BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013215
(447 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana
GN=At4g11680 PE=2 SV=1
Length = 390
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 149/305 (48%), Gaps = 39/305 (12%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ ++++ L+ V V VL + R E P PL W+VGY C + + YR+ +
Sbjct: 110 VFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRR 169
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
P+ + L ++ +S+ + + + P A H NT
Sbjct: 170 HPED----GGGSGLTNSSSQQYVSLAQLEDRGETSNP-AKHLESANTM------------ 212
Query: 228 FKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGY----AMPFILC 282
F +W+++G W+ GG + ++D+P LY LCI+FL A+ ++
Sbjct: 213 -------FSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIG 265
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGG 342
+CCCLPCI++IL +A GA+ ID +P ++F + + + S G
Sbjct: 266 LAVCCCLPCIIAIL---YAVADQEGASKNDIDQMPKFRFT-----KTGNVEKLSGKARGI 317
Query: 343 VVAAGTEK--ERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPL 400
+ GT+ ER +S EDA CCICL +Y + ELRELPC+H FH C+DKWL IN+ CPL
Sbjct: 318 MTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPL 377
Query: 401 CKSEV 405
CK +
Sbjct: 378 CKFNI 382
>sp|Q9LN71|RING1_ARATH E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana
GN=At1g12760 PE=2 SV=1
Length = 408
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 27/311 (8%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ +++V L+ V A +L + R EHP PL W++GYA CV + + YR+ N+
Sbjct: 101 VVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRR 160
Query: 168 EPDSVQSRNSSARLNAPAAPF------SISVPRTSEVEDHRAPIASHRGGQNTGVLSPRF 221
+ + +R ++ ++ ++ R S V+D + G L
Sbjct: 161 TNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQD-----------LSLGHLDTES 209
Query: 222 KVLVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGY----A 276
+ ++ + A F +W+++G W+ GG A ++P +Y L IVFL A
Sbjct: 210 SSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVA 269
Query: 277 MPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSS 336
+ ++ +CCCLPCI+++L +A GA+ E I+ L +KF+ + + D +
Sbjct: 270 LACVIGIAVCCCLPCIIAVL---YAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQ 326
Query: 337 SIGDGGVVAAGTEK--ERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKI 394
+G + GT+ E + EDA CCICL+ Y + ELRELPC H FH CVDKWL I
Sbjct: 327 GTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYI 386
Query: 395 NASCPLCKSEV 405
NA+CPLCK +
Sbjct: 387 NATCPLCKYNI 397
>sp|Q8LDB8|RING2_ARATH E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana
GN=At1g63170 PE=2 SV=2
Length = 381
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 139/304 (45%), Gaps = 63/304 (20%)
Query: 132 EHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQ--------------------VSEPDS 171
E+P PL WI+GY C+ + + YR+ N + E +
Sbjct: 99 ENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEG 158
Query: 172 VQ-SRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKM 230
+ SRNS R ++E+ A H NT ++ +
Sbjct: 159 LGLSRNSDERY-----------LELGQLENENNSFAKHLESANT---------MISF--- 195
Query: 231 ALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFLAISCIGY----AMPFILCATI 285
+W+V+G W+ GG A +P LY LCIVFL A+ ++ +
Sbjct: 196 -------IWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAV 248
Query: 286 CCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGD-GGVV 344
CCCLPCI+++L +A+ GA+ E ID L +KF+ + D GD GGV+
Sbjct: 249 CCCLPCIIAVLYA---VAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVM 305
Query: 345 A-AGTEK--ERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLC 401
GT+ E + EDA CCICL+ Y + ELRELPC H FH CVDKWL INA+CPLC
Sbjct: 306 TECGTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLC 365
Query: 402 KSEV 405
K +
Sbjct: 366 KYNI 369
