BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013216
(447 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q99JW2|ACY1_MOUSE Aminoacylase-1 OS=Mus musculus GN=Acy1 PE=1 SV=1
Length = 408
Score = 363 bits (931), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/411 (45%), Positives = 251/411 (61%), Gaps = 19/411 (4%)
Query: 25 KSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWP 84
+S+ + FR YL+I T QPNPDY A F+ +A L L Q +E + +L WP
Sbjct: 7 ESEHPSVTLFRQYLRICTVQPNPDYGGAITFLEERARQLGLSCQKIEVVPGFVITVLTWP 66
Query: 85 GSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIR 144
G+NP LPSILLNSHTDVVP W H PF A DS+G I+ARGSQDMK V +QYLEA+R
Sbjct: 67 GTNPSLPSILLNSHTDVVPVFKEHWHHDPFEAFKDSEGYIYARGSQDMKSVSIQYLEAVR 126
Query: 145 RLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRA 204
RLK+ G + R+++++FVPDEE+GGH G E F F +L G LDEGLA+ T+ +
Sbjct: 127 RLKSEGHRFPRTIHMTFVPDEEVGGHKGMELFVKRPEFQALRAGFALDEGLANPTDAFTV 186
Query: 205 FYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAG--LKAE 262
FY+ER PWW+ + + G PGH ++ +++A E L K I S+ FR + ++A LK E
Sbjct: 187 FYSERSPWWVRVTSTGKPGHASRFIEDTAAEKLHKVISSILAFREKERQRLQANPHLK-E 245
Query: 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASR 322
G V SVN+ L+ G N+ P+ A FD RV P D ++ E+++ A
Sbjct: 246 GAVTSVNLTKLEGGV------AYNVVPATMSASFDFRVAPDVDMKAFEKQLQRWCQEAGE 299
Query: 323 NMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDA 382
+TFE Q KF P +T TD S+PWW A + N L +PEIFPA+TD+
Sbjct: 300 GVTFEFAQ---------KFTEPRMTPTDDSDPWWAAFSGACKAMNLTL-EPEIFPAATDS 349
Query: 383 RYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433
RY R G+PA+GFSPM TP+LLHDHNE L++ +L+G+DIY ++ A AS
Sbjct: 350 RYIRAVGIPALGFSPMNRTPVLLHDHNERLHEDIFLRGVDIYTGLLSALAS 400
>sp|Q6AYS7|ACY1A_RAT Aminoacylase-1A OS=Rattus norvegicus GN=Acy1a PE=1 SV=1
Length = 408
Score = 362 bits (928), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 184/411 (44%), Positives = 254/411 (61%), Gaps = 19/411 (4%)
Query: 25 KSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWP 84
+S+ + FR YL+I T QPNPDY +A F+ +A L L Q +E A + +L WP
Sbjct: 7 ESEHPSVTLFRQYLRICTVQPNPDYGSAVTFLEERARQLGLSCQKIEVAPGYVITVLTWP 66
Query: 85 GSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIR 144
G+NP L SILLNSHTDVVP W H PF A DS+G I+ARG+QDMK V +QYLEA+R
Sbjct: 67 GTNPLLHSILLNSHTDVVPVFKEHWHHDPFEAFKDSEGYIYARGAQDMKSVSIQYLEAVR 126
Query: 145 RLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRA 204
RLK+ G + R+++++FVPDEE+GGH G E F F +L G LDEGLA+ T+ +
Sbjct: 127 RLKSEGHRFPRTIHMTFVPDEEVGGHKGMELFVKRPEFQALRAGFALDEGLANPTDAFTV 186
Query: 205 FYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAG--LKAE 262
FY+ER PWW+ + + G PGH ++ +++A E L K + S+ FR + ++A LK E
Sbjct: 187 FYSERSPWWIRVTSTGKPGHASRFIEDTAAEKLHKVVNSILAFREKERQRLQANPHLK-E 245
Query: 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASR 322
G V SVN+ L+ G N+ P+ A FD RV P D ++ E+++ A
Sbjct: 246 GAVTSVNLTKLEGGV------AYNVVPATMSACFDFRVAPDVDMKAFEKQLQSWCQEAGE 299
Query: 323 NMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDA 382
+TFE Q KF P +T TD ++PWW A ++ N L +PEIFPA+TD+
Sbjct: 300 GVTFEFAQ---------KFTEPRMTPTDDTDPWWAAFSGACKEMNLTL-EPEIFPAATDS 349
Query: 383 RYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433
RY R G+PA+GFSPM TP+LLHDHNE L++A +L+G+DIY ++ A AS
Sbjct: 350 RYIRAVGIPALGFSPMNRTPVLLHDHNERLHEAVFLRGVDIYTRLVAALAS 400
>sp|Q6PTT0|ACY1B_RAT Aminoacylase-1B OS=Rattus norvegicus GN=Acy1b PE=1 SV=1
Length = 408
Score = 362 bits (928), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 181/405 (44%), Positives = 248/405 (61%), Gaps = 19/405 (4%)
Query: 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQL 90
+ FR YL+I T QP PDY A F A L L Q +E A + +L WPG+NP L
Sbjct: 13 VTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTL 72
Query: 91 PSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASG 150
SILLNSHTDVVP WSH PF A DS+G I+ RG+QDMKCV +QYLEA++RLK G
Sbjct: 73 SSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYTRGAQDMKCVSIQYLEAVKRLKVEG 132
Query: 151 FQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERC 210
+ R+++++FVPDEE+GGH G E F H F++L G LDEGLA+ T+ + FY+ER
Sbjct: 133 HRFPRTIHMTFVPDEEVGGHQGMELFVQRHEFHALRAGFALDEGLANPTDAFTVFYSERS 192
Query: 211 PWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAG--LKAEGEVVSV 268
PWW+ + + G PGH ++ +++A E L K + S+ FR ++ +++ LK EG V SV
Sbjct: 193 PWWVRVTSTGRPGHASRFMEDTAAEKLHKVVNSILAFREKEWQRLQSNPHLK-EGSVTSV 251
Query: 269 NMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEL 328
N+ L+ G N+ P+ A FD RV P D ++ E ++ A +TFE
Sbjct: 252 NLTKLEGGV------AYNVVPATMSACFDFRVAPDVDMKAFEEQLQSWCQEAGEGVTFEF 305
Query: 329 GQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRER 388
Q KF P +T TD ++PWW A ++ L +PEIFPA+TD+RY R
Sbjct: 306 AQ---------KFTEPRMTPTDDTDPWWAAFSGACKEMTLTL-EPEIFPAATDSRYIRAV 355
Query: 389 GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433
G+PA+GFSPM TP+LLHDHNE L++A +L+G+DIY ++ A AS
Sbjct: 356 GIPALGFSPMNRTPVLLHDHNERLHEAVFLRGVDIYTRLVAALAS 400
>sp|Q55DP8|ACY1_DICDI Aminoacylase-1 OS=Dictyostelium discoideum GN=acy1 PE=2 SV=1
Length = 408
Score = 351 bits (901), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 180/402 (44%), Positives = 249/402 (61%), Gaps = 20/402 (4%)
Query: 34 FRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSI 93
FR +L+I T P PDY +++KF++ +A+ ++ + P++L+K G P L ++
Sbjct: 13 FREFLKIRTDHPTPDYESSTKFLVEKAKEYNIPYEVYR-ETGTPIVLMKIEGLEPNLKTV 71
Query: 94 LLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQP 153
LLNSH DVVP+ W PF A D GNIF RG+QDMKCV MQ+LE RR+ SG +
Sbjct: 72 LLNSHVDVVPAVHDSWKVDPFSAWKDESGNIFGRGTQDMKCVCMQFLEVARRIVQSGQKL 131
Query: 154 VRSVYLSFVPDEEIGGH-DGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPW 212
R+++LSFVPDEEIGG G EKF + F LN+G+ LDEGLAS T D+ FY ER PW
Sbjct: 132 KRTLHLSFVPDEEIGGSGKGMEKFVYTEKFRQLNIGLCLDEGLASPTNDFTVFYGERAPW 191
Query: 213 WLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGL----KAEGEVVSV 268
W+ I A G GHG++ + +A+E L ++I + FR QF+ + G K G+V S+
Sbjct: 192 WVHITAVGNAGHGSRFIEGTAIEKLMRTINKMLAFRQEQFESLHHGQHECGKKLGDVTSL 251
Query: 269 NMAFLKAGTP--SPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTF 326
N+ LKAG P N F N+ P++AEAGFDIR+PPT + + +I +EW A ++F
Sbjct: 252 NLTVLKAGIPIDHSNNFSYNVIPTQAEAGFDIRIPPTVNLDQFLDQI-KEWT-AEEGLSF 309
Query: 327 ELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFR 386
+ + + +T DS N WW +E+ +K + L EIFPA+TD+R+ R
Sbjct: 310 KFASYIPKNE---------MTKLDSDNKWWENFKESCKKMDINL-VTEIFPAATDSRFIR 359
Query: 387 ERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESII 428
G+PA GFSP+ NTPILLHDHNEFLN+ YL+GIDI+ II
Sbjct: 360 NLGIPAFGFSPINNTPILLHDHNEFLNEKVYLRGIDIFMGII 401
>sp|Q03154|ACY1_HUMAN Aminoacylase-1 OS=Homo sapiens GN=ACY1 PE=1 SV=1
Length = 408
Score = 351 bits (900), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 179/405 (44%), Positives = 244/405 (60%), Gaps = 19/405 (4%)
Query: 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQL 90
+ FR YL+I T QP PDY A F A L L Q +E A + +L WPG+NP L
Sbjct: 13 VTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTL 72
Query: 91 PSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASG 150
SILLNSHTDVVP WSH PF A DS+G I+ARG+QDMKCV +QYLEA+RRLK G
Sbjct: 73 SSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEG 132
Query: 151 FQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERC 210
+ R+++++FVPDEE+GGH G E F F++L G LDEG+A+ T+ + FY+ER
Sbjct: 133 HRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALDEGIANPTDAFTVFYSERS 192
Query: 211 PWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAG--LKAEGEVVSV 268
