHHHHHHHhc-------CCC-----------
Q 013210 92 IYSRHFNPTVLNLSRQMAALEG----T----------E-AAYCTASGMSAISSVLMQLC-------SSG----------- 138 (447)
Q Consensus 92 ~~~r~~~~~~~~l~~~ia~l~g----~----------~-~~~~tsggt~A~~~al~~l~-------~~g----------- 138 (447)
-++-.+.|...+||..+-++++ - + --++-.++++++..++.+.. +.+
T Consensus 102 GFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~ 181 (511)
T KOG0628|consen 102 GFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLA 181 (511)
T ss_pred cceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhh
Confidence 3555678999999977666653 1 1 14666778899888876542 112
Q ss_pred CeE-EEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHHhhccC----CceEEEEEcCCCCCccc--cCHH
Q 013210 139 GHV-VAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQG----RTKVLYFESISNPTLAV--ANIP 206 (447)
Q Consensus 139 d~V-i~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~----~t~lV~i~~~~NptG~v--~~l~ 206 (447)
+-| -+++..|.+..... ...|++.+.++.+ +.+.|+++|+++ -+-.+++-+. ..||.+ -+++
T Consensus 182 ~lV~Y~SDqahssveka~-----~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~-GTT~~ca~D~l~ 255 (511)
T KOG0628|consen 182 RLVAYCSDQAHSSVEKAC-----LIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATL-GTTSSCAFDELE 255 (511)
T ss_pred hheEEecCcccchHHHhH-----hhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEee-cCccccccccHH
Confidence 223 35566666665543 1257778887766 678888888432 2334444332 234444 4799
Q ss_pred HHHHHHHhcCCEEEEeCCCCCCCC-----CccCC---CCeEEEeCCCccccCCCCeeEEEEEcC----------hHHHHH
Q 013210 207 ELSRLAHDKGVTVVVDNTFSPLVL-----SPARL---GADVVVHSISKFISGGADIIAGAVCGP----------ANLVNS 268 (447)
Q Consensus 207 ~I~~la~~~gi~livD~~~~~~~~-----~~~~~---g~di~~~S~sK~~g~~g~~igG~l~~~----------~~~~~~ 268 (447)
+|..+|+++|+++|+|++|++-.+ +..-- .+|-+....||++-..-+...=|+-.. +..++.
T Consensus 256 elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h 335 (511)
T KOG0628|consen 256 ELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKH 335 (511)
T ss_pred HhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcc
Confidence 999999999999999999943321 11111 257777888888876654321122111 111110
Q ss_pred -HH----HHhhhhhhhcCCCccHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHH
Q 013210 269 -MM----DLHQGALMLLGPTMNPKVAFELSE--RIPHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKS 340 (447)
Q Consensus 269 -l~----~~~~~~~~~~g~~~~~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~ 340 (447)
.. .++. +....|-.....-.|..++ +.+.+.+.++++.++++.+.+.+.+-+. ++..|.
T Consensus 336 ~~~~~~~Dyrh-wqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~------------ 402 (511)
T KOG0628|consen 336 AYQGSAPDYRH-WQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKR------------ 402 (511)
T ss_pred hhhccCCCccc-cccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeccc------------
Confidence 00 0111 1112222233334444444 3466777777777777777776655433 444332
Q ss_pred HhccCCCcCcEEEEEeCC-HHHHHHHHHHhhc
Q 013210 341 MANKEYGFGGLLCLDMET-EEKANRLMNYLQN 371 (447)
Q Consensus 341 ~~~~~~g~g~~~~~~l~~-~~~~~~l~~~l~~ 371 (447)
.=++++|.+++ .+..+.|++++..
T Consensus 403 -------~lgLvcFRlk~~N~~ne~Ll~~in~ 427 (511)
T KOG0628|consen 403 -------ILGLVCFRLKGDNEINEALLNRLNS 427 (511)
T ss_pred -------ccceeEEeecCCcHHHHHHHHHHHh
Confidence 22389999983 4456778888875
No 384
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.65 E-value=1.5e-06 Score=83.30 Aligned_cols=212 Identities=10% Similarity=0.060 Sum_probs=133.9
Q ss_pred HHHHHHhCC---CeEEEeCChHHHHHHHHHHhcC---C-----C-----Ce-EEEeCCCchhHHHHHHhhcCcccC-eeE
Q 013210 106 RQMAALEGT---EAAYCTASGMSAISSVLMQLCS---S-----G-----GH-VVAARTLYGGTHALLTHFFPRACN-ITT 167 (447)
Q Consensus 106 ~~ia~l~g~---~~~~~tsggt~A~~~al~~l~~---~-----g-----d~-Vi~~~~~y~~~~~~~~~~~~~~~g-~~~ 167 (447)
.++-++.|- .+-+|++||+-+|..++....- | | +- +.+++.+|.++..... ++. .| -.+
T Consensus 148 ~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa-~lg--~gtd~c 224 (510)
T KOG0629|consen 148 AKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAA-FLG--LGTDHC 224 (510)
T ss_pred HHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHH-Hhc--cCCcee
Confidence 344444443 2579999999999888764321 1 2 22 3456677777766652 222 23 345
Q ss_pred EEeCCC-----CHHHHHHhhcc--CC---ceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccC--
Q 013210 168 TFVDIS-----DHEMVNSAIVQ--GR---TKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPAR-- 234 (447)
Q Consensus 168 ~~v~~~-----d~~~l~~~i~~--~~---t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~-- 234 (447)
..|+.+ ++++||+.|.. .+ +-+|..+..+...|..-||+.|+++|++|+.++|||+++ +++..+...
T Consensus 225 ~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~ 304 (510)
T KOG0629|consen 225 IKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRH 304 (510)
T ss_pred EEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHh
Confidence 566655 78888887622 12 345666666667788889999999999999999999999 445443221
Q ss_pred -C----CCeEEEeCCCccccCCCCeeEEEEEcC-hHHHHHHHHHhhhh-----------------hhhcCCCccHHHHHH
Q 013210 235 -L----GADVVVHSISKFISGGADIIAGAVCGP-ANLVNSMMDLHQGA-----------------LMLLGPTMNPKVAFE 291 (447)
Q Consensus 235 -~----g~di~~~S~sK~~g~~g~~igG~l~~~-~~~~~~l~~~~~~~-----------------~~~~g~~~~~~~a~~ 291 (447)
+ .++-++.+.||++|.+-. . ++...+ +.++.+.......+ ....|-....+--|.
T Consensus 305 kl~Giera~SvtwnpHK~~gaplq-C-sa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWl 382 (510)
T KOG0629|consen 305 KLTGIERANSVTWNPHKLMGAPLQ-C-SAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWL 382 (510)
T ss_pred hccCccccCceeecHHHhhcCcch-h-hHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHH
Confidence 1 478999999999996643 2 333333 33444332211100 112232333444455
Q ss_pred HHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCC
Q 013210 292 LSE--RIPHLGLRMKEHCHRALIFARRMKKLGL 322 (447)
Q Consensus 292 ~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~ 322 (447)
... +...+...+++..++++++.+.|++.+.
T Consensus 383 mwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~ 415 (510)
T KOG0629|consen 383 MWKAKGTQGFEAQVDKCLRLAEYLYDRLREREG 415 (510)
T ss_pred HHHhcccccHHHHHHHHHHHHHHHHHHHHhccc
Confidence 433 4556888999999999999999998865
No 385
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.63 E-value=1.5e-05 Score=75.08 Aligned_cols=236 Identities=17% Similarity=0.162 Sum_probs=135.5
Q ss_pred HHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCC-----CCeEEEeCCC
Q 013210 73 PETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSS-----GGHVVAARTL 147 (447)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~-----gd~Vi~~~~~ 147 (447)
.+.+.+++.+. -.|+. +.....|+..+.+.+|-+.++-|.-|-.|=+..+..++++ |.+.++++..
T Consensus 62 ~~qwaamm~GD-------EAYag--srs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~ 132 (471)
T COG3033 62 DKQWAAMMRGD-------EAYAG--SRSYYALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNY 132 (471)
T ss_pred HHHHHHHhccc-------hhhcc--cccHHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhccccCCccccccccc
Confidence 34455566553 23443 3344678999999999999999999988888877766654 4455555555
Q ss_pred chhHHHHHHhhcCcccCeeEEEeCCC---------------CHHHHHHhhcc---CCceEEEEEcCCCCC-cccc---CH
Q 013210 148 YGGTHALLTHFFPRACNITTTFVDIS---------------DHEMVNSAIVQ---GRTKVLYFESISNPT-LAVA---NI 205 (447)
Q Consensus 148 y~~~~~~~~~~~~~~~g~~~~~v~~~---------------d~~~l~~~i~~---~~t~lV~i~~~~Npt-G~v~---~l 205 (447)
|..+...-.. + .|..++-+..+ |++.|++.|.. +++..|++.-.+|.. |... ++
T Consensus 133 ~FdTTr~h~~---~-ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~ 208 (471)
T COG3033 133 HFDTTRGHIQ---I-NGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANM 208 (471)
T ss_pred eecchhHHHH---h-cCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhH
Confidence 5443332211 1 23333222111 88999998832 356666665444444 4433 57
Q ss_pred HHHHHHHHhcCCEEEEeCCC----CCCCC--Cc-------cCC------CCeEEEeCCCccccCCCCeeEEEEEcChH--
Q 013210 206 PELSRLAHDKGVTVVVDNTF----SPLVL--SP-------ARL------GADVVVHSISKFISGGADIIAGAVCGPAN-- 264 (447)
Q Consensus 206 ~~I~~la~~~gi~livD~~~----~~~~~--~~-------~~~------g~di~~~S~sK~~g~~g~~igG~l~~~~~-- 264 (447)
+++.++|++|++.++.|.+- +.|.. .+ .+. -+|-.+.|.-|---.. |||+++.+++
T Consensus 209 r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvn---mGGfl~~~D~~~ 285 (471)
T COG3033 209 KAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVN---MGGFLCFKDDSF 285 (471)
T ss_pred HHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceec---cccEEEecCccH
Confidence 89999999999999999884 22211 00 000 3688888988875543 7899987654
Q ss_pred --HHHHHHHH---hhhhhhhcCCCccHHHHHH-HHc-cC--CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 013210 265 --LVNSMMDL---HQGALMLLGPTMNPKVAFE-LSE-RI--PHLGLRMKEHCHRALIFARRMKKLGLKVLYPG 328 (447)
Q Consensus 265 --~~~~l~~~---~~~~~~~~g~~~~~~~a~~-~~~-~~--~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~ 328 (447)
+...++.. ..+..+..|..-.-..+.+ .++ .+ .++..|+ ...++|.+.|.+.|..+..|.
T Consensus 286 fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv----~Qv~YL~~~l~~~GVpi~~pa 354 (471)
T COG3033 286 FDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRV----AQVQYLADGLEEAGVPIVQPA 354 (471)
T ss_pred HHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHH----HHHHHHHHHHHhcCCeeEecC
Confidence 44444332 1111111221111122222 111 22 2333444 445678889998888666553
No 386
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.52 E-value=6.9e-06 Score=77.08 Aligned_cols=180 Identities=18% Similarity=0.167 Sum_probs=102.6
Q ss_pred CHHHHHHhhcc-----CCceEEEEEcCCCCCcccc--C--HHHHHHHHHhcCCEEEEeCCCCCCCC--C-------ccCC
Q 013210 174 DHEMVNSAIVQ-----GRTKVLYFESISNPTLAVA--N--IPELSRLAHDKGVTVVVDNTFSPLVL--S-------PARL 235 (447)
Q Consensus 174 d~~~l~~~i~~-----~~t~lV~i~~~~NptG~v~--~--l~~I~~la~~~gi~livD~~~~~~~~--~-------~~~~ 235 (447)
.++++|+.|.+ ..+.++++|.++++.|.-. | .+.|.+++++||+.+|+||+|++... . -++.
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 35667766632 2567899999999999775 2 78999999999999999999944321 1 1223
Q ss_pred CCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhhhhhhhcCCCccHHHHHHHHccCCcHHHHHHHHHHHHHHHHH
Q 013210 236 GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFAR 315 (447)
Q Consensus 236 g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~ 315 (447)
..|+++ |||=+-. ||+.. +++++.. ..++. +.++.|-+.-......+...++. ...++....-.+.|..
T Consensus 334 PpD~vT--FSKK~q~-----gGffh-~~~frpn-~pYri-fNTWmGdP~k~lll~~vv~~I~~-~~Ll~n~~~vG~~l~~ 402 (484)
T KOG1405|consen 334 PPDVVT--FSKKFQT-----GGFFH-DEEFRPN-EPYRI-FNTWMGDPSKNLLLEEVVQEIKR-EDLLNNVAHVGKALLK 402 (484)
T ss_pred Ccccee--hhhhhhc-----Ccccc-CcccCCC-chHHH-hhhhcCChHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHH
Confidence 578877 7787763 36543 3333211 01121 11234433222222222222211 1122333344445555
Q ss_pred HHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccC
Q 013210 316 RMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGY 384 (447)
Q Consensus 316 ~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~ 384 (447)
.|.++. -.+|+.- +...|.|-++++.+++...-..|+..++. .++.+||
T Consensus 403 gL~~Lq--~~~p~~~------------~~~RGrGTF~a~d~ps~~~Rdk~i~~~~~------nGv~~GG 451 (484)
T KOG1405|consen 403 GLLELQ--AKYPGKI------------NNLRGRGTFIAWDCPSGSIRDKLILIARL------NGVNLGG 451 (484)
T ss_pred HHHHHH--HhCchhh------------hcccccceEEEEeCCChHHHHHHHHHHHH------cCceecc
Confidence 554431 1233311 12237899999999987767788888876 4667774
No 387
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.47 E-value=1.5e-05 Score=77.11 Aligned_cols=150 Identities=14% Similarity=0.213 Sum_probs=94.8
Q ss_pred CeEEEeCChHH-HHHHHHHHhc--CCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC--------CHHHHHHhhc
Q 013210 115 EAAYCTASGMS-AISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--------DHEMVNSAIV 183 (447)
Q Consensus 115 ~~~~~tsggt~-A~~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--------d~~~l~~~i~ 183 (447)
..+++++-+|- ++.+++.++. ..++.|+.+...|.+.+..+. . .|.++..|+.. |++.+++.++
T Consensus 75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~----~-AGl~~~vV~~~~~~d~l~td~~~ie~~i~ 149 (389)
T PF05889_consen 75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIE----R-AGLEPVVVENVLEGDELITDLEAIEAKIE 149 (389)
T ss_dssp CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHH----H-TT-EEEEE-EEEETTEEEEHHHHHHHHHH
T ss_pred cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHH----h-cCCeEEEeeccCCCCeeeccHHHHHHHHH
Confidence 45777765543 3445555553 457899999999888777763 2 67777776632 7788888773
Q ss_pred c--CCceEEEEEcCCCCCccccC-HHHHHHHHHhcCCEEEEeCCCCCCC---C----CccCC-CCeEEEeCCCccccCCC
Q 013210 184 Q--GRTKVLYFESISNPTLAVAN-IPELSRLAHDKGVTVVVDNTFSPLV---L----SPARL-GADVVVHSISKFISGGA 252 (447)
Q Consensus 184 ~--~~t~lV~i~~~~NptG~v~~-l~~I~~la~~~gi~livD~~~~~~~---~----~~~~~-g~di~~~S~sK~~g~~g 252 (447)
+ ++..+.++.++.-..+...| +++|+++|++||+..++-++|+--. . ..... -+|+++.|.-|-|-.|.
T Consensus 150 ~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VPv 229 (389)
T PF05889_consen 150 ELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVPV 229 (389)
T ss_dssp HHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEES
T ss_pred HhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEecC
Confidence 2 35578888888888888988 9999999999999999999984200 0 01112 36888888888887552
Q ss_pred CeeEEEE-Ec-ChHHHHHHHHH
Q 013210 253 DIIAGAV-CG-PANLVNSMMDL 272 (447)
Q Consensus 253 ~~igG~l-~~-~~~~~~~l~~~ 272 (447)
||.+ ++ .+..+..+...
T Consensus 230 ---Ggai~As~~~~~i~~vs~~ 248 (389)
T PF05889_consen 230 ---GGAIMASFDPSGILAVSKE 248 (389)
T ss_dssp ---SHEEEEESSHHHHHHHHHT
T ss_pred ---CCcEEEecCHHHHHHHHHH
Confidence 4444 33 45566666543
No 388
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.47 E-value=2.6e-05 Score=74.19 Aligned_cols=282 Identities=11% Similarity=0.025 Sum_probs=155.7
Q ss_pred chHHHHHHHHHHHhCCCe---EEEeCCh-HHHHHHHHHHhcCCCCe--EEEeCCCchhHHHHHHhhcCcccCeeEE----
Q 013210 99 PTVLNLSRQMAALEGTEA---AYCTASG-MSAISSVLMQLCSSGGH--VVAARTLYGGTHALLTHFFPRACNITTT---- 168 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~~---~~~tsgg-t~A~~~al~~l~~~gd~--Vi~~~~~y~~~~~~~~~~~~~~~g~~~~---- 168 (447)
..+.++++.+.++++.++ |+|..|| |....++...++..+.. |.+-..+-.+.-.. +.+.....-..+.
T Consensus 50 ~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA-~~~~~~~~~~~~~~~~~ 128 (365)
T COG1932 50 NVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEA-KKVGKQPKLIDARIEEA 128 (365)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCceeEeeeehhHhHHHHH-HHhcccccccccceecc
Confidence 456789999999998754 7777654 77777888888765432 44433322222111 1121100000111
Q ss_pred -EeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccC-HHHHHHHHHhcCCEEEEeCCCCCC--CCCccCCCCeEEEeCC
Q 013210 169 -FVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN-IPELSRLAHDKGVTVVVDNTFSPL--VLSPARLGADVVVHSI 244 (447)
Q Consensus 169 -~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~-l~~I~~la~~~gi~livD~~~~~~--~~~~~~~g~di~~~S~ 244 (447)
+-...+++.+. + .++...|.+++-..-+|+-.+ ...+. .+.++++|.+-.-+ .++.. ..|++.++.
T Consensus 129 ~~~~iP~~~~~~--~-~~~~ayv~~~~NeTi~Gv~v~~~p~~~-----~~~~~v~D~SS~ilsr~iDvs--k~dviyaga 198 (365)
T COG1932 129 GYGSIPDLSKWD--F-SDNDAYVHFCWNETISGVEVPELPDIG-----SDGLLVADASSAILSRPIDVS--KYDVIYAGA 198 (365)
T ss_pred CccCCCChhhcc--c-CCCccEEEEecCCcccceEccCCCCCC-----CCceEEEecccHHhcCCCChh--HcceEEEeh
Confidence 11111444333 3 333445666543334455443 22221 12889999875222 23333 468999999
Q ss_pred CccccCCCCeeEEEEEcChHHHHHHHHH--------hhhh-hhhcCCCccHHHHHHHHccCCc------HHHHHHHHHHH
Q 013210 245 SKFISGGADIIAGAVCGPANLVNSMMDL--------HQGA-LMLLGPTMNPKVAFELSERIPH------LGLRMKEHCHR 309 (447)
Q Consensus 245 sK~~g~~g~~igG~l~~~~~~~~~l~~~--------~~~~-~~~~g~~~~~~~a~~~~~~~~~------l~~~~~~~~~~ 309 (447)
.|.+|+.| + ++++.++++++++... .... .-..-++++..+.+.....+++ +....++-.++
T Consensus 199 QKnlGpaG--l-tvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~k 275 (365)
T COG1932 199 QKNLGPAG--L-TVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAK 275 (365)
T ss_pred hhccCccc--e-EEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 99999988 4 8889999888877542 1100 0012244444444433333333 45566677888
Q ss_pred HHHHHHHHHhCCCeee--CCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccCccc
Q 013210 310 ALIFARRMKKLGLKVL--YPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYET 387 (447)
Q Consensus 310 ~~~l~~~L~~~~~~v~--~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~~~~~~g~~~vs~G~~~s 387 (447)
++.|.+.+.+.++-.+ .+. .+ .-..++|.+.+.+-...|+..+...+ .+.+-+.
T Consensus 276 a~~LY~~id~s~fy~~~v~~~-~R----------------S~mnV~f~~~~~~ld~~fv~eae~~g-----l~~lkGh-- 331 (365)
T COG1932 276 AQLLYDWIDKSDFYRNLVAKA-NR----------------SRMNVTFTLVDAELDKGFVAEAEAAG-----LIYLKGH-- 331 (365)
T ss_pred HHHHHHHHHhCCccccccchh-hc----------------cceeEEEEcCcHHHHHHHHHHHHHcC-----Cceeccc--
Confidence 9999999988765111 111 11 11267788877666677888777643 1122111
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013210 388 LMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 441 (447)
Q Consensus 388 ~~~~~a~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 441 (447)
. ..+-+|+|++ ..-.-+.++.|...++.+.+
T Consensus 332 ----r------------------~vgGmRasiy-nA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 332 ----R------------------SVGGLRASIY-NAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred ----c------------------CCCceeeeee-cCCCHHHHHHHHHHHHHHHH
Confidence 1 1244999999 76566667777777766543
No 389
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.34 E-value=2.4e-05 Score=73.31 Aligned_cols=228 Identities=13% Similarity=0.146 Sum_probs=130.0
Q ss_pred eCChHHHHHHHHH--HhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEE---eCCC----CHHHHHHhhcc-CCceE
Q 013210 120 TASGMSAISSVLM--QLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTF---VDIS----DHEMVNSAIVQ-GRTKV 189 (447)
Q Consensus 120 tsggt~A~~~al~--~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~---v~~~----d~~~l~~~i~~-~~t~l 189 (447)
|=|||-|+..+.. +..-++..|.++.|+|+.....+. ..|..+.+ .+.. |.+.+.+.+.. +.-..
T Consensus 126 ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~-----~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ 200 (427)
T KOG1411|consen 126 TLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFK-----DAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSI 200 (427)
T ss_pred eccCcchhhHHHHHHHhhccccceeecCCcccccCcccc-----ccCcceeeeeeccccccccchHHHHHHHhcCCCCcE
Confidence 4577777766543 334568899999999998776663 25655543 3332 55554444422 22223
Q ss_pred EEE-EcCCCCCccccC---HHHHHHHHHhcCCEEEEeCCCCCCCC-Ccc----------CC-CCeEEEeCCCccccCCCC
Q 013210 190 LYF-ESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVL-SPA----------RL-GADVVVHSISKFISGGAD 253 (447)
Q Consensus 190 V~i-~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~-~~~----------~~-g~di~~~S~sK~~g~~g~ 253 (447)
|++ ...+||||.-.. .++|.++.++.+.+-++|-+|.+|.- +.. +. +.-+++.|+.|-+|..|.
T Consensus 201 ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgE 280 (427)
T KOG1411|consen 201 ILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGE 280 (427)
T ss_pred EEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhh
Confidence 333 456899998763 67888889999999999999955532 111 11 345789999999999999
Q ss_pred eeEEEE---EcChHHHHHHHH----HhhhhhhhcCCCccHHHHHHHHccC-------CcHHHHHHHHHHHHHHHHHHHHh
Q 013210 254 IIAGAV---CGPANLVNSMMD----LHQGALMLLGPTMNPKVAFELSERI-------PHLGLRMKEHCHRALIFARRMKK 319 (447)
Q Consensus 254 ~igG~l---~~~~~~~~~l~~----~~~~~~~~~g~~~~~~~a~~~~~~~-------~~l~~~~~~~~~~~~~l~~~L~~ 319 (447)
|+ |++ +.+.+...++.. .-.+ ..+..+......+...+... .++....+++...++.|.+.|..
T Consensus 281 Rv-Ga~svvc~~ad~A~rV~SQlk~liRp-mYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~ 358 (427)
T KOG1411|consen 281 RV-GALSVVCKDADEAKRVESQLKILIRP-MYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEK 358 (427)
T ss_pred cc-ceeEEEecCHHHHHHHHHHHHHHhcc-cccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhc
Confidence 99 554 445555544432 2111 11122222222222222211 11223344556666666666655
Q ss_pred CCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhh
Q 013210 320 LGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQ 370 (447)
Q Consensus 320 ~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~ 370 (447)
.+... ...+..++ =|||+|.--++++.+.+.++..