>sp|Q8GUU2|RIE1_ARATH E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1
PE=2 SV=1
Length = 359
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 144/311 (46%), Gaps = 50/311 (16%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLL---YWRYRQSN 164
++ +++ + V+++ V+L E P P+ WI Y C+ + L+ YWR
Sbjct: 78 VAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWR----- 132
Query: 165 QVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVL 224
RNS+ R R E DH + Q++ S + +
Sbjct: 133 ----------RNSTRR------------ARDLESYDHEDYNIEYDYEQDSDDNSTTYSFV 170
Query: 225 VEYFKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCA 283
+ F +W+++G W+ GG +APNLY L ++FLAI +L
Sbjct: 171 KRCESINTVISF-IWWIIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLAC 229
Query: 284 TI----CCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIG 339
+ CCCLPCI+++L +A T G + + LP YKF K+ SN+++ + G
Sbjct: 230 LVGIALCCCLPCIIALL---YAVAGTEGVSEAELGVLPLYKF---KAFHSNEKNIT---G 280
Query: 340 DGGVV-----AAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKI 394
G +V ER + EDA CCICL+ Y + EL LPC+H FH C+ KWLK+
Sbjct: 281 PGKMVPIPINGLCLATERTLLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKM 340
Query: 395 NASCPLCKSEV 405
A+CPLCK +
Sbjct: 341 RATCPLCKYNI 351
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 30/116 (25%)
Query: 294 SILGLREDL--AQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKE 351
++L L E L A+ RG T I+ LP+Y+F L+ +S
Sbjct: 355 ALLNLAERLGEAKPRGLTKADIEQLPSYRFNLENHQS----------------------- 391
Query: 352 RVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEVGD 407
E +C +C + + + LR LPC+H FH CVDKWLK N +CP+C+++ +
Sbjct: 392 -----EQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICRADASE 442
>sp|E9QAU8|RN165_MOUSE RING finger protein 165 OS=Mus musculus GN=Rnf165 PE=2 SV=1
Length = 347
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 17/121 (14%)
Query: 295 ILGLREDLAQ-TRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERV 353
+L L + L TRGA +I+ T+ K KK R + + G + E
Sbjct: 243 LLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKRRPQDSK--------------GKKDEGE 287
Query: 354 ISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEVGDTVLGSI 413
S D C ICL+ + +++R LPC H FH+ CVD+WL ++ CP+C+ ++ +T LG+
Sbjct: 288 ESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI-ETQLGAD 346
Query: 414 S 414
S
Sbjct: 347 S 347
>sp|Q6ZSG1|RN165_HUMAN RING finger protein 165 OS=Homo sapiens GN=RNF165 PE=1 SV=1
Length = 346
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 17/121 (14%)
Query: 295 ILGLREDLAQ-TRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERV 353
+L L + L TRGA +I+ T+ K KK R + + G + E
Sbjct: 242 LLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKRRPQDGK--------------GKKDEGE 286
Query: 354 ISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEVGDTVLGSI 413
S D C ICL+ + +++R LPC H FH+ CVD+WL ++ CP+C+ ++ +T LG+
Sbjct: 287 ESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI-ETQLGAD 345
Query: 414 S 414
S
Sbjct: 346 S 346
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 30/116 (25%)
Query: 294 SILGLREDL--AQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKE 351
++L L E L A+ RG T I+ LP+Y+F +S
Sbjct: 422 ALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQS----------------------- 458
Query: 352 RVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEVGD 407
E +C +C+ + + LR LPC+H FH CVDKWLK N +CP+C+++ +
Sbjct: 459 -----EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 509
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 30/116 (25%)
Query: 294 SILGLREDL--AQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKE 351
++L L E L A+ RG T I+ LP+Y+F +S
Sbjct: 425 ALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQS----------------------- 461