PWW+ + + G PGH ++ +++A E L K + S+ FR ++ +++ LK EG V SV
Sbjct: 193 PWWVRVTSTGRPGHASRFMEDTAAEKLHKVVNSILAFREKEWQRLQSNPHLK-EGSVTSV 251
Query: 269 NMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEL 328
N+ L+ G N+ P+ A FD RV P D ++ E ++ A +T E
Sbjct: 252 NLTKLEGGV------AYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEGVTLEF 305
Query: 329 GQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRER 388
Q K+ P +T TD SNPWW + N L +PEI PA+TD RY R
Sbjct: 306 AQ---------KWMHPQVTPTDDSNPWWAAFSRVCKDMNLTL-EPEIMPAATDNRYIRAV 355
Query: 389 GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433
G+PA+GFSPM TP+LLHDH+E L++A +L+G+DIY ++ A AS
Sbjct: 356 GVPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALAS 400
>sp|Q5RFB0|ACY1_PONAB Aminoacylase-1 OS=Pongo abelii GN=ACY1 PE=2 SV=2
Length = 408
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 177/405 (43%), Positives = 244/405 (60%), Gaps = 19/405 (4%)
Query: 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQL 90
+ FR YL+I T QP PDY A F +A L L Q +E A + +L WPG+NP L
Sbjct: 13 VTLFRQYLRIRTVQPKPDYGAAVAFFEERARQLGLGCQKVEVAPGYVVTVLTWPGTNPTL 72
Query: 91 PSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASG 150
SILLNSHTDVVP WSH PF A DS+G I+ARG+QDMKC+ +QYLEA+RRLK G
Sbjct: 73 SSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCISIQYLEAVRRLKVEG 132
Query: 151 FQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERC 210
+ R+++++FVPDEE+GGH G E F F++L G LDEG+A+ T+ + FY+ER
Sbjct: 133 HRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALDEGIANPTDAFTVFYSERS 192
Query: 211 PWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAG--LKAEGEVVSV 268
PWW+ + + G PGH ++ +++A E L K + S+ FR ++ +++ LK EG V SV
Sbjct: 193 PWWVRVTSTGRPGHASRFMEDTAAEKLHKVVSSILAFREKEWQRLQSNPHLK-EGSVTSV 251
Query: 269 NMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEL 328
N+ L+ G N+ P+ A FD RV P D ++ E ++ A +T E
Sbjct: 252 NLTKLEGGV------AYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEGVTLEF 305
Query: 329 GQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRER 388
Q K+ P +T TD SNPWW + L +PEI PA+TD RY R
Sbjct: 306 AQ---------KWMHPQVTPTDDSNPWWAAFSRVCKDMKLTL-EPEIMPAATDNRYIRAV 355
Query: 389 GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433
G+PA+GFSPM TP+LLHDH+E L++A +L+G+DIY ++ A AS
Sbjct: 356 GIPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALAS 400
>sp|P37111|ACY1_PIG Aminoacylase-1 OS=Sus scrofa GN=ACY1 PE=1 SV=2
Length = 407
Score = 348 bits (892), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 176/403 (43%), Positives = 238/403 (59%), Gaps = 16/403 (3%)
Query: 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQL 90
+ FR YL+I T QP PDY A F+ +A L L Q +E + +L WPG+NP L
Sbjct: 13 VTLFRQYLRIRTVQPEPDYGAAVAFLEERARQLGLGCQKVEVVPGHVVTVLTWPGTNPTL 72
Query: 91 PSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASG 150
SILLNSHTDVVP WSH PF D+ G I+ RG+QDMKCV +QYLEA+RRLK G
Sbjct: 73 SSILLNSHTDVVPVFKEHWSHDPFEGFKDADGYIYGRGAQDMKCVSIQYLEAVRRLKVEG 132
Query: 151 FQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERC 210
R+++++FVPDEE+GGH G E F F +L G LDEGLAS T+ + FY+ER
Sbjct: 133 HHFPRTIHMTFVPDEEVGGHQGMELFVKRPEFQALRAGFALDEGLASPTDAFTVFYSERS 192
Query: 211 PWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNM 270
PWWL + + G PGHG++ +++A E L K I S+ FR + +++ G V SVN+
Sbjct: 193 PWWLRVTSTGKPGHGSRFIEDTAAEKLHKVINSILAFREKEKQRLQSNQLKPGAVTSVNL 252
Query: 271 AFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQ 330
L+ G N+ P+ A FD RV P D ++ E ++ A +TFE Q
Sbjct: 253 TMLEGGV------AYNVVPATMSACFDFRVAPDVDLKAFEEQLQSWCQAAGEGVTFEFVQ 306
Query: 331 FKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGL 390
K+ +T+TD S+PWW + L + EI PASTDARY R G+
Sbjct: 307 ---------KWMETQVTSTDDSDPWWAAFSGVFKDMKLAL-ELEICPASTDARYIRAAGV 356
Query: 391 PAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433
PA+GFSPM +TP+LLHDH+E L++A +L+G+DIY ++ A AS
Sbjct: 357 PALGFSPMNHTPVLLHDHDERLHEAVFLRGVDIYTQLLSALAS 399
>sp|Q55DL1|CBPS1_DICDI Probable carboxypeptidase S-like 1 OS=Dictyostelium discoideum
GN=DDB_G0270582 PE=3 SV=1
Length = 485
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 164/389 (42%), Gaps = 58/389 (14%)
Query: 75 NKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKC 134
NK +L +W GS+ L +LLNSH DVVP S+W+ +P+G NI+ RGS D K
Sbjct: 88 NKYSLLFEWTGSDKTLKPLLLNSHYDVVPVTESEWTFNPWGE--IRNDNIYGRGSIDNKV 145
Query: 135 VGMQYLEAIRRLKASGF-QPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDE 193
+ M +E+I + A+ + QP+R++YL F DEE+GG +G A N + + DE
Sbjct: 146 IVMATMESIEAILANNYTQPIRTIYLCFGHDEELGGLNGHRMIARHFRENLVRAEAIFDE 205
Query: 194 GLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFD 253
G ++ + + +I G G Y ++ N F ++ ++
Sbjct: 206 GCPFLASNFVPGFHD------IIAGVGVFEKGYLFYKLTSKVNSFTH-SAIPPKESAIGI 258
Query: 254 LVKAGLKAE---------------------GEVVSVNMAFLKAGTPSPNGFVM------- 285
L KA K E GE + N FL A T + M
Sbjct: 259 LSKALAKIESNPFAPIENIEKKNQLLQLFNGETIKSN-PFLDAMTKTTTALSMIHAGTKP 317
Query: 286 NLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPI 345
N+ P+ A A R+ E ++ RI++ +T E+ F + + + P
Sbjct: 318 NIIPTTASAWVSHRIINGNSIEYVKSRILD--LINDTRITMEIEGFLEPSPI----SSPF 371
Query: 346 LTATDSSNPWWNLLEEAVRKANGKLG---KPEIFPASTDARYFRERGLPAIGFSPMANT- 401
TA + +L++ + + G P A+TD R++ + F P+
Sbjct: 372 TTA-------YQILKQTIYQQFGGYNVKVVPTQLMANTDTRHYWDITDNIYRFMPIVGNF 424
Query: 402 --PILLHDHNEFLNQAEYLKGIDIYESII 428
+ +H NE ++ +Y+K I Y+ +I
Sbjct: 425 MDFVSIHGSNEKISIDDYIKTIHFYKKLI 453
>sp|Q55FR8|CBPS2_DICDI Probable carboxypeptidase S-like 2 OS=Dictyostelium discoideum
GN=DDB_G0267984 PE=3 SV=1
Length = 519
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 71/121 (58%), Gaps = 7/121 (5%)
Query: 79 ILLKWPGSNPQLPSILLNSHTDVVPSE-PSKWSHHPFGAHLDSQGNIFARGSQDMKCVGM 137
++ W G + L ILL H DVVP+ KW+H PF H+D I+ RG+ D K M
Sbjct: 132 LVYNWKGLDESLKPILLAGHIDVVPTLFLDKWTHPPFSGHIDDT-YIWGRGTMDDKGSVM 190
Query: 138 QYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVG---IVLDEG 194
LE++ L + GF+P RS+Y +F DEE+GG++GA F + F++ +G +LDEG
Sbjct: 191 AILESVEDLLSQGFKPQRSIYFAFGHDEELGGNNGA--FNINKYFDTNEIGPFEFILDEG 248
Query: 195 L 195
L
Sbjct: 249 L 249
>sp|Q08BT9|P20D1_XENTR Probable carboxypeptidase PM20D1 OS=Xenopus tropicalis GN=pm20d1
PE=2 SV=1
Length = 512
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 80 LLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQY 139
L K GS+ L +L +H DVVP+ P W PF + G I+ RG+ D K +
Sbjct: 116 LFKVQGSDHNLLPYMLLAHIDVVPAPPESWEVPPFSGE-ERDGYIYGRGTLDDKNCVIGI 174
Query: 140 LEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLA 196
L+++ L G +P RS Y+ DEEI GH GA+K + + + VLDEGLA
Sbjct: 175 LQSLEFLLKRGHKPRRSFYIGLGHDEEISGHKGAQKIVEKLQSQGVKLAFVLDEGLA 231
>sp|P27614|CBPS_YEAST Carboxypeptidase S OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=CPS1 PE=1 SV=2
Length = 576
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 22/190 (11%)
Query: 79 ILLKWPGSNPQLPSILLNSHTDVVPSEP---SKWSHHPFGAHLDSQGN-IFARGSQDMKC 134
+L W GS+P L +LL +H DVVP S W PF H D + + ++ RGS D K
Sbjct: 149 LLYTWEGSDPDLKPLLLMAHQDVVPVNNETLSSWKFPPFSGHYDPETDFVWGRGSNDCKN 208
Query: 135 VGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGA--------EKFADSHVFNSLN 186
+ + EAI +L GF+P R++ +S DEE G GA E++ D +++ ++
Sbjct: 209 LLIAEFEAIEQLLIDGFKPNRTIVMSLGFDEEASGTLGAASLASFLHERYGDDGIYSIID 268
Query: 187 VGIVLDEGLASTTEDY---RAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIES 243
G EG+ +D AE+ + G GH + D++ + + E
Sbjct: 269 EG----EGIMEVDKDVFVATPINAEKGYVDFEVSILGHGGHSSVPPDHTTIG---IASEL 321
Query: 244 VRRFRASQFD 253
+ F A+ FD
Sbjct: 322 ITEFEANPFD 331
>sp|Q2W0E7|DAPE_MAGSA Succinyl-diaminopimelate desuccinylase OS=Magnetospirillum
magneticum (strain AMB-1 / ATCC 700264) GN=dapE PE=3
SV=1
Length = 379
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 159/393 (40%), Gaps = 40/393 (10%)
Query: 46 NPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105
P+ A + E L + A P I + + P++ HTDVVP
Sbjct: 20 TPEDAGALDVLAGALEELGFACHHIRSATGGPEIRNLYARLGTEAPNLCFAGHTDVVP-- 77
Query: 106 PSK-WSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPD 164
P K W+ PF A +D QG +F RGS DMK ++ A+ RL G P S+ L D
Sbjct: 78 PGKGWTVEPFAAGID-QGRLFGRGSADMKGAIACFVAAVARLLEDG-APKGSLSLLITGD 135
Query: 165 EEIGGHDGAEKFAD--SHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAP 222
EE DG K D + ++ IV + D R + G
Sbjct: 136 EEGPAVDGTVKVLDWLAARGERIDCCIVGEPTNPRKLGDMMKI-GRRGSLNCRLTVFGTQ 194
Query: 223 GHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNG 282
GH A Y + A + + ++ +RR + D +A ++ + + G P+
Sbjct: 195 GHSA--YPHLADNPIPRLLDILRRLTEAPLDEGTPHFQAS----TLALTTVDVGNPA--- 245
Query: 283 FVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFG 342
N+ P+EA AGF+IR SLER I + A A + ++ + G
Sbjct: 246 --TNVIPAEARAGFNIRFNDLHSGASLERWIRDTVAQAGGEVEIKV----------EVSG 293
Query: 343 RPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPA--STDARYFRERGLPAIGFSPMAN 400
LT + + + L EA + G +PE+ + ++DAR+ + P + F +
Sbjct: 294 ESFLTPPGALS---DALAEAAFEVTGL--RPELSTSGGTSDARFIKNH-CPVVEFGLVGQ 347
Query: 401 TPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433
T +H +E ++ A+ +IY ++ A+
Sbjct: 348 T---MHKSDEHVSVADMEALTEIYRRVLVRLAA 377
>sp|Q8C165|P20D1_MOUSE Probable carboxypeptidase PM20D1 OS=Mus musculus GN=Pm20d1 PE=2
SV=1
Length = 503
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 143/366 (39%), Gaps = 57/366 (15%)
Query: 80 LLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQY 139
L GS+P L +L +H DVVP+ W PF L+ G I+ RG+ D K M
Sbjct: 107 LFTIQGSDPSLQPYMLMAHIDVVPAPEEGWEVPPFSG-LERNGFIYGRGALDNKNSVMAI 165
Query: 140 LEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLD------E 193
L A+ L + P RS +++ DEE+ G GA+K + + + ++D E
Sbjct: 166 LHALELLLIRNYSPKRSFFIALGHDEEVSGEKGAQKISALLQARGVQLAFLVDEGSFILE 225
Query: 194 GLASTTEDYRAFYA--ERCPWWLVIKARGAPGH---------------GAKLYDNSAMEN 236
G E A + E+ L+++ PGH + + M N
Sbjct: 226 GFIPNLEKPVAMISVTEKGALDLMLQVNMTPGHSSAPPKETSIGILSAAVSRLEQTPMPN 285
Query: 237 LFKS--IESVRRFRASQF----DLVKAGLKAEGEVVS-------VNMAFLKAGTPSP--- 280
+F ++ + A++F ++V L +VS + A ++ T
Sbjct: 286 MFGGGPLKKTMKLLANEFSFPINIVLRNLWLFHPIVSRIMERNPITNALVRTTTALTMFN 345
Query: 281 NGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLH-- 338
G +N+ P A+A + R+ P+ + V E +N + R LH
Sbjct: 346 AGIKVNVIPPLAQATINCRIHPS--------QTVHEVLELVKNTVAD-----DRVQLHVL 392
Query: 339 DKFGRPILTATDSSNPWWNLLEEAVRKA--NGKLGKPEIFPASTDARYFRERGLPAIGFS 396
F ++ +D + LL+E +R + P I A+TD R++ F+
Sbjct: 393 RSFEPLPISPSDDQAMGYQLLQETIRSVFPEVDIVVPGICIANTDTRHYANITNGMYRFN 452
Query: 397 PMANTP 402
P+ P
Sbjct: 453 PLPLNP 458
>sp|P0C155|CBPS2_YEAST Putative carboxypeptidase YOL153C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YOL153C PE=5 SV=1
Length = 581
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 31 IERFRAYLQIDTS------QPNPDYTNASKFILAQA---EALSLESQTLEFAK-NKPLIL 80
I + +QI T PN D S+F E L L+ K N+ +L
Sbjct: 93 IRKLSGAIQIPTEISDTNPLPNDDPEYYSEFFKLHKYFEETFPLVHSHLKVEKVNQLGLL 152
Query: 81 LKWPGSNPQLPSILLNSHTDVVPSEP---SKWSHHPFGAHLDSQGN-IFARGSQDMKCVG 136
W G++P L IL +H DVVP W + P H D + + ++ RGS D K +
Sbjct: 153 YTWEGTDPSLKPILFMAHQDVVPVNREIWDSWQYPPLSGHYDQETDYVWGRGSNDCKNLM 212
Query: 137 MQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFA 177
+ LE I +L A G+Q R+V LS DEE G GA+ A
Sbjct: 213 LAELEGIEQLLADGYQTERTVILSLGFDEESSGFMGAKVLA 253
>sp|A1U3R0|DAPE_MARAV Succinyl-diaminopimelate desuccinylase OS=Marinobacter aquaeolei
(strain ATCC 700491 / DSM 11845 / VT8) GN=dapE PE=3 SV=1
Length = 376
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 153/401 (38%), Gaps = 69/401 (17%)
Query: 47 PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP 106
PD + ++++ L + L F + L W P + HTDVVP+ P
Sbjct: 21 PDDAGCQELMMSRLAPLGFSGENLRFGETDNL----WARKGNNGPVLAFAGHTDVVPTGP 76
Query: 107 SK-WSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDE 165
K W+H PF + G + RG+ DMK ++ A R A+ S+ L DE
Sbjct: 77 EKNWAHPPFDP-IIKDGYLHGRGAADMKGSLAAFITACERFVANHPNHRGSIALLITSDE 135
Query: 166 EIGGHDGAEKFADS--------------HVFNSLNVGIVLDEGLASTTEDYRAFYAERCP 211
E DG K ++ ++ VG V+ G + Y
Sbjct: 136 EGPAQDGTVKVVETLEARNEKMDWCLIGEPSSTHQVGDVIKNGRRGSLHGY--------- 186
Query: 212 WWLVIKARGAPGHGA--KLYDNSAMENLFKSIESV-RRFRASQFDLVKAGLKAEGEVVSV 268
+ RG GH A L +N A+ N+ +++++ + F + D +
Sbjct: 187 ----LTVRGVQGHVAYPHLAEN-AVHNVAPALDALAKEFWDNGNDFFPP--------TTF 233
Query: 269 NMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASR-NMTFE 327
+ ++AG S N+ P E F+ R AESLE R+V A R N+ ++
Sbjct: 234 QITRVEAGVGS------NIVPGECLVHFNFRYCTENTAESLEERVV---AILDRHNLKYD 284
Query: 328 LGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRE 387
L Q+ GRP LT + + A+R G+ + ++D R+
Sbjct: 285 L-QWHLS-------GRPFLT---DKGALVSAAQNAIRTVTGRETELSTSGGTSDGRFIAP 333
Query: 388 RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESII 428
G + P+ T +H +E + + +IYE I+
Sbjct: 334 TGAQVVELGPINAT---IHKVDECVKAEDLDTLSEIYEQIL 371
>sp|Q2T9M7|P20D1_BOVIN Probable carboxypeptidase PM20D1 OS=Bos taurus GN=PM20D1 PE=2 SV=1
Length = 503
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 80 LLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQY 139
L GS+P + +L +H DVVP+ W PF L+ G I+ RG+ D K M
Sbjct: 107 LFTIKGSDPSMQPYILLAHIDVVPAPDKGWDVPPFSG-LERDGFIYGRGTLDNKNYLMAI 165
Query: 140 LEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEG 194
L+A+ L + P RS +++ DEEI G +GA+K + + + V+DEG
Sbjct: 166 LQALELLLIRNYIPRRSFFIALGHDEEISGINGAQKISALLQARGVQLAFVVDEG 220
>sp|Q5ZL18|P20D1_CHICK Probable carboxypeptidase PM20D1 OS=Gallus gallus GN=PM20D1 PE=2
SV=1
Length = 517
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 80 LLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQY 139
L GS+ ++ +L +H DVVP+ P W PF A + +G I+ RG+ D K +
Sbjct: 119 LFTVQGSDSEMMPYMLLAHMDVVPAPPEGWDFPPFSAA-EHEGFIYGRGTLDNKNSAIGI 177
Query: 140 LEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLA 196
L+A+ L ++P RS Y+ DEE+ G GA K A + + +LDEG A
Sbjct: 178 LQALEFLLRRNYRPRRSFYVGIGHDEEVFGQKGALKIAALLESRGVKLSFLLDEGSA 234
>sp|Q32LT9|P2011_DANRE Probable carboxypeptidase PM20D1.1 OS=Danio rerio GN=pm20d1.1 PE=2
SV=1
Length = 515
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 80 LLKWPGSNPQLPSILLNSHTDVVPS-EPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQ 138
L G++ L +L +H DVVP+ E W PF A + G I+ RG+ D K M
Sbjct: 122 LFTVVGADAGLEPYMLLAHIDVVPANEAGGWDAPPFSAQ-EIDGFIYGRGTIDNKQSVMG 180
Query: 139 YLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLA 196
L+A+ L G+ P R+ Y+ DEEI G +GA K + + + VLDEGL
Sbjct: 181 ILQALEYLLERGYTPRRTFYIGLGHDEEINGEEGAVKIVNLLKSRGVKLLYVLDEGLT 238
>sp|Q0A7H5|DAPE_ALHEH Succinyl-diaminopimelate desuccinylase OS=Alkalilimnicola ehrlichei
(strain MLHE-1) GN=dapE PE=3 SV=1
Length = 375
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 150/399 (37%), Gaps = 60/399 (15%)
Query: 46 NPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105
P + + + L + + L++ + L W Q P HTDVVP
Sbjct: 18 TPMDAGCQQLLAERLRPLGFDCERLDYGEVNNL----WARRGQQGPVFCFAGHTDVVPPG 73
Query: 106 P-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPD 164
P ++W H PF ++ QG ++ RG+ DMK ++ A+ R A G +P S+ L D
Sbjct: 74 PEAQWRHPPFQPVVE-QGLLYGRGAADMKGSVAAFVTALERYLAGGHRPRGSLALLITSD 132