T Consensus 359 ~gs~~---------~W~hI~~Q-------IGMF~fTgl~peQv~~l~ke~~ 393 (427)
T KOG1411|consen 359 EGSPG---------NWSHITKQ-------IGMFCFTGLNPEQVDWLTKEYH 393 (427)
T ss_pred CCCCc---------cHHHHHHh-------hheeeecCCCHHHHHHHHhhhe
Confidence 43211 11222222 2488888768887777766654
No 390
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.30 E-value=1.4e-05 Score=80.39 Aligned_cols=223 Identities=16% Similarity=0.163 Sum_probs=134.5
Q ss_pred CchHHHHHHHHHHHhCCCeEEEe-CChHHHHHHHH---HHhc-CCCC---e-EEEeCCCchhHHHHHHhhcCcccCeeEE
Q 013210 98 NPTVLNLSRQMAALEGTEAAYCT-ASGMSAISSVL---MQLC-SSGG---H-VVAARTLYGGTHALLTHFFPRACNITTT 168 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~~t-sggt~A~~~al---~~l~-~~gd---~-Vi~~~~~y~~~~~~~~~~~~~~~g~~~~ 168 (447)
.....+|++.+..+.|-+.+.|- +||.++-.+.| ++.. .+|+ . -+++...|+...... .+.|.+++
T Consensus 581 ~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA-----~Magmkvv 655 (1001)
T KOG2040|consen 581 QQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASA-----AMAGMKVV 655 (1001)
T ss_pred HHHHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhH-----HhcCCEEE
Confidence 34567889999999999887664 56666555444 4433 3342 2 345555666555554 23688888
Q ss_pred EeCCC-----CHHHHHHhhc--cCCceEEEEEcCCCCCccc-cCHHHHHHHHHhcCCEEEEeCCC--CCC-CCCccCCCC
Q 013210 169 FVDIS-----DHEMVNSAIV--QGRTKVLYFESISNPTLAV-ANIPELSRLAHDKGVTVVVDNTF--SPL-VLSPARLGA 237 (447)
Q Consensus 169 ~v~~~-----d~~~l~~~i~--~~~t~lV~i~~~~NptG~v-~~l~~I~~la~~~gi~livD~~~--~~~-~~~~~~~g~ 237 (447)
.|..+ |..+|++..+ .++..++.+..|+. .|.. ..+++++++.|+||--+..|.+- +.. ..+|-++|.
T Consensus 656 pV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~Ga 734 (1001)
T KOG2040|consen 656 PVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGA 734 (1001)
T ss_pred EeeccCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCccceecccCCccccc
Confidence 87765 7778877653 24677888888875 3555 46999999999999999999885 222 357888999
Q ss_pred eEEEeCCCccccCC----CCeeEEEEEcChHHHHHHHHH------hhhh--------hhhcCCCccHHHHHH--HHccCC
Q 013210 238 DVVVHSISKFISGG----ADIIAGAVCGPANLVNSMMDL------HQGA--------LMLLGPTMNPKVAFE--LSERIP 297 (447)
Q Consensus 238 di~~~S~sK~~g~~----g~~igG~l~~~~~~~~~l~~~------~~~~--------~~~~g~~~~~~~a~~--~~~~~~ 297 (447)
|+.-.-+||.|..| |.-+ |=+..++.+...+-.. +.+. ...+|+..-....|+ .+-+..
T Consensus 735 DV~HLNLHKTFcIPHGGGGPg~-gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~ 813 (1001)
T KOG2040|consen 735 DVCHLNLHKTFCIPHGGGGPGM-GPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSG 813 (1001)
T ss_pred cceeecccceeeecCCCCCCCC-CccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhccc
Confidence 99999999998633 1112 4444444443332110 0000 001121111112222 233334
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 013210 298 HLGLRMKEHCHRALIFARRMKKLGLKVLYPG 328 (447)
Q Consensus 298 ~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~ 328 (447)
.+....+-..-++.++..+|+.+ +++.+-+
T Consensus 814 GL~~as~~AiLNaNYMakRLe~h-Ykil~~~ 843 (1001)
T KOG2040|consen 814 GLKDASKIAILNANYMAKRLESH-YKILFRG 843 (1001)
T ss_pred ccchhhHHHhhhhHHHHHHHhhc-cceeEec
Confidence 44444444567788999999875 3444433
No 391
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.75 E-value=7.5e-05 Score=69.02 Aligned_cols=158 Identities=15% Similarity=0.174 Sum_probs=114.4
Q ss_pred HHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhcCCC---CeEEEeCCCchhHHHHHHhhcCcccCeeE----EEeCCC-
Q 013210 104 LSRQMAALEGTE--AAYCTASGMSAISSVLMQLCSSG---GHVVAARTLYGGTHALLTHFFPRACNITT----TFVDIS- 173 (447)
Q Consensus 104 l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l~~~g---d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~----~~v~~~- 173 (447)
.-..++.+.|+. .+.+.++-|.-++..+.++.+|. -+|+...-.|++-+-.+...+.. .|+.+ +.+.+.
T Consensus 116 il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~l-hG~~~e~sm~~iePRE 194 (465)
T KOG3846|consen 116 ILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKL-HGISPENSMIQIEPRE 194 (465)
T ss_pred hhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhh-cCCChHHheEEecccc
Confidence 445677778874 37788888888888888887764 36888888888766666444332 45432 122221
Q ss_pred -----CHHHHHHhhcc--CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCC
Q 013210 174 -----DHEMVNSAIVQ--GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSI 244 (447)
Q Consensus 174 -----d~~~l~~~i~~--~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~ 244 (447)
..+++.+.|+. +..++|++..++.-||...++.+|-..-+..|+++-.|-++ +..+....++|+|+.+.+.
T Consensus 195 GEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCS 274 (465)
T KOG3846|consen 195 GEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCS 274 (465)
T ss_pred cccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEee
Confidence 34555555532 45788999999999999999999997777789999999988 5566667788999999999
Q ss_pred CccccCCCCeeEEEEEcC
Q 013210 245 SKFISGGADIIAGAVCGP 262 (447)
Q Consensus 245 sK~~g~~g~~igG~l~~~ 262 (447)
.|++.....-|||..+-.
T Consensus 275 YKYlnaGaGgIgGlFvHe 292 (465)
T KOG3846|consen 275 YKYLNAGAGGIGGLFVHE 292 (465)
T ss_pred ecccccCCCccceeeeeh
Confidence 999975444477776644
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.75 E-value=0.016 Score=59.22 Aligned_cols=138 Identities=20% Similarity=0.234 Sum_probs=90.9
Q ss_pred HHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHh-cCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHH
Q 013210 103 NLSRQMAALEGTE--AAYCTASGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVN 179 (447)
Q Consensus 103 ~l~~~ia~l~g~~--~~~~tsggt~A~~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 179 (447)
..+..|+++.|-+ ++-+---||+|-.+..+.. ..+++++++....|+.+...++.... .+|+++.. .|+++..
T Consensus 167 NyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~-~~~i~v~~---~~~~~~~ 242 (1001)
T KOG2040|consen 167 NYQTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAK-GFGIKVVV---SDIKEAD 242 (1001)
T ss_pred hhHHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhcccc-ccceeEEe---cCHHHhh
Confidence 3445566666642 2333444555555443332 45677899999999999988843332 25666444 3444433
Q ss_pred HhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCcc
Q 013210 180 SAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKF 247 (447)
Q Consensus 180 ~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~ 247 (447)
.. ..+...|++..|.. -|.+.|..++++.+++.|.++++-.-- --+...|.++|+|++++|...+
T Consensus 243 ~s--~~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRF 309 (1001)
T KOG2040|consen 243 YS--SKDVSGVLVQYPDT-EGSVLDFDELVELAHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRF 309 (1001)
T ss_pred cc--ccceeEEEEEcCCC-CCcccCHHHHHHHhhccCceEEEeehhhHHHccCChhhcCceeeecccccc
Confidence 22 34678889988865 589999999999999999887654222 2234567889999999987764
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.13 E-value=0.0036 Score=56.97 Aligned_cols=161 Identities=15% Similarity=0.257 Sum_probs=94.4
Q ss_pred HHHHHHHHHhCC---CeEEEeC--ChHHHHHHHHHHhcC--C-CCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC--
Q 013210 103 NLSRQMAALEGT---EAAYCTA--SGMSAISSVLMQLCS--S-GGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI-- 172 (447)
Q Consensus 103 ~l~~~ia~l~g~---~~~~~ts--ggt~A~~~al~~l~~--~-gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~-- 172 (447)
++...+-.+.|. ..+++++ +|+ ++.+.+.++.. | .+.|+-....-.+....+. ..|+++..++.
T Consensus 61 e~a~~~i~l~glhav~nc~vvpl~tgm-slslc~~s~r~krpkakyiiw~ridqks~~ksi~-----~agfepiiie~i~ 134 (432)
T KOG3843|consen 61 EFAKDAIHLAGLHAVANCFVVPLATGM-SLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSII-----HAGFEPIIIENIL 134 (432)
T ss_pred HHHHHHHHHhhhhhhhceeEEeccccc-cHHHHHHHHhhcCCcccEEEEEecchHHHHHHHH-----hcCCCceeeeccc
Confidence 344444444453 4455544 444 35555655532 2 3567767776666655552 24666555442
Q ss_pred --C----CHHHHHHhhccCCce-EEEEEcCCCC-Ccccc-CHHHHHHHHHhcCCEEEEeCCCCCCCC-------CccCC-
Q 013210 173 --S----DHEMVNSAIVQGRTK-VLYFESISNP-TLAVA-NIPELSRLAHDKGVTVVVDNTFSPLVL-------SPARL- 235 (447)
Q Consensus 173 --~----d~~~l~~~i~~~~t~-lV~i~~~~Np-tG~v~-~l~~I~~la~~~gi~livD~~~~~~~~-------~~~~~- 235 (447)
| |++.+++.++.-... .+.+.+..+- .-... .+++|+.+|..|+++-++.++|+--.- ...+.
T Consensus 135 d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~g 214 (432)
T KOG3843|consen 135 DGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECG 214 (432)
T ss_pred cchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhc
Confidence 2 788888877432222 3333322211 11222 499999999999999999999842110 11122
Q ss_pred CCeEEEeCCCccccCCCCeeEEEEEc--ChHHHHHHHHH
Q 013210 236 GADVVVHSISKFISGGADIIAGAVCG--PANLVNSMMDL 272 (447)
Q Consensus 236 g~di~~~S~sK~~g~~g~~igG~l~~--~~~~~~~l~~~ 272 (447)
.+|.++.|+-|.|..| +||+++. ++.+++.+.+.
T Consensus 215 rida~vqsldknf~vp---vggaiia~fk~n~iq~iak~ 250 (432)
T KOG3843|consen 215 RIDAFVQSLDKNFMVP---VGGAIIAAFKDNFIQEIAKM 250 (432)
T ss_pred cHHHHHHHhhhcceee---cchhHhhHhHHHHHHHHHHh
Confidence 3689999999999976 6788754 55667666554
No 394
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.89 E-value=0.0027 Score=54.38 Aligned_cols=49 Identities=14% Similarity=0.320 Sum_probs=41.0
Q ss_pred HHHHHHHHHHh----C------CCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchh
Q 013210 102 LNLSRQMAALE----G------TEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGG 150 (447)
Q Consensus 102 ~~l~~~ia~l~----g------~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~ 150 (447)
.++|+.+|+++ | .+.+++|+|+++|+.++++.++.+||.|+++.|.|++
T Consensus 95 ~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 95 ANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 45666666664 4 2459999999999999999999999999999999974
No 395
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=95.48 E-value=0.72 Score=42.91 Aligned_cols=241 Identities=13% Similarity=0.105 Sum_probs=122.7
Q ss_pred CchHHHHHHHHHHHhCCCe---EEEe-CChHHHHHHHHHHhc--CCC---CeEEEeCCCchhHHHHHHhhcCcccCee-E
Q 013210 98 NPTVLNLSRQMAALEGTEA---AYCT-ASGMSAISSVLMQLC--SSG---GHVVAARTLYGGTHALLTHFFPRACNIT-T 167 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~---~~~t-sggt~A~~~al~~l~--~~g---d~Vi~~~~~y~~~~~~~~~~~~~~~g~~-~ 167 (447)
...++..+..+.++++.++ ++|. .|||.-..++...++ +.| |-|++-...-.+.-+.- + +|.. .
T Consensus 51 ~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAk-----k-~~~~~~ 124 (370)
T KOG2790|consen 51 AKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAK-----K-YGTPNI 124 (370)
T ss_pred HHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccccccchhhhccccCCccceEEeccccHHHHHHHH-----h-hCCceE
Confidence 3456788888888888643 6665 455655555544554 444 56776665433333322 2 2321 1
Q ss_pred EE--------eCCCCHHHHHHhhccCCceEEEEEcCCCCC--ccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCccCC-C
Q 013210 168 TF--------VDISDHEMVNSAIVQGRTKVLYFESISNPT--LAVANIPELSRLAHDKGVTVVVDNTFSPLVLSPARL-G 236 (447)
Q Consensus 168 ~~--------v~~~d~~~l~~~i~~~~t~lV~i~~~~Npt--G~v~~l~~I~~la~~~gi~livD~~~~~~~~~~~~~-g 236 (447)
+. -...|.+.++. +++.+.|+.|. |+| |.-.+ .+- +-.-+|.++++|-.- .|.-+|.+. .
T Consensus 125 V~~~~k~y~ygkvPd~~~w~~---~~da~yvyyCa--NETVHGVEf~--~~P-~~~~~~~vlVaDmSS-nflSrpvDvsk 195 (370)
T KOG2790|consen 125 VIPKLKSYTYGKVPDPSTWEL---NPDASYVYYCA--NETVHGVEFD--FIP-VNDPKGAVLVADMSS-NFLSRPVDVSK 195 (370)
T ss_pred EeccccccccCcCCChhhccc---CCCccEEEEec--CceeeceecC--CCC-CCCCCCceEEEeccc-chhcCCccchh
Confidence 11 12336666664 55667777653 444 33321 111 223468899999653 333333332 2
Q ss_pred CeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHhh-----------hhhhhcCCCccHHHHHHHHccC---CcHHHH
Q 013210 237 ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ-----------GALMLLGPTMNPKVAFELSERI---PHLGLR 302 (447)
Q Consensus 237 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~-----------~~~~~~g~~~~~~~a~~~~~~~---~~l~~~ 302 (447)
.+++.....|..|+.|.. .++.+++++........ .....+.++......-+.+..+ ..+...
T Consensus 196 ~gvi~aGAQKN~G~aG~T---vvivr~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~ 272 (370)
T KOG2790|consen 196 FGVIFAGAQKNVGPAGVT---VVIVRKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAM 272 (370)
T ss_pred cceEEeccccccCccccE---EEEEehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHH
Confidence 457777899999998854 35667776654322110 0111112222222222222211 123333
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhh
Q 013210 303 MKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQ 370 (447)
Q Consensus 303 ~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~l~~~l~ 370 (447)
.+.-.+..+.+.+.+.+...-...|-.+... .. ..+.|.+...+--.+|++...
T Consensus 273 e~~n~~KskllYd~iD~s~gfy~cpVe~~~R------S~--------MNV~Fri~~d~Le~eFLkeA~ 326 (370)
T KOG2790|consen 273 EKLNQEKSKLLYDAIDNSNGFYRCPVEPSVR------SR--------MNVPFRIEKDELEAEFLKEAA 326 (370)
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEcccchhhh------hh--------cccceeecchHHHHHHHHHHH
Confidence 3444677788899998874434444322211 11 156677775554456665544
No 396
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=70.84 E-value=35 Score=30.95 Aligned_cols=95 Identities=18% Similarity=0.131 Sum_probs=52.6
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEE-EeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCC
Q 013210 118 YCTASGMSAISSVLMQLCSSGGHVV-AARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESIS 196 (447)
Q Consensus 118 ~~tsggt~A~~~al~~l~~~gd~Vi-~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~ 196 (447)
++..+|..+-.. +.+|++.+-+|. +....-......+ .. .|+++...+.+|.+.|.+++ + ....|++..+.
T Consensus 3 V~GatG~~G~~v-~~~L~~~~~~V~~l~R~~~~~~~~~l----~~-~g~~vv~~d~~~~~~l~~al-~-g~d~v~~~~~~ 74 (233)
T PF05368_consen 3 VTGATGNQGRSV-VRALLSAGFSVRALVRDPSSDRAQQL----QA-LGAEVVEADYDDPESLVAAL-K-GVDAVFSVTPP 74 (233)
T ss_dssp EETTTSHHHHHH-HHHHHHTTGCEEEEESSSHHHHHHHH----HH-TTTEEEES-TT-HHHHHHHH-T-TCSEEEEESSC
T ss_pred EECCccHHHHHH-HHHHHhCCCCcEEEEeccchhhhhhh----hc-ccceEeecccCCHHHHHHHH-c-CCceEEeecCc
Confidence 344456666433 345555664444 3444311122222 22 58898898999999999999 5 34455555544
Q ss_pred CCCccccCHHHHHHHHHhcCCEEE
Q 013210 197 NPTLAVANIPELSRLAHDKGVTVV 220 (447)
Q Consensus 197 NptG~v~~l~~I~~la~~~gi~li 220 (447)
.......-...+++.|++.|+-.+
T Consensus 75 ~~~~~~~~~~~li~Aa~~agVk~~ 98 (233)
T PF05368_consen 75 SHPSELEQQKNLIDAAKAAGVKHF 98 (233)
T ss_dssp SCCCHHHHHHHHHHHHHHHT-SEE
T ss_pred chhhhhhhhhhHHHhhhccccceE
Confidence 333333345678888888886444
No 397
>PLN02476 O-methyltransferase
Probab=70.24 E-value=59 Score=30.81 Aligned_cols=121 Identities=16% Similarity=0.219 Sum_probs=70.3
Q ss_pred CchHHHHHHHHHHHhCCCeE--EEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCee--EEEeCCC
Q 013210 98 NPTVLNLSRQMAALEGTEAA--YCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNIT--TTFVDIS 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~--~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~--~~~v~~~ 173 (447)
.+...++-..++++.++..+ +-|..|..++.++. + +.++.+|++.+..-. .....+..+.+ .|.. +..+..+
T Consensus 103 ~~~~g~lL~~L~~~~~ak~VLEIGT~tGySal~lA~-a-l~~~G~V~TiE~d~e-~~~~Ar~n~~~-aGl~~~I~li~Gd 178 (278)
T PLN02476 103 SPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAVAL-V-LPESGCLVACERDSN-SLEVAKRYYEL-AGVSHKVNVKHGL 178 (278)
T ss_pred CHHHHHHHHHHHHhcCCCeEEEecCCCCHHHHHHHH-h-CCCCCEEEEEECCHH-HHHHHHHHHHH-cCCCCcEEEEEcC
Confidence 34556777888888888875 57888888887764 3 344557777665432 33444344433 4543 4444444
Q ss_pred CHHHHHHhhc---cCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC
Q 013210 174 DHEMVNSAIV---QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 174 d~~~l~~~i~---~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~ 225 (447)
-.+.|.+... .+.-.+|++...- .....-++.+.++.+ .|.++++|++.
T Consensus 179 A~e~L~~l~~~~~~~~FD~VFIDa~K--~~Y~~y~e~~l~lL~-~GGvIV~DNvL 230 (278)
T PLN02476 179 AAESLKSMIQNGEGSSYDFAFVDADK--RMYQDYFELLLQLVR-VGGVIVMDNVL 230 (278)
T ss_pred HHHHHHHHHhcccCCCCCEEEECCCH--HHHHHHHHHHHHhcC-CCcEEEEecCc
Confidence 3444544331 1346789987642 112222445555553 47778899996
No 398
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=65.94 E-value=24 Score=28.28 Aligned_cols=88 Identities=18% Similarity=0.225 Sum_probs=54.3
Q ss_pred HHHHHhhcCcccCeeEEEeCCC-CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhc--CCEEEEeCCCCC-
Q 013210 152 HALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK--GVTVVVDNTFSP- 227 (447)
Q Consensus 152 ~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~--gi~livD~~~~~- 227 (447)
...+..++.+ .|.++..++.+ +.+++.+.+.+.+..+|.+.... +.......++++..|+. ++.+++=..+..
T Consensus 17 l~~la~~l~~-~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~t~ 93 (121)
T PF02310_consen 17 LLYLAAYLRK-AGHEVDILDANVPPEELVEALRAERPDVVGISVSM--TPNLPEAKRLARAIKERNPNIPIVVGGPHATA 93 (121)
T ss_dssp HHHHHHHHHH-TTBEEEEEESSB-HHHHHHHHHHTTCSEEEEEESS--STHHHHHHHHHHHHHTTCTTSEEEEEESSSGH
T ss_pred HHHHHHHHHH-CCCeEEEECCCCCHHHHHHHHhcCCCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCCEEEEECCchhc
Confidence 3344455555 69999998776 56888777756678888875543 33445567777777776 778887665521
Q ss_pred CCCCccC--CCCeEEEe
Q 013210 228 LVLSPAR--LGADVVVH 242 (447)
Q Consensus 228 ~~~~~~~--~g~di~~~ 242 (447)
.+....+ .++|.++.
T Consensus 94 ~~~~~l~~~~~~D~vv~ 110 (121)
T PF02310_consen 94 DPEEILREYPGIDYVVR 110 (121)
T ss_dssp HHHHHHHHHHTSEEEEE
T ss_pred ChHHHhccCcCcceecC
Confidence 1111222 46676653
No 399
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=65.00 E-value=22 Score=33.86 Aligned_cols=110 Identities=19% Similarity=0.204 Sum_probs=65.1
Q ss_pred EEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEE-E--E-cC----CCCCcccc-C---HHHH
Q 013210 141 VVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLY-F--E-SI----SNPTLAVA-N---IPEL 208 (447)
Q Consensus 141 Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~-i--~-~~----~NptG~v~-~---l~~I 208 (447)
+.+...+|.+....+...... ........|.-|.+.+.+.+++.++.+|+ + | ++ .+|.-.++ . ---|
T Consensus 30 ~~~DkLTYAgn~~~l~~~~~~-~~~~fv~~DI~D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~L 108 (340)
T COG1088 30 VNLDKLTYAGNLENLADVEDS-PRYRFVQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTL 108 (340)
T ss_pred EEEecccccCCHHHHHhhhcC-CCceEEeccccCHHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHH
Confidence 557778999998888554432 23444444555889999888443444433 2 1 11 22222221 1 2367
Q ss_pred HHHHHhcCC---EEE--EeCCCCCCCCC-----------c------cCCCCeEEEeCCCccccCC
Q 013210 209 SRLAHDKGV---TVV--VDNTFSPLVLS-----------P------ARLGADVVVHSISKFISGG 251 (447)
Q Consensus 209 ~~la~~~gi---~li--vD~~~~~~~~~-----------~------~~~g~di~~~S~sK~~g~~ 251 (447)
.+.++++.. ++| .||+|+.+..+ | .+-+.|.++.+..+.||.|
T Consensus 109 LEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TYglp 173 (340)
T COG1088 109 LEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYGLP 173 (340)
T ss_pred HHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHcCCc
Confidence 777888763 333 79999665432 1 1125688888888888876
No 400
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=59.93 E-value=94 Score=29.81 Aligned_cols=102 Identities=20% Similarity=0.194 Sum_probs=54.5
Q ss_pred hCCCeEEEeCChHHHHHHHHHHhcCCCC--eEEEeC--CCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCc
Q 013210 112 EGTEAAYCTASGMSAISSVLMQLCSSGG--HVVAAR--TLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRT 187 (447)
Q Consensus 112 ~g~~~~~~tsggt~A~~~al~~l~~~gd--~Vi~~~--~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t 187 (447)
+....+++|-|-+......|+...+.|. +|++.+ |.+.+ ...... +.+ .|++++++.-. .+-..+ . ++
T Consensus 113 i~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G-~~~a~~-L~~-~gI~vtlI~Ds---a~~~~m-~-~v 184 (301)
T TIGR00511 113 IRDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQG-HITAKE-LRD-YGIPVTLIVDS---AVRYFM-K-EV 184 (301)
T ss_pred cCCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchH-HHHHHH-HHH-CCCCEEEEehh---HHHHHH-H-hC
Confidence 3334467776655555555555544443 555544 55555 444433 333 69999987522 333334 2 34
Q ss_pred eEEEE--EcCCCCCccccC---HHHHHHHHHhcCCEEEEe
Q 013210 188 KVLYF--ESISNPTLAVAN---IPELSRLAHDKGVTVVVD 222 (447)
Q Consensus 188 ~lV~i--~~~~NptG~v~~---l~~I~~la~~~gi~livD 222 (447)
..|++ +.+. ..|.+.. --.++-+|+.++++|++=
T Consensus 185 d~VivGad~v~-~nG~v~nkiGT~~lA~~Ak~~~vPv~V~ 223 (301)
T TIGR00511 185 DHVVVGADAIT-ANGALINKIGTSQLALAAREARVPFMVA 223 (301)
T ss_pred CEEEECccEEe-cCCCEEEHHhHHHHHHHHHHhCCCEEEE
Confidence 45554 2222 2343332 236777889999887753
No 401
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=57.80 E-value=1.5e+02 Score=28.08 Aligned_cols=104 Identities=17% Similarity=0.152 Sum_probs=55.7
Q ss_pred HHHhCCCeEEEeCChHHHHHHHHHHhcCCCC--eEEEeC--CCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhcc
Q 013210 109 AALEGTEAAYCTASGMSAISSVLMQLCSSGG--HVVAAR--TLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQ 184 (447)
Q Consensus 109 a~l~g~~~~~~tsggt~A~~~al~~l~~~gd--~Vi~~~--~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~ 184 (447)
++++.....++|-|-+.....+|+...+.|. +|++.+ |.+.+..- . ..+.+ .|++++.+.-.....+ + .
