BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013214
(447 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 142/256 (55%), Gaps = 12/256 (4%)
Query: 166 GTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM 225
GT A W G VAVK L E+ + RV F E+A+++++RHPN+V F+GAVTQ +
Sbjct: 51 GTVHRAEWHGSDVAVKILMEQDFHAE-RVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109
Query: 226 MIVTEYLPKGDLRAFLKRKGA---LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
IVTEYL +G L L + GA L + A D+A+GMNYLH P PI+HRDL+
Sbjct: 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRDLKSP 168
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFSF 340
N+L D +KV DFG+S+L K L + + ++APEV ++E + K DV+SF
Sbjct: 169 NLLVDKKYTVKVCDFGLSRL---KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSF 225
Query: 341 ALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 400
+IL E+ P+ + +V A + + + P L + + +IE CW +P KR
Sbjct: 226 GVILWELATLQQPWGNLNPAQVVAAVGFKCK-RLEIPRNLNPQ-VAAIIEGCWTNEPWKR 283
Query: 401 PTFRQIITRLESINNS 416
P+F I+ L + S
Sbjct: 284 PSFATIMDLLRPLIKS 299
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 142/253 (56%), Gaps = 12/253 (4%)
Query: 166 GTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM 225
GT A W G VAVK L E+ + RV F E+A+++++RHPN+V F+GAVTQ +
Sbjct: 51 GTVHRAEWHGSDVAVKILMEQDFHAE-RVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109
Query: 226 MIVTEYLPKGDLRAFLKRKGA---LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
IVTEYL +G L L + GA L + A D+A+GMNYLH P PI+HR+L+
Sbjct: 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRNLKSP 168
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFSF 340
N+L D +KV DFG+S+L K L+ + + ++APEV ++E + K DV+SF
Sbjct: 169 NLLVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSF 225
Query: 341 ALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 400
+IL E+ P+ + +V A + + + P L + + +IE CW +P KR
Sbjct: 226 GVILWELATLQQPWGNLNPAQVVAAVGFKCK-RLEIPRNLNPQ-VAAIIEGCWTNEPWKR 283
Query: 401 PTFRQIITRLESI 413
P+F I+ L +
Sbjct: 284 PSFATIMDLLRPL 296
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 145/278 (52%), Gaps = 22/278 (7%)
Query: 147 EYEIDPHELDFTNSVEITKGTFIL---AFWRGI-QVAVKKLGEEVISDDDRVRAFRDELA 202
++ IDP EL F EI G F L +W +VA+K + E +S++D F +E
Sbjct: 2 KWVIDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAE 55
Query: 203 LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIAR 261
++ K+ HP +VQ G + +P+ +VTE++ G L +L+ ++G T + LD+
Sbjct: 56 VMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 115
Query: 262 GMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYV 321
GM YL E +IHRDL N L ++ +KV+DFG+++ + + T ++
Sbjct: 116 GMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA 172
Query: 322 APEVFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPK--AYAARQRPPFKAPA 378
+PEVF Y +K DV+SF +++ E+ EG P+ + ++EV + + R P A
Sbjct: 173 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST 232
Query: 379 KLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 416
+Y +++ CW E+P RP F +++ +L I S
Sbjct: 233 HVY-----QIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 142/275 (51%), Gaps = 22/275 (8%)
Query: 150 IDPHELDFTNSVEITKGTFIL---AFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQ 205
IDP EL F EI G F L +W +VA+K + E +S+DD F +E ++
Sbjct: 24 IDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDD----FIEEAEVMM 77
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIARGMN 264
K+ HP +VQ G + +P+ +V E++ G L +L+ ++G T + LD+ GM
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 137
Query: 265 YLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPE 324
YL E +IHRDL N L ++ +KV+DFG+++ + + T ++ +PE
Sbjct: 138 YLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 194
Query: 325 VFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLY 381
VF Y +K DV+SF +++ E+ EG P+ + ++EV + + R P A +Y
Sbjct: 195 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVY 254
Query: 382 ARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 416
+++ CW E+P RP F +++ +L I S
Sbjct: 255 -----QIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 143/275 (52%), Gaps = 22/275 (8%)
Query: 150 IDPHELDFTNSVEITKGTFIL---AFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQ 205
IDP EL F EI G F L +W +VA+K + E +S++D F +E ++
Sbjct: 4 IDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMM 57
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIARGMN 264
K+ HP +VQ G + +P+ +V E++ G L +L+ ++G T + LD+ GM
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 117
Query: 265 YLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPE 324
YL E +IHRDL N L ++ +KV+DFG+++ + + T ++ +PE
Sbjct: 118 YLEE---ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
Query: 325 VFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLY 381
VF Y +K DV+SF +++ E+ EG P+ + ++EV + + R P A +Y
Sbjct: 175 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVY 234
Query: 382 ARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 416
+++ CW E+P RP F +++ +L +I S
Sbjct: 235 -----QIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 144/278 (51%), Gaps = 22/278 (7%)
Query: 147 EYEIDPHELDFTNSVEITKGTFIL---AFWRGI-QVAVKKLGEEVISDDDRVRAFRDELA 202
++ IDP EL F EI G F L +W +VA+K + E +S++D F +E
Sbjct: 4 KWVIDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAE 57
Query: 203 LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIAR 261
++ K+ HP +VQ G + +P+ +V E++ G L +L+ ++G T + LD+
Sbjct: 58 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 117
Query: 262 GMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYV 321
GM YL E +IHRDL N L ++ +KV+DFG+++ + + T ++
Sbjct: 118 GMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA 174
Query: 322 APEVFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPK--AYAARQRPPFKAPA 378
+PEVF Y +K DV+SF +++ E+ EG P+ + ++EV + + R P A
Sbjct: 175 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST 234
Query: 379 KLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 416
+Y +++ CW E+P RP F +++ +L I S
Sbjct: 235 HVY-----QIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 142/275 (51%), Gaps = 22/275 (8%)
Query: 150 IDPHELDFTNSVEITKGTFIL---AFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQ 205
IDP EL F EI G F L +W +VA+K + E +S++D F +E ++
Sbjct: 4 IDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMM 57
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIARGMN 264
K+ HP +VQ G + +P+ +V E++ G L +L+ ++G T + LD+ GM
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 117
Query: 265 YLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPE 324
YL E +IHRDL N L ++ +KV+DFG+++ + + T ++ +PE
Sbjct: 118 YLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
Query: 325 VFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLY 381
VF Y +K DV+SF +++ E+ EG P+ + ++EV + + R P A +Y
Sbjct: 175 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVY 234
Query: 382 ARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 416
+++ CW E+P RP F +++ +L I S
Sbjct: 235 -----QIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 142/275 (51%), Gaps = 22/275 (8%)
Query: 150 IDPHELDFTNSVEITKGTFIL---AFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQ 205
IDP EL F EI G F L +W +VA+K + E +S++D F +E ++
Sbjct: 2 IDPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMM 55
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIARGMN 264
K+ HP +VQ G + +P+ +V E++ G L +L+ ++G T + LD+ GM
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 115
Query: 265 YLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPE 324
YL E +IHRDL N L ++ +KV+DFG+++ + + T ++ +PE
Sbjct: 116 YLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 172
Query: 325 VFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLY 381
VF Y +K DV+SF +++ E+ EG P+ + ++EV + + R P A +Y
Sbjct: 173 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVY 232
Query: 382 ARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 416
+++ CW E+P RP F +++ +L I S
Sbjct: 233 -----QIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 21/261 (8%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G L W+G VAVK + E +S+D+ F E + K+ HP +V+F G ++ P
Sbjct: 22 GVVKLGKWKGQYDVAVKMIKEGSMSEDE----FFQEAQTMMKLSHPKLVKFYGVCSKEYP 77
Query: 225 MMIVTEYLPKGDLRAFLKRKG-ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSN 283
+ IVTEY+ G L +L+ G L+PS + D+ GM +L ++ IHRDL N
Sbjct: 78 IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARN 134
Query: 284 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS--CRYVAPEVFKNEEYDTKVDVFSFA 341
L D +KV+DFG+++ V +D+ ++ T ++ APEVF +Y +K DV++F
Sbjct: 135 CLVDRDLCVKVSDFGMTRY--VLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFG 192
Query: 342 LILQEMIE-GCPPFTMKHDNEVPKAYAARQR--PPFKAPAKLYARGLKELIEECWNEKPA 398
+++ E+ G P+ + ++EV + R P A +Y +++ CW+E P
Sbjct: 193 ILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIY-----QIMYSCWHELPE 247
Query: 399 KRPTFRQIITRLESINNSINH 419
KRPTF+Q+++ +E + H
Sbjct: 248 KRPTFQQLLSSIEPLREKDKH 268
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 22/261 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGFVHRDLA 174
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+S++L ED P T R+ +PE ++ +
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+S+ ++L E++ G P+ + +V KA R PP PA LY +L+ +C
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QLMLDC 286
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W + RP F QI++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 22/261 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 31 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 88
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 89 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 145
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+S++L ED P T R+ +PE ++ +
Sbjct: 146 ARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 202
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+S+ ++L E++ G P+ + +V KA R PP PA LY +L+ +C
Sbjct: 203 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QLMLDC 257
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W + RP F QI++ L+ +
Sbjct: 258 WQKDRNNRPKFEQIVSILDKL 278
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 22/261 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 48 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 105
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 106 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 162
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+S++L ED P T R+ +PE ++ +
Sbjct: 163 ARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 219
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+S+ ++L E++ G P+ + +V KA R PP PA LY +L+ +C
Sbjct: 220 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QLMLDC 274
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W + RP F QI++ L+ +
Sbjct: 275 WQKDRNNRPKFEQIVSILDKL 295
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 22/261 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 58 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 115
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 116 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 172
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+S++L ED P T R+ +PE ++ +
Sbjct: 173 ARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 229
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+S+ ++L E++ G P+ + +V KA R PP PA LY +L+ +C
Sbjct: 230 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QLMLDC 284
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W + RP F QI++ L+ +
Sbjct: 285 WQKDRNNRPKFEQIVSILDKL 305
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 22/261 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+S++L ED P T R+ +PE ++ +
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+S+ ++L E++ G P+ + +V KA R PP PA LY +L+ +C
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QLMLDC 286
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W + RP F QI++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 22/261 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+S++L ED P T R+ +PE ++ +
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+S+ ++L E++ G P+ + +V KA R PP PA LY +L+ +C
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QLMLDC 286
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W + RP F QI++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 22/261 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+S++L ED P T R+ +PE ++ +
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+S+ ++L E++ G P+ + +V KA R PP PA LY +L+ +C
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QLMLDC 286
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W + RP F QI++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 22/261 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+S++L ED P T R+ +PE ++ +
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+S+ ++L E++ G P+ + +V KA R PP PA LY +L+ +C
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QLMLDC 286
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W + RP F QI++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 138/269 (51%), Gaps = 32/269 (11%)
Query: 163 ITKGTF---ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGA- 218
I KG F +L +RG +VAVK I +D +AF E +++ ++RH N+VQ LG
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVK-----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 219 VTQSSPMMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
V + + IVTEY+ KG L +L+ +G L ++F+LD+ M YL N +H
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 140
Query: 277 RDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDT 333
RDL N+L + KV+DFG++K + QDT ++ APE + +++ T
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFST 193
Query: 334 KVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ G P+ + + VP+ + P P +Y E+++
Sbjct: 194 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY-----EVMK 248
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSINH 419
CW+ A RP+F Q+ +LE I H
Sbjct: 249 NCWHLDAAMRPSFLQLREQLEHIKTHELH 277
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 138/269 (51%), Gaps = 32/269 (11%)
Query: 163 ITKGTF---ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGA- 218
I KG F +L +RG +VAVK I +D +AF E +++ ++RH N+VQ LG
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVK-----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 219 VTQSSPMMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
V + + IVTEY+ KG L +L+ +G L ++F+LD+ M YL N +H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 125
Query: 277 RDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDT 333
RDL N+L + KV+DFG++K + QDT ++ APE + +++ T
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFST 178
Query: 334 KVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ G P+ + + VP+ + P P +Y E+++
Sbjct: 179 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY-----EVMK 233
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSINH 419
CW+ A RP+F Q+ +LE I H
Sbjct: 234 NCWHLDAAMRPSFLQLREQLEHIKTHELH 262
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 138/263 (52%), Gaps = 32/263 (12%)
Query: 163 ITKGTF---ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGA- 218
I KG F +L +RG +VAVK I +D +AF E +++ ++RH N+VQ LG
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVK-----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 219 VTQSSPMMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
V + + IVTEY+ KG L +L+ +G L ++F+LD+ M YL N +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 312
Query: 277 RDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDT 333
RDL N+L + KV+DFG++K + + QDT ++ APE + +++ T
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFST 365
Query: 334 KVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ G P+ + + VP+ + P P +Y ++++
Sbjct: 366 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY-----DVMK 420
Query: 391 ECWNEKPAKRPTFRQIITRLESI 413
CW+ A RPTF Q+ +LE I
Sbjct: 421 NCWHLDAATRPTFLQLREQLEHI 443
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 135/261 (51%), Gaps = 22/261 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG++++L ED P T R+ +PE ++ +
Sbjct: 175 ARNILINSNLVCKVSDFGLARVL---EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+S+ ++L E++ G P+ + +V KA R PP PA LY +L+ +C
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QLMLDC 286
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W + RP F QI++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 136/269 (50%), Gaps = 32/269 (11%)
Query: 163 ITKGTF---ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAV 219
I KG F +L +RG +VAVK I +D +AF E +++ ++RH N+VQ LG +
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVK-----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 220 T-QSSPMMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
+ + IVTEY+ KG L +L+ +G L ++F+LD+ M YL N +H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 131
Query: 277 RDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDT 333
RDL N+L + KV+DFG++K + QDT ++ APE + + T
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREAAFST 184
Query: 334 KVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ G P+ + + VP+ + P P +Y E+++
Sbjct: 185 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY-----EVMK 239
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSINH 419
CW+ A RP+F Q+ +LE I H
Sbjct: 240 NCWHLDAAMRPSFLQLREQLEHIKTHELH 268
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 134/261 (51%), Gaps = 22/261 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+ ++L ED P T R+ +PE ++ +
Sbjct: 175 ARNILINSNLVCKVSDFGLGRVL---EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+S+ ++L E++ G P+ + +V KA R PP PA LY +L+ +C
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QLMLDC 286
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W + RP F QI++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 137/278 (49%), Gaps = 22/278 (7%)
Query: 149 EIDPHELDFTNSVEITK-GTFILAFWRGIQVAVKKLGEEVISD-DDRVRAFRDELALLQK 206
EID EL + I G AFW G +VAVK + D + R E L
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++HPN++ G + + +V E+ G L L K + P V +A+ IARGMNYL
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQIARGMNYL 121
Query: 267 HENKPVPIIHRDLEPSNIL---RDDSGN-----LKVADFGVSKLLTVKEDRPLTCQDTSC 318
H+ VPIIHRDL+ SNIL + ++G+ LK+ DFG++ +E T +
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-----REWHRTTKMSAAG 176
Query: 319 RY--VAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYA-ARQRPPFK 375
Y +APEV + + DV+S+ ++L E++ G PF + + + AY A +
Sbjct: 177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF--RGIDGLAVAYGVAMNKLALP 234
Query: 376 APAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
P+ +L+E+CWN P RP+F I+ +L +I
Sbjct: 235 IPSTC-PEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 134/261 (51%), Gaps = 22/261 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 31 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 88
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTE + G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 89 SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 145
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+S++L ED P T R+ +PE ++ +
Sbjct: 146 ARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 202
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+S+ ++L E++ G P+ + +V KA R PP PA LY +L+ +C
Sbjct: 203 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QLMLDC 257
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W + RP F QI++ L+ +
Sbjct: 258 WQKDRNNRPKFEQIVSILDKL 278
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 134/261 (51%), Gaps = 22/261 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTE + G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLA 174
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+S++L ED P T R+ +PE ++ +
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+S+ ++L E++ G P+ + +V KA R PP PA LY +L+ +C
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QLMLDC 286
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W + RP F QI++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 134/261 (51%), Gaps = 22/261 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L + I VA+K L +V + + R F E +++ + HPN+++ G VT+
Sbjct: 60 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 222 SSPMMIVTEYLPKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTE + G L +FL++ A V IA GM YL + + +HRDL
Sbjct: 118 SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGAVHRDLA 174
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+S++L ED P T R+ +PE ++ +
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+S+ ++L E++ G P+ + +V KA R PP PA LY +L+ +C
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY-----QLMLDC 286
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W + RP F QI++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 135/270 (50%), Gaps = 22/270 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G + R I VA+K L + D + R F E +++ + HPN++ G VT+
Sbjct: 29 EVCSGRLKVPGKREICVAIKTL--KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 86
Query: 222 SSPMMIVTEYLPKGDLRAFLKRK-GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
P+MI+TEY+ G L AFL++ G V I GM YL + + +HRDL
Sbjct: 87 CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYVHRDLA 143
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+S++L ED P T R+ APE ++ +
Sbjct: 144 ARNILVNSNLVCKVSDFGMSRVL---EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS 200
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQR--PPFKAPAKLYARGLKELIEEC 392
DV+S+ +++ E++ G P+ + +V KA R PP P L+ +L+ +C
Sbjct: 201 DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALH-----QLMLDC 255
Query: 393 WNEKPAKRPTFRQIITRLESINNSINHKRR 422
W ++ + RP F QI+ L+ + + N +R
Sbjct: 256 WQKERSDRPKFGQIVNMLDKLIRNPNSLKR 285
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 135/270 (50%), Gaps = 22/270 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G + R I VA+K L + D + R F E +++ + HPN++ G VT+
Sbjct: 23 EVCSGRLKVPGKREICVAIKTL--KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 80
Query: 222 SSPMMIVTEYLPKGDLRAFLKRK-GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
P+MI+TEY+ G L AFL++ G V I GM YL + + +HRDL
Sbjct: 81 CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYVHRDLA 137
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+S++L ED P T R+ APE ++ +
Sbjct: 138 ARNILVNSNLVCKVSDFGMSRVL---EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS 194
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQR--PPFKAPAKLYARGLKELIEEC 392
DV+S+ +++ E++ G P+ + +V KA R PP P L+ +L+ +C
Sbjct: 195 DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALH-----QLMLDC 249
Query: 393 WNEKPAKRPTFRQIITRLESINNSINHKRR 422
W ++ + RP F QI+ L+ + + N +R
Sbjct: 250 WQKERSDRPKFGQIVNMLDKLIRNPNSLKR 279
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 135/270 (50%), Gaps = 22/270 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G + R I VA+K L + D + R F E +++ + HPN++ G VT+
Sbjct: 44 EVCSGRLKVPGKREICVAIKTL--KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 101
Query: 222 SSPMMIVTEYLPKGDLRAFLKRK-GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
P+MI+TEY+ G L AFL++ G V I GM YL + + +HRDL
Sbjct: 102 CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSAVHRDLA 158
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+S++L ED P T R+ APE ++ +
Sbjct: 159 ARNILVNSNLVCKVSDFGMSRVL---EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS 215
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQR--PPFKAPAKLYARGLKELIEEC 392
DV+S+ +++ E++ G P+ + +V KA R PP P L+ +L+ +C
Sbjct: 216 DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALH-----QLMLDC 270
Query: 393 WNEKPAKRPTFRQIITRLESINNSINHKRR 422
W ++ + RP F QI+ L+ + + N +R
Sbjct: 271 WQKERSDRPKFGQIVNMLDKLIRNPNSLKR 300
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 137/264 (51%), Gaps = 18/264 (6%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L R + VA+K L +V + + R F E +++ + HPNVV G VT+
Sbjct: 58 EVCSGRLKLPGKRDVAVAIKTL--KVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTR 115
Query: 222 SSPMMIVTEYLPKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
P+MIV E++ G L AFL K G V IA GM YL + + +HRDL
Sbjct: 116 GKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLAD---MGYVHRDLA 172
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+S+++ ED P T+ R+ APE + ++ +
Sbjct: 173 ARNILVNSNLVCKVSDFGLSRVI---EDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSAS 229
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWN 394
DV+S+ +++ E++ G P+ + +V KA R P AP A GL +L+ +CW
Sbjct: 230 DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP--APMDCPA-GLHQLMLDCWQ 286
Query: 395 EKPAKRPTFRQIITRLESINNSIN 418
++ A+RP F QI+ L+ + + N
Sbjct: 287 KERAERPKFEQIVGILDKMIRNPN 310
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 132/261 (50%), Gaps = 22/261 (8%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L R + VA+K L +V + + R F E +++ + HPN++ G VT+
Sbjct: 37 EVCSGRLKLPGKRELPVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTK 94
Query: 222 SSPMMIVTEYLPKGDLRAFLKRK-GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S P+MIVTEY+ G L FLK+ G V I+ GM YL + + +HRDL
Sbjct: 95 SKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSD---MGYVHRDLA 151
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKV 335
NIL + + KV+DFG+S++L ED P T R+ APE ++ +
Sbjct: 152 ARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSAS 208
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQR--PPFKAPAKLYARGLKELIEEC 392
DV+S+ +++ E++ G P+ + +V KA R P PA LY +L+ +C
Sbjct: 209 DVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALY-----QLMLDC 263
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W ++ RP F +I+ L+ +
Sbjct: 264 WQKERNSRPKFDEIVNMLDKL 284
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 122/248 (49%), Gaps = 20/248 (8%)
Query: 166 GTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM 225
G A WR VA+K+ I + +AF EL L ++ HPN+V+ GA +P+
Sbjct: 22 GVVCKAKWRAKDVAIKQ-----IESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPV 74
Query: 226 MIVTEYLPKGDLRAFLKRKGALKPSTA---VRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+V EY G L L L TA + + L ++G+ YLH +P +IHRDL+P
Sbjct: 75 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPP 134
Query: 283 NILRDDSGN-LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFA 341
N+L G LK+ DFG + + +T S ++APEVF+ Y K DVFS+
Sbjct: 135 NLLLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWG 190
Query: 342 LILQEMIEGCPPFTMKHDNEVPKAYAARQ--RPPFKAPAKLYARGLKELIEECWNEKPAK 399
+IL E+I PF +A RPP K + ++ L+ CW++ P++
Sbjct: 191 IILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL---IKNLPKPIESLMTRCWSKDPSQ 247
Query: 400 RPTFRQII 407
RP+ +I+
Sbjct: 248 RPSMEEIV 255
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 122/248 (49%), Gaps = 20/248 (8%)
Query: 166 GTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM 225
G A WR VA+K+ I + +AF EL L ++ HPN+V+ GA +P+
Sbjct: 23 GVVCKAKWRAKDVAIKQ-----IESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPV 75
Query: 226 MIVTEYLPKGDLRAFLKRKGALKPSTA---VRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+V EY G L L L TA + + L ++G+ YLH +P +IHRDL+P
Sbjct: 76 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPP 135
Query: 283 NILRDDSGN-LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFA 341
N+L G LK+ DFG + + +T S ++APEVF+ Y K DVFS+
Sbjct: 136 NLLLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWG 191
Query: 342 LILQEMIEGCPPFTMKHDNEVPKAYAARQ--RPPFKAPAKLYARGLKELIEECWNEKPAK 399
+IL E+I PF +A RPP K + ++ L+ CW++ P++
Sbjct: 192 IILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL---IKNLPKPIESLMTRCWSKDPSQ 248
Query: 400 RPTFRQII 407
RP+ +I+
Sbjct: 249 RPSMEEIV 256
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 126/258 (48%), Gaps = 25/258 (9%)
Query: 166 GTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS 223
G + W+ + VAVK L E+ + V F E A++++I+HPN+VQ LG T
Sbjct: 46 GEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTLEP 101
Query: 224 PMMIVTEYLPKGDLRAFLKRKGALKPSTAV---RFALDIARGMNYLHENKPVPIIHRDLE 280
P IVTEY+P G+L +L R+ + TAV A I+ M YL + IHRDL
Sbjct: 102 PFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQISSAMEYLEKKN---FIHRDLA 157
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 340
N L ++ +KVADFG+S+L+T ++ APE + K DV++F
Sbjct: 158 ARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAF 217
Query: 341 ALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYARGLKELIEECWNE 395
++L E+ G P+ ++V K Y R P P K+Y EL+ CW
Sbjct: 218 GVLLWEIATYGMSPYPGIDLSQVYDLLEKGY--RMEQPEGCPPKVY-----ELMRACWKW 270
Query: 396 KPAKRPTFRQIITRLESI 413
PA RP+F + E++
Sbjct: 271 SPADRPSFAETHQAFETM 288
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 137/271 (50%), Gaps = 22/271 (8%)
Query: 148 YEIDPHELDFTNSVEITKGTF-ILAF--WRG-IQVAVKKLGEEVISDDDRVRAFRDELAL 203
+EIDP +L F E+ G F ++ + WRG VA+K + E +S+D+ F +E +
Sbjct: 19 WEIDPKDLTFLK--ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKV 72
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARG 262
+ + H +VQ G T+ P+ I+TEY+ G L +L+ + + + D+
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 132
Query: 263 MNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVA 322
M YL + +HRDL N L +D G +KV+DFG+S+ + E+ R+
Sbjct: 133 MEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSP 189
Query: 323 PEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAK 379
PEV ++ +K D+++F +++ E+ G P+ ++E + A R P A K
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 249
Query: 380 LYARGLKELIEECWNEKPAKRPTFRQIITRL 410
+Y ++ CW+EK +RPTF+ +++ +
Sbjct: 250 VYT-----IMYSCWHEKADERPTFKILLSNI 275
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 135/269 (50%), Gaps = 36/269 (13%)
Query: 171 AFWRGIQVAVKKLGEEVIS------DDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
F + I+V ++ GE ++ D++ R F E+ +++ + HPNV++F+G + +
Sbjct: 22 CFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKR 81
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKP-STAVRFALDIARGMNYLHENKPVPIIHRDLEPSN 283
+ +TEY+ G LR +K + P S V FA DIA GM YLH + IIHRDL N
Sbjct: 82 LNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHN 138
Query: 284 ILRDDSGNLKVADFGVSKLLTVKEDRP-----LTCQDTSCRY--------VAPEVFKNEE 330
L ++ N+ VADFG+++L+ ++ +P L D RY +APE+
Sbjct: 139 CLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRS 198
Query: 331 YDTKVDVFSFALILQEMIEGCP------PFTMKHDNEVPKAYAARQRPPFKAPAKLYARG 384
YD KVDVFSF ++L E+I P TM V + + R PP P +
Sbjct: 199 YDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV-RGFLDRYCPP-NCPPSFFP-- 254
Query: 385 LKELIEECWNEKPAKRPTFRQIITRLESI 413
+ C + P KRP+F ++ LE++
Sbjct: 255 ---ITVRCCDLDPEKRPSFVKLEHWLETL 280
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 22/271 (8%)
Query: 148 YEIDPHELDFTNSVEITKGTF-ILAF--WRG-IQVAVKKLGEEVISDDDRVRAFRDELAL 203
+EIDP +L F E+ G F ++ + WRG VA+K + E +S+D+ F +E +
Sbjct: 4 WEIDPKDLTFLK--ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKV 57
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARG 262
+ + H +VQ G T+ P+ I+TEY+ G L +L+ + + + D+
Sbjct: 58 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 117
Query: 263 MNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVA 322
M YL + +HRDL N L +D G +KV+DFG+S+ + E R+
Sbjct: 118 MEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 174
Query: 323 PEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAK 379
PEV ++ +K D+++F +++ E+ G P+ ++E + A R P A K
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 234
Query: 380 LYARGLKELIEECWNEKPAKRPTFRQIITRL 410
+Y ++ CW+EK +RPTF+ +++ +
Sbjct: 235 VYT-----IMYSCWHEKADERPTFKILLSNI 260
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 22/271 (8%)
Query: 148 YEIDPHELDFTNSVEITKGTF-ILAF--WRG-IQVAVKKLGEEVISDDDRVRAFRDELAL 203
+EIDP +L F E+ G F ++ + WRG VA+K + E +S+D+ F +E +
Sbjct: 3 WEIDPKDLTFLK--ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKV 56
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARG 262
+ + H +VQ G T+ P+ I+TEY+ G L +L+ + + + D+
Sbjct: 57 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 116
Query: 263 MNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVA 322
M YL + +HRDL N L +D G +KV+DFG+S+ + E R+
Sbjct: 117 MEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 173
Query: 323 PEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAK 379
PEV ++ +K D+++F +++ E+ G P+ ++E + A R P A K
Sbjct: 174 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 233
Query: 380 LYARGLKELIEECWNEKPAKRPTFRQIITRL 410
+Y ++ CW+EK +RPTF+ +++ +
Sbjct: 234 VYT-----IMYSCWHEKADERPTFKILLSNI 259
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 22/271 (8%)
Query: 148 YEIDPHELDFTNSVEITKGTF-ILAF--WRG-IQVAVKKLGEEVISDDDRVRAFRDELAL 203
+EIDP +L F E+ G F ++ + WRG VA+K + E +S+D+ F +E +
Sbjct: 10 WEIDPKDLTFLK--ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKV 63
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARG 262
+ + H +VQ G T+ P+ I+TEY+ G L +L+ + + + D+
Sbjct: 64 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 123
Query: 263 MNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVA 322
M YL + +HRDL N L +D G +KV+DFG+S+ + E R+
Sbjct: 124 MEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 180
Query: 323 PEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAK 379
PEV ++ +K D+++F +++ E+ G P+ ++E + A R P A K
Sbjct: 181 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 240
Query: 380 LYARGLKELIEECWNEKPAKRPTFRQIITRL 410
+Y ++ CW+EK +RPTF+ +++ +
Sbjct: 241 VYT-----IMYSCWHEKADERPTFKILLSNI 266
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 22/271 (8%)
Query: 148 YEIDPHELDFTNSVEITKGTF-ILAF--WRG-IQVAVKKLGEEVISDDDRVRAFRDELAL 203
+EIDP +L F E+ G F ++ + WRG VA+K + E +S+D+ F +E +
Sbjct: 19 WEIDPKDLTFLK--ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKV 72
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARG 262
+ + H +VQ G T+ P+ I+TEY+ G L +L+ + + + D+
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 132
Query: 263 MNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVA 322
M YL + +HRDL N L +D G +KV+DFG+S+ + E R+
Sbjct: 133 MEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 189
Query: 323 PEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAK 379
PEV ++ +K D+++F +++ E+ G P+ ++E + A R P A K
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 249
Query: 380 LYARGLKELIEECWNEKPAKRPTFRQIITRL 410
+Y ++ CW+EK +RPTF+ +++ +
Sbjct: 250 VYT-----IMYSCWHEKADERPTFKILLSNI 275
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 22/271 (8%)
Query: 148 YEIDPHELDFTNSVEITKGTF-ILAF--WRG-IQVAVKKLGEEVISDDDRVRAFRDELAL 203
+EIDP +L F E+ G F ++ + WRG VA+K + E +S+D+ F +E +
Sbjct: 4 WEIDPKDLTFLK--ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKV 57
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARG 262
+ + H +VQ G T+ P+ I+TEY+ G L +L+ + + + D+
Sbjct: 58 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 117
Query: 263 MNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVA 322
M YL + +HRDL N L +D G +KV+DFG+S+ + E R+
Sbjct: 118 MEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSP 174
Query: 323 PEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAK 379
PEV ++ +K D+++F +++ E+ G P+ ++E + A R P A K
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 234
Query: 380 LYARGLKELIEECWNEKPAKRPTFRQIITRL 410
+Y ++ CW+EK +RPTF+ +++ +
Sbjct: 235 VYT-----IMYSCWHEKADERPTFKILLSNI 260
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 145/289 (50%), Gaps = 23/289 (7%)
Query: 150 IDPHELDFTNSVEITKGTFILAFWRGIQVAVKKLGEEVISD----DDRVRAFRDELALLQ 205
+DP EL FT +I KG+F F +GI +K+ I D +D + + E+ +L
Sbjct: 3 LDPEEL-FTKLEKIGKGSFGEVF-KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNY 265
+ P V ++ G+ + + + I+ EYL G L+ G L + +I +G++Y
Sbjct: 61 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDY 119
Query: 266 LHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEV 325
LH K IHRD++ +N+L + G +K+ADFGV+ LT + + T T ++APEV
Sbjct: 120 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-WMAPEV 175
Query: 326 FKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGL 385
K YD+K D++S + E+ G PP + H +V P + Y++ L
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGN---YSKPL 232
Query: 386 KELIEECWNEKPAKRPTFRQIITRLESINNS---------INHKRRWKV 425
KE +E C N++P+ RPT ++++ + N+ I+ +RWK
Sbjct: 233 KEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKA 281
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 45 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 102
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 103 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 157
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 158 LAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKS 217
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 218 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 272
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 273 WHPKAEMRPSFSELVSRISAI 293
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 128/260 (49%), Gaps = 36/260 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
+ A+K++ E DD R F EL +L K+ HPN++ LGA + + EY P
Sbjct: 43 MDAAIKRMKEYASKDDHR--DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 100
Query: 235 GDLRAFLKRKGALK--PSTAV--------------RFALDIARGMNYLHENKPVPIIHRD 278
G+L FL++ L+ P+ A+ FA D+ARGM+YL + + IHRD
Sbjct: 101 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRD 157
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVF 338
L NIL ++ K+ADFG+S+ V + T R++A E Y T DV+
Sbjct: 158 LAARNILVGENYVAKIADFGLSRGQEVYVKK--TMGRLPVRWMAIESLNYSVYTTNSDVW 215
Query: 339 SFALILQEMIE-GCPPFTMKHDNE----VPKAYAARQRPPFKAPAKLYARGLKELIEECW 393
S+ ++L E++ G P+ E +P+ Y R P ++Y +L+ +CW
Sbjct: 216 SYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY--RLEKPLNCDDEVY-----DLMRQCW 268
Query: 394 NEKPAKRPTFRQIITRLESI 413
EKP +RP+F QI+ L +
Sbjct: 269 REKPYERPSFAQILVSLNRM 288
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 128/260 (49%), Gaps = 36/260 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
+ A+K++ E DD R F EL +L K+ HPN++ LGA + + EY P
Sbjct: 53 MDAAIKRMKEYASKDDHR--DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 110
Query: 235 GDLRAFLKRKG--------ALKPSTA--------VRFALDIARGMNYLHENKPVPIIHRD 278
G+L FL++ A+ STA + FA D+ARGM+YL + + IHRD
Sbjct: 111 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRD 167
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVF 338
L NIL ++ K+ADFG+S+ V + T R++A E Y T DV+
Sbjct: 168 LAARNILVGENYVAKIADFGLSRGQEVYVKK--TMGRLPVRWMAIESLNYSVYTTNSDVW 225
Query: 339 SFALILQEMIE-GCPPFTMKHDNE----VPKAYAARQRPPFKAPAKLYARGLKELIEECW 393
S+ ++L E++ G P+ E +P+ Y R P ++Y +L+ +CW
Sbjct: 226 SYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY--RLEKPLNCDDEVY-----DLMRQCW 278
Query: 394 NEKPAKRPTFRQIITRLESI 413
EKP +RP+F QI+ L +
Sbjct: 279 REKPYERPSFAQILVSLNRM 298
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 17 HKLGGGQFGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 67
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + S V A I+ M YL +
Sbjct: 68 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 128 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 184
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY--RMERPEGCPEKVY-- 240
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 241 ---ELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 140/276 (50%), Gaps = 26/276 (9%)
Query: 146 PEYEIDPHELDFTNSVEITK-GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELAL 203
PE+E+ L + + G + ++ G +VAVK L + +S D AF E L
Sbjct: 2 PEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANL 57
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIAR 261
+++++H +V+ VTQ P+ I+TEY+ G L FLK +K + + A IA
Sbjct: 58 MKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 262 GMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---C 318
GM ++ E IHR+L +NIL D+ + K+ADFG+++L+ ED T ++ +
Sbjct: 117 GMAFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPI 170
Query: 319 RYVAPEVFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFK 375
++ APE + K DV+SF ++L E++ G P+ + EV + R P
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 230
Query: 376 APAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 411
P +LY +L+ CW E+P RPTF + + LE
Sbjct: 231 CPEELY-----QLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 104 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 158
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 159 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 218
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 219 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 273
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 274 WHPKAEMRPSFSELVSRISAI 294
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 45 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 102
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 103 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 157
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 158 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 217
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 218 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 272
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 273 WHPKAEMRPSFSELVSRISAI 293
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 43 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 100
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 101 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 155
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 156 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 215
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 216 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 270
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 271 WHPKAEMRPSFSELVSRISAI 291
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 44 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 102 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 156
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 157 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 216
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 217 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 271
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 272 WHPKAEMRPSFSELVSRISAI 292
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 98
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 99 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 153
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 154 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 213
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 214 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 268
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 269 WHPKAEMRPSFSELVSRISAI 289
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 25/255 (9%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 22 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 76
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 133
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFS 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE + K DV+S
Sbjct: 134 NILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 190
Query: 340 FALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEK 396
F ++L E++ G P+ + EV + R P P +LY +L+ CW E+
Sbjct: 191 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKER 245
Query: 397 PAKRPTFRQIITRLE 411
P RPTF + + LE
Sbjct: 246 PEDRPTFDYLRSVLE 260
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 64 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 121
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 122 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 176
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 177 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 236
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 237 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 291
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 292 WHPKAEMRPSFSELVSRISAI 312
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 65 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 122
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 123 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 177
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 178 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 237
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 238 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 292
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 293 WHPKAEMRPSFSELVSRISAI 313
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 38 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 95
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 96 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 150
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 151 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 210
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 211 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 265
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 266 WHPKAEMRPSFSELVSRISAI 286
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 17 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 67
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + S V A I+ M YL +
Sbjct: 68 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 128 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAY 184
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY--RMERPEGCPEKVY-- 240
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 241 ---ELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM YL K +HRD
Sbjct: 104 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRD 158
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 159 LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS 218
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 219 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 273
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 274 WHPKAEMRPSFSELVSRISAI 294
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 25/255 (9%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 81
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 138
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFS 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE + K DV+S
Sbjct: 139 NILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 340 FALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEK 396
F ++L E++ G P+ + EV + R P P +LY +L+ CW E+
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKER 250
Query: 397 PAKRPTFRQIITRLE 411
P RPTF + + LE
Sbjct: 251 PEDRPTFDYLRSVLE 265
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 25/255 (9%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 32 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 86
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 87 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 143
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFS 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE + K DV+S
Sbjct: 144 NILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 200
Query: 340 FALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEK 396
F ++L E++ G P+ + EV + R P P +LY +L+ CW E+
Sbjct: 201 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKER 255
Query: 397 PAKRPTFRQIITRLE 411
P RPTF + + LE
Sbjct: 256 PEDRPTFDYLRSVLE 270
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 128/260 (49%), Gaps = 18/260 (6%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L R I VA+K L + + R F E +++ + HPNV+ G VT+
Sbjct: 48 EVCSGHLKLPGKREIFVAIKTLKSGYT--EKQRRDFLSEASIMGQFDHPNVIHLEGVVTK 105
Query: 222 SSPMMIVTEYLPKGDLRAFLKRK-GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S+P+MI+TE++ G L +FL++ G V IA GM YL + + +HRDL
Sbjct: 106 STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLA 162
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS----CRYVAPEVFKNEEYDTKVD 336
NIL + + KV+DFG+S+ L P R+ APE + ++ + D
Sbjct: 163 ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASD 222
Query: 337 VFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQR--PPFKAPAKLYARGLKELIEECW 393
V+S+ +++ E++ G P+ + +V A R PP P+ L+ +L+ +CW
Sbjct: 223 VWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALH-----QLMLDCW 277
Query: 394 NEKPAKRPTFRQIITRLESI 413
+ RP F QI+ L+ +
Sbjct: 278 QKDRNHRPKFGQIVNTLDKM 297
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 25/255 (9%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 81
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST--AVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 138
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFS 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE + K DV+S
Sbjct: 139 NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 340 FALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEK 396
F ++L E++ G P+ + EV + R P P +LY +L+ CW E+
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKER 250
Query: 397 PAKRPTFRQIITRLE 411
P RPTF + + LE
Sbjct: 251 PEDRPTFDYLRSVLE 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 25/255 (9%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 28 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 82
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 139
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFS 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE + K DV+S
Sbjct: 140 NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 196
Query: 340 FALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEK 396
F ++L E++ G P+ + EV + R P P +LY +L+ CW E+
Sbjct: 197 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKER 251
Query: 397 PAKRPTFRQIITRLE 411
P RPTF + + LE
Sbjct: 252 PEDRPTFDYLRSVLE 266
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 134/269 (49%), Gaps = 22/269 (8%)
Query: 150 IDPHELDFTNSVEITKGTF-ILAF--WRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQ 205
IDP +L F E+ G F ++ + WRG VA+K + E +S+D+ F +E ++
Sbjct: 1 IDPKDLTFLK--ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMM 54
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARGMN 264
+ H +VQ G T+ P+ I+TEY+ G L +L+ + + + D+ M
Sbjct: 55 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 114
Query: 265 YLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPE 324
YL + +HRDL N L +D G +KV+DFG+S+ + E R+ PE
Sbjct: 115 YLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE 171
Query: 325 VFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLY 381
V ++ +K D+++F +++ E+ G P+ ++E + A R P A K+Y
Sbjct: 172 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 231
Query: 382 ARGLKELIEECWNEKPAKRPTFRQIITRL 410
++ CW+EK +RPTF+ +++ +
Sbjct: 232 T-----IMYSCWHEKADERPTFKILLSNI 255
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 24 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 74
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + S V A I+ M YL +
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 134
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 135 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 247
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 248 ---ELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 19 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 69
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + S V A I+ M YL +
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 130 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 242
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 243 ---ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 25/255 (9%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 33 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 87
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 144
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFS 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE + K DV+S
Sbjct: 145 NILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 201
Query: 340 FALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEK 396
F ++L E++ G P+ + EV + R P P +LY +L+ CW E+
Sbjct: 202 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKER 256
Query: 397 PAKRPTFRQIITRLE 411
P RPTF + + LE
Sbjct: 257 PEDRPTFDYLRSVLE 271
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 25/255 (9%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 29 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 83
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 84 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 140
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFS 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE + K DV+S
Sbjct: 141 NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 197
Query: 340 FALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEK 396
F ++L E++ G P+ + EV + R P P +LY +L+ CW E+
Sbjct: 198 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKER 252
Query: 397 PAKRPTFRQIITRLE 411
P RPTF + + LE
Sbjct: 253 PEDRPTFDYLRSVLE 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 19 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 69
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + S V A I+ M YL +
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 130 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 242
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 243 ---ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 25/255 (9%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 37 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 91
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 92 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 148
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFS 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE + K DV+S
Sbjct: 149 NILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 205
Query: 340 FALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEK 396
F ++L E++ G P+ + EV + R P P +LY +L+ CW E+
Sbjct: 206 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKER 260
Query: 397 PAKRPTFRQIITRLE 411
P RPTF + + LE
Sbjct: 261 PEDRPTFDYLRSVLE 275
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 142/284 (50%), Gaps = 29/284 (10%)
Query: 152 PHELDFTNSVE-ITKGTFILAF--------WRGIQVAVKKLGEEVISDDDRVRAFRDELA 202
PHE T+S I KG F + + IQ A+K L I++ +V AF E
Sbjct: 17 PHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR--ITEMQQVEAFLREGL 74
Query: 203 LLQKIRHPNVVQFLGAVTQSSPM-MIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDI 259
L++ + HPNV+ +G + + ++ Y+ GDL F+ R P+ + F L +
Sbjct: 75 LMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI-RSPQRNPTVKDLISFGLQV 133
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-- 317
ARGM YL E K +HRDL N + D+S +KVADFG+++ + +E + +
Sbjct: 134 ARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL 190
Query: 318 -CRYVAPEVFKNEEYDTKVDVFSFALILQEMI-EGCPPFTMKHDNEVPKAYAARQR--PP 373
++ A E + + TK DV+SF ++L E++ G PP+ ++ A +R P
Sbjct: 191 PVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQP 250
Query: 374 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 417
P LY +++++CW PA RPTFR ++ +E I +++
Sbjct: 251 EYCPDSLY-----QVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 144/289 (49%), Gaps = 23/289 (7%)
Query: 150 IDPHELDFTNSVEITKGTFILAFWRGIQVAVKKLGEEVISD----DDRVRAFRDELALLQ 205
+DP EL FT +I KG+F F +GI +K+ I D +D + + E+ +L
Sbjct: 3 LDPEEL-FTKLEKIGKGSFGEVF-KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNY 265
+ P V ++ G+ + + + I+ EYL G L+ G L + +I +G++Y
Sbjct: 61 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDY 119
Query: 266 LHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEV 325
LH K IHRD++ +N+L + G +K+ADFGV+ LT + + T ++APEV
Sbjct: 120 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-WMAPEV 175
Query: 326 FKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGL 385
K YD+K D++S + E+ G PP + H +V P + Y++ L
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGN---YSKPL 232
Query: 386 KELIEECWNEKPAKRPTFRQIITRLESINNS---------INHKRRWKV 425
KE +E C N++P+ RPT ++++ + N+ I+ +RWK
Sbjct: 233 KEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKA 281
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 115/239 (48%), Gaps = 28/239 (11%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFL--------------- 241
FR E L +++HPNVV LG VT+ P+ ++ Y GDL FL
Sbjct: 59 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 118
Query: 242 -KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVS 300
K AL+P V IA GM YL + ++H+DL N+L D N+K++D G+
Sbjct: 119 RTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLF 175
Query: 301 KLLTVKEDRPLTCQD-TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKH 358
+ + + L R++APE ++ D++S+ ++L E+ G P+
Sbjct: 176 REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 235
Query: 359 DNEVPKAYAARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINN 415
+ +V + RQ P PA +YA L+ ECWNE P++RP F+ I +RL + N
Sbjct: 236 NQDVVEMIRNRQVLPCPDDCPAWVYA-----LMIECWNEFPSRRPRFKDIHSRLRAWGN 289
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 25/255 (9%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 81
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 138
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFS 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE + K DV+S
Sbjct: 139 NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 340 FALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEK 396
F ++L E++ G P+ + EV + R P P +LY +L+ CW E+
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKER 250
Query: 397 PAKRPTFRQIITRLE 411
P RPTF + + LE
Sbjct: 251 PEDRPTFDYLRSVLE 265
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 127/247 (51%), Gaps = 22/247 (8%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+ VA+K L + ++ RV F E ++ + H N+++ G +++ PMMI+TEY+ G
Sbjct: 74 VPVAIKTL-KAGYTEKQRVD-FLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENG 131
Query: 236 DLRAFLKRK-GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L FL+ K G V IA GM YL + +HRDL NIL + + KV
Sbjct: 132 ALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKV 188
Query: 295 ADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYDTKVDVFSFALILQE-MI 348
+DFG+S++L ED P TS R+ APE ++ + DV+SF +++ E M
Sbjct: 189 SDFGLSRVL---EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
Query: 349 EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
G P+ ++EV KA R P P+ +Y +L+ +CW ++ A+RP F I
Sbjct: 246 YGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIY-----QLMMQCWQQERARRPKFADI 300
Query: 407 ITRLESI 413
++ L+ +
Sbjct: 301 VSILDKL 307
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 25/255 (9%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 35 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 89
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 90 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 146
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFS 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE + K DV+S
Sbjct: 147 NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 203
Query: 340 FALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEK 396
F ++L E++ G P+ + EV + R P P +LY +L+ CW E+
Sbjct: 204 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKER 258
Query: 397 PAKRPTFRQIITRLE 411
P RPTF + + LE
Sbjct: 259 PEDRPTFDYLRSVLE 273
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 115/239 (48%), Gaps = 28/239 (11%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFL--------------- 241
FR E L +++HPNVV LG VT+ P+ ++ Y GDL FL
Sbjct: 76 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 135
Query: 242 -KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVS 300
K AL+P V IA GM YL + ++H+DL N+L D N+K++D G+
Sbjct: 136 RTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLF 192
Query: 301 KLLTVKEDRPLTCQD-TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKH 358
+ + + L R++APE ++ D++S+ ++L E+ G P+
Sbjct: 193 REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 252
Query: 359 DNEVPKAYAARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINN 415
+ +V + RQ P PA +YA L+ ECWNE P++RP F+ I +RL + N
Sbjct: 253 NQDVVEMIRNRQVLPCPDDCPAWVYA-----LMIECWNEFPSRRPRFKDIHSRLRAWGN 306
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 24 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 74
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 135 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 191
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 247
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 248 ---ELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 25/255 (9%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 36 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 90
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 91 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 147
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFS 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE + K DV+S
Sbjct: 148 NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 204
Query: 340 FALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEK 396
F ++L E++ G P+ + EV + R P P +LY +L+ CW E+
Sbjct: 205 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKER 259
Query: 397 PAKRPTFRQIITRLE 411
P RPTF + + LE
Sbjct: 260 PEDRPTFDYLRSVLE 274
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 128/260 (49%), Gaps = 36/260 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
+ A+K++ E DD R F EL +L K+ HPN++ LGA + + EY P
Sbjct: 50 MDAAIKRMKEYASKDDHR--DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 107
Query: 235 GDLRAFLKRKG--------ALKPSTA--------VRFALDIARGMNYLHENKPVPIIHRD 278
G+L FL++ A+ STA + FA D+ARGM+YL + + IHR+
Sbjct: 108 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRN 164
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVF 338
L NIL ++ K+ADFG+S+ V + T R++A E Y T DV+
Sbjct: 165 LAARNILVGENYVAKIADFGLSRGQEVYVKK--TMGRLPVRWMAIESLNYSVYTTNSDVW 222
Query: 339 SFALILQEMIE-GCPPFTMKHDNE----VPKAYAARQRPPFKAPAKLYARGLKELIEECW 393
S+ ++L E++ G P+ E +P+ Y R P ++Y +L+ +CW
Sbjct: 223 SYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY--RLEKPLNCDDEVY-----DLMRQCW 275
Query: 394 NEKPAKRPTFRQIITRLESI 413
EKP +RP+F QI+ L +
Sbjct: 276 REKPYERPSFAQILVSLNRM 295
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 25/255 (9%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 33 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 87
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 144
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFS 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE + K DV+S
Sbjct: 145 NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 201
Query: 340 FALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEK 396
F ++L E++ G P+ + EV + R P P +LY +L+ CW E+
Sbjct: 202 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKER 256
Query: 397 PAKRPTFRQIITRLE 411
P RPTF + + LE
Sbjct: 257 PEDRPTFDYLRSVLE 271
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 17 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 67
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+ E++ G+L +L+ + S V A I+ M YL +
Sbjct: 68 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 128 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 184
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY--RMERPEGCPEKVY-- 240
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 241 ---ELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 25/255 (9%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + ++ G +VAVK L + +S D AF E L+++++H +V+ VTQ P
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVRLYAVVTQE-P 81
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ I+TEY+ G L FLK +K + + A IA GM ++ E IHRDL +
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 138
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFS 339
NIL D+ + K+ADFG+++L+ ED T ++ + ++ APE + K DV+S
Sbjct: 139 NILVSDTLSCKIADFGLARLI---EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 340 FALILQEMI-EGCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEK 396
F ++L E++ G P+ + EV + R P P +LY +L+ CW E+
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY-----QLMRLCWKER 250
Query: 397 PAKRPTFRQIITRLE 411
P RPTF + + LE
Sbjct: 251 PEDRPTFDYLRSVLE 265
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 136/262 (51%), Gaps = 14/262 (5%)
Query: 150 IDPHELDFTNSVEITKGTFILAFWRGIQVAVKKLGEEVISD----DDRVRAFRDELALLQ 205
+DP EL FT +I KG+F F +GI +K+ I D +D + + E+ +L
Sbjct: 23 MDPEEL-FTKLEKIGKGSFGEVF-KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 80
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNY 265
+ P V ++ G+ + + + I+ EYL G L+ G L + +I +G++Y
Sbjct: 81 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDY 139
Query: 266 LHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEV 325
LH K IHRD++ +N+L + G +K+ADFGV+ LT + + T T ++APEV
Sbjct: 140 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-WMAPEV 195
Query: 326 FKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGL 385
K YD+K D++S + E+ G PP + H +V P + Y++ L
Sbjct: 196 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGN---YSKPL 252
Query: 386 KELIEECWNEKPAKRPTFRQII 407
KE +E C N++P+ RPT ++++
Sbjct: 253 KEFVEACLNKEPSFRPTAKELL 274
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 32 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 82
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 83 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 142
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 143 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 199
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 200 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 255
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 256 ---ELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 21 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 71
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 132 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 188
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 244
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 245 ---ELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 51 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 108
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM +L K +HRD
Sbjct: 109 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 163
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 164 LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS 223
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 224 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 278
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 279 WHPKAEMRPSFSELVSRISAI 299
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 21 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 71
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 132 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 188
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 244
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 245 ---ELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 24 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 74
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 135 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 247
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 248 ---ELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 23 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 73
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 74 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 133
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 134 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 190
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 246
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 247 ---ELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 47 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 104
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM +L K +HRD
Sbjct: 105 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 159
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 160 LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS 219
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 220 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 274
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 275 WHPKAEMRPSFSELVSRISAI 295
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 19 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 69
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 129
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 130 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 242
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 243 ---ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E D V F E A++++I+HP
Sbjct: 19 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHP 69
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 129
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 130 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 242
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 243 ---ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 44 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM +L K +HRD
Sbjct: 102 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 156
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 157 LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS 216
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 217 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 271
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 272 WHPKAEMRPSFSELVSRISAI 292
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 47 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 104
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM +L K +HRD
Sbjct: 105 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 159
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 160 LAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS 219
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 220 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 274
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 275 WHPKAEMRPSFSELVSRISAI 295
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 24 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 74
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 135 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 247
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 248 ---ELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM +L K +HRD
Sbjct: 104 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 158
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 159 LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS 218
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 219 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 273
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 274 WHPKAEMRPSFSELVSRISAI 294
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 143/288 (49%), Gaps = 23/288 (7%)
Query: 151 DPHELDFTNSVEITKGTFILAFWRGIQVAVKKLGEEVISD----DDRVRAFRDELALLQK 206
DP EL FT +I KG+F F +GI +K+ I D +D + + E+ +L +
Sbjct: 19 DPEEL-FTKLEKIGKGSFGEVF-KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 76
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
P V ++ G+ + + + I+ EYL G L+ G L + +I +G++YL
Sbjct: 77 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYL 135
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF 326
H K IHRD++ +N+L + G +K+ADFGV+ LT + + T ++APEV
Sbjct: 136 HSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-WMAPEVI 191
Query: 327 KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLK 386
K YD+K D++S + E+ G PP + H +V P + Y++ LK
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGN---YSKPLK 248
Query: 387 ELIEECWNEKPAKRPTFRQIITRLESINNS---------INHKRRWKV 425
E +E C N++P+ RPT ++++ + N+ I+ +RWK
Sbjct: 249 EFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKA 296
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 21 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 71
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 132 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY 188
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 244
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 245 ---ELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 20 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 70
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 71 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 130
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 131 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY 187
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 243
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 244 ---ELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM +L K +HRD
Sbjct: 104 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 158
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 159 LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS 218
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 219 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 273
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 274 WHPKAEMRPSFSELVSRISAI 294
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 226 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 276
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + S V A I+ M YL +
Sbjct: 277 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 336
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHR+L N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 337 KN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 393
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 394 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 449
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 450 ---ELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQS 222
+ GT + + I AVK L I+D V F E +++ HPNV+ LG +S
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 162
Query: 223 --SPMMIVTEYLPKGDLRAFLKRKGALKPSTA--VRFALDIARGMNYLHENKPVPIIHRD 278
SP+ +V Y+ GDLR F+ R P+ + F L +A+GM +L K +HRD
Sbjct: 163 EGSPL-VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRD 217
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL---TCQDTSCRYVAPEVFKNEEYDTKV 335
L N + D+ +KVADFG+++ + KE + T +++A E + +++ TK
Sbjct: 218 LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS 277
Query: 336 DVFSFALILQE-MIEGCPPF--TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E M G PP+ D V R P P LY E++ +C
Sbjct: 278 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY-----EVMLKC 332
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ K RP+F ++++R+ +I
Sbjct: 333 WHPKAEMRPSFSELVSRISAI 353
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 19 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 69
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+ E++ G+L +L+ + S V A I+ M YL +
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 130 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 242
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 243 ---ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 19 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 69
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV--RFALDIARGMNYLHE 268
N+VQ LG T+ P I+ E++ G+L +L+ + S V A I+ M YL +
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 130 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 242
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 243 ---ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 18/260 (6%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ G L R I VA+K L + + R F E +++ + HPNV+ G VT+
Sbjct: 22 EVCSGHLKLPGKREIFVAIKTLKSGYT--EKQRRDFLSEASIMGQFDHPNVIHLEGVVTK 79
Query: 222 SSPMMIVTEYLPKGDLRAFLKRK-GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
S+P+MI+TE++ G L +FL++ G V IA GM YL + + +HR L
Sbjct: 80 STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRALA 136
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS----CRYVAPEVFKNEEYDTKVD 336
NIL + + KV+DFG+S+ L P R+ APE + ++ + D
Sbjct: 137 ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASD 196
Query: 337 VFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQR--PPFKAPAKLYARGLKELIEECW 393
V+S+ +++ E++ G P+ + +V A R PP P+ L+ +L+ +CW
Sbjct: 197 VWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALH-----QLMLDCW 251
Query: 394 NEKPAKRPTFRQIITRLESI 413
+ RP F QI+ L+ +
Sbjct: 252 QKDRNHRPKFGQIVNTLDKM 271
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 130/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 20 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 70
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+ E++ G+L +L+ + + + A I+ M YL +
Sbjct: 71 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 130
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 131 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 187
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 243
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 244 ---ELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 23/243 (9%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK L +S V+AF +E L++ ++H +V+ VT+ P+ I+TEY+ KG
Sbjct: 39 KVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGS 94
Query: 237 LRAFLK--RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L FLK G + + F+ IA GM Y+ IHRDL +N+L +S K+
Sbjct: 95 LLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKI 151
Query: 295 ADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-G 350
ADFG+++++ ED T ++ + ++ APE + K DV+SF ++L E++ G
Sbjct: 152 ADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYG 208
Query: 351 CPPFTMKHDNEVPKAYAARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIIT 408
P+ + + +V A + R P P +LY ++++ CW EK +RPTF + +
Sbjct: 209 KIPYPGRTNADVMTALSQGYRMPRVENCPDELY-----DIMKMCWKEKAEERPTFDYLQS 263
Query: 409 RLE 411
L+
Sbjct: 264 VLD 266
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 223 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 273
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 274 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 333
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHR+L N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 334 KN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 390
