Query 013212
Match_columns 447
No_of_seqs 170 out of 1316
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 06:18:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013212.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013212hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_A Tubulin alpha chain; al 100.0 4E-123 1E-127 949.6 28.1 447 1-447 1-451 (451)
2 3ryc_B Tubulin beta chain; alp 100.0 7E-120 3E-124 924.0 26.3 430 1-438 1-432 (445)
3 3cb2_A Gamma-1-tubulin, tubuli 100.0 2E-109 6E-114 857.8 31.0 428 1-434 2-441 (475)
4 2btq_B Tubulin btubb; structur 100.0 2E-107 7E-112 836.2 24.5 420 1-431 1-425 (426)
5 2bto_A Tubulin btuba; bacteria 100.0 2E-106 7E-111 836.2 27.4 428 1-439 3-438 (473)
6 1w5f_A Cell division protein F 100.0 7.1E-43 2.4E-47 348.3 13.1 287 1-357 21-314 (353)
7 2vap_A FTSZ, cell division pro 100.0 9.7E-43 3.3E-47 347.9 13.5 283 3-357 39-327 (364)
8 2r75_1 Cell division protein F 100.0 3.8E-43 1.3E-47 349.2 9.8 296 3-377 9-311 (338)
9 1ofu_A FTSZ, cell division pro 100.0 6.4E-42 2.2E-46 338.3 13.7 295 3-375 13-313 (320)
10 1rq2_A Cell division protein F 100.0 5.8E-42 2E-46 343.9 10.7 297 2-376 12-313 (382)
11 2vaw_A FTSZ, cell division pro 100.0 1.9E-41 6.5E-46 341.5 13.9 298 2-376 12-314 (394)
12 2vxy_A FTSZ, cell division pro 100.0 2.2E-41 7.5E-46 339.8 13.8 286 2-357 12-302 (382)
13 3m89_A FTSZ/tubulin-related pr 100.0 4E-37 1.4E-41 307.9 11.1 283 4-329 45-361 (427)
14 4dxd_A Cell division protein F 100.0 1.9E-30 6.4E-35 257.8 11.6 267 3-333 19-290 (396)
15 3v3t_A Cell division GTPase FT 100.0 4E-30 1.4E-34 253.0 12.3 194 4-255 7-207 (360)
16 4ei7_A Plasmid replication pro 99.8 2.7E-18 9.1E-23 173.5 11.6 346 4-399 18-381 (389)
17 3r4v_A Putative uncharacterize 99.3 2.8E-12 9.7E-17 121.7 5.3 176 3-238 4-179 (315)
18 2e4h_B Tubulin alpha-ubiquitou 97.7 3E-05 1E-09 50.5 3.6 36 412-447 1-36 (36)
19 3bed_A PTS system, IIA compone 69.6 3.3 0.00011 35.0 3.4 30 111-141 45-74 (142)
20 1pdo_A Mannose permease; phosp 69.3 7.2 0.00025 32.4 5.5 31 111-141 41-71 (135)
21 3lfh_A Manxa, phosphotransfera 60.7 6 0.0002 33.5 3.4 32 111-142 43-75 (144)
22 3mtq_A Putative phosphoenolpyr 53.5 6.8 0.00023 33.8 2.5 31 112-142 61-91 (159)
23 3ipr_A PTS system, IIA compone 52.5 11 0.00036 32.1 3.6 32 111-142 41-72 (150)
24 3gx1_A LIN1832 protein; APC633 50.9 19 0.00063 29.8 4.7 39 110-150 43-81 (130)
25 2nx2_A Hypothetical protein YP 46.7 83 0.0028 27.4 8.6 112 111-238 25-138 (181)
26 3g7n_A Lipase; hydrolase fold, 41.7 19 0.00066 33.4 3.8 62 101-166 97-158 (258)
27 3b48_A Uncharacterized protein 41.5 6.6 0.00023 32.8 0.5 28 113-141 49-76 (135)
28 2wlt_A L-asparaginase; hydrola 41.4 50 0.0017 31.8 6.9 97 106-207 65-162 (332)
29 3ct6_A PTS-dependent dihydroxy 40.3 10 0.00035 31.5 1.5 27 113-141 44-70 (131)
30 1o7j_A L-asparaginase; atomic 39.3 50 0.0017 31.8 6.4 97 106-207 65-162 (327)
31 1wsa_A Asparaginase, asparagin 37.4 53 0.0018 31.6 6.3 97 106-207 63-160 (330)
32 3gdw_A Sigma-54 interaction do 37.1 33 0.0011 28.6 4.2 39 110-150 43-83 (139)
33 3uue_A LIP1, secretory lipase 35.8 29 0.00098 32.6 4.0 64 100-167 110-173 (279)
34 3f1i_H Hepatocyte growth facto 33.4 21 0.00072 27.8 2.1 53 374-431 30-91 (98)
35 3nxk_A Cytoplasmic L-asparagin 31.4 82 0.0028 30.4 6.5 96 106-207 69-165 (334)
36 2him_A L-asparaginase 1; hydro 30.7 98 0.0033 30.1 7.0 94 106-207 83-177 (358)
37 1nns_A L-asparaginase II; amid 30.5 80 0.0027 30.3 6.3 95 106-207 61-156 (326)
38 2aot_A HMT, histamine N-methyl 29.6 71 0.0024 29.4 5.7 59 112-171 34-92 (292)
39 1wls_A L-asparaginase; structu 29.0 70 0.0024 30.8 5.6 94 106-208 55-149 (328)
40 1zq1_A Glutamyl-tRNA(Gln) amid 27.4 1.2E+02 0.0039 30.5 7.0 91 106-204 149-240 (438)
41 2p10_A MLL9387 protein; putati 26.3 25 0.00087 33.2 1.8 34 111-152 13-46 (286)
42 2ful_A EIF-5, eukaryotic trans 25.6 34 0.0012 29.9 2.4 51 381-431 105-160 (177)
43 1agx_A Glutaminase-asparaginas 25.6 56 0.0019 31.5 4.2 97 106-207 62-159 (331)
44 2d6f_A Glutamyl-tRNA(Gln) amid 22.6 1.3E+02 0.0045 30.1 6.3 90 106-204 148-238 (435)
45 3o0d_A YALI0A20350P, triacylgl 21.2 44 0.0015 31.7 2.4 60 102-165 128-187 (301)
46 3kbq_A Protein TA0487; structu 20.2 1.1E+02 0.0039 26.4 4.7 41 108-155 46-86 (172)
No 1
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=100.00 E-value=3.9e-123 Score=949.61 Aligned_cols=447 Identities=84% Similarity=1.391 Sum_probs=418.5
Q ss_pred CeeEEEEecCcchhHHHHHHHHHHHHhhCCCCCCC----CCCCCCCccccccccccCCCccccceeeecCCCceeecccc
Q 013212 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQMPGD----TTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 76 (447)
Q Consensus 1 M~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~----~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~~~~ 76 (447)
|||||+||+||||||||.+||+++|+||+|+.++. .......+++++||+|+++|+|+|||||||+||++|++++.
T Consensus 1 mrEii~iqvGQcGnQIG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~~~fF~e~~~gk~vPRavlvDlEp~vid~v~~ 80 (451)
T 3ryc_A 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80 (451)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTSCCCCC-------CGGGGTEEECTTSCEEESEEEEESSSHHHHHHHH
T ss_pred CceEEEEeccCchhHHHHHHHHHHHhhcCCCCCCCcCCcccccccccchhhhcccCCCCccccceeeecCCcchhheeee
Confidence 99999999999999999999999999999985442 22112467899999999999999999999999999999999
Q ss_pred ccccccCCcceeecCCCCcCCCccccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhh
Q 013212 77 GTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 156 (447)
Q Consensus 77 ~~~~~~~~~~~~~~~~~g~gnn~a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~de 156 (447)
++++++|+|++++++++|+|||||+|||+.|+++.|+++|+||+++|+||.+|||+++||+|||||||+|+.|+|.|+++
T Consensus 81 g~~~~lf~p~~~i~gk~gAgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~e 160 (451)
T 3ryc_A 81 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD 160 (451)
T ss_dssp STTTTTSCGGGEEECSSCCTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHH
T ss_pred cccccccCHHHeeeccccccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhHHhhhhccCCCCCCCccchhHHHHHHhhhccc
Q 013212 157 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 236 (447)
Q Consensus 157 yp~~~~~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 236 (447)
||++.+++++|+|++..++++++|||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++|+++|+
T Consensus 161 y~kk~~~~~~v~P~~~~s~~vvepYNa~Lsl~~L~e~sD~~~~idNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~ 240 (451)
T 3ryc_A 161 YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240 (451)
T ss_dssp TTTCEEEEEEEECCTTTCCCTTHHHHHHHHHHHHGGGCSEEEEEEHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEEEEecCCCcccccceehHHHHHHHHHHhcccceeEeccHHHHHHHHHhccCCCCCchhhHHHHHhccccccc
Confidence 99999999999999878899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcccchhhhhhcCCCCccccccccccccccccccccccccCHHHHHHhhcCCCCCccccCCCCCcccceecccc
Q 013212 237 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 316 (447)
Q Consensus 237 ~~r~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~R 316 (447)
++||||++|.||.+|.+|||||||+||+.++|+|+++..+..++++++.+|++++|+++|||++|+|++|+|+++++++|
T Consensus 241 slRf~G~lN~Dl~~l~tnLVP~PrlHF~~~s~aPl~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~R 320 (451)
T 3ryc_A 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320 (451)
T ss_dssp HHHTTCSSSCSHHHHHHHHCSSSSCCCCEEEEECCCBSSSCCCCCCCHHHHHHHTTCGGGBSSCCCGGGSCEEEEEEEEE
T ss_pred ccccCcccccCHHHHhhccCCCCceeeeccccCccccccccccccCCHHHHHHHHhccccceEecCCCCCchheehhhcc
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHhhhccCccccccCCCCCCceeEeccCCCcCCCCCcccccceEEEeecCcchHHHHHHHHHHHHHhhc
Q 013212 317 GDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYA 396 (447)
Q Consensus 317 G~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~~~m~~ 396 (447)
|+++++++++++..+|.|+++.|++|+|++||+++|++||...|+.++++.++++|+|+|+|+|.+.|+++.++|++||+
T Consensus 321 G~v~~~dv~~~i~~ik~k~~~~Fv~W~p~~~kv~i~~~pP~~~p~~~la~~~~s~~~lsNsTaI~~~f~rl~~kFd~m~~ 400 (451)
T 3ryc_A 321 GDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 400 (451)
T ss_dssp ESCCHHHHHHHHHHHHHHCCCCBCTTSCEEEEEEEECSCCCCCTTSSBCCCSEEEEEEEEEGGGHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHhhcCCcceEEEccCceeeeeeccCCccCCCccccccceeeEEecCchHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceecccccccChhhHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCC
Q 013212 397 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGEDGDEGDEY 447 (447)
Q Consensus 397 rkAflh~Y~~~Gmee~eF~ea~~~l~~li~~Y~~~~~~~~~~~~~~~~~~~ 447 (447)
||||||||++|||||+||.||+++|.+|+++|++++.+..+++++||++||
T Consensus 401 krAFvHwY~~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~~~~~~~~~~ 451 (451)
T 3ryc_A 401 KRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY 451 (451)
T ss_dssp TTTTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCC-------------
T ss_pred cceeHhhhcCCccchhhHHHHHHHHHHHHHHHHHHhcCCCcccccccccCC
Confidence 999999999999999999999999999999999999887766666666664
No 2
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=100.00 E-value=7.4e-120 Score=924.01 Aligned_cols=430 Identities=42% Similarity=0.799 Sum_probs=412.1
Q ss_pred CeeEEEEecCcchhHHHHHHHHHHHHhhCCCCCCCCC--CCCCCccccccccccCCCccccceeeecCCCceeecccccc
Q 013212 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQMPGDTT--VGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGT 78 (447)
Q Consensus 1 M~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~--~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~~~~~~ 78 (447)
|||||+||+||||||||.+||+++|+||+++..+... .+...+++++||+|++.++|+|||||||+||++|++++.++
T Consensus 1 mrEii~i~vGQcGnQiG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRavlvDlEp~vid~i~~g~ 80 (445)
T 3ryc_B 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGP 80 (445)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSBBCCSCTHHHHTGGGTEEECSTTBEEECEEEEESSSHHHHHHHTST
T ss_pred CceEEEEecCCcHHHHHHHHHHHHHHHhCCCCCCCccCCccccccchhhccccCCCCccccceeEecCCchhhhhhhccc
Confidence 9999999999999999999999999999998544211 11234678999999999999999999999999999999999
Q ss_pred ccccCCcceeecCCCCcCCCccccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcC
Q 013212 79 YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYG 158 (447)
Q Consensus 79 ~~~~~~~~~~~~~~~g~gnn~a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp 158 (447)
++++|+|++++++++|+|||||+|||+.|+++.|+++|+||+++|+||.+|||+++||+|||||||+|+.|+|.|+++||
T Consensus 81 ~~~lf~p~~~i~g~~gAgNN~A~G~yt~G~e~~d~v~d~IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~ey~ 160 (445)
T 3ryc_B 81 FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP 160 (445)
T ss_dssp TGGGSCGGGEEECSSCCTTCHHHHHHSHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHCT
T ss_pred ccceecccceEEccccccCCccccchhhhHHHHHHHHHHHHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhHHhhhhccCCCCCCCccchhHHHHHHhhhccccc
Q 013212 159 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASL 238 (447)
Q Consensus 159 ~~~~~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~ 238 (447)
++.+++++|+|++..++++++|||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++|+++|+++
T Consensus 161 kk~~~~~sV~Psp~~s~~vvepYNa~Lsl~~L~e~sD~~~~iDNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~sl 240 (445)
T 3ryc_B 161 DRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240 (445)
T ss_dssp TSEEEEEEEECCGGGCSCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEeCCccccccccchhhhhhHhhhhcccceeEeecchhHHHHHHhccCCCCCcchhhHHHHHhcchhhcccc
Confidence 99999999999987789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccchhhhhhcCCCCccccccccccccccccccccccccCHHHHHHhhcCCCCCccccCCCCCcccceecccccc
Q 013212 239 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGD 318 (447)
Q Consensus 239 r~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~RG~ 318 (447)
||||++|+||.+|.+|||||||+||+.++|+|+++..+..++++++.+|++++|+++|+|++|+|++|+|+++++++||+
T Consensus 241 Rf~G~lN~Dl~~l~tnLVP~PrlhF~~~s~aP~~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~RG~ 320 (445)
T 3ryc_B 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVATIFRGR 320 (445)
T ss_dssp HSCCSSSCSHHHHHHHHCSSTTCCEEEEEEESCCCTTCCCCCCCCHHHHHHHTTSGGGBSSSCCGGGSCEEEEEEEEEES
T ss_pred ccCcccccCHHHHhhcccCCCceeeeccccCcccccchhhhccCCHHHHHHHHHhhcCCeeecCCCCCcceeeeeeeecC
Confidence 99999999999999999999999999999999999988889999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHhhhccCccccccCCCCCCceeEeccCCCcCCCCCcccccceEEEeecCcchHHHHHHHHHHHHHhhccc
Q 013212 319 VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKR 398 (447)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~~~m~~rk 398 (447)
++++++++++..++.|+++.|++|+|+++|+++|.+||... ++++|+|+|+|+|.+.|+++.+||++||+||
T Consensus 321 v~~kdv~~~i~~ik~k~~~~Fv~W~p~~~k~~i~~~pp~~~--------~~s~~~lsNsTaI~~~~~rl~~kFd~m~~kr 392 (445)
T 3ryc_B 321 MSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL--------KMSSTFIGNSTAIQELFKRISEQFTAMFRRK 392 (445)
T ss_dssp CCHHHHHHHHHHHHHHTGGGBCTTSTTCEEEEEESSCCTTC--------SEEEEEEEEEGGGHHHHHHHHHHHHHHHTTT
T ss_pred CChHHHHHHHHHHHhhCcccCcccCCCceeeeeeccCCccc--------ceeeeeecCcHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999999999999999998754 6899999999999999999999999999999
Q ss_pred cceecccccccChhhHHHHHHHHHHHHHHHHHHccCCCCC
Q 013212 399 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEG 438 (447)
Q Consensus 399 Aflh~Y~~~Gmee~eF~ea~~~l~~li~~Y~~~~~~~~~~ 438 (447)
||||||++|||||+||.||+++|++|+++|++++.+..+|
T Consensus 393 AFvHwY~~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~ 432 (445)
T 3ryc_B 393 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADE 432 (445)
T ss_dssp TTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHCCTTC
T ss_pred cchhhhhccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 9999999999999999999999999999999998776654
No 3
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=100.00 E-value=1.8e-109 Score=857.78 Aligned_cols=428 Identities=31% Similarity=0.596 Sum_probs=398.2
Q ss_pred CeeEEEEecCcchhHHHHHHHHHHHHhhCCCCCCCCC--CCCCCccccccccccCCCccccceeeecCCCceeecccccc
Q 013212 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQMPGDTT--VGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGT 78 (447)
Q Consensus 1 M~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~--~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~~~~~~ 78 (447)
|||||+||+||||||||++||++++.||+++..+... ......++++||+|+++++|+||||+||+||++|+.++.++
T Consensus 2 ~rEiItiqvGQ~GnqIG~~fWe~~~~Ehgi~~~g~~~~~~~~~~~~~~vfF~e~~~~~yvPRavlvDLEp~vid~i~~~~ 81 (475)
T 3cb2_A 2 PREIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSP 81 (475)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSCBCTTCCTTSSCGGGTEEECTTSCEEECEEEEESSSHHHHHHHHST