Query: 165 EEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAF--YAERCPWWLVIKARGAP 222
EE DG ++ + L G S+TE R + RG
Sbjct: 133 EEGPAVDGTRHVVETLSERGERIDWCL-VGEPSSTERVGDVVKVGRRGSLNGRLTVRGDQ 191
Query: 223 GHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGE----VVSVNMAFLKAGTP 278
GH A Y + A + +++ ++ +++D EG S ++ ++AGT
Sbjct: 192 GHVA--YPHLARNPVHQALAALDELVTTRWD--------EGNDHFPPTSFQISNVQAGTG 241
Query: 279 SPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLH 338
+ N+ P E E F+ R A+ L++R+ R L
Sbjct: 242 A-----TNVIPGELEVTFNFRFSTEVTADELQQRVE---------------AVLDRHGLD 281
Query: 339 DKF-----GRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPAS---TDARYFRERGL 390
+ G P LTA + AVR G P + S +D R+ G
Sbjct: 282 GRIDWSLSGEPFLTA---EGELVAATQAAVRDV---CGDPPVLSTSGGTSDGRFIAPTGA 335
Query: 391 PAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIK 429
+ P+ T +H NE + A+ IYE +++
Sbjct: 336 QVLELGPVNAT---IHKVNEHVRAADLDTLSRIYEGVLR 371
>sp|O13968|YE48_SCHPO Uncharacterized carboxypeptidase C24C9.08 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC24C9.08 PE=3 SV=1
Length = 596
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 79 ILLKWPGSNPQLPSILLNSHTDVVPSEPS---KWSHHPFGAHLDSQGNIFARGSQDMKCV 135
+L+ GSN L ++L H DVVP + +W PF A G++++RG+ D K
Sbjct: 178 LLITLEGSNKDLKPLVLMGHQDVVPVNQASLDRWYFPPFSATY-HNGHVYSRGAADDKNS 236
Query: 136 GMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADS--HVFNSLNVGIVLDE 193
+ LEA+ L S ++P ++V SF DEE+ G+ GA A + V ++LDE
Sbjct: 237 VVAILEALEILAISDYKPEQTVIASFGFDEEVSGYRGALPLAHKLYERYGKDGVALILDE 296
Query: 194 GLASTTEDYRAFYAERC 210
G T + +A C
Sbjct: 297 G-GFTINLFGTLFATVC 312
>sp|O34984|YODQ_BACSU Uncharacterized metallohydrolase YodQ OS=Bacillus subtilis (strain
168) GN=yodQ PE=3 SV=1
Length = 436
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 18/167 (10%)
Query: 92 SILLNSHTDVVPSEPSK-WSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASG 150
S++LN H DVVP K W + P+ A ++ G I+ RGS DMK L A+ L A
Sbjct: 97 SLILNGHIDVVPEGSVKDWKYEPYQA-VEENGKIYGRGSTDMKGGNTALLFALEALHACD 155
Query: 151 FQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERC 210
+ V V DEE GG + +++ G D L + + F ++
Sbjct: 156 VKLKGDVLFQSVVDEECGG---------AGTLSAIMRGYRADGALIPEPTNMKLFIKQQG 206
Query: 211 PWWLVIKARGAPGHGAKLYDN-SAME------NLFKSIESVRRFRAS 250
W I +G HG Y+ SA+E + +E VR R S
Sbjct: 207 SMWFRITVKGLSAHGGTRYEGVSAIEKSMHVITAIQELEKVRNARIS 253
>sp|Q5HKI1|DAPE_STAEQ Probable succinyl-diaminopimelate desuccinylase OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=dapE PE=3
SV=1
Length = 405
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 157/369 (42%), Gaps = 59/369 (15%)
Query: 91 PSILLNSHTDVVPS-EPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS 149
P + ++ H DVV + + W+ PF D G +F RG+ DMK M + A+ LK S
Sbjct: 65 PVLAISGHMDVVDAGDHDDWTFPPFEL-TDKDGKLFGRGTTDMKGGLMAMVIAMIELKQS 123
Query: 150 GFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAER 209
++ L EE + GA+ AD + ++ G+++ E ++ A+YA +
Sbjct: 124 NALKQGTIRLLATTGEETEQY-GAQLLADEGYLDDVS-GLIIGEPTSNI-----AYYAHK 176
Query: 210 CPWWLVIKARGAPGHGA--KLYDNSA---------MENLFKSI-ESVRRFRASQFDLVKA 257
V+ A+G H + L N+ M+ +K+I E + +++
Sbjct: 177 GSMSCVVTAKGKAAHSSMPHLGTNAVDILVDFVNEMKQEYKNIKEHDKVHELDAVPMIEK 236
Query: 258 GL--KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDA-------ES 308
L K E + F+ + G +N P +A A +++R P D+ E
Sbjct: 237 HLHRKIGEEESHIYSGFVMLNSVFNGGKQVNSVPHKATAKYNVRTVPEYDSTFVKDLFEK 296
Query: 309 LERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANG 368
+ R + E++ +T ++ S HD P+ A+D NP L++ R A
Sbjct: 297 VIRHVGEDY------LTVDI------PSSHD----PV--ASDRDNP---LIQNITRIAPN 335
Query: 369 KLGKPEIFPA---STDARYF---RERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGID 422
+ + + A +TDA F E + F P I+ H +EF+ + YL ID
Sbjct: 336 YVHEDIVVSALIGTTDASSFLGTNENNVDFAVFGP--GESIMAHRVDEFIRKDMYLSYID 393
Query: 423 IYESIIKAY 431
+Y+ + KAY
Sbjct: 394 VYKDVFKAY 402
>sp|Q8CQC2|DAPE_STAES Probable succinyl-diaminopimelate desuccinylase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=dapE PE=3 SV=1
Length = 405
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 156/369 (42%), Gaps = 59/369 (15%)
Query: 91 PSILLNSHTDVVPS-EPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS 149
P + ++ H DVV + + W+ PF D G +F RG+ DMK M + A+ LK S
Sbjct: 65 PVLAISGHMDVVDAGDHDDWTFPPFEL-TDKDGKLFGRGTTDMKGGLMAMVIAMIELKQS 123
Query: 150 GFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAER 209
++ L EE + GA+ AD + ++ G+++ E ++ A+YA +
Sbjct: 124 NALKQGTIRLLATTGEETEQY-GAQLLADEGYLDDVS-GLIIGEPTSNI-----AYYAHK 176
Query: 210 CPWWLVIKARGAPGHGA--KLYDNSA---------MENLFKSI-ESVRRFRASQFDLVKA 257
V+ A+G H + L N+ M+ +K+I E + +++
Sbjct: 177 GSMSCVVTAKGKAAHSSMPHLGTNAVDILVDFVNEMKQEYKNIKEHDKVHELDAVPMIEK 236
Query: 258 GL--KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDA-------ES 308
L K E + F+ + G +N P +A A +++R P D+ E
Sbjct: 237 HLHRKIGEEESHIYSGFVMLNSVFNGGKQVNSVPHKATAKYNVRTVPEYDSTFVKDLFEK 296
Query: 309 LERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANG 368
+ R + E + +T ++ S HD P+ A+D NP L++ R A
Sbjct: 297 VIRHVGENY------LTVDI------PSSHD----PV--ASDRDNP---LIQNITRIAPN 335
Query: 369 KLGKPEIFPA---STDARYF---RERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGID 422
+ + + A +TDA F E + F P I+ H +EF+ + YL ID
Sbjct: 336 YVHEDIVVSALIGTTDASSFLGTNENNVDFAVFGP--GESIMAHQVDEFIRKDMYLSYID 393
Query: 423 IYESIIKAY 431
+Y+ + KAY
Sbjct: 394 VYKDVFKAY 402
>sp|Q08BB2|P2012_DANRE Probable carboxypeptidase PM20D1.2 OS=Danio rerio GN=pm20d1.2 PE=2
SV=1
Length = 522
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 80 LLKWPGSNPQLPSILLNSHTDVVPS-EPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQ 138
L G++ L +L +H DVVP+ E W PF A + G I+ RG+ D K M
Sbjct: 124 LFTIAGTDADLEPYMLLAHIDVVPANEADGWDAPPFSAQ-EINGFIYGRGTIDNKQSVMG 182
Query: 139 YLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLA 196
L+A+ L G+ P R+ Y+ DEE+ G GA + + VLDEGLA
Sbjct: 183 ILQALEYLLEKGYTPRRTFYIGLGHDEEVNGLHGAVNIVKLLKSRGVKLLYVLDEGLA 240
>sp|Q9CM22|DAPE_PASMU Succinyl-diaminopimelate desuccinylase OS=Pasteurella multocida
(strain Pm70) GN=dapE PE=3 SV=1
Length = 378
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 159/406 (39%), Gaps = 42/406 (10%)
Query: 28 DSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSN 87
+SIIE R ++ +PD + I + E L + + L F N L L W
Sbjct: 3 NSIIELARELIR--RPSISPDDQGCQQIIAERLERLGFQIEWLPF--NDTLNL--WAKHG 56
Query: 88 PQLPSILLNSHTDVVP-SEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRL 146
P I HTDVVP + ++W + PF A L ++ RG+ DMK + A
Sbjct: 57 SGSPVIAFAGHTDVVPVGDTTQWQYPPFSAQL-VDNVLYGRGAADMKGSLAAMVVAAEHY 115
Query: 147 KASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNS--LNVGIVLDEGLASTTEDYRA 204
+ + +V L DEE DG + ++ + ++ IV G S+ + +
Sbjct: 116 VKANPEHSGTVALLITSDEEAAAKDGTVRVVETLMARGEPIDYCIV---GEPSSAQQFGD 172
Query: 205 FY--AERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAE 262
R + +G GH A Y + A + K++ + Q+D
Sbjct: 173 IVKNGRRGSITANLYIQGIQGHVA--YPHLAQNPVHKALGFLTELTTYQWDNGNDFFPP- 229
Query: 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASR 322
S+ +A ++AGT S N+ P E F++R + +++++ E A
Sbjct: 230 ---TSLQIANIQAGTGSN-----NVIPGELYVQFNLRYCTEVTDDIIKKKVAEMLAKH-- 279
Query: 323 NMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDA 382
Q R H G+P LTA + L + V K + ++DA
Sbjct: 280 -------QLNYRIEWHLS-GKPFLTA---KGKLVDTLLDVVEKITQNRPHLDTGGGTSDA 328
Query: 383 RYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESII 428
R+ G + F P+ T +H +E +N + K ++Y+ ++