Query: 352 RVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEVGD 407
E +C +C+ + + LR LPC+H FH CVDKWLK N +CP+C+++ +
Sbjct: 462 -----EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASE 512
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 30/116 (25%)
Query: 294 SILGLREDL--AQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKE 351
++L L E L A+ RG T I+ LP+Y+F +S
Sbjct: 339 ALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS----------------------- 375
Query: 352 RVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEVGD 407
E +C +C + + LR LPC+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 -----EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 426
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 30/116 (25%)
Query: 294 SILGLREDL--AQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKE 351
++L L E L A+ RG T I+ LP+Y+F +S
Sbjct: 314 ALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS----------------------- 350
Query: 352 RVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEVGD 407
E +C +C + + LR LPC+H FH CVDKWLK N +CP+C+++ +
Sbjct: 351 -----EQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 401
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 321 FKLKKSRSSNDRD-NSSSIGDGGVVAAGTEKERVISGEDAV-------CCICLAKYANND 372
+ ++K R +N RD N +GD A R + D C +C+ Y ND
Sbjct: 216 YFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQND 275
Query: 373 ELRELPCSHFFHKDCVDKWLKINASCPLCKSEV 405
+R LPC H FHK CVD WL + +CP+CK +
Sbjct: 276 VVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNI 308
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 321 FKLKKSRSSNDRD-NSSSIGDGGVVAAGTEKERVISGEDAV-------CCICLAKYANND 372
+ ++K R +N RD N +GD A R + D C +C+ Y ND
Sbjct: 216 YFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQND 275
Query: 373 ELRELPCSHFFHKDCVDKWLKINASCPLCKSEV 405
+R LPC H FHK CVD WL + +CP+CK +
Sbjct: 276 VVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNI 308
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 30/116 (25%)
Query: 294 SILGLREDL--AQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKE 351
++L L E L A+ RG T I+ LP+Y+F +S
Sbjct: 257 ALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS----------------------- 293
Query: 352 RVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEVGD 407
E +C +C + + LR LPC+H FH CVDKWLK N +CP+C+++ +
Sbjct: 294 -----EQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 344
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 321 FKLKKSRSSNDRD-NSSSIGDGGVVAAGTEKERVISGEDAV-------CCICLAKYANND 372
+ ++K R +N RD N +GD A R + D C +C+ Y ND
Sbjct: 216 YFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQND 275
Query: 373 ELRELPCSHFFHKDCVDKWLKINASCPLCKSEV 405
+R LPC H FHK CVD WL + +CP+CK +
Sbjct: 276 VVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNI 308
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 34/134 (25%)
Query: 275 YAMPFILCATICCCLPCIVSILGLREDLAQTRGAT--AESIDALPTYKFKLKKSRSSNDR 332
Y +PF++ IC L I I +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPVHKFK---------- 232
Query: 333 DNSSSIGDGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWL 392
G E + VC ICL +Y + D+LR LPCSH +H CVD WL
Sbjct: 233 -------------KGDEYD--------VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 393 -KINASCPLCKSEV 405
K +CP+CK +V
Sbjct: 272 TKTKKTCPVCKQKV 285
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 34/134 (25%)
Query: 275 YAMPFILCATICCCLPCIVSILGLREDLAQTRGAT--AESIDALPTYKFKLKKSRSSNDR 332
Y +PF++ IC L I I +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPVHKFK---------- 232
Query: 333 DNSSSIGDGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWL 392
G E + VC ICL +Y + D+LR LPCSH +H CVD WL