T ss_pred CccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCCcCcccccccccceeeeecCCCceecceeEecCCcceeeeecccc
Confidence 7999999999999999999999999999998543211 11235688999999999999999999999999999999999
Q ss_pred ccccCCcceeecCCC--CcCCCccccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhh
Q 013212 79 YRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 156 (447)
Q Consensus 79 ~~~~~~~~~~~~~~~--g~gnn~a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~de 156 (447)
++.+|+|++++.+++ |+||||+.|| ..|++..|+++|+||+++|+||.+|||+|+||+|||||||+|+.|+|.|+|+
T Consensus 82 ~~~lf~p~~~i~g~~g~gAgnn~a~G~-~~g~e~~d~~~d~Ir~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~de 160 (475)
T 3cb2_A 82 YAKLYNPENIYLSEHGGGAGNNWASGF-SQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDR 160 (475)
T ss_dssp TTTTSCGGGEEECCTTCCCTTCHHHHH-HHHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHHHH
T ss_pred ccccCCccceeecccccCCCCCchhhh-hhhHhhHHHHHHHHHHHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHHHH
Confidence 999999999999987 7999999995 7899999999999999999999999999999999999999999999999999
Q ss_pred cCCcceeEEEEecCCC-CCCccchhhHHHHHHHHhhccCCeeeeecchhHHhhhhccCCCCCCCccchhHHHHHHhhhcc
Q 013212 157 YGKKSKLGFTVYPSPQ-VSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 235 (447)
Q Consensus 157 yp~~~~~~~~v~P~~~-~~~~~~~~yN~~lsl~~l~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t 235 (447)
||++.+++++|+|++. .+++++++||++|++++|.+++|++|++||++|+++|.+.+++..++|.++|++||++|+++|
T Consensus 161 y~~k~~lt~~V~P~~~e~se~vv~~yNa~lsl~~L~e~sD~~i~idNeaL~~i~~~~l~i~~p~f~~~N~lia~~vs~iT 240 (475)
T 3cb2_A 161 YPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAST 240 (475)
T ss_dssp STTSEEEEEEEECCTTSCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHT
T ss_pred cCCCceEEEEEECCccccccceeehhHhHHHHHHHHhhCCEEEEeccHHHHHHHhhcCCCCcchHHHHHHHHhhhccccc
Confidence 9999999999999974 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcccchhhhhhcCCCCcccccccccccccccccc-ccccccCHHHHHHhhcCCCCCccccCCC---CCcccce
Q 013212 236 ASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEK-AFHEQLSVAEITNSAFEPSSMMAKCDPR---HGKYMAC 311 (447)
Q Consensus 236 ~~~r~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~ls~ 311 (447)
.++||||.+|.|+.++.++||||||+||+.++++|+++..+ ..++++++.++++++|+++|+|++|+|+ .|+|+|+
T Consensus 241 ~~lr~pG~lN~Dl~d~~tnLvP~PrlhFl~~s~aP~~s~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~~~~gkyla~ 320 (475)
T 3cb2_A 241 TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAI 320 (475)
T ss_dssp TTTSSSSCTTCSHHHHHHHHCSSTTCCEEEEEEECCC------CCSCCCHHHHHHHTTSGGGBSSCCCCC--CCCCEEEE
T ss_pred cccccCCcccchhhhhcceeecccceeEeecccccccccccccccccCCHHHHHHHHhccccceEecCcccccccchhhh
Confidence 99999999999999999999999999999999999999877 7789999999999999999999999999 9999999
Q ss_pred eccccccCChhhHHHHHHhhhccCccccccCCCCCCceeEeccCCCcCCCCCcccccceEEEeecCcchHHHHHHHHHHH
Q 013212 312 CLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKF 391 (447)
Q Consensus 312 ~~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~ 391 (447)
++++||++.++++.+++..++.|++..|++|+|+++|+++|++||...++. +.++|+|+|+|+|.+.|+++.+||
T Consensus 321 ~~~~RG~v~~~dv~~~i~~ik~k~~~~fv~W~p~~~k~~i~~~~p~~~~~~-----~~s~~~lsN~TaI~~~f~ri~~kf 395 (475)
T 3cb2_A 321 LNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAH-----RVSGLMMANHTSISSLFERTCRQY 395 (475)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCSCBCTTSCCCEEEEEECCCCC----------CCEEEEEEEEGGGHHHHHHHHHHH
T ss_pred HHhhcCCCCHHHHHHHHHHhhcccCCccceecCCCceeeeeccCCccCCCc-----ceEEEEecCChHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999866532 578999999999999999999999
Q ss_pred HHhhccccceecccccccCh---hhHHHHHHHHHHHHHHHHHHccC
Q 013212 392 DLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAALEKDYEEVGAE 434 (447)
Q Consensus 392 ~~m~~rkAflh~Y~~~Gmee---~eF~ea~~~l~~li~~Y~~~~~~ 434 (447)
++||+||||||||++||||| +||.||+++|++|+++|++++.+
T Consensus 396 d~m~~rrAflHwY~~eGm~e~~~~eF~EA~~~l~~li~eY~~~~~~ 441 (475)
T 3cb2_A 396 DKLRKREAFLEQFRKEDMFKDNFDEMDTSREIVQQLIDEYHAATRP 441 (475)
T ss_dssp HHHHHTTCSCHHHHTSGGGSSCCHHHHHHHHHHHHHHHHHHHTTSG
T ss_pred HHHhhcccceeeecccCccccchhHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999987 99999999999999999997643
No 4
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=100.00 E-value=2e-107 Score=836.23 Aligned_cols=420 Identities=39% Similarity=0.714 Sum_probs=372.7
Q ss_pred CeeEEEEecCcchhHHHHHHHHHHHHhhCCCCCCCCCC---CCCCccccccccccCCCccccceeeecCCCceeeccccc
Q 013212 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQMPGDTTV---GGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG 77 (447)
Q Consensus 1 M~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~---~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~~~~~ 77 (447)
|||||+||+||||||||++||++++.||+++..+.... ....+++++||+|+.+++|+||||+||+||++++.++.+
T Consensus 1 MrEii~iq~GQ~GnqIg~~fW~~~~~ehgi~~~g~~~~~~~~~~~~~~~~fF~e~~~~~yvPRav~vDle~~~l~~i~~~ 80 (426)
T 2btq_B 1 VREILSIHVGQCGNQIADSFWRLALREHGLTEAGTLKEGSNAAANSNMEVFFHKVRDGKYVPRAVLVDLEPGVIARIEGG 80 (426)
T ss_dssp -CEEEEEEEHHHHHHHHHHHHHHHHHHHTBCTTSBBCC-------CCCTTTEEEEETTEEEECEEEEEECC---------
T ss_pred CCcEEEEecCCcHhHHHHHHHHHHHHHcCCCCCCCccCcccccccccccceeeecCCCceeeeeEEEecCcccccccccc
Confidence 99999999999999999999999999999985432111 123467999999999999999999999999999999999
Q ss_pred cccccCCcceeecCCCCcCCCccccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhc
Q 013212 78 TYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDY 157 (447)
Q Consensus 78 ~~~~~~~~~~~~~~~~g~gnn~a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~dey 157 (447)
+++.+|+|++++.+++|+||||++|||..|+++.|+++|+||+++|+||.+|||+++||+|||||||+|+.|++.|+|+|
T Consensus 81 ~~~~lf~p~~i~~g~~gAgnn~a~G~~~~G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~y 160 (426)
T 2btq_B 81 DMSQLFDESSIVRKIPGAANNWARGYNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAY 160 (426)
T ss_dssp ---CCCCTTSEEECCSCCTTCHHHHHTHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTTC
T ss_pred ccccccCcccccccccCccCcccccccchhHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhHHhhhhccCCCCCCCccchhHHHHHHhhhcccc
Q 013212 158 GKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTAS 237 (447)
Q Consensus 158 p~~~~~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~ 237 (447)
|++.+++++|+|.+..+++++++||+++++++|.+++|++|++||++|+++|.+.++ ..++|.++|++||++|+++|.+
T Consensus 161 ~~~~~lt~~V~p~p~~~e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~i~~~~l~-~~~~f~~~N~lia~~v~~it~~ 239 (426)
T 2btq_B 161 PKKRIFTFSVVPSPLISDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLN-RSPNYMDLNNIIALIVSSVTAS 239 (426)
T ss_dssp TTSEEEEEEEECCGGGCCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSS-SCCCHHHHHHHHHHHHHHHHHH
T ss_pred CcCceEEEEEecCCccccchhhHHHHHHHHHHHHHhCCcceeeccHHHHHHHhccCC-CCcHHHHHHHHHHhhhcchhhh
Confidence 999999999999987789999999999999999999999999999999999999988 8899999999999999999999
Q ss_pred ccCCCCcccchhhhhhcCCCCccccccccccccccccccccccccCHHHHHHhhcCCCCCccccCCCCCcccceeccccc
Q 013212 238 LRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRG 317 (447)
Q Consensus 238 ~r~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~RG 317 (447)
+||||.+|.|+.++.++|+|||++||++++++|+++..+..+++.++.++++++|+++|+|++|+|+.++|+++++++||
T Consensus 240 lr~~g~lN~D~~d~~t~lvP~P~~hf~~~~~aP~~~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~g~yla~~~i~rG 319 (426)
T 2btq_B 240 LRFPGKLNTDLSEFVTNLVPFPGNHFLTASFAPMRGAGQEGQVRTNFPDLARETFAQDNFTAAIDWQQGVYLAASALFRG 319 (426)
T ss_dssp HHSSCSSSCSHHHHHHHHCSSTTCCEEEEECSCC-----------CCHHHHHHHTCGGGBSSCCCTTTCCEEEEEEEEEC
T ss_pred ccCCCcccCCHHHHHHHHhhCCCCceeeccccccccchhhccccCCHHHHhhhhcCccceeEecCCCCchHHHHHHHHcC
Confidence 99999999999999999999999999999999999988888899999999999999999999999999999999999999
Q ss_pred cCChhhHHHHHHhhhccCccccccCCC--CCCceeEeccCCCcCCCCCcccccceEEEeecCcchHHHHHHHHHHHHHhh
Q 013212 318 DVVPKDVNAAVATIKTKRTIQFVDWCP--TGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY 395 (447)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~f~~w~p--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~~~m~ 395 (447)
++.++++++.+..+ |++..|++|+| +++|+++|++||... +.++|+|+|+|+|.+.|+++.++|++||
T Consensus 320 ~v~~~~v~~~~~~i--k~~~~fv~W~p~~~~~k~~i~~~~p~~~--------~~s~~~lsNstaI~~~~~~~~~~f~~m~ 389 (426)
T 2btq_B 320 DVKAKDVDENMATI--RKSLNYASYMPASGGLKLGYAETAPEGF--------ASSGLALVNHTGIAAVFERLIAQFDIMF 389 (426)
T ss_dssp C----CTTTTHHHH--HTTSCBCTTSCSSCSEEEEEESCCCTTC--------SSBCCEEEEEGGGHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH--hcCCCCcccCCCCCceeeeeeccCCCCC--------cceeEEecCChHHHHHHHHHHHHHHHHh
Confidence 99999999888777 67889999999 999999999998643 5689999999999999999999999999
Q ss_pred ccccceecccccccChhhHHHHHHHHHHHHHHHHHH
Q 013212 396 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 431 (447)
Q Consensus 396 ~rkAflh~Y~~~Gmee~eF~ea~~~l~~li~~Y~~~ 431 (447)
+||||||||++|||||+||.||+++|++|+++|+++
T Consensus 390 ~rrAflh~Y~~eGmee~eF~ea~~~l~~l~~eY~~~ 425 (426)
T 2btq_B 390 DNHAYTHWYENAGVSRDMMAKARNQIATLAQSYRDA 425 (426)
T ss_dssp HTTSSHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccchhhhccCCccHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999986
No 5
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=100.00 E-value=2.1e-106 Score=836.24 Aligned_cols=428 Identities=39% Similarity=0.745 Sum_probs=386.5
Q ss_pred CeeEEEEecCcchhHHHHHHHHHHHHhhCCCCC-CCCCCC-CCCcccccccc---ccCCCccccceeeecCCCceeeccc
Q 013212 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQMP-GDTTVG-GGDDAFNTFFS---ETGAGKHVPRAVFVDLEPTVIDEVR 75 (447)
Q Consensus 1 M~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~-~~~~~~-~~~~~~~~~f~---e~~~~~~~pR~llvD~e~~~i~~~~ 75 (447)
|||||+||+||||||||.+||+++|+||+++.. +....+ ...+++++||+ |+++++|+||||+||+||++++.++
T Consensus 3 mrEii~iqvGQcGnqIG~~~We~~~~Ehgi~~~~g~~~~~~~~~~~~~~fF~~~~e~~~~~~vpRav~vDlep~vi~~i~ 82 (473)
T 2bto_A 3 VNNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVAPRGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVIDNVK 82 (473)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTTCCCSSSCCCSSSGGGTEEECSCC--CCEEECEEEEESSSHHHHHHH
T ss_pred cccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCeecCCCcccccccceecccccccCCceeeeeeEecCcchhhhhhh
Confidence 999999999999999999999999999999855 321110 01567899999 9999999999999999999999999
Q ss_pred cccccccCCcceeecCCCCcCCCccccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhh
Q 013212 76 TGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 155 (447)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~g~gnn~a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~d 155 (447)
.++ +.+|+|++++++++|+||||++|||..|+++.|+++|.||+++|+||.+|||+|+||+|||||||+|+.|+|.|+|
T Consensus 83 ~~~-~~lf~p~~~it~~~GAgnn~a~G~~~~G~~~~ee~~d~Ir~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~l~e 161 (473)
T 2bto_A 83 ATS-GSLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKE 161 (473)
T ss_dssp HHS-TTCSCGGGEEECSSCCTTCHHHHHTSHHHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHHH
T ss_pred ccc-cccccccceEecccCCCCCcCCCcchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHHHHH
Confidence 888 8899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhHHhhhhccCCCCCCCccchhHHHHHHhhhcc
Q 013212 156 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 235 (447)
Q Consensus 156 eyp~~~~~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t 235 (447)
+||++.+++++|+|++..+++++++||++|++++|.+++|++|++||++|+++|.+.+++..++|.++|++||+.|+++|
T Consensus 162 ~y~~~~ilt~~V~P~~~~~e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~i~~~~l~i~~~~f~~~N~lia~~v~~it 241 (473)
T 2bto_A 162 KYGEIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALAGIT 241 (473)
T ss_dssp HTCSSCEEEEEEECCCCSSCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHH
T ss_pred HcCCCceEEEEEecCCccccchhhHHHHHHHHHHHHhhCCeEEEeccHHHHHHhccccccCcchHHHHHHHHhhhcccch
Confidence 99999999999999987789999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcccc--hhhhhhcCCCCccccccccccccccccccccccccCHHHHHHhhcCCCCCccccCCCCCcccceec
Q 013212 236 ASLRFDGALNVD--VTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCL 313 (447)
Q Consensus 236 ~~~r~~~~~n~~--l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~ 313 (447)
.++||||.+|.| +.++.++|||||++||++++++|+++.....++..++.++++++|+++|+|++|+|+.++|+++++
T Consensus 242 ~~lr~~g~lN~D~~l~d~~t~LvP~Prlhf~~~~~aPl~s~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~gkyla~~~ 321 (473)
T 2bto_A 242 ASMRFSGFLTVEISLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAACSPMEGRFLSTAV 321 (473)
T ss_dssp HHHHC------CCCHHHHHHHHCSSTTCCEEEEEEECCCCCC-----CCCHHHHHHHHTSGGGBSSSSCGGGSCEEEEEE
T ss_pred hhcccCCcccCCccHHhhhhheeecCCcceeeeccccccccchhccccCCHHHHHhhhcccccceeecCCCCchHHHHHH
Confidence 999999999999 999999999999999999999999998888889999999999999999999999999999999999
Q ss_pred cccccCChhhH-HHHHHhhhccCccccccCCCCCCceeEeccCCCcCCCCCcccccceEEEeecCcchHHHHHHHHHHHH
Q 013212 314 MYRGDVVPKDV-NAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFD 392 (447)
Q Consensus 314 ~~RG~~~~~~~-~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~~ 392 (447)
++||++.++++ .+.+..++.+++..| |+|+++|+++|.+||... +.++++|+|+|+|.+.|+++.++|+
T Consensus 322 i~RG~v~~~dv~~~~i~~ik~k~~~~F--W~p~~~kv~i~~~pp~g~--------~~s~~~lsNsTaI~~~~~~l~~kf~ 391 (473)
T 2bto_A 322 LYRGIMEDKPLADAALAAMREKLPLTY--WIPTAFKIGYVEQPGISH--------RKSMVLLANNTEIARVLDRICHNFD 391 (473)
T ss_dssp EEEEC----CCHHHHHHHHHTTSCBCS--SSCCCEEEEEESSCCSSC--------SEEEEEEEEETTHHHHHHHHHHHHH
T ss_pred hhcCCCChHHhhHHHHHHHHhhcccce--ecCCcceecccccCCcCc--------ceeEEEecCCchHHHHHHHHHHHHH
Confidence 99999999999 999999998888999 999999999999998742 6799999999999999999999999
Q ss_pred HhhccccceecccccccChhhHHHHHHHHHHHHHHHHHHccCCCCCC
Q 013212 393 LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGE 439 (447)
Q Consensus 393 ~m~~rkAflh~Y~~~Gmee~eF~ea~~~l~~li~~Y~~~~~~~~~~~ 439 (447)
+||+||||||||+++||||+||.||+++|++|+++|++++.+..+++
T Consensus 392 ~m~~rrAflH~Y~~eGmee~eF~EA~e~l~~l~~eY~~~~~~~~~~~ 438 (473)
T 2bto_A 392 KLWQRKAFANWYLNEGMSEEQINVLRASAQELVQSYQVAEESGAKAK 438 (473)
T ss_dssp HHHTTTTTHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTC------
T ss_pred HHhhhcchhHHhhccCCcHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 99999999999999999999999999999999999999976544443
No 6
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=7.1e-43 Score=348.27 Aligned_cols=287 Identities=14% Similarity=0.219 Sum_probs=241.4
Q ss_pred CeeEEEEecCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCccccccccccCCCccccceeeecCCCceeecccccccc
Q 013212 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYR 80 (447)
Q Consensus 1 M~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~~~~~~~~ 80 (447)
|++|++|++|||||+++.++|+. ++. + ++.+.+|++...++.+.
T Consensus 21 ~~~I~vIGvGg~G~n~vn~m~~~-----gi~-----------------------g---v~~ia~nTD~q~L~~~~----- 64 (353)
T 1w5f_A 21 NLKIKVIGVGGAGNNAINRMIEI-----GIH-----------------------G---VEFVAVNTDLQVLEASN----- 64 (353)
T ss_dssp -CCEEEEEEHHHHHHHHHHHHHH-----CCT-----------------------T---EEEEEEESCHHHHHTCC-----
T ss_pred CCEEEEECcCchHHHHHHHHHHh-----CCC-----------------------C---CCEEEEcCCHHHHhcCC-----
Confidence 57899999999999999999983 321 1 47789999888765543
Q ss_pred ccCCcceeecCC-----CCcCCCccccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhh
Q 013212 81 QLFHPEQLISGK-----EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 155 (447)
Q Consensus 81 ~~~~~~~~~~~~-----~g~gnn~a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~d 155 (447)
-|+.+..++ .|+||||+. |+++.++..|.||+.+|.|| +|+++||+|||||||+++.|++.+++
T Consensus 65 ---a~~~i~iG~~~t~G~GAG~n~~~-----G~~~aee~~d~I~~~le~~d---~~~i~as~GGGTGSG~ap~la~~~ke 133 (353)
T 1w5f_A 65 ---ADVKIQIGENITRGLGAGGRPEI-----GEQAALESEEKIREVLQDTH---MVFITAGFGGGTGTGASPVIAKIAKE 133 (353)
T ss_dssp ---CSEEEECCTTTTTTSCCTTCHHH-----HHHHHHHTHHHHHHHTTTCS---EEEEEEETTSSHHHHHHHHHHHHHHH
T ss_pred ---CCcEEEccCcccCCCCCCCChHH-----HHHHHHHHHHHHHHHHccCC---EEEEEeccCCCccccHHHHHHHHHHH
Confidence 245555544 499999984 57899999999999999998 58999999999999999999999987
Q ss_pred hcCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhHHhhhhccCCCCCCCccchhHHHHHHhhhcc
Q 013212 156 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 235 (447)
Q Consensus 156 eyp~~~~~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t 235 (447)
|+ +++++|+|.+...|..+++||+.+++++|.+++|.+|++||++|+++|.+.+.+. ++|..+|++|++.++++|
T Consensus 134 -~g---~lt~~Vvt~Pf~~Eg~~~~~nA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~v~~it 208 (353)
T 1w5f_A 134 -MG---ILTVAIVTTPFYFEGPERLKKAIEGLKKLRKHVDTLIKISNNKLMEELPRDVKIK-DAFLKADETLHQGVKGIS 208 (353)
T ss_dssp -TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHTTSCTTCCHH-HHHHHHHHHHHHHHHHHH
T ss_pred -hC---CcEEEEEeCCcccccchhHHHHHHHHHHHHhhCCEEEEEecHHHHhhhcccCCHH-HHHHHHHHHHHHHhcCch
Confidence 54 5666666555556889999999999999999999999999999999998888876 589999999999999999
Q ss_pred ccccCCCCccc--chhhhhhcCCCCccccccccccccccccccccccccCHHHHHHhhcCCCCCccccCCCCCcccceec
Q 013212 236 ASLRFDGALNV--DVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCL 313 (447)
Q Consensus 236 ~~~r~~~~~n~--~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~ 313 (447)
.++||||.+|. |+.++.++|+| |+++|+..+.+.- ..+..+++++.+ +++++.++++.++++.+++
T Consensus 209 ~~ir~pG~iNv~~D~~dv~t~L~~-~g~a~~g~g~a~g---------~~~v~ea~~~a~--~~~ll~~d~~~ak~~l~~i 276 (353)
T 1w5f_A 209 ELITKRGYIRLTSRFARIESVMKD-AGAAILGIGVGKG---------EHRAREAAKKAM--ESKLIEHPVENASSIVFNI 276 (353)
T ss_dssp HHHHCCCCCCHHHHHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHH--TCTTCCSCGGGCSEEEEEE
T ss_pred hhccCCcccccccCHHHHHHhccC-CCeeEEEEeecCC---------cchHHHHHHHHH--hCCCcCCChhhcceeEEEE
Confidence 99999999999 99999999999 9999888766421 135778888888 4667779999999999999
Q ss_pred cccccCChhhHHHHHHhhhccCccccccCCCCCCceeEeccCCC
Q 013212 314 MYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPT 357 (447)
Q Consensus 314 ~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~ 357 (447)
..||++++.++++.+..++.+... |..++++.+..++.
T Consensus 277 ~~~~dl~~~ev~~a~~~I~~~~~~------~~~i~~G~~~d~~~ 314 (353)
T 1w5f_A 277 TAPSNIRMEEVHEAAMIIRQNSSE------DADVKFGLIFDDEV 314 (353)
T ss_dssp EECTTCCHHHHHHHHHHHHTTSCT------TSEEEEEEEECTTS
T ss_pred EeCCCCCHHHHHHHHHHHHHhhCC------CCcEEEEEEeCCCC
Confidence 999999999999999888765321 56788888877654
No 7
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=100.00 E-value=9.7e-43 Score=347.91 Aligned_cols=283 Identities=18% Similarity=0.261 Sum_probs=238.9
Q ss_pred eEEEEecCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCccccccccccCCCccccceeeecCCCceeecccccccccc
Q 013212 3 ECISVHIGQAGIQVGNACWELYCLEHGIQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQL 82 (447)
Q Consensus 3 Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~~~~~~~~~~ 82 (447)
+|++|++|||||+++.+||+. ++. + -..+.+|++...++.+.
T Consensus 39 ~I~vIGvGg~G~n~v~~m~~~-----gi~-----------------------g---v~fia~NTD~q~L~~~~------- 80 (364)
T 2vap_A 39 KITVVGCGGAGNNTITRLKME-----GIE-----------------------G---AKTVAINTDAQQLIRTK------- 80 (364)
T ss_dssp CEEEEEEHHHHHHHHHHHHHH-----TCT-----------------------T---EEEEEEESBHHHHHTSC-------
T ss_pred eEEEEeeCchHHHHHHHHHHh-----CCC-----------------------C---CCEEEEcCcHHHHhcCC-------
Confidence 699999999999999999985 221 1 13578888777655443
Q ss_pred CCcceeecC-----CCCcCCCccccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhc
Q 013212 83 FHPEQLISG-----KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDY 157 (447)
Q Consensus 83 ~~~~~~~~~-----~~g~gnn~a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~dey 157 (447)
.|+.+..+ ..|+||||+.| +++.++.+|.||+.+|.||.+ +++||+|||||||+++.|++.+++ |
T Consensus 81 -a~~ki~iG~~~t~G~GAGnn~a~G-----~~~~ee~~d~Ir~~le~~D~l---~i~as~GGGTGSG~ap~lae~lke-~ 150 (364)
T 2vap_A 81 -ADKKILIGKKLTRGLGAGGNPKIG-----EEAAKESAEEIKAAIQDSDMV---FITCGLGGGTGTGSAPVVAEISKK-I 150 (364)
T ss_dssp -CSEEEECCTTTTTTBCCTTCHHHH-----HHHHHHTHHHHHHHHTTCSEE---EEEEETTSSHHHHHHHHHHHHHHH-T
T ss_pred -CCcEEEeccccccCCCCCCChHHH-----HHHHHHHHHHHHHHHhcCCEE---EEeccCCCCCCCChHHHHHHHHHH-h
Confidence 24445444 35999999976 789999999999999999977 999999999999999999999998 7
Q ss_pred CCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhHHhhhhccCCCCCCCccchhHHHHHHhhhcccc
Q 013212 158 GKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTAS 237 (447)
Q Consensus 158 p~~~~~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~ 237 (447)
.+++++|+|.+...+.++++||+++++++|.+++|.+|++||++|+++|. .+.+ .++|.++|++|++.++++|.+
T Consensus 151 ---~~lt~~Vv~~Pf~~eg~~~~ynA~~~l~~L~e~~D~~ividNeaL~~i~~-~l~i-~~af~~~N~li~~~v~~it~~ 225 (364)
T 2vap_A 151 ---GALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVP-NMPL-KLAFKVADEVLINAVKGLVEL 225 (364)
T ss_dssp ---TCEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEGGGHHHHST-TCCH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCcEEEEeCCCccccchhHHHHHHHHHHHHHHhCCeEEEEcHHHHHHHHc-cCCh-hhhhhhHHHHHHHHHhhhhHH
Confidence 35666666665556889999999999999999999999999999999998 7777 789999999999999999999
Q ss_pred ccCCCCcccchhhhhhcCCCCccccccccccccccccccccccccCHHHHHHhhcCCCCCccccCCCCCcccceeccccc
Q 013212 238 LRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRG 317 (447)
Q Consensus 238 ~r~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~RG 317 (447)
+||||.+|.|+.++.++|+| |++||+..++++- .....+++++.+ +++++.++++.++++.+++..||
T Consensus 226 ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~--~~~ll~~d~~~ak~~l~~i~~~~ 293 (364)
T 2vap_A 226 ITKDGLINVDFADVKAVMNN-GGLAMIGIGESDS---------EKRAKEAVSMAL--NSPLLDVDIDGATGALIHVMGPE 293 (364)
T ss_dssp HHSCCSBCCCHHHHHHHHTT-CEEEEEEEEEECS---------TTHHHHHHHHHH--TCTTCCSCGGGCCEEEEEEEECT
T ss_pred hhcCCceeccHHHHHHhccC-CCeeEEEEEecCC---------cchHHHHHHHHH--hCcCcCcChhhcceEEEEEEeCC
Confidence 99999999999999999999 9999998876532 124778888888 46788899999999999999999
Q ss_pred cCChhhHHHHHHhhhccCccccccCCC-CCCceeEeccCCC
Q 013212 318 DVVPKDVNAAVATIKTKRTIQFVDWCP-TGFKCGINYQPPT 357 (447)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~f~~w~p-~~~~~~~~~~~~~ 357 (447)
++++.++++.+..++.+.. | .+++++.|..++.
T Consensus 294 dl~~~ev~~a~~~I~~~~~-------~~a~ii~G~~~~~~~ 327 (364)
T 2vap_A 294 DLTLEEAREVVATVSSRLD-------PNATIIWGATIDENL 327 (364)
T ss_dssp TCCHHHHHHHHHHHHHHSC-------TTCEEEEEEEECTTC
T ss_pred CCCHHHHHHHHHHHHHhcC-------CCCCEEEEEEecCCC
Confidence 9999999999988876542 3 4577788877665
No 8
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=100.00 E-value=3.8e-43 Score=349.24 Aligned_cols=296 Identities=16% Similarity=0.254 Sum_probs=251.6
Q ss_pred eEEEEecCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCccccccccccCCCccccceeeecCCCceeecccccccccc
Q 013212 3 ECISVHIGQAGIQVGNACWELYCLEHGIQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQL 82 (447)
Q Consensus 3 Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~~~~~~~~~~ 82 (447)
.|..|++|++|+++..++|+. ++ +| ++.|++|+|...++.+..
T Consensus 9 ~I~viGvGg~G~n~vn~m~~~-----~~-----------------------~g---v~~ia~NTD~q~L~~~~a------ 51 (338)
T 2r75_1 9 KIKVIGVGGGGSNAVNRMYED-----GI-----------------------EG---VELYAINTDVQHLSTLKV------ 51 (338)
T ss_dssp CEEEEEEHHHHHHHHHHHHHT-----TC-----------------------CS---CEEEEEESBHHHHHTCCC------
T ss_pred eEEEEeeCccHHHHHHHHHHh-----CC-----------------------CC---ceEEEEECCHHHHhcCCC------
Confidence 488999999999999999973 11 12 688999999998765532
Q ss_pred CCcceeecC-----CCCcCCCccccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhc
Q 013212 83 FHPEQLISG-----KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDY 157 (447)
Q Consensus 83 ~~~~~~~~~-----~~g~gnn~a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~dey 157 (447)
|+.++.+ ..|+||||+.| +++.++.+|.||+++|.||.+ +++||+|||||||+++. ++.++++|
T Consensus 52 --~~ki~iG~~~t~g~GAGnn~a~G-----~~~~ee~~d~Ir~~~e~~D~l---~i~~s~GGGTGSG~~~~-ia~l~~e~ 120 (338)
T 2r75_1 52 --PNKIQIGEKVTRGLGAGAKPEVG-----EEAALEDIDKIKEILRDTDMV---FISAGLGGGTGTGAAPV-IAKTAKEM 120 (338)
T ss_dssp --SEEEECCHHHHTTBCCTTCHHHH-----HHHHHHTHHHHHHHHSSCSEE---EEEEETTSSHHHHHHHH-HHHHHHHT
T ss_pred --CcEEEecCcccCCCCCCCChHHH-----HHHHHHHHHHHHHHHccCCee---EEecccCCCcCCCchHH-HHHHHHhc
Confidence 4445444 47999999954 799999999999999999987 99999999999999999 67788888
Q ss_pred CCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhHHhhhhccCCCCCCCccchhHHHHHHhhhcccc
Q 013212 158 GKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTAS 237 (447)
Q Consensus 158 p~~~~~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~ 237 (447)
| +++++|+|.+...|.++++||+++++++|.+++|.+|++||++|+++|.+.+.+. ++|.++|++|++.++++|.+
T Consensus 121 g---~lt~~Vv~~P~~~eg~~~~ynA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~N~~i~~~v~~it~~ 196 (338)
T 2r75_1 121 G---ILTVAVATLPFRFEGPRKMEKALKGLEKLKESSDAYIVIHNDKIKELSNRTLTIK-DAFKEVDSVLSKAVRGITSI 196 (338)
T ss_dssp T---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHHTSCCCSSHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred C---CCEEEEeCCCccccchhhHHHHHHHHHHHHhcCCeEEEeccHHHHhhhhccCChH-HHHHHHHHHHHHHHhhhhhh
Confidence 6 6778888777667999999999999999999999999999999999999888887 79999999999999999999
Q ss_pred ccCCCCcccchhhhhhcCCCCccccccccccccccccccccccccCHHHHHHhhcCCCCCccccCCCCCcccceeccccc
Q 013212 238 LRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRG 317 (447)
Q Consensus 238 ~r~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~RG 317 (447)
+||||.+|.|+.++.++|+|+ +++|+..+++|- ...........++..+|+ .|++..+++ +++++||
T Consensus 197 ir~pG~iNvD~~dv~t~L~~~-g~a~~g~g~a~g----~~r~~~a~~~ai~s~lle-~n~~~~a~~-------~l~~i~G 263 (338)
T 2r75_1 197 VVTPAVINVDFADVRTTLEEG-GLSIIGMGEGRG----DEKADIAVEKAVTSPLLE-GNTIEGARR-------LLVTIWT 263 (338)
T ss_dssp HHSCCSBCCCHHHHHHHHTTC-EEEEEEEEEEES----TTHHHHHHHHHHHCBSSB-SSCGGGCSE-------EEEEEEE
T ss_pred hccCCceeCCHHHhhhheeCC-ccceeeeccCCc----cchHHHHHHHHHHhhhhc-ccchhhhhe-------EEEEEEc
Confidence 999999999999999999999 789999888882 222334455778888888 778877764 7888999
Q ss_pred --cCChhhHHHHHHhhhccCccccccCCCCCCceeEeccCCCcCCCCCcccccceEEEeecC
Q 013212 318 --DVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNS 377 (447)
Q Consensus 318 --~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~ 377 (447)
++++.++++.+..++.+. + .|.++++++|..+|... +.++|+|+|.
T Consensus 264 ~~dl~~~ev~~a~~~I~~~~-----~-~~~~i~~G~~~~~~~~~--------~~~vtviatg 311 (338)
T 2r75_1 264 SEDIPYDIVDEVMERIHSKV-----H-PEAEIIFGAVLEPQEQD--------FIRVAIVATD 311 (338)
T ss_dssp CTTSCTTHHHHHHHHHHHHS-----C-TTCEEEEEEEECTTCCS--------EEEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHhc-----C-CCCcEEEEEEeCCCCCC--------eEEEEEEECC
Confidence 899999999988887654 2 67889999999887632 6788999886
No 9
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=6.4e-42 Score=338.33 Aligned_cols=295 Identities=15% Similarity=0.200 Sum_probs=241.9
Q ss_pred eEEEEecCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCccccccccccCCCccccceeeecCCCceeecccccccccc
Q 013212 3 ECISVHIGQAGIQVGNACWELYCLEHGIQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQL 82 (447)
Q Consensus 3 Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~~~~~~~~~~ 82 (447)
+|++|++|||||+++.++|+ |++. + ++.+.+|++...++.+.
T Consensus 13 ~I~viGvGg~G~n~v~~m~~-----~gi~-----------------------g---v~~i~~ntD~q~L~~~~------- 54 (320)
T 1ofu_A 13 VIKVIGVGGGGGNAVNHMAK-----NNVE-----------------------G---VEFICANTDAQALKNIA------- 54 (320)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTCC-----------------------S---EEEEEEESBTGGGSSCS-------
T ss_pred EEEEECcCchHHHHHHHHHH-----hCCC-----------------------C---CCEEEEcCCHHHHhcCC-------
Confidence 69999999999999999997 3321 1 47799999888766543
Q ss_pred CCcceeecC-----CCCcCCCccccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhc
Q 013212 83 FHPEQLISG-----KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDY 157 (447)
Q Consensus 83 ~~~~~~~~~-----~~g~gnn~a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~dey 157 (447)
.|+.+..+ ..|+||||+. |+++.++..|.||+.+|.|| +|+++||+|||||||+++.|++ +..+|
T Consensus 55 -a~~~i~iG~~~t~g~GAG~n~~~-----G~~~~ee~~d~I~~~le~~d---~~~i~as~GGGTGSG~~~~la~-~a~e~ 124 (320)
T 1ofu_A 55 -ARTVLQLGPGVTKGLGAGANPEV-----GRQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAE-VAKEM 124 (320)
T ss_dssp -CSEEEECCHHHHTTBCCCSCHHH-----HHHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHHHT
T ss_pred -CCcEEEccCCccCCCCCCCCHHH-----HHHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-HHHhc
Confidence 34555544 4599999984 57899999999999999998 5899999999999999997765 55667
Q ss_pred CCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhHHhhhhccCCCCCCCccchhHHHHHHhhhcccc
Q 013212 158 GKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTAS 237 (447)
Q Consensus 158 p~~~~~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~ 237 (447)
+ +++++|+|.+...|.++++||+.+++++|.+++|.+|++||++|+++|.+.+.+. ++|+.+|++|++.++++|.+
T Consensus 125 g---~lt~~vv~~P~~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~n~~l~~~v~~it~~ 200 (320)
T 1ofu_A 125 G---ILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVRGISDI 200 (320)
T ss_dssp T---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred C---CcEEEEEeCCccccchhHHHHHHHHHHHHHHhCCEEEEEecHHhhhhhhcCCCHH-HHHHHHHHHHHHHhcccHhh
Confidence 3 4555555444446889999999999999999999999999999999999888876 58999999999999999999
Q ss_pred ccCCCCcccchhhhhhcCCCCccccccccccccccccccccccccCHHHHHHhhcCCCCCccc-cCCCCCcccceecccc
Q 013212 238 LRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAK-CDPRHGKYMACCLMYR 316 (447)
Q Consensus 238 ~r~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~ls~~~~~R 316 (447)
+||||.+|.|+.++.++|+| |+++|+..++++- .....+++++.++ ++++. ++++.++++.+++..|
T Consensus 201 ir~pG~iNvD~~dv~t~l~~-~g~~~~g~g~a~g---------~~~~~~a~~~a~~--~~ll~~~d~~~ak~~l~~i~~~ 268 (320)
T 1ofu_A 201 IKRPGMINVDFADVKTVMSE-MGMAMMGTGCASG---------PNRAREATEAAIR--NPLLEDVNLQGARGILVNITAG 268 (320)
T ss_dssp HHSCSSSSCCHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CGGGTTCCGGGCSEEEEEEEEC
T ss_pred cccCCceeecHHHHHHhccC-CCeeEEEEEecCc---------ccHHHHHHHHHHh--ccccccCCccccceEEEEEEeC
Confidence 99999999999999999999 9999998876532 1235778888877 45665 8999999999999999
Q ss_pred ccCChhhHHHHHHhhhccCccccccCCCCCCceeEeccCCCcCCCCCcccccceEEEee
Q 013212 317 GDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIS 375 (447)
Q Consensus 317 G~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 375 (447)
|++++.++++.+..++.+... +..++++.+..++... +..+|+++
T Consensus 269 ~d~~~~ev~~a~~~i~~~~~~------~~~ii~G~~~~~~~~~--------~v~vtvia 313 (320)
T 1ofu_A 269 PDLSLGEYSDVGNIIEQFASE------HATVKVGTVIDADMRD--------ELHVTVVA 313 (320)
T ss_dssp TTCCHHHHHHHHHHHHHHSCT------TSEEEEEEEECTTCCS--------EEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHhcCC------CCcEEEEEEcCCCCCC--------eEEEEEEE
Confidence 999999999999888765322 4667888887766521 45667665
No 10
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=100.00 E-value=5.8e-42 Score=343.94 Aligned_cols=297 Identities=15% Similarity=0.187 Sum_probs=240.8
Q ss_pred eeEEEEecCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCccccccccccCCCccccceeeecCCCceeeccccccccc
Q 013212 2 RECISVHIGQAGIQVGNACWELYCLEHGIQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQ 81 (447)
Q Consensus 2 ~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~~~~~~~~~ 81 (447)
.+|++|++|||||+++.+||+ |++. + .+.+.+|++...++.+.
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~-----------------------g---v~fia~NTD~q~L~~~~------ 54 (382)
T 1rq2_A 12 AVIKVVGIGGGGVNAVNRMIE-----QGLK-----------------------G---VEFIAINTDAQALLMSD------ 54 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCC-----------------------S---EEEEEEESCHHHHHHCC------
T ss_pred CEEEEECcCchHHHHHHHHHH-----hCCC-----------------------C---CCEEEecCCHHHHhcCC------
Confidence 479999999999999999997 3321 1 47799999888766543
Q ss_pred cCCcceeecCC-----CCcCCCccccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhh
Q 013212 82 LFHPEQLISGK-----EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 156 (447)
Q Consensus 82 ~~~~~~~~~~~-----~g~gnn~a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~de 156 (447)
.|+.+..++ .|+||||+. |+++.++.+|.||+++|.|| +|+|+||+|||||||+++.|++ |+.+
T Consensus 55 --a~~~i~iG~~~t~G~GAG~n~~~-----G~~~aee~~d~Ir~~le~~d---~~fi~as~GGGTGSG~ap~lae-la~e 123 (382)
T 1rq2_A 55 --ADVKLDVGRDSTRGLGAGADPEV-----GRKAAEDAKDEIEELLRGAD---MVFVTAGEGGGTGTGGAPVVAS-IARK 123 (382)
T ss_dssp --CSEEEECCTTTC-----CCCHHH-----HHHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHHH
T ss_pred --CCcEEEecccccCCCCCCCChHH-----HHHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-HHHH
Confidence 345555543 489999984 57899999999999999998 5999999999999999999998 7777
Q ss_pred cCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhHHhhhhccCCCCCCCccchhHHHHHHhhhccc
Q 013212 157 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 236 (447)
Q Consensus 157 yp~~~~~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 236 (447)
|+ +..+++.+.|+ ..|.++++||+++++++|.+++|.+|++||++|+++|.+.+.+. ++|..+|++|++.++++|.
T Consensus 124 ~g-~ltvsVv~~Pf--~~Eg~~~~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~vs~it~ 199 (382)
T 1rq2_A 124 LG-ALTVGVVTRPF--SFEGKRRSNQAENGIAALRESCDTLIVIPNDRLLQMGDAAVSLM-DAFRSADEVLLNGVQGITD 199 (382)
T ss_dssp HT-CEEEEEEEECC--GGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHTTSSCTTCCHH-HHHHHHHHHHHHHHHHHHH
T ss_pred cC-CcEEEEEecCc--ccccchHHHHHHHHHHHHHHhCCEEEEEechhHHHHhcCCCCHH-HHHHHHHHHHHHHHHHHHH
Confidence 86 34444444554 46889999999999999999999999999999999998888876 6899999999999999999
Q ss_pred cccCCCCcccchhhhhhcCCCCccccccccccccccccccccccccCHHHHHHhhcCCCCCccccCCCCCcccceecccc
Q 013212 237 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 316 (447)
Q Consensus 237 ~~r~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~R 316 (447)
++||||.+|.|+.++.++|+| |+++|+..+++.- .....++++..++ ++++.|+++.++++.+.+..+
T Consensus 200 ~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~i~gg 267 (382)
T 1rq2_A 200 LITTPGLINVDFADVKGIMSG-AGTALMGIGSARG---------EGRSLKAAEIAIN--SPLLEASMEGAQGVLMSIAGG 267 (382)
T ss_dssp HHHSBCSSCCCHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CGGGTTCGGGCSEEEEEEEEC
T ss_pred HHccCCceeccHHHHHHhccC-CCeeEEEeeeccc---------ccHHHHHHHHHHh--CcCcCCChhchheEEEEEEeC
Confidence 999999999999999999999 8888887765421 1346778888874 788889999999998766666
Q ss_pred ccCChhhHHHHHHhhhccCccccccCCCCCCceeEeccCCCcCCCCCcccccceEEEeec
Q 013212 317 GDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISN 376 (447)
Q Consensus 317 G~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N 376 (447)
+++++.++++.+..++.+.. .+.+++++.|..++... +..+|+|+-
T Consensus 268 ~dl~~~ev~~a~~~I~~~~~------~~a~ii~G~~~d~~~~~--------~v~VtvIat 313 (382)
T 1rq2_A 268 SDLGLFEINEAASLVQDAAH------PDANIIFGTVIDDSLGD--------EVRVTVIAA 313 (382)
T ss_dssp TTCCHHHHHHHHHHHHHHSC------TTCEEEEEEEECGGGTT--------EEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHhhC------CCCCEEEEEEeCCCCCC--------eEEEEEEEc
Confidence 68999999999888876542 36678888887765421 456666654
No 11
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=1.9e-41 Score=341.48 Aligned_cols=298 Identities=14% Similarity=0.199 Sum_probs=246.4
Q ss_pred eeEEEEecCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCccccccccccCCCccccceeeecCCCceeeccccccccc
Q 013212 2 RECISVHIGQAGIQVGNACWELYCLEHGIQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQ 81 (447)
Q Consensus 2 ~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~~~~~~~~~ 81 (447)
.+|++|++|||||+++.+||+ |++. | .+.+.+|++...++.+.
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~-----------------------g---v~fia~NTD~q~L~~~~------ 54 (394)
T 2vaw_A 12 AVIKVIGVGGGGGNAVNHMAK-----NNVE-----------------------G---VEFICANTDAQALKNIA------ 54 (394)
T ss_dssp CCEEEEEEHHHHHHHHHHHHT-----TTCC-----------------------S---EEEEEEESCTTTTSSCS------
T ss_pred CEEEEECcCchHHHHHHHHHH-----cCCC-----------------------C---CCEEEecCCHHHHhcCC------
Confidence 379999999999999999997 3321 1 47799999888765443
Q ss_pred cCCcceeecC-----CCCcCCCccccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhh
Q 013212 82 LFHPEQLISG-----KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 156 (447)
Q Consensus 82 ~~~~~~~~~~-----~~g~gnn~a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~de 156 (447)
.|+.+..+ ..|+||||+. |+++.++.+|.||+.+|.|| +|+|+||+|||||||+++.|++.++ +
T Consensus 55 --a~~ki~iG~~~t~G~GAG~n~~~-----G~~~aee~~d~I~~~le~~d---~~fI~asmGGGTGSG~ap~lae~~k-e 123 (394)
T 2vaw_A 55 --ARTVLQLGPGVTKGLGAGANPEV-----GRQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAEVAK-E 123 (394)
T ss_dssp --SSCEEECCHHHHSSSCCCSCHHH-----HHHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHHHHH-H
T ss_pred --CCcEEEccccccCCCCCCCCHHH-----HHHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHHHHH-H
Confidence 24555544 4599999984 57889999999999999998 5899999999999999999999999 5
Q ss_pred cCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhHHhhhhccCCCCCCCccchhHHHHHHhhhccc
Q 013212 157 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 236 (447)
Q Consensus 157 yp~~~~~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 236 (447)
|+ +++++|+|.+...|..+++||+.+++++|.+++|.+|++||++|+++|.+.+.+. ++|..+|++|++.++++|.
T Consensus 124 ~g---~ltvsVv~~Pf~~Eg~~r~ynA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~v~~it~ 199 (394)
T 2vaw_A 124 MG---ILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVRGISD 199 (394)
T ss_dssp HT---CEEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHHHHHH
T ss_pred cC---CcEEEEecCCcccccchhhHHHHHHHHHHHHhCCEEEEEecHHHHHHhhcCCChH-HHHHHHHHHHHHHHHHHHH
Confidence 63 5555555444446889999999999999999999999999999999999888876 5899999999999999999
Q ss_pred cccCCCCcccchhhhhhcCCCCccccccccccccccccccccccccCHHHHHHhhcCCCCCccccCCCCCcccceecccc
Q 013212 237 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 316 (447)
Q Consensus 237 ~~r~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~R 316 (447)
++||||.+|.|+.++.++|+| |+++++..+.+.- .....+++++.|+ ++++..|+++.++++.+++..|
T Consensus 200 ~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~rv~ea~~~A~~-spLl~~~d~~~ak~~lv~i~~~ 268 (394)
T 2vaw_A 200 IIKRPGMINVDFADVKTVMSE-MGMAMMGTGCASG---------PNRAREATEAAIR-NPLLEDVNLQGARGILVNITAG 268 (394)
T ss_dssp HHHSBCSSCCCHHHHHHHHTT-TCCBEEEEEEECS---------TTHHHHHHHHHHT-CGGGTTCCTTTCSEEEEEEEEC
T ss_pred HhcCCCcccccHHHHHHhccC-CCceeEEEEeccc---------cchHHHHHHHHHh-cCccCCCCccccceeEEEEEeC
Confidence 999999999999999999999 7888877665421 1357889999998 6677779999999999999999
Q ss_pred ccCChhhHHHHHHhhhccCccccccCCCCCCceeEeccCCCcCCCCCcccccceEEEeec
Q 013212 317 GDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISN 376 (447)
Q Consensus 317 G~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N 376 (447)
+++++.++++.+..++.+... +.+++++.|..++... +..+|+|+-
T Consensus 269 ~dl~~~ev~~a~~~I~~~~~~------~a~i~~G~~~d~~~~~--------~v~VtvIat 314 (394)
T 2vaw_A 269 PDLSLGEYSDVGNIIEQFASE------HATVKVGTVIDADMRD--------ELHVTVVAT 314 (394)
T ss_dssp TTCCHHHHHHHHHHHHHHSCT------TSEEEEEEEECSSCCS--------CEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHhcCC------CCCEEEEeecCCCCCC--------eEEEEEEEc
Confidence 999999999999888765421 5668888888776532 456666654
No 12
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=100.00 E-value=2.2e-41 Score=339.75 Aligned_cols=286 Identities=15% Similarity=0.193 Sum_probs=237.4
Q ss_pred eeEEEEecCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCccccccccccCCCccccceeeecCCCceeeccccccccc
Q 013212 2 RECISVHIGQAGIQVGNACWELYCLEHGIQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQ 81 (447)
Q Consensus 2 ~Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~~~~~~~~~ 81 (447)
.+|..|++||||++++.++|+. ++. + .+.+.+|++...++.+..