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 391 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 446
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 447 ---ELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 265 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 315
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+TE++ G+L +L+ + + + A I+ M YL +
Sbjct: 316 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 375
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHR+L N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 376 KN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 432
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 433 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 488
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 489 ---ELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 139/295 (47%), Gaps = 24/295 (8%)
Query: 131 KPLMAPMHVKHAREVPEYEIDPHELDFTNSVEITKGTFILAFWRGIQ-----VAVKKLGE 185
+PL V R VP+ + + D +I +G F F ++ VAVK
Sbjct: 90 QPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC-R 148
Query: 186 EVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG 245
E + D + + F E +L++ HPN+V+ +G TQ P+ IV E + GD FL+ +G
Sbjct: 149 ETLPPDLKAK-FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG 207
Query: 246 A-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLT 304
A L+ T ++ D A GM YL E+K IHRDL N L + LK++DFG+S+
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYL-ESKCC--IHRDLAARNCLVTEKNVLKISDFGMSR--- 261
Query: 305 VKEDRPLTCQDTSCR-----YVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKH 358
+E + R + APE Y ++ DV+SF ++L E G P+
Sbjct: 262 -EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320
Query: 359 DNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
+ + + R P +L + L+E+CW +P +RP+F I L+SI
Sbjct: 321 NQQTREFVEKGGRLPC---PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 130/270 (48%), Gaps = 28/270 (10%)
Query: 153 HELDFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
H+L E+ +G W+ + VAVK L E+ + V F E A++++I+HP
Sbjct: 24 HKLGGGQYGEVYEGV-----WKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 74
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHE 268
N+VQ LG T+ P I+ E++ G+L +L+ + + + A I+ M YL +
Sbjct: 75 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
IHRDL N L ++ +KVADFG+S+L+T ++ APE
Sbjct: 135 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEV----PKAYAARQRPPFKAPAKLYAR 383
++ K DV++F ++L E+ G P+ ++V K Y R P P K+Y
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVY-- 247
Query: 384 GLKELIEECWNEKPAKRPTFRQIITRLESI 413
EL+ CW P+ RP+F +I E++
Sbjct: 248 ---ELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 139/295 (47%), Gaps = 24/295 (8%)
Query: 131 KPLMAPMHVKHAREVPEYEIDPHELDFTNSVEITKGTFILAFWRGIQ-----VAVKKLGE 185
+PL V R VP+ + + D +I +G F F ++ VAVK
Sbjct: 90 QPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC-R 148
Query: 186 EVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG 245
E + D + + F E +L++ HPN+V+ +G TQ P+ IV E + GD FL+ +G
Sbjct: 149 ETLPPDLKAK-FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG 207
Query: 246 A-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLT 304
A L+ T ++ D A GM YL E+K IHRDL N L + LK++DFG+S+
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYL-ESKCC--IHRDLAARNCLVTEKNVLKISDFGMSR--- 261
Query: 305 VKEDRPLTCQDTSCR-----YVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKH 358
+E + R + APE Y ++ DV+SF ++L E G P+
Sbjct: 262 -EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320
Query: 359 DNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
+ + + R P +L + L+E+CW +P +RP+F I L+SI
Sbjct: 321 NQQTREFVEKGGRLPC---PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 125/250 (50%), Gaps = 15/250 (6%)
Query: 166 GTFILAFWRG-IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + W G +VA+K L +S + +F +E +++K++H +VQ L AV P
Sbjct: 23 GEVWMGTWNGNTKVAIKTLKPGTMSPE----SFLEEAQIMKKLKHDKLVQ-LYAVVSEEP 77
Query: 225 MMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+ IVTEY+ KG L FLK ALK V A +A GM Y+ + IHRDL +
Sbjct: 78 IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSA 134
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 342
NIL + K+ADFG+++L+ E ++ APE + K DV+SF +
Sbjct: 135 NILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 194
Query: 343 ILQEMI-EGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
+L E++ +G P+ ++ EV + R P + L EL+ CW + P +RP
Sbjct: 195 LLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPI---SLHELMIHCWKKDPEERP 251
Query: 402 TFRQIITRLE 411
TF + + LE
Sbjct: 252 TFEYLQSFLE 261
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 123/250 (49%), Gaps = 24/250 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K+ H N+V+ +G QS P I+ E + G
Sbjct: 76 LQVAVKTL-PEVCSEQDELD-FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGG 133
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDD 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+ N L
Sbjct: 134 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 190
Query: 289 SGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
G +VA DFG+++ + R C +++ PE F + +K D +SF ++L
Sbjct: 191 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 250
Query: 345 QEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
E+ G P+ K + EV + R PP P +Y ++ +CW +P RP
Sbjct: 251 WEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPEDRP 305
Query: 402 TFRQIITRLE 411
F I+ R+E
Sbjct: 306 NFAIILERIE 315
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 132/265 (49%), Gaps = 18/265 (6%)
Query: 159 NSVEITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGA 218
+S E+ G + R + VA+K L + + + R F E +++ + HPN+++ G
Sbjct: 61 DSGEVCYGRLRVPGQRDVPVAIKAL--KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGV 118
Query: 219 VTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHR 277
VT+ MIVTEY+ G L FL+ G V + GM YL + + +HR
Sbjct: 119 VTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHR 175
Query: 278 DLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYD 332
DL N+L D + KV+DFG+S++L ED P T+ R+ APE +
Sbjct: 176 DLAARNVLVDSNLVCKVSDFGLSRVL---EDDPDAAXTTTGGKIPIRWTAPEAIAFRTFS 232
Query: 333 TKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEE 391
+ DV+SF +++ E++ G P+ + +V + R P AP L +L+ +
Sbjct: 233 SASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP--APMGC-PHALHQLMLD 289
Query: 392 CWNEKPAKRPTFRQIITRLESINNS 416
CW++ A+RP F QI++ L+++ S
Sbjct: 290 CWHKDRAQRPRFSQIVSVLDALIRS 314
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 132/265 (49%), Gaps = 18/265 (6%)
Query: 159 NSVEITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGA 218
+S E+ G + R + VA+K L + + + R F E +++ + HPN+++ G
Sbjct: 61 DSGEVCYGRLRVPGQRDVPVAIKAL--KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGV 118
Query: 219 VTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHR 277
VT+ MIVTEY+ G L FL+ G V + GM YL + + +HR
Sbjct: 119 VTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHR 175
Query: 278 DLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS-----CRYVAPEVFKNEEYD 332
DL N+L D + KV+DFG+S++L ED P T+ R+ APE +
Sbjct: 176 DLAARNVLVDSNLVCKVSDFGLSRVL---EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFS 232
Query: 333 TKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEE 391
+ DV+SF +++ E++ G P+ + +V + R P AP L +L+ +
Sbjct: 233 SASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP--APMGC-PHALHQLMLD 289
Query: 392 CWNEKPAKRPTFRQIITRLESINNS 416
CW++ A+RP F QI++ L+++ S
Sbjct: 290 CWHKDRAQRPRFSQIVSVLDALIRS 314
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 123/250 (49%), Gaps = 24/250 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K+ H N+V+ +G QS P I+ E + G
Sbjct: 62 LQVAVKTL-PEVCSEQDELD-FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGG 119
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDD 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+ N L
Sbjct: 120 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 176
Query: 289 SGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
G +VA DFG+++ + R C +++ PE F + +K D +SF ++L
Sbjct: 177 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 236
Query: 345 QEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
E+ G P+ K + EV + R PP P +Y ++ +CW +P RP
Sbjct: 237 WEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPEDRP 291
Query: 402 TFRQIITRLE 411
F I+ R+E
Sbjct: 292 NFAIILERIE 301
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 24/250 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 76 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGG 133
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDD 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+ N L
Sbjct: 134 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 190
Query: 289 SGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
G +VA DFG+++ + R C +++ PE F + +K D +SF ++L
Sbjct: 191 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 250
Query: 345 QEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
E+ G P+ K + EV + R PP P +Y ++ +CW +P RP
Sbjct: 251 WEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPEDRP 305
Query: 402 TFRQIITRLE 411
F I+ R+E
Sbjct: 306 NFAIILERIE 315
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 24/250 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 61 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGG 118
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDD 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+ N L
Sbjct: 119 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 175
Query: 289 SGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
G +VA DFG+++ + R C +++ PE F + +K D +SF ++L
Sbjct: 176 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 235
Query: 345 QEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
E+ G P+ K + EV + R PP P +Y ++ +CW +P RP
Sbjct: 236 WEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPEDRP 290
Query: 402 TFRQIITRLE 411
F I+ R+E
Sbjct: 291 NFAIILERIE 300
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 24/250 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 53 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 110
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDD 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+ N L
Sbjct: 111 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 167
Query: 289 SGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
G +VA DFG+++ + R C +++ PE F + +K D +SF ++L
Sbjct: 168 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 227
Query: 345 QEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
E+ G P+ K + EV + R PP P +Y ++ +CW +P RP
Sbjct: 228 WEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPEDRP 282
Query: 402 TFRQIITRLE 411
F I+ R+E
Sbjct: 283 NFAIILERIE 292
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 24/250 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 68 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 125
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDD 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+ N L
Sbjct: 126 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 182
Query: 289 SGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
G +VA DFG+++ + R C +++ PE F + +K D +SF ++L
Sbjct: 183 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 242
Query: 345 QEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
E+ G P+ K + EV + R PP P +Y ++ +CW +P RP
Sbjct: 243 WEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPEDRP 297
Query: 402 TFRQIITRLE 411
F I+ R+E
Sbjct: 298 NFAIILERIE 307
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 24/250 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 61 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 118
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDD 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+ N L
Sbjct: 119 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 175
Query: 289 SGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
G +VA DFG+++ + R C +++ PE F + +K D +SF ++L
Sbjct: 176 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 235
Query: 345 QEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
E+ G P+ K + EV + R PP P +Y ++ +CW +P RP
Sbjct: 236 WEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPEDRP 290
Query: 402 TFRQIITRLE 411
F I+ R+E
Sbjct: 291 NFAIILERIE 300
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 24/250 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 62 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 119
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDD 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+ N L
Sbjct: 120 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 176
Query: 289 SGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
G +VA DFG+++ + R C +++ PE F + +K D +SF ++L
Sbjct: 177 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 236
Query: 345 QEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
E+ G P+ K + EV + R PP P +Y ++ +CW +P RP
Sbjct: 237 WEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPEDRP 291
Query: 402 TFRQIITRLE 411
F I+ R+E
Sbjct: 292 NFAIILERIE 301
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 24/250 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 78 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 135
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDD 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+ N L
Sbjct: 136 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 192
Query: 289 SGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
G +VA DFG+++ + R C +++ PE F + +K D +SF ++L
Sbjct: 193 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 252
Query: 345 QEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
E+ G P+ K + EV + R PP P +Y ++ +CW +P RP
Sbjct: 253 WEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPEDRP 307
Query: 402 TFRQIITRLE 411
F I+ R+E
Sbjct: 308 NFAIILERIE 317
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 24/250 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 62 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 119
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDD 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+ N L
Sbjct: 120 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 176
Query: 289 SGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
G +VA DFG+++ + R C +++ PE F + +K D +SF ++L
Sbjct: 177 PGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 236
Query: 345 QEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
E+ G P+ K + EV + R PP P +Y ++ +CW +P RP
Sbjct: 237 WEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPEDRP 291
Query: 402 TFRQIITRLE 411
F I+ R+E
Sbjct: 292 NFAIILERIE 301
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 24/250 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 102 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 159
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDD 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+ N L
Sbjct: 160 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 216
Query: 289 SGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
G +VA DFG+++ + R C +++ PE F + +K D +SF ++L
Sbjct: 217 PGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 276
Query: 345 QEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
E+ G P+ K + EV + R PP P +Y ++ +CW +P RP
Sbjct: 277 WEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPEDRP 331
Query: 402 TFRQIITRLE 411
F I+ R+E
Sbjct: 332 NFAIILERIE 341
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 24/250 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 76 LQVAVKTL-PEVYSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 133
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDD 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+ N L
Sbjct: 134 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 190
Query: 289 SGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
G +VA DFG+++ + R C +++ PE F + +K D +SF ++L
Sbjct: 191 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 250
Query: 345 QEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
E+ G P+ K + EV + R PP P +Y ++ +CW +P RP
Sbjct: 251 WEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPEDRP 305
Query: 402 TFRQIITRLE 411
F I+ R+E
Sbjct: 306 NFAIILERIE 315
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 24/250 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 79 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 136
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDD 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+ N L
Sbjct: 137 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 193
Query: 289 SGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
G +VA DFG+++ + R C +++ PE F + +K D +SF ++L
Sbjct: 194 PGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 253
Query: 345 QEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
E+ G P+ K + EV + R PP P +Y ++ +CW +P RP
Sbjct: 254 WEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPEDRP 308
Query: 402 TFRQIITRLE 411
F I+ R+E
Sbjct: 309 NFAIILERIE 318
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 24/250 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+QVAVK L EV S+ D + F E ++ K H N+V+ +G QS P I+ E + G
Sbjct: 88 LQVAVKTL-PEVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 145
Query: 236 DLRAFLK--RKGALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDD 288
DL++FL+ R +PS+ + A DIA G YL EN IHRD+ N L
Sbjct: 146 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 202
Query: 289 SGNLKVA---DFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
G +VA DFG+++ + R C +++ PE F + +K D +SF ++L
Sbjct: 203 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 262
Query: 345 QEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
E+ G P+ K + EV + R PP P +Y ++ +CW +P RP
Sbjct: 263 WEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY-----RIMTQCWQHQPEDRP 317
Query: 402 TFRQIITRLE 411
F I+ R+E
Sbjct: 318 NFAIILERIE 327
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 145/306 (47%), Gaps = 30/306 (9%)
Query: 138 HVKHAREVPEYE---IDPHELDFTNSVEITKGTFILAFWRGIQ------VAVKKLGEEVI 188
H A +VP + DP EL FT I KG+F F +GI VA+K + ++
Sbjct: 4 HSPVAVQVPGMQNNIADPEEL-FTKLERIGKGSFGEVF-KGIDNRTQQVVAIKII--DLE 59
Query: 189 SDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK 248
+D + + E+ +L + V ++ G+ + S + I+ EYL G L R G
Sbjct: 60 EAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL-RAGPFD 118
Query: 249 PSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKED 308
+I +G++YLH K IHRD++ +N+L + G++K+ADFGV+ LT +
Sbjct: 119 EFQIATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 175
Query: 309 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA 368
+ T T ++APEV + YD+K D++S + E+ +G PP + H V
Sbjct: 176 KRNTFVGTPF-WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK 234
Query: 369 RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS---------INH 419
P + + KE I+ C N+ P+ RPT ++++ + NS I+
Sbjct: 235 NNPPTLVGD---FTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSYLTELIDR 291
Query: 420 KRRWKV 425
+RWK
Sbjct: 292 FKRWKA 297
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 129/243 (53%), Gaps = 23/243 (9%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK L +S V+AF +E L++ ++H +V+ VT+ P+ I+TE++ KG
Sbjct: 38 KVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGS 93
Query: 237 LRAFLK--RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L FLK G + + F+ IA GM Y+ IHRDL +N+L +S K+
Sbjct: 94 LLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKI 150
Query: 295 ADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-G 350
ADFG+++++ ED T ++ + ++ APE + K +V+SF ++L E++ G
Sbjct: 151 ADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYG 207
Query: 351 CPPFTMKHDNEVPKAYAARQRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIIT 408
P+ + + +V A + R P P +LY ++++ CW EK +RPTF + +
Sbjct: 208 KIPYPGRTNADVMSALSQGYRMPRMENCPDELY-----DIMKMCWKEKAEERPTFDYLQS 262
Query: 409 RLE 411
L+
Sbjct: 263 VLD 265
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 142/288 (49%), Gaps = 23/288 (7%)
Query: 150 IDPHELDFTNSVEITKGTFILAFWRGIQVAVKKLGEEVISD----DDRVRAFRDELALLQ 205
+DP EL FT I KG+F ++GI K++ I D +D + + E+ +L
Sbjct: 15 VDPEEL-FTKLDRIGKGSF-GEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLS 72
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNY 265
+ P + ++ G+ +S+ + I+ EYL G LK G L+ + +I +G++Y
Sbjct: 73 QCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK-PGPLEETYIATILREILKGLDY 131
Query: 266 LHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEV 325
LH + IHRD++ +N+L + G++K+ADFGV+ LT + + T ++APEV
Sbjct: 132 LHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF-WMAPEV 187
Query: 326 FKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGL 385
K YD K D++S + E+ +G PP + H V P + +++
Sbjct: 188 IKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQ---HSKPF 244
Query: 386 KELIEECWNEKPAKRPTFRQI-----ITRLES----INNSINHKRRWK 424
KE +E C N+ P RPT +++ ITR + I+ +RWK
Sbjct: 245 KEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELIDRYKRWK 292
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 121/251 (48%), Gaps = 37/251 (14%)
Query: 196 AFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG----ALKPS 250
A EL +L + H N+V LGA T P +++TEY GDL FL+RK K S
Sbjct: 88 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 147
Query: 251 TAV--------------RFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
A+ F+ +A+GM +L IHRDL NIL K+ D
Sbjct: 148 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICD 204
Query: 297 FGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
FG+++ +K D + + +++APE N Y + DV+S+ + L E+ G
Sbjct: 205 FGLAR--DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 262
Query: 353 PF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITR 409
P+ M D++ K R P APA++Y ++++ CW+ P KRPTF+QI+
Sbjct: 263 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY-----DIMKTCWDADPLKRPTFKQIVQL 317
Query: 410 LE-SINNSINH 419
+E I+ S NH
Sbjct: 318 IEKQISESTNH 328
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 121/251 (48%), Gaps = 37/251 (14%)
Query: 196 AFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG----ALKPS 250
A EL +L + H N+V LGA T P +++TEY GDL FL+RK K S
Sbjct: 90 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 149
Query: 251 TAV--------------RFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
A+ F+ +A+GM +L IHRDL NIL K+ D
Sbjct: 150 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICD 206
Query: 297 FGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
FG+++ +K D + + +++APE N Y + DV+S+ + L E+ G
Sbjct: 207 FGLAR--DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 264
Query: 353 PF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITR 409
P+ M D++ K R P APA++Y ++++ CW+ P KRPTF+QI+
Sbjct: 265 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY-----DIMKTCWDADPLKRPTFKQIVQL 319
Query: 410 LE-SINNSINH 419
+E I+ S NH
Sbjct: 320 IEKQISESTNH 330
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 121/251 (48%), Gaps = 37/251 (14%)
Query: 196 AFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG----ALKPS 250
A EL +L + H N+V LGA T P +++TEY GDL FL+RK K S
Sbjct: 95 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 154
Query: 251 TAV--------------RFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
A+ F+ +A+GM +L IHRDL NIL K+ D
Sbjct: 155 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICD 211
Query: 297 FGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
FG+++ +K D + + +++APE N Y + DV+S+ + L E+ G
Sbjct: 212 FGLAR--HIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 269
Query: 353 PF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITR 409
P+ M D++ K R P APA++Y ++++ CW+ P KRPTF+QI+
Sbjct: 270 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY-----DIMKTCWDADPLKRPTFKQIVQL 324
Query: 410 LE-SINNSINH 419
+E I+ S NH
Sbjct: 325 IEKQISESTNH 335
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 121/251 (48%), Gaps = 37/251 (14%)
Query: 196 AFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG----ALKPS 250
A EL +L + H N+V LGA T P +++TEY GDL FL+RK K S
Sbjct: 72 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 131
Query: 251 TAV--------------RFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
A+ F+ +A+GM +L IHRDL NIL K+ D
Sbjct: 132 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICD 188
Query: 297 FGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
FG+++ +K D + + +++APE N Y + DV+S+ + L E+ G
Sbjct: 189 FGLAR--DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 246
Query: 353 PF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITR 409
P+ M D++ K R P APA++Y ++++ CW+ P KRPTF+QI+
Sbjct: 247 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY-----DIMKTCWDADPLKRPTFKQIVQL 301
Query: 410 LE-SINNSINH 419
+E I+ S NH
Sbjct: 302 IEKQISESTNH 312
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 134/266 (50%), Gaps = 24/266 (9%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 244
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+++L+ ED T + + ++ APE +
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ +G P+ + EV R P P + L +L+
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMC 415
Query: 391 ECWNEKPAKRPTFRQIITRLESINNS 416
+CW ++P +RPTF + LE S
Sbjct: 416 QCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 121/251 (48%), Gaps = 37/251 (14%)
Query: 196 AFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG----ALKPS 250
A EL +L + H N+V LGA T P +++TEY GDL FL+RK K S
Sbjct: 95 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 154
Query: 251 TAV--------------RFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
A+ F+ +A+GM +L IHRDL NIL K+ D
Sbjct: 155 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICD 211
Query: 297 FGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
FG+++ +K D + + +++APE N Y + DV+S+ + L E+ G
Sbjct: 212 FGLAR--DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 269
Query: 353 PF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITR 409
P+ M D++ K R P APA++Y ++++ CW+ P KRPTF+QI+
Sbjct: 270 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY-----DIMKTCWDADPLKRPTFKQIVQL 324
Query: 410 LE-SINNSINH 419
+E I+ S NH
Sbjct: 325 IEKQISESTNH 335
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 134/266 (50%), Gaps = 24/266 (9%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 244
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+++L+ ED T + + ++ APE +
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ +G P+ + EV R P P + L +L+
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMC 415
Query: 391 ECWNEKPAKRPTFRQIITRLESINNS 416
+CW ++P +RPTF + LE S
Sbjct: 416 QCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 149/283 (52%), Gaps = 24/283 (8%)
Query: 148 YEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDELALL 204
+EI+ E+ S I G+F + W G VAVK L + V ++ +AFR+E+A+L
Sbjct: 31 WEIEASEVML--STRIGSGSFGTVYKGKWHG-DVAVKIL-KVVDPTPEQFQAFRNEVAVL 86
Query: 205 QKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIARGM 263
+K RH N++ F+G +T+ + + IVT++ L L ++ + + A A+GM
Sbjct: 87 RKTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGM 145
Query: 264 NYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT-SCRYVA 322
+YLH IIHRD++ +NI + +K+ DFG++ + + Q T S ++A
Sbjct: 146 DYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 323 PEVFK---NEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNE-----VPKAYAARQRPPF 374
PEV + N + + DV+S+ ++L E++ G P++ ++ + V + YA+ P
Sbjct: 203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYAS---PDL 259
Query: 375 KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 417
K + +K L+ +C + +RP F QI++ +E + +S+
Sbjct: 260 SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 130/263 (49%), Gaps = 18/263 (6%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 14 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 68
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 69 YAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 125
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK 334
+HRDL +NIL ++ KVADFG+++L+ E ++ APE + K
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 335 VDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 393
DV+SF ++L E+ +G P+ + EV R P P + L +L+ +CW
Sbjct: 186 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMCQCW 242
Query: 394 NEKPAKRPTFRQIITRLESINNS 416
++P +RPTF + LE S
Sbjct: 243 RKEPEERPTFEYLQAFLEDYFTS 265
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 134/266 (50%), Gaps = 24/266 (9%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 17 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 71
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 72 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 128
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+++L+ ED T + + ++ APE +
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 185
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ +G P+ + EV R P P + L +L+
Sbjct: 186 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMC 242
Query: 391 ECWNEKPAKRPTFRQIITRLESINNS 416
+CW ++P +RPTF + LE S
Sbjct: 243 QCWRKEPEERPTFEYLQAFLEDYFTS 268
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 133/266 (50%), Gaps = 24/266 (9%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++KIRH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKIRHEKLVQ-L 78
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+++L+ ED T + + ++ APE +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ +G P+ + EV R P P + L +L+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMC 249
Query: 391 ECWNEKPAKRPTFRQIITRLESINNS 416
+CW + P +RPTF + LE S
Sbjct: 250 QCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 31/261 (11%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 59 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 233 PKGDLRAFLKRKG------ALKPS----------TAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + + PS V A +ARGM YL K IH
Sbjct: 117 SKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 173
Query: 277 RDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV 335
RDL N+L + +K+ADFG+++ + + + T +++APE + Y +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E+ G P+ E+ K R P +LY ++ +C
Sbjct: 234 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM-----MMRDC 288
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ P++RPTF+Q++ L+ I
Sbjct: 289 WHAVPSQRPTFKQLVEDLDRI 309
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 32/265 (12%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 327
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 328 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 384
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+++L+ ED T + + ++ APE +
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 441
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNE----VPKAYAARQRPPFKAPAKLYARGLK 386
K DV+SF ++L E+ +G P+ + E V + Y R P + P L+
Sbjct: 442 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY--RMPCPPECPESLH----- 494
Query: 387 ELIEECWNEKPAKRPTFRQIITRLE 411
+L+ +CW ++P +RPTF + LE
Sbjct: 495 DLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 133/266 (50%), Gaps = 24/266 (9%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 15 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 69
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 70 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 126
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+++L+ ED T + + ++ APE +
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 183
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ +G P+ + EV R P P + L +L+
Sbjct: 184 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMC 240
Query: 391 ECWNEKPAKRPTFRQIITRLESINNS 416
+CW + P +RPTF + LE S
Sbjct: 241 QCWRKDPEERPTFEYLQAFLEDYFTS 266
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 133/266 (50%), Gaps = 24/266 (9%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+++L+ ED T + + ++ APE +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ +G P+ + EV R P P + L +L+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMC 249
Query: 391 ECWNEKPAKRPTFRQIITRLESINNS 416
+CW + P +RPTF + LE S
Sbjct: 250 QCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 133/266 (50%), Gaps = 24/266 (9%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 13 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 67
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 68 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 124
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+++L+ ED T + + ++ APE +
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 181
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ +G P+ + EV R P P + L +L+
Sbjct: 182 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMC 238
Query: 391 ECWNEKPAKRPTFRQIITRLESINNS 416
+CW + P +RPTF + LE S
Sbjct: 239 QCWRKDPEERPTFEYLQAFLEDYFTS 264
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 133/266 (50%), Gaps = 24/266 (9%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+++L+ ED T + + ++ APE +
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ +G P+ + EV R P P + L +L+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMC 249
Query: 391 ECWNEKPAKRPTFRQIITRLESINNS 416
+CW + P +RPTF + LE S
Sbjct: 250 QCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 16/227 (7%)
Query: 195 RAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAV 253
R F E +++ + HPN+++ G VT S P+MI+TE++ G L +FL+ G V
Sbjct: 60 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 119
Query: 254 RFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTC 313
IA GM YL E + +HRDL NIL + + KV+DFG+S+ L P
Sbjct: 120 GMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYT 176
Query: 314 QDTS----CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAA 368
R+ APE ++ + D +S+ +++ E++ G P+ + +V A
Sbjct: 177 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ 236
Query: 369 RQR--PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
R PP P L+ +L+ +CW + RP F Q+++ L+ +
Sbjct: 237 DYRLPPPPDCPTSLH-----QLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 16/227 (7%)
Query: 195 RAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAV 253
R F E +++ + HPN+++ G VT S P+MI+TE++ G L +FL+ G V
Sbjct: 62 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 121
Query: 254 RFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTC 313
IA GM YL E + +HRDL NIL + + KV+DFG+S+ L P
Sbjct: 122 GMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTET 178
Query: 314 QDTS----CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAA 368
R+ APE ++ + D +S+ +++ E++ G P+ + +V A
Sbjct: 179 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ 238
Query: 369 RQR--PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
R PP P L+ +L+ +CW + RP F Q+++ L+ +
Sbjct: 239 DYRLPPPPDCPTSLH-----QLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 31/261 (11%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 59 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 233 PKGDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + L V A +ARGM YL K IH
Sbjct: 117 SKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 173
Query: 277 RDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV 335
RDL N+L + +K+ADFG+++ + + + T +++APE + Y +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E+ G P+ E+ K R P +LY ++ +C
Sbjct: 234 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM-----MMRDC 288
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ P++RPTF+Q++ L+ I
Sbjct: 289 WHAVPSQRPTFKQLVEDLDRI 309
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 115/233 (49%), Gaps = 10/233 (4%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VAVK L + I D V R E+ L+ RHP++++ ++ S + +V EY+
Sbjct: 41 GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G+L ++ + G L + R I G++Y H + ++HRDL+P N+L D N K+
Sbjct: 101 GELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKI 157
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFALILQEMIEGCPP 353
ADFG+S +++ E +C S Y APEV Y +VD++S +IL ++ G P
Sbjct: 158 ADFGLSNMMSDGEFLRXSC--GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLP 215
Query: 354 FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
F D+ VP + F P L + L++ P KR T + I
Sbjct: 216 FD---DDHVPTLFKKICDGIFYTPQYLNP-SVISLLKHMLQVDPMKRATIKDI 264
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 31/261 (11%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 52 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 109
Query: 233 PKGDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + L V A +ARGM YL K IH
Sbjct: 110 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 166
Query: 277 RDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV 335
RDL N+L + +K+ADFG+++ + + + T +++APE + Y +
Sbjct: 167 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 226
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E+ G P+ E+ K R P +LY ++ +C
Sbjct: 227 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM-----MMRDC 281
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ P++RPTF+Q++ L+ I
Sbjct: 282 WHAVPSQRPTFKQLVEDLDRI 302
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 31/261 (11%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 59 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 233 PKGDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + L V A +ARGM YL K IH
Sbjct: 117 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 173
Query: 277 RDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV 335
RDL N+L + +K+ADFG+++ + + + T +++APE + Y +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E+ G P+ E+ K R P +LY ++ +C
Sbjct: 234 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM-----MMRDC 288
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ P++RPTF+Q++ L+ I
Sbjct: 289 WHAVPSQRPTFKQLVEDLDRI 309
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 31/261 (11%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 100 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 157
Query: 233 PKGDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + L V A +ARGM YL K IH
Sbjct: 158 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 214
Query: 277 RDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV 335
RDL N+L + +K+ADFG+++ + + + T +++APE + Y +
Sbjct: 215 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 274
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E+ G P+ E+ K R P +LY ++ +C
Sbjct: 275 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM-----MMRDC 329
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ P++RPTF+Q++ L+ I
Sbjct: 330 WHAVPSQRPTFKQLVEDLDRI 350
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 31/261 (11%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 51 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 108
Query: 233 PKGDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + L V A +ARGM YL K IH
Sbjct: 109 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 165
Query: 277 RDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV 335
RDL N+L + +K+ADFG+++ + + + T +++APE + Y +
Sbjct: 166 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 225
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E+ G P+ E+ K R P +LY ++ +C
Sbjct: 226 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM-----MMRDC 280
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ P++RPTF+Q++ L+ I
Sbjct: 281 WHAVPSQRPTFKQLVEDLDRI 301
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 31/261 (11%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 48 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 105
Query: 233 PKGDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + L V A +ARGM YL K IH
Sbjct: 106 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 162
Query: 277 RDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV 335
RDL N+L + +K+ADFG+++ + + + T +++APE + Y +
Sbjct: 163 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 222
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E+ G P+ E+ K R P +LY ++ +C
Sbjct: 223 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM-----MMRDC 277
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ P++RPTF+Q++ L+ I
Sbjct: 278 WHAVPSQRPTFKQLVEDLDRI 298
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 31/261 (11%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 59 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 233 PKGDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + L V A +ARGM YL K IH
Sbjct: 117 SKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 173
Query: 277 RDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV 335
RDL N+L + +K+ADFG+++ + + + T +++APE + Y +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E+ G P+ E+ K R P +LY ++ +C
Sbjct: 234 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM-----MMRDC 288
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ P++RPTF+Q++ L+ I
Sbjct: 289 WHAVPSQRPTFKQLVEDLDRI 309
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 31/261 (11%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYL 232
R +VAVK L + D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 44 RVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 101
Query: 233 PKGDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
KG+LR +L+ + L V A +ARGM YL K IH
Sbjct: 102 SKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIH 158
Query: 277 RDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV 335
RDL N+L + +K+ADFG+++ + + + T +++APE + Y +
Sbjct: 159 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 218
Query: 336 DVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEEC 392
DV+SF ++L E+ G P+ E+ K R P +LY ++ +C
Sbjct: 219 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM-----MMRDC 273
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W+ P++RPTF+Q++ L+ I
Sbjct: 274 WHAVPSQRPTFKQLVEDLDRI 294
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 24/266 (9%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 21 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 75
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V + IA GM Y+ +
Sbjct: 76 YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNY 132
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+++L+ ED T + + ++ APE +
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEWTARQGAKFPIKWTAPEAALYGRF 189
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ +G P+ + EV R P P + L +L+
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMC 246
Query: 391 ECWNEKPAKRPTFRQIITRLESINNS 416
+CW ++P +RPTF + LE S
Sbjct: 247 QCWRKEPEERPTFEYLQAFLEDYFTS 272
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 24/266 (9%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 21 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 75
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V + IA GM Y+ +
Sbjct: 76 YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNY 132
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+++L+ ED T + + ++ APE +
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 189
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ +G P+ + EV R P P + L +L+
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMC 246
Query: 391 ECWNEKPAKRPTFRQIITRLESINNS 416
+CW ++P +RPTF + LE S
Sbjct: 247 QCWRKEPEERPTFEYLQAFLEDYFTS 272
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 133/266 (50%), Gaps = 24/266 (9%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 244
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IV EY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 245 YAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+++L+ ED T + + ++ APE +
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ +G P+ + EV R P P + L +L+
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMC 415
Query: 391 ECWNEKPAKRPTFRQIITRLESINNS 416
+CW ++P +RPTF + LE S
Sbjct: 416 QCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 133/266 (50%), Gaps = 24/266 (9%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 79 YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+++L+ ED T + + ++ APE +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ +G P+ + EV R P P + L +L+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMC 249
Query: 391 ECWNEKPAKRPTFRQIITRLESINNS 416
+CW + P +RPTF + LE S
Sbjct: 250 QCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 132/266 (49%), Gaps = 24/266 (9%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 191 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE----AFLQEAQVMKKLRHEKLVQ-L 245
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IVTEY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 246 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 302
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+ +L+ ED T + + ++ APE +
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 359
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ +G P+ + EV R P P + L +L+
Sbjct: 360 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMC 416
Query: 391 ECWNEKPAKRPTFRQIITRLESINNS 416
+CW + P +RPTF + LE S
Sbjct: 417 QCWRKDPEERPTFEYLQAFLEDYFTS 442
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 31/260 (11%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 67 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 234 KGDLRAFL--KRKGALKPS--------------TAVRFALDIARGMNYLHENKPVPIIHR 277
KG+LR +L +R ++ S V +ARGM YL K IHR
Sbjct: 125 KGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHR 181
Query: 278 DLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 336
DL N+L ++ +K+ADFG+++ + + + T +++APE + Y + D
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSD 241
Query: 337 VFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECW 393
V+SF +++ E+ G P+ E+ K R P +LY ++ +CW
Sbjct: 242 VWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM-----MMRDCW 296
Query: 394 NEKPAKRPTFRQIITRLESI 413
+ P++RPTF+Q++ L+ I
Sbjct: 297 HAVPSQRPTFKQLVEDLDRI 316
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 128/263 (48%), Gaps = 18/263 (6%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IV EY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK 334
+HRDL +NIL ++ KVADFG+++L+ E ++ APE + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 335 VDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECW 393
DV+SF ++L E+ +G P+ + EV R P P + L +L+ +CW
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMCQCW 252
Query: 394 NEKPAKRPTFRQIITRLESINNS 416
+ P +RPTF + LE S
Sbjct: 253 RKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 132/266 (49%), Gaps = 24/266 (9%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IV EY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 79 YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+++L+ ED T + + ++ APE +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ +G P+ + EV R P P + L +L+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMC 249
Query: 391 ECWNEKPAKRPTFRQIITRLESINNS 416
+CW + P +RPTF + LE S
Sbjct: 250 QCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 10/233 (4%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VAVK L + I D V + E+ L+ RHP++++ ++ + +V EY+
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G+L ++ + G ++ A R I ++Y H + ++HRDL+P N+L D N K+
Sbjct: 96 GELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKI 152
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFALILQEMIEGCPP 353
ADFG+S +++ E +C S Y APEV Y +VD++S +IL ++ G P
Sbjct: 153 ADFGLSNMMSDGEFLRTSC--GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
Query: 354 FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
F D VP + + F P L R + L+ P KR T + I
Sbjct: 211 FD---DEHVPTLFKKIRGGVFYIPEYL-NRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 130/264 (49%), Gaps = 39/264 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ +D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 67 AVTVAVKMLKDDATEED--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDI--------------------ARGMNYLHENKPVP 273
KG+LR +L+ A +P + ++ DI ARGM YL K
Sbjct: 125 KGNLREYLR---ARRPP-GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--- 177
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYD 332
IHRDL N+L ++ +K+ADFG+++ + + + T +++APE + Y
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 333 TKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELI 389
+ DV+SF +++ E+ G P+ E+ K R P +LY ++
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM-----MM 292
Query: 390 EECWNEKPAKRPTFRQIITRLESI 413
+CW+ P++RPTF+Q++ L+ I
Sbjct: 293 RDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 129/264 (48%), Gaps = 39/264 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 67 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDI--------------------ARGMNYLHENKPVP 273
KG+LR +L+ A +P + ++ DI ARGM YL K
Sbjct: 125 KGNLREYLR---ARRPP-GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--- 177
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYD 332
IHRDL N+L ++ +K+ADFG+++ + + + T +++APE + Y
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 333 TKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELI 389
+ DV+SF +++ E+ G P+ E+ K R P +LY ++
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM-----MM 292
Query: 390 EECWNEKPAKRPTFRQIITRLESI 413
+CW+ P++RPTF+Q++ L+ I
Sbjct: 293 RDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 38/260 (14%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
++VAVK L +D+ A EL ++ + +H N+V LGA T P++++TEY
Sbjct: 77 LKVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 235 GDLRAFLKRKG---------ALKPSTA-----VRFALDIARGMNYLHENKPVPIIHRDLE 280
GDL FL+RK A+ STA + F+ +A+GM +L IHRD+
Sbjct: 135 GDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVA 191
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDV 337
N+L + K+ DFG+++ + D + + +++APE + Y + DV
Sbjct: 192 ARNVLLTNGHVAKIGDFGLAR--DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 338 FSFALILQEMIE-GCPPF-----TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEE 391
+S+ ++L E+ G P+ K V Y Q P F AP +Y+ +++
Sbjct: 250 WSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ-PAF-APKNIYS-----IMQA 302
Query: 392 CWNEKPAKRPTFRQIITRLE 411
CW +P RPTF+QI + L+
Sbjct: 303 CWALEPTHRPTFQQICSFLQ 322
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 132/266 (49%), Gaps = 24/266 (9%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IV EY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+++L+ ED T + + ++ APE +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ +G P+ + EV R P P + L +L+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMC 249
Query: 391 ECWNEKPAKRPTFRQIITRLESINNS 416
+CW + P +RPTF + LE S
Sbjct: 250 QCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 129/264 (48%), Gaps = 39/264 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 67 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYAS 124
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDI--------------------ARGMNYLHENKPVP 273
KG+LR +L+ A +P + ++ DI ARGM YL K
Sbjct: 125 KGNLREYLR---ARRPP-GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--- 177
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYD 332
IHRDL N+L ++ +K+ADFG+++ + + + T +++APE + Y
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 333 TKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELI 389
+ DV+SF +++ E+ G P+ E+ K R P +LY ++
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM-----MM 292
Query: 390 EECWNEKPAKRPTFRQIITRLESI 413
+CW+ P++RPTF+Q++ L+ I
Sbjct: 293 RDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 36 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 87
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P+G++ L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 88 VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 144
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 145 LLGSAGELKIADFGWS-VHAPSSRRTTLC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 201
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 202 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 257
Query: 405 QII 407
+++
Sbjct: 258 EVL 260
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 24/246 (9%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 32 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 83
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 84 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 140
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEEYDTKVDVFSFA 341
L +G LK+ADFG S P + +DT C Y+ PE+ + +D KVD++S
Sbjct: 141 LLGSAGELKIADFGWSV------HAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 194
Query: 342 LILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
++ E + G PPF N + Y R F P G ++LI P++RP
Sbjct: 195 VLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRP 250
Query: 402 TFRQII 407
R+++
Sbjct: 251 MLREVL 256
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 129/264 (48%), Gaps = 39/264 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 59 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 116
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDI--------------------ARGMNYLHENKPVP 273
KG+LR +L+ A +P + ++ DI ARGM YL K
Sbjct: 117 KGNLREYLR---ARRPP-GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--- 169
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYD 332
IHRDL N+L ++ +K+ADFG+++ + + + T +++APE + Y
Sbjct: 170 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 229
Query: 333 TKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELI 389
+ DV+SF +++ E+ G P+ E+ K R P +LY ++
Sbjct: 230 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM-----MM 284
Query: 390 EECWNEKPAKRPTFRQIITRLESI 413
+CW+ P++RPTF+Q++ L+ I
Sbjct: 285 RDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 131/252 (51%), Gaps = 24/252 (9%)
Query: 168 FILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
++ + + +VAVK + +S V AF E +++ ++H +V+ L AV P+ I
Sbjct: 205 WMATYNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYI 259
Query: 228 VTEYLPKGDLRAFLKR-KGALKP-STAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL 285
+TE++ KG L FLK +G+ +P + F+ IA GM ++ + IHRDL +NIL
Sbjct: 260 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANIL 316
Query: 286 RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFAL 342
S K+ADFG+++++ ED T ++ + ++ APE + K DV+SF +
Sbjct: 317 VSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGI 373
Query: 343 ILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAK 399
+L E++ G P+ + EV +A R P P +LY ++ CW +P +
Sbjct: 374 LLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELY-----NIMMRCWKNRPEE 428
Query: 400 RPTFRQIITRLE 411
RPTF I + L+
Sbjct: 429 RPTFEYIQSVLD 440
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 129/264 (48%), Gaps = 39/264 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 56 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 113
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDI--------------------ARGMNYLHENKPVP 273
KG+LR +L+ A +P + ++ DI ARGM YL K
Sbjct: 114 KGNLREYLR---ARRPP-GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--- 166
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYD 332
IHRDL N+L ++ +K+ADFG+++ + + + T +++APE + Y
Sbjct: 167 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 226
Query: 333 TKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELI 389
+ DV+SF +++ E+ G P+ E+ K R P +LY ++
Sbjct: 227 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM-----MM 281
Query: 390 EECWNEKPAKRPTFRQIITRLESI 413
+CW+ P++RPTF+Q++ L+ I
Sbjct: 282 RDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 129/264 (48%), Gaps = 39/264 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 54 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 111
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDI--------------------ARGMNYLHENKPVP 273
KG+LR +L+ A +P + ++ DI ARGM YL K
Sbjct: 112 KGNLREYLR---ARRPP-GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--- 164
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYD 332
IHRDL N+L ++ +K+ADFG+++ + + + T +++APE + Y
Sbjct: 165 CIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 224
Query: 333 TKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELI 389
+ DV+SF +++ E+ G P+ E+ K R P +LY ++
Sbjct: 225 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM-----MM 279
Query: 390 EECWNEKPAKRPTFRQIITRLESI 413
+CW+ P++RPTF+Q++ L+ I
Sbjct: 280 RDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 129/264 (48%), Gaps = 39/264 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 67 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDI--------------------ARGMNYLHENKPVP 273
KG+LR +L+ A +P + ++ DI ARGM YL K
Sbjct: 125 KGNLREYLR---ARRPP-GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--- 177
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYD 332
IHRDL N+L ++ +K+ADFG+++ + + + T +++APE + Y
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYT 237
Query: 333 TKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELI 389
+ DV+SF +++ E+ G P+ E+ K R P +LY ++
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM-----MM 292
Query: 390 EECWNEKPAKRPTFRQIITRLESI 413
+CW+ P++RPTF+Q++ L+ I
Sbjct: 293 RDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 10/233 (4%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VAVK L + I D V + E+ L+ RHP++++ ++ + +V EY+
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G+L ++ + G ++ A R I ++Y H + ++HRDL+P N+L D N K+
Sbjct: 96 GELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKI 152
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFALILQEMIEGCPP 353
ADFG+S +++ E +C S Y APEV Y +VD++S +IL ++ G P
Sbjct: 153 ADFGLSNMMSDGEFLRDSC--GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
Query: 354 FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
F D VP + + F P L R + L+ P KR T + I
Sbjct: 211 FD---DEHVPTLFKKIRGGVFYIPEYL-NRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 129/264 (48%), Gaps = 39/264 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 67 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYAS 124
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDI--------------------ARGMNYLHENKPVP 273
KG+LR +L+ A +P + ++ DI ARGM YL K
Sbjct: 125 KGNLREYLR---ARRPP-GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--- 177
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYD 332
IHRDL N+L ++ +K+ADFG+++ + + + T +++APE + Y
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 333 TKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELI 389
+ DV+SF +++ E+ G P+ E+ K R P +LY ++
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM-----MM 292
Query: 390 EECWNEKPAKRPTFRQIITRLESI 413
+CW+ P++RPTF+Q++ L+ I
Sbjct: 293 RDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 127/243 (52%), Gaps = 24/243 (9%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + +S V AF E +++ ++H +V+ L AV P+ I+TE++ KG
Sbjct: 41 KVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGS 95
Query: 237 LRAFLKR-KGALKP-STAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L FLK +G+ +P + F+ IA GM ++ + IHRDL +NIL S K+
Sbjct: 96 LLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKI 152
Query: 295 ADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-G 350
ADFG+++++ ED T ++ + ++ APE + K DV+SF ++L E++ G
Sbjct: 153 ADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 209
Query: 351 CPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIIT 408
P+ + EV +A R P P +LY ++ CW +P +RPTF I +
Sbjct: 210 RIPYPGMSNPEVIRALERGYRMPRPENCPEELY-----NIMMRCWKNRPEERPTFEYIQS 264
Query: 409 RLE 411
L+
Sbjct: 265 VLD 267
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 132/266 (49%), Gaps = 24/266 (9%)
Query: 161 VEITKGTF---ILAFWRGI-QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
V++ +G F + W G +VA+K L +S + AF E +++K+RH +VQ L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ-L 78
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGA--LKPSTAVRFALDIARGMNYLHENKPVPI 274
AV P+ IV EY+ KG L FLK + L+ V A IA GM Y+ +
Sbjct: 79 YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEY 331
+HRDL +NIL ++ KVADFG+++L+ ED T + + ++ APE +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 332 DTKVDVFSFALILQEM-IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
K DV+SF ++L E+ +G P+ + EV R P P + L +L+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP--CPPEC-PESLHDLMC 249
Query: 391 ECWNEKPAKRPTFRQIITRLESINNS 416
+CW + P +RPTF + LE S
Sbjct: 250 QCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 129/264 (48%), Gaps = 39/264 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 113 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 170
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDI--------------------ARGMNYLHENKPVP 273
KG+LR +L+ A +P + ++ DI ARGM YL K
Sbjct: 171 KGNLREYLR---ARRPP-GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--- 223
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYD 332
IHRDL N+L ++ +K+ADFG+++ + + + T +++APE + Y
Sbjct: 224 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 283
Query: 333 TKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELI 389
+ DV+SF +++ E+ G P+ E+ K R P +LY ++
Sbjct: 284 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM-----MM 338
Query: 390 EECWNEKPAKRPTFRQIITRLESI 413
+CW+ P++RPTF+Q++ L+ I
Sbjct: 339 RDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 120/235 (51%), Gaps = 25/235 (10%)
Query: 192 DRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL-RAFLKRKGALKPS 250
++ + F+ E+ ++ + HPN+V+ G + +P +V E++P GDL L + +K S
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 251 TAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILR---DDSGNL--KVADFGVSKLLTV 305
+R LDIA G+ Y+ P PI+HRDL NI D++ + KVADFG+S+
Sbjct: 123 VKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---- 177
Query: 306 KEDRPLTCQDTSCRYVAPEVFKNEE--YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVP 363
+ ++ + +++APE EE Y K D +SFA+IL ++ G PF ++
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 364 KAYAARQ---RP--PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
R+ RP P P +L + +IE CW+ P KRP F I+ L +
Sbjct: 238 FINMIREEGLRPTIPEDCPPRL-----RNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 129/264 (48%), Gaps = 39/264 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ EY
Sbjct: 67 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDI--------------------ARGMNYLHENKPVP 273
KG+LR +L+ A +P + ++ DI ARGM YL K
Sbjct: 125 KGNLREYLR---ARRPP-GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--- 177
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYD 332
IHRDL N+L ++ +++ADFG+++ + + + T +++APE + Y
Sbjct: 178 CIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 333 TKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELI 389
+ DV+SF +++ E+ G P+ E+ K R P +LY ++
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM-----MM 292
Query: 390 EECWNEKPAKRPTFRQIITRLESI 413
+CW+ P++RPTF+Q++ L+ I
Sbjct: 293 RDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 111/240 (46%), Gaps = 18/240 (7%)
Query: 168 FILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
FILA + ++K G E R E+ + +RHPN+++ G S+ + +
Sbjct: 34 FILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDSTRVYL 85
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
+ EY P G + L++ + ++A ++Y H K +IHRD++P N+L
Sbjct: 86 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK---VIHRDIKPENLLLG 142
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
+G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++ E
Sbjct: 143 SAGELKIADFGWS-VHAPSSRRAALC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
Query: 348 IEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
+ G PPF N Y R F P G ++LI P++RP R+++
Sbjct: 200 LVGKPPFEA---NTYQDTYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 119/235 (50%), Gaps = 25/235 (10%)
Query: 192 DRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL-RAFLKRKGALKPS 250
++ + F+ E+ ++ + HPN+V+ G + +P +V E++P GDL L + +K S
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 251 TAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILR---DDSGNL--KVADFGVSKLLTV 305
+R LDIA G+ Y+ P PI+HRDL NI D++ + KVADFG S+
Sbjct: 123 VKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---- 177
Query: 306 KEDRPLTCQDTSCRYVAPEVFKNEE--YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVP 363
+ ++ + +++APE EE Y K D +SFA+IL ++ G PF ++
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 364 KAYAARQ---RP--PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
R+ RP P P +L + +IE CW+ P KRP F I+ L +
Sbjct: 238 FINMIREEGLRPTIPEDCPPRL-----RNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 34/256 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
++VAVK L +D+ A EL ++ + +H N+V LGA T P++++TEY
Sbjct: 69 LKVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 126
Query: 235 GDLRAFLKRKGA----------LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
GDL FL+RK L+ + F+ +A+GM +L IHRD+ N+
Sbjct: 127 GDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNV 183
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFA 341
L + K+ DFG+++ + D + + +++APE + Y + DV+S+
Sbjct: 184 LLTNGHVAKIGDFGLAR--DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 241
Query: 342 LILQEMIE-GCPPF-----TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNE 395
++L E+ G P+ K V Y Q P F AP +Y+ +++ CW
Sbjct: 242 ILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ-PAF-APKNIYS-----IMQACWAL 294
Query: 396 KPAKRPTFRQIITRLE 411
+P RPTF+QI + L+
Sbjct: 295 EPTHRPTFQQICSFLQ 310
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 114/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 36 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 87
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P+G++ L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 88 VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 144
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R T Y+ PE+ + +D KVD++S ++
Sbjct: 145 LLGSAGELKIADFGWS--VHAPSSRRXXLXGT-LDYLPPEMIEGRMHDEKVDLWSLGVLC 201
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 202 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 257
Query: 405 QII 407
+++
Sbjct: 258 EVL 260
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 42/266 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ--SSPMMIVTEYL 232
G QVAVK L E S + + + E+ +L+ + H N+V++ G T+ + + ++ E+L
Sbjct: 38 GEQVAVKSLKPE--SGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G L+ +L K K + +++A+ I +GM+YL + +HRDL N+L +
Sbjct: 96 PSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQ 152
Query: 292 LKVADFGVSKLL-------TVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
+K+ DFG++K + TVK+DR D+ + APE ++ DV+SF + L
Sbjct: 153 VKIGDFGLTKAIETDKEXXTVKDDR-----DSPVFWYAPECLMQSKFYIASDVWSFGVTL 207
Query: 345 QEMIEGC----PPFT------------MKHDNEVPKAYAARQRP-PFKAPAKLYARGLKE 387
E++ C P M V ++ P P P ++Y +
Sbjct: 208 HELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVY-----Q 262
Query: 388 LIEECWNEKPAKRPTFRQIITRLESI 413
L+ +CW +P+ R +F+ +I E++
Sbjct: 263 LMRKCWEFQPSNRTSFQNLIEGFEAL 288
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 46/268 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK L E + +R E +L+++ HP+V++ GA +Q P++++ EY G L
Sbjct: 56 VAVKMLKEN--ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 238 RAFLKRKGALKPST------------------------AVRFALDIARGMNYLHENKPVP 273
R FL+ + P + FA I++GM YL E K
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--- 170
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD-TSCRYVAPEVFKNEEYD 332
++HRDL NIL + +K++DFG+S+ + ++ Q +++A E + Y
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 333 TKVDVFSFALILQEMIE-------GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGL 385
T+ DV+SF ++L E++ G PP + + + R P ++Y
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT----GHRMERPDNCSEEMY---- 282
Query: 386 KELIEECWNEKPAKRPTFRQIITRLESI 413
L+ +CW ++P KRP F I LE +
Sbjct: 283 -RLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 126/260 (48%), Gaps = 38/260 (14%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
++VAVK L +D+ A EL ++ + +H N+V LGA T P++++TEY
Sbjct: 77 LKVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 235 GDLRAFLKRKG---------ALKPST-----AVRFALDIARGMNYLHENKPVPIIHRDLE 280
GDL FL+RK A+ ST + F+ +A+GM +L IHRD+
Sbjct: 135 GDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN---CIHRDVA 191
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDV 337
N+L + K+ DFG+++ + D + + +++APE + Y + DV
Sbjct: 192 ARNVLLTNGHVAKIGDFGLAR--DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 338 FSFALILQEMIE-GCPPF-----TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEE 391
+S+ ++L E+ G P+ K V Y Q P F AP +Y+ +++
Sbjct: 250 WSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ-PAF-APKNIYS-----IMQA 302
Query: 392 CWNEKPAKRPTFRQIITRLE 411
CW +P RPTF+QI + L+
Sbjct: 303 CWALEPTHRPTFQQICSFLQ 322
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 46/268 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK L E + +R E +L+++ HP+V++ GA +Q P++++ EY G L
Sbjct: 56 VAVKMLKEN--ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 238 RAFLKRKGALKPST------------------------AVRFALDIARGMNYLHENKPVP 273
R FL+ + P + FA I++GM YL E K
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--- 170
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD-TSCRYVAPEVFKNEEYD 332
++HRDL NIL + +K++DFG+S+ + ++ Q +++A E + Y
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 333 TKVDVFSFALILQEMIE-------GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGL 385
T+ DV+SF ++L E++ G PP + + + R P ++Y
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT----GHRMERPDNCSEEMY---- 282
Query: 386 KELIEECWNEKPAKRPTFRQIITRLESI 413
L+ +CW ++P KRP F I LE +
Sbjct: 283 -RLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 15/219 (6%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+G+ YL E I+HRD++PSNIL + G +K+ DFGVS L D +
Sbjct: 114 IKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRS 168
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQEMIEG---CPPFTMKHDNEVPKA------YAARQ 370
Y++PE + Y + D++S L L EM G PP K D+ P A Y +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNE 228
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITR 409
PP K P+ +++ ++ + +C + PA+R +Q++
Sbjct: 229 PPP-KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 266
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 42/266 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ--SSPMMIVTEYL 232
G QVAVK L E S + + + E+ +L+ + H N+V++ G T+ + + ++ E+L
Sbjct: 50 GEQVAVKSLKPE--SGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G L+ +L K K + +++A+ I +GM+YL + +HRDL N+L +
Sbjct: 108 PSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQ 164
Query: 292 LKVADFGVSKLL-------TVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
+K+ DFG++K + TVK+DR D+ + APE ++ DV+SF + L
Sbjct: 165 VKIGDFGLTKAIETDKEXXTVKDDR-----DSPVFWYAPECLMQSKFYIASDVWSFGVTL 219
Query: 345 QEMIEGC----PPFT------------MKHDNEVPKAYAARQRP-PFKAPAKLYARGLKE 387
E++ C P M V ++ P P P ++Y +
Sbjct: 220 HELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVY-----Q 274
Query: 388 LIEECWNEKPAKRPTFRQIITRLESI 413
L+ +CW +P+ R +F+ +I E++
Sbjct: 275 LMRKCWEFQPSNRTSFQNLIEGFEAL 300
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 34/256 (13%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
++VAVK L +D+ A EL ++ + +H N+V LGA T P++++TEY
Sbjct: 77 LKVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 235 GDLRAFLKRKGA----------LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
GDL FL+RK L+ + F+ +A+GM +L IHRD+ N+
Sbjct: 135 GDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNV 191
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKVDVFSFA 341
L + K+ DFG+++ + D + + +++APE + Y + DV+S+
Sbjct: 192 LLTNGHVAKIGDFGLAR--DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 249
Query: 342 LILQEMIE-GCPPF-----TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNE 395
++L E+ G P+ K V Y Q P F AP +Y+ +++ CW
Sbjct: 250 ILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ-PAF-APKNIYS-----IMQACWAL 302
Query: 396 KPAKRPTFRQIITRLE 411
+P RPTF+QI + L+
Sbjct: 303 EPTHRPTFQQICSFLQ 318
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 24/246 (9%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 34 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 85
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 142
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEEYDTKVDVFSFA 341
L +G LK+ADFG S P + + T C Y+ PE+ + +D KVD++S
Sbjct: 143 LLGSAGELKIADFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 342 LILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
++ E + G PPF N + Y R F P G ++LI P++RP
Sbjct: 197 VLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRP 252
Query: 402 TFRQII 407
R+++
Sbjct: 253 MLREVL 258
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 39/264 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ Y
Sbjct: 67 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYAS 124
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDI--------------------ARGMNYLHENKPVP 273
KG+LR +L+ A +P + ++ DI ARGM YL K
Sbjct: 125 KGNLREYLR---ARRPP-GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--- 177
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYD 332
IHRDL N+L ++ +K+ADFG+++ + + + T +++APE + Y
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 333 TKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELI 389
+ DV+SF +++ E+ G P+ E+ K R P +LY ++
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM-----MM 292
Query: 390 EECWNEKPAKRPTFRQIITRLESI 413
+CW+ P++RPTF+Q++ L+ I
Sbjct: 293 RDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 24/246 (9%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 34 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 85
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 142
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEEYDTKVDVFSFA 341
L +G LK+ADFG S P + +D C Y+ PE+ + +D KVD++S
Sbjct: 143 LLGSAGELKIADFGWSV------HAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 342 LILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
++ E + G PPF N + Y R F P G ++LI P++RP
Sbjct: 197 VLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRP 252
Query: 402 TFRQII 407
R+++
Sbjct: 253 MLREVL 258
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 24/243 (9%)
Query: 168 FILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
FILA + ++K G E R E+ + +RHPN+++ G ++ + +
Sbjct: 31 FILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
+ EY P G + L++ + ++A ++Y H + +IHRD++P N+L
Sbjct: 83 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLG 139
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEEYDTKVDVFSFALIL 344
+G LK+ADFG S P + + T C Y+ PE+ + +D KVD++S ++
Sbjct: 140 SAGELKIADFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLC 193
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 194 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 249
Query: 405 QII 407
+++
Sbjct: 250 EVL 252
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 123/268 (45%), Gaps = 46/268 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK L E + +R E +L+++ HP+V++ GA +Q P++++ EY G L
Sbjct: 56 VAVKMLKEN--ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 238 RAFLKRKGALKPST------------------------AVRFALDIARGMNYLHENKPVP 273
R FL+ + P + FA I++GM YL E +
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MS 170
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD-TSCRYVAPEVFKNEEYD 332
++HRDL NIL + +K++DFG+S+ + ++ Q +++A E + Y
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 333 TKVDVFSFALILQEMIE-------GCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGL 385
T+ DV+SF ++L E++ G PP + + + R P ++Y
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT----GHRMERPDNCSEEMY---- 282
Query: 386 KELIEECWNEKPAKRPTFRQIITRLESI 413
L+ +CW ++P KRP F I LE +
Sbjct: 283 -RLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 24/246 (9%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 30 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 81
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 82 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 138
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEEYDTKVDVFSFA 341
L +G LK+ADFG S P + + T C Y+ PE+ + +D KVD++S
Sbjct: 139 LLGSAGELKIADFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 192
Query: 342 LILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
++ E + G PPF N + Y R F P G ++LI P++RP
Sbjct: 193 VLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRP 248
Query: 402 TFRQII 407
R+++
Sbjct: 249 MLREVL 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 39/264 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ VAVK L ++ D + E+ +++ I +H N++ LGA TQ P+ ++ Y
Sbjct: 67 AVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYAS 124
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDI--------------------ARGMNYLHENKPVP 273
KG+LR +L+ A +P + ++ DI ARGM YL K
Sbjct: 125 KGNLREYLR---ARRPP-GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--- 177
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYD 332
IHRDL N+L ++ +K+ADFG+++ + + + T +++APE + Y
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 333 TKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELI 389
+ DV+SF +++ E+ G P+ E+ K R P +LY ++
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM-----MM 292
Query: 390 EECWNEKPAKRPTFRQIITRLESI 413
+CW+ P++RPTF+Q++ L+ I
Sbjct: 293 RDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 24/246 (9%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 35 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 86
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 87 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 143
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEEYDTKVDVFSFA 341
L +G LK+ADFG S P + + T C Y+ PE+ + +D KVD++S
Sbjct: 144 LLGSAGELKIADFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 197
Query: 342 LILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
++ E + G PPF N + Y R F P G ++LI P++RP
Sbjct: 198 VLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRP 253
Query: 402 TFRQII 407
R+++
Sbjct: 254 MLREVL 259
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 32 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 83
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 84 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 140
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S R T T Y+ PE+ + +D KVD++S ++
Sbjct: 141 LLGSAGELKIADFGWS--CHAPSSRRTTLSGT-LDYLPPEMIEGRMHDEKVDLWSLGVLC 197
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 198 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 253
Query: 405 QII 407
+++
Sbjct: 254 EVL 256
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 34 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 85
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 142
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 143 LLGSAGELKIADFGWS-VHAPSSRRXXLC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 199
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 200 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 255
Query: 405 QII 407
+++
Sbjct: 256 EVL 258
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 31 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 139
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 140 LLGSAGELKIADFGWS-VHAPSSRRTXLC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 196
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 197 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 252
Query: 405 QII 407
+++
Sbjct: 253 EVL 255
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 24/246 (9%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 34 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 85
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 142
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEEYDTKVDVFSFA 341
L +G LK+ADFG S P + + T C Y+ PE+ + +D KVD++S
Sbjct: 143 LLGSAGELKIADFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 342 LILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
++ E + G PPF N + Y R F P G ++LI P++RP
Sbjct: 197 VLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRP 252
Query: 402 TFRQII 407
R+++
Sbjct: 253 MLREVL 258
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 36 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 87
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 88 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 144
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE + +D KVD++S ++
Sbjct: 145 LLGSAGELKIADFGWS-VHAPSSRRTTLC--GTLDYLPPEXIEGRXHDEKVDLWSLGVLC 201
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 202 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPXLR 257
Query: 405 QII 407
+++
Sbjct: 258 EVL 260
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 31 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 139
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 140 LLGSAGELKIADFGWS-VHAPSSRRXXLC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 196
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 197 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 252
Query: 405 QII 407
+++
Sbjct: 253 EVL 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 31 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 139
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 140 LLGSAGELKIADFGWS-VHAPSSRRAALC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 196
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 197 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 252
Query: 405 QII 407
+++
Sbjct: 253 EVL 255
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 47/269 (17%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
++VAVK L +D+ A EL ++ + +H N+V LGA T P++++TEY
Sbjct: 62 LKVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 119
Query: 235 GDLRAFLKRK--GALKPSTA---------------------VRFALDIARGMNYLHENKP 271
GDL FL+RK L PS A + F+ +A+GM +L
Sbjct: 120 GDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN- 178
Query: 272 VPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKN 328
IHRD+ N+L + K+ DFG+++ + D + + +++APE +
Sbjct: 179 --CIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMNDSNYIVKGNARLPVKWMAPESIFD 234
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPF-----TMKHDNEVPKAYAARQRPPFKAPAKLYA 382
Y + DV+S+ ++L E+ G P+ K V Y Q P F AP +Y+
Sbjct: 235 CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ-PAF-APKNIYS 292
Query: 383 RGLKELIEECWNEKPAKRPTFRQIITRLE 411
+++ CW +P RPTF+QI + L+
Sbjct: 293 -----IMQACWALEPTHRPTFQQICSFLQ 316
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 36 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 87
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 88 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 144
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 145 LLGSAGELKIADFGWS-VHAPSSRRTTLC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 201
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 202 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 257
Query: 405 QII 407
+++
Sbjct: 258 EVL 260
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 34 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 85
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 142
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 143 LLGSAGELKIADFGWS-VHAPSSRRAALC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 199
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 200 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 255
Query: 405 QII 407
+++
Sbjct: 256 EVL 258
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 31 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 139
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 140 LLGSAGELKIADFGWS-VHAPSSRRTTLC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 196
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 197 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 252
Query: 405 QII 407
+++
Sbjct: 253 EVL 255
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 48 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 99
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 100 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 156
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 157 LLGSAGELKIADFGWS-VHAPSSRRTTLC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 213
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 214 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 269
Query: 405 QII 407
+++
Sbjct: 270 EVL 272
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 33 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 84
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 85 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 141
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 142 LLGSAGELKIADFGWS-VHAPSSRRXXLC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 198
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 199 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 254
Query: 405 QII 407
+++
Sbjct: 255 EVL 257
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 120/246 (48%), Gaps = 23/246 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L +E++ +V DE +L + HP +++ G + + ++ +Y+
Sbjct: 31 GRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 90
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G+L + L++ A +A ++ + YLH II+RDL+P NIL D +G++K+
Sbjct: 91 GELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKI 147
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K V + C + Y+APEV + Y+ +D +SF +++ EM+ G PF
Sbjct: 148 TDFGFAKY--VPDVTYXLC--GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
Query: 355 TMKHDNEVPKAY-----AARQRPPF------KAPAKLYARGLKELIEECWN--EKPAKRP 401
+D+ K Y A + PPF ++L R L + + N E P
Sbjct: 204 ---YDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP 260
Query: 402 TFRQII 407
F++++
Sbjct: 261 WFKEVV 266
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 15/256 (5%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ +G + I VAVK ++ D+ F E +++ + HP++V+ +G + +
Sbjct: 23 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHPHIVKLIG-IIE 79
Query: 222 SSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
P I+ E P G+L +L+R K +LK T V ++L I + M YL + + +HRD+
Sbjct: 80 EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL---ESINCVHRDIA 136
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 340
NIL +K+ DFG+S+ + ++ + ++++PE + T DV+ F
Sbjct: 137 VRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMF 196
Query: 341 ALILQEMIE-GCPPFTMKHDNEVPKAYAARQR--PPFKAPAKLYARGLKELIEECWNEKP 397
A+ + E++ G PF + +V R P P LY L+ CW+ P
Sbjct: 197 AVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYT-----LMTRCWDYDP 251
Query: 398 AKRPTFRQIITRLESI 413
+ RP F +++ L +
Sbjct: 252 SDRPRFTELVCSLSDV 267
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 15/256 (5%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ +G + I VAVK ++ D+ F E +++ + HP++V+ +G + +
Sbjct: 27 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHPHIVKLIG-IIE 83
Query: 222 SSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
P I+ E P G+L +L+R K +LK T V ++L I + M YL + + +HRD+
Sbjct: 84 EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL---ESINCVHRDIA 140
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 340
NIL +K+ DFG+S+ + ++ + ++++PE + T DV+ F
Sbjct: 141 VRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMF 200
Query: 341 ALILQEMIE-GCPPFTMKHDNEVPKAYAARQR--PPFKAPAKLYARGLKELIEECWNEKP 397
A+ + E++ G PF + +V R P P LY L+ CW+ P
Sbjct: 201 AVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYT-----LMTRCWDYDP 255
Query: 398 AKRPTFRQIITRLESI 413
+ RP F +++ L +
Sbjct: 256 SDRPRFTELVCSLSDV 271
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 24/246 (9%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 57 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 108
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 109 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 165
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEEYDTKVDVFSFA 341
L +G LK+ADFG S P + +D C Y+ PE+ + +D KVD++S
Sbjct: 166 LLGSAGELKIADFGWSV------HAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 219
Query: 342 LILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
++ E + G PPF N + Y R F P G ++LI P++RP
Sbjct: 220 VLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRP 275
Query: 402 TFRQII 407
R+++
Sbjct: 276 MLREVL 281
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 119/235 (50%), Gaps = 25/235 (10%)
Query: 192 DRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL-RAFLKRKGALKPS 250
++ + F+ E+ ++ + HPN+V+ G + +P +V E++P GDL L + +K S
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 251 TAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILR---DDSGNL--KVADFGVSKLLTV 305
+R LDIA G+ Y+ P PI+HRDL NI D++ + KVADF +S+
Sbjct: 123 VKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---- 177
Query: 306 KEDRPLTCQDTSCRYVAPEVFKNEE--YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVP 363
+ ++ + +++APE EE Y K D +SFA+IL ++ G PF ++
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 364 KAYAARQ---RP--PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
R+ RP P P +L + +IE CW+ P KRP F I+ L +
Sbjct: 238 FINMIREEGLRPTIPEDCPPRL-----RNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 15/256 (5%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQ 221
E+ +G + I VAVK ++ D+ F E +++ + HP++V+ +G + +
Sbjct: 39 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHPHIVKLIG-IIE 95
Query: 222 SSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
P I+ E P G+L +L+R K +LK T V ++L I + M YL + +HRD+
Sbjct: 96 EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIA 152
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 340
NIL +K+ DFG+S+ + ++ + ++++PE + T DV+ F
Sbjct: 153 VRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMF 212
Query: 341 ALILQEMIE-GCPPFTMKHDNEVPKAYAARQR--PPFKAPAKLYARGLKELIEECWNEKP 397
A+ + E++ G PF + +V R P P LY L+ CW+ P
Sbjct: 213 AVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYT-----LMTRCWDYDP 267
Query: 398 AKRPTFRQIITRLESI 413
+ RP F +++ L +
Sbjct: 268 SDRPRFTELVCSLSDV 283
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 57 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 108
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 109 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 165
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 166 LLGSAGELKIADFGWS-VHAPSSRRTTLC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 222
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 223 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 278
Query: 405 QII 407
+++
Sbjct: 279 EVL 281
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 36 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 87
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 88 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 144
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 145 LLGSAGELKIADFGWS-VHAPSSRRTDLC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 201
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 202 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 257
Query: 405 QII 407
+++
Sbjct: 258 EVL 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 31 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 139
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 140 LLGSAGELKIADFGWS-VHAPSSRRTDLC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 196
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 197 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 252
Query: 405 QII 407
+++
Sbjct: 253 EVL 255
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 31 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 139
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 140 LLGSAGELKIADFGWS-VHAPSSRRTELC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 196
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 197 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 252
Query: 405 QII 407
+++
Sbjct: 253 EVL 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 32 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 83
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 84 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 140
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 141 LLGSAGELKIADFGWS-VHAPSSRRTDLC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 197
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 198 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 253
Query: 405 QII 407
+++
Sbjct: 254 EVL 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 31 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 83 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 139
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+ADFG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 140 LLGSAGELKIADFGWS-VHAPSSRRTDLC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 196
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 197 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 252
Query: 405 QII 407
+++
Sbjct: 253 EVL 255
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 24/246 (9%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 34 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 85
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 86 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 142
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEEYDTKVDVFSFA 341
L +G LK+A+FG S P + + T C Y+ PE+ + +D KVD++S
Sbjct: 143 LLGSAGELKIANFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 342 LILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
++ E + G PPF N + Y R F P G ++LI P++RP
Sbjct: 197 VLCYEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRP 252
Query: 402 TFRQII 407
R+++
Sbjct: 253 MLREVL 258
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 33 QSKFILALKVLFKAQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 84
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 85 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 141
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
L +G LK+A+FG S + R C + Y+ PE+ + +D KVD++S ++
Sbjct: 142 LLGSAGELKIANFGWS-VHAPSSRRTTLC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 198
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
E + G PPF N + Y R F P G ++LI P++RP R
Sbjct: 199 YEFLVGKPPFEA---NTYQETYKRISRVEFTFP-DFVTEGARDLISRLLKHNPSQRPMLR 254
Query: 405 QII 407
+++
Sbjct: 255 EVL 257
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 136/283 (48%), Gaps = 29/283 (10%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 8 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 58
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 59 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 117
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ----D 315
ARGM+YLH IIHRDL+ +NI + +K+ DFG L TVK + Q
Sbjct: 118 ARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFG---LATVKSRWSGSHQFEQLS 171
Query: 316 TSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFT--MKHDNEVPKAYAARQ 370
S ++APEV + ++ Y + DV++F ++L E++ G P++ D +
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 231
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
P + +K L+ EC +K +RP+F +I+ +E +
Sbjct: 232 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 33/261 (12%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVK+L S D+ R F+ E+ +L+ + +V++ G + +V EYL
Sbjct: 39 GALVAVKQLQH---SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 95
Query: 233 PKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR FL+R A L S + ++ I +GM YL + +HRDL NIL + +
Sbjct: 96 PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAH 152
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ADFG++KLL + +D + + + + APE + + + DV+SF ++L E+
Sbjct: 153 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
Query: 349 ---EGCPPFT-----MKHDNEVPK--------AYAARQRPPFKAPAKLYARGLKELIEEC 392
+ C P M + +VP R P PA+++ EL++ C
Sbjct: 213 YCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAPPACPAEVH-----ELMKLC 267
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W P RP+F + +L+ +
Sbjct: 268 WAPSPQDRPSFSALGPQLDML 288
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 33/261 (12%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG-AVTQSSP-MMIVTEYL 232
G VAVK+L S D+ R F+ E+ +L+ + +V++ G + P + +V EYL
Sbjct: 36 GALVAVKQLQH---SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYL 92
Query: 233 PKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR FL+R A L S + ++ I +GM YL + +HRDL NIL + +
Sbjct: 93 PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAH 149
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ADFG++KLL + +D + + + + APE + + + DV+SF ++L E+
Sbjct: 150 VKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
Query: 349 ---EGCPPFT-----MKHDNEVPK--------AYAARQRPPFKAPAKLYARGLKELIEEC 392
+ C P M + +VP R P PA+++ EL++ C
Sbjct: 210 YCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVH-----ELMKLC 264
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W P RP+F + +L+ +
Sbjct: 265 WAPSPQDRPSFSALGPQLDML 285
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 136/277 (49%), Gaps = 21/277 (7%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEA 62
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 63 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 120
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+ + YL + +HRD+ N+L + +K+ DFG+S+ + + +
Sbjct: 121 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK 177
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYAARQRPPF--KA 376
++APE + + DV+ F + + E ++ G PF +N+V +R P
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 237
Query: 377 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 238 PPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 40/262 (15%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
++VAVK L +D+ A EL ++ + +H N+V LGA T P++++TEY
Sbjct: 77 LKVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 235 GDLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRD 278
GDL FL+RK L + F+ +A+GM +L IHRD
Sbjct: 135 GDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKN---CIHRD 191
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKNEEYDTKV 335
+ N+L + K+ DFG+++ + D + + +++APE + Y +
Sbjct: 192 VAARNVLLTNGHVAKIGDFGLAR--DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 249
Query: 336 DVFSFALILQEMIE-GCPPF-----TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELI 389
DV+S+ ++L E+ G P+ K V Y Q P F AP +Y+ ++
Sbjct: 250 DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ-PAF-APKNIYS-----IM 302
Query: 390 EECWNEKPAKRPTFRQIITRLE 411
+ CW +P RPTF+QI + L+
Sbjct: 303 QACWALEPTHRPTFQQICSFLQ 324
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 33/261 (12%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVK+L S D+ R F+ E+ +L+ + +V++ G + +V EYL
Sbjct: 52 GALVAVKQLQH---SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 108
Query: 233 PKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR FL+R A L S + ++ I +GM YL + +HRDL NIL + +
Sbjct: 109 PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAH 165
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ADFG++KLL + +D + + + + APE + + + DV+SF ++L E+
Sbjct: 166 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
Query: 349 ---EGCPPFT-----MKHDNEVPK--------AYAARQRPPFKAPAKLYARGLKELIEEC 392
+ C P M + +VP R P PA+++ EL++ C
Sbjct: 226 YCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVH-----ELMKLC 280
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W P RP+F + +L+ +
Sbjct: 281 WAPSPQDRPSFSALGPQLDML 301
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 33/261 (12%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVK+L S D+ R F+ E+ +L+ + +V++ G + +V EYL
Sbjct: 40 GALVAVKQLQH---SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 96
Query: 233 PKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR FL+R A L S + ++ I +GM YL + +HRDL NIL + +
Sbjct: 97 PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAH 153
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ADFG++KLL + +D + + + + APE + + + DV+SF ++L E+
Sbjct: 154 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
Query: 349 ---EGCPPFT-----MKHDNEVPK--------AYAARQRPPFKAPAKLYARGLKELIEEC 392
+ C P M + +VP R P PA+++ EL++ C
Sbjct: 214 YCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVH-----ELMKLC 268
Query: 393 WNEKPAKRPTFRQIITRLESI 413
W P RP+F + +L+ +
Sbjct: 269 WAPSPQDRPSFSALGPQLDML 289
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 126/263 (47%), Gaps = 18/263 (6%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VAVK + + ++ + FR E+ +++
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKV 69
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + +V EY G++ +L G +K A I + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF 326
H+ I+HRDL+ N+L D N+K+ADFG S T C S Y APE+F
Sbjct: 130 HQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELF 184
Query: 327 KNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPPFKAPAKLYARG 384
+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R PF +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF-----YMSTD 239
Query: 385 LKELIEECWNEKPAKRPTFRQII 407
+ L+++ P+KR T QI+
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIM 262
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 126/263 (47%), Gaps = 18/263 (6%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VAVK + + ++ + FR E+ +++
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKV 69
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + +V EY G++ +L G +K A I + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF 326
H+ I+HRDL+ N+L D N+K+ADFG S T C S Y APE+F
Sbjct: 130 HQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELF 184
Query: 327 KNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPPFKAPAKLYARG 384
+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R PF +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF-----YMSTD 239
Query: 385 LKELIEECWNEKPAKRPTFRQII 407
+ L+++ P+KR T QI+
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIM 262
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 117/231 (50%), Gaps = 11/231 (4%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VA+K + +++ D E++ L+ +RHP++++ +T + +++V EY G+
Sbjct: 36 KVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGE 94
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++ K + RF I + Y H +K I+HRDL+P N+L DD+ N+K+AD
Sbjct: 95 LFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIAD 151
Query: 297 FGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFALILQEMIEGCPPFT 355
FG+S ++T +C S Y APEV + Y +VDV+S ++L M+ G PF
Sbjct: 152 FGLSNIMTDGNFLKTSC--GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
Query: 356 MKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
D +P + + P L + G + LI P +R T ++I
Sbjct: 210 ---DEFIPNLFKKVNSCVYVMPDFL-SPGAQSLIRRMIVADPMQRITIQEI 256
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 18/263 (6%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VA+K + + ++ + FR E+ +++
Sbjct: 9 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKI 67
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + ++ EY G++ +L G +K A I + Y
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYC 127
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF 326
H+ + I+HRDL+ N+L D N+K+ADFG S TV C S Y APE+F
Sbjct: 128 HQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC--GSPPYAAPELF 182
Query: 327 KNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPPFKAPAKLYARG 384
+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R PF +
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF-----YMSTD 237
Query: 385 LKELIEECWNEKPAKRPTFRQII 407
+ L++ P KR T QI+
Sbjct: 238 CENLLKRFLVLNPIKRGTLEQIM 260
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 36/267 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 57 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR +L K K + +++ I +GM YL + IHRDL NIL ++
Sbjct: 114 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 170
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ DFG++K+L ++ + ++ + APE ++ DV+SF ++L E+
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
Query: 349 ----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
PP + H E+ K RP P ++Y ++
Sbjct: 231 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYM-----IMT 284
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSI 417
ECWN +RP+FR + R++ I +++
Sbjct: 285 ECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 13/235 (5%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VAVK + + ++ + FR E+ +++ + HPN+V+ + + +V EY
Sbjct: 32 GKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 90
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ +L G +K A I + Y H+ I+HRDL+ N+L D N+K+
Sbjct: 91 GEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQK---FIVHRDLKAENLLLDADMNIKI 147
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT-KVDVFSFALILQEMIEGCPP 353
ADFG S T C S Y APE+F+ ++YD +VDV+S +IL ++ G P
Sbjct: 148 ADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
Query: 354 FTMKHDNEV-PKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
F ++ E+ + + R PF + L+++ P+KR T QI+
Sbjct: 206 FDGQNLKELRERVLRGKYRIPFYMSTD-----CENLLKKFLILNPSKRGTLEQIM 255
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 136/277 (49%), Gaps = 21/277 (7%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEA 62
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 63 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 120
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+ + YL + +HRD+ N+L + +K+ DFG+S+ + + +
Sbjct: 121 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYAARQRPPF--KA 376
++APE + + DV+ F + + E ++ G PF +N+V +R P
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 237
Query: 377 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 238 PPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 36/267 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 39 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR +L K K + +++ I +GM YL + IHRDL NIL ++
Sbjct: 96 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 152
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ DFG++K+L ++ + ++ + APE ++ DV+SF ++L E+
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
Query: 349 ----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
PP + H E+ K RP P ++Y ++
Sbjct: 213 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYM-----IMT 266
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSI 417
ECWN +RP+FR + R++ I +++
Sbjct: 267 ECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 136/277 (49%), Gaps = 21/277 (7%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEA 67
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 68 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 125
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+ + YL + +HRD+ N+L + +K+ DFG+S+ + + +
Sbjct: 126 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 182
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYAARQRPPF--KA 376
++APE + + DV+ F + + E ++ G PF +N+V +R P
Sbjct: 183 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 242
Query: 377 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 243 PPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 36/267 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 38 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 94
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR +L K K + +++ I +GM YL + IHRDL NIL ++
Sbjct: 95 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 151
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ DFG++K+L ++ + ++ + APE ++ DV+SF ++L E+
Sbjct: 152 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
Query: 349 ----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
PP + H E+ K RP P ++Y ++
Sbjct: 212 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYM-----IMT 265
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSI 417
ECWN +RP+FR + R++ I +++
Sbjct: 266 ECWNNNVNQRPSFRDLALRVDQIRDNM 292
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 36/267 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 57 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR +L K K + +++ I +GM YL + IHRDL NIL ++
Sbjct: 114 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 170
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ DFG++K+L ++ + ++ + APE ++ DV+SF ++L E+
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
Query: 349 ----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
PP + H E+ K RP P ++Y ++
Sbjct: 231 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYM-----IMT 284
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSI 417
ECWN +RP+FR + R++ I +++
Sbjct: 285 ECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 136/277 (49%), Gaps = 21/277 (7%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEA 62
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 63 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 120
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+ + YL + +HRD+ N+L + +K+ DFG+S+ + + +
Sbjct: 121 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYAARQRPPF--KA 376
++APE + + DV+ F + + E ++ G PF +N+V +R P
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 237
Query: 377 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 238 PPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 36/267 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 46 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 102
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR +L K K + +++ I +GM YL + IHRDL NIL ++
Sbjct: 103 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 159
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ DFG++K+L ++ + ++ + APE ++ DV+SF ++L E+
Sbjct: 160 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
Query: 349 ----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
PP + H E+ K RP P ++Y ++
Sbjct: 220 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYM-----IMT 273
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSI 417
ECWN +RP+FR + R++ I +++
Sbjct: 274 ECWNNNVNQRPSFRDLALRVDQIRDNM 300
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 36/267 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 39 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR +L K K + +++ I +GM YL + IHRDL NIL ++
Sbjct: 96 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 152
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ DFG++K+L ++ + ++ + APE ++ DV+SF ++L E+
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
Query: 349 ----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
PP + H E+ K RP P ++Y ++
Sbjct: 213 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYM-----IMT 266
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSI 417
ECWN +RP+FR + R++ I +++
Sbjct: 267 ECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 36/267 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 42 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR +L K K + +++ I +GM YL + IHRDL NIL ++
Sbjct: 99 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 155
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ DFG++K+L ++ + ++ + APE ++ DV+SF ++L E+
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
Query: 349 ----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
PP + H E+ K RP P ++Y ++
Sbjct: 216 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYM-----IMT 269
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSI 417
ECWN +RP+FR + R++ I +++
Sbjct: 270 ECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 136/277 (49%), Gaps = 21/277 (7%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 7 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEA 65
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 66 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 123
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+ + YL + +HRD+ N+L + +K+ DFG+S+ + + +
Sbjct: 124 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 180
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYAARQRPPF--KA 376
++APE + + DV+ F + + E ++ G PF +N+V +R P
Sbjct: 181 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 240
Query: 377 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 241 PPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 136/277 (49%), Gaps = 21/277 (7%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 32 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEA 90
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 91 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 148
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+ + YL + +HRD+ N+L + +K+ DFG+S+ + + +
Sbjct: 149 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 205
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYAARQRPPF--KA 376
++APE + + DV+ F + + E ++ G PF +N+V +R P
Sbjct: 206 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 265
Query: 377 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 266 PPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 142/290 (48%), Gaps = 35/290 (12%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 9 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 59
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 60 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 118
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ----D 315
A+GM+YLH IIHRDL+ +NI + +K+ DFG L TVK + Q
Sbjct: 119 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG---LATVKSRWSGSHQFEQLS 172
Query: 316 TSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE-----VPKAYA 367
S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ + V + Y
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 368 ARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 417
+ P + +K L+ EC +K +RP F QI+ +E + S+
Sbjct: 233 S---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 279
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 36/267 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 45 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 101
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR +L K K + +++ I +GM YL + IHRDL NIL ++
Sbjct: 102 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 158
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ DFG++K+L ++ + ++ + APE ++ DV+SF ++L E+
Sbjct: 159 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
Query: 349 ----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
PP + H E+ K RP P ++Y ++
Sbjct: 219 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYM-----IMT 272
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSI 417
ECWN +RP+FR + R++ I +++
Sbjct: 273 ECWNNNVNQRPSFRDLALRVDQIRDNM 299
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 36/267 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 43 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 99
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR +L K K + +++ I +GM YL + IHRDL NIL ++
Sbjct: 100 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 156
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ DFG++K+L ++ + ++ + APE ++ DV+SF ++L E+
Sbjct: 157 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
Query: 349 ----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
PP + H E+ K RP P ++Y ++
Sbjct: 217 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYM-----IMT 270
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSI 417
ECWN +RP+FR + R++ I +++
Sbjct: 271 ECWNNNVNQRPSFRDLALRVDQIRDNM 297
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 142/290 (48%), Gaps = 35/290 (12%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 6 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 56
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 57 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 115
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ----D 315
A+GM+YLH IIHRDL+ +NI + +K+ DFG L TVK + Q
Sbjct: 116 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG---LATVKSRWSGSHQFEQLS 169
Query: 316 TSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE-----VPKAYA 367
S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ + V + Y
Sbjct: 170 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 229
Query: 368 ARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 417
+ P + +K L+ EC +K +RP F QI+ +E + S+
Sbjct: 230 S---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 276
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 136/277 (49%), Gaps = 21/277 (7%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEA 59
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 60 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 117
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+ + YL + +HRD+ N+L + +K+ DFG+S+ + + +
Sbjct: 118 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 174
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYAARQRPPF--KA 376
++APE + + DV+ F + + E ++ G PF +N+V +R P
Sbjct: 175 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 234
Query: 377 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 235 PPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 136/277 (49%), Gaps = 21/277 (7%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 6 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEA 64
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 65 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 122
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+ + YL + +HRD+ N+L + +K+ DFG+S+ + + +
Sbjct: 123 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 179
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYAARQRPPF--KA 376
++APE + + DV+ F + + E ++ G PF +N+V +R P
Sbjct: 180 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 239
Query: 377 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 240 PPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 36/267 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 44 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 100
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR +L K K + +++ I +GM YL + IHRDL NIL ++
Sbjct: 101 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 157
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ DFG++K+L ++ + ++ + APE ++ DV+SF ++L E+
Sbjct: 158 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
Query: 349 ----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
PP + H E+ K RP P ++Y ++
Sbjct: 218 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYM-----IMT 271
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSI 417
ECWN +RP+FR + R++ I +++
Sbjct: 272 ECWNNNVNQRPSFRDLALRVDQIRDNM 298
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 127/267 (47%), Gaps = 36/267 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 37 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 93
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR +L K K + +++ I +GM YL + IHRDL NIL ++
Sbjct: 94 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 150
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ DFG++K+L ++ + ++ + APE ++ DV+SF ++L E+
Sbjct: 151 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
Query: 349 ----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
PP + H E+ K RP P ++Y ++
Sbjct: 211 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYM-----IMT 264
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSI 417
ECWN +RP+FR + R++ I + +
Sbjct: 265 ECWNNNVNQRPSFRDLALRVDQIRDQM 291
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 142/290 (48%), Gaps = 35/290 (12%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 9 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 59
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 60 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 118
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ----D 315
A+GM+YLH IIHRDL+ +NI + +K+ DFG L TVK + Q
Sbjct: 119 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG---LATVKSRWSGSHQFEQLS 172
Query: 316 TSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE-----VPKAYA 367
S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ + V + Y
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 368 ARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 417
+ P + +K L+ EC +K +RP F QI+ +E + S+
Sbjct: 233 S---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 279
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 142/290 (48%), Gaps = 35/290 (12%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 32 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 82
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 83 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 141
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ----D 315
A+GM+YLH IIHRDL+ +NI + +K+ DFG L TVK + Q
Sbjct: 142 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG---LATVKSRWSGSHQFEQLS 195
Query: 316 TSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE-----VPKAYA 367
S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ + V + Y
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 368 ARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 417
+ P + +K L+ EC +K +RP F QI+ +E + S+
Sbjct: 256 S---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 302
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 142/290 (48%), Gaps = 35/290 (12%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 4 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 54
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 55 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 113
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ----D 315
A+GM+YLH IIHRDL+ +NI + +K+ DFG L TVK + Q
Sbjct: 114 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG---LATVKSRWSGSHQFEQLS 167
Query: 316 TSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE-----VPKAYA 367
S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ + V + Y
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 368 ARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 417
+ P + +K L+ EC +K +RP F QI+ +E + S+
Sbjct: 228 S---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 126/249 (50%), Gaps = 28/249 (11%)
Query: 168 FILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
++ + + +VAVK + +S V AF E +++ ++H +V+ L AV P+ I
Sbjct: 199 WMATYNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYI 253
Query: 228 VTEYLPKGDLRAFLKR-KGALKP-STAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL 285
+TE++ KG L FLK +G+ +P + F+ IA GM ++ + IHRDL +NIL
Sbjct: 254 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANIL 310
Query: 286 RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQ 345
S K+ADFG+++ V P+ ++ APE + K DV+SF ++L
Sbjct: 311 VSASLVCKIADFGLAR---VGAKFPI-------KWTAPEAINFGSFTIKSDVWSFGILLM 360
Query: 346 EMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPT 402
E++ G P+ + EV +A R P P +LY ++ CW +P +RPT
Sbjct: 361 EIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELY-----NIMMRCWKNRPEERPT 415
Query: 403 FRQIITRLE 411
F I + L+
Sbjct: 416 FEYIQSVLD 424
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 127/267 (47%), Gaps = 36/267 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 70 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 126
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR +L K K + +++ I +GM YL + IHRDL NIL ++
Sbjct: 127 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 183
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ DFG++K+L ++ + ++ + APE ++ DV+SF ++L E+
Sbjct: 184 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
Query: 349 ----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
PP + H E+ K RP P ++Y ++
Sbjct: 244 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYM-----IMT 297
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSI 417
ECWN +RP+FR + R++ I + +
Sbjct: 298 ECWNNNVNQRPSFRDLALRVDQIRDQM 324
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 18/263 (6%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VAV+ + + ++ + FR E+ +++
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKV 69
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + +V EY G++ +L G +K A I + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF 326
H+ I+HRDL+ N+L D N+K+ADFG S T C S Y APE+F
Sbjct: 130 HQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELF 184
Query: 327 KNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPPFKAPAKLYARG 384
+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R PF +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF-----YMSTD 239
Query: 385 LKELIEECWNEKPAKRPTFRQII 407
+ L+++ P+KR T QI+
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIM 262
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 136/277 (49%), Gaps = 21/277 (7%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEA 62
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 63 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 120
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+ + YL + +HRD+ N+L + +K+ DFG+S+ + + +
Sbjct: 121 STALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYAARQRPPF--KA 376
++APE + + DV+ F + + E ++ G PF +N+V +R P
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 237
Query: 377 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 238 PPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 142/290 (48%), Gaps = 35/290 (12%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 4 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 54
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T + + IVT++ L L + + + A
Sbjct: 55 VGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 113
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ----D 315
A+GM+YLH IIHRDL+ +NI + +K+ DFG L TVK + Q
Sbjct: 114 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG---LATVKSRWSGSHQFEQLS 167
Query: 316 TSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE-----VPKAYA 367
S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ + V + Y
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 368 ARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 417
+ P + +K L+ EC +K +RP F QI+ +E + S+
Sbjct: 228 S---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 142/290 (48%), Gaps = 35/290 (12%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 31 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 81
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 82 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 140
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ----D 315
A+GM+YLH IIHRDL+ +NI + +K+ DFG L TVK + Q
Sbjct: 141 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG---LATVKSRWSGSHQFEQLS 194
Query: 316 TSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE-----VPKAYA 367
S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ + V + Y
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 254
Query: 368 ARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 417
+ P + +K L+ EC +K +RP F QI+ +E + S+
Sbjct: 255 S---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 301
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 18/263 (6%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VAVK + + ++ + FR E+ +++
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKV 69
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + +V EY G++ +L G +K A I + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF 326
H+ I+HRDL+ N+L D N+K+ADFG S T C + Y APE+F
Sbjct: 130 HQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFC--GAPPYAAPELF 184
Query: 327 KNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPPFKAPAKLYARG 384
+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R PF +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF-----YMSTD 239
Query: 385 LKELIEECWNEKPAKRPTFRQII 407
+ L+++ P+KR T QI+
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIM 262
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 36/267 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 39 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR +L K K + +++ I +GM YL + IHRDL NIL ++
Sbjct: 96 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 152
Query: 292 LKVADFGVSKLLTVKED--RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ DFG++K+L ++ + ++ + APE ++ DV+SF ++L E+
Sbjct: 153 VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
Query: 349 ----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
PP + H E+ K RP P ++Y ++
Sbjct: 213 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYM-----IMT 266
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSI 417
ECWN +RP+FR + R++ I +++
Sbjct: 267 ECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 136/277 (49%), Gaps = 21/277 (7%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEA 442
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 443 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 500
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+ + YL + +HRD+ N+L + +K+ DFG+S+ + + +
Sbjct: 501 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYAARQRPPF--KA 376
++APE + + DV+ F + + E ++ G PF +N+V +R P
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 617
Query: 377 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 618 PPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 18/263 (6%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VA+K + + ++ + FR E+ +++
Sbjct: 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKI 70
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + ++ EY G++ +L G +K A I + Y
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYC 130
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF 326
H+ + I+HRDL+ N+L D N+K+ADFG S TV C + Y APE+F
Sbjct: 131 HQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC--GAPPYAAPELF 185
Query: 327 KNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPPFKAPAKLYARG 384
+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R PF +
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF-----YMSTD 240
Query: 385 LKELIEECWNEKPAKRPTFRQII 407
+ L++ P KR T QI+
Sbjct: 241 CENLLKRFLVLNPIKRGTLEQIM 263
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 119/252 (47%), Gaps = 21/252 (8%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVT 229
++VAVK L ++I+ D + F E A +++ HP+V + +G +S M++
Sbjct: 52 VKVAVKMLKADIIASSD-IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVIL 110
Query: 230 EYLPKGDLRAFL--KRKGA----LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSN 283
++ GDL AFL R G L T VRF +DIA GM YL IHRDL N
Sbjct: 111 PFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARN 167
Query: 284 ILRDDSGNLKVADFGVS-KLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 342
+ + + VADFG+S K+ + R +++A E + Y DV++F +
Sbjct: 168 CMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGV 227
Query: 343 ILQE-MIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
+ E M G P+ + E+ R K P + + +L+ +CW+ P +RP
Sbjct: 228 TMWEIMTRGQTPYAGIENAEIYNYLIGGNR--LKQPPECMEE-VYDLMYQCWSADPKQRP 284
Query: 402 TFRQIITRLESI 413
+F + LE+I
Sbjct: 285 SFTCLRMELENI 296
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 18/263 (6%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VAV+ + + ++ + FR E+ +++
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKV 69
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + +V EY G++ +L G +K A I + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF 326
H+ I+HRDL+ N+L D N+K+ADFG S T C S Y APE+F
Sbjct: 130 HQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC--GSPPYAAPELF 184
Query: 327 KNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPPFKAPAKLYARG 384
+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R PF +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF-----YMSTD 239
Query: 385 LKELIEECWNEKPAKRPTFRQII 407
+ L+++ P+KR T QI+
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIM 262
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 136/277 (49%), Gaps = 21/277 (7%)
Query: 147 EYEIDPHELDFTNSV------EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
+YEI ++ + ++ +G ++ + VA+K + SD R + ++
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEA 442
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
L + Q HP++V+ +G +T++ P+ I+ E G+LR+FL+ RK +L ++ + +A +
Sbjct: 443 LTMRQ-FDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 500
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+ + YL + +HRD+ N+L + +K+ DFG+S+ + + +
Sbjct: 501 STALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQE-MIEGCPPFTMKHDNEVPKAYAARQRPPF--KA 376
++APE + + DV+ F + + E ++ G PF +N+V +R P
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 617
Query: 377 PAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
P LY+ L+ +CW P++RP F ++ +L +I
Sbjct: 618 PPTLYS-----LMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 128/267 (47%), Gaps = 36/267 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ E+L
Sbjct: 42 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFL 98
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR +L K K + +++ I +GM YL + IHRDL NIL ++
Sbjct: 99 PYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 155
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ DFG++K+L ++ + ++ + APE ++ DV+SF ++L E+
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
Query: 349 ----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
PP + H E+ K RP P ++Y ++
Sbjct: 216 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYM-----IMT 269
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSI 417
ECWN +RP+FR + R++ I +++
Sbjct: 270 ECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 29/283 (10%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 20 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 70
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 71 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 129
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ----D 315
ARGM+YLH IIHRDL+ +NI + +K+ DFG L T K + Q
Sbjct: 130 ARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFG---LATEKSRWSGSHQFEQLS 183
Query: 316 TSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFT--MKHDNEVPKAYAARQ 370
S ++APEV + ++ Y + DV++F ++L E++ G P++ D +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
P + +K L+ EC +K +RP+F +I+ +E +
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 113/230 (49%), Gaps = 13/230 (5%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VAVK + + ++ + FR E+ +++
Sbjct: 12 PHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKI 70
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + +V EY G++ +L G +K A I + Y
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 130
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF 326
H+ I+HRDL+ N+L D N+K+ADFG S TV C S Y APE+F
Sbjct: 131 HQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC--GSPPYAAPELF 185
Query: 327 KNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPPF 374
+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R PF
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF 235
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 29/283 (10%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 20 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 70
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T + + IVT++ L L + + + A
Sbjct: 71 VGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 129
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ----D 315
ARGM+YLH IIHRDL+ +NI + +K+ DFG L T K + Q
Sbjct: 130 ARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFG---LATEKSRWSGSHQFEQLS 183
Query: 316 TSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFT--MKHDNEVPKAYAARQ 370
S ++APEV + ++ Y + DV++F ++L E++ G P++ D +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
P + +K L+ EC +K +RP+F +I+ +E +
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 119/255 (46%), Gaps = 28/255 (10%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VAVK L + + D+ + F E LL ++H ++V+F G + P+++V EY+ G
Sbjct: 44 ILVAVKTLKD---ASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 100
Query: 236 DLRAFLKRKG-------------ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
DL FL+ G L S + A IA GM YL +HRDL
Sbjct: 101 DLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATR 157
Query: 283 NILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFA 341
N L ++ +K+ DFG+S+ + + R R++ PE ++ T+ DV+S
Sbjct: 158 NCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLG 217
Query: 342 LILQEMIE-GCPPFTMKHDNEVPKAYAARQ--RPPFKAPAKLYARGLKELIEECWNEKPA 398
++L E+ G P+ +NEV + + + P P ++Y EL+ CW +P
Sbjct: 218 VVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVY-----ELMLGCWQREPH 272
Query: 399 KRPTFRQIITRLESI 413
R + I T L+++
Sbjct: 273 MRKNIKGIHTLLQNL 287
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 132/268 (49%), Gaps = 29/268 (10%)
Query: 147 EYEIDPHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDEL 201
+YE D + + V + KGT+ + + +++A+K++ E D + +E+
Sbjct: 4 DYEYDEN----GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEI 56
Query: 202 ALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRK-GALKPS--TAVRFALD 258
AL + ++H N+VQ+LG+ +++ + I E +P G L A L+ K G LK + T +
Sbjct: 57 ALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ 116
Query: 259 IARGMNYLHENKPVPIIHRDLEPSNILRDD-SGNLKVADFGVSKLLTVKEDRPLTCQDT- 316
I G+ YLH+N+ I+HRD++ N+L + SG LK++DFG SK L C +T
Sbjct: 117 ILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN----PCTETF 169
Query: 317 --SCRYVAPEVFKN--EEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRP 372
+ +Y+APE+ Y D++S + EM G PPF + + +
Sbjct: 170 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKV 229
Query: 373 PFKAPAKLYARGLKELIEECWNEKPAKR 400
+ P + A K I +C+ P KR
Sbjct: 230 HPEIPESMSAEA-KAFILKCFEPDPDKR 256
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 140/281 (49%), Gaps = 40/281 (14%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 18 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIE-FLNEASVMKEF 75
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTA-------------VR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P+ A ++
Sbjct: 76 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPAMANNPVLAPPSLSKMIQ 132
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTC 313
A +IA GM YL+ NK +HRDL N + + +K+ DFG+++ + R
Sbjct: 133 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 189
Query: 314 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQ 370
R+++PE K+ + T DV+SF ++L E+ P+ + +V +
Sbjct: 190 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 249
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 411
P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 250 DKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 285
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 128/267 (47%), Gaps = 36/267 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 40 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 96
Query: 233 PKGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR +L K K + +++ I +GM YL + IHR+L NIL ++
Sbjct: 97 PYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRNLATRNILVENENR 153
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ DFG++K+L ++ + ++ + APE ++ DV+SF ++L E+
Sbjct: 154 VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
Query: 349 ----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
PP + H E+ K RP P ++Y ++
Sbjct: 214 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYM-----IMT 267
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSI 417
ECWN +RP+FR + R++ I +++
Sbjct: 268 ECWNNNVNQRPSFRDLALRVDQIRDNM 294
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 132/268 (49%), Gaps = 29/268 (10%)
Query: 147 EYEIDPHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDEL 201
+YE D + + V + KGT+ + + +++A+K++ E D + +E+
Sbjct: 18 DYEYDEN----GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEI 70
Query: 202 ALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRK-GALKPS--TAVRFALD 258
AL + ++H N+VQ+LG+ +++ + I E +P G L A L+ K G LK + T +
Sbjct: 71 ALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ 130
Query: 259 IARGMNYLHENKPVPIIHRDLEPSNILRDD-SGNLKVADFGVSKLLTVKEDRPLTCQDT- 316
I G+ YLH+N+ I+HRD++ N+L + SG LK++DFG SK L C +T
Sbjct: 131 ILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN----PCTETF 183
Query: 317 --SCRYVAPEVFKN--EEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRP 372
+ +Y+APE+ Y D++S + EM G PPF + + +
Sbjct: 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKV 243
Query: 373 PFKAPAKLYARGLKELIEECWNEKPAKR 400
+ P + A K I +C+ P KR
Sbjct: 244 HPEIPESMSAEA-KAFILKCFEPDPDKR 270
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 139/281 (49%), Gaps = 40/281 (14%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 22 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIE-FLNEASVMKEF 79
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 80 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 136
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTC 313
A +IA GM YL+ NK +HRDL N + + +K+ DFG+++ + R
Sbjct: 137 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 193
Query: 314 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQ 370
R+++PE K+ + T DV+SF ++L E+ P+ + +V +
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 253
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 411
P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 254 DKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 127/267 (47%), Gaps = 36/267 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVKKL S ++ +R F E+ +L+ ++H N+V++ G + + ++ EYL
Sbjct: 42 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
Query: 233 PKGDLRAFLKRKGA-LKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
P G LR +L+ + +++ I +GM YL + IHRDL NIL ++
Sbjct: 99 PYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENR 155
Query: 292 LKVADFGVSKLLTVKEDRPLTCQ--DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI- 348
+K+ DFG++K+L ++ + ++ + APE ++ DV+SF ++L E+
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
Query: 349 ----EGCPP--------------FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIE 390
PP + H E+ K RP P ++Y ++
Sbjct: 216 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYM-----IMT 269
Query: 391 ECWNEKPAKRPTFRQIITRLESINNSI 417
ECWN +RP+FR + R++ I +++
Sbjct: 270 ECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 24/246 (9%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 35 QSKFILALKVLFKTQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 86
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 87 VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 143
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEEYDTKVDVFSFA 341
L +G LK+ADFG S P + +DT C Y+ PE+ + +D KVD++S
Sbjct: 144 LLGSNGELKIADFGWSV------HAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 197
Query: 342 LILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
++ E + G PPF E Y R F P G ++LI ++R
Sbjct: 198 VLCYEFLVGMPPFEAHTYQET---YRRISRVEFTFP-DFVTEGARDLISRLLKHNASQRL 253
Query: 402 TFRQII 407
T +++
Sbjct: 254 TLAEVL 259
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 9/212 (4%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 73 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 132
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+G+ YL E I+HRD++PSNIL + G +K+ DFGVS L D +
Sbjct: 133 IKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRS 187
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKA---YAARQRPPFKA 376
Y++PE + Y + D++S L L EM G P + Y + PP K
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPP-KL 246
Query: 377 PAKLYARGLKELIEECWNEKPAKRPTFRQIIT 408
P+ +++ ++ + +C + PA+R +Q++
Sbjct: 247 PSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 278
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 47/266 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++TE+ G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 280 EPSNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRYVAPEVFKNEEY 331
NIL + +K+ DFG+++ + D PL +++APE + Y
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL-------KWMAPETIFDRVY 218
Query: 332 DTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKE 387
+ DV+SF ++L E+ G P+ +K D E + R R P ++Y +
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY-----Q 273
Query: 388 LIEECWNEKPAKRPTFRQIITRLESI 413
+ +CW+ +P++RPTF +++ L ++
Sbjct: 274 TMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 140/281 (49%), Gaps = 40/281 (14%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 28 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE-AASMRERIE-FLNEASVMKEF 85
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTA-------------VR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P+ A ++
Sbjct: 86 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPAMANNPVLAPPSLSKMIQ 142
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTC 313
A +IA GM YL+ NK +HRDL N + + +K+ DFG+++ + R
Sbjct: 143 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 314 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQ 370
R+++PE K+ + T DV+SF ++L E+ P+ + +V +
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 259
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 411
P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 260 DKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 47/266 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++TE+ G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 280 EPSNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRYVAPEVFKNEEY 331
NIL + +K+ DFG+++ + D PL +++APE + Y
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL-------KWMAPETIFDRVY 218
Query: 332 DTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKE 387
+ DV+SF ++L E+ G P+ +K D E + R R P ++Y L
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-- 276
Query: 388 LIEECWNEKPAKRPTFRQIITRLESI 413
+CW+ +P++RPTF +++ L ++
Sbjct: 277 ---DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 47/266 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++TE+ G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 280 EPSNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRYVAPEVFKNEEY 331
NIL + +K+ DFG+++ + D PL +++APE + Y
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL-------KWMAPETIFDRVY 218
Query: 332 DTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKE 387
+ DV+SF ++L E+ G P+ +K D E + R R P ++Y L
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-- 276
Query: 388 LIEECWNEKPAKRPTFRQIITRLESI 413
+CW+ +P++RPTF +++ L ++
Sbjct: 277 ---DCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 141/290 (48%), Gaps = 35/290 (12%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 24 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 74
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 75 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 133
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ----D 315
A+GM+YLH IIHRDL+ +NI + +K+ DFG L T K + Q
Sbjct: 134 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG---LATEKSRWSGSHQFEQLS 187
Query: 316 TSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE-----VPKAYA 367
S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ + V + Y
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 247
Query: 368 ARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 417
+ P + +K L+ EC +K +RP F QI+ +E + S+
Sbjct: 248 S---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 294
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 121/255 (47%), Gaps = 29/255 (11%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 236 DLRAFLKRK------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSN 283
+L +L+ K L + ++ +A+GM +L K IHRDL N
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRK---XIHRDLAARN 174
Query: 284 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD-TSCRYVAPEVFKNEEYDTKVDVFSFAL 342
IL + +K+ DFG+++ + D +++APE + Y + DV+SF +
Sbjct: 175 ILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 234
Query: 343 ILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPA 398
+L E+ G P+ +K D E + R R P ++Y L +CW+ +P+
Sbjct: 235 LLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTML-----DCWHGEPS 289
Query: 399 KRPTFRQIITRLESI 413
+RPTF +++ L ++
Sbjct: 290 QRPTFSELVEHLGNL 304
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 141/290 (48%), Gaps = 35/290 (12%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 4 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 54
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 55 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 113
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ----D 315
A+GM+YLH IIHRDL+ +NI + +K+ DFG L T K + Q
Sbjct: 114 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG---LATEKSRWSGSHQFEQLS 167
Query: 316 TSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE-----VPKAYA 367
S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ + V + Y
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 368 ARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 417
+ P + +K L+ EC +K +RP F QI+ +E + S+
Sbjct: 228 S---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 139/281 (49%), Gaps = 40/281 (14%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 15 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIE-FLNEASVMKEF 72
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 73 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 129
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTC 313
A +IA GM YL+ NK +HRDL N + + +K+ DFG+++ + R
Sbjct: 130 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 314 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQ 370
R+++PE K+ + T DV+SF ++L E+ P+ + +V +
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 246
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 411
P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 247 DKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 139/281 (49%), Gaps = 40/281 (14%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 50 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIE-FLNEASVMKEF 107
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 108 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 164
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTC 313
A +IA GM YL+ NK +HRDL N + + +K+ DFG+++ + R
Sbjct: 165 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 221
Query: 314 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAY--AARQ 370
R+++PE K+ + T DV+SF ++L E+ P+ + +V +
Sbjct: 222 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 281
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 411
P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 282 DKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 317
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 141/290 (48%), Gaps = 35/290 (12%)
Query: 144 EVPEYEIDPHELDFTNSVEITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDE 200
E+P+ +I T I G+F + W G VAVK L + +++AF++E
Sbjct: 32 EIPDGQI-------TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ-QLQAFKNE 82
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDI 259
+ +L+K RH N++ F+G T+ + IVT++ L L + + + A
Sbjct: 83 VGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 141
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ----D 315
A+GM+YLH IIHRDL+ +NI + +K+ DFG L T K + Q
Sbjct: 142 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG---LATEKSRWSGSHQFEQLS 195
Query: 316 TSCRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNE-----VPKAYA 367
S ++APEV + ++ Y + DV++F ++L E++ G P++ ++ + V + Y
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 368 ARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSI 417
+ P + +K L+ EC +K +RP F QI+ +E + S+
Sbjct: 256 S---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 302
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 139/281 (49%), Gaps = 40/281 (14%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 19 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE-AASMRERIE-FLNEASVMKEF 76
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 77 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 133
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTC 313
A +IA GM YL+ NK +HRDL N + + +K+ DFG+++ + R
Sbjct: 134 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 314 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQ 370
R+++PE K+ + T DV+SF ++L E+ P+ + +V +
Sbjct: 191 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 250
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 411
P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 251 DKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 286
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 139/281 (49%), Gaps = 40/281 (14%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 21 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE-AASMRERIE-FLNEASVMKEF 78
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 79 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 135
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTC 313
A +IA GM YL+ NK +HRDL N + + +K+ DFG+++ + R
Sbjct: 136 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 314 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQ 370
R+++PE K+ + T DV+SF ++L E+ P+ + +V +
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 252
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 411
P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 253 DKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 139/281 (49%), Gaps = 40/281 (14%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 22 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIE-FLNEASVMKEF 79
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 80 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 136
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTC 313
A +IA GM YL+ NK +HRDL N + + +K+ DFG+++ + R
Sbjct: 137 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 193
Query: 314 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQ 370
R+++PE K+ + T DV+SF ++L E+ P+ + +V +
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 253
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 411
P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 254 DKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 124/266 (46%), Gaps = 42/266 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAV--TQSSPMMIVTEYL 232
G VAVK L + + ++ E+ +L+ + H +++++ G ++ + +V EY+
Sbjct: 60 GEMVAVKALKAD--AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 233 PKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNL 292
P G LR +L R ++ + + FA I GM YLH IHRDL N+L D+ +
Sbjct: 118 PLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLV 173
Query: 293 KVADFGVSKLL-------TVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQ 345
K+ DFG++K + V+ED D+ + APE K ++ DV+SF + L
Sbjct: 174 KIGDFGLAKAVPEGHEXYRVRED-----GDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 228
Query: 346 EMIEGC-----PPFTMKHDNEVPKAY------------AARQRPPFKAPAKLYARGLKEL 388
E++ C PP + + R P K PA++Y L
Sbjct: 229 ELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVY-----HL 283
Query: 389 IEECWNEKPAKRPTFRQIITRLESIN 414
++ CW + + RPTF +I L++++
Sbjct: 284 MKNCWETEASFRPTFENLIPILKTVH 309
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 139/281 (49%), Gaps = 40/281 (14%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 21 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE-AASMRERIE-FLNEASVMKEF 78
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 79 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 135
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTC 313
A +IA GM YL+ NK +HRDL N + + +K+ DFG+++ + R
Sbjct: 136 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 314 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQ 370
R+++PE K+ + T DV+SF ++L E+ P+ + +V +
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 252
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 411
P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 253 DKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 19/231 (8%)
Query: 143 REVPEYEIDPHEL-DFTNSVEITKGTF---ILAFWRGIQ--VAVKKLGEEVISDDDRVRA 196
R+ P +D +L DF + + KG+F +LA +G + A+K L ++V+ DD V
Sbjct: 6 RKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVEC 65
Query: 197 FRDE---LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAV 253
E LALL K P + Q + V EY+ GDL +++ G K AV
Sbjct: 66 TMVEKRVLALLDK--PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAV 123
Query: 254 RFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSK--LLTVKEDRPL 311
+A +I+ G+ +LH+ II+RDL+ N++ D G++K+ADFG+ K ++ R
Sbjct: 124 FYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREF 180
Query: 312 TCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
+ Y+APE+ + Y VD +++ ++L EM+ G PPF + ++E+
Sbjct: 181 C---GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL 228
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 95/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
GD+ + L+R G A +A I YLH + +I+RDL+P N+L D G +KV
Sbjct: 126 GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
ADFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 ADFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 95/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
GD+ + L+R G A +A I YLH + +I+RDL+P N+L D G +KV
Sbjct: 126 GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
ADFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 ADFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 117/263 (44%), Gaps = 50/263 (19%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK L EE + D F+ E AL+ + +PN+V+ LG PM ++ EY+ GDL
Sbjct: 80 VAVKMLKEE--ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL 137
Query: 238 RAFLKRKGALKPSTAVRF---------------------------ALDIARGMNYLHENK 270
FL+ ++ P T A +A GM YL E K
Sbjct: 138 NEFLR---SMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK 194
Query: 271 PVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT-SCRYVAPEVFKNE 329
+HRDL N L ++ +K+ADFG+S+ + + D R++ PE
Sbjct: 195 ---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYN 251
Query: 330 EYDTKVDVFSFALILQEMIE-GCPP-FTMKHDNEVPKAYAARQ----RPPFKAPAKLYAR 383
Y T+ DV+++ ++L E+ G P + M H+ + Y R P P +LY
Sbjct: 252 RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVI---YYVRDGNILACPENCPLELY-- 306
Query: 384 GLKELIEECWNEKPAKRPTFRQI 406
L+ CW++ PA RP+F I
Sbjct: 307 ---NLMRLCWSKLPADRPSFCSI 326
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 123/262 (46%), Gaps = 18/262 (6%)
Query: 152 PHELDFTNSVEITKGTFI---LA--FWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
PH ++ I KG F LA G +VAVK + + ++ + FR E+ + +
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKV 69
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
+ HPN+V+ + + +V EY G++ +L G K A I + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYC 129
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF 326
H+ I+HRDL+ N+L D N+K+ADFG S T C + Y APE+F
Sbjct: 130 HQK---FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFC--GAPPYAAPELF 184
Query: 327 KNEEYDT-KVDVFSFALILQEMIEGCPPFTMKHDNEV-PKAYAARQRPPFKAPAKLYARG 384
+ ++YD +VDV+S +IL ++ G PF ++ E+ + + R PF +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF-----YXSTD 239
Query: 385 LKELIEECWNEKPAKRPTFRQI 406
+ L+++ P+KR T QI
Sbjct: 240 CENLLKKFLILNPSKRGTLEQI 261
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 13/213 (6%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 57 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 116
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+G+ YL E I+HRD++PSNIL + G +K+ DFGVS L + +
Sbjct: 117 IKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRS--- 171
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQEMIEG---CPPFTMKHDNEVPKAYAARQRPPFKA 376
Y++PE + Y + D++S L L EM G PP + + Y + PP K
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLD----YIVNEPPP-KL 226
Query: 377 PAKLYARGLKELIEECWNEKPAKRPTFRQIITR 409
P+ +++ ++ + +C + PA+R +Q++
Sbjct: 227 PSAVFSLEFQDFVNKCLIKNPAERADLKQLMVH 259
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 139/281 (49%), Gaps = 40/281 (14%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 28 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE-AASMRERIE-FLNEASVMKEF 85
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 86 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 142
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTC 313
A +IA GM YL+ NK +HRDL N + + +K+ DFG+++ + R
Sbjct: 143 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 314 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQ 370
R+++PE K+ + T DV+SF ++L E+ P+ + +V +
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 259
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 411
P P L+ EL+ CW P RP+F +II+ ++
Sbjct: 260 DKPDNCPDMLF-----ELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 121/255 (47%), Gaps = 29/255 (11%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 236 DLRAFLKRK------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSN 283
+L +L+ K L + ++ +A+GM +L K IHRDL N
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRK---XIHRDLAARN 174
Query: 284 ILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD-TSCRYVAPEVFKNEEYDTKVDVFSFAL 342
IL + +K+ DFG+++ + D +++APE + Y + DV+SF +
Sbjct: 175 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 234
Query: 343 ILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPA 398
+L E+ G P+ +K D E + R R P ++Y L +CW+ +P+
Sbjct: 235 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-----DCWHGEPS 289
Query: 399 KRPTFRQIITRLESI 413
+RPTF +++ L ++
Sbjct: 290 QRPTFSELVEHLGNL 304
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 138/281 (49%), Gaps = 40/281 (14%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 13 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE-AASMRERIE-FLNEASVMKEF 70
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 71 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 127
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTC 313
A +IA GM YL+ NK +HRDL N + + +K+ DFG+++ + R
Sbjct: 128 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 184
Query: 314 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQ 370
R+++PE K+ + T DV+SF ++L E+ P+ + +V +
Sbjct: 185 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 244
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 411
P P L EL+ CW P RP+F +II+ ++
Sbjct: 245 DKPDNCPDMLL-----ELMRMCWQYNPKMRPSFLEIISSIK 280
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 62 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 236 DLRAFLKRK--------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEP 281
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRK---XIHRDLAA 176
Query: 282 SNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD-TSCRYVAPEVFKNEEYDTKVDVFSF 340
NIL + +K+ DFG+++ + D +++APE + Y + DV+SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 341 ALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEK 396
++L E+ G P+ +K D E + R R P ++Y L +CW+ +
Sbjct: 237 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-----DCWHGE 291
Query: 397 PAKRPTFRQIITRLESI 413
P++RPTF +++ L ++
Sbjct: 292 PSQRPTFSELVEHLGNL 308
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 118/217 (54%), Gaps = 11/217 (5%)
Query: 162 EITKGTFILAF----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG 217
++ +GT+ + + +G VA+K++ + + A R E++LL+++ HPN+V +
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKELHHPNIVSLID 86
Query: 218 AVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHR 277
+ + +V E++ K + + K L+ S + + RG+ + H+++ I+HR
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHR 143
Query: 278 DLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF-KNEEYDTKVD 336
DL+P N+L + G LK+ADFG+++ + R T + + Y AP+V +++Y T VD
Sbjct: 144 DLKPQNLLINSDGALKLADFGLARAFGIPV-RSYTHEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 337 VFSFALILQEMIEGCPPF-TMKHDNEVPKAYAARQRP 372
++S I EMI G P F + D+++PK ++ P
Sbjct: 203 IWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 129/284 (45%), Gaps = 32/284 (11%)
Query: 143 REVPEYEIDPHELDFTNSVEITKGTFILAFWRGIQ-----VAVKKLGEEVISDDDRVRAF 197
+E P +I DF + KG+F F + A+K L ++V+ DD V
Sbjct: 5 KERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT 64
Query: 198 RDELALLQ-KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFA 256
E +L HP + + V EYL GDL ++ S A +A
Sbjct: 65 MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA 124
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+I G+ +LH I++RDL+ NIL D G++K+ADFG+ K + + + T
Sbjct: 125 AEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGT 181
Query: 317 SCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKA 376
Y+APE+ ++Y+ VD +SF ++L EM+ G PF + + E+ ++ R PF
Sbjct: 182 P-DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL--FHSIRMDNPF-- 236
Query: 377 PAKLYARGL----KELIEECWNEKPAKR----------PTFRQI 406
Y R L K+L+ + + +P KR P FR+I
Sbjct: 237 ----YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 118/217 (54%), Gaps = 11/217 (5%)
Query: 162 EITKGTFILAF----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG 217
++ +GT+ + + +G VA+K++ + + A R E++LL+++ HPN+V +
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKELHHPNIVSLID 86
Query: 218 AVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHR 277
+ + +V E++ K + + K L+ S + + RG+ + H+++ I+HR
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHR 143
Query: 278 DLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF-KNEEYDTKVD 336
DL+P N+L + G LK+ADFG+++ + R T + + Y AP+V +++Y T VD
Sbjct: 144 DLKPQNLLINSDGALKLADFGLARAFGIPV-RSYTHEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 337 VFSFALILQEMIEGCPPF-TMKHDNEVPKAYAARQRP 372
++S I EMI G P F + D+++PK ++ P
Sbjct: 203 IWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 123/265 (46%), Gaps = 46/265 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 61 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 236 DLRAFLKRK---------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLE 280
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 119 NLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLA 175
Query: 281 PSNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRYVAPEVFKNEEYD 332
NIL + +K+ DFG+++ + D PL +++APE + Y
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL-------KWMAPETIFDRVYT 228
Query: 333 TKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKEL 388
+ DV+SF ++L E+ G P+ +K D E + R R P ++Y L
Sbjct: 229 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML--- 285
Query: 389 IEECWNEKPAKRPTFRQIITRLESI 413
+CW+ +P++RPTF +++ L ++
Sbjct: 286 --DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 116/234 (49%), Gaps = 11/234 (4%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA+K + ++V++ D E++ L+ +RHP++++ + +++V EY
Sbjct: 39 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 97
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
+L ++ ++ + A RF I + Y H +K I+HRDL+P N+L D+ N+K+
Sbjct: 98 NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKI 154
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFALILQEMIEGCPP 353
ADFG+S ++T +C S Y APEV + Y +VDV+S +IL M+ P
Sbjct: 155 ADFGLSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
Query: 354 FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
F D +P + + P K + G LI+ P R + +I+
Sbjct: 213 FD---DESIPVLFKNISNGVYTLP-KFLSPGAAGLIKRMLIVNPLNRISIHEIM 262
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 116/234 (49%), Gaps = 11/234 (4%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA+K + ++V++ D E++ L+ +RHP++++ + +++V EY
Sbjct: 33 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 91
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
+L ++ ++ + A RF I + Y H +K I+HRDL+P N+L D+ N+K+
Sbjct: 92 NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKI 148
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFALILQEMIEGCPP 353
ADFG+S ++T +C S Y APEV + Y +VDV+S +IL M+ P
Sbjct: 149 ADFGLSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
Query: 354 FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
F D +P + + P K + G LI+ P R + +I+
Sbjct: 207 FD---DESIPVLFKNISNGVYTLP-KFLSPGAAGLIKRMLIVNPLNRISIHEIM 256
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 116/234 (49%), Gaps = 11/234 (4%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA+K + ++V++ D E++ L+ +RHP++++ + +++V EY
Sbjct: 29 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 87
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
+L ++ ++ + A RF I + Y H +K I+HRDL+P N+L D+ N+K+
Sbjct: 88 NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKI 144
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFALILQEMIEGCPP 353
ADFG+S ++T +C S Y APEV + Y +VDV+S +IL M+ P
Sbjct: 145 ADFGLSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
Query: 354 FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
F D +P + + P K + G LI+ P R + +I+
Sbjct: 203 FD---DESIPVLFKNISNGVYTLP-KFLSPGAAGLIKRMLIVNPLNRISIHEIM 252
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 116/234 (49%), Gaps = 11/234 (4%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA+K + ++V++ D E++ L+ +RHP++++ + +++V EY
Sbjct: 38 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 96
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
+L ++ ++ + A RF I + Y H +K I+HRDL+P N+L D+ N+K+
Sbjct: 97 NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKI 153
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFALILQEMIEGCPP 353
ADFG+S ++T +C S Y APEV + Y +VDV+S +IL M+ P
Sbjct: 154 ADFGLSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
Query: 354 FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
F D +P + + P K + G LI+ P R + +I+
Sbjct: 212 FD---DESIPVLFKNISNGVYTLP-KFLSPGAAGLIKRMLIVNPLNRISIHEIM 261
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 124/266 (46%), Gaps = 47/266 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 280 EPSNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRYVAPEVFKNEEY 331
NIL + +K+ DFG+++ + D PL +++APE + Y
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL-------KWMAPETIFDRVY 218
Query: 332 DTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKE 387
+ DV+SF ++L E+ G P+ +K D E + R R P ++Y +
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY-----Q 273
Query: 388 LIEECWNEKPAKRPTFRQIITRLESI 413
+ +CW+ +P++RPTF +++ L ++
Sbjct: 274 TMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 47/266 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174
Query: 280 EPSNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRYVAPEVFKNEEY 331
NIL + +K+ DFG+++ + D PL +++APE + Y
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL-------KWMAPETIFDRVY 227
Query: 332 DTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKE 387
+ DV+SF ++L E+ G P+ +K D E + R R P ++Y L
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-- 285
Query: 388 LIEECWNEKPAKRPTFRQIITRLESI 413
+CW+ +P++RPTF +++ L ++
Sbjct: 286 ---DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 47/266 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 97 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 211
Query: 280 EPSNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRYVAPEVFKNEEY 331
NIL + +K+ DFG+++ + D PL +++APE + Y
Sbjct: 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL-------KWMAPETIFDRVY 264
Query: 332 DTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKE 387
+ DV+SF ++L E+ G P+ +K D E + R R P ++Y L
Sbjct: 265 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-- 322
Query: 388 LIEECWNEKPAKRPTFRQIITRLESI 413
+CW+ +P++RPTF +++ L ++
Sbjct: 323 ---DCWHGEPSQRPTFSELVEHLGNL 345
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 129/284 (45%), Gaps = 32/284 (11%)
Query: 143 REVPEYEIDPHELDFTNSVEITKGTFILAFWRGIQ-----VAVKKLGEEVISDDDRVRAF 197
+E P +I DF + KG+F F + A+K L ++V+ DD V
Sbjct: 6 KERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT 65
Query: 198 RDELALLQ-KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFA 256
E +L HP + + V EYL GDL ++ S A +A
Sbjct: 66 MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA 125
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+I G+ +LH I++RDL+ NIL D G++K+ADFG+ K + + + T
Sbjct: 126 AEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGT 182
Query: 317 SCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKA 376
Y+APE+ ++Y+ VD +SF ++L EM+ G PF + + E+ ++ R PF
Sbjct: 183 P-DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL--FHSIRMDNPF-- 237
Query: 377 PAKLYARGL----KELIEECWNEKPAKR----------PTFRQI 406
Y R L K+L+ + + +P KR P FR+I
Sbjct: 238 ----YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 277
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 47/266 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174
Query: 280 EPSNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRYVAPEVFKNEEY 331
NIL + +K+ DFG+++ + D PL +++APE + Y
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL-------KWMAPETIFDRVY 227
Query: 332 DTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKE 387
+ DV+SF ++L E+ G P+ +K D E + R R P ++Y L
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-- 285
Query: 388 LIEECWNEKPAKRPTFRQIITRLESI 413
+CW+ +P++RPTF +++ L ++
Sbjct: 286 ---DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 47/266 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 62 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 176
Query: 280 EPSNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRYVAPEVFKNEEY 331
NIL + +K+ DFG+++ + D PL +++APE + Y
Sbjct: 177 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL-------KWMAPETIFDRVY 229
Query: 332 DTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKE 387
+ DV+SF ++L E+ G P+ +K D E + R R P ++Y L
Sbjct: 230 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-- 287
Query: 388 LIEECWNEKPAKRPTFRQIITRLESI 413
+CW+ +P++RPTF +++ L ++
Sbjct: 288 ---DCWHGEPSQRPTFSELVEHLGNL 310
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 47/266 (17%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQ-SSPMMIVTEYLPKG 235
VAVK L E + R A EL +L I H NVV LGA T+ P+M++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 236 DLRAFLKRK----------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDL 279
+L +L+ K L + ++ +A+GM +L K IHRDL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174
Query: 280 EPSNILRDDSGNLKVADFGVSKLLTVKEDR--------PLTCQDTSCRYVAPEVFKNEEY 331
NIL + +K+ DFG+++ + D PL +++APE + Y
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL-------KWMAPETIFDRVY 227
Query: 332 DTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKE 387
+ DV+SF ++L E+ G P+ +K D E + R R P ++Y L
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-- 285
Query: 388 LIEECWNEKPAKRPTFRQIITRLESI 413
+CW+ +P++RPTF +++ L ++
Sbjct: 286 ---DCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 24/246 (9%)
Query: 165 KGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
+ FILA + ++K G E R E+ + +RHPN+++ G ++
Sbjct: 35 QSKFILALKVLFKTQLEKAGVE--------HQLRREVEIQSHLRHPNILRLYGYFHDATR 86
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
+ ++ EY P G + L++ + ++A ++Y H + +IHRD++P N+
Sbjct: 87 VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR---VIHRDIKPENL 143
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEEYDTKVDVFSFA 341
L +G LK+ADFG S P + + T C Y+ PE+ + +D KVD++S
Sbjct: 144 LLGSNGELKIADFGWSV------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 197
Query: 342 LILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
++ E + G PPF E Y R F P G ++LI ++R
Sbjct: 198 VLCYEFLVGMPPFEAHTYQET---YRRISRVEFTFP-DFVTEGARDLISRLLKHNASQRL 253
Query: 402 TFRQII 407
T +++
Sbjct: 254 TLAEVL 259
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 108/237 (45%), Gaps = 16/237 (6%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ + VAVK L +V+S + + F E+ + + H N+++ G V + PM +VTE P
Sbjct: 35 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAP 93
Query: 234 KGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNL 292
G L L K +G T R+A+ +A GM YL + IHRDL N+L +
Sbjct: 94 LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLV 150
Query: 293 KVADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFSFALILQEMIE- 349
K+ DFG+ + L +D + + + APE K + D + F + L EM
Sbjct: 151 KIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 210
Query: 350 GCPPFTMKHDNEVPKAY---AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTF 403
G P+ + +++ R P P +Y ++ +CW KP RPTF
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY-----NVMVQCWAHKPEDRPTF 262
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 131/281 (46%), Gaps = 25/281 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G + AVK + + + + E+ LL+++ HPN+++ +V E
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGN 291
G+L + + A R + G+ Y+H+NK I+HRDL+P N+L + N
Sbjct: 111 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDAN 167
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
+++ DFG+S + + + + Y+APEV YD K DV+S +IL ++ GC
Sbjct: 168 IRIIDFGLSTHFEAS--KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGC 224
Query: 352 PPFTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPTFR------ 404
PPF ++ ++ K + + F+ P K + K+LI + P+ R + R
Sbjct: 225 PPFNGANEYDILKK-VEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHE 283
Query: 405 --------QIITRLESINNSINHKRRWKVYLFLSLSVCLHL 437
QI + S++N+I + R+++ L+ + L++
Sbjct: 284 WIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYM 324
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 95/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G +KV
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
ADFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 ADFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 16/235 (6%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+ VAVK L +V+S + + F E+ + + H N+++ G V + PM +VTE P G
Sbjct: 47 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLG 105
Query: 236 DLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L L K +G T R+A+ +A GM YL + IHRDL N+L +K+
Sbjct: 106 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKI 162
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GC 351
DFG+ + L +D + + + APE K + D + F + L EM G
Sbjct: 163 GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 222
Query: 352 PPFTMKHDNEVPKAY---AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTF 403
P+ + +++ R P P +Y ++ +CW KP RPTF
Sbjct: 223 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY-----NVMVQCWAHKPEDRPTF 272
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 16/235 (6%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+ VAVK L +V+S + + F E+ + + H N+++ G V + PM +VTE P G
Sbjct: 41 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLG 99
Query: 236 DLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L L K +G T R+A+ +A GM YL + IHRDL N+L +K+
Sbjct: 100 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKI 156
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GC 351
DFG+ + L +D + + + APE K + D + F + L EM G
Sbjct: 157 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 216
Query: 352 PPFTMKHDNEVPKAY---AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTF 403
P+ + +++ R P P +Y ++ +CW KP RPTF
Sbjct: 217 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY-----NVMVQCWAHKPEDRPTF 266
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 131/281 (46%), Gaps = 25/281 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G + AVK + + + + E+ LL+++ HPN+++ +V E
Sbjct: 74 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 133
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGN 291
G+L + + A R + G+ Y+H+NK I+HRDL+P N+L + N
Sbjct: 134 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDAN 190
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
+++ DFG+S + + + + Y+APEV YD K DV+S +IL ++ GC
Sbjct: 191 IRIIDFGLSTHFEAS--KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGC 247
Query: 352 PPFTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPTFR------ 404
PPF ++ ++ K + + F+ P K + K+LI + P+ R + R
Sbjct: 248 PPFNGANEYDILKK-VEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHE 306
Query: 405 --------QIITRLESINNSINHKRRWKVYLFLSLSVCLHL 437
QI + S++N+I + R+++ L+ + L++
Sbjct: 307 WIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYM 347
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 108/237 (45%), Gaps = 16/237 (6%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ + VAVK L +V+S + + F E+ + + H N+++ G V + PM +VTE P
Sbjct: 35 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAP 93
Query: 234 KGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNL 292
G L L K +G T R+A+ +A GM YL + IHRDL N+L +
Sbjct: 94 LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLV 150
Query: 293 KVADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFSFALILQEMIE- 349
K+ DFG+ + L +D + + + APE K + D + F + L EM
Sbjct: 151 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 210
Query: 350 GCPPFTMKHDNEVPKAY---AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTF 403
G P+ + +++ R P P +Y ++ +CW KP RPTF
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY-----NVMVQCWAHKPEDRPTF 262
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 111/236 (47%), Gaps = 19/236 (8%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG---AVTQSSPM-MIVTEYLP 233
VAVK L ++ D FR E + HP +V A T + P+ IV EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVD 99
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLK 293
LR + +G + P A+ D + +N+ H+N IIHRD++P+NI+ + +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVK 156
Query: 294 VADFGVSKLLTVKEDRPLTCQDT-----SCRYVAPEVFKNEEYDTKVDVFSFALILQEMI 348
V DFG+++ + D + T + +Y++PE + + D + DV+S +L E++
Sbjct: 157 VMDFGIARAIA---DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213
Query: 349 EGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
G PPFT D+ V AY + P P GL ++ + AK P R
Sbjct: 214 TGEPPFT--GDSPVSVAYQHVREDPI--PPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 131/281 (46%), Gaps = 25/281 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G + AVK + + + + E+ LL+++ HPN+++ +V E
Sbjct: 75 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 134
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGN 291
G+L + + A R + G+ Y+H+NK I+HRDL+P N+L + N
Sbjct: 135 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDAN 191
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
+++ DFG+S + + + + Y+APEV YD K DV+S +IL ++ GC
Sbjct: 192 IRIIDFGLSTHFEAS--KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGC 248
Query: 352 PPFTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPTFR------ 404
PPF ++ ++ K + + F+ P K + K+LI + P+ R + R
Sbjct: 249 PPFNGANEYDILKK-VEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHE 307
Query: 405 --------QIITRLESINNSINHKRRWKVYLFLSLSVCLHL 437
QI + S++N+I + R+++ L+ + L++
Sbjct: 308 WIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYM 348
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 118/227 (51%), Gaps = 13/227 (5%)
Query: 186 EVISDDDRVRAFR---DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK 242
+VI D ++F+ D + + + H ++V+ LG SS + +VT+YLP G L ++
Sbjct: 48 KVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVR 106
Query: 243 R-KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSK 301
+ +GAL P + + + IA+GM YL E+ ++HR+L N+L ++VADFGV+
Sbjct: 107 QHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVAD 163
Query: 302 LLTVKEDRPLTCQ-DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHD 359
LL + + L + T +++A E +Y + DV+S+ + + E++ G P+
Sbjct: 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL 223
Query: 360 NEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
EVP +R A ++ + ++ +CW RPTF+++
Sbjct: 224 AEVPDLLEKGER---LAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 267
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 12/235 (5%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ AVK + + + D R E+ LL+K+ HPN+++ + SS IV E G+
Sbjct: 49 EYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGNLK 293
L + ++ A R + G+ Y+H++ I+HRDL+P NIL ++ ++K
Sbjct: 108 LFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIK 164
Query: 294 VADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPP 353
+ DFG+S +++ + + + Y+APEV + YD K DV+S +IL ++ G PP
Sbjct: 165 IIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
Query: 354 FTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPTFRQII 407
F K++ ++ K + F P + + K+LI + P+ R T Q +
Sbjct: 222 FYGKNEYDILKR-VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL 275
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 16/235 (6%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+ VAVK L +V+S + + F E+ + + H N+++ G V + PM +VTE P G
Sbjct: 41 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLG 99
Query: 236 DLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L L K +G T R+A+ +A GM YL + IHRDL N+L +K+
Sbjct: 100 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKI 156
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GC 351
DFG+ + L +D + + + APE K + D + F + L EM G
Sbjct: 157 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 216
Query: 352 PPFTMKHDNEVPKAY---AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTF 403
P+ + +++ R P P +Y ++ +CW KP RPTF
Sbjct: 217 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY-----NVMVQCWAHKPEDRPTF 266
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 10/161 (6%)
Query: 198 RDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFAL 257
+ E +L++++HP +V + A + ++ EYL G+L L+R+G TA +
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA 128
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 317
+I+ + +LH+ II+RDL+P NI+ + G++K+ DFG+ K + T T
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDGTVTHTF 181
Query: 318 C---RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFT 355
C Y+APE+ ++ VD +S ++ +M+ G PPFT
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALL-QKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
A++ + +E+++DD+ + + E + Q HP +V S + V EY+ GDL
Sbjct: 81 AMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 140
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADF 297
++R+ L A ++ +I+ +NYLHE II+RDL+ N+L D G++K+ D+
Sbjct: 141 MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDY 197
Query: 298 GVSKLLTVKEDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
G+ K + RP T C Y+APE+ + E+Y VD ++ +++ EM+ G PF
Sbjct: 198 GMCK----EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
Query: 355 TMKHDNEVP 363
+ ++ P
Sbjct: 254 DIVGSSDNP 262
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 19/236 (8%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG---AVTQSSPM-MIVTEYLP 233
VAVK L ++ D FR E + HP +V A T + P+ IV EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLK 293
LR + +G + P A+ D + +N+ H+N IIHRD++P+NIL + +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVK 156
Query: 294 VADFGVSKLLTVKEDRPLTCQDT-----SCRYVAPEVFKNEEYDTKVDVFSFALILQEMI 348
V DFG+++ + D + T + +Y++PE + + D + DV+S +L E++
Sbjct: 157 VVDFGIARAIA---DSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213
Query: 349 EGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
G PPFT D+ V AY + P P GL ++ + AK P R
Sbjct: 214 TGEPPFTG--DSPVSVAYQHVREDPI--PPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 108/237 (45%), Gaps = 16/237 (6%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLP 233
+ + VAVK L +V+S + + F E+ + + H N+++ G V + PM +VTE P
Sbjct: 35 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAP 93
Query: 234 KGDLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNL 292
G L L K +G T R+A+ +A GM YL + IHRDL N+L +
Sbjct: 94 LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLV 150
Query: 293 KVADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFSFALILQEMIE- 349
K+ DFG+ + L +D + + + APE K + D + F + L EM
Sbjct: 151 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 210
Query: 350 GCPPFTMKHDNEVPKAY---AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTF 403
G P+ + +++ R P P +Y ++ +CW KP RPTF
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY-----NVMVQCWAHKPEDRPTF 262
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 12/235 (5%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ AVK + + + D R E+ LL+K+ HPN+++ + SS IV E G+
Sbjct: 49 EYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGNLK 293
L + ++ A R + G+ Y+H++ I+HRDL+P NIL ++ ++K
Sbjct: 108 LFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIK 164
Query: 294 VADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPP 353
+ DFG+S +++ + + + Y+APEV + YD K DV+S +IL ++ G PP
Sbjct: 165 IIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
Query: 354 FTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPTFRQII 407
F K++ ++ K + F P + + K+LI + P+ R T Q +
Sbjct: 222 FYGKNEYDILKR-VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL 275
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 137/281 (48%), Gaps = 40/281 (14%)
Query: 158 TNSVEITKGTFILAF---WRGI-------QVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
T S E+ +G+F + + +G+ +VA+K + E S +R+ F +E +++++
Sbjct: 15 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE-AASMRERIE-FLNEASVMKEF 72
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP-------------STAVR 254
+VV+ LG V+Q P +++ E + +GDL+++L+ +L+P S ++
Sbjct: 73 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR---SLRPEMENNPVLAPPSLSKMIQ 129
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSK-LLTVKEDRPLTC 313
A +IA GM YL+ NK +HRDL N + +K+ DFG+++ + R
Sbjct: 130 MAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 314 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQ 370
R+++PE K+ + T DV+SF ++L E+ P+ + +V +
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 246
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLE 411
P P L EL+ CW P RP+F +II+ ++
Sbjct: 247 DKPDNCPDMLL-----ELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 118/227 (51%), Gaps = 13/227 (5%)
Query: 186 EVISDDDRVRAFR---DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK 242
+VI D ++F+ D + + + H ++V+ LG SS + +VT+YLP G L ++
Sbjct: 66 KVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVR 124
Query: 243 R-KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSK 301
+ +GAL P + + + IA+GM YL E+ ++HR+L N+L ++VADFGV+
Sbjct: 125 QHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVAD 181
Query: 302 LLTVKEDRPLTCQ-DTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHD 359
LL + + L + T +++A E +Y + DV+S+ + + E++ G P+
Sbjct: 182 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL 241
Query: 360 NEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
EVP +R A ++ + ++ +CW RPTF+++
Sbjct: 242 AEVPDLLEKGER---LAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 285
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 12/235 (5%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ AVK + + + D R E+ LL+K+ HPN+++ + SS IV E G+
Sbjct: 49 EYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGNLK 293
L + ++ A R + G+ Y+H++ I+HRDL+P NIL ++ ++K
Sbjct: 108 LFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIK 164
Query: 294 VADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPP 353
+ DFG+S +++ + + + Y+APEV + YD K DV+S +IL ++ G PP
Sbjct: 165 IIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
Query: 354 FTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPTFRQII 407
F K++ ++ K + F P + + K+LI + P+ R T Q +
Sbjct: 222 FYGKNEYDILKR-VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL 275
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 16/235 (6%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
+ VAVK L +V+S + + F E+ + + H N+++ G V + PM +VTE P G
Sbjct: 47 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLG 105
Query: 236 DLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L L K +G T R+A+ +A GM YL + IHRDL N+L +K+
Sbjct: 106 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKI 162
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSC--RYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GC 351
DFG+ + L +D + + + APE K + D + F + L EM G
Sbjct: 163 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 222
Query: 352 PPFTMKHDNEVPKAY---AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTF 403
P+ + +++ R P P +Y ++ +CW KP RPTF
Sbjct: 223 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY-----NVMVQCWAHKPEDRPTF 272
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 99/184 (53%), Gaps = 14/184 (7%)
Query: 189 SDDDR-VRAFR----DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR 243
SDD++ + F +E++LL+ + HPN+++ +VTE+ G+L +
Sbjct: 80 SDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN 139
Query: 244 KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG---NLKVADFGVS 300
+ A I G+ YLH++ I+HRD++P NIL ++ N+K+ DFG+S
Sbjct: 140 RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
Query: 301 KLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDN 360
+ +D L + + Y+APEV K ++Y+ K DV+S +I+ ++ G PPF ++D
Sbjct: 197 SFFS--KDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ 253
Query: 361 EVPK 364
++ K
Sbjct: 254 DIIK 257
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 13/233 (5%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG---AVTQSSPM-MIVTEYLP 233
VAVK L ++ D FR E + HP +V A T + P+ IV EY+
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 116
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLK 293
LR + +G + P A+ D + +N+ H+N IIHRD++P+NI+ + +K
Sbjct: 117 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVK 173
Query: 294 VADFGVSKLLTVKEDRPLTCQDT--SCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
V DFG+++ + + + +Y++PE + + D + DV+S +L E++ G
Sbjct: 174 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
Query: 352 PPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
PPFT D+ V AY + P P GL ++ + AK P R
Sbjct: 234 PPFT--GDSPVSVAYQHVREDPI--PPSARHEGLSADLDAVVLKALAKNPENR 282
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 121/240 (50%), Gaps = 16/240 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G Q +K++ +S +R + R E+A+L ++HPN+VQ+ + ++ + IV +Y
Sbjct: 49 GRQYVIKEINISRMSSKEREES-RREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG 107
Query: 235 GDL-RAFLKRKGAL-KPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNL 292
GDL + +KG L + + + + I + ++H+ K I+HRD++ NI G +
Sbjct: 108 GDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTV 164
Query: 293 KVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCP 352
++ DFG++++L + C T Y++PE+ +N+ Y+ K D+++ +L E+
Sbjct: 165 QLGDFGIARVLNSTVELARACIGTP-YYLSPEICENKPYNNKSDIWALGCVLYELC---- 219
Query: 353 PFTMKHDNEVP--KAYAARQRPPFKAPAKL-YARGLKELIEECWNEKPAKRPTFRQIITR 409
T+KH E K + P L Y+ L+ L+ + + P RP+ I+ +
Sbjct: 220 --TLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 128/261 (49%), Gaps = 20/261 (7%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + KG+F + G++VA+K + ++ + V+ ++E+ + +++HP
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKP---STAVRFALDIARGMNYLH 267
++++ S+ + +V E G++ +LK + +KP + A F I GM YLH
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLH 129
Query: 268 ENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFK 327
+ I+HRDL SN+L + N+K+ADFG++ L + ++ T T Y++PE+
Sbjct: 130 SHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTP-NYISPEIAT 185
Query: 328 NEEYDTKVDVFSFALILQEMIEGCPPF-TMKHDNEVPKAYAARQRPPFKAPAKLYARGLK 386
+ + DV+S + ++ G PPF T N + K A ++ P+ L K
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA----DYEMPSFLSIEA-K 240
Query: 387 ELIEECWNEKPAKRPTFRQII 407
+LI + PA R + ++
Sbjct: 241 DLIHQLLRRNPADRLSLSSVL 261
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 13/233 (5%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG---AVTQSSPM-MIVTEYLP 233
VAVK L ++ D FR E + HP +V A T + P+ IV EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLK 293
LR + +G + P A+ D + +N+ H+N IIHRD++P+NI+ + +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVK 156
Query: 294 VADFGVSKLLTVKEDRPLTCQDT--SCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
V DFG+++ + + + +Y++PE + + D + DV+S +L E++ G
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 352 PPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
PPFT D+ V AY + P P GL ++ + AK P R
Sbjct: 217 PPFT--GDSPVSVAYQHVREDPI--PPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 120/264 (45%), Gaps = 21/264 (7%)
Query: 148 YEIDPHELDFTNSVEITKGTF-ILAFWRGIQ----VAVKKLGEEVISDDDRVRAFRDELA 202
++ DP +L F++ EI G+F + F R ++ VA+KK+ +++ + E+
Sbjct: 9 FKDDPEKL-FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR 67
Query: 203 LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARG 262
LQK+RHPN +Q+ G + +V EY K L+ +G
Sbjct: 68 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQG 127
Query: 263 MNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVA 322
+ YLH + +IHRD++ NIL + G +K+ DFG + ++ P + ++A
Sbjct: 128 LAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA-----PANXFVGTPYWMA 179
Query: 323 PEV---FKNEEYDTKVDVFSFALILQEMIEGCPP-FTMKHDNEVPKAYAARQRPPFKAPA 378
PEV +YD KVDV+S + E+ E PP F M N + Y Q +
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM---NAMSALYHIAQNESPALQS 236
Query: 379 KLYARGLKELIEECWNEKPAKRPT 402
++ + ++ C + P RPT
Sbjct: 237 GHWSEYFRNFVDSCLQKIPQDRPT 260
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 11/234 (4%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G + AVK + + + + E+ LL+++ HPN+++ +V E
Sbjct: 57 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 116
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGN 291
G+L + + A R + G+ Y+H+NK I+HRDL+P N+L + N
Sbjct: 117 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDAN 173
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
+++ DFG+S + + + + + Y+APEV YD K DV+S +IL ++ GC
Sbjct: 174 IRIIDFGLSTHF--EASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGC 230
Query: 352 PPFTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPTFR 404
PPF ++ ++ K + + F+ P K + K+LI + P+ R + R
Sbjct: 231 PPFNGANEYDILKK-VEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISAR 283
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 11/189 (5%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALL-QKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
A+K + +E+++DD+ + + E + Q HP +V S + V EY+ GDL
Sbjct: 34 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 93
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADF 297
++R+ L A ++ +I+ +NYLHE II+RDL+ N+L D G++K+ D+
Sbjct: 94 MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDY 150
Query: 298 GVSKLLTVKEDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
G+ K + RP C Y+APE+ + E+Y VD ++ +++ EM+ G PF
Sbjct: 151 GMCK----EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
Query: 355 TMKHDNEVP 363
+ ++ P
Sbjct: 207 DIVGSSDNP 215
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 112/233 (48%), Gaps = 12/233 (5%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G+ VA+KK+ + D E+ LL+++ HPNV+++ + + + + IV E
Sbjct: 57 GVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 116
Query: 235 GDL----RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG 290
GDL + F K+K + T ++ + + + ++H + ++HRD++P+N+ +G
Sbjct: 117 GDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATG 173
Query: 291 NLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEG 350
+K+ D G+ + + K + T Y++PE Y+ K D++S +L EM
Sbjct: 174 VVKLGDLGLGRFFSSKTTAAHSLVGTP-YYMSPERIHENGYNFKSDIWSLGCLLYEMAAL 232
Query: 351 CPPFTMKHDN--EVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRP 401
PF N + K PP P+ Y+ L++L+ C N P KRP
Sbjct: 233 QSPFYGDKMNLYSLCKKIEQCDYPPL--PSDHYSEELRQLVNMCINPDPEKRP 283
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 3/179 (1%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I+VA+K + ++ ++ F E+ ++ H N+V + + +V EY+
Sbjct: 37 IKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGP 96
Query: 236 DLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVA 295
L +++ G L TA+ F I G+ + H+ + I+HRD++P NIL D + LK+
Sbjct: 97 TLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIF 153
Query: 296 DFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG++K L+ + +Y +PE K E D D++S ++L EM+ G PPF
Sbjct: 154 DFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF 212
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 30/231 (12%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--------RKGALKPST 251
E+ + + HPN+V + + + +V + L G + +K + G L ST
Sbjct: 58 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 117
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL 311
++ G+ YLH+N IHRD++ NIL + G++++ADFGVS L D
Sbjct: 118 IATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 174
Query: 312 -----TCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMIEGCPPF---------TM 356
T T C ++APEV + YD K D++SF + E+ G P+ +
Sbjct: 175 NKVRKTFVGTPC-WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML 233
Query: 357 KHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
N+ P Q K K Y + +++I C + P KRPT +++
Sbjct: 234 TLQNDPPSLETGVQD---KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 13/233 (5%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG---AVTQSSPM-MIVTEYLP 233
VAVK L ++ D FR E + HP +V A T + P+ IV EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLK 293
LR + +G + P A+ D + +N+ H+N IIHRD++P+NI+ + +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVK 156
Query: 294 VADFGVSKLLTVKEDRPLTCQDT--SCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
V DFG+++ + + + +Y++PE + + D + DV+S +L E++ G
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 352 PPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
PPFT D+ V AY + P P GL ++ + AK P R
Sbjct: 217 PPFT--GDSPVSVAYQHVREDPI--PPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 11/189 (5%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALL-QKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
A+K + +E+++DD+ + + E + Q HP +V S + V EY+ GDL
Sbjct: 49 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 108
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADF 297
++R+ L A ++ +I+ +NYLHE II+RDL+ N+L D G++K+ D+
Sbjct: 109 MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDY 165
Query: 298 GVSKLLTVKEDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
G+ K + RP C Y+APE+ + E+Y VD ++ +++ EM+ G PF
Sbjct: 166 GMCK----EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
Query: 355 TMKHDNEVP 363
+ ++ P
Sbjct: 222 DIVGSSDNP 230
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 30/231 (12%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK--------RKGALKPST 251
E+ + + HPN+V + + + +V + L G + +K + G L ST
Sbjct: 63 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 122
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL 311
++ G+ YLH+N IHRD++ NIL + G++++ADFGVS L D
Sbjct: 123 IATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 179
Query: 312 -----TCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMIEGCPPF---------TM 356
T T C ++APEV + YD K D++SF + E+ G P+ +
Sbjct: 180 NKVRKTFVGTPC-WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML 238
Query: 357 KHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
N+ P Q K K Y + +++I C + P KRPT +++
Sbjct: 239 TLQNDPPSLETGVQD---KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 6/209 (2%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALD 258
E++++Q+ P+VV++ G+ +++ + IV EY G + ++ R L
Sbjct: 74 EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQS 133
Query: 259 IARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC 318
+G+ YLH + IHRD++ NIL + G+ K+ADFGV+ LT + T
Sbjct: 134 TLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPF 190
Query: 319 RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPA 378
++APEV + Y+ D++S + EM EG PP+ H P F+ P
Sbjct: 191 -WMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKP- 248
Query: 379 KLYARGLKELIEECWNEKPAKRPTFRQII 407
+L++ + +++C + P +R T Q++
Sbjct: 249 ELWSDNFTDFVKQCLVKSPEQRATATQLL 277
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 120/264 (45%), Gaps = 21/264 (7%)
Query: 148 YEIDPHELDFTNSVEITKGTF-ILAFWRGIQ----VAVKKLGEEVISDDDRVRAFRDELA 202
++ DP +L F++ EI G+F + F R ++ VA+KK+ +++ + E+
Sbjct: 48 FKDDPEKL-FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR 106
Query: 203 LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARG 262
LQK+RHPN +Q+ G + +V EY K L+ +G
Sbjct: 107 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQG 166
Query: 263 MNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVA 322
+ YLH + +IHRD++ NIL + G +K+ DFG + ++ P + ++A
Sbjct: 167 LAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA-----PANXFVGTPYWMA 218
Query: 323 PEV---FKNEEYDTKVDVFSFALILQEMIEGCPP-FTMKHDNEVPKAYAARQRPPFKAPA 378
PEV +YD KVDV+S + E+ E PP F M N + Y Q +
Sbjct: 219 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM---NAMSALYHIAQNESPALQS 275
Query: 379 KLYARGLKELIEECWNEKPAKRPT 402
++ + ++ C + P RPT
Sbjct: 276 GHWSEYFRNFVDSCLQKIPQDRPT 299
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 14/232 (6%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
+A+K L + + + R E+ + +RHPN+++ + ++ E+ P+G+L
Sbjct: 43 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 102
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADF 297
L++ G + F ++A ++Y HE K +IHRD++P N+L G LK+ADF
Sbjct: 103 YKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADF 159
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMK 357
G S R + + Y+ PE+ + + +D KVD++ ++ E + G PPF
Sbjct: 160 GWSVHAPSLRRRXMC---GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP 216
Query: 358 HDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
E + + PPF + G K+LI + P +R + ++
Sbjct: 217 SHTETHRRIVNVDLKFPPF------LSDGSKDLISKLLRYHPPQRLPLKGVM 262
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 11/189 (5%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALL-QKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
A+K + +E+++DD+ + + E + Q HP +V S + V EY+ GDL
Sbjct: 38 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 97
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADF 297
++R+ L A ++ +I+ +NYLHE II+RDL+ N+L D G++K+ D+
Sbjct: 98 MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDY 154
Query: 298 GVSKLLTVKEDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
G+ K + RP C Y+APE+ + E+Y VD ++ +++ EM+ G PF
Sbjct: 155 GMCK----EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
Query: 355 TMKHDNEVP 363
+ ++ P
Sbjct: 211 DIVGSSDNP 219
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 92/157 (58%), Gaps = 7/157 (4%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALD 258
E+++L++++H N+V+ + +++V E+L + DL+ L +G L+ TA F L
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 259 IARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC 318
+ G+ Y H+ + ++HRDL+P N+L + G LK+ADFG+++ + R T + +
Sbjct: 109 LLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPV-RKYTHEVVTL 164
Query: 319 RYVAPEVF-KNEEYDTKVDVFSFALILQEMIEGCPPF 354
Y AP+V +++Y T +D++S I EM+ G P F
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLF 201
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 42/266 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVK L + ++ E+ +L+ + H +++++ G + +V EY+
Sbjct: 43 GEMVAVKALKADC--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 233 PKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNL 292
P G LR +L R ++ + + FA I GM YLH IHR+L N+L D+ +
Sbjct: 101 PLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDRLV 156
Query: 293 KVADFGVSKLL-------TVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQ 345
K+ DFG++K + V+ED D+ + APE K ++ DV+SF + L
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVRED-----GDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 211
Query: 346 EMIEGC-----PPFTMKHDNEVPKAY------------AARQRPPFKAPAKLYARGLKEL 388
E++ C PP + + R P K P ++Y L
Sbjct: 212 ELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVY-----HL 266
Query: 389 IEECWNEKPAKRPTFRQIITRLESIN 414
++ CW + + RPTF +I L++++
Sbjct: 267 MKNCWETEASFRPTFENLIPILKTVH 292
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 14/232 (6%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
+A+K L + + + R E+ + +RHPN+++ + ++ E+ P+G+L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADF 297
L++ G + F ++A ++Y HE K +IHRD++P N+L G LK+ADF
Sbjct: 102 YKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADF 158
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMK 357
G S R + + Y+ PE+ + + +D KVD++ ++ E + G PPF
Sbjct: 159 GWSVHAPSLRRRXMC---GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP 215
Query: 358 HDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
E + + PPF + G K+LI + P +R + ++
Sbjct: 216 SHTETHRRIVNVDLKFPPF------LSDGSKDLISKLLRYHPPQRLPLKGVM 261
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 4/158 (2%)
Query: 198 RDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFAL 257
+ E +L++++HP +V + A + ++ EYL G+L L+R+G TA +
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA 128
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 317
+I+ + +LH+ II+RDL+P NI+ + G++K+ DFG+ K ++ + +
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHXFCGT 184
Query: 318 CRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFT 355
Y+APE+ ++ VD +S ++ +M+ G PPFT
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 14/232 (6%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
+A+K L + + + R E+ + +RHPN+++ + ++ E+ P+G+L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADF 297
L++ G + F ++A ++Y HE K +IHRD++P N+L G LK+ADF
Sbjct: 102 YKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADF 158
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMK 357
G S R + + Y+ PE+ + + +D KVD++ ++ E + G PPF
Sbjct: 159 GWSVHAPSLRRRXMC---GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP 215
Query: 358 HDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
E + + PPF + G K+LI + P +R + ++
Sbjct: 216 SHTETHRRIVNVDLKFPPF------LSDGSKDLISKLLRYHPPQRLPLKGVM 261
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 92/157 (58%), Gaps = 7/157 (4%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALD 258
E+++L++++H N+V+ + +++V E+L + DL+ L +G L+ TA F L
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 259 IARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC 318
+ G+ Y H+ + ++HRDL+P N+L + G LK+ADFG+++ + R T + +
Sbjct: 109 LLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPV-RKYTHEIVTL 164
Query: 319 RYVAPEVF-KNEEYDTKVDVFSFALILQEMIEGCPPF 354
Y AP+V +++Y T +D++S I EM+ G P F
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 92/157 (58%), Gaps = 7/157 (4%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFALD 258
E+++L++++H N+V+ + +++V E+L + DL+ L +G L+ TA F L
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 259 IARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC 318
+ G+ Y H+ + ++HRDL+P N+L + G LK+ADFG+++ + R T + +
Sbjct: 109 LLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPV-RKYTHEVVTL 164
Query: 319 RYVAPEVF-KNEEYDTKVDVFSFALILQEMIEGCPPF 354
Y AP+V +++Y T +D++S I EM+ G P F
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 18/237 (7%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+K + +E + + + + +E+A+L KI+HPN+V + ++ + + G+L
Sbjct: 46 VAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILR---DDSGNLKV 294
+ KG A R + + YLH+ + I+HRDL+P N+L D+ + +
Sbjct: 104 FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
+DFG+SK+ + P + T+C YVAPEV + Y VD +S +I ++ G
Sbjct: 161 SDFGLSKM-----EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 352 PPFTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPTFRQII 407
PPF ++D ++ + + F +P + K+ I + P KR T Q +
Sbjct: 216 PPFYDENDAKLFEQ-ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL 271
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 129/275 (46%), Gaps = 20/275 (7%)
Query: 150 IDPHELDFTNSV-EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIR 208
ID +L+F + E G W+G + VK L S + R F +E L+
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTR-KSRDFNEECPRLRIFS 65
Query: 209 HPNVVQFLGAVTQSSPM---MIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGM 263
HPNV+ LGA QS P ++T ++P G L L + S AV+FALD+ARGM
Sbjct: 66 HPNVLPVLGAC-QSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGM 124
Query: 264 NYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAP 323
+LH +P+ I L +++ D+ +++ + VK + + +VAP
Sbjct: 125 AFLHTLEPL-IPRHALNSRSVMIDEDMTARIS------MADVKFSFQSPGRMYAPAWVAP 177
Query: 324 EVFKNEEYDTK---VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKL 380
E + + DT D++SFA++L E++ PF + E+ A P P
Sbjct: 178 EALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPG-- 235
Query: 381 YARGLKELIEECWNEKPAKRPTFRQIITRLESINN 415
+ + +L++ C NE PAKRP F I+ LE + +
Sbjct: 236 ISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 14/215 (6%)
Query: 156 DFTNSVEITKGTF---ILAFWRGIQV--AVKKLGEEVI---SDDDRVRAFRDELALLQKI 207
DF I KG+F +LA + +V AVK L ++ I ++ + + R+ LL+ +
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERN--VLLKNV 96
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH 267
+HP +V + + + V +Y+ G+L L+R+ A +A +IA + YLH
Sbjct: 97 KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLH 156
Query: 268 ENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFK 327
+ I++RDL+P NIL D G++ + DFG+ K ++ + + + Y+APEV
Sbjct: 157 S---LNIVYRDLKPENILLDSQGHIVLTDFGLCKE-NIEHNSTTSTFCGTPEYLAPEVLH 212
Query: 328 NEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
+ YD VD + +L EM+ G PPF ++ E+
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 42/266 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEYL 232
G VAVK L + ++ E+ +L+ + H +++++ G + +V EY+
Sbjct: 43 GEMVAVKALKADC--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 233 PKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNL 292
P G LR +L R ++ + + FA I GM YLH IHR+L N+L D+ +
Sbjct: 101 PLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDRLV 156
Query: 293 KVADFGVSKLL-------TVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQ 345
K+ DFG++K + V+ED D+ + APE K ++ DV+SF + L
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVRED-----GDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 211
Query: 346 EMIEGC-----PPFTMKHDNEVPKAY------------AARQRPPFKAPAKLYARGLKEL 388
E++ C PP + + R P K P ++Y L
Sbjct: 212 ELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVY-----HL 266
Query: 389 IEECWNEKPAKRPTFRQIITRLESIN 414
++ CW + + RPTF +I L++++
Sbjct: 267 MKNCWETEASFRPTFENLIPILKTVH 292
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 16/188 (8%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+K + +E + + + + +E+A+L KI+HPN+V + ++ + + G+L
Sbjct: 46 VAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILR---DDSGNLKV 294
+ KG A R + + YLH+ + I+HRDL+P N+L D+ + +
Sbjct: 104 FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
+DFG+SK+ + P + T+C YVAPEV + Y VD +S +I ++ G
Sbjct: 161 SDFGLSKM-----EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 352 PPFTMKHD 359
PPF ++D
Sbjct: 216 PPFYDEND 223
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 16/191 (8%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+K + +E + + + + +E+A+L KI+HPN+V + ++ + + G+L
Sbjct: 46 VAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILR---DDSGNLKV 294
+ KG A R + + YLH+ + I+HRDL+P N+L D+ + +
Sbjct: 104 FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
+DFG+SK+ + P + T+C YVAPEV + Y VD +S +I ++ G
Sbjct: 161 SDFGLSKM-----EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 352 PPFTMKHDNEV 362
PPF ++D ++
Sbjct: 216 PPFYDENDAKL 226
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 125/280 (44%), Gaps = 25/280 (8%)
Query: 156 DFTNSVEITKGTFILAF----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+F+N + +G F + G VAVK+L EE + F+ E+ ++ H N
Sbjct: 39 NFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL--QFQTEVEMISMAVHRN 96
Query: 212 VVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPS----TAVRFALDIARGMNYLH 267
+++ G + ++V Y+ G + + L+ + +P R AL ARG+ YLH
Sbjct: 97 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 156
Query: 268 ENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFK 327
++ IIHRD++ +NIL D+ V DFG++KL+ K+ + ++APE
Sbjct: 157 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLS 216
Query: 328 NEEYDTKVDVFSFALILQEMIEGCPPFT---MKHDNEV-----PKAYAARQRPPFKAPAK 379
+ K DVF + ++L E+I G F + +D++V K ++
Sbjct: 217 TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVD 276
Query: 380 LYARGLKELIEE-------CWNEKPAKRPTFRQIITRLES 412
L E +E+ C P +RP +++ LE
Sbjct: 277 LQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 24/257 (9%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVTE 230
++VAVK + + S + F E A ++ HPNV++ LG + S M++
Sbjct: 63 LKVAVKTMKLDN-SSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILP 121
Query: 231 YLPKGDLRAFLKRK------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
++ GDL +L + T ++F +DIA GM YL +HRDL N
Sbjct: 122 FMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNC 178
Query: 285 LRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 343
+ D + VADFG+SK + + R +++A E + Y +K DV++F +
Sbjct: 179 MLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVT 238
Query: 344 LQEM-IEGCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 400
+ E+ G P+ ++E+ + R + P +LY E++ CW P R
Sbjct: 239 MWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELY-----EIMYSCWRTDPLDR 293
Query: 401 PTFRQIITRLESINNSI 417
PTF + +LE + S+
Sbjct: 294 PTFSVLRLQLEKLLESL 310
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 52 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 111
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 112 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 168
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K + + R T T Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 169 TDFGFAKRV---KGRTWTLCGTP-EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K + + R T T Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 184 TDFGFAKRV---KGRTWTLCGTP-EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 13/233 (5%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLG---AVTQSSPM-MIVTEYLP 233
VAVK L ++ D FR E + HP +V A T + P+ IV EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLK 293
LR + +G + P A+ D + +N+ H+N IIHRD++P+NI+ + +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVK 156
Query: 294 VADFGVSKLLTVKEDRPLTCQDT--SCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
V DFG+++ + + + +Y++PE + + D + DV+S +L E++ G
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 352 PPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFR 404
PPFT + V AY + P P GL ++ + AK P R
Sbjct: 217 PPFTGDSPDSV--AYQHVREDPI--PPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 30/258 (11%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK L E + + + F+ E LL ++H ++V+F G T+ P+++V EY+ GDL
Sbjct: 51 VAVKALKE---ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 107
Query: 238 RAFLKRK---------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
FL+ G L + A +A GM YL + +HRDL
Sbjct: 108 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATR 164
Query: 283 NILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFA 341
N L +K+ DFG+S+ + + R R++ PE ++ T+ DV+SF
Sbjct: 165 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 224
Query: 342 LILQEMIEGC--PPFTMKHDNEVPKAYAARQ-RPPFKAPAKLYARGLKELIEECWNEKPA 398
++L E+ P + + + + R+ P P ++YA ++ CW +P
Sbjct: 225 VVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYA-----IMRGCWQREPQ 279
Query: 399 KRPTFRQIITRLESINNS 416
+R + + + RL+++ +
Sbjct: 280 QRHSIKDVHARLQALAQA 297
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 184 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 59 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 118
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 119 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 175
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 176 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 184 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 17/196 (8%)
Query: 166 GTFILAFWRGIQVAVKKLGEEV-ISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + VAVKKL V I+ ++ + F E+ ++ K +H N+V+ LG +
Sbjct: 45 GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDD 104
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST---AVRFALDIARGMNYLHENKPVPIIHRDLEP 281
+ +V Y+P G L L P + + A A G+N+LHEN IHRD++
Sbjct: 105 LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKS 161
Query: 282 SNILRDDSGNLKVADFGVSK-----LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 336
+NIL D++ K++DFG+++ TV R + + Y+APE + E K D
Sbjct: 162 ANILLDEAFTAKISDFGLARASEKFAQTVMXSRIV----GTTAYMAPEALRG-EITPKSD 216
Query: 337 VFSFALILQEMIEGCP 352
++SF ++L E+I G P
Sbjct: 217 IYSFGVVLLEIITGLP 232
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 184 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 127 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 184 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 30/258 (11%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK L E + + + F+ E LL ++H ++V+F G T+ P+++V EY+ GDL
Sbjct: 45 VAVKALKE---ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 101
Query: 238 RAFLKRK---------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
FL+ G L + A +A GM YL + +HRDL
Sbjct: 102 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATR 158
Query: 283 NILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFA 341
N L +K+ DFG+S+ + + R R++ PE ++ T+ DV+SF
Sbjct: 159 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 218
Query: 342 LILQEMIE-GCPPFTMKHDNEVPKAYAARQ--RPPFKAPAKLYARGLKELIEECWNEKPA 398
++L E+ G P+ + E + P P ++YA ++ CW +P
Sbjct: 219 VVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYA-----IMRGCWQREPQ 273
Query: 399 KRPTFRQIITRLESINNS 416
+R + + + RL+++ +
Sbjct: 274 QRHSIKDVHARLQALAQA 291
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 184 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 146
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 147 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 203
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 204 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+P
Sbjct: 59 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 118
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 119 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 175
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 176 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 30/258 (11%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK L E + + + F+ E LL ++H ++V+F G T+ P+++V EY+ GDL
Sbjct: 74 VAVKALKE---ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 130
Query: 238 RAFLKRK---------------GALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
FL+ G L + A +A GM YL + +HRDL
Sbjct: 131 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATR 187
Query: 283 NILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFA 341
N L +K+ DFG+S+ + + R R++ PE ++ T+ DV+SF
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 247
Query: 342 LILQEMIE-GCPPFTMKHDNEVPKAYAARQ--RPPFKAPAKLYARGLKELIEECWNEKPA 398
++L E+ G P+ + E + P P ++YA ++ CW +P
Sbjct: 248 VVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYA-----IMRGCWQREPQ 302
Query: 399 KRPTFRQIITRLESINNS 416
+R + + + RL+++ +
Sbjct: 303 QRHSIKDVHARLQALAQA 320
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N++ D G +KV
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 129/299 (43%), Gaps = 25/299 (8%)
Query: 137 MHVKHAREVPEYEIDPHELDFTNSVEITKGTFILAF----WRGIQVAVKKLGEEVISDDD 192
+H+ + E+ +F N + +G F + G VAVK+L EE +
Sbjct: 12 VHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGE 71
Query: 193 RVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPS-- 250
F+ E+ ++ H N+++ G + ++V Y+ G + + L+ + +P
Sbjct: 72 L--QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLD 129
Query: 251 --TAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKED 308
R AL ARG+ YLH++ IIHRD++ +NIL D+ V DFG++KL+ K+
Sbjct: 130 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 189
Query: 309 RPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFT---MKHDNEV--- 362
++APE + K DVF + ++L E+I G F + +D++V
Sbjct: 190 HVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249
Query: 363 --PKAYAARQRPPFKAPAKLYARGLKELIEE-------CWNEKPAKRPTFRQIITRLES 412
K ++ L E +E+ C P +RP +++ LE
Sbjct: 250 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L + + DRVR + E +L + HP VV+ A + ++ ++L
Sbjct: 56 GHLYAMKVLKKATLKVRDRVRT-KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRG 114
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
GDL L ++ + ++A G+++LH + II+RDL+P NIL D+ G++K+
Sbjct: 115 GDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKL 171
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG+SK E + + T Y+APEV + + D +S+ +++ EM+ G PF
Sbjct: 172 TDFGLSKEAIDHEKKAYSFCGT-VEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
Query: 355 TMKHDNEV 362
K E
Sbjct: 231 QGKDRKET 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N++ D G +KV
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 184 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + + +E +LQ + P +V+ + +S + +V EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N++ D G +KV
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG++K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGLAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 17/196 (8%)
Query: 166 GTFILAFWRGIQVAVKKLGEEV-ISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + VAVKKL V I+ ++ + F E+ ++ K +H N+V+ LG +
Sbjct: 45 GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDD 104
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST---AVRFALDIARGMNYLHENKPVPIIHRDLEP 281
+ +V Y+P G L L P + + A A G+N+LHEN IHRD++
Sbjct: 105 LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKS 161
Query: 282 SNILRDDSGNLKVADFGVSK-----LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 336
+NIL D++ K++DFG+++ TV R + + Y+APE + E K D
Sbjct: 162 ANILLDEAFTAKISDFGLARASEKFAQTVMXXRIV----GTTAYMAPEALRG-EITPKSD 216
Query: 337 VFSFALILQEMIEGCP 352
++SF ++L E+I G P
Sbjct: 217 IYSFGVVLLEIITGLP 232
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N++ D G +KV
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E + Q + P +V+ + +S + +V EY P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G +KV
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKV 183
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
ADFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 184 ADFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 99/191 (51%), Gaps = 16/191 (8%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+K + ++ + + + + +E+A+L KI+HPN+V + ++ + + G+L
Sbjct: 46 VAIKCIAKKAL--EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILR---DDSGNLKV 294
+ KG A R + + YLH+ + I+HRDL+P N+L D+ + +
Sbjct: 104 FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSC---RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
+DFG+SK+ + P + T+C YVAPEV + Y VD +S +I ++ G
Sbjct: 161 SDFGLSKM-----EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 352 PPFTMKHDNEV 362
PPF ++D ++
Sbjct: 216 PPFYDENDAKL 226
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 114/233 (48%), Gaps = 9/233 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA++++ + + +E+ ++++ ++PN+V +L + + +V EYL
Sbjct: 45 GQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G L + + + + + +LH N+ +IHRD++ NIL G++K+
Sbjct: 102 GSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKL 157
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +T ++ + T T ++APEV + Y KVD++S ++ EMIEG PP+
Sbjct: 158 TDFGFCAQITPEQSKRSTMVGTP-YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
Query: 355 TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
++ A P + P KL A ++ + C + KR + ++++
Sbjct: 217 LNENPLRALYLIATNGTPELQNPEKLSAI-FRDFLNRCLDMDVEKRGSAKELL 268
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 126/264 (47%), Gaps = 29/264 (10%)
Query: 163 ITKGTFILAFWRGIQVAVKKLGEEVISD--DDRVRAFRDELALLQKI-RHPNVVQFLGAV 219
+ GT+ + +G V +L + D D + E+ +L+K H N+ + GA
Sbjct: 32 VGNGTYGQVY-KGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 220 TQSSP------MMIVTEYLPKGDLRAFLK--RKGALKPSTAVRFALDIARGMNYLHENKP 271
+ +P + +V E+ G + +K + LK +I RG+++LH++K
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK- 149
Query: 272 VPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT---SCRYVAPEVFKN 328
+IHRD++ N+L ++ +K+ DFGVS L DR + ++T + ++APEV
Sbjct: 150 --VIHRDIKGQNVLLTENAEVKLVDFGVSAQL----DRTVGRRNTFIGTPYWMAPEVIAC 203
Query: 329 EE-----YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYAR 383
+E YD K D++S + EM EG PP H + + + P + +K +++
Sbjct: 204 DENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH--PMRALFLIPRNPAPRLKSKKWSK 261
Query: 384 GLKELIEECWNEKPAKRPTFRQII 407
+ IE C + ++RP Q++
Sbjct: 262 KFQSFIESCLVKNHSQRPATEQLM 285
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 25/280 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G + AVK + + + + E+ LL+++ HPN+ + +V E
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTG 110
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGN 291
G+L + + A R + G+ Y H+NK I+HRDL+P N+L + N
Sbjct: 111 GELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK---IVHRDLKPENLLLESKSKDAN 167
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
+++ DFG+S + + + Y+APEV YD K DV+S +IL ++ GC
Sbjct: 168 IRIIDFGLSTHFEAS--KKXKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGC 224
Query: 352 PPFTMKHDNEVPKAYAARQRPPFKAPA-KLYARGLKELIEECWNEKPAKRPTFR------ 404
PPF ++ ++ K + + F+ P K + K+LI + P+ R + R
Sbjct: 225 PPFNGANEYDILKK-VEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHE 283
Query: 405 --------QIITRLESINNSINHKRRWKVYLFLSLSVCLH 436
QI + S++N+I + R+++ L+ + L+
Sbjct: 284 WIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLY 323
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 9/179 (5%)
Query: 178 VAVKK--LGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
VA+KK LG + D R E+ LLQ++ HPN++ L A S + +V +++ +
Sbjct: 38 VAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ET 96
Query: 236 DLRAFLKRKG-ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
DL +K L PS + L +G+ YLH++ I+HRDL+P+N+L D++G LK+
Sbjct: 97 DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKL 153
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCP 352
ADFG++K +R Q + Y APE +F Y VD+++ IL E++ P
Sbjct: 154 ADFGLAKSFG-SPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVP 211
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQ--SSPMMIVTEYLPKGDLRAFL----KRKGALKPSTAV 253
E+ LL++++HPN+V++ + ++ + IV EY GDL + + K + L +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 254 RFALDIARGMNYLH--ENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL 311
R + + H + ++HRDL+P+N+ D N+K+ DFG++++L ED
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK 174
Query: 312 TCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR 371
T Y++PE Y+ K D++S +L E+ PPFT E+ A R+
Sbjct: 175 EFVGTP-YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL--AGKIREG 231
Query: 372 PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
+ P + Y+ L E+I N K RP+ +I+
Sbjct: 232 KFRRIPYR-YSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 17/217 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRA-FLKRKGALKPSTAVRFALD 258
E+ +L HPN+V+ L A + + I+ E+ G + A L+ + L S
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 259 IARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT-- 316
+NYLH+NK IIHRDL+ NIL G++K+ADFGVS K R + +D+
Sbjct: 144 TLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRTIQRRDSFI 196
Query: 317 -SCRYVAPEVF-----KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQ 370
+ ++APEV K+ YD K DV+S + L EM E PP + V A +
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 256
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
P P++ ++ K+ +++C + R T Q++
Sbjct: 257 PPTLAQPSR-WSSNFKDFLKKCLEKNVDARWTTSQLL 292
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 45/250 (18%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+G+ YL E I+HRD++PSNIL + G +K+ DFGVS L D +
Sbjct: 114 IKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRS 168
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQEMIEG---CPP---------FTMKHDNEVPK--- 364
Y++PE + Y + D++S L L EM G PP F + + + +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 228
Query: 365 ----------AYAARQRPPF---------------KAPAKLYARGLKELIEECWNEKPAK 399
+Y RPP K P+ +++ ++ + +C + PA+
Sbjct: 229 RPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAE 288
Query: 400 RPTFRQIITR 409
R +Q++
Sbjct: 289 RADLKQLMVH 298
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 45/250 (18%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+G+ YL E I+HRD++PSNIL + G +K+ DFGVS L D +
Sbjct: 114 IKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRS 168
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQEMIEG---CPP---------FTMKHDNEVPK--- 364
Y++PE + Y + D++S L L EM G PP F + + + +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 228
Query: 365 ----------AYAARQRPPF---------------KAPAKLYARGLKELIEECWNEKPAK 399
+Y RPP K P+ +++ ++ + +C + PA+
Sbjct: 229 RPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAE 288
Query: 400 RPTFRQIITR 409
R +Q++
Sbjct: 289 RADLKQLMVH 298
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 17/217 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRA-FLKRKGALKPSTAVRFALD 258
E+ +L HPN+V+ L A + + I+ E+ G + A L+ + L S
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 259 IARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT-- 316
+NYLH+NK IIHRDL+ NIL G++K+ADFGVS K R + +D+
Sbjct: 144 TLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDSFI 196
Query: 317 -SCRYVAPEVF-----KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQ 370
+ ++APEV K+ YD K DV+S + L EM E PP + V A +
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 256
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
P P++ ++ K+ +++C + R T Q++
Sbjct: 257 PPTLAQPSR-WSSNFKDFLKKCLEKNVDARWTTSQLL 292
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N++ D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + + +E +LQ + P +V+ + +S + +V EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N++ D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG++K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGLAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 117/259 (45%), Gaps = 31/259 (11%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK L + ++ + F+ E LL ++H ++V+F G P+++V EY+ GDL
Sbjct: 48 VAVKALKDPTLAAR---KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDL 104
Query: 238 RAFLK----------------RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEP 281
FL+ KG L S + A IA GM YL +HRDL
Sbjct: 105 NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLAT 161
Query: 282 SNILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 340
N L + +K+ DFG+S+ + + R R++ PE ++ T+ DV+SF
Sbjct: 162 RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 221
Query: 341 ALILQEMIE-GCPPFTMKHDNEVPKAYAARQ--RPPFKAPAKLYARGLKELIEECWNEKP 397
+IL E+ G P+ + EV + + P P ++Y +++ CW +P
Sbjct: 222 GVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVY-----DVMLGCWQREP 276