T Consensus 104 ~~~I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~l-a-~eL~~-~GI~vtlI~Dsa~~~~---m-~ 176 (275)
T PRK08335 104 SELIDDGDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLAL-A-NELEF-LGIEFEVITDAQLGLF---A-K 176 (275)
T ss_pred HHHcCCCCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHH-H-HHHHH-CCCCEEEEeccHHHHH---H-H
Confidence 3444444567776555555555555555554 566655 66655443 3 33333 6999888753333333 3 2
Q ss_pred CCceEEEE--EcCCCCCcccc-C--HHHHHHHHHhcCCEEEE
Q 013210 185 GRTKVLYF--ESISNPTLAVA-N--IPELSRLAHDKGVTVVV 221 (447)
Q Consensus 185 ~~t~lV~i--~~~~NptG~v~-~--l~~I~~la~~~gi~liv 221 (447)
+...|++ +.+. ..|.+. . --.++-+|+.||+.|++
T Consensus 177 -~vd~VivGAD~I~-~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 177 -EATLALVGADNVT-RDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred -hCCEEEECccEEe-cCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 2445554 2222 223332 2 12567778999998876
No 402
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=56.79 E-value=1e+02 Score=29.74 Aligned_cols=104 Identities=21% Similarity=0.203 Sum_probs=55.9
Q ss_pred HHhCCCeEEEeCChHHHHHHHHHHhcCCCC--eEEEeC--CCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccC
Q 013210 110 ALEGTEAAYCTASGMSAISSVLMQLCSSGG--HVVAAR--TLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQG 185 (447)
Q Consensus 110 ~l~g~~~~~~tsggt~A~~~al~~l~~~gd--~Vi~~~--~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~ 185 (447)
+++....+++|-|-+......|....+.|+ +|++.+ |...+ ...... +.+ .|++++.+.-.. +-..+ +
T Consensus 116 ~~i~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G-~~~a~~-L~~-~GI~vtlI~Dsa---v~~~m--~ 187 (310)
T PRK08535 116 KRIRDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQG-HITAKE-LAE-YGIPVTLIVDSA---VRYFM--K 187 (310)
T ss_pred HHcCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhH-HHHHHH-HHH-CCCCEEEEehhH---HHHHH--H
Confidence 333334467776666555555555544443 555544 54555 334433 333 699998875333 33334 2
Q ss_pred CceEEEE--EcCCCCCccccC---HHHHHHHHHhcCCEEEEe
Q 013210 186 RTKVLYF--ESISNPTLAVAN---IPELSRLAHDKGVTVVVD 222 (447)
Q Consensus 186 ~t~lV~i--~~~~NptG~v~~---l~~I~~la~~~gi~livD 222 (447)
++..|++ +.+ -..|.+.. --.++-+|+.++++|++=
T Consensus 188 ~vd~VivGAd~v-~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~ 228 (310)
T PRK08535 188 DVDKVVVGADAI-TANGAVINKIGTSQIALAAHEARVPFMVA 228 (310)
T ss_pred hCCEEEECccEE-ecCCCEEeHHhHHHHHHHHHHhCCCEEEe
Confidence 3555555 222 23444433 236677789999887753
No 403
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=54.39 E-value=1.8e+02 Score=28.02 Aligned_cols=105 Identities=18% Similarity=0.164 Sum_probs=55.4
Q ss_pred hCCCeEEEeCChH--------HHHHHHHHHhcCCCC--eEEEe--CCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHH
Q 013210 112 EGTEAAYCTASGM--------SAISSVLMQLCSSGG--HVVAA--RTLYGGTHALLTHFFPRACNITTTFVDISDHEMVN 179 (447)
Q Consensus 112 ~g~~~~~~tsggt--------~A~~~al~~l~~~gd--~Vi~~--~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 179 (447)
+....+++|-+.+ .....+|+...+.|. +|++. .|.+.+.......+ .+ .|++++++.. ..+-
T Consensus 116 I~~g~~ILT~~~Sg~lat~~~~tv~~~l~~A~~~g~~~~V~v~EsrP~~~G~~~~a~~L-~~-~gI~vtlI~D---sa~~ 190 (303)
T TIGR00524 116 IKDGDTVLTHCNAGALATSDYGTALGVIRSAWEDGKRIRVIACETRPRNQGSRLTAWEL-MQ-DGIDVTLITD---SMAA 190 (303)
T ss_pred ccCCCEEEEecCCccccccCcchHHHHHHHHHHcCCceEEEECCCCCccchHHHHHHHH-HH-CCCCEEEECh---hHHH
Confidence 3333467665544 223334444444443 55554 46666644444333 33 6999988752 2333
Q ss_pred HhhccCCceEEEEE--cCCCCCccccC---HHHHHHHHHhcCCEEEEe
Q 013210 180 SAIVQGRTKVLYFE--SISNPTLAVAN---IPELSRLAHDKGVTVVVD 222 (447)
Q Consensus 180 ~~i~~~~t~lV~i~--~~~NptG~v~~---l~~I~~la~~~gi~livD 222 (447)
..+++.++..|++- .+ ...|.+.. --.++-+|+.++++|++=
T Consensus 191 ~~m~~~~vd~VlvGAd~v-~~nG~v~nk~GT~~lA~~Ak~~~vPv~V~ 237 (303)
T TIGR00524 191 YFMQKGEIDAVIVGADRI-ARNGDVANKIGTYQLAVLAKEFRIPFFVA 237 (303)
T ss_pred HHccccCCCEEEEcccEE-ecCCCEeEhhhHHHHHHHHHHhCCCEEEe
Confidence 44423356666662 22 23343332 236677789999988764
No 404
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=52.73 E-value=66 Score=25.73 Aligned_cols=83 Identities=10% Similarity=0.106 Sum_probs=47.4
Q ss_pred hhcCcccCeeEEEeCCC-CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhc---CCEEEEeCCC-CCCCCC
Q 013210 157 HFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK---GVTVVVDNTF-SPLVLS 231 (447)
Q Consensus 157 ~~~~~~~g~~~~~v~~~-d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~---gi~livD~~~-~~~~~~ 231 (447)
.++.. .|+++.+...+ ..+++.+.+.+.++.+|.++... +-....+.++++.+++. ++.+++=... ...+..
T Consensus 21 ~~l~~-~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~--~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~ 97 (119)
T cd02067 21 RALRD-AGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLL--TTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKF 97 (119)
T ss_pred HHHHH-CCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHH
Confidence 44444 79999886654 66777776656677788775442 22345677887777776 3444443332 110111
Q ss_pred ccCCCCeEEEe
Q 013210 232 PARLGADVVVH 242 (447)
Q Consensus 232 ~~~~g~di~~~ 242 (447)
....|+|.++.
T Consensus 98 ~~~~G~D~~~~ 108 (119)
T cd02067 98 LKEIGVDAYFG 108 (119)
T ss_pred HHHcCCeEEEC
Confidence 22346666654
No 405
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=52.66 E-value=15 Score=38.85 Aligned_cols=37 Identities=16% Similarity=0.159 Sum_probs=32.9
Q ss_pred cCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCC
Q 013210 194 SISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVL 230 (447)
Q Consensus 194 ~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~ 230 (447)
.|++.-|...+++++++-||++||-||+|-|++++.-
T Consensus 205 Ap~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~~ 241 (628)
T COG0296 205 APTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHFPP 241 (628)
T ss_pred cccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCCC
Confidence 5778888888999999999999999999999977654
No 406
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=52.48 E-value=2e+02 Score=26.75 Aligned_cols=120 Identities=13% Similarity=0.160 Sum_probs=70.1
Q ss_pred chHHHHHHHHHHHhCCCeEE--EeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCe--eEEEeCCCC
Q 013210 99 PTVLNLSRQMAALEGTEAAY--CTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNI--TTTFVDISD 174 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~~~~--~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~--~~~~v~~~d 174 (447)
+...++-..+++..++..++ =|..|.+++.++. + +.++.+|++.+..- ......+..+.+ .|. .+..+..+-
T Consensus 65 ~~~g~lL~~l~~~~~ak~iLEiGT~~GySal~la~-a-l~~~g~v~tiE~~~-~~~~~Ar~~~~~-ag~~~~I~~~~G~a 140 (247)
T PLN02589 65 ADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATAL-A-LPEDGKILAMDINR-ENYELGLPVIQK-AGVAHKIDFREGPA 140 (247)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeChhhHHHHHHHh-h-CCCCCEEEEEeCCH-HHHHHHHHHHHH-CCCCCceEEEeccH
Confidence 44456777788888888764 4667777776653 3 34556888887653 333444444433 442 355544444
Q ss_pred HHHHHHhhc----cCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC
Q 013210 175 HEMVNSAIV----QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 175 ~~~l~~~i~----~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~ 225 (447)
.+.|.+... .+.-.+|++..- .......++.+.++.+ .|-++++|++.
T Consensus 141 ~e~L~~l~~~~~~~~~fD~iFiDad--K~~Y~~y~~~~l~ll~-~GGviv~DNvl 192 (247)
T PLN02589 141 LPVLDQMIEDGKYHGTFDFIFVDAD--KDNYINYHKRLIDLVK-VGGVIGYDNTL 192 (247)
T ss_pred HHHHHHHHhccccCCcccEEEecCC--HHHhHHHHHHHHHhcC-CCeEEEEcCCC
Confidence 455555431 135678998653 2333334555555553 47779999996
No 407
>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]
Probab=52.37 E-value=55 Score=35.48 Aligned_cols=70 Identities=19% Similarity=0.231 Sum_probs=47.0
Q ss_pred eCCh-HHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC--C---HHHHHHhhccCCceEEE
Q 013210 120 TASG-MSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--D---HEMVNSAIVQGRTKVLY 191 (447)
Q Consensus 120 tsgg-t~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~--d---~~~l~~~i~~~~t~lV~ 191 (447)
|.|| ||...-++...+..|+.+++--|+-.-+...+..+..+ +|.++..+... + .+.+.++. +++.++|+
T Consensus 226 TGSGKTEvYl~~i~~~L~~GkqvLvLVPEI~Ltpq~~~rf~~r-Fg~~v~vlHS~Ls~~er~~~W~~~~-~G~~~vVI 301 (730)
T COG1198 226 TGSGKTEVYLEAIAKVLAQGKQVLVLVPEIALTPQLLARFKAR-FGAKVAVLHSGLSPGERYRVWRRAR-RGEARVVI 301 (730)
T ss_pred CCCcHHHHHHHHHHHHHHcCCEEEEEeccccchHHHHHHHHHH-hCCChhhhcccCChHHHHHHHHHHh-cCCceEEE
Confidence 4444 78877788778888999999999988888887666665 67665544332 2 34555554 44444443
No 408
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=52.18 E-value=1.5e+02 Score=26.31 Aligned_cols=81 Identities=14% Similarity=0.184 Sum_probs=49.4
Q ss_pred CeEEEeCC--CchhH-HHHHHhhcCcccCeeEEEeCCC-CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHh
Q 013210 139 GHVVAART--LYGGT-HALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD 214 (447)
Q Consensus 139 d~Vi~~~~--~y~~~-~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~ 214 (447)
.+|++..+ +.|.. ...+..++.. .|+++.++..+ .++++.+++.+.++.+|.+...... ....+.++.+..++
T Consensus 83 ~~vl~~~~~gd~H~lG~~~v~~~l~~-~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~--~~~~~~~~i~~lr~ 159 (201)
T cd02070 83 GKVVIGTVEGDIHDIGKNLVATMLEA-NGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTT--TMGGMKEVIEALKE 159 (201)
T ss_pred CeEEEEecCCccchHHHHHHHHHHHH-CCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccc--cHHHHHHHHHHHHH
Confidence 45554432 34433 2333345554 79999887665 6788888876677888877554332 34567787777776
Q ss_pred c----CCEEEEe
Q 013210 215 K----GVTVVVD 222 (447)
Q Consensus 215 ~----gi~livD 222 (447)
. ++.+++=
T Consensus 160 ~~~~~~~~i~vG 171 (201)
T cd02070 160 AGLRDKVKVMVG 171 (201)
T ss_pred CCCCcCCeEEEE
Confidence 5 3455443
No 409
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=52.01 E-value=90 Score=28.04 Aligned_cols=125 Identities=13% Similarity=0.154 Sum_probs=71.7
Q ss_pred chHHHHHHHHHHHhCCCeEEE--eCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCe--eEEEeCCCC
Q 013210 99 PTVLNLSRQMAALEGTEAAYC--TASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNI--TTTFVDISD 174 (447)
Q Consensus 99 ~~~~~l~~~ia~l~g~~~~~~--tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~--~~~~v~~~d 174 (447)
+...++-..++++.++..++= |..|.+++.++- + +.++.+|++.+..-. .....+..+.+ .|. .+..+..+-
T Consensus 31 ~~~g~lL~~l~~~~~~k~vLEIGt~~GySal~la~-~-l~~~g~i~tiE~~~~-~~~~A~~~~~~-ag~~~~I~~~~gda 106 (205)
T PF01596_consen 31 PETGQLLQMLVRLTRPKRVLEIGTFTGYSALWLAE-A-LPEDGKITTIEIDPE-RAEIARENFRK-AGLDDRIEVIEGDA 106 (205)
T ss_dssp HHHHHHHHHHHHHHT-SEEEEESTTTSHHHHHHHH-T-STTTSEEEEEESSHH-HHHHHHHHHHH-TTGGGGEEEEES-H
T ss_pred HHHHHHHHHHHHhcCCceEEEeccccccHHHHHHH-h-hcccceEEEecCcHH-HHHHHHHHHHh-cCCCCcEEEEEecc
Confidence 444566677888888888653 567777777663 3 345568888776533 33444444433 443 455554544
Q ss_pred HHHHHHhhcc---CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC-CCCCC
Q 013210 175 HEMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVL 230 (447)
Q Consensus 175 ~~~l~~~i~~---~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~ 230 (447)
.+.|.+...+ ..-.+|++... ..-....++.+.++.+ .|.++++|++. .+...
T Consensus 107 ~~~l~~l~~~~~~~~fD~VFiDa~--K~~y~~y~~~~~~ll~-~ggvii~DN~l~~G~V~ 163 (205)
T PF01596_consen 107 LEVLPELANDGEEGQFDFVFIDAD--KRNYLEYFEKALPLLR-PGGVIIADNVLWRGSVA 163 (205)
T ss_dssp HHHHHHHHHTTTTTSEEEEEEEST--GGGHHHHHHHHHHHEE-EEEEEEEETTTGGGGGG
T ss_pred HhhHHHHHhccCCCceeEEEEccc--ccchhhHHHHHhhhcc-CCeEEEEccccccceec
Confidence 5555554422 24689999763 2222223555555443 57888999997 44333
No 410
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=51.48 E-value=1.8e+02 Score=27.89 Aligned_cols=103 Identities=19% Similarity=0.207 Sum_probs=59.3
Q ss_pred CCeEEEeCChHHHHHHHHHHhcCCCC--eEEEe--CCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceE
Q 013210 114 TEAAYCTASGMSAISSVLMQLCSSGG--HVVAA--RTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKV 189 (447)
Q Consensus 114 ~~~~~~tsggt~A~~~al~~l~~~gd--~Vi~~--~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~l 189 (447)
..+++.|-|-+.+...++......|+ +|++. .|.+.+.. .+ ..+.+ .|+++..+. |- ++-..+ .+...
T Consensus 119 dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~-~a-k~L~~-~gI~~~~I~--Ds-a~~~~~--~~vd~ 190 (301)
T COG1184 119 DGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRI-MA-KELRQ-SGIPVTVIV--DS-AVGAFM--SRVDK 190 (301)
T ss_pred CCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHH-HH-HHHHH-cCCceEEEe--ch-HHHHHH--HhCCE
Confidence 44589998888888888877777776 55554 46676543 23 34444 688887764 21 222233 23444
Q ss_pred EEEE--cCCCCCccccC---HHHHHHHHHhcCCEEEE-eCCC
Q 013210 190 LYFE--SISNPTLAVAN---IPELSRLAHDKGVTVVV-DNTF 225 (447)
Q Consensus 190 V~i~--~~~NptG~v~~---l~~I~~la~~~gi~liv-D~~~ 225 (447)
|++- .+. ..|.+.. ---|+..||+.++++++ =++|
T Consensus 191 VivGad~I~-~nG~lvnkiGT~~lA~~A~e~~~Pf~v~aesy 231 (301)
T COG1184 191 VLVGADAIL-ANGALVNKIGTSPLALAARELRVPFYVVAESY 231 (301)
T ss_pred EEECcccee-cCCcEEeccchHHHHHHHHHhCCCEEEEeeee
Confidence 4442 111 2233322 23677888999887664 3444
No 411
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=49.91 E-value=2.2e+02 Score=28.66 Aligned_cols=55 Identities=20% Similarity=0.348 Sum_probs=39.3
Q ss_pred EEEeCCCCHHHHHHhhccCCceEEEEEcCC---CCC-----ccccCH----HHHHHHHHhcCCEEEE
Q 013210 167 TTFVDISDHEMVNSAIVQGRTKVLYFESIS---NPT-----LAVANI----PELSRLAHDKGVTVVV 221 (447)
Q Consensus 167 ~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~---Npt-----G~v~~l----~~I~~la~~~gi~liv 221 (447)
+......+++++.+.+++.++.++++.+++ ++. |.+..+ .+|.++||++|+.++.
T Consensus 149 l~l~aEt~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 149 LYLLAETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred eEEehhcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 334445699999998877788898887664 343 555443 3788999999986654
No 412
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=49.67 E-value=1.8e+02 Score=25.87 Aligned_cols=41 Identities=15% Similarity=0.079 Sum_probs=27.1
Q ss_pred HHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEe
Q 013210 177 MVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVD 222 (447)
Q Consensus 177 ~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD 222 (447)
.++... +++--++.+.+ +|.-.++.++++++|++|+.+|.=
T Consensus 102 ql~~~~-~~gDvli~iS~----SG~s~~v~~a~~~Ak~~G~~vI~I 142 (196)
T PRK10886 102 QVRALG-HAGDVLLAIST----RGNSRDIVKAVEAAVTRDMTIVAL 142 (196)
T ss_pred HHHHcC-CCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEEE
Confidence 344444 44334444432 566778899999999999988753
No 413
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=49.02 E-value=64 Score=31.01 Aligned_cols=37 Identities=24% Similarity=0.349 Sum_probs=26.7
Q ss_pred eEEEEEcCCCCCccccC-HHHHHHHHHhcCCEEEEeCCC
Q 013210 188 KVLYFESISNPTLAVAN-IPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 188 ~lV~i~~~~NptG~v~~-l~~I~~la~~~gi~livD~~~ 225 (447)
.+|++ +-+=|-|.-.+ ..+|.++|++.|+.+++|..-
T Consensus 131 d~Vvl-sGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 131 DIVVL-SGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CEEEE-eCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 34444 33445565554 789999999999999999763
No 414
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=48.77 E-value=1.4e+02 Score=24.89 Aligned_cols=56 Identities=7% Similarity=0.088 Sum_probs=38.6
Q ss_pred hhcCcccCeeEEEeCCC-CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhc
Q 013210 157 HFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK 215 (447)
Q Consensus 157 ~~~~~~~g~~~~~v~~~-d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~ 215 (447)
.++.. .|+++.++-.+ .++++.+++.+.++.+|.+...+. .....++++.+.+++.
T Consensus 25 ~~lr~-~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~--~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 25 RALTE-AGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYG--HGEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHH-CCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccc--cCHHHHHHHHHHHHhc
Confidence 34444 79999998765 678888777577888888865543 2344567777777765
No 415
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=48.51 E-value=32 Score=29.78 Aligned_cols=46 Identities=22% Similarity=0.359 Sum_probs=35.7
Q ss_pred CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcC--CEEEEeCCC
Q 013210 174 DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKG--VTVVVDNTF 225 (447)
Q Consensus 174 d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~g--i~livD~~~ 225 (447)
|..++++++ +.+...|++- +|.+..++++.+..+++| +++|+|-+.
T Consensus 12 ~~~~le~~l-es~~~~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~ 59 (181)
T COG1954 12 DNKDLEKAL-ESESQYVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVE 59 (181)
T ss_pred hHHHHHHHh-cCCCeEEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhc
Confidence 778899998 6566666652 578899999999999876 677788664
No 416
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=48.33 E-value=2.7e+02 Score=27.15 Aligned_cols=178 Identities=14% Similarity=0.060 Sum_probs=84.4
Q ss_pred cccccccccccccCCHHHHHHhhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhc
Q 013210 58 VNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGT--EAAYCTASGMSAISSVLMQLC 135 (447)
Q Consensus 58 ~~~pi~~att~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~--~~~~~tsggt~A~~~al~~l~ 135 (447)
...||..|.-.+.-+. +|...+... ...+..-|+. ..++..+.+.+.... ..+.+..|-.+.-.--+..|+
T Consensus 44 ~~iPii~AnMdtv~~~-~mA~~la~~----g~~~~iHk~~--~~e~~~~~v~~~~~~~~~~~~vsvG~~~~d~er~~~L~ 116 (343)
T TIGR01305 44 SGVPIIAANMDTVGTF-EMAAALSQH----SIFTAIHKHY--SVDEWKAFATNSSPDCLQNVAVSSGSSDNDLEKMTSIL 116 (343)
T ss_pred eCCceEecCCCcccCH-HHHHHHHHC----CCeEEEeeCC--CHHHHHHHHHhhcccccceEEEEeccCHHHHHHHHHHH
Confidence 4567777765554443 344444332 1223333322 223333333332211 223333333334334445555
Q ss_pred CC--CCeEEEeCCCchhHHHHH---HhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEE--cCCCCCcccc-----
Q 013210 136 SS--GGHVVAARTLYGGTHALL---THFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFE--SISNPTLAVA----- 203 (447)
Q Consensus 136 ~~--gd~Vi~~~~~y~~~~~~~---~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~--~~~NptG~v~----- 203 (447)
.. +-.+|+.+..|+-....+ +.+-..+.+..+.-=++.+.++.+.++ ......|.+. +-+|-++...
T Consensus 117 ~a~~~~d~iviD~AhGhs~~~i~~ik~ir~~~p~~~viaGNV~T~e~a~~Li-~aGAD~ikVgiGpGSicttR~~~Gvg~ 195 (343)
T TIGR01305 117 EAVPQLKFICLDVANGYSEHFVEFVKLVREAFPEHTIMAGNVVTGEMVEELI-LSGADIVKVGIGPGSVCTTRTKTGVGY 195 (343)
T ss_pred hcCCCCCEEEEECCCCcHHHHHHHHHHHHhhCCCCeEEEecccCHHHHHHHH-HcCCCEEEEcccCCCcccCceeCCCCc
Confidence 44 344555555554333332 222222123343333345888888887 5445555543 3334444332
Q ss_pred -C---HHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeC
Q 013210 204 -N---IPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHS 243 (447)
Q Consensus 204 -~---l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S 243 (447)
. +.++++.++.+++.+|.|.-. ++-....+.+|+|.++..
T Consensus 196 pqltAv~~~a~aa~~~~v~VIaDGGIr~~gDI~KALA~GAd~VMlG 241 (343)
T TIGR01305 196 PQLSAVIECADAAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLG 241 (343)
T ss_pred CHHHHHHHHHHHhccCCCeEEEcCCcCchhHHHHHHHcCCCEEEEC
Confidence 2 445566666779999999643 111123345688888743
No 417
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=47.93 E-value=1.5e+02 Score=25.31 Aligned_cols=87 Identities=18% Similarity=0.184 Sum_probs=51.7
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCC
Q 013210 119 CTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNP 198 (447)
Q Consensus 119 ~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Np 198 (447)
+-++|.-+-.++ ..+++.|-+|.+..-.-..... . .++++...+..|++.+.+++ . +...|+...+.++
T Consensus 4 ~GatG~vG~~l~-~~L~~~~~~V~~~~R~~~~~~~-------~-~~~~~~~~d~~d~~~~~~al-~-~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 4 FGATGFVGRALA-KQLLRRGHEVTALVRSPSKAED-------S-PGVEIIQGDLFDPDSVKAAL-K-GADAVIHAAGPPP 72 (183)
T ss_dssp ETTTSHHHHHHH-HHHHHTTSEEEEEESSGGGHHH-------C-TTEEEEESCTTCHHHHHHHH-T-TSSEEEECCHSTT
T ss_pred ECCCChHHHHHH-HHHHHCCCEEEEEecCchhccc-------c-cccccceeeehhhhhhhhhh-h-hcchhhhhhhhhc
Confidence 334566665544 4556667666654443222211 2 58888888888999999999 4 3445554433222
Q ss_pred CccccCHHHHHHHHHhcCC
Q 013210 199 TLAVANIPELSRLAHDKGV 217 (447)
Q Consensus 199 tG~v~~l~~I~~la~~~gi 217 (447)
. .....+.+.+.|++.|+
T Consensus 73 ~-~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 73 K-DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp T-HHHHHHHHHHHHHHTTS
T ss_pred c-ccccccccccccccccc
Confidence 2 23346677888877654
No 418
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=47.85 E-value=1.9e+02 Score=25.30 Aligned_cols=100 Identities=18% Similarity=0.121 Sum_probs=50.6
Q ss_pred eEEEeC-ChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEc
Q 013210 116 AAYCTA-SGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFES 194 (447)
Q Consensus 116 ~~~~ts-ggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~ 194 (447)
.++++. +|..+-..+ ..+...|.+|++..............+..+ .+..+..++..+.+++.+.+ . +..+|+...
T Consensus 30 ~vlVlGgtG~iG~~~a-~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~-~-~~diVi~at 105 (194)
T cd01078 30 TAVVLGGTGPVGQRAA-VLLAREGARVVLVGRDLERAQKAADSLRAR-FGEGVGAVETSDDAARAAAI-K-GADVVFAAG 105 (194)
T ss_pred EEEEECCCCHHHHHHH-HHHHHCCCEEEEEcCCHHHHHHHHHHHHhh-cCCcEEEeeCCCHHHHHHHH-h-cCCEEEECC
Confidence 455554 466554333 345566777776655433222222222112 35566666677888888877 3 345555433
Q ss_pred CCCCCccccCHHHHHHHHHhcCCEEEEeCCC
Q 013210 195 ISNPTLAVANIPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 195 ~~NptG~v~~l~~I~~la~~~gi~livD~~~ 225 (447)
+ .|...+ .+.+... ....+++|-.+
T Consensus 106 ~---~g~~~~--~~~~~~~-~~~~vv~D~~~ 130 (194)
T cd01078 106 A---AGVELL--EKLAWAP-KPLAVAADVNA 130 (194)
T ss_pred C---CCceec--hhhhccc-CceeEEEEccC
Confidence 3 333211 1111111 22568999877
No 419
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=46.93 E-value=2.4e+02 Score=26.21 Aligned_cols=135 Identities=10% Similarity=0.086 Sum_probs=66.7
Q ss_pred CCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCc
Q 013210 82 GELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPR 161 (447)
Q Consensus 82 ~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~ 161 (447)
+.|.|.+|.|.|--.+...+..|.+. ++-+|. .++.+.--.+.+..+.. . -|-+-+....-.. ..++. ...+
T Consensus 49 g~~kpRts~~sf~G~G~~gl~~L~~~-~~~~Gl-~~~Tev~d~~~v~~~~e-~---vdilqIgs~~~~n-~~LL~-~va~ 120 (250)
T PRK13397 49 GAYKPRTSAASFQGLGLQGIRYLHEV-CQEFGL-LSVSEIMSERQLEEAYD-Y---LDVIQVGARNMQN-FEFLK-TLSH 120 (250)
T ss_pred cccCCCCCCcccCCCCHHHHHHHHHH-HHHcCC-CEEEeeCCHHHHHHHHh-c---CCEEEECcccccC-HHHHH-HHHc
Confidence 44555566666654444334444433 333343 23333333444444433 1 2333333322211 22332 2222
Q ss_pred ccCeeEEEeCC---CCHHHHHHhhc----cCCceEEEEE-c---CCCCCccccCHHHHHHHHHhcCCEEEEeCCCC
Q 013210 162 ACNITTTFVDI---SDHEMVNSAIV----QGRTKVLYFE-S---ISNPTLAVANIPELSRLAHDKGVTVVVDNTFS 226 (447)
Q Consensus 162 ~~g~~~~~v~~---~d~~~l~~~i~----~~~t~lV~i~-~---~~NptG~v~~l~~I~~la~~~gi~livD~~~~ 226 (447)
.|..+. +.. .++++++.+++ ..+..+++++ . -.+++-...++..|..+.+..+..+++|-+|+
T Consensus 121 -tgkPVi-lk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs 194 (250)
T PRK13397 121 -IDKPIL-FKRGLMATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHS 194 (250)
T ss_pred -cCCeEE-EeCCCCCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCC
Confidence 343332 222 26666665542 2455677776 1 12333335688888888887899999999883
No 420
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=46.33 E-value=1.1e+02 Score=29.82 Aligned_cols=130 Identities=16% Similarity=0.229 Sum_probs=77.3
Q ss_pred HHHHHHHHHHhcCCCCeEEEeCC-Cc-hhHHHHHHhhcCcccCeeEEEeC-CCCH-----HHHHHhhccCCceEEEEEcC
Q 013210 124 MSAISSVLMQLCSSGGHVVAART-LY-GGTHALLTHFFPRACNITTTFVD-ISDH-----EMVNSAIVQGRTKVLYFESI 195 (447)
Q Consensus 124 t~A~~~al~~l~~~gd~Vi~~~~-~y-~~~~~~~~~~~~~~~g~~~~~v~-~~d~-----~~l~~~i~~~~t~lV~i~~~ 195 (447)
|..+--...-+.+.|.+|++... +| .+..+.++.+..+ .|+++..-. ..|+ ++++.+. ..+..+|++.+.
T Consensus 153 TTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er-~gv~vI~~~~G~DpAaVafDAi~~Ak-ar~~DvvliDTA 230 (340)
T COG0552 153 TTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGER-LGVPVISGKEGADPAAVAFDAIQAAK-ARGIDVVLIDTA 230 (340)
T ss_pred HhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHH-hCCeEEccCCCCCcHHHHHHHHHHHH-HcCCCEEEEeCc
Confidence 55555555556677887776543 34 3344555556666 788776533 2354 4566666 567889999875
Q ss_pred ---CCCCccccCHHHHHHHHHhcC------CEEEEeCCCCCCCCCc-----cCCCCeEEEeCCCccccCCCCeeEEEEE
Q 013210 196 ---SNPTLAVANIPELSRLAHDKG------VTVVVDNTFSPLVLSP-----ARLGADVVVHSISKFISGGADIIAGAVC 260 (447)
Q Consensus 196 ---~NptG~v~~l~~I~~la~~~g------i~livD~~~~~~~~~~-----~~~g~di~~~S~sK~~g~~g~~igG~l~ 260 (447)
+|-..-+.+|++|.+++++.. ++++.|++.+.-.+.- ...+.|-++ ++|.=|-. -||.++
T Consensus 231 GRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~l~GiI--lTKlDgtA---KGG~il 304 (340)
T COG0552 231 GRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVGLDGII--LTKLDGTA---KGGIIL 304 (340)
T ss_pred ccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcCCceEE--EEecccCC---Ccceee
Confidence 344444456888899888754 7777799863221110 112456555 56765522 246654
No 421
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=45.75 E-value=2e+02 Score=27.62 Aligned_cols=98 Identities=16% Similarity=0.124 Sum_probs=57.1
Q ss_pred eEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcC
Q 013210 116 AAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESI 195 (447)
Q Consensus 116 ~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~ 195 (447)
.+++|.|.---=+.....|++.|-.|++.+....+....+.. .-.+....|..|-+.|.+.+++.++.+|+--..
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~-----~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa 76 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK-----LQFKFYEGDLLDRALLTAVFEENKIDAVVHFAA 76 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh-----ccCceEEeccccHHHHHHHHHhcCCCEEEECcc
Confidence 356666544334445566778888777777666666666521 113555666678888988886556655543222
Q ss_pred CCCCcccc--CH----------HHHHHHHHhcCCE
Q 013210 196 SNPTLAVA--NI----------PELSRLAHDKGVT 218 (447)
Q Consensus 196 ~NptG~v~--~l----------~~I~~la~~~gi~ 218 (447)
.-..|.-. |+ -.|.+.++++|+.
T Consensus 77 ~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~ 111 (329)
T COG1087 77 SISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVK 111 (329)
T ss_pred ccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCC
Confidence 22222221 22 2677788888753
No 422
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=45.50 E-value=84 Score=29.20 Aligned_cols=110 Identities=17% Similarity=0.173 Sum_probs=59.1
Q ss_pred HHHHHHHHHhCC-CeEEEeCChHHHHHHHHHHhcCCCCeEEEeC---CCchh-HHHHHHhhcCcccCeeEEEeCCCCHHH
Q 013210 103 NLSRQMAALEGT-EAAYCTASGMSAISSVLMQLCSSGGHVVAAR---TLYGG-THALLTHFFPRACNITTTFVDISDHEM 177 (447)
Q Consensus 103 ~l~~~ia~l~g~-~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~---~~y~~-~~~~~~~~~~~~~g~~~~~v~~~d~~~ 177 (447)
.+++....+-+. .-++.+|||..+-.++..+.-.-|+.++... |..+. ...-....... .|++..+++.+-++
T Consensus 6 Kl~~l~~~ik~~~kv~vAfSGGvDSslLa~la~~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~-iGi~H~~i~~~~~~- 83 (269)
T COG1606 6 KLERLKKAIKEKKKVVVAFSGGVDSSLLAKLAKEALGDNVVAVTVDSPYIPRREIEEAKNIAKE-IGIRHEFIKMNRMD- 83 (269)
T ss_pred HHHHHHHHHhhcCeEEEEecCCccHHHHHHHHHHHhccceEEEEEecCCCChhhhhHHHHHHHH-hCCcceeeehhhcc-
Confidence 334333333333 3478889999888777766444477665433 22221 22222223333 67777776654222
Q ss_pred HHHhhccCCceEEEEEcCCCCCcccc--CHHHHHHHHHhcCCEEEEeCCC
Q 013210 178 VNSAIVQGRTKVLYFESISNPTLAVA--NIPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 178 l~~~i~~~~t~lV~i~~~~NptG~v~--~l~~I~~la~~~gi~livD~~~ 225 (447)
.. + ..++-|..-.+- =.+.|.+.++++|.-+|+|.+-
T Consensus 84 -~~-~---------~~n~~~rCY~CK~~v~~~l~~~a~~~Gyd~V~dGtN 122 (269)
T COG1606 84 -PE-F---------KENPENRCYLCKRAVYSTLVEEAEKRGYDVVADGTN 122 (269)
T ss_pred -hh-h---------ccCCCCcchHHHHHHHHHHHHHHHHcCCCEEEeCCc
Confidence 11 1 112222211111 2567889999999999999985
No 423
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=43.93 E-value=3.6e+02 Score=27.27 Aligned_cols=89 Identities=11% Similarity=0.135 Sum_probs=49.9
Q ss_pred hcCCCCeEE-EeCCCc-hhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhcc----CCceEEEEEcCCCCCccccCHHH
Q 013210 134 LCSSGGHVV-AARTLY-GGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQ----GRTKVLYFESISNPTLAVANIPE 207 (447)
Q Consensus 134 l~~~gd~Vi-~~~~~y-~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~----~~t~lV~i~~~~NptG~v~~l~~ 207 (447)
+...|.+|. +....| .+....+..+... .|+.+... .+.+++.+++.. .+..+|++.++....-....+++
T Consensus 265 L~~~GkkVglI~aDt~RiaAvEQLk~yae~-lgipv~v~--~d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~kd~~lm~E 341 (436)
T PRK11889 265 FHGKKKTVGFITTDHSRIGTVQQLQDYVKT-IGFEVIAV--RDEAAMTRALTYFKEEARVDYILIDTAGKNYRASETVEE 341 (436)
T ss_pred HHHcCCcEEEEecCCcchHHHHHHHHHhhh-cCCcEEec--CCHHHHHHHHHHHHhccCCCEEEEeCccccCcCHHHHHH
Confidence 445565543 333344 3445555445444 67666543 466777666521 14679999877543322233556
Q ss_pred HHHHHHh---cCCEEEEeCCC
Q 013210 208 LSRLAHD---KGVTVVVDNTF 225 (447)
Q Consensus 208 I~~la~~---~gi~livD~~~ 225 (447)
+.++.+. +.+++++|++.
T Consensus 342 L~~~lk~~~PdevlLVLsATt 362 (436)
T PRK11889 342 MIETMGQVEPDYICLTLSASM 362 (436)
T ss_pred HHHHHhhcCCCeEEEEECCcc
Confidence 6665543 56788899864
No 424
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=43.38 E-value=1.5e+02 Score=29.03 Aligned_cols=116 Identities=9% Similarity=0.101 Sum_probs=61.7
Q ss_pred HHHHHHHHHHhC-----CCeEEEeCChHHHHHHHHHHhcCCCCeE--EEeCCCchhHHH--HHHhhcCcccCeeEEEeCC
Q 013210 102 LNLSRQMAALEG-----TEAAYCTASGMSAISSVLMQLCSSGGHV--VAARTLYGGTHA--LLTHFFPRACNITTTFVDI 172 (447)
Q Consensus 102 ~~l~~~ia~l~g-----~~~~~~tsggt~A~~~al~~l~~~gd~V--i~~~~~y~~~~~--~~~~~~~~~~g~~~~~v~~ 172 (447)
.+|++.+.++-. .+-++-.|||-.+..++......-|..+ ++.++.+..-.. .+...... .|++...+..
T Consensus 43 ~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~-lgvd~~~i~~ 121 (343)
T TIGR03573 43 KELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKK-LGFDLHTITI 121 (343)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHH-cCCCeEEEeC
Confidence 345555555432 2347888999888777633222224333 455555542211 33334443 6877766654
Q ss_pred CCHHHHHHhhccCCceEEEEEcCCCCCccc--cCHHHHHHHHHhcCCEEEEeCCC
Q 013210 173 SDHEMVNSAIVQGRTKVLYFESISNPTLAV--ANIPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 173 ~d~~~l~~~i~~~~t~lV~i~~~~NptG~v--~~l~~I~~la~~~gi~livD~~~ 225 (447)
|.+.+.... ..... ...+|.... .....+.++|+++|+.+|+....
T Consensus 122 -d~~~~~~l~-~~~~~-----~~~~pc~~c~~~~~~~l~~~A~~~gi~~Il~G~~ 169 (343)
T TIGR03573 122 -NPETFRKLQ-RAYFK-----KVGDPEWPQDHAIFASVYQVALKFNIPLIIWGEN 169 (343)
T ss_pred -CHHHHHHHH-HHHHh-----ccCCCchhhhhHHHHHHHHHHHHhCCCEEEeCCC
Confidence 444444333 11111 222332222 13567889999999999988654
No 425
>PRK08329 threonine synthase; Validated
Probab=43.23 E-value=1.2e+02 Score=29.76 Aligned_cols=56 Identities=27% Similarity=0.301 Sum_probs=34.7
Q ss_pred hCCCeEEEeCChHHHHHHHHHHhcCCC--CeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC
Q 013210 112 EGTEAAYCTASGMSAISSVLMQLCSSG--GHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 173 (447)
Q Consensus 112 ~g~~~~~~tsggt~A~~~al~~l~~~g--d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~ 173 (447)
.|.+.++..++|-.+..+|..+-. .| -.|+++...-......+ +.+|.++..++.+
T Consensus 102 ~g~~~vv~aSsGN~g~alA~~aa~-~G~~~~v~vp~~~~~~k~~~~-----~~~GA~v~~v~~~ 159 (347)
T PRK08329 102 EGINEVVIDSSGNAALSLALYSLS-EGIKVHVFVSYNASKEKISLL-----SRLGAELHFVEGD 159 (347)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHH-cCCcEEEEECCCChHHHHHHH-----HHcCCEEEEECCC
Confidence 366778888899888887775532 24 34555544322233332 2379999998765
No 426
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=42.88 E-value=57 Score=29.06 Aligned_cols=35 Identities=26% Similarity=0.469 Sum_probs=28.7
Q ss_pred CceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEE
Q 013210 186 RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 221 (447)
Q Consensus 186 ~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~liv 221 (447)
.+..|++|-. |+.|.....+++.++|++||+.++.
T Consensus 156 ~Pa~VicEi~-~~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 156 KPAGVICEIM-NDDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCcEEEEEEe-CCCccccChHHHHHHHHHcCCcEEE
Confidence 4566666654 5699999999999999999998874
No 427
>PRK06371 translation initiation factor IF-2B subunit alpha; Provisional
Probab=42.71 E-value=2.5e+02 Score=27.35 Aligned_cols=86 Identities=14% Similarity=0.122 Sum_probs=46.1
Q ss_pred HHHhcCCCC--eEEEeC--CCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEE--cCCCCCccccC
Q 013210 131 LMQLCSSGG--HVVAAR--TLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFE--SISNPTLAVAN 204 (447)
Q Consensus 131 l~~l~~~gd--~Vi~~~--~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~--~~~NptG~v~~ 204 (447)
++...+.|. +|++.+ |...+.......+ .+ .|++++.+.-. .+-..+.+.++..|++- .+. ..|.+..
T Consensus 161 l~~A~~~gk~f~V~v~EsRP~~qG~rlta~eL-~~-~GI~vtlI~Ds---a~~~~M~~~~Vd~VivGAd~I~-aNG~v~N 234 (329)
T PRK06371 161 IRIAHRNGKNIFVFVDETRPRLQGARLTAWEL-AQ-EGIDHAIIADN---AAGYFMRKKEIDLVIVGADRIA-SNGDFAN 234 (329)
T ss_pred HHHHHHcCCeeEEEECCCCCcchHHHHHHHHH-HH-CCCCEEEEccc---HHHHHhhhcCCCEEEECccEEe-cCCCEee
Confidence 344444454 666655 6666654323222 23 68998887422 22233423456666662 222 2343332
Q ss_pred ---HHHHHHHHHhcCCEEEEe
Q 013210 205 ---IPELSRLAHDKGVTVVVD 222 (447)
Q Consensus 205 ---l~~I~~la~~~gi~livD 222 (447)
--.++-+||.||++|++=
T Consensus 235 KiGT~~lAl~Ak~~~VPfyV~ 255 (329)
T PRK06371 235 KIGTYEKAVLAKVNGIPFYVA 255 (329)
T ss_pred hhhHHHHHHHHHHcCCCEEEe
Confidence 236777889999988864
No 428
>smart00642 Aamy Alpha-amylase domain.
Probab=42.09 E-value=25 Score=30.47 Aligned_cols=28 Identities=25% Similarity=0.415 Sum_probs=25.0
Q ss_pred CCccccCHHHHHHHHHhcCCEEEEeCCC
Q 013210 198 PTLAVANIPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 198 ptG~v~~l~~I~~la~~~gi~livD~~~ 225 (447)
..|+..+++++++.||++|+.+++|-+.
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 4577788999999999999999999886
No 429
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=41.30 E-value=3.3e+02 Score=26.09 Aligned_cols=103 Identities=19% Similarity=0.210 Sum_probs=59.9
Q ss_pred CeEEEeCChHHHHHHHHHHhcCCCC--eEEEeC--CCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEE
Q 013210 115 EAAYCTASGMSAISSVLMQLCSSGG--HVVAAR--TLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVL 190 (447)
Q Consensus 115 ~~~~~tsggt~A~~~al~~l~~~gd--~Vi~~~--~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV 190 (447)
.++++|.|.+-.+..-|....++|. +|++.+ |.+.+ +....... + .|++.+.++ | .++-+.+ ..-.++|
T Consensus 163 nEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qg-H~~Ak~la-~-~giettVI~--d-aaVfA~M-srVnKVI 235 (353)
T KOG1465|consen 163 NEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQG-HELAKPLA-Q-AGIETTVIP--D-AAVFAMM-SRVNKVI 235 (353)
T ss_pred CceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccc-hHhhHHHH-H-cCCeeEEec--c-HHHHHHh-hhcceEE
Confidence 4689999887777777766666643 455544 44554 45544444 3 588877654 3 3344444 2223444
Q ss_pred EEEcCCCCCccc-cC--HHHHHHHHHhcCCEEEEeCC
Q 013210 191 YFESISNPTLAV-AN--IPELSRLAHDKGVTVVVDNT 224 (447)
Q Consensus 191 ~i~~~~NptG~v-~~--l~~I~~la~~~gi~livD~~ 224 (447)
+-.+.--+.|.+ .+ ...++..|++|-+++++=+-
T Consensus 236 igt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp 272 (353)
T KOG1465|consen 236 IGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAP 272 (353)
T ss_pred EEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecc
Confidence 444333333333 22 56778888889888876554
No 430
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=41.29 E-value=1.5e+02 Score=29.91 Aligned_cols=100 Identities=9% Similarity=0.074 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhcCCCCeEEEeC-CCchh-HHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCcc
Q 013210 124 MSAISSVLMQLCSSGGHVVAAR-TLYGG-THALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLA 201 (447)
Q Consensus 124 t~A~~~al~~l~~~gd~Vi~~~-~~y~~-~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~ 201 (447)
|.+..++.......|.+|.+.. ..|.. ....+..+... .|+.+.. ..++.++.+.+...+..+|++.++..+.-.