T Consensus 12 ~~I~vIGvGg~G~navn~m~~~-----gi~-----------------------g---v~fia~NTD~q~L~~~~a----- 55 (382)
T 2vxy_A 12 ASIKVIGVGGGGNNAVNRMIEN-----EVQ-----------------------G---VEYIAVNTDAQALNLSKA----- 55 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHHT-----TCC-----------------------S---CEEEEEESBHHHHHTCCC-----
T ss_pred CEEEEEeeCchHHHHHHHHHHh-----CCC-----------------------C---CCEEEEeCCHHHHhcCCC-----
Confidence 3699999999999999999973 221 1 577999998887665532
Q ss_pred cCCcceeecC-----CCCcCCCccccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhh
Q 013212 82 LFHPEQLISG-----KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 156 (447)
Q Consensus 82 ~~~~~~~~~~-----~~g~gnn~a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~de 156 (447)
|+.+..+ ..|+||||+. |+++.++.+|.||+++|.|| +|+|+||+|||||||+++.|++.+++
T Consensus 56 ---~~ki~iG~~~t~G~GAGnn~a~-----G~e~aee~~d~Ir~~le~~D---~ffI~asmGGGTGSG~apvla~~ake- 123 (382)
T 2vxy_A 56 ---EVKMQIGAKLTRGLGAGANPEV-----GKKAAEESKEQIEEALKGAD---MVFVTAGMGGGTGTGAAPVIAQIAKD- 123 (382)
T ss_dssp ---SEEEECCHHHHTTBCCTTCHHH-----HHHHHHHTHHHHHHHHTTCS---EEEEEEESSSSHHHHHHHHHHHHHHH-
T ss_pred ---CcEEEecccccCCCCCCCChHH-----HHHHHHHHHHHHHHHHhhCC---EEEEEeccCCCCCCcHHHHHHHHHHH-
Confidence 3344433 4599999994 57899999999999999998 58999999999999999999998876
Q ss_pred cCCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhHHhhhhccCCCCCCCccchhHHHHHHhhhccc
Q 013212 157 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 236 (447)
Q Consensus 157 yp~~~~~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 236 (447)
|+ +++++|.|.+...|.++++||+.+++++|.+++|.+|++||++|+++|.+.+.+. ++|.++|++|++.++++|.
T Consensus 124 ~g---~ltvsVvt~Pf~~Eg~~r~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~vsgIt~ 199 (382)
T 2vxy_A 124 LG---ALTVGVVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPML-EAFREADNVLRQGVQGISD 199 (382)
T ss_dssp TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHSCTTCCHH-HHHHHHHHHHHHHHHHHHT
T ss_pred hC---CCeEEEEeCCcccccchhHHHHHHHHHHHHHhCCEEEEEccHHHHHHHHhcCCHH-HHHHHHHHHHHHHHHHHHH
Confidence 74 4555555554557899999999999999999999999999999999998888876 5899999999999999999
Q ss_pred cccCCCCcccchhhhhhcCCCCccccccccccccccccccccccccCHHHHHHhhcCCCCCccccCCCCCcccceecccc
Q 013212 237 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 316 (447)
Q Consensus 237 ~~r~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~R 316 (447)
++||||.+|.|+.++.++|+| |+++|+..+++.- .....+++++.++ ++++.|+++.++|+.+++..+
T Consensus 200 ~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~i~gg 267 (382)
T 2vxy_A 200 LIATPGLINLDFADVKTIMSN-KGSALMGIGIATG---------ENRAAEAAKKAIS--SPLLEAAIDGAQGVLMNITGG 267 (382)
T ss_dssp TTSSCCTTCCCHHHHHHHTTC-SSEEEEEEEEEES---------TTHHHHHHHHHHT--CTTSCSCGGGCSEEEEEEEEC
T ss_pred HHcCCCccccCHHHHHHhccC-CCceEEEEEeccc---------ccHHHHHHHHHHh--CcCcCCChhhcceeEEEEEeC
Confidence 999999999999999999999 9999988776531 1346778888885 467789999999997766666
Q ss_pred ccCChhhHHHHHHhhhccCccccccCCCCCCceeEeccCCC
Q 013212 317 GDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPT 357 (447)
Q Consensus 317 G~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~ 357 (447)
+++++.++++.+..++.+.. .+.+++++.|..++.
T Consensus 268 ~dl~~~ev~~a~~~I~~~~~------~~a~ii~G~~~d~~~ 302 (382)
T 2vxy_A 268 TNLSLYEVQEAADIVASASD------QDVNMIFGSVINENL 302 (382)
T ss_dssp TTCCHHHHHHHHHHHHHHSC------TTCEEEEEEEECTTC
T ss_pred CCCCHHHHHHHHHHHHHhcC------CCCCEEEEeecCCCC
Confidence 68999999999888876543 256688888877654
No 13
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=100.00 E-value=4e-37 Score=307.85 Aligned_cols=283 Identities=13% Similarity=0.089 Sum_probs=220.8
Q ss_pred EEEEecCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCccccccccccCCCccccceeeecCCCceeeccccccccccC
Q 013212 4 CISVHIGQAGIQVGNACWELYCLEHGIQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLF 83 (447)
Q Consensus 4 ii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~~~~~~~~~~~ 83 (447)
|..|.+||+|+.+..++.+. + -.+++|.||+|+||+++.+++.++..+.
T Consensus 45 i~VIGvGg~G~n~v~~m~~~-----~----------------------~~~g~~~~~~iavNtd~~dl~~L~~~~~---- 93 (427)
T 3m89_A 45 WGVIGAGQKGNKEADLFAGY-----K----------------------FSNGTTCYPTLAVNFAESDMMHLQNIIK---- 93 (427)
T ss_dssp EEEEEEHHHHHHHHHHHTTC-----B----------------------CTTSCBSCCEEEEESSGGGGTTCSSSCG----
T ss_pred EEEEEECCcHHHHHHHHHHh-----C----------------------cccCCcCceEEEEECCHHHHHHHhcCCC----
Confidence 67899999999999888532 1 0135789999999999999988876653
Q ss_pred Cccee-ecCCCCcCCCccccccccc-----hhh--HHHHHHHHHHHHh---hcCCCcceeEEeeCCCCcccCchHHHHHH
Q 013212 84 HPEQL-ISGKEDAANNFARGHYTIG-----KEI--VDLCLDRIRKLAD---NCTGLQGFLVFNAVGGGTGSGLGSLLLER 152 (447)
Q Consensus 84 ~~~~~-~~~~~g~gnn~a~G~~~~g-----~~~--~e~~~d~ir~~~E---~cD~lqgf~i~~sl~GGtGSG~~s~l~e~ 152 (447)
++.+ +.++.|+|+||+.|++..| .+. .|++++.||+.+| .||.+|+|++++|+|||||||+|+.|++.
T Consensus 94 -~~~i~l~G~~GAG~np~~G~~~ag~~~~~~e~~~~d~I~~~I~~~~e~~~~cd~~d~f~I~aglGGGTGSG~gp~la~~ 172 (427)
T 3m89_A 94 -EDRIHFDGLKGAARTPSVVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSLVLQL 172 (427)
T ss_dssp -GGEEEC-----------CHHHHHSSSSSTTHHHHHHHHHHHHHHHSBCTTSCBCCSEEEEEEETTSHHHHHHHHHHHHH
T ss_pred -cceEEecCCCCCCCCHHHHHHHhhcccCcccchHHHHHHHHHHHHhhccccCCCCCEEEEeeecCCCccccHHHHHHHH
Confidence 4454 5577899999999998874 554 9999999999999 88999999999999999999999999999
Q ss_pred hhhhcCCcceeEEEEecCCCCCCccchhhHHHHHHHHhh---c------------cCCeeeeecchhHHhhhhccCC--C
Q 013212 153 LSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLL---E------------HTDVAVLLDNEAIYDICRRSLD--I 215 (447)
Q Consensus 153 l~deyp~~~~~~~~v~P~~~~~~~~~~~yN~~lsl~~l~---e------------~sd~~i~~dN~~l~~~~~~~~~--~ 215 (447)
++++|+++++++++++|+.. + .++||+++++++|. + ++|.+|++||++|..++.+... .
T Consensus 173 lke~~~~~~~~~vvt~P~~~--e--~~~~NA~~~l~~L~~L~~~~~~~~~~~~~~~~D~vividNe~l~~i~~~~~~~~~ 248 (427)
T 3m89_A 173 IREQFFPCPVSMLISLPSGD--P--DEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNTQMQRIIESQKGTKD 248 (427)
T ss_dssp HHTTCSSSCEEEEEEECCSC--H--HHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHHHHHHHHHHSSCSSS
T ss_pred HHHhcCCCcEEEEEEECCCC--c--cHHHHHHHHHHHHHHHhhhhcccccccccccccEEEEEehHHHHHHHhhcccccc
Confidence 99999999999999999864 2 34599999999974 4 9999999999998777654332 1
Q ss_pred C---CCCcc-chhHHHHHHhhhccccc-c-CCCCcccchhhhhhcCCCCccccccccccccccccccccccccCHHHHHH
Q 013212 216 E---RPTYT-NLNRLVSQVISSLTASL-R-FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITN 289 (447)
Q Consensus 216 ~---~~~~~-~~N~~ia~~i~~~t~~~-r-~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~ 289 (447)
. .++|+ .+|++|++.|.+++... | +||.+|.|+.++.++|.|.|. |++.++++...... .+..+.++
T Consensus 249 ~~~~~~af~~~aN~~Ia~~I~~I~~~i~~~~~G~iNvD~aDv~t~L~~~~G--~a~iG~a~~~~~d~-----~~~~~ai~ 321 (427)
T 3m89_A 249 LKNRYVNWKEVANDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGR--FLTIGKARIAKFDL-----HSLENSIK 321 (427)
T ss_dssp CCCSCSCHHHHHHHHHHHHHHHHHHHHHHCCCSSSCCCHHHHHHHHHSSCS--EEEEEEEEECSCSH-----HHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHhccCCCCcEeecHHHHHHhCCCCCC--eEEEEEecccccch-----hhHHHHHH
Confidence 2 23899 89999999999998855 4 799999999999999999997 67778887754321 24667888
Q ss_pred hhcCCCCCccccCCCCCcccceeccccccCChhhHHHHHH
Q 013212 290 SAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA 329 (447)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~~~~~~~~~ 329 (447)
..|++++++..+++..++++..+++..-+....+..+...
T Consensus 322 ~al~~~~Ll~~~d~~~Ak~~lv~i~g~~~~~~~~~~~~~~ 361 (427)
T 3m89_A 322 RSLDEGFFSAEHQFETATMYGGFVLRPSNADFFKDVNTEN 361 (427)
T ss_dssp HHHHSSTTCSCCCGGGCCEEEEEEEEESSCGGGGCHHHHH
T ss_pred HHHhCCCcccccCcccccEEEEEEEeCchhhhhhhHHHHH
Confidence 8898888899999999999988877654544444433333
No 14
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=99.96 E-value=1.9e-30 Score=257.83 Aligned_cols=267 Identities=14% Similarity=0.215 Sum_probs=203.0
Q ss_pred eEEEEecCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCccccccccccCCCccccceeeecCCCceeecccccccccc
Q 013212 3 ECISVHIGQAGIQVGNACWELYCLEHGIQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQL 82 (447)
Q Consensus 3 Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~~~~~~~~~~ 82 (447)
-|..|.+|++|+.+-.+..+. ++. + ...|.++++...+..+.
T Consensus 19 ~IkVIGVGG~G~NaVn~m~~~-----~~~-----------------------g---vefiaiNTD~qaL~~s~------- 60 (396)
T 4dxd_A 19 TLKVIGVGGGGNNAVNRMIDH-----GMN-----------------------N---VEFIAINTDGQALNLSK------- 60 (396)
T ss_dssp CEEEEEEHHHHHHHHHHHHHH-----CCC-----------------------S---EEEEEEESCHHHHHTCC-------
T ss_pred eEEEEEECCcHHHHHHHHHHh-----CCC-----------------------C---ceEEEEECCHHHHhcCC-------
Confidence 377899999999998888654 110 1 23488888776654332
Q ss_pred CCcceeecC-----CCCcCCCccccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhc
Q 013212 83 FHPEQLISG-----KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDY 157 (447)
Q Consensus 83 ~~~~~~~~~-----~~g~gnn~a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~dey 157 (447)
.++.+..+ ..|+|+||+. |+++.++..|.||+.+|.|| +|+|+||+|||||||+++.|++ +..+|
T Consensus 61 -a~~ki~lG~~~t~GlGAG~np~v-----G~eaaee~~d~Ir~~le~~D---~ffItagmGGGTGSGaapvIae-iake~ 130 (396)
T 4dxd_A 61 -AESKIQIGEKLTRGLGAGANPEI-----GKKAAEESREQIEDAIQGAD---MVFVTSGMGGGTGTGAAPVVAK-IAKEM 130 (396)
T ss_dssp -CSEEEECCHHHHTTSCCTTCHHH-----HHHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHHHT
T ss_pred -CccEEEcCccccCCCCCCCChHH-----HHHHHHHHHHHHHHHHcCCC---EEEEEeccCCCccccHHHHHHH-HHHhc
Confidence 22334433 2589999874 57899999999999999999 5999999999999999998776 55667
Q ss_pred CCcceeEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhHHhhhhccCCCCCCCccchhHHHHHHhhhcccc
Q 013212 158 GKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTAS 237 (447)
Q Consensus 158 p~~~~~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~ 237 (447)
+ +++++|+|.+...|..+++||+++++++|.+++|++|++||++|+++|.+.+.+.. +|..+|++|++.++++|.+
T Consensus 131 g---~LtvsVVt~Pf~~Eg~~r~yNA~lgl~~L~e~vD~vIvIdNeaL~~I~~~~l~i~~-af~~aN~ll~q~VsgIT~~ 206 (396)
T 4dxd_A 131 G---ALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMME-AFKEADNVLRQGVQGISDL 206 (396)
T ss_dssp T---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHSSEEEEEEGGGGGGTCCTTCCHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred C---CceEEEEeCCccccchHHHHHHHHHHHHHHhhCCEEEEEcCHHHHHhhcccccHHH-HHHHHHHHHHHHHHhhhhh
Confidence 5 57777776655578899999999999999999999999999999999988888765 9999999999999999999
Q ss_pred ccCCCCcccchhhhhhcCCCCccccccccccccccccccccccccCHHHHHHhhcCCCCCccccCCCCCcccceeccccc
Q 013212 238 LRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRG 317 (447)
Q Consensus 238 ~r~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~RG 317 (447)
+||||.+|.|+.++.++|.+. ...++..+.++-... ..+..+..+ ++.+...+....+.+-..+....
T Consensus 207 irfpG~iNvDfaDv~t~m~~~-G~A~mG~G~a~G~~r---------a~~A~~~Ai--~sPLL~~~i~gAkgvLvnItgg~ 274 (396)
T 4dxd_A 207 IAVSGEVNLDFADVKTIMSNQ-GSALMGIGVSSGENR---------AVEAAKKAI--SSPLLETSIVGAQGVLMNITGGE 274 (396)
T ss_dssp HHSCCTBCCCHHHHHHHHTTC-EECEEEEEEEESTTH---------HHHHHHHHH--CCSSCSSCSTTCCEEEEEEEECT
T ss_pred hccCCcccCCHHHHHHHhhcC-CeEEEEEEeccCCch---------HHHHHHHHH--hCccccCChhhhcceEEEEEcCC
Confidence 999999999999999999987 457777666654211 122222222 22333444444454444444456
Q ss_pred cCChhhHHHHHHhhhc
Q 013212 318 DVVPKDVNAAVATIKT 333 (447)
Q Consensus 318 ~~~~~~~~~~~~~~~~ 333 (447)
+++..++.+....++.
T Consensus 275 dl~l~Ev~~~~~~i~~ 290 (396)
T 4dxd_A 275 SLSLFEAQEAADIVQD 290 (396)
T ss_dssp TCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 7888888888776654
No 15
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=99.96 E-value=4e-30 Score=252.97 Aligned_cols=194 Identities=16% Similarity=0.215 Sum_probs=160.4
Q ss_pred EEEEecCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCccccccccccCCCccccceeeecCCCceeeccccccccccC
Q 013212 4 CISVHIGQAGIQVGNACWELYCLEHGIQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLF 83 (447)
Q Consensus 4 ii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~~~~~~~~~~~ 83 (447)
|..|.+|++|+.+..++.+. +. + -..|+++++...+..+..-
T Consensus 7 I~VIGvGGaG~Nav~~m~~~-----~~------------------------~---v~~iaiNTD~q~L~~~~~~------ 48 (360)
T 3v3t_A 7 IVFAPIGQGGGNIVDTLLGI-----CG------------------------D---YNALFINTSKKDLDSLKHA------ 48 (360)
T ss_dssp EEEEEBSHHHHHHHHHHHHH-----CT------------------------T---SEECEEESCHHHHHTCSSC------
T ss_pred EEEEEeCCcHHHHHHHHHHc-----CC------------------------C---ceEEEEECCHHHHhhCCCC------
Confidence 77899999999999999764 00 0 2457888887766544221
Q ss_pred Cccee-ecCCCCcCCCccccccccchhhHHHHH-HHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcc
Q 013212 84 HPEQL-ISGKEDAANNFARGHYTIGKEIVDLCL-DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 161 (447)
Q Consensus 84 ~~~~~-~~~~~g~gnn~a~G~~~~g~~~~e~~~-d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~ 161 (447)
++.+ +....|+|+||.. |+++.++.. |.||+.+|+|+.+|||+++||+|||||||+++.|++.++++||+++
T Consensus 49 -~~ki~ig~GlGAG~np~v-----G~eaaee~~~d~Ir~~le~c~g~dgffI~aslGGGTGSG~~pvLae~lke~~~~k~ 122 (360)
T 3v3t_A 49 -KHTYHIPYAEGCGKERKK-----AVGYAQTYYKQIIAQIMEKFSSCDIVIFVATMAGGAGSGITPPILGLAKQMYPNKH 122 (360)
T ss_dssp -SCEEECC------CCHHH-----HHHHHGGGHHHHHHHHHHHTTTCSEEEEEEETTSHHHHHHHHHHHHHHHHHCTTSE
T ss_pred -ccEEEcCCCCCCCCCHHH-----HHHHHHHhHHHHHHHHHhcCCCCCeEEEeeccCCCccccHHHHHHHHHHHhCCCCe
Confidence 1222 2334689999875 568888888 9999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCCCCCccchhhHHHHHHHHhhc---cCCee--eeecchhHHhhhhccCCCCCCCccchhHHHHHHhhhccc
Q 013212 162 KLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE---HTDVA--VLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 236 (447)
Q Consensus 162 ~~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e---~sd~~--i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 236 (447)
+..++|+|++. +.++++||+++++++|.+ ++|.+ |++||++ .++|.++|++|+++++++|.
T Consensus 123 v~~vtV~Pf~~--Egvv~pyNA~l~l~~L~e~sD~vD~lcvividNea------------~~ay~~lN~lIaq~vs~lt~ 188 (360)
T 3v3t_A 123 FGFVGVLPKAT--EDIDEHMNAIACWNDIMRSTNEGKDISIYLLDNNK------------REKESDINKEFATLFNDFMN 188 (360)
T ss_dssp EEEEEEECCTT--SCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEGGG------------SSSHHHHHHHHHHHHHHHHG
T ss_pred EEEEEEeCCCc--cchhhHHHHHHHHHHHHhhhccCCceEEEEEeCCC------------chhHHHHHHHHHHHHHHHHH
Confidence 99999999975 679999999999999999 55555 9999998 56899999999999999999
Q ss_pred cccCCCCcccchhhhhhcC
Q 013212 237 SLRFDGALNVDVTEFQTNL 255 (447)
Q Consensus 237 ~~r~~~~~n~~l~~~~~~L 255 (447)
.+|+||.+|+|+.++.+-+
T Consensus 189 ~l~~~G~iNVDfaDv~tvm 207 (360)
T 3v3t_A 189 MSESHAEGVVDEDEISKLL 207 (360)
T ss_dssp GGSCCSSCCCCHHHHHHHH
T ss_pred hhccCCceeeeHHHHHHHH
Confidence 9999999999999996554
No 16
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=99.75 E-value=2.7e-18 Score=173.54 Aligned_cols=346 Identities=12% Similarity=0.066 Sum_probs=202.4
Q ss_pred EEEEecCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCccccccccccCCCccccceeeecCCCceeeccccccccccC
Q 013212 4 CISVHIGQAGIQVGNACWELYCLEHGIQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLF 83 (447)
Q Consensus 4 ii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~~~~~~~~~~~ 83 (447)
|..|.+||||+.|.+.|.+. .. ......+..++|+|+++...+..+... ...
T Consensus 18 i~vIGvGgaG~~ivd~~~~~-----~~--------------------~~~~~~~~~~~iaiNTd~~~L~~~~~~---~~~ 69 (389)
T 4ei7_A 18 FGFLGLGMGGCAIAAECANK-----ET--------------------QIKNNKYPYRAILVNTNSQDFNKIEIK---NTG 69 (389)
T ss_dssp EEEEEEHHHHHHHHHHHHTC-----CC--------------------CCTTCSCCCEEEEEECCCHHHHHSCCC---SCS
T ss_pred EEEEEECCchHHHHHHHHhc-----cc--------------------ccccccccccEEEEECCHHHHhhccCc---chh
Confidence 67899999999999998643 10 011223446899999998876654321 122
Q ss_pred CcceeecCC--CCcCCCccccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcc
Q 013212 84 HPEQLISGK--EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 161 (447)
Q Consensus 84 ~~~~~~~~~--~g~gnn~a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~ 161 (447)
.....++.. .|+|+||..|+ ...++..+++.+.|+..++.+| -+++++++|||||+|.++.+++.+++. ..+
T Consensus 70 ~~g~~~~~g~g~GaG~~p~~G~-~aa~e~~~~i~~~l~~~~~~~d---~vfi~ag~GGGTGtGa~pvia~~~ke~--~~~ 143 (389)
T 4ei7_A 70 NVRKIQLEGYEQGAARNPQVGE-EAFVKHETKIFEAVKQEFEDRD---FIWITCGLGGGTGTGALLKAIEMLYEH--DYN 143 (389)
T ss_dssp SEEEEECTTCCCTTCCCHHHHH-HHHHHTHHHHHHHHHHHTTTCS---EEEEEEETTSSHHHHHHHHHHHHHHHT--TCC
T ss_pred hhhhhccCCCCCCCCCChHHHH-HHHHHHHHHHHHHHHhhcCCcc---EEEEEecCCCCCccccHHHHHHHHHHc--CCC
Confidence 222333322 49999988775 2345556666666776666766 459999999999999999999999985 456
Q ss_pred eeEEEEecCCCCCCccchhhHHHHHHHHh---hccCCeeeeecchhHHhhhhccCC--CCCCCccchhHHHHHHhhhccc
Q 013212 162 KLGFTVYPSPQVSTSVVEPYNSVLSTHSL---LEHTDVAVLLDNEAIYDICRRSLD--IERPTYTNLNRLVSQVISSLTA 236 (447)
Q Consensus 162 ~~~~~v~P~~~~~~~~~~~yN~~lsl~~l---~e~sd~~i~~dN~~l~~~~~~~~~--~~~~~~~~~N~~ia~~i~~~t~ 236 (447)
...++++|+.. |...+..|+.-++..| .+.+|.+|++||+.|.++..+.-. .-...|+..|.+|++.+..++.
T Consensus 144 ~~~vvt~Pf~~--Eg~~~~~~A~~~i~~l~~~~~~vd~~ividN~~l~~~~~~~~~~~~~~~af~~an~~l~~~v~~i~~ 221 (389)
T 4ei7_A 144 FGLLLTLPRDA--EALKVLENATSRIRSIAMNQEAFGSIVLIDNAKLYRKFEEENPSALANEYTSYSNKYIADALHEINL 221 (389)
T ss_dssp EEEEEEECCGG--GHHHHHHHHHHHHHHHHHTGGGSSEEEEEEHHHHHHHHHHHCTTCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCc--CchHHHHHHHHHHHHHHHHhccCCeEEEeccHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 77778899863 5555555555555555 678999999999999998754321 1124688999999998777654
Q ss_pred cccC---CCCcccchhhhhhcCCCCccccccccccccccccccccccccCH-HHHHHhhcCCCC-CccccCCCCCcccce
Q 013212 237 SLRF---DGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSV-AEITNSAFEPSS-MMAKCDPRHGKYMAC 311 (447)
Q Consensus 237 ~~r~---~~~~n~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~-~~l~~~~~~~~~-~~~~~~~~~~~~ls~ 311 (447)
.... +|..|.|+.++.+-|..... ...+++............... .-+.+.+-++-. ....++....+.. .
T Consensus 222 ~~~~~~~~g~in~D~aDv~~vm~~~G~---a~~G~~~~~~~~~~~~~~~~~~~a~~~ai~~~ll~~~~~~~i~~A~~~-l 297 (389)
T 4ei7_A 222 VTSSFTPFSDTHFDASEFAQVINTPGV---LSLAKLELKSNQLDTENPLGYLTQLGNALEKGVLYDTEREELESAKKS-A 297 (389)
T ss_dssp HTTSSEESSSCCCCHHHHHHHHTSSEE---EEEEEEEEEGGGCCTTSTHHHHHHHHHHHHBCSSSBCCHHHHTTCSEE-E
T ss_pred HHhCCCCCCeEEeeHHHHHHHhcCCCE---EEEEeeeccccccccccchHHHHHHHHHHhccccccccccChhhhheE-E
Confidence 4333 48899999999887754432 223333221111000000011 111122111100 0111111222211 2
Q ss_pred eccccccC------ChhhHHHHHHhhhccCccccccCCCCCCceeEeccCCCcCCCCCcccccceEEEeecCcchHHHHH
Q 013212 312 CLMYRGDV------VPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFS 385 (447)
Q Consensus 312 ~~~~RG~~------~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~ 385 (447)
..+.-|.. ....+.+....+ ..+..|.+......+....+... ......++++.++......+.
T Consensus 298 l~I~~~~~~~~~~~~~~~~~~~~~~i-----~~~~~~~~~~~~~i~~g~~~~~~-----~~~~V~v~viatG~~~~~~~~ 367 (389)
T 4ei7_A 298 LSIVTSPLRAGRLYNFSFLNQMENFL-----KERTPYVDERPIAPYVNKHTTKK-----EEDIVKFYSVVAGLPLPKRVS 367 (389)
T ss_dssp EEEEECHHHHHHHSSHHHHHHHHHHH-----HHHSTTCSCCCEEEEECTTCCGG-----GTTEEEEEEEEEEECCCHHHH
T ss_pred EEEEcCcccchhhhhHHHHHHHHHHH-----HhhccccCcccceEEecCCCCcC-----CCCeEEEEEEEecCCchHhHH
Confidence 22222311 111111111111 12446665544444433332211 112456788999999888999
Q ss_pred HHHHHHHHhhcccc
Q 013212 386 RIDHKFDLMYAKRA 399 (447)
Q Consensus 386 ~l~~~~~~m~~rkA 399 (447)
++.+.+.++..+++
T Consensus 368 ~~~~~~~~~~e~~~ 381 (389)
T 4ei7_A 368 DIIDEITRIKEERE 381 (389)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999888776653
No 17
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=99.26 E-value=2.8e-12 Score=121.67 Aligned_cols=176 Identities=16% Similarity=0.240 Sum_probs=120.2
Q ss_pred eEEEEecCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCccccccccccCCCccccceeeecCCCceeecccccccccc
Q 013212 3 ECISVHIGQAGIQVGNACWELYCLEHGIQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQL 82 (447)
Q Consensus 3 Eii~iq~Gq~gn~ig~~fw~~l~~e~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~~~~~~~~~~ 82 (447)
.|..|.+|++|+.|.+.+++. + +.++.||++.+-+.... ...
T Consensus 4 ki~VvGvGGAG~Nii~rL~~~----------------------------G------a~~iAiNTD~q~L~~~k--~~~-- 45 (315)
T 3r4v_A 4 KVCLIFAGGTGMNVATKLVDL----------------------------G------EAVHCFDTCDKNVVDVH--RSV-- 45 (315)
T ss_dssp SCEEEEEHHHHHHHHGGGGGG----------------------------G------GGEEEEESSSTTCCGGG--GGS--
T ss_pred eEEEEEEcCcchHHHHHHHHc----------------------------C------CCEEEEECchHHhhhhh--hhc--
Confidence 567789999999999776543 1 46688888777542221 110
Q ss_pred CCcceeecCCCCcCCCccccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcce
Q 013212 83 FHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSK 162 (447)
Q Consensus 83 ~~~~~~~~~~~g~gnn~a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~~ 162 (447)
.-.+..+..|+|.+ ...|.+..++..+.|++.++.+|- +++++++|||||+|.++.+++.+++. ...+
T Consensus 46 --~~~i~~gglGAGgd-----pe~g~e~a~e~~~eI~~~l~~aD~---VFVtaGLGGGTGTGaAPVvAeiake~--Galv 113 (315)
T 3r4v_A 46 --NVTLTKGTRGAGGN-----RKVILPLVRPQIPALMDTIPEADF---YIVCYSLGGGSGSVLGPLITGQLADR--KASF 113 (315)
T ss_dssp --EEEECTTCCC---C-----HHHHHHHHGGGHHHHHHTSCCBSC---EEEEEESSSSSHHHHHHHHHHHHHHT--TCCE
T ss_pred --ceeeecccCCCCCC-----hHHHHHHHHhhHHHHHHhcCCCCE---EEEEeccCCccccchHHHHHHHHHHc--CCCE
Confidence 11112333466655 556777777777788888887664 49999999999999999999999997 3367
Q ss_pred eEEEEecCCCCCCccchhhHHHHHHHHhhccCCeeeeecchhHHhhhhccCCCCCCCccchhHHHHHHhhhccccc
Q 013212 163 LGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASL 238 (447)
Q Consensus 163 ~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~ 238 (447)
+++++.|... ........|++-+|..|.+.+|.+|+++ +... .+...++.+|+.++..|..+..-+
T Consensus 114 VavVt~~~E~-~~~~~Nai~al~~LE~La~~~dt~Iv~d---~Len------~~~lp~~~lN~eia~rL~al~~l~ 179 (315)
T 3r4v_A 114 VSFVVGAMES-TDNLGNDIDTMKTLEAIAVNKHLPIVVN---YVPN------TQGRSYESINDEIAEKIRKVVLLV 179 (315)
T ss_dssp EEEEEECCSS-HHHHHHHHHHHHHHHHHHHHHTSCEEEE---EEEC------CTTCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEecCCCc-chhhhchHHHHHHHHHHHhccCCcEEEe---cccc------CCCCchHHHHHHHHHHHHHHHHHh
Confidence 7777877321 1122222346778999999999999997 2221 235567999999999988775543
No 18
>2e4h_B Tubulin alpha-ubiquitous chain; cytoskeleton, CAP-Gly, complex structure, solution structure, CLIP, structural protein; NMR {Homo sapiens}
Probab=97.69 E-value=3e-05 Score=50.49 Aligned_cols=36 Identities=78% Similarity=1.218 Sum_probs=28.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCC
Q 013212 412 GEFSEAREDLAALEKDYEEVGAESAEGEDGDEGDEY 447 (447)
Q Consensus 412 ~eF~ea~~~l~~li~~Y~~~~~~~~~~~~~~~~~~~ 447 (447)
++|.||+++|.+|+.+|+++..+..+++++++++|+
T Consensus 1 ~EFsEA~edl~~L~~dYee~~~~~~e~~~~~~~~~~ 36 (36)
T 2e4h_B 1 GEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY 36 (36)
T ss_pred CcchHHHHHHHHHHHHHHHHhccccccccccccccC
Confidence 589999999999999999998776655444555654
No 19
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=69.58 E-value=3.3 Score=34.98 Aligned_cols=30 Identities=17% Similarity=0.257 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhhcCCCcceeEEeeCCCCc
Q 013212 111 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGT 141 (447)
Q Consensus 111 ~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGt 141 (447)
.+.+.++++..+++.|. +|++|+.++-|||
T Consensus 45 ~~~~~~~i~~~i~~~~~-~gvliLtDl~GGS 74 (142)
T 3bed_A 45 LSGTQAKLAAILKEAGN-VPTLVLADLXGGT 74 (142)
T ss_dssp HHHHHHHHHHHHHHHCS-CCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCC-CCEEEEEECCCCH
Confidence 45678889999999999 9999999998876
No 20
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=69.34 E-value=7.2 Score=32.43 Aligned_cols=31 Identities=13% Similarity=0.256 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhhcCCCcceeEEeeCCCCc
Q 013212 111 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGT 141 (447)
Q Consensus 111 ~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGt 141 (447)
.+++.++++..+++.|.-+|++++.|+-|||
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvliLtDl~GGS 71 (135)
T 1pdo_A 41 AETLIEKYNAQLAKLDTTKGVLFLVDTWGGS 71 (135)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEECCCCC
Confidence 4567888999999998888999999998876
No 21
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=60.70 E-value=6 Score=33.53 Aligned_cols=32 Identities=9% Similarity=0.249 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhhc-CCCcceeEEeeCCCCcc
Q 013212 111 VDLCLDRIRKLADNC-TGLQGFLVFNAVGGGTG 142 (447)
Q Consensus 111 ~e~~~d~ir~~~E~c-D~lqgf~i~~sl~GGtG 142 (447)
.+++.++++..+++. |.-+|++|+.|+.|||=
T Consensus 43 ~~~~~~~i~~~i~~~~~~~~gvliLtDl~GGSp 75 (144)
T 3lfh_A 43 IEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGSP 75 (144)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEESSSSSHH
T ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCCH
Confidence 356778888888888 87889999999998874
No 22
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=53.52 E-value=6.8 Score=33.84 Aligned_cols=31 Identities=10% Similarity=0.118 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhhcCCCcceeEEeeCCCCcc
Q 013212 112 DLCLDRIRKLADNCTGLQGFLVFNAVGGGTG 142 (447)
Q Consensus 112 e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtG 142 (447)
+++.++++..+++.|.-+|++|+.++-|||=
T Consensus 61 ~~~~~~~~~~i~~~~~~~gVLiLtDl~GGSP 91 (159)
T 3mtq_A 61 VDLTQQVEALVARFPAQDELIVITDIFAGSV 91 (159)
T ss_dssp SCHHHHHHHHHHTSCTTSEEEEEESCTTSHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeCCCCCH
Confidence 4577888999999998899999999999873
No 23
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=52.47 E-value=11 Score=32.14 Aligned_cols=32 Identities=19% Similarity=0.179 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhhcCCCcceeEEeeCCCCcc
Q 013212 111 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTG 142 (447)
Q Consensus 111 ~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtG 142 (447)
.+.+.++++..+++.|.-+|++++.++-|||=
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvlvLtDl~GGSp 72 (150)
T 3ipr_A 41 VQALGGQIKTAIENVQQGDGVLVMVDLLSASP 72 (150)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEEESSTTSHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCH
Confidence 45677888888888888899999999998873
No 24
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=50.87 E-value=19 Score=29.82 Aligned_cols=39 Identities=15% Similarity=0.407 Sum_probs=29.8
Q ss_pred hHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHH
Q 013212 110 IVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLL 150 (447)
Q Consensus 110 ~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~ 150 (447)
-.+++.++++..+++.|.-+|++++.|+ ||=+-++..+.