Sbjct: 329 RFIALMGAEVVEFGPLNKT---IHKVDECVNVDDLAKCGEVYQHVL 371
>sp|A1WX26|DAPE_HALHL Succinyl-diaminopimelate desuccinylase OS=Halorhodospira halophila
(strain DSM 244 / SL1) GN=dapE PE=3 SV=1
Length = 378
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 135/352 (38%), Gaps = 36/352 (10%)
Query: 83 WPGSNPQLPSILLNSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLE 141
W + P HTDVVPS P S W H PF +++ G ++ RG+ DMK ++
Sbjct: 51 WAQRGTERPLFCFLGHTDVVPSGPESAWQHPPFQPIVEN-GCLYGRGAADMKGSVAAFVA 109
Query: 142 AIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVL---DEGLAST 198
A+ R A ++ + DEE DG + ++ + L A
Sbjct: 110 AVERFVARHPDHAGAIAVLLTSDEEGPAVDGTRRVVETLAARGAAIDYCLVGEPSSQARL 169
Query: 199 TEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAG 258
++Y+ R + G GH A Y + A + +++ A+++D A
Sbjct: 170 GDEYK--VGRRGSLTGHLTVHGEQGHVA--YPHQADNPIHAFAPALQELVATEWDQGDAD 225
Query: 259 LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWA 318
S ++ ++AGT + N+ P E F++R P AE L+ RI
Sbjct: 226 FPP----TSFQISNIQAGTGAD-----NVIPGAMEVVFNLRYAPAVSAEELQERI----- 271
Query: 319 PASRNMTFELGQFKQRASLHDKF-GRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFP 377
L + +LH + G P T + +E+AV G+ +
Sbjct: 272 ------ESILHRHGVHHTLHWRHSGAPFAT---REGALIDAVEQAVTAHTGQCPRRSTSG 322
Query: 378 ASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIK 429
++D R+ G + P+ T +H NE + A+ IY I++
Sbjct: 323 GTSDGRFMGPTGAQVVELGPLNAT---IHKANEHVAVADLEALEAIYFDILQ 371
>sp|Q02IY2|DAPE_PSEAB Succinyl-diaminopimelate desuccinylase OS=Pseudomonas aeruginosa
(strain UCBPP-PA14) GN=dapE PE=3 SV=1
Length = 383
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 141/382 (36%), Gaps = 46/382 (12%)
Query: 59 QAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP-SKWSHHPFGAH 117
+A +LE +E N W P + HTDVVP+ P W H PF A
Sbjct: 40 EAAGFALEPMRIEEVDNF------WARRGGDGPVLCFAGHTDVVPTGPLQAWQHQPFDAL 93
Query: 118 LDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFA 177
+D QG + RG+ DMK + A+ R A + ++ DEE H G +
Sbjct: 94 IDDQGMLCGRGAADMKGSLASMIVAVERFVADHPKHKGAIAFLITSDEEGPAHHGTKAVV 153
Query: 178 DSHVFNS--LNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAME 235
+ L+ IV + S D R + RG GH A Y + A
Sbjct: 154 ERLAARGERLDWCIVGEPSSTSLVGDV-VKNGRRGSLGAKLTIRGVQGHVA--YPHLAKN 210
Query: 236 NLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAG 295
+ + ++ A +D A S ++ L +GT + N+ P E A
Sbjct: 211 PIHLAAPALAELAAEHWDDGNAFFPP----TSFQVSNLNSGTGA-----TNVIPGELTAL 261
Query: 296 FDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKF---GRPILTATDSS 352
F+ R + E L++R+ E K H ++ G P LT
Sbjct: 262 FNFRFSTESTVEGLQKRV-------------EAILDKHGLDWHVEWALSGLPFLT---EP 305
Query: 353 NPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNE-- 410
+ + ++R G+ +P ++D R+ G + P+ T +H NE
Sbjct: 306 GELLDAVAASIRAVTGREARPSTSGGTSDGRFIATMGTQVVELGPVNAT---IHQVNERV 362
Query: 411 FLNQAEYLKGIDIYESIIKAYA 432
+ E L I Y+++++ A
Sbjct: 363 LASDLELLTEI-YYQTLVRLLA 383
>sp|Q31G37|DAPE_THICR Succinyl-diaminopimelate desuccinylase OS=Thiomicrospira crunogena
(strain XCL-2) GN=dapE PE=3 SV=1
Length = 378
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 40 IDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHT 99
I T P+ I + L + + + F + + L W + P I+ HT
Sbjct: 12 IQTESVTPNDNGCQTLIADYLKPLGFDIEPMPFGEVENL----WARAGKDGPVIVFAGHT 67
Query: 100 DVVPSEPS-KWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRL 146
DVVP+ P KW+H PF AH+D+ G ++ RG+ DMK ++ A ++
Sbjct: 68 DVVPTGPEEKWTHPPFSAHIDADGIMYGRGTADMKSSIACFMVATKQF 115
>sp|B6IPH8|DAPE_RHOCS Succinyl-diaminopimelate desuccinylase OS=Rhodospirillum centenum
(strain ATCC 51521 / SW) GN=dapE PE=3 SV=1
Length = 386
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 140/347 (40%), Gaps = 39/347 (11%)
Query: 91 PSILLNSHTDVVPS-EPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS 149
P+ HTDVVP+ + + W+ PFG + G ++ RG+ DMK ++ A+
Sbjct: 65 PNFCFAGHTDVVPAGDAAAWTVDPFGGEI-IDGRLYGRGAADMKGGVAAFIAAVGSFLER 123
Query: 150 GFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAF---- 205
P S+ L DEE +G K D G +D L + RA
Sbjct: 124 NGPPAGSISLLITGDEEGPAVNGTRKVLDWMA----AAGERIDACLVGEPTNPRALGDMI 179
Query: 206 -YAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGE 264
R + A GA GH A Y + A L + E++ +S D+ +
Sbjct: 180 KVGRRGSLTATLTALGAQGHTA--YPHLADNPLPRLAEALHLLASSPLDMGTPHFQPS-- 235
Query: 265 VVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNM 324
++ + + G P+ N+ P+ A F+IR ESLE I R++
Sbjct: 236 --TLALTSIDVGNPA-----SNVIPARGTARFNIRFNDLHTPESLEAHI--------RDV 280
Query: 325 TFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARY 384
E+G + A G LT + + +++ AV G+ + ++DAR+
Sbjct: 281 LEEVGGAWELAL--QTSGVAFLTPPGALS---DIVAAAVEAHTGRTPELSTSGGTSDARF 335
Query: 385 FRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 431
++ P + F + + +H +E + A+ L+ IY ++++ +
Sbjct: 336 IKDH-CPVVEFGLVGAS---MHKVDENVAVADLLELTAIYRTVLERW 378
>sp|Q9I4H5|DAPE_PSEAE Succinyl-diaminopimelate desuccinylase OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=dapE PE=3 SV=1
Length = 383
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 141/382 (36%), Gaps = 46/382 (12%)
Query: 59 QAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP-SKWSHHPFGAH 117
+A +LE +E N W P + HTDVVP+ P W H PF A
Sbjct: 40 EAAGFALEPMRIEEVDNF------WARRGGDGPVLCFAGHTDVVPTGPLQAWQHQPFDAL 93
Query: 118 LDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFA 177
+D QG + RG+ DMK + A+ R A + ++ DEE H G +
Sbjct: 94 IDDQGMLCGRGAADMKGSLASMIVAVERFVADHPEHKGAIAFLITSDEEGPAHHGTKAVV 153
Query: 178 DSHVFNS--LNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAME 235
+ L+ IV + S D R + RG GH A Y + A
Sbjct: 154 ERLAARGERLDWCIVGEPSSTSLVGDV-VKNGRRGSLGAKLTIRGVQGHVA--YPHLAKN 210
Query: 236 NLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAG 295
+ + ++ A +D A S ++ L +GT + N+ P E A
Sbjct: 211 PIHLAAPALAELAAEHWDDGNAFFPP----TSFQVSNLNSGTGA-----TNVIPGELTAL 261
Query: 296 FDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKF---GRPILTATDSS 352
F+ R + E L++R+ E K H ++ G P LT
Sbjct: 262 FNFRFSTESTVEGLQKRV-------------EAILDKHGLDWHVEWALSGLPFLT---EP 305
Query: 353 NPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNE-- 410
+ + ++R G+ +P ++D R+ G + P+ T +H NE
Sbjct: 306 GELLDAVAASIRAVTGRETQPSTSGGTSDGRFIATMGTQVVELGPVNAT---IHQVNERV 362
Query: 411 FLNQAEYLKGIDIYESIIKAYA 432
+ E L I Y+++++ A
Sbjct: 363 LASDLELLTEI-YYQTLVRLLA 383
>sp|B7UX27|DAPE_PSEA8 Succinyl-diaminopimelate desuccinylase OS=Pseudomonas aeruginosa
(strain LESB58) GN=dapE PE=3 SV=1
Length = 383
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 141/382 (36%), Gaps = 46/382 (12%)
Query: 59 QAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP-SKWSHHPFGAH 117
+A +LE +E N W P + HTDVVP+ P W H PF A
Sbjct: 40 EAAGFALEPMRIEEVDNF------WARRGGDGPVLCFAGHTDVVPTGPLQAWQHQPFDAL 93
Query: 118 LDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFA 177
+D QG + RG+ DMK + A+ R A + ++ DEE H G +
Sbjct: 94 IDDQGMLCGRGAADMKGSLASMIVAVERFVADHPEHKGAIAFLITSDEEGPAHHGTKAVV 153
Query: 178 DSHVFNS--LNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAME 235
+ L+ IV + S D R + RG GH A Y + A
Sbjct: 154 ERLAARGERLDWCIVGEPSSTSLVGDV-VKNGRRGSLGAKLTIRGVQGHVA--YPHLAKN 210
Query: 236 NLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAG 295
+ + ++ A +D A S ++ L +GT + N+ P E A
Sbjct: 211 PIHLAAPALAELAAEHWDDGNAFFPP----TSFQVSNLNSGTGA-----TNVIPGELTAL 261
Query: 296 FDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKF---GRPILTATDSS 352
F+ R + E L++R+ E K H ++ G P LT
Sbjct: 262 FNFRFSTESTVEGLQKRV-------------EAILDKHGLDWHVEWALSGLPFLT---EP 305
Query: 353 NPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNE-- 410
+ + ++R G+ +P ++D R+ G + P+ T +H NE
Sbjct: 306 GELLDAVAASIRAVTGRETQPSTSGGTSDGRFIATMGTQVVELGPVNAT---IHQVNERV 362
Query: 411 FLNQAEYLKGIDIYESIIKAYA 432
+ E L I Y+++++ A
Sbjct: 363 LASDLELLTEI-YYQTLVRLLA 383
>sp|Q1MM75|DAPE_RHIL3 Succinyl-diaminopimelate desuccinylase OS=Rhizobium leguminosarum
bv. viciae (strain 3841) GN=dapE PE=3 SV=1
Length = 397
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 143/354 (40%), Gaps = 41/354 (11%)
Query: 91 PSILLNSHTDVVP-SEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS 149
P ++ HTDVVP + + W+H PF A + S+G +F RG+ DMK ++ A+ R
Sbjct: 66 PHLMFAGHTDVVPVGDEAAWTHPPFAAEI-SKGELFGRGAVDMKGGIACFVAAVARHIEK 124
Query: 150 GFQPVRSVYLSFVPDEEIGGHDGAEKFAD-----SHVFNSLNVGIVLD-EGLASTTEDYR 203
QP S+ DEE +G K +++ VG + + L + R
Sbjct: 125 SGQPKGSISFLITGDEEGPAINGTIKLLQWAAERGERWDACLVGEPTNPDRLGDMIKIGR 184
Query: 204 AFYAERCPWWLVIKARGAPGHGA--KLYDNSAMENLFKSIESVRR--FRASQFDLVKAGL 259
R I G GH A L DN + + + ++ F D + L
Sbjct: 185 -----RGSLSGKITVHGVQGHAAYPHLADNP-VRGMLQMTHALMDPPFDGGTDDFQPSNL 238
Query: 260 KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP 319
EV +V++ G P+ N+ P++A A F+IR + E+L I+
Sbjct: 239 ----EVTTVDV-----GNPA-----TNVIPAKASASFNIRFNDSWTVETLRAEILRRLDA 284
Query: 320 ASRNMTFELGQ--FKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFP 377
A+ N G+ K D+ LT +N L AV +G+ K
Sbjct: 285 AAGNGELRPGRDPVKYDIVWADRPSHVFLT---RNNALIASLSSAVESVSGQSPKLSTTG 341
Query: 378 ASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 431
++DAR+ ++ P + F + T +H +E + A+ IYE+ I +
Sbjct: 342 GTSDARFIKDY-CPVVEFGLVGQT---MHMVDERVAVADLETLTAIYETFIARW 391
>sp|A9CKC4|DAPE_AGRT5 Succinyl-diaminopimelate desuccinylase OS=Agrobacterium tumefaciens
(strain C58 / ATCC 33970) GN=dapE PE=3 SV=1
Length = 398
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 146/359 (40%), Gaps = 45/359 (12%)
Query: 91 PSILLNSHTDVVP-SEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS 149
P ++ HTDVVP + + WSH PF A + + G ++ RG+ DMK ++ AI R
Sbjct: 66 PHLMFAGHTDVVPVGDEAAWSHPPFSADI-AGGEMYGRGAVDMKGGIACFVAAIARHIGK 124
Query: 150 GFQPVRSVYLSFVPDEEIGGHDGAEKF-----ADSHVFNSLNVGIVLD-EGLASTTEDYR 203
+P SV DEE +G K A +++ VG + + L + R
Sbjct: 125 HGKPQGSVSFLITGDEEGPSINGTSKLLEWAAAKGETWDACVVGEPTNPDQLGDMIKIGR 184
Query: 204 AFYAERCPWWLVIKARGAPGHGA--KLYDNSAMENLFKSIESVRR--FRASQFDLVKAGL 259
R I +G GH A L DN + L + ++ F D + L
Sbjct: 185 -----RGSLSGRITVQGVQGHAAYPHLADNP-IRGLLQLTHALMHPAFDHGTDDFQPSNL 238
Query: 260 KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP 319
EV +V+ A T N+ P+ A A F+IR + AESL I+
Sbjct: 239 ----EVTTVDTG--NAAT--------NVIPARATAAFNIRFNDSWTAESLRAEIIRRLDA 284
Query: 320 ASRNMTFELGQFK-QRASLHDKF---GRPILTATDSSNPWWNLLEEAVRKANGKLGKPEI 375
A+ G+ + RA + + RP +N + L A+ GK K
Sbjct: 285 AANE-----GELRPDRAPVKYEIVWADRPSHVFLTRNNALISSLSGAIETVTGKEPKLST 339
Query: 376 FPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASY 434
++DAR+ ++ P + F + T +H +E + A+ IYE+ I+ + ++
Sbjct: 340 TGGTSDARFIKDY-CPVVEFGLVGQT---MHMVDERVAVADLETLTRIYETFIERWFAH 394
>sp|Q98D57|DAPE_RHILO Succinyl-diaminopimelate desuccinylase OS=Rhizobium loti (strain
MAFF303099) GN=dapE PE=3 SV=1
Length = 397
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 144/350 (41%), Gaps = 32/350 (9%)
Query: 91 PSILLNSHTDVVP-SEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS 149
P ++ HTDVVP + + W+H PF A + + G ++ RG+ DMK ++ AI R +
Sbjct: 67 PHLMFAGHTDVVPVGDEAAWTHPPFAAEI-ANGEMYGRGAVDMKGGIACFVAAIARHVEN 125
Query: 150 GFQPVRSVYLSFVPDEEIGGHDGAEKFAD--SHVFNSLNVGIVLDEGLASTTEDYRAFYA 207
P SV L DEE +G K + + + IV + T D
Sbjct: 126 NGGPKGSVSLLITGDEEGPAINGTVKLLEWAASRGEKWDASIVGEPTNPDTLGDMIKI-G 184
Query: 208 ERCPWWLVIKARGAPGHGA--KLYDNSAMENLFKSIESVRR--FRASQFDLVKAGLKAEG 263
R I G GH A +L DN + L ++++ F D L
Sbjct: 185 RRGSLSGSITVNGRQGHAAYPQLADNP-VRGLMGLVDALLHPVFDKGTKDFQPTNL---- 239
Query: 264 EVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRN 323
EV S+++ G P+ N+ P++A A F+IR T AE+++ I A++
Sbjct: 240 EVTSIDV-----GNPA-----TNVIPAKATATFNIRFNDTWTAETVQAEIHNRLDQAAKR 289
Query: 324 MTFELGQFKQRASLHDKF--GRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTD 381
+ G K+ +D RP + + L +++ A GK ++D
Sbjct: 290 KKYRPG--KKTPVDYDLVWRDRPSHVFLTRDDKLVDTLAGSIKAAVGKEPTLSTSGGTSD 347
Query: 382 ARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 431
AR+ ++ P + F + T +H +E + A+ IY+ I+ +
Sbjct: 348 ARFIKDY-CPVVEFGLVGKT---MHMVDERVALADLETLTRIYQRFIEDW 393
>sp|A9M0W6|DAPE_NEIM0 Succinyl-diaminopimelate desuccinylase OS=Neisseria meningitidis
serogroup C (strain 053442) GN=dapE PE=3 SV=1
Length = 381
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 6/134 (4%)
Query: 46 NPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105
PD + K ++ + + ++ L F K + W ++P + HTDVVP+
Sbjct: 20 TPDDRDCQKLLVERLYKIGFAAEELHFGDTKNI----WLRRGTKVPVVCFAGHTDVVPTG 75
Query: 106 P-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPD 164
P KW PF + G ++ RG+ DMK ++ A R A S+ L D
Sbjct: 76 PVEKWDSPPF-EPTERDGRLYGRGAADMKTSIACFVTACERFVAEHPDHQGSIALLITSD 134
Query: 165 EEIGGHDGAEKFAD 178
EE DG K D
Sbjct: 135 EEGDALDGTTKVVD 148
>sp|A1ISU7|DAPE_NEIMA Succinyl-diaminopimelate desuccinylase OS=Neisseria meningitidis
serogroup A / serotype 4A (strain Z2491) GN=dapE PE=3
SV=1
Length = 381
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 6/134 (4%)
Query: 46 NPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105
PD + K ++ + + ++ L F K + W ++P + HTDVVP+
Sbjct: 20 TPDDRDCQKLLVERLYKIGFAAEELHFGDTKNI----WLRRGTKVPVVCFAGHTDVVPTG 75
Query: 106 P-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPD 164
P KW PF + G ++ RG+ DMK ++ A R A S+ L D
Sbjct: 76 PVEKWDSPPF-EPTERDGRLYGRGAADMKTSIACFVTACERFVAEHPDHQGSIALLITSD 134
Query: 165 EEIGGHDGAEKFAD 178
EE DG K D
Sbjct: 135 EEGDALDGTTKVVD 148
>sp|A6V936|DAPE_PSEA7 Succinyl-diaminopimelate desuccinylase OS=Pseudomonas aeruginosa
(strain PA7) GN=dapE PE=3 SV=1
Length = 383
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 141/382 (36%), Gaps = 46/382 (12%)
Query: 59 QAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSK-WSHHPFGAH 117
+A +LE +E N W P + HTDVVP+ P + W H PF A
Sbjct: 40 EAAGFALEPMRIEEVDNF------WARRGGDGPVLCFAGHTDVVPTGPVQAWQHQPFDAL 93
Query: 118 LDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFA 177
+D QG + RG+ DMK + A+ R A ++ DEE H G +
Sbjct: 94 IDEQGMLCGRGAADMKGSLASMIVAVERFVADHPGHKGAIAFLITSDEEGPAHHGTKAVV 153
Query: 178 DSHVFNS--LNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAME 235
+ L+ IV + S D R + RG GH A Y + A
Sbjct: 154 ERLAARGERLDWCIVGEPSSTSLVGDV-VKNGRRGSLGARLTIRGVQGHVA--YPHLAKN 210
Query: 236 NLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAG 295
+ + ++ A +D A S ++ L +GT + N+ P E A
Sbjct: 211 PIHLAAPALAELAAEHWDDGNAFFPP----TSFQISNLNSGTGA-----TNVIPGELSAL 261
Query: 296 FDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKF---GRPILTATDSS 352
F+ R + E L++R+ E K H ++ G P LT
Sbjct: 262 FNFRFSTESTVEGLQKRV-------------EAILDKHGLDWHVEWALSGLPFLT---EP 305
Query: 353 NPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNE-- 410
+ + +++ G+ +P ++D R+ G + P+ T +H NE
Sbjct: 306 GELLDAVAASIKAVTGRETRPSTSGGTSDGRFIATMGTQVVELGPVNAT---IHQVNERV 362
Query: 411 FLNQAEYLKGIDIYESIIKAYA 432
+ E L I Y+++++ A
Sbjct: 363 LASDLELLTEI-YYQTLVRLLA 383
>sp|A1B5Y2|DAPE_PARDP Succinyl-diaminopimelate desuccinylase OS=Paracoccus denitrificans
(strain Pd 1222) GN=dapE PE=3 SV=1
Length = 382
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 150/397 (37%), Gaps = 36/397 (9%)
Query: 40 IDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHT 99
I + PD A + A E ++ + P + +W + + N HT
Sbjct: 15 IRCASVTPDEGGALVLLADVLGAAGFECHRVD-REGVPNLFARWGAQGAR--TFGFNGHT 71
Query: 100 DVV-PSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVY 158
DVV P +P+ W+H PF H +++G I+ RG+ DMK + A P +V
Sbjct: 72 DVVPPGDPASWTHPPFSGH-EAEGWIWGRGATDMKSGVAAFAAAAIGFVTQTPPPDGAVI 130
Query: 159 LSFVPDEEIGGHDGAEKFAD--SHVFNSLNVGIVLDEGLASTTEDYRAF--YAERCPWWL 214
L+ DEE G G D + ++V IV G S + R L
Sbjct: 131 LAITGDEEGPGKHGTRALLDWMAARGERMDVCIV---GEPSNPDRMGEMIKIGRRGSMTL 187
Query: 215 VIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLK 274
I+A G GH A Y + A + + + + D G V+ +
Sbjct: 188 QIEAHGIQGHAA--YPHRARNPIHALLRLLHELTDAPLDEGTEHFDPSGLQVTT----VD 241
Query: 275 AGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQR 334
G P+ N+ P A A +IR AESL+R I A S +
Sbjct: 242 CGNPA-----SNVIPERARAVINIRFNDAHTAESLDRMIRARAAAISAETKVDF------ 290
Query: 335 ASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIG 394
A D G LTA P+ +L+ VR+ G ++DAR+ ++ P +
Sbjct: 291 AISTDVSGESFLTA---PGPFVDLVAGVVREETGLDPVLSTSGGTSDARFVKDH-CPVLE 346
Query: 395 FSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 431
F + + +H +E + + + IY I++ Y
Sbjct: 347 FGLVGH---FMHQVDERVPADQVRQLARIYRRILERY 380
>sp|Q2SBP0|DAPE_HAHCH Succinyl-diaminopimelate desuccinylase OS=Hahella chejuensis
(strain KCTC 2396) GN=dapE PE=3 SV=1
Length = 383
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 138/353 (39%), Gaps = 38/353 (10%)
Query: 83 WPGSNPQLPSILLNSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLE 141
W Q P ++ HTDVVP+ P KW H PF A + G + RG+ DMK ++
Sbjct: 55 WARRGSQAPLVVFAGHTDVVPTGPEEKWEHPPFAAEV-KDGVLHGRGAADMKGSLAAFMT 113
Query: 142 AIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLD---EGLAST 198
A R S+ DEE +G K + V + G V+D G S+
Sbjct: 114 ACERFVKKHPNHRGSIGWLITSDEEGHAVNGTVKVVEYLV----DKGEVIDWCIVGEPSS 169
Query: 199 TEDYRAFY--AERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVK 256
T R + +G GH A Y + A + K+ ++ ++D
Sbjct: 170 THTVGDVIKNGRRGSIGATLIVKGVQGHVA--YPHLADNPIHKAAPALAELANEKWDEGN 227
Query: 257 AGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEE 316
A A S+ ++ + GT + N+ P E F++R +A+ +++R E
Sbjct: 228 AFFPA----TSLQISNINGGTGA-----TNVIPGELNIMFNLRFSTELNADVIKQR--SE 276
Query: 317 WAPASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIF 376
+ +++ +++ +G P LT S P ++A++ G
Sbjct: 277 AILQKHGLDYDI-EWRL-------YGEPFLT---SKGPLIEATQKAIKHVRGSDTTLSTS 325
Query: 377 PASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIK 429
++D R+ G + P T +H NE + +E + IYE I++
Sbjct: 326 GGTSDGRFIAPTGAQVVELGPCNAT---IHRINEQVLVSEIDQLSSIYEHILE 375
>sp|B9J8D0|DAPE_AGRRK Succinyl-diaminopimelate desuccinylase OS=Agrobacterium radiobacter
(strain K84 / ATCC BAA-868) GN=dapE PE=3 SV=1
Length = 397
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 146/362 (40%), Gaps = 57/362 (15%)
Query: 91 PSILLNSHTDVVP-SEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS 149
P ++ HTDVVP + + WSH PF A + + G +F RG+ DMK + A+ R
Sbjct: 66 PHLMFAGHTDVVPVGDAASWSHPPFAADI-AGGELFGRGAVDMKGGIACFAAAVARHIEK 124
Query: 150 GFQPVRSVYLSFVPDEEIGGHDG-----------AEKFADSHVFNSLN---VGIVLDEGL 195
P S+ DEE +G E++ S V N +G ++ G
Sbjct: 125 HGPPAGSISFLITGDEEGPAINGTVKLLQWAAERGEQWDASLVGEPTNPDQLGDMIKIGR 184
Query: 196 ASTTEDYRAFYAERCPWWLVIKARGAPGHGA--KLYDNSAMENLFKSIESVRR--FRASQ 251
+ + I G GH A L DN + ++ K E++ F A
Sbjct: 185 RGSISGF-------------ITVHGVQGHAAYPHLADNP-VRSIVKLTEALLDPPFDAGT 230
Query: 252 FDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLER 311
+ + L EV ++++ A T N+ P++A A F+IR T E+L
Sbjct: 231 DNFQPSNL----EVTTIDVG--NAAT--------NVIPAKATAAFNIRFNDTWTVETLRA 276
Query: 312 RIVEEWAPASRNMTFELGQ--FKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGK 369
I+ A+ + T G+ K + D+ + LT +N L AV G
Sbjct: 277 EILARLDAAAADQTLRPGREPTKYDITWSDRPSQVFLT---RNNALIASLSSAVENVTGH 333
Query: 370 LGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIK 429
K ++DAR+ ++ P + F + T +H +E + A+ +IYE+ I+
Sbjct: 334 TPKLSTTGGTSDARFIKDY-CPVVEFGLVGQT---MHMVDERVAVADLETLTEIYETFIQ 389
Query: 430 AY 431
+
Sbjct: 390 RW 391
>sp|Q5F812|DAPE_NEIG1 Succinyl-diaminopimelate desuccinylase OS=Neisseria gonorrhoeae
(strain ATCC 700825 / FA 1090) GN=dapE PE=3 SV=1
Length = 381
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 6/134 (4%)
Query: 46 NPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105
PD + K + + + ++ L F K + W + P + HTDVVP+
Sbjct: 20 TPDDRDCQKLLAERLHKIGFAAEELHFGDTKNI----WLRRGTKAPVVCFAGHTDVVPTG 75
Query: 106 P-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPD 164
P KW PF + G ++ RG+ DMK ++ A R A S+ L D
Sbjct: 76 PVEKWDSPPF-EPTERDGRLYGRGAADMKTSIACFVTACERFVAEHPDHQGSIALLITSD 134
Query: 165 EEIGGHDGAEKFAD 178
EE DG K D
Sbjct: 135 EEGDALDGTTKVVD 148
>sp|B4RKY8|DAPE_NEIG2 Succinyl-diaminopimelate desuccinylase OS=Neisseria gonorrhoeae
(strain NCCP11945) GN=dapE PE=3 SV=2
Length = 381
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 6/134 (4%)
Query: 46 NPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105
PD + K + + + ++ L F K + W + P + HTDVVP+
Sbjct: 20 TPDDRDCQKLLAERLHKIGFAAEELHFGDTKNI----WLRRGTKAPVVCFAGHTDVVPTG 75
Query: 106 P-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPD 164
P KW PF + G ++ RG+ DMK ++ A R A S+ L D
Sbjct: 76 PVEKWDSPPF-EPTERDGRLYGRGAADMKTSIACFVTACERFVAEHPDHQGSIALLITSD 134
Query: 165 EEIGGHDGAEKFAD 178
EE DG K D
Sbjct: 135 EEGDALDGTTKVVD 148
>sp|Q8YDB0|DAPE_BRUME Succinyl-diaminopimelate desuccinylase OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=dapE
PE=3 SV=1
Length = 395
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 136/350 (38%), Gaps = 32/350 (9%)
Query: 91 PSILLNSHTDVVPSEPSK-WSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS 149
P ++ HTDVVP K W H PF A ++ G ++ RG+ DMK ++ A+ R
Sbjct: 67 PHLMFAGHTDVVPPGDEKDWKHPPFAAAIE-DGVMYGRGAVDMKGGIACFVAAVARHIEK 125
Query: 150 GFQPVRSVYLSFVPDEEIGGHDGAEKFAD--SHVFNSLNVGIVLDEGLASTTEDYRAFYA 207
S+ DEE +G K + S + IV + + D
Sbjct: 126 HGNIKGSISFLITGDEEGPAVNGTVKLLEWAKQRGESWDASIVGEPTNPNALGDMIKI-G 184
Query: 208 ERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEG-EVV 266
R I G GH A Y + A + + V FD A +A EV
Sbjct: 185 RRGSLSGTITVHGVQGHAA--YPHLAENPVRGIVTLVDSLLCPAFDEGTANFQASNLEVT 242
Query: 267 SVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTF 326
++++ N+ P++A A F+IR T AESL+ I+ A+R+
Sbjct: 243 TIDVG----------NKATNVIPNKATASFNIRFNDTWTAESLQAEIISRLERAARDNRL 292
Query: 327 ELGQ---FKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPA--STD 381
G+ K + ++ LT + L +V GK +PE+ + ++D
Sbjct: 293 RQGRETPIKYELTWRERPSHVFLTHDEK---LIGTLTASVEAVTGK--RPELSTSGGTSD 347
Query: 382 ARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 431
AR+ ++ P + F T +H +E + A+ IYE I +
Sbjct: 348 ARFIKDY-CPVVEFGLTGQT---MHMVDERVALADLEGLTQIYERFIADF 393
>sp|Q9JYL2|DAPE_NEIMB Succinyl-diaminopimelate desuccinylase OS=Neisseria meningitidis
serogroup B (strain MC58) GN=dapE PE=1 SV=1
Length = 381
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 6/134 (4%)
Query: 46 NPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105
PD + K + + + ++ L F K + W + P + HTDVVP+
Sbjct: 20 TPDDRDCQKLLAERLHKIGFAAEELHFGDTKNI----WLRRGTKAPVVCFAGHTDVVPTG 75
Query: 106 P-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPD 164
P KW PF + G ++ RG+ DMK ++ A R A S+ L D
Sbjct: 76 PVEKWDSPPF-EPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSD 134
Query: 165 EEIGGHDGAEKFAD 178
EE DG K D
Sbjct: 135 EEGDALDGTTKVVD 148
>sp|Q6VE94|DAPE_PSESY Succinyl-diaminopimelate desuccinylase OS=Pseudomonas syringae pv.