T Consensus 238 TtaaKLA~~~~~~~G~~V~Lit~Dt~R~aA~eQLk~yAe~-lgvp~~~--~~~~~~l~~~l~~~~~D~VLIDTaGr~~rd 314 (432)
T PRK12724 238 TSIAKLAAKYFLHMGKSVSLYTTDNYRIAAIEQLKRYADT-MGMPFYP--VKDIKKFKETLARDGSELILIDTAGYSHRN 314 (432)
T ss_pred HHHHHHHHHHHHhcCCeEEEecccchhhhHHHHHHHHHHh-cCCCeee--hHHHHHHHHHHHhCCCCEEEEeCCCCCccC
Confidence 4445555433345566664433 33332 23333333333 4554432 234566666664456788999887655444
Q ss_pred ccCHHHHHHHHHh------cCCEEEEeCCCC
Q 013210 202 VANIPELSRLAHD------KGVTVVVDNTFS 226 (447)
Q Consensus 202 v~~l~~I~~la~~------~gi~livD~~~~ 226 (447)
...++++.++.+. ...++++|.+.+
T Consensus 315 ~~~l~eL~~~~~~~~~~~~~e~~LVLsAt~~ 345 (432)
T PRK12724 315 LEQLERMQSFYSCFGEKDSVENLLVLSSTSS 345 (432)
T ss_pred HHHHHHHHHHHHhhcCCCCCeEEEEEeCCCC
Confidence 4556677666653 357899998863
No 431
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=41.25 E-value=1.5e+02 Score=28.04 Aligned_cols=56 Identities=25% Similarity=0.342 Sum_probs=34.7
Q ss_pred eCCCCHHHHHHhhccCCceEEEEEcCCCCCccc-cC-----------HHHHHHHHHhcCCEEE---EeCCC
Q 013210 170 VDISDHEMVNSAIVQGRTKVLYFESISNPTLAV-AN-----------IPELSRLAHDKGVTVV---VDNTF 225 (447)
Q Consensus 170 v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v-~~-----------l~~I~~la~~~gi~li---vD~~~ 225 (447)
+|..|.+.+.+.++..++.+|+-+....-.-.. .+ ...|+++|++.|+.+| .|-+|
T Consensus 34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVF 104 (281)
T COG1091 34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVF 104 (281)
T ss_pred ccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEe
Confidence 456688888888855556676654433222222 11 3478999999998765 45555
No 432
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=40.27 E-value=1e+02 Score=31.96 Aligned_cols=60 Identities=17% Similarity=0.222 Sum_probs=42.3
Q ss_pred cC-eeEEEeCCC----CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhc--CCEEEEeCCC
Q 013210 163 CN-ITTTFVDIS----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK--GVTVVVDNTF 225 (447)
Q Consensus 163 ~g-~~~~~v~~~----d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~--gi~livD~~~ 225 (447)
.| .++..+|.. +.+++.+.+...++.+|.++.. |.......++++.+++. ++.+|+=..+
T Consensus 35 ~G~~~V~iiD~~~~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h 101 (497)
T TIGR02026 35 AGYHDVTFLDAMTGPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIH 101 (497)
T ss_pred cCCcceEEecccccCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 57 588888754 5677777774556778877532 33445566888888876 8999988776
No 433
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=39.76 E-value=1.2e+02 Score=28.59 Aligned_cols=102 Identities=16% Similarity=0.168 Sum_probs=52.8
Q ss_pred CCCeEEEeCChHHHHHHHHHHhcCCCC--eEEEeC--CCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCce
Q 013210 113 GTEAAYCTASGMSAISSVLMQLCSSGG--HVVAAR--TLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTK 188 (447)
Q Consensus 113 g~~~~~~tsggt~A~~~al~~l~~~gd--~Vi~~~--~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~ 188 (447)
.....+.|-|-+..+..+|....+.|. +|++.+ |.+.+ ...+..+ .. .|+++.+++... +-..+.+ ++.
T Consensus 106 ~~~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG-~~~a~~L-~~-~gi~v~~i~d~~---~~~~m~~-~vd 178 (282)
T PF01008_consen 106 NDGDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEG-RLMAKEL-AE-AGIPVTLIPDSA---VGYVMPR-DVD 178 (282)
T ss_dssp -TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHH-HTHHHHH-HH-TT-EEEEE-GGG---HHHHHHC-TES
T ss_pred cCCeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhh-hhHHHHh-hh-cceeEEEEechH---HHHHHHH-hCC
Confidence 334577777777777777766555553 455443 55555 3344333 33 699999876333 3334422 355
Q ss_pred EEEEE--cCCCCCcccc-C--HHHHHHHHHhcCCEEEEe
Q 013210 189 VLYFE--SISNPTLAVA-N--IPELSRLAHDKGVTVVVD 222 (447)
Q Consensus 189 lV~i~--~~~NptG~v~-~--l~~I~~la~~~gi~livD 222 (447)
.|++- .+. +.|.+. . -..++-+|+++++++++=
T Consensus 179 ~VliGad~v~-~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 179 KVLIGADAVL-ANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp EEEEE-SEEE-TTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred eeEEeeeEEe-cCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 55553 222 334333 2 346777889999887764
No 434
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=39.67 E-value=3.3e+02 Score=25.62 Aligned_cols=69 Identities=14% Similarity=0.235 Sum_probs=39.9
Q ss_pred CCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC---C------CHHHHHHhhccCCceEEEEEcCCCCCccccCHHH
Q 013210 137 SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI---S------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPE 207 (447)
Q Consensus 137 ~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~---~------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~ 207 (447)
++..+++..+.|.-.. +.+|+++..+.. . ++.++.+.++..++++|+++.-.++ +.
T Consensus 170 ~~~~~v~~H~af~Y~~--------~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~ 234 (282)
T cd01017 170 KGKTFVTQHAAFGYLA--------RRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASS-------KI 234 (282)
T ss_pred CCCeEEEecccHHHHH--------HHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HH
Confidence 3567787777655221 125666543211 1 4556666665677888888765443 34
Q ss_pred HHHHHHhcCCEEE
Q 013210 208 LSRLAHDKGVTVV 220 (447)
Q Consensus 208 I~~la~~~gi~li 220 (447)
+..++++.|+.++
T Consensus 235 ~~~la~~~g~~v~ 247 (282)
T cd01017 235 AETLAKETGAKLL 247 (282)
T ss_pred HHHHHHHcCCcEE
Confidence 4456777777553
No 435
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=39.20 E-value=90 Score=24.39 Aligned_cols=49 Identities=14% Similarity=0.198 Sum_probs=31.3
Q ss_pred eEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEE
Q 013210 166 TTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 221 (447)
Q Consensus 166 ~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~liv 221 (447)
....++.+..+.+..++ ....++|+++ |...+-+++.++|+++++.++.
T Consensus 42 ~lvIt~gdR~di~~~a~-~~~i~~iIlt------g~~~~~~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 42 DLVITPGDREDIQLAAI-EAGIACIILT------GGLEPSEEVLELAKELGIPVIS 90 (105)
T ss_dssp EEEEEETT-HHHHHHHC-CTTECEEEEE------TT----HHHHHHHHHHT-EEEE
T ss_pred eEEEEeCCcHHHHHHHH-HhCCCEEEEe------CCCCCCHHHHHHHHHCCCEEEE
Confidence 34444466777777777 5567788774 5566778999999999988774
No 436
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=38.55 E-value=2e+02 Score=22.78 Aligned_cols=80 Identities=23% Similarity=0.207 Sum_probs=46.5
Q ss_pred HhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC----CCHHHHHHhhcc-CCceEEEEEc-CCCCCccccCHH
Q 013210 133 QLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI----SDHEMVNSAIVQ-GRTKVLYFES-ISNPTLAVANIP 206 (447)
Q Consensus 133 ~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~----~d~~~l~~~i~~-~~t~lV~i~~-~~NptG~v~~l~ 206 (447)
.+...|=+|+.+.. +...++ . .|+++..+.. .+ .++.+.+++ .+..+|+... +.+......+-.
T Consensus 20 ~l~~~G~~i~AT~g----Ta~~L~----~-~Gi~~~~v~~~~~~g~-~~i~~~i~~~g~idlVIn~~~~~~~~~~~~dg~ 89 (112)
T cd00532 20 KLSSDGFPLFATGG----TSRVLA----D-AGIPVRAVSKRHEDGE-PTVDAAIAEKGKFDVVINLRDPRRDRCTDEDGT 89 (112)
T ss_pred HHHHCCCEEEECcH----HHHHHH----H-cCCceEEEEecCCCCC-cHHHHHHhCCCCEEEEEEcCCCCcccccCCChH
Confidence 33445666665543 444442 2 4666555422 23 345566656 6777765422 222222345678
Q ss_pred HHHHHHHhcCCEEEEe
Q 013210 207 ELSRLAHDKGVTVVVD 222 (447)
Q Consensus 207 ~I~~la~~~gi~livD 222 (447)
.|.+.|-+++++++.+
T Consensus 90 ~iRR~A~~~~Ip~~T~ 105 (112)
T cd00532 90 ALLRLARLYKIPVTTP 105 (112)
T ss_pred HHHHHHHHcCCCEEEC
Confidence 9999999999999876
No 437
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=37.99 E-value=1.5e+02 Score=21.10 Aligned_cols=59 Identities=7% Similarity=-0.002 Sum_probs=33.4
Q ss_pred hhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEe
Q 013210 157 HFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVD 222 (447)
Q Consensus 157 ~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD 222 (447)
.++.+ .|.++..+... .+.++ ..+..+|++..-.+.+- -.++++|.++.++=|-++++|
T Consensus 12 ~~L~~-~g~~v~~~~~~-~~~l~----~~~~tll~i~~~~~~~~-~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 12 QLLEE-QGVKVERWRKP-YEALE----ADDGTLLVIGPDLRLSE-PEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHH-CCCeeEEeccc-HHHhC----CCCCEEEEEeCCCCCCc-hHHHHHHHHHHHcCCEEEEeC
Confidence 44444 58888776542 44432 23444555533323221 245789999998767777664
No 438
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=37.73 E-value=78 Score=28.22 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=27.7
Q ss_pred CceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEE
Q 013210 186 RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 221 (447)
Q Consensus 186 ~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~liv 221 (447)
.+..|+++-. |+.|...+.+++.++|++||+.++.
T Consensus 152 ~p~avi~eil-~~dG~~~~~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 152 SPVAVICEIL-DDDGDMARRDELEEFAKKHGLPIVS 186 (194)
T ss_dssp -SBEEEEEBB-ETTSSBHCHHHHHHHHHHTT-EEEE
T ss_pred CCcEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 4567777665 5699999999999999999998873
No 439
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=36.91 E-value=4.1e+02 Score=27.44 Aligned_cols=69 Identities=16% Similarity=0.237 Sum_probs=41.6
Q ss_pred CCeEEEeCCCchhHHHHHHhhcCcccCeeEEE-eCC--C------CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHH
Q 013210 138 GGHVVAARTLYGGTHALLTHFFPRACNITTTF-VDI--S------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPEL 208 (447)
Q Consensus 138 gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~-v~~--~------d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I 208 (447)
+..+++..+.|.-... + +|++... +.. . ++.+|.+.+++.++++|+++.-.+. ..+.+
T Consensus 371 ~r~vvt~H~af~YLa~-------~-YGL~~~~~~~~~~~~ePS~~~L~~Li~~IK~~~V~~IF~Epq~~~-----~~~~l 437 (479)
T TIGR03772 371 RRHLITTHDAYSYLGQ-------A-YGLNIAGFVTPNPAVEPSLADRRRLTRTIENLKVPAVFLEPNLAA-----RSTTL 437 (479)
T ss_pred CCEEEEECCcHHHHHH-------H-CCCeEEeeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC-----chHHH
Confidence 4568887776542211 2 5655432 211 1 5666666776678999998765543 23456
Q ss_pred HHHHHhcCCEE
Q 013210 209 SRLAHDKGVTV 219 (447)
Q Consensus 209 ~~la~~~gi~l 219 (447)
..++++.|+.+
T Consensus 438 ~~IA~e~Gv~V 448 (479)
T TIGR03772 438 NEIADELGVRV 448 (479)
T ss_pred HHHHHHcCCcE
Confidence 67788888765
No 440
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=36.47 E-value=1.4e+02 Score=30.29 Aligned_cols=94 Identities=13% Similarity=0.132 Sum_probs=54.0
Q ss_pred CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCc-hhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEE
Q 013210 115 EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLY-GGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFE 193 (447)
Q Consensus 115 ~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y-~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~ 193 (447)
..++++.+|..++ .+...+.+.|-.|.+.+... ......+.. +.. .|+++...+..+ . .. .+..+|+..
T Consensus 6 k~v~iiG~g~~G~-~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~-l~~-~~~~~~~~~~~~--~---~~--~~~d~vv~~ 75 (450)
T PRK14106 6 KKVLVVGAGVSGL-ALAKFLKKLGAKVILTDEKEEDQLKEALEE-LGE-LGIELVLGEYPE--E---FL--EGVDLVVVS 75 (450)
T ss_pred CEEEEECCCHHHH-HHHHHHHHCCCEEEEEeCCchHHHHHHHHH-HHh-cCCEEEeCCcch--h---Hh--hcCCEEEEC
Confidence 4688888888777 45566778898888887753 222222222 222 466654433222 1 12 234556542
Q ss_pred cCCCCCccccCHHHHHHHHHhcCCEEEEeCC
Q 013210 194 SISNPTLAVANIPELSRLAHDKGVTVVVDNT 224 (447)
Q Consensus 194 ~~~NptG~v~~l~~I~~la~~~gi~livD~~ 224 (447)
+|. .+-..+...|+++|+.++.+-.
T Consensus 76 -----~g~-~~~~~~~~~a~~~~i~~~~~~~ 100 (450)
T PRK14106 76 -----PGV-PLDSPPVVQAHKKGIEVIGEVE 100 (450)
T ss_pred -----CCC-CCCCHHHHHHHHCCCcEEeHHH
Confidence 233 2334577788899999887644
No 441
>PRK05638 threonine synthase; Validated
Probab=36.12 E-value=1.5e+02 Score=30.26 Aligned_cols=82 Identities=17% Similarity=0.052 Sum_probs=45.2
Q ss_pred hcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCC--CeEEEeCCCchhHHHHHHh
Q 013210 80 FAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSG--GHVVAARTLYGGTHALLTH 157 (447)
Q Consensus 80 ~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~g--d~Vi~~~~~y~~~~~~~~~ 157 (447)
++.++-||.++|.. |.+...+..+ .-.|.+.++..++|-.+..+|..+- ..| -.|+++...-......+
T Consensus 84 ~K~E~~nPtGSfKd-R~a~~~i~~a-----~~~g~~~vv~aSsGN~g~alA~~aa-~~G~~~~i~vp~~~~~~k~~~~-- 154 (442)
T PRK05638 84 IKDETRNPTGSFRD-RLATVAVSYG-----LPYAANGFIVASDGNAAASVAAYSA-RAGKEAFVVVPRKVDKGKLIQM-- 154 (442)
T ss_pred EEeCCCCCCCChHH-HHHHHHHHHH-----HHcCCCEEEEeCCChHHHHHHHHHH-HcCCCEEEEEeCCCCHHHHHHH--
Confidence 35566677655432 2222211111 1236777888899988888877643 224 35555554322333333
Q ss_pred hcCcccCeeEEEeCCC
Q 013210 158 FFPRACNITTTFVDIS 173 (447)
Q Consensus 158 ~~~~~~g~~~~~v~~~ 173 (447)
+.+|.++..++.+
T Consensus 155 ---~~~GA~vi~v~~~ 167 (442)
T PRK05638 155 ---IAFGAKIIRYGES 167 (442)
T ss_pred ---HhcCcEEEEECCC
Confidence 2379999988754
No 442
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=35.81 E-value=1.6e+02 Score=28.45 Aligned_cols=80 Identities=25% Similarity=0.321 Sum_probs=45.1
Q ss_pred cCCceEEEEEcCCCCCccccCHHHHH----HHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCccccCCCCeeEE
Q 013210 184 QGRTKVLYFESISNPTLAVANIPELS----RLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAG 257 (447)
Q Consensus 184 ~~~t~lV~i~~~~NptG~v~~l~~I~----~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG 257 (447)
+++.+.|.+ -.|+|.|.+..-+.|+ ++.+++-+++.++... +++.. ...+|=++.+-+=..|. | |
T Consensus 95 ~~~vk~vvL-~inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AASGGY~I---A~aAd~I~a~p~si~GS----I-G 165 (317)
T COG0616 95 DPSVKAVVL-RINSPGGSVVASELIARALKRLRAKKPVVVSVGGYAASGGYYI---ALAADKIVADPSSITGS----I-G 165 (317)
T ss_pred CCCCceEEE-EEECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeecchhhhh---hccCCEEEecCCceeee----c-e
Confidence 455665554 3577888887655444 4444444777777664 33322 23456666555555553 4 6
Q ss_pred EEEcChHHHHHHHHH
Q 013210 258 AVCGPANLVNSMMDL 272 (447)
Q Consensus 258 ~l~~~~~~~~~l~~~ 272 (447)
++...+.+.+.+.+.
T Consensus 166 Vi~~~~~~~~l~~k~ 180 (317)
T COG0616 166 VISGAPNFEELLEKL 180 (317)
T ss_pred eEEecCCHHHHHHhc
Confidence 666666666555543
No 443
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=35.77 E-value=1.2e+02 Score=25.15 Aligned_cols=61 Identities=13% Similarity=0.244 Sum_probs=42.2
Q ss_pred HHHhhcCcccCeeEEEeCCC-CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCC
Q 013210 154 LLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGV 217 (447)
Q Consensus 154 ~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi 217 (447)
.+...+.. .|+++.....+ .++++.++..+.+..+|.+++-+ +.....++++.+.+++.|.
T Consensus 20 iv~~~l~~-~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~--~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 20 ILDHAFTN-AGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLY--GHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred HHHHHHHH-CCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--ccCHHHHHHHHHHHHHCCC
Confidence 33344444 79999987766 67777766657788888886654 3344468888888888764
No 444
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=35.59 E-value=85 Score=26.35 Aligned_cols=49 Identities=16% Similarity=0.298 Sum_probs=37.4
Q ss_pred HHHHHhhccCCce-EEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCC
Q 013210 176 EMVNSAIVQGRTK-VLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNT 224 (447)
Q Consensus 176 ~~l~~~i~~~~t~-lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~ 224 (447)
.++-+.+...+.. +|++--|-++...-.|++.|.++|.-||+++-+.-+
T Consensus 63 qQIga~Ia~g~id~vIFf~DPl~~~phepDi~aLlRlc~v~nIP~AtN~a 112 (143)
T TIGR00160 63 QQIGALIAEGKIDAVIFFWDPLNAQPHEPDVKALLRLCTVWNIPLATNVA 112 (143)
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCCCCcCHHHHHHHHHhhCcccccCHH
Confidence 4555555455654 566788888888889999999999999998766543
No 445
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=35.58 E-value=1.2e+02 Score=25.19 Aligned_cols=53 Identities=17% Similarity=0.163 Sum_probs=38.5
Q ss_pred CCHHHHHHhhccCCceEEEEEcCCCCCccccCH----HHHH-HHHHhc-CCEEE-EeCCC
Q 013210 173 SDHEMVNSAIVQGRTKVLYFESISNPTLAVANI----PELS-RLAHDK-GVTVV-VDNTF 225 (447)
Q Consensus 173 ~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l----~~I~-~la~~~-gi~li-vD~~~ 225 (447)
.+.+.|.+.++..++..+++-.|-|..|...+. .+.+ ++.++. ++.++ +||-+
T Consensus 38 ~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~ 97 (135)
T PF03652_consen 38 KDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERL 97 (135)
T ss_dssp CCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSC
T ss_pred hHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCCh
Confidence 488999998877789999999999999988762 2333 333344 77655 89987
No 446
>PRK06450 threonine synthase; Validated
Probab=35.56 E-value=1.9e+02 Score=28.29 Aligned_cols=107 Identities=15% Similarity=0.111 Sum_probs=58.2
Q ss_pred hhcCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHh-cCCCCeEEEeCCCchhHHHHHHh
Q 013210 79 MFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTH 157 (447)
Q Consensus 79 ~~~~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~ 157 (447)
+++.++.||.++|.- |.+.-.+..+++ .|...++..|+|-.+...+..+- ..-.-.|+++...=..-...+
T Consensus 68 ~~K~E~~nPTGSfKD-Rga~~~i~~a~~-----~g~~~vv~aSsGN~g~slA~~aa~~G~~~~i~vP~~~~~~k~~~i-- 139 (338)
T PRK06450 68 WFKLDFLNPTGSYKD-RGSVTLISYLAE-----KGIKQISEDSSGNAGASIAAYGAAAGIEVKIFVPETASGGKLKQI-- 139 (338)
T ss_pred EEEecCCCCcCCCHH-HHHHHHHHHHHH-----cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHH--
Confidence 346667788765532 222222222222 36677888899988888776543 222235556554333333333
Q ss_pred hcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCC
Q 013210 158 FFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPT 199 (447)
Q Consensus 158 ~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Npt 199 (447)
.. +|.++..++. +.++..++. +. ...+++.+..||.
T Consensus 140 --~~-~GA~vi~v~~-~~~~~~~~a-~~-~g~~~~~~~~np~ 175 (338)
T PRK06450 140 --ES-YGAEVVRVRG-SREDVAKAA-EN-SGYYYASHVLQPQ 175 (338)
T ss_pred --HH-cCCEEEEECC-CHHHHHHHH-Hh-cCeEeccCCCCcc
Confidence 23 7999988875 455554443 22 2346665556663
No 447
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=35.35 E-value=74 Score=31.66 Aligned_cols=37 Identities=22% Similarity=0.361 Sum_probs=29.9
Q ss_pred CCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeC
Q 013210 185 GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDN 223 (447)
Q Consensus 185 ~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~ 223 (447)
.+..+|++.- .--|.+.+.+.++++|++.|+++.+|-
T Consensus 142 ~~~~~vVLSD--Y~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 142 KSFDALVLSD--YAKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred hcCCEEEEec--cccccchhHHHHHHHHHHcCCcEEECC
Confidence 3566776643 346888899999999999999999994
No 448
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=35.20 E-value=3.3e+02 Score=24.35 Aligned_cols=93 Identities=16% Similarity=0.193 Sum_probs=53.9
Q ss_pred CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-CHHHHHHhhccCCceEEEEE
Q 013210 115 EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFE 193 (447)
Q Consensus 115 ~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~~~t~lV~i~ 193 (447)
..+++..||..|...+ +.|+..|-+|.+.+|....-...+ .. .| .+.++... ..++ + . ...+|++
T Consensus 10 k~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~~~l~~l---~~--~~-~i~~~~~~~~~~d----l-~-~~~lVi~- 75 (205)
T TIGR01470 10 RAVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELESELTLL---AE--QG-GITWLARCFDADI----L-E-GAFLVIA- 75 (205)
T ss_pred CeEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCCHHHHHH---HH--cC-CEEEEeCCCCHHH----h-C-CcEEEEE-
Confidence 4689999999887665 466777877777777655333222 11 23 34443322 2222 3 1 2345443
Q ss_pred cCCCCCccccCHHHHHHHHHhcCCEEE-EeCCC
Q 013210 194 SISNPTLAVANIPELSRLAHDKGVTVV-VDNTF 225 (447)
Q Consensus 194 ~~~NptG~v~~l~~I~~la~~~gi~li-vD~~~ 225 (447)
.++++ ..-+.|.+.|++.++++- +|+..
T Consensus 76 at~d~----~ln~~i~~~a~~~~ilvn~~d~~e 104 (205)
T TIGR01470 76 ATDDE----ELNRRVAHAARARGVPVNVVDDPE 104 (205)
T ss_pred CCCCH----HHHHHHHHHHHHcCCEEEECCCcc
Confidence 33332 123588999999998873 66654
No 449
>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=34.99 E-value=3.6e+02 Score=24.75 Aligned_cols=120 Identities=19% Similarity=0.215 Sum_probs=74.0
Q ss_pred CchHHHHHHHHHHHhCCCeEE--EeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccC--eeEEEeCCC
Q 013210 98 NPTVLNLSRQMAALEGTEAAY--CTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACN--ITTTFVDIS 173 (447)
Q Consensus 98 ~~~~~~l~~~ia~l~g~~~~~--~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g--~~~~~v~~~ 173 (447)
.+..-.+-..+.+++++..++ =+=+|.+|+..|+. +.++.+|++.+....++.... .+... .| -++.++...
T Consensus 58 ~~d~g~fl~~li~~~~ak~~lelGvfTGySaL~~Ala--lp~dGrv~a~eid~~~~~~~~-~~~k~-agv~~KI~~i~g~ 133 (237)
T KOG1663|consen 58 GPDKGQFLQMLIRLLNAKRTLELGVFTGYSALAVALA--LPEDGRVVAIEIDADAYEIGL-ELVKL-AGVDHKITFIEGP 133 (237)
T ss_pred ChHHHHHHHHHHHHhCCceEEEEecccCHHHHHHHHh--cCCCceEEEEecChHHHHHhH-HHHHh-ccccceeeeeecc
Confidence 344556777788888887743 23357777777663 556778888887665544332 22222 34 356666666
Q ss_pred CHHHHHHhhcc--C-CceEEEEEcC-CCCCccccCHHHHHHHHHhcCCEEEEeCCC
Q 013210 174 DHEMVNSAIVQ--G-RTKVLYFESI-SNPTLAVANIPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 174 d~~~l~~~i~~--~-~t~lV~i~~~-~NptG~v~~l~~I~~la~~~gi~livD~~~ 225 (447)
..+.|.+.+++ . .-..+++.+- .|- ....+++.++.+ .|-++++|++-
T Consensus 134 a~esLd~l~~~~~~~tfDfaFvDadK~nY---~~y~e~~l~Llr-~GGvi~~DNvl 185 (237)
T KOG1663|consen 134 ALESLDELLADGESGTFDFAFVDADKDNY---SNYYERLLRLLR-VGGVIVVDNVL 185 (237)
T ss_pred hhhhHHHHHhcCCCCceeEEEEccchHHH---HHHHHHHHhhcc-cccEEEEeccc
Confidence 77777777743 2 2367777542 111 134667777775 68888999975
No 450
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=34.91 E-value=93 Score=28.45 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=28.1
Q ss_pred CceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEE
Q 013210 186 RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVV 220 (447)
Q Consensus 186 ~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~li 220 (447)
....|+++- -|+.|.....+++.++|++||+.++
T Consensus 172 ~P~~vicEi-l~~dG~ma~~~~l~~fA~~~~l~ii 205 (230)
T PRK00014 172 RPAGVLCEL-MNADGTMMRGASLERYAAKEGLVAL 205 (230)
T ss_pred CceEEEEEE-eCCCCCccCHHHHHHHHHHcCCcEE
Confidence 356666666 5678999999999999999999886
No 451
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=34.61 E-value=3.7e+02 Score=24.77 Aligned_cols=95 Identities=14% Similarity=0.142 Sum_probs=58.9
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC---C--------CCHHHHHHhhc---cCC
Q 013210 121 ASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD---I--------SDHEMVNSAIV---QGR 186 (447)
Q Consensus 121 sggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~---~--------~d~~~l~~~i~---~~~ 186 (447)
.+...|+..+++.+ .-++|-+..|.-......+..++.. .|+++.-.. . .+++.+.++++ .++
T Consensus 105 tt~~~A~~~AL~al--g~~RIalvTPY~~~v~~~~~~~l~~-~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~~~ 181 (239)
T TIGR02990 105 VTPSSAAVDGLAAL--GVRRISLLTPYTPETSRPMAQYFAV-RGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFDPD 181 (239)
T ss_pred eCHHHHHHHHHHHc--CCCEEEEECCCcHHHHHHHHHHHHh-CCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcCCC
Confidence 34566777777776 2257888888666666666677765 788876542 1 16777776663 456
Q ss_pred ceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeC
Q 013210 187 TKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDN 223 (447)
Q Consensus 187 t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~ 223 (447)
..+|++...|=+ -++-|.++=++.|.+++.=+
T Consensus 182 aDAifisCTnLr-----t~~vi~~lE~~lGkPVlsSN 213 (239)
T TIGR02990 182 ADALFLSCTALR-----AATCAQRIEQAIGKPVVTSN 213 (239)
T ss_pred CCEEEEeCCCch-----hHHHHHHHHHHHCCCEEEHH
Confidence 778887533322 24445555566788875443
No 452
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=34.57 E-value=2.8e+02 Score=27.90 Aligned_cols=95 Identities=13% Similarity=0.128 Sum_probs=50.7
Q ss_pred EEEeCChHHHHHHHHHHhc---------CCCCeEEEeCCCchhHH-H---HHHh-hcCcccCeeEEE-eCC---CCHHHH
Q 013210 117 AYCTASGMSAISSVLMQLC---------SSGGHVVAARTLYGGTH-A---LLTH-FFPRACNITTTF-VDI---SDHEMV 178 (447)
Q Consensus 117 ~~~tsggt~A~~~al~~l~---------~~gd~Vi~~~~~y~~~~-~---~~~~-~~~~~~g~~~~~-v~~---~d~~~l 178 (447)
++++.|+..-....+.-+. +++|.|+.+.+..++.. . .+.. .+.+ .|+++.. +.. .+.++|
T Consensus 289 vii~tg~~g~~~~~l~~~~~~~~~~i~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~-~~~~~~~~~h~SgHa~~~dl 367 (422)
T TIGR00649 289 LIITTGSQGEPYAALTRIANNEHEQIRIRKGDTVVFSAPPIPGNENIAVSILLDIRLNE-VGARVIKRIHVSGHASQEDH 367 (422)
T ss_pred EEEEeCCCCcHHHHHHHHhCCCCCcEEeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHh-cCCEEEeceEecCCCCHHHH
Confidence 5555554433344443332 36788999988887765 1 1112 3333 5666533 222 155666
Q ss_pred HHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCC
Q 013210 179 NSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGV 217 (447)
Q Consensus 179 ~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi 217 (447)
...++.-+++.++- + .|....+.+.++++++.|+
T Consensus 368 ~~~i~~~~Pk~~ip--v---Hge~~~~~~~~~~a~~~g~ 401 (422)
T TIGR00649 368 KLLLRLLKPKYIIP--V---HGEYRMLINHTKLAEEEGY 401 (422)
T ss_pred HHHHHHhCCCEEEe--c---CCcHHHHHHHHHHHHHcCC
Confidence 65552224554442 2 2555567777888887775
No 453
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=34.36 E-value=1.8e+02 Score=28.23 Aligned_cols=68 Identities=18% Similarity=0.159 Sum_probs=41.4
Q ss_pred CeEEEeCCh-HHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHH---hhcCcccCeeEEEeCCCCHHHHHHhhc
Q 013210 115 EAAYCTASG-MSAISSVLMQLCSSGGHVVAARTLYGGTHALLT---HFFPRACNITTTFVDISDHEMVNSAIV 183 (447)
Q Consensus 115 ~~~~~tsgg-t~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~---~~~~~~~g~~~~~v~~~d~~~l~~~i~ 183 (447)
..+++|.+. --+-..++ .|++.|+.|++.+..-.++..++. .......++.+..+|..|.+.|++.++
T Consensus 3 ~~VLVtGgaGyiGsht~l-~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~ 74 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVL-ALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFS 74 (343)
T ss_pred cEEEEecCCcceehHHHH-HHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHh
Confidence 346666543 22333333 567889888877765555555553 222222356777777779999999873
No 454
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=33.98 E-value=1e+02 Score=27.63 Aligned_cols=34 Identities=21% Similarity=0.306 Sum_probs=28.2
Q ss_pred CceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEE
Q 013210 186 RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVV 220 (447)
Q Consensus 186 ~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~li 220 (447)
.+..|+++-. |..|.....+++.++|++||+.++
T Consensus 157 ~p~~vicEil-~~dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 157 KPAGVICEMM-NDDGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred CceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcEE
Confidence 3566776664 568999999999999999999886
No 455
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=33.62 E-value=3.6e+02 Score=24.31 Aligned_cols=92 Identities=13% Similarity=0.200 Sum_probs=53.1
Q ss_pred CeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC-CCCHHHHHHhhccCCceEEEEE
Q 013210 115 EAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD-ISDHEMVNSAIVQGRTKVLYFE 193 (447)
Q Consensus 115 ~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~i~~~~t~lV~i~ 193 (447)
..+++..||..|..-+ ..+++.|.+|.+..++...-...+ ... .+ +.+++ ..+.+.+ . +..+|++.
T Consensus 13 k~VlvvGgG~va~rKa-~~ll~~ga~v~Vvs~~~~~el~~~---~~~-~~--i~~~~~~~~~~~~-----~-~~~lviaA 79 (210)
T COG1648 13 KKVLVVGGGSVALRKA-RLLLKAGADVTVVSPEFEPELKAL---IEE-GK--IKWIEREFDAEDL-----D-DAFLVIAA 79 (210)
T ss_pred CEEEEECCCHHHHHHH-HHHHhcCCEEEEEcCCccHHHHHH---HHh-cC--cchhhcccChhhh-----c-CceEEEEe
Confidence 4689999999988765 457788999998888873332222 222 22 22222 1133322 1 23344443
Q ss_pred cCCCCCccccCHHHHHHHHHhcCCEEE-EeCC
Q 013210 194 SISNPTLAVANIPELSRLAHDKGVTVV-VDNT 224 (447)
Q Consensus 194 ~~~NptG~v~~l~~I~~la~~~gi~li-vD~~ 224 (447)
+ +|+ .-=++|.+.|+++++++- +|..
T Consensus 80 t-~d~----~ln~~i~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 80 T-DDE----ELNERIAKAARERRILVNVVDDP 106 (210)
T ss_pred C-CCH----HHHHHHHHHHHHhCCceeccCCc
Confidence 3 222 123589999999987653 5554
No 456
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=33.60 E-value=3e+02 Score=26.35 Aligned_cols=97 Identities=15% Similarity=0.186 Sum_probs=56.0
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccC-eeEEEeCCCCHHHHHHhhccCCceEEEEEcC
Q 013210 117 AYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACN-ITTTFVDISDHEMVNSAIVQGRTKVLYFESI 195 (447)
Q Consensus 117 ~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g-~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~ 195 (447)
.+|..+|--+...+ ..+.+.|..||++--.-.....-+ +.+.. +| +-.-.++..|.+.++++++..+ .+|-+..-
T Consensus 65 TVFGAtGFlGryvv-nklak~GSQviiPyR~d~~~~r~l-kvmGd-LGQvl~~~fd~~DedSIr~vvk~sN-VVINLIGr 140 (391)
T KOG2865|consen 65 TVFGATGFLGRYVV-NKLAKMGSQVIIPYRGDEYDPRHL-KVMGD-LGQVLFMKFDLRDEDSIRAVVKHSN-VVINLIGR 140 (391)
T ss_pred EEecccccccHHHH-HHHhhcCCeEEEeccCCccchhhe-eeccc-ccceeeeccCCCCHHHHHHHHHhCc-EEEEeecc
Confidence 46667777666554 346677999999864322222222 11222 23 2233345559999999984333 33333333
Q ss_pred CCCCcccc--C-----HHHHHHHHHhcCC
Q 013210 196 SNPTLAVA--N-----IPELSRLAHDKGV 217 (447)
Q Consensus 196 ~NptG~v~--~-----l~~I~~la~~~gi 217 (447)
--||+... | -++|+++|++-|+
T Consensus 141 d~eTknf~f~Dvn~~~aerlAricke~GV 169 (391)
T KOG2865|consen 141 DYETKNFSFEDVNVHIAERLARICKEAGV 169 (391)
T ss_pred ccccCCcccccccchHHHHHHHHHHhhCh
Confidence 44555442 2 5699999999886
No 457
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=33.33 E-value=3.2e+02 Score=24.90 Aligned_cols=119 Identities=19% Similarity=0.271 Sum_probs=70.2
Q ss_pred eEEEeCChHHHHHHHHHHhcCCCCeEE---EeC---C---Cch-hHHHHHHhhcCcccCeeEEEeCCC-----CHHHHHH
Q 013210 116 AAYCTASGMSAISSVLMQLCSSGGHVV---AAR---T---LYG-GTHALLTHFFPRACNITTTFVDIS-----DHEMVNS 180 (447)
Q Consensus 116 ~~~~tsggt~A~~~al~~l~~~gd~Vi---~~~---~---~y~-~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~ 180 (447)
-+.+.|||-.++.++..++ +.|..|. +.. + -|| ...... ....+..|+++...+.. ..++|.+
T Consensus 3 ~~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~-~~~Ae~~gi~l~~~~~~g~~e~eve~L~~ 80 (223)
T COG2102 3 VIALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELA-ELQAEAMGIPLVTFDTSGEEEREVEELKE 80 (223)
T ss_pred EEEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHH-HHHHHhcCCceEEEecCccchhhHHHHHH
Confidence 4678899999987777654 4454332 211 1 111 222333 23333478887776654 4677777
Q ss_pred hhccCCceEEEEEcCCCCCcccc---CHHHHHHHHHhcCCEEEEeCCCCCCCC-Cc-------cCCCCeEEEeCCCccc
Q 013210 181 AIVQGRTKVLYFESISNPTLAVA---NIPELSRLAHDKGVTVVVDNTFSPLVL-SP-------ARLGADVVVHSISKFI 248 (447)
Q Consensus 181 ~i~~~~t~lV~i~~~~NptG~v~---~l~~I~~la~~~gi~livD~~~~~~~~-~~-------~~~g~di~~~S~sK~~ 248 (447)
++.+-+...|+ +|.|. ....+-.+|++.|+..+ .++.. ++ ...|.++++.+-+|..
T Consensus 81 ~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~-----~PLWg~d~~ell~e~~~~Gf~~~Iv~Vsa~g 147 (223)
T COG2102 81 ALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVY-----APLWGRDPEELLEEMVEAGFEAIIVAVSAEG 147 (223)
T ss_pred HHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe-----ecccCCCHHHHHHHHHHcCCeEEEEEEeccC
Confidence 77433444555 46665 46788999999998754 34432 22 2347777777666643
No 458
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=33.15 E-value=2.5e+02 Score=25.01 Aligned_cols=42 Identities=17% Similarity=0.100 Sum_probs=27.6
Q ss_pred CCHHHHHH---hhccCCceEEEEEcCCCCCccc-cCHHHHHHHHHh
Q 013210 173 SDHEMVNS---AIVQGRTKVLYFESISNPTLAV-ANIPELSRLAHD 214 (447)
Q Consensus 173 ~d~~~l~~---~i~~~~t~lV~i~~~~NptG~v-~~l~~I~~la~~ 214 (447)
.|++...+ ++....+.+|+-....|+||.- .|-..+.++|.+
T Consensus 120 tdp~~~~ki~e~lp~r~VdvVlSDMapnaTGvr~~Dh~~~i~LC~s 165 (232)
T KOG4589|consen 120 TDPETYRKIFEALPNRPVDVVLSDMAPNATGVRIRDHYRSIELCDS 165 (232)
T ss_pred CCHHHHHHHHHhCCCCcccEEEeccCCCCcCcchhhHHHHHHHHHH
Confidence 36654443 3422345566666677999976 488899999975
No 459
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=32.89 E-value=75 Score=28.74 Aligned_cols=93 Identities=16% Similarity=0.199 Sum_probs=53.7
Q ss_pred HHHHHHhhccCCceEEEEEcCCCCCccc-cCHHHHHHHHHhcCCEEEEeCCC---CCCCCCccCCCC-eEEEeCCCcccc
Q 013210 175 HEMVNSAIVQGRTKVLYFESISNPTLAV-ANIPELSRLAHDKGVTVVVDNTF---SPLVLSPARLGA-DVVVHSISKFIS 249 (447)
Q Consensus 175 ~~~l~~~i~~~~t~lV~i~~~~NptG~v-~~l~~I~~la~~~gi~livD~~~---~~~~~~~~~~g~-di~~~S~sK~~g 249 (447)
++.+++++ +....+|-+=--+..+-.. .-.+++.++|++|++.|++++=. .....+...+|- |+-+.-.-|.++
T Consensus 24 ~~~ve~al-~~Gv~~vQlR~K~~~~~~~~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdGVHlGq~D~~~~~ar~~~~ 102 (211)
T COG0352 24 LEWVEAAL-KGGVTAVQLREKDLSDEEYLALAEKLRALCQKYGVPLIINDRVDLALAVGADGVHLGQDDMPLAEARELLG 102 (211)
T ss_pred HHHHHHHH-hCCCeEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCEEEcCCcccchHHHHHhcC
Confidence 78889988 6666666664433333332 33568999999999999988643 112222233332 344444556666
Q ss_pred CCCCeeEEEEEcChHHHHHHH
Q 013210 250 GGADIIAGAVCGPANLVNSMM 270 (447)
Q Consensus 250 ~~g~~igG~l~~~~~~~~~l~ 270 (447)
++..+ |+=+.+.+-.....
T Consensus 103 -~~~iI-G~S~h~~eea~~A~ 121 (211)
T COG0352 103 -PGLII-GLSTHDLEEALEAE 121 (211)
T ss_pred -CCCEE-EeecCCHHHHHHHH
Confidence 45556 65555544443333
No 460
>KOG1805 consensus DNA replication helicase [Replication, recombination and repair]
Probab=32.75 E-value=3.7e+02 Score=30.16 Aligned_cols=113 Identities=14% Similarity=0.158 Sum_probs=67.2
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCC-------------------CCHHHHHHh
Q 013210 121 ASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI-------------------SDHEMVNSA 181 (447)
Q Consensus 121 sggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~-------------------~d~~~l~~~ 181 (447)
.|=|.-+..+++.|...|++|++...+|.++-+.+.++.+ .++.+-.+-. .+++++++.
T Consensus 696 TGKTTtI~~LIkiL~~~gkkVLLtsyThsAVDNILiKL~~--~~i~~lRLG~~~kih~~v~e~~~~~~~s~ks~~~l~~~ 773 (1100)
T KOG1805|consen 696 TGKTTTISLLIKILVALGKKVLLTSYTHSAVDNILIKLKG--FGIYILRLGSEEKIHPDVEEFTLTNETSEKSYADLKKF 773 (1100)
T ss_pred CCchhhHHHHHHHHHHcCCeEEEEehhhHHHHHHHHHHhc--cCcceeecCCccccchHHHHHhcccccchhhHHHHHHH
Confidence 3447788888898888899999999999988888755432 2333221110 156667777
Q ss_pred hccCCceEEEE--EcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC---CCCCCCccCCCCeEEEeCCCccc
Q 013210 182 IVQGRTKVLYF--ESISNPTLAVANIPELSRLAHDKGVTVVVDNTF---SPLVLSPARLGADVVVHSISKFI 248 (447)
Q Consensus 182 i~~~~t~lV~i--~~~~NptG~v~~l~~I~~la~~~gi~livD~~~---~~~~~~~~~~g~di~~~S~sK~~ 248 (447)
+. ++.+|.. -.++.|.- .+++==+.|+||+- -++...|+.+..-+|+..=|+=+
T Consensus 774 ~~--~~~IVa~TClgi~~plf-----------~~R~FD~cIiDEASQI~lP~~LgPL~~s~kFVLVGDh~QL 832 (1100)
T KOG1805|consen 774 LD--QTSIVACTCLGINHPLF-----------VNRQFDYCIIDEASQILLPLCLGPLSFSNKFVLVGDHYQL 832 (1100)
T ss_pred hC--CCcEEEEEccCCCchhh-----------hccccCEEEEccccccccchhhhhhhhcceEEEecccccC
Confidence 72 3444443 23343321 12221267889884 34445666666666665555444
No 461
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=32.72 E-value=1.1e+02 Score=27.82 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=28.0
Q ss_pred CceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEE
Q 013210 186 RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVV 220 (447)
Q Consensus 186 ~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~li 220 (447)
.+..|+++-. |+.|.....+++.++|++||+.++
T Consensus 168 ~p~~vicEil-~~dG~ma~~~~l~~fA~~h~l~~i 201 (218)
T PRK00910 168 QPAGVLCELT-NPDGTMAKTPEIIAFGKLHNMPVL 201 (218)
T ss_pred CceEEEEEEe-cCCCCcCCHHHHHHHHHHcCCcEE
Confidence 3566776664 567999999999999999999886
No 462
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=32.64 E-value=1.6e+02 Score=24.34 Aligned_cols=58 Identities=12% Similarity=0.197 Sum_probs=39.7
Q ss_pred hhcCcccCeeEEEeCCC-CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCC
Q 013210 157 HFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGV 217 (447)
Q Consensus 157 ~~~~~~~g~~~~~v~~~-d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi 217 (447)
..+.. .|+++...-.+ .++.+.++..+.+..+|.+++.+ +.....++++.+.+++.|+
T Consensus 21 ~~L~~-~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~--t~~~~~~~~~~~~l~~~gl 79 (128)
T cd02072 21 HAFTE-AGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLY--GHGEIDCKGLREKCDEAGL 79 (128)
T ss_pred HHHHH-CCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cCCHHHHHHHHHHHHHCCC
Confidence 34444 79999887765 66776665546778888876544 3345567888888888754
No 463
>PLN02379 pfkB-type carbohydrate kinase family protein
Probab=32.33 E-value=3.3e+02 Score=26.84 Aligned_cols=36 Identities=25% Similarity=0.235 Sum_probs=22.4
Q ss_pred CceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCC
Q 013210 186 RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNT 224 (447)
Q Consensus 186 ~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~ 224 (447)
+.++++++....+ ..-+.++.+.|+++|+.+++|-.
T Consensus 177 ~~~~v~v~~~~~~---~~~~~~~~~~A~~~g~~v~lD~s 212 (367)
T PLN02379 177 GSKWLVLRYGFYN---LEVIEAAIRLAKQEGLSVSLDLA 212 (367)
T ss_pred cCCEEEEEcccCC---HHHHHHHHHHHHHcCCEEEEecc
Confidence 4567777621111 12356777788888888888853
No 464
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=31.46 E-value=1.2e+02 Score=27.55 Aligned_cols=34 Identities=26% Similarity=0.314 Sum_probs=28.2
Q ss_pred CceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEE
Q 013210 186 RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVV 220 (447)
Q Consensus 186 ~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~li 220 (447)
.+..|+++-. |..|...+.+++.++|++||+.++
T Consensus 167 ~p~~vicEil-~~dG~ma~~~~~~~fA~~~~l~~i 200 (214)
T PRK01792 167 KEAGVICEIT-NDDGTMARTPEIVEFAKKFGYAVV 200 (214)
T ss_pred CceEEEEEEe-cCCCCccCHHHHHHHHHHcCCcEE
Confidence 3566777664 577999999999999999999886
No 465
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=31.24 E-value=38 Score=31.89 Aligned_cols=32 Identities=22% Similarity=0.362 Sum_probs=27.7
Q ss_pred cCCCCCccccCHHHHHHHHHhcCCEEEEeCCC
Q 013210 194 SISNPTLAVANIPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 194 ~~~NptG~v~~l~~I~~la~~~gi~livD~~~ 225 (447)
.++...|+..+++++++.||++|+.||+|-+.
T Consensus 43 ~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 43 AVDPRFGTMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp EESTTTBHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred ccccccchhhhhhhhhhccccccceEEEeeec
Confidence 35556788888999999999999999999886
No 466
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=31.10 E-value=3.7e+02 Score=24.73 Aligned_cols=105 Identities=17% Similarity=0.201 Sum_probs=59.9
Q ss_pred HHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCC------CeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-CHH
Q 013210 104 LSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSG------GHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-DHE 176 (447)
Q Consensus 104 l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~g------d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-d~~ 176 (447)
++..+..+...+.++|||. .|.......+...+ .++.+-.+ .+...+ .+ +|+.+.+++.+ +-+
T Consensus 41 l~~~l~~l~~~d~vvfTS~--~av~~~~~~l~~~~~~~~~~~~i~aVG~---~Ta~~l----~~-~G~~~~~~p~~~~~~ 110 (248)
T COG1587 41 LEVALEDLDSADWVVFTSP--NAVRFFFEALKEQGLDALKNKKIAAVGE---KTAEAL----RK-LGIKVDFIPEDGDSE 110 (248)
T ss_pred HHHHHhccccCCEEEEECH--HHHHHHHHHHHhhcccccccCeEEEEcH---HHHHHH----HH-hCCCCCcCCCccchH
Confidence 6777777766677888862 34444444333333 34444433 244444 23 68888887663 555
Q ss_pred HHHHhhccC---CceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCC
Q 013210 177 MVNSAIVQG---RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 177 ~l~~~i~~~---~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~ 225 (447)
.+...+... ..+++++-+. .|. +.+.+-..++|+-+..=++|
T Consensus 111 ~l~~~l~~~~~~~~~vl~~~~~---~~r----~~l~~~L~~~G~~v~~~~~Y 155 (248)
T COG1587 111 GLLEELPELLKGGKRVLILRGN---GGR----EVLEEKLEERGAEVREVEVY 155 (248)
T ss_pred HHHHHhhhhccCCCeEEEEcCC---Cch----HHHHHHHHhCCCEEEEEeee
Confidence 555555221 2355554322 222 56777778889988877777
No 467
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=31.09 E-value=42 Score=34.59 Aligned_cols=31 Identities=13% Similarity=0.198 Sum_probs=27.5
Q ss_pred CCCCCccccCHHHHHHHHHhcCCEEEEeCCC
Q 013210 195 ISNPTLAVANIPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 195 ~~NptG~v~~l~~I~~la~~~gi~livD~~~ 225 (447)
+....|+..+++++++.||++|+.||+|-|.