Sbjct: 233 -------------KGDEYD--------VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 393 -KINASCPLCKSEV 405
K +CP+CK +V
Sbjct: 272 TKTKKTCPVCKQKV 285
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 34/134 (25%)
Query: 275 YAMPFILCATICCCLPCIVSILGLREDLAQTRGAT--AESIDALPTYKFKLKKSRSSNDR 332
Y +PF++ IC L I I +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK--------- 233
Query: 333 DNSSSIGDGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWL 392
GD E VC ICL +Y + D+LR LPCSH +H CVD WL
Sbjct: 234 ------GD----------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 393 -KINASCPLCKSEV 405
K +CP+CK +V
Sbjct: 272 TKTKKTCPVCKQKV 285
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 34/134 (25%)
Query: 275 YAMPFILCATICCCLPCIVSILGLREDLAQTRGAT--AESIDALPTYKFKLKKSRSSNDR 332
Y +PF++ IC L I I +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFK---------- 232
Query: 333 DNSSSIGDGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWL 392
G E + VC ICL +Y + D+LR LPCSH +H CVD WL
Sbjct: 233 -------------KGDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 393 -KINASCPLCKSEV 405
K +CP+CK +V
Sbjct: 272 TKTKKTCPVCKQKV 285
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 15/103 (14%)
Query: 304 QTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCCI 363
++RG I A+P +KFK K ND GV E+E ++ C +
Sbjct: 95 RSRGLDESVIRAIPIFKFK--KRYDQND----------GVFTGEGEEEEEKRSQE--CSV 140
Query: 364 CLAKYANNDELRELP-CSHFFHKDCVDKWLKINASCPLCKSEV 405
CL+++ + ++LR +P CSH FH DC+D WL+ NA+CPLC++ V
Sbjct: 141 CLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 34/134 (25%)
Query: 275 YAMPFILCATICCCLPCIVSILGLREDLAQTRGAT--AESIDALPTYKFKLKKSRSSNDR 332
Y +PF++ IC L I I +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFK---------- 232
Query: 333 DNSSSIGDGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWL 392
G E + VC ICL +Y + D+LR LPCSH +H CVD WL
Sbjct: 233 -------------KGDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 393 -KINASCPLCKSEV 405
K +CP+CK +V
Sbjct: 272 TKTKKTCPVCKQKV 285
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 34/134 (25%)
Query: 275 YAMPFILCATICCCLPCIVSILGLREDLAQTRGAT--AESIDALPTYKFKLKKSRSSNDR 332
Y +PF++ IC L I I +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFK---------- 232
Query: 333 DNSSSIGDGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWL 392
G E + VC ICL +Y + D+LR LPCSH +H CVD WL
Sbjct: 233 -------------KGDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 271
Query: 393 -KINASCPLCKSEV 405
K +CP+CK +V
Sbjct: 272 TKTKKTCPVCKQKV 285
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 273 IGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDR 332
+G + F + ++ C IL ++ L Q R + S++ L + ++R N +
Sbjct: 216 MGIFLAFFVVVSLVCL------ILLVKIKLKQRR--SQNSMNRLAVQALEKMETRKFNSK 267
Query: 333 DNSSSIGDGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWL 392
G G + + + SG + C ICL KY + +ELR +PC+H FH+ CVD WL
Sbjct: 268 SKGRREGSCGAL------DTLSSGSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWL 321
Query: 393 KINASCPLCKSEV 405
+ +CP C+ +
Sbjct: 322 LQHHTCPHCRHNI 334
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 22/102 (21%)
Query: 305 TRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCCIC 364
RG +I A+P +KFK RD V AG E + S E C +C
Sbjct: 99 NRGLDESAIRAIPVFKFK--------KRD----------VVAGEEDQSKNSQE---CSVC 137
Query: 365 LAKYANNDELRELP-CSHFFHKDCVDKWLKINASCPLCKSEV 405
L ++ +++LR +P C H FH DC+D WL+ NA+CPLC++ V
Sbjct: 138 LNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 179
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 321 FKLKKSRSSNDRD-NSSSIGDGGVVAAGTEKERVISGEDAV-------CCICLAKYANND 372
+ +++ R +N RD N +GD A + R I D C +C+ Y ND
Sbjct: 229 YYIQRFRYANARDRNQRRLGDAAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPND 288