T Consensus 43 ~~~~~~~~i~~~i~~~d~~~GVLiL~Dm--GSp~n~a~~l~ 81 (130)
T 3gx1_A 43 EVKAMYEKLKQTVVKLNPVKGVLILSDM--GSLTSFGNILT 81 (130)
T ss_dssp CHHHHHHHHHHHHHTSCCTTCEEEEECS--GGGGTHHHHHH
T ss_pred CHHHHHHHHHHHHHhhCCCCCEEEEEeC--CCHHHHHHHHH
Confidence 3567889999999999999999999999 44444444443
No 25
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=46.70 E-value=83 Score=27.41 Aligned_cols=112 Identities=11% Similarity=0.028 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHhh-cCCCcce-eEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEEEecCCCCCCccchhhHHHHHHH
Q 013212 111 VDLCLDRIRKLADN-CTGLQGF-LVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 188 (447)
Q Consensus 111 ~e~~~d~ir~~~E~-cD~lqgf-~i~~sl~GGtGSG~~s~l~e~l~deyp~~~~~~~~v~P~~~~~~~~~~~yN~~lsl~ 188 (447)
...+...|++.+++ .+ +|+ -++.+...|+- -++..++-.++.+||.. -..+|+|+....+.- .+-| -..+.
T Consensus 25 ~~~ik~~L~~~l~~l~~--~G~~~~isgga~G~D-~~aae~vl~lk~~y~~i--~L~~v~Pf~~~~~~w-~~~~-~~~y~ 97 (181)
T 2nx2_A 25 LYYIKKAIKNRLIAFLD--EGLEWILISGQLGVE-LWAAEAAYDLQEEYPDL--KVAVITPFYEQEKNW-KEPN-KEQYE 97 (181)
T ss_dssp HHHHHHHHHHHHHHHHT--TTCCEEEECCCTTHH-HHHHHHHHTTTTTCTTC--EEEEEESSBCTTTTS-CHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHh--CCCcEEEECCCccHH-HHHHHHHHHhccccCCc--eEEEEecccchhhCC-CHHH-HHHHH
Confidence 34455555554444 22 254 44444444443 23555555567788744 345677876544322 2223 34677
Q ss_pred HhhccCCeeeeecchhHHhhhhccCCCCCCCccchhHHHHHHhhhccccc
Q 013212 189 SLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASL 238 (447)
Q Consensus 189 ~l~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~ 238 (447)
.|.+.||-+..+...... ....|..-|+.+...-+.+.+-+
T Consensus 98 ~ll~~aD~v~~l~~~~y~---------~~~~~~~rn~~mvd~sD~liavy 138 (181)
T 2nx2_A 98 AVLAQADYEASLTHRPYE---------SPLQFKQKNQFFIDKSDGLLLLY 138 (181)
T ss_dssp HHHHHCSEEEESSSSBCC---------CHHHHHHHHHHHHHHSSEEEEEC
T ss_pred HHHHhCCeEEecccCCCC---------CHHHHHHHHHHHHHHCCEEEEEE
Confidence 888889988877433210 01134566777777666665554
No 26
>3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum}
Probab=41.69 E-value=19 Score=33.41 Aligned_cols=62 Identities=19% Similarity=0.203 Sum_probs=41.8
Q ss_pred ccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEE
Q 013212 101 RGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT 166 (447)
Q Consensus 101 ~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~~~~~~ 166 (447)
.|++..-..+.+.+.+.|++.+++.....=++.=||||| +++..+.-.|+..+|...+..+.
T Consensus 97 ~GF~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~~~~~~~v~~~t 158 (258)
T 3g7n_A 97 RGVHRPWSAVHDTIITEVKALIAKYPDYTLEAVGHSLGG----ALTSIAHVALAQNFPDKSLVSNA 158 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHH----HHHHHHHHHHHHHCTTSCEEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeccCHHH----HHHHHHHHHHHHhCCCCceeEEE
Confidence 444433345667778888888887766665667789865 46677777788888876654443
No 27
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=41.49 E-value=6.6 Score=32.79 Aligned_cols=28 Identities=18% Similarity=0.272 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhhcCCCcceeEEeeCCCCc
Q 013212 113 LCLDRIRKLADNCTGLQGFLVFNAVGGGT 141 (447)
Q Consensus 113 ~~~d~ir~~~E~cD~lqgf~i~~sl~GGt 141 (447)
...++|+..+++.|.=+|++++.|+ |||
T Consensus 49 ~~~~~i~~ai~~~~~~dgVlvltDL-Ggs 76 (135)
T 3b48_A 49 SDPMKIIDTINEADSDREFLIFADL-GSA 76 (135)
T ss_dssp CCHHHHHHHHHHSCSSCEEEEEECS-HHH
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEeC-CCC
Confidence 3456788888888877899999999 665
No 28
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=41.36 E-value=50 Score=31.84 Aligned_cols=97 Identities=14% Similarity=0.172 Sum_probs=56.3
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEEEecCCCC-CCccchhhHHH
Q 013212 106 IGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV-STSVVEPYNSV 184 (447)
Q Consensus 106 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~~~~~~v~P~~~~-~~~~~~~yN~~ 184 (447)
...+.+..+.+.|+..+++ +..+||+|+|+.+ |= -.++..++.+-+ .+|-.+++=+-.|.... ++.....++++
T Consensus 65 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--Tm-eeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (332)
T 2wlt_A 65 MNEEIWFKLAQRAQELLDD-SRIQGVVITHGTD--TL-EESAYFLNLVLH-STKPVVLVGAMRNASSLSADGALNLYEAV 139 (332)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCSS--SH-HHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCch--hH-HHHHHHHHHHhC-CCCCEEEECCCCCCCCCCcchHHHHHHHH
Confidence 4567777788888877754 4688999999876 52 467777776654 44434455556777642 34444445555
Q ss_pred HHHHHhhccCCeeeeecchhHHh
Q 013212 185 LSTHSLLEHTDVAVLLDNEAIYD 207 (447)
Q Consensus 185 lsl~~l~e~sd~~i~~dN~~l~~ 207 (447)
..-..-...--.|+++=|+.++.
T Consensus 140 ~~A~~~~~~~~GV~V~fn~~i~~ 162 (332)
T 2wlt_A 140 SVAVNEKSANKGVLVVMDDTIFS 162 (332)
T ss_dssp HHHHCGGGTTSCSEEEETTEEEE
T ss_pred HHHhCcccCCCeEEEEECCEEee
Confidence 43322110112455555666654
No 29
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=40.25 E-value=10 Score=31.54 Aligned_cols=27 Identities=19% Similarity=0.386 Sum_probs=20.9
Q ss_pred HHHHHHHHHHhhcCCCcceeEEeeCCCCc
Q 013212 113 LCLDRIRKLADNCTGLQGFLVFNAVGGGT 141 (447)
Q Consensus 113 ~~~d~ir~~~E~cD~lqgf~i~~sl~GGt 141 (447)
...++|+..+++.| =+|++++.|+ |||
T Consensus 44 ~~~~~i~~ai~~~~-~dgVlvltDL-Ggs 70 (131)
T 3ct6_A 44 TSFDRVMNAIEENE-ADNLLTFFDL-GSA 70 (131)
T ss_dssp CCHHHHHHHHHHSS-CSEEEEEESS-GGG
T ss_pred HHHHHHHHHHHhCC-CCCEEEEEeC-CCC
Confidence 34577788888887 4899999999 654
No 30
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=39.26 E-value=50 Score=31.78 Aligned_cols=97 Identities=11% Similarity=0.115 Sum_probs=56.3
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEEEecCCCC-CCccchhhHHH
Q 013212 106 IGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV-STSVVEPYNSV 184 (447)
Q Consensus 106 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~~~~~~v~P~~~~-~~~~~~~yN~~ 184 (447)
...+.+..+.+.|+..+++ +..+||+|+|+.+ |= -.++..++.+-+ .+|-.+++=+-.|.... ++.....++++
T Consensus 65 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--Tm-eeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (327)
T 1o7j_A 65 MTGDVVLKLSQRVNELLAR-DDVDGVVITHGTD--TV-EESAYFLHLTVK-SDKPVVFVAAMRPATAISADGPMNLLEAV 139 (327)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCST--TH-HHHHHHHHHHCC-CCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCch--hH-HHHHHHHHHHhC-CCCCEEEeCCCCCCCCCCCchHHHHHHHH
Confidence 4567777788888887754 4688999999876 52 467777776654 44433445556777642 34444445555
Q ss_pred HHHHHhhccCCeeeeecchhHHh
Q 013212 185 LSTHSLLEHTDVAVLLDNEAIYD 207 (447)
Q Consensus 185 lsl~~l~e~sd~~i~~dN~~l~~ 207 (447)
..-..-...--.|+++=|+.++.
T Consensus 140 ~~A~~~~~~~~GV~V~fn~~i~~ 162 (327)
T 1o7j_A 140 RVAGDKQSRGRGVMVVINDRIGS 162 (327)
T ss_dssp HHHHCGGGTTSCCEEEETTEEEE
T ss_pred HHHhCcCCCCCceEEEECCEEee
Confidence 33222110112455555666654
No 31
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=37.43 E-value=53 Score=31.63 Aligned_cols=97 Identities=13% Similarity=0.112 Sum_probs=55.8
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEEEecCCCC-CCccchhhHHH
Q 013212 106 IGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV-STSVVEPYNSV 184 (447)
Q Consensus 106 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~~~~~~v~P~~~~-~~~~~~~yN~~ 184 (447)
...+.+..+.+.|+..+++ +..+||+|+|+.+ |= -.++..++.+-+ .+|-.+++=+-.|.... ++.....++++
T Consensus 63 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--Tm-eeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 137 (330)
T 1wsa_A 63 MTGKVWLKLAKRVNELLAQ-KETEAVIITHGTD--TM-EETAFFLNLTVK-SQKPVVLVGAMRPGSSMSADGPMNLYNAV 137 (330)
T ss_dssp CCHHHHHHHHHHHHHHHHS-TTCCCEEEECCSS--SH-HHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEEcCcc--hH-HHHHHHHHHHcC-CCCCEEEeCCCCCCCCCCCchHHHHHHHH
Confidence 4567777888888887764 4688999999876 52 466777776654 44433455556777642 34444444444
Q ss_pred HHHHHhhccCCeeeeecchhHHh
Q 013212 185 LSTHSLLEHTDVAVLLDNEAIYD 207 (447)
Q Consensus 185 lsl~~l~e~sd~~i~~dN~~l~~ 207 (447)
..-..-...--.|+++=|+.++.
T Consensus 138 ~~A~~~~~~~~GV~V~fn~~i~~ 160 (330)
T 1wsa_A 138 NVAINKASTNKGVVIVMNDEIHA 160 (330)
T ss_dssp HHHTCGGGTTSCSEEEETTEEEE
T ss_pred HHHhCcccCCCeEEEEECCEEee
Confidence 32211100112455555666654
No 32
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=37.12 E-value=33 Score=28.64 Aligned_cols=39 Identities=18% Similarity=0.338 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHHHhh--cCCCcceeEEeeCCCCcccCchHHHH
Q 013212 110 IVDLCLDRIRKLADN--CTGLQGFLVFNAVGGGTGSGLGSLLL 150 (447)
Q Consensus 110 ~~e~~~d~ir~~~E~--cD~lqgf~i~~sl~GGtGSG~~s~l~ 150 (447)
-.+++.++++..+++ .|.-+|++++.|+ ||=+-++..+.
T Consensus 43 ~~~~~~~~i~~~i~~~~~d~g~GVLiL~Dm--GSp~n~a~~l~ 83 (139)
T 3gdw_A 43 EVQTMYEQLRNQVITQKESLNNGILLLTDM--GSLNSFGNMLF 83 (139)
T ss_dssp CHHHHHHHHHHHHHTSTGGGTTCEEEEECS--GGGGGHHHHHH
T ss_pred CHHHHHHHHHHHHHhhcCCCCCCEEEEEeC--CCHHHHHHHHH
Confidence 346788899999988 7788999999999 44334444433
No 33
>3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A*
Probab=35.83 E-value=29 Score=32.61 Aligned_cols=64 Identities=9% Similarity=0.137 Sum_probs=40.4
Q ss_pred cccccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEEE
Q 013212 100 ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 167 (447)
Q Consensus 100 a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~~~~~~v 167 (447)
..|++..-..+.+.+.+.|++.+++.....=++.=||||| +++..+.-.|+..+|...+..+..
T Consensus 110 H~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGG----alA~l~a~~l~~~~~~~~~~~~tf 173 (279)
T 3uue_A 110 MHGFQQAYNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGA----AMGLLCAMDIELRMDGGLYKTYLF 173 (279)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHH----HHHHHHHHHHHHHSTTCCSEEEEE
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEcccCHHH----HHHHHHHHHHHHhCCCCceEEEEe
Confidence 3444433345667777888888887665655666789864 366666677777777654444433
No 34
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=33.35 E-value=21 Score=27.85 Aligned_cols=53 Identities=26% Similarity=0.541 Sum_probs=39.1
Q ss_pred eecCcchHHHHHHHH-------HHHHHhhccccceecccccccCh--hhHHHHHHHHHHHHHHHHHH
Q 013212 374 ISNSTSVAEVFSRID-------HKFDLMYAKRAFVHWYVGEGMEE--GEFSEAREDLAALEKDYEEV 431 (447)
Q Consensus 374 l~N~t~i~~~l~~l~-------~~~~~m~~rkAflh~Y~~~Gmee--~eF~ea~~~l~~li~~Y~~~ 431 (447)
++|.++|..+|..|- +.-..+-.+|.|. +|+.+ ....||+..|..|-+++++=
T Consensus 30 i~nDssVQsLF~~lt~MH~~Ll~~i~~~ee~R~~y-----E~LQDkL~qi~eAR~ALdaLR~eH~~K 91 (98)
T 3f1i_H 30 ITNDSAVLSLFQSINGMHPQLLELLNQLDERRLYY-----EGLQDKLAQIRDARGALSALREEHREK 91 (98)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678888888887654 4455555556443 67844 68999999999999999753
No 35
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=31.38 E-value=82 Score=30.40 Aligned_cols=96 Identities=19% Similarity=0.158 Sum_probs=52.9
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEEEecCCCC-CCccchhhHHH
Q 013212 106 IGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV-STSVVEPYNSV 184 (447)
Q Consensus 106 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~~~~~~v~P~~~~-~~~~~~~yN~~ 184 (447)
...+.+..+.+.|+..++ +..+||+|+|+.+ |= -.++..++.+- ..+|-.+++=+-.|.... ++.....++++
T Consensus 69 m~~~~~~~la~~i~~~~~--~~~dGvVItHGTD--Tm-~~TA~~L~~~l-~~~kPVVlTGa~rp~~~~~sDg~~NL~~Av 142 (334)
T 3nxk_A 69 MCDEIWLRLAKKIAKLFA--EGIDGVVITHGTD--TM-EETAYFLNLTI-KSDKPVVLVGAMRPSTAISADGPKNLYNAV 142 (334)
T ss_dssp CCHHHHHHHHHHHHHHHH--TTCCEEEEECCST--TH-HHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhh--cCCCeEEEECCCc--hH-HHHHHHHHHHc-CCCCCEEEECCCCCCCCCCchHHHHHHHHH
Confidence 345666667777777664 6789999999876 42 34566666544 344444555566787543 24444444444
Q ss_pred HHHHHhhccCCeeeeecchhHHh
Q 013212 185 LSTHSLLEHTDVAVLLDNEAIYD 207 (447)
Q Consensus 185 lsl~~l~e~sd~~i~~dN~~l~~ 207 (447)
..-..-.-.--.|+++=|+.++.