T Consensus 73 id~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 73 VRTKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred cCcCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 4456788889999999999999999999997
No 468
>PRK05580 primosome assembly protein PriA; Validated
Probab=31.06 E-value=1.9e+02 Score=31.25 Aligned_cols=51 Identities=16% Similarity=0.214 Sum_probs=27.5
Q ss_pred eCCh-HHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeC
Q 013210 120 TASG-MSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 171 (447)
Q Consensus 120 tsgg-t~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 171 (447)
|.|| |++...++...+..|..+++..|+-.-.......+... +|..+..+.
T Consensus 171 TGSGKT~v~l~~i~~~l~~g~~vLvLvPt~~L~~Q~~~~l~~~-fg~~v~~~~ 222 (679)
T PRK05580 171 TGSGKTEVYLQAIAEVLAQGKQALVLVPEIALTPQMLARFRAR-FGAPVAVLH 222 (679)
T ss_pred CCChHHHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHHHHHH-hCCCEEEEE
Confidence 4455 44443444444566888888888765554444333222 455554443
No 469
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=31.06 E-value=5.2e+02 Score=25.42 Aligned_cols=134 Identities=10% Similarity=0.106 Sum_probs=68.4
Q ss_pred CCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCc
Q 013210 82 GELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPR 161 (447)
Q Consensus 82 ~~~~~~~~~~~~~r~~~~~~~~l~~~ia~l~g~~~~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~ 161 (447)
+.|.|..+.|.|--.+...+..++ +..+-+|. .++.+.-....+..+... -|-+-+....-.. ..++.. ..+
T Consensus 135 g~~kpRtsp~sf~G~g~~gl~~L~-~~~~e~Gl-~~~tev~d~~~v~~~~~~----~d~lqIga~~~~n-~~LL~~-va~ 206 (352)
T PRK13396 135 GAYKPRTSPYAFQGHGESALELLA-AAREATGL-GIITEVMDAADLEKIAEV----ADVIQVGARNMQN-FSLLKK-VGA 206 (352)
T ss_pred eeecCCCCCcccCCchHHHHHHHH-HHHHHcCC-cEEEeeCCHHHHHHHHhh----CCeEEECcccccC-HHHHHH-HHc
Confidence 445554555666433323333333 23333444 244444445555555432 2444444433222 233322 223
Q ss_pred ccCeeEEEeCC---CCHHHHHHhhc----cCCceEEEEEc-----CCCCCccccCHHHHHHHHHhcCCEEEEeCCC
Q 013210 162 ACNITTTFVDI---SDHEMVNSAIV----QGRTKVLYFES-----ISNPTLAVANIPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 162 ~~g~~~~~v~~---~d~~~l~~~i~----~~~t~lV~i~~-----~~NptG~v~~l~~I~~la~~~gi~livD~~~ 225 (447)
.|..+. +.. .+++++..+++ ..+..+++++- .+..+-...|+..|..+.+..+..+|+|.+|
T Consensus 207 -t~kPVl-lk~G~~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH 280 (352)
T PRK13396 207 -QDKPVL-LKRGMAATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSH 280 (352)
T ss_pred -cCCeEE-EeCCCCCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcc
Confidence 354333 222 16777666542 34556777754 2122235568999998877779999999998
No 470
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=30.94 E-value=78 Score=28.02 Aligned_cols=73 Identities=18% Similarity=0.286 Sum_probs=46.1
Q ss_pred CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCccCCCCeEEEeCCCcccc
Q 013210 174 DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSPARLGADVVVHSISKFIS 249 (447)
Q Consensus 174 d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~~~~g~di~~~S~sK~~g 249 (447)
.++++.+.+ .-...+|.+..-.-+.- .+++++.+-.|++..+++-|..--.-.....++|+|++..+++=+-.
T Consensus 53 T~~ev~~l~-~aGadIIAlDaT~R~Rp--~~l~~li~~i~~~~~l~MADist~ee~~~A~~~G~D~I~TTLsGYT~ 125 (192)
T PF04131_consen 53 TLKEVDALA-EAGADIIALDATDRPRP--ETLEELIREIKEKYQLVMADISTLEEAINAAELGFDIIGTTLSGYTP 125 (192)
T ss_dssp SHHHHHHHH-HCT-SEEEEE-SSSS-S--S-HHHHHHHHHHCTSEEEEE-SSHHHHHHHHHTT-SEEE-TTTTSST
T ss_pred CHHHHHHHH-HcCCCEEEEecCCCCCC--cCHHHHHHHHHHhCcEEeeecCCHHHHHHHHHcCCCEEEcccccCCC
Confidence 678888877 56677888876544333 78999999999888999999653111123456799999988765443
No 471
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=30.89 E-value=5.2e+02 Score=25.30 Aligned_cols=124 Identities=16% Similarity=0.061 Sum_probs=61.4
Q ss_pred EEEeCChHHHHHHHHHHhcC--CCCeEEEeCCCchhHHHHH---HhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEE
Q 013210 117 AYCTASGMSAISSVLMQLCS--SGGHVVAARTLYGGTHALL---THFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLY 191 (447)
Q Consensus 117 ~~~tsggt~A~~~al~~l~~--~gd~Vi~~~~~y~~~~~~~---~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~ 191 (447)
+.+..|-.+.-.--+..|+. +|-.+|+.+..|+-....+ +..-.......+.-=++-+.+..++++ ......|-
T Consensus 99 ~~vavG~~~~d~er~~~L~~~~~g~D~iviD~AhGhs~~~i~~ik~ik~~~P~~~vIaGNV~T~e~a~~Li-~aGAD~vK 177 (346)
T PRK05096 99 VMVSTGTSDADFEKTKQILALSPALNFICIDVANGYSEHFVQFVAKAREAWPDKTICAGNVVTGEMVEELI-LSGADIVK 177 (346)
T ss_pred EEEEecCCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHHhCCCCcEEEecccCHHHHHHHH-HcCCCEEE
Confidence 33333333333333444544 4645566565654333332 111111112333333344788888777 43344443
Q ss_pred -------EEcCCCCCccccC----HHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEE
Q 013210 192 -------FESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVV 241 (447)
Q Consensus 192 -------i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~ 241 (447)
+|+..-.+|.=.| +.+.++.++++|+.+|.|.-. .+-....+..|+|.++
T Consensus 178 VGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADGGi~~sGDI~KAlaaGAd~VM 240 (346)
T PRK05096 178 VGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGCTVPGDVAKAFGGGADFVM 240 (346)
T ss_pred EcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecCCcccccHHHHHHHcCCCEEE
Confidence 2222333443333 557777888999999999642 1111123345888777
No 472
>PRK06036 translation initiation factor IF-2B subunit alpha; Provisional
Probab=30.84 E-value=4.9e+02 Score=25.50 Aligned_cols=87 Identities=23% Similarity=0.301 Sum_probs=47.4
Q ss_pred HHHHhcCCCC--eEEEe--CCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEE--EcCCCCCcccc
Q 013210 130 VLMQLCSSGG--HVVAA--RTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYF--ESISNPTLAVA 203 (447)
Q Consensus 130 al~~l~~~gd--~Vi~~--~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i--~~~~NptG~v~ 203 (447)
.|+...+.|+ +|++. .|...+.......+ .+ .|++++.+. | ..+-..+++.++..|++ +.+... |.+.
T Consensus 171 ~l~~A~~~gk~~~V~v~EtRP~~qG~rlta~eL-~~-~GI~vtlI~--D-sa~~~~M~~~~Vd~VivGAd~I~an-Gv~N 244 (339)
T PRK06036 171 VIRSAVEQGKEIKVIACETRPLNQGSRLTTWEL-MQ-DNIPVTLIT--D-SMAGIVMRQGMVDKVIVGADRITRD-AVFN 244 (339)
T ss_pred HHHHHHHcCCceEEEEcCCCchhhHHHHHHHHH-HH-cCCCEEEEe--h-hHHHHHhccCCCCEEEECccchhhc-Ceeh
Confidence 3334344454 55654 45555544332222 23 699988874 2 23344453445777776 233322 6444
Q ss_pred CH--HHHHHHHHhcCCEEEEe
Q 013210 204 NI--PELSRLAHDKGVTVVVD 222 (447)
Q Consensus 204 ~l--~~I~~la~~~gi~livD 222 (447)
.+ -.|+-+|+.||++|++=
T Consensus 245 KiGT~~lA~~Ak~~~vPfyV~ 265 (339)
T PRK06036 245 KIGTYTHSVLAKEHEIPFYVA 265 (339)
T ss_pred hhhHHHHHHHHHHhCCCEEEE
Confidence 33 36777889999988863
No 473
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=30.54 E-value=4.6e+02 Score=25.87 Aligned_cols=90 Identities=19% Similarity=0.166 Sum_probs=48.6
Q ss_pred ChHHHHHHHHHHhcCCCC--eEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEEcCCCCC
Q 013210 122 SGMSAISSVLMQLCSSGG--HVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPT 199 (447)
Q Consensus 122 ggt~A~~~al~~l~~~gd--~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~Npt 199 (447)
+|.-+-..+ ..|.+.++ +|++....-.......... .. ..++...+|..|.++|.+.+ +. ..+|+-+.+..
T Consensus 6 ~G~vG~~~~-~~L~~~~~~~~v~va~r~~~~~~~~~~~~-~~-~~~~~~~~d~~~~~~l~~~~-~~-~dvVin~~gp~-- 78 (386)
T PF03435_consen 6 AGRVGSAIA-RLLARRGPFEEVTVADRNPEKAERLAEKL-LG-DRVEAVQVDVNDPESLAELL-RG-CDVVINCAGPF-- 78 (386)
T ss_dssp -SHHHHHHH-HHHHCTTCE-EEEEEESSHHHHHHHHT---TT-TTEEEEE--TTTHHHHHHHH-TT-SSEEEE-SSGG--
T ss_pred CcHHHHHHH-HHHhcCCCCCcEEEEECCHHHHHHHHhhc-cc-cceeEEEEecCCHHHHHHHH-hc-CCEEEECCccc--
Confidence 354444333 44555443 6777666544333333211 12 46778888888999999988 43 35655433221
Q ss_pred ccccCHHHHHHHHHhcCCEEEEeC
Q 013210 200 LAVANIPELSRLAHDKGVTVVVDN 223 (447)
Q Consensus 200 G~v~~l~~I~~la~~~gi~livD~ 223 (447)
.-..|++.|-++|+. .+|-
T Consensus 79 ----~~~~v~~~~i~~g~~-yvD~ 97 (386)
T PF03435_consen 79 ----FGEPVARACIEAGVH-YVDT 97 (386)
T ss_dssp ----GHHHHHHHHHHHT-E-EEES
T ss_pred ----hhHHHHHHHHHhCCC-eecc
Confidence 345788888888887 4553
No 474
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=30.51 E-value=3.5e+02 Score=25.39 Aligned_cols=81 Identities=10% Similarity=0.156 Sum_probs=40.9
Q ss_pred CeEEEeCCCchhHHHHHHhhcCcccCeeEEE-eCCC-CHHHHHHhhccCCceEEEEEcCCCCCcccc----CHHHHHHHH
Q 013210 139 GHVVAARTLYGGTHALLTHFFPRACNITTTF-VDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVA----NIPELSRLA 212 (447)
Q Consensus 139 d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~-v~~~-d~~~l~~~i~~~~t~lV~i~~~~NptG~v~----~l~~I~~la 212 (447)
|-|++++.-+....... ..+.+ .|+...+ +.+. +.+.++... +.....|++.+....||.-. .++++.+..
T Consensus 121 dgviipDLP~ee~~~~~-~~~~~-~gi~~I~lv~PtT~~eri~~i~-~~a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~i 197 (263)
T CHL00200 121 KGLIIPDLPYEESDYLI-SVCNL-YNIELILLIAPTSSKSRIQKIA-RAAPGCIYLVSTTGVTGLKTELDKKLKKLIETI 197 (263)
T ss_pred eEEEecCCCHHHHHHHH-HHHHH-cCCCEEEEECCCCCHHHHHHHH-HhCCCcEEEEcCCCCCCCCccccHHHHHHHHHH
Confidence 56777665554333333 22222 4655433 3333 445555544 33344777766666777642 245555555
Q ss_pred Hhc-CCEEEEe
Q 013210 213 HDK-GVTVVVD 222 (447)
Q Consensus 213 ~~~-gi~livD 222 (447)
|++ +..+.+|
T Consensus 198 r~~t~~Pi~vG 208 (263)
T CHL00200 198 KKMTNKPIILG 208 (263)
T ss_pred HHhcCCCEEEE
Confidence 543 5555554
No 475
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=29.74 E-value=2.6e+02 Score=22.44 Aligned_cols=63 Identities=17% Similarity=0.238 Sum_probs=39.6
Q ss_pred hhcCcccCeeEEEeCCC-CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhc---CCEEEEe
Q 013210 157 HFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK---GVTVVVD 222 (447)
Q Consensus 157 ~~~~~~~g~~~~~v~~~-d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~---gi~livD 222 (447)
.++.. .|+++.+...+ .++++.+++.+.+..+|.++.... -....++++++..++. ++.+++=
T Consensus 21 ~~l~~-~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~--~~~~~~~~~~~~L~~~~~~~i~i~~G 87 (122)
T cd02071 21 RALRD-AGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSG--GHMTLFPEVIELLRELGAGDILVVGG 87 (122)
T ss_pred HHHHH-CCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccch--hhHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 44444 79999987665 566776666466778888765542 2333467777777765 3444443
No 476
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=29.73 E-value=16 Score=31.85 Aligned_cols=80 Identities=18% Similarity=0.304 Sum_probs=47.0
Q ss_pred CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCC--EEEEeCCCCCCCCCccCCCCeEEEeCCCccccCC
Q 013210 174 DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGV--TVVVDNTFSPLVLSPARLGADVVVHSISKFISGG 251 (447)
Q Consensus 174 d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi--~livD~~~~~~~~~~~~~g~di~~~S~sK~~g~~ 251 (447)
+.++++.++ +.+...|++. +|.+..++.+.+.++++|- ++|+|-+ .++..+ +.+++++ .+.+.+-
T Consensus 8 ~~~~l~~al-~s~~~~vfLl-----~g~I~~l~~~v~~~~~~gK~vfVHiDli-~Gl~~D--~~~i~~L----~~~~~~d 74 (175)
T PF04309_consen 8 DEEDLEKAL-ESDVEVVFLL-----TGDIGNLKDIVKRLKAAGKKVFVHIDLI-EGLSRD--EAGIEYL----KEYGKPD 74 (175)
T ss_dssp CCCCCCCCC-CSSSSEEEE------SEECCCHHHHHHHHHHTT-EEEEECCGE-ETB-SS--HHHHHHH----HHTT--S
T ss_pred CHHHHHHHH-cCCCCEEEEE-----cCcHHHHHHHHHHHHHcCCEEEEEehhc-CCCCCC--HHHHHHH----HHcCCCc
Confidence 445566677 5567777763 4788999999999999885 4555533 233222 1222222 1222222
Q ss_pred CCeeEEEEEcChHHHHHHHH
Q 013210 252 ADIIAGAVCGPANLVNSMMD 271 (447)
Q Consensus 252 g~~igG~l~~~~~~~~~l~~ 271 (447)
|.+..+..+++..+.
T Consensus 75 -----GIISTk~~~i~~Ak~ 89 (175)
T PF04309_consen 75 -----GIISTKSNLIKRAKK 89 (175)
T ss_dssp -----EEEESSHHHHHHHHH
T ss_pred -----EEEeCCHHHHHHHHH
Confidence 778888888776654
No 477
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=29.23 E-value=1e+02 Score=27.44 Aligned_cols=33 Identities=15% Similarity=0.173 Sum_probs=26.1
Q ss_pred EEEEEcCCCCCccccCHHHHHHHHHhcCCEEEE
Q 013210 189 VLYFESISNPTLAVANIPELSRLAHDKGVTVVV 221 (447)
Q Consensus 189 lV~i~~~~NptG~v~~l~~I~~la~~~gi~liv 221 (447)
+|.+.-.+|..|.+.|++.-+++++++|+.++.
T Consensus 115 vILLTDG~n~~~~i~P~~aAa~lA~~~gV~iyt 147 (191)
T cd01455 115 VIVLSDANLERYGIQPKKLADALAREPNVNAFV 147 (191)
T ss_pred EEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEE
Confidence 455567777888998888778999999987664
No 478
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=28.74 E-value=2.9e+02 Score=22.24 Aligned_cols=60 Identities=20% Similarity=0.177 Sum_probs=37.6
Q ss_pred cCeeEEEeCCCCHHHHHHhhcc-CCceEEEEEcCCCCCccccCHHHHHHHHHhcC--CEEEEeCCC
Q 013210 163 CNITTTFVDISDHEMVNSAIVQ-GRTKVLYFESISNPTLAVANIPELSRLAHDKG--VTVVVDNTF 225 (447)
Q Consensus 163 ~g~~~~~v~~~d~~~l~~~i~~-~~t~lV~i~~~~NptG~v~~l~~I~~la~~~g--i~livD~~~ 225 (447)
.|..+...+....+...+.+.. .+.++|.+.. .+.......++++..|+.+ +.+++=..+
T Consensus 15 ~g~~v~~~~~~~~~~~~~~~~~~~~pdiv~~S~---~~~~~~~~~~~~~~ik~~~p~~~iv~GG~~ 77 (127)
T cd02068 15 AGFIVAEHDVLSADDIVEDIKELLKPDVVGISL---MTSAIYEALELAKIAKEVLPNVIVVVGGPH 77 (127)
T ss_pred CCCeeeecCCCCHHHHHHHHHHhcCCCEEEEee---ccccHHHHHHHHHHHHHHCCCCEEEECCcc
Confidence 5777777776666555555523 5677777653 2223335677888888764 888776665
No 479
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=28.42 E-value=2.2e+02 Score=23.55 Aligned_cols=66 Identities=11% Similarity=0.131 Sum_probs=41.4
Q ss_pred chhHHHHHHhhcCcccCeeEEEeCCC-CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcC
Q 013210 148 YGGTHALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKG 216 (447)
Q Consensus 148 y~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~g 216 (447)
|.--...+..++.. .|+++.....+ +++++.++..+.+..+|.+++-. +....-++++.+..++.+
T Consensus 15 Hd~g~~iv~~~l~~-~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~--~~~~~~~~~~~~~L~~~g 81 (132)
T TIGR00640 15 HDRGAKVIATAYAD-LGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLA--GGHLTLVPALRKELDKLG 81 (132)
T ss_pred cHHHHHHHHHHHHh-CCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCch--hhhHHHHHHHHHHHHhcC
Confidence 33333444445554 79999887665 56666554436778888886544 334445788888777764
No 480
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=28.33 E-value=4.6e+02 Score=23.88 Aligned_cols=122 Identities=13% Similarity=0.230 Sum_probs=63.2
Q ss_pred HHhcCCCCeEEEeCCC-chhHHHHHHhhcCcccCee--EEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccc-c-C--
Q 013210 132 MQLCSSGGHVVAARTL-YGGTHALLTHFFPRACNIT--TTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAV-A-N-- 204 (447)
Q Consensus 132 ~~l~~~gd~Vi~~~~~-y~~~~~~~~~~~~~~~g~~--~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v-~-~-- 204 (447)
..+.+.|-..|+.-.+ ....+..++.. .. .|++ +..-|.+.++.++..+ ++..+|.++++|--.|-- . |
T Consensus 78 ~~fa~agad~It~H~E~~~~~~r~i~~I-k~-~G~kaGv~lnP~Tp~~~i~~~l--~~vD~VllMsVnPGfgGQ~Fi~~~ 153 (220)
T COG0036 78 EAFAKAGADIITFHAEATEHIHRTIQLI-KE-LGVKAGLVLNPATPLEALEPVL--DDVDLVLLMSVNPGFGGQKFIPEV 153 (220)
T ss_pred HHHHHhCCCEEEEEeccCcCHHHHHHHH-HH-cCCeEEEEECCCCCHHHHHHHH--hhCCEEEEEeECCCCcccccCHHH
Confidence 3344455444444433 22234444322 22 4544 4455666788888877 457788888875333322 1 1
Q ss_pred HHHH---HHHHHhc-CCEEEEeCCCCCCCCC----ccCCCCeEEEeCCCccccCCCCeeEEEEEcChHHHHHHHHHh
Q 013210 205 IPEL---SRLAHDK-GVTVVVDNTFSPLVLS----PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH 273 (447)
Q Consensus 205 l~~I---~~la~~~-gi~livD~~~~~~~~~----~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~ 273 (447)
+++| .++..+. ++.+=+|. ++..+ ....|+|+++. |.++...+++.+.++.++
T Consensus 154 l~Ki~~lr~~~~~~~~~~IeVDG---GI~~~t~~~~~~AGad~~Va-------------GSalF~~~d~~~~i~~~~ 214 (220)
T COG0036 154 LEKIRELRAMIDERLDILIEVDG---GINLETIKQLAAAGADVFVA-------------GSALFGADDYKATIRELR 214 (220)
T ss_pred HHHHHHHHHHhcccCCeEEEEeC---CcCHHHHHHHHHcCCCEEEE-------------EEEEeCCccHHHHHHHHH
Confidence 4444 4444432 46677884 33322 23348888772 245565555555555443
No 481
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=28.26 E-value=53 Score=34.47 Aligned_cols=35 Identities=20% Similarity=0.304 Sum_probs=29.5
Q ss_pred cCCCCCccccCHHHHHHHHHhcCCEEEEeCCCCCC
Q 013210 194 SISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPL 228 (447)
Q Consensus 194 ~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~ 228 (447)
.|....|...+++++++.||++|+-||+|-++.++
T Consensus 151 ~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~ 185 (542)
T TIGR02402 151 APHNAYGGPDDLKALVDAAHGLGLGVILDVVYNHF 185 (542)
T ss_pred ccccccCCHHHHHHHHHHHHHCCCEEEEEEccCCC
Confidence 45566788888999999999999999999998443
No 482
>PRK05772 translation initiation factor IF-2B subunit alpha; Provisional
Probab=28.18 E-value=5.8e+02 Score=25.23 Aligned_cols=86 Identities=15% Similarity=0.127 Sum_probs=45.0
Q ss_pred HHHhcCCCC--eEEEeC--CCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhccCCceEEEEE--cCCCCCcccc-
Q 013210 131 LMQLCSSGG--HVVAAR--TLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFE--SISNPTLAVA- 203 (447)
Q Consensus 131 l~~l~~~gd--~Vi~~~--~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~t~lV~i~--~~~NptG~v~- 203 (447)
++.....|. +|++.+ |...+....... +.+ .|++++.+.-.. +-..+.+.++..|++- .+. ..|.+.