Query: 373 ELRELPCSHFFHKDCVDKWLKINASCPLCKSEV 405
+R LPC H FHK CVD WL + +CP+CK +
Sbjct: 289 VVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNI 321
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 321 FKLKKSRSSNDRD-NSSSIGDGGVVAAGTEKERVISGEDAV-------CCICLAKYANND 372
+ +++ R +N RD N +GD A + R I D C +C+ Y ND
Sbjct: 230 YYIQRFRYANARDRNQRRLGDAAKKAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPND 289
Query: 373 ELRELPCSHFFHKDCVDKWLKINASCPLCKSEV 405
+R LPC H FHK CVD WL + +CP+CK +
Sbjct: 290 VVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNI 322
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 40/150 (26%)
Query: 263 LCIVFLAISCIGYAMPFILCATICCCLPCIV---SILGLREDLAQTR---GATAESIDAL 316
+ IV LAI FI + CCL CI I +D+ +R G E I++
Sbjct: 52 IAIVVLAI--------FISLGMVSCCLHCIFYREEIGAAGQDVLHSRARRGLEKEVIESF 103
Query: 317 PTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRE 376
PT+ + K IG GGV C ICL+++ + + LR
Sbjct: 104 PTFLYSEVKGLK---------IGKGGVE----------------CAICLSEFEDQETLRW 138
Query: 377 LP-CSHFFHKDCVDKWLKINASCPLCKSEV 405
+P CSH FH +C+D WL ++CP+C++ +
Sbjct: 139 MPPCSHTFHANCIDVWLSSWSTCPVCRANL 168
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 40/130 (30%)
Query: 276 AMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNS 335
++PF+ A L +D Q RG T E ID L T F
Sbjct: 523 SLPFLSLAQF---------FLLNEDDDDQPRGLTKEQIDNLSTRNF-------------- 559
Query: 336 SSIGDGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKIN 395
G+ + C +C+ +Y ++LR+LPCSH +H C+D+WL N
Sbjct: 560 ---GENDALK--------------TCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSEN 602
Query: 396 ASCPLCKSEV 405
++CP+C+ V
Sbjct: 603 STCPICRRAV 612
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 40/130 (30%)
Query: 276 AMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNS 335
++PF+ A L +D Q RG T E ID L T F
Sbjct: 540 SLPFLSLAQF---------FLLNEDDDDQPRGLTKEQIDNLSTRNF-------------- 576
Query: 336 SSIGDGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKIN 395
G+ + C +C+ +Y ++LR+LPCSH +H C+D+WL N
Sbjct: 577 ---GENDALK--------------TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 619
Query: 396 ASCPLCKSEV 405
++CP+C+ V
Sbjct: 620 STCPICRRAV 629
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 321 FKLKKSRSSNDRD-NSSSIGDGGVVAAGTEKERVISGEDAV-------CCICLAKYANND 372
+ +++ R +N RD N +GD A + R I D C +C+ Y ND
Sbjct: 219 YYIQRFRYANARDRNQRRLGDAAKKAISQLQVRTIRKGDQETESDFDNCAVCIEGYKPND 278
Query: 373 ELRELPCSHFFHKDCVDKWLKINASCPLCKSEV 405
+R LPC H FHK CVD WL + +CP+CK +
Sbjct: 279 VVRILPCRHLFHKCCVDPWLVDHRTCPMCKMNI 311
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 360 VCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEV 405
C +C+ +Y ++LR+LPCSH +H C+D+WL N++CP+C+ V
Sbjct: 702 TCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAV 747
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 40/130 (30%)
Query: 276 AMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNS 335
++PF+ A L +D Q RG T E ID L F
Sbjct: 501 SLPFLSLAQF---------FLLNEDDEDQPRGLTKEQIDNLAMRSF-------------- 537
Query: 336 SSIGDGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKIN 395
G+ + C +C+ +Y ++LR+LPCSH +H C+D+WL N
Sbjct: 538 ---GENDALK--------------TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 580
Query: 396 ASCPLCKSEV 405
++CP+C+ V
Sbjct: 581 STCPICRRAV 590
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 295 ILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVI 354
+L +D + RG T E ID L T + E +
Sbjct: 593 LLNESDDDDRIRGLTKEQIDNLSTRHY---------------------------EHNSID 625
Query: 355 SGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEV 405
S +C +C++ Y ++LR+LPC H FH C+D+WL N +CP+C+ V
Sbjct: 626 SELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 676
>sp|Q9LT17|BBR_ARATH E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana
GN=BBR PE=2 SV=1
Length = 340
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 27/108 (25%)
Query: 304 QTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCCI 363
++RG +A++I +LP+ ++K + DN + G + C I
Sbjct: 258 ESRGLSADTIASLPSKRYK--------EGDNQN-------------------GTNESCVI 290
Query: 364 CLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEVGDTVLG 411
C Y ++++L LPC H +H +C++ WLKIN CP+C +EV + G
Sbjct: 291 CRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTSG 338
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 360 VCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEV 405
C +C+ +Y ++LR+LPCSH +H C+D+WL N++CP+C+ V
Sbjct: 569 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 614
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 36/134 (26%)
Query: 306 RGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCCICL 365
RG AE+I+ PT+ + K+ IG GGV C +CL
Sbjct: 105 RGLDAEAIETFPTFLYSEVKA---------VRIGKGGVE----------------CAVCL 139
Query: 366 AKYANNDELRELP-CSHFFHKDCVDKWLKINASCPLCKSEV-------GDTVLGSISGAN 417
++ +++ LR +P C H FH DCVD WL +++CPLC++++ D S SG +
Sbjct: 140 CEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADLVLNQQGDDDDSTESYSGTD 199
Query: 418 ARILGSISGTNDSQ 431
G+IS + D +
Sbjct: 200 P---GTISSSTDPE 210
>sp|Q8L649|BB_ARATH E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1
SV=1
Length = 248
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 25/102 (24%)
Query: 304 QTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCCI 363
++RG + E I+ LPT K+K G + + ER C I
Sbjct: 165 ESRGLSQELIETLPTKKYKF-----------------GSIFSRKRAGER--------CVI 199
Query: 364 CLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEV 405
C KY + LPC H +H +C+ KWL IN CP+C SEV
Sbjct: 200 CQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241
>sp|Q9SKK8|ATL22_ARATH RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2
SV=2
Length = 377
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 334 NSSSIGDGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELP-CSHFFHKDCVDKWL 392
+ S+I V G + D VC ICL++YA + +R LP C H FH +C+D WL
Sbjct: 300 DESTIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWL 359
Query: 393 KINASCPLCKS 403
K+++SCP+C+S
Sbjct: 360 KLHSSCPVCRS 370
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 61/139 (43%), Gaps = 26/139 (18%)
Query: 273 IGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSN-- 330
+G + F + ++ C + I L R ++++ + T KFK K S
Sbjct: 128 MGIFLAFFVVVSLVCLILLIKIKLKQRRSQNSMNRMAVQALEKMETRKFKAKGKVSREGS 187
Query: 331 ----DRDNSSSIGDGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKD 386
D +SSSI D C ICL KY + +ELR +PC+H FHK
Sbjct: 188 CGGLDTLSSSSISD--------------------CAICLEKYIDGEELRVIPCTHRFHKR 227
Query: 387 CVDKWLKINASCPLCKSEV 405
CVD WL N +CP C+ +
Sbjct: 228 CVDPWLLQNHTCPHCRHNI 246
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 294 SILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEK--- 350
++ L D T + E I+ALP +K+K+ D +N S+ ++ EK
Sbjct: 143 TLRALDSDNVSTTSMSEEEINALPVHKYKVL------DPENGCSLAKQASTSSSAEKMLD 196
Query: 351 ---ERVISGEDAVCC-ICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCK 402
E ED + C +CL + + +R LPC H FH C+D WL+ +CP+CK
Sbjct: 197 SANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCK 252
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 27/100 (27%)
Query: 306 RGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCCICL 365
RG T E ID L T + E++ V S VC +C+
Sbjct: 586 RGLTKEQIDNLSTRSY---------------------------EQDGVDSELGKVCSVCI 618
Query: 366 AKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEV 405
+ Y ++LR+LPC H FH C+D+WL N +CP+C+ V
Sbjct: 619 SDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPV 658