syringae GN=dapE PE=3 SV=1
Length = 378
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 128/345 (37%), Gaps = 30/345 (8%)
Query: 91 PSILLNSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS 149
P + HTDVVP+ P W+ PF A +D QG + RG+ DMK L A R
Sbjct: 61 PVLCFAGHTDVVPTGPLQAWNIPPFDAFIDDQGMLHGRGAADMKGSLAAMLVAAERFVVD 120
Query: 150 GFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVG-IVLDEGLASTTEDYRAFYAE 208
SV DEE H G + + V + ++ E ++T
Sbjct: 121 YPDHRGSVAFLITSDEEGPAHHGTKAVVERLVARQQRLDWCIVGEPSSTTLVGDIVKNGR 180
Query: 209 RCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSV 268
R + RG GH A Y + A + ++ + +D A S
Sbjct: 181 RGSLGATLTLRGVQGHVA--YPHLAKNPIHLLAPALAELVSEHWDSGNAFFPP----TSF 234
Query: 269 NMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEL 328
++ L +GT + N+ P E A F+ R + ESL+ R+ E S + +
Sbjct: 235 QVSNLNSGTGA-----TNVIPGELVAVFNFRFSTESTVESLKSRVAEILDKHSLDWHIDW 289
Query: 329 GQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRER 388
G P LT + + +++ G+ + ++D R+
Sbjct: 290 AL----------SGLPFLT---EPGALLDAVASSIKAVTGRDTQASTSGGTSDGRFIATM 336
Query: 389 GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDI-YESIIKAYA 432
G + P+ T +H NE + ++ +I YE++IK A
Sbjct: 337 GTQVVELGPVNAT---IHQVNECILASDLDVLTEIYYETLIKLLA 378
>sp|A1KUW7|DAPE_NEIMF Succinyl-diaminopimelate desuccinylase OS=Neisseria meningitidis
serogroup C / serotype 2a (strain ATCC 700532 / FAM18)
GN=dapE PE=3 SV=1
Length = 381
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 6/134 (4%)
Query: 46 NPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105
PD + K + + + ++ L F K + W + P + HTDVVP+
Sbjct: 20 TPDDRDCQKLLAERLHKIGFAAEELHFGDTKNI----WLRRGTKAPVVCFAGHTDVVPTG 75
Query: 106 P-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPD 164
P KW PF + G ++ RG+ DMK ++ A R A S+ L D
Sbjct: 76 PVEKWDSPPF-EPAERDGRLYGRGAADMKTSIACFVTACERFVAEHPDHQGSIALLITSD 134
Query: 165 EEIGGHDGAEKFAD 178
EE DG K D
Sbjct: 135 EEGDALDGTTKVVD 148
>sp|A1W7M0|DAPE_ACISJ Succinyl-diaminopimelate desuccinylase OS=Acidovorax sp. (strain
JS42) GN=dapE PE=3 SV=1
Length = 391
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 134/341 (39%), Gaps = 46/341 (13%)
Query: 92 SILLNSHTDVVPSEP-SKWSHHPFG-AHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS 149
+++ HTDVVP+ P +WS PF H D G ++ RG+ DMK ++ A+ A+
Sbjct: 72 TVVFAGHTDVVPTGPVEQWSSPPFTPTHRD--GRLYGRGASDMKASIAAFVVAVEEFLAA 129
Query: 150 GFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNS--LNVGIVLDEGLASTTEDY----- 202
P + L DEE DG + + L+ IV + T D
Sbjct: 130 TPDPRLDIALLLTSDEEGPSVDGTKVVIEQLRARGERLDWCIVGEPTSVEQTGDMIKNGR 189
Query: 203 RAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAE 262
R + R + RG GH A Y A + +++ ++ A+ +D+ A
Sbjct: 190 RGTLSGR------LTVRGVQGHIA--YPQLARNPIHQAVPALTELAATVWDMGNAFFPP- 240
Query: 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRI--VEEWAPA 320
S M+ + GT + N+ P + F+ R + AE L++R+ V +
Sbjct: 241 ---TSWQMSNIHGGTGA-----TNVIPGQVVIDFNFRFSTESTAEGLQQRVHAVLDRHGL 292
Query: 321 SRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPAST 380
++T+ LG G+P LT + +++A+R G + ++
Sbjct: 293 EYDLTWTLG------------GQPFLT---TPGELVQAVQQAIRAETGLETELSTTGGTS 337
Query: 381 DARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGI 421
D R+ + I P N I D N L E LK I
Sbjct: 338 DGRFIAQICPQVIELGP-PNASIHKIDENVRLVDIEPLKNI 377
>sp|Q576T3|DAPE_BRUAB Succinyl-diaminopimelate desuccinylase OS=Brucella abortus biovar 1
(strain 9-941) GN=dapE PE=3 SV=1
Length = 395
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 136/350 (38%), Gaps = 32/350 (9%)
Query: 91 PSILLNSHTDVVPSEPSK-WSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS 149
P ++ HTDVVP K W H PF A ++ G ++ RG+ DMK ++ A+ R
Sbjct: 67 PHLMFAGHTDVVPPGDEKDWKHPPFAAEIE-DGVMYGRGAVDMKGGIACFVAAVARHIEK 125
Query: 150 GFQPVRSVYLSFVPDEEIGGHDGAEKFAD--SHVFNSLNVGIVLDEGLASTTEDYRAFYA 207
S+ DEE +G K + S + IV + + D
Sbjct: 126 HGNIKGSISFLITGDEEGPAVNGTVKLLEWAKQRGESWDASIVGEPTNPNALGDMIKI-G 184
Query: 208 ERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEG-EVV 266
R I G GH A Y + A + + V FD A +A EV
Sbjct: 185 RRGSLSGTITVHGVQGHAA--YPHLAENPVRGIVTLVDSLLYPAFDEGTANFQASNLEVT 242
Query: 267 SVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTF 326
++++ N+ P++A A F+IR T AESL+ I+ A+R+
Sbjct: 243 TIDVG----------NKATNVIPNKATASFNIRFNDTWTAESLQAEIISRLERAARDNRL 292
Query: 327 ELGQ---FKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPA--STD 381
G+ K + ++ LT + L +V GK +PE+ + ++D
Sbjct: 293 RQGRETPIKYELTWRERPSHVFLTHDEK---LIGTLTASVEAVTGK--RPELSTSGGTSD 347
Query: 382 ARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 431
AR+ ++ P + F T +H +E + A+ IYE I +
Sbjct: 348 ARFIKDY-CPVVEFGLTGQT---MHMVDERVALADLEGLTQIYERFIADF 393
>sp|Q2YJQ6|DAPE_BRUA2 Succinyl-diaminopimelate desuccinylase OS=Brucella abortus (strain
2308) GN=dapE PE=3 SV=1
Length = 395
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 136/350 (38%), Gaps = 32/350 (9%)
Query: 91 PSILLNSHTDVVPSEPSK-WSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS 149
P ++ HTDVVP K W H PF A ++ G ++ RG+ DMK ++ A+ R
Sbjct: 67 PHLMFAGHTDVVPPGDEKDWKHPPFAAEIE-DGVMYGRGAVDMKGGIACFVAAVARHIEK 125
Query: 150 GFQPVRSVYLSFVPDEEIGGHDGAEKFAD--SHVFNSLNVGIVLDEGLASTTEDYRAFYA 207
S+ DEE +G K + S + IV + + D
Sbjct: 126 HGNIKGSISFLITGDEEGPAVNGTVKLLEWAKQRGESWDASIVGEPTNPNALGDMIKI-G 184
Query: 208 ERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEG-EVV 266
R I G GH A Y + A + + V FD A +A EV
Sbjct: 185 RRGSLSGTITVHGVQGHAA--YPHLAENPVRGIVTLVDSLLYPAFDEGTANFQASNLEVT 242
Query: 267 SVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTF 326
++++ N+ P++A A F+IR T AESL+ I+ A+R+
Sbjct: 243 TIDVG----------NKATNVIPNKATASFNIRFNDTWTAESLQAEIISRLERAARDNRL 292
Query: 327 ELGQ---FKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPA--STD 381
G+ K + ++ LT + L +V GK +PE+ + ++D
Sbjct: 293 RQGRETPIKYELTWRERPSHVFLTHDEK---LIGTLTASVEAVTGK--RPELSTSGGTSD 347
Query: 382 ARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 431
AR+ ++ P + F T +H +E + A+ IYE I +
Sbjct: 348 ARFIKDY-CPVVEFGLTGQT---MHMVDERVALADLEGLTQIYERFIADF 393
>sp|B2SC17|DAPE_BRUA1 Succinyl-diaminopimelate desuccinylase OS=Brucella abortus (strain
S19) GN=dapE PE=3 SV=1
Length = 395
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 136/350 (38%), Gaps = 32/350 (9%)
Query: 91 PSILLNSHTDVVPSEPSK-WSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS 149
P ++ HTDVVP K W H PF A ++ G ++ RG+ DMK ++ A+ R
Sbjct: 67 PHLMFAGHTDVVPPGDEKDWKHPPFAAEIE-DGVMYGRGAVDMKGGIACFVAAVARHIEK 125
Query: 150 GFQPVRSVYLSFVPDEEIGGHDGAEKFAD--SHVFNSLNVGIVLDEGLASTTEDYRAFYA 207
S+ DEE +G K + S + IV + + D
Sbjct: 126 HGNIKGSISFLITGDEEGPAVNGTVKLLEWAKQRGESWDASIVGEPTNPNALGDMIKI-G 184
Query: 208 ERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEG-EVV 266
R I G GH A Y + A + + V FD A +A EV
Sbjct: 185 RRGSLSGTITVHGVQGHAA--YPHLAENPVRGIVTLVDSLLYPAFDEGTANFQASNLEVT 242
Query: 267 SVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTF 326
++++ N+ P++A A F+IR T AESL+ I+ A+R+
Sbjct: 243 TIDVG----------NKATNVIPNKATASFNIRFNDTWTAESLQAEIISRLERAARDNRL 292
Query: 327 ELGQ---FKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPA--STD 381
G+ K + ++ LT + L +V GK +PE+ + ++D
Sbjct: 293 RQGRETPIKYELTWRERPSHVFLTHDEK---LIGTLTASVEAVTGK--RPELSTSGGTSD 347
Query: 382 ARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 431
AR+ ++ P + F T +H +E + A+ IYE I +
Sbjct: 348 ARFIKDY-CPVVEFGLTGQT---MHMVDERVALADLEGLTQIYERFIADF 393
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,149,455
Number of Sequences: 539616
Number of extensions: 7206404
Number of successful extensions: 16822
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 327
Number of HSP's that attempted gapping in prelim test: 16491
Number of HSP's gapped (non-prelim): 506
length of query: 447
length of database: 191,569,459
effective HSP length: 121
effective length of query: 326
effective length of database: 126,275,923
effective search space: 41165950898
effective search space used: 41165950898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)