T Consensus 192 i~~a~~~gk~f~V~v~EsRP~~qG~rlta~e-L~~-~GIpvtlI~Dsa---~~~~m~~~~Vd~VivGAD~I~-~NG~v~N 265 (363)
T PRK05772 192 VKLAKALGMSVSVIAPETRPWLQGSRLTVYE-LME-EGIKVTLITDTA---VGLVMYKDMVNNVMVGADRIL-RDGHVFN 265 (363)
T ss_pred HHHHHHCCCeEEEEECCCCccchhHHHHHHH-HHH-CCCCEEEEehhH---HHHHHhhcCCCEEEECccEEe-cCCCEee
Confidence 344444554 555543 555665333322 333 699988874222 2223323456666662 222 233332
Q ss_pred CH--HHHHHHHHhcCCEEEEe
Q 013210 204 NI--PELSRLAHDKGVTVVVD 222 (447)
Q Consensus 204 ~l--~~I~~la~~~gi~livD 222 (447)
.+ -.|+-+|+.||++|++=
T Consensus 266 KiGTy~lA~~Ak~~~vPfyV~ 286 (363)
T PRK05772 266 KIGTFKEAVIAHELGIPFYAL 286 (363)
T ss_pred hhhhHHHHHHHHHhCCCEEEE
Confidence 22 36777889999988764
No 483
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=28.15 E-value=3.2e+02 Score=25.94 Aligned_cols=113 Identities=19% Similarity=0.298 Sum_probs=68.2
Q ss_pred CCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCC-CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcC
Q 013210 138 GGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKG 216 (447)
Q Consensus 138 gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~g 216 (447)
|...+..-|.|..+.+.++.. . ....+.+|+.. -.|++.+++ +...++|++-+-+=| +.|.-++.+.+++.|
T Consensus 44 gG~~~~g~PVf~tV~EA~~~~--~-a~~svI~Vp~~~aadai~EAi-da~i~liv~ITEgIP---~~D~~~~~~~a~~~g 116 (293)
T COG0074 44 GGQTILGLPVFNTVEEAVKET--G-ANASVIFVPPPFAADAILEAI-DAGIKLVVIITEGIP---VLDMLELKRYAREKG 116 (293)
T ss_pred CceEEcCccHHHHHHHHHHhh--C-CCEEEEecCcHHHHHHHHHHH-hCCCcEEEEEeCCCC---HHHHHHHHHHHHhcC
Confidence 446666678787777777443 2 46678888765 566777788 544666665443322 357778899999999
Q ss_pred CEEEEeCCCCCCCCCccCCCCeEEEeCCCccccCCCCeeEEEEEcChHH
Q 013210 217 VTVVVDNTFSPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANL 265 (447)
Q Consensus 217 i~livD~~~~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~ 265 (447)
..++==++-+- ..|.+. -+-.--++.|. +|. + |++..+-.+
T Consensus 117 ~~iiGPncpGi--I~Pg~~---kiGimp~~i~~-~G~-I-GiVSrSGTL 157 (293)
T COG0074 117 TRLIGPNCPGI--ITPGEC---KIGIMPGNIYK-PGN-I-GIVSRSGTL 157 (293)
T ss_pred CEEECCCCCcc--CcCCcc---eeeechhhhcc-CCc-e-EEEecCcch
Confidence 88876555322 222211 11111356665 553 6 888666544
No 484
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair]
Probab=28.11 E-value=4.3e+02 Score=23.42 Aligned_cols=111 Identities=8% Similarity=0.024 Sum_probs=61.4
Q ss_pred CCCchHHHHHHHHHHHhCCC-----e--EEEeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccC--ee
Q 013210 96 HFNPTVLNLSRQMAALEGTE-----A--AYCTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACN--IT 166 (447)
Q Consensus 96 ~~~~~~~~l~~~ia~l~g~~-----~--~~~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g--~~ 166 (447)
...|+....++.+=.+++.. . -+|..||.-++.++-++ .+.++..+..-....... .-... .+ ..
T Consensus 21 ~~RPT~drVREalFNil~~~~i~g~~~LDlFAGSGaLGlEAlSRG----A~~~~~vE~~~~a~~~l~-~N~~~-l~~~~~ 94 (187)
T COG0742 21 GTRPTTDRVREALFNILAPDEIEGARVLDLFAGSGALGLEALSRG----AARVVFVEKDRKAVKILK-ENLKA-LGLEGE 94 (187)
T ss_pred CcCCCchHHHHHHHHhccccccCCCEEEEecCCccHhHHHHHhCC----CceEEEEecCHHHHHHHH-HHHHH-hCCccc
Confidence 45567777777777776542 1 26788888777765442 245666655544333222 22221 33 34
Q ss_pred EEEeCCCCHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHH
Q 013210 167 TTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAH 213 (447)
Q Consensus 167 ~~~v~~~d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~ 213 (447)
...+..+....|..+-..+.-.+|++..|.+ -|.+.....+..+.+
T Consensus 95 ~~~~~~da~~~L~~~~~~~~FDlVflDPPy~-~~l~~~~~~~~~~~~ 140 (187)
T COG0742 95 ARVLRNDALRALKQLGTREPFDLVFLDPPYA-KGLLDKELALLLLEE 140 (187)
T ss_pred eEEEeecHHHHHHhcCCCCcccEEEeCCCCc-cchhhHHHHHHHHHh
Confidence 5555444444444443222378999999988 455544445544333
No 485
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=27.95 E-value=2.4e+02 Score=20.48 Aligned_cols=52 Identities=13% Similarity=0.183 Sum_probs=28.6
Q ss_pred CeeEEEeCCCCHHHHH--HhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEE
Q 013210 164 NITTTFVDISDHEMVN--SAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVV 220 (447)
Q Consensus 164 g~~~~~v~~~d~~~l~--~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~li 220 (447)
|.++..++........ ..+ +++.-++.+.. .|.-.++.++++.++++|+.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~-~~~d~~i~iS~----sg~t~~~~~~~~~a~~~g~~ii 78 (87)
T cd04795 25 GIEVVALIATELEHASLLSLL-RKGDVVIALSY----SGRTEELLAALEIAKELGIPVI 78 (87)
T ss_pred CCceEEeCCcHHHHHHHHhcC-CCCCEEEEEEC----CCCCHHHHHHHHHHHHcCCeEE
Confidence 5555554433322222 223 44444555433 3445567888889999887665
No 486
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=27.93 E-value=1.6e+02 Score=24.78 Aligned_cols=51 Identities=10% Similarity=0.003 Sum_probs=35.6
Q ss_pred CHHHHHHhhccCCceEEEEEcCCCCCccccCHH-HHHHHHH----hcCCE-EEEeCC
Q 013210 174 DHEMVNSAIVQGRTKVLYFESISNPTLAVANIP-ELSRLAH----DKGVT-VVVDNT 224 (447)
Q Consensus 174 d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~-~I~~la~----~~gi~-livD~~ 224 (447)
+.+.|.+.++..++..|++-.|.|+.|...+.. .+.++++ +.++. ...||=
T Consensus 41 ~~~~l~~li~~~~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DER 97 (141)
T COG0816 41 DFNALLKLVKEYQVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDER 97 (141)
T ss_pred hHHHHHHHHHHhCCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 677888888667888999999999999998744 2333333 34554 346764
No 487
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=27.85 E-value=2.6e+02 Score=26.95 Aligned_cols=81 Identities=11% Similarity=0.160 Sum_probs=41.1
Q ss_pred CCeEEEeCChHHHHHHHHHHhcCCC--CeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHH---HHHHhhccCCce
Q 013210 114 TEAAYCTASGMSAISSVLMQLCSSG--GHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHE---MVNSAIVQGRTK 188 (447)
Q Consensus 114 ~~~~~~tsggt~A~~~al~~l~~~g--d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~---~l~~~i~~~~t~ 188 (447)
...++..++|-.+..+|..+-. .| -.|+++...-......+ .. +|.++..++.+..+ .+.+.+...+..
T Consensus 51 ~~~vv~aSsGN~g~alA~~a~~-~G~~~~iv~p~~~~~~k~~~l----~~-~GA~v~~~~~~~~~~~~~~~~~l~~~~~~ 124 (316)
T cd06448 51 CVHVVCSSGGNAGLAAAYAARK-LGVPCTIVVPESTKPRVVEKL----RD-EGATVVVHGKVWWEADNYLREELAENDPG 124 (316)
T ss_pred CCeEEEeCCcHHHHHHHHHHHH-cCCCEEEEECCCCCHHHHHHH----HH-cCCEEEEECCchHHHHHHHHHHHHhccCC
Confidence 4557777888888777765432 24 24455543322223332 23 79999888754122 222233222224
Q ss_pred EEEEEcCCCCCc
Q 013210 189 VLYFESISNPTL 200 (447)
Q Consensus 189 lV~i~~~~NptG 200 (447)
..++..-+||.+
T Consensus 125 ~~~~~~~~n~~~ 136 (316)
T cd06448 125 PVYVHPFDDPLI 136 (316)
T ss_pred cEEeCCCCCchh
Confidence 555544345543
No 488
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=27.79 E-value=2.8e+02 Score=24.55 Aligned_cols=98 Identities=11% Similarity=0.155 Sum_probs=57.0
Q ss_pred eEEEeCC--CchhHHH-HHHhhcCcccCeeEEEeCCC-CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhc
Q 013210 140 HVVAART--LYGGTHA-LLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK 215 (447)
Q Consensus 140 ~Vi~~~~--~y~~~~~-~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~ 215 (447)
+|++..+ ++|..-. .+..++.. .|+++.++-.+ .++++.+.+++.++.+|.+...... ....++++.+.+++.
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~-~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~--~~~~~~~~i~~l~~~ 162 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRA-NGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTT--TMYGQKDINDKLKEE 162 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHh-CCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcccccc--CHHHHHHHHHHHHHc
Confidence 5554433 3444332 22334444 79999988766 6788888886677778777544332 244577888888776
Q ss_pred C----CEEEEeCCCCCCCCCc---cCCCCeEEEeCC
Q 013210 216 G----VTVVVDNTFSPLVLSP---ARLGADVVVHSI 244 (447)
Q Consensus 216 g----i~livD~~~~~~~~~~---~~~g~di~~~S~ 244 (447)
+ +.+++=.. .+++ ..+|+|.+..+.
T Consensus 163 ~~~~~v~i~vGG~----~~~~~~~~~~gad~~~~da 194 (197)
T TIGR02370 163 GYRDSVKFMVGGA----PVTQDWADKIGADVYGENA 194 (197)
T ss_pred CCCCCCEEEEECh----hcCHHHHHHhCCcEEeCCh
Confidence 3 55555432 2221 234677665443
No 489
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=27.22 E-value=2e+02 Score=26.97 Aligned_cols=46 Identities=13% Similarity=0.220 Sum_probs=30.5
Q ss_pred CHHHHHHhhccCCceEEEEEcCCCCCcc----ccCHHHHHHHHHhcCCEEEEeCC
Q 013210 174 DHEMVNSAIVQGRTKVLYFESISNPTLA----VANIPELSRLAHDKGVTVVVDNT 224 (447)
Q Consensus 174 d~~~l~~~i~~~~t~lV~i~~~~NptG~----v~~l~~I~~la~~~gi~livD~~ 224 (447)
+.+.+++.+ ++.-+|++-.- .|. ...+++|.+.++++++++++|+-
T Consensus 91 av~~i~k~L--~RlhavVIGPG---LGRdp~~~k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 91 AVDIIEKLL--QRLHAVVIGPG---LGRDPAILKEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred hHhHHHHHH--hheeEEEECCC---CCCCHHHHHHHHHHHHHHhcCCCcEEEcCC
Confidence 455566655 34556655321 333 23478999999999999999974
No 490
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=26.81 E-value=1.4e+02 Score=26.94 Aligned_cols=70 Identities=17% Similarity=0.276 Sum_probs=39.5
Q ss_pred CHHHHHHhhccCCceEEEEEcC--CCCCccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCccCCCCeEEEeCCCcc
Q 013210 174 DHEMVNSAIVQGRTKVLYFESI--SNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSPARLGADVVVHSISKF 247 (447)
Q Consensus 174 d~~~l~~~i~~~~t~lV~i~~~--~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~~~~g~di~~~S~sK~ 247 (447)
.++++++++ .....+|.+... .-|.| +++++.+-.|..|.++..|..--.-.....++|+|++-.++|=+
T Consensus 87 tlkeVd~L~-~~Ga~IIA~DaT~R~RP~~---~~~~~i~~~k~~~~l~MAD~St~ee~l~a~~~G~D~IGTTLsGY 158 (229)
T COG3010 87 TLKEVDALA-EAGADIIAFDATDRPRPDG---DLEELIARIKYPGQLAMADCSTFEEGLNAHKLGFDIIGTTLSGY 158 (229)
T ss_pred cHHHHHHHH-HCCCcEEEeecccCCCCcc---hHHHHHHHhhcCCcEEEeccCCHHHHHHHHHcCCcEEecccccc
Confidence 455666655 444556655433 33444 66777766666777777776531112233455777776665443
No 491
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=26.66 E-value=4.2e+02 Score=24.59 Aligned_cols=88 Identities=15% Similarity=0.126 Sum_probs=49.0
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhcc----CC-ceEEEEE
Q 013210 119 CTASGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQ----GR-TKVLYFE 193 (447)
Q Consensus 119 ~tsggt~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~----~~-t~lV~i~ 193 (447)
+.++|.-+-..+ ..|++.|.+|.+..-.-... .. .++++...+..|.+.|.++++. .. ...|++.
T Consensus 5 tGatG~iG~~vv-~~L~~~g~~V~~~~R~~~~~--------~~-~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~ 74 (285)
T TIGR03649 5 TGGTGKTASRIA-RLLQAASVPFLVASRSSSSS--------AG-PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLV 74 (285)
T ss_pred EcCCChHHHHHH-HHHHhCCCcEEEEeCCCccc--------cC-CCCccccccCCCHHHHHHHHhcccCcCCceeEEEEe
Confidence 344566555444 44566676655433211110 01 3555556677899999888721 23 5666665
Q ss_pred cCCCCCccccCHHHHHHHHHhcCC
Q 013210 194 SISNPTLAVANIPELSRLAHDKGV 217 (447)
Q Consensus 194 ~~~NptG~v~~l~~I~~la~~~gi 217 (447)
.+..+ ........+.+.|++.|+
T Consensus 75 ~~~~~-~~~~~~~~~i~aa~~~gv 97 (285)
T TIGR03649 75 APPIP-DLAPPMIKFIDFARSKGV 97 (285)
T ss_pred CCCCC-ChhHHHHHHHHHHHHcCC
Confidence 54322 223346678888888886
No 492
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=26.44 E-value=1.8e+02 Score=23.96 Aligned_cols=52 Identities=15% Similarity=0.152 Sum_probs=36.1
Q ss_pred CHHHHHHhhccCCceEEEEEcCCCCCccccCHH----HHH-HHHHhcCCE-EEEeCCC
Q 013210 174 DHEMVNSAIVQGRTKVLYFESISNPTLAVANIP----ELS-RLAHDKGVT-VVVDNTF 225 (447)
Q Consensus 174 d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~----~I~-~la~~~gi~-livD~~~ 225 (447)
+.+.|.+.++..++..|++-.|-|+.|...+.. +.+ ++.+++++. ..+||-+
T Consensus 36 ~~~~l~~~i~~~~~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~ 93 (130)
T TIGR00250 36 DWSRIEELLKEWTPDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDERL 93 (130)
T ss_pred HHHHHHHHHHHcCCCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCc
Confidence 577788877666788999999999999987632 222 233344654 4588876
No 493
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=25.92 E-value=3.4e+02 Score=21.58 Aligned_cols=37 Identities=16% Similarity=0.253 Sum_probs=21.5
Q ss_pred cCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEE--EEeCC
Q 013210 184 QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTV--VVDNT 224 (447)
Q Consensus 184 ~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~l--ivD~~ 224 (447)
.++..+|++.. .|.-.++-++++.++++|+.+ |.++.
T Consensus 59 ~~~~~~i~iS~----~g~~~~~~~~~~~a~~~g~~iv~iT~~~ 97 (139)
T cd05013 59 TPGDVVIAISF----SGETKETVEAAEIAKERGAKVIAITDSA 97 (139)
T ss_pred CCCCEEEEEeC----CCCCHHHHHHHHHHHHcCCeEEEEcCCC
Confidence 34444555432 344456777888888887544 45543
No 494
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=25.75 E-value=3.7e+02 Score=26.83 Aligned_cols=86 Identities=10% Similarity=0.158 Sum_probs=50.0
Q ss_pred CCCeE--EEeCCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHHHhhcc-CCceEEEEEcCCCCCccccCHHHHHHHHH
Q 013210 137 SGGHV--VAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQ-GRTKVLYFESISNPTLAVANIPELSRLAH 213 (447)
Q Consensus 137 ~gd~V--i~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~t~lV~i~~~~NptG~v~~l~~I~~la~ 213 (447)
.|..| +..++.-.+....+..+... .|+++..+ .+.+++.+.+.. .+..+|++..+.-.......+.++.++.+
T Consensus 205 ~g~~V~lit~Dt~R~aa~eQL~~~a~~-lgvpv~~~--~~~~~l~~~L~~~~~~DlVLIDTaGr~~~~~~~l~el~~~l~ 281 (388)
T PRK12723 205 KSLNIKIITIDNYRIGAKKQIQTYGDI-MGIPVKAI--ESFKDLKEEITQSKDFDLVLVDTIGKSPKDFMKLAEMKELLN 281 (388)
T ss_pred CCCeEEEEeccCccHHHHHHHHHHhhc-CCcceEee--CcHHHHHHHHHHhCCCCEEEEcCCCCCccCHHHHHHHHHHHH
Confidence 34444 33444334555556555554 67766543 366677765522 35678999877543333334667766665
Q ss_pred hc----CCEEEEeCCC
Q 013210 214 DK----GVTVVVDNTF 225 (447)
Q Consensus 214 ~~----gi~livD~~~ 225 (447)
.. .+++++|.+.
T Consensus 282 ~~~~~~e~~LVlsat~ 297 (388)
T PRK12723 282 ACGRDAEFHLAVSSTT 297 (388)
T ss_pred hcCCCCeEEEEEcCCC
Confidence 42 5788889875
No 495
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=25.38 E-value=2.7e+02 Score=21.98 Aligned_cols=65 Identities=11% Similarity=0.127 Sum_probs=40.0
Q ss_pred hcCcccCeeEEEeCCC-CHHHHHHhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhc--CCEEEEeCCC
Q 013210 158 FFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK--GVTVVVDNTF 225 (447)
Q Consensus 158 ~~~~~~g~~~~~v~~~-d~~~l~~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~--gi~livD~~~ 225 (447)
.+.+ .|.++.++..+ ..+++.+.+...++++|.++...-. ....++.+.++.+++ ++.+++=..+
T Consensus 22 ~l~~-~G~~v~~l~~~~~~~~~~~~i~~~~pdiV~iS~~~~~--~~~~~~~~~~~~~~~p~~~~ivvGG~~ 89 (125)
T cd02065 22 ALRD-NGFEVIDLGVDVPPEEIVEAAKEEDADVVGLSALSTT--HMEAMKLVIEALKELGIDIPVVVGGAH 89 (125)
T ss_pred HHHH-CCCEEEEcCCCCCHHHHHHHHHHcCCCEEEEecchHh--HHHHHHHHHHHHHhcCCCCeEEEeCCc
Confidence 3444 78898887654 5566666664567778877543211 223456666666666 4787776654
No 496
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=25.30 E-value=1.7e+02 Score=26.57 Aligned_cols=33 Identities=21% Similarity=0.247 Sum_probs=27.3
Q ss_pred ceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEE
Q 013210 187 TKVLYFESISNPTLAVANIPELSRLAHDKGVTVV 220 (447)
Q Consensus 187 t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~li 220 (447)
+.+|+++- -|+.|.+.+.+++.++|++||+.++
T Consensus 168 P~avi~ei-~~~~G~~~~~~~~~~fA~~~~l~~v 200 (217)
T PRK03353 168 PAGVLCEL-TNDDGTMARAPECIAFAKQHNMPVL 200 (217)
T ss_pred ceEEEEEe-ecCCCCcccHHHHHHHHHHcCCcEE
Confidence 56666665 4577999999999999999999885
No 497
>TIGR00595 priA primosomal protein N'. All proteins in this family for which functions are known are components of the primosome which is involved in replication, repair, and recombination.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=24.95 E-value=1.9e+02 Score=30.09 Aligned_cols=50 Identities=16% Similarity=0.160 Sum_probs=26.6
Q ss_pred eCCh-HHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHhhcCcccCeeEEEe
Q 013210 120 TASG-MSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 170 (447)
Q Consensus 120 tsgg-t~A~~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v 170 (447)
|.|| |+....++..++..|..+++..|+-.-.......+... +|..+..+
T Consensus 6 TGsGKT~v~l~~i~~~l~~g~~vLvlvP~i~L~~Q~~~~l~~~-f~~~v~vl 56 (505)
T TIGR00595 6 TGSGKTEVYLQAIEKVLALGKSVLVLVPEIALTPQMIQRFKYR-FGSQVAVL 56 (505)
T ss_pred CCCCHHHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHHHHHH-hCCcEEEE
Confidence 4555 44444445445666878888888754444443333222 45455444
No 498
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=24.70 E-value=80 Score=29.35 Aligned_cols=26 Identities=19% Similarity=0.373 Sum_probs=18.9
Q ss_pred ccccCHHHHHHHHHhcCCEEEEeCCC
Q 013210 200 LAVANIPELSRLAHDKGVTVVVDNTF 225 (447)
Q Consensus 200 G~v~~l~~I~~la~~~gi~livD~~~ 225 (447)
|..-+.+++.++++++++-+|+|++|
T Consensus 50 G~lg~~~~l~~~l~~~~i~~vIDATH 75 (249)
T PF02571_consen 50 GRLGDEEGLAEFLRENGIDAVIDATH 75 (249)
T ss_pred CCCCCHHHHHHHHHhCCCcEEEECCC
Confidence 33346677777888888888888876
No 499
>PRK13937 phosphoheptose isomerase; Provisional
Probab=24.61 E-value=4.8e+02 Score=22.82 Aligned_cols=33 Identities=9% Similarity=0.115 Sum_probs=22.7
Q ss_pred cCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEE
Q 013210 184 QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVV 220 (447)
Q Consensus 184 ~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~li 220 (447)
+++.-+|.+.. .|...++-++++.|+++|+.+|
T Consensus 105 ~~~Dl~i~iS~----sG~t~~~~~~~~~ak~~g~~~I 137 (188)
T PRK13937 105 RPGDVLIGIST----SGNSPNVLAALEKARELGMKTI 137 (188)
T ss_pred CCCCEEEEEeC----CCCcHHHHHHHHHHHHCCCeEE
Confidence 44444555432 4666788899999999997665
No 500
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=24.52 E-value=1.5e+02 Score=28.82 Aligned_cols=71 Identities=15% Similarity=0.293 Sum_probs=47.4
Q ss_pred CCCchhHHHHHHhhcCcccCeeEEEeCCCCHHHHH---HhhccCCceEEEEEcCCCCCccccCHHHHHHHHHhcCCEEEE
Q 013210 145 RTLYGGTHALLTHFFPRACNITTTFVDISDHEMVN---SAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 221 (447)
Q Consensus 145 ~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~---~~i~~~~t~lV~i~~~~NptG~v~~l~~I~~la~~~gi~liv 221 (447)
.-.|+++-++++ . ..+++.++...++..-+ -++ .+-|-|++|-|-- -.+.+.++|.+.|+++| +++.
T Consensus 58 ~k~y~syEeLak----d-~~vDvVyi~~~~~qH~evv~l~l--~~~K~VL~EKPla--~n~~e~~~iveaA~~rg-v~~m 127 (351)
T KOG2741|consen 58 PKAYGSYEELAK----D-PEVDVVYISTPNPQHYEVVMLAL--NKGKHVLCEKPLA--MNVAEAEEIVEAAEARG-VFFM 127 (351)
T ss_pred CccccCHHHHhc----C-CCcCEEEeCCCCccHHHHHHHHH--HcCCcEEeccccc--CCHHHHHHHHHHHHHcC-cEEE
Confidence 344666655552 2 46788888776554333 233 2345588888752 34567899999999999 7788
Q ss_pred eCCC
Q 013210 222 DNTF 225 (447)
Q Consensus 222 D~~~ 225 (447)
|..+
T Consensus 128 eg~~ 131 (351)
T KOG2741|consen 128 EGLW 131 (351)
T ss_pred eeee
Confidence 8887
Done!