Query: 398 AKRPTFRQIITRLESINNS 416
+R ++I L ++ +
Sbjct: 277 QQRLNIKEIYKILHALGKA 295
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 45/250 (18%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+G+ YL E I+HRD++PSNIL + G +K+ DFGVS L D +
Sbjct: 114 IKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRS 168
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQEMIEG---CPP---------FTMKHDNEVPK--- 364
Y++PE + Y + D++S L L EM G PP F + + + +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 228
Query: 365 ----------AYAARQRPPF---------------KAPAKLYARGLKELIEECWNEKPAK 399
+Y RPP K P+ +++ ++ + +C + PA+
Sbjct: 229 RPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAE 288
Query: 400 RPTFRQIITR 409
R +Q++
Sbjct: 289 RADLKQLMVH 298
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P + + + +S + +V EY P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N++ D G +KV
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 184 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P + + + +S + +V EY P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N++ D G +KV
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 184 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 45/250 (18%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+G+ YL E I+HRD++PSNIL + G +K+ DFGVS L D +
Sbjct: 114 IKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRS 168
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQEMIEG---CPP---------FTMKHDNEVPK--- 364
Y++PE + Y + D++S L L EM G PP F + + + +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 228
Query: 365 ----------AYAARQRPPF---------------KAPAKLYARGLKELIEECWNEKPAK 399
+Y RPP K P+ +++ ++ + +C + PA+
Sbjct: 229 RPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAE 288
Query: 400 RPTFRQIITR 409
R +Q++
Sbjct: 289 RADLKQLMVH 298
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 113/233 (48%), Gaps = 9/233 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA++++ + + +E+ ++++ ++PN+V +L + + +V EYL
Sbjct: 46 GQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 102
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G L + + + + + +LH N+ +IHR+++ NIL G++K+
Sbjct: 103 GSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQ---VIHRNIKSDNILLGMDGSVKL 158
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +T ++ + T T ++APEV + Y KVD++S ++ EMIEG PP+
Sbjct: 159 TDFGFCAQITPEQSKRSTMVGTP-YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
Query: 355 TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
++ A P + P KL A ++ + C KR + +++I
Sbjct: 218 LNENPLRALYLIATNGTPELQNPEKLSAI-FRDFLNRCLEMDVEKRGSAKELI 269
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P + + + +S + +V EY P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N++ D G +KV
Sbjct: 127 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 184 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 9/192 (4%)
Query: 166 GTFILAFWRGIQVAVKKLGEEV-ISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + VAVKKL V I+ ++ + F E+ ++ K +H N+V+ LG +
Sbjct: 39 GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDD 98
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST---AVRFALDIARGMNYLHENKPVPIIHRDLEP 281
+ +V Y+P G L L P + + A A G+N+LHEN IHRD++
Sbjct: 99 LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKS 155
Query: 282 SNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT-SCRYVAPEVFKNEEYDTKVDVFSF 340
+NIL D++ K++DFG+++ + + + Y+APE + E K D++SF
Sbjct: 156 ANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG-EITPKSDIYSF 214
Query: 341 ALILQEMIEGCP 352
++L E+I G P
Sbjct: 215 GVVLLEIITGLP 226
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 17/217 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRA-FLKRKGALKPSTAVRFALD 258
E+ +L HPN+V+ L A + + I+ E+ G + A L+ + L S
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 259 IARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT-- 316
+NYLH+NK IIHRDL+ NIL G++K+ADFGVS K R + +D
Sbjct: 144 TLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDXFI 196
Query: 317 -SCRYVAPEVF-----KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQ 370
+ ++APEV K+ YD K DV+S + L EM E PP + V A +
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 256
Query: 371 RPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
P P++ ++ K+ +++C + R T Q++
Sbjct: 257 PPTLAQPSR-WSSNFKDFLKKCLEKNVDARWTTSQLL 292
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 53 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 112
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D+ G ++V
Sbjct: 113 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQV 169
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 170 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 13/224 (5%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLR 238
A+K L + + DRVR + E +L ++ HP +V+ A + ++ ++L GDL
Sbjct: 56 AMKVLKKATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 114
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFG 298
L ++ + ++A +++LH + II+RDL+P NIL D+ G++K+ DFG
Sbjct: 115 TRLSKEVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFG 171
Query: 299 VSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKH 358
+SK E + + T Y+APEV + D +SF +++ EM+ G PF K
Sbjct: 172 LSKESIDHEKKAYSFCGT-VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230
Query: 359 DNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 400
E A P F +P + L+ + PA R
Sbjct: 231 RKETMTMILKAKLGMPQFLSPEA------QSLLRMLFKRNPANR 268
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 132/290 (45%), Gaps = 47/290 (16%)
Query: 166 GTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQKIRHPNVVQFLGA----VT 220
G W G VAVK + S D FR+ E+ +RH N++ F+ +
Sbjct: 22 GEVWRGLWHGESVAVK-----IFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRN 76
Query: 221 QSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH------ENKPVPI 274
S+ + ++T Y G L FL+R+ L+P A+R A+ A G+ +LH + KP I
Sbjct: 77 SSTQLWLITHYHEHGSLYDFLQRQ-TLEPHLALRLAVSAACGLAHLHVEIFGTQGKPA-I 134
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD---TSCRYVAPEVFKNE-- 329
HRD + N+L + +AD G++ + + D + + RY+APEV +
Sbjct: 135 AHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIR 194
Query: 330 ----EYDTKVDVFSFALILQEM-----IEGC-----PPF--TMKHD---NEVPKAYAARQ 370
E D+++F L+L E+ + G PPF + +D ++ K Q
Sbjct: 195 TDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDMKKVVCVDQ 254
Query: 371 RPPFKAPAKLYA----RGLKELIEECWNEKPAKRPTFRQIITRLESINNS 416
+ P P +L A GL +++ ECW P+ R T +I L+ I+NS
Sbjct: 255 QTP-TIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKISNS 303
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 30/252 (11%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + E S +R+ F +E ++++ +VV+ LG V++ P ++V E + GD
Sbjct: 46 RVAVKTVNESA-SLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 103
Query: 237 LRAFLKRKGALKPST-------------AVRFALDIARGMNYLHENKPVPIIHRDLEPSN 283
L+++L+ +L+P ++ A +IA GM YL+ K +HRDL N
Sbjct: 104 LKSYLR---SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARN 157
Query: 284 ILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 342
+ +K+ DFG+++ + R R++APE K+ + T D++SF +
Sbjct: 158 CMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 217
Query: 343 ILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAK 399
+L E+ P+ + +V K P P ++ +L+ CW P
Sbjct: 218 VLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV-----TDLMRMCWQFNPKM 272
Query: 400 RPTFRQIITRLE 411
RPTF +I+ L+
Sbjct: 273 RPTFLEIVNLLK 284
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 13/224 (5%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLR 238
A+K L + + DRVR + E +L ++ HP +V+ A + ++ ++L GDL
Sbjct: 57 AMKVLKKATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 115
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFG 298
L ++ + ++A +++LH + II+RDL+P NIL D+ G++K+ DFG
Sbjct: 116 TRLSKEVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFG 172
Query: 299 VSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKH 358
+SK E + + T Y+APEV + D +SF +++ EM+ G PF K
Sbjct: 173 LSKESIDHEKKAYSFCGT-VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 231
Query: 359 DNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 400
E A P F +P + L+ + PA R
Sbjct: 232 RKETMTMILKAKLGMPQFLSPEA------QSLLRMLFKRNPANR 269
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 8/182 (4%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLR 238
A+K + ++ + + VR EL ++Q + HP +V + M +V + L GDLR
Sbjct: 44 AMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLR 103
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFG 298
L++ K T F ++ ++YL + IIHRD++P NIL D+ G++ + DF
Sbjct: 104 YHLQQNVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFN 160
Query: 299 VSKLLTVKEDRPLTCQDTSCRYVAPEVF---KNEEYDTKVDVFSFALILQEMIEGCPPFT 355
++ +L + +T + Y+APE+F K Y VD +S + E++ G P+
Sbjct: 161 IAAMLP--RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218
Query: 356 MK 357
++
Sbjct: 219 IR 220
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 112/233 (48%), Gaps = 9/233 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA++++ + + +E+ ++++ ++PN+V +L + + +V EYL
Sbjct: 46 GQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 102
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G L + + + + + +LH N+ +IHRD++ NIL G++K+
Sbjct: 103 GSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKL 158
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +T ++ + T ++APEV + Y KVD++S ++ EMIEG PP+
Sbjct: 159 TDFGFCAQITPEQSKRSXMVGTP-YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
Query: 355 TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
++ A P + P KL A ++ + C KR + +++I
Sbjct: 218 LNENPLRALYLIATNGTPELQNPEKLSAI-FRDFLNRCLEMDVEKRGSAKELI 269
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 18/196 (9%)
Query: 175 GIQVAVK--KLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYL 232
G+ VA+K KL E + +R E++L+++++H N+V+ + + + +V E++
Sbjct: 30 GVYVALKEVKLDSEEGTPSTAIR----EISLMKELKHENIVRLYDVIHTENKLTLVFEFM 85
Query: 233 PKGDLRAFLKRKG------ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILR 286
DL+ ++ + L+ + F + +G+ + HENK I+HRDL+P N+L
Sbjct: 86 -DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLI 141
Query: 287 DDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF-KNEEYDTKVDVFSFALILQ 345
+ G LK+ DFG+++ + + + + + Y AP+V + Y T +D++S IL
Sbjct: 142 NKRGQLKLGDFGLARAFGIPVNT-FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILA 200
Query: 346 EMIEGCPPFTMKHDNE 361
EMI G P F +D E
Sbjct: 201 EMITGKPLFPGTNDEE 216
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 30/252 (11%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + E S +R+ F +E ++++ +VV+ LG V++ P ++V E + GD
Sbjct: 49 RVAVKTVNESA-SLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 237 LRAFLKRKGALKPST-------------AVRFALDIARGMNYLHENKPVPIIHRDLEPSN 283
L+++L+ +L+P ++ A +IA GM YL+ K +HRDL N
Sbjct: 107 LKSYLR---SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARN 160
Query: 284 ILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 342
+ +K+ DFG+++ + R R++APE K+ + T D++SF +
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 343 ILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAK 399
+L E+ P+ + +V K P P ++ +L+ CW P
Sbjct: 221 VLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV-----TDLMRMCWQFNPKM 275
Query: 400 RPTFRQIITRLE 411
RPTF +I+ L+
Sbjct: 276 RPTFLEIVNLLK 287
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 30/252 (11%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + E S +R+ F +E ++++ +VV+ LG V++ P ++V E + GD
Sbjct: 49 RVAVKTVNESA-SLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 237 LRAFLKRKGALKPST-------------AVRFALDIARGMNYLHENKPVPIIHRDLEPSN 283
L+++L+ +L+P ++ A +IA GM YL+ K +HRDL N
Sbjct: 107 LKSYLR---SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARN 160
Query: 284 ILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 342
+ +K+ DFG+++ + R R++APE K+ + T D++SF +
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 343 ILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAK 399
+L E+ P+ + +V K P P + + +L+ CW P
Sbjct: 221 VLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER-----VTDLMRMCWQFNPNM 275
Query: 400 RPTFRQIITRLE 411
RPTF +I+ L+
Sbjct: 276 RPTFLEIVNLLK 287
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 138
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 199 AMLAGELPWDQPSDS 213
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 13/224 (5%)
Query: 179 AVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLR 238
A+K L + + DRVR + E +L ++ HP +V+ A + ++ ++L GDL
Sbjct: 56 AMKVLKKATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 114
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFG 298
L ++ + ++A +++LH + II+RDL+P NIL D+ G++K+ DFG
Sbjct: 115 TRLSKEVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFG 171
Query: 299 VSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKH 358
+SK E + + T Y+APEV + D +SF +++ EM+ G PF K
Sbjct: 172 LSKESIDHEKKAYSFCGT-VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230
Query: 359 DNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 400
E A P F +P + L+ + PA R
Sbjct: 231 RKETMTMILKAKLGMPQFLSPEA------QSLLRMLFKRNPANR 268
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 196 AFRDEL----ALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 48 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 106
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKED--R 309
+ ++ GM YL E+ +HRDL N+L K++DFG+SK L E+ +
Sbjct: 107 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 163
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAA 368
T ++ APE ++ +K DV+SF +++ E G P+ +EV
Sbjct: 164 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 223
Query: 369 RQR--PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
+R P P ++Y +L+ CW RP F + RL +
Sbjct: 224 GERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRLRN 264
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 146
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 147 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 203
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 204 TDFGFAK--RVKGATWTLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 61 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 120
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 121 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 177
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 178 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 113/233 (48%), Gaps = 9/233 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA++++ + + +E+ ++++ ++PN+V +L + + +V EYL
Sbjct: 45 GQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G L + + + + + +LH N+ +IHRD++ NIL G++K+
Sbjct: 102 GSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKL 157
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +T ++ + T ++APEV + Y KVD++S ++ EMIEG PP+
Sbjct: 158 TDFGFCAQITPEQSKRSEMVGTP-YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
Query: 355 TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
++ A P + P KL A ++ + C + KR + ++++
Sbjct: 217 LNENPLRALYLIATNGTPELQNPEKLSAI-FRDFLNRCLDMDVEKRGSAKELL 268
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 138
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 199 AMLAGELPWDQPSDS 213
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 138
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 199 AMLAGELPWDQPSDS 213
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 126
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 184 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 130/259 (50%), Gaps = 21/259 (8%)
Query: 161 VEITKGTFILAFWRG------IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQ 214
+EI +G+F + +G ++VA +L + ++ +R R F++E L+ ++HPN+V+
Sbjct: 32 IEIGRGSFKTVY-KGLDTETTVEVAWCELQDRKLTKSERQR-FKEEAEXLKGLQHPNIVR 89
Query: 215 FL----GAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENK 270
F V +++VTE G L+ +LKR K + I +G+ +LH
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRT 149
Query: 271 PVPIIHRDLEPSNI-LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNE 329
P PIIHRDL+ NI + +G++K+ D G L T+K + + APE ++ E
Sbjct: 150 P-PIIHRDLKCDNIFITGPTGSVKIGDLG---LATLKRASFAKAVIGTPEFXAPEXYE-E 204
Query: 330 EYDTKVDVFSFALILQEMIEGCPPFT-MKHDNEVPKAYAARQRPPFKAPAKLYARGLKEL 388
+YD VDV++F E P++ ++ ++ + + +P + K+ +KE+
Sbjct: 205 KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPA--SFDKVAIPEVKEI 262
Query: 389 IEECWNEKPAKRPTFRQII 407
IE C + +R + + ++
Sbjct: 263 IEGCIRQNKDERYSIKDLL 281
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 30/252 (11%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + E S +R+ F +E ++++ +VV+ LG V++ P ++V E + GD
Sbjct: 49 RVAVKTVNESA-SLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 237 LRAFLKRKGALKPST-------------AVRFALDIARGMNYLHENKPVPIIHRDLEPSN 283
L+++L+ +L+P ++ A +IA GM YL+ K +HRDL N
Sbjct: 107 LKSYLR---SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARN 160
Query: 284 ILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 342
+ +K+ DFG+++ + R R++APE K+ + T D++SF +
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 343 ILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAK 399
+L E+ P+ + +V K P P ++ +L+ CW P
Sbjct: 221 VLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV-----TDLMRMCWQFNPKM 275
Query: 400 RPTFRQIITRLE 411
RPTF +I+ L+
Sbjct: 276 RPTFLEIVNLLK 287
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 196 AFRDEL----ALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 54 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 112
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKED--R 309
+ ++ GM YL E+ +HRDL N+L K++DFG+SK L E+ +
Sbjct: 113 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK 169
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAA 368
T ++ APE ++ +K DV+SF +++ E G P+ +EV
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 229
Query: 369 RQR--PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
+R P P ++Y +L+ CW RP F + RL +
Sbjct: 230 GERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRLRN 270
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 45/249 (18%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 175
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+G+ YL E I+HRD++PSNIL + G +K+ DFGVS L D +
Sbjct: 176 IKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRS 230
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQEMIEG---CPP---------FTMKHDNEVPK--- 364
Y++PE + Y + D++S L L EM G PP F + + + +
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 290
Query: 365 ----------AYAARQRPPF---------------KAPAKLYARGLKELIEECWNEKPAK 399
+Y RPP K P+ +++ ++ + +C + PA+
Sbjct: 291 RPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAE 350
Query: 400 RPTFRQIIT 408
R +Q++
Sbjct: 351 RADLKQLMV 359
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 196 AFRDEL----ALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 60 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 118
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKED--R 309
+ ++ GM YL E+ +HRDL N+L K++DFG+SK L E+ +
Sbjct: 119 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAA 368
T ++ APE ++ +K DV+SF +++ E G P+ +EV
Sbjct: 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 235
Query: 369 RQR--PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
+R P P ++Y +L+ CW RP F + RL +
Sbjct: 236 GERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRLRN 276
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 196 AFRDEL----ALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 50 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 108
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKED--R 309
+ ++ GM YL E+ +HRDL N+L K++DFG+SK L E+ +
Sbjct: 109 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 165
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAA 368
T ++ APE ++ +K DV+SF +++ E G P+ +EV
Sbjct: 166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 225
Query: 369 RQR--PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
+R P P ++Y +L+ CW RP F + RL +
Sbjct: 226 GERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRLRN 266
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 30/252 (11%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + E S +R+ F +E ++++ +VV+ LG V++ P ++V E + GD
Sbjct: 49 RVAVKTVNESA-SLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 237 LRAFLKRKGALKPST-------------AVRFALDIARGMNYLHENKPVPIIHRDLEPSN 283
L+++L+ +L+P ++ A +IA GM YL+ K +HRDL N
Sbjct: 107 LKSYLR---SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARN 160
Query: 284 ILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 342
+ +K+ DFG+++ + R R++APE K+ + T D++SF +
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 343 ILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAK 399
+L E+ P+ + +V K P P ++ +L+ CW P
Sbjct: 221 VLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV-----TDLMRMCWQFNPKM 275
Query: 400 RPTFRQIITRLE 411
RPTF +I+ L+
Sbjct: 276 RPTFLEIVNLLK 287
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 24/276 (8%)
Query: 154 ELDFTNSVEITKGTFILAFWRGIQVAVK--KLGEEVISDDDRVRAFRDELALLQKIRHPN 211
EL N + +G + + + I VA+K K G E ++ +R E ++ ++ +P
Sbjct: 17 ELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEMMR----EAQIMHQLDNPY 71
Query: 212 VVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFAL-DIARGMNYLHENK 270
+V+ +G V Q+ +M+V E G L FL K P + V L ++ GM YL E
Sbjct: 72 IVRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 271 PVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFK 327
+HRDL N+L + K++DFG+SK L +D T + ++ APE
Sbjct: 131 ---FVHRDLAARNVLLVNRHYAKISDFGLSKALGA-DDSYYTARSAGKWPLKWYAPECIN 186
Query: 328 NEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARG 384
++ ++ DV+S+ + + E + G P+ EV R P + P +LYA
Sbjct: 187 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYA-- 244
Query: 385 LKELIEECWNEKPAKRPTFRQIITRLESINNSINHK 420
L+ +CW K RP F + R+ + S+ K
Sbjct: 245 ---LMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 146
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 147 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 203
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 204 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 196 AFRDEL----ALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 54 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 112
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKED--R 309
+ ++ GM YL E+ +HRDL N+L K++DFG+SK L E+ +
Sbjct: 113 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 169
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAA 368
T ++ APE ++ +K DV+SF +++ E G P+ +EV
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 229
Query: 369 RQR--PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
+R P P ++Y +L+ CW RP F + RL +
Sbjct: 230 GERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRLRN 270
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 138
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 199 AMLAGELPWDQPSDS 213
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 23 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 139
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 200 AMLAGELPWDQPSDS 214
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 30/252 (11%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + E S +R+ F +E ++++ +VV+ LG V++ P ++V E + GD
Sbjct: 48 RVAVKTVNESA-SLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 105
Query: 237 LRAFLKRKGALKPST-------------AVRFALDIARGMNYLHENKPVPIIHRDLEPSN 283
L+++L+ +L+P ++ A +IA GM YL+ K +HRDL N
Sbjct: 106 LKSYLR---SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARN 159
Query: 284 ILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 342
+ +K+ DFG+++ + R R++APE K+ + T D++SF +
Sbjct: 160 CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 219
Query: 343 ILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAK 399
+L E+ P+ + +V K P P ++ +L+ CW P
Sbjct: 220 VLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV-----TDLMRMCWQFNPKM 274
Query: 400 RPTFRQIITRLE 411
RPTF +I+ L+
Sbjct: 275 RPTFLEIVNLLK 286
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 112/233 (48%), Gaps = 9/233 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +VA++++ + + +E+ ++++ ++PN+V +L + + +V EYL
Sbjct: 45 GQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G L + + + + + +LH N+ +IHRD++ NIL G++K+
Sbjct: 102 GSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKL 157
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +T ++ + T ++APEV + Y KVD++S ++ EMIEG PP+
Sbjct: 158 TDFGFCAQITPEQSKRSXMVGTP-YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
Query: 355 TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
++ A P + P KL A ++ + C KR + ++++
Sbjct: 217 LNENPLRALYLIATNGTPELQNPEKLSAI-FRDFLNRCLEMDVEKRGSAKELL 268
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 196 AFRDEL----ALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 68 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 126
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKED--R 309
+ ++ GM YL E+ +HRDL N+L K++DFG+SK L E+ +
Sbjct: 127 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 183
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAA 368
T ++ APE ++ +K DV+SF +++ E G P+ +EV
Sbjct: 184 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 243
Query: 369 RQR--PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
+R P P ++Y +L+ CW RP F + RL +
Sbjct: 244 GERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRLRN 284
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 47/250 (18%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK+ G + + ++ +
Sbjct: 81 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 140
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+G+ YL E I+HRD++PSNIL + G +K+ DFGVS L D +
Sbjct: 141 IKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRS 195
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQEMIEG---CPPFTMKH------------------ 358
Y++PE + Y + D++S L L EM G PP K
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 255
Query: 359 --------------DNEVPKA------YAARQRPPFKAPAKLYARGLKELIEECWNEKPA 398
D+ P A Y + PP K P+ +++ ++ + +C + PA
Sbjct: 256 RPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPP-KLPSGVFSLEFQDFVNKCLIKNPA 314
Query: 399 KRPTFRQIIT 408
+R +Q++
Sbjct: 315 ERADLKQLMV 324
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 12/216 (5%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQ--SSPMMIVTEYLPKGDLRAFL----KRKGALKPSTAV 253
E+ LL++++HPN+V++ + ++ + IV EY GDL + + K + L +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 254 RFALDIARGMNYLH--ENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL 311
R + + H + ++HRDL+P+N+ D N+K+ DFG++++L
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
Query: 312 TCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR 371
T T Y++PE Y+ K D++S +L E+ PPFT E+ A R+
Sbjct: 175 TFVGTP-YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL--AGKIREG 231
Query: 372 PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
+ P + Y+ L E+I N K RP+ +I+
Sbjct: 232 KFRRIPYR-YSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 116/266 (43%), Gaps = 43/266 (16%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVTQSSPMMIVTEYLPK 234
IQVAVK L E+ +D A EL ++ ++ H N+V LGA T S P+ ++ EY
Sbjct: 76 IQVAVKMLKEK--ADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCY 133
Query: 235 GDLRAFLKRK-----------------------GALKPSTAVRFALDIARGMNYLHENKP 271
GDL +L+ K L + FA +A+GM +L
Sbjct: 134 GDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC 193
Query: 272 VPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFKN 328
V HRDL N+L +K+ DFG+++ + D + + +++APE
Sbjct: 194 V---HRDLAARNVLVTHGKVVKICDFGLAR--DIMSDSNYVVRGNARLPVKWMAPESLFE 248
Query: 329 EEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEVPKAY--AARQRPPFKAPAKLYARG 384
Y K DV+S+ ++L E+ G P+ + D K + PF A ++Y
Sbjct: 249 GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYI-- 306
Query: 385 LKELIEECWNEKPAKRPTFRQIITRL 410
+++ CW KRP+F + + L
Sbjct: 307 ---IMQSCWAFDSRKRPSFPNLTSFL 329
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 23 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 139
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 200 AMLAGELPWDQPSDS 214
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 138
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 199 AMLAGELPWDQPSDS 213
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 23 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 139
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 200 AMLAGELPWDQPSDS 214
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 138
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 199 AMLAGELPWDQPSDS 213
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 138
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 199 AMLAGELPWDQPSDS 213
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 23 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 139
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 200 AMLAGELPWDQPSDS 214
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 23 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 139
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 200 AMLAGELPWDQPSDS 214
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 23 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 139
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 200 AMLAGELPWDQPSDS 214
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 196 AFRDEL----ALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 128
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKED--R 309
+ ++ GM YL E+ +HRDL N+L K++DFG+SK L E+ +
Sbjct: 129 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAA 368
T ++ APE ++ +K DV+SF +++ E G P+ +EV
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 245
Query: 369 RQR--PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
+R P P ++Y +L+ CW RP F + RL +
Sbjct: 246 GERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRLRN 286
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 138
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 199 AMLAGELPWDQPSDS 213
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 196 AFRDEL----ALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 128
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKED--R 309
+ ++ GM YL E+ +HRDL N+L K++DFG+SK L E+ +
Sbjct: 129 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAA 368
T ++ APE ++ +K DV+SF +++ E G P+ +EV
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 245
Query: 369 RQR--PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
+R P P ++Y +L+ CW RP F + RL +
Sbjct: 246 GERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRLRN 286
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 138
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 199 AMLAGELPWDQPSDS 213
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 138
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 199 AMLAGELPWDQPSDS 213
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 10/214 (4%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRA-FLKRKGALKPSTAVRFALD 258
E+ +L HPN+V+ L A + + I+ E+ G + A L+ + L S
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 116
Query: 259 IARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC 318
+NYLH+NK IIHRDL+ NIL G++K+ADFGVS T + +
Sbjct: 117 TLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTP 173
Query: 319 RYVAPEVF-----KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPP 373
++APEV K+ YD K DV+S + L EM E PP + V A + P
Sbjct: 174 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT 233
Query: 374 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
P++ ++ K+ +++C + R T Q++
Sbjct: 234 LAQPSR-WSSNFKDFLKKCLEKNVDARWTTSQLL 266
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 21 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 80
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 81 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 137
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 138 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 197
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 198 AMLAGELPWDQPSDS 212
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 23 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 139
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 200 AMLAGELPWDQPSDS 214
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 138
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 199 AMLAGELPWDQPSDS 213
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K + + R T Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAKRV---KGRTWXLXGTP-EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N++ D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + + H NVV+F G + + +
Sbjct: 22 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYL 81
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 82 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 138
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 199 AMLAGELPWDQPSDS 213
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K + + R T Y+APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAKRV---KGRTWXLAGTP-EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+APE+ ++ Y+ VD ++ +++ +M G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 10/214 (4%)
Query: 146 PEYEIDPHELDFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDE 200
P++ + +E ++ + KGTF IL + G A+K L +EVI D V E
Sbjct: 144 PKHRVTMNEFEYLKL--LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTE 201
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIA 260
+LQ RHP + + + V EY G+L L R+ A + +I
Sbjct: 202 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 261
Query: 261 RGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRY 320
++YLH K V ++RDL+ N++ D G++K+ DFG+ K +K+ + + Y
Sbjct: 262 SALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEY 318
Query: 321 VAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
+APEV ++ +Y VD + +++ EM+ G PF
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 10/214 (4%)
Query: 146 PEYEIDPHELDFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDE 200
P++ + +E ++ + KGTF IL + G A+K L +EVI D V E
Sbjct: 141 PKHRVTMNEFEYLKL--LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTE 198
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIA 260
+LQ RHP + + + V EY G+L L R+ A + +I
Sbjct: 199 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 258
Query: 261 RGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRY 320
++YLH K V ++RDL+ N++ D G++K+ DFG+ K +K+ + + Y
Sbjct: 259 SALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEY 315
Query: 321 VAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
+APEV ++ +Y VD + +++ EM+ G PF
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 34/260 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRA-FRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEY 231
G VAVK L E ++R+ ++ E+ +L+ + H ++V++ G + +V EY
Sbjct: 38 GEMVAVKALKEGC---GPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 94
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
+P G LR +L R + + + FA I GM YLH IHR L N+L D+
Sbjct: 95 VPLGSLRDYLPRH-CVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRL 150
Query: 292 LKVADFGVSKLL-------TVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
+K+ DFG++K + V+ED D+ + APE K ++ DV+SF + L
Sbjct: 151 VKIGDFGLAKAVPEGHEYYRVRED-----GDSPVFWYAPECLKECKFYYASDVWSFGVTL 205
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARG------------LKELIEEC 392
E++ C H + + +L RG + L++ C
Sbjct: 206 YELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNC 265
Query: 393 WNEKPAKRPTFRQIITRLES 412
W + + RPTF+ ++ L++
Sbjct: 266 WETEASFRPTFQNLVPILQT 285
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 34/260 (13%)
Query: 175 GIQVAVKKLGEEVISDDDRVRA-FRDELALLQKIRHPNVVQFLGAVTQSS--PMMIVTEY 231
G VAVK L E ++R+ ++ E+ +L+ + H ++V++ G + +V EY
Sbjct: 37 GEMVAVKALKEGC---GPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 93
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
+P G LR +L R + + + FA I GM YLH IHR L N+L D+
Sbjct: 94 VPLGSLRDYLPRH-CVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRL 149
Query: 292 LKVADFGVSKLL-------TVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
+K+ DFG++K + V+ED D+ + APE K ++ DV+SF + L
Sbjct: 150 VKIGDFGLAKAVPEGHEYYRVRED-----GDSPVFWYAPECLKECKFYYASDVWSFGVTL 204
Query: 345 QEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARG------------LKELIEEC 392
E++ C H + + +L RG + L++ C
Sbjct: 205 YELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNC 264
Query: 393 WNEKPAKRPTFRQIITRLES 412
W + + RPTF+ ++ L++
Sbjct: 265 WETEASFRPTFQNLVPILQT 284
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 13/195 (6%)
Query: 176 IQVAVKKLGEEVISDD--DRVRA------FRDELALLQKIRHPNVVQFLGAVTQSSPMMI 227
+Q+AV ++ EE ++ D RA + E+ + + H NVV+F G + + +
Sbjct: 23 VQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYL 82
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD 287
EY G+L ++ + A RF + G+ YLH + I HRD++P N+L D
Sbjct: 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLD 139
Query: 288 DSGNLKVADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQ 345
+ NLK++DFG++ + +R L + YVAPE+ K E+ + VDV+S ++L
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 346 EMIEGCPPFTMKHDN 360
M+ G P+ D+
Sbjct: 200 AMLAGELPWDQPSDS 214
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 156 DFTNSVEITKGTF---ILAFWRGIQ--VAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + + KG+F +L+ +G AVK L ++V+ DD V E +L P
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 211 NVVQFLGAVTQS-SPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHEN 269
+ L + Q+ + V EY+ GDL +++ G K AV +A +IA G+ +L
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 270 KPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNE 329
II+RDL+ N++ D G++K+ADFG+ K + + + Y+APE+ +
Sbjct: 141 G---IIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYIAPEIIAYQ 196
Query: 330 EYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
Y VD ++F ++L EM+ G PF + ++E+
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 229
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 108/257 (42%), Gaps = 54/257 (21%)
Query: 207 IRHPNVVQFLGA---VTQSSPM--MIVTEYLPKGDLRAFLKRKGALKPS---TAVRFALD 258
+ H N+ +F+ VT M ++V EY P G L +L +L S ++ R A
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHS 119
Query: 259 IARGMNYLHENKPV------PIIHRDLEPSNILRDDSGNLKVADFGVSKLLT-------V 305
+ RG+ YLH P I HRDL N+L + G ++DFG+S LT
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPG 179
Query: 306 KEDRPLTCQDTSCRYVAPEVFKN-------EEYDTKVDVFSFALILQEMIEGC------- 351
+ED + + RY+APEV + E +VD+++ LI E+ C
Sbjct: 180 EEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239
Query: 352 --PPFTMKHDNEVPK----------AYAARQRPPFKAPAK---LYARGLKELIEECWNEK 396
P + M EV +QRP F K L R LKE IE+CW++
Sbjct: 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQD 299
Query: 397 PAKRPTFRQIITRLESI 413
R T + R+ +
Sbjct: 300 AEARLTAQXAEERMAEL 316
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 196 AFRDEL----ALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 413 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 471
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKED--R 309
+ ++ GM YL E+ +HRDL N+L K++DFG+SK L E+ +
Sbjct: 472 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 528
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAA 368
T ++ APE ++ +K DV+SF +++ E G P+ +EV
Sbjct: 529 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 588
Query: 369 RQR--PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
+R P P ++Y +L+ CW RP F + RL +
Sbjct: 589 GERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRLRN 629
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 196 AFRDEL----ALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPST 251
A +DEL ++Q++ +P +V+ +G + ++ M+V E G L +L++ +K
Sbjct: 412 ALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKN 470
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKED--R 309
+ ++ GM YL E+ +HRDL N+L K++DFG+SK L E+ +
Sbjct: 471 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAA 368
T ++ APE ++ +K DV+SF +++ E G P+ +EV
Sbjct: 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 587
Query: 369 RQR--PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
+R P P ++Y +L+ CW RP F + RL +
Sbjct: 588 GERMGCPAGCPREMY-----DLMNLCWTYDVENRPGFAAVELRLRN 628
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 19/218 (8%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFAL 257
E+ +L HP +V+ LGA + I+ E+ P G + A + +G +P V
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCR 116
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT- 316
+ +N+LH + IIHRDL+ N+L G++++ADFGVS K + L +D+
Sbjct: 117 QMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSF 169
Query: 317 --SCRYVAPEV-----FKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAAR 369
+ ++APEV K+ YD K D++S + L EM + PP + V A
Sbjct: 170 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS 229
Query: 370 QRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
P P+K ++ ++ ++ ++ P RP+ Q++
Sbjct: 230 DPPTLLTPSK-WSVEFRDFLKIALDKNPETRPSAAQLL 266
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 30/252 (11%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + E S +R+ F +E ++++ +VV+ LG V++ P ++V E + GD
Sbjct: 50 RVAVKTVNESA-SLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 107
Query: 237 LRAFLKRKGALKPST-------------AVRFALDIARGMNYLHENKPVPIIHRDLEPSN 283
L+++L+ +L+P ++ A +IA GM YL+ K +HR+L N
Sbjct: 108 LKSYLR---SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARN 161
Query: 284 ILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 342
+ +K+ DFG+++ + R R++APE K+ + T D++SF +
Sbjct: 162 CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 221
Query: 343 ILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAK 399
+L E+ P+ + +V K P P + + +L+ CW P
Sbjct: 222 VLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER-----VTDLMRMCWQFNPNM 276
Query: 400 RPTFRQIITRLE 411
RPTF +I+ L+
Sbjct: 277 RPTFLEIVNLLK 288
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 30/252 (11%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+VAVK + E S +R+ F +E ++++ +VV+ LG V++ P ++V E + GD
Sbjct: 49 RVAVKTVNESA-SLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 237 LRAFLKRKGALKPST-------------AVRFALDIARGMNYLHENKPVPIIHRDLEPSN 283
L+++L+ +L+P ++ A +IA GM YL+ K +HR+L N
Sbjct: 107 LKSYLR---SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARN 160
Query: 284 ILRDDSGNLKVADFGVSK-LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFAL 342
+ +K+ DFG+++ + R R++APE K+ + T D++SF +
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 343 ILQEMIE-GCPPFTMKHDNEVPKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAK 399
+L E+ P+ + +V K P P + + +L+ CW P
Sbjct: 221 VLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER-----VTDLMRMCWQFNPNM 275
Query: 400 RPTFRQIITRLE 411
RPTF +I+ L+
Sbjct: 276 RPTFLEIVNLLK 287
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 19/218 (8%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFAL 257
E+ +L HP +V+ LGA + I+ E+ P G + A + +G +P V
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCR 124
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT- 316
+ +N+LH + IIHRDL+ N+L G++++ADFGVS K + L +D+
Sbjct: 125 QMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSF 177
Query: 317 --SCRYVAPEV-----FKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAAR 369
+ ++APEV K+ YD K D++S + L EM + PP + V A
Sbjct: 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS 237
Query: 370 QRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
P P+K ++ ++ ++ ++ P RP+ Q++
Sbjct: 238 DPPTLLTPSK-WSVEFRDFLKIALDKNPETRPSAAQLL 274
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 156 DFTNSVEITKGTF---ILAFWRGIQ--VAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + + KG+F +L+ +G AVK L ++V+ DD V E +L P
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 211 NVVQFLGAVTQS-SPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHEN 269
+ L + Q+ + V EY+ GDL +++ G K AV +A +IA G+ +L
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 270 KPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNE 329
II+RDL+ N++ D G++K+ADFG+ K + + + Y+APE+ +
Sbjct: 462 G---IIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYIAPEIIAYQ 517
Query: 330 EYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
Y VD ++F ++L EM+ G PF + ++E+
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 550
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 17/196 (8%)
Query: 166 GTFILAFWRGIQVAVKKLGEEV-ISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSP 224
G + VAVKKL V I+ ++ + F E+ + K +H N+V+ LG +
Sbjct: 36 GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDD 95
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPST---AVRFALDIARGMNYLHENKPVPIIHRDLEP 281
+ +V Y P G L L P + + A A G+N+LHEN IHRD++
Sbjct: 96 LCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKS 152
Query: 282 SNILRDDSGNLKVADFGVSK-----LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVD 336
+NIL D++ K++DFG+++ V R + + Y APE + E K D
Sbjct: 153 ANILLDEAFTAKISDFGLARASEKFAQXVXXSRIV----GTTAYXAPEALRG-EITPKSD 207
Query: 337 VFSFALILQEMIEGCP 352
++SF ++L E+I G P
Sbjct: 208 IYSFGVVLLEIITGLP 223
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 18/187 (9%)
Query: 199 DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFA 256
+E +L+K+ VV A + +V + GDL+ + G + AV +A
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+I G+ LH + I++RDL+P NIL DD G+++++D G++ + V E + + +
Sbjct: 293 AEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVG 347
Query: 317 SCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD-----------NEVPKA 365
+ Y+APEV KNE Y D ++ +L EMI G PF + EVP+
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE 407
Query: 366 YAARQRP 372
Y+ R P
Sbjct: 408 YSERFSP 414
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C + Y+AP + ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLC--GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 18/187 (9%)
Query: 199 DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFA 256
+E +L+K+ VV A + +V + GDL+ + G + AV +A
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+I G+ LH + I++RDL+P NIL DD G+++++D G++ + V E + + +
Sbjct: 293 AEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVG 347
Query: 317 SCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD-----------NEVPKA 365
+ Y+APEV KNE Y D ++ +L EMI G PF + EVP+
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE 407
Query: 366 YAARQRP 372
Y+ R P
Sbjct: 408 YSERFSP 414
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 28/224 (12%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQ--SSPMMIVTEYLPKGDLRAFL----KRKGALKPSTAV 253
E+ LL++++HPN+V++ + ++ + IV EY GDL + + K + L +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 254 RFALDIARGMNYLH--ENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL 311
R + + H + ++HRDL+P+N+ D N+K+ DFG++++L
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN------- 167
Query: 312 TCQDTSC--------RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVP 363
DTS Y++PE Y+ K D++S +L E+ PPFT E+
Sbjct: 168 --HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL- 224
Query: 364 KAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
A R+ + P + Y+ L E+I N K RP+ +I+
Sbjct: 225 -AGKIREGKFRRIPYR-YSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 9/171 (5%)
Query: 203 LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARG 262
LL+ +HPN++ + +VTE + G+L + R+ A I +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKT 128
Query: 263 MNYLHENKPVPIIHRDLEPSNILR-DDSGN---LKVADFGVSKLLTVKEDRPLTCQDTSC 318
+ YLH ++HRDL+PSNIL D+SGN +++ DFG +K L E+ L +
Sbjct: 129 VEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA-ENGLLMTPCYTA 184
Query: 319 RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAAR 369
+VAPEV + + YD D++S ++L M+ G PF D + P+ AR
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-DTPEEILAR 234
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L +EVI D V E +LQ RHP + + + V EY
Sbjct: 33 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 92
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G+L L R+ A + +I ++YLH K V ++RDL+ N++ D G++K+
Sbjct: 93 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKI 150
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG+ K +K+ + + Y+APEV ++ +Y VD + +++ EM+ G PF
Sbjct: 151 TDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L +EVI D V E +LQ RHP + + + V EY
Sbjct: 34 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 93
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G+L L R+ A + +I ++YLH K V ++RDL+ N++ D G++K+
Sbjct: 94 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKI 151
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG+ K +K+ + + Y+APEV ++ +Y VD + +++ EM+ G PF
Sbjct: 152 TDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L +EVI D V E +LQ RHP + + + V EY
Sbjct: 35 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 94
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G+L L R+ A + +I ++YLH K V ++RDL+ N++ D G++K+
Sbjct: 95 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKI 152
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG+ K +K+ + + Y+APEV ++ +Y VD + +++ EM+ G PF
Sbjct: 153 TDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 30/278 (10%)
Query: 163 ITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAV 219
I KG F + W G +VA++ + E ++D+++AF+ E+ ++ RH NVV F+GA
Sbjct: 41 IGKGRFGQVYHGRWHG-EVAIRLIDIER-DNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 220 TQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRD 278
+ I+T L + ++ K L + + A +I +GM YLH I+H+D
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKD 155
Query: 279 LEPSNILRDDSGNLKVADFGVSKLLTV-----KEDRPLTCQDTSCRYVAPEVFKNEEYDT 333
L+ N+ D+ G + + DFG+ + V +ED+ L Q+ ++APE+ + DT
Sbjct: 156 LKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDK-LRIQNGWLCHLAPEIIRQLSPDT 213
Query: 334 K---------VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARG 384
+ DVF+ I E+ PF + + +P +
Sbjct: 214 EEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIG--MGKE 271
Query: 385 LKELIEECWNEKPAKRPTFRQIITRLESI---NNSINH 419
+ +++ CW + +RPTF +++ LE + N ++H
Sbjct: 272 ISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSH 309
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 16/187 (8%)
Query: 176 IQVAVKKLGEEVISDDDRVR-AFRDELALLQKIR-HPNVVQFLGAVTQSSPMMIVTEYLP 233
++V ++L E + + VR A R E +L+++ HP+++ + + SS M +V + +
Sbjct: 127 MEVTAERLSPEQLEE---VREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMR 183
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLK 293
KG+L +L K AL + +++LH N I+HRDL+P NIL DD+ ++
Sbjct: 184 KGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIR 240
Query: 294 VADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFK------NEEYDTKVDVFSFALILQEM 347
++DFG S L E C Y+APE+ K + Y +VD+++ +IL +
Sbjct: 241 LSDFGFSCHLEPGEKLRELCGTPG--YLAPEILKCSMDETHPGYGKEVDLWACGVILFTL 298
Query: 348 IEGCPPF 354
+ G PPF
Sbjct: 299 LAGSPPF 305
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G A+K L ++ + ++ +E +LQ + P +V+ + +S + +V EY+
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G++ + L+R G A +A I YLH + +I+RDL+P N+L D G ++V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
DFG +K VK C +APE+ ++ Y+ VD ++ +++ EM G PPF
Sbjct: 183 TDFGFAK--RVKGRTWXLCGTPEA--LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 127/276 (46%), Gaps = 24/276 (8%)
Query: 154 ELDFTNSVEITKGTFILAFWRGIQVAVK--KLGEEVISDDDRVRAFRDELALLQKIRHPN 211
EL N + +G + + + I VA+K K G E ++ +R E ++ ++ +P
Sbjct: 343 ELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEMMR----EAQIMHQLDNPY 397
Query: 212 VVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFAL-DIARGMNYLHENK 270
+V+ +G V Q+ +M+V E G L FL K P + V L ++ GM YL E
Sbjct: 398 IVRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 271 PVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS---CRYVAPEVFK 327
+HR+L N+L + K++DFG+SK L +D T + ++ APE
Sbjct: 457 ---FVHRNLAARNVLLVNRHYAKISDFGLSKALGA-DDSYYTARSAGKWPLKWYAPECIN 512
Query: 328 NEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPK--AYAARQRPPFKAPAKLYARG 384
++ ++ DV+S+ + + E + G P+ EV R P + P +LYA
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYA-- 570
Query: 385 LKELIEECWNEKPAKRPTFRQIITRLESINNSINHK 420
L+ +CW K RP F + R+ + S+ K
Sbjct: 571 ---LMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 603
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 203 LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARG 262
LL+ +HPN++ + +VTE + G+L + R+ A I +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT 133
Query: 263 MNYLHENKPVPIIHRDLEPSNILR-DDSGN---LKVADFGVSKLLTVKEDRPLTCQDTSC 318
+ YLH ++HRDL+PSNIL D+SGN L++ DFG +K L E+ L +
Sbjct: 134 VEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA-ENGLLMTPCYTA 189
Query: 319 RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
+VAPEV K + YD D++S ++L M+ G PF
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 118/272 (43%), Gaps = 22/272 (8%)
Query: 150 IDPHELDF-TNSVEITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIR 208
ID +L+F T E G W+G + VK L S + R F +E L+
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTR-KSRDFNEECPRLRIFS 65
Query: 209 HPNVVQFLGAVTQSSPM---MIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGM 263
HPNV+ LGA QS P ++T + P G L L + S AV+FALD ARG
Sbjct: 66 HPNVLPVLGAC-QSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGX 124
Query: 264 NYLHENKP-VPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVA 322
+LH +P +P + I D + + AD S + P +VA
Sbjct: 125 AFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPA--------WVA 176
Query: 323 PEVFKNEEYDTK---VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 379
PE + + DT D +SFA++L E++ PF + E+ A P P
Sbjct: 177 PEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPG- 235
Query: 380 LYARGLKELIEECWNEKPAKRPTFRQIITRLE 411
+ + +L + C NE PAKRP F I+ LE
Sbjct: 236 -ISPHVSKLXKICXNEDPAKRPKFDXIVPILE 266
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 203 LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARG 262
LL+ +HPN++ + +VTE + G+L + R+ A I +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT 133
Query: 263 MNYLHENKPVPIIHRDLEPSNILR-DDSGN---LKVADFGVSKLLTVKEDRPLTCQDTSC 318
+ YLH ++HRDL+PSNIL D+SGN L++ DFG +K L E+ L +
Sbjct: 134 VEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA-ENGLLMTPCYTA 189
Query: 319 RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
+VAPEV K + YD D++S ++L M+ G PF
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 125/258 (48%), Gaps = 26/258 (10%)
Query: 199 DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALD 258
+E+A+L+ + HPN+++ +V E G+L + + A
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQ 144
Query: 259 IARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQD 315
+ G+ YLH++ I+HRDL+P N+L ++ +K+ DFG+S + + + + +
Sbjct: 145 VLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF--ENQKKMKERL 199
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFK 375
+ Y+APEV + ++YD K DV+S +IL ++ G PPF + D E+ + + + F
Sbjct: 200 GTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRK-VEKGKYTFD 257
Query: 376 APA-KLYARGLKELIEECWNEKPAKRPTFRQII---------------TRLESINNSINH 419
+P K + G K+LI++ +R + +Q + L S+ N+I +
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIEN 317
Query: 420 KRRWKVYLFLSLSVCLHL 437
R+++ L+ + L++
Sbjct: 318 MRKFQNSQKLAQAALLYM 335
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFL----KRKGALKPSTAVRF 255
E+ +L+ + HPN+++ M IV E G+L + R AL
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS---GNLKVADFGVSKLLTVKEDRPLT 312
+ + Y H ++H+DL+P NIL D+ +K+ DFG+++L K D T
Sbjct: 130 MKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF--KSDEHST 184
Query: 313 CQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRP 372
+ Y+APEVFK + K D++S +++ ++ GC PFT EV + A + P
Sbjct: 185 NAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK-ATYKEP 242
Query: 373 PFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
+ + +L+++ + P +RP+ Q++
Sbjct: 243 NYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVL 277
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 109/201 (54%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R T + + Y APE+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 177
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMV 198
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 101/193 (52%), Gaps = 15/193 (7%)
Query: 220 TQSSPMMIVTEYLPKGDLRAFL-KRKG-ALKPSTAVRFALDIARGMNYLHENKPVPIIHR 277
+++ + I E+ KG L ++ KR+G L A+ I +G++Y+H K +IHR
Sbjct: 104 SKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LIHR 160
Query: 278 DLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDV 337
DL+PSNI D+ +K+ DFG+ + ++K D T + RY++PE +++Y +VD+
Sbjct: 161 DLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDL 218
Query: 338 FSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKP 397
++ LIL E++ C E K + + + ++ + K L+++ ++KP
Sbjct: 219 YALGLILAELLHVCDTAF-----ETSKFFTDLRDGII---SDIFDKKEKTLLQKLLSKKP 270
Query: 398 AKRPTFRQIITRL 410
RP +I+ L
Sbjct: 271 EDRPNTSEILRTL 283
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 126/286 (44%), Gaps = 19/286 (6%)
Query: 129 GAKPLMAPMHVKHAREVPEYEIDPHELD-FTNSVEITKGTFILAFWRGIQ-----VAVKK 182
G+ P AP+ +E+P+ +DP + + + KG F + A K
Sbjct: 4 GSDPKSAPL-----KEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKV 58
Query: 183 LGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK 242
+ + ++ + E+A+ + + +P+VV F G + +V E + L K
Sbjct: 59 VPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK 118
Query: 243 RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKL 302
R+ A+ A F +G+ YLH N+ +IHRDL+ N+ +D ++K+ DFG++
Sbjct: 119 RRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATK 175
Query: 303 LTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
+ +R T Y+APEV + + +VD++S IL ++ G PPF E
Sbjct: 176 IEFDGERKKDLCGTP-NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKE- 233
Query: 363 PKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIIT 408
Y ++ + P + LI + P RP+ +++T
Sbjct: 234 --TYIRIKKNEYSVPRHINPVA-SALIRRMLHADPTLRPSVAELLT 276
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 5/192 (2%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIR-HPNVVQFLGAVTQSSPMMIVTEYLP 233
G AVK L ++VI DD V E +L R HP + Q + V E++
Sbjct: 48 GDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLK 293
GDL +++ + A +A +I + +LH+ II+RDL+ N+L D G+ K
Sbjct: 108 GGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCK 164
Query: 294 VADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPP 353
+ADFG+ K T T Y+APE+ + Y VD ++ ++L EM+ G P
Sbjct: 165 LADFGMCKEGICNGVTTATFCGTP-DYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
Query: 354 FTMKHDNEVPKA 365
F ++++++ +A
Sbjct: 224 FEAENEDDLFEA 235
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R T + + Y APE+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 177
Query: 329 EE-YDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMV 198
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 69
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R T + + Y APE+
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 184
Query: 329 EE-YDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMV 205
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 99/194 (51%), Gaps = 19/194 (9%)
Query: 178 VAVKKL--GEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
VAVK + GE++ D+ V+ E+ + +RHPN+V+F + + + IV EY G
Sbjct: 47 VAVKYIERGEKI---DENVKR---EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 100
Query: 236 DLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS--GNLK 293
+L + G A F + G++Y H + + HRDL+ N L D S LK
Sbjct: 101 ELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ---VAHRDLKLENTLLDGSPAPRLK 157
Query: 294 VADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV-DVFSFALILQEMIEGCP 352
+ADFG SK +V +P + T Y+APEV +EYD KV DV+S + L M+ G
Sbjct: 158 IADFGYSK-ASVLHSQPKSAVGTPA-YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAY 215
Query: 353 PFTMKHDNEVPKAY 366
PF D E PK +
Sbjct: 216 PF---EDPEEPKNF 226
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 196 AFRD-----ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPS 250
AFRD E+A+L+KI+H N+V ++ +V + + G+L + +G
Sbjct: 47 AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK 106
Query: 251 TAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILR---DDSGNLKVADFGVSKLLTVKE 307
A + + YLHEN I+HRDL+P N+L +++ + + DFG+SK+ ++
Sbjct: 107 DASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQ 160
Query: 308 DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
+ ++ + YVAPEV + Y VD +S +I ++ G PPF
Sbjct: 161 NGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+A+ + + +P+VV F G + +V E + L KR+ A+ A F
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+G+ YLH N+ +IHRDL+ N+ +D ++K+ DFG++ + +R T T
Sbjct: 152 IQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTP-N 207
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 379
Y+APEV + + +VD++S IL ++ G PPF E Y ++ + P
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKE---TYIRIKKNEYSVPRH 264
Query: 380 LYARGLKELIEECWNEKPAKRPTFRQIIT 408
+ LI + P RP+ +++T
Sbjct: 265 INPVA-SALIRRMLHADPTLRPSVAELLT 292
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 112/229 (48%), Gaps = 31/229 (13%)
Query: 200 ELALLQKIRHPNVVQFLG----------------AVTQSSPMMIVTEYLPKGDLRAFL-K 242
E+ L K+ H N+V + G + +++ + I E+ KG L ++ K
Sbjct: 54 EVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 113
Query: 243 RKG-ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSK 301
R+G L A+ I +G++Y+H K +I+RDL+PSNI D+ +K+ DFG+
Sbjct: 114 RRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGL-- 168
Query: 302 LLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNE 361
+ ++K D + RY++PE +++Y +VD+++ LIL E++ C E
Sbjct: 169 VTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF-----E 223
Query: 362 VPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRL 410
K + + + ++ + K L+++ ++KP RP +I+ L
Sbjct: 224 TSKFFTDLRDGII---SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 69
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R T + + Y APE+
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 184
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMV 205
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 63
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R T + + Y APE+
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 178
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMV 199
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R T + + Y APE+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 177
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMV 198
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R T + + Y APE+
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 176
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMV 197
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 66
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R T + + Y APE+
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 181
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMV 202
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 118/273 (43%), Gaps = 14/273 (5%)
Query: 142 AREVPEYEIDPHELDFTNSVE-ITKGTFILAFWRGIQ-----VAVKKLGEEVISDDDRVR 195
A+E+PE +DP + KG F F A K + + ++ +
Sbjct: 3 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 62
Query: 196 AFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF 255
E+++ + + H +VV F G + + +V E + L KR+ AL A +
Sbjct: 63 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY 122
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 315
I G YLH N+ +IHRDL+ N+ ++ +K+ DFG++ + +R T
Sbjct: 123 LRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG 179
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFK 375
T Y+APEV + + +VDV+S I+ ++ G PPF E Y ++ +
Sbjct: 180 TP-NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLRIKKNEYS 235
Query: 376 APAKLYARGLKELIEECWNEKPAKRPTFRQIIT 408
P + LI++ P RPT +++
Sbjct: 236 IPKHINPVA-ASLIQKMLQTDPTARPTINELLN 267
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R T + + Y APE+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 177
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMV 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R T + + Y APE+
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 176
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMV 197
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 9/193 (4%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G + A+K + + ++ A DE+A+L+++ HPN+++ +V E
Sbjct: 46 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRG 105
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN--- 291
G+L + + A + G YLH++ I+HRDL+P N+L +
Sbjct: 106 GELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDAL 162
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
+K+ DFG+S V + + + Y+APEV + ++YD K DV+S +IL ++ G
Sbjct: 163 IKIVDFGLSAHFEV--GGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGY 219
Query: 352 PPFTMKHDNEVPK 364
PPF + D E+ K
Sbjct: 220 PPFGGQTDQEILK 232
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 118/273 (43%), Gaps = 14/273 (5%)
Query: 142 AREVPEYEIDPHELDFTNSVE-ITKGTFILAFWRGIQ-----VAVKKLGEEVISDDDRVR 195
A+E+PE +DP + KG F F A K + + ++ +
Sbjct: 3 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 62
Query: 196 AFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF 255
E+++ + + H +VV F G + + +V E + L KR+ AL A +
Sbjct: 63 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY 122
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 315
I G YLH N+ +IHRDL+ N+ ++ +K+ DFG++ + +R T
Sbjct: 123 LRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG 179
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFK 375
T Y+APEV + + +VDV+S I+ ++ G PPF E Y ++ +
Sbjct: 180 TP-NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLRIKKNEYS 235
Query: 376 APAKLYARGLKELIEECWNEKPAKRPTFRQIIT 408
P + LI++ P RPT +++
Sbjct: 236 IPKHINPVA-ASLIQKMLQTDPTARPTINELLN 267
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 100/194 (51%), Gaps = 23/194 (11%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQF------LGAVTQSSPMMIV 228
G QVA+K+ +E +S +R R + E+ +++K+ HPNVV L + + ++
Sbjct: 40 GEQVAIKQCRQE-LSPKNRER-WCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 97
Query: 229 TEYLPKGDLRAFLKR---KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI- 284
EY GDLR +L + LK DI+ + YLHEN+ IIHRDL+P NI
Sbjct: 98 MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIV 154
Query: 285 LRDDSGNL--KVADFGVSKLLTVKEDRPLTCQD--TSCRYVAPEVFKNEEYDTKVDVFSF 340
L+ L K+ D G +K L D+ C + + +Y+APE+ + ++Y VD +SF
Sbjct: 155 LQPGPQRLIHKIIDLGYAKEL----DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 210
Query: 341 ALILQEMIEGCPPF 354
+ E I G PF
Sbjct: 211 GTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 100/194 (51%), Gaps = 23/194 (11%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQF------LGAVTQSSPMMIV 228
G QVA+K+ +E +S +R R + E+ +++K+ HPNVV L + + ++
Sbjct: 39 GEQVAIKQCRQE-LSPKNRER-WCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 96
Query: 229 TEYLPKGDLRAFLKR---KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI- 284
EY GDLR +L + LK DI+ + YLHEN+ IIHRDL+P NI
Sbjct: 97 MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIV 153
Query: 285 LRDDSGNL--KVADFGVSKLLTVKEDRPLTCQD--TSCRYVAPEVFKNEEYDTKVDVFSF 340
L+ L K+ D G +K L D+ C + + +Y+APE+ + ++Y VD +SF
Sbjct: 154 LQPGPQRLIHKIIDLGYAKEL----DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 209
Query: 341 ALILQEMIEGCPPF 354
+ E I G PF
Sbjct: 210 GTLAFECITGFRPF 223
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 121/264 (45%), Gaps = 19/264 (7%)
Query: 151 DPHEL--DFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
DP E +F E + G +A + G QVAVKK+ + R +E+ +++
Sbjct: 42 DPREYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMD---LRKQQRRELLFNEVVIMRD 98
Query: 207 IRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
H NVV + + +V E+L G L + + A L + R ++YL
Sbjct: 99 YHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT-VCLSVLRALSYL 157
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVF 326
H +IHRD++ +IL G +K++DFG ++ KE + ++APEV
Sbjct: 158 HNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVS-KEVPKRKXLVGTPYWMAPEVI 213
Query: 327 KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR---PPFKAPAKLYAR 383
Y T+VD++S +++ EMI+G PP+ NE P R R PP +
Sbjct: 214 SRLPYGTEVDIWSLGIMVIEMIDGEPPYF----NEPPLQAMRRIRDSLPPRVKDLHKVSS 269
Query: 384 GLKELIEECWNEKPAKRPTFRQII 407
L+ ++ +P++R T ++++
Sbjct: 270 VLRGFLDLMLVREPSQRATAQELL 293
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 108/217 (49%), Gaps = 29/217 (13%)
Query: 154 ELDFTNSVEITKGTFILAFWRGI----QVAVKKLGEEVISDDDRVRAFRDELALLQKIRH 209
E+ +TN I G+F + F + +VA+KK + D R + EL +++ ++H
Sbjct: 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKK-----VLQDKRFK--NRELQIMRIVKH 91
Query: 210 PNVVQFLGAVTQSSP-------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFALDI 259
PNVV L A S+ + +V EY+P+ RA + K K + + +
Sbjct: 92 PNVVD-LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL 150
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDD-SGNLKVADFGVSKLLTVKEDRPLTCQDTSC 318
R + Y+H + I HRD++P N+L D SG LK+ DFG +K+L E P S
Sbjct: 151 LRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE--PNVSXICSR 205
Query: 319 RYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
Y APE +F Y T +D++S ++ E+++G P F
Sbjct: 206 YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF 242
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VAVK + D++ R E+ + +RHPN+V+F + + + I+ EY G+L
Sbjct: 48 VAVKYIERGAAIDENVQR----EIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL 103
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS--GNLKVA 295
+ G A F + G++Y H + I HRDL+ N L D S LK+
Sbjct: 104 YERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKIC 160
Query: 296 DFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV-DVFSFALILQEMIEGCPPF 354
DFG SK +V +P + T Y+APEV +EYD K+ DV+S + L M+ G PF
Sbjct: 161 DFGYSK-SSVLHSQPKSTVGTPA-YIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPF 218
Query: 355 TMKHDNEVPKAY 366
D E P+ Y
Sbjct: 219 ---EDPEEPRDY 227
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 118/273 (43%), Gaps = 14/273 (5%)
Query: 142 AREVPEYEIDPHELDFTNSVE-ITKGTFILAFWRGIQ-----VAVKKLGEEVISDDDRVR 195
A+E+PE +DP + KG F F A K + + ++ +
Sbjct: 7 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 66
Query: 196 AFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF 255
E+++ + + H +VV F G + + +V E + L KR+ AL A +
Sbjct: 67 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY 126
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 315
I G YLH N+ +IHRDL+ N+ ++ +K+ DFG++ + +R T
Sbjct: 127 LRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG 183
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFK 375
T Y+APEV + + +VDV+S I+ ++ G PPF E Y ++ +
Sbjct: 184 TP-NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLRIKKNEYS 239
Query: 376 APAKLYARGLKELIEECWNEKPAKRPTFRQIIT 408
P + LI++ P RPT +++
Sbjct: 240 IPKHINPVA-ASLIQKMLQTDPTARPTINELLN 271
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 11/251 (4%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G VA+K + + + D + + E+ L+ +RH ++ Q + ++ + +V EY P
Sbjct: 35 GEMVAIKIMDKNTLGSD--LPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPG 92
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
G+L ++ + L I + Y+H HRDL+P N+L D+ LK+
Sbjct: 93 GELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKL 149
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEY-DTKVDVFSFALILQEMIEGCPP 353
DFG+ +D L S Y APE+ + + Y ++ DV+S ++L ++ G P
Sbjct: 150 IDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLP 209
Query: 354 FTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
F D+ V Y R + P L + L+++ P KR + + ++ I
Sbjct: 210 FD---DDNVMALYKKIMRGKYDVPKWLSPSSIL-LLQQMLQVDPKKRISMKNLLNH-PWI 264
Query: 414 NNSINHKRRWK 424
N+ W+
Sbjct: 265 MQDYNYPVEWQ 275
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 97/194 (50%), Gaps = 19/194 (9%)
Query: 178 VAVKKL--GEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
VAVK + GE++ ++ R E+ + +RHPN+V+F + + + IV EY G
Sbjct: 47 VAVKYIERGEKIAANVKR------EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 100
Query: 236 DLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS--GNLK 293
+L + G A F + G++Y H + + HRDL+ N L D S LK
Sbjct: 101 ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLK 157
Query: 294 VADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV-DVFSFALILQEMIEGCP 352
+ DFG SK +V +P + T Y+APEV +EYD KV DV+S + L M+ G
Sbjct: 158 ICDFGYSK-SSVLHSQPKSTVGTPA-YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAY 215
Query: 353 PFTMKHDNEVPKAY 366
PF D E PK +
Sbjct: 216 PF---EDPEEPKNF 226
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 9/171 (5%)
Query: 203 LLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARG 262
LL+ +HPN++ + +VTE G+L + R+ A I +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKT 128
Query: 263 MNYLHENKPVPIIHRDLEPSNILR-DDSGN---LKVADFGVSKLLTVKEDRPLTCQDTSC 318
+ YLH ++HRDL+PSNIL D+SGN +++ DFG +K L E+ L +
Sbjct: 129 VEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA-ENGLLXTPCYTA 184
Query: 319 RYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAAR 369
+VAPEV + + YD D++S ++L + G PF D + P+ AR
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD-DTPEEILAR 234
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 108/204 (52%), Gaps = 14/204 (6%)
Query: 153 HELDFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
H +F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++
Sbjct: 2 HMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 60
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNY 265
HPN+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 266 LHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEV 325
H ++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 120 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEI 175
Query: 326 FKN-EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 133/281 (47%), Gaps = 47/281 (16%)
Query: 173 WRGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQKIRHPNVVQFLGAVT----QSSPMMI 227
W+G VAVK + S D FR+ EL +RH N++ F+ + S+ + +
Sbjct: 58 WQGENVAVK-----IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 112
Query: 228 VTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH------ENKPVPIIHRDLEP 281
+T Y G L +L+ L + +R L IA G+ +LH + KP I HRDL+
Sbjct: 113 ITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKS 170
Query: 282 SNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD---TSCRYVAPEVF----KNEEYDT- 333
NIL +G +AD G++ + + ++ + + RY+APEV + + +D+
Sbjct: 171 KNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSY 230
Query: 334 -KVDVFSFALILQE----MIEGC------PPF--TMKHD---NEVPKAYAARQRPPFKAP 377
+VD+++F L+L E M+ PPF + +D ++ K Q+ P P
Sbjct: 231 KRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRP-NIP 289
Query: 378 AKLYA----RGLKELIEECWNEKPAKRPTFRQIITRLESIN 414
+ ++ L +L++ECW + P+ R T +I L I+
Sbjct: 290 NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 330
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 156 DFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + KGTF IL + G A+K L +EVI D V E +LQ RHP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENK 270
+ A + V EY G+L L R+ A + +I + YLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 271 PVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEE 330
+++RD++ N++ D G++K+ DFG+ K + + + + Y+APEV ++ +
Sbjct: 126 ---VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 331 YDTKVDVFSFALILQEMIEGCPPF 354
Y VD + +++ EM+ G PF
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 9/193 (4%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G + A+K + + ++ A DE+A+L+++ HPN+++ +V E
Sbjct: 29 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRG 88
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN--- 291
G+L + + A + G YLH++ I+HRDL+P N+L +
Sbjct: 89 GELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDAL 145
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
+K+ DFG+S V + + + Y+APEV + ++YD K DV+S +IL ++ G
Sbjct: 146 IKIVDFGLSAHFEV--GGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGY 202
Query: 352 PPFTMKHDNEVPK 364
PPF + D E+ K
Sbjct: 203 PPFGGQTDQEILK 215
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 138/292 (47%), Gaps = 52/292 (17%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQKIRHPNVVQFLGAVT 220
E+ +G+ W+G VAVK + S D FR+ EL +RH N++ F+ +
Sbjct: 23 EVWRGS-----WQGENVAVK-----IFSSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 221 ----QSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH------ENK 270
S+ + ++T Y G L +L+ L + +R L IA G+ +LH + K
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 271 PVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD---TSCRYVAPEVF- 326
P I HRDL+ NIL +G +AD G++ + + ++ + + RY+APEV
Sbjct: 132 PA-IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 190
Query: 327 ---KNEEYDT--KVDVFSFALILQE----MIEGC------PPF--TMKHD---NEVPKAY 366
+ + +D+ +VD+++F L+L E M+ PPF + +D ++ K
Sbjct: 191 ETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVV 250
Query: 367 AARQRPPFKAPAKLYA----RGLKELIEECWNEKPAKRPTFRQIITRLESIN 414
Q+ P P + ++ L +L++ECW + P+ R T +I L I+
Sbjct: 251 CVDQQRP-NIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 301
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 156 DFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + KGTF IL + G A+K L +EVI D V E +LQ RHP
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 68
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENK 270
+ A + V EY G+L L R+ A + +I + YLH
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 128
Query: 271 PVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEE 330
+++RD++ N++ D G++K+ DFG+ K + + + + Y+APEV ++ +
Sbjct: 129 ---VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDND 184
Query: 331 YDTKVDVFSFALILQEMIEGCPPF 354
Y VD + +++ EM+ G PF
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 156 DFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + KGTF IL + G A+K L +EVI D V E +LQ RHP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENK 270