T Consensus 143 ~~A~~~~a~~~GV~v~f~~~i~~ 165 (334)
T 3nxk_A 143 ALVVNKEAKNKGVMVAINDKILS 165 (334)
T ss_dssp HHHHSGGGTTSCSEEEETTEEEE
T ss_pred HHHhCcccCCCeEEEEECCEEEe
Confidence 33322111112455555666654
No 36
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=30.71 E-value=98 Score=30.13 Aligned_cols=94 Identities=16% Similarity=0.222 Sum_probs=57.3
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEEEecCCCC-CCccchhhHHH
Q 013212 106 IGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV-STSVVEPYNSV 184 (447)
Q Consensus 106 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~~~~~~v~P~~~~-~~~~~~~yN~~ 184 (447)
...+.+..+.+.|+..++ ..+||+|+|+.+ | =-.++..++.+-+..+|-.+++=+-.|.... ++.....++++
T Consensus 83 mt~~~w~~la~~I~~~~~---~~dG~VItHGTD--T-meeTA~~Ls~~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 156 (358)
T 2him_A 83 MTPEDWQHIAEDIKAHYD---DYDGFVILHGTD--T-MAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNAL 156 (358)
T ss_dssp CCHHHHHHHHHHHHHHGG---GCSEEEEECCST--T-HHHHHHHHHHHEETCCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHh---cCCeEEEecCch--H-HHHHHHHHHHHHhcCCCCEEEeCCCCCCcCCCcchHHHHHHHH
Confidence 456677777788877766 377999999876 5 2467777777655444544555566787643 34444455555
Q ss_pred HHHHHhhccCCeeeeecchhHHh
Q 013212 185 LSTHSLLEHTDVAVLLDNEAIYD 207 (447)
Q Consensus 185 lsl~~l~e~sd~~i~~dN~~l~~ 207 (447)
..-.. .+ +-.|+++=|+.++.
T Consensus 157 ~~A~~-~~-~~GV~V~fn~~i~~ 177 (358)
T 2him_A 157 YVAAN-YP-INEVTLFFNNRLYR 177 (358)
T ss_dssp HHHHH-SC-CSSEEEEETTEEEE
T ss_pred HHHhC-CC-CCCeEEEECCEEee
Confidence 43322 22 23555555666654
No 37
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=30.52 E-value=80 Score=30.31 Aligned_cols=95 Identities=15% Similarity=0.210 Sum_probs=55.1
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEEEecCCCC-CCccchhhHHH
Q 013212 106 IGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV-STSVVEPYNSV 184 (447)
Q Consensus 106 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~~~~~~v~P~~~~-~~~~~~~yN~~ 184 (447)
...+.+..+.+.|+..+++. +||+|+|+.+ |= -.++..++.+- ..+|-.+++=+-.|.... ++.....++++
T Consensus 61 mt~~~w~~la~~I~~~~~~~---dG~VItHGTD--Tm-eeTA~~Ls~~l-~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 133 (326)
T 1nns_A 61 MNDNVWLTLAKKINTDCDKT---DGFVITHGTD--TM-EETAYFLDLTV-KCDKPVVMVGAMRPSTSMSADGPFNLYNAV 133 (326)
T ss_dssp CCHHHHHHHHHHHHHHGGGC---SEEEEECCSS--SH-HHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhcC---CcEEEEcCch--hH-HHHHHHHHHhc-CCCCCEEEeCCCCCCcCCCCchHHHHHHHH
Confidence 45677778888888877653 8999999876 52 46677777665 344444455556777642 34444445555
Q ss_pred HHHHHhhccCCeeeeecchhHHh
Q 013212 185 LSTHSLLEHTDVAVLLDNEAIYD 207 (447)
Q Consensus 185 lsl~~l~e~sd~~i~~dN~~l~~ 207 (447)
..-..-...--.|+++=|+.++.
T Consensus 134 ~~A~~~~~~~~GV~v~fn~~i~~ 156 (326)
T 1nns_A 134 VTAADKASANRGVLVVMNDTVLD 156 (326)
T ss_dssp HHHHCGGGTTSCSEEEETTEEEE
T ss_pred HHHcCcccCCCceEEEECCEEee
Confidence 43322111112455555666654
No 38
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=29.58 E-value=71 Score=29.40 Aligned_cols=59 Identities=15% Similarity=0.272 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEEEecCC
Q 013212 112 DLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSP 171 (447)
Q Consensus 112 e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~~~~~~v~P~~ 171 (447)
+-+.+.+...++.......=.-+-++|.||| .++..++..+...+|...+...+|-|+.
T Consensus 34 ~~~~~~l~~~l~~~~~~~~~~~VLDiG~GtG-~~~~~~l~~l~~~~~~~~v~~~~vD~S~ 92 (292)
T 2aot_A 34 EFMDKKLPGIIGRIGDTKSEIKILSIGGGAG-EIDLQILSKVQAQYPGVCINNEVVEPSA 92 (292)
T ss_dssp HHHHHTHHHHSSSTTTTCSEEEEEEETCTTS-HHHHHHHHHHHHHSTTCEEEEEEECSCH
T ss_pred HHHHHhchhHHhhccCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhCCCceeeEEEEeCCH
Confidence 3344455555554432222245778888886 4666688888777776644446776653
No 39
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=28.99 E-value=70 Score=30.77 Aligned_cols=94 Identities=11% Similarity=-0.037 Sum_probs=56.8
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEEEecCCCC-CCccchhhHHH
Q 013212 106 IGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV-STSVVEPYNSV 184 (447)
Q Consensus 106 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~~~~~~v~P~~~~-~~~~~~~yN~~ 184 (447)
...+.+..+.+.|+..++ ..+||+|+|+.+ | =-.++..++.+-...+|-.+++=+-.|.... ++.....++++
T Consensus 55 mt~~~w~~la~~I~~~~~---~~dG~VItHGTD--T-meeTA~~Ls~ll~~~~kPVVlTGAqrP~~~~~sDg~~NL~~Av 128 (328)
T 1wls_A 55 IQPSDWERLAKEIEKEVW---EYDGIVITHGTD--T-MAYSASMLSFMLRNPPIPIVLTGSMLPITEKNSDAPFNLRTAL 128 (328)
T ss_dssp CCHHHHHHHHHHHHHHTT---TCSEEEEECCGG--G-HHHHHHHHHHHEESCSSEEEEECCSSCTTSSSCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhc---cCCeEEEEcCCc--h-HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCCCchHHHHHHHH
Confidence 456777777788877765 478999999876 5 2467777775434444544555566787643 34444444444
Q ss_pred HHHHHhhccCCeeeeecchhHHhh
Q 013212 185 LSTHSLLEHTDVAVLLDNEAIYDI 208 (447)
Q Consensus 185 lsl~~l~e~sd~~i~~dN~~l~~~ 208 (447)
..-.. ..+ .|.++=|+.++.-
T Consensus 129 ~~A~~--~~~-GV~V~fn~~i~~a 149 (328)
T 1wls_A 129 EFVKL--GIR-GIYIAFNGKVMLG 149 (328)
T ss_dssp HHHTT--TCC-EEEEEETTEEEEG
T ss_pred HHHhC--CCC-CeEEEECCEEeec
Confidence 33221 223 6666667777643
No 40
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=27.36 E-value=1.2e+02 Score=30.55 Aligned_cols=91 Identities=16% Similarity=0.074 Sum_probs=55.3
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEEEecCCCC-CCccchhhHHH
Q 013212 106 IGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV-STSVVEPYNSV 184 (447)
Q Consensus 106 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~~~~~~v~P~~~~-~~~~~~~yN~~ 184 (447)
...+.+..+.+.|+..+++ ..+||+|+|+.+ |= -.++..++.+-+..++-.+++=+-.|.... ++.....++++
T Consensus 149 mtp~~w~~La~~I~~~~~~--~~DG~VItHGTD--TM-eeTA~~Lsl~l~~~~KPVVlTGAqrP~~~~~sDg~~NL~~Av 223 (438)
T 1zq1_A 149 MKPKHWVKIAHEVAKALNS--GDYGVVVAHGTD--TM-GYTAAALSFMLRNLGKPVVLVGAQRSSDRPSSDAAMNLICSV 223 (438)
T ss_dssp CCHHHHHHHHHHHHHHHHT--TCSEEEEECCSS--SH-HHHHHHHHHHEESCCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc--CCCeEEEecCch--hH-HHHHHHHHHHHhCCCCCEEEeCCCCCCCCCCcchHHHHHHHH
Confidence 3456667777888877763 588999999876 63 467777777654555544556666787643 34444444444
Q ss_pred HHHHHhhccCCeeeeecchh
Q 013212 185 LSTHSLLEHTDVAVLLDNEA 204 (447)
Q Consensus 185 lsl~~l~e~sd~~i~~dN~~ 204 (447)
..-. ...+ .|+++=|+.
T Consensus 224 ~~A~--~~~~-GV~Vvfn~~ 240 (438)
T 1zq1_A 224 RMAT--SEVA-EVMVVMHGE 240 (438)
T ss_dssp HHHT--SSBC-SEEEEEESS
T ss_pred HHHc--CCCC-CeEEEECCc
Confidence 3322 2333 455554555
No 41
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=26.26 E-value=25 Score=33.16 Aligned_cols=34 Identities=29% Similarity=0.456 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHH
Q 013212 111 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER 152 (447)
Q Consensus 111 ~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~ 152 (447)
.+++++++|..+++=..+ +|+|.|+|+++...|.
T Consensus 13 r~~il~~l~~~i~~~~~i--------ig~gaGtGlsAk~~e~ 46 (286)
T 2p10_A 13 RSELVDRFQKKIRAGEPI--------IGGGAGTGLSAKSEEA 46 (286)
T ss_dssp HHHHHHHHHHHHHTTCCE--------EEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCce--------EEEecccchhhHHHHh
Confidence 468899999999986655 6778899999888754
No 42
>2ful_A EIF-5, eukaryotic translation initiation factor 5; atypical heat motif; 1.50A {Saccharomyces cerevisiae}
Probab=25.64 E-value=34 Score=29.92 Aligned_cols=51 Identities=6% Similarity=0.046 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHH--Hhhccccceecccccc---cChhhHHHHHHHHHHHHHHHHHH
Q 013212 381 AEVFSRIDHKFD--LMYAKRAFVHWYVGEG---MEEGEFSEAREDLAALEKDYEEV 431 (447)
Q Consensus 381 ~~~l~~l~~~~~--~m~~rkAflh~Y~~~G---mee~eF~ea~~~l~~li~~Y~~~ 431 (447)
...|-.|+..+. .+..-.|++.||.+.. .+......++..+..++.==++.
T Consensus 105 ~~~~~~IL~~LYd~DIleEeaIl~W~~~~skk~v~~e~~~~v~~~~~pFI~WL~eA 160 (177)
T 2ful_A 105 IPLLPKILVQLYNNDIISEEEIMRFGTKSSKKFVPKEVSKKVRRAAKPFITWLETA 160 (177)
T ss_dssp GGGHHHHHHHHHHTTSSCHHHHHHHHHCCCSSSSCHHHHHHHHHTTHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccchhhhHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHcc
Confidence 344455555543 3678889999997632 34444555666666666555444
No 43
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=25.58 E-value=56 Score=31.45 Aligned_cols=97 Identities=15% Similarity=0.181 Sum_probs=55.4
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEEEecCCCC-CCccchhhHHH
Q 013212 106 IGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV-STSVVEPYNSV 184 (447)
Q Consensus 106 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~~~~~~v~P~~~~-~~~~~~~yN~~ 184 (447)
...+.+..+.+.|+..+++ +..+||+|+|+.+ |= -.++..++.+-+ .+|-.+++=+-.|.... ++.....++++
T Consensus 62 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--Tm-eeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 136 (331)
T 1agx_A 62 ITDKELLSLARQVNDLVKK-PSVNGVVITHGTD--TM-EETAFFLNLVVH-TDKPIVLVGSMRPSTALSADGPLNLYSAV 136 (331)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCGG--GH-HHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCcc--hH-HHHHHHHHHHcC-CCCCEEEeCCCCCCCCCCchhHHHHHHHH
Confidence 4567777788888887754 4688999999876 52 456777776654 44433445556777643 34444444444
Q ss_pred HHHHHhhccCCeeeeecchhHHh
Q 013212 185 LSTHSLLEHTDVAVLLDNEAIYD 207 (447)
Q Consensus 185 lsl~~l~e~sd~~i~~dN~~l~~ 207 (447)
..-..-...--.|+++=|+.++.
T Consensus 137 ~~A~~~~~~~~GV~V~fn~~i~~ 159 (331)
T 1agx_A 137 ALASSNEAKNKGVMVLMNDSIFA 159 (331)
T ss_dssp HHHTCTTCTTSCEEEEETTEEEE
T ss_pred HHHhCcCCCCCeEEEEECCEEee
Confidence 32211100112455555666654
No 44
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=22.55 E-value=1.3e+02 Score=30.12 Aligned_cols=90 Identities=14% Similarity=-0.002 Sum_probs=54.5
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEEEEecCCCC-CCccchhhHHH
Q 013212 106 IGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV-STSVVEPYNSV 184 (447)
Q Consensus 106 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~~~~~~v~P~~~~-~~~~~~~yN~~ 184 (447)
...+.+..+.+.|+..+++ ..+||+|+|+.+ |= -.++..++.+- ..++-.+++=+-.|.... ++.....++++
T Consensus 148 mtp~~w~~La~~I~~~~~~--~~DG~VItHGTD--TM-eeTA~~Lsl~l-~~~KPVVlTGAqrP~~~~~sDg~~NL~~Av 221 (435)
T 2d6f_A 148 MKPEYWVETARAVYGEIKD--GADGVVVAHGTD--TM-HYTSAALSFML-RTPVPVVFTGAQRSSDRPSSDASLNIQCSV 221 (435)
T ss_dssp CCHHHHHHHHHHHHHHHHT--TCSEEEEECCTT--TH-HHHHHHHHHHE-ECSSCEEEECCSSCTTSTTCTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc--CCCeEEEEcCcc--hH-HHHHHHHHHHh-CCCCCEEEECCCCCCCCCCcchHHHHHHHH
Confidence 3456677777888877763 588999999876 52 46677777665 444544555566787643 34444445555
Q ss_pred HHHHHhhccCCeeeeecchh
Q 013212 185 LSTHSLLEHTDVAVLLDNEA 204 (447)
Q Consensus 185 lsl~~l~e~sd~~i~~dN~~ 204 (447)
..-.. ..+ .|+++=|+.
T Consensus 222 ~~A~~--~~~-GV~Vvfn~~ 238 (435)
T 2d6f_A 222 RAATS--EIA-EVTVCMHAT 238 (435)
T ss_dssp HHHHS--SCC-SEEEEEESS
T ss_pred HHHcC--CCC-CeEEEECCc
Confidence 43322 334 455555555
No 45
>3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0
Probab=21.17 E-value=44 Score=31.71 Aligned_cols=60 Identities=12% Similarity=0.078 Sum_probs=36.3
Q ss_pred cccccchhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhhhcCCcceeEE
Q 013212 102 GHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF 165 (447)
Q Consensus 102 G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~deyp~~~~~~~ 165 (447)
|++..-+.+.+.+.+.|++.+++.....=++.=||||| +++..++-.|+...++..+++|
T Consensus 128 GF~~~~~~~~~~i~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~~~~~~~~~tf 187 (301)
T 3o0d_A 128 GFIQSYNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGG----AAALLFGINLKVNGHDPLVVTL 187 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHH----HHHHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCceEEEeccChHH----HHHHHHHHHHHhcCCCceEEee
Confidence 43333345566777788888877665555566788865 4666666667666544433333
No 46
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=20.21 E-value=1.1e+02 Score=26.37 Aligned_cols=41 Identities=20% Similarity=0.240 Sum_probs=25.7
Q ss_pred hhhHHHHHHHHHHHHhhcCCCcceeEEeeCCCCcccCchHHHHHHhhh
Q 013212 108 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 155 (447)
Q Consensus 108 ~~~~e~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSG~~s~l~e~l~d 155 (447)
.+-.+.+.+.|++.+++|| +|+.+ ||+|-|---..-+.+++
T Consensus 46 ~Dd~~~I~~~l~~a~~~~D-----lVitt--GG~g~~~~D~T~ea~a~ 86 (172)
T 3kbq_A 46 MDDLDEIGWAFRVALEVSD-----LVVSS--GGLGPTFDDMTVEGFAK 86 (172)
T ss_dssp CSCHHHHHHHHHHHHHHCS-----EEEEE--SCCSSSTTCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCC-----EEEEc--CCCcCCcccchHHHHHH
Confidence 3556788889999988887 44433 77776543334444433
Done!