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 361 CCICLAKYANNDELRELP-CSHFFHKDCVDKWLKINASCPLCKSEV 405
C +CLA++A++DELR LP C H FH DC+D WL +CPLC++ +
Sbjct: 133 CAVCLAEFADSDELRVLPACCHVFHPDCIDPWLAAAVTCPLCRANL 178
>sp|Q5SPX3|RN215_MOUSE RING finger protein 215 OS=Mus musculus GN=Rnf215 PE=2 SV=1
Length = 379
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 29/45 (64%)
Query: 361 CCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEV 405
C +CL + N LR LPC H FH+DCVD WL + +CPLCK V
Sbjct: 327 CAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNV 371
>sp|Q9Y6U7|RN215_HUMAN RING finger protein 215 OS=Homo sapiens GN=RNF215 PE=2 SV=2
Length = 377
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 29/45 (64%)
Query: 361 CCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEV 405
C +CL + N LR LPC H FH+DCVD WL + +CPLCK V
Sbjct: 325 CAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNV 369
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 357 EDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEV 405
E+ C IC+ + ND++ +LPC H+FH++C+ WL++N +C +C++ V
Sbjct: 392 EEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICRAPV 440
>sp|Q8WVZ7|RN133_HUMAN E3 ubiquitin-protein ligase RNF133 OS=Homo sapiens GN=RNF133 PE=2
SV=1
Length = 376
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 326 SRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHK 385
R + D N+ VV G E+ I+ C IC +Y ND +R L C HFFHK
Sbjct: 224 QRLTTDLQNTFGQLQLRVVKEGDEE---INPNGDSCVICFERYKPNDIVRILTCKHFFHK 280
Query: 386 DCVDKWLKINASCPLCKSEV 405
+C+D W+ + +CP+CK ++
Sbjct: 281 NCIDPWILPHGTCPICKCDI 300
>sp|Q08D68|ZNRF3_XENTR E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis GN=znrf3
PE=2 SV=1
Length = 853
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 361 CCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEV 405
C ICL KY + +ELR +PC+H FHK CVD WL N +CP C+ +
Sbjct: 266 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNI 310
>sp|Q80U04|PJA2_MOUSE E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1
SV=2
Length = 707
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 274 GYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRD 333
G+A + I P ++ + L E LAQ A ++ L + ++ + ++
Sbjct: 554 GFADGLGVAEAISYVDPQFLTYMALEERLAQ---AMETALAHLESLAVDVEVANPPASKE 610
Query: 334 NSSSIGDGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLK 393
+ + + V+ ++ G++ C IC ++Y +D ELPC HFFHK CV WL+
Sbjct: 611 SIDGLPETLVL-----EDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQ 665
Query: 394 INASCPLCKSEVGDTVLGSISGANARILGSISGTNDS 430
+ +CP+C+ V+ + + A++ S ND+
Sbjct: 666 KSGTCPVCRRHFPPAVIDASAAASSDPDPDASPANDN 702
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 361 CCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEVGDTVLGS 412
C ICL KY + +ELR +PC+H FHK CVD WL + +CP C+ + D G+
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNIIDQKKGN 318
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 343 VVAAGTEKERVISGEDAVCCICLAKYANNDELRELP-CSHFFHKDCVDKWLKINASCPLC 401
V A + KE I +D C ICL + +++ +R LP C+H FH DC+D WL +A+CP+C
Sbjct: 106 VFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVC 165
Query: 402 KSEV 405
+S +
Sbjct: 166 RSNL 169
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,186,369
Number of Sequences: 539616
Number of extensions: 6699451
Number of successful extensions: 20678
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 193
Number of HSP's that attempted gapping in prelim test: 19875
Number of HSP's gapped (non-prelim): 831
length of query: 447
length of database: 191,569,459
effective HSP length: 121
effective length of query: 326
effective length of database: 126,275,923
effective search space: 41165950898
effective search space used: 41165950898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)