+ A + V EY G+L L R+ A + +I + YLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 271 PVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEE 330
+++RD++ N++ D G++K+ DFG+ K + + + + Y+APEV ++ +
Sbjct: 126 ---VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 331 YDTKVDVFSFALILQEMIEGCPPF 354
Y VD + +++ EM+ G PF
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 138/292 (47%), Gaps = 52/292 (17%)
Query: 162 EITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQKIRHPNVVQFLGAVT 220
E+ +G+ W+G VAVK + S D FR+ EL +RH N++ F+ +
Sbjct: 23 EVWRGS-----WQGENVAVK-----IFSSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 221 ----QSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH------ENK 270
S+ + ++T Y G L +L+ L + +R L IA G+ +LH + K
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 271 PVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD---TSCRYVAPEVF- 326
P I HRDL+ NIL +G +AD G++ + + ++ + + RY+APEV
Sbjct: 132 PA-IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 190
Query: 327 ---KNEEYDT--KVDVFSFALILQE----MIEGC------PPF--TMKHD---NEVPKAY 366
+ + +D+ +VD+++F L+L E M+ PPF + +D ++ K
Sbjct: 191 ETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVV 250
Query: 367 AARQRPPFKAPAKLYA----RGLKELIEECWNEKPAKRPTFRQIITRLESIN 414
Q+ P P + ++ L +L++ECW + P+ R T +I L I+
Sbjct: 251 CVDQQRP-NIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 301
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 45 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 101
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 102 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 158
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 159 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 218
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 219 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK 275
Query: 413 I 413
+
Sbjct: 276 M 276
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 123/279 (44%), Gaps = 24/279 (8%)
Query: 146 PEYEIDPHELDFTNSVEITKGTF-----ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDE 200
PE D D + EI +G + ++ G +AVK++ + + ++ + D
Sbjct: 13 PEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI-RSTVDEKEQKQLLMDL 71
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-----KGALKPSTAVRF 255
+++ P +VQF GA+ + I E L F K + +
Sbjct: 72 DVVMRSSDCPYIVQFYGALFREGDCWICME-LMSTSFDKFYKYVYSVLDDVIPEEILGKI 130
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 315
L + +N+L EN + IIHRD++PSNIL D SGN+K+ DFG+S L D +D
Sbjct: 131 TLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV---DSIAKTRD 185
Query: 316 TSCR-YVAPEVF----KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQ 370
CR Y+APE + YD + DV+S + L E+ G P+ + +
Sbjct: 186 AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKG 245
Query: 371 RPP--FKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
PP + + ++ + C + +KRP +++++
Sbjct: 246 DPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E++ + DL+ F+ P ++ + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R T + + Y APE+
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 176
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMV 197
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 156 DFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + KGTF IL + G A+K L +EVI D V E +LQ RHP
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 70
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENK 270
+ A + V EY G+L L R+ A + +I + YLH
Sbjct: 71 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 130
Query: 271 PVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEE 330
+++RD++ N++ D G++K+ DFG+ K + + + + Y+APEV ++ +
Sbjct: 131 ---VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDND 186
Query: 331 YDTKVDVFSFALILQEMIEGCPPF 354
Y VD + +++ EM+ G PF
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 48 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 104
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 105 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 161
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 162 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 221
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 222 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK 278
Query: 413 I 413
+
Sbjct: 279 M 279
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 156 DFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + KGTF IL + G A+K L +EVI D V E +LQ RHP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENK 270
+ A + V EY G+L L R+ A + +I + YLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 271 PVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEE 330
+++RD++ N++ D G++K+ DFG+ K + + + + Y+APEV ++ +
Sbjct: 126 ---VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 331 YDTKVDVFSFALILQEMIEGCPPF 354
Y VD + +++ EM+ G PF
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 98/194 (50%), Gaps = 19/194 (9%)
Query: 178 VAVKKL--GEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
VAVK + GE++ D+ V+ E+ + +RHPN+V+F + + + IV EY G
Sbjct: 46 VAVKYIERGEKI---DENVKR---EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 99
Query: 236 DLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS--GNLK 293
+L + G A F + G++Y H + + HRDL+ N L D S LK
Sbjct: 100 ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLK 156
Query: 294 VADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKV-DVFSFALILQEMIEGCP 352
+ DFG SK +V +P + T Y+APEV +EYD KV DV+S + L M+ G
Sbjct: 157 ICDFGYSK-SSVLHSQPKSTVGTPA-YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAY 214
Query: 353 PFTMKHDNEVPKAY 366
PF D E PK +
Sbjct: 215 PF---EDPEEPKNF 225
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 156 DFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + KGTF IL + G A+K L +EVI D V E +LQ RHP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENK 270
+ A + V EY G+L L R+ A + +I + YLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 271 PVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEE 330
+++RD++ N++ D G++K+ DFG+ K + + + + Y+APEV ++ +
Sbjct: 126 ---VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 331 YDTKVDVFSFALILQEMIEGCPPF 354
Y VD + +++ EM+ G PF
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 156 DFTNSVEITKGTF---ILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
DF + KGTF IL + G A+K L +EVI D V E +LQ RHP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENK 270
+ A + V EY G+L L R+ A + +I + YLH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 271 PVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEE 330
+++RD++ N++ D G++K+ DFG+ K + + + + Y+APEV ++ +
Sbjct: 126 ---VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 331 YDTKVDVFSFALILQEMIEGCPPF 354
Y VD + +++ EM+ G PF
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 180
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMV 201
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 55 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 111
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 112 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 168
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 169 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 228
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 229 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK 285
Query: 413 I 413
+
Sbjct: 286 M 286
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 45 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 101
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 102 XLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 158
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 159 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 218
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 219 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 275
Query: 413 I 413
+
Sbjct: 276 M 276
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 14/273 (5%)
Query: 142 AREVPEYEIDPHELDFTNSVE-ITKGTFILAFWRGIQ-----VAVKKLGEEVISDDDRVR 195
A+E+PE +DP + KG F F A K + + ++ +
Sbjct: 1 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 60
Query: 196 AFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF 255
E+++ + + H +VV F G + + +V E + L KR+ AL A +
Sbjct: 61 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY 120
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 315
I G YLH N+ +IHRDL+ N+ ++ +K+ DFG++ + +R
Sbjct: 121 LRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG 177
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFK 375
T Y+APEV + + +VDV+S I+ ++ G PPF E Y ++ +
Sbjct: 178 TP-NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLRIKKNEYS 233
Query: 376 APAKLYARGLKELIEECWNEKPAKRPTFRQIIT 408
P + LI++ P RPT +++
Sbjct: 234 IPKHINPVA-ASLIQKMLQTDPTARPTINELLN 265
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 204 LQKIRHPNVVQFLGAVTQS-----SPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFA 256
L+ HPNVV+ T S + + +V E++ + DL +L + + + T
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMM 126
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ RG+++LH ++ ++HRDL+P NIL SG +K+ADFG++++ + + LT
Sbjct: 127 FQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVV 181
Query: 317 SCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD 359
+ Y APEV Y T VD++S I EM P F D
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 204 LQKIRHPNVVQFLGAVTQS-----SPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFA 256
L+ HPNVV+ T S + + +V E++ + DL +L + + + T
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMM 126
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ RG+++LH ++ ++HRDL+P NIL SG +K+ADFG++++ + + LT
Sbjct: 127 FQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVV 181
Query: 317 SCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD 359
+ Y APEV Y T VD++S I EM P F D
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 20/176 (11%)
Query: 196 AFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL------RAFLKRKGALKP 249
+ +E+A+L+KI+H N+V + + +V + + G+L + F K A
Sbjct: 66 SIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDA--- 122
Query: 250 STAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGNLKVADFGVSKLLTVK 306
ST +R LD + YLH + I+HRDL+P N+L +D+ + ++DFG+SK+
Sbjct: 123 STLIRQVLD---AVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKG 176
Query: 307 EDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
+ C YVAPEV + Y VD +S +I ++ G PPF ++D+++
Sbjct: 177 DVMSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKL 230
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 8/209 (3%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+A+ + + +P+VV F G + +V E + L KR+ A+ A F
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+G+ YLH N+ +IHRDL+ N+ +D ++K+ DFG++ + +R T
Sbjct: 152 IQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTP-N 207
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 379
Y+APEV + + +VD++S IL ++ G PPF E Y ++ + P
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKE---TYIRIKKNEYSVPRH 264
Query: 380 LYARGLKELIEECWNEKPAKRPTFRQIIT 408
+ LI + P RP+ +++T
Sbjct: 265 INPVA-SALIRRMLHADPTLRPSVAELLT 292
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 204 LQKIRHPNVVQFLGAVTQS-----SPMMIVTEYLPKGDLRAFLKR--KGALKPSTAVRFA 256
L+ HPNVV+ T S + + +V E++ + DL +L + + + T
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMM 126
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ RG+++LH ++ ++HRDL+P NIL SG +K+ADFG++++ + + LT
Sbjct: 127 FQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVV 181
Query: 317 SCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD 359
+ Y APEV Y T VD++S I EM P F D
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 39 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 95
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 96 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 152
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 153 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 212
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 213 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 269
Query: 413 I 413
+
Sbjct: 270 M 270
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 66
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 181
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMV 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 180
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 64
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 179
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMV 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 180
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMV 201
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 13/160 (8%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVR-FALD 258
E++LL+ ++H N+V + + +V EYL K DL+ +L G + V+ F
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQ 108
Query: 259 IARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT-- 316
+ RG+ Y H K ++HRDL+P N+L ++ G LK+ADFG+++ ++ P D
Sbjct: 109 LLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSI----PTKTYDNEV 161
Query: 317 -SCRYVAPEV-FKNEEYDTKVDVFSFALILQEMIEGCPPF 354
+ Y P++ + +Y T++D++ I EM G P F
Sbjct: 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLF 201
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+ K+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R T + + Y APE+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 177
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+ K+ + ++ A R E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R T + + Y APE+
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 176
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMV 197
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 177
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMV 198
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 176
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMV 197
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 63
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 178
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMV 199
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 64
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 179
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMV 200
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 47 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 103
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 104 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 160
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 161 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 220
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 221 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 277
Query: 413 I 413
+
Sbjct: 278 M 278
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 177
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMV 198
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 48 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 104
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 105 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 161
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 162 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 221
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 222 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 278
Query: 413 I 413
+
Sbjct: 279 M 279
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 176
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMV 197
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 48 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 104
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 105 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 161
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 162 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 221
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 222 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 278
Query: 413 I 413
+
Sbjct: 279 M 279
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 8/209 (3%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+A+ + + +P+VV F G + +V E + L KR+ A+ A F
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
+G+ YLH N+ +IHRDL+ N+ +D ++K+ DFG++ + +R T
Sbjct: 152 IQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP-N 207
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 379
Y+APEV + + +VD++S IL ++ G PPF E Y ++ + P
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKE---TYIRIKKNEYSVPRH 264
Query: 380 LYARGLKELIEECWNEKPAKRPTFRQIIT 408
+ LI + P RP+ +++T
Sbjct: 265 INPVA-SALIRRMLHADPTLRPSVAELLT 292
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 45 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 101
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 102 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 158
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 159 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 218
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 219 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 275
Query: 413 I 413
+
Sbjct: 276 M 276
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 63
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 123 HR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 178
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMV 199
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 177
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMV 198
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 64
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 124 HR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 179
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMV 200
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 45 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 101
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 102 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 158
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 159 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 218
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 219 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 275
Query: 413 I 413
+
Sbjct: 276 M 276
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 177
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMV 198
>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265.
pdb|4HQD|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265
Length = 169
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 24 KEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQ 83
K A++N D DG L + A E E +K L+ G DVN +D D RT LH AA +
Sbjct: 59 KGADVNAKDSDGR-----TPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKE 113
Query: 84 GFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
G E+V LL+ +GADV+ D G TPL A + N E++KLLEK G
Sbjct: 114 GHKEIVKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N D DG L + A E E +K L+ G DVN +D D RT LH AA +G
Sbjct: 28 ADVNASDSDGR-----TPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGH 82
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
E+V LL+ +GADV+ KD G TPL A + E++KLL GA
Sbjct: 83 KEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGA 127
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%)
Query: 43 RLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPK 102
RL+ A + + +K+L+++G DVN D D RT LH AA +G E+V LL+ +GADV+ K
Sbjct: 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAK 66
Query: 103 DRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
D G TPL A + E++KLL GA
Sbjct: 67 DSDGRTPLHYAAKEGHKEIVKLLISKGA 94
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 142 AREVPEYEIDPHELD-----FTNSVEITKGTFILAFWRGIQVAVKKLGEEVISDDDRVRA 196
A VP+Y ID D F E+ +G + + + K +V+ +
Sbjct: 35 ASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI 94
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFA 256
R E+ +L ++ HPN+++ + + +V E + G+L + KG A
Sbjct: 95 VRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAV 154
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRDD---SGNLKVADFGVSKLLTVKEDRPLTC 313
I + YLHEN I+HRDL+P N+L LK+ADFG+SK++ + C
Sbjct: 155 KQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVC 211
Query: 314 QDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
Y APE+ + Y +VD++S +I ++ G PF
Sbjct: 212 GTPG--YCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 51 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 107
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 108 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 164
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 165 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 224
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 225 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 281
Query: 413 I 413
+
Sbjct: 282 M 282
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 52 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 108
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 109 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 165
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 166 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 225
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 226 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 282
Query: 413 I 413
+
Sbjct: 283 M 283
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 52 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 108
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 109 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 165
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 166 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 225
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 226 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 282
Query: 413 I 413
+
Sbjct: 283 M 283
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 23/266 (8%)
Query: 156 DFTNSVEITKGTFILAFWR------GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRH 209
D N E+ GT W+ G +AVK++ ++++ R D +L+
Sbjct: 26 DLENLGEMGSGT-CGQVWKMRFRKTGHVIAVKQMRRSGNKEENK-RILMDLDVVLKSHDC 83
Query: 210 PNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHEN 269
P +VQ G ++ + I E + + + +G + + + I + + YL E
Sbjct: 84 PYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143
Query: 270 KPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLT--VKEDRPLTCQDTSCRYVAPEVF- 326
V IHRD++PSNIL D+ G +K+ DFG+S L +DR C Y+APE
Sbjct: 144 HGV--IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGC----AAYMAPERID 197
Query: 327 ----KNEEYDTKVDVFSFALILQEMIEGCPPF-TMKHDNEVPKAYAARQRPPFKAPAKLY 381
+YD + DV+S + L E+ G P+ K D EV ++ PP +
Sbjct: 198 PPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV-LTKVLQEEPPLLPGHMGF 256
Query: 382 ARGLKELIEECWNEKPAKRPTFRQII 407
+ + +++C + KRP + +++
Sbjct: 257 SGDFQSFVKDCLTKDHRKRPKYNKLL 282
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 91/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 56 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 115
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 116 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 172
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R + T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 173 FGTAKVLSPESKQARANSFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 31/196 (15%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIR-HPNVVQFLGAV--------TQSSPM 225
G + A+K+L + +++++ RA E+ ++K+ HPN+VQF A T +
Sbjct: 53 GREYALKRL---LSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109
Query: 226 MIVTEYLPKGDLRAFLKR---KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
+++TE L KG L FLK+ +G L T ++ R + ++H KP PIIHRDL+
Sbjct: 110 LLLTE-LCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVE 167
Query: 283 NILRDDSGNLKVADFGVSKLLTVKEDRPLTCQ-----------DTSCRYVAPEV---FKN 328
N+L + G +K+ DFG + ++ D + Q +T+ Y PE+ + N
Sbjct: 168 NLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSN 227
Query: 329 EEYDTKVDVFSFALIL 344
K D+++ IL
Sbjct: 228 FPIGEKQDIWALGCIL 243
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 70 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 126
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 127 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 183
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 184 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 243
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 244 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 300
Query: 413 I 413
+
Sbjct: 301 M 301
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 5/155 (3%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
EL +L + P +V F GA + I E++ G L LK + + ++ +
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAV 123
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
RG+ YL E I+HRD++PSNIL + G +K+ DFGVS L D +
Sbjct: 124 LRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRS 178
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
Y+APE + Y + D++S L L E+ G P
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 115/234 (49%), Gaps = 12/234 (5%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K L E + F DE ++ + HP++V+ LG V S + +VT+ +P G
Sbjct: 68 IPVAIKILNETTGPKANV--EFMDEALIMASMDHPHLVRLLG-VCLSPTIQLVTQLMPHG 124
Query: 236 DLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L ++ + K + + + + IA+GM YL E + ++HRDL N+L ++K+
Sbjct: 125 CLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKI 181
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG+++LL E + +++A E ++ + DV+S+ + + E++ G
Sbjct: 182 TDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGK 241
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
P+ E+P +R P + P + + ++ +CW RP F+++
Sbjct: 242 PYDGIPTREIPDLLEKGERLP-QPP--ICTIDVYMVMVKCWMIDADSRPKFKEL 292
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L + DL+ F+ P ++ + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 122 HR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 177
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMV 198
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 115/234 (49%), Gaps = 12/234 (5%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K L E + F DE ++ + HP++V+ LG V S + +VT+ +P G
Sbjct: 45 IPVAIKILNETTGPKANV--EFMDEALIMASMDHPHLVRLLG-VCLSPTIQLVTQLMPHG 101
Query: 236 DLRAFL-KRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L ++ + K + + + + IA+GM YL E + ++HRDL N+L ++K+
Sbjct: 102 CLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKI 158
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG+++LL E + +++A E ++ + DV+S+ + + E++ G
Sbjct: 159 TDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGK 218
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
P+ E+P +R P + P + + ++ +CW RP F+++
Sbjct: 219 PYDGIPTREIPDLLEKGERLP-QPP--ICTIDVYMVMVKCWMIDADSRPKFKEL 269
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 106/201 (52%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 63
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L DL+ F+ P ++ + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 123 HR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 178
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMV 199
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 106/201 (52%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L DL+ F+ P ++ + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 125 HR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 180
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMV 201
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 91/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 60 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 119
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 120 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 176
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R + T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 177 FGTAKVLSPESKQARANSFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 8/209 (3%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+++ + + H +VV F G + + +V E + L KR+ AL A + I
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 148
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
G YLH N+ +IHRDL+ N+ ++ +K+ DFG++ + +R T
Sbjct: 149 VLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP-N 204
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 379
Y+APEV + + +VDV+S I+ ++ G PPF E Y ++ + P
Sbjct: 205 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLRIKKNEYSIPKH 261
Query: 380 LYARGLKELIEECWNEKPAKRPTFRQIIT 408
+ LI++ P RPT +++
Sbjct: 262 INPVA-ASLIQKMLQTDPTARPTINELLN 289
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 8/209 (3%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPS----TAVRF 255
E +L K+ +V A + + +V + GD+R + P A+ +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 315
I G+ +LH+ II+RDL+P N+L DD GN++++D G++ L + +
Sbjct: 295 TAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFK 375
T ++APE+ EEYD VD F+ + L EMI PF + + K R
Sbjct: 352 TP-GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV 410
Query: 376 APAKLYARGLKELIEECWNEKPAKRPTFR 404
++ K+ E + P KR FR
Sbjct: 411 TYPDKFSPASKDFCEALLQKDPEKRLGFR 439
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 8/209 (3%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPS----TAVRF 255
E +L K+ +V A + + +V + GD+R + P A+ +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 315
I G+ +LH+ II+RDL+P N+L DD GN++++D G++ L + +
Sbjct: 295 TAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFK 375
T ++APE+ EEYD VD F+ + L EMI PF + + K R
Sbjct: 352 TPG-FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV 410
Query: 376 APAKLYARGLKELIEECWNEKPAKRPTFR 404
++ K+ E + P KR FR
Sbjct: 411 TYPDKFSPASKDFCEALLQKDPEKRLGFR 439
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 109/226 (48%), Gaps = 10/226 (4%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 175
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 176 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
Query: 355 TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKR 400
++ + +A + + P K + + ++L+E+ KR
Sbjct: 235 RAGNEGLI---FAKIIKLEYDFPEKFFPKA-RDLVEKLLVLDATKR 276
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 106/201 (52%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L DL+ F+ P ++ + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 180
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMV 201
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 8/209 (3%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPS----TAVRF 255
E +L K+ +V A + + +V + GD+R + P A+ +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 315
I G+ +LH+ II+RDL+P N+L DD GN++++D G++ L + +
Sbjct: 295 TAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFK 375
T ++APE+ EEYD VD F+ + L EMI PF + + K R
Sbjct: 352 TPG-FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV 410
Query: 376 APAKLYARGLKELIEECWNEKPAKRPTFR 404
++ K+ E + P KR FR
Sbjct: 411 TYPDKFSPASKDFCEALLQKDPEKRLGFR 439
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 8/209 (3%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPS----TAVRF 255
E +L K+ +V A + + +V + GD+R + P A+ +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 315
I G+ +LH+ II+RDL+P N+L DD GN++++D G++ L + +
Sbjct: 295 TAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFK 375
T ++APE+ EEYD VD F+ + L EMI PF + + K R
Sbjct: 352 TPG-FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV 410
Query: 376 APAKLYARGLKELIEECWNEKPAKRPTFR 404
++ K+ E + P KR FR
Sbjct: 411 TYPDKFSPASKDFCEALLQKDPEKRLGFR 439
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 106/201 (52%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 64
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E+L DL+ F+ P ++ + + +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 179
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMV 200
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 119/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 42 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 98
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA GMNYL + + ++HRDL N+L ++K+
Sbjct: 99 CLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 155
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 156 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 215
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 216 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 272
Query: 413 I 413
+
Sbjct: 273 M 273
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 8/209 (3%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+++ + + H +VV F G + + +V E + L KR+ AL A + I
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 150
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCR 319
G YLH N+ +IHRDL+ N+ ++ +K+ DFG++ + +R T
Sbjct: 151 VLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP-N 206
Query: 320 YVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAK 379
Y+APEV + + +VDV+S I+ ++ G PPF E Y ++ + P
Sbjct: 207 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLRIKKNEYSIPKH 263
Query: 380 LYARGLKELIEECWNEKPAKRPTFRQIIT 408
+ LI++ P RPT +++
Sbjct: 264 INPVA-ASLIQKMLQTDPTARPTINELLN 291
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 119/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 47 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 103
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 104 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 160
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG +KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 161 TDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 220
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 221 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK 277
Query: 413 I 413
+
Sbjct: 278 M 278
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 56 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 115
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 116 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 172
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 173 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 117 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 173
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 174 FGTAKVLSPESKQARANAFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 41 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 100
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 101 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 157
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 158 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGC 118
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 175
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R + T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 176 FGTAKVLSPESKQARANSFVGTA-QYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 45/289 (15%)
Query: 166 GTFILAFWRGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQKIRHPNVVQFLGA----VT 220
G + WRG +VAVK V + FR+ E+ +RH N++ F+ A
Sbjct: 51 GEVWMGKWRGEKVAVK-----VFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTG 105
Query: 221 QSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH------ENKPVPI 274
+ + ++T+Y G L +LK L + ++ A G+ +LH + KP I
Sbjct: 106 SWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-I 163
Query: 275 IHRDLEPSNILRDDSGNLKVADFGVS-KLL--TVKEDRPLTCQDTSCRYVAPEVFKNE-- 329
HRDL+ NIL +G +AD G++ K + T + D P + + RY+ PEV
Sbjct: 164 AHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLN 223
Query: 330 ----EYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPK----------------AYAAR 369
+ D++SF LIL E+ C + + ++P +
Sbjct: 224 RNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKK 283
Query: 370 QRPPF--KAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNS 416
RP F + + R + +L+ ECW PA R T ++ L ++ S
Sbjct: 284 LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 16/232 (6%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+K L + I + R E+ + + HPN+++ + ++ EY P+G+L
Sbjct: 51 VALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL 110
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADF 297
L++ ++A + Y H K +IHRD++P N+L G LK+ADF
Sbjct: 111 YKELQKSCTFDEQRTATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADF 167
Query: 298 GVSKLLTVKEDRPLTCQDTSCR---YVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
G S P + T C Y+ PE+ + ++ KVD++ ++ E++ G PPF
Sbjct: 168 GWSV------HAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPF 221
Query: 355 TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
NE Y + K PA + G ++LI + P++R Q+
Sbjct: 222 ESASHNET---YRRIVKVDLKFPASV-PTGAQDLISKLLRHNPSERLPLAQV 269
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 107/217 (49%), Gaps = 10/217 (4%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 175
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 176 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
Query: 355 TMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEE 391
++ + +A + + P K + + ++L+E+
Sbjct: 235 RAGNEGLI---FAKIIKLEYDFPEKFFPKA-RDLVEK 267
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 35 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 94
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 95 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 151
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 152 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 15/184 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY----- 231
+VAVKKL S R +R EL LL+ ++H NV+ L T ++ + +E
Sbjct: 55 KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
L DL +K + AL + RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 114 LMGADLNNIVKSQ-ALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSE 169
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMIEG 350
L++ DFG+++ + D +T + Y APE+ N Y+ VD++S I+ E+++G
Sbjct: 170 LRILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 351 CPPF 354
F
Sbjct: 226 KALF 229
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 175
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 176 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 175
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 176 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 36 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 95
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 96 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 152
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 153 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 16/213 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G+++AVKKL S R +R EL LL+ ++H NV+ L T ++ + + +
Sbjct: 76 GLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLV 134
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 135 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 190
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 191 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELL 246
Query: 349 EGCPPF-TMKHDNEVPKAYAARQRPPFKAPAKL 380
G F H N++ + PP +++
Sbjct: 247 TGRTLFPGTDHINQLQQIMRLTGTPPASVISRM 279
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 117 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 173
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 174 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 34 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 93
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 94 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 150
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 151 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 117 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 173
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 174 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 64 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGE 123
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 124 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 180
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 181 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 117 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 173
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 174 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 60 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 119
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 120 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 176
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 177 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 118
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 119 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 175
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 176 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 29/261 (11%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+++L+++ HPN++ + ++++ E + G+L FL +K +L A F I
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSG----NLKVADFGVSKLLTVKEDRPLTCQD 315
G+NYLH K I H DL+P NI+ D ++K+ DFG++ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIF 179
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF-------TMKHDNEVPKAYAA 368
+ +VAPE+ E + D++S +I ++ G PF T+ + V +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 369 RQRPPFKAPAKLYARGL--KELIEECWNEKPAKRPTF-----RQIITRLESINNSINHK- 420
AK + R L KE + ++ + P +Q + R ES+ N N K
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLENFKK 299
Query: 421 ----RRWKVYLFLSLSVCLHL 437
RRWK+ F +S+C HL
Sbjct: 300 QYVRRRWKLS-FSIVSLCNHL 319
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 37 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 96
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 97 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 153
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 154 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A+K L + I +++V E ++ ++ HP V+ + Y G+
Sbjct: 62 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 121
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
L ++++ G+ + + +I + YLH IIHRDL+P NIL ++ ++++ D
Sbjct: 122 LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITD 178
Query: 297 FGVSKLLT--VKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
FG +K+L+ K+ R T+ +YV+PE+ + D+++ I+ +++ G PPF
Sbjct: 179 FGTAKVLSPESKQARANXFVGTA-QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 119/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 45 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 101
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 102 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 158
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG +KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 159 TDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 218
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 219 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 275
Query: 413 I 413
+
Sbjct: 276 M 276
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 119/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 46 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 102
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 103 XLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 159
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 160 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 219
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 220 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 276
Query: 413 I 413
+
Sbjct: 277 M 277
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 119/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++T+ +P G
Sbjct: 52 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFG 108
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 109 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 165
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG +KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 166 TDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 225
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 226 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 282
Query: 413 I 413
+
Sbjct: 283 M 283
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 104/232 (44%), Gaps = 41/232 (17%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFR-DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLP 233
G Q AVKK+ R+ FR +EL + P +V GAV + + I E L
Sbjct: 118 GFQCAVKKV---------RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLE 168
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI-LRDDSGNL 292
G L +K +G L A+ + G+ YLH + I+H D++ N+ L D +
Sbjct: 169 GGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHA 225
Query: 293 KVADF---------GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 343
+ DF G+ K L + P T +T ++APEV D KVDV+S +
Sbjct: 226 ALCDFGHAVCLQPDGLGKSLLTGDYIPGT--ET---HMAPEVVLGRSCDAKVDVWSSCCM 280
Query: 344 LQEMIEGCPPFT--------MKHDNEVPKAYAARQRPPFKAPAKLYARGLKE 387
+ M+ GC P+T +K +E P R+ PP AP L A+ ++E
Sbjct: 281 MLHMLNGCHPWTQFFRGPLCLKIASEPPP---VREIPPSCAP--LTAQAIQE 327
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 156 DFTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHP 210
+F +I +GT+ + + G VA+KK+ + ++ A R E++LL+++ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 211 NVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALK-PSTAVR-FALDIARGMNYLHE 268
N+V+ L + + + +V E++ + DL+ F+ P ++ + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN 328
++ ++HRDL+P N+L + G +K+ADFG+++ V R + + Y APE+
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 180
Query: 329 -EEYDTKVDVFSFALILQEMI 348
+ Y T VD++S I EM+
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMV 201
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKSQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+ + D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 SELKILDFGLCR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 15/186 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKXQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 XELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EGCPPF 354
G F
Sbjct: 218 TGRTLF 223
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 108 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 163
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 164 SELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 349 EG 350
G
Sbjct: 220 TG 221
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKXQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 112 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 167
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 168 SELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 349 EG 350
G
Sbjct: 224 TG 225
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 119/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 47 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 103
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 104 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 160
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 161 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 220
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 221 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 277
Query: 413 I 413
+
Sbjct: 278 M 278
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 119/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 48 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 104
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 105 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 161
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 162 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 221
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 222 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 278
Query: 413 I 413
+
Sbjct: 279 M 279
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 119/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 45 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 101
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 102 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 158
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 159 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 218
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 219 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 275
Query: 413 I 413
+
Sbjct: 276 M 276
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 119/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 46 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 102
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 103 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 159
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 160 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 219
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 220 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 276
Query: 413 I 413
+
Sbjct: 277 M 277
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 25/195 (12%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKI---RHPNVVQF------LGAVTQSSPM 225
G+ VA+KK + D R R EL ++Q + HPN+VQ LG +
Sbjct: 48 GMSVAIKK-----VIQDPRFR--NRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIY 100
Query: 226 M-IVTEYLPKG---DLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEP 281
+ +V EY+P R + +R+ A P F + R + LH V + HRD++P
Sbjct: 101 LNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS-VNVCHRDIKP 159
Query: 282 SNILRDDS-GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPE-VFKNEEYDTKVDVFS 339
N+L +++ G LK+ DFG +K L+ E P S Y APE +F N+ Y T VD++S
Sbjct: 160 HNVLVNEADGTLKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWS 217
Query: 340 FALILQEMIEGCPPF 354
I EM+ G P F
Sbjct: 218 VGCIFAEMMLGEPIF 232
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 116/236 (49%), Gaps = 12/236 (5%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K L E ++ DE ++ + P V + LG + +S + +VT+ +P G
Sbjct: 47 IPVAIKVLRENTSPKANK--EILDEAYVMAGVGSPYVSRLLG-ICLTSTVQLVTQLMPYG 103
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L ++ +G L + + + IA+GM+YL + V ++HRDL N+L ++K+
Sbjct: 104 CLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED---VRLVHRDLAARNVLVKSPNHVKI 160
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG+++LL + E + +++A E + + DV+S+ + + E++ G
Sbjct: 161 TDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAK 220
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIIT 408
P+ E+P +R P + P + + ++ +CW RP FR++++
Sbjct: 221 PYDGIPAREIPDLLEKGERLP-QPP--ICTIDVYMIMVKCWMIDSECRPRFRELVS 273
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 119/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 52 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 108
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 109 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 165
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 166 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 225
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 226 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 282
Query: 413 I 413
+
Sbjct: 283 M 283
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 104/232 (44%), Gaps = 41/232 (17%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFR-DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLP 233
G Q AVKK+ R+ FR +EL + P +V GAV + + I E L
Sbjct: 99 GFQCAVKKV---------RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLE 149
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI-LRDDSGNL 292
G L +K +G L A+ + G+ YLH + I+H D++ N+ L D +
Sbjct: 150 GGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHA 206
Query: 293 KVADF---------GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 343
+ DF G+ K L + P T +T ++APEV D KVDV+S +
Sbjct: 207 ALCDFGHAVCLQPDGLGKDLLTGDYIPGT--ET---HMAPEVVLGRSCDAKVDVWSSCCM 261
Query: 344 LQEMIEGCPPFT--------MKHDNEVPKAYAARQRPPFKAPAKLYARGLKE 387
+ M+ GC P+T +K +E P R+ PP AP L A+ ++E
Sbjct: 262 MLHMLNGCHPWTQFFRGPLCLKIASEPPP---VREIPPSCAP--LTAQAIQE 308
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 119/241 (49%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 49 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 105
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 106 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 162
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG++KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 163 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 222
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 223 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 279
Query: 413 I 413
+
Sbjct: 280 M 280
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 162 EITKGTFILA-FWRGIQ----VAVKKL--GEEVISDDDRVRAFRDELALLQKIRHPNVVQ 214
+I G F +A R Q VAVK + GE++ D+ V+ E+ + +RHPN+V+
Sbjct: 26 DIGSGNFGVARLMRDKQSNELVAVKYIERGEKI---DENVKR---EIINHRSLRHPNIVR 79
Query: 215 FLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPI 274
F + + + IV EY G+L + G A F + G++Y H + +
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---V 136
Query: 275 IHRDLEPSNILRDDS--GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYD 332
HRDL+ N L D S LK+ FG SK +V +P + T Y+APEV +EYD
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSK-SSVLHSQPKSTVGTPA-YIAPEVLLKKEYD 194
Query: 333 TKV-DVFSFALILQEMIEGCPPFTMKHDNEVPKAY 366
KV DV+S + L M+ G PF D E PK +
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPF---EDPEEPKNF 226
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 15/184 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY----- 231
+VAVKKL S R +R EL LL+ ++H NV+ L T ++ + +E
Sbjct: 55 KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
L DL +K + AL + RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 114 LMGADLNNIVKCQ-ALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSE 169
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMIEG 350
L++ DFG+++ + D +T + Y APE+ N Y+ VD++S I+ E+++G
Sbjct: 170 LRILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 351 CPPF 354
F
Sbjct: 226 KALF 229
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 200 ELALLQKIR-HPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALD 258
E+ +L+K+ HPN++Q ++ +V + + KG+L +L K L +
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 259 IARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC 318
+ + LH+ + I+HRDL+P NIL DD N+K+ DFG S L E C S
Sbjct: 133 LLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPS- 188
Query: 319 RYVAPEVFK------NEEYDTKVDVFSFALILQEMIEGCPPF 354
Y+APE+ + + Y +VD++S +I+ ++ G PPF
Sbjct: 189 -YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL + S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 59 GLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 117
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 118 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 173
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 174 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 349 EG 350
G
Sbjct: 230 TG 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 112 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 167
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 168 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 349 EG 350
G
Sbjct: 224 TG 225
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 109/212 (51%), Gaps = 10/212 (4%)
Query: 199 DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK-RKGALKPSTAVRFAL 257
DE ++ + +P+V + LG + +S + ++T+ +P G L +++ K + + + +
Sbjct: 100 DEAYVMASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 158
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKE-DRPLTCQDT 316
IA+GMNYL + + ++HRDL N+L ++K+ DFG++KLL +E +
Sbjct: 159 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 215
Query: 317 SCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPFTMKHDNEVPKAYAARQRPPFK 375
+++A E + Y + DV+S+ + + E++ G P+ +E+ +R P +
Sbjct: 216 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP-Q 274
Query: 376 APAKLYARGLKELIEECWNEKPAKRPTFRQII 407
P + + ++ +CW RP FR++I
Sbjct: 275 PP--ICTIDVYMIMVKCWMIDADSRPKFRELI 304
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 43 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 102 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 157
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 158 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 349 EG 350
G
Sbjct: 214 TG 215
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDFGLAR----HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNE-EYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 45 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 103
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 104 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 159
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 160 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 215
Query: 349 EG 350
G
Sbjct: 216 TG 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 102
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 103 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 158
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 159 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 214
Query: 349 EG 350
G
Sbjct: 215 TG 216
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 111 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 166
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 167 XELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 349 EG 350
G
Sbjct: 223 TG 224
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 200 ELALLQKIR-HPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALD 258
E+ +L+K+ HPN++Q ++ +V + + KG+L +L K L +
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 259 IARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC 318
+ + LH+ + I+HRDL+P NIL DD N+K+ DFG S L E C S
Sbjct: 120 LLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS- 175
Query: 319 RYVAPEVFK------NEEYDTKVDVFSFALILQEMIEGCPPF 354
Y+APE+ + + Y +VD++S +I+ ++ G PPF
Sbjct: 176 -YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 112 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 167
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 168 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 349 EG 350
G
Sbjct: 224 TG 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 200 ELALLQKIR-HPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALD 258
E+ +L+K+ HPN++Q ++ +V + + KG+L +L K L +
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 259 IARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSC 318
+ + LH+ + I+HRDL+P NIL DD N+K+ DFG S L E C S
Sbjct: 133 LLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS- 188
Query: 319 RYVAPEVFK------NEEYDTKVDVFSFALILQEMIEGCPPF 354
Y+APE+ + + Y +VD++S +I+ ++ G PPF
Sbjct: 189 -YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 102
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 103 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 158
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 159 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 214
Query: 349 EG 350
G
Sbjct: 215 TG 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 111 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 166
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 167 XELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 349 EG 350
G
Sbjct: 223 TG 224
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 200 ELALLQKIR---HPNVVQFLGAVTQSSP-----MMIVTEYLPKGDLRAFLKRKG--ALKP 249
E+ALL+++ HPNVV+ + S + +V E++ + DLR +L + L
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 119
Query: 250 STAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDR 309
T RG+++LH N I+HRDL+P NIL G +K+ADFG++++ + +
Sbjct: 120 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ--M 174
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
LT + Y APEV Y T VD++S I EM P F
Sbjct: 175 ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 111 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 166
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 167 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 349 EG 350
G
Sbjct: 223 TG 224
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 108 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 163
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 164 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 349 EG 350
G
Sbjct: 220 TG 221
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 128
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 129 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 184
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 185 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 240
Query: 349 EG 350
G
Sbjct: 241 TG 242
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 67 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 126 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 181
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 182 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
Query: 349 EG 350
G
Sbjct: 238 TG 239
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 113 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 168
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 169 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 349 EG 350
G
Sbjct: 225 TG 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 111 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 166
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 167 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 349 EG 350
G
Sbjct: 223 TG 224
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 46 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 104
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 105 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 160
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 161 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 216
Query: 349 EG 350
G
Sbjct: 217 TG 218
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 108 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 163
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 164 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 349 EG 350
G
Sbjct: 220 TG 221
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 116
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 117 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 172
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 173 XELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 228
Query: 349 EG 350
G
Sbjct: 229 TG 230
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 117
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 118 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 173
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 174 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 349 EG 350
G
Sbjct: 230 TG 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 117
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 118 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 173
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 174 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 349 EG 350
G
Sbjct: 230 TG 231
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 66 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 124
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 125 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 180
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 181 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 236
Query: 349 EG 350
G
Sbjct: 237 TG 238
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 108 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 163
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 164 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 349 EG 350
G
Sbjct: 220 TG 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 116
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 117 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 172
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 173 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 228
Query: 349 EG 350
G
Sbjct: 229 TG 230
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 118/241 (48%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 47 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 103
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 104 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 160
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG +KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 161 TDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 220
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 221 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK 277
Query: 413 I 413
+
Sbjct: 278 M 278
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 89/190 (46%), Gaps = 23/190 (12%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
GI VAVKKL + RA+R EL LL+ + H N++ L T P + E+
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFT---PQKTLEEF--- 101
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNI 284
D+ ++ A + LD R G+ +LH IIHRDL+PSNI
Sbjct: 102 QDVYLVMELMDA-NLCQVIHMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNI 157
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
+ LK+ DFG+++ T + +T + Y APEV Y VD++S I+
Sbjct: 158 VVKSDCTLKILDFGLAR--TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIM 215
Query: 345 QEMIEGCPPF 354
E+++GC F
Sbjct: 216 GELVKGCVIF 225
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 163 ITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQKIRHPNVVQFLGA 218
I KG F + WRG +VAVK + S + FR+ E+ +RH N++ F+ A
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVK-----IFSSREERSWFREAEIYQTVMLRHENILGFIAA 71
Query: 219 VTQS----SPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH------E 268
+ + + +V++Y G L +L R + ++ AL A G+ +LH +
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT-------SCRYV 321
KP I HRDL+ NIL +G +AD G L V+ D D + RY+
Sbjct: 131 GKP-AIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYM 185
Query: 322 APEVF------KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFK 375
APEV K+ E + D+++ L+ E+ C + D ++P P +
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 245
Query: 376 APAKLYA------------------RGLKELIEECWNEKPAKRPTFRQIITRLESINN 415
K+ R + +++ ECW A R T +I L ++
Sbjct: 246 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 303
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 163 ITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQKIRHPNVVQFLGA 218
I KG F + WRG +VAVK + S + FR+ E+ +RH N++ F+ A
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVK-----IFSSREERSWFREAEIYQTVMLRHENILGFIAA 91
Query: 219 VTQS----SPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH------E 268
+ + + +V++Y G L +L R + ++ AL A G+ +LH +
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT-------SCRYV 321
KP I HRDL+ NIL +G +AD G L V+ D D + RY+
Sbjct: 151 GKP-AIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYM 205
Query: 322 APEVF------KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFK 375
APEV K+ E + D+++ L+ E+ C + D ++P P +
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 265
Query: 376 APAKLYA------------------RGLKELIEECWNEKPAKRPTFRQIITRLESINN 415
K+ R + +++ ECW A R T +I L ++
Sbjct: 266 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 323
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 163 ITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQKIRHPNVVQFLGA 218
I KG F + WRG +VAVK + S + FR+ E+ +RH N++ F+ A
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVK-----IFSSREERSWFREAEIYQTVMLRHENILGFIAA 65
Query: 219 VTQS----SPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH------E 268
+ + + +V++Y G L +L R + ++ AL A G+ +LH +
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT-------SCRYV 321
KP I HRDL+ NIL +G +AD G L V+ D D + RY+
Sbjct: 125 GKP-AIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYM 179
Query: 322 APEVF------KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFK 375
APEV K+ E + D+++ L+ E+ C + D ++P P +
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239
Query: 376 APAKLYA------------------RGLKELIEECWNEKPAKRPTFRQIITRLESINN 415
K+ R + +++ ECW A R T +I L ++
Sbjct: 240 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 125/298 (41%), Gaps = 56/298 (18%)
Query: 163 ITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQKIRHPNVVQFLGA 218
I KG F + WRG +VAVK + S + FR+ E+ +RH N++ F+ A
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVK-----IFSSREERSWFREAEIYQTVMLRHENILGFIAA 68
Query: 219 VTQS----SPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH------E 268
+ + + +V++Y G L +L R + ++ AL A G+ +LH +
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT-------SCRYV 321
KP I HRDL+ NIL +G +AD G L V+ D D + RY+
Sbjct: 128 GKP-AIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYM 182
Query: 322 APEVF------KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVP------------ 363
APEV K+ E + D+++ L+ E+ C + D ++P
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 242
Query: 364 --KAYAARQRPPFKAPAKLYA----RGLKELIEECWNEKPAKRPTFRQIITRLESINN 415
+ Q+ P + + R + +++ ECW A R T +I L ++
Sbjct: 243 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 300
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 163 ITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQKIRHPNVVQFLGA 218
I KG F + WRG +VAVK + S + FR+ E+ +RH N++ F+ A
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVK-----IFSSREERSWFREAEIYQTVMLRHENILGFIAA 66
Query: 219 VTQS----SPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH------E 268
+ + + +V++Y G L +L R + ++ AL A G+ +LH +
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT-------SCRYV 321
KP I HRDL+ NIL +G +AD G L V+ D D + RY+
Sbjct: 126 GKP-AIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYM 180
Query: 322 APEVF------KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFK 375
APEV K+ E + D+++ L+ E+ C + D ++P P +
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 240
Query: 376 APAKLYA------------------RGLKELIEECWNEKPAKRPTFRQIITRLESINN 415
K+ R + +++ ECW A R T +I L ++
Sbjct: 241 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 298
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 15/184 (8%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY----- 231
+VAVKKL S R +R EL LL+ ++H NV+ L T ++ + +E
Sbjct: 47 KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 105
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
L DL +K + AL + RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 LMGADLNNIVKCQ-ALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCE 161
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMIEG 350
L++ DFG+++ + D +T + Y APE+ N Y+ VD++S I+ E+++G
Sbjct: 162 LRILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 217
Query: 351 CPPF 354
F
Sbjct: 218 KALF 221
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 28/192 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFR-DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLP 233
G Q AVKK+ R+ FR +EL + P +V GAV + + I E L
Sbjct: 83 GFQCAVKKV---------RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 133
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI-LRDDSGNL 292
G L +K+ G L A+ + G+ YLH + I+H D++ N+ L D
Sbjct: 134 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRA 190
Query: 293 KVADF---------GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 343
+ DF G+ K L + P T +T ++APEV + D KVD++S +
Sbjct: 191 ALCDFGHALCLQPDGLGKSLLTGDYIPGT--ET---HMAPEVVMGKPCDAKVDIWSSCCM 245
Query: 344 LQEMIEGCPPFT 355
+ M+ GC P+T
Sbjct: 246 MLHMLNGCHPWT 257
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 162 EITKGTFILA-FWRGIQ----VAVKKL--GEEVISDDDRVRAFRDELALLQKIRHPNVVQ 214
+I G F +A R Q VAVK + GE++ D+ V+ E+ + +RHPN+V+
Sbjct: 26 DIGSGNFGVARLMRDKQSNELVAVKYIERGEKI---DENVKR---EIINHRSLRHPNIVR 79
Query: 215 FLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPI 274
F + + + IV EY G+L + G A F + G++Y H + +
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---V 136
Query: 275 IHRDLEPSNILRDDS--GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYD 332
HRDL+ N L D S LK+ FG SK +V +P T Y+APEV +EYD
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSK-SSVLHSQPKDTVGTPA-YIAPEVLLKKEYD 194
Query: 333 TKV-DVFSFALILQEMIEGCPPFTMKHDNEVPKAY 366
KV DV+S + L M+ G PF D E PK +
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPF---EDPEEPKNF 226
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 28/192 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFR-DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLP 233
G Q AVKK+ R+ FR +EL + P +V GAV + + I E L
Sbjct: 97 GFQCAVKKV---------RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 147
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI-LRDDSGNL 292
G L +K+ G L A+ + G+ YLH + I+H D++ N+ L D
Sbjct: 148 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRA 204
Query: 293 KVADF---------GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 343
+ DF G+ K L + P T +T ++APEV + D KVD++S +
Sbjct: 205 ALCDFGHALCLQPDGLGKSLLTGDYIPGT--ET---HMAPEVVMGKPCDAKVDIWSSCCM 259
Query: 344 LQEMIEGCPPFT 355
+ M+ GC P+T
Sbjct: 260 MLHMLNGCHPWT 271
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 28/192 (14%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFR-DELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLP 233
G Q AVKK+ R+ FR +EL + P +V GAV + + I E L
Sbjct: 99 GFQCAVKKV---------RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 149
Query: 234 KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI-LRDDSGNL 292
G L +K+ G L A+ + G+ YLH + I+H D++ N+ L D
Sbjct: 150 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRA 206
Query: 293 KVADF---------GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALI 343
+ DF G+ K L + P T +T ++APEV + D KVD++S +
Sbjct: 207 ALCDFGHALCLQPDGLGKSLLTGDYIPGT--ET---HMAPEVVMGKPCDAKVDIWSSCCM 261
Query: 344 LQEMIEGCPPFT 355
+ M+ GC P+T
Sbjct: 262 MLHMLNGCHPWT 273
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 163 ITKGTFILAF---WRGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQKIRHPNVVQFLGA 218
I KG F + WRG +VAVK + S + FR+ E+ +RH N++ F+ A
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVK-----IFSSREERSWFREAEIYQTVMLRHENILGFIAA 104
Query: 219 VTQS----SPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLH------E 268
+ + + +V++Y G L +L R + ++ AL A G+ +LH +
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 269 NKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT-------SCRYV 321
KP I HRDL+ NIL +G +AD G L V+ D D + RY+
Sbjct: 164 GKPA-IAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYM 218
Query: 322 APEVF------KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFK 375
APEV K+ E + D+++ L+ E+ C + D ++P P +
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 278
Query: 376 APAKLYA------------------RGLKELIEECWNEKPAKRPTFRQIITRLESINN 415
K+ R + +++ ECW A R T +I L ++
Sbjct: 279 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 118/241 (48%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 49 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 105
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 106 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 162
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG +KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 163 TDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 222
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 223 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 279
Query: 413 I 413
+
Sbjct: 280 M 280
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 118/241 (48%), Gaps = 12/241 (4%)
Query: 176 IQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKG 235
I VA+K+L E ++ DE ++ + +P+V + LG + +S + ++ + +P G
Sbjct: 47 IPVAIKELREATSPKANK--EILDEAYVMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFG 103
Query: 236 DLRAFLK-RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
L +++ K + + + + IA+GMNYL + + ++HRDL N+L ++K+
Sbjct: 104 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKI 160
Query: 295 ADFGVSKLLTVKE-DRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCP 352
DFG +KLL +E + +++A E + Y + DV+S+ + + E++ G
Sbjct: 161 TDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 220
Query: 353 PFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLES 412
P+ +E+ +R P + P + + ++ +CW RP FR++I
Sbjct: 221 PYDGIPASEISSILEKGERLP-QPP--ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 277
Query: 413 I 413
+
Sbjct: 278 M 278
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ D+G+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDYGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 17/183 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFAL-DIARGMNYLHENKPVPIIHRDLEPSNILRDD 288
+L DL +K A V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 102 THLMGADLNNIVK--CAKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 156
Query: 289 SGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEM 347
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E+
Sbjct: 157 DCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 348 IEG 350
+ G
Sbjct: 213 LTG 215
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 40/255 (15%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSP----MMIVTEYLPKGDLRAFLKRKGALKPSTAVRF 255
E+ L ++H N++QF+GA + + + ++T + KG L FLK + +
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-VVSWNELCHI 126
Query: 256 ALDIARGMNYLHENKPV-------PIIHRDLEPSNILRDDSGNLKVADFGVS-KLLTVKE 307
A +ARG+ YLHE+ P I HRD++ N+L ++ +ADFG++ K K
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186
Query: 308 DRPLTCQDTSCRYVAPEVFK---NEEYDT--KVDVFSFALILQEMIEGCPP-------FT 355
Q + RY+APEV + N + D ++D+++ L+L E+ C +
Sbjct: 187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYM 246
Query: 356 MKHDNEVPK----------AYAARQRPPFKAPAKLYA--RGLKELIEECWNEKPAKRPTF 403
+ + E+ + ++RP + + +A L E IEECW+ R +
Sbjct: 247 LPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSA 306
Query: 404 RQI---ITRLESINN 415
+ IT+++ + N
Sbjct: 307 GCVGERITQMQRLTN 321
>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264.
pdb|4GPM|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264
Length = 169
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 24 KEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQ 83
K A++N D DG L A E +K L+ G DVN +D D RT LH AA
Sbjct: 59 KGADVNAKDSDGR-----TPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAEN 113
Query: 84 GFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
G EVV LL+ +GADV+ D G TPL A + N EV+KLLEK G
Sbjct: 114 GHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 43 RLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPK 102
RL+ A + + +K+L+++G DVN D D RT LH AA G EVV LL+ +GADV+ K
Sbjct: 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAK 66
Query: 103 DRWGSTPLGDAIYYKNHEVIKLLEKHGA------KPLMAPMHVKHAREVPEYEI 150
D G TPL A + EV+KLL GA P+H HA E E+
Sbjct: 67 DSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLH--HAAENGHKEV 118
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N D DG L A E +K L+ G DVN +D D RT LH AA G
Sbjct: 28 ADVNASDSDGR-----TPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGH 82
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
EVV LL+ +GADV+ KD G TPL A + EV+KLL GA
Sbjct: 83 KEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA 127
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 29/261 (11%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+++L+++ H NV+ + ++++ E + G+L FL +K +L A F I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSG----NLKVADFGVSKLLTVKEDRPLTCQD 315
G+NYLH K I H DL+P NI+ D ++K+ DFG++ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIF 179
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF-------TMKHDNEVPKAYAA 368
+ +VAPE+ E + D++S +I ++ G PF T+ + V +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 369 RQRPPFKAPAKLYARGL--KELIEECWNEKPAKRPTF-----RQIITRLESINNSINH-- 419
AK + R L KE + ++ + P +Q + R ES+ N N
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRK 299
Query: 420 ---KRRWKVYLFLSLSVCLHL 437
+RRWK+ F +S+C HL
Sbjct: 300 QYVRRRWKLS-FSIVSLCNHL 319
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 53 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 112 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 167
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 168 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 349 EG 350
G
Sbjct: 224 TG 225
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 200 ELALLQKIR---HPNVVQFLGAVTQSSP-----MMIVTEYLPKGDLRAFLKRKG--ALKP 249
E+ALL+++ HPNVV+ + S + +V E++ + DLR +L + L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 250 STAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDR 309
T RG+++LH N I+HRDL+P NIL G +K+ADFG++++ + +
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ--M 166
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
L + Y APEV Y T VD++S I EM P F
Sbjct: 167 ALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 102 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 157
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 158 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 349 EG 350
G
Sbjct: 214 TG 215
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 106/228 (46%), Gaps = 23/228 (10%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY--- 231
G +VA+KKL S+ RA+R EL LL+ +RH NV+ L T + T++
Sbjct: 50 GAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108
Query: 232 LP--KGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+P DL +K + L + +G+ Y+H IIHRDL+P N+ ++
Sbjct: 109 MPFMGTDLGKLMKHE-KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNED 164
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ + D + + Y APEV N Y VD++S I+ EMI
Sbjct: 165 CELKILDFGLAR----QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMI 220
Query: 349 EGCPPFTMK-HDNEVPKAYAARQRPPFK-------APAKLYARGLKEL 388
G F H +++ + PP + AK Y +GL EL
Sbjct: 221 TGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL 268
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 57 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 115
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 116 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 171
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 172 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 227
Query: 349 EG 350
G
Sbjct: 228 TG 229
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 126 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 181
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 182 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
Query: 349 EG 350
G
Sbjct: 238 TG 239
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 66 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 124
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 125 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 180
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 181 CELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 236
Query: 349 EG 350
G
Sbjct: 237 TG 238
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 29/261 (11%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+++L+++ H NV+ + ++++ E + G+L FL +K +L A F I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSG----NLKVADFGVSKLLTVKEDRPLTCQD 315
G+NYLH K I H DL+P NI+ D ++K+ DFG++ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIF 179
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF-------TMKHDNEVPKAYAA 368
+ +VAPE+ E + D++S +I ++ G PF T+ + V +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 369 RQRPPFKAPAKLYARGL--KELIEECWNEKPAKRPTF-----RQIITRLESINNSINH-- 419
AK + R L KE + ++ + P +Q + R ES+ N N
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRK 299
Query: 420 ---KRRWKVYLFLSLSVCLHL 437
+RRWK+ F +S+C HL
Sbjct: 300 QYVRRRWKLD-FSIVSLCNHL 319
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 102
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + +VT +L DL LK + L F I RG+ Y+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVT-HLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 160
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 161 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 200 ELALLQKIR---HPNVVQFLGAVTQSSP-----MMIVTEYLPKGDLRAFLKRKG--ALKP 249
E+ALL+++ HPNVV+ + S + +V E++ + DLR +L + L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 250 STAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDR 309
T RG+++LH N I+HRDL+P NIL G +K+ADFG++++ + +
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ--M 166
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
L + Y APEV Y T VD++S I EM P F
Sbjct: 167 ALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL-RAFLKRKGA---LKPSTA 252
+ E ++ ++HP++V+ L + + +V E++ DL +KR A + A
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 253 VRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGNLKVADFGVSKLLTVKEDR 309
+ I + Y H+N IIHRD++P N+L +++S +K+ DFGV+ L +
Sbjct: 133 SHYMRQILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG-ESGL 188
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
+ + ++APEV K E Y VDV+ +IL ++ GC PF
Sbjct: 189 VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 13/192 (6%)
Query: 174 RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMI----VT 229
R +VA+KK+ + E+ +L + RH NV+ + S+ + +
Sbjct: 67 RKTRVAIKKISP--FEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIV 124
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+ L + DL LK + L F I RG+ Y+H ++HRDL+PSN+L + +
Sbjct: 125 QDLMETDLYKLLKSQ-QLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLINTT 180
Query: 290 GNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQE 346
+LK+ DFG++++ + D LT + Y APE+ N + Y +D++S IL E
Sbjct: 181 CDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 240
Query: 347 MIEGCPPFTMKH 358
M+ P F KH
Sbjct: 241 MLSNRPIFPGKH 252
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 128
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 129 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 184
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D + + Y APE+ N Y+ VD++S I+ E++
Sbjct: 185 CELKILDFGLAR----HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 240
Query: 349 EG 350
G
Sbjct: 241 TG 242
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 209 HPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHE 268
HPN+V+ +V E L G+L +K+K + A + ++++H+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 269 NKPVPIIHRDLEPSNIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEV 325
V ++HRDL+P N+L +D+ +K+ DFG ++L +++PL + Y APE+
Sbjct: 125 ---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL-KPPDNQPLKTPCFTLHYAAPEL 180
Query: 326 FKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD 359
YD D++S +IL M+ G PF HD
Sbjct: 181 LNQNGYDESCDLWSLGVILYTMLSGQVPF-QSHD 213
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 113 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 168
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ T E +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 169 CELKILDFGLAR-HTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 349 EG 350
G
Sbjct: 225 TG 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 113 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 168
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ T E +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 169 CELKILDFGLAR-HTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 349 EG 350
G
Sbjct: 225 TG 226
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 200 ELALLQKIR---HPNVVQFLGAVTQSSP-----MMIVTEYLPKGDLRAFLKRKG--ALKP 249
E+ALL+++ HPNVV+ + S + +V E++ + DLR +L + L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 250 STAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDR 309
T RG+++LH N I+HRDL+P NIL G +K+ADFG++++ + +
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ--M 166
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
L + Y APEV Y T VD++S I EM P F
Sbjct: 167 ALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 15/186 (8%)
Query: 182 KLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFL 241
K + IS + F++EL ++ I++ + G +T + I+ EY+ + F
Sbjct: 75 KSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFD 134
Query: 242 -------KRKGALKPSTAVRFAL-DIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLK 293
K P ++ + + +Y+H K I HRD++PSNIL D +G +K
Sbjct: 135 EYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVK 192
Query: 294 VADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNE-EYD-TKVDVFSFALILQEMIEGC 351
++DFG S+ + D+ + + ++ PE F NE Y+ KVD++S + L M
Sbjct: 193 LSDFGESEYMV---DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249
Query: 352 PPFTMK 357
PF++K
Sbjct: 250 VPFSLK 255
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 17/183 (9%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFAL-DIARGMNYLHENKPVPIIHRDLEPSNILRDD 288
+L DL +K + V+F + I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 113 THLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 167
Query: 289 SGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T E +T + Y APE+ N Y+ VD++S I+ E+
Sbjct: 168 DCELKILDFGLAR-HTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 348 IEG 350
+ G
Sbjct: 224 LTG 226
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 133/292 (45%), Gaps = 40/292 (13%)
Query: 134 MAPMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEE 186
MAP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 21 MAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKD 79
Query: 187 VISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDL 237
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 80 RISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDL 136
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVAD 296
F+ +GAL+ A F + + + H ++HRD++ NIL D + G LK+ D
Sbjct: 137 FDFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLID 193
Query: 297 FGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFT 355
FG LL +D T D + Y PE + Y + V+S ++L +M+ G PF
Sbjct: 194 FGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 249
Query: 356 MKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+HD E+ + RQR + + LI C +P+ RPTF +I
Sbjct: 250 -EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 291
>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266.
pdb|4GMR|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266
Length = 169
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 55/90 (61%)
Query: 43 RLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPK 102
RL+ A + + +K+LL++G DVN D D +T LH+AA G EVV LLL +GAD + K
Sbjct: 7 RLIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAK 66
Query: 103 DRWGSTPLGDAIYYKNHEVIKLLEKHGAKP 132
D G TPL A + EV+KLL GA P
Sbjct: 67 DSDGKTPLHLAAENGHKEVVKLLLSQGADP 96
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 55/101 (54%)
Query: 30 GLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVV 89
G D + ++ + L A E +K LL G D N +D D +T LH+AA G EVV
Sbjct: 60 GADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVV 119
Query: 90 SLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
LLL +GAD + D G TPL A + N EV+KLLEK G
Sbjct: 120 KLLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N D DG+ L A E +K LL G D N +D D +T LH+AA G
Sbjct: 28 ADVNASDSDGK-----TPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGH 82
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGAKP 132
EVV LLL +GAD + KD G TPL A + EV+KLL GA P
Sbjct: 83 KEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADP 129
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 166 GTFILAFWRGIQV--AVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS 223
G +A +G ++ A KK+ + + D DR F+ E+ +++ + HPN+++ ++
Sbjct: 23 GEVKIAVQKGTRIRRAAKKIPKYFVEDVDR---FKQEIEIMKSLDHPNIIRLYETFEDNT 79
Query: 224 PMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSN 283
+ +V E G+L + K + S A R D+ + Y H+ + + HRDL+P N
Sbjct: 80 DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPEN 136
Query: 284 IL-RDDSGN--LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 340
L DS + LK+ DFG++ K + + + + YV+P+V + Y + D +S
Sbjct: 137 FLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSA 193
Query: 341 ALILQEMIEGCPPFTMKHDNEV 362
+++ ++ G PPF+ D EV
Sbjct: 194 GVMMYVLLCGYPPFSAPTDXEV 215
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ FG+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILGFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four
Identical Consensus Repeats
Length = 126
Score = 73.6 bits (179), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N D +G L A +E +K LL++G DVN +D + RT LH+AA G
Sbjct: 26 ADVNAKDKNGRT-----PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
EVV LLLE GADV+ KD+ G TPL A + EV+KLL + GA
Sbjct: 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125
Score = 72.0 bits (175), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/87 (49%), Positives = 55/87 (63%)
Query: 44 LMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKD 103
L A +E +K LL++G DVN +D + RT LH+AA G EVV LLLE GADV+ KD
Sbjct: 6 LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65
Query: 104 RWGSTPLGDAIYYKNHEVIKLLEKHGA 130
+ G TPL A + EV+KLL + GA
Sbjct: 66 KNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 55.5 bits (132), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 72 DNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
+ RT LH+AA G EVV LLLE GADV+ KD+ G TPL A + EV+KLL + GA
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 166 GTFILAFWRGIQV--AVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSS 223
G +A +G ++ A KK+ + + D DR F+ E+ +++ + HPN+++ ++
Sbjct: 40 GEVKIAVQKGTRIRRAAKKIPKYFVEDVDR---FKQEIEIMKSLDHPNIIRLYETFEDNT 96
Query: 224 PMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSN 283
+ +V E G+L + K + S A R D+ + Y H+ + + HRDL+P N
Sbjct: 97 DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPEN 153
Query: 284 IL-RDDSGN--LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSF 340
L DS + LK+ DFG++ K + + + + YV+P+V + Y + D +S
Sbjct: 154 FLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSA 210
Query: 341 ALILQEMIEGCPPFTMKHDNEV 362
+++ ++ G PPF+ D EV
Sbjct: 211 GVMMYVLLCGYPPFSAPTDXEV 232
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 162 EITKGTFILAFWRGIQ--VAVKKLGEEVISDDDR---VRAFRDELALLQKIRHPNVVQFL 216
E T GT A R VA+K++ + DDD A R E+ LL++++H N+V+
Sbjct: 12 EGTYGTVFKAKNRETHEIVALKRVR---LDDDDEGVPSSALR-EICLLKELKHKNIVRLH 67
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
+ + +V E+ + + F G L P F + +G+ + H ++H
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLH 124
Query: 277 RDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT---SCRYVAPEV-FKNEEYD 332
RDL+P N+L + +G LK+ADFG+++ + P+ C + Y P+V F + Y
Sbjct: 125 RDLKPQNLLINRNGELKLADFGLARAFGI----PVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 333 TKVDVFSFALILQEMIEGCPPFTMKHD 359
T +D++S I E+ P +D
Sbjct: 181 TSIDMWSAGCIFAELANAARPLFPGND 207
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 80
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 138
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 139 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 42/292 (14%)
Query: 162 EITKGTFILAFWRGIQ------VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQF 215
++ KG + + W+ I VAVKK+ + + D R FR+ + L + H N+V
Sbjct: 16 KLGKGAYGIV-WKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 216 LGAVTQSSP--MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVP 273
L + + + +V +Y+ + DL A + R L+P + + + YLH
Sbjct: 75 LNVLRADNDRDVYLVFDYM-ETDLHAVI-RANILEPVHKQYVVYQLIKVIKYLHSGG--- 129
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSKL------------LTVKE-------DRPLTCQ 314
++HRD++PSNIL + ++KVADFG+S+ L++ E D+P+
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 315 DTSCR-YVAPEV-FKNEEYDTKVDVFSFALILQEMIEGCPPF----TMKHDNEVPKAYAA 368
+ R Y APE+ + +Y +D++S IL E++ G P F TM N++ +
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM---NQLERIIGV 246
Query: 369 RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESINNSINHK 420
P + + + K +IE + ++ R I T+ +++ IN K
Sbjct: 247 IDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPK 298
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 80
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 138
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 139 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 87
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 145
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 146 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 202
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 88
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 146
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 147 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 203
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 204 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 79
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 137
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 138 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 194
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 195 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 86
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 144
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 86
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 144
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLG--EEVISDDDRVRAFRDELALLQKIRH 209
+TN I +G + + ++VA+KK+ E +R E+ +L + RH
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR----EIKILLRFRH 84
Query: 210 PNVVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMN 264
N++ + Q + IV + L + DL LK + L F I RG+
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLK 142
Query: 265 YLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVA 322
Y+H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y A
Sbjct: 143 YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 323 PEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
PE+ N + Y +D++S IL EM+ P F KH
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 12/152 (7%)
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF------AL 257
L RHP++V +G + + M+++ +Y+ G+L+ L G+ P+ ++ + +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY--GSDLPTMSMSWEQRLEICI 146
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLT-VKEDRPLTCQDT 316
ARG++YLH IIHRD++ NIL D++ K+ DFG+SK T + +
Sbjct: 147 GAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 317 SCRYVAPEVFKNEEYDTKVDVFSFALILQEMI 348
+ Y+ PE F K DV+SF ++L E++
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 12/152 (7%)
Query: 204 LQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF------AL 257
L RHP++V +G + + M+++ +Y+ G+L+ L G+ P+ ++ + +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY--GSDLPTMSMSWEQRLEICI 146
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLT-VKEDRPLTCQDT 316
ARG++YLH IIHRD++ NIL D++ K+ DFG+SK T + +
Sbjct: 147 GAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKG 203
Query: 317 SCRYVAPEVFKNEEYDTKVDVFSFALILQEMI 348
+ Y+ PE F K DV+SF ++L E++
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 84
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 142
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 143 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 82
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 140
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 82
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 140
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 16/166 (9%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF- 255
F +E ++ P VVQ A + +V EY+P GDL + P RF
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV--PEKWARFY 178
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 315
++ ++ +H + IHRD++P N+L D SG+LK+ADFG + + ++ + C D
Sbjct: 179 TAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRC-D 232
Query: 316 TSC---RYVAPEVFKNEE----YDTKVDVFSFALILQEMIEGCPPF 354
T+ Y++PEV K++ Y + D +S + L EM+ G PF
Sbjct: 233 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 82
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 140
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 16/166 (9%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF- 255
F +E ++ P VVQ A + +V EY+P GDL + P RF
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV--PEKWARFY 173
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 315
++ ++ +H + IHRD++P N+L D SG+LK+ADFG + + ++ + C D
Sbjct: 174 TAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRC-D 227
Query: 316 TSC---RYVAPEVFKNEE----YDTKVDVFSFALILQEMIEGCPPF 354
T+ Y++PEV K++ Y + D +S + L EM+ G PF
Sbjct: 228 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 90
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 148
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 149 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 205
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 206 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 82
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 140
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 102
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 160
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 161 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 198 RDELALLQKIRH-PNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFA 256
R E +L+ IR P +V A + + ++ +Y+ G+L L ++ +
Sbjct: 106 RTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYV 165
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+I + +LH+ + II+RD++ NIL D +G++ + DFG+SK E
Sbjct: 166 GEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCG 222
Query: 317 SCRYVAPEVFKNEE--YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAAR---QR 371
+ Y+AP++ + + +D VD +S +++ E++ G PFT+ + + R
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE 282
Query: 372 PPFKAPAKLYARGLKELIEECWNEKPAKR 400
PP+ P ++ A K+LI+ + P KR
Sbjct: 283 PPY--PQEMSALA-KDLIQRLLMKDPKKR 308
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ D G+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDAGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRV--RAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYL 232
G VA+KK E SDDD++ + E+ LL+++RH N+V L + +V E++
Sbjct: 50 GRIVAIKKFLE---SDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV 106
Query: 233 PKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNL 292
L L ++ I G+ + H + IIHRD++P NIL SG +
Sbjct: 107 DHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVV 163
Query: 293 KVADFGVSKLLTVKEDRPLTCQDTSCR-YVAPEVFKNE-EYDTKVDVFSFALILQEMIEG 350
K+ DFG ++ L + + + + R Y APE+ + +Y VDV++ ++ EM G
Sbjct: 164 KLCDFGFARTLAAPGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
Query: 351 CPPFTMKHDNEVPKAY 366
P F D+++ + Y
Sbjct: 222 EPLFP--GDSDIDQLY 235
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 86
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKCQ-HLSNDHICYFLYQILRGLKYI 144
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 16/166 (9%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRF- 255
F +E ++ P VVQ A + +V EY+P GDL + P RF
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV--PEKWARFY 178
Query: 256 ALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQD 315
++ ++ +H + IHRD++P N+L D SG+LK+ADFG + + ++ + C D
Sbjct: 179 TAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRC-D 232
Query: 316 TSC---RYVAPEVFKNEE----YDTKVDVFSFALILQEMIEGCPPF 354
T+ Y++PEV K++ Y + D +S + L EM+ G PF
Sbjct: 233 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 200 ELALLQKIRHPNVVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVR 254
E+ +L + RH N++ + Q + IV + L + DL LK + L
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICY 132
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LT 312
F I RG+ Y+H ++HRDL+PSN+L + + +LK+ DFG++++ D LT
Sbjct: 133 FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 313 CQDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 34/278 (12%)
Query: 95 RGADVDPKDRWGSTPLGDAIYYKNHE--VIKLLEKHGAKPLMAPMHVKHAREVPEYEIDP 152
RG DVD + G G N++ V + +++ +P+ +KH + Y+I
Sbjct: 5 RGYDVDEQ---GKIVRGKGTVSSNYDNYVFDIWKQYYPQPV----EIKHDHVLDHYDI-- 55
Query: 153 HELDFTNSVEITKGTF-----ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
HE E+ G F + G A K + SD + VR E+ + +
Sbjct: 56 HE-------ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVL 105
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDL-RAFLKRKGALKPSTAVRFALDIARGMNYL 266
RHP +V A + M+++ E++ G+L + AV + + +G+ ++
Sbjct: 106 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 165
Query: 267 HENKPVPIIHRDLEPSNIL--RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPE 324
HEN +H DL+P NI+ S LK+ DFG++ L K+ +T + + APE
Sbjct: 166 HENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPE 220
Query: 325 VFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
V + + D++S ++ ++ G PF ++D+E
Sbjct: 221 VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET 258
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 15/239 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G++ A K + + +S D + R E + +K++HPN+V+ ++ + S +V + +
Sbjct: 30 GLEFAAKIINTKKLSARDFQKLER-EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 88
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGN 291
G+L + + + A I + Y H N I+HR+L+P N+L +
Sbjct: 89 GELFEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAA 145
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
+K+ADFG++ + V + + Y++PEV K + Y VD+++ +IL ++ G
Sbjct: 146 VKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 203
Query: 352 PPFTMKHDNEVPKAYAARQRPPFKAPAKLY---ARGLKELIEECWNEKPAKRPTFRQII 407
PPF D + + YA + + P+ + K LI+ P KR T Q +
Sbjct: 204 PPFW---DEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 259
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 200 ELALLQKIRHPNVVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVR 254
E+ +L + RH N++ + Q + IV + L + DL LK + L
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICY 128
Query: 255 FALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LT 312
F I RG+ Y+H ++HRDL+PSN+L + + +LK+ DFG++++ D LT
Sbjct: 129 FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 313 CQDTSCRYVAPEVFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ Y APE+ N + Y +D++S IL EM+ P F KH
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 15/239 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G++ A K + + +S D + R E + +K++HPN+V+ ++ + S +V + +
Sbjct: 31 GLEFAAKIINTKKLSARDFQKLER-EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 89
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGN 291
G+L + + + A I + Y H N I+HR+L+P N+L +
Sbjct: 90 GELFEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAA 146
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
+K+ADFG++ + V + + Y++PEV K + Y VD+++ +IL ++ G
Sbjct: 147 VKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 204
Query: 352 PPFTMKHDNEVPKAYAARQRPPFKAPAKLY---ARGLKELIEECWNEKPAKRPTFRQII 407
PPF D + + YA + + P+ + K LI+ P KR T Q +
Sbjct: 205 PPFW---DEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 260
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ D G+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDGGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 34/278 (12%)
Query: 95 RGADVDPKDRWGSTPLGDAIYYKNHE--VIKLLEKHGAKPLMAPMHVKHAREVPEYEIDP 152
RG DVD + G G N++ V + +++ +P+ +KH + Y+I
Sbjct: 111 RGYDVDEQ---GKIVRGKGTVSSNYDNYVFDIWKQYYPQPV----EIKHDHVLDHYDI-- 161
Query: 153 HELDFTNSVEITKGTF-----ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKI 207
HE E+ G F + G A K + SD + VR E+ + +
Sbjct: 162 HE-------ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVL 211
Query: 208 RHPNVVQFLGAVTQSSPMMIVTEYLPKGDL-RAFLKRKGALKPSTAVRFALDIARGMNYL 266
RHP +V A + M+++ E++ G+L + AV + + +G+ ++
Sbjct: 212 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271
Query: 267 HENKPVPIIHRDLEPSNIL--RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPE 324
HEN +H DL+P NI+ S LK+ DFG++ L K+ +T + + APE
Sbjct: 272 HENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPE 326
Query: 325 VFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
V + + D++S ++ ++ G PF ++D+E
Sbjct: 327 VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET 364
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L++IRHPN++ + ++++ E + G+L FL K +L A +F I
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 124
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSG----NLKVADFGVSKLLTVKEDRPLTCQD 315
G++YLH + I H DL+P NI+ D +K+ DFG++ ++
Sbjct: 125 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIF 179
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
+ +VAPE+ E + D++S +I ++ G PF
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 15/239 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G++ A K + + +S D + R E + +K++HPN+V+ ++ + S +V + +
Sbjct: 31 GLEFAAKIINTKKLSARDFQKLER-EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 89
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGN 291
G+L + + + A I + Y H N I+HR+L+P N+L +
Sbjct: 90 GELFEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAA 146
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
+K+ADFG++ + V + + Y++PEV K + Y VD+++ +IL ++ G
Sbjct: 147 VKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 204
Query: 352 PPFTMKHDNEVPKAYAARQRPPFKAPAKLY---ARGLKELIEECWNEKPAKRPTFRQII 407
PPF D + + YA + + P+ + K LI+ P KR T Q +
Sbjct: 205 PPFW---DEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 260
>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three
Identical Consensus Repeats
pdb|1N0Q|B Chain B, 3ank: A Designed Ankyrin Repeat Protein With Three
Identical Consensus Repeats
Length = 93
Score = 72.4 bits (176), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/87 (49%), Positives = 55/87 (63%)
Query: 44 LMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKD 103
L A +E +K LL++G DVN +D + RT LH+AA G EVV LLLE GADV+ KD
Sbjct: 6 LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65
Query: 104 RWGSTPLGDAIYYKNHEVIKLLEKHGA 130
+ G TPL A + EV+KLL + GA
Sbjct: 66 KNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 55.8 bits (133), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 72 DNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
+ RT LH+AA G EVV LLLE GADV+ KD+ G TPL A + EV+KLL + GA
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59
Score = 50.1 bits (118), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N D +G L A +E +K LL++G DVN +D + RT LH+AA G
Sbjct: 26 ADVNAKDKNGRT-----PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80
Query: 86 TEVVSLLLERGA 97
EVV LLLE GA
Sbjct: 81 LEVVKLLLEAGA 92
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L++IRHPN++ + ++++ E + G+L FL K +L A +F I
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 117
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSG----NLKVADFGVSKLLTVKEDRPLTCQD 315
G++YLH + I H DL+P NI+ D +K+ DFG++ ++
Sbjct: 118 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIF 172
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
+ +VAPE+ E + D++S +I ++ G PF
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G++VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ D G+++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDRGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 12/187 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTE-YLP 233
G +VA+KKL S+ RA+R EL LL+ ++H NV+ L T +S + + YL
Sbjct: 49 GEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107
Query: 234 KGDLRAFLKRKGALKPS--TAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
++ L++ LK S + +G+ Y+H ++HRDL+P N+ ++
Sbjct: 108 MPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCE 164
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMIEG 350
LK+ DFG+++ D +T + Y APEV + Y+ VD++S I+ EM+ G
Sbjct: 165 LKILDFGLAR----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 220
Query: 351 CPPFTMK 357
F K
Sbjct: 221 KTLFKGK 227
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L RH N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLAFRHEN 84
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 142
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 143 HSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 108/248 (43%), Gaps = 38/248 (15%)
Query: 176 IQVAVKK------LGEEVISDDDRVRAFRDELALLQKIR----HPNVVQFLGAV-TQSSP 224
+QVA+K LG +SD E+ALL K+ HP V++ L TQ
Sbjct: 57 LQVAIKVIPRNRVLGWSPLSDSVTCPL---EVALLWKVGAGGGHPGVIRLLDWFETQEGF 113
Query: 225 MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNI 284
M+++ LP DL ++ KG L + F + + + H ++HRD++ NI
Sbjct: 114 MLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENI 170
Query: 285 LRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT-KVDVFSFAL 342
L D G K+ DFG LL D P T D + Y PE +Y V+S +
Sbjct: 171 LIDLRRGCAKLIDFGSGALL---HDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGI 227
Query: 343 ILQEMIEGCPPFTMKHDNEVPKA---YAARQRPPFKAPAKLYARGLKELIEECWNEKPAK 399
+L +M+ G PF + D E+ +A + A P A LI C KP+
Sbjct: 228 LLYDMVCGDIPF--ERDQEILEAELHFPAHVSPDCCA-----------LIRRCLAPKPSS 274
Query: 400 RPTFRQII 407
RP+ +I+
Sbjct: 275 RPSLEEIL 282
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L++IRHPN++ + ++++ E + G+L FL K +L A +F I
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 138
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSG----NLKVADFGVSKLLTVKEDRPLTCQD 315
G++YLH + I H DL+P NI+ D +K+ DFG++ ++
Sbjct: 139 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIF 193
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
+ +VAPE+ E + D++S +I ++ G PF
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 126 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 181
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D + + Y APE+ N Y+ VD++S I+ E++
Sbjct: 182 CELKILDFGLAR----HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
Query: 349 EG 350
G
Sbjct: 238 TG 239
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 86
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 144
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP-LTCQDTSCR-YVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D + + R Y APE
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 88/190 (46%), Gaps = 23/190 (12%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
GI VAVKKL + RA+R EL LL+ + H N++ L T P + E+
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFT---PQKTLEEF--- 99
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNI 284
D+ ++ A + LD R G+ +LH IIHRDL+PSNI
Sbjct: 100 QDVYLVMELMDA-NLCQVIHMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNI 155
Query: 285 LRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALIL 344
+ LK+ DFG+++ T + +T + Y APEV Y VD++S I+
Sbjct: 156 VVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 213
Query: 345 QEMIEGCPPF 354
E+++G F
Sbjct: 214 GELVKGSVIF 223
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAF-----WRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L + RH N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHEN 87
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 145
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP-LTCQDTSCR-YVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D + + R Y APE
Sbjct: 146 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 142/315 (45%), Gaps = 42/315 (13%)
Query: 111 GDAIYYKNHEVIKLLEKHGAKPLMAPMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFI 169
G+ +Y++ + K+ A AP + HA ++ P E +P E + + G F
Sbjct: 8 GENLYFQGSLLSKI--NSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG 65
Query: 170 LAFWRGIQV------AVKKLGEEVISD------DDRVRAFRDELALLQKIRH--PNVVQF 215
+ + GI+V A+K + ++ ISD RV E+ LL+K+ V++
Sbjct: 66 -SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRL 121
Query: 216 LGAVTQSSPMMIVTEY-LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPI 274
L + +++ E P DL F+ +GAL+ A F + + + H +
Sbjct: 122 LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CGV 178
Query: 275 IHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 333
+HRD++ NIL D + G LK+ DFG LL +D T D + Y PE + Y
Sbjct: 179 LHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 334 K-VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEE 391
+ V+S ++L +M+ G PF +HD E+ + RQR + + LI
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRW 284
Query: 392 CWNEKPAKRPTFRQI 406
C +P+ RPTF +I
Sbjct: 285 CLALRPSDRPTFEEI 299
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E + P DL F+ +GAL+ A F
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF 120
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQD 315
+ + + H ++HRD++ NIL D + G LK+ DFG LL +D T D
Sbjct: 121 WQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFD 174
Query: 316 TSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA-RQRPP 373
+ Y PE + Y + V+S ++L +M+ G PF +HD E+ + RQR
Sbjct: 175 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-- 230
Query: 374 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+ + LI C +P+ RPTF +I
Sbjct: 231 -------VSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 127/291 (43%), Gaps = 24/291 (8%)
Query: 129 GAKPLMAPMHVKHA--REVPEYEIDPHE----LD-FTNSVEITKGTFILAFWR--GIQVA 179
G+ P P V H R + +DP + LD F E + G +A R G VA
Sbjct: 1 GSSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVA 60
Query: 180 VKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRA 239
VKK+ + R +E+ +++ +H NVV+ + + +V E+L G L
Sbjct: 61 VKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 117
Query: 240 FLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGV 299
+ + A L + + ++ LH +IHRD++ +IL G +K++DFG
Sbjct: 118 IVTHTRMNEEQIAA-VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGF 173
Query: 300 SKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHD 359
++ + R T ++APE+ Y +VD++S +++ EM++G PP+
Sbjct: 174 CAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF---- 228
Query: 360 NEVPKAYAARQR---PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
NE P R PP + LK ++ PA+R T +++
Sbjct: 229 NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 279
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 102 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 157
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D + + Y APE+ N Y+ VD++S I+ E++
Sbjct: 158 CELKILDFGLAR----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 349 EG 350
G
Sbjct: 214 TG 215
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 157 FTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPN 211
+TN I +G + + ++VA+KK+ + E+ +L RH N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLAFRHEN 84
Query: 212 VVQF-----LGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYL 266
++ + Q + IV + L + DL LK + L F I RG+ Y+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 142
Query: 267 HENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRP--LTCQDTSCRYVAPE 324
H ++HRDL+PSN+L + + +LK+ DFG++++ D LT + Y APE
Sbjct: 143 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 325 VFKNEE-YDTKVDVFSFALILQEMIEGCPPFTMKH 358
+ N + Y +D++S IL EM+ P F KH
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D + + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDFGLAR----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 111/239 (46%), Gaps = 15/239 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G++ A K + + +S D + E + +K++HPN+V+ ++ + S +V + +
Sbjct: 54 GLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 112
Query: 235 GDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGN 291
G+L + + + A I + Y H N I+HR+L+P N+L +
Sbjct: 113 GELFEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAA 169
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
+K+ADFG++ + V + + Y++PEV K + Y VD+++ +IL ++ G
Sbjct: 170 VKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 227
Query: 352 PPFTMKHDNEVPKAYAARQRPPFKAPAKLY---ARGLKELIEECWNEKPAKRPTFRQII 407
PPF D + + YA + + P+ + K LI+ P KR T Q +
Sbjct: 228 PPFW---DEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 283
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ D + + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDFGLAR----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 40/291 (13%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 15 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 73
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 74 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADF 297
F+ +GAL+ A F + + + H ++HRD++ NIL D + G LK+ DF
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTM 356
G LL +D T D + Y PE + Y + V+S ++L +M+ G PF
Sbjct: 188 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 242
Query: 357 KHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+HD E+ + RQR + + LI C +P+ RPTF +I
Sbjct: 243 EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 89/163 (54%), Gaps = 13/163 (7%)
Query: 253 VRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLT 312
+ ++ +ARGM +L K IHRDL NIL ++ +K+ DFG+++ + D +
Sbjct: 202 ISYSFQVARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY-VR 257
Query: 313 CQDTS--CRYVAPEVFKNEEYDTKVDVFSFALILQEM--IEGCPPFTMKHDNEVPKAYAA 368
DT +++APE ++ Y TK DV+S+ ++L E+ + G P ++ D + + +
Sbjct: 258 KGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDED----FCS 313
Query: 369 RQRPPFKAPAKLYAR-GLKELIEECWNEKPAKRPTFRQIITRL 410
R R + A Y+ + +++ +CW+ P +RP F +++ +L
Sbjct: 314 RLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKI-RHPNVVQFLGAVT-QSSPMMIVTEYLPKG 235
VAVK L E + + +A EL +L I H NVV LGA T Q P+M++ EY G
Sbjct: 60 VAVKMLKEGATASE--YKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYG 117
Query: 236 DLRAFLKRK 244
+L +LK K
Sbjct: 118 NLSNYLKSK 126
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 40/291 (13%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 35 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 93
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 94 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 150
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADF 297
F+ +GAL+ A F + + + H ++HRD++ NIL D + G LK+ DF
Sbjct: 151 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 207
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTM 356
G LL +D T D + Y PE + Y + V+S ++L +M+ G PF
Sbjct: 208 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 262
Query: 357 KHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+HD E+ + RQR + + LI C +P+ RPTF +I
Sbjct: 263 EHDEEIIRGQVFFRQRVSXEC---------QHLIRWCLALRPSDRPTFEEI 304
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 40/291 (13%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 30 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 88
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 89 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 145
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADF 297
F+ +GAL+ A F + + + H ++HRD++ NIL D + G LK+ DF
Sbjct: 146 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTM 356
G LL +D T D + Y PE + Y + V+S ++L +M+ G PF
Sbjct: 203 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 257
Query: 357 KHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+HD E+ + RQR + + LI C +P+ RPTF +I
Sbjct: 258 EHDEEIIRGQVFFRQR---------VSXECQHLIRWCLALRPSDRPTFEEI 299
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 40/291 (13%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 2 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 60
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 61 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 117
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADF 297
F+ +GAL+ A F + + + H ++HRD++ NIL D + G LK+ DF
Sbjct: 118 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 174
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTM 356
G LL +D T D + Y PE + Y + V+S ++L +M+ G PF
Sbjct: 175 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 229
Query: 357 KHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+HD E+ + RQR + + LI C +P+ RPTF +I
Sbjct: 230 EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 271
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 40/291 (13%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 3 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 61
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 62 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 118
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADF 297
F+ +GAL+ A F + + + H ++HRD++ NIL D + G LK+ DF
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 175
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTM 356
G LL +D T D + Y PE + Y + V+S ++L +M+ G PF
Sbjct: 176 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 230
Query: 357 KHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+HD E+ + RQR + + LI C +P+ RPTF +I
Sbjct: 231 EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 272
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 40/291 (13%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 2 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 60
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 61 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 117
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADF 297
F+ +GAL+ A F + + + H ++HRD++ NIL D + G LK+ DF
Sbjct: 118 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 174
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTM 356
G LL +D T D + Y PE + Y + V+S ++L +M+ G PF
Sbjct: 175 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 229
Query: 357 KHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+HD E+ + RQR + + LI C +P+ RPTF +I
Sbjct: 230 EHDEEIIRGQVFFRQR---------VSXECQHLIRWCLALRPSDRPTFEEI 271
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 40/291 (13%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 3 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 61
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 62 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 118
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADF 297
F+ +GAL+ A F + + + H ++HRD++ NIL D + G LK+ DF
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 175
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTM 356
G LL +D T D + Y PE + Y + V+S ++L +M+ G PF
Sbjct: 176 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 230
Query: 357 KHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+HD E+ + RQR + + LI C +P+ RPTF +I
Sbjct: 231 EHDEEIIRGQVFFRQR---------VSXECQHLIRWCLALRPSDRPTFEEI 272
>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267.
pdb|4HB5|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267
Length = 169
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 24 KEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQ 83
K A+ N D DG L + A E +K LL G D N +D D RT LH AA
Sbjct: 59 KGADPNAKDSDGR-----TPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAEN 113
Query: 84 GFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
G E+V LLL +GAD + D G TPL A + N E++KLLEK G
Sbjct: 114 GHKEIVKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%)
Query: 43 RLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPK 102
RL+ A + + +K+LL++G D N D D RT LH AA G E+V LLL +GAD + K
Sbjct: 7 RLIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAK 66
Query: 103 DRWGSTPLGDAIYYKNHEVIKLLEKHGAKP 132
D G TPL A + E++KLL GA P
Sbjct: 67 DSDGRTPLHYAAENGHKEIVKLLLSKGADP 96
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 54/104 (51%)
Query: 29 NGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEV 88
NG D + + L + A E +K LL G D N +D D RT LH AA G E+
Sbjct: 26 NGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEI 85
Query: 89 VSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGAKP 132
V LLL +GAD + KD G TPL A + E++KLL GA P
Sbjct: 86 VKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADP 129
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 30/220 (13%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQ 205
P E+ +T++ I G+F + + G VA+KK+ + +AF++ EL +++
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG--------KAFKNRELQIMR 68
Query: 206 KIRHPNVVQFLGAVTQSSP------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFA 256
K+ H N+V+ S + +V +Y+P+ R + + K L +
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQD 315
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 129 YQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYI 183
Query: 316 TSCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 162 EITKGTFILAFWRGIQ--VAVKKLGEEVISDDDR---VRAFRDELALLQKIRHPNVVQFL 216
E T GT A R VA+K++ + DDD A R E+ LL++++H N+V+
Sbjct: 12 EGTYGTVFKAKNRETHEIVALKRVR---LDDDDEGVPSSALR-EICLLKELKHKNIVRLH 67
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
+ + +V E+ + + F G L P F + +G+ + H ++H
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLH 124
Query: 277 RDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDT---SCRYVAPEV-FKNEEYD 332
RDL+P N+L + +G LK+A+FG+++ + P+ C + Y P+V F + Y
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARAFGI----PVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 333 TKVDVFSFALILQEMIEGCPPFTMKHD 359
T +D++S I E+ P +D
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGND 207
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 121/264 (45%), Gaps = 19/264 (7%)
Query: 151 DPHELDFTNSVEITKG-TFILAFWR----GIQVAVKKLGEEVISDDDRVRAFRDELALLQ 205
DP L + V+I +G T I+ R G QVAVK + + R +E+ +++
Sbjct: 42 DPRLL-LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMD---LRKQQRRELLFNEVVIMR 97
Query: 206 KIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNY 265
+H NVV+ + + ++ E+L G L + + L + + + Y
Sbjct: 98 DYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-RLNEEQIATVCEAVLQALAY 156
Query: 266 LHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRY-VAPE 324
LH +IHRD++ +IL G +K++DFG + +D P Y +APE
Sbjct: 157 LHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCA--QISKDVPKRKXLVGTPYWMAPE 211
Query: 325 VFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAP-AKLYAR 383
V Y T+VD++S +++ EM++G PP+ D+ V R PP K + +
Sbjct: 212 VISRSLYATEVDIWSLGIMVIEMVDGEPPYF--SDSPVQAMKRLRDSPPPKLKNSHKVSP 269
Query: 384 GLKELIEECWNEKPAKRPTFRQII 407
L++ +E P +R T ++++
Sbjct: 270 VLRDFLERMLVRDPQERATAQELL 293
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 13/169 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L+K+ HP +++ + + IV E + G+L + LK +T + +
Sbjct: 204 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ YLHEN IIHRDL+P N+L +++ +K+ DFG SK+L C
Sbjct: 263 LLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 319
Query: 317 SCRYVAPEVF---KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
+ Y+APEV Y+ VD +S +IL + G PPF+ +H +V
Sbjct: 320 T--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-EHRTQV 365
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G +VAVKKL S R +R EL LL+ ++H NV+ L T + + + +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
+L DL +K + L I RG+ Y+H IIHRDL+PSN+ ++
Sbjct: 106 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 290 GNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMI 348
LK+ DF +++ D +T + Y APE+ N Y+ VD++S I+ E++
Sbjct: 162 CELKILDFYLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 349 EG 350
G
Sbjct: 218 TG 219
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 30/220 (13%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQ 205
P E+ +T++ I G+F + + G VA+KK+ + +AF++ EL +++
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG--------KAFKNRELQIMR 68
Query: 206 KIRHPNVVQFLGAVTQSSP------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFA 256
K+ H N+V+ S + +V +Y+P+ R + + K L +
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQD 315
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 129 YQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYI 183
Query: 316 TSCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 131/291 (45%), Gaps = 40/291 (13%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 16 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 74
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 75 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADF 297
F+ +GAL+ A F + + + H ++HRD++ NIL D + G LK+ DF
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTM 356
G LL +D T D + Y PE + Y + V+S ++L +M+ G PF
Sbjct: 189 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 243
Query: 357 KHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+HD E+ RQR + + LI C +P+ RPTF +I
Sbjct: 244 EHDEEIIGGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 13/169 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L+K+ HP +++ + + IV E + G+L + LK +T + +
Sbjct: 190 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ YLHEN IIHRDL+P N+L +++ +K+ DFG SK+L C
Sbjct: 249 LLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 305
Query: 317 SCRYVAPEVF---KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
+ Y+APEV Y+ VD +S +IL + G PPF+ +H +V
Sbjct: 306 T--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-EHRTQV 351
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 131/291 (45%), Gaps = 40/291 (13%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 16 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 74
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 75 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADF 297
F+ +GAL+ A F + + + H ++HRD++ NIL D + G LK+ DF
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTM 356
G LL +D T D + Y PE + Y + V+S ++L +M+ G PF
Sbjct: 189 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 243
Query: 357 KHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+HD E+ RQR + + LI C +P+ RPTF +I
Sbjct: 244 EHDEEIIGGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 131/291 (45%), Gaps = 40/291 (13%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 3 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 61
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 62 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 118
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADF 297
F+ +GAL+ A F + + + H ++HRD++ NIL D + G LK+ DF
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 175
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTM 356
G LL +D T D + Y PE + Y + V+S ++L +M+ G PF
Sbjct: 176 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 230
Query: 357 KHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+HD E+ + RQR + + LI C +P RPTF +I
Sbjct: 231 EHDEEIIRGQVFFRQR---------VSXECQHLIRWCLALRPXDRPTFEEI 272
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 23/187 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFT---PQKSLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A S ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 105 YIVMELMDA-NLSQVIQMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVK 160
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S +I+ EM
Sbjct: 161 SDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
Query: 348 IEGCPPF 354
I+G F
Sbjct: 219 IKGGVLF 225
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 80/170 (47%), Gaps = 24/170 (14%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-----KGALKPST 251
F +E ++ P VVQ A + +V EY+P GDL + K A +
Sbjct: 122 FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTA 181
Query: 252 AVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPL 311
V ALD M +IHRD++P N+L D G+LK+ADFG + + E +
Sbjct: 182 EVVLALDAIHSMG---------LIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMV 230
Query: 312 TCQDTSCR---YVAPEVFKNEE----YDTKVDVFSFALILQEMIEGCPPF 354
C DT+ Y++PEV K++ Y + D +S + L EM+ G PF
Sbjct: 231 HC-DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 131/291 (45%), Gaps = 40/291 (13%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 15 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 73
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 74 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADF 297
F+ +GAL+ A F + + + H ++HRD++ NIL D + G LK+ DF
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTM 356
G LL +D T D + Y PE + Y + V+S ++L +M+ G PF
Sbjct: 188 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 242
Query: 357 KHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+HD E+ RQR + + LI C +P+ RPTF +I
Sbjct: 243 EHDEEIIGGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG- 290
+ G+L FL K +L A F I G+ YLH + I H DL+P NI+ D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 152
Query: 291 ---NLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
+K+ DFG++ + + + +VAPE+ E + D++S +I +
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 348 IEGCPPF 354
+ G PF
Sbjct: 211 LSGASPF 217
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 13/169 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L+K+ HP +++ + + IV E + G+L + LK +T + +
Sbjct: 64 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ YLHEN IIHRDL+P N+L +++ +K+ DFG SK+L C
Sbjct: 123 LLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 179
Query: 317 SCRYVAPEVF---KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
+ Y+APEV Y+ VD +S +IL + G PPF+ +H +V
Sbjct: 180 T--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-EHRTQV 225
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG- 290
+ G+L FL K +L A F I G+ YLH + I H DL+P NI+ D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 152
Query: 291 ---NLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
+K+ DFG++ + + + +VAPE+ E + D++S +I +
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 348 IEGCPPF 354
+ G PF
Sbjct: 211 LSGASPF 217
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 13/169 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L+K+ HP +++ + + IV E + G+L + LK +T + +
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ YLHEN IIHRDL+P N+L +++ +K+ DFG SK+L C
Sbjct: 124 LLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 317 SCRYVAPEVF---KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
+ Y+APEV Y+ VD +S +IL + G PPF+ +H +V
Sbjct: 181 T--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-EHRTQV 226
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEY-LPKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQD 315
+ + + H ++HRD++ NIL D + G LK+ DFG LL +D T D
Sbjct: 117 WQVLEAVRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFD 170
Query: 316 TSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA-RQRPP 373
+ Y PE + Y + V+S ++L +M+ G PF +HD E+ + RQR
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQRVS 228
Query: 374 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+ + LI C +P+ RPTF +I
Sbjct: 229 XEC---------QHLIRWCLALRPSDRPTFEEI 252
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG- 290
+ G+L FL K +L A F I G+ YLH + I H DL+P NI+ D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 152
Query: 291 ---NLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
+K+ DFG++ + + + +VAPE+ E + D++S +I +
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 348 IEGCPPF 354
+ G PF
Sbjct: 211 LSGASPF 217
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 131/291 (45%), Gaps = 40/291 (13%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 15 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 73
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 74 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADF 297
F+ +GAL+ A F + + + H ++HRD++ NIL D + G LK+ DF
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTM 356
G LL +D T D + Y PE + Y + V+S ++L +M+ G PF
Sbjct: 188 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 242
Query: 357 KHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+HD E+ RQR + + LI C +P+ RPTF +I
Sbjct: 243 EHDEEIIGGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 30/220 (13%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRD-ELALLQ 205
P E+ +T++ I G+F + + G VA+KK+ + +AF++ EL +++
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG--------KAFKNRELQIMR 68
Query: 206 KIRHPNVVQFLGAVTQSSP------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFA 256
K+ H N+V+ S + +V +Y+P R + + K L +
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQD 315
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 129 YQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXI 183
Query: 316 TSCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG- 290
+ G+L FL K +L A F I G+ YLH + I H DL+P NI+ D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 152
Query: 291 ---NLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
+K+ DFG++ + + + +VAPE+ E + D++S +I +
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 348 IEGCPPF 354
+ G PF
Sbjct: 211 LSGASPF 217
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 35 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 94
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG- 290
+ G+L FL K +L A F I G+ YLH + I H DL+P NI+ D
Sbjct: 95 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 151
Query: 291 ---NLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
+K+ DFG++ + + + +VAPE+ E + D++S +I +
Sbjct: 152 PKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 209
Query: 348 IEGCPPF 354
+ G PF
Sbjct: 210 LSGASPF 216
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 13/169 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L+K+ HP +++ + + IV E + G+L + LK +T + +
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ YLHEN IIHRDL+P N+L +++ +K+ DFG SK+L C
Sbjct: 124 LLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 317 SCRYVAPEVF---KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
+ Y+APEV Y+ VD +S +IL + G PPF+ +H +V
Sbjct: 181 T--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-EHRTQV 226
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 35 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 94
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG- 290
+ G+L FL K +L A F I G+ YLH + I H DL+P NI+ D
Sbjct: 95 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 151
Query: 291 ---NLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
+K+ DFG++ + + + +VAPE+ E + D++S +I +
Sbjct: 152 PKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 209
Query: 348 IEGCPPF 354
+ G PF
Sbjct: 210 LSGASPF 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG- 290
+ G+L FL K +L A F I G+ YLH + I H DL+P NI+ D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 152
Query: 291 ---NLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
+K+ DFG++ + + + +VAPE+ E + D++S +I +
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 348 IEGCPPF 354
+ G PF
Sbjct: 211 LSGASPF 217
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 131/291 (45%), Gaps = 40/291 (13%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 16 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 74
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 75 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADF 297
F+ +GAL+ A F + + + H ++HRD++ NIL D + G LK+ DF
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTM 356
G LL +D T D + Y PE + Y + V+S ++L +M+ G PF
Sbjct: 189 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 243
Query: 357 KHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+HD E+ RQR + + LI C +P+ RPTF +I
Sbjct: 244 EHDEEIIGGQVFFRQRVSXEC---------QHLIRWCLALRPSDRPTFEEI 285
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 13/169 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L+K+ HP +++ + + IV E + G+L + LK +T + +
Sbjct: 71 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ YLHEN IIHRDL+P N+L +++ +K+ DFG SK+L C
Sbjct: 130 LLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 186
Query: 317 SCRYVAPEVF---KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
+ Y+APEV Y+ VD +S +IL + G PPF+ +H +V
Sbjct: 187 T--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-EHRTQV 232
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 27/260 (10%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+++L+++ H NV+ + ++++ E + G+L FL +K +L A F I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSG----NLKVADFGVSKLLTVKEDRPLTCQD 315
G+NYLH K I H DL+P NI+ D ++K+ DFG++ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIF 179
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF-------TMKHDNEVPKAYAA 368
+ +VAPE+ E + D++S +I ++ G PF T+ + V +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 369 RQRPPFKAPAKLYARGL--KELIEECWNEKPAKRPTF-----RQIITRLESINNSINHK- 420
AK + R L KE + ++ + P +Q + R ES+ N N +
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRK 299
Query: 421 ---RRWKVYLFLSLSVCLHL 437
RR F +S+C HL
Sbjct: 300 QYVRRRSKLAFSIVSLCNHL 319
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 131/291 (45%), Gaps = 40/291 (13%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 15 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 73
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 74 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADF 297
F+ +GAL+ A F + + + H ++HRD++ NIL D + G LK+ DF
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 187
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTM 356
G LL +D T D + Y PE + Y + V+S ++L +M+ G PF
Sbjct: 188 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 242
Query: 357 KHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+HD E+ RQR + + LI C +P+ RPTF +I
Sbjct: 243 EHDEEIIGGQVFFRQRVSXEC---------QHLIRWCLALRPSDRPTFEEI 284
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 27/260 (10%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+++L+++ H NV+ + ++++ E + G+L FL +K +L A F I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSG----NLKVADFGVSKLLTVKEDRPLTCQD 315
G+NYLH K I H DL+P NI+ D ++K+ DFG++ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIF 179
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF-------TMKHDNEVPKAYAA 368
+ +VAPE+ E + D++S +I ++ G PF T+ + V +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 369 RQRPPFKAPAKLYARGL--KELIEECWNEKPAKRPTF-----RQIITRLESINNSINHK- 420
AK + R L KE + ++ + P +Q + R ES+ N N +
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRK 299
Query: 421 ---RRWKVYLFLSLSVCLHL 437
RR F +S+C HL
Sbjct: 300 QYVRRRSKLAFSIVSLCNHL 319
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 131/291 (45%), Gaps = 40/291 (13%)
Query: 135 APMHVKHAREV-PEYEIDPHELDFTNSVEITKGTFILAFWRGIQV------AVKKLGEEV 187
AP + HA ++ P E +P E + + G F + + GI+V A+K + ++
Sbjct: 16 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLPVAIKHVEKDR 74
Query: 188 ISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEYL-PKGDLR 238
ISD RV E+ LL+K+ V++ L + +++ E P DL
Sbjct: 75 ISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 239 AFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADF 297
F+ +GAL+ A F + + + H ++HRD++ NIL D + G LK+ DF
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF 188
Query: 298 GVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTM 356
G LL +D T D + Y PE + Y + V+S ++L +M+ G PF
Sbjct: 189 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 243
Query: 357 KHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+HD E+ RQR + + LI C +P+ RPTF +I
Sbjct: 244 EHDEEIIGGQVFFRQRVSXEC---------QHLIRWCLALRPSDRPTFEEI 285
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 13/169 (7%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+ +L+K+ HP +++ + + IV E + G+L + LK +T + +
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ YLHEN IIHRDL+P N+L +++ +K+ DFG SK+L C
Sbjct: 124 LLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 317 SCRYVAPEVF---KNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
+ Y+APEV Y+ VD +S +IL + G PPF+ +H +V
Sbjct: 181 T--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-EHRTQV 226
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 23/187 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFT---PQKSLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A S ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 105 YIVMELMDA-NLSQVIQMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVK 160
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S +I+ EM
Sbjct: 161 SDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
Query: 348 IEGCPPF 354
I+G F
Sbjct: 219 IKGGVLF 225
>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex)
Length = 169
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 63/120 (52%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + L A +E ++ LL G DVN D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAID 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
I T LH+AA G E+V +LL+ GADV+ D WG TPL A + E++++L KHGA
Sbjct: 78 IXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGA 137
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 53 VEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGD 112
+E ++ LL G DVN D T LH+AA G E+V +LL+ GADV+ +D++G T
Sbjct: 93 LEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDI 152
Query: 113 AIYYKNHEVIKLLEK 127
+I N ++ ++L+K
Sbjct: 153 SIDNGNEDLAEILQK 167
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG- 290
+ G+L FL K +L A F I G+ YLH + I H DL+P NI+ D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 152
Query: 291 ---NLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
+K+ DFG++ + + + +VAPE+ E + D++S +I +
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 348 IEGCPPF 354
+ G PF
Sbjct: 211 LSGASPF 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG- 290
+ G+L FL K +L A F I G+ YLH + I H DL+P NI+ D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 152
Query: 291 ---NLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
+K+ DFG++ + + + +VAPE+ E + D++S +I +
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 348 IEGCPPF 354
+ G PF
Sbjct: 211 LSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG- 290
+ G+L FL K +L A F I G+ YLH + I H DL+P NI+ D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 152
Query: 291 ---NLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
+K+ DFG++ + + + +VAPE+ E + D++S +I +
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 348 IEGCPPF 354
+ G PF
Sbjct: 211 LSGASPF 217
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 160
Query: 283 NIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFS 339
N+L + + LK+ DFG +K T LT + YVAPEV E+YD D++S
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 218
Query: 340 FALILQEMIEGCPPFTMKHDNEVPKAYAARQR 371
+I+ ++ G PPF H + R R
Sbjct: 219 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 250
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDI 259
E+++L+++ H NV+ + ++++ E + G+L FL +K +L A F I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 260 ARGMNYLHENKPVPIIHRDLEPSNILRDDSG----NLKVADFGVSKLLTVKEDRPLTCQD 315
G+NYLH K I H DL+P NI+ D ++K+ DFG++ +++
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIF 179
Query: 316 TSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
+ +VAPE+ E + D++S +I ++ G PF
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 146
Query: 283 NIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFS 339
N+L + + LK+ DFG +K T LT + YVAPEV E+YD D++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 204
Query: 340 FALILQEMIEGCPPFTMKHDNEVPKAYAARQR 371
+I+ ++ G PPF H + R R
Sbjct: 205 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 236
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 152
Query: 283 NIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFS 339
N+L + + LK+ DFG +K T LT + YVAPEV E+YD D++S
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 210
Query: 340 FALILQEMIEGCPPFTMKHDNEVPKAYAARQR 371
+I+ ++ G PPF H + R R
Sbjct: 211 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 242
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEY-LPKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 60 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 119
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQD 315
+ + + H ++HRD++ NIL D + G LK+ DFG LL +D T D
Sbjct: 120 WQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFD 173
Query: 316 TSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA-RQRPP 373
+ Y PE + Y + V+S ++L +M+ G PF +HD E+ + RQR
Sbjct: 174 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-- 229
Query: 374 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+ + LI C +P+ RPTF +I
Sbjct: 230 -------VSSECQHLIRWCLALRPSDRPTFEEI 255
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG- 290
+ G+L FL K +L A F I G+ YLH + I H DL+P NI+ D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 152
Query: 291 ---NLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
+K+ DFG++ + + + +VAPE+ E + D++S +I +
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 348 IEGCPPF 354
+ G PF
Sbjct: 211 LSGASPF 217
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 69
Query: 207 IRHPNVVQFLGAVTQSSP------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ S + +V +Y+P+ R + + K L +
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 130 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXIC 184
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 150
Query: 283 NIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFS 339
N+L + + LK+ DFG +K T LT + YVAPEV E+YD D++S
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 208
Query: 340 FALILQEMIEGCPPFTMKHDNEVPKAYAARQR 371
+I+ ++ G PPF H + R R
Sbjct: 209 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 240
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG- 290
+ G+L FL K +L A F I G+ YLH + I H DL+P NI+ D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 152
Query: 291 ---NLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
+K+ DFG++ + + + +VAPE+ E + D++S +I +
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 348 IEGCPPF 354
+ G PF
Sbjct: 211 LSGASPF 217
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 151
Query: 283 NIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFS 339
N+L + + LK+ DFG +K T LT + YVAPEV E+YD D++S
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 209
Query: 340 FALILQEMIEGCPPFTMKHDNEVPKAYAARQR 371
+I+ ++ G PPF H + R R
Sbjct: 210 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 241
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEY-LPKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQD 315
+ + + H ++HRD++ NIL D + G LK+ DFG LL +D T D
Sbjct: 117 WQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFD 170
Query: 316 TSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA-RQRPP 373
+ Y PE + Y + V+S ++L +M+ G PF +HD E+ + RQR
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-- 226
Query: 374 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+ + LI C +P+ RPTF +I
Sbjct: 227 -------VSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 196
Query: 283 NIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFS 339
N+L + + LK+ DFG +K T LT + YVAPEV E+YD D++S
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 254
Query: 340 FALILQEMIEGCPPFTMKHDNEVPKAYAARQR 371
+I+ ++ G PPF H + R R
Sbjct: 255 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 286
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 69
Query: 207 IRHPNVVQFLGAVTQSSP------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ S + +V +Y+P+ R + + K L +
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 130 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXIC 184
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 144
Query: 283 NIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFS 339
N+L + + LK+ DFG +K T LT + YVAPEV E+YD D++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 202
Query: 340 FALILQEMIEGCPPFTMKHDNEVPKAYAARQR 371
+I+ ++ G PPF H + R R
Sbjct: 203 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 234
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 21 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 73
Query: 207 IRHPNVVQFLGAVTQSSP------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ S + +V +Y+P+ R + + K L +
Sbjct: 74 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 133
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 134 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXIC 188
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 189 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 190
Query: 283 NIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFS 339
N+L + + LK+ DFG +K T LT + YVAPEV E+YD D++S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 248
Query: 340 FALILQEMIEGCPPFTMKHDNEVPKAYAARQR 371
+I+ ++ G PPF H + R R
Sbjct: 249 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 280
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 29 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 81
Query: 207 IRHPNVVQFLGAVTQSSP------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ S + +V +Y+P+ R + + K L +
Sbjct: 82 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 141
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 142 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXIC 196
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 145
Query: 283 NIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFS 339
N+L + + LK+ DFG +K T LT + YVAPEV E+YD D++S
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 203
Query: 340 FALILQEMIEGCPPFTMKHDNEVPKAYAARQR 371
+I+ ++ G PPF H + R R
Sbjct: 204 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 235
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 146
Query: 283 NIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFS 339
N+L + + LK+ DFG +K T LT + YVAPEV E+YD D++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 204
Query: 340 FALILQEMIEGCPPFTMKHDNEVPKAYAARQR 371
+I+ ++ G PPF H + R R
Sbjct: 205 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 236
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 18 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 70
Query: 207 IRHPNVVQFLGAVTQSSP------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ S + +V +Y+P+ R + + K L +
Sbjct: 71 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 130
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 131 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXIC 185
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 186 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 69
Query: 207 IRHPNVVQFLGAVTQSSP------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ S + +V +Y+P+ R + + K L +
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 130 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYIC 184
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 29 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 81
Query: 207 IRHPNVVQFLGAVTQSSP------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ S + +V +Y+P+ R + + K L +
Sbjct: 82 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 141
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 142 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXIC 196
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG- 290
+ G+L FL K +L A F I G+ YLH + I H DL+P NI+ D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 152
Query: 291 ---NLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
+K+ DFG++ + + + +VAPE+ E + D++S +I +
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 348 IEGCPPF 354
+ G PF
Sbjct: 211 LSGASPF 217
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 69
Query: 207 IRHPNVVQFLGAVTQSSP------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ S + +V +Y+P+ R + + K L +
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 130 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXIC 184
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 25 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 77
Query: 207 IRHPNVVQFLGAVTQSSP------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ S + +V +Y+P+ R + + K L +
Sbjct: 78 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 137
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 138 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXIC 192
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 193 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 30 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 82
Query: 207 IRHPNVVQFLGAVTQSSP------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ S + +V +Y+P+ R + + K L +
Sbjct: 83 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 142
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 143 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYIC 197
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 198 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 36 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 88
Query: 207 IRHPNVVQFLGAVTQSSP------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ S + +V +Y+P+ R + + K L +
Sbjct: 89 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 148
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 149 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXIC 203
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 204 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 12/187 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTE-YLP 233
G +VA+KKL S+ RA+R EL LL+ ++H NV+ L T +S + + YL
Sbjct: 67 GEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125
Query: 234 KGDLRAFLKRKGALKPS--TAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
++ L++ ++ S + +G+ Y+H ++HRDL+P N+ ++
Sbjct: 126 MPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCE 182
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMIEG 350
LK+ DFG+++ D +T + Y APEV + Y+ VD++S I+ EM+ G
Sbjct: 183 LKILDFGLAR----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 238
Query: 351 CPPFTMK 357
F K
Sbjct: 239 KTLFKGK 245
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 22 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 74
Query: 207 IRHPNVVQFLGAVTQSSP------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ S + +V +Y+P+ R + + K L +
Sbjct: 75 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 134
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 135 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYIC 189
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 190 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEY-LPKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 120
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQD 315
+ + + H ++HRD++ NIL D + G LK+ DFG LL +D T D
Sbjct: 121 WQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFD 174
Query: 316 TSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA-RQRPP 373
+ Y PE + Y + V+S ++L +M+ G PF +HD E+ + RQR
Sbjct: 175 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-- 230
Query: 374 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+ + LI C +P+ RPTF +I
Sbjct: 231 -------VSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEY-LPKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQD 315
+ + + H ++HRD++ NIL D + G LK+ DFG LL +D T D
Sbjct: 122 WQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFD 175
Query: 316 TSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA-RQRPP 373
+ Y PE + Y + V+S ++L +M+ G PF +HD E+ + RQR
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-- 231
Query: 374 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+ + LI C +P+ RPTF +I
Sbjct: 232 -------VSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin
pdb|4DRX|F Chain F, Gtp-Tubulin In Complex With A Darpin
Length = 169
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 63/120 (52%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + L A +E ++ LL G DVN D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAID 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
I T LH+AA G E+V +LL+ GADV+ D WG TPL A + E++++L KHGA
Sbjct: 78 IMGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGA 137
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 53 VEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGD 112
+E ++ LL G DVN D T LH+AA G E+V +LL+ GADV+ +D++G T
Sbjct: 93 LEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDI 152
Query: 113 AIYYKNHEVIKLLEK 127
+I N ++ ++L+K
Sbjct: 153 SIDNGNEDLAEILQK 167
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFT---PQKSLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A S ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 105 YIVMELMDA-NLSQVIQMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVK 160
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM
Sbjct: 161 SDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 348 IEGCPPF 354
I+G F
Sbjct: 219 IKGGVLF 225
>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure
Length = 115
Score = 69.3 bits (168), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 54 EGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDA 113
E +K+LL G DVN R D T LH+AA G E+V LLL +GADV+ + + G+TP A
Sbjct: 23 EEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82
Query: 114 IYYKNHEVIKLLEKHGA 130
+HE++KLL+ GA
Sbjct: 83 KKNGHHEIVKLLDAKGA 99
Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 24 KEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQ 83
K A++N DG L A E +K LL G DVN R D T H+A
Sbjct: 31 KGADVNARSKDGNT-----PLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKN 85
Query: 84 GFTEVVSLLLERGADVDPKDRWGST 108
G E+V LL +GADV+ + WGS+
Sbjct: 86 GHHEIVKLLDAKGADVNARS-WGSS 109
Score = 45.4 bits (106), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 34/59 (57%)
Query: 72 DNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
D T LH AA G E V LL +GADV+ + + G+TPL A + E++KLL GA
Sbjct: 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA 66
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 103
Query: 207 IRHPNVVQF------LGAVTQSSPMMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ G + +V +Y+P+ R + + K L +
Sbjct: 104 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 164 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXIC 218
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEY-LPKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQD 315
+ + + H ++HRD++ NIL D + G LK+ DFG LL +D T D
Sbjct: 122 WQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFD 175
Query: 316 TSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA-RQRPP 373
+ Y PE + Y + V+S ++L +M+ G PF +HD E+ + RQR
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-- 231
Query: 374 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+ + LI C +P+ RPTF +I
Sbjct: 232 -------VSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 27/173 (15%)
Query: 253 VRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDR--- 309
+ ++ +A+GM +L K IHRDL NIL + +K+ DFG+++ + D
Sbjct: 196 ICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 252
Query: 310 -----PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEV 362
PL +++APE + Y + DV+SF ++L E+ G P+ +K D E
Sbjct: 253 GDARLPL-------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 305
Query: 363 PKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
+ R R P ++Y L +CW+ +P++RPTF +++ L ++
Sbjct: 306 CRRLKEGTRMRAPDYTTPEMYQTML-----DCWHGEPSQRPTFSELVEHLGNL 353
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 27/173 (15%)
Query: 253 VRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDR--- 309
+ ++ +A+GM +L K IHRDL NIL + +K+ DFG+++ + D
Sbjct: 194 ICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 250
Query: 310 -----PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEV 362
PL +++APE + Y + DV+SF ++L E+ G P+ +K D E
Sbjct: 251 GDARLPL-------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 303
Query: 363 PKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
+ R R P ++Y L +CW+ +P++RPTF +++ L ++
Sbjct: 304 CRRLKEGTRMRAPDYTTPEMYQTML-----DCWHGEPSQRPTFSELVEHLGNL 351
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRD---ELALLQKIRHPNVVQFLGAVTQSSPMMIVTEY 231
G+Q A K + + R + D E+++L++I+HPNV+ + ++++ E
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG- 290
+ G+L FL K +L A F I G+ YLH + I H DL+P NI+ D
Sbjct: 96 VAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 152
Query: 291 ---NLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
+K+ DFG++ + + + +VAPE+ E + D++S +I +
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNE--FKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 348 IEGCPPF 354
+ G PF
Sbjct: 211 LSGASPF 217
>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r
pdb|2Y0B|H Chain H, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r
Length = 136
Score = 69.3 bits (168), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N +DD G + P L A +E ++ LL G DVN RDI RT LH+AA G
Sbjct: 38 ADVNAMDDAG--VTP---LHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAATVGH 92
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
E+V +LLE GADV+ +D++G T +I N ++ ++L+K
Sbjct: 93 LEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 60.8 bits (146), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D T LH+AA +G E+V +LL+ GADV+ +D WG TPL A
Sbjct: 30 VRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAAT 89
Query: 116 YKNHEVIKLLEKHGA 130
+ E++++L ++GA
Sbjct: 90 VGHLEIVEVLLEYGA 104
Score = 34.7 bits (78), Expect = 0.099, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 84 GFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
G + V +L+ GADV+ D G TPL A + E++++L KHGA
Sbjct: 25 GQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGA 71
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 111/241 (46%), Gaps = 32/241 (13%)
Query: 178 VAVKKLGEEVISD------DDRVRAFRDELALLQKIRH--PNVVQFLGAVTQSSPMMIVT 229
VA+K + ++ ISD RV E+ LL+K+ V++ L + +++
Sbjct: 79 VAIKHVEKDRISDWGELPNGTRVPM---EVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 135
Query: 230 EY-LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRD- 287
E P DL F+ +GAL+ A F + + + H ++HRD++ NIL D
Sbjct: 136 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDL 192
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTK-VDVFSFALILQE 346
+ G LK+ DFG LL +D T D + Y PE + Y + V+S ++L +
Sbjct: 193 NRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 249
Query: 347 MIEGCPPFTMKHDNEVPKAYAA-RQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQ 405
M+ G PF +HD E+ + RQR + + LI C +P+ RPTF +
Sbjct: 250 MVCGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEE 298
Query: 406 I 406
I
Sbjct: 299 I 299
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEY-LPKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 143
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQD 315
+ + + H ++HRD++ NIL D + G LK+ DFG LL +D T D
Sbjct: 144 WQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFD 197
Query: 316 TSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA-RQRPP 373
+ Y PE + Y + V+S ++L +M+ G PF +HD E+ + RQR
Sbjct: 198 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQRVS 255
Query: 374 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+ + LI C +P+ RPTF +I
Sbjct: 256 XEC---------QHLIRWCLALRPSDRPTFEEI 279
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFT---PQKSLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A S ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 105 YIVMELMDA-NLSQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 160
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM
Sbjct: 161 SDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 348 IEG 350
I+G
Sbjct: 219 IKG 221
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 45 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 97
Query: 207 IRHPNVVQFLGAVTQSSP------MMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ S + +V +Y+P+ R + + K L +
Sbjct: 98 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 157
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 158 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYIC 212
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 213 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFT---PQKSLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A S ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 105 YIVMELMDA-NLSQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 160
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM
Sbjct: 161 SDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 348 IEG 350
I+G
Sbjct: 219 IKG 221
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEY-LPKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQD 315
+ + + H ++HRD++ NIL D + G LK+ DFG LL +D T D
Sbjct: 122 WQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFD 175
Query: 316 TSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA-RQRPP 373
+ Y PE + Y + V+S ++L +M+ G PF +HD E+ + RQR
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-- 231
Query: 374 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+ + LI C +P+ RPTF +I
Sbjct: 232 -------VSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 103
Query: 207 IRHPNVVQF------LGAVTQSSPMMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ G + +V +Y+P+ R + + K L +
Sbjct: 104 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 164 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYIC 218
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 96 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 148
Query: 207 IRHPNVVQF------LGAVTQSSPMMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ G + +V +Y+P+ R + + K L +
Sbjct: 149 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 208
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 209 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYIC 263
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 264 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 144
Query: 283 NIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFS 339
N+L + + LK+ DFG +K T C + YVAPEV E+YD D++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCY--TPYYVAPEVLGPEKYDKSCDMWS 202
Query: 340 FALILQEMIEGCPPFTMKHDNEVPKAYAARQR 371
+I+ ++ G PPF H + R R
Sbjct: 203 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 234
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 55 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 107
Query: 207 IRHPNVVQF------LGAVTQSSPMMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ G + +V +Y+P+ R + + K L +
Sbjct: 108 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 167
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 168 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYIC 222
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 223 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 13/183 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G QVA+KK+ + R R EL +L+ +H N++ + + P + V
Sbjct: 79 GQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 137
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
L + DL + L F + RG+ Y+H + +IHRDL+PSN+L +++
Sbjct: 138 LDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNEN 194
Query: 290 GNLKVADFGVSKLLTVK--EDRPLTCQDTSCR-YVAPEVFKN-EEYDTKVDVFSFALILQ 345
LK+ DFG+++ L E + + + R Y APE+ + EY +D++S I
Sbjct: 195 CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG 254
Query: 346 EMI 348
EM+
Sbjct: 255 EML 257
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 27/173 (15%)
Query: 253 VRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDR--- 309
+ ++ +A+GM +L K IHRDL NIL + +K+ DFG+++ + D
Sbjct: 201 ICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 257
Query: 310 -----PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEV 362
PL +++APE + Y + DV+SF ++L E+ G P+ +K D E
Sbjct: 258 GDARLPL-------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 310
Query: 363 PKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
+ R R P ++Y L +CW+ +P++RPTF +++ L ++
Sbjct: 311 CRRLKEGTRMRAPDYTTPEMYQTML-----DCWHGEPSQRPTFSELVEHLGNL 358
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 27/173 (15%)
Query: 253 VRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDR--- 309
+ ++ +A+GM +L K IHRDL NIL + +K+ DFG+++ + D
Sbjct: 203 ICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 259
Query: 310 -----PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIE-GCPPF-TMKHDNEV 362
PL +++APE + Y + DV+SF ++L E+ G P+ +K D E
Sbjct: 260 GDARLPL-------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 312
Query: 363 PKAY--AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
+ R R P ++Y L +CW+ +P++RPTF +++ L ++
Sbjct: 313 CRRLKEGTRMRAPDYTTPEMYQTML-----DCWHGEPSQRPTFSELVEHLGNL 360
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 152 PHELDFTNSVEITKGTFILAFW-----RGIQVAVKKLGEEVISDDDRVRAFRDELALLQK 206
P E+ +T++ I G+F + + G VA+KK + D R + EL +++K
Sbjct: 53 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFK--NRELQIMRK 105
Query: 207 IRHPNVVQF------LGAVTQSSPMMIVTEYLPKGDLRA---FLKRKGALKPSTAVRFAL 257
+ H N+V+ G + +V +Y+P+ R + + K L +
Sbjct: 106 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 165
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQDT 316
+ R + Y+H I HRD++P N+L D D+ LK+ DFG +K L E P
Sbjct: 166 QLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYIC 220
Query: 317 SCRYVAPE-VFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
S Y APE +F +Y + +DV+S +L E++ G P F
Sbjct: 221 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRV--RAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYL 232
G VA+KK E S+DD V + E+ +L++++HPN+V L + + +V EY
Sbjct: 28 GQIVAIKKFLE---SEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC 84
Query: 233 PKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNL 292
L + + + + +N+ H++ IHRD++P NIL +
Sbjct: 85 DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVI 141
Query: 293 KVADFGVSKLLTVKEDRPLTCQDTSCR-YVAPEVF-KNEEYDTKVDVFSFALILQEMIEG 350
K+ DFG ++LLT D + + R Y +PE+ + +Y VDV++ + E++ G
Sbjct: 142 KLCDFGFARLLTGPSD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
Query: 351 CPPFTMKHDNEVPKAYAARQ 370
P + K D V + Y R+
Sbjct: 200 VPLWPGKSD--VDQLYLIRK 217
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 13/183 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM-----MIVT 229
G QVA+KK+ + R R EL +L+ +H N++ + + P + V
Sbjct: 80 GQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 138
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
L + DL + L F + RG+ Y+H + +IHRDL+PSN+L +++
Sbjct: 139 LDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNEN 195
Query: 290 GNLKVADFGVSKLLTVK--EDRPLTCQDTSCR-YVAPEVFKN-EEYDTKVDVFSFALILQ 345
LK+ DFG+++ L E + + + R Y APE+ + EY +D++S I
Sbjct: 196 CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG 255
Query: 346 EMI 348
EM+
Sbjct: 256 EML 258
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 114/257 (44%), Gaps = 17/257 (6%)
Query: 156 DFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVV 213
+F E + G +A R G VAVKK+ + R +E+ +++ +H NVV
Sbjct: 28 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVV 84
Query: 214 QFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVP 273
+ + + +V E+L G L + + A L + + ++ LH
Sbjct: 85 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQALSVLHAQG--- 140
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 333
+IHRD++ +IL G +K++DFG ++ + R T ++APE+ Y
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGP 199
Query: 334 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR---PPFKAPAKLYARGLKELIE 390
+VD++S +++ EM++G PP+ NE P R PP + LK ++
Sbjct: 200 EVDIWSLGIMVIEMVDGEPPYF----NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 255
Query: 391 ECWNEKPAKRPTFRQII 407
PA+R T +++
Sbjct: 256 RLLVRDPAQRATAAELL 272
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 95/191 (49%), Gaps = 11/191 (5%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G+++A K + + D + V+ +E++++ ++ H N++Q A + +++V EY+
Sbjct: 114 GLKLAAKIIKTRGMKDKEEVK---NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170
Query: 235 GDL-RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL--RDDSGN 291
G+L + L + F I G+ ++H+ + I+H DL+P NIL D+
Sbjct: 171 GELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQ 227
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGC 351
+K+ DFG+++ +E L + ++APEV + D++S +I ++ G
Sbjct: 228 IKIIDFGLARRYKPRE--KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGL 285
Query: 352 PPFTMKHDNEV 362
PF +D E
Sbjct: 286 SPFLGDNDAET 296
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 200 ELALLQKIRH--PNVVQFLGAVTQSSPMMIVTEY-LPKGDLRAFLKRKGALKPSTAVRFA 256
E+ LL+K+ V++ L + +++ E P DL F+ +GAL+ A F
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNILRD-DSGNLKVADFGVSKLLTVKEDRPLTCQD 315
+ + + H ++HRD++ NIL D + G LK+ DFG LL +D T D
Sbjct: 117 WQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFD 170
Query: 316 TSCRYVAPEVFKNEEYDTK-VDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAA-RQRPP 373
+ Y PE + Y + V+S ++L +M+ G PF +HD E+ RQR
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIGGQVFFRQR-- 226
Query: 374 FKAPAKLYARGLKELIEECWNEKPAKRPTFRQI 406
+ + LI C +P+ RPTF +I
Sbjct: 227 -------VSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
pdb|4ATZ|E Chain E, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
pdb|4ATZ|F Chain F, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
Length = 154
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + L A +E ++ LL +G DVN D
Sbjct: 6 LLEAARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVD 65
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
+ T LH+AA G E+V +LL+ GADV+ KD G TPL A Y+ + E++++L KHGA
Sbjct: 66 TNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGA 125
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 23 RKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAAC 82
R A++N +D +G P L A+ +E ++ LL G DVN +D T L++AA
Sbjct: 56 RNGADVNAVDTNG--TTP---LHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAY 110
Query: 83 QGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLE 126
G E+V +LL+ GADV+ +D++G T +I N ++ ++L+
Sbjct: 111 WGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDIGNEDLAEILQ 154
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 170 LAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVT 229
++ G + AVK + E + R R FR+ L Q + N+++ + + +V
Sbjct: 33 VSLQNGKEYAVKII--EKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVF 90
Query: 230 EYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDS 289
E L G + A ++++ A R D+A +++LH I HRDL+P NIL +
Sbjct: 91 EKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKG---IAHRDLKPENILCESP 147
Query: 290 ---GNLKVADFGVSKLLTVKED-RPLTCQD-----TSCRYVAP---EVFKNEE--YDTKV 335
+K+ DF + + + P+T + S Y+AP EVF ++ YD +
Sbjct: 148 EKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRC 207
Query: 336 DVFSFALILQEMIEGCPPF 354
D++S ++L M+ G PPF
Sbjct: 208 DLWSLGVVLYIMLSGYPPF 226
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 109/249 (43%), Gaps = 39/249 (15%)
Query: 191 DDRVRAFRDELALLQKIRHPNVVQF-------------LGAVTQSSPMMIVTEYLPKGDL 237
++++ E+ LL + H VV++ + AV + S + I EY G L
Sbjct: 43 EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL 102
Query: 238 RAFLKRKGALKPSTAV-RFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
+ + + R I ++Y+H IIHRDL+P NI D+S N+K+ D
Sbjct: 103 YDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159
Query: 297 FGVSK-----LLTVKEDRP--------LTCQDTSCRYVAPEVFKNE-EYDTKVDVFSFAL 342
FG++K L +K D LT + YVA EV Y+ K+D++S +
Sbjct: 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGI 219
Query: 343 ILQEMIEGCPPFT--MKHDNEVPKAYAAR-QRPPFKAPAKLYARGLKELIEECWNEKPAK 399
I EMI PF+ M+ N + K + + PP K+ K++I + P K
Sbjct: 220 IFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVE--KKIIRLLIDHDPNK 274
Query: 400 RPTFRQIIT 408
RP R ++
Sbjct: 275 RPGARTLLN 283
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 24/288 (8%)
Query: 132 PLMAPMHVKHA--REVPEYEIDPHE----LD-FTNSVEITKGTFILAFWR--GIQVAVKK 182
P P V H R + +DP + LD F E + G +A R G VAVKK
Sbjct: 2 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK 61
Query: 183 LGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK 242
+ + R +E+ +++ +H NVV+ + + +V E+L G L +
Sbjct: 62 MD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT 118
Query: 243 RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKL 302
+ A L + + ++ LH +IHRD++ +IL G +K++DFG
Sbjct: 119 HTRMNEEQIAA-VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQ 174
Query: 303 LTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
++ + R T ++APE+ Y +VD++S +++ EM++G PP+ NE
Sbjct: 175 VSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF----NEP 229
Query: 363 PKAYAARQR---PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
P R PP + LK ++ PA+R T +++
Sbjct: 230 PLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 277
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 92/183 (50%), Gaps = 12/183 (6%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+K++ E + A R E++LL++++H N+++ + + + ++ EY + DL
Sbjct: 62 VAIKRIRLEHEEEGVPGTAIR-EVSLLKELQHRNIIELKSVIHHNHRLHLIFEY-AENDL 119
Query: 238 RAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL-----RDDSGNL 292
+ ++ + + F + G+N+ H + +HRDL+P N+L ++ L
Sbjct: 120 KKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVL 176
Query: 293 KVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEV-FKNEEYDTKVDVFSFALILQEMIEGC 351
K+ DFG+++ + R T + + Y PE+ + Y T VD++S A I EM+
Sbjct: 177 KIGDFGLARAFGIP-IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT 235
Query: 352 PPF 354
P F
Sbjct: 236 PLF 238
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 114/257 (44%), Gaps = 17/257 (6%)
Query: 156 DFTNSVEITKGTFILAFWR--GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVV 213
+F E + G +A R G VAVKK+ + R +E+ +++ +H NVV
Sbjct: 24 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVV 80
Query: 214 QFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVP 273
+ + + +V E+L G L + + A L + + ++ LH
Sbjct: 81 EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQALSVLHAQG--- 136
Query: 274 IIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 333
+IHRD++ +IL G +K++DFG ++ + R T ++APE+ Y
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGP 195
Query: 334 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQR---PPFKAPAKLYARGLKELIE 390
+VD++S +++ EM++G PP+ NE P R PP + LK ++
Sbjct: 196 EVDIWSLGIMVIEMVDGEPPYF----NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 251
Query: 391 ECWNEKPAKRPTFRQII 407
PA+R T +++
Sbjct: 252 RLLVRDPAQRATAAELL 268
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLR-AFLKRKGA---LKPSTA 252
+ E ++ ++HP++V+ L + + +V E++ DL +KR A + A
Sbjct: 75 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 134
Query: 253 VRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGNLKVADFGVSKLLTVKEDR 309
+ I + Y H+N IIHRD++P +L +++S +K+ FGV+ L +
Sbjct: 135 SHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG-ESGL 190
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
+ + ++APEV K E Y VDV+ +IL ++ GC PF
Sbjct: 191 VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 197 FRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLR-AFLKRKGA---LKPSTA 252
+ E ++ ++HP++V+ L + + +V E++ DL +KR A + A
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 253 VRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGNLKVADFGVSKLLTVKEDR 309
+ I + Y H+N IIHRD++P +L +++S +K+ FGV+ L +
Sbjct: 133 SHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG-ESGL 188
Query: 310 PLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
+ + ++APEV K E Y VDV+ +IL ++ GC PF
Sbjct: 189 VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFT---PQKSLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A S ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 105 YIVMELMDA-NLSQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 160
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM
Sbjct: 161 SDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 348 IEG 350
I+G
Sbjct: 219 IKG 221
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 17/242 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +AVK++ V S + + R D ++ + P V F GA+ + + I E +
Sbjct: 76 GQIMAVKRIRATVNSQEQK-RLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-D 133
Query: 235 GDLRAFLKR---KGALKPSTAV-RFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG 290
L F K+ KG P + + A+ I + + +LH + +IHRD++PSN+L + G
Sbjct: 134 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALG 191
Query: 291 NLKVADFGVSKLLTVKEDRPLTCQDTSCR-YVAPEVFKNE----EYDTKVDVFSFALILQ 345
+K+ DFG+S L D D C+ Y+APE E Y K D++S + +
Sbjct: 192 QVKMCDFGISGYLV---DSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI 248
Query: 346 EMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQ 405
E+ P+ + + P + PA ++ + +C + +RPT+ +
Sbjct: 249 ELAILRFPYD-SWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPE 307
Query: 406 II 407
++
Sbjct: 308 LM 309
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++IV E L G+L + ++ +G A A I + YLH + I HRD++P
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHS---INIAHRDVKPE 190
Query: 283 NIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFS 339
N+L + + LK+ DFG +K T C + YVAPEV E+YD D +S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC--YTPYYVAPEVLGPEKYDKSCDXWS 248
Query: 340 FALILQEMIEGCPPFTMKHDNEVPKAYAARQR 371
+I ++ G PPF H + R R
Sbjct: 249 LGVIXYILLCGYPPFYSNHGLAISPGXKTRIR 280
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 24/288 (8%)
Query: 132 PLMAPMHVKHA--REVPEYEIDPHE----LD-FTNSVEITKGTFILAFWR--GIQVAVKK 182
P P V H R + +DP + LD F E + G +A R G VAVKK
Sbjct: 47 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK 106
Query: 183 LGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK 242
+ + R +E+ +++ +H NVV+ + + +V E+L G L +
Sbjct: 107 MD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT 163
Query: 243 RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKL 302
+ A L + + ++ LH +IHRD++ +IL G +K++DFG
Sbjct: 164 HTRMNEEQIAA-VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQ 219
Query: 303 LTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFTMKHDNEV 362
++ + R T ++APE+ Y +VD++S +++ EM++G PP+ NE
Sbjct: 220 VSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF----NEP 274
Query: 363 PKAYAARQR---PPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQII 407
P R PP + LK ++ PA+R T +++
Sbjct: 275 PLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 322
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVTEY 231
VA+KKL + RA+R EL L++ + H N++ L T + IV E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME- 109
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
L +L ++ + L + G+ +LH IIHRDL+PSNI+
Sbjct: 110 LMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCT 164
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEG 350
LK+ DFG+++ T +T + + Y APEV Y VD++S I+ EMI+G
Sbjct: 165 LKILDFGLAR--TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein
Length = 166
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N D+DG P L A+ +E ++ LL +G DVN D+ T LH+AA G
Sbjct: 38 ADVNATDNDG--YTP---LHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAATGH 92
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
E+V +LL+ GADV+ D G TPL A Y + E++++L KHGA
Sbjct: 93 LEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGA 137
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D D T LH+AA G E+V +LL+ GADV+ D G TPL A
Sbjct: 30 VRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAA 89
Query: 116 YKNHEVIKLLEKHGA 130
+ E++++L KHGA
Sbjct: 90 TGHLEIVEVLLKHGA 104
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 29 NGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEV 88
NG D + ++ L A +E ++ LL G DVN D D T LH+AA G E+
Sbjct: 69 NGADVNASDLTGITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEI 128
Query: 89 VSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLE 126
V +LL+ GADV+ +D++G T +I N ++ ++L+
Sbjct: 129 VEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 17/242 (7%)
Query: 175 GIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPK 234
G +AVK++ V S + + R D ++ + P V F GA+ + + I E L
Sbjct: 32 GQIMAVKRIRATVNSQEQK-RLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME-LMD 89
Query: 235 GDLRAFLKR---KGALKPSTAV-RFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSG 290
L F K+ KG P + + A+ I + + +LH + +IHRD++PSN+L + G
Sbjct: 90 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALG 147
Query: 291 NLKVADFGVSKLLTVKEDRPLTCQDTSCR-YVAPEVFKNE----EYDTKVDVFSFALILQ 345
+K+ DFG+S L + + D C+ Y+APE E Y K D++S + +
Sbjct: 148 QVKMCDFGISGYLVDDVAKDI---DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI 204
Query: 346 EMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQ 405
E+ P+ + + P + PA ++ + +C + +RPT+ +
Sbjct: 205 ELAILRFPYD-SWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPE 263
Query: 406 II 407
++
Sbjct: 264 LM 265
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 38/249 (15%)
Query: 207 IRHPNVVQFLGAVTQSS----PMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARG 262
++H N++QF+ A + S + ++T + KG L +LK + + A ++RG
Sbjct: 66 MKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLK-GNIITWNELCHVAETMSRG 124
Query: 263 MNYLHENKPV--------PIIHRDLEPSNILRDDSGNLKVADFGVS-KLLTVKEDRPLTC 313
++YLHE+ P I HRD + N+L +ADFG++ + K
Sbjct: 125 LSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHG 184
Query: 314 QDTSCRYVAPEVFK---NEEYDT--KVDVFSFALILQEMIEGCP-----------PF--- 354
Q + RY+APEV + N + D ++D+++ L+L E++ C PF
Sbjct: 185 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEE 244
Query: 355 TMKHDN--EVPKAYAARQRPPFKAPAKLYARGLKEL---IEECWNEKPAKRPTFRQIITR 409
+H + E+ + ++ P L GL +L IEECW+ R + + R
Sbjct: 245 IGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLSAGCVEER 304
Query: 410 LESINNSIN 418
+ I S+N
Sbjct: 305 VSLIRRSVN 313
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 17/232 (7%)
Query: 132 PLMAPMHVKHA--REVPEYEIDPHE----LD-FTNSVEITKGTFILAFWR--GIQVAVKK 182
P P V H R + +DP + LD F E + G +A R G VAVKK
Sbjct: 124 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK 183
Query: 183 LGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLK 242
+ + R +E+ +++ +H NVV+ + + +V E+L G L +
Sbjct: 184 MD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT 240
Query: 243 RKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKL 302
+ A L + + ++ LH +IHRD++ +IL G +K++DFG
Sbjct: 241 HTRMNEEQIAA-VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQ 296
Query: 303 LTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPF 354
++ + R T ++APE+ Y +VD++S +++ EM++G PP+
Sbjct: 297 VSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 112/237 (47%), Gaps = 14/237 (5%)
Query: 177 QVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGD 236
+ A K + + +S D + R E + + ++HPN+V+ ++++ +V + + G+
Sbjct: 58 EYAAKIINTKKLSARDHQKLER-EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 116
Query: 237 LRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNIL---RDDSGNLK 293
L + + + A I +N++H++ I+HRDL+P N+L + +K
Sbjct: 117 LFEDIVAREYYSEADASHCIHQILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVK 173
Query: 294 VADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEGCPP 353
+ADFG++ + ++ T Y++PEV + + Y VD+++ +IL ++ G PP
Sbjct: 174 LADFGLAIEVQGEQQAWFGFAGTP-GYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
Query: 354 FTMKHDNEVPKAYAARQRPPFKAPAKLY---ARGLKELIEECWNEKPAKRPTFRQII 407
F D + K Y + + P+ + K LI + PAKR T Q +
Sbjct: 233 FW---DEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQAL 286
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 200 ELALLQKIRHPNVVQFLGAVTQSSP--MMIVTEYLPKGDLRAFLKRKGALKPSTAVRFAL 257
E+A+L+K+ HPNVV+ + + + + +V E + +G + K L A +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-PLSEDQARFYFQ 144
Query: 258 DIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTS 317
D+ +G+ YLH K IIHRD++PSN+L + G++K+ADFGVS D L+ +
Sbjct: 145 DLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFK-GSDALLSNTVGT 200
Query: 318 CRYVAPEVFKNEE---YDTKVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPF 374
++APE +DV++ + L + G PF D + ++ +
Sbjct: 201 PAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM---DERIMCLHSKIKSQAL 257
Query: 375 KAPAKL-YARGLKELIEECWNEKPAKR 400
+ P + A LK+LI ++ P R
Sbjct: 258 EFPDQPDIAEDLKDLITRMLDKNPESR 284
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++I+ E + G+L + ++ +G A A DI + +LH + I HRD++P
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPE 157
Query: 283 NIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFS 339
N+L ++ LK+ DFG +K T L + YVAPEV E+YD D++S
Sbjct: 158 NLLYTSKEKDAVLKLTDFGFAKETT---QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 214
Query: 340 FALILQEMIEGCPPF 354
+I+ ++ G PPF
Sbjct: 215 LGVIMYILLCGFPPF 229
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVTEY 231
VA+KKL + RA+R EL L++ + H N++ L T + IV E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME- 109
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
L +L ++ + L + G+ +LH IIHRDL+PSNI+
Sbjct: 110 LMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCT 164
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEG 350
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EMI+G
Sbjct: 165 LKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVTEY 231
VA+KKL + RA+R EL L++ + H N++ L T + IV E
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME- 110
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
L +L ++ + L + G+ +LH IIHRDL+PSNI+
Sbjct: 111 LMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCT 165
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEG 350
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EMI+G
Sbjct: 166 LKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 225 MMIVTEYLPKGDLRAFLKRKG--ALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPS 282
++I+ E + G+L + ++ +G A A DI + +LH + I HRD++P
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPE 138
Query: 283 NIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFS 339
N+L ++ LK+ DFG +K T L + YVAPEV E+YD D++S
Sbjct: 139 NLLYTSKEKDAVLKLTDFGFAKETT---QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 195
Query: 340 FALILQEMIEGCPPF 354
+I+ ++ G PPF
Sbjct: 196 LGVIMYILLCGFPPF 210
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVTEY 231
VA+KKL + RA+R EL L++ + H N++ L T + IV E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME- 109
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
L +L ++ + L + G+ +LH IIHRDL+PSNI+
Sbjct: 110 LMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCT 164
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEG 350
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EMI+G
Sbjct: 165 LKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 19/252 (7%)
Query: 162 EITKGTF-----ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
E+ KG F + G + A K + + +S D + R E + + ++HPN+V+
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER-EARICRLLKHPNIVRLH 69
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
++++ +V + + G+L + + + A I +N+ H N I+H
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG---IVH 126
Query: 277 RDLEPSNIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 333
RDL+P N+L + +K+ADFG++ + + T Y++PEV + + Y
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTP-GYLSPEVLRKDPYGK 185
Query: 334 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLY---ARGLKELIE 390
VD+++ +IL ++ G PPF D + + Y + + P+ + K+LI
Sbjct: 186 PVDMWACGVILYILLVGYPPFW---DEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 391 ECWNEKPAKRPT 402
+ PAKR T
Sbjct: 243 KMLTINPAKRIT 254
>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4
pdb|2XZD|H Chain H, Caspase-3 In Complex With An Inhibitory Darpin-3.4
Length = 136
Score = 67.0 bits (162), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N +DD G + P L A +E ++ LL G DVN DI RT LH+AA G
Sbjct: 38 ADVNAMDDAG--VTP---LHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAATVGH 92
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
E+V +LLE GADV+ +D++G T +I N ++ ++L+K
Sbjct: 93 LEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 59.7 bits (143), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D T LH+AA +G E+V +LL+ GADV+ D WG TPL A
Sbjct: 30 VRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAAT 89
Query: 116 YKNHEVIKLLEKHGA 130
+ E++++L ++GA
Sbjct: 90 VGHLEIVEVLLEYGA 104
Score = 35.0 bits (79), Expect = 0.095, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 84 GFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
G + V +L+ GADV+ D G TPL A + E++++L KHGA
Sbjct: 25 GQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGA 71
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIA 260
L+L+ P +V A + + + + GDL L + G + +A +I
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 261 RGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRY 320
G+ ++H +++RDL+P+NIL D+ G+++++D G++ + K +P T Y
Sbjct: 303 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHG-Y 356
Query: 321 VAPEVF-KNEEYDTKVDVFSFALILQEMIEGCPPF 354
+APEV K YD+ D FS +L +++ G PF
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIA 260
L+L+ P +V A + + + + GDL L + G + +A +I
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 261 RGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRY 320
G+ ++H +++RDL+P+NIL D+ G+++++D G++ + K +P T Y
Sbjct: 303 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGTH-GY 356
Query: 321 VAPEVF-KNEEYDTKVDVFSFALILQEMIEGCPPF 354
+APEV K YD+ D FS +L +++ G PF
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIA 260
L+L+ P +V A + + + + GDL L + G + +A +I
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 261 RGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRY 320
G+ ++H +++RDL+P+NIL D+ G+++++D G++ + K +P T Y
Sbjct: 303 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGTH-GY 356
Query: 321 VAPEVF-KNEEYDTKVDVFSFALILQEMIEGCPPF 354
+APEV K YD+ D FS +L +++ G PF
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 201 LALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIA 260
L+L+ P +V A + + + + GDL L + G + +A +I
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 301
Query: 261 RGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRY 320
G+ ++H +++RDL+P+NIL D+ G+++++D G++ + K +P T Y
Sbjct: 302 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHG-Y 355
Query: 321 VAPEVF-KNEEYDTKVDVFSFALILQEMIEGCPPF 354
+APEV K YD+ D FS +L +++ G PF
Sbjct: 356 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 19/252 (7%)
Query: 162 EITKGTF-----ILAFWRGIQVAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFL 216
E+ KG F + G + A K + + +S D + R E + + ++HPN+V+
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER-EARICRLLKHPNIVRLH 69
Query: 217 GAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIH 276
++++ +V + + G+L + + + A I +N+ H N I+H
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG---IVH 126
Query: 277 RDLEPSNIL---RDDSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDT 333
RDL+P N+L + +K+ADFG++ + + T Y++PEV + + Y
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTP-GYLSPEVLRKDPYGK 185
Query: 334 KVDVFSFALILQEMIEGCPPFTMKHDNEVPKAYAARQRPPFKAPAKLY---ARGLKELIE 390
VD+++ +IL ++ G PPF D + + Y + + P+ + K+LI
Sbjct: 186 PVDMWACGVILYILLVGYPPFW---DEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 391 ECWNEKPAKRPT 402
+ PAKR T
Sbjct: 243 KMLTINPAKRIT 254
>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEH|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEH|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 157
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + ++ L A E +E ++ LL +G DVN +D
Sbjct: 6 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
D T LH+AA +G E+V +LL+ GADV+ KD+ G TPL A + E++++L K GA
Sbjct: 66 KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 125
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N D DG P L A E +E ++ LL +G DVN +D D T LH+AA +G
Sbjct: 59 ADVNAKDKDG--YTP---LHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGH 113
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
E+V +LL+ GADV+ +D++G TP AI + ++ ++L+K
Sbjct: 114 LEIVEVLLKAGADVNAQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN +D D T LH+AA +G E+V +LL+ GADV+ KD+ G TPL A
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAR 77
Query: 116 YKNHEVIKLLEKHGA------KPLMAPMHVKHARE 144
+ E++++L K GA K P+H+ ARE
Sbjct: 78 EGHLEIVEVLLKAGADVNAKDKDGYTPLHLA-ARE 111
>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|D Chain D, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 157
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N D DG P L A E +E ++ LL +G DVN +D D T LH+AA +G
Sbjct: 59 ADVNAKDKDG--YTP---LHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGH 113
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
E+V +LL+ GADV+ +D++G TP AI N ++ ++L+K
Sbjct: 114 LEIVEVLLKAGADVNAQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + ++ L A E +E ++ LL +G DVN +D
Sbjct: 6 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
D T LH+AA +G E+V +LL+ GADV+ KD+ G TPL A + E++++L K GA
Sbjct: 66 KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 125
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN +D D T LH+AA +G E+V +LL+ GADV+ KD+ G TPL A
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAR 77
Query: 116 YKNHEVIKLLEKHGA------KPLMAPMHVKHARE 144
+ E++++L K GA K P+H+ ARE
Sbjct: 78 EGHLEIVEVLLKAGADVNAKDKDGYTPLHLA-ARE 111
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 193 RVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPSTA 252
R R FR+ L Q H NV++ + + +V E + G + + + ++ A
Sbjct: 54 RSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEA 113
Query: 253 VRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN---LKVADFGVSKLLTVKED- 308
D+A +++LH I HRDL+P NIL + +K+ DFG+ + + D
Sbjct: 114 SVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDC 170
Query: 309 RPLTCQD-----TSCRYVAPEVFK--NEE---YDTKVDVFSFALILQEMIEGCPPFTMK 357
P++ + S Y+APEV + +EE YD + D++S +IL ++ G PPF +
Sbjct: 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFT---PQKTLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 105 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 160
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM
Sbjct: 161 SDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 348 I 348
+
Sbjct: 219 V 219
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 39/249 (15%)
Query: 191 DDRVRAFRDELALLQKIRHPNVVQF-------------LGAVTQSSPMMIVTEYLPKGDL 237
++++ E+ LL + H VV++ + AV + S + I EY L
Sbjct: 43 EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL 102
Query: 238 RAFLKRKGALKPSTAV-RFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKVAD 296
+ + + R I ++Y+H IIHRDL+P NI D+S N+K+ D
Sbjct: 103 YDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159
Query: 297 FGVSK-----LLTVKEDRP--------LTCQDTSCRYVAPEVFKNE-EYDTKVDVFSFAL 342
FG++K L +K D LT + YVA EV Y+ K+D++S +
Sbjct: 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGI 219
Query: 343 ILQEMIEGCPPFT--MKHDNEVPKAYAAR-QRPPFKAPAKLYARGLKELIEECWNEKPAK 399
I EMI PF+ M+ N + K + + PP K+ K++I + P K
Sbjct: 220 IFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVE--KKIIRLLIDHDPNK 274
Query: 400 RPTFRQIIT 408
RP R ++
Sbjct: 275 RPGARTLLN 283
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 9/174 (5%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVT-QSSPMMIVTEYLPKGD 236
VA+KKL + RA+R EL L++ + H N++ L T Q + YL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 237 LRAFLKR--KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
+ A L + + L + G+ +LH IIHRDL+PSNI+ LK+
Sbjct: 111 MDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKI 167
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI 348
DFG+++ T +T + Y APEV Y VD++S I+ EM+
Sbjct: 168 LDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin
Length = 166
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + ++ L A E +E ++ LL +G DVN +D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
D T LH+AA +G E+V +LL+ GADV+ KD+ G TPL A + E++++L K GA
Sbjct: 78 KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 137
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN +D D T LH+AA +G E+V +LL+ GADV+ KD+ G TPL A
Sbjct: 30 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAR 89
Query: 116 YKNHEVIKLLEKHGA------KPLMAPMHVKHARE 144
+ E++++L K GA K P+H+ ARE
Sbjct: 90 EGHLEIVEVLLKAGADVNAKDKDGYTPLHLA-ARE 123
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N D DG P L A E +E ++ LL +G DVN +D D T LH+AA +G
Sbjct: 71 ADVNAKDKDG--YTP---LHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGH 125
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLE 126
E+V +LL+ GADV+ +D++G T +I N ++ ++L+
Sbjct: 126 LEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFT---PQKTLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 105 YLVMELMDA-NLXQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 160
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM
Sbjct: 161 SDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 348 I 348
+
Sbjct: 219 V 219
>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 169
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 65/120 (54%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + + L A E ++ LL G DVN RD
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
D T LH+AA G E+V +LL+ GADV+ +D +G TPL A + E++++L KHGA
Sbjct: 78 TDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGA 137
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 23 RKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAAC 82
+ A++N D DG P L A+ +E ++ LL G DVN +D T LH+AA
Sbjct: 68 KHGADVNARDTDG--WTP---LHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAAD 122
Query: 83 QGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
+G E+V +LL+ GADV+ +D++G T +I N ++ ++L+K
Sbjct: 123 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9U|D Chain D, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9N|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9N|D Chain D, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
Length = 158
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 11 LLKQSSLAPDRERK-----EAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGID 65
LL+ ++ D E + A++N DD+G + P L A +E ++ LL +G D
Sbjct: 10 LLEAAAAGQDDEVRILMANGADVNATDDNG--LTP---LHLAAANGQLEIVEVLLKNGAD 64
Query: 66 VNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLL 125
VN D T LH+AA G E+V +LL+ GADV+ DR G TPL A E++++L
Sbjct: 65 VNASDSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVL 124
Query: 126 EKHGA 130
KHGA
Sbjct: 125 LKHGA 129
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 23 RKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAAC 82
+ A++N D G I P L A + +E ++ LL G DVN D T LH+AA
Sbjct: 60 KNGADVNASDSAG--ITP---LHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAAL 114
Query: 83 QGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLE 126
G E+V +LL+ GADV+ +D G T +I ++ ++L+
Sbjct: 115 SGQLEIVEVLLKHGADVNAQDALGLTAFDISINQGQEDLAEILQ 158
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 97
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 98 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 153
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM
Sbjct: 154 SDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211
Query: 348 I 348
+
Sbjct: 212 V 212
>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex
pdb|2V4H|D Chain D, Nemo Cc2-Lz Domain - 1d5 Darpin Complex
Length = 136
Score = 64.7 bits (156), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 63/117 (53%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + K L A+ +E ++ LL G DVN D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
D T LH+AA G E+V +LL+ GADV+ +D++G T +I N ++ ++L+K
Sbjct: 78 NDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 59.7 bits (143), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D T LH+AA E+V +LL+ GADV+ D GSTPL A
Sbjct: 30 VRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDGSTPLHLAAL 89
Query: 116 YKNHEVIKLLEKHGA 130
+ + E++++L KHGA
Sbjct: 90 FGHLEIVEVLLKHGA 104
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 98
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 99 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 154
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM
Sbjct: 155 SDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 212
Query: 348 I 348
+
Sbjct: 213 V 213
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 9/174 (5%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVT-QSSPMMIVTEYLPKGD 236
VA+KKL + RA+R EL L++ + H N++ L T Q + YL
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103
Query: 237 LRAFLKR--KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
+ A L + + L + G+ +LH IIHRDL+PSNI+ LK+
Sbjct: 104 MDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKI 160
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI 348
DFG+++ T +T + Y APEV Y VD++S I+ EM+
Sbjct: 161 LDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat
Protein
pdb|2BKG|B Chain B, Crystal Structure Of E3_19 An Designed Ankyrin Repeat
Protein
Length = 166
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 66/120 (55%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + E+ + L A +E ++ LL +G DVN D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
T LH+AA +G E+V +LL+ GADV+ D GSTPL A + E++++L K+GA
Sbjct: 78 FSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGA 137
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 29 NGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEV 88
NG D + + L A +E ++ LL G DVN D T LH+AA G E+
Sbjct: 69 NGADVNALDFSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEI 128
Query: 89 VSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLE 126
V +LL+ GADV+ +D++G T +I N ++ ++L+
Sbjct: 129 VEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 103
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 104 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 159
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM
Sbjct: 160 SDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 217
Query: 348 I 348
+
Sbjct: 218 V 218
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 98
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 99 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 154
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM
Sbjct: 155 SDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 212
Query: 348 I 348
+
Sbjct: 213 V 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 105
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 106 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 161
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM
Sbjct: 162 SDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
Query: 348 I 348
+
Sbjct: 220 V 220
>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Maltose Binding Protein
Length = 169
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 6/90 (6%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D T LH+AA G E+V +LL+ GADVD D +G TPL A Y
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 116 YKNHEVIKLLEKHGA------KPLMAPMHV 139
+ + E++++L K+GA M P+H+
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHL 119
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 62/120 (51%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + + L A +E ++ LL G DV+ D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
+ T LH+AA G E+V +LL+ GADV+ D G TPL A + E++++L KHGA
Sbjct: 78 VFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGA 137
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%)
Query: 29 NGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEV 88
+G D D ++ L A +E ++ LL +G DVN D D T LH+AA G+ E+
Sbjct: 69 HGADVDASDVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEI 128
Query: 89 VSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
V +LL+ GADV+ +D++G T +I N ++ ++L+K
Sbjct: 129 VEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 9/174 (5%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVT-QSSPMMIVTEYLPKGD 236
VA+KKL + RA+R EL L++ + H N++ L T Q + YL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 237 LRAFLKR--KGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGNLKV 294
+ A L + + L + G+ +LH IIHRDL+PSNI+ LK+
Sbjct: 111 MDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKI 167
Query: 295 ADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI 348
DFG+++ T +T + Y APEV Y VD++S I+ EM+
Sbjct: 168 LDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 105
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 106 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 161
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM
Sbjct: 162 SDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
Query: 348 I 348
+
Sbjct: 220 V 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 105 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 160
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM
Sbjct: 161 SDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 348 I 348
+
Sbjct: 219 V 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 104
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 105 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 160
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM
Sbjct: 161 SDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 348 I 348
+
Sbjct: 219 V 219
>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s
pdb|2XZT|H Chain H, Caspase-3 In Complex With Darpin-3.4_i78s
Length = 136
Score = 64.3 bits (155), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Query: 26 AELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRDIDNRTALHVAACQGF 85
A++N +DD G + P L A +E ++ LL G DVN D RT LH+AA G
Sbjct: 38 ADVNAMDDAG--VTP---LHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAATVGH 92
Query: 86 TEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEK 127
E+V +LLE GADV+ +D++G T +I N ++ ++L+K
Sbjct: 93 LEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D T LH+AA +G E+V +LL+ GADV+ D WG TPL A
Sbjct: 30 VRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAAT 89
Query: 116 YKNHEVIKLLEKHGA 130
+ E++++L ++GA
Sbjct: 90 VGHLEIVEVLLEYGA 104
Score = 34.7 bits (78), Expect = 0.097, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 84 GFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
G + V +L+ GADV+ D G TPL A + E++++L KHGA
Sbjct: 25 GQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGA 71
>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex
Length = 169
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%)
Query: 56 IKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIY 115
++ L+ +G DVN D +T LH+AA +G E+V +LL+ GADV+ D+ G TPL A
Sbjct: 30 VRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAAL 89
Query: 116 YKNHEVIKLLEKHGA 130
Y + E++++L K+GA
Sbjct: 90 YGHLEIVEVLLKNGA 104
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 65/120 (54%)
Query: 11 LLKQSSLAPDRERKEAELNGLDDDGEEIKPEFRLMFLANERDVEGIKELLDSGIDVNFRD 70
LL+ + D E + NG D + E+ + L A + +E ++ LL G DVN D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAAD 77
Query: 71 IDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGDAIYYKNHEVIKLLEKHGA 130
T LH+AA G E+V +LL+ GADV+ D +G TPL A + E++++L K+GA
Sbjct: 78 KMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGA 137
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 53 VEGIKELLDSGIDVNFRDIDNRTALHVAACQGFTEVVSLLLERGADVDPKDRWGSTPLGD 112
+E ++ LL +G DVN D T LH+AA G E+V +LL+ GADV+ +D++G T
Sbjct: 93 LEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVNAQDKFGKTAFDI 152
Query: 113 AIYYKNHEVIKLLEK 127
+I N ++ ++L+K
Sbjct: 153 SIDNGNEDLAEILQK 167
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 142
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 143 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 198
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM
Sbjct: 199 SDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
Query: 348 I 348
+
Sbjct: 257 V 257
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 15/179 (8%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVTEY 231
VA+KKL + RA+R EL L++ + H N++ L T + IV E
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME- 111
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
L +L ++ + L + G+ +LH IIHRDL+PSNI+
Sbjct: 112 LMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCT 166
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMIEG 350
LK+ DFG+++ T + + Y APEV Y VD++S I+ EMI+G
Sbjct: 167 LKILDFGLAR--TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDL 237
VA+KKL + RA+R EL L++ + H N++ L T P + E+ D+
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT---PQKTLEEF---QDV 142
Query: 238 RAFLKRKGALKPSTAVRFALDIAR----------GMNYLHENKPVPIIHRDLEPSNILRD 287
++ A ++ LD R G+ +LH IIHRDL+PSNI+
Sbjct: 143 YLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 198
Query: 288 DSGNLKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEM 347
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM
Sbjct: 199 SDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
Query: 348 I 348
+
Sbjct: 257 V 257
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 131/287 (45%), Gaps = 37/287 (12%)
Query: 148 YEIDPHELDFTNSVEITKGTFILAFWRGIQVAVKKLGE----EVI------SDDDRVRAF 197
++I +L F S + +GTF F +G++ V G+ EV+ + + +F
Sbjct: 3 HKIRNEDLIFNES--LGQGTFTKIF-KGVRREVGDYGQLHETEVLLKVLDKAHRNYSESF 59
Query: 198 RDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFA 256
+ +++ K+ H ++V G ++V E++ G L +LK+ K + + A
Sbjct: 60 FEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVA 119
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNIL--RDD---SGN---LKVADFGVSKLLTVKED 308
+A M++L EN +IH ++ NIL R++ +GN +K++D G+S +TV
Sbjct: 120 KQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS--ITV--- 171
Query: 309 RPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMIEGC-PPFTMKHDNEVPKAY 366
P +V PE +N + + D +SF L E+ G P + + Y
Sbjct: 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY 231
Query: 367 AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
R + P AP A L LI C + +P RP+FR II L S+
Sbjct: 232 EDRHQLP--APK---AAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 178 VAVKKLGEEVISDDDRVRAFRDELALLQKIRHPNVVQFLGAVTQSSPM------MIVTEY 231
VA+KKL + RA+R EL L++ + H N++ L T + IV E
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME- 103
Query: 232 LPKGDLRAFLKRKGALKPSTAVRFALDIARGMNYLHENKPVPIIHRDLEPSNILRDDSGN 291
L +L ++ + L + G+ +LH IIHRDL+PSNI+
Sbjct: 104 LMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCT 158
Query: 292 LKVADFGVSKLLTVKEDRPLTCQDTSCRYVAPEVFKNEEYDTKVDVFSFALILQEMI 348
LK+ DFG+++ T +T + Y APEV Y VD++S I+ EM+
Sbjct: 159 LKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 131/287 (45%), Gaps = 37/287 (12%)
Query: 148 YEIDPHELDFTNSVEITKGTFILAFWRGIQVAVKKLGE----EVI------SDDDRVRAF 197
++I +L F S + +GTF F +G++ V G+ EV+ + + +F
Sbjct: 3 HKIRNEDLIFNES--LGQGTFTKIF-KGVRREVGDYGQLHETEVLLKVLDKAHRNYSESF 59
Query: 198 RDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKR-KGALKPSTAVRFA 256
+ +++ K+ H ++V G ++V E++ G L +LK+ K + + A
Sbjct: 60 FEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVA 119
Query: 257 LDIARGMNYLHENKPVPIIHRDLEPSNIL--RDD---SGN---LKVADFGVSKLLTVKED 308
+A M++L EN +IH ++ NIL R++ +GN +K++D G+S +TV
Sbjct: 120 KQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS--ITV--- 171
Query: 309 RPLTCQDTSCRYVAPEVFKN-EEYDTKVDVFSFALILQEMIEGC-PPFTMKHDNEVPKAY 366
P +V PE +N + + D +SF L E+ G P + + Y
Sbjct: 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY 231
Query: 367 AARQRPPFKAPAKLYARGLKELIEECWNEKPAKRPTFRQIITRLESI 413
R + P AP A L LI C + +P RP+FR II L S+
Sbjct: 232 EDRHQLP--APK---AAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,289,691
Number of Sequences: 62578
Number of extensions: 574215
Number of successful extensions: 4868
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 194
Number of HSP's that attempted gapping in prelim test: 1354
Number of HSP's gapped (non-prelim): 1498
length of query: 447
length of database: 14,973,337
effective HSP length: 102
effective length of query: 345
effective length of database: 8,590,381
effective search space: 2963681445
effective search space used: 2963681445
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)