Query 013216
Match_columns 447
No_of_seqs 139 out of 1744
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 01:35:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013216.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013216hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01880 Ac-peptdase-euk N-ac 100.0 4.5E-61 9.7E-66 482.9 44.5 391 26-433 7-399 (400)
2 PRK08588 succinyl-diaminopimel 100.0 7.7E-58 1.7E-62 456.1 42.8 371 27-433 1-377 (377)
3 PRK06915 acetylornithine deace 100.0 2.4E-58 5.2E-63 466.3 39.0 384 22-435 11-421 (422)
4 KOG2275 Aminoacylase ACY1 and 100.0 6.1E-58 1.3E-62 432.0 38.0 404 16-433 12-419 (420)
5 PRK13013 succinyl-diaminopimel 100.0 9.2E-58 2E-62 463.0 41.9 392 23-434 9-424 (427)
6 PRK06837 acetylornithine deace 100.0 2.6E-56 5.7E-61 451.3 39.9 381 22-434 14-424 (427)
7 PRK13983 diaminopimelate amino 100.0 5.6E-56 1.2E-60 446.4 41.2 380 25-430 2-399 (400)
8 PRK08596 acetylornithine deace 100.0 4.3E-56 9.4E-61 448.9 39.8 388 24-435 9-419 (421)
9 PRK09133 hypothetical protein; 100.0 8.8E-56 1.9E-60 453.0 41.7 384 24-433 33-470 (472)
10 PRK13009 succinyl-diaminopimel 100.0 2.7E-55 5.9E-60 437.6 42.4 369 28-432 2-374 (375)
11 TIGR01910 DapE-ArgE acetylorni 100.0 6.9E-56 1.5E-60 441.6 35.6 365 32-423 2-375 (375)
12 TIGR01246 dapE_proteo succinyl 100.0 7E-55 1.5E-59 433.7 41.0 365 31-431 2-370 (370)
13 PRK08201 hypothetical protein; 100.0 9.1E-55 2E-59 443.9 39.6 390 24-432 10-454 (456)
14 PRK07906 hypothetical protein; 100.0 1.8E-54 3.8E-59 438.4 38.7 376 31-430 2-425 (426)
15 TIGR01892 AcOrn-deacetyl acety 100.0 1.5E-54 3.3E-59 430.6 37.0 358 32-428 1-364 (364)
16 PRK06446 hypothetical protein; 100.0 5E-54 1.1E-58 435.6 40.4 383 28-432 2-434 (436)
17 PRK07522 acetylornithine deace 100.0 2.5E-54 5.3E-59 432.2 37.7 368 28-432 4-384 (385)
18 PRK08651 succinyl-diaminopimel 100.0 5.2E-54 1.1E-58 431.1 39.7 377 24-433 2-392 (394)
19 PRK05111 acetylornithine deace 100.0 4.3E-54 9.3E-59 430.1 38.0 368 27-432 4-381 (383)
20 PRK13004 peptidase; Reviewed 100.0 6.7E-54 1.5E-58 430.4 39.4 380 22-434 9-398 (399)
21 TIGR03526 selenium_YgeY putati 100.0 7.9E-54 1.7E-58 429.3 38.4 377 23-432 8-394 (395)
22 TIGR03320 ygeY M20/DapE family 100.0 8E-54 1.7E-58 429.4 38.2 377 24-433 9-395 (395)
23 PRK07338 hypothetical protein; 100.0 6.1E-54 1.3E-58 431.5 36.3 366 22-433 11-399 (402)
24 PRK06133 glutamate carboxypept 100.0 3.1E-53 6.7E-58 426.4 39.6 367 25-433 34-408 (410)
25 PRK07473 carboxypeptidase; Pro 100.0 3.3E-53 7.2E-58 421.0 38.8 362 23-431 6-375 (376)
26 PRK09104 hypothetical protein; 100.0 5.1E-53 1.1E-57 431.7 40.4 393 23-432 12-462 (464)
27 PRK08262 hypothetical protein; 100.0 1.1E-52 2.4E-57 431.7 41.0 384 25-434 41-486 (486)
28 PRK07907 hypothetical protein; 100.0 1.3E-52 2.8E-57 427.0 39.3 389 22-432 12-447 (449)
29 PRK08737 acetylornithine deace 100.0 2.6E-52 5.5E-57 412.3 38.4 353 27-429 5-362 (364)
30 PRK00466 acetyl-lysine deacety 100.0 5.9E-52 1.3E-56 408.7 38.0 339 24-433 6-344 (346)
31 PRK07079 hypothetical protein; 100.0 1.5E-51 3.3E-56 421.2 41.3 388 27-435 16-458 (469)
32 PRK08652 acetylornithine deace 100.0 2.4E-51 5.2E-56 405.1 37.9 344 28-433 2-346 (347)
33 COG0624 ArgE Acetylornithine d 100.0 1.8E-50 4E-55 407.1 39.7 382 25-433 10-408 (409)
34 PRK04443 acetyl-lysine deacety 100.0 3.2E-50 7E-55 396.5 37.7 342 27-431 5-348 (348)
35 TIGR01886 dipeptidase dipeptid 100.0 6.2E-50 1.3E-54 407.6 36.2 369 24-432 9-465 (466)
36 TIGR01900 dapE-gram_pos succin 100.0 1.9E-49 4E-54 393.9 34.6 343 33-413 1-373 (373)
37 PRK13007 succinyl-diaminopimel 100.0 7.9E-49 1.7E-53 387.8 37.5 342 27-428 6-351 (352)
38 PRK07205 hypothetical protein; 100.0 1.4E-48 3E-53 396.8 37.1 368 24-433 7-443 (444)
39 TIGR01883 PepT-like peptidase 100.0 7.6E-49 1.6E-53 389.2 34.3 349 29-428 1-360 (361)
40 PRK13381 peptidase T; Provisio 100.0 8.1E-49 1.8E-53 394.2 34.2 360 29-433 2-404 (404)
41 TIGR01902 dapE-lys-deAc N-acet 100.0 2.4E-48 5.3E-53 381.5 36.6 333 32-433 1-335 (336)
42 PRK07318 dipeptidase PepV; Rev 100.0 1.9E-48 4.2E-53 397.7 34.8 370 24-433 10-466 (466)
43 PLN02280 IAA-amino acid hydrol 100.0 3.1E-47 6.7E-52 385.7 37.8 367 27-433 96-475 (478)
44 PRK06156 hypothetical protein; 100.0 1.4E-46 3E-51 387.7 39.9 372 25-435 43-518 (520)
45 PLN02693 IAA-amino acid hydrol 100.0 6.4E-46 1.4E-50 373.9 40.6 365 26-434 45-423 (437)
46 PRK08554 peptidase; Reviewed 100.0 3.4E-46 7.5E-51 376.7 38.0 375 29-432 2-437 (438)
47 PRK05469 peptidase T; Provisio 100.0 6.3E-47 1.4E-51 381.0 31.7 363 28-434 2-407 (408)
48 TIGR01887 dipeptidaselike dipe 100.0 4.8E-45 1E-49 368.9 37.8 360 28-428 2-447 (447)
49 TIGR01893 aa-his-dipept aminoa 100.0 5E-45 1.1E-49 373.4 38.0 363 27-431 3-476 (477)
50 TIGR01882 peptidase-T peptidas 100.0 1.5E-45 3.3E-50 370.4 30.0 356 28-433 3-408 (410)
51 PRK15026 aminoacyl-histidine d 100.0 2.5E-43 5.4E-48 358.2 37.8 360 25-431 7-482 (485)
52 TIGR01891 amidohydrolases amid 100.0 6.4E-44 1.4E-48 353.8 30.9 346 31-417 2-360 (363)
53 PRK12893 allantoate amidohydro 100.0 2.1E-43 4.4E-48 356.2 32.6 353 24-434 6-411 (412)
54 PRK12892 allantoate amidohydro 100.0 2.7E-43 5.9E-48 355.4 30.4 349 24-432 6-410 (412)
55 PRK09290 allantoate amidohydro 100.0 8.1E-43 1.7E-47 351.5 32.1 348 26-433 5-411 (413)
56 KOG2276 Metalloexopeptidases [ 100.0 5.1E-42 1.1E-46 320.5 32.4 397 16-433 4-472 (473)
57 PRK12891 allantoate amidohydro 100.0 2.5E-42 5.4E-47 347.7 30.8 350 27-434 9-411 (414)
58 PRK12890 allantoate amidohydro 100.0 4.6E-42 1E-46 346.3 32.4 350 26-433 7-412 (414)
59 COG1473 AbgB Metal-dependent a 100.0 1.8E-41 3.9E-46 331.2 34.4 368 25-433 9-390 (392)
60 TIGR01879 hydantase amidase, h 100.0 2.8E-41 6.1E-46 338.9 28.9 346 29-431 2-401 (401)
61 TIGR03176 AllC allantoate amid 100.0 1E-39 2.2E-44 327.0 30.1 347 28-433 3-404 (406)
62 PRK13590 putative bifunctional 100.0 1.7E-38 3.7E-43 331.0 32.5 356 19-432 172-587 (591)
63 PRK13799 unknown domain/N-carb 100.0 1.6E-37 3.6E-42 323.2 31.8 359 20-433 173-590 (591)
64 PF01546 Peptidase_M20: Peptid 99.9 5.3E-27 1.1E-31 211.1 15.4 183 94-429 1-188 (189)
65 COG2195 PepD Di- and tripeptid 99.9 4.4E-25 9.6E-30 215.9 21.6 362 26-433 3-413 (414)
66 COG4187 RocB Arginine degradat 99.9 1.6E-20 3.4E-25 178.2 16.1 276 26-317 6-322 (553)
67 PRK10199 alkaline phosphatase 99.8 1.2E-17 2.7E-22 159.7 16.3 122 45-179 50-188 (346)
68 TIGR03106 trio_M42_hydro hydro 99.7 3.4E-15 7.3E-20 145.2 25.2 134 27-169 2-221 (343)
69 PRK09961 exoaminopeptidase; Pr 99.7 4.2E-15 9.1E-20 145.0 23.4 256 31-431 3-333 (344)
70 TIGR03107 glu_aminopep glutamy 99.6 2.5E-13 5.3E-18 132.2 24.1 149 32-193 2-234 (350)
71 COG1363 FrvX Cellulase M and r 99.6 1.2E-12 2.6E-17 125.9 23.2 152 28-193 2-236 (355)
72 PF07687 M20_dimer: Peptidase 99.5 3.8E-14 8.3E-19 115.8 9.6 104 206-319 1-106 (111)
73 PRK09864 putative peptidase; P 99.5 6E-12 1.3E-16 122.2 24.2 145 31-193 3-229 (356)
74 KOG2194 Aminopeptidases of the 98.8 1.9E-08 4.1E-13 105.1 10.7 147 26-194 55-226 (834)
75 PF04389 Peptidase_M28: Peptid 98.8 1.3E-08 2.9E-13 90.5 6.3 86 92-193 2-89 (179)
76 PF05343 Peptidase_M42: M42 gl 98.3 3.1E-06 6.8E-11 80.8 8.8 67 120-193 124-190 (292)
77 KOG3946 Glutaminyl cyclase [Po 98.2 1.6E-05 3.5E-10 72.6 12.3 134 26-179 49-200 (338)
78 COG2234 Iap Predicted aminopep 97.6 0.00024 5.2E-09 72.4 8.5 102 78-193 186-290 (435)
79 KOG2195 Transferrin receptor a 97.3 0.00073 1.6E-08 71.4 8.0 82 75-180 337-421 (702)
80 KOG2526 Predicted aminopeptida 97.0 0.0035 7.6E-08 60.9 8.9 101 75-193 192-305 (555)
81 PF05450 Nicastrin: Nicastrin; 95.7 0.052 1.1E-06 50.1 8.5 71 91-179 1-74 (234)
82 PF05343 Peptidase_M42: M42 gl 94.5 0.048 1E-06 52.2 4.5 69 351-423 221-292 (292)
83 PRK02256 putative aminopeptida 92.6 0.23 4.9E-06 50.6 5.9 74 352-429 381-460 (462)
84 COG4882 Predicted aminopeptida 90.9 0.72 1.6E-05 44.4 6.7 73 77-179 179-259 (486)
85 cd00433 Peptidase_M17 Cytosol 89.8 5.9 0.00013 40.6 12.8 125 30-167 156-296 (468)
86 PTZ00371 aspartyl aminopeptida 88.9 1.1 2.4E-05 45.8 6.9 80 350-433 372-457 (465)
87 PF00883 Peptidase_M17: Cytoso 88.0 5.9 0.00013 38.1 10.7 119 31-167 1-141 (311)
88 PRK02813 putative aminopeptida 87.9 1.1 2.3E-05 45.4 6.0 75 351-429 346-426 (428)
89 PRK05015 aminopeptidase B; Pro 86.5 14 0.00031 37.0 12.6 126 30-168 102-248 (424)
90 PRK00913 multifunctional amino 81.6 21 0.00046 36.7 11.9 124 30-167 173-310 (483)
91 PRK02256 putative aminopeptida 80.1 3 6.4E-05 42.6 5.2 49 121-175 251-299 (462)
92 PTZ00412 leucyl aminopeptidase 73.9 62 0.0013 33.7 12.5 125 30-167 214-355 (569)
93 PRK02813 putative aminopeptida 68.7 5.2 0.00011 40.6 3.6 46 122-174 226-274 (428)
94 PTZ00371 aspartyl aminopeptida 64.6 13 0.00027 38.3 5.5 53 121-175 242-295 (465)
95 COG2195 PepD Di- and tripeptid 64.2 8.8 0.00019 38.6 4.2 89 75-174 45-139 (414)
96 KOG3566 Glycosylphosphatidylin 63.4 92 0.002 32.5 11.1 95 55-180 93-194 (617)
97 PF06675 DUF1177: Protein of u 59.7 1.5E+02 0.0032 27.5 12.3 98 79-193 15-130 (276)
98 COG0260 PepB Leucyl aminopepti 59.5 1.4E+02 0.0029 30.9 11.7 126 30-167 169-309 (485)
99 COG1362 LAP4 Aspartyl aminopep 59.2 20 0.00043 35.8 5.5 77 351-430 354-435 (437)
100 KOG2597 Predicted aminopeptida 57.0 1.6E+02 0.0035 30.4 11.6 126 31-169 192-333 (513)
101 PF09940 DUF2172: Domain of un 48.9 45 0.00099 32.9 6.1 64 83-179 124-187 (386)
102 COG1464 NlpA ABC-type metal io 41.4 63 0.0014 30.3 5.5 64 1-73 1-65 (268)
103 PF02127 Peptidase_M18: Aminop 37.3 64 0.0014 32.8 5.4 75 350-427 352-431 (432)
104 PRK06925 flagellar motor prote 31.8 4E+02 0.0088 24.3 9.9 54 91-164 149-203 (230)
105 PRK15026 aminoacyl-histidine d 30.5 1.2E+02 0.0026 31.4 6.2 39 287-327 353-391 (485)
106 PF07172 GRP: Glycine rich pro 28.4 37 0.00081 26.5 1.6 20 1-20 1-21 (95)
107 KOG3374 Cellular repressor of 28.0 2.7E+02 0.0058 24.3 6.7 16 153-168 141-156 (210)
108 PRK13883 conjugal transfer pro 27.1 4E+02 0.0086 22.8 8.1 21 49-69 62-82 (151)
109 PF04114 Gaa1: Gaa1-like, GPI 26.7 1.6E+02 0.0035 30.6 6.4 74 77-180 4-78 (504)
110 COG4187 RocB Arginine degradat 23.3 2.7E+02 0.0058 28.3 6.7 78 352-432 435-546 (553)
111 cd06411 PB1_p51 The PB1 domain 23.0 3.3E+02 0.0071 20.4 6.4 37 291-327 4-40 (78)
112 COG3002 Uncharacterized protei 23.0 2.8E+02 0.0061 29.5 7.0 80 48-161 540-628 (880)
113 COG4635 HemG Flavodoxin [Energ 21.2 96 0.0021 26.7 2.8 34 37-72 4-37 (175)
No 1
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=4.5e-61 Score=482.86 Aligned_cols=391 Identities=58% Similarity=1.021 Sum_probs=324.3
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCC
Q 013216 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (447)
Q Consensus 26 ~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~ 105 (447)
..++++++|++|++|||+++..++.+++++|.++|+++|++++.++...+++|+++.++|+++..|+|+|+|||||||++
T Consensus 7 ~~~~~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~ 86 (400)
T TIGR01880 7 EEDIAVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVF 86 (400)
T ss_pred chHHHHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCC
Confidence 35788999999999999986556789999999999999999887765457889999998765445899999999999998
Q ss_pred CCCCCcCCCceee-CCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccC
Q 013216 106 PSKWSHHPFGAHL-DSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNS 184 (447)
Q Consensus 106 ~~~W~~~Pf~~~~-~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~ 184 (447)
+..|+++||.+.+ + ||++||||++|||++++++|.|++.|.+.+..++++|.|+|+++||+|+..|++.+++++.+..
T Consensus 87 ~~~W~~~Pf~~~~~~-dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~ 165 (400)
T TIGR01880 87 REHWTHPPFSAFKDE-DGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKA 165 (400)
T ss_pred cccCccCCccceecC-CCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccC
Confidence 7889999999987 5 8999999999999999999999999999888889999999999999976469999998766666
Q ss_pred CceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhHHHHHhc-cccCC
Q 013216 185 LNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAG-LKAEG 263 (447)
Q Consensus 185 ~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~-~~~~~ 263 (447)
.++.+++|.|..+|+....++.++||..+++|+++|+++|++.|...||+..++.++..|..+....++.+... ....+
T Consensus 166 ~~~~~~~d~g~~~~~~~~~i~~~~kG~~~~~l~v~G~~~Hs~~~~~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 245 (400)
T TIGR01880 166 LNLGFALDEGLASPDDVYRVFYAERVPWWVVVTAPGNPGHGSKLMENTAMEKLEKSVESIRRFRESQFQLLQSNPDLAIG 245 (400)
T ss_pred CceEEEEcCCCcccccccceeEEeeEEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHHhcCcccccc
Confidence 67888888776666655689999999999999999999999986545999999999999887654333322211 01112
Q ss_pred CcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCC
Q 013216 264 EVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGR 343 (447)
Q Consensus 264 ~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (447)
..+|++++.+++|. ..|+||++|++.+|+|+.|.++.+++.++|+++++....+++++ +.. ....
T Consensus 246 ~~~t~~v~~i~gG~------~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~i~~~~~~~~~~---~~~------~~~~ 310 (400)
T TIGR01880 246 DVTSVNLTKLKGGV------QSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEWCADAGEGVTYE---FSQ------HSGK 310 (400)
T ss_pred ccceeecceeccCC------cCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHHHhccCCceEEE---Eee------cCCC
Confidence 24789999999887 88999999999999999999999999999999987533345555 331 2223
Q ss_pred CcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHH
Q 013216 344 PILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDI 423 (447)
Q Consensus 344 p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~ 423 (447)
|+..+.+.++|+++.+++++++.+... .+..+.|++|+++++..|+|++.|||+......+|++||+++++++.+++++
T Consensus 311 ~~~~~~~~~~~lv~~l~~a~~~~~~~~-~~~~~~g~tDa~~~~~~gip~v~fgp~~~~~~~aH~~dE~i~i~~l~~~~~~ 389 (400)
T TIGR01880 311 PLVTPHDDSNPWWVAFKDAVKEMGCTF-KPEILPGSTDSRYIRAAGVPALGFSPMNNTPVLLHDHNEFLNEAVFLRGIEI 389 (400)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHcCCee-cceeecCcchHHHHHhCCCCeEEECCccCCcccccCCCCceEHHHHHHHHHH
Confidence 333345668999999999999976543 4566789999999999999999999986433468999999999999999999
Q ss_pred HHHHHHHHHh
Q 013216 424 YESIIKAYAS 433 (447)
Q Consensus 424 ~~~~l~~l~~ 433 (447)
|.+++..+..
T Consensus 390 ~~~~l~~~~~ 399 (400)
T TIGR01880 390 YQTLISALAS 399 (400)
T ss_pred HHHHHHHhhc
Confidence 9999998864
No 2
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=7.7e-58 Score=456.11 Aligned_cols=371 Identities=22% Similarity=0.324 Sum_probs=307.9
Q ss_pred hhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCCC
Q 013216 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP 106 (447)
Q Consensus 27 ~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~ 106 (447)
+++.+++|++|++|||+| ++|.+++++|.++|+++|++++.++..++++|+++++ |.+ .|+|+|+|||||||+++
T Consensus 1 ~~~~~~~l~~Lv~i~s~s--~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~-g~~--~~~il~~~H~DtVp~~~ 75 (377)
T PRK08588 1 EEEKIQILADIVKINSVN--DNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEI-GSG--SPVLALSGHMDVVAAGD 75 (377)
T ss_pred ChHHHHHHHHHhcCCCCC--CcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEe-CCC--CceEEEEeeecccCCCC
Confidence 367899999999999986 6899999999999999999988766555778999998 443 38999999999999975
Q ss_pred -CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCC
Q 013216 107 -SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSL 185 (447)
Q Consensus 107 -~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~ 185 (447)
+.|+++||.+.++ ||++||||++|||++++++|.|++.|.+.+..++++|.|+|++|||+|+ .|++.+++++.+.+.
T Consensus 76 ~~~w~~~Pf~~~~~-~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~-~G~~~~~~~~~~~~~ 153 (377)
T PRK08588 76 VDKWTYDPFELTEK-DGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGE-LGAKQLTEKGYADDL 153 (377)
T ss_pred cccCcCCCCCeEEE-CCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCc-hhHHHHHhcCccCCC
Confidence 7899999999997 9999999999999999999999999999888888999999999999886 699999998766666
Q ss_pred ceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCC
Q 013216 186 NVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGE 264 (447)
Q Consensus 186 ~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 264 (447)
|.+++. +|+. ..++.+++|..+++|+++|+++|+|.|+.| |||..+++++..++.+... +... .....
T Consensus 154 d~~i~~-----ep~~-~~i~~~~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~----~~~~-~~~~~ 222 (377)
T PRK08588 154 DALIIG-----EPSG-HGIVYAHKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDS----IKKH-NPYLG 222 (377)
T ss_pred CEEEEe-----cCCC-ceeEEEEEEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhh----hccc-CccCC
Confidence 766664 4543 568899999999999999999999999999 9999999999998765321 1100 01112
Q ss_pred cceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccC--CCCceEeeccccccccccccCC
Q 013216 265 VVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFELGQFKQRASLHDKFG 342 (447)
Q Consensus 265 ~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 342 (447)
.++++++.+++|. ..|+||++|++.+|+|+.|.++.+++.++|+++++.. ..+.+++ ++. ...
T Consensus 223 ~~t~~v~~i~gG~------~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~---~~~------~~~ 287 (377)
T PRK08588 223 GLTHVVTIINGGE------QVNSVPDEAELEFNIRTIPEYDNDQVISLLQEIINEVNQNGAAQLS---LDI------YSN 287 (377)
T ss_pred CCceeeeEEeCCC------cCCcCCCeEEEEEEeccCCCCCHHHHHHHHHHHHHHHhhccCCceE---EEE------ecC
Confidence 4689999999887 8999999999999999999999999999999888632 2233444 331 223
Q ss_pred CCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHH--cCCCeEEEccCCCCCCCCCCCCccccHHHHHHH
Q 013216 343 RPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRE--RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKG 420 (447)
Q Consensus 343 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~--~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~ 420 (447)
.|++ ..+.++++++.+++++++..+..+.....+|++|+++|.. .++|++.|||+... ..|++||+++++++.++
T Consensus 288 ~~p~-~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~g~tD~~~~~~~~~~ip~i~~Gpg~~~--~~H~~~E~i~~~~l~~~ 364 (377)
T PRK08588 288 HRPV-ASDKDSKLVQLAKDVAKSYVGQDIPLSAIPGATDASSFLKKKPDFPVIIFGPGNNL--TAHQVDEYVEKDMYLKF 364 (377)
T ss_pred CCCc-CCCCCCHHHHHHHHHHHHhhCCCCceecCCCcccHHHHhhhcCCCCEEEECCCCCc--cCCCCCceeEHHHHHHH
Confidence 3443 3456899999999999997554334455678999999875 37899999998432 69999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 013216 421 IDIYESIIKAYAS 433 (447)
Q Consensus 421 ~~~~~~~l~~l~~ 433 (447)
+++|..++..+++
T Consensus 365 ~~~~~~~~~~~~~ 377 (377)
T PRK08588 365 IDIYKEIIIQYLK 377 (377)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999988754
No 3
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=2.4e-58 Score=466.26 Aligned_cols=384 Identities=21% Similarity=0.322 Sum_probs=310.5
Q ss_pred CCCCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeec-----------------CCCCeEEEEec
Q 013216 22 SPAKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFA-----------------KNKPLILLKWP 84 (447)
Q Consensus 22 ~~~~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~-----------------~~~~nl~~~~~ 84 (447)
..+.+.+++++++++|++|||+| ++|.+++++|.++|+++|++++.++.. .+++||++.++
T Consensus 11 ~~~~~~~~~~~~l~~lv~ips~s--~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nlia~~~ 88 (422)
T PRK06915 11 YIESHEEEAVKLLKRLIQEKSVS--GDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDSPNIVATLK 88 (422)
T ss_pred HHHhhHHHHHHHHHHHHhCCCCC--cchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCCceEEEEEc
Confidence 34667789999999999999995 789999999999999999998755321 25789999998
Q ss_pred CCCCCCCeEEEeeccccCCCCC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeec
Q 013216 85 GSNPQLPSILLNSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVP 163 (447)
Q Consensus 85 g~~~~~~~ill~~H~Dtvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 163 (447)
|.++ .|+|+|+|||||||+++ +.|+++||.++++ ||++||||++|||++++++|.|++.|.+.+.+++++|.|+|++
T Consensus 89 g~~~-~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~-~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v~~~~~~ 166 (422)
T PRK06915 89 GSGG-GKSMILNGHIDVVPEGDVNQWDHHPYSGEVI-GGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDVIFQSVI 166 (422)
T ss_pred CCCC-CCeEEEEeeccccCCCCcccCcCCCCCceEE-CCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 7654 48999999999999986 7899999999997 9999999999999999999999999999887888999999999
Q ss_pred CcccCcccCHHHHHccccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHH
Q 013216 164 DEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIE 242 (447)
Q Consensus 164 ~EE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~ 242 (447)
+||+|+ .|+..++.++. +.|.+++. +|+. ..++.+++|..+++|+++|+++|+|.|+.| ||+..+++++.
T Consensus 167 dEE~g~-~G~~~~~~~~~--~~d~~i~~-----ep~~-~~i~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~~~~~~~~ 237 (422)
T PRK06915 167 EEESGG-AGTLAAILRGY--KADGAIIP-----EPTN-MKFFPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIEKSMFVID 237 (422)
T ss_pred ccccCC-cchHHHHhcCc--CCCEEEEC-----CCCC-ccceeecccEEEEEEEEEeeccccCCCCcCcCHHHHHHHHHH
Confidence 999886 58888877643 35666653 4654 568899999999999999999999999999 99999999999
Q ss_pred HHHhchhhhHHHHHhc-cccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCC
Q 013216 243 SVRRFRASQFDLVKAG-LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPAS 321 (447)
Q Consensus 243 ~l~~~~~~~~~~~~~~-~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~ 321 (447)
.|+.+........... .......++++++.+++|. ..|+||+.|++.+|+|+.|.++.+++.++|++.++...
T Consensus 238 ~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~------~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~~l~~~~ 311 (422)
T PRK06915 238 HLRKLEEKRNDRITDPLYKGIPIPIPINIGKIEGGS------WPSSVPDSVILEGRCGIAPNETIEAAKEEFENWIAELN 311 (422)
T ss_pred HHHHHHHHhccccCCCcccCCCCCceEeEEEeeCCC------CCCccCcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 9987653110000000 0001123589999999887 88999999999999999999999999999998876322
Q ss_pred CC------ceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHc-CCCeEE
Q 013216 322 RN------MTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRER-GLPAIG 394 (447)
Q Consensus 322 ~~------~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~-g~p~~~ 394 (447)
.. ..++ ++.. .....|. .++.++++++.++++++++.+..+.....+|++|+++|.+. |+|++.
T Consensus 312 ~~~~~~~~~~~~---v~~~----~~~~~~~--~~~~d~~lv~~l~~a~~~~~G~~~~~~~~~g~tD~~~~~~~~giP~v~ 382 (422)
T PRK06915 312 DVDEWFVEHPVE---VEWF----GARWVPG--ELEENHPLMTTLEHNFVEIEGNKPIIEASPWGTDGGLLTQIAGVPTIV 382 (422)
T ss_pred ccChhhhcCCce---EEee----cccCCcc--cCCCCCHHHHHHHHHHHHHhCCCCeeceeeeeccHHHHhccCCCCEEE
Confidence 11 1123 2210 0112233 46678999999999999985544344566789999999988 899999
Q ss_pred EccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhhc
Q 013216 395 FSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASYV 435 (447)
Q Consensus 395 ~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~~~ 435 (447)
|||+... .+|++||+++++++.+++++|+.++..+++..
T Consensus 383 fGpg~~~--~aH~~dE~v~~~~l~~~~~~~~~ll~~~~~~~ 421 (422)
T PRK06915 383 FGPGETK--VAHYPNEYIEVDKMIAAAKIIALTLLDWCEVK 421 (422)
T ss_pred ECCCCcc--ccCCCCceeEHHHHHHHHHHHHHHHHHHhCCC
Confidence 9998654 69999999999999999999999999998754
No 4
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-58 Score=431.99 Aligned_cols=404 Identities=49% Similarity=0.815 Sum_probs=354.9
Q ss_pred HHhhhcCCCCC-hhHHHHHHHhhhcccCCCCCCChh-HHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeE
Q 013216 16 QLIIFSSPAKS-DDSIIERFRAYLQIDTSQPNPDYT-NASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSI 93 (447)
Q Consensus 16 ~~~~~~~~~~~-~~~~~~~l~~l~~ips~s~~~~e~-~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i 93 (447)
...+...+... +...+..++++++|||+-|.++.. .+++++..+.+.+|+.++.++..++.++++.+++|++|..++|
T Consensus 12 l~~~~~~a~~~e~~~~v~~f~eylRi~Tv~p~~dy~~a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~si 91 (420)
T KOG2275|consen 12 LRSGSVSAGPHEENISVTRFREYLRIPTVQPNPDYTIACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSI 91 (420)
T ss_pred hhcCCCCCCccccchHHHHHHHHhhccccccCCCccHHHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccce
Confidence 33344444443 467899999999999997777776 9999999999999999998888788999999999999999999
Q ss_pred EEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCH
Q 013216 94 LLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGA 173 (447)
Q Consensus 94 ll~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~ 173 (447)
+|++|+||||+..+.|+++||++..+++|.|||||++|||+..++.|+|++.|+..|.+++++|.+.|.+|||.|+..|+
T Consensus 92 lL~SH~DVVP~f~e~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm 171 (420)
T KOG2275|consen 92 LLNSHTDVVPVFREKWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGM 171 (420)
T ss_pred eeeccccccCCCcccCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchH
Confidence 99999999999989999999999986699999999999999999999999999999999999999999999999877899
Q ss_pred HHHHccccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhHH
Q 013216 174 EKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFD 253 (447)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~ 253 (447)
+.+.+..++.+..+++++|+|+..+.....+.+++||..+++|++.|.+||+|.|....++..+.+++..+.+++..+++
T Consensus 172 ~~fa~~~~~~~l~~~filDEG~~se~d~~~vfyaEkg~w~~~v~~~G~~GHss~~~~nTa~~~l~klv~~~~~fr~~q~~ 251 (420)
T KOG2275|consen 172 KEFAKTEEFKKLNLGFILDEGGATENDFATVFYAEKGPWWLKVTANGTPGHSSYPPPNTAIEKLEKLVESLEEFREKQVD 251 (420)
T ss_pred HHHhhhhhhcccceeEEecCCCCCcccceeEEEEeeceeEEEEEecCCCCCCCCCCCccHHHHHHHHHHHHHHhHHHHHH
Confidence 99988667777788999999977676656889999999999999999999999987779999999999999999877777
Q ss_pred HHHhc-cccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHH-HHHhccCCCCceEeeccc
Q 013216 254 LVKAG-LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRI-VEEWAPASRNMTFELGQF 331 (447)
Q Consensus 254 ~~~~~-~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i-~~~~~~~~~~~~~~~~~~ 331 (447)
.+.+. ....+..+|++++.++||. +.|++|+.+++.+|+|..+..+.+++.+++ .+..++...++.++ +
T Consensus 252 ~l~~~p~~~~~~vtT~Nv~~i~GGv------~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~~~~~eg~t~~---f 322 (420)
T KOG2275|consen 252 LLASGPKLALGDVTTINVGIINGGV------QSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWAEEAGEGVTLE---F 322 (420)
T ss_pred HhhcCCceeccceeEEeeeeeeccc------ccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhhhhcCCceEEe---c
Confidence 66544 3455678999999999998 999999999999999999999999999999 55665555667777 6
Q ss_pred cccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCcc
Q 013216 332 KQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEF 411 (447)
Q Consensus 332 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~ 411 (447)
.+.. ...++..++.+.+.|++..+..++++.+++. .+..++|++|.+++++.|+|++.|.|+.+.+-..|..||+
T Consensus 323 ~~~~----~~~~~~~t~~~~s~p~w~~~~~a~~~~~~k~-~~~i~~gstdsr~~rn~gvp~~~fsp~~nt~~~~H~hnE~ 397 (420)
T KOG2275|consen 323 SQKV----ILDYPPVTPTDDSNPFWTAFAGALKDEGGKG-YPEIGPGSTDSRHIRNEGVPAIGFSPIINTPMLLHDHNEF 397 (420)
T ss_pred cCcc----cCCCCCCCCCCCCChHHHHHHHHHHHhcCcc-ceeecccccccchhhhcCcchhcccccccccceecchhhh
Confidence 5421 1155556677888999999999999998876 6778899999999999999999999998877789999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHh
Q 013216 412 LNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 412 v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
+....+.+++++|..++..++.
T Consensus 398 l~~~~~l~gi~~~~~~i~~~~~ 419 (420)
T KOG2275|consen 398 LNEKVFLRGIEIYYTIIVNLAN 419 (420)
T ss_pred hCchhhhhhhhHHHHHHHhhcC
Confidence 9999999999999998877653
No 5
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=9.2e-58 Score=462.98 Aligned_cols=392 Identities=19% Similarity=0.300 Sum_probs=310.0
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCC-ChhHHHHHHHHHHHHCCCceEEEeecC--------CCCeEEEEecCCCCCCCeE
Q 013216 23 PAKSDDSIIERFRAYLQIDTSQPNP-DYTNASKFILAQAEALSLESQTLEFAK--------NKPLILLKWPGSNPQLPSI 93 (447)
Q Consensus 23 ~~~~~~~~~~~l~~l~~ips~s~~~-~e~~~~~~i~~~l~~~G~~~~~~~~~~--------~~~nl~~~~~g~~~~~~~i 93 (447)
.+.+.++++++|++|++|||+++.+ +|.+++++|.++|+++|++++.++..+ +++|++++++|..+ .|+|
T Consensus 9 ~~~~~~~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g~~~-~~~i 87 (427)
T PRK13013 9 IEARRDDLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQGARD-GDCV 87 (427)
T ss_pred HHHhHHHHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecCCCC-CCEE
Confidence 4556789999999999999998654 567999999999999999988664321 25799999977543 4889
Q ss_pred EEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCH
Q 013216 94 LLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGA 173 (447)
Q Consensus 94 ll~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~ 173 (447)
+|+||+||||++ +.|+++||++.++ ||+|||||++|||++++++|.|++.|++.+.+++++|.|+|+++||+|+..|.
T Consensus 88 ~l~gH~DvVp~~-~~W~~~Pf~~~~~-dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~ 165 (427)
T PRK13013 88 HFNSHHDVVEVG-HGWTRDPFGGEVK-DGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEESGGFGGV 165 (427)
T ss_pred EEEeccccCCCC-CCCcCCCCCceEE-CCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCChhHH
Confidence 999999999986 6799999999997 99999999999999999999999999998877889999999999999875688
Q ss_pred HHHHcccccc--CCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhh
Q 013216 174 EKFADSHVFN--SLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRAS 250 (447)
Q Consensus 174 ~~~~~~~~~~--~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~ 250 (447)
.++++++.++ +.|++++. +|+....+..+++|..+++|+++|+++|++.|+.| ||+..++++|..|+.+...
T Consensus 166 ~~l~~~~~~~~~~~d~~i~~-----ep~~~~~i~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l~~l~~~~~~ 240 (427)
T PRK13013 166 AYLAEQGRFSPDRVQHVIIP-----EPLNKDRICLGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVLAEIEERLFP 240 (427)
T ss_pred HHHHhcCCccccCCCEEEEe-----cCCCCCceEEeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHHHHHHHHhhh
Confidence 8888776555 45766665 45543468899999999999999999999999999 9999999999999753211
Q ss_pred hHHHHHhccc---cCCCcceeeeeeeecCCCCC----CCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccC---
Q 013216 251 QFDLVKAGLK---AEGEVVSVNMAFLKAGTPSP----NGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--- 320 (447)
Q Consensus 251 ~~~~~~~~~~---~~~~~~t~~~~~i~~g~~~~----~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--- 320 (447)
..+....... .....++++++.|++|.... +....|+||++|++.+|+|+.|.++.+++.++|+++++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~~~i~~~~~~ 320 (427)
T PRK13013 241 LLATRRTAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEITALLERLKRA 320 (427)
T ss_pred hhhcccccCCCCCcccCCCceeeeEEeCCCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHhh
Confidence 1100000000 00124689999999986321 0112399999999999999999999999999998887631
Q ss_pred CCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcC-C-CeEEEccC
Q 013216 321 SRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERG-L-PAIGFSPM 398 (447)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g-~-p~~~~gp~ 398 (447)
..+++++ ++. ....|++ ..+.++++++.+.+++++..+..+....++|++|++++.+.| + |++.|||+
T Consensus 321 ~~~~~~~---~~~------~~~~~p~-~~~~~~~lv~~l~~a~~~~~g~~~~~~~~~g~~D~~~~~~~g~~~~~v~fGPg 390 (427)
T PRK13013 321 RPGFAYE---IRD------LFEVLPT-MTDRDAPVVRSVAAAIERVLGRQADYVVSPGTYDQKHIDRIGKLKNCIAYGPG 390 (427)
T ss_pred CCCceeE---EEE------cccCCcc-cCCCCCHHHHHHHHHHHHhhCCCCceeecCccCCHHHHHhcCCCCCEEEECCC
Confidence 2344455 331 1233333 356678999999999998655443455667889999999987 4 69999998
Q ss_pred CCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhh
Q 013216 399 ANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASY 434 (447)
Q Consensus 399 ~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~~ 434 (447)
... .+|++|||++++++.+++++|+.++..+++.
T Consensus 391 ~~~--~aH~~nE~v~i~~l~~~~~~l~~~l~~~~~~ 424 (427)
T PRK13013 391 ILD--LAHQPDEWVGIADMVDSAKVMALVLADLLAG 424 (427)
T ss_pred Ccc--ccCCCCceeEHHHHHHHHHHHHHHHHHHhcc
Confidence 653 6999999999999999999999999998753
No 6
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.6e-56 Score=451.28 Aligned_cols=381 Identities=19% Similarity=0.271 Sum_probs=309.1
Q ss_pred CCCCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeec-----------------CCCCeEEEEec
Q 013216 22 SPAKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFA-----------------KNKPLILLKWP 84 (447)
Q Consensus 22 ~~~~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~-----------------~~~~nl~~~~~ 84 (447)
..+.+.++++++|++|++|||+| ++|.+++++|.++|+++|++++.++.. ++++||++.++
T Consensus 14 ~i~~~~~~~~~~l~~li~ipS~s--~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~a~~~ 91 (427)
T PRK06837 14 AVDAGFDAQVAFTQDLVRFPSTR--GAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSGAPNVVGTYR 91 (427)
T ss_pred HHHhhhHHHHHHHHHHhccCCCC--CcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCCCceEEEEec
Confidence 34557789999999999999996 688999999999999999998764321 36789999998
Q ss_pred CCCCCCCeEEEeeccccCCCCC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeec
Q 013216 85 GSNPQLPSILLNSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVP 163 (447)
Q Consensus 85 g~~~~~~~ill~~H~Dtvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 163 (447)
|.+++.|+|+|+|||||||+++ +.|+++||+++++ +|+|||||++|||++++++|.|++.|++.+..++++|.|+|++
T Consensus 92 g~~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~-~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~i~~~~~~ 170 (427)
T PRK06837 92 PAGKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIV-DGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAARVHFQSVI 170 (427)
T ss_pred CCCCCCCeEEEEeecccCCCCCccccccCCCCcEEE-CCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEEe
Confidence 7655568999999999999986 7899999999997 9999999999999999999999999999888888999999999
Q ss_pred CcccCcccCHHHHHccccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHH
Q 013216 164 DEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIE 242 (447)
Q Consensus 164 ~EE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~ 242 (447)
+||.++ .|+..++..+. ..|.+++. +|+. ..++++++|..+++|+++|+++|+|.|+.| ||+..+++++.
T Consensus 171 dEE~~g-~g~~~~~~~~~--~~d~~iv~-----ep~~-~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~ 241 (427)
T PRK06837 171 EEESTG-NGALSTLQRGY--RADACLIP-----EPTG-EKLVRAQVGVIWFRLRVRGAPVHVREAGTGANAIDAAYHLIQ 241 (427)
T ss_pred ccccCC-HhHHHHHhcCc--CCCEEEEc-----CCCC-CccccccceeEEEEEEEEeeccccCCcccCcCHHHHHHHHHH
Confidence 999876 48877776543 25666654 4554 578899999999999999999999999999 99999999999
Q ss_pred HHHhchhhhHHHH-Hhc-cccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccC
Q 013216 243 SVRRFRASQFDLV-KAG-LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA 320 (447)
Q Consensus 243 ~l~~~~~~~~~~~-~~~-~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~ 320 (447)
.|+.+........ ... .......++++++.+++|. ..|+||+.|++.+++|+.|.++.+++.++|++.++..
T Consensus 242 ~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni~~i~gG~------~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~~~~~~ 315 (427)
T PRK06837 242 ALRELEAEWNARKASDPHFEDVPHPINFNVGIIKGGD------WASSVPAWCDLDCRIAIYPGVTAADAQAEIEACLAAA 315 (427)
T ss_pred HHHHHHHHHhhcccCCCcccCCCCceeEeeeeEeCCC------CCCccCCEEEEEEEEeECCCCCHHHHHHHHHHHHHHH
Confidence 9987643211000 000 0011123588999999886 8899999999999999999999999999998887632
Q ss_pred CCC--------ceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHH-cCCC
Q 013216 321 SRN--------MTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRE-RGLP 391 (447)
Q Consensus 321 ~~~--------~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~-~g~p 391 (447)
... .+++ +. ....+++ .++.++|+++.+.+++++..+..+.+..++|++|++++.+ .|+|
T Consensus 316 ~~~~~~~~~~~~~~~---~~-------~~~~~p~-~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~g~tDa~~~~~~~gip 384 (427)
T PRK06837 316 ARDDRFLSNNPPEVV---WS-------GFLAEGY-VLEPGSEAEAALARAHAAVFGGPLRSFVTTAYTDTRFYGLYYGIP 384 (427)
T ss_pred HhcChhhhhCCCeEE---EE-------ecccCCc-CCCCCCHHHHHHHHHHHHHhCCCCeeeEEeeccchHHHhccCCCC
Confidence 111 1222 11 1123333 5677899999999999986544435567789999999985 7999
Q ss_pred eEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhh
Q 013216 392 AIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASY 434 (447)
Q Consensus 392 ~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~~ 434 (447)
++.|||+.. .+|++||+++++++.+++++|+.++..++..
T Consensus 385 ~v~~Gp~~~---~~H~~nE~i~i~~l~~~~~~~~~~l~~~~~~ 424 (427)
T PRK06837 385 ALCYGPSGE---GIHGFDERVDLESVRKVTKTIALFVAEWCGV 424 (427)
T ss_pred EEEECCCCC---ccCCCCceEEHHHHHHHHHHHHHHHHHHhCC
Confidence 999999864 5999999999999999999999999988743
No 7
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=5.6e-56 Score=446.45 Aligned_cols=380 Identities=21% Similarity=0.308 Sum_probs=306.3
Q ss_pred CChhHHHHHHHhhhcccCCCCC---CChhHHHHHHHHHHHHCCCc-eEEEeecC----C--CCeEEEEecCCCCCCCeEE
Q 013216 25 KSDDSIIERFRAYLQIDTSQPN---PDYTNASKFILAQAEALSLE-SQTLEFAK----N--KPLILLKWPGSNPQLPSIL 94 (447)
Q Consensus 25 ~~~~~~~~~l~~l~~ips~s~~---~~e~~~~~~i~~~l~~~G~~-~~~~~~~~----~--~~nl~~~~~g~~~~~~~il 94 (447)
...++++++|++|++|||+|+. .+|.+++++|.++|+++|++ ++.++..+ + ++|+++.++|..+ .++|+
T Consensus 2 ~~~~~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~~-~~~ll 80 (400)
T PRK13983 2 ELRDEMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGDG-KRTLW 80 (400)
T ss_pred chHHHHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCCC-CCeEE
Confidence 3457899999999999999853 35889999999999999998 77654321 1 6899999987543 37999
Q ss_pred EeeccccCCCCC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCH
Q 013216 95 LNSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGA 173 (447)
Q Consensus 95 l~~H~Dtvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~ 173 (447)
|+|||||||+++ +.|+.+||.+.++ +|+|||||++|||++++++|.|++.|.+.+.+++++|.|+|+++||.|+..|+
T Consensus 81 l~~H~Dtvp~~~~~~W~~~p~~~~~~-~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~ 159 (400)
T PRK13983 81 IISHMDVVPPGDLSLWETDPFKPVVK-DGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGI 159 (400)
T ss_pred EEeeccccCCCCcccccCCCCcceee-CCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccH
Confidence 999999999976 7899999999997 99999999999999999999999999998888899999999999998864599
Q ss_pred HHHHcc--ccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHh-chh
Q 013216 174 EKFADS--HVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRR-FRA 249 (447)
Q Consensus 174 ~~~~~~--~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~-~~~ 249 (447)
+++++. +.+.+.|++++.+.| .|++ ..++.+++|..+++|+++|+++|+|.|+.| ||+..+++++..+.. +..
T Consensus 160 ~~~~~~~~~~~~~~d~~i~~~~~--~~~~-~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~ 236 (400)
T PRK13983 160 QYLLKKHPELFKKDDLILVPDAG--NPDG-SFIEIAEKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHE 236 (400)
T ss_pred HHHHhhcccccCCCCEEEEecCC--CCCC-ceeEEeecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999976 445556878877644 4554 357889999999999999999999999999 999999999999876 322
Q ss_pred hhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCC--CCceEe
Q 013216 250 SQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPAS--RNMTFE 327 (447)
Q Consensus 250 ~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~--~~~~~~ 327 (447)
. +... .. .......+++++.+.+|. ...|+||++|++.+|+|++|.++.+++.++|+++++... .+.+++
T Consensus 237 ~-~~~~-~~-~~~~~~~~~~~~~~~~g~-----~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~~~~~~~~~~~~~v~ 308 (400)
T PRK13983 237 K-FNAK-DP-LFDPPYSTFEPTKKEANV-----DNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKEIADEFEEEYGVKIE 308 (400)
T ss_pred h-hccc-cc-ccCCCCcccccceeecCC-----cCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhccccCccee
Confidence 1 1100 00 000112356666666552 278999999999999999999999999999998887422 233444
Q ss_pred eccccccccccccC-CCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCC
Q 013216 328 LGQFKQRASLHDKF-GRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLH 406 (447)
Q Consensus 328 ~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H 406 (447)
+.. .. ..|++ .++.++++++.+.+++++..+..+.+..++|++|++++...|+|++.|||+.. .+|
T Consensus 309 ---~~~------~~~~~~~~-~~~~~~~~v~~l~~a~~~~~g~~~~~~~~~g~td~~~~~~~gip~v~~Gp~~~---~~H 375 (400)
T PRK13983 309 ---VEI------VQREQAPP-PTPPDSEIVKKLKRAIKEVRGIEPKVGGIGGGTVAAFLRKKGYPAVVWSTLDE---TAH 375 (400)
T ss_pred ---EEE------eeccCCcc-CCCCCcHHHHHHHHHHHHhcCCCceeeeecCcHHHHHHHHcCCCEEEeCCccc---cCC
Confidence 331 11 23332 46778999999999999976654466667889999999989999999999864 599
Q ss_pred CCCccccHHHHHHHHHHHHHHHHH
Q 013216 407 DHNEFLNQAEYLKGIDIYESIIKA 430 (447)
Q Consensus 407 ~~~E~v~~~~l~~~~~~~~~~l~~ 430 (447)
++||+++++++.+++++|..++..
T Consensus 376 ~~nE~v~i~~l~~~~~~~~~~~~~ 399 (400)
T PRK13983 376 QPNEYAKISNLIEDAKVFALLLLE 399 (400)
T ss_pred CCCceeeHHHHHHHHHHHHHHHhc
Confidence 999999999999999999998753
No 8
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=4.3e-56 Score=448.88 Aligned_cols=388 Identities=20% Similarity=0.276 Sum_probs=310.7
Q ss_pred CCChhHHHHHHHhhhcccCCCCC-CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCC-CCeEEEeecccc
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPN-PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQ-LPSILLNSHTDV 101 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~-~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~-~~~ill~~H~Dt 101 (447)
+...++++++|++|++|||+|+. .+|.+++++|.++|+++|++++.++..++++|+++.++|+++. .|+|+|+|||||
T Consensus 9 ~~~~~~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~lll~~H~Dt 88 (421)
T PRK08596 9 ELRKDELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSLIINGHMDV 88 (421)
T ss_pred HhhHHHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEEEEeccccc
Confidence 34568899999999999999864 3688999999999999999998776555788999999876432 367999999999
Q ss_pred CCCCC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccc
Q 013216 102 VPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH 180 (447)
Q Consensus 102 vp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 180 (447)
||+++ +.|+.+||.+.++ ||+|||||++|||++++++|.|++.|.+.+..++++|.|+|+++||+|+ .|++++++++
T Consensus 89 Vp~~~~~~W~~~Pf~~~~~-~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~-~G~~~~~~~~ 166 (421)
T PRK08596 89 AEVSADEAWETNPFEPTIK-DGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGE-AGTLQCCERG 166 (421)
T ss_pred cCCCCccccccCCCCcEEE-CCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCC-cCHHHHHhcC
Confidence 99987 6799999999997 9999999999999999999999999999988889999999999999986 6999999875
Q ss_pred cccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeec----------CCccCCCCCC-CHHHHHHHHHHHHHhchh
Q 013216 181 VFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGA----------PGHGAKLYDN-SAMENLFKSIESVRRFRA 249 (447)
Q Consensus 181 ~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~----------~~Hs~~p~~g-nai~~~~~~i~~l~~~~~ 249 (447)
. ..|++++.+ |+. . .+.+++|...+.++++|. .+|++.|+.| ||+..++++|..|+.+..
T Consensus 167 ~--~~d~~i~~e-----p~~-~-~~~~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i~~l~~~~~ 237 (421)
T PRK08596 167 Y--DADFAVVVD-----TSD-L-HMQGQGGVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKIIQSLQELER 237 (421)
T ss_pred C--CCCEEEECC-----CCC-C-ccccccceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHHHHHHHHHH
Confidence 3 257788875 443 2 247889988888888875 3699999988 999999999999987643
Q ss_pred hhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCC-------
Q 013216 250 SQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASR------- 322 (447)
Q Consensus 250 ~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~------- 322 (447)
. +.............++++++.|++|. ..|+||++|++.+|+|+.|+++.+++.++|+++++....
T Consensus 238 ~-~~~~~~~~~~~~~~~t~~v~~i~gG~------~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~ 310 (421)
T PRK08596 238 H-WAVMKSYPGFPPGTNTINPAVIEGGR------HAAFIADECRLWITVHFYPNETYEQVIKEIEEYIGKVAAADPWLRE 310 (421)
T ss_pred H-HhhcccCccCCCCCcceeeeeeeCCC------CCCccCceEEEEEEeeeCCCCCHHHHHHHHHHHHHHHHhcChhhhh
Confidence 2 11100000001123688999999887 899999999999999999999999999999988763211
Q ss_pred -CceEeecccccccccc-ccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCC
Q 013216 323 -NMTFELGQFKQRASLH-DKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMAN 400 (447)
Q Consensus 323 -~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~ 400 (447)
...++ +.....+. .....|++ .++.++|+++++.+++++..+..+.+...+|++|++++..+|+|++.|||+..
T Consensus 311 ~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~v~~l~~a~~~~~g~~~~~~~~~g~tD~~~~~~~gip~v~~Gpg~~ 386 (421)
T PRK08596 311 NPPQFK---WGGESMIEDRGEIFPSL-EIDSEHPAVKTLSSAHESVLSKNAILDMSTTVTDGGWFAEFGIPAVIYGPGTL 386 (421)
T ss_pred CCceeE---EecccccccccccCCCc-cCCCCchHHHHHHHHHHHHhCCCCeeeEEeeecchhhhhhcCCCEEEECCCcc
Confidence 11222 10000000 01234544 56778999999999999986655455566789999999999999999999864
Q ss_pred CCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhhc
Q 013216 401 TPILLHDHNEFLNQAEYLKGIDIYESIIKAYASYV 435 (447)
Q Consensus 401 ~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~~~ 435 (447)
. .+|++||+++++++.+++++|..++..+++.+
T Consensus 387 ~--~~H~~~E~v~i~~~~~~~~~~~~~l~~~~~~~ 419 (421)
T PRK08596 387 E--EAHSVNEKVEIEQLIEYTKVITAFIYEWCHTK 419 (421)
T ss_pred c--ccCCCCceEEHHHHHHHHHHHHHHHHHHhCCC
Confidence 3 69999999999999999999999999998765
No 9
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=8.8e-56 Score=453.00 Aligned_cols=384 Identities=21% Similarity=0.322 Sum_probs=305.9
Q ss_pred CCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEee---cCCCCeEEEEecCCCCCCCeEEEeeccc
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEF---AKNKPLILLKWPGSNPQLPSILLNSHTD 100 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~---~~~~~nl~~~~~g~~~~~~~ill~~H~D 100 (447)
+.+.++++++|++|++|||+++.++|.++++||.++|+++|++++.++. .++++||++.++|+++ .++|+|+||||
T Consensus 33 ~~~~~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~-~~~lll~~H~D 111 (472)
T PRK09133 33 TADQQAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDP-KKPILLLAHMD 111 (472)
T ss_pred chhHHHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCC-CCcEEEEeecc
Confidence 3477889999999999999987678899999999999999998754432 2367899999987654 37899999999
Q ss_pred cCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcc-cCcccCHHHHHcc
Q 013216 101 VVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEE-IGGHDGAEKFADS 179 (447)
Q Consensus 101 tvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-~g~~~G~~~~~~~ 179 (447)
|||+++++|+++||+++++ ||+|||||++|||++++++|.|++.|.+.+..++++|.|+|+++|| +|+ .|++.++++
T Consensus 112 tVp~~~~~W~~dPf~~~~~-dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~-~G~~~l~~~ 189 (472)
T PRK09133 112 VVEAKREDWTRDPFKLVEE-NGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPM-NGVAWLAEN 189 (472)
T ss_pred cCCCChhcCCCCCCcceEe-CCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCcc-chHHHHHHH
Confidence 9999877899999999997 9999999999999999999999999999887888999999999999 564 799999876
Q ss_pred cc-ccCCceEEEEecCC------cCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhh--
Q 013216 180 HV-FNSLNVGIVLDEGL------ASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRAS-- 250 (447)
Q Consensus 180 ~~-~~~~~~~~~~d~g~------~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~-- 250 (447)
.. .-..+++++ +.+. .+|+. ..++.++||..+++|+++|+++|+|.|+..|||..++++|..|..+...
T Consensus 190 ~~~~~~~~~~i~-e~~~~~~~~~gept~-~~i~~g~kG~~~~~i~v~G~~~Hss~p~~~nAi~~l~~~l~~l~~~~~~~~ 267 (472)
T PRK09133 190 HRDLIDAEFALN-EGGGGTLDEDGKPVL-LTVQAGEKTYADFRLEVTNPGGHSSRPTKDNAIYRLAAALSRLAAYRFPVM 267 (472)
T ss_pred HhhccCeEEEEE-CCCccccCCCCCceE-EEeeeecceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHhhCCCCCc
Confidence 43 113466666 5433 23443 4577899999999999999999999987559999999999999764210
Q ss_pred -------hHHHH---------------H-------------h-ccccCCCcceeeeeeeecCCCCCCCccccccCCceEE
Q 013216 251 -------QFDLV---------------K-------------A-GLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEA 294 (447)
Q Consensus 251 -------~~~~~---------------~-------------~-~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~ 294 (447)
.++.+ . . ........+|++++.+++|. ..|+||++|++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~------~~NvVP~~a~~ 341 (472)
T PRK09133 268 LNDVTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGH------AENALPQRATA 341 (472)
T ss_pred cCCccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCC------cCccCCCceEE
Confidence 00000 0 0 00000124688999999886 89999999999
Q ss_pred EEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhc-CCCCCc
Q 013216 295 GFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKAN-GKLGKP 373 (447)
Q Consensus 295 ~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~ 373 (447)
.+|+|+.|.++.+++.++|+++++. .+++++ +. ....+. .+.+.+.++++.++++.++.+ +....+
T Consensus 342 ~lDiR~~p~~~~e~v~~~I~~~i~~--~~v~v~---~~-------~~~~~~-~~~~~~~~l~~~l~~~~~~~~~g~~~~~ 408 (472)
T PRK09133 342 NVNCRIFPGDTIEAVRATLKQVVAD--PAIKIT---RI-------GDPSPS-PASPLRPDIMKAVEKLTAAMWPGVPVIP 408 (472)
T ss_pred EEEEEeCCchhHHHHHHHHHHHhcC--CCEEEE---Ec-------cCCCCC-CCCCCCcHHHHHHHHHHHHHCCCCceec
Confidence 9999999999999999999988863 334444 21 111222 245567899999999999874 433244
Q ss_pred eecCCCcchHHHHHcCCCeEE----EccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 374 EIFPASTDARYFRERGLPAIG----FSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 374 ~~~~g~~D~~~~~~~g~p~~~----~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
..++|+||++++...|+|++. |||+... ..|++|||++++++.+++++|..++..+++
T Consensus 409 ~~~~ggtDa~~~~~~gip~~~~~~i~gp~~~~--~aH~~dE~v~i~~l~~~~~~l~~~l~~l~~ 470 (472)
T PRK09133 409 SMSTGATDGRYLRAAGIPTYGVSGLFGDPDDT--FAHGLNERIPVASFYEGRDFLYELVKDLAG 470 (472)
T ss_pred cccccccchHHHHhcCCCceeecCcccCcccc--cCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 567799999999999999984 6666543 689999999999999999999999988754
No 10
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2.7e-55 Score=437.61 Aligned_cols=369 Identities=21% Similarity=0.306 Sum_probs=298.3
Q ss_pred hHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCCC-
Q 013216 28 DSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP- 106 (447)
Q Consensus 28 ~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~- 106 (447)
.++++++++|++|||.| ++|.+++++|.++|+++|++++.++. ++++|+++.+ |. ++|+|+|+||+||||+++
T Consensus 2 ~~~~~~l~~Lv~ips~s--~~e~~~~~~l~~~l~~~G~~~~~~~~-~~~~n~~~~~-g~--~~~~i~l~~H~D~Vp~g~~ 75 (375)
T PRK13009 2 SDVLELAQDLIRRPSVT--PDDAGCQDLLAERLEALGFTCERMDF-GDVKNLWARR-GT--EGPHLCFAGHTDVVPPGDL 75 (375)
T ss_pred chHHHHHHHHhCCCCCC--CchhhHHHHHHHHHHHcCCeEEEecc-CCCcEEEEEe-cC--CCCEEEEEeecccCCCCCc
Confidence 36789999999999996 67889999999999999999886654 3678999987 54 358999999999999976
Q ss_pred CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccc--cC
Q 013216 107 SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVF--NS 184 (447)
Q Consensus 107 ~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~--~~ 184 (447)
+.|+++||.++++ ||++||||++|||++++++|.|++.|++.+..++++|+|+|+++||.++..|++.+++.... ..
T Consensus 76 ~~w~~~Pf~~~~~-~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~ 154 (375)
T PRK13009 76 EAWTSPPFEPTIR-DGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEK 154 (375)
T ss_pred ccCCCCCCCcEEE-CCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcC
Confidence 7999999999997 99999999999999999999999999998877889999999999998655699988764221 13
Q ss_pred CceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCC
Q 013216 185 LNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEG 263 (447)
Q Consensus 185 ~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 263 (447)
.|++++.+.....+. ...++.+++|..+++|+++|+++|++.|+.| ||+..+++++..|..+.... . ....
T Consensus 155 ~d~~i~~ep~~~~~~-~~~i~~g~~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~------~-~~~~ 226 (375)
T PRK13009 155 IDYCIVGEPTSTERL-GDVIKNGRRGSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDE------G-NEFF 226 (375)
T ss_pred CCEEEEcCCCcccCC-CCeEEEecceEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccC------C-CccC
Confidence 566666542111111 1247889999999999999999999999988 99999999999987643210 0 0011
Q ss_pred CcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCC
Q 013216 264 EVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGR 343 (447)
Q Consensus 264 ~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (447)
..++++++.|++|.. ..|+||++|++.+|+|++|.++.+++.++|++.++.. +.+++ ++. .....
T Consensus 227 ~~~~~~i~~i~~G~~-----~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~~~~~~--~~~~~---~~~-----~~~~~ 291 (375)
T PRK13009 227 PPTSLQITNIDAGTG-----ATNVIPGELEAQFNFRFSTEHTAESLKARVEAILDKH--GLDYT---LEW-----TLSGE 291 (375)
T ss_pred CCceEEEEEEecCCC-----CCcccCCcEEEEEEEecCCCCCHHHHHHHHHHHHHhc--CCCeE---EEE-----ecCCC
Confidence 235788999987742 6799999999999999999999999999999888632 33444 331 01234
Q ss_pred CcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHH
Q 013216 344 PILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDI 423 (447)
Q Consensus 344 p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~ 423 (447)
|.. .+ ++++++.+.+++++..+..+.+...+|++|++++.+.|+|++.|||+.. ..|++||+++++++.+++++
T Consensus 292 p~~--~~-~~~~~~~l~~a~~~~~g~~~~~~~~~g~tda~~~~~~g~p~v~~Gp~~~---~~H~~~E~i~~~~l~~~~~~ 365 (375)
T PRK13009 292 PFL--TP-PGKLVDAVVAAIEAVTGITPELSTSGGTSDARFIADYGAQVVEFGPVNA---TIHKVNECVSVADLEKLTRI 365 (375)
T ss_pred ccc--CC-CcHHHHHHHHHHHHHhCCCceeeccCCCccHHHHHHcCCCeEEeccCcc---cCCCCCCcEEHHHHHHHHHH
Confidence 443 23 3899999999999876554355566788999999999999999999865 59999999999999999999
Q ss_pred HHHHHHHHH
Q 013216 424 YESIIKAYA 432 (447)
Q Consensus 424 ~~~~l~~l~ 432 (447)
|..++..+.
T Consensus 366 ~~~~~~~~~ 374 (375)
T PRK13009 366 YERILERLL 374 (375)
T ss_pred HHHHHHHHh
Confidence 999998875
No 11
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=6.9e-56 Score=441.64 Aligned_cols=365 Identities=20% Similarity=0.344 Sum_probs=297.3
Q ss_pred HHHHhhhcccCCC-CCCChhHHHHHHHHHHHHCCCceEEEeecCCCC----eEEEEecCCCCCCCeEEEeeccccCCCCC
Q 013216 32 ERFRAYLQIDTSQ-PNPDYTNASKFILAQAEALSLESQTLEFAKNKP----LILLKWPGSNPQLPSILLNSHTDVVPSEP 106 (447)
Q Consensus 32 ~~l~~l~~ips~s-~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~----nl~~~~~g~~~~~~~ill~~H~Dtvp~~~ 106 (447)
++|++|++|||+| ++++|.++++||.++|+++|++++..+...+.. |+++.++|.+ .+|+|+|++||||||+++
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~ill~~H~DtVp~~~ 80 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNG-NEKSLIFNGHYDVVPAGD 80 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCC-CCCEEEEecccccccCCC
Confidence 6799999999987 467899999999999999999988765433333 4677777754 358999999999999975
Q ss_pred -CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCC
Q 013216 107 -SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSL 185 (447)
Q Consensus 107 -~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~ 185 (447)
++|+++||.+.++ +|++||||++|||++++++|.|++.|.+.+..++++|.|+|+++||.|+ .|++.+++++.+.+.
T Consensus 81 ~~~w~~~Pf~~~~~-~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-~G~~~~~~~~~~~~~ 158 (375)
T TIGR01910 81 LELWKTDPFKPVEK-DGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGE-AGTLYLLQRGYFKDA 158 (375)
T ss_pred hhhCcCCCCCcEEE-CCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCc-hhHHHHHHcCCCCCC
Confidence 8999999999997 9999999999999999999999999999887789999999999999986 699999988766556
Q ss_pred ceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCC
Q 013216 186 NVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGE 264 (447)
Q Consensus 186 ~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 264 (447)
|+.++.+ |++...++.+++|..+++|+++|+++|+|.|+.| ||+..++++|..|..+.....+.... .....
T Consensus 159 d~~i~~~-----~~~~~~v~~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~--~~~~~ 231 (375)
T TIGR01910 159 DGVLIPE-----PSGGDNIVIGHKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSY--GFIPG 231 (375)
T ss_pred CEEEECC-----CCCCCceEEEecceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccc--cccCC
Confidence 7777654 4434678899999999999999999999999998 99999999999998764321110000 01123
Q ss_pred cceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCC--CCceEeeccccccccccccCC
Q 013216 265 VVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPAS--RNMTFELGQFKQRASLHDKFG 342 (447)
Q Consensus 265 ~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 342 (447)
.++++++.+++|. ..|+||++|++.+|+|+.|.++.+++.++|+++++... .+++++ +.. ...
T Consensus 232 ~~t~~i~~i~gG~------~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~------~~~ 296 (375)
T TIGR01910 232 PITFNPGVIKGGD------WVNSVPDYCEFSIDVRIIPEENLDEVKQIIEDVVKALSKSDGWLYE---NEP------VVK 296 (375)
T ss_pred CccccceeEECCC------CcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhcCcHHhh---CCC------eee
Confidence 4689999999887 89999999999999999999999999999999887422 334444 321 122
Q ss_pred CCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHH
Q 013216 343 RPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGID 422 (447)
Q Consensus 343 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~ 422 (447)
.|.....+.++++++++.+++++..+..+.+....|++|++++.+.|+|++.|||+... ..|++||+++++++.++++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~tD~~~~~~~gip~v~~Gpg~~~--~~H~~~E~v~~~~~~~~~~ 374 (375)
T TIGR01910 297 WSGPNETPPDSRLVKALEAIIKKVRGIEPEVLVSTGGTDARFLRKAGIPSIVYGPGDLE--TAHQVNEYISIKNLVESTK 374 (375)
T ss_pred ecCCcCCCCCCHHHHHHHHHHHHHhCCCCeEeeeccchhHHHHHHcCCcEEEECCCCcc--ccCCCCceeEHHHHHHHhh
Confidence 23112467789999999999998654433555677999999999999999999998543 6999999999999999876
Q ss_pred H
Q 013216 423 I 423 (447)
Q Consensus 423 ~ 423 (447)
+
T Consensus 375 ~ 375 (375)
T TIGR01910 375 V 375 (375)
T ss_pred C
Confidence 3
No 12
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=7e-55 Score=433.75 Aligned_cols=365 Identities=21% Similarity=0.306 Sum_probs=294.4
Q ss_pred HHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCCC-CCC
Q 013216 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP-SKW 109 (447)
Q Consensus 31 ~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~-~~W 109 (447)
+++|++|++|||+| ++|.+++++|.++|+++||+++.++. ++++|+++.. |. +.|+|+|+||+||||+++ +.|
T Consensus 2 ~~~l~~lv~ips~s--~~e~~~~~~i~~~l~~~G~~~~~~~~-~~~~~~~~~~-g~--~~~~i~~~~H~DtVp~~~~~~W 75 (370)
T TIGR01246 2 TELAKELISRPSVT--PNDAGCQDIIAERLEKLGFEIEWMHF-GDTKNLWATR-GT--GEPVLAFAGHTDVVPAGPEEQW 75 (370)
T ss_pred hHHHHHHhcCCCCC--cchHHHHHHHHHHHHHCCCEEEEEec-CCCceEEEEe-cC--CCcEEEEEccccccCCCCcccc
Confidence 67899999999996 67889999999999999999886654 3667999986 43 348999999999999986 799
Q ss_pred CcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHcccc--ccCCce
Q 013216 110 SHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHV--FNSLNV 187 (447)
Q Consensus 110 ~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~--~~~~~~ 187 (447)
+++||++..+ ||++||||++|||+++++++.|++.|++.+.+++++|+|+|+++||.++..|++.+++... ....|+
T Consensus 76 ~~~p~~~~~~-dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~ 154 (370)
T TIGR01246 76 SSPPFEPVER-DGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDY 154 (370)
T ss_pred ccCCCCcEEE-CCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCE
Confidence 9999999997 9999999999999999999999999999887788999999999999875459998876321 123577
Q ss_pred EEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcc
Q 013216 188 GIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVV 266 (447)
Q Consensus 188 ~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 266 (447)
+++.+.+...+.+ ..++.+++|..+++++++|+++|++.|+.+ ||+..+++++..|+.+... .. ......+
T Consensus 155 ~i~~ep~~~~~~~-~~i~~~~~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~------~~-~~~~~~~ 226 (370)
T TIGR01246 155 CIVGEPSSVKKLG-DVIKNGRRGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWD------EG-NEFFPPT 226 (370)
T ss_pred EEEcCCCCcccCC-ceEEEeeeEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhc------cC-CccCCCC
Confidence 7765432111111 247889999999999999999999999998 9999999999988754211 00 0011235
Q ss_pred eeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCcc
Q 013216 267 SVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPIL 346 (447)
Q Consensus 267 t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 346 (447)
+++++.+++|.. ..|+||++|++.+|+|++|.++.+++.++|+++++.. +..++ ++. .....|..
T Consensus 227 t~~i~~i~~g~~-----~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~~--~~~~~---v~~-----~~~~~p~~ 291 (370)
T TIGR01246 227 SLQITNIHAGTG-----ANNVIPGELYVQFNLRFSTEVSDEILKQRVEAILDQH--GLDYD---LEW-----SLSGEPFL 291 (370)
T ss_pred ceEeeeeecCCC-----CCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHHc--CCCEE---EEE-----ecCCccee
Confidence 889999998742 5799999999999999999999999999999888632 33444 331 01233432
Q ss_pred cccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHH
Q 013216 347 TATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYES 426 (447)
Q Consensus 347 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~ 426 (447)
.+ ++++++.+.+++++..+..+.+...+|++|++++...|+|++.|||+.. ..|++||+++++++.+++++|.+
T Consensus 292 --~~-~~~~~~~~~~a~~~~~g~~~~~~~~~g~~d~~~~~~~g~p~~~~Gp~~~---~~H~~~E~i~i~~l~~~~~~~~~ 365 (370)
T TIGR01246 292 --TN-DGKLIDKAREAIEETNGIKPELSTGGGTSDGRFIALMGAEVVEFGPVNA---TIHKVNECVSIEDLEKLSDVYQD 365 (370)
T ss_pred --CC-CCHHHHHHHHHHHHHhCCCCceecCCCCchHHHHHHcCCCEEEecCCcc---cCCCCCceeEHHHHHHHHHHHHH
Confidence 33 8999999999999875544355566788999999999999999999875 58999999999999999999999
Q ss_pred HHHHH
Q 013216 427 IIKAY 431 (447)
Q Consensus 427 ~l~~l 431 (447)
++..|
T Consensus 366 ~l~~~ 370 (370)
T TIGR01246 366 LLENL 370 (370)
T ss_pred HHHhC
Confidence 98764
No 13
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=9.1e-55 Score=443.87 Aligned_cols=390 Identities=19% Similarity=0.265 Sum_probs=301.3
Q ss_pred CCChhHHHHHHHhhhcccCCCCC----CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeecc
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPN----PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHT 99 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~----~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~ 99 (447)
+.+.++++++|++|++|||+|+. .++.++++||.++|+++|++...+....+++||++.+.|. +++|+|+|+||+
T Consensus 10 ~~~~~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~-~~~~~lll~gH~ 88 (456)
T PRK08201 10 RERREAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHA-PGKPTVLIYGHY 88 (456)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCC-CCCCEEEEEecc
Confidence 45678999999999999999742 2467899999999999999743333344788999988664 345899999999
Q ss_pred ccCCCCC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHc
Q 013216 100 DVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFAD 178 (447)
Q Consensus 100 Dtvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~ 178 (447)
||||+++ +.|+++||++.++ ||+|||||++|||++++++|.|++.|.+.+..++++|.|++++|||+|+ .|+..+++
T Consensus 89 DvVp~~~~~~W~~dPf~~~~~-~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-~g~~~~l~ 166 (456)
T PRK08201 89 DVQPVDPLNLWETPPFEPTIR-DGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGS-PNLDSFVE 166 (456)
T ss_pred CCcCCCchhcccCCCCceEeE-CCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCC-ccHHHHHH
Confidence 9999987 6799999999997 9999999999999999999999999988766678899999999999987 58888887
Q ss_pred ccc--ccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCC--ccCCCC-CC-CHHHHHHHHHHHHHhchhh--
Q 013216 179 SHV--FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPG--HGAKLY-DN-SAMENLFKSIESVRRFRAS-- 250 (447)
Q Consensus 179 ~~~--~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~--Hs~~p~-~g-nai~~~~~~i~~l~~~~~~-- 250 (447)
+.. + ..|++++.+.+...++. ..+++++||..+++|+++|+++ |||.|. .+ |||..++++|..|.++...
T Consensus 167 ~~~~~~-~~d~~ii~e~~~~~~~~-~~i~~g~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l~~~~~~~~ 244 (456)
T PRK08201 167 EEKDKL-AADVVLISDTTLLGPGK-PAICYGLRGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASLHDEHGTVA 244 (456)
T ss_pred hhHHhc-cCCEEEEeCCCcCCCCC-EEEEEecCCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhcCCCCCCEe
Confidence 532 3 24777877654322322 4699999999999999999998 998765 45 9999999999999763210
Q ss_pred --------------hHHHHHh------------ccc-cC-----------CCcceeeeeeeecCCCCCCCccccccCCce
Q 013216 251 --------------QFDLVKA------------GLK-AE-----------GEVVSVNMAFLKAGTPSPNGFVMNLQPSEA 292 (447)
Q Consensus 251 --------------~~~~~~~------------~~~-~~-----------~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~ 292 (447)
.+..... +.. .. ...+|++++.|++|. .++...|+||++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~--~~~~~~NvVP~~a 322 (456)
T PRK08201 245 VEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGF--QGEGTKTVIPAEA 322 (456)
T ss_pred cCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCC--CCCCCceEECcce
Confidence 0000000 000 00 013588899888875 2334689999999
Q ss_pred EEEEeeecCCCCCHHHHHHHHHHHhccC-CCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCC
Q 013216 293 EAGFDIRVPPTTDAESLERRIVEEWAPA-SRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLG 371 (447)
Q Consensus 293 ~~~~d~R~~~~~~~~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~ 371 (447)
++.+|+|+.|.++.+++.++|+++++.. ..+.+++ +.. ....|++ .++.++++++++.+++++.++..+
T Consensus 323 ~~~~diR~~p~~~~e~v~~~i~~~l~~~~~~~~~v~---~~~------~~~~~~~-~~~~~~~~~~~l~~a~~~~~g~~~ 392 (456)
T PRK08201 323 HAKITCRLVPDQDPQEILDLIEAHLQAHTPAGVRVT---IRR------FDKGPAF-VAPIDHPAIQAAARAYEAVYGTEA 392 (456)
T ss_pred EEEEEEEeCCCCCHHHHHHHHHHHHHHhCCCCeEEE---EEE------CCCcCce-ecCCCCHHHHHHHHHHHHHhCCCc
Confidence 9999999999999999999999888742 1233444 321 1233443 467789999999999998765442
Q ss_pred CceecCCCc---chHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013216 372 KPEIFPAST---DARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 432 (447)
Q Consensus 372 ~~~~~~g~~---D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~ 432 (447)
.. ...|++ |+.++...|+|++.|||+... .++|++||+++++++.+++++|..++..++
T Consensus 393 ~~-~~~gg~~~~~~~~~~~~gip~v~~GpG~~~-~~~H~~nE~v~i~~l~~~~~~l~~~~~~~~ 454 (456)
T PRK08201 393 AF-TRMGGSIPVVETFSSQLHIPIVLMGFGLPS-ENFHAPNEHFHLENFDKGLRTLVEYWHQLA 454 (456)
T ss_pred ee-cCCCCcHHHHHHHHHHhCCCEEEecCCCCC-CCCCCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 22 233445 677777789999999998532 269999999999999999999999999874
No 14
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-54 Score=438.41 Aligned_cols=376 Identities=28% Similarity=0.474 Sum_probs=295.3
Q ss_pred HHHHHhhhcccCCCCC----CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCCC
Q 013216 31 IERFRAYLQIDTSQPN----PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP 106 (447)
Q Consensus 31 ~~~l~~l~~ips~s~~----~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~ 106 (447)
+++|++|++|||+|+. ++|.++++||.++|+++|++++.++..++++|+++.++|.+++.++|+|++|+||||+++
T Consensus 2 ~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~ 81 (426)
T PRK07906 2 VDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEA 81 (426)
T ss_pred hHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCc
Confidence 6789999999999842 578899999999999999999877655577899999987655558999999999999987
Q ss_pred CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccc--cccC
Q 013216 107 SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH--VFNS 184 (447)
Q Consensus 107 ~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~--~~~~ 184 (447)
+.|+++||++.++ ||++||||++|||++++++|.|++.|++.+..++++|.|+|+++||+|+..|++.++++. .+..
T Consensus 82 ~~W~~~Pf~~~~~-dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~~ 160 (426)
T PRK07906 82 ADWSVHPFSGEIR-DGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFEG 160 (426)
T ss_pred ccCccCCCCceee-CCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhccc
Confidence 7899999999997 999999999999999999999999999998888999999999999998656999998753 2322
Q ss_pred CceEEEEecCCc-----CcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhh--------
Q 013216 185 LNVGIVLDEGLA-----STTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQ-------- 251 (447)
Q Consensus 185 ~~~~~~~d~g~~-----~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~-------- 251 (447)
.+ .++.+.+.. .+.....++.++||..+++|+++|+++|+|.|+..||+..++++|..|..+....
T Consensus 161 ~~-~ii~e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss~p~~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~ 239 (426)
T PRK07906 161 VT-EAISEVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGSMVNDDNAVTRLAEAVARIGRHRWPLVLTPTVRA 239 (426)
T ss_pred hh-eEEECCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhCCCCcccCHHHHH
Confidence 22 233332221 1111245889999999999999999999999875599999999999997643210
Q ss_pred -HHHHHh--cc--------------------ccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHH
Q 013216 252 -FDLVKA--GL--------------------KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAES 308 (447)
Q Consensus 252 -~~~~~~--~~--------------------~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~ 308 (447)
++.+.. +. ......+|++++.|++|. +.|+||++|++.+|+|+.|.++ ++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~------~~NviP~~~~~~~d~R~~p~~~-~~ 312 (426)
T PRK07906 240 FLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAGY------KVNVIPGTAEAVVDGRFLPGRE-EE 312 (426)
T ss_pred HHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEeccC------ccccCCCceEEEEEEeECCCCc-HH
Confidence 000000 00 000013589999999887 8999999999999999999886 77
Q ss_pred HHHHHHHHhccCCCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCC-CCCceecCCCcchHHHHH
Q 013216 309 LERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGK-LGKPEIFPASTDARYFRE 387 (447)
Q Consensus 309 i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~g~~D~~~~~~ 387 (447)
+.+.|++++.. .++++ +. .. .|++ .++.++++++.+++++++.++. .+.+....|+||+++|..
T Consensus 313 i~~~i~~~~~~---~v~~~---~~-------~~-~~~~-~~~~~~~~v~~l~~a~~~~~~~~~~~~~~~~ggtDa~~~~~ 377 (426)
T PRK07906 313 FLATVDELLGP---DVERE---WV-------HR-DPAL-ETPFDGPLVDAMNAALLAEDPGARVVPYMLSGGTDAKAFSR 377 (426)
T ss_pred HHHHHHHHhCC---CeEEE---Ee-------cC-CCCC-CCCCCcHHHHHHHHHHHHHCCCCeEeeeeecccCcHHHHHh
Confidence 88888776641 34444 32 22 3333 3567899999999999987532 223445678899999999
Q ss_pred cCCCeEEEccCCCC-----CCCCCCCCccccHHHHHHHHHHHHHHHHH
Q 013216 388 RGLPAIGFSPMANT-----PILLHDHNEFLNQAEYLKGIDIYESIIKA 430 (447)
Q Consensus 388 ~g~p~~~~gp~~~~-----~~~~H~~~E~v~~~~l~~~~~~~~~~l~~ 430 (447)
.|+|++.|||+... ..++|++||+++++++.+++++|+.++..
T Consensus 378 ~g~p~~~~gp~~~~~~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~ 425 (426)
T PRK07906 378 LGIRCYGFAPLRLPPDLDFAALFHGVDERVPVDALRFGVRVLDRFLRT 425 (426)
T ss_pred cCCceEEEeccccCccccccccCcCCCCceeHHHHHHHHHHHHHHHHh
Confidence 99999999997521 13689999999999999999999999865
No 15
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=1.5e-54 Score=430.62 Aligned_cols=358 Identities=20% Similarity=0.268 Sum_probs=286.7
Q ss_pred HHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecC--CCCeEEEEecCCCCCCCeEEEeeccccCCCCCCCC
Q 013216 32 ERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAK--NKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKW 109 (447)
Q Consensus 32 ~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~--~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~~~W 109 (447)
++|++|++|||+|+. ++.+++++|.++|+++|++++.++..+ +++||++.+.++ +.++|+|+|||||||.+++.|
T Consensus 1 ~~l~~lv~i~S~s~~-~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~--~~~~i~l~~H~Dtvp~~~~~w 77 (364)
T TIGR01892 1 EILTKLVAFDSTSFR-PNVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPS--GAGGLALSGHTDVVPYDDAAW 77 (364)
T ss_pred ChHHHhhCcCCcCCc-cHHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCC--CCCeEEEEcccccccCCCCcC
Confidence 368999999999732 347999999999999999988765432 368999998553 347899999999999988899
Q ss_pred CcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCceEE
Q 013216 110 SHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGI 189 (447)
Q Consensus 110 ~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~ 189 (447)
+++||++.++ +|++||||++|||++++++|.|++.|++.+ ++++|.|+|+++||+|+ .|++++++++.+ +.|.++
T Consensus 78 ~~~Pf~~~~~-~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~g~-~G~~~~~~~~~~-~~d~~i 152 (364)
T TIGR01892 78 TRDPFRLTEK-DGRLYGRGTCDMKGFLACALAAAPDLAAEQ--LKKPLHLALTADEEVGC-TGAPKMIEAGAG-RPRHAI 152 (364)
T ss_pred CCCCCcceee-CCEEEecCccccchHHHHHHHHHHHHHhcC--cCCCEEEEEEeccccCC-cCHHHHHHhcCC-CCCEEE
Confidence 9999999997 999999999999999999999999998754 57899999999999986 699999987653 346655
Q ss_pred EEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCccee
Q 013216 190 VLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSV 268 (447)
Q Consensus 190 ~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~ 268 (447)
+. +|+. ..++.+++|..+++|+++|+++|++.|+.| ||+..+++++..|+.+....... ..........+++
T Consensus 153 ~~-----ep~~-~~~~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~-~~~~~~~~~~~~~ 225 (364)
T TIGR01892 153 IG-----EPTR-LIPVRAHKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLRE-DLDEGFTPPYTTL 225 (364)
T ss_pred EC-----CCCC-ceeEEeeceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccC-CCCccCCCCCceE
Confidence 53 5654 456778999999999999999999999999 99999999999998764211000 0000000124689
Q ss_pred eeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccC---CCCceEeeccccccccccccCCCCc
Q 013216 269 NMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA---SRNMTFELGQFKQRASLHDKFGRPI 345 (447)
Q Consensus 269 ~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~ 345 (447)
+++.+++|. ..|+||++|++.+|+|+.|.++.+++.++|+++++.. .++.+++ ++. ....|+
T Consensus 226 ~i~~i~gg~------~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~v~---~~~------~~~~~~ 290 (364)
T TIGR01892 226 NIGVIQGGK------AVNIIPGACEFVFEWRPIPGMDPEELLQLLETIAQALVRDEPGFEVQ---IEV------VSTDPG 290 (364)
T ss_pred EEeeeecCC------CCcccCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhhCCCceEE---EEE------ccCCCC
Confidence 999999886 8999999999999999999999999999999888632 3445555 431 233444
Q ss_pred ccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHH
Q 013216 346 LTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYE 425 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~ 425 (447)
+ ..+.++++++.+.++... . +...++++|+++|...|+|++.|||+... ..|++||+++++++.+++++|.
T Consensus 291 ~-~~~~~~~~v~~~~~~~~~---~---~~~~~~~tD~~~~~~~gip~v~~Gpg~~~--~~H~~~E~i~i~~l~~~~~~~~ 361 (364)
T TIGR01892 291 V-NTEPDAELVAFLEELSGN---A---PEVVSYGTEAPQFQELGAEAVVCGPGDIR--QAHQPDEYVEIEDLVRCRAVLA 361 (364)
T ss_pred c-CCCCCCHHHHHHHHHhCC---C---CceecccccHHHHHhCCCcEEEECCCChH--hCCCCCceeeHHHHHHHHHHHH
Confidence 3 456678999988765422 2 23456789999999999999999998643 6899999999999999999998
Q ss_pred HHH
Q 013216 426 SII 428 (447)
Q Consensus 426 ~~l 428 (447)
.++
T Consensus 362 ~~~ 364 (364)
T TIGR01892 362 RLV 364 (364)
T ss_pred HhC
Confidence 763
No 16
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=5e-54 Score=435.56 Aligned_cols=383 Identities=19% Similarity=0.233 Sum_probs=295.3
Q ss_pred hHHHHHHHhhhcccCCCCCCC-hhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCCC
Q 013216 28 DSIIERFRAYLQIDTSQPNPD-YTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP 106 (447)
Q Consensus 28 ~~~~~~l~~l~~ips~s~~~~-e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~ 106 (447)
++++++|++|++|||+|+.++ +.++++||.++|+++|++++..+. .+++||++.+++ + .+|+|+|+|||||||+++
T Consensus 2 ~~~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~-~~~~~lia~~~~-~-~~~~vll~gH~DvVp~~~ 78 (436)
T PRK06446 2 DEELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERT-KGHPVVYGEINV-G-AKKTLLIYNHYDVQPVDP 78 (436)
T ss_pred hhHHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEec-CCCCEEEEEecC-C-CCCEEEEEecccCCCCCc
Confidence 578999999999999974322 279999999999999999987654 378899999853 2 358999999999999987
Q ss_pred -CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHcccc-ccC
Q 013216 107 -SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHV-FNS 184 (447)
Q Consensus 107 -~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~-~~~ 184 (447)
+.|+++||++.++ ||+|||||++|||++++++|.|++.|++.+ .++.+|.|+|+++||+|+ .|++.++++.. .-+
T Consensus 79 ~~~W~~~Pf~~~~~-dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~-~g~~~~l~~~~~~~~ 155 (436)
T PRK06446 79 LSEWKRDPFSATIE-NGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGS-PNLEDFIEKNKNKLK 155 (436)
T ss_pred cccccCCCCceEEE-CCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCC-HhHHHHHHHHHHHhC
Confidence 8899999999997 999999999999999999999999988765 578899999999999987 68888887632 223
Q ss_pred CceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEee--cCCccCCCCCC-CHHHHHHHHHHHHHhchh------------
Q 013216 185 LNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARG--APGHGAKLYDN-SAMENLFKSIESVRRFRA------------ 249 (447)
Q Consensus 185 ~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G--~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~------------ 249 (447)
.|++++ +.....+.+...++.++||..+++++++| +++|+|.|+.+ ||+..+++++.+|.+...
T Consensus 156 ~d~vi~-E~~~~~~~~~~~i~~~~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~ 234 (436)
T PRK06446 156 ADSVIM-EGAGLDPKGRPQIVLGVKGLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVR 234 (436)
T ss_pred CCEEEE-CCCCccCCCCeEEEEecCeEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCC
Confidence 466553 32222233345789999999999999999 99999999888 999999999999976420
Q ss_pred ----hhHHHHHh------------c------------cccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecC
Q 013216 250 ----SQFDLVKA------------G------------LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVP 301 (447)
Q Consensus 250 ----~~~~~~~~------------~------------~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~ 301 (447)
.....+.. + .......++++++.+++|.. ++...|+||++|++.+|+|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~--~~~~~nvvP~~a~~~~d~R~~ 312 (436)
T PRK06446 235 ELTEEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYT--GKGSKTIVPSRAFAKLDFRLV 312 (436)
T ss_pred CCCHHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeecccc--CCCCCcEecCceEEEEEEEcC
Confidence 00000000 0 00011246899999988742 222679999999999999999
Q ss_pred CCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceec-CCCc
Q 013216 302 PTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIF-PAST 380 (447)
Q Consensus 302 ~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~g~~ 380 (447)
|.++.+++.++|+++++.....++++ +. ....|. .++.++|+++.+.+++++..+..+..... +|++
T Consensus 313 p~~~~~~v~~~l~~~~~~~~~~~~~~---~~-------~~~~p~--~~~~~~~~v~~l~~a~~~~~g~~~~~~~~~~g~~ 380 (436)
T PRK06446 313 PNQDPYKIFELLKKHLQKVGFNGEII---VH-------GFEYPV--RTSVNSKVVKAMIESAKRVYGTEPVVIPNSAGTQ 380 (436)
T ss_pred CCCCHHHHHHHHHHHHHHcCCCeEEE---Ec-------CCccee--ecCCCCHHHHHHHHHHHHHhCCCCceecCCCCcc
Confidence 99999999999999987432334444 22 233443 35568999999999999986543233323 4566
Q ss_pred chHHHHH-cCCCeE--EEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013216 381 DARYFRE-RGLPAI--GFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 432 (447)
Q Consensus 381 D~~~~~~-~g~p~~--~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~ 432 (447)
|+++|.+ .|+|++ .|||+..+ .++|++||+++++++.+++++|..++..++
T Consensus 381 d~~~~~~~~gip~v~~~~g~g~~~-~~~H~~dE~i~i~~l~~~~~~~~~~~~~~~ 434 (436)
T PRK06446 381 PMGLFVYKLGIRDIVSAIGVGGYY-SNAHAPNENIRIDDYYKAIKHTEEFLKLYS 434 (436)
T ss_pred hHHHHHHHhCCCcceeecccCCCC-cCCcCCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 8887755 699975 36665322 379999999999999999999999998775
No 17
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.5e-54 Score=432.24 Aligned_cols=368 Identities=21% Similarity=0.253 Sum_probs=293.5
Q ss_pred hHHHHHHHhhhcccCCCCCCCh-hHHHHHHHHHHHHCCCceEEEeec-CCCCeEEEEecCCCCCCCeEEEeeccccCCCC
Q 013216 28 DSIIERFRAYLQIDTSQPNPDY-TNASKFILAQAEALSLESQTLEFA-KNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (447)
Q Consensus 28 ~~~~~~l~~l~~ips~s~~~~e-~~~~~~i~~~l~~~G~~~~~~~~~-~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~ 105 (447)
.+++++|++|++|||+| +++ .+++++|.++|+++|++++.++.. .+++||++.+++. ..|+|+|+|||||||++
T Consensus 4 ~~~~~~l~~lv~i~S~s--~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~--~~~~ill~~H~Dtv~~~ 79 (385)
T PRK07522 4 MSSLDILERLVAFDTVS--RDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPA--DRGGIVLSGHTDVVPVD 79 (385)
T ss_pred hhHHHHHHHHhCCCCcC--CCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCC--CCCeEEEEeecccccCC
Confidence 57899999999999987 454 599999999999999998765433 2568999998544 24899999999999998
Q ss_pred CCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccc--c
Q 013216 106 PSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVF--N 183 (447)
Q Consensus 106 ~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~--~ 183 (447)
++.|+.+||++.++ ||++||||++|||++++++|.|++.|.+.+ ++++|.|+|+++||.|+ .|++++++.... .
T Consensus 80 ~~~W~~~pf~~~~~-~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~i~~~~~~dEE~g~-~G~~~l~~~~~~~~~ 155 (385)
T PRK07522 80 GQAWTSDPFRLTER-DGRLYGRGTCDMKGFIAAALAAVPELAAAP--LRRPLHLAFSYDEEVGC-LGVPSMIARLPERGV 155 (385)
T ss_pred CCCCCCCCCceEEE-CCEEEeccccccchHHHHHHHHHHHHHhCC--CCCCEEEEEEeccccCC-ccHHHHHHHhhhcCC
Confidence 88999999999997 999999999999999999999999998864 57899999999999886 699999875321 1
Q ss_pred CCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccC
Q 013216 184 SLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAE 262 (447)
Q Consensus 184 ~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 262 (447)
..|++++. +|+. ..++.+++|..+++|+++|+++|+|.|+.+ ||+..+++++..|+++...............
T Consensus 156 ~~d~~i~~-----ep~~-~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 229 (385)
T PRK07522 156 KPAGCIVG-----EPTS-MRPVVGHKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAPGPFDALFD 229 (385)
T ss_pred CCCEEEEc-----cCCC-CeeeeeecceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC
Confidence 24555543 4654 578899999999999999999999999888 9999999999999875432110000000000
Q ss_pred CCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc--------CCCCceEeecccccc
Q 013216 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--------ASRNMTFELGQFKQR 334 (447)
Q Consensus 263 ~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--------~~~~~~~~~~~~~~~ 334 (447)
...++++++.+++|. ..|+||++|++.+|+|+.|.++.+++.++|++.++. ..++++++ ++.
T Consensus 230 ~~~~t~~i~~i~gG~------~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~v~---~~~- 299 (385)
T PRK07522 230 PPYSTLQTGTIQGGT------ALNIVPAECEFDFEFRNLPGDDPEAILARIRAYAEAELLPEMRAVHPEAAIE---FEP- 299 (385)
T ss_pred CCcceeEEeeeecCc------cccccCCceEEEEEEccCCCCCHHHHHHHHHHHHHhhcchhhhhhcCCCcEE---EEe-
Confidence 113688999999876 889999999999999999999999999999988864 12344454 331
Q ss_pred ccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccH
Q 013216 335 ASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQ 414 (447)
Q Consensus 335 ~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~ 414 (447)
...+|++ ..+.++++++.++++..+ . ......+++|+++|+..|+|++.|||+... .+|++||++++
T Consensus 300 -----~~~~~~~-~~~~~~~~v~~~~~~~~~----~-~~~~~~~~td~~~~~~~gip~v~~Gpg~~~--~~H~~~E~i~i 366 (385)
T PRK07522 300 -----LSAYPGL-DTAEDAAAARLVRALTGD----N-DLRKVAYGTEAGLFQRAGIPTVVCGPGSIE--QAHKPDEFVEL 366 (385)
T ss_pred -----ccCCCCC-CCCCCcHHHHHHHHHhCC----C-CcceEeeecchHHhccCCCCEEEECCCChh--hCCCCCccccH
Confidence 2234444 456678988888775433 2 122345789999999889999999998654 69999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013216 415 AEYLKGIDIYESIIKAYA 432 (447)
Q Consensus 415 ~~l~~~~~~~~~~l~~l~ 432 (447)
+++.+++++|..++..++
T Consensus 367 ~~l~~~~~~~~~~~~~~~ 384 (385)
T PRK07522 367 AQLAACEAFLRRLLASLA 384 (385)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999998875
No 18
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=5.2e-54 Score=431.12 Aligned_cols=377 Identities=24% Similarity=0.369 Sum_probs=301.3
Q ss_pred CCChhHHHHHHHhhhcccCCCCC-CChhHHHHHHHHHHHHCCCceEEEeecCC--------CCeEEEEecCCCCCCCeEE
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPN-PDYTNASKFILAQAEALSLESQTLEFAKN--------KPLILLKWPGSNPQLPSIL 94 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~-~~e~~~~~~i~~~l~~~G~~~~~~~~~~~--------~~nl~~~~~g~~~~~~~il 94 (447)
++..++++++|++|++|||+|++ .++.++++||.++|+++|++++..+...+ ++|+++.. +.+ .|+|+
T Consensus 2 ~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~il 78 (394)
T PRK08651 2 EAMMFDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARR-GSG--NPHLH 78 (394)
T ss_pred chhHHHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEe-CCC--CceEE
Confidence 34678999999999999999853 45778999999999999999887654322 35678765 332 38999
Q ss_pred EeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHH
Q 013216 95 LNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAE 174 (447)
Q Consensus 95 l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~ 174 (447)
|+|||||||.++..|+.+||.+.++ +|++||||++|||++++++|.|++.|.+.+ +++|.|+|+++||+|+ .|++
T Consensus 79 l~~HlDtvp~~~~~~~~~Pf~~~~~-~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~-~G~~ 153 (394)
T PRK08651 79 FNGHYDVVPPGEGWSVNVPFEPKVK-DGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGG-TGTG 153 (394)
T ss_pred EEeeeeeecCCCCccccCCCCcEEE-CCEEEecCccccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccc-hhHH
Confidence 9999999999864479999999997 999999999999999999999999998765 6899999999999986 7999
Q ss_pred HHHccccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHH
Q 013216 175 KFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFD 253 (447)
Q Consensus 175 ~~~~~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~ 253 (447)
++++++.++ .|.+++.+ |+....++.+++|..+++|+++|+++|++.|+.| ||+..+++++..|..+......
T Consensus 154 ~~~~~~~~~-~d~~i~~~-----~~~~~~i~~~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~ 227 (394)
T PRK08651 154 YLVEEGKVT-PDYVIVGE-----PSGLDNICIGHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKS 227 (394)
T ss_pred HHHhccCCC-CCEEEEec-----CCCCCceEEecccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhc
Confidence 999876554 46666654 4442368889999999999999999999999988 9999999999999765331110
Q ss_pred HHHhccccCCCcceeeeee--eecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccC--CCCceEeec
Q 013216 254 LVKAGLKAEGEVVSVNMAF--LKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFELG 329 (447)
Q Consensus 254 ~~~~~~~~~~~~~t~~~~~--i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~ 329 (447)
... ........++++++. +++|. ..|+||++|++.+|+|+.|.++.+++.++|+++++.. ..+++++
T Consensus 228 ~~~-~~~~~~~~~~~~ig~~~i~gG~------~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~-- 298 (394)
T PRK08651 228 KYE-YDDERGAKPTVTLGGPTVEGGT------KTNIVPGYCAFSIDRRLIPEETAEEVRDELEALLDEVAPELGIEVE-- 298 (394)
T ss_pred ccc-ccccccCCCceeecceeeeCCC------CCCccCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhccCCCee--
Confidence 000 000011234677777 77776 8999999999999999999999999999999888732 2344444
Q ss_pred cccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCC
Q 013216 330 QFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHN 409 (447)
Q Consensus 330 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~ 409 (447)
+.. ....|++ ..+.++++++.+++++++..+..+.+..+.|++|+++|...|+|++.|||+... ..|++|
T Consensus 299 -i~~------~~~~~~~-~~~~~~~l~~~~~~a~~~~~g~~~~~~~~~g~tD~~~~~~~gip~v~~Gpg~~~--~~H~~~ 368 (394)
T PRK08651 299 -FEI------TPFSEAF-VTDPDSELVKALREAIREVLGVEPKKTISLGGTDARFFGAKGIPTVVYGPGELE--LAHAPD 368 (394)
T ss_pred -EEE------ecccCCc-cCCCCCHHHHHHHHHHHHHhCCCCceeeecCcccHHHHhhCCCcEEEECCCChH--hcCCCC
Confidence 331 1223333 356678999999999999654433556677999999999999999999998643 699999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHh
Q 013216 410 EFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 410 E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
|+++++++.+++++|.+++..+++
T Consensus 369 E~i~~~~l~~~~~i~~~~i~~l~~ 392 (394)
T PRK08651 369 EYVEVKDVEKAAKVYEEVLKRLAK 392 (394)
T ss_pred ceeEHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999998854
No 19
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=4.3e-54 Score=430.14 Aligned_cols=368 Identities=21% Similarity=0.287 Sum_probs=292.4
Q ss_pred hhHHHHHHHhhhcccCCCCCC-----ChhHHHHHHHHHHHHCCCceEEEeec--CCCCeEEEEecCCCCCCCeEEEeecc
Q 013216 27 DDSIIERFRAYLQIDTSQPNP-----DYTNASKFILAQAEALSLESQTLEFA--KNKPLILLKWPGSNPQLPSILLNSHT 99 (447)
Q Consensus 27 ~~~~~~~l~~l~~ips~s~~~-----~e~~~~~~i~~~l~~~G~~~~~~~~~--~~~~nl~~~~~g~~~~~~~ill~~H~ 99 (447)
.++++++|++|++|||+|+.. ++.++++||.++|+++|++++.++.. .+++|+++++ |.+ .++|+|+|||
T Consensus 4 ~~~~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~-g~~--~~~il~~~H~ 80 (383)
T PRK05111 4 LPSFIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASL-GSG--EGGLLLAGHT 80 (383)
T ss_pred chHHHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEe-CCC--CCeEEEEeee
Confidence 347999999999999997422 24679999999999999998866542 2567999998 543 2679999999
Q ss_pred ccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHcc
Q 013216 100 DVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADS 179 (447)
Q Consensus 100 Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~ 179 (447)
||||+.+..|+.+||++.++ ||++||||++|||++++++|.|++.|.+.+ ++++|.|+|+++||+|+ .|+++++++
T Consensus 81 Dvvp~~~~~W~~~Pf~~~~~-~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~g~-~G~~~~~~~ 156 (383)
T PRK05111 81 DTVPFDEGRWTRDPFTLTEH-DGKLYGLGTADMKGFFAFILEALRDIDLTK--LKKPLYILATADEETSM-AGARAFAEA 156 (383)
T ss_pred ceecCCCCcCcCCCCccEEE-CCEEEecccccccHHHHHHHHHHHHHhhcC--CCCCeEEEEEeccccCc-ccHHHHHhc
Confidence 99999877899999999997 999999999999999999999999998753 57899999999999986 699999987
Q ss_pred ccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhc
Q 013216 180 HVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAG 258 (447)
Q Consensus 180 ~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~ 258 (447)
+.+. .|++++. +|+. ..++.+++|..+++|+++|+++|+|.|+.| ||+..+++++..|+.+.....+....
T Consensus 157 ~~~~-~d~~i~~-----ep~~-~~~~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~- 228 (383)
T PRK05111 157 TAIR-PDCAIIG-----EPTS-LKPVRAHKGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYHN- 228 (383)
T ss_pred CCCC-CCEEEEc-----CCCC-CceeecccceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCCC-
Confidence 6554 3665553 4654 456789999999999999999999999999 99999999999987754211000000
Q ss_pred cccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccC--CCCceEeecccccccc
Q 013216 259 LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFELGQFKQRAS 336 (447)
Q Consensus 259 ~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~ 336 (447)
.......++++++.+++|. ..|+||++|++.+|+|+.|.++.+++.++|++.++.. ..+.+++ +..
T Consensus 229 ~~~~~~~~t~~i~~i~gg~------~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~---~~~--- 296 (383)
T PRK05111 229 PAFTVPYPTLNLGHIHGGD------APNRICGCCELHFDIRPLPGMTLEDLRGLLREALAPVSERWPGRIT---VAP--- 296 (383)
T ss_pred ccCCCCCCceeEeeeecCC------cCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhCCCeEE---Eec---
Confidence 0000124689999999887 8999999999999999999999999999999888632 2334555 331
Q ss_pred ccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHH
Q 013216 337 LHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAE 416 (447)
Q Consensus 337 ~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~ 416 (447)
.....|++ ..+.++++++.+.+++ +.. +...++++|+.++...|+|++.|||+... .+|++||++++++
T Consensus 297 --~~~~~~~~-~~~~~~~l~~~~~~~~---g~~---~~~~~~~~Da~~~~~~g~p~v~~G~g~~~--~~H~~~E~v~~~~ 365 (383)
T PRK05111 297 --LHPPIPGY-ECPADHQLVRVVEKLL---GHK---AEVVNYCTEAPFIQQLGCPTLVLGPGSIE--QAHQPDEYLELSF 365 (383)
T ss_pred --cccCCCCc-CCCCCCHHHHHHHHHh---CCC---CceeeeeccHHHHHhcCCCEEEECCCchH--hCcCCCCcccHHH
Confidence 01233433 3456788888876654 222 22345789999999999999999998633 6999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 013216 417 YLKGIDIYESIIKAYA 432 (447)
Q Consensus 417 l~~~~~~~~~~l~~l~ 432 (447)
+.+++++|..++..++
T Consensus 366 l~~~~~i~~~~~~~~~ 381 (383)
T PRK05111 366 IKPTRELLRQLIHHFC 381 (383)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998875
No 20
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=6.7e-54 Score=430.36 Aligned_cols=380 Identities=17% Similarity=0.195 Sum_probs=302.4
Q ss_pred CCCCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeecccc
Q 013216 22 SPAKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDV 101 (447)
Q Consensus 22 ~~~~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dt 101 (447)
..+.+.+++++++++|++|||+| ++|.+++++|.++|+++|+++..++ +..|+++.+.+. .|+|+|++|+||
T Consensus 9 ~~~~~~~~~~~~l~~lv~ips~s--~~e~~~a~~l~~~l~~~G~~~~~~~---~~~n~~a~~~~~---~~~i~~~~H~Dt 80 (399)
T PRK13004 9 LAEKYKADMTRFLRDLIRIPSES--GDEKRVVKRIKEEMEKVGFDKVEID---PMGNVLGYIGHG---KKLIAFDAHIDT 80 (399)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCC--CchHHHHHHHHHHHHHcCCcEEEEc---CCCeEEEEECCC---CcEEEEEeccCc
Confidence 44567789999999999999986 7899999999999999999865443 456999988543 289999999999
Q ss_pred CCCCC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccc
Q 013216 102 VPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH 180 (447)
Q Consensus 102 vp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 180 (447)
||+++ ++|+++||++.++ ||++||||++|||++++++|.|++.|.+.+..++++|.|+|+++||.++..|+++++++.
T Consensus 81 Vp~~~~~~w~~~P~~~~~~-~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~~ 159 (399)
T PRK13004 81 VGIGDIKNWDFDPFEGEED-DGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEED 159 (399)
T ss_pred cCCCChhhcccCCCccEEE-CCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHhc
Confidence 99976 7899999999997 999999999999999999999999999988778999999999999964325788888764
Q ss_pred cccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhcc
Q 013216 181 VFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGL 259 (447)
Q Consensus 181 ~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~ 259 (447)
.+. .|++++.+ |+. ..++.+++|..+++|+++|+++|++.|+.| ||+..+++++..|+.+..... .
T Consensus 160 ~~~-~d~~i~~e-----~~~-~~i~~~~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~----~-- 226 (399)
T PRK13004 160 KIK-PDFVVITE-----PTD-LNIYRGQRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLK----E-- 226 (399)
T ss_pred CCC-CCEEEEcc-----CCC-CceEEecceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccc----c--
Confidence 443 57777753 443 578899999999999999999999999999 999999999999987643210 0
Q ss_pred ccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccc-c-c--
Q 013216 260 KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQ-R-A-- 335 (447)
Q Consensus 260 ~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~-~-~-- 335 (447)
.......+++++.+++|. ...|+||++|++.+|+|+.|.++.+++.++|+++......+.+++ +.. . +
T Consensus 227 ~~~~~~~~~~v~~i~~g~-----~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~v~---~~~~~~~~~ 298 (399)
T PRK13004 227 DPFLGKGTLTVSDIFSTS-----PSRCAVPDSCAISIDRRLTVGETWESVLAEIRALPAVKKANAKVS---MYNYDRPSY 298 (399)
T ss_pred CCcCCCceEEEeeeecCC-----CCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHHHhhccccceEE---EecccCCCc
Confidence 001112467888887653 279999999999999999999999999999988854222233343 210 0 0
Q ss_pred ---cccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHH-HHcCCCeEEEccCCCCCCCCCCCCcc
Q 013216 336 ---SLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYF-RERGLPAIGFSPMANTPILLHDHNEF 411 (447)
Q Consensus 336 ---~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~-~~~g~p~~~~gp~~~~~~~~H~~~E~ 411 (447)
.+......|++ .++.++|+++.+.+++++..+..+.+...++++|++.+ +.+|+|++.|||+... .+|++||+
T Consensus 299 ~~~~~~~~~~~p~~-~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~td~~~~~~~~Gip~v~~Gpg~~~--~aH~~nE~ 375 (399)
T PRK13004 299 TGLVYPTECYFPTW-LYPEDHEFVKAAVEAYKGLFGKAPEVDKWTFSTNGVSIAGRAGIPTIGFGPGKEP--LAHAPNEY 375 (399)
T ss_pred cccccccccccccc-ccCCCCHHHHHHHHHHHHHhCCCCeecccccccCCeEEehhcCCCEEEECCCccc--ccCCCCce
Confidence 00011233444 46778999999999999985543244456678887765 4679999999998643 69999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhh
Q 013216 412 LNQAEYLKGIDIYESIIKAYASY 434 (447)
Q Consensus 412 v~~~~l~~~~~~~~~~l~~l~~~ 434 (447)
++++++.+++++|..++..+++.
T Consensus 376 i~i~~l~~~~~~~~~~~~~~~~~ 398 (399)
T PRK13004 376 TWKEQLVKAAAMYAAIPKSLLKK 398 (399)
T ss_pred eEHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999853
No 21
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=7.9e-54 Score=429.29 Aligned_cols=377 Identities=16% Similarity=0.167 Sum_probs=297.8
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccC
Q 013216 23 PAKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVV 102 (447)
Q Consensus 23 ~~~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtv 102 (447)
.+...+++++++++|++|||+| ++|.+++++|.++|+++|+++...+ ...|+++.+ |.+ .++|+|+||+|||
T Consensus 8 ~~~~~~~~~~~l~~Lv~ips~s--~~e~~~~~~l~~~l~~~g~~~~~~~---~~~~v~~~~-g~~--~~~l~l~~H~DtV 79 (395)
T TIGR03526 8 AEKYRGDMIRFLRDLVAIPSES--GDEGRVALRIKQEMEKLGFDKVEID---PMGNVLGYI-GHG--PKLIAMDAHIDTV 79 (395)
T ss_pred HHHHHHHHHHHHHHHhcCCCCC--CchHHHHHHHHHHHHHcCCceEEEc---CCCcEEEEe-CCC--CCEEEEEeecccc
Confidence 3456689999999999999986 7888999999999999999854332 345899987 442 3789999999999
Q ss_pred CCCC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHcccc
Q 013216 103 PSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHV 181 (447)
Q Consensus 103 p~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~ 181 (447)
|+++ +.|+++||.+.++ ||++||||++|||++++++|.|++.|.+.+..++.++.|+++++||.++..|...+++++.
T Consensus 80 p~~~~~~W~~~Pf~~~~~-~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~ 158 (395)
T TIGR03526 80 GIGDMDQWQFDPYEGYED-EEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDK 158 (395)
T ss_pred CCCCcccccCCCCceEEE-CCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccC
Confidence 9976 7899999999997 9999999999999999999999999999887677899999999999532246777776654
Q ss_pred ccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccc
Q 013216 182 FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLK 260 (447)
Q Consensus 182 ~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 260 (447)
+. .|++++. +|+. ..+..+++|..+++|+++|+++|++.|+.| ||+..+++++..|+.+.... .. ..
T Consensus 159 ~~-~d~~i~~-----ep~~-~~i~~g~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~----~~-~~ 226 (395)
T TIGR03526 159 IK-PEFVVIT-----EPTD-MNIYRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANL----VE-DP 226 (395)
T ss_pred CC-CCEEEec-----CCCC-ceEEEEcceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhh----cC-Cc
Confidence 43 5777664 4654 578899999999999999999999999999 99999999999998754311 00 00
Q ss_pred cCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccc--cccc-
Q 013216 261 AEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQ--RASL- 337 (447)
Q Consensus 261 ~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~--~~~~- 337 (447)
.....+++++.+++|.. ..|+||++|++.+|+|+.|.++.+++.++|+++++......+++ +.. .+..
T Consensus 227 -~~~~~~~~v~~i~~g~~-----~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~ 297 (395)
T TIGR03526 227 -FLGKGTLTVSEIFFSSP-----SRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQGAEAEVE---MYEYDRPSYT 297 (395)
T ss_pred -ccCccceeeeeeecCCC-----CCCccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHhcCCcceEE---Eecccccccc
Confidence 11125888898886632 78999999999999999999999999999998876322223333 211 0000
Q ss_pred ----cccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcch-HHHHHcCCCeEEEccCCCCCCCCCCCCccc
Q 013216 338 ----HDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDA-RYFRERGLPAIGFSPMANTPILLHDHNEFL 412 (447)
Q Consensus 338 ----~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~-~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v 412 (447)
......|++ .++.++|+++++.+++++.++..+.....++++|+ .++++.|+|++.|||+... .+|++||++
T Consensus 298 ~~~~~~~~~~p~~-~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~p~v~~Gpg~~~--~aH~~dE~i 374 (395)
T TIGR03526 298 GLVYPTECYFPTW-VLPEDHLITKAALETYKRLFGKEPGVDKWTFSTNGVSIMGRHGIPVIGFGPGDED--QAHAPNEKT 374 (395)
T ss_pred ccccccccccCcc-ccCCCCHHHHHHHHHHHHHhCCCCceeeeeeecccceehhhcCCCEEEECCcchh--hccCCCceE
Confidence 001123443 46778999999999999987654344455677787 4667789999999998643 699999999
Q ss_pred cHHHHHHHHHHHHHHHHHHH
Q 013216 413 NQAEYLKGIDIYESIIKAYA 432 (447)
Q Consensus 413 ~~~~l~~~~~~~~~~l~~l~ 432 (447)
+++++.+++++|..++..++
T Consensus 375 ~i~~l~~~~~~~~~~~~~~~ 394 (395)
T TIGR03526 375 WKEDLVKAAAMYAAIPTVYL 394 (395)
T ss_pred EHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999875
No 22
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=8e-54 Score=429.44 Aligned_cols=377 Identities=16% Similarity=0.169 Sum_probs=296.7
Q ss_pred CCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCC
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVP 103 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp 103 (447)
+...+++++++++|++|||+| ++|.+++++|.++|+++|++...++ .+.|+++.+ |. +.|+|+|+|||||||
T Consensus 9 ~~~~~~~~~~~~~lv~i~s~s--~~e~~~~~~l~~~l~~~G~~~~~~~---~~~n~~~~~-g~--~~~~l~l~~H~DtVp 80 (395)
T TIGR03320 9 KKYRGDMIRFLRDLVAIPSES--GDEKRVAERIKEEMEKLGFDKVEID---PMGNVLGYI-GH--GPKLIAMDAHIDTVG 80 (395)
T ss_pred HHHHHHHHHHHHHHHcCCCCC--CchHHHHHHHHHHHHHhCCcEEEEC---CCCCEEEEe-CC--CCcEEEEEecccccC
Confidence 446688999999999999985 7788999999999999999753332 345899987 43 237899999999999
Q ss_pred CCC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccc
Q 013216 104 SEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVF 182 (447)
Q Consensus 104 ~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~ 182 (447)
+++ ..|+++||.+.++ ||++||||++|||++++++|.|++.|.+.+..++++|.|+++++||.++..+.+.++++..+
T Consensus 81 ~~~~~~w~~~Pf~~~~~-~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~~ 159 (395)
T TIGR03320 81 IGDSKQWQFDPYEGYED-EEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDGI 159 (395)
T ss_pred CCCccccccCCCceEEE-CCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcCC
Confidence 976 7899999999997 99999999999999999999999999998877788999999999997542345666655434
Q ss_pred cCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhcccc
Q 013216 183 NSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKA 261 (447)
Q Consensus 183 ~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~ 261 (447)
. .|++++. +|+. ..++.+++|..+++|+++|+++|+|.|+.| ||+..+++++..|+.+.... . ...
T Consensus 160 ~-~d~~iv~-----ep~~-~~i~~g~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~----~--~~~ 226 (395)
T TIGR03320 160 K-PEFVVIT-----EPTD-MNIYRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANL----V--EDP 226 (395)
T ss_pred C-CCEEEEc-----CCCc-cceEEecceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhh----c--CCc
Confidence 3 5777765 4654 578899999999999999999999999999 99999999999998754211 0 000
Q ss_pred CCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccc--cccc--
Q 013216 262 EGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQ--RASL-- 337 (447)
Q Consensus 262 ~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~--~~~~-- 337 (447)
.....+++++.+.+|.. ..|+||++|++.+|+|+.|.++.+++.++|++++......++++ +.. .+..
T Consensus 227 ~~~~~t~~v~~i~~g~~-----~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~ 298 (395)
T TIGR03320 227 FLGKGTLTVSEIFFSSP-----SRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQGAEAKVE---MYNYDRPSYTG 298 (395)
T ss_pred ccCcCceeeeeeecCCC-----CcCccCCEEEEEEEEecCCCCCHHHHHHHHHHHHhhcCCCceEe---eeccCcccccc
Confidence 11124788888886632 78999999999999999999999999999998875322223333 210 0000
Q ss_pred ---cccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcch-HHHHHcCCCeEEEccCCCCCCCCCCCCcccc
Q 013216 338 ---HDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDA-RYFRERGLPAIGFSPMANTPILLHDHNEFLN 413 (447)
Q Consensus 338 ---~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~-~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~ 413 (447)
......|++ .++.++|+++.+.+++++..+..+.....++++|+ .++...|+|++.|||+... ++|++|||++
T Consensus 299 ~~~~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~p~v~~Gpg~~~--~aH~~nE~v~ 375 (395)
T TIGR03320 299 LVYPTECYFPTW-VLPEDHLITKAALETYKRLFGKEPGVDKWTFSTNGVSIMGRHGIPVIGFGPGDED--QAHAPNEKTW 375 (395)
T ss_pred cccccccccCcc-ccCCCCHHHHHHHHHHHHHhCCCCceeecceecccceehhhcCCCEEEECCCchh--hccCCCcEEE
Confidence 000123433 46778999999999999986654344455677787 5777889999999998653 6999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 013216 414 QAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 414 ~~~l~~~~~~~~~~l~~l~~ 433 (447)
++++.+++++|..++..++.
T Consensus 376 i~~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03320 376 KEDLVRAAAMYAAIPTVYLE 395 (395)
T ss_pred HHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999998863
No 23
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=6.1e-54 Score=431.54 Aligned_cols=366 Identities=18% Similarity=0.250 Sum_probs=296.9
Q ss_pred CCCCChhHHHHHHHhhhcccCCCCC-CChhHHHHHHHHHHHHCCCceEEEeecC--------------CCCeEEEEecCC
Q 013216 22 SPAKSDDSIIERFRAYLQIDTSQPN-PDYTNASKFILAQAEALSLESQTLEFAK--------------NKPLILLKWPGS 86 (447)
Q Consensus 22 ~~~~~~~~~~~~l~~l~~ips~s~~-~~e~~~~~~i~~~l~~~G~~~~~~~~~~--------------~~~nl~~~~~g~ 86 (447)
+.+.+.+++++.|.+|++|||.|.. ..+.++++||.++|+++|++++..+..+ ..+||++++++.
T Consensus 11 ~~~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~a~~~~~ 90 (402)
T PRK07338 11 LIDDRQAPMLEQLIAWAAINSGSRNLDGLARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGPALHVSVRPE 90 (402)
T ss_pred HHhhhHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCCeEEEEECCC
Confidence 3456789999999999999998632 1246899999999999999988654221 226999998654
Q ss_pred CCCCCeEEEeeccccCCCCCCCCCcCCCcee--eCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecC
Q 013216 87 NPQLPSILLNSHTDVVPSEPSKWSHHPFGAH--LDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPD 164 (447)
Q Consensus 87 ~~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~--~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~ 164 (447)
. .++|+|+|||||||+++ +||++. ++ ||+|||||++|||++++++|.|++.|.+.+.+++++|.|+|+++
T Consensus 91 ~--~~~lll~gH~DvVp~~~-----~Pf~~~~~~~-~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~d 162 (402)
T PRK07338 91 A--PRQVLLTGHMDTVFPAD-----HPFQTLSWLD-DGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVLINPD 162 (402)
T ss_pred C--CccEEEEeecCccCCCC-----CcccCCeEee-CCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEECC
Confidence 2 35799999999999863 799986 76 99999999999999999999999999988877788999999999
Q ss_pred cccCcccCHHHHHccccccCCceEEEEecCCcCcCC-cceeEeeeeeeEEEEEEEeecCCccCC-CCCC-CHHHHHHHHH
Q 013216 165 EEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTE-DYRAFYAERCPWWLVIKARGAPGHGAK-LYDN-SAMENLFKSI 241 (447)
Q Consensus 165 EE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~p~~-~~~i~~~~~G~~~~~i~v~G~~~Hs~~-p~~g-nai~~~~~~i 241 (447)
||+|+ .|++.++++... ..+++++++ |+. ...+..+++|..+++|+++|+++|+|. |+.| ||+..+++++
T Consensus 163 EE~g~-~g~~~~~~~~~~-~~~~~i~~e-----p~~~~~~v~~~~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~~~~i 235 (402)
T PRK07338 163 EEIGS-PASAPLLAELAR-GKHAALTYE-----PALPDGTLAGARKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAAAELA 235 (402)
T ss_pred cccCC-hhhHHHHHHHhc-cCcEEEEec-----CCCCCCcEEeecceeEEEEEEEEeEcccCCCCcccCccHHHHHHHHH
Confidence 99986 689988886432 346777775 332 246778899999999999999999996 7888 9999999999
Q ss_pred HHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccC-
Q 013216 242 ESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA- 320 (447)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~- 320 (447)
..|+.+... ...++++++.+++|. ..|+||++|++.+|+|+.|.++.+++.++|+++++..
T Consensus 236 ~~l~~l~~~------------~~~~t~~vg~i~gG~------~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~ 297 (402)
T PRK07338 236 LALHALNGQ------------RDGVTVNVAKIDGGG------PLNVVPDNAVLRFNIRPPTPEDAAWAEAELKKLIAQVN 297 (402)
T ss_pred HHHHhhhcc------------CCCcEEEEEEEecCC------CCceeccccEEEEEeccCCHHHHHHHHHHHHHHHhccc
Confidence 999775421 123589999999886 8999999999999999999999999999999998743
Q ss_pred -CCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeE-EEccC
Q 013216 321 -SRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAI-GFSPM 398 (447)
Q Consensus 321 -~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~-~~gp~ 398 (447)
..+++++ +.. ....|++.....+.++++.++++.++.+... ....++|++|++++...|+|++ .|||+
T Consensus 298 ~~~~~~~~---~~~------~~~~~p~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~~~g~tDa~~~~~~giP~v~~~Gpg 367 (402)
T PRK07338 298 QRHGVSLH---LHG------GFGRPPKPIDAAQQRLFEAVQACGAALGLTI-DWKDSGGVCDGNNLAAAGLPVVDTLGVR 367 (402)
T ss_pred cCCCeEEE---EEc------cccCCCCCCCcchHHHHHHHHHHHHHcCCCc-ccccCCccchHHHHhhcCCCeEeccCCC
Confidence 3455555 331 1233443223344589999999988876554 4456779999999999999999 79998
Q ss_pred CCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 399 ANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 399 ~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
.. ..|++|||++++++.+++++|+.++..++.
T Consensus 368 ~~---~~H~~~E~v~i~~l~~~~~~~~~~l~~~~~ 399 (402)
T PRK07338 368 GG---NIHSEDEFVILDSLVERAQLSALILMRLAQ 399 (402)
T ss_pred CC---CCCCccceEehhhHHHHHHHHHHHHHHHhc
Confidence 54 589999999999999999999999998753
No 24
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=3.1e-53 Score=426.43 Aligned_cols=367 Identities=17% Similarity=0.237 Sum_probs=295.0
Q ss_pred CChhHHHHHHHhhhcccCCCCC-CChhHHHHHHHHHHHHCCCceEEEeecC-CCCeEEEEecCCCCCCCeEEEeeccccC
Q 013216 25 KSDDSIIERFRAYLQIDTSQPN-PDYTNASKFILAQAEALSLESQTLEFAK-NKPLILLKWPGSNPQLPSILLNSHTDVV 102 (447)
Q Consensus 25 ~~~~~~~~~l~~l~~ips~s~~-~~e~~~~~~i~~~l~~~G~~~~~~~~~~-~~~nl~~~~~g~~~~~~~ill~~H~Dtv 102 (447)
.+.++++++|++|++|||+|+. .++.++++||.++|+++|++++..+..+ ..+||+++++|++ .|+|+|+||||||
T Consensus 34 ~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~~--~~~ill~~H~D~V 111 (410)
T PRK06133 34 QEQPAYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGTG--KRRIMLIAHMDTV 111 (410)
T ss_pred HhHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCCC--CceEEEEeecCcc
Confidence 4667899999999999999743 2245899999999999999988665422 3579999997653 4899999999999
Q ss_pred CCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccc
Q 013216 103 PSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVF 182 (447)
Q Consensus 103 p~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~ 182 (447)
|++ ..|+.+||. .+ +|++||||++|||++++++|.|++.|.+.+.+++++|.|+|+++||.|+ .|++.++++..
T Consensus 112 p~~-~~w~~~Pf~--~~-~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-~G~~~~~~~~~- 185 (410)
T PRK06133 112 YLP-GMLAKQPFR--ID-GDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGS-PGSRELIAELA- 185 (410)
T ss_pred CCC-CccCCCCEE--EE-CCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCC-ccHHHHHHHHh-
Confidence 986 459999996 65 9999999999999999999999999999887778999999999999986 69999997643
Q ss_pred cCCceEEEEecCCcCcCCc-ceeEeeeeeeEEEEEEEeecCCccC-CCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhcc
Q 013216 183 NSLNVGIVLDEGLASTTED-YRAFYAERCPWWLVIKARGAPGHGA-KLYDN-SAMENLFKSIESVRRFRASQFDLVKAGL 259 (447)
Q Consensus 183 ~~~~~~~~~d~g~~~p~~~-~~i~~~~~G~~~~~i~v~G~~~Hs~-~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~ 259 (447)
.+.|.+++++ |+.. ..++.+++|..+++|+++|+++|+| .|+.| ||+..+++++..|+.+...
T Consensus 186 ~~~d~~i~~e-----p~~~~~~v~~~~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~~~--------- 251 (410)
T PRK06133 186 AQHDVVFSCE-----PGRAKDALTLATSGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLGDP--------- 251 (410)
T ss_pred ccCCEEEEeC-----CCCCCCCEEEeccceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhccCC---------
Confidence 3457777775 3322 3578899999999999999999985 69988 9999999999988765321
Q ss_pred ccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc-CCCCceEeecccccccccc
Q 013216 260 KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP-ASRNMTFELGQFKQRASLH 338 (447)
Q Consensus 260 ~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~ 338 (447)
...++++++.+++|. ..|+||++|++.+|+|+.|.++.+++.++|+++++. ...+.+++ ++.
T Consensus 252 ---~~~~t~~~~~i~gG~------~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~---~~~----- 314 (410)
T PRK06133 252 ---AKGTTLNWTVAKAGT------NRNVIPASASAQADVRYLDPAEFDRLEADLQEKVKNKLVPDTEVT---LRF----- 314 (410)
T ss_pred ---CCCeEEEeeEEECCC------CCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHhccCCCCeEEE---EEe-----
Confidence 123578999999886 899999999999999999999999999999999874 22344555 331
Q ss_pred ccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCc--eecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHH
Q 013216 339 DKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKP--EIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAE 416 (447)
Q Consensus 339 ~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~ 416 (447)
...+|++.....+.++++.++++.++.+... .+ ..++|++|+++++..|+|++.+|++..+ .+.|++||++++++
T Consensus 315 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~g~tDa~~~~~~gip~v~~g~G~~~-~~aH~~nE~i~i~~ 391 (410)
T PRK06133 315 -ERGRPPLEANAASRALAEHAQGIYGELGRRL-EPIDMGTGGGTDAAFAAGSGKAAVLEGFGLVG-FGAHSNDEYIELNS 391 (410)
T ss_pred -ccccCCcccCcchHHHHHHHHHHHHHcCCCc-cccccCCCCCchHHHHHhcCCCceEecccCCC-CCCCCCCcEEEccc
Confidence 1234443223334578888888887765543 22 4567999999999999998874433221 26999999999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 013216 417 YLKGIDIYESIIKAYAS 433 (447)
Q Consensus 417 l~~~~~~~~~~l~~l~~ 433 (447)
+.+++++|..++.++++
T Consensus 392 ~~~~~~~~~~~~~~~~~ 408 (410)
T PRK06133 392 IVPRLYLLTRMIMELSR 408 (410)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999998875
No 25
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=3.3e-53 Score=421.00 Aligned_cols=362 Identities=15% Similarity=0.232 Sum_probs=291.5
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCCChh---HHHHHHHHHHHHCCCceEEEeecCCC-CeEEEEecCCCCCCCeEEEeec
Q 013216 23 PAKSDDSIIERFRAYLQIDTSQPNPDYT---NASKFILAQAEALSLESQTLEFAKNK-PLILLKWPGSNPQLPSILLNSH 98 (447)
Q Consensus 23 ~~~~~~~~~~~l~~l~~ips~s~~~~e~---~~~~~i~~~l~~~G~~~~~~~~~~~~-~nl~~~~~g~~~~~~~ill~~H 98 (447)
...+.++++++|++|++|||.+ +++. ++++|+.++|+++|++++.++..++. +|+++.+++.+++.|+|+|+||
T Consensus 6 ~~~~~~~~~~~l~~Lv~i~S~s--~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH 83 (376)
T PRK07473 6 LPFDSEAMLAGLRPWVECESPT--WDAAAVNRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGH 83 (376)
T ss_pred CCcCHHHHHHHHHHHhcCCCCC--CCHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEec
Confidence 4556889999999999999986 4444 66779999999999999876543332 5899998654334589999999
Q ss_pred cccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHc
Q 013216 99 TDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFAD 178 (447)
Q Consensus 99 ~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~ 178 (447)
|||||+. ..|+.+||. ++ ||++||||++|||++++++|.|+++|.+.+..++.+|.|+|+++||+|+ .|++.+++
T Consensus 84 ~DtV~~~-~~~~~~p~~--~~-~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~-~g~~~~~~ 158 (376)
T PRK07473 84 MDTVHPV-GTLEKLPWR--RE-GNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGT-PSTRDLIE 158 (376)
T ss_pred CCCCCCC-CCccCCCeE--EE-CCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCC-ccHHHHHH
Confidence 9999875 369999994 75 8999999999999999999999999999887777899999999999986 69999998
Q ss_pred cccccCCceEEEEecCCcCcCC-cceeEeeeeeeEEEEEEEeecCCccC-CCCCC-CHHHHHHHHHHHHHhchhhhHHHH
Q 013216 179 SHVFNSLNVGIVLDEGLASTTE-DYRAFYAERCPWWLVIKARGAPGHGA-KLYDN-SAMENLFKSIESVRRFRASQFDLV 255 (447)
Q Consensus 179 ~~~~~~~~~~~~~d~g~~~p~~-~~~i~~~~~G~~~~~i~v~G~~~Hs~-~p~~g-nai~~~~~~i~~l~~~~~~~~~~~ 255 (447)
++.. ..|++++.+ |+. ...++.+++|..+++|+++|+++|+| .|+.| ||+..+++++.+|+.+..
T Consensus 159 ~~~~-~~d~~iv~e-----p~~~~~~v~~~~~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~------ 226 (376)
T PRK07473 159 AEAA-RNKYVLVPE-----PGRPDNGVVTGRYAIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT------ 226 (376)
T ss_pred Hhhc-cCCEEEEeC-----CCCCCCCEEEECeeeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC------
Confidence 6433 357888875 443 23689999999999999999999986 58988 999999999999876532
Q ss_pred HhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccc
Q 013216 256 KAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRA 335 (447)
Q Consensus 256 ~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~ 335 (447)
..++++++.|++|. ..|+||++|++.+++|.......+++.+++.+.+. ...+++++ +..
T Consensus 227 --------~~~~~~vg~i~gg~------~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~~~-~~~~~~~~---~~~-- 286 (376)
T PRK07473 227 --------EDCTFSVGIVHGGQ------WVNCVATTCTGEALSMAKRQADLDRGVARMLALSG-TEDDVTFT---VTR-- 286 (376)
T ss_pred --------CCceEeEeeEEcCC------CCcCCCCceEEEEEEEeCCHhHHHHHHHHHHHhhC-cCCCeEEE---EEc--
Confidence 12488999999887 89999999999999999887788887777766655 22345555 331
Q ss_pred cccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEE-EccCCCCCCCCCCCCccccH
Q 013216 336 SLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIG-FSPMANTPILLHDHNEFLNQ 414 (447)
Q Consensus 336 ~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~-~gp~~~~~~~~H~~~E~v~~ 414 (447)
....|++.....+.++++.++++.+..+.+. ....++|+||+++++..|+|++. |||++. ..|++|||+++
T Consensus 287 ----~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~~~g~tDa~~~~~~giP~v~g~Gpg~~---~~H~~dE~v~i 358 (376)
T PRK07473 287 ----GVTRPVWEPDAGTMALYEKARAIAGQLGLSL-PHGSAGGGSDGNFTGAMGIPTLDGLGVRGA---DYHTLNEHIEV 358 (376)
T ss_pred ----cccCCCCCCChhHHHHHHHHHHHHHHcCCCC-ccccCccccHhhhHHhcCCCEEEeccCCCC---CCCCCCceEec
Confidence 1234444222333478889888877777654 44566789999999999999995 999864 58999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 013216 415 AEYLKGIDIYESIIKAY 431 (447)
Q Consensus 415 ~~l~~~~~~~~~~l~~l 431 (447)
+++.+++++|++++..+
T Consensus 359 ~~l~~~~~vl~~~l~~~ 375 (376)
T PRK07473 359 DSLAERGRLMAGLLATL 375 (376)
T ss_pred ccHHHHHHHHHHHHHhc
Confidence 99999999999998754
No 26
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=5.1e-53 Score=431.70 Aligned_cols=393 Identities=20% Similarity=0.240 Sum_probs=302.6
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCC----ChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeec
Q 013216 23 PAKSDDSIIERFRAYLQIDTSQPNP----DYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSH 98 (447)
Q Consensus 23 ~~~~~~~~~~~l~~l~~ips~s~~~----~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H 98 (447)
.+.+.++++++|++|++|||+|+.. ++.+++++|.++|+++|++++.++.. +++||+++++|.+++.|+|+|+||
T Consensus 12 ~~~~~~~~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~~-~~~~l~a~~~g~~~~~~~lll~gH 90 (464)
T PRK09104 12 IDANLDASLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGFEASVRDTP-GHPMVVAHHEGPTGDAPHVLFYGH 90 (464)
T ss_pred HHHhHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCCeEEEEecC-CCCEEEEEecCCCCCCCEEEEEec
Confidence 3557889999999999999998432 24688999999999999999876643 778999999875455699999999
Q ss_pred cccCCCCC-CCCCcCCCceeeCCCC-----cEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccC
Q 013216 99 TDVVPSEP-SKWSHHPFGAHLDSQG-----NIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDG 172 (447)
Q Consensus 99 ~Dtvp~~~-~~W~~~Pf~~~~~~~g-----~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G 172 (447)
+||||+++ +.|+++||++.++ ++ +|||||++|||++++++|.|++.|++.+..++++|.|+|+++||+|+ .|
T Consensus 91 ~DvVp~~~~~~W~~~Pf~~~~~-~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-~g 168 (464)
T PRK09104 91 YDVQPVDPLDLWESPPFEPRIK-ETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEEESGS-PS 168 (464)
T ss_pred ccCCCCCCcccCCCCCCcceEe-cCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECccccCC-cc
Confidence 99999987 7799999999997 75 59999999999999999999999999776678899999999999987 58
Q ss_pred HHHHHcccc-ccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEee--cCCccCC-CCCC-CHHHHHHHHHHHHHhc
Q 013216 173 AEKFADSHV-FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARG--APGHGAK-LYDN-SAMENLFKSIESVRRF 247 (447)
Q Consensus 173 ~~~~~~~~~-~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G--~~~Hs~~-p~~g-nai~~~~~~i~~l~~~ 247 (447)
+..++.+.. ....|++++.+.+...+. ...++.++||..+++|+++| +++|+|. |+.+ ||+..+++++.+|.+.
T Consensus 169 ~~~~l~~~~~~~~~d~~iv~E~~~~~~~-~~~i~~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~~~l~~l~~~ 247 (464)
T PRK09104 169 LVPFLEANAEELKADVALVCDTGMWDRE-TPAITTSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRVLTRILAGLHDE 247 (464)
T ss_pred HHHHHHhhHHhcCCCEEEEeCCCCCCCC-CeEEEeecCCeEEEEEEEEeCCCCccccccCCccCCHHHHHHHHHHhccCC
Confidence 888776532 123588888875543222 35788999999999999999 6899997 5677 9999999999998763
Q ss_pred hhh-------------------hHHH--------HHh-cccc------------CCCcceeeeeeeecCCCCCCCccccc
Q 013216 248 RAS-------------------QFDL--------VKA-GLKA------------EGEVVSVNMAFLKAGTPSPNGFVMNL 287 (447)
Q Consensus 248 ~~~-------------------~~~~--------~~~-~~~~------------~~~~~t~~~~~i~~g~~~~~~~~~n~ 287 (447)
... .++. +.. +... ....+|++++.+++|.. ++...|+
T Consensus 248 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~--~~~~~nv 325 (464)
T PRK09104 248 TGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYT--GEGFKTV 325 (464)
T ss_pred CCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCC--CCCCccE
Confidence 110 0000 000 0000 01136889999988752 2236799
Q ss_pred cCCceEEEEeeecCCCCCHHHHHHHHHHHhccC-CCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHh
Q 013216 288 QPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA-SRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKA 366 (447)
Q Consensus 288 iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~ 366 (447)
||++|++.+|+|++|.++.+++.++|+++++.. ....+++ +.. ....|++ .++.++++++.+.+++++.
T Consensus 326 vP~~~~~~~diR~~p~~~~~~v~~~i~~~l~~~~~~~~~v~---~~~------~~~~~~~-~~~~~~~~v~~l~~~~~~~ 395 (464)
T PRK09104 326 IPAEASAKVSFRLVGGQDPAKIREAFRAYVRARLPADCSVE---FHD------HGGSPAI-ALPYDSPALAAAKAALSDE 395 (464)
T ss_pred ecCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhCCCCeEEE---EEe------cCCCCce-ECCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999988632 1234444 321 1233443 4677899999999999987
Q ss_pred cCCCCCceecCCCc-chHHHH-HcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013216 367 NGKLGKPEIFPAST-DARYFR-ERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 432 (447)
Q Consensus 367 ~~~~~~~~~~~g~~-D~~~~~-~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~ 432 (447)
.+..+.....+|++ |++.|. ..|+|++.|||+... ..+|++||+++++++.+++++|.+++..++
T Consensus 396 ~~~~~~~~~~~g~~~~~~~~~~~~gip~v~~g~G~~~-~~aH~~nE~i~i~~l~~~~~~~~~ll~~~~ 462 (464)
T PRK09104 396 WGKPAVLIGSGGSIPIVGDFKRILGMDSLLVGFGLDD-DRIHSPNEKYDLESFHKGIRSWARILAALA 462 (464)
T ss_pred hCCCceecCCCCcHHHHHHHHHHhCCCEEEecCCCCC-CCCcCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 65542333333333 355554 469999999987432 369999999999999999999999998875
No 27
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-52 Score=431.70 Aligned_cols=384 Identities=25% Similarity=0.353 Sum_probs=293.9
Q ss_pred CChhHHHHHHHhhhcccCCCCCCCh-------hHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEee
Q 013216 25 KSDDSIIERFRAYLQIDTSQPNPDY-------TNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNS 97 (447)
Q Consensus 25 ~~~~~~~~~l~~l~~ips~s~~~~e-------~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~ 97 (447)
.+.++++++|++|++|||+|+..+. .++++||.++|+.+|+.++..+.. + +|+++.++|.+++.++|+|+|
T Consensus 41 ~~~~~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~~~-~-~~vv~~~~g~~~~~~~ill~g 118 (486)
T PRK08262 41 VDEDAAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREVVG-G-HSLLYTWKGSDPSLKPIVLMA 118 (486)
T ss_pred CCHHHHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEEEC-C-ccEEEEEECCCCCCCeEEEEC
Confidence 4788999999999999999853322 257888888888899988766543 3 588888887655558999999
Q ss_pred ccccCCCCC---CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHH
Q 013216 98 HTDVVPSEP---SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAE 174 (447)
Q Consensus 98 H~Dtvp~~~---~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~ 174 (447)
||||||+++ ..|+++||+++++ ||+|||||++|||++++++|.|++.|++.+..++++|+|+|+++||+|+ .|++
T Consensus 119 H~DvVp~~~~~~~~W~~~Pf~~~~~-dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~-~G~~ 196 (486)
T PRK08262 119 HQDVVPVAPGTEGDWTHPPFSGVIA-DGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGG-LGAR 196 (486)
T ss_pred cccccCCCCCCcccCccCCCceEee-CCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCC-cCHH
Confidence 999999974 5799999999997 9999999999999999999999999999887788999999999999987 5999
Q ss_pred HHHccccccCCceEEEEecCC----------cCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHH
Q 013216 175 KFADSHVFNSLNVGIVLDEGL----------ASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESV 244 (447)
Q Consensus 175 ~~~~~~~~~~~~~~~~~d~g~----------~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l 244 (447)
.+++.....+.+..++++.+. .+|+ ..+..++||..+++|+++|+++|+|.|+..||+..++++|..|
T Consensus 197 ~l~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~p~--~~i~~~~kG~~~~~i~v~G~~~Hss~p~~~nai~~l~~~l~~l 274 (486)
T PRK08262 197 AIAELLKERGVRLAFVLDEGGAITEGVLPGVKKPV--ALIGVAEKGYATLELTARATGGHSSMPPRQTAIGRLARALTRL 274 (486)
T ss_pred HHHHHHHHhcCCEEEEEeCCceecccccCCCCceE--EeeEEeeeeeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 888642211122233333221 1232 2567789999999999999999999986679999999999999
Q ss_pred Hhchhh---------hHHHHHh---------------------------ccccCCCcceeeeeeeecCCCCCCCcccccc
Q 013216 245 RRFRAS---------QFDLVKA---------------------------GLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQ 288 (447)
Q Consensus 245 ~~~~~~---------~~~~~~~---------------------------~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~i 288 (447)
+.+... .++.+.. ........+|++++.|++|. ..|+|
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~------~~NvI 348 (486)
T PRK08262 275 EDNPLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSP------KDNVL 348 (486)
T ss_pred hhCCCCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecCC------ccccC
Confidence 874210 1110100 00001124688999999886 88999
Q ss_pred CCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcC
Q 013216 289 PSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANG 368 (447)
Q Consensus 289 P~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~ 368 (447)
|++|++.+|+|++|.++.+++.++|+++++.. +++++ +.. ....|++ ..+.++++++.+++++++.++
T Consensus 349 P~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~--~~~v~---~~~------~~~~~~~-~~~~~~~lv~~l~~a~~~~~g 416 (486)
T PRK08262 349 PQRATATVNFRILPGDSVESVLAHVRRAVADD--RVEIE---VLG------GNSEPSP-VSSTDSAAYKLLAATIREVFP 416 (486)
T ss_pred CCccEEEEEEEeCCCCCHHHHHHHHHHHhccC--ceEEE---Eec------CCCCCCC-CCCCCCHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999888743 44444 321 1223333 356789999999999999876
Q ss_pred C-CCCceecCCCcchHHHHHcCCCe-----EEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhh
Q 013216 369 K-LGKPEIFPASTDARYFRERGLPA-----IGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASY 434 (447)
Q Consensus 369 ~-~~~~~~~~g~~D~~~~~~~g~p~-----~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~~ 434 (447)
. ...+..+.|+||+++|...+.++ +.|||+.. ...|++||+++++++.+++++|..++..++++
T Consensus 417 ~~~~~~~~~~g~tDa~~~~~~~p~~~~~~~~~~gpg~~--~~~Ht~dE~i~i~~l~~~~~i~~~~l~~~~~~ 486 (486)
T PRK08262 417 DVVVAPYLVVGATDSRHYSGISDNVYRFSPLRLSPEDL--ARFHGTNERISVANYARMIRFYYRLIENAAGL 486 (486)
T ss_pred CCccccceecccccHHHHHHhcCCeEEECCccCCcccc--cCCCCCCCceeHHHHHHHHHHHHHHHHHhhcC
Confidence 3 22334567899999998764333 34555433 26899999999999999999999999988753
No 28
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-52 Score=427.04 Aligned_cols=389 Identities=19% Similarity=0.232 Sum_probs=297.1
Q ss_pred CCCCChhHHHHHHHhhhcccCCCCC----CChhHHHHHHHHHHHHCCC-ceEEEeecCCCCeEEEEecCCCCCCCeEEEe
Q 013216 22 SPAKSDDSIIERFRAYLQIDTSQPN----PDYTNASKFILAQAEALSL-ESQTLEFAKNKPLILLKWPGSNPQLPSILLN 96 (447)
Q Consensus 22 ~~~~~~~~~~~~l~~l~~ips~s~~----~~e~~~~~~i~~~l~~~G~-~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~ 96 (447)
..+.+.++++++|++|++|||+|+. .++.+++++|.++|+++|+ +++.++ .++++|+++.+++.. +.|+|+|+
T Consensus 12 ~i~~~~~~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~~~~nl~a~~~~~~-~~~~lll~ 89 (449)
T PRK07907 12 RVAELLPRVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVS-ADGAPAVIGTRPAPP-GAPTVLLY 89 (449)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEe-cCCCCEEEEEecCCC-CCCEEEEE
Confidence 3456788999999999999999853 2467899999999999998 677665 347889999997643 35899999
Q ss_pred eccccCCCCC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHH
Q 013216 97 SHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEK 175 (447)
Q Consensus 97 ~H~Dtvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~ 175 (447)
||+||||+++ +.|+++||++.++ ||+|||||++|||++++++|.|++.| +.+++++|.|+++++||+|+ .|+++
T Consensus 90 gH~DvVp~~~~~~W~~~Pf~~~~~-~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~-~g~~~ 164 (449)
T PRK07907 90 AHHDVQPPGDPDAWDSPPFELTER-DGRLYGRGAADDKGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGS-PSLER 164 (449)
T ss_pred cccCCCCCCCccccCCCCceeEEE-CCEEEECCccCCcHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCC-ccHHH
Confidence 9999999976 6899999999997 99999999999999999999999998 34567899999999999987 69999
Q ss_pred HHcccc-ccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEe--ecCCccCCC-CCC-CHHHHHHHHHHHHHhchhh
Q 013216 176 FADSHV-FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKAR--GAPGHGAKL-YDN-SAMENLFKSIESVRRFRAS 250 (447)
Q Consensus 176 ~~~~~~-~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~--G~~~Hs~~p-~~g-nai~~~~~~i~~l~~~~~~ 250 (447)
++++.. ..+.|++++.|.+.... +.+.++.++||..+++++++ |+++|+|.| ..+ ||+..+++++.+|.+....
T Consensus 165 ~l~~~~~~~~~d~~iv~E~~~~~~-~~p~i~~~~kG~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~l~~~~~~ 243 (449)
T PRK07907 165 LLAEHPDLLAADVIVIADSGNWSV-GVPALTTSLRGNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLATLHDEDGN 243 (449)
T ss_pred HHHhchHhhcCCEEEEecCCcCCC-CCeEEEEecCCcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHhhCCCCCC
Confidence 988642 22357788887543211 12368899999999999998 889999975 445 9999999999999764210
Q ss_pred ----------hH-----H--HHHh--cc-------------ccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEee
Q 013216 251 ----------QF-----D--LVKA--GL-------------KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDI 298 (447)
Q Consensus 251 ----------~~-----~--~~~~--~~-------------~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~ 298 (447)
.+ + .... +. ......++++++.|++|. ++.+.|+||++|++.+|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~---~g~~~nvIP~~a~~~~di 320 (449)
T PRK07907 244 VAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPP---VAGASNALPPSARARLSL 320 (449)
T ss_pred EeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCC---CCCCCCEecCceEEEEEE
Confidence 00 0 0000 00 000124688888888753 344889999999999999
Q ss_pred ecCCCCCHHHHHHHHHHHhccCCC-CceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecC
Q 013216 299 RVPPTTDAESLERRIVEEWAPASR-NMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFP 377 (447)
Q Consensus 299 R~~~~~~~~~i~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 377 (447)
|+.|.++.+++.+.|+++++.... +.+++ ++. .....|. .++.++|+++.+.+++++..+..+.....+
T Consensus 321 R~~p~~~~e~v~~~l~~~l~~~~~~~~~~~---~~~-----~~~~~p~--~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~ 390 (449)
T PRK07907 321 RVAPGQDAAEAQDALVAHLEAHAPWGAHVT---VER-----GDAGQPF--AADASGPAYDAARAAMREAWGKDPVDMGMG 390 (449)
T ss_pred EcCCCCCHHHHHHHHHHHHHhcCCCCcEEE---EEE-----CCCcCce--eCCCCCHHHHHHHHHHHHHhCCCceecCCC
Confidence 999999999999999988874322 34444 331 0133444 356689999999999999866542333334
Q ss_pred CCcc-hHHHHH-c-CCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013216 378 ASTD-ARYFRE-R-GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 432 (447)
Q Consensus 378 g~~D-~~~~~~-~-g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~ 432 (447)
|+++ ...|.+ . ++|++.|||+... .++|++||+++++++.+++++|+.++..+.
T Consensus 391 g~~~~~~~~~~~~~~~~~v~~Gpg~~~-~~aH~~nE~i~i~~l~~~~~~~~~~l~~~~ 447 (449)
T PRK07907 391 GSIPFIAELQEAFPQAEILVTGVEDPK-TRAHSPNESVHLGELERAAVAEALLLARLA 447 (449)
T ss_pred CcHHHHHHHHHhcCCCcEEEeccCCCC-CCCcCCCCCcCHHHHHHHHHHHHHHHHHHh
Confidence 4433 233433 3 4789999998632 268999999999999999999999999884
No 29
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.6e-52 Score=412.35 Aligned_cols=353 Identities=20% Similarity=0.238 Sum_probs=273.8
Q ss_pred hhHHHHHHHhhhcccCCCCC--CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCC
Q 013216 27 DDSIIERFRAYLQIDTSQPN--PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS 104 (447)
Q Consensus 27 ~~~~~~~l~~l~~ips~s~~--~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~ 104 (447)
.++++++|++|++|||.++. .++.++++++.++|+ |++++.++...+++|+++.. | .|+|+|+||+||||+
T Consensus 5 ~~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~~-g----~~~lll~gH~DtVp~ 77 (364)
T PRK08737 5 LESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAVR-G----TPKYLFNVHLDTVPD 77 (364)
T ss_pred HHHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEEc-C----CCeEEEEeeeCCCCC
Confidence 45789999999999998753 347899999999996 99888766555778999863 3 278999999999999
Q ss_pred CCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccC
Q 013216 105 EPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNS 184 (447)
Q Consensus 105 ~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~ 184 (447)
++ .|+++||.+.++ ||+|||||++|||++++++|.|++. +.++|.|+|++|||.|+..|++.+++.+. +
T Consensus 78 ~~-~w~~~Pf~~~~~-~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~ 146 (364)
T PRK08737 78 SP-HWSADPHVMRRT-DDRVIGLGVCDIKGAAAALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAFLARGI--P 146 (364)
T ss_pred CC-CCCCCCCceEEE-CCEEEEECcccchHHHHHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHHHHhCC--C
Confidence 74 799999999997 9999999999999999999999863 35799999999999986469888888653 3
Q ss_pred CceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCC-CCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccC
Q 013216 185 LNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKL-YDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAE 262 (447)
Q Consensus 185 ~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p-~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 262 (447)
.+++++. +|+. ..++.++||..+++|+++|+++|+|.| +.| |||..+++++.++.++.... ..... ..
T Consensus 147 ~~~~iv~-----Ept~-~~~~~~~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~---~~~~~-~~ 216 (364)
T PRK08737 147 YEAVLVA-----EPTM-SEAVLAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESL---AHARF-GG 216 (364)
T ss_pred CCEEEEc-----CCCC-ceeEEecceeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhh---hhhcc-CC
Confidence 4666654 6775 678999999999999999999999998 478 99999999988765432111 00000 01
Q ss_pred CCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCC
Q 013216 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFG 342 (447)
Q Consensus 263 ~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (447)
...++++++.+++|. +.|+||++|++.+|+|+.|.++.+++.++|+++++.. .+.++ +... ...
T Consensus 217 ~~~~t~~vg~i~GG~------~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~~~~--~~~~~---~~~~-----~~~ 280 (364)
T PRK08737 217 LTGLRFNIGRVEGGI------KANMIAPAAELRFGFRPLPSMDVDGLLATFAGFAEPA--AATFE---ETFR-----GPS 280 (364)
T ss_pred CCCCceEEeeEecCC------CCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHHHHc--CCceE---EEec-----cCC
Confidence 123589999999987 8999999999999999999999999999997776532 23333 2100 111
Q ss_pred CCcccccCCCChHHHHH-HHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHH
Q 013216 343 RPILTATDSSNPWWNLL-EEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGI 421 (447)
Q Consensus 343 ~p~~~~~~~~~~~~~~~-~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~ 421 (447)
.|.. ..+. .+++..+ +++.+..+... ....+++||+++|...|+|++.|||+... ++|++||+++++++.+++
T Consensus 281 ~~~~-~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~tDa~~~~~~Gip~v~~GpG~~~--~aHt~dE~i~i~~l~~~~ 354 (364)
T PRK08737 281 LPSG-DIAR-AEERRLAARDVADALDLPI--GNAVDFWTEASLFSAAGYTALVYGPGDIA--QAHTADEFVTLDQLQRYA 354 (364)
T ss_pred CCCc-ccCc-chHHHHHHHHHHhhhcCCC--CceeccccCHHHHHHcCCCEEEECCCChh--hccCCCcceeHHHHHHHH
Confidence 2222 1222 3566544 44555444332 22346789999999999999999998653 699999999999999999
Q ss_pred HHHHHHHH
Q 013216 422 DIYESIIK 429 (447)
Q Consensus 422 ~~~~~~l~ 429 (447)
++|.+++.
T Consensus 355 ~~~~~~~~ 362 (364)
T PRK08737 355 ESVHRIIN 362 (364)
T ss_pred HHHHHHhc
Confidence 99999875
No 30
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=5.9e-52 Score=408.68 Aligned_cols=339 Identities=22% Similarity=0.234 Sum_probs=280.3
Q ss_pred CCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCC
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVP 103 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp 103 (447)
++..++++++|++|++|||.| ++|.++++||.++|+++|++++..+. .|++. .| .++|+|+||+||||
T Consensus 6 ~~~~~~~~~~l~~lv~i~s~s--~~e~~~~~~l~~~l~~~g~~~~~~~~----~~~~~--~g----~~~lll~gH~DtVp 73 (346)
T PRK00466 6 ELVKQKAKELLLDLLSIYTPS--GNETNATKFFEKISNELNLKLEILPD----SNSFI--LG----EGDILLASHVDTVP 73 (346)
T ss_pred HHHHHHHHHHHHHHhcCCCCC--CCHHHHHHHHHHHHHHcCCeEEEecC----CCcEe--cC----CCeEEEEeccccCC
Confidence 344578899999999999974 78999999999999999998876542 25553 33 26799999999998
Q ss_pred CCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHcccccc
Q 013216 104 SEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFN 183 (447)
Q Consensus 104 ~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~ 183 (447)
. +|.+.++ ||+|||||++|||++++++|.|++.|.+.+ .++.|+|++|||+|+ .|++.+++++.
T Consensus 74 ~--------~~~~~~~-~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~-~G~~~l~~~~~-- 137 (346)
T PRK00466 74 G--------YIEPKIE-GEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEESTS-IGAKELVSKGF-- 137 (346)
T ss_pred C--------CCCceee-CCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcccCC-ccHHHHHhcCC--
Confidence 4 2566786 999999999999999999999999998875 358999999999876 69999998753
Q ss_pred CCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhHHHHHhccccCC
Q 013216 184 SLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEG 263 (447)
Q Consensus 184 ~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 263 (447)
..|.+++. +|+....+++++||..+++|+++|+++|+|.|+. ||+..+++++..|.++... .
T Consensus 138 ~~d~~i~~-----ep~~~~~i~~~~kG~~~~~i~v~G~~~Has~p~~-nAi~~~~~~l~~l~~~~~~------------~ 199 (346)
T PRK00466 138 NFKHIIVG-----EPSNGTDIVVEYRGSIQLDIMCEGTPEHSSSAKS-NLIVDISKKIIEVYKQPEN------------Y 199 (346)
T ss_pred CCCEEEEc-----CCCCCCceEEEeeEEEEEEEEEEeeccccCCCCc-CHHHHHHHHHHHHHhcccc------------C
Confidence 35766664 5665457899999999999999999999998865 9999999999988654211 1
Q ss_pred CcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCC
Q 013216 264 EVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGR 343 (447)
Q Consensus 264 ~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (447)
..++++++.+++|. ..|+||++|++.+|+|+.|+++.+++.++|++.+.. ++++ +. ...
T Consensus 200 ~~~t~~~~~i~gG~------~~NvvP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~----~~~~---~~--------~~~ 258 (346)
T PRK00466 200 DKPSIVPTIIRAGE------SYNVTPAKLYLHFDVRYAINNKRDDLISEIKDKFQE----CGLK---IV--------DET 258 (346)
T ss_pred CCCcceeeEEecCC------cCcccCCceEEEEEEEeCCCCCHHHHHHHHHHHHhh----CcEe---ec--------cCC
Confidence 12578899999886 899999999999999999999999999999888863 3343 22 233
Q ss_pred CcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHH
Q 013216 344 PILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDI 423 (447)
Q Consensus 344 p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~ 423 (447)
|++ ..+.++|+++.+.+++++.+.++ .+...+|++|+++|.+.++|++.|||+... .+|++|||++++++.+++++
T Consensus 259 ~~~-~~~~~~~lv~~l~~a~~~~g~~~-~~~~~~g~tD~~~~~~~~~~~v~fGpg~~~--~aH~~nE~i~i~~l~~~~~~ 334 (346)
T PRK00466 259 PPV-KVSINNPVVKALMRALLKQNIKP-RLVRKAGTSDMNILQKITTSIATYGPGNSM--LEHTNQEKITLDEIYIAVKT 334 (346)
T ss_pred CCc-ccCCCCHHHHHHHHHHHHhCCCc-eEEecCCcCcHHHHHHhCCCEEEECCCCcc--cccCCCceeeHHHHHHHHHH
Confidence 333 45677999999999999976543 555667899999999988899999998654 69999999999999999999
Q ss_pred HHHHHHHHHh
Q 013216 424 YESIIKAYAS 433 (447)
Q Consensus 424 ~~~~l~~l~~ 433 (447)
|..++..++.
T Consensus 335 ~~~~i~~l~~ 344 (346)
T PRK00466 335 YMLAIEELWQ 344 (346)
T ss_pred HHHHHHHHHh
Confidence 9999998864
No 31
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-51 Score=421.16 Aligned_cols=388 Identities=18% Similarity=0.200 Sum_probs=293.7
Q ss_pred hhHHHHHHHhhhcccCCCCC-CChhHHHHHHH----HHHHHCCCceEEEeec--CCCCeEEEEecCCCCCCCeEEEeecc
Q 013216 27 DDSIIERFRAYLQIDTSQPN-PDYTNASKFIL----AQAEALSLESQTLEFA--KNKPLILLKWPGSNPQLPSILLNSHT 99 (447)
Q Consensus 27 ~~~~~~~l~~l~~ips~s~~-~~e~~~~~~i~----~~l~~~G~~~~~~~~~--~~~~nl~~~~~g~~~~~~~ill~~H~ 99 (447)
.++++++|++|++|||+|+. .++.++++++. ++|+++|++++.++.. .+++||++.+.+.+ ..|+|+|+||+
T Consensus 16 ~~~~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~~~~~-~~~~lll~gH~ 94 (469)
T PRK07079 16 SGAFFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIAERIEDD-ALPTVLIYGHG 94 (469)
T ss_pred cHHHHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEEEeCCCC-CCCEEEEEccc
Confidence 35899999999999999853 34557777764 5899999999876643 36789999986543 35899999999
Q ss_pred ccCCCCCCCCC--cCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHc-CCCCceeEEEEeecCcccCcccCHHHH
Q 013216 100 DVVPSEPSKWS--HHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS-GFQPVRSVYLSFVPDEEIGGHDGAEKF 176 (447)
Q Consensus 100 Dtvp~~~~~W~--~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~-~~~~~~~i~~~~~~~EE~g~~~G~~~~ 176 (447)
||||++++.|+ ++||+++++ ||+|||||++|||++++++|.|++.|.+. +.++.++|.|++++|||+|+ .|++.+
T Consensus 95 DvVp~~~~~W~~~~~Pf~~~~~-dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~~dEE~g~-~G~~~l 172 (469)
T PRK07079 95 DVVRGYDEQWREGLSPWTLTEE-GDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVKLLIEMGEEIGS-PGLAEV 172 (469)
T ss_pred CCCCCChHHhcccCCCCccccc-CCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCC-ccHHHH
Confidence 99998777899 599999997 99999999999999999999999998764 46788999999999999987 699999
Q ss_pred Hcccc-ccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeec--CCccCCCCCC---CHHHHHHHHHHHHHhchhh
Q 013216 177 ADSHV-FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGA--PGHGAKLYDN---SAMENLFKSIESVRRFRAS 250 (447)
Q Consensus 177 ~~~~~-~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~--~~Hs~~p~~g---nai~~~~~~i~~l~~~~~~ 250 (447)
+++.. ....|++++.+.+...++. +.+++++||..+++|+++|+ +.||+ ++.| ||+..++.+|..+.+....
T Consensus 173 ~~~~~~~~~~d~~iv~e~~~~~~~~-~~i~~g~kG~~~~~v~v~G~~~~~hs~-~~~g~~~nai~~l~~ai~~l~~~~~~ 250 (469)
T PRK07079 173 CRQHREALAADVLIASDGPRLSAER-PTLFLGSRGAVNFRLRVNLRDGAHHSG-NWGGLLRNPGTVLAHAIASLVDARGR 250 (469)
T ss_pred HHHhHHhcCCCEEEEeCCCccCCCC-eEEEEecceEEEEEEEEeeCCCCCCCC-ccccccCCHHHHHHHHHHHhCCCCCC
Confidence 98753 1235788887654333333 56899999999999999997 44665 4443 9999999999988542100
Q ss_pred --------------hHHHHHhccc----------------------cCCCcceeeeeeeecCCCCCCCccccccCCceEE
Q 013216 251 --------------QFDLVKAGLK----------------------AEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEA 294 (447)
Q Consensus 251 --------------~~~~~~~~~~----------------------~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~ 294 (447)
....+..... ..-..+|++++.|++|.. ....|+||++|++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~---~~~~NvVP~~a~~ 327 (469)
T PRK07079 251 IQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKTGNP---DAPVNAIPGSARA 327 (469)
T ss_pred EecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEeeecCCC---CCcceEecCceEE
Confidence 0000000000 001125789999998842 1258999999999
Q ss_pred EEeeecCCCCCHHHHHHHHHHHhccCC-CCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCc
Q 013216 295 GFDIRVPPTTDAESLERRIVEEWAPAS-RNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKP 373 (447)
Q Consensus 295 ~~d~R~~~~~~~~~i~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 373 (447)
.+|+|++|+++.+++.++|+++++... ..++++ +. ....|. .++.++|+++.+.+++++.++..+..
T Consensus 328 ~vdiR~~P~~~~e~v~~~l~~~i~~~~~~~v~~~---~~-------~~~~p~--~~~~~~~~v~~l~~a~~~~~g~~~~~ 395 (469)
T PRK07079 328 VCQLRFVVGTDWENLAPHLRAHLDAHGFPMVEVT---VE-------RGSPAT--RLDPDDPWVRWALASIARTTGKKPAL 395 (469)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHhcCCCCeEEE---Ee-------CCCCce--ecCCCCHHHHHHHHHHHHHhCCCCce
Confidence 999999999999999999999987432 233444 22 223333 36778999999999999886543222
Q ss_pred e-ecCCCcchHHHHH-cCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhhc
Q 013216 374 E-IFPASTDARYFRE-RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASYV 435 (447)
Q Consensus 374 ~-~~~g~~D~~~~~~-~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~~~ 435 (447)
. ..+|++|+++|.. .|+|++.||++..+ ...|++||+++++++.+++++|..++..+++..
T Consensus 396 ~~~~~g~~d~~~~~~~~giP~v~~g~~~~~-~~~H~~dE~v~l~~l~~~~~~~~~~~~~~~~~~ 458 (469)
T PRK07079 396 LPNLGGSLPNDVFADILGLPTLWVPHSYPA-CSQHAPNEHLLASVAREGLQIMAGLFWDLGEQG 458 (469)
T ss_pred ecCCCcchhHHHHHHHhCCCEEEecCCCCC-ccCcCCCCCCCHHHHHHHHHHHHHHHHHHhccC
Confidence 2 2346678888875 69999977554322 257999999999999999999999999997543
No 32
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.4e-51 Score=405.05 Aligned_cols=344 Identities=20% Similarity=0.247 Sum_probs=282.0
Q ss_pred hHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCCCC
Q 013216 28 DSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEPS 107 (447)
Q Consensus 28 ~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~~ 107 (447)
+++++++++|++|||.| ++|.++++||.++|+++|++++.... .+.+|+++ + +.|+|+|+|||||||...
T Consensus 2 ~~~~~~~~~lv~ips~s--~~e~~~~~~l~~~l~~~G~~v~~~~~-~~~~~~~~---~---~~~~i~l~~H~D~vp~~~- 71 (347)
T PRK08652 2 ERAKELLKQLVKIPSPS--GQEDEIALHIMEFLESLGYDVHIESD-GEVINIVV---N---SKAELFVEVHYDTVPVRA- 71 (347)
T ss_pred hhHHHHHHHHhcCCCCC--CchHHHHHHHHHHHHHcCCEEEEEec-CceeEEEc---C---CCCEEEEEccccccCCCC-
Confidence 67899999999999986 78899999999999999999876443 23567776 2 238999999999999752
Q ss_pred CCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCce
Q 013216 108 KWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNV 187 (447)
Q Consensus 108 ~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~ 187 (447)
+| .++ ||++||||++|||++++++|.|++.|.+.. ++++|.|+|++|||.|+ .|++.++++. . .|+
T Consensus 72 ----~~---~~~-~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~v~~~~~~dEE~g~-~G~~~~~~~~--~-~d~ 137 (347)
T PRK08652 72 ----EF---FVD-GVYVYGTGACDAKGGVAAILLALEELGKEF--EDLNVGIAFVSDEEEGG-RGSALFAERY--R-PKM 137 (347)
T ss_pred ----CC---EEE-CCEEEeccchhhhHHHHHHHHHHHHHhhcc--cCCCEEEEEecCcccCC-hhHHHHHHhc--C-CCE
Confidence 23 365 999999999999999999999999998653 45799999999999986 6999998753 2 367
Q ss_pred EEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcc
Q 013216 188 GIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVV 266 (447)
Q Consensus 188 ~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 266 (447)
+++.+ |+. ..+.++++|..+++|+++|+++|++.|+.| ||+..+++++..|+.+..... .. . .+
T Consensus 138 ~i~~e-----p~~-~~i~~~~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~----~~---~--~~ 202 (347)
T PRK08652 138 AIVLE-----PTD-LKVAIAHYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALG----KY---F--DP 202 (347)
T ss_pred EEEec-----CCC-CceeeecccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhh----cc---c--CC
Confidence 77774 543 468899999999999999999999999998 999999999999977543210 00 1 13
Q ss_pred eeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCcc
Q 013216 267 SVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPIL 346 (447)
Q Consensus 267 t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 346 (447)
+++++.+++|. ..|+||++|++.+|+|++|.++.+++.++|+++++. .+++++ +. ... |.+
T Consensus 203 ~~~~~~i~gg~------~~nviP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~--~~v~~~---~~-------~~~-~~~ 263 (347)
T PRK08652 203 HIGIQEIIGGS------PEYSIPALCRLRLDARIPPEVEVEDVLDEIDPILDE--YTVKYE---YT-------EIW-DGF 263 (347)
T ss_pred CCcceeeecCC------CCCccCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHh--cCceEE---Ee-------ccC-Ccc
Confidence 56666788776 889999999999999999999999999999988853 345555 32 122 333
Q ss_pred cccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHH
Q 013216 347 TATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYES 426 (447)
Q Consensus 347 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~ 426 (447)
..+.++++++.+.+++++.+..+ .+..++|++|+++|...|+|++.|||+... ..|++|||++++++.+++++|.+
T Consensus 264 -~~~~~~~lv~~l~~a~~~~g~~~-~~~~~~g~tDa~~~~~~gip~v~~Gpg~~~--~~H~~nE~i~i~~l~~~~~~l~~ 339 (347)
T PRK08652 264 -ELDEDEEIVQLLEKAMKEVGLEP-EFTVMRSWTDAINFRYNGTKTVVWGPGELD--LCHTKFERIDVREVEKAKEFLKA 339 (347)
T ss_pred -cCCCCCHHHHHHHHHHHHhCCCC-CcCcCCccchhHHHHHCCCCEEEECCCchh--hcCCCCceeeHHHHHHHHHHHHH
Confidence 35678999999999999995443 566678899999999999999999998653 69999999999999999999999
Q ss_pred HHHHHHh
Q 013216 427 IIKAYAS 433 (447)
Q Consensus 427 ~l~~l~~ 433 (447)
++..++.
T Consensus 340 ~~~~~~~ 346 (347)
T PRK08652 340 LNEILLE 346 (347)
T ss_pred HHHHHhc
Confidence 9988753
No 33
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-50 Score=407.09 Aligned_cols=382 Identities=24% Similarity=0.408 Sum_probs=299.8
Q ss_pred CChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCC--CCeEEEEecCCCCCCCeEEEeeccccC
Q 013216 25 KSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKN--KPLILLKWPGSNPQLPSILLNSHTDVV 102 (447)
Q Consensus 25 ~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~--~~nl~~~~~g~~~~~~~ill~~H~Dtv 102 (447)
...++++++|++|++|||+| ...+.++++++.++|+++|+.++....... .+|+++.+.+..+. |+|+|+||+|||
T Consensus 10 ~~~~~~~~~l~~lv~~~s~s-~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~-~~l~l~~H~DvV 87 (409)
T COG0624 10 DLLDDILELLKELVRIPSVS-AGEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGG-PTLLLGGHLDVV 87 (409)
T ss_pred HhhHHHHHHHHHHhcCCCCC-cccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCC-CeEEEecccccc
Confidence 35678889999999999997 578889999999999999999887665432 57999999765433 899999999999
Q ss_pred CCCC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHcccc
Q 013216 103 PSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHV 181 (447)
Q Consensus 103 p~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~ 181 (447)
|+++ ..|+++||.++++ +|+|||||++||||++++++.|++.+.+.+..++++|.+++++|||+|+ .|+..++.++.
T Consensus 88 P~g~~~~W~~~Pf~~~~~-dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~-~~~~~~~~~~~ 165 (409)
T COG0624 88 PAGGGEDWTTDPFEPTIK-DGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGG-AGGKAYLEEGE 165 (409)
T ss_pred CCCCcccCccCCCccEEE-CCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCC-cchHHHHHhcc
Confidence 9998 8999999999997 8999999999999999999999999999877788999999999999998 68887777653
Q ss_pred c---cCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCC--CCCC-CHHHHHHHHHHHH----Hhchhhh
Q 013216 182 F---NSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAK--LYDN-SAMENLFKSIESV----RRFRASQ 251 (447)
Q Consensus 182 ~---~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~--p~~g-nai~~~~~~i~~l----~~~~~~~ 251 (447)
. ...|+.++.+... .......++.++||..+++|+++|+++|+|. |+.+ |++..+...+..+ .++....
T Consensus 166 ~~~~~~~d~~i~~E~~~-~~~~~~~~~~~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~ 244 (409)
T COG0624 166 EALGIRPDYEIVGEPTL-ESEGGDIIVVGHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLAGEG 244 (409)
T ss_pred hhhccCCCEEEeCCCCC-cccCCCeEEEcceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhccccccc
Confidence 2 3457777776411 1123356777999999999999999999998 7777 9554444444443 3222111
Q ss_pred HHHHHhccccCCCcceeeeeeeecCCC--CCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCC--CCceEe
Q 013216 252 FDLVKAGLKAEGEVVSVNMAFLKAGTP--SPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPAS--RNMTFE 327 (447)
Q Consensus 252 ~~~~~~~~~~~~~~~t~~~~~i~~g~~--~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~--~~~~~~ 327 (447)
+ ....+++++.+.++.. ..++...|+||++|++.+|+|+.|.++.+++.++|++.++... .+++++
T Consensus 245 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~~~~~~~~ 314 (409)
T COG0624 245 F----------DGPLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAPKEGVEYE 314 (409)
T ss_pred c----------cCCccccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHHHHHHhccccCceEE
Confidence 0 0024666666665553 2445567999999999999999999999998888888776432 244555
Q ss_pred eccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCC
Q 013216 328 LGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHD 407 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~ 407 (447)
+.. ....++. .++.++++++.+.+++++..+........++++|+.|++..++|++.|||+..+ .+|+
T Consensus 315 ---~~~------~~~~~~~-~~~~~~~~v~~l~~~~~~~~g~~~~~~~~G~~~da~~~~~~~~~~~~fgp~~~~--~~H~ 382 (409)
T COG0624 315 ---IEP------GLGEPPL-PVPGDSPLVAALAEAAEELLGLPPEVSTGGGTHDARFFARLGIPAVIFGPGDIG--LAHQ 382 (409)
T ss_pred ---ecc------ccCCccc-cCCCchHHHHHHHHHHHHhhCCCceecCCCCcchHHHHHhcCCeeEEECCCCcc--cccC
Confidence 321 1223332 567789999999999999754432333444568999999999899999999854 7999
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 408 HNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 408 ~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
+|||++++++.+++++|..+++.+++
T Consensus 383 ~~E~v~i~~l~~~~~~~~~~l~~l~~ 408 (409)
T COG0624 383 PNEYVELEDLVKGAKVLARLLYELAE 408 (409)
T ss_pred CCceeeHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999874
No 34
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=3.2e-50 Score=396.46 Aligned_cols=342 Identities=19% Similarity=0.218 Sum_probs=273.7
Q ss_pred hhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCCC
Q 013216 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP 106 (447)
Q Consensus 27 ~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~ 106 (447)
.++++++|++|++|||++ ++|.++++|+.++|+++|++++..+ ..|+++++ |. +.|+|+|+||+||||..
T Consensus 5 ~~~~~~~l~~Lv~i~s~s--~~e~~~~~~l~~~l~~~G~~~~~~~----~~n~i~~~-~~--~~~~l~~~~H~DtVp~~- 74 (348)
T PRK04443 5 ALEARELLKGLVEIPSPS--GEEAAAAEFLVEFMESHGREAWVDE----AGNARGPA-GD--GPPLVLLLGHIDTVPGD- 74 (348)
T ss_pred hHHHHHHHHHHHcCCCCC--CChHHHHHHHHHHHHHcCCEEEEcC----CCcEEEEc-CC--CCCEEEEEeeccccCCC-
Confidence 467999999999999985 7889999999999999999887432 34899987 33 24899999999999953
Q ss_pred CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCc
Q 013216 107 SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLN 186 (447)
Q Consensus 107 ~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~ 186 (447)
.|| +++ ||++||||++|||+++++++.|++.| +.+++++|.|+++++||+|+. |...++.+. + ..|
T Consensus 75 -----~p~--~~~-~g~iyGrG~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE~g~~-~~~~~l~~~-~-~~d 140 (348)
T PRK04443 75 -----IPV--RVE-DGVLWGRGSVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEEAPSS-GGARLVADR-E-RPD 140 (348)
T ss_pred -----CCc--Eee-CCeEEeecccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccccCCh-hHHHHHHhc-c-CCC
Confidence 365 466 99999999999999999999999998 346789999999999999874 555555543 2 357
Q ss_pred eEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCc
Q 013216 187 VGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEV 265 (447)
Q Consensus 187 ~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 265 (447)
++++. +|++...++.++||..+++|+++|+++|||.| + ||+..+++++..|..+... ..........
T Consensus 141 ~~iv~-----Ept~~~~i~~~~kG~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~-----~~~~~~~~~~ 208 (348)
T PRK04443 141 AVIIG-----EPSGWDGITLGYKGRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEA-----NDGRERVFDQ 208 (348)
T ss_pred EEEEe-----CCCCccceeeecccEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhc-----Cccccccccc
Confidence 77776 46553468899999999999999999999977 5 9999999999998765320 0000001123
Q ss_pred ceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCc
Q 013216 266 VSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPI 345 (447)
Q Consensus 266 ~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 345 (447)
++++++.+.. ..|+||++|++.+|+|+.|.++.++++++|++.+. .++++ +. .. .|+
T Consensus 209 ~~~~i~~i~~--------~~n~iP~~~~~~~d~R~~p~~~~~~i~~~i~~~~~----~~~~~---~~-------~~-~~~ 265 (348)
T PRK04443 209 VTPKLVDFDS--------SSDGLTVEAEMTVGLRLPPGLSPEEAREILDALLP----TGTVT---FT-------GA-VPA 265 (348)
T ss_pred cceeeeEEec--------CCCCCCceEEEEEEEccCCCCCHHHHHHHHHHhCC----CcEEE---Ee-------cC-CCc
Confidence 5677777772 56999999999999999999999999999988874 23344 32 22 333
Q ss_pred ccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHH-cCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHH
Q 013216 346 LTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRE-RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIY 424 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~-~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~ 424 (447)
+ .++.++|+++.+.+++++.++.+ .....+|++|+++|.+ .|+|++.|||+... .+|++|||++++++.+++++|
T Consensus 266 ~-~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~g~tD~~~~~~~~gip~v~~Gpg~~~--~~H~~dE~i~i~~l~~~~~~~ 341 (348)
T PRK04443 266 Y-MVSKRTPLARAFRVAIREAGGTP-RLKRKTGTSDMNVVAPAWGCPMVAYGPGDSD--LDHTPDEHLPLAEYLRAIAVL 341 (348)
T ss_pred e-ecCCCCHHHHHHHHHHHHhcCCc-ceeccccCCcHHHHhhhcCCCEEEECCCCcc--ccCCCcccccHHHHHHHHHHH
Confidence 3 35678999999999999987754 4445679999999986 59999999998653 689999999999999999999
Q ss_pred HHHHHHH
Q 013216 425 ESIIKAY 431 (447)
Q Consensus 425 ~~~l~~l 431 (447)
..++..|
T Consensus 342 ~~~~~~l 348 (348)
T PRK04443 342 TDVLERL 348 (348)
T ss_pred HHHHhhC
Confidence 9998754
No 35
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=6.2e-50 Score=407.63 Aligned_cols=369 Identities=20% Similarity=0.293 Sum_probs=280.9
Q ss_pred CCChhHHHHHHHhhhcccCCCCC----------CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeE
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPN----------PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSI 93 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~----------~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i 93 (447)
+++.++++++|++|++|||+++. .++.++++++.++|+++||+++.++ |+++.+.+. ++.++|
T Consensus 9 ~~~~~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~~~------~~~~~~~~~-~~~~~l 81 (466)
T TIGR01886 9 EARKDALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGFTTKNFD------NYAGHVEYG-AGDERL 81 (466)
T ss_pred HHhHHHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCCeEEEec------CCceeEEec-CCCCEE
Confidence 45678999999999999999742 3467788899999999999988654 233333222 234899
Q ss_pred EEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCH
Q 013216 94 LLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGA 173 (447)
Q Consensus 94 ll~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~ 173 (447)
+|+|||||||++ +.|+++||+++++ ||+|||||++|||++++++|.|+++|++.+.+++++|.|+++++||+|+ .|+
T Consensus 82 ~~~gH~DvVp~~-~~W~~~Pf~~~~~-dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-~g~ 158 (466)
T TIGR01886 82 GIIGHMDVVPAG-EGWTRDPFEPEID-EGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGW-VDM 158 (466)
T ss_pred EEEeecccCCCC-CCCcCCCCCeEEE-CCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCc-ccH
Confidence 999999999997 5799999999997 9999999999999999999999999999998889999999999999986 699
Q ss_pred HHHHccccccCCceEEEEecCCc----CcCCcce---------------------------------eE-----------
Q 013216 174 EKFADSHVFNSLNVGIVLDEGLA----STTEDYR---------------------------------AF----------- 205 (447)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~d~g~~----~p~~~~~---------------------------------i~----------- 205 (447)
+++++++.. .|++++.|.+.. +++. .. ++
T Consensus 159 ~~~~~~~~~--~d~~~~~d~~~~~~~ge~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~~ 235 (466)
T TIGR01886 159 DYYFKHEET--PDFGFSPDAEFPIINGEKGN-FTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEALKAA 235 (466)
T ss_pred HHHHhcCcC--CCEEEECCCCceeEEEecce-EEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHHHHH
Confidence 999986542 355544332100 1111 00 11
Q ss_pred ----eeeeeeE---------EEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhch--hhhHHHHHh---------c--
Q 013216 206 ----YAERCPW---------WLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFR--ASQFDLVKA---------G-- 258 (447)
Q Consensus 206 ----~~~~G~~---------~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~--~~~~~~~~~---------~-- 258 (447)
.+++|.. +++|+++|+++|+|.|+.| |||..|++++..+..-. ...++.+.. .
T Consensus 236 ~~~~~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 315 (466)
T TIGR01886 236 YESFLADKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGEKLG 315 (466)
T ss_pred HHHHHhhccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcccCC
Confidence 1244433 7889999999999999999 99999999887631100 000011100 0
Q ss_pred ---cccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccc
Q 013216 259 ---LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRA 335 (447)
Q Consensus 259 ---~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~ 335 (447)
.......+|++++.|++|. . | ++|++.+|+|++|.++.+++.++|++.+.. .++++ +..
T Consensus 316 ~~~~~~~~g~~S~nvgvI~gG~------~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~~---~~~v~---~~~-- 377 (466)
T TIGR01886 316 IAFHDELMGDLAMNAGMFDFDH------A-N---KESKLLLNFRYPQGTSPETMQKQVLDKFGG---IVDVT---YNG-- 377 (466)
T ss_pred CcccccCcCceEEEeEEEEEec------C-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHhc---ccEEE---Eec--
Confidence 0011224689999999884 3 3 799999999999999999999999888863 23344 210
Q ss_pred cccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHH
Q 013216 336 SLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQA 415 (447)
Q Consensus 336 ~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~ 415 (447)
....|.+ ++.++++++.+.+++++..+..+.+..++|+||+++|.. ++|...|||+... ++|++|||++++
T Consensus 378 ----~~~~P~~--~~~ds~lv~~l~~a~~~v~G~~~~~~~~~ggTDa~~~~~-~i~~gv~gPG~~~--~aH~~dE~V~i~ 448 (466)
T TIGR01886 378 ----HFEEPHY--VPGSDPLVQTLLKVYEKHTGKKGHEVIIGGGTYGRLLER-GVAYGAMFEGGPD--VMHQANEFMMLD 448 (466)
T ss_pred ----ccCCCcc--cCCCCHHHHHHHHHHHHHhCCCCceeeecCccHHHhccc-ccccccccCCCCC--CccCCCcceEHH
Confidence 1234554 456789999999999998665545566789999999984 6888888898654 689999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 013216 416 EYLKGIDIYESIIKAYA 432 (447)
Q Consensus 416 ~l~~~~~~~~~~l~~l~ 432 (447)
++.+++++|..++..++
T Consensus 449 el~~a~~iy~~~i~~l~ 465 (466)
T TIGR01886 449 DLILAAAIYAEAIYELA 465 (466)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999999885
No 36
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=1.9e-49 Score=393.94 Aligned_cols=343 Identities=19% Similarity=0.203 Sum_probs=263.4
Q ss_pred HHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCCC---CCC
Q 013216 33 RFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP---SKW 109 (447)
Q Consensus 33 ~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~---~~W 109 (447)
+|++|++|||+| ++|.+++++|.++|+++|+.-..++.. ..||++++.+. + .++|+|+|||||||+++ ..|
T Consensus 1 ll~~Lv~ipS~s--~~e~~~~~~i~~~l~~~g~~~~~~~~~--~~nvva~~~~~-~-~~~l~l~gH~DtVp~~~~~~~~W 74 (373)
T TIGR01900 1 LLQQIMDIFSPS--DHEGPIADEIEAALNNLELEGLEVFRF--GDNVLARTDFG-K-ASRVILAGHIDTVPIADNFPPKW 74 (373)
T ss_pred ChHHHhCCCCCC--chHHHHHHHHHHHHhhccccCceEEEE--CCEEEEecCCC-C-CCeEEEeCccccccCCCCChhhh
Confidence 478999999986 789999999999999997542112222 23999997432 2 47899999999999974 469
Q ss_pred CcCCC--------ceeeCCCCcEEecCcccchhHHHHHHHHHHHHHH--cCCCCceeEEEEeecCcccCc-ccCHHHHHc
Q 013216 110 SHHPF--------GAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKA--SGFQPVRSVYLSFVPDEEIGG-HDGAEKFAD 178 (447)
Q Consensus 110 ~~~Pf--------~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~--~~~~~~~~i~~~~~~~EE~g~-~~G~~~~~~ 178 (447)
+++|| .+.++ ||+|||||++|||++++++|.|++.|.+ .+..++++|.|+|+++||+++ ..|++.+++
T Consensus 75 ~~~p~~~~~~~~~~~~~~-~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~ 153 (373)
T TIGR01900 75 LEPGDSLIREEIAHAHPE-DGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRD 153 (373)
T ss_pred ccCccccccccccccccc-CCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHH
Confidence 98775 46786 9999999999999999999999999964 345678999999999999863 249999987
Q ss_pred ccc-ccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHH
Q 013216 179 SHV-FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVK 256 (447)
Q Consensus 179 ~~~-~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~ 256 (447)
+.. +...|++++. +|+. ..++.+++|..+++|+++|+++|+|.|+.| ||+..+++++..|+.+......
T Consensus 154 ~~~~~~~~d~~iv~-----Ept~-~~i~~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~--- 224 (373)
T TIGR01900 154 AHPDWLAADFAIIG-----EPTG-GGIEAGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVN--- 224 (373)
T ss_pred hCcccccCCEEEEE-----CCCC-CcccccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhccccc---
Confidence 642 2245766665 4664 578999999999999999999999999999 9999999999999876431110
Q ss_pred hccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc-----------CC--CC
Q 013216 257 AGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP-----------AS--RN 323 (447)
Q Consensus 257 ~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~-----------~~--~~ 323 (447)
.......++++++.|++|. ..|+||++|++.+|+|+.|.++.+++.+.|+++++. .. .+
T Consensus 225 --~~~~~~~~t~~v~~I~GG~------~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 296 (373)
T TIGR01900 225 --IDGLDYREGLNATFCEGGK------ANNVIPDEARMHLNFRFAPDKDLAEAKALMMGADAGAELGNGEHVAEGGEFDG 296 (373)
T ss_pred --ccCCcccceEEEEEEeCCC------CCcccCCeEEEEEEEecCCCcCHHHHHHHHHhhhhhhhhhHHHHHHhhccccc
Confidence 0011123589999999886 899999999999999999999999999998654321 00 00
Q ss_pred -ceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCC
Q 013216 324 -MTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTP 402 (447)
Q Consensus 324 -~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~ 402 (447)
..++ ++. ....|.. .++.++++++.+.+++++..+..+. ...|+||+++|...|+|++.|||+...
T Consensus 297 ~~~~~---~~~------~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~--~~~g~tD~~~~~~~gip~v~~Gpg~~~- 363 (373)
T TIGR01900 297 QDGIE---IAM------EDEAGGA-LPGLGAPLAQDLIDAVGEEKGRDPL--AKFGWTDVARFSALGIPALNFGAGDPL- 363 (373)
T ss_pred cccce---EEE------cccCCCC-CCCCCCHHHHHHHHHHHhccCCCcc--cccCCccHHHHHhcCCCEEEeCCCChh-
Confidence 0122 210 1122222 2455789999999999998665422 367889999999889999999998754
Q ss_pred CCCCCCCcccc
Q 013216 403 ILLHDHNEFLN 413 (447)
Q Consensus 403 ~~~H~~~E~v~ 413 (447)
++|++|||++
T Consensus 364 -~aH~~dE~v~ 373 (373)
T TIGR01900 364 -FAHKHDEQCP 373 (373)
T ss_pred -hccCCCCCCC
Confidence 6999999985
No 37
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=7.9e-49 Score=387.81 Aligned_cols=342 Identities=18% Similarity=0.228 Sum_probs=273.7
Q ss_pred hhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHC-CCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCC
Q 013216 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEAL-SLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (447)
Q Consensus 27 ~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~-G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~ 105 (447)
.+++++++++|++|||+| ++|.++++||.++|+++ |+++... ..|+++++.+. . .++|+|+|||||||+.
T Consensus 6 ~~~~~~~l~~li~ips~s--~~e~~~~~~l~~~l~~~~~~~~~~~-----~~~~~~~~~~~-~-~~~i~l~~H~Dtvp~~ 76 (352)
T PRK13007 6 AADLAELTAALVDIPSVS--GDEKALADAVEAALRALPHLEVIRH-----GNSVVARTDLG-R-PSRVVLAGHLDTVPVA 76 (352)
T ss_pred HHHHHHHHHHHhcCCCCC--chHHHHHHHHHHHHHhCcCceEEec-----CCeEEEEccCC-C-CCeEEEEccccccCCC
Confidence 478999999999999985 78999999999999996 8876531 24899998432 2 3679999999999986
Q ss_pred CCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcc-cCHHHHHccc-ccc
Q 013216 106 PSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGH-DGAEKFADSH-VFN 183 (447)
Q Consensus 106 ~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~-~G~~~~~~~~-~~~ 183 (447)
+ ||.+.++ ||++||||++|||+++|++|.|++.|. +++++|.|+|+++||+++. .|++.++++. .+.
T Consensus 77 ~------~~~~~~~-~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~ 145 (352)
T PRK13007 77 D------NLPSRRE-GDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWL 145 (352)
T ss_pred C------CCCccee-CCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHHhccccc
Confidence 3 5667786 999999999999999999999999983 3678999999999998642 4888888753 233
Q ss_pred CCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccC
Q 013216 184 SLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAE 262 (447)
Q Consensus 184 ~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 262 (447)
+.|++++.+ |+. ..++.+++|..+++|+++|+++|+|.|+.+ ||+..++++|..|+.+...... ....
T Consensus 146 ~~d~~i~~e-----p~~-~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~-----~~~~ 214 (352)
T PRK13007 146 AGDFAILLE-----PTD-GVIEAGCQGTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVV-----VDGL 214 (352)
T ss_pred CCCEEEEec-----CCC-CceEeeccceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccc-----cCCC
Confidence 467777764 543 468899999999999999999999999988 9999999999999875432100 0001
Q ss_pred CCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCC
Q 013216 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFG 342 (447)
Q Consensus 263 ~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (447)
....+++++.+++|. ..|+||++|++.+|+|++|.++.+++.++|++++.... +++ +. ...
T Consensus 215 ~~~~~~~~~~i~gG~------~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~---~~~---~~-------~~~ 275 (352)
T PRK13007 215 TYREGLNAVRISGGV------AGNVIPDECVVNVNYRFAPDRSLEEALAHVREVFDGFA---EVE---VT-------DLA 275 (352)
T ss_pred CccceeEeEeEecCC------cCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhcccc---EEE---ee-------ccc
Confidence 112478899999886 89999999999999999999999999999998886322 444 32 122
Q ss_pred CCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHH
Q 013216 343 RPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGID 422 (447)
Q Consensus 343 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~ 422 (447)
.|. ....++++++.+.+++ +.. +....|++|++++...|+|++.|||+... ..|++||+++++++.++++
T Consensus 276 ~~~--~~~~~~~~~~~~~~~~---g~~---~~~~~g~td~~~~~~~Gip~v~~Gpg~~~--~~H~~~E~v~i~~l~~~~~ 345 (352)
T PRK13007 276 PGA--RPGLDHPAAAALVAAV---GGE---VRAKYGWTDVARFSALGIPAVNFGPGDPA--LAHQRDEHVPVAQITACAR 345 (352)
T ss_pred CCC--CCCCCCHHHHHHHHHh---CCC---CccccccchHHHHHhCCCCEEEeCCCchh--hccCCCCceEHHHHHHHHH
Confidence 333 3456889998888863 332 23356889999999999999999998653 7999999999999999999
Q ss_pred HHHHHH
Q 013216 423 IYESII 428 (447)
Q Consensus 423 ~~~~~l 428 (447)
+|..++
T Consensus 346 ~~~~~~ 351 (352)
T PRK13007 346 ILRRWL 351 (352)
T ss_pred HHHHHh
Confidence 999876
No 38
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-48 Score=396.82 Aligned_cols=368 Identities=20% Similarity=0.241 Sum_probs=263.7
Q ss_pred CCChhHHHHHHHhhhcccCCCCCCC--------hhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEE
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPNPD--------YTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILL 95 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~~~--------e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill 95 (447)
+++.++++++|++|++|||+|+... ..+.++++.++|+++|++++..+ .+ .++++.+ |. +.++|+|
T Consensus 7 ~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~-~~~~~~~-g~--~~~~lll 80 (444)
T PRK07205 7 EKVQDACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDP--KG-YYGYAEI-GQ--GEELLAI 80 (444)
T ss_pred HHhHHHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcC--CC-eEEEEEe-cC--CCcEEEE
Confidence 5578899999999999999974321 14678888899999999887543 23 3666665 44 3478999
Q ss_pred eeccccCCCCC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHH
Q 013216 96 NSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAE 174 (447)
Q Consensus 96 ~~H~Dtvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~ 174 (447)
+||+||||+++ +.|+++||++.++ ||+|||||++|||++++++|.|++.|++.+.+++++|.|+|++|||+|+ .|++
T Consensus 81 ~gH~DvVp~~~~~~W~~~Pf~~~v~-dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~-~g~~ 158 (444)
T PRK07205 81 LCHLDVVPEGDLSDWQTPPFEAVEK-DGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLW-RCMN 158 (444)
T ss_pred EEeeccCCCCCcccCCCCCCceEEE-CCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCc-ccHH
Confidence 99999999976 7899999999997 9999999999999999999999999999988888999999999999987 6898
Q ss_pred HHHccccccC----Cc--eEEEEec-CC------cCcCCcceeEee-----------ee--------------ee----E
Q 013216 175 KFADSHVFNS----LN--VGIVLDE-GL------ASTTEDYRAFYA-----------ER--------------CP----W 212 (447)
Q Consensus 175 ~~~~~~~~~~----~~--~~~~~d~-g~------~~p~~~~~i~~~-----------~~--------------G~----~ 212 (447)
.+++...... .+ ..++... |. .+|+....+..+ ++ |. .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~v~~~ekG~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~ 238 (444)
T PRK07205 159 RYNEVEEQATMGFAPDSSFPLTYAEKGLLQAKLVGPGSDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVK 238 (444)
T ss_pred HHHhCCCCCCeeECCCCCCceEEEEeceEEEEEEeCCccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeec
Confidence 8887432110 01 1011110 00 012211000000 22 21 2
Q ss_pred EEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhc--c------------ccCCCcceeeeeeeecCC
Q 013216 213 WLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAG--L------------KAEGEVVSVNMAFLKAGT 277 (447)
Q Consensus 213 ~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~--~------------~~~~~~~t~~~~~i~~g~ 277 (447)
+.+++++|+++|+|.|+.| |||..+++++..++.+.. .+.+... . ......++++++
T Consensus 239 ~~~v~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg------ 310 (444)
T PRK07205 239 ENEVTVLGKSVHAKDAPQGINAVIRLAKALVVLEPHPA--LDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIA------ 310 (444)
T ss_pred CcEEEEEeEEcccCCCccCcCHHHHHHHHHHhccHHHH--HHHHHHhcCCCCccccCCccccCCCcCCceEEeE------
Confidence 3489999999999999988 999999999988764321 1101000 0 000011233332
Q ss_pred CCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCcccccCCCChHHH
Q 013216 278 PSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWN 357 (447)
Q Consensus 278 ~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 357 (447)
..|+||++|++.+|+|+.|.++.+++.++|+++++. .+++++ .. ....|. ..+.++++++
T Consensus 311 ------~~nvvP~~a~~~ld~R~~p~~~~e~v~~~i~~~~~~--~~v~~~---~~-------~~~~p~--~~~~~~~lv~ 370 (444)
T PRK07205 311 ------GLTITKEKSEIRIDIRIPVLADKEKLVQQLSQKAQE--YGLTYE---EF-------DYLAPL--YVPLDSELVS 370 (444)
T ss_pred ------EEEEECCEEEEEEEEeCCCCCCHHHHHHHHHHHHHH--cCcEEE---Ee-------cCCCce--eeCCCcHHHH
Confidence 458999999999999999999999999999888753 234333 21 122332 3567899999
Q ss_pred HHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEc---cCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 358 LLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFS---PMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 358 ~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~g---p~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
.+.+++++..+....+..++|++|+.+ ..|++.|| |+... .+|++||+++++++.+++++|..++..++.
T Consensus 371 ~l~~~~~~~~g~~~~~~~~gg~~~~~~----~~~~i~~G~~~Pg~~~--~aH~~nE~v~i~~l~~~~~~l~~~l~~l~~ 443 (444)
T PRK07205 371 TLMSVYQEKTGDDSPAQSSGGATFART----MPNCVAFGALFPGAPQ--TEHQANEHIVLEDLYRAMDIYAEAIYRLTT 443 (444)
T ss_pred HHHHHHHHHhCCCCceEEeccHHHHHh----CCCcEEECCccCCCCC--CCcCcccCccHHHHHHHHHHHHHHHHHHhc
Confidence 999999987544323444556566543 25788999 65433 699999999999999999999999988753
No 39
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=7.6e-49 Score=389.17 Aligned_cols=349 Identities=20% Similarity=0.232 Sum_probs=282.5
Q ss_pred HHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecC---CCCeEEEEecCCCCCCCeEEEeeccccCCCC
Q 013216 29 SIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAK---NKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (447)
Q Consensus 29 ~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~---~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~ 105 (447)
+++++|++|++|||+| ++|.+++++|.++|+++|++++..+..+ +++|+++.++|..+ .|+|+|.||+||||++
T Consensus 1 ~~~~~~~~l~~i~s~s--~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~l~~H~D~V~~~ 77 (361)
T TIGR01883 1 RLKKYFLELIQIDSES--GKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTVK-FDTIFFCGHMDTVPPG 77 (361)
T ss_pred ChHHHHHHHeecCCCC--CcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCCC-CCcEEEEeeccccCCC
Confidence 4688999999999986 7899999999999999999987654321 36899999987643 4899999999999986
Q ss_pred CCCCCcCCCceeeCCCCcEEecCc----ccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHcccc
Q 013216 106 PSKWSHHPFGAHLDSQGNIFARGS----QDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHV 181 (447)
Q Consensus 106 ~~~W~~~Pf~~~~~~~g~l~GrG~----~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~ 181 (447)
+ ||.+.++ +|++||||+ +|||++++++|.+++.|.+.+ .++++|.|+|+++||.|+ .|++.+.+..
T Consensus 78 ~------~~~~~~~-~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~-~G~~~~~~~~- 147 (361)
T TIGR01883 78 A------GPEPVVE-DGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGL-IGMRLFDESK- 147 (361)
T ss_pred C------CCCceec-CCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCc-hhHhHhChhh-
Confidence 3 4556676 999999999 999999999999999998876 467899999999999885 6999887542
Q ss_pred ccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccC-CCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhcc
Q 013216 182 FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGA-KLYDN-SAMENLFKSIESVRRFRASQFDLVKAGL 259 (447)
Q Consensus 182 ~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~-~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~ 259 (447)
. ..+++++++.+ .....++.+++|..+++++++|+++|+| .|+.| ||+..+++++..|.....
T Consensus 148 ~-~~~~~~~~~~~----~~~~~i~~~~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~~---------- 212 (361)
T TIGR01883 148 I-TAAYGYCLDAP----GEVGNIQLAAPTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGRI---------- 212 (361)
T ss_pred c-CcceeEEEeCC----CCcceEEecCCceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccCC----------
Confidence 2 24677777632 1223578899999999999999999985 69999 999999999988854211
Q ss_pred ccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccC--CCCceEeeccccccccc
Q 013216 260 KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFELGQFKQRASL 337 (447)
Q Consensus 260 ~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~ 337 (447)
...++++++.+++|. ..|+||++|++.+|+|..|..+.+.+.++|++.++.. ..+.+++ +..
T Consensus 213 ---~~~~~~~i~~i~gG~------~~nvVP~~~~~~~diR~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~---~~~---- 276 (361)
T TIGR01883 213 ---DEETTANIGSFSGGV------NTNIVQDEQLIVAEARSLSFRKAEAQVQTMRERFEQAAEKYGATLE---EET---- 276 (361)
T ss_pred ---CCccccccceeecCC------ccCccCCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCEEE---EEE----
Confidence 112578888889887 8999999999999999999998888888888877632 2344444 331
Q ss_pred cccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHH
Q 013216 338 HDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEY 417 (447)
Q Consensus 338 ~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l 417 (447)
....|.+ .++.++++++.+++++++.+..+ ....+.|++|++++...|+|++.|||+.. .+|++||+++++++
T Consensus 277 --~~~~~~~-~~~~~~~lv~~l~~a~~~~g~~~-~~~~~~g~tD~~~~~~~giP~v~~G~g~~---~~Hs~~E~v~i~~~ 349 (361)
T TIGR01883 277 --RLIYEGF-KIHPQHPLMNIFKKAAKKIGLKT-SEIFSGGGSDANVLNEKGVPTVNLSAGYV---HAHTEKETISIEQL 349 (361)
T ss_pred --Eeccccc-cCCCCCHHHHHHHHHHHHcCCCc-EEEecCcccHHHHHhhCCCceEEECCCcc---cCcCcceeEEHHHH
Confidence 1223333 45668899999999999876544 44556789999999988999999999974 69999999999999
Q ss_pred HHHHHHHHHHH
Q 013216 418 LKGIDIYESII 428 (447)
Q Consensus 418 ~~~~~~~~~~l 428 (447)
.+++++|..++
T Consensus 350 ~~~~~~~~~~~ 360 (361)
T TIGR01883 350 VKLAELVIALA 360 (361)
T ss_pred HHHHHHHHHHh
Confidence 99999999876
No 40
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=8.1e-49 Score=394.19 Aligned_cols=360 Identities=19% Similarity=0.237 Sum_probs=278.1
Q ss_pred HHHHHHHhhhcccCCCC--------CCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccc
Q 013216 29 SIIERFRAYLQIDTSQP--------NPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTD 100 (447)
Q Consensus 29 ~~~~~l~~l~~ips~s~--------~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~D 100 (447)
+.++.|.+|++|||+|. +.++.++++||.++|+++|++...++ +++||+++++|++++.|+|+|+||+|
T Consensus 2 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~---~~~nvi~~~~g~~~~~~~lll~~H~D 78 (404)
T PRK13381 2 QLTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLEDIVID---EHAIVTAKLPGNTPGAPRIGFIAHLD 78 (404)
T ss_pred cHHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCCcEEEc---CCeEEEEEEecCCCCCCeEEEEEEec
Confidence 46889999999999973 23578999999999999999655443 77899999987765558999999999
Q ss_pred cCCCCCC--------CCCcCCCcee------------------eCCCCcEEecCc----ccchhHHHHHHHHHHHHHHcC
Q 013216 101 VVPSEPS--------KWSHHPFGAH------------------LDSQGNIFARGS----QDMKCVGMQYLEAIRRLKASG 150 (447)
Q Consensus 101 tvp~~~~--------~W~~~Pf~~~------------------~~~~g~l~GrG~----~D~k~~~a~~l~a~~~l~~~~ 150 (447)
|||+++. .|+.+||.+. .+ ++++||||+ +|||++++++|.|++.|.+.+
T Consensus 79 ~Vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~ 157 (404)
T PRK13381 79 TVDVGLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQG-EDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE 157 (404)
T ss_pred CCCccCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccC-CcEEeCCCccccccccHHHHHHHHHHHHHHHhcC
Confidence 9998753 2554444332 23 677999999 999999999999999998875
Q ss_pred CCCceeEEEEeecCcccCcccCHHHHHccccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCC-CC
Q 013216 151 FQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAK-LY 229 (447)
Q Consensus 151 ~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~-p~ 229 (447)
.++++|.|+|+++||+|+ .|++.++.+. +. .|+.+++|.+ +|+ .+..+++|..+++|+++|+++|++. |+
T Consensus 158 -~~~g~i~~~~~~dEE~g~-~G~~~~~~~~-~~-~d~~~~~~~~--~~~---~i~~~~~G~~~~~v~v~Gk~aHa~~~p~ 228 (404)
T PRK13381 158 -VEHGDIVVAFVPDEEIGL-RGAKALDLAR-FP-VDFAYTIDCC--ELG---EVVYENFNAASAEITITGVTAHPMSAKG 228 (404)
T ss_pred -CCCCCEEEEEEccccccc-ccHHHHHHhc-CC-CCEEEEecCC--Ccc---eEEEecCcceEEEEEEEeEecCCCCCcc
Confidence 467899999999999986 6999997653 33 5778887755 343 4677899999999999999999875 78
Q ss_pred CC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHH
Q 013216 230 DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAES 308 (447)
Q Consensus 230 ~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~ 308 (447)
.| |||..+++++.+|+.+..... ......+++++.+++ .|++|++.+|+|+.|.++.+.
T Consensus 229 ~g~NAI~~a~~~i~~l~~~~~~~~--------~~~~~~~i~v~~i~g------------~p~~~~~~~diR~~~~~~~e~ 288 (404)
T PRK13381 229 VLVNPILMANDFISHFPRQETPEH--------TEGREGYIWVNDLQG------------NVNKAKLKLIIRDFDLDGFEA 288 (404)
T ss_pred cCcCHHHHHHHHHHhCCccCCCCC--------CCCcccEEEEEeEEe------------CcceEEEEEEEecCCHHHHHH
Confidence 78 999999999999876532110 001112344444332 289999999999999999999
Q ss_pred HHHHHHHHhccC--CCC-ceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHH
Q 013216 309 LERRIVEEWAPA--SRN-MTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYF 385 (447)
Q Consensus 309 i~~~i~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~ 385 (447)
+.++|+++++.. ..+ .+++ +... .....|.. .+..++++++.+++++++.+..+ ....+.+++|+++|
T Consensus 289 i~~~i~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~-~~~~~~~lv~~l~~a~~~~g~~~-~~~~~~g~tDa~~~ 359 (404)
T PRK13381 289 RKQFIEEVVAKINAKYPTARVS---LTLT----DQYSNISN-SIKDDRRAVDLAFDAMKELGIEP-KVIPMRGGTDGAAL 359 (404)
T ss_pred HHHHHHHHHHHHHHHcCCcEEE---EEEE----eCCchhhc-ccccCHHHHHHHHHHHHHcCCCe-eeccCCccchHHHH
Confidence 999998887632 222 3344 3210 01111222 35668999999999998876543 33456789999999
Q ss_pred HHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 386 RERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 386 ~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
...|+|++.|||+.. .+|++|||++++++.+++++|..++..+++
T Consensus 360 ~~~giP~v~~GpG~~---~aH~~dE~v~i~~l~~~~~v~~~~~~~~~~ 404 (404)
T PRK13381 360 SAKGLPTPNLFTGAH---NFHSRFEFLPVSSFVKSYEVTITICLLAAK 404 (404)
T ss_pred hcCCCCeEEECcccc---CCcCcceeEEHHHHHHHHHHHHHHHHHhcC
Confidence 988999999999975 489999999999999999999999988764
No 41
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=2.4e-48 Score=381.53 Aligned_cols=333 Identities=23% Similarity=0.294 Sum_probs=267.7
Q ss_pred HHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCCCCCCCc
Q 013216 32 ERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSH 111 (447)
Q Consensus 32 ~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~~~W~~ 111 (447)
++|++|++|||.| ++|.++++||.++|+++|+++. .+ ...|+++.. +. +.|+|+|+|||||||.
T Consensus 1 ~~l~~lv~i~s~s--~~e~~~~~~l~~~l~~~g~~~~-~~---~~~~~~~~~-~~--~~~~i~~~~H~D~vp~------- 64 (336)
T TIGR01902 1 ELLKDLLEIYSPS--GKEANAAKFLEEISKDLGLKLI-ID---DAGNFILGK-GD--GHKKILLAGHVDTVPG------- 64 (336)
T ss_pred ChHHHHhcCCCCC--cchHHHHHHHHHHHHHcCCEEE-EC---CCCcEEEEe-CC--CCceEEEEccccccCC-------
Confidence 3689999999986 7889999999999999999874 23 334888865 33 3589999999999985
Q ss_pred CCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCceEEEE
Q 013216 112 HPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVL 191 (447)
Q Consensus 112 ~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~ 191 (447)
+|...++ ||++||||++|||++++++|.|++.|.+.+ .+|.|++++|||+|+ .|++.++++.. .+++++.
T Consensus 65 -~~~~~~~-~g~i~GrG~~D~Kg~~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~-~G~~~~~~~~~---~~~~ii~ 134 (336)
T TIGR01902 65 -YIPVKIE-GGLLYGRGAVDAKGPLIAMIFATWLLNEKG----IKVIVSGLVDEESSS-KGAREVIDKNY---PFYVIVG 134 (336)
T ss_pred -CcccEEe-CCEEEEecccCCCcHHHHHHHHHHHHHhCC----CcEEEEEEeCcccCC-ccHHHHHhhcC---CCEEEEe
Confidence 3556776 999999999999999999999999997643 589999999999986 79999988643 2355665
Q ss_pred ecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHH-hchhhhHHHHHhccccCCCcceeee
Q 013216 192 DEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVR-RFRASQFDLVKAGLKAEGEVVSVNM 270 (447)
Q Consensus 192 d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~-~~~~~~~~~~~~~~~~~~~~~t~~~ 270 (447)
+|++...++.++||..+++++++|+++|+|.|. +|+..+..+++.|. .+... . .-+.+++++
T Consensus 135 -----ept~~~~i~~~~kG~~~~~v~~~G~~~Hss~~~--~ai~~~~~~~~~l~~~~~~~--------~--~~~~~~~~~ 197 (336)
T TIGR01902 135 -----EPSGAEGITLGYKGSLQLKIMCEGTPFHSSSAG--NAAELLIDYSKKIIEVYKQP--------E--NYDKPSIVP 197 (336)
T ss_pred -----cCCCCcceeeeeeeEEEEEEEEEecCcccCCCh--hHHHHHHHHHHHHHHHhccc--------c--CCCCCccee
Confidence 466545689999999999999999999999765 68999999888886 22210 0 001246778
Q ss_pred eeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCcccccC
Q 013216 271 AFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPILTATD 350 (447)
Q Consensus 271 ~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 350 (447)
+.+++|. ..|+||++|++++|+|+.|.++.+++.++|++. ..++++ +. ....|. .++
T Consensus 198 ~~i~gg~------~~nvIP~~a~~~idiR~~p~~~~~~~~~~i~~~-----~~~~~~---~~-------~~~~p~--~~~ 254 (336)
T TIGR01902 198 TIIRFGE------SYNDTPAKLELHFDLRYPPNNKPEEAIKEITDK-----FPICLE---IV-------DETPPY--KVS 254 (336)
T ss_pred EEEEccC------CCcCCCceEEEEEEEeeCCCCCHHHHHHHHHhc-----cCceEE---EE-------eccCce--ecC
Confidence 8888776 899999999999999999999999998888751 123333 22 233343 356
Q ss_pred CCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHc-CCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHH
Q 013216 351 SSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRER-GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIK 429 (447)
Q Consensus 351 ~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~-g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~ 429 (447)
.++|+++.+++++++.+..+ .+....|++|++++.+. |+|++.|||+... .+|++||+++++++.+++++|..++.
T Consensus 255 ~~~~lv~~~~~a~~~~~~~~-~~~~~~g~tD~~~~~~~~g~p~v~~Gpg~~~--~aH~~nE~v~i~~l~~~~~~~~~~l~ 331 (336)
T TIGR01902 255 RNNPLVRAFVRAIRKQGMKP-RLKKKTGTSDMNILAPIWTVPMVAYGPGDST--LDHTPQEKISLAEYLIGIKTLMLAIE 331 (336)
T ss_pred CCCHHHHHHHHHHHHcCCCe-EEeeccccCccceeccccCCCeEEECCCCcc--cCCCCcceeEHHHHHHHHHHHHHHHH
Confidence 78999999999999987543 44456788999999886 9999999998754 68999999999999999999999999
Q ss_pred HHHh
Q 013216 430 AYAS 433 (447)
Q Consensus 430 ~l~~ 433 (447)
.++.
T Consensus 332 ~l~~ 335 (336)
T TIGR01902 332 ELWQ 335 (336)
T ss_pred HHhc
Confidence 8854
No 42
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=1.9e-48 Score=397.72 Aligned_cols=370 Identities=19% Similarity=0.274 Sum_probs=273.8
Q ss_pred CCChhHHHHHHHhhhcccCCCCC----------CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeE
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPN----------PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSI 93 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~----------~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i 93 (447)
+.+.++++++|++|++|||+++. .++.++++|+.++|+++|++++.++ |+++.+.... +.++|
T Consensus 10 ~~~~~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~~~~~~~------n~~~~~~~~~-~~~~l 82 (466)
T PRK07318 10 EKRKDDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGFKTKNVD------NYAGHIEYGE-GEEVL 82 (466)
T ss_pred HHhHHHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCCEEEEec------CccceEEECC-CCCEE
Confidence 45778999999999999999743 2467899999999999999988554 5565554222 34789
Q ss_pred EEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCH
Q 013216 94 LLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGA 173 (447)
Q Consensus 94 ll~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~ 173 (447)
+|+||+||||++ ..|+++||.++++ ||+|||||++|||+++++++.|++.|++.+..++++|.|+|++|||+|+ .|+
T Consensus 83 ~l~gH~DvVp~~-~~W~~~Pf~~~~~-dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~-~G~ 159 (466)
T PRK07318 83 GILGHLDVVPAG-DGWDTDPYEPVIK-DGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGW-KCM 159 (466)
T ss_pred EEEEecCCCCCC-CCCCCCCcceEEE-CCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCc-hhH
Confidence 999999999987 4799999999997 9999999999999999999999999999888888999999999999987 799
Q ss_pred HHHHccccccCCceEEEEecCC----cC----------------------------cCCc--------------------
Q 013216 174 EKFADSHVFNSLNVGIVLDEGL----AS----------------------------TTED-------------------- 201 (447)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~d~g~----~~----------------------------p~~~-------------------- 201 (447)
+++++.+... ++.++.|... .+ +++.
T Consensus 160 ~~l~~~~~~~--~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~ 237 (466)
T PRK07318 160 DYYFEHEEAP--DFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIAA 237 (466)
T ss_pred HHHHHhCCCC--CEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHHH
Confidence 9999864221 2222222100 00 1100
Q ss_pred ---ceeEeeeeeeE-----EEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhh--hHHHHHh-------------
Q 013216 202 ---YRAFYAERCPW-----WLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRAS--QFDLVKA------------- 257 (447)
Q Consensus 202 ---~~i~~~~~G~~-----~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~--~~~~~~~------------- 257 (447)
+.+..++||.. +++|+++|+++|++.|+.| |||..++++|..|...... .++.+..
T Consensus 238 ~~~~~~~~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (466)
T PRK07318 238 FEAFLAENGLKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLGI 317 (466)
T ss_pred HHHHHhhcCceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCCC
Confidence 00112567755 7999999999999999999 9999999999988642110 0111100
Q ss_pred -ccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeecccccccc
Q 013216 258 -GLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRAS 336 (447)
Q Consensus 258 -~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~ 336 (447)
........+|++++.+++|. .. .|++.+|+|+.|..+.+++.++|++.++. .+++++ +.
T Consensus 318 ~~~~~~~g~~t~nvg~i~gg~------~~-----~~~~~iDiR~~p~~~~~~v~~~i~~~~~~--~~~~~~---~~---- 377 (466)
T PRK07318 318 AYEDDVMGDLTMNVGVFSFDE------EK-----GGTLGLNFRYPVGTDFEKIKAKLEKLIGV--TGVELS---EH---- 377 (466)
T ss_pred cccCCCccCeEEEeeEEEEec------Cc-----EEEEEEEEeCCCCCCHHHHHHHHHHHHHh--cCeEEE---Ec----
Confidence 00001123578888888764 21 79999999999999999999999888753 234443 22
Q ss_pred ccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHH
Q 013216 337 LHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAE 416 (447)
Q Consensus 337 ~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~ 416 (447)
....|.. .+.++++++.+++++++..+..+.+..++|++|++++.. ++|...++|+.. .++|++||++++++
T Consensus 378 ---~~~~p~~--~~~d~~lv~~l~~a~~~~~g~~~~~~~~~ggtDa~~~~~-~i~~Gp~~pg~~--~~aH~~dE~v~i~~ 449 (466)
T PRK07318 378 ---EHQKPHY--VPKDDPLVKTLLKVYEKQTGLKGEEQVIGGGTYARLLKR-GVAFGAMFPGSE--DTMHQANEYIEIDD 449 (466)
T ss_pred ---cCCCcee--eCCCCHHHHHHHHHHHHHhCCCCCeeEEcchHhHhhCCC-eEEeCCCCCCCC--CCCcCCCcceeHHH
Confidence 2333433 466899999999999986544435566788999999964 444222224433 25899999999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 013216 417 YLKGIDIYESIIKAYAS 433 (447)
Q Consensus 417 l~~~~~~~~~~l~~l~~ 433 (447)
+.+++++|..++..+++
T Consensus 450 l~~~~~v~~~~l~~~~~ 466 (466)
T PRK07318 450 LIKAAAIYAEAIYELAK 466 (466)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 99999999999998863
No 43
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=3.1e-47 Score=385.71 Aligned_cols=367 Identities=14% Similarity=0.130 Sum_probs=283.6
Q ss_pred hhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCCC
Q 013216 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP 106 (447)
Q Consensus 27 ~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~ 106 (447)
.+.+.++.+.++++|+. +++|.+++++|.++|+++|++++... +..|+++.+ |.++ .|+|+|+||||+||+++
T Consensus 96 ~~~l~~l~r~lh~~PEl--s~~E~~t~~~i~~~L~~~G~~~~~~~---~~~~vva~~-g~~~-~~~I~l~gh~DaVP~~e 168 (478)
T PLN02280 96 VAWLKSVRRKIHENPEL--AFEEYKTSELVRSELDRMGIMYRYPL---AKTGIRAWI-GTGG-PPFVAVRADMDALPIQE 168 (478)
T ss_pred HHHHHHHHHHHhcCCCC--CCcHHHHHHHHHHHHHHCCCeEEecC---CCCEEEEEE-CCCC-CCEEEEEEecCCCcccC
Confidence 45566677778888886 48999999999999999999987532 567999998 5433 38999999999999976
Q ss_pred -CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCC
Q 013216 107 -SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSL 185 (447)
Q Consensus 107 -~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~ 185 (447)
.+|+++| ++ +|++|||| +|+++|+++.|++.|.+.+.+++++|.|+|++|||+| .|++++++++.+++.
T Consensus 169 ~~~w~~~p----~~-~G~~h~cG---hd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g--~Ga~~li~~g~~~~~ 238 (478)
T PLN02280 169 AVEWEHKS----KV-AGKMHACG---HDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAG--NGAKRMIGDGALDDV 238 (478)
T ss_pred CCCCCCCC----CC-CCeEEeCC---CcHHHHHHHHHHHHHHhccccCCceEEEEeccccccc--chHHHHHHCCCCcCC
Confidence 6799999 44 89999999 3569999999999998887778999999999999986 399999999888777
Q ss_pred ceEEEEecCCcCcCCcc--eeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccC
Q 013216 186 NVGIVLDEGLASTTEDY--RAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAE 262 (447)
Q Consensus 186 ~~~~~~d~g~~~p~~~~--~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 262 (447)
|..+.++.+..+|++.. ......+|..+++|+++|+++|++.|+.| ||+..+++++..|+.+.... ...
T Consensus 239 d~~~~~h~~~~~p~g~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~--------~~~ 310 (478)
T PLN02280 239 EAIFAVHVSHEHPTAVIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVISLQGIVSRE--------ANP 310 (478)
T ss_pred CEEEEEecCCCCCCceeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcc--------cCC
Confidence 77777765433443211 11223459999999999999999999999 99999999999987753211 011
Q ss_pred CCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc--CCCCceEeecccccccccccc
Q 013216 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQRASLHDK 340 (447)
Q Consensus 263 ~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 340 (447)
....+++++.+++|. +.|+||++|++.+|+|+.+.++.+++.++|+++++. ..++++++ ++.. .
T Consensus 311 ~~~~tvnvg~I~GG~------~~NvIPd~~~l~~diR~~~~e~~e~l~~~I~~~~~~~a~~~g~~~~---v~~~-----~ 376 (478)
T PLN02280 311 LDSQVVSVTTMDGGN------NLDMIPDTVVLGGTFRAFSNTSFYQLLKRIQEVIVEQAGVFRCSAT---VDFF-----E 376 (478)
T ss_pred CCCcEEEEEEEEccC------CCCEeCCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEE---EEEe-----c
Confidence 123588999999887 999999999999999999999999999999988763 23455554 3310 1
Q ss_pred CCCCcccccCCCChHHHHHHHHHHHhcCCC--CCceecCCCcchHHHHHcCCCeEEE--ccCCC---CCCCCCCCCcccc
Q 013216 341 FGRPILTATDSSNPWWNLLEEAVRKANGKL--GKPEIFPASTDARYFRERGLPAIGF--SPMAN---TPILLHDHNEFLN 413 (447)
Q Consensus 341 ~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~~~~g~~D~~~~~~~g~p~~~~--gp~~~---~~~~~H~~~E~v~ 413 (447)
...+.++++.++.++++.++++..+..+.. .......|++|+++|... +|++.| |++.. .....|+++|+++
T Consensus 377 ~~~~~~pp~~n~~~l~~~~~~~a~~~~G~~~~~~~~~~~g~tD~~~~~~~-vP~i~~glG~~~~~~G~~~~~Htp~e~id 455 (478)
T PLN02280 377 KQNTIYPPTVNNDAMYEHVRKVAIDLLGPANFTVVPPMMGAEDFSFYSQV-VPAAFYYIGIRNETLGSTHTGHSPYFMID 455 (478)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHhcCccccccCCCCeeechHHHHHhh-CCEEEEEEeecCCCCCCCCCCCCCCCcCC
Confidence 112223345668899999999887764432 111234688999999985 998866 44321 1126899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 013216 414 QAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 414 ~~~l~~~~~~~~~~l~~l~~ 433 (447)
+++|..++++|+.++..+..
T Consensus 456 ~~~L~~~~~~~~~~~~~~l~ 475 (478)
T PLN02280 456 EDVLPIGAAVHAAIAERYLI 475 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999988764
No 44
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-46 Score=387.69 Aligned_cols=372 Identities=20% Similarity=0.310 Sum_probs=275.4
Q ss_pred CChhHHHHHHHhhhcccCCCCC---CCh----hHHHHHHHHHHHHCCCceEEEeecCCCCeEE--EEecCCCCCCCeEEE
Q 013216 25 KSDDSIIERFRAYLQIDTSQPN---PDY----TNASKFILAQAEALSLESQTLEFAKNKPLIL--LKWPGSNPQLPSILL 95 (447)
Q Consensus 25 ~~~~~~~~~l~~l~~ips~s~~---~~e----~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~--~~~~g~~~~~~~ill 95 (447)
++.++++++|++|++|||+|+. ++| ..+++||.++|+++|++++.. + |++ +.++|. +.|+|+|
T Consensus 43 ~~~~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~~~~l~~~l~~~G~~~~~~----~--~~v~~~~~~g~--~~~~l~l 114 (520)
T PRK06156 43 KYGAAAIESLRELVAFPTVRVEGVPQHENPEFIGFKKLLKSLARDFGLDYRNV----D--NRVLEIGLGGS--GSDKVGI 114 (520)
T ss_pred hhHHHHHHHHHHhcCcCcccCCCCCccCCccHHHHHHHHHHHHHHCCCeEEec----C--CeEEEEEecCC--CCCeEEE
Confidence 4567899999999999999742 122 356789999999999988632 2 444 566654 3489999
Q ss_pred eeccccCCCCCCCCCc-----CCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcc
Q 013216 96 NSHTDVVPSEPSKWSH-----HPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGH 170 (447)
Q Consensus 96 ~~H~Dtvp~~~~~W~~-----~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~ 170 (447)
.|||||||+++..|++ +||.+.++ ||++||||++|||+++++++.|++.|.+.+.+++++|.|+|++|||.|+
T Consensus 115 ~gH~DvVp~~~~~W~~~~~~~~Pf~~~~~-~g~lyGRG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~- 192 (520)
T PRK06156 115 LTHADVVPANPELWVLDGTRLDPFKVTLV-GDRLYGRGTEDDKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDG- 192 (520)
T ss_pred EEecCccCCCCccCccCCccCCCCceEEE-CCEEEEcCcccchHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCc-
Confidence 9999999998788999 99999997 9999999999999999999999999999888888999999999999987
Q ss_pred cCHHHHHccccccCCceEEEEecCC----cCcCC----------------------------------cc----------
Q 013216 171 DGAEKFADSHVFNSLNVGIVLDEGL----ASTTE----------------------------------DY---------- 202 (447)
Q Consensus 171 ~G~~~~~~~~~~~~~~~~~~~d~g~----~~p~~----------------------------------~~---------- 202 (447)
.|++.++.++.. .++.+++|... .+|+. ..
T Consensus 193 ~G~~~~~~~~~~--~~~~~~~D~~~~~~~~E~~~~~~~i~~~~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~ 270 (520)
T PRK06156 193 DPLKYYLERYTP--PDYNITLDAEYPVVTAEKGWGTIMATFPKRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAA 270 (520)
T ss_pred hhHHHHHHhcCC--CCeEEeeCCCCceEEEecceEEEEEEecCcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHH
Confidence 699999876432 24444444210 01110 00
Q ss_pred ----------eeEeeeeeeE---------EEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchh-hhH----HHHHh
Q 013216 203 ----------RAFYAERCPW---------WLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRA-SQF----DLVKA 257 (447)
Q Consensus 203 ----------~i~~~~~G~~---------~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~-~~~----~~~~~ 257 (447)
....+++|.. +++|+++|+++|+|.|+.| |||..+++++..|+++.. ... +.+..
T Consensus 271 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHsS~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~ 350 (520)
T PRK06156 271 LAAALQAAAAAQVKRHGGGFSIDFKRDGKDVTITVTGKSAHSSTPESGVNPVTRLALFLQSLDGDLPHNHAADAARYIND 350 (520)
T ss_pred HHHHHHHHHHHHHhhcccCceEEEEEcCCeEEEEEEeEECCCCCCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHH
Confidence 0011223443 8999999999999999999 999999999999876211 100 11110
Q ss_pred --cc------------ccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccC--C
Q 013216 258 --GL------------KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--S 321 (447)
Q Consensus 258 --~~------------~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~ 321 (447)
+. ......++++++.+++|. +.|++.+|+|++|.++.+++.++|++.++.. .
T Consensus 351 ~~~~~~~g~~~g~~~~~~~~g~~t~~~~~I~gg~------------~~~~l~iDiR~~p~~~~eev~~~I~~~i~~~~~~ 418 (520)
T PRK06156 351 LVGLDYLGEKFGVAYKDDFMGPLTLSPTVVGQDD------------KGTEVTVNLRRPVGKTPELLKGEIADALAAWQAK 418 (520)
T ss_pred hhCCCCccCcCCccccCCCccCcEEeeeEEEEeC------------CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 00 000012345555555442 5899999999999999999999999887632 2
Q ss_pred CCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCC
Q 013216 322 RNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANT 401 (447)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~ 401 (447)
.+++++ +.. ....|. ..+.++|+++.+.+++++..+..+.+..++|+||++++. +++.|||+..+
T Consensus 419 ~gv~ve---~~~------~~~~p~--~~~~d~~lv~~l~~a~~~~~G~~~~~~~~~ggTDa~~~~----~~v~fGP~~~g 483 (520)
T PRK06156 419 HQVALD---IDY------YWGEPM--VRDPKGPWLKTLLDVFGHFTGLDAKPVAIAGSTNAKLFP----NAVSFGPAMPG 483 (520)
T ss_pred cCceEE---Eee------cCCCce--eeCCCCHHHHHHHHHHHHHhCCCCceeeecChhhhhhCC----ccEEEcCCCCC
Confidence 344455 321 122333 356689999999999998866544666778999999874 58999997332
Q ss_pred -CCCCCCCCccccHHHHHHHHHHHHHHHHHHHhhc
Q 013216 402 -PILLHDHNEFLNQAEYLKGIDIYESIIKAYASYV 435 (447)
Q Consensus 402 -~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~~~ 435 (447)
...+|++||+++++++.+++++|..++..+++++
T Consensus 484 ~~~~aHt~dE~V~ie~l~~~~~i~~~~l~~l~~~~ 518 (520)
T PRK06156 484 VKYTGHTENEFKTVEQFMLDLQMYTEMLIRIGNLP 518 (520)
T ss_pred CCCCCcCcccCCCHHHHHHHHHHHHHHHHHHhccc
Confidence 2358999999999999999999999999998743
No 45
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=6.4e-46 Score=373.93 Aligned_cols=365 Identities=17% Similarity=0.148 Sum_probs=283.0
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCC
Q 013216 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (447)
Q Consensus 26 ~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~ 105 (447)
..+++++++++|+++|+.| ++|.+++++|.++|+++|++++. . .+.+|+++.+ |.++ +|+|+|+|||||||++
T Consensus 45 ~~~~~~~~r~~lh~~PE~s--~~E~~ta~~i~~~L~~~G~~~~~-~--~~~~~via~~-g~~~-g~~i~l~~h~DaVp~~ 117 (437)
T PLN02693 45 VFDWMVRIRRKIHENPELG--YEEFETSKLIRSELDLIGIKYRY-P--VAITGIIGYI-GTGE-PPFVALRADMDALPIQ 117 (437)
T ss_pred hHHHHHHHHHHHHhCCCCC--CchHHHHHHHHHHHHHCCCeeEe-c--CCCcEEEEEE-CCCC-CCEEEEEeecCCCcCC
Confidence 3467899999999999985 89999999999999999998763 2 1567999998 4333 4899999999999997
Q ss_pred C-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccC
Q 013216 106 P-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNS 184 (447)
Q Consensus 106 ~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~ 184 (447)
+ .+|+++||. +|++|||| ||+++|+++.|++.|.+.+..++++|.|+|+++||. + .|++.+++++.+++
T Consensus 118 e~~~~~~~p~~-----~G~~hacG---hkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~-~-~Ga~~~i~~g~~~~ 187 (437)
T PLN02693 118 EAVEWEHKSKI-----PGKMHACG---HDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEG-L-SGAKKMREEGALKN 187 (437)
T ss_pred CCCCCCCCCCC-----CCCEECCc---chHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccc-h-hhHHHHHHCCCCCC
Confidence 6 679999983 79999766 699999999999999988766789999999999994 3 59999999887765
Q ss_pred CceEEEEecCCcCcCCcceeEe----eeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhcc
Q 013216 185 LNVGIVLDEGLASTTEDYRAFY----AERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGL 259 (447)
Q Consensus 185 ~~~~~~~d~g~~~p~~~~~i~~----~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~ 259 (447)
.+..+..+.....+.+ .+.. ..+|..+++|+++|+++|+|.|+.| |||..+++++.+|+.+.....
T Consensus 188 ~~~iig~h~~p~~~~g--~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~------- 258 (437)
T PLN02693 188 VEAIFGIHLSPRTPFG--KAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRET------- 258 (437)
T ss_pred CCEEEEEecCCCCCCe--eEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccC-------
Confidence 5655544432111211 1221 1468889999999999999999999 999999999999987632110
Q ss_pred ccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc--CCCCceEeeccccccccc
Q 013216 260 KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQRASL 337 (447)
Q Consensus 260 ~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~ 337 (447)
.+....+++++.+++|. +.|+||++|++.+|+|+.+. .+.+.++|+++++. ..++.+++ ++..
T Consensus 259 -~~~~~~ti~vg~i~GG~------~~NvVPd~a~~~~diR~~~~--~~~i~~~i~~i~~~~a~~~g~~~e---~~~~--- 323 (437)
T PLN02693 259 -DPLDSKVVTVSKVNGGN------AFNVIPDSITIGGTLRAFTG--FTQLQQRIKEIITKQAAVHRCNAS---VNLT--- 323 (437)
T ss_pred -CCCCCcEEEEEEEEcCC------CCceECCeEEEEEEEecCCH--HHHHHHHHHHHHHHHHHHhCCcEE---EEEe---
Confidence 01123689999999887 99999999999999999986 46888999888763 23455555 3310
Q ss_pred cccCCCCcccccCCCChHHHHHHHHHHHhcCCCCC--ceecCCCcchHHHHHcCCCeE--EEccCCCC--CCCCCCCCcc
Q 013216 338 HDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGK--PEIFPASTDARYFRERGLPAI--GFSPMANT--PILLHDHNEF 411 (447)
Q Consensus 338 ~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~~~~g~~D~~~~~~~g~p~~--~~gp~~~~--~~~~H~~~E~ 411 (447)
....|++.++.++.++++.+.+++++..+.... .....|++|++++.+ .+|.+ .+|++... ....|+|+|+
T Consensus 324 --~~~~~~~~~~~nd~~l~~~~~~~~~~~~G~~~~~~~~~~~gseDf~~~~~-~vP~~~~~lG~~~~~~~~~~~H~~~f~ 400 (437)
T PLN02693 324 --PNGREPMPPTVNNMDLYKQFKKVVRDLLGQEAFVEAAPEMGSEDFSYFAE-TIPGHFSLLGMQDETNGYASSHSPLYR 400 (437)
T ss_pred --ecCccCCCCccCCHHHHHHHHHHHHHhcCCcceeecCCCceechHHHHHH-HhhhhEEEEecCCCCCCCCCCCCCCcC
Confidence 123445556777889999999999997553311 223458999999998 48875 66665211 1368999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhh
Q 013216 412 LNQAEYLKGIDIYESIIKAYASY 434 (447)
Q Consensus 412 v~~~~l~~~~~~~~~~l~~l~~~ 434 (447)
++.+.+..++++|+.++..+++.
T Consensus 401 ~de~~l~~~~~~~~~~~~~~l~~ 423 (437)
T PLN02693 401 INEDVLPYGAAIHATMAVQYLKE 423 (437)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999988654
No 46
>PRK08554 peptidase; Reviewed
Probab=100.00 E-value=3.4e-46 Score=376.65 Aligned_cols=375 Identities=20% Similarity=0.222 Sum_probs=266.4
Q ss_pred HHHHHHHhhhcccCCCCCC----ChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCC
Q 013216 29 SIIERFRAYLQIDTSQPNP----DYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS 104 (447)
Q Consensus 29 ~~~~~l~~l~~ips~s~~~----~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~ 104 (447)
+++++|++|++|||+++.. .+.++++++.++|+++|++++.++.. +.+|+++.+ |. +.++|+|.|||||||+
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~-~~~~l~~~~-~~--~~~~l~l~gH~DtVp~ 77 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGIESELIEKD-GYYAVYGEI-GE--GKPKLLFMAHFDVVPV 77 (438)
T ss_pred hHHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCCeEEEEecC-CceEEEEEe-CC--CCCEEEEEeccccCCC
Confidence 5789999999999987322 26789999999999999998876643 567999997 43 2378999999999999
Q ss_pred CCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccc--cc
Q 013216 105 EPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH--VF 182 (447)
Q Consensus 105 ~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~--~~ 182 (447)
+++.|+++||.+.++ ||++||||++|||++++++|.|++.|.+.+ ++++|.|+|++|||+|+. +...+++.. ..
T Consensus 78 ~~~~w~~~Pf~~~~~-~g~lyGrG~~DmKgg~aa~l~A~~~l~~~~--~~~~i~l~~~~dEE~g~~-~~~~~~~~~~~~~ 153 (438)
T PRK08554 78 NPEEWNTEPFKLTVK-GDKAYGRGSADDKGNVASVMLALKELSKEP--LNGKVIFAFTGDEEIGGA-MAMHIAEKLREEG 153 (438)
T ss_pred CccccccCCceeEEE-CCEEEECCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEcccccCcc-ccHHHHHHHHhcC
Confidence 876799999999997 999999999999999999999999997743 678999999999999874 444655432 11
Q ss_pred cCCceEEEEecCCcCcCCcceeEeeeeee-------------------EEEEEEEeec-CCccCCCCCC---CHHHHHHH
Q 013216 183 NSLNVGIVLDEGLASTTEDYRAFYAERCP-------------------WWLVIKARGA-PGHGAKLYDN---SAMENLFK 239 (447)
Q Consensus 183 ~~~~~~~~~d~g~~~p~~~~~i~~~~~G~-------------------~~~~i~v~G~-~~Hs~~p~~g---nai~~~~~ 239 (447)
...+++++.+ |+....++.+++|. .++.+++.|. .+|++.+..+ +++..+++
T Consensus 154 ~~~~~~iv~E-----pt~~~~~~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~ 228 (438)
T PRK08554 154 KLPKYMINAD-----GIGMKPIIRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASH 228 (438)
T ss_pred CCCCEEEEeC-----CCCCcchhhcCCceEEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHHHHH
Confidence 2357778775 44322222333333 2333444454 4999987665 45777776
Q ss_pred HHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCC---C--------------------------CCcccccc--
Q 013216 240 SIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPS---P--------------------------NGFVMNLQ-- 288 (447)
Q Consensus 240 ~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~---~--------------------------~~~~~n~i-- 288 (447)
++..+..+.......... ........++++.....|... . -+...|++
T Consensus 229 ~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i 307 (438)
T PRK08554 229 FLRESNVLAVSLEGKFLK-GNVVPGEVTLTYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSF 307 (438)
T ss_pred HHhhcCceEEEEeeeeee-cCcccceeEEEEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEe
Confidence 665554321000000000 000000112222221112100 0 01155666
Q ss_pred -CCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhc
Q 013216 289 -PSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKAN 367 (447)
Q Consensus 289 -P~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~ 367 (447)
|+.|++.+|+|+.+ .+.+++.++|++.++...++++++ +.. ....|.. .++.++++++.+++++++.+
T Consensus 308 ~~g~a~~~~DiR~~~-~~~e~v~~~i~~~~~~~~~~~~~~---~~~------~~~~~~~-~~~~~~~lv~~~~~~~~~~g 376 (438)
T PRK08554 308 AEGKHVLKLDIRAMS-YSKEDIERTLKEVLEFNLPEAEVE---IRT------NEKAGYL-FTPPDEEIVKVALRVLKELG 376 (438)
T ss_pred cCCeEEEEEEEEecC-CCHHHHHHHHHHHhhccCCCceEE---EEe------ccCCCCc-CCCCChHHHHHHHHHHHHhC
Confidence 99999999999988 689999999998886433455555 431 1122332 35678999999999999976
Q ss_pred CCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013216 368 GKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 432 (447)
Q Consensus 368 ~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~ 432 (447)
... .+...+|+||+++++..|+|++.|||+.. +.|++|||++++++.+++++|.+++..|+
T Consensus 377 ~~~-~~~~~~GgtDa~~~~~~Gip~v~~Gp~~~---~~H~~~E~v~i~~l~~~~~i~~~~i~~l~ 437 (438)
T PRK08554 377 EDA-EPVEGPGASDSRYFTPYGVKAIDFGPKGG---NIHGPNEYVEIDSLKKMPEVYKRIALRLL 437 (438)
T ss_pred CCc-EEEecCCchHHHHHHhcCCCceEECCCCC---CCCCCcceEEHHHHHHHHHHHHHHHHHHh
Confidence 544 66777899999999999999999999865 59999999999999999999999998875
No 47
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=6.3e-47 Score=380.99 Aligned_cols=363 Identities=20% Similarity=0.194 Sum_probs=276.2
Q ss_pred hHHHHHHHhhhcccCCCCC--------CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCC-CCCCeEEEeec
Q 013216 28 DSIIERFRAYLQIDTSQPN--------PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSN-PQLPSILLNSH 98 (447)
Q Consensus 28 ~~~~~~l~~l~~ips~s~~--------~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~-~~~~~ill~~H 98 (447)
+++++.|++|++|||+|.. .++.+++++|.++|+++|++...++ ..+||++.++|+. ++.|+|+|+||
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~---~~~~v~~~~~g~~~~~~~~i~l~~H 78 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQDVTLD---ENGYVMATLPANVDKDVPTIGFIAH 78 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEEEC---CCeEEEEEecCCCCCCCCeEEEEEe
Confidence 5789999999999999733 3478999999999999999743343 3458999998753 34599999999
Q ss_pred cccCCCCC----------------------CCCCcCCCceeeC---CCCcEEecCc----ccchhHHHHHHHHHHHHHHc
Q 013216 99 TDVVPSEP----------------------SKWSHHPFGAHLD---SQGNIFARGS----QDMKCVGMQYLEAIRRLKAS 149 (447)
Q Consensus 99 ~Dtvp~~~----------------------~~W~~~Pf~~~~~---~~g~l~GrG~----~D~k~~~a~~l~a~~~l~~~ 149 (447)
|||||+.+ ..|.++||.+... ..+.+||||+ +|||++++++|.|++.|.+.
T Consensus 79 ~D~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~ 158 (408)
T PRK05469 79 MDTAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAH 158 (408)
T ss_pred ccCCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhC
Confidence 99998754 2344555554443 1267999998 99999999999999999888
Q ss_pred CCCCceeEEEEeecCcccCcccCHHHHHccccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCC-C
Q 013216 150 GFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAK-L 228 (447)
Q Consensus 150 ~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~-p 228 (447)
+..++++|+|+|+++||+| .|++.++.+. + ..++.++++.+ +.+ .+..+.+|..+++|+++|+++|++. |
T Consensus 159 ~~~~~g~v~~~f~~dEE~g--~Ga~~~~~~~-~-~~~~~~~~~~~---~~g--~~~~~~~g~~~~~i~v~Gk~~Ha~~~p 229 (408)
T PRK05469 159 PEIKHGDIRVAFTPDEEIG--RGADKFDVEK-F-GADFAYTVDGG---PLG--ELEYENFNAASAKITIHGVNVHPGTAK 229 (408)
T ss_pred CCCCCCCEEEEEecccccC--CCHHHhhhhh-c-CCcEEEEecCC---Ccc--eEEeccCceeEEEEEEeeecCCCCCCc
Confidence 7667899999999999986 4998886432 2 24667777642 333 4667789999999999999999875 7
Q ss_pred CCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHH
Q 013216 229 YDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAE 307 (447)
Q Consensus 229 ~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~ 307 (447)
+.| ||+..+++++..|+.+.... .......+++++.++ ..|++|++.+|+|+.+.++.+
T Consensus 230 ~~g~nAi~~~~~~i~~l~~~~~~~--------~~~~~~~~i~~g~i~------------ggp~~~~i~~diR~~~~e~~e 289 (408)
T PRK05469 230 GKMVNALLLAADFHAMLPADETPE--------TTEGYEGFYHLTSIK------------GTVEEAELSYIIRDFDREGFE 289 (408)
T ss_pred ccccCHHHHHHHHHHhCCCCCCCC--------CCCCceEEEEEEEEE------------EccceEEEEEEEecCCHHHHH
Confidence 888 99999999999887543210 000111234444444 347999999999999999999
Q ss_pred HHHHHHHHHhccC--CC-CceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHH
Q 013216 308 SLERRIVEEWAPA--SR-NMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARY 384 (447)
Q Consensus 308 ~i~~~i~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~ 384 (447)
.+.++|+++++.. .+ +.+++ ++.. ..+.+....+..++++++.+++++++.+... ....+.|++|+++
T Consensus 290 ~i~~~i~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~~lv~~~~~a~~~~g~~~-~~~~~~ggtD~~~ 360 (408)
T PRK05469 290 ARKALMQEIAKKVNAKYGEGRVE---LEIK-----DQYYNMREKIEPHPHIVDLAKQAMEDLGIEP-IIKPIRGGTDGSQ 360 (408)
T ss_pred HHHHHHHHHHHHHHHHcCCCeEE---EEEe-----ehhhhhhhhhcCCHHHHHHHHHHHHHcCCCc-EEecCCCcccHHH
Confidence 9999999888742 12 34444 3210 1222222246778999999999999876443 3345679999999
Q ss_pred HHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhh
Q 013216 385 FRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASY 434 (447)
Q Consensus 385 ~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~~ 434 (447)
|...|+|++.|||+.. ..|++||+++++++.+++++|..++..++..
T Consensus 361 ~~~~giP~v~~gpG~~---~~H~~~E~v~i~~l~~~~~~~~~~~~~~~~~ 407 (408)
T PRK05469 361 LSFMGLPCPNIFTGGH---NFHGKFEFVSLESMEKAVEVIVEIAELTAER 407 (408)
T ss_pred HhhCCCceEEECcCcc---cCcCcceeeEHHHHHHHHHHHHHHHHHHhcC
Confidence 9988999999999864 5999999999999999999999999888754
No 48
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=100.00 E-value=4.8e-45 Score=368.95 Aligned_cols=360 Identities=19% Similarity=0.277 Sum_probs=262.9
Q ss_pred hHHHHHHHhhhcccCCC----CC------CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEec-CCCCCCCeEEEe
Q 013216 28 DSIIERFRAYLQIDTSQ----PN------PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWP-GSNPQLPSILLN 96 (447)
Q Consensus 28 ~~~~~~l~~l~~ips~s----~~------~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~-g~~~~~~~ill~ 96 (447)
++++++|++|++|||+| +. .++.++++++.++|+++|++++.+. |+.+... +. +.|+|+|+
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~------~~~~~~~~~~--~~~~l~l~ 73 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGFTTENVD------NYAGYAEYGQ--GEEYLGIL 73 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCceEEEec------CceEEEEeCC--CCCeEEEE
Confidence 47899999999999997 21 1246899999999999999987443 3333322 22 34789999
Q ss_pred eccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHH
Q 013216 97 SHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKF 176 (447)
Q Consensus 97 ~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~ 176 (447)
|||||||+++ .|+++||+++++ ||+|||||++|||+++++++.|++.|.+.+.+++++|.|+|++|||+|+ .|++.+
T Consensus 74 gH~D~Vp~~~-~W~~~Pf~~~~~-~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-~g~~~~ 150 (447)
T TIGR01887 74 GHLDVVPAGD-GWTSPPFEAEIK-DGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGW-ACIDYY 150 (447)
T ss_pred eecCCCCCCC-CCcCCCCceEEE-CCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCc-HhHHHH
Confidence 9999999975 799999999997 9999999999999999999999999999888889999999999999986 699988
Q ss_pred HccccccC----Cce---EEEEecC----------------------CcCcCCcc----eeEeeee--------------
Q 013216 177 ADSHVFNS----LNV---GIVLDEG----------------------LASTTEDY----RAFYAER-------------- 209 (447)
Q Consensus 177 ~~~~~~~~----~~~---~~~~d~g----------------------~~~p~~~~----~i~~~~~-------------- 209 (447)
++...... .|. +++...| ..+|++.. ..+++++
T Consensus 151 l~~~~~~~~~~~~d~~~~~~~~e~g~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~ 230 (447)
T TIGR01887 151 FEHEEAPDIGFTPDAEFPIIYGEKGIVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFI 230 (447)
T ss_pred HHhcCCCCEEEeCCCCcceEEEecCeEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhh
Confidence 87532110 111 1111110 01243311 1345555
Q ss_pred -----eeE-----EEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHH--hchhhhHHHHHh-------cc----cc---C
Q 013216 210 -----CPW-----WLVIKARGAPGHGAKLYDN-SAMENLFKSIESVR--RFRASQFDLVKA-------GL----KA---E 262 (447)
Q Consensus 210 -----G~~-----~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~--~~~~~~~~~~~~-------~~----~~---~ 262 (447)
|.. +++|+++|+++|+|.|+.| |||..+++++..+. ......++.+.. +. .. .
T Consensus 231 ~~~~~g~~~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 310 (447)
T TIGR01887 231 AKELEGSFEVNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDV 310 (447)
T ss_pred hcCcceEEEecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCC
Confidence 766 8999999999999999999 99999999999886 222111221110 00 00 0
Q ss_pred CCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCC
Q 013216 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFG 342 (447)
Q Consensus 263 ~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (447)
...++++++.|++| .|+.|++.+|+|++|+++.+++.+++.+.+.. ..... +. ...
T Consensus 311 ~~~~t~nvg~I~~g-----------~p~~~~~~~d~R~~p~~~~e~~~~~i~~~~~~---~~~~~---~~-------~~~ 366 (447)
T TIGR01887 311 SGDLTMNVGVIDYE-----------NAEAGLIGLNVRYPVGNDPDTMLKNELAKESG---IVEVT---EN-------GYL 366 (447)
T ss_pred cCCcEEEEEEEEEe-----------CCcEEEEEEEEecCCCCCHHHHHHHHHHHhhC---cEEEE---Ec-------cCC
Confidence 12357888888765 28899999999999999999887877654421 11112 11 123
Q ss_pred CCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCC-CCCCCCCCccccHHHHHHHH
Q 013216 343 RPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANT-PILLHDHNEFLNQAEYLKGI 421 (447)
Q Consensus 343 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~-~~~~H~~~E~v~~~~l~~~~ 421 (447)
.|.+ .+.++|+++.+.+++++..+..+.+...+|++|++++. +++.|||...+ ..++|++||+++++++..++
T Consensus 367 ~p~~--~~~~~~lv~~l~~~~~~~~g~~~~~~~~~ggtda~~~~----~~i~~Gp~~pG~~~~aH~~dE~v~i~~l~~~~ 440 (447)
T TIGR01887 367 KPLY--VPKDDPLVQTLMKVYEKQTGDEGTPVAIGGGTYARLME----NGVAFGALFPGEEDTMHQANEYIMIDDLLLAT 440 (447)
T ss_pred CCeE--ECCCCHHHHHHHHHHHHHhCCCCCeeEecchhhhhhCC----CcEEeCCCCCCCCCCccCCCcceeHHHHHHHH
Confidence 4554 36679999999999999866554556678889988763 46889965221 23689999999999999999
Q ss_pred HHHHHHH
Q 013216 422 DIYESII 428 (447)
Q Consensus 422 ~~~~~~l 428 (447)
++|.+++
T Consensus 441 ~i~~~~~ 447 (447)
T TIGR01887 441 AIYAEAI 447 (447)
T ss_pred HHHHHhC
Confidence 9998864
No 49
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=5e-45 Score=373.43 Aligned_cols=363 Identities=19% Similarity=0.236 Sum_probs=267.9
Q ss_pred hhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCC--CCCCeEEEeeccccCCC
Q 013216 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSN--PQLPSILLNSHTDVVPS 104 (447)
Q Consensus 27 ~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~--~~~~~ill~~H~Dtvp~ 104 (447)
.++++++|++|++|||. +++|.++++|+.++|+++|++++..+ ..|+++.++|+. ++.|+|+|.|||||||+
T Consensus 3 ~~~~~~~l~~l~~i~s~--s~~e~~~~~~l~~~l~~~G~~~~~~~----~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~ 76 (477)
T TIGR01893 3 PSRVFKYFEEISKIPRP--SKNEKEVSNFIVNWAKKLGLEVKQDE----VGNVLIRKPATPGYENHPPIVLQGHMDMVCE 76 (477)
T ss_pred HHHHHHHHHHHHcCCCC--CccHHHHHHHHHHHHHHcCCeEEEeC----CCeEEEEEcCCCCCCCCCeEEEEeeccccCC
Confidence 57899999999999986 47899999999999999999987543 349999997642 24588999999999999
Q ss_pred CC----CCCCcCCCceeeCCCCcEEecCcc---cchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHH
Q 013216 105 EP----SKWSHHPFGAHLDSQGNIFARGSQ---DMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFA 177 (447)
Q Consensus 105 ~~----~~W~~~Pf~~~~~~~g~l~GrG~~---D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~ 177 (447)
++ ..|+.+||++.++ ||++||||++ |||++++++|.+++. .+. ++++|.|+|++|||+|+ .|++.+.
T Consensus 77 ~~~~~~~~w~~~p~~~~~~-~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~~-~~~~i~~~~~~dEE~g~-~Gs~~l~ 150 (477)
T TIGR01893 77 KNEDSLHDFEKDPIELIID-GDWLKARGTTLGADNGIGVAMGLAILED---NNL-KHPPLELLFTVDEETGM-DGALGLD 150 (477)
T ss_pred CCCCCCCCCCCCCeEEEEe-CCEEEECCccccccccHHHHHHHHHHhc---CCC-CCCCEEEEEEeccccCc-hhhhhcC
Confidence 75 4799999999997 9999999996 999999999988764 333 56799999999999885 6999986
Q ss_pred ccccccCCceEEEEecCCc------CcCCc-ce----eEee--eeeeEEEEEEEee-cCCccCC-CCCC--CHHHHHHHH
Q 013216 178 DSHVFNSLNVGIVLDEGLA------STTED-YR----AFYA--ERCPWWLVIKARG-APGHGAK-LYDN--SAMENLFKS 240 (447)
Q Consensus 178 ~~~~~~~~~~~~~~d~g~~------~p~~~-~~----i~~~--~~G~~~~~i~v~G-~~~Hs~~-p~~g--nai~~~~~~ 240 (447)
... +. .++.++.|.... +|+.. .. +.+. ++|..+++|+++| +++|+|. |+.+ ||+..++++
T Consensus 151 ~~~-~~-~~~~~~~d~~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~ 228 (477)
T TIGR01893 151 ENW-LS-GKILINIDSEEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARV 228 (477)
T ss_pred hhh-cC-CcEEEEecCCCCCeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHH
Confidence 542 22 245555552100 12211 01 1111 5799999999999 9999986 7665 999999999
Q ss_pred HHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccC
Q 013216 241 IESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA 320 (447)
Q Consensus 241 i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~ 320 (447)
|..+.... .++++.+.+|. +.|+||++|++.+|+|..+....+.+.+.+++.++..
T Consensus 229 i~~l~~~~------------------~~~v~~~~gg~------~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~~~~~~~ 284 (477)
T TIGR01893 229 LNELKENL------------------NFRLSDIKGGS------KRNAIPREAKALIAIDENDVKLLENLVKNFQSKFKSE 284 (477)
T ss_pred HHhhhhcC------------------CeEEEEEeCCC------cccccCCceEEEEEEChhHHHHHHHHHHHHHHHHHHH
Confidence 99886531 34566666665 8888888888888888766666655555554443311
Q ss_pred C----CCceEeecccc----------------------------------------------------------------
Q 013216 321 S----RNMTFELGQFK---------------------------------------------------------------- 332 (447)
Q Consensus 321 ~----~~~~~~~~~~~---------------------------------------------------------------- 332 (447)
. .+++++..++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~t~n~g~i~~~~~~~~~~i~~R~~~~~ 364 (477)
T TIGR01893 285 YSELEPNITIEVSKRENSVKVFSENTTDKLINALNGLPNGVQSVSDEEPGLVESSLNLGVVKTKENKVIFTFLIRSSVES 364 (477)
T ss_pred hcccCCCeEEEEEECCCcccccCHHHHHHHHHHHHHCCccceeeccCCCCeEEeeeeEEEEEEcCCEEEEEEEeCCCCch
Confidence 1 11111100000
Q ss_pred ---------------ccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHc--CCCeEEE
Q 013216 333 ---------------QRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRER--GLPAIGF 395 (447)
Q Consensus 333 ---------------~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~--g~p~~~~ 395 (447)
....+......|++ .++.++|+++.+.+++++..+..+.+...+|++|+++|.+. ++|++.|
T Consensus 365 ~~~~i~~~i~~~~~~~~~~v~~~~~~~p~-~~~~d~plv~~l~~a~~~~~g~~~~~~~~~Ggtd~~~~~~~~~~i~~v~~ 443 (477)
T TIGR01893 365 DKDYVTEKIESIAKLAGARVEVSAGYPSW-QPDPQSNLLDTARKVYSEMFGEDPEVKVIHAGLECGIISSKIPDIDMISI 443 (477)
T ss_pred hHHHHHHHHHHHhhhcCeEEEEecCCCcc-cCCCCCHHHHHHHHHHHHHHCCCCeEEEeecCccHHHHHhhCCCceEEEe
Confidence 00001111233443 46788999999999999987655455677899999999876 7888999
Q ss_pred ccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHH
Q 013216 396 SPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 431 (447)
Q Consensus 396 gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l 431 (447)
||+.. +.|+|||+++++++.+++++|.+++..+
T Consensus 444 Gp~~~---~~H~~nE~i~i~~l~~~~~~~~~ll~~~ 476 (477)
T TIGR01893 444 GPNIY---DPHSPNERVSISSVEKVWDFLVKVLERL 476 (477)
T ss_pred CCCCC---CCCCCCceeeHHHHHHHHHHHHHHHHhc
Confidence 99764 6999999999999999999999998654
No 50
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=1.5e-45 Score=370.45 Aligned_cols=356 Identities=15% Similarity=0.178 Sum_probs=271.3
Q ss_pred hHHHHHHHhhhcccCCCC--------CCChhHHHHHHHHHHHHCCCc-eEEEeecCCCCeEEEEecCCCCC-CCeEEEee
Q 013216 28 DSIIERFRAYLQIDTSQP--------NPDYTNASKFILAQAEALSLE-SQTLEFAKNKPLILLKWPGSNPQ-LPSILLNS 97 (447)
Q Consensus 28 ~~~~~~l~~l~~ips~s~--------~~~e~~~~~~i~~~l~~~G~~-~~~~~~~~~~~nl~~~~~g~~~~-~~~ill~~ 97 (447)
+++++.+.+|++|+|.|. +..+++++++|.++|+++|++ ++. +. +..||+|.++|+.+. .|+|+|.+
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~~v~~-d~--~~gnv~~~~~~~~~~~~~~i~~~a 79 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQDAHY-DE--KNGYVIATIPSNTDKDVPTIGFLA 79 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCceEEE-cC--CceEEEEEecCCCCCCCCEEEEEE
Confidence 688999999999999872 113448999999999999997 553 42 245999999886431 38999999
Q ss_pred ccccCCCCC-C-------------------------CCCcCCCce------e-eCCCCcEEecCcccchhHHHHHHHHHH
Q 013216 98 HTDVVPSEP-S-------------------------KWSHHPFGA------H-LDSQGNIFARGSQDMKCVGMQYLEAIR 144 (447)
Q Consensus 98 H~Dtvp~~~-~-------------------------~W~~~Pf~~------~-~~~~g~l~GrG~~D~k~~~a~~l~a~~ 144 (447)
|||||+... . .|.++||+. . .+ ++.+|| +|||+++|++|.|++
T Consensus 80 HmDTv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~-g~~l~G---~D~KgglAa~l~A~~ 155 (410)
T TIGR01882 80 HVDTADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTD-GTTLLG---ADDKAGIAEIMTAAD 155 (410)
T ss_pred ecccCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcC-CCEeec---ccCHHHHHHHHHHHH
Confidence 999998522 2 689999994 3 44 679999 999999999999999
Q ss_pred HHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCc
Q 013216 145 RLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGH 224 (447)
Q Consensus 145 ~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~H 224 (447)
.|.+.+..++++|.|+|+++||+|. |++.+..+. + ..+++++++. +|++ .+.+..+|..+++|+++|+++|
T Consensus 156 ~L~e~~~~~~g~I~~~ft~dEE~g~--Ga~~l~~~~-~-~~~~~~~i~g---ep~g--~i~~~~~g~~~~~I~v~Gk~aH 226 (410)
T TIGR01882 156 YLINHPEIKHGTIRVAFTPDEEIGR--GAHKFDVKD-F-NADFAYTVDG---GPLG--ELEYETFSAAAAKITIQGNNVH 226 (410)
T ss_pred HHHhCCCCCCCCEEEEEECcccCCc--Ccchhhhhh-c-CccEEEEeCC---CCCC--eEEEccccceEEEEEEEEEecC
Confidence 9988643468899999999999863 888876433 2 3567777773 4655 3566667999999999999999
Q ss_pred cCCC-CCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCC
Q 013216 225 GAKL-YDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPP 302 (447)
Q Consensus 225 s~~p-~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~ 302 (447)
++.+ +.+ ||+..+..++..+...... ..++-+.+.+++| ..|.+|++|++.+|+|+.+
T Consensus 227 a~~~~~~g~nAi~~a~~~~~~l~~~~~~-------------~~t~~~~g~i~~g-------~i~giPd~a~l~~diR~~~ 286 (410)
T TIGR01882 227 PGTAKGKMINAAQIAIDLHNLLPEDDRP-------------EYTEGREGFFHLL-------SIDGTVEEAKLHYIIRDFE 286 (410)
T ss_pred cccChHHHHHHHHHHHHHHHhcCCcCCC-------------ccccceeEEEEEE-------eEEEecCEEEEEEEEecCC
Confidence 9976 456 8988888776655432110 0011112334444 5677999999999999999
Q ss_pred CCCHHHHHHHHHHHhccC--CCC---ceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecC
Q 013216 303 TTDAESLERRIVEEWAPA--SRN---MTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFP 377 (447)
Q Consensus 303 ~~~~~~i~~~i~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 377 (447)
.++.+.+.++|+++++.. ..+ ++++ +. ..+.+.......++++++.+.+++++++..+ ....+.
T Consensus 287 ~e~~e~i~~~i~~i~~~~~~~~g~~~v~~~---~~-------~~~~~~~~~~~~~~~lv~~~~~a~~~~G~~~-~~~~~~ 355 (410)
T TIGR01882 287 KENFQERKELMKRIVEKMNNEYGQDRIKLD---MN-------DQYYNMAEKIEKVMEIVDIAKQAMENLGIEP-KISPIR 355 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCceEEEE---EE-------eeecChhhccCCCHHHHHHHHHHHHHhCCCC-cccccc
Confidence 999999999999888632 222 2333 22 1222221245678999999999999877654 444567
Q ss_pred CCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 378 ASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 378 g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
|++|+++|...|+|++.|||+.. +.|++|||++++++.+++++|.+++...++
T Consensus 356 ggtDa~~~~~~Gip~~~~G~G~~---~aHt~dE~v~i~~l~~~~~~~~~li~~~~~ 408 (410)
T TIGR01882 356 GGTDGSQLSYMGLPTPNIFAGGE---NMHGRFEYISVDNMVKAVDVIVEIAKLNEE 408 (410)
T ss_pred eechHHHHHhCCCCCCeEcCCcc---cCcCCceEEEHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999864 599999999999999999999999987653
No 51
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=100.00 E-value=2.5e-43 Score=358.20 Aligned_cols=360 Identities=17% Similarity=0.207 Sum_probs=276.4
Q ss_pred CChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCC--CCCCeEEEeeccccC
Q 013216 25 KSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSN--PQLPSILLNSHTDVV 102 (447)
Q Consensus 25 ~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~--~~~~~ill~~H~Dtv 102 (447)
....+++++|++|++|||.| ++|.++++++.++++++|++++..+ ..|+++.+++.. .+.|+|+|.||||||
T Consensus 7 ~~~~~~~~~l~~Lv~ips~S--~~e~~~~~~l~~~~~~~G~~~~~d~----~gnvi~~~~~~~g~~~~~~v~l~gH~DtV 80 (485)
T PRK15026 7 LSPQPLWDIFAKICSIPHPS--YHEEQLAEYIVGWAKEKGFHVERDQ----VGNILIRKPATAGMENRKPVVLQAHLDMV 80 (485)
T ss_pred cCHHHHHHHHHHHhCCCCCC--CCHHHHHHHHHHHHHhCCCEEEEEe----cCeEEEEEcCCCCCCCCCEEEEEeeeccc
Confidence 35678999999999999974 7888999999999999999987543 238999876431 235889999999999
Q ss_pred CCCC----CCCCcCCCceeeCCCCcEEecCc---ccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHH
Q 013216 103 PSEP----SKWSHHPFGAHLDSQGNIFARGS---QDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEK 175 (447)
Q Consensus 103 p~~~----~~W~~~Pf~~~~~~~g~l~GrG~---~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~ 175 (447)
|+++ .+|+++||++.++ ||++||||+ +|||++++++|.++ .+.+. .+++|.|+|++|||+|+ .|++.
T Consensus 81 ~~~~~~~~~~w~~~P~~~~i~-~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~-~~~~i~~l~t~dEE~G~-~ga~~ 154 (485)
T PRK15026 81 PQKNNDTVHDFTKDPIQPYID-GEWVKARGTTLGADNGIGMASALAVL---ADENV-VHGPLEVLLTMTEEAGM-DGAFG 154 (485)
T ss_pred CCCCCCccccCCCCCceEEEc-CCEEEeCCccccCccHHHHHHHHHHH---HhCCC-CCCCEEEEEEcccccCc-HhHHH
Confidence 9975 3799999999997 999999999 59999999988775 44454 37899999999999986 79999
Q ss_pred HHccccccCCceEEEEecCCcCcCCcceeEeee------------------eeeEEEEEEEee-cCCccCC-CCCC--CH
Q 013216 176 FADSHVFNSLNVGIVLDEGLASTTEDYRAFYAE------------------RCPWWLVIKARG-APGHGAK-LYDN--SA 233 (447)
Q Consensus 176 ~~~~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~------------------~G~~~~~i~v~G-~~~Hs~~-p~~g--na 233 (447)
+.. ..+ ..++.+++|.. ....++.+. +|..+++|+++| ++||||. |+.| ||
T Consensus 155 l~~-~~~-~~~~~i~~e~~-----~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nA 227 (485)
T PRK15026 155 LQS-NWL-QADILINTDSE-----EEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNA 227 (485)
T ss_pred hhh-ccC-CcCEEEEeCCC-----CCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccH
Confidence 854 333 45888998753 112232222 577889999999 9999995 7776 99
Q ss_pred HHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHH
Q 013216 234 MENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRI 313 (447)
Q Consensus 234 i~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i 313 (447)
+..++++|..+.. .++++++.++||+ +.|+||++|++.+++|.......+.+.+.+
T Consensus 228 i~~la~~l~~~~~------------------~~~~~v~~i~GG~------~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~ 283 (485)
T PRK15026 228 NKLLVRFLAGHAE------------------ELDLRLIDFNGGT------LRNAIPREAFATIAVAADKVDALKSLVNTY 283 (485)
T ss_pred HHHHHHHHHHhHh------------------hCCeEEEEEeCCC------ccCCCCCCcEEEEEEChhHHHHHHHHHHHH
Confidence 9999999887531 1589999999998 999999999999999987655555555544
Q ss_pred HHHhcc----CCCCceEee----------------------------------------------cc-----------cc
Q 013216 314 VEEWAP----ASRNMTFEL----------------------------------------------GQ-----------FK 332 (447)
Q Consensus 314 ~~~~~~----~~~~~~~~~----------------------------------------------~~-----------~~ 332 (447)
++.+.. ...++.++. +. +.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Gv~~~s~~~~g~v~~S~Nlg~v~~~~~~~~i~~~ 363 (485)
T PRK15026 284 QEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCL 363 (485)
T ss_pred HHHHHHHhcccCCCeEEEEEEccccccccCHHHHHHHHHHHHHCCcccEEeccCCCCeEEeeeEEEEEEEeCCEEEEEEE
Confidence 333320 001111100 00 00
Q ss_pred ccc----------------------cccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHc--
Q 013216 333 QRA----------------------SLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRER-- 388 (447)
Q Consensus 333 ~~~----------------------~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~-- 388 (447)
.+. .+.....+|++ ..++++|+++.+.++++++.+..+.+...++++|++.|.+.
T Consensus 364 ~Rs~~~~~~~~i~~~i~~~~~~~g~~~~~~~~~p~w-~~~~ds~lv~~l~~~y~e~~G~~~~~~~ihaglEcG~~~~~~p 442 (485)
T PRK15026 364 IRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGW-QPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYP 442 (485)
T ss_pred ecCCCchHHHHHHHHHHHHHHHcCcEEEEeCCCCCC-CCCCCCHHHHHHHHHHHHHHCCCCeEEEEEEEehHHHHHhhCC
Confidence 000 00123456666 56778999999999999998776566778899999999865
Q ss_pred CCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHH
Q 013216 389 GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 431 (447)
Q Consensus 389 g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l 431 (447)
++|++.|||... .+|+|||+++++++...++++..++..+
T Consensus 443 ~i~~VsfGP~~~---~~HspdE~v~I~s~~~~~~~l~~~l~~~ 482 (485)
T PRK15026 443 EMDMVSIGPTIT---GPHSPDEQVHIESVGHYWTLLTELLKEI 482 (485)
T ss_pred CCCEEEECCCCC---CCCCCCcEEEhHHHHHHHHHHHHHHHhh
Confidence 899999999976 4899999999999988888888888776
No 52
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=6.4e-44 Score=353.82 Aligned_cols=346 Identities=18% Similarity=0.213 Sum_probs=269.1
Q ss_pred HHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCCCCCCC
Q 013216 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWS 110 (447)
Q Consensus 31 ~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~~~W~ 110 (447)
.+++++|++|||+| ++|.+++++|.++|+++|++++... .+..|+++++++..+ .|+|+|.|||||||+++ |+
T Consensus 2 ~~~~~~L~~ips~s--~~E~~~a~~l~~~l~~~g~~~~~~~--~~~~~vva~~~~~~~-~~~i~l~gH~DtVp~~~--~~ 74 (363)
T TIGR01891 2 TDIRRHLHEHPELS--FEEFKTSSLIAEALESLGIEVRRGV--GGATGVVATIGGGKP-GPVVALRADMDALPIQE--QT 74 (363)
T ss_pred hHHHHHHhcCCCCC--CchHHHHHHHHHHHHHcCCceEecC--CCCcEEEEEEeCCCC-CCEEEEEeccCCCCccc--cc
Confidence 57899999999986 7899999999999999999987522 245799999876433 48999999999999864 67
Q ss_pred cCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCceEEE
Q 013216 111 HHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIV 190 (447)
Q Consensus 111 ~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~ 190 (447)
.+||.+. + ||++||||+ ++++++++.|++.|++.+..++++|.|+|++|||.+ .|++.+++++.+++.|.+++
T Consensus 75 ~~pf~~~-~-~g~l~g~G~---~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~--~G~~~~~~~~~~~~~d~~i~ 147 (363)
T TIGR01891 75 DLPYKST-N-PGVMHACGH---DLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGG--GGATKMIEDGVLDDVDAILG 147 (363)
T ss_pred CCCcccC-C-CCceecCcC---HHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCc--chHHHHHHCCCCCCcCEEEE
Confidence 7999986 5 899999997 478899999999988876667899999999999985 59999998876766788888
Q ss_pred EecCCcCcCCc--ceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcce
Q 013216 191 LDEGLASTTED--YRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVS 267 (447)
Q Consensus 191 ~d~g~~~p~~~--~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t 267 (447)
++.....+.+. .....+++|..+++++++|+++|++.|+.| ||+..+++++.+++.+..... .....++
T Consensus 148 ~e~~~~~~~~~~~~~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~--------~~~~~~~ 219 (363)
T TIGR01891 148 LHPDPSIPAGTVGLRPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNV--------DPSRPAV 219 (363)
T ss_pred ECCCCCCCCeEEEECCCcceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccC--------CCCCCcE
Confidence 76422222221 112346689999999999999999999988 999999999999976532110 0112358
Q ss_pred eeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccC--CCCceEeeccccccccccccCCCCc
Q 013216 268 VNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFELGQFKQRASLHDKFGRPI 345 (447)
Q Consensus 268 ~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~ 345 (447)
++++.+++|. ..|+||++|++.+|+|+.|.++.+++.++|+++++.. ..+.+++ ++. ...+|.
T Consensus 220 ~~i~~i~gG~------~~nvvP~~~~~~~diR~~~~~~~e~~~~~i~~~~~~~~~~~~~~ve---~~~------~~~~p~ 284 (363)
T TIGR01891 220 VTVGIIEAGG------APNVIPDKASMSGTVRSLDPEVRDQIIDRIERIVEGAAAMYGAKVE---LNY------DRGLPA 284 (363)
T ss_pred EEEEEEEcCC------CCcEECCeeEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCeEE---EEE------ecCCCC
Confidence 9999999886 8999999999999999999999999999999888632 2345555 442 123443
Q ss_pred ccccCCCChHHHHHHHHHHHhcCC-C--CCceecCCCcchHHHHHcCCCe-EEEccCCCCC----CCCCCCCccccHHHH
Q 013216 346 LTATDSSNPWWNLLEEAVRKANGK-L--GKPEIFPASTDARYFRERGLPA-IGFSPMANTP----ILLHDHNEFLNQAEY 417 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~a~~~~~~~-~--~~~~~~~g~~D~~~~~~~g~p~-~~~gp~~~~~----~~~H~~~E~v~~~~l 417 (447)
...++++++.++++++++.+. . ..+..++|++|+++++.. +|+ +.|.|..... ...|++++.++.+-+
T Consensus 285 ---~~~~~~l~~~l~~a~~~~~g~~~~~~~~~~~~gg~Da~~~~~~-~P~~~~f~~~~~~~~~~~~~~h~~~~~~~~~~~ 360 (363)
T TIGR01891 285 ---VTNDPALTQILKEVARHVVGPENVAEDPEVTMGSEDFAYYSQK-VPGAFFFLGIGNEGTGLSHPLHHPRFDIDEEAL 360 (363)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCccceeccCCCCccccCHHHHHHh-CCeeEEEEecCCCCCCCCCCCCCCCCcCChHHh
Confidence 235789999999999996442 1 123356799999999986 786 5677776422 468999988887655
No 53
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.1e-43 Score=356.16 Aligned_cols=353 Identities=17% Similarity=0.217 Sum_probs=269.7
Q ss_pred CCChhHHHHHHHhhhcccCCCC--------CCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEE
Q 013216 24 AKSDDSIIERFRAYLQIDTSQP--------NPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILL 95 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~--------~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill 95 (447)
+.+.++++++|++|++|||.++ +++|.++++||.++|+++|++++.. +..|++++++|.++..|+|+|
T Consensus 6 ~~~~~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~~~~~~----~~~n~~a~~~g~~~~~~~l~l 81 (412)
T PRK12893 6 RINGERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGLTVSVD----AIGNLFGRRAGTDPDAPPVLI 81 (412)
T ss_pred ccCHHHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCCEEEEc----CCCcEEEEeCCCCCCCCEEEE
Confidence 3457899999999999998643 3348899999999999999998752 345999999876543589999
Q ss_pred eeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccC----ccc
Q 013216 96 NSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG----GHD 171 (447)
Q Consensus 96 ~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g----~~~ 171 (447)
.||+||||++ |. .|+|++++++|.|++.|.+.+..++++|.|+|++|||+| ++.
T Consensus 82 ~~H~DtVp~~----------------g~------~dgk~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~ 139 (412)
T PRK12893 82 GSHLDTQPTG----------------GR------FDGALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAML 139 (412)
T ss_pred EecccCCCCC----------------Cc------ccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccc
Confidence 9999999964 22 355789999999999999988888999999999999986 236
Q ss_pred CHHHHHcccccc------C-------------------------CceEEEEe--cCCc-Cc-CCcceeEeeeeeeEEEEE
Q 013216 172 GAEKFADSHVFN------S-------------------------LNVGIVLD--EGLA-ST-TEDYRAFYAERCPWWLVI 216 (447)
Q Consensus 172 G~~~~~~~~~~~------~-------------------------~~~~~~~d--~g~~-~p-~~~~~i~~~~~G~~~~~i 216 (447)
|++.+......+ . .+.++-++ .|.. ++ .....++.++||..+++|
T Consensus 140 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~kG~~~~~i 219 (412)
T PRK12893 140 GSGVFTGALPLDDALARRDADGITLGEALARIGYRGTARVGRRAVDAYLELHIEQGPVLEAEGLPIGVVTGIQGIRWLEV 219 (412)
T ss_pred cHHHHhCcCChHHHHhccCCCCCCHHHHHHHcCCCcccccccCCccEEEEEEeccCHHHHHCCCcEEEEeeecccEEEEE
Confidence 888776542100 0 01111111 1100 01 113568899999999999
Q ss_pred EEeecCCccCC-CC-CC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecC-CCCCCCccccccCCce
Q 013216 217 KARGAPGHGAK-LY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAG-TPSPNGFVMNLQPSEA 292 (447)
Q Consensus 217 ~v~G~~~Hs~~-p~-~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g-~~~~~~~~~n~iP~~~ 292 (447)
+++|+++|+|. |+ .| |||..+++++..|+.+.... ...++++++.+++| . ..|+||++|
T Consensus 220 ~v~G~~aHas~~p~~~G~NAI~~a~~~i~~l~~~~~~~-----------~~~~~~~vg~i~ggg~------~~NvVP~~a 282 (412)
T PRK12893 220 TVEGQAAHAGTTPMAMRRDALVAAARIILAVERIAAAL-----------APDGVATVGRLRVEPN------SRNVIPGKV 282 (412)
T ss_pred EEEEECCCcCCCcchhccCHHHHHHHHHHHHHHHHHhc-----------CCCceEEEEEEEeeCC------CceEECCee
Confidence 99999999886 74 67 99999999999997753211 11357888888864 4 899999999
Q ss_pred EEEEeeecCCCCCHHHHHHHHHHHhccC--CCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCC
Q 013216 293 EAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKL 370 (447)
Q Consensus 293 ~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~ 370 (447)
++.+|+|+.|.++.+++.++|+++++.. .++++++ +.. ....|+ ...++++++.++++.++++...
T Consensus 283 ~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~v~---~~~------~~~~~~---~~~d~~l~~~l~~~~~~~g~~~ 350 (412)
T PRK12893 283 VFTVDIRHPDDARLDAMEAALRAACAKIAAARGVQVT---VET------VWDFPP---VPFDPALVALVEAAAEALGLSH 350 (412)
T ss_pred EEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEE---EEE------EecCCC---cCCCHHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999888632 2445555 331 122332 3446889999999998876543
Q ss_pred CCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhh
Q 013216 371 GKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASY 434 (447)
Q Consensus 371 ~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~~ 434 (447)
.+....|++|+++|.+.+++++.|||+... ..|++||+++++++.+++++|..++..+++.
T Consensus 351 -~~~~~~g~tD~~~~~~~~p~~v~~gp~~~~--~~Hs~dE~v~i~~l~~~~~i~~~ll~~~~~~ 411 (412)
T PRK12893 351 -MRMVSGAGHDAMFLARVAPAAMIFVPCRGG--ISHNEAEDTEPADLAAGANVLLHAVLELAGR 411 (412)
T ss_pred -cccCCccHHHHHHHHhhCCEEEEEeecCCC--CCCCccccCCHHHHHHHHHHHHHHHHHhhcc
Confidence 444567889999999875457899998653 6899999999999999999999999988653
No 54
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.7e-43 Score=355.40 Aligned_cols=349 Identities=17% Similarity=0.160 Sum_probs=268.4
Q ss_pred CCChhHHHHHHHhhhcccC-------CCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEe
Q 013216 24 AKSDDSIIERFRAYLQIDT-------SQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLN 96 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips-------~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~ 96 (447)
..+.+++++++++|++|+| .|.+++|.++++||.++|+++|++++.. +++|++++++|.+++ |+|+|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~----~~~nl~a~~~g~~~~-~~l~l~ 80 (412)
T PRK12892 6 RIDGQRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAGLAVRID----GIGNVFGRLPGPGPG-PALLVG 80 (412)
T ss_pred cccHHHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcCCEEEEc----CCCcEEEEecCCCCC-CeEEEE
Confidence 3456789999999999988 3345678899999999999999998752 456999999886554 889999
Q ss_pred eccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccC----cccC
Q 013216 97 SHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG----GHDG 172 (447)
Q Consensus 97 ~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g----~~~G 172 (447)
||+||||++ |++|| |++++++|.|++.|.+.+..++++|.|++++|||.+ +..|
T Consensus 81 gH~DtVp~~----------------g~~dg------~~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G 138 (412)
T PRK12892 81 SHLDSQNLG----------------GRYDG------ALGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLG 138 (412)
T ss_pred ccccCCCCC----------------Ccccc------hHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCcccc
Confidence 999999974 34444 459999999999999999889999999999999984 4569
Q ss_pred HHHHHccccc----------cC-------------CceEEE-------------EecCCc-CcCC-cceeEeeeeeeEEE
Q 013216 173 AEKFADSHVF----------NS-------------LNVGIV-------------LDEGLA-STTE-DYRAFYAERCPWWL 214 (447)
Q Consensus 173 ~~~~~~~~~~----------~~-------------~~~~~~-------------~d~g~~-~p~~-~~~i~~~~~G~~~~ 214 (447)
++.++++... .. .|..++ .+.|.. +|++ ...++.++||..++
T Consensus 139 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~ep~~~~~~~e~~~~~g~~~e~~~~~~~i~~~~kG~~~~ 218 (412)
T PRK12892 139 SRAYAGRLDPADALAARCRSDGVPLRDALAAAGLAGRPRPAADRARPKGYLEAHIEQGPVLEQAGLPVGVVTGIVGIWQY 218 (412)
T ss_pred HHHHHcCCCHHHHHhCccCCCCcCHHHHHHHcCCChhhcccccccCccEEEEEEeccCHhHhhCCCcEEEEEEeccceEE
Confidence 9988753110 00 011111 111110 1212 14689999999999
Q ss_pred EEEEeecCCccCC-CC-CC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecC-CCCCCCccccccCC
Q 013216 215 VIKARGAPGHGAK-LY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAG-TPSPNGFVMNLQPS 290 (447)
Q Consensus 215 ~i~v~G~~~Hs~~-p~-~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g-~~~~~~~~~n~iP~ 290 (447)
+|+++|+++|++. |+ .+ ||+..+++++..|+.+.... . ..++++++.+++| . ..|+||+
T Consensus 219 ~i~v~G~~aHa~~~p~~~g~nAi~~a~~~i~~l~~~~~~~----------~-~~~~~~vg~i~gg~~------~~NvIP~ 281 (412)
T PRK12892 219 RITVTGEAGHAGTTPMALRRDAGLAAAEMIAAIDEHFPRV----------C-GPAVVTVGRVALDPG------SPSIIPG 281 (412)
T ss_pred EEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc----------C-CCcEEEEEEEEecCC------CCeEECC
Confidence 9999999999876 54 56 99999999999997642210 1 1258899999975 4 8999999
Q ss_pred ceEEEEeeecCCCCCHHHHHHHHHHHhcc--CCCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcC
Q 013216 291 EAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANG 368 (447)
Q Consensus 291 ~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~ 368 (447)
+|++.+|+|+.|.++.+++.++|+++++. ..++++++ +.. ...+|+ ...++++++.+++++++.+.
T Consensus 282 ~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~e---~~~------~~~~~~---~~~d~~lv~~~~~a~~~~g~ 349 (412)
T PRK12892 282 RVEFSFDARHPSPPVLQRLVALLEALCREIARRRGCRVS---VDR------IAEYAP---APCDAALVDALRAAAEAAGG 349 (412)
T ss_pred eEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEE---EEE------EecCCC---cCCCHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999988873 22445555 431 122333 34568999999999999554
Q ss_pred CCCCceecCCCcchHHHHHcCCC-eEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013216 369 KLGKPEIFPASTDARYFRERGLP-AIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 432 (447)
Q Consensus 369 ~~~~~~~~~g~~D~~~~~~~g~p-~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~ 432 (447)
.. .+...+|++|+++|++. +| ++.|||+... ..|++||+++++++.+++++|..++..++
T Consensus 350 ~~-~~~~~~g~tDa~~~~~~-ip~~~~~gp~~~~--~~H~~~E~v~i~~l~~~~~il~~~l~~~~ 410 (412)
T PRK12892 350 PY-LEMPSGAGHDAQNMARI-APSAMLFVPSKGG--ISHNPAEDTSPADLAQGARVLADTLRRLA 410 (412)
T ss_pred Cc-cccCcchHHHHHHHHhH-CCEEEEEeccCCC--CCCCCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 43 44556789999999887 77 4679998653 68999999999999999999999998775
No 55
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=8.1e-43 Score=351.54 Aligned_cols=348 Identities=20% Similarity=0.241 Sum_probs=266.7
Q ss_pred ChhHHHHHHHhhhcc-cCC-------CCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEee
Q 013216 26 SDDSIIERFRAYLQI-DTS-------QPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNS 97 (447)
Q Consensus 26 ~~~~~~~~l~~l~~i-ps~-------s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~ 97 (447)
+.+++++.+++|++| +.. |.+++|.++++||.++|+++|++++.. +++||+++++|..+..|+|+|.|
T Consensus 5 ~~~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g~~~~~~----~~~nl~a~~~g~~~~~~~l~l~g 80 (413)
T PRK09290 5 DAERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAGLTVRVD----AVGNLFGRLEGRDPDAPAVLTGS 80 (413)
T ss_pred CHHHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcCCEEEEc----CCCcEEEEecCCCCCCCEEEEec
Confidence 468899999999999 422 235678999999999999999998752 45699999976543358899999
Q ss_pred ccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccC----cccCH
Q 013216 98 HTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG----GHDGA 173 (447)
Q Consensus 98 H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g----~~~G~ 173 (447)
||||||++ |..|+|+++|+++.|++.|.+.+..++++|.|++++|||.| +..|+
T Consensus 81 H~DtVp~~----------------------g~~d~k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~ 138 (413)
T PRK09290 81 HLDTVPNG----------------------GRFDGPLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGS 138 (413)
T ss_pred CccCCCCC----------------------CCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccH
Confidence 99999974 12477999999999999999988888899999999999984 34688
Q ss_pred HHHHcccc-----------------------ccCCceEEEE---------------ecC-CcCcCC-cceeEeeeeeeEE
Q 013216 174 EKFADSHV-----------------------FNSLNVGIVL---------------DEG-LASTTE-DYRAFYAERCPWW 213 (447)
Q Consensus 174 ~~~~~~~~-----------------------~~~~~~~~~~---------------d~g-~~~p~~-~~~i~~~~~G~~~ 213 (447)
+.+++... + +.|++++. +.| ..+|+. ...++.++||..+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~~~~i~~~~kG~~~ 217 (413)
T PRK09290 139 RVFTGALTPEDALALRDADGVSFAEALAAIGY-DGDEAVGAARARRDIKAFVELHIEQGPVLEAEGLPIGVVTGIVGQRR 217 (413)
T ss_pred HHHHcccCHHHHHhccCCCCCCHHHHHHHcCC-ChhhccccccCCCCccEEEEEEeccCHHHHHCCCcEEEEeeeeccEE
Confidence 87764311 1 11322211 000 012332 2468899999999
Q ss_pred EEEEEeecCCccC-CC-CCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecC-CCCCCCccccccC
Q 013216 214 LVIKARGAPGHGA-KL-YDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAG-TPSPNGFVMNLQP 289 (447)
Q Consensus 214 ~~i~v~G~~~Hs~-~p-~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g-~~~~~~~~~n~iP 289 (447)
++|+++|+++|++ .| +.| |||..+++++..|+.+.... ....+++++.+++| . +.|+||
T Consensus 218 ~~i~v~Gk~aHas~~P~~~g~NAI~~~~~~i~~l~~l~~~~-----------~~~~~~~~g~i~~g~~------~~NvIP 280 (413)
T PRK09290 218 YRVTFTGEANHAGTTPMALRRDALLAAAEIILAVERIAAAH-----------GPDLVATVGRLEVKPN------SVNVIP 280 (413)
T ss_pred EEEEEEEECCCCCCCCchhccCHHHHHHHHHHHHHHHHHhc-----------CCCeEEEEEEEEEcCC------CCeEEC
Confidence 9999999999988 58 467 99999999999997653210 11247888888864 3 889999
Q ss_pred CceEEEEeeecCCCCCHHHHHHHHHHHhccC--CCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhc
Q 013216 290 SEAEAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKAN 367 (447)
Q Consensus 290 ~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~ 367 (447)
++|++.+|+|+.|.++.+++.++|+++++.. ..+++++ +.. ...+|+ ...++++++.+.+++++.+
T Consensus 281 ~~a~~~~diR~~p~e~~e~v~~~i~~~~~~~~~~~~~~~e---~~~------~~~~~~---~~~d~~lv~~l~~a~~~~g 348 (413)
T PRK09290 281 GEVTFTLDIRHPDDAVLDALVAELRAAAEAIAARRGVEVE---IEL------ISRRPP---VPFDPGLVAALEEAAERLG 348 (413)
T ss_pred CEEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEE---EEE------EecCCC---ccCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999888732 2345555 331 123333 3457899999999998875
Q ss_pred CCCCCceecCCCcchHHHHHcCCCe-EEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 368 GKLGKPEIFPASTDARYFRERGLPA-IGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 368 ~~~~~~~~~~g~~D~~~~~~~g~p~-~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
... .+....|++|+++|.. ++|+ +.|||+... ..|++||+++++++.+++++|+.++..+++
T Consensus 349 ~~~-~~~~~~g~tDa~~~~~-~iP~~~~~gp~~~~--~~H~~dE~v~i~~l~~~~~v~~~~l~~l~~ 411 (413)
T PRK09290 349 LSY-RRLPSGAGHDAQILAA-VVPTAMIFVPSVGG--ISHNPAEFTSPEDCAAGANVLLHALLELAE 411 (413)
T ss_pred CCc-cccCCccchHHHHHhc-cCCEEEEEeccCCC--CCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 433 4445678999999964 6997 678887653 589999999999999999999999998864
No 56
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-42 Score=320.46 Aligned_cols=397 Identities=20% Similarity=0.345 Sum_probs=306.5
Q ss_pred HHhhhcCCCCChhHHHHHHHhhhcccCCCCCC----ChhHHHHHHHHHHHHCCCceEEEeecC----------CCCeEEE
Q 013216 16 QLIIFSSPAKSDDSIIERFRAYLQIDTSQPNP----DYTNASKFILAQAEALSLESQTLEFAK----------NKPLILL 81 (447)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~~----~e~~~~~~i~~~l~~~G~~~~~~~~~~----------~~~nl~~ 81 (447)
++-.|++.+.+.+++++.|+++++|+|+|..+ ...++++|++++|.++|-.++..+... ..|-|++
T Consensus 4 l~~~fq~id~~~de~~~~L~e~v~iqsvs~dp~~r~~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvvl~ 83 (473)
T KOG2276|consen 4 LTKVFQSIDLNKDEFINTLREAVAIQSVSADPTKRLEVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVVLG 83 (473)
T ss_pred HHHHHHHhhccHHHHHHHHHHHhcccccccCccccHHHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhhhh
Confidence 34567788999999999999999999998544 356889999999999998777666431 1223344
Q ss_pred EecCCCCCCCeEEEeeccccCCCC-CCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEE
Q 013216 82 KWPGSNPQLPSILLNSHTDVVPSE-PSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLS 160 (447)
Q Consensus 82 ~~~g~~~~~~~ill~~H~Dtvp~~-~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~ 160 (447)
++ |++|++++++++||||++|.. +++|..+||+.+++ ||+|||||++|+||++++.+.|++++.+.|+.++.||+|+
T Consensus 84 ~~-Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~-~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~ 161 (473)
T KOG2276|consen 84 VL-GSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTED-DGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFV 161 (473)
T ss_pred cc-cCCCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEE-CCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEE
Confidence 43 888999999999999999998 59999999999998 9999999999999999999999999999999999999999
Q ss_pred eecCcccCcccCHHHHHccc---cccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEee--cCCccCCCCCC---C
Q 013216 161 FVPDEEIGGHDGAEKFADSH---VFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARG--APGHGAKLYDN---S 232 (447)
Q Consensus 161 ~~~~EE~g~~~G~~~~~~~~---~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G--~~~Hs~~p~~g---n 232 (447)
|.+-||.|+ .|...++++. .+.++|+.++.|. .+--+..+.+.+|.||...+.++|.| +..|||. +.| .
T Consensus 162 ~EgmEEsgS-~~L~~l~~~~kD~~~~~vD~vciSdn-yWlg~kkPcltyGlRG~~yf~i~v~g~~~DlHSGv-fGG~~hE 238 (473)
T KOG2276|consen 162 FEGMEESGS-EGLDELIEKEKDKFFKDVDFVCISDN-YWLGTKKPCLTYGLRGVIYFQIEVEGPSKDLHSGV-FGGVVHE 238 (473)
T ss_pred EEechhccC-ccHHHHHHHHhhhhhccCCEEEeeCc-eeccCCCcccccccccceeEEEEEeeccccccccc-ccchhHH
Confidence 999999998 6888888753 3557887777663 33234557788999999999999999 6789986 334 7
Q ss_pred HHHHHHHHHHHHHhchhh----------------h---HHHHH-------h--c------------cccCCCcceeeeee
Q 013216 233 AMENLFKSIESVRRFRAS----------------Q---FDLVK-------A--G------------LKAEGEVVSVNMAF 272 (447)
Q Consensus 233 ai~~~~~~i~~l~~~~~~----------------~---~~~~~-------~--~------------~~~~~~~~t~~~~~ 272 (447)
|+..|..++..|...+.+ + ++.+. + + +......++..+..
T Consensus 239 ~m~dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWryPSLsihg 318 (473)
T KOG2276|consen 239 AMNDLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRYPSLSIHG 318 (473)
T ss_pred HHHHHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhcccCccceec
Confidence 888888888887653321 0 00000 0 0 00112356777888
Q ss_pred eecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc-----C-CCCceEeeccccccccccccCCCCcc
Q 013216 273 LKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP-----A-SRNMTFELGQFKQRASLHDKFGRPIL 346 (447)
Q Consensus 273 i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~p~~ 346 (447)
|+|.- ++.++..+||.++.-.|++|++|.++.+.+.+.+.++++. . ...++++ +. ..+.|..
T Consensus 319 IeGaF--s~pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~yl~~~f~~~nS~N~l~~~---~~-------~~~~~Wv 386 (473)
T KOG2276|consen 319 IEGAF--SGPGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTRYLEKVFAELNSPNKLKVS---MG-------HAGAPWV 386 (473)
T ss_pred cccee--eCCCceEEeehhheeeeEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEe---ec-------CCCCcee
Confidence 77543 4445889999999999999999999999998888776652 1 1234444 32 3445543
Q ss_pred cccCCCChHHHHHHHHHHHhcCCCCCceecCCCc--chHHHHHc-CCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHH
Q 013216 347 TATDSSNPWWNLLEEAVRKANGKLGKPEIFPAST--DARYFRER-GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDI 423 (447)
Q Consensus 347 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~--D~~~~~~~-g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~ 423 (447)
.+++++-+.++++|++.+++.. ......|+| -..-|+.. +.+++.+ |.+..+.+.|+.||++++..+.++.++
T Consensus 387 --~d~~~~~y~a~krA~~~v~gve-Pd~~ReGgSIPvt~tfQ~~~~~~V~ll-P~G~~dD~aHsqNEkl~i~N~~~G~k~ 462 (473)
T KOG2276|consen 387 --SDPDDPHYLALKRAIETVYGVE-PDFTREGGSIPVTLTFQDITGKSVLLL-PYGASDDGAHSQNEKLNITNYVEGTKV 462 (473)
T ss_pred --cCCCchhHHHHHHHHHHhhCCC-CCccccCCccceehHHHHHhCCCeEEe-cccccccchhhhcccccHHHHhhhHHH
Confidence 6778999999999999998765 223334555 45667776 7777766 444334589999999999999999999
Q ss_pred HHHHHHHHHh
Q 013216 424 YESIIKAYAS 433 (447)
Q Consensus 424 ~~~~l~~l~~ 433 (447)
++.++.++++
T Consensus 463 l~ay~~el~~ 472 (473)
T KOG2276|consen 463 LAAYISELAQ 472 (473)
T ss_pred HHHHHHHHhc
Confidence 9999998864
No 57
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.5e-42 Score=347.75 Aligned_cols=350 Identities=17% Similarity=0.205 Sum_probs=266.7
Q ss_pred hhHHHHHHHhhhcccC-C-------CCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeec
Q 013216 27 DDSIIERFRAYLQIDT-S-------QPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSH 98 (447)
Q Consensus 27 ~~~~~~~l~~l~~ips-~-------s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H 98 (447)
..++++.+..|-+|.+ . +.+++|.++++||.++|+++|++++.. ...||++.++|.+++.|+|+|.||
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~l~~~G~~v~~~----~~gNl~a~~~g~~~~~~~l~~~~H 84 (414)
T PRK12891 9 GERLWASLERMAQIGATPKGGVCRLALTDGDREARDLFVAWARDAGCTVRVD----AMGNLFARRAGRDPDAAPVMTGSH 84 (414)
T ss_pred HHHHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEC----CCCCEEEEecCCCCCCCeEEEEec
Confidence 4589999999999842 1 235678999999999999999998864 345999999886555689999999
Q ss_pred cccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCc----ccCHH
Q 013216 99 TDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGG----HDGAE 174 (447)
Q Consensus 99 ~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~----~~G~~ 174 (447)
|||||++ |..|||++++++|.|++.|++.+..++++|.|++++|||.++ +.|++
T Consensus 85 ~DtVp~g----------------------g~~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~ 142 (414)
T PRK12891 85 ADSQPTG----------------------GRYDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSG 142 (414)
T ss_pred ccCCCCC----------------------ccccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHH
Confidence 9999974 235999999999999999999999999999999999999852 24665
Q ss_pred HHH------------------------cccccc-------CCceEE--EEecCCc-CcCC-cceeEeeeeeeEEEEEEEe
Q 013216 175 KFA------------------------DSHVFN-------SLNVGI--VLDEGLA-STTE-DYRAFYAERCPWWLVIKAR 219 (447)
Q Consensus 175 ~~~------------------------~~~~~~-------~~~~~~--~~d~g~~-~p~~-~~~i~~~~~G~~~~~i~v~ 219 (447)
.+. +.+... ..+..+ ..+.|.. ++++ ...++.+++|..+++|+++
T Consensus 143 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~e~h~e~g~vle~~~~~~~iv~~~kG~~~~~v~v~ 222 (414)
T PRK12891 143 VFFGVYPLEYLLSRRDDTGRTLGEHLARIGYAGAEPVGGYPVHAAYELHIEQGAILERAGKTIGVVTAGQGQRWYEVTLT 222 (414)
T ss_pred HHhCCCCHHHHHhccCCCCCCHHHHHHHCCCCcccccccCCCCEEEEEEeCCCHHHHHCCCcEEEEeeccCcEEEEEEEE
Confidence 442 211100 001112 2221211 1111 3578999999999999999
Q ss_pred ecCCccC-CCC-CC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEE
Q 013216 220 GAPGHGA-KLY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGF 296 (447)
Q Consensus 220 G~~~Hs~-~p~-~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~ 296 (447)
|+++|+| .|+ .+ |||..++++|..|+.+... .....+++++.|++|. .+.|+||++|++.+
T Consensus 223 Gk~aHa~~~P~~~g~nAI~~aa~~i~~l~~~~~~-----------~~~~~t~~vg~I~gG~-----~~~NvVP~~~~~~~ 286 (414)
T PRK12891 223 GVDAHAGTTPMAFRRDALVGAARMIAFLDALGRR-----------DAPDARATVGMIDARP-----NSRNTVPGECFFTV 286 (414)
T ss_pred eECCCCCCCCcccccCHHHHHHHHHHHHHHHHHh-----------cCCCeEEEEEEEEeeC-----CCcceECCeEEEEE
Confidence 9999988 476 46 9999999999999775321 0123589999999862 17899999999999
Q ss_pred eeecCCCCCHHHHHHHHHHHhcc--CCCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCce
Q 013216 297 DIRVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPE 374 (447)
Q Consensus 297 d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 374 (447)
|+|+.|.++.+.+.++|+++++. ..++++++ +.. ....|+ ...++++++.++++++..+... ...
T Consensus 287 diR~~~~e~~e~v~~~i~~~~~~~~~~~~~~~~---~~~------~~~~~~---~~~d~~lv~~l~~a~~~~G~~~-~~~ 353 (414)
T PRK12891 287 EFRHPDDAVLDRLDAALRAELARIADETGLRAD---IEQ------IFGYAP---APFAPGCIDAVRDAARALGLSH-MDI 353 (414)
T ss_pred EeeCCCHHHHHHHHHHHHHHHHHHHHHhCCEEE---EEE------EecCCC---cCCCHHHHHHHHHHHHHcCCCc-eec
Confidence 99999999999999999988863 23455555 431 123333 3457899999999988766543 344
Q ss_pred ecCCCcchHHHHHcCCCe-EEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhh
Q 013216 375 IFPASTDARYFRERGLPA-IGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASY 434 (447)
Q Consensus 375 ~~~g~~D~~~~~~~g~p~-~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~~ 434 (447)
.+.|++|+.++.. ++|+ +.|||+... ..|++||+++++++..++++|..++..++.-
T Consensus 354 ~~~ggtDa~~~~~-giPt~~~~gp~~~~--~aH~~dE~v~i~~l~~~~~il~~~l~~~~~~ 411 (414)
T PRK12891 354 VSGAGHDACFAAR-GAPTGMIFVPCVDG--LSHNEAEAITPEWFAAGADVLLRAVLQSAQE 411 (414)
T ss_pred CCcchHHHHHHHh-hCCEEEEEEcCCCC--CCCCccccCCHHHHHHHHHHHHHHHHHHhhh
Confidence 5678999888754 7997 689998764 6899999999999999999999999988653
No 58
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=4.6e-42 Score=346.27 Aligned_cols=350 Identities=17% Similarity=0.194 Sum_probs=266.5
Q ss_pred ChhHHHHHHHhhhcccCC-------CCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeec
Q 013216 26 SDDSIIERFRAYLQIDTS-------QPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSH 98 (447)
Q Consensus 26 ~~~~~~~~l~~l~~ips~-------s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H 98 (447)
+.+++++.+.+|.+||.. |.+++|.++++||.++|+++|++++.. .+.|++++++|..+..|+|+|.||
T Consensus 7 ~~~~~~~~~~~~~~i~~~~~~~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~----~~~nlia~~~g~~~~~~~l~~~~H 82 (414)
T PRK12890 7 NGERLLARLEELAAIGRDGPGWTRLALSDEERAARALLAAWMRAAGLEVRRD----AAGNLFGRLPGRDPDLPPLMTGSH 82 (414)
T ss_pred CHHHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEc----CCCcEEEEeCCCCCCCCEEEEeCc
Confidence 457899999999998822 224679999999999999999998854 345999999876444589999999
Q ss_pred cccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCc----ccCHH
Q 013216 99 TDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGG----HDGAE 174 (447)
Q Consensus 99 ~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~----~~G~~ 174 (447)
|||||++ |..|||++++++|.|++.|.+.+..++++|.|++++|||.|+ +.|++
T Consensus 83 ~DtVp~~----------------------g~~D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~ 140 (414)
T PRK12890 83 LDTVPNG----------------------GRYDGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSR 140 (414)
T ss_pred ccCCCCC----------------------CCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHH
Confidence 9999974 346899999999999999999888889999999999999742 35776
Q ss_pred HHHcccc----c----------------c--CCceEEE---------------EecCCc-C-cCCcceeEeeeeeeEEEE
Q 013216 175 KFADSHV----F----------------N--SLNVGIV---------------LDEGLA-S-TTEDYRAFYAERCPWWLV 215 (447)
Q Consensus 175 ~~~~~~~----~----------------~--~~~~~~~---------------~d~g~~-~-p~~~~~i~~~~~G~~~~~ 215 (447)
.+.+... + . ..|...+ .+.|.. . ......++.++||..+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~~~~i~~~~kG~~~~~ 220 (414)
T PRK12890 141 ALAGTLDVEAVLATRDDDGTTLAEALRRIGGDPDALPGALRPPGAVAAFLELHIEQGPVLEAEGLPIGVVTAIQGIRRQA 220 (414)
T ss_pred HHHcccChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEeeCcCHHHHhCCCceEEEEeecCcEEEE
Confidence 6544211 0 0 0111111 011100 0 011256889999999999
Q ss_pred EEEeecCCccCC-CC-CC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecC-CCCCCCccccccCCc
Q 013216 216 IKARGAPGHGAK-LY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAG-TPSPNGFVMNLQPSE 291 (447)
Q Consensus 216 i~v~G~~~Hs~~-p~-~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g-~~~~~~~~~n~iP~~ 291 (447)
|+++|+++|+|. |+ .+ |||..+++++.+|+.+.... ...++++++.+++| . +.|+||++
T Consensus 221 i~v~Gk~aHas~~P~~~g~nAI~~~~~~i~~l~~~~~~~-----------~~~~~~~~g~i~~gg~------~~NvIP~~ 283 (414)
T PRK12890 221 VTVEGEANHAGTTPMDLRRDALVAAAELVTAMERRARAL-----------LHDLVATVGRLDVEPN------AINVVPGR 283 (414)
T ss_pred EEEEEECCCCCcCChhhccCHHHHHHHHHHHHHHHHHhc-----------CCCeEEEEEEEEECCC------CceEECCe
Confidence 999999999986 75 55 99999999999998753211 02357888988864 4 89999999
Q ss_pred eEEEEeeecCCCCCHHHHHHHHHHHhcc--CCCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCC
Q 013216 292 AEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGK 369 (447)
Q Consensus 292 ~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~ 369 (447)
|++.+|+|+.|.++.+++.++|+++++. ...+++++ +.. ....|. ...++++++.+.+++++.+..
T Consensus 284 a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~~~---~~~------~~~~~~---~~~~~~l~~~l~~~~~~~g~~ 351 (414)
T PRK12890 284 VVFTLDLRSPDDAVLEAAEAALLAELEAIAAARGVRIE---LER------LSRSEP---VPCDPALVDAVEAAAARLGYP 351 (414)
T ss_pred EEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEE---EEE------eecCCC---cCCCHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999887763 22345555 431 122333 345689999999999887544
Q ss_pred CCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 370 LGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 370 ~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
. ....+.|++|+++|...+++++.|||+... ..|++||+++++++.+++++|..++..+++
T Consensus 352 ~-~~~~~~g~tDa~~~~~~gp~~~~~gp~~~~--~aHs~dE~v~i~~l~~~~~i~~~ll~~l~~ 412 (414)
T PRK12890 352 S-RRMPSGAGHDAAAIARIGPSAMIFVPCRGG--ISHNPEEAMDPEDLAAGARVLLDAVLRLDR 412 (414)
T ss_pred c-eecCCcccHHHHHHHhhCCEEEEEecCCCC--CCCCcCccCCHHHHHHHHHHHHHHHHHHhh
Confidence 3 344567899999999988667789998653 689999999999999999999999998854
No 59
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=1.8e-41 Score=331.18 Aligned_cols=368 Identities=21% Similarity=0.231 Sum_probs=296.1
Q ss_pred CChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCC
Q 013216 25 KSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS 104 (447)
Q Consensus 25 ~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~ 104 (447)
...++++++.++|+++|+++ .+|.+++++|.++|+++|+++. +...+...+++.++|..++ |+|.|+++||.+|.
T Consensus 9 ~~~~~l~~~rr~lH~~PEL~--f~E~~Ta~~i~~~L~~~g~~~~--~~~~~~TGvva~~~~g~~g-~tIalRAD~DALPi 83 (392)
T COG1473 9 ELKDELIEWRRDLHEHPELG--FEEYRTAAYIAEKLEELGFEVV--EVGGGKTGVVATLKGGKPG-PTIALRADMDALPI 83 (392)
T ss_pred hhhHHHHHHHHHHhhCCccc--hhHHHHHHHHHHHHHHcCCeeE--eccCCceEEEEEEcCCCCC-CEEEEEeecccCcc
Confidence 56789999999999999995 8999999999999999999933 3222356899999876553 69999999999999
Q ss_pred CCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccC
Q 013216 105 EPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNS 184 (447)
Q Consensus 105 ~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~ 184 (447)
.++ +.-||.+.. +|++|+||+. ++.+++|.+++.|.+...+++++|+|+|+|+||+++ |++.|++++.+++
T Consensus 84 ~E~--t~~~~~S~~--~G~mHACGHD---~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~--Ga~~mi~~G~~~~ 154 (392)
T COG1473 84 QEE--TGLPFASKN--PGVMHACGHD---GHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGG--GAKAMIEDGVFDD 154 (392)
T ss_pred ccc--cCCCcccCC--CCCcccCCch---HHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccc--cHHHHHhcCCccc
Confidence 752 347898865 6899999976 899999999999998866799999999999999875 8999999999988
Q ss_pred -CceEEEEecCCcCcCCcceeEee--eeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccc
Q 013216 185 -LNVGIVLDEGLASTTEDYRAFYA--ERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLK 260 (447)
Q Consensus 185 -~~~~~~~d~g~~~p~~~~~i~~~--~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 260 (447)
+|.++-++.....|.+...+..| .-+...++++++|+++|++.|+.+ ||+.+++.++..|+.+..+..++
T Consensus 155 ~vD~v~g~H~~p~~~~g~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p------ 228 (392)
T COG1473 155 FVDAVFGLHPGPGLPVGTVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDP------ 228 (392)
T ss_pred cccEEEEecCCCCCCCceEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCC------
Confidence 89888887533224455555555 356788999999999999999999 99999999999999875533221
Q ss_pred cCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc--CCCCceEeecccccccccc
Q 013216 261 AEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQRASLH 338 (447)
Q Consensus 261 ~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~ 338 (447)
.....++++.+++|. +.|+||+.+++.+++|+.+....+.+.++|+++++. ..++++++ +.
T Consensus 229 --~~~~vv~vg~~~aG~------a~NVIpd~A~l~gtvR~~~~~~~~~~~~~i~~ia~g~a~~~g~~~e---i~------ 291 (392)
T COG1473 229 --LDSAVVTVGKIEAGT------AANVIPDSAELEGTIRTFSDEVREKLEARIERIAKGIAAAYGAEAE---ID------ 291 (392)
T ss_pred --ccCeEEEEEEecCCC------cCCcCCCeeEEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhCCeEE---EE------
Confidence 112478889999887 889999999999999999999999999999998873 45677776 44
Q ss_pred ccCCCCcccccCCCChHHHHHHHHHHHhcCCC---CCc-eecCCCcchHHHHHcCCCeEEEccCCCC-C---CCCCCCCc
Q 013216 339 DKFGRPILTATDSSNPWWNLLEEAVRKANGKL---GKP-EIFPASTDARYFRERGLPAIGFSPMANT-P---ILLHDHNE 410 (447)
Q Consensus 339 ~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~---~~~-~~~~g~~D~~~~~~~g~p~~~~gp~~~~-~---~~~H~~~E 410 (447)
+...++++.+|..+++.+++++++..++. ... ..+.|++|+++|... +|...|-.|... . ...|+|..
T Consensus 292 ---~~~~~p~~~Nd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsEDf~~~~~~-~Pg~~~~lG~~~~~~~~~~~H~p~~ 367 (392)
T COG1473 292 ---YERGYPPVVNDPALTDLLAEAAEEVGGEEVVVVELPPSMAGSEDFGYYLEK-VPGAFFFLGTGSADGGTYPLHHPKF 367 (392)
T ss_pred ---ecCCCCCccCCHHHHHHHHHHHHHhccccceecccCCCCCccchHHHHHHh-CCeeEEEeecCcCCCCcccccCCcC
Confidence 22223456788999999999999987532 122 234599999999988 675433333222 1 23899999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHh
Q 013216 411 FLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 411 ~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
.++.+.+..+++++..+...+..
T Consensus 368 ~~de~~l~~g~~~~~~~~~~~~~ 390 (392)
T COG1473 368 DFDEAALATGVKLLAALALLYLA 390 (392)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999887754
No 60
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=2.8e-41 Score=338.90 Aligned_cols=346 Identities=15% Similarity=0.171 Sum_probs=261.2
Q ss_pred HHHHHHHhhhcccCC--------CCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccc
Q 013216 29 SIIERFRAYLQIDTS--------QPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTD 100 (447)
Q Consensus 29 ~~~~~l~~l~~ips~--------s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~D 100 (447)
++++.+..+-+|.+. +.+++|.++++||.++|+++|++++.. ...||+++++|+.++.|.|+|.||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~~~~~G~~~~~~----~~~nl~a~~~g~~~~~~~l~~~~H~D 77 (401)
T TIGR01879 2 RLWETLMWLGEVGADPAGGMTRLALSPEDREAQDLFKKRMRAAGLEVRFD----EVGNLIGRKEGTEPPLEVVLSGSHID 77 (401)
T ss_pred hHHHHHHHHhcccCCCCCceEeCCCCHHHHHHHHHHHHHHHHCCCEEEEe----cCCcEEEEecCCCCCCCEEEEecccc
Confidence 456666777666321 235679999999999999999998753 34599999988765458999999999
Q ss_pred cCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccC----cccCHHHH
Q 013216 101 VVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG----GHDGAEKF 176 (447)
Q Consensus 101 tvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g----~~~G~~~~ 176 (447)
|||.+ |+++ .+.+++++|.+++.|++.+.+++++|.|+++++||.+ ++.|++.+
T Consensus 78 tV~~g----------------g~~d------g~~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~ 135 (401)
T TIGR01879 78 TVVNG----------------GNFD------GQLGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNM 135 (401)
T ss_pred cCCCC----------------CccC------CHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHH
Confidence 99974 3333 3458999999999999999989999999999999973 34788888
Q ss_pred Hcccccc--------------------CCceEE---------------EEecCCc-C-cCCcceeEeeeeeeEEEEEEEe
Q 013216 177 ADSHVFN--------------------SLNVGI---------------VLDEGLA-S-TTEDYRAFYAERCPWWLVIKAR 219 (447)
Q Consensus 177 ~~~~~~~--------------------~~~~~~---------------~~d~g~~-~-p~~~~~i~~~~~G~~~~~i~v~ 219 (447)
+...... +.+..+ .++.|.. + .+....++.+++|..+++|+++
T Consensus 136 ~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~Hieqg~~l~~~g~~~~v~~~~~G~~~~~i~v~ 215 (401)
T TIGR01879 136 VGLANPEDVRNICDAKGISFAEAMKACGPDLPNQPLRPRGDIKAYVELHIEQGPVLESNGQPIGVVNAIAGQRWYKVTLN 215 (401)
T ss_pred hcccchhHHHhCcCCCCCCHHHHHHHcCCCcccccccccccccEEEEEEEcCCcChhhCCCeEEEEEEecCcEEEEEEEE
Confidence 6422000 001111 1111111 0 1112578999999999999999
Q ss_pred ecCCccCCCC--CC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEE
Q 013216 220 GAPGHGAKLY--DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGF 296 (447)
Q Consensus 220 G~~~Hs~~p~--~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~ 296 (447)
|+++|++.++ .+ ||+..+++++..|+.+.... ....+.+++.+++|. ...|+||++|++.+
T Consensus 216 G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~~~~-----------~~~~~~~vg~i~~g~-----~~~NvVP~~a~~~~ 279 (401)
T TIGR01879 216 GESNHAGTTPMSLRRDPLVAASRIIHQVEEKAKRM-----------GDPTVGTVGKVEARP-----NGVNVIPGKVTFTL 279 (401)
T ss_pred EECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc-----------CCCeEEEEEEEEecC-----CceEEECCEEEEEE
Confidence 9999998643 46 99999999999998753211 112367888888752 17899999999999
Q ss_pred eeecCCCCCHHHHHHHHHHHhcc--CCCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCce
Q 013216 297 DIRVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPE 374 (447)
Q Consensus 297 d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 374 (447)
|+|+.|.++.+++.++|+++++. ...+++++ ++. ....|+ ...++++++.+.+++++++... ...
T Consensus 280 diR~~p~~~~e~v~~~i~~~~~~~~~~~~~~~~---~~~------~~~~~~---~~~d~~lv~~l~~a~~~~g~~~-~~~ 346 (401)
T TIGR01879 280 DLRHTDAAVLRDFTQQLENDIKAISDERDIGID---IER------WMDEEP---VPCSEELVAALTELCERLGYNA-RVM 346 (401)
T ss_pred EeeCCCHHHHHHHHHHHHHHHHHHHHHcCceEE---EEE------eecCCC---cCCCHHHHHHHHHHHHHcCCCc-ccc
Confidence 99999999999999999988863 22345555 431 122232 4558899999999999876554 344
Q ss_pred ecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHH
Q 013216 375 IFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 431 (447)
Q Consensus 375 ~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l 431 (447)
.++++||+++|...++|++.|||+... .+|++||+++++++.+++++|.+++.++
T Consensus 347 ~~~ggtDa~~~~~~~~~~v~fgPg~~~--~aH~~dE~v~~e~l~~~~~vl~~~i~~l 401 (401)
T TIGR01879 347 VSGAGHDAQILAPIVPIGMIFIPSING--ISHNPAEWSNITDCAEGAKVLYLMVYQL 401 (401)
T ss_pred ccchHHHHHHHHhhCCEEEEEecCCCC--CcCCCCccCCHHHHHHHHHHHHHHHHhC
Confidence 567899999999988899999999764 6899999999999999999999998753
No 61
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=1e-39 Score=326.96 Aligned_cols=347 Identities=14% Similarity=0.169 Sum_probs=265.1
Q ss_pred hHHHHHHHhhhcccCC--------CCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeecc
Q 013216 28 DSIIERFRAYLQIDTS--------QPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHT 99 (447)
Q Consensus 28 ~~~~~~l~~l~~ips~--------s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~ 99 (447)
.++++.+.+|-+|.+. ..+..+.++.+|+.+||+++|++++... ..|++++++|..++.|+|++.+||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~Gl~v~~D~----~gN~~~~~~g~~~~~~~i~~gsHl 78 (406)
T TIGR03176 3 KHFRQAIEELSSFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESGLETRFDD----VGNLYGRLVGTEFPEETILTGSHI 78 (406)
T ss_pred HHHHHHHHHHhccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCEEEEcC----CCcEEEEecCCCCCCCeEEEeccc
Confidence 4677888888887321 1255688999999999999999987533 239999999988778999999999
Q ss_pred ccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccC----cccCHHH
Q 013216 100 DVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG----GHDGAEK 175 (447)
Q Consensus 100 Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g----~~~G~~~ 175 (447)
||||.+ |.-|.+.|+++.|++++.|++++.+++++|.++++.+||.+ ++.|++.
T Consensus 79 Dtv~~g----------------------G~~dg~~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~ 136 (406)
T TIGR03176 79 DTVVNG----------------------GNLDGQFGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKN 136 (406)
T ss_pred cCCCCC----------------------CccCchhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHH
Confidence 999976 22345569999999999999999999999999999999965 1457777
Q ss_pred HHcc---c-c--cc--------------------------CCceE--EEEecCCcC--cCCcceeEeeeeeeEEEEEEEe
Q 013216 176 FADS---H-V--FN--------------------------SLNVG--IVLDEGLAS--TTEDYRAFYAERCPWWLVIKAR 219 (447)
Q Consensus 176 ~~~~---~-~--~~--------------------------~~~~~--~~~d~g~~~--p~~~~~i~~~~~G~~~~~i~v~ 219 (447)
+... . . .. .++.. +.++.|..- ......++.+.+|..+++|+|+
T Consensus 137 ~~g~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~elHieqG~~Le~~g~~igiv~~~~G~~~~~v~v~ 216 (406)
T TIGR03176 137 IFGLAKPEDVRTIEDAKGIKFVDAMHACGFDLRKAPTVRDDIKAFVELHIEQGCVLESEGQSIGVVNAIVGQRRYTVNLK 216 (406)
T ss_pred HhCCCCHHHHHhCcCCCCCCHHHHHHHcCCCcccccccccccceEEEEEECCCcchHHCCCeEEEEeecccceEEEEEEE
Confidence 7631 0 0 00 01111 223223321 2224678999999999999999
Q ss_pred ecCCccCCCC-C-C-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeec-CCCCCCCccccccCCceEEE
Q 013216 220 GAPGHGAKLY-D-N-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKA-GTPSPNGFVMNLQPSEAEAG 295 (447)
Q Consensus 220 G~~~Hs~~p~-~-g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~-g~~~~~~~~~n~iP~~~~~~ 295 (447)
|+++|+|.|+ . + ||+..+++++..+..+... ....++++++.+++ |. +.|+||++|++.
T Consensus 217 GkaaHag~~p~~~r~dAi~aaa~~i~~l~~~~~~-----------~~~~~~~tvG~I~~gg~------~~NvIP~~a~~~ 279 (406)
T TIGR03176 217 GEANHAGTTPMSYRRDTVYAFSRICTQSIERAKE-----------IGDPLVLTFGKVEPVPN------TVNVVPGETTFT 279 (406)
T ss_pred EECCCCCCCCcccccCHHHHHHHHHHHHHHHHHh-----------cCCCcEEEEEEEEEcCC------ceEEECCeEEEE
Confidence 9999999855 3 3 9999999999998764221 11224788999984 44 899999999999
Q ss_pred EeeecCCCCCHHHHHHHHHHHhcc--CCCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCc
Q 013216 296 FDIRVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKP 373 (447)
Q Consensus 296 ~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 373 (447)
+|+|+.+.++.+.+.++|++.++. ...+++++ +.. .....| ...++++++.+.+++++.++.. ..
T Consensus 280 ~DiR~~~~~~~e~v~~~i~~~i~~ia~~~g~~~e---i~~-----~~~~~p----~~~d~~lv~~l~~a~~~~~~~~-~~ 346 (406)
T TIGR03176 280 IDCRHTDAAVLRNFTKELENDMKAIADEMDITID---IDL-----WMDEAP----VPMNKEIVAIIEQLAKAEKLNY-RL 346 (406)
T ss_pred EEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEE---EEE-----EecCCC----CCCCHHHHHHHHHHHHHcCCCc-ee
Confidence 999999999999988888887763 23455565 431 012222 3447899999999999987654 44
Q ss_pred eecCCCcchHHHHHcCCCe-EEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 374 EIFPASTDARYFRERGLPA-IGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 374 ~~~~g~~D~~~~~~~g~p~-~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
..+++++|+++|.+. +|+ +.|||+..+ ..|+|||+++++++.+++++|..++..+++
T Consensus 347 ~~sggg~Da~~~~~~-vP~~~ifgp~~~g--~~H~p~E~v~~e~l~~g~~vl~~~l~~l~~ 404 (406)
T TIGR03176 347 MHSGAGHDAQIFAPR-VPTAMIFVPSIGG--ISHNPAERTNIEDLVEGVKTLADMLYELAY 404 (406)
T ss_pred cCcccHHHHHHHHHH-CCEEEEEEeCCCC--CCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 456689999999987 776 689998654 689999999999999999999999999876
No 62
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=1.7e-38 Score=330.95 Aligned_cols=356 Identities=16% Similarity=0.156 Sum_probs=266.4
Q ss_pred hhcCCCCChhHHHHHHHhhhcccCCC-----------CCCChhHHHHHHHHHHHHCCC-ceEEEeecCCCCeEEEEecCC
Q 013216 19 IFSSPAKSDDSIIERFRAYLQIDTSQ-----------PNPDYTNASKFILAQAEALSL-ESQTLEFAKNKPLILLKWPGS 86 (447)
Q Consensus 19 ~~~~~~~~~~~~~~~l~~l~~ips~s-----------~~~~e~~~~~~i~~~l~~~G~-~~~~~~~~~~~~nl~~~~~g~ 86 (447)
++.......+++++.+.+|-+|+... .+..+.++++|+.+||+++|+ +++. + ...|++++++|.
T Consensus 172 ~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~~v~~-D---~~GNl~~~~~g~ 247 (591)
T PRK13590 172 KFGAEPVLGNDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFDEVHI-D---AVGNVVGRYKGS 247 (591)
T ss_pred HhCCCchHHHHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCCeeeE-C---CCCCEEEEecCC
Confidence 34455566788999999999986521 134567999999999999999 7664 3 334999999987
Q ss_pred CCCCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcc
Q 013216 87 NPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEE 166 (447)
Q Consensus 87 ~~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 166 (447)
+++.|+|++.+||||||.+ |+ .|+++|++++|++++.|.+.++.++++|.|+++++||
T Consensus 248 ~~~~~~v~~gsHlDTV~~g----------------G~------~DG~~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EE 305 (591)
T PRK13590 248 TPQAKRLLTGSHYDTVRNG----------------GK------YDGRLGIFVPMACVRELHRQGRRLPFGLEVVGFAEEE 305 (591)
T ss_pred CCCCCeEEEecccccCCCC----------------CC------cccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCc
Confidence 7667899999999999864 33 4677899999999999999998888999999999999
Q ss_pred cC----cccCHHHHH--------cc----cc----------c------------cCCceE--EEEecCCc--CcCCccee
Q 013216 167 IG----GHDGAEKFA--------DS----HV----------F------------NSLNVG--IVLDEGLA--STTEDYRA 204 (447)
Q Consensus 167 ~g----~~~G~~~~~--------~~----~~----------~------------~~~~~~--~~~d~g~~--~p~~~~~i 204 (447)
.+ ++.|++.+. +. +. + ..+... +.++.|.. .......+
T Consensus 306 g~rF~~~~~GS~~~~G~~~~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~~~gv 385 (591)
T PRK13590 306 GQRYKATFLGSGALIGDFDPAWLDQKDADGITMREAMQHAGLCIDDIPKLRRDPARYLGFVEVHIEQGPVLNELDLPLGI 385 (591)
T ss_pred cccCCccccchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCceEE
Confidence 63 235777532 10 00 0 001111 11222211 00113679
Q ss_pred EeeeeeeEEEEEEEeecCCccCC-CCC-C-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeec-CCCCC
Q 013216 205 FYAERCPWWLVIKARGAPGHGAK-LYD-N-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKA-GTPSP 280 (447)
Q Consensus 205 ~~~~~G~~~~~i~v~G~~~Hs~~-p~~-g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~-g~~~~ 280 (447)
+.+.+|..+++|+|+|+++|+|. |.. + ||+..+++++..++.+... ...++++++.+.. |.
T Consensus 386 V~~~~G~~~~~v~v~GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~------------~~~~v~tVG~i~~~Gg--- 450 (591)
T PRK13590 386 VTSINGSVRYVGEMIGMASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ------------DGDSVGTVGMLEVPGG--- 450 (591)
T ss_pred EeeeeccEEEEEEEEeECCCCCCCCchhcccHHHHHHHHHHHHHHHHhc------------CCCcEEEEEEEEECCC---
Confidence 99999999999999999999997 443 4 9999999999988764210 0113567777763 32
Q ss_pred CCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc--CCCCceEeeccccccccccccCCCCcccccCCCChHHHH
Q 013216 281 NGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNL 358 (447)
Q Consensus 281 ~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 358 (447)
..|+||++|++.+|+|+.+.++.+.+.++|++.++. ...+++++ ++. ....| ++..+.++++.
T Consensus 451 ---~~NVIP~~a~~~iDiR~~~~e~~e~v~~~i~~~i~~ia~~~g~~ve---i~~------~~~~~---~~~~d~~lv~~ 515 (591)
T PRK13590 451 ---SINVVPGRCRFSLDIRAPTDAQRDAMVADVLAELEAICERRGLRYT---LEE------TMRAA---AAPSAPAWQQR 515 (591)
T ss_pred ---CCceECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEE---EEE------eecCC---CcCCCHHHHHH
Confidence 899999999999999999999999998888877763 23456666 441 12222 35667899999
Q ss_pred HHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013216 359 LEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 432 (447)
Q Consensus 359 ~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~ 432 (447)
+.+++++++... ....++|++|+++|...+++++.|||+..+ ...|+++||++++++.+++++|..++..++
T Consensus 516 ~~~aa~~~G~~~-~~~~sggg~Da~~~a~~~p~~mifgpg~~~-g~sH~p~E~v~~edL~~g~~vl~~ll~~l~ 587 (591)
T PRK13590 516 WEAAVAALGLPL-FRMPSGAGHDAMKLHEIMPQAMLFVRGENA-GISHNPLESSTADDMQLAVQAFQHLLDQLA 587 (591)
T ss_pred HHHHHHHcCCCc-ccCCcchhHHHHHHHHHCCEEEEEEeeCCC-CCCCCCccCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999876654 344567899999999987778999998531 268999999999999999999999998875
No 63
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=1.6e-37 Score=323.22 Aligned_cols=359 Identities=13% Similarity=0.102 Sum_probs=267.8
Q ss_pred hcCCCCChhHHHHHHHhhhcccC---CC--------CCCChhHHHHHHHHHHHHCCCc-eEEEeecCCCCeEEEEecCCC
Q 013216 20 FSSPAKSDDSIIERFRAYLQIDT---SQ--------PNPDYTNASKFILAQAEALSLE-SQTLEFAKNKPLILLKWPGSN 87 (447)
Q Consensus 20 ~~~~~~~~~~~~~~l~~l~~ips---~s--------~~~~e~~~~~~i~~~l~~~G~~-~~~~~~~~~~~nl~~~~~g~~ 87 (447)
+.....-.+++++.+.+|-+|+. .. .+..+.++.+|+.+||+++|++ ++..+ ..||+++++|.+
T Consensus 173 ~~~~~~~~~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~Gl~~v~~D~----~gNv~~~~~g~~ 248 (591)
T PRK13799 173 FGYTPAIGADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAGFDEVEIDA----VGNVVGRYKAAD 248 (591)
T ss_pred hCCChhHHHHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCCeEeECC----CCCEEEEcCCCC
Confidence 44555667889999999999962 11 2345679999999999999998 87533 249999999877
Q ss_pred CCCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCccc
Q 013216 88 PQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (447)
Q Consensus 88 ~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (447)
++.|.|++.+|+||||. +|+++|+ .|++++|.+++.|++.+.+++++|.|++..+||.
T Consensus 249 ~~~p~v~~gSHlDTV~~----------------gG~~DG~------~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg 306 (591)
T PRK13799 249 DDAKTLITGSHYDTVRN----------------GGKYDGR------EGIFLAIACVKELHEQGERLPFHFEVIAFAEEEG 306 (591)
T ss_pred CCCCeEEEeccccccCC----------------CCccccH------HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCc
Confidence 67799999999999985 5666666 5999999999999999999999999999999996
Q ss_pred C----cccCHHHHHc------------ccc-----ccC-----------------Cce--EEEEecCCc--CcCCcceeE
Q 013216 168 G----GHDGAEKFAD------------SHV-----FNS-----------------LNV--GIVLDEGLA--STTEDYRAF 205 (447)
Q Consensus 168 g----~~~G~~~~~~------------~~~-----~~~-----------------~~~--~~~~d~g~~--~p~~~~~i~ 205 (447)
. ++.|++.+.- ++. +.. ++. .+.++.|+. ......+++
T Consensus 307 ~rF~~~~~GS~~~~G~~~~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~~igvV 386 (591)
T PRK13799 307 QRFKATFLGSGALIGDFNMELLDIKDADGISLREAIQHAGHCIDAIPKIARDPADVLGFIEVHIEQGPVLLELDIPLGIV 386 (591)
T ss_pred cCCCccccchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCcEEEE
Confidence 2 3457777751 111 000 011 111122211 011246789
Q ss_pred eeeeeeEEEEEEEeecCCccCC-CC-CC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCCCCC
Q 013216 206 YAERCPWWLVIKARGAPGHGAK-LY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNG 282 (447)
Q Consensus 206 ~~~~G~~~~~i~v~G~~~Hs~~-p~-~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~ 282 (447)
.+.+|..+++|+|+|+++|+|. |. .+ ||+..+++++..++.+... .....++++++.++.+.
T Consensus 387 ~g~~G~~~~~Itv~GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~----------~~~~~~v~tVG~I~~~~----- 451 (591)
T PRK13799 387 TSIAGSARYICEFIGMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQ----------DQHASLVATMGQLNVPS----- 451 (591)
T ss_pred eeeccceEEEEEEEEECCCCCCCChhhchhHHHHHHHHHHHHHHHHHh----------cCCCCcEEEEEEEEecC-----
Confidence 9999999999999999999997 43 35 9999999999999764221 01112467788887531
Q ss_pred ccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc--CCCCceEeeccccccccccccCCCCcccccCCCChHHHHHH
Q 013216 283 FVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLE 360 (447)
Q Consensus 283 ~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 360 (447)
++.|+||++|++.+|+|+.+.++.+.+.++|++.++. ...+++++ ++. ....| ++.++.++++.+.
T Consensus 452 ga~NvIP~~a~~~~DiR~~~~e~~e~l~~~i~~~i~~ia~~~g~~~e---i~~------~~~~~---~~~~d~~lv~~~~ 519 (591)
T PRK13799 452 GSTNVIPGRCQFSLDIRAATDEIRDAAVADILAEIAAIAARRGIEYK---AEL------AMKAA---AAPCAPELMKQLE 519 (591)
T ss_pred CCCceECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEE---EEE------EecCC---CcCCCHHHHHHHH
Confidence 1789999999999999999999999888777766652 22445555 431 12222 3466788999999
Q ss_pred HHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 361 EAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 361 ~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
+++++.+... ....+++++|+++|...+++++.|+|++.. ...|+|+||++++++..++++|.+++..+++
T Consensus 520 ~a~~~~G~~~-~~~~sgag~Da~~~a~~~p~amif~~~g~~-g~sHsp~E~v~~edL~~g~~vl~~~l~~l~~ 590 (591)
T PRK13799 520 AATDAAGVPL-FELASGAGHDAMKIAEIMDQAMLFTRCGNA-GISHNPLESMTADDMELSADAFLDFLNNFAE 590 (591)
T ss_pred HHHHHcCCCc-eecCcchHHHHHHHHhhCCEEEEEEecCCC-CCCCCccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 9988877654 334567899999999998889999886432 2589999999999999999999999988753
No 64
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.95 E-value=5.3e-27 Score=211.06 Aligned_cols=183 Identities=31% Similarity=0.541 Sum_probs=149.4
Q ss_pred EEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCH
Q 013216 94 LLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGA 173 (447)
Q Consensus 94 ll~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~ 173 (447)
+|++||||||. .++|+++||++..+ +|++||||++|+|+++++++.|++.|++.+.+++++|.|+|+++||+|+..|+
T Consensus 1 ll~~H~Dtv~~-~~~w~~~pf~~~~~-~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~ 78 (189)
T PF01546_consen 1 LLYAHMDTVPG-PEGWKHDPFELSIE-DGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGA 78 (189)
T ss_dssp EEEEES-BCST-GGGSSSSTTSEEEE-TTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHH
T ss_pred CccccccccCC-cCcCCCCCcccEEE-CCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchh
Confidence 68999999995 78999999999997 99999999999999999999999999998889999999999999999974599
Q ss_pred HHHHccc--cccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhh
Q 013216 174 EKFADSH--VFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQ 251 (447)
Q Consensus 174 ~~~~~~~--~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~ 251 (447)
+.+++++ ...+.++.++.+ |+.. ....
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~e-----~~~~-~~~~--------------------------------------------- 107 (189)
T PF01546_consen 79 KHLLEEGAFFGLHPDYVIIGE-----PTGK-GGVG--------------------------------------------- 107 (189)
T ss_dssp HHHHHHCEEEEEEESEEEECE-----CETT-SEEE---------------------------------------------
T ss_pred hhhhhhccccccccccccccc-----cccc-cccc---------------------------------------------
Confidence 9999873 112234444432 2221 1111
Q ss_pred HHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccc
Q 013216 252 FDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQF 331 (447)
Q Consensus 252 ~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~ 331 (447)
.
T Consensus 108 ---------------------------------------------------------------------------~---- 108 (189)
T PF01546_consen 108 ---------------------------------------------------------------------------S---- 108 (189)
T ss_dssp ---------------------------------------------------------------------------H----
T ss_pred ---------------------------------------------------------------------------c----
Confidence 2
Q ss_pred cccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHH---HcCCCeEEEccCCCCCCCCCCC
Q 013216 332 KQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFR---ERGLPAIGFSPMANTPILLHDH 408 (447)
Q Consensus 332 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~---~~g~p~~~~gp~~~~~~~~H~~ 408 (447)
..+.++++.+.+++++.++....+...++++|++++. ..++|++.|||+.. .+|++
T Consensus 109 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tD~~~~~~~~~~~~~~i~~G~~~~---~~H~~ 167 (189)
T PF01546_consen 109 ------------------DNDPPLVQALQAAAQEVGGEPPEPVASGGGTDAGFLAEVKGLGIPAIGFGPGGS---NAHTP 167 (189)
T ss_dssp ------------------CTCHHHHHHHHHHHHHTTSSEEEEEEESSSSTHHHHHCHHHTTEEEEEEESCEE---STTST
T ss_pred ------------------cccHHHHHHHHHHHHHHhhccccccceeccccchhhhhhhccccceeeeCCCCC---CCCCC
Confidence 2245799999999999987323667888999999999 56899999999984 69999
Q ss_pred CccccHHHHHHHHHHHHHHHH
Q 013216 409 NEFLNQAEYLKGIDIYESIIK 429 (447)
Q Consensus 409 ~E~v~~~~l~~~~~~~~~~l~ 429 (447)
||+++++++.+++++|+.+++
T Consensus 168 ~E~i~~~~l~~~~~~~~~~l~ 188 (189)
T PF01546_consen 168 DEYIDIEDLVKGAKIYAALLE 188 (189)
T ss_dssp T-EEEHHHHHHHHHHHHHHHH
T ss_pred CcEecHHHHHHHHHHHHHHHh
Confidence 999999999999999999886
No 65
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.94 E-value=4.4e-25 Score=215.92 Aligned_cols=362 Identities=19% Similarity=0.177 Sum_probs=266.6
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceE-EEee-------cCCCCeEEEEecCCCCCCCeEEEee
Q 013216 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQ-TLEF-------AKNKPLILLKWPGSNPQLPSILLNS 97 (447)
Q Consensus 26 ~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~-~~~~-------~~~~~nl~~~~~g~~~~~~~ill~~ 97 (447)
..+++++.+.++++||+.| .++++++.++..|++.+|+.++ .+.. ..+..-+.++++++.+--|.+-+.+
T Consensus 3 ~~~~l~~~F~~~~kI~~~S--~~e~~~~p~~~~~~k~~~~~v~dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~s 80 (414)
T COG2195 3 KMERLLDRFLELVKIPTQS--KHEKAVAPSTVGQAKLLGLLVEDELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFIS 80 (414)
T ss_pred chHHHHHHHHHHeeCCCCC--CCccccccccHHHHHHcCchhhhhhccccccccccCCCCeeeEEeeccccccccccccc
Confidence 5678999999999999985 7888999999999999999883 1111 1121135566777655457899999
Q ss_pred ccccCCCC-----CCCC---------------------CcCCCceeeCCCCcEEecCc----ccchhHHHHHHHHHHHHH
Q 013216 98 HTDVVPSE-----PSKW---------------------SHHPFGAHLDSQGNIFARGS----QDMKCVGMQYLEAIRRLK 147 (447)
Q Consensus 98 H~Dtvp~~-----~~~W---------------------~~~Pf~~~~~~~g~l~GrG~----~D~k~~~a~~l~a~~~l~ 147 (447)
|+||+|.. +.+| .++|.......+.-+.-.|+ +|+|+|++.++.++..+.
T Consensus 81 h~Dt~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~ 160 (414)
T COG2195 81 HHDTVPDPIGPNVNPQILKATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLR 160 (414)
T ss_pred cccccccccccccCCceeeeccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHh
Confidence 99999642 1334 13344333321133444565 699999999999999999
Q ss_pred HcC-CCCceeEEEEeecCcccCcccCHHHHHccccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccC
Q 013216 148 ASG-FQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGA 226 (447)
Q Consensus 148 ~~~-~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~ 226 (447)
+.. .-++++|++.|+++||.|+ .|+..+.-. ++. +++++.+|+| + ...+.+...+...+++++.|+..|++
T Consensus 161 ~~~~~i~h~~i~~g~s~~Ee~g~-rg~~~~~~a-~f~-a~~ay~iDGg---~--~g~i~~ea~~~~~~~~~~~g~~~h~~ 232 (414)
T COG2195 161 EKHPEIPHGGIRGGFSPDEEIGG-RGAANKDVA-RFL-ADFAYTLDGG---P--VGEIPREAFNAAAVRATIVGPNVHPG 232 (414)
T ss_pred hcCccccccCeEEEecchHHhhh-hhhhhccHH-hhh-cceeEecCCC---c--cCeeeeeccchheeeeeeeccCcCcc
Confidence 762 3478999999999999986 688776543 443 5789999943 2 24788888999999999999999988
Q ss_pred CCC-CC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCC
Q 013216 227 KLY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTT 304 (447)
Q Consensus 227 ~p~-~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~ 304 (447)
... .. |++..+.+++..+..... ...++...+..+.+. ..|.|.+.+.....+|..+..
T Consensus 233 ~a~~~~i~a~~~a~e~~~~~~~~~~-------------~e~t~~~~Gv~~~~~------~~~~V~~~s~~~~~iR~~d~~ 293 (414)
T COG2195 233 SAKGKMINALLLAAEFILELPLEEV-------------PELTEGPEGVYHLGD------STNSVEETSLNLAIIRDFDNL 293 (414)
T ss_pred chHHHHhhHHHhhhhhhhcCCcccc-------------cccccccceEEeccc------cccchhhhhhhhhhhhhcchh
Confidence 643 22 666655555554432111 012455566666665 889999999999999999987
Q ss_pred CHHHHHHHHHHHhcc----CC--CCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCC
Q 013216 305 DAESLERRIVEEWAP----AS--RNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPA 378 (447)
Q Consensus 305 ~~~~i~~~i~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g 378 (447)
..+..+..++++++. .. .+++++ + ...||.+ ....++++++.+++++++++.++ ......|
T Consensus 294 ~~~s~~~~~~~~~~~~~~~~g~~~~~~~~---~--------~~~Yp~~-~~~~~~~iv~~a~~a~~~l~~~p-~v~~i~g 360 (414)
T COG2195 294 LFRARKDSMKDVVEEMAASLGKLAGAELE---V--------KDSYPGW-KIKPDSPLVDLAKKAYKELGIKP-KVKPIHG 360 (414)
T ss_pred HHHHhHHHHHHHHHHHHHHhhhccceEEE---E--------eccccCc-CCCCCchHHHHHHHHHHHhCCCc-eEEEeec
Confidence 777777777776652 11 334444 3 2456665 56778999999999999999884 7778889
Q ss_pred CcchHHHHHcCCCe--EEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 379 STDARYFRERGLPA--IGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 379 ~~D~~~~~~~g~p~--~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
|+|++.+...|+|+ +..|| .. +.|+++|+++++++.+.+.++..++..+.+
T Consensus 361 Gtd~~~is~~g~p~~~i~~Gp-~~---n~Hs~~E~v~I~s~ek~~~~l~~l~~~~~~ 413 (414)
T COG2195 361 GTDGGVLSFKGLPTPNISTGP-GE---NPHSPDEFVSIESMEKAVQVLVELLKLAAA 413 (414)
T ss_pred ccchhhhhccCCCCceEeccc-cc---CCCCccceeehHHHHHHHHHHHHHHHHhhc
Confidence 99999999998775 46666 44 599999999999999999999998887653
No 66
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.85 E-value=1.6e-20 Score=178.25 Aligned_cols=276 Identities=18% Similarity=0.163 Sum_probs=192.0
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCC-ceE-------EEeecC-CCCeEEEEecCCCCCCCeEEEe
Q 013216 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSL-ESQ-------TLEFAK-NKPLILLKWPGSNPQLPSILLN 96 (447)
Q Consensus 26 ~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~-~~~-------~~~~~~-~~~nl~~~~~g~~~~~~~ill~ 96 (447)
..+++.++..+|++-||++.+.+|...+++|...|.++.. +.. -++..+ ++.||+|-++|.. .+++|++.
T Consensus 6 s~e~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~-~k~tvvl~ 84 (553)
T COG4187 6 SSERVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGT-SKRTVVLH 84 (553)
T ss_pred hHHHHHHHHHHHeeccccCCCcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCC-CCceEEEe
Confidence 3789999999999999999899999999999999888752 111 112122 7889999999843 46899999
Q ss_pred eccccCCCCC-CCCCcCCCcee-----------e---------CCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCce
Q 013216 97 SHTDVVPSEP-SKWSHHPFGAH-----------L---------DSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVR 155 (447)
Q Consensus 97 ~H~Dtvp~~~-~~W~~~Pf~~~-----------~---------~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~ 155 (447)
||+|||...+ ...+.-.|.+. . +.++||+|||+.|||+|+|+.|++++.+.+++ ...+
T Consensus 85 gH~DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~~-~~~G 163 (553)
T COG4187 85 GHFDTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAART-DRQG 163 (553)
T ss_pred eccceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhCC-CCCC
Confidence 9999999875 22332233330 0 15789999999999999999999999999874 5789
Q ss_pred eEEEEeecCcccCcccCHHHHHccc-ccc---CCc--eEEEEecCCc-CcC-CcceeEeeeeeeEEEEEEEeecCCccCC
Q 013216 156 SVYLSFVPDEEIGGHDGAEKFADSH-VFN---SLN--VGIVLDEGLA-STT-EDYRAFYAERCPWWLVIKARGAPGHGAK 227 (447)
Q Consensus 156 ~i~~~~~~~EE~g~~~G~~~~~~~~-~~~---~~~--~~~~~d~g~~-~p~-~~~~i~~~~~G~~~~~i~v~G~~~Hs~~ 227 (447)
||.|+.+||||..+ .|++..+..- .+. .++ .+|+.|.-.. .++ ..-.++.|..|....-+-|.|...|.|.
T Consensus 164 NlLf~a~pdEE~~s-~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ryvYtGtiGKLLp~f~vvG~etHvG~ 242 (553)
T COG4187 164 NLLFMAVPDEEVES-RGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRYVYTGTIGKLLPFFFVVGCETHVGY 242 (553)
T ss_pred cEEEEeccchhhhc-ccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceEEEeccchhhcceeEEEeeccccCC
Confidence 99999999999886 6888776531 111 122 2444442110 111 1236888999999999999999999999
Q ss_pred CCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCc-ceeeeeeeecCCCCCCCcccc-ccCCceEEEEeeecCCCC
Q 013216 228 LYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEV-VSVNMAFLKAGTPSPNGFVMN-LQPSEAEAGFDIRVPPTT 304 (447)
Q Consensus 228 p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~-~t~~~~~i~~g~~~~~~~~~n-~iP~~~~~~~d~R~~~~~ 304 (447)
|+.| ||-..+++++..|+. +....+... +. ..+. +.+.....+-+ .| +.|.++.+.|++=+.. .
T Consensus 243 ~f~Gvnan~maSei~~~le~-N~~l~dr~~-Ge--~t~PPs~L~qkDlKe~--------Y~VqTp~~a~~~fN~l~h~-~ 309 (553)
T COG4187 243 PFEGVNANFMASEITRRLEL-NADLADRVD-GE--ITPPPSCLEQKDLKES--------YNVQTPERAWLYFNWLYHS-R 309 (553)
T ss_pred cccCCCHHHHHHHHHHHhhc-ChhhhhhhC-Ce--eCCCcHhhhhhhhhhh--------ccccCcchhhhhheehhhc-C
Confidence 9999 999999998888753 222222211 10 0111 12222333332 23 3688888888887664 5
Q ss_pred CHHHHHHHHHHHh
Q 013216 305 DAESLERRIVEEW 317 (447)
Q Consensus 305 ~~~~i~~~i~~~~ 317 (447)
+.+++.+++++.+
T Consensus 310 ta~~~~d~l~~~a 322 (553)
T COG4187 310 TAKELFDRLKEEA 322 (553)
T ss_pred CHHHHHHHHHHHH
Confidence 6666766665433
No 67
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.76 E-value=1.2e-17 Score=159.73 Aligned_cols=122 Identities=18% Similarity=0.218 Sum_probs=97.0
Q ss_pred CCCChhHHHHHHHHHHHHCCCceEEEeec--------C--------CCCeEEEEecCCCCCCCeEEEeeccccCCCCC-C
Q 013216 45 PNPDYTNASKFILAQAEALSLESQTLEFA--------K--------NKPLILLKWPGSNPQLPSILLNSHTDVVPSEP-S 107 (447)
Q Consensus 45 ~~~~e~~~~~~i~~~l~~~G~~~~~~~~~--------~--------~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~-~ 107 (447)
.+++|.++++||.++|+++|++++..... . ...||++.++|+. .+.|+|.||+|||++.. .
T Consensus 50 gS~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~--~~~Ill~AH~DTV~p~~~~ 127 (346)
T PRK10199 50 GSPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKA--PQQIIIMAHLDTYAPQSDA 127 (346)
T ss_pred CCHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCC--CCeEEEEEEcCcCCCCCCC
Confidence 46789999999999999999988754311 1 1257999998853 37899999999997542 2
Q ss_pred CCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHcc
Q 013216 108 KWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADS 179 (447)
Q Consensus 108 ~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~ 179 (447)
+| ++. .+-++++|++|||+|++++|++++.|.+.+ ++++|.|+++++||.|. .|+++++++
T Consensus 128 ~~---~~~-----~~g~~~~GA~DnasGvA~lLe~ar~l~~~~--~~~~I~fv~~~~EE~Gl-~GS~~~~~~ 188 (346)
T PRK10199 128 DV---DAN-----LGGLTLQGMDDNAAGLGVMLELAERLKNVP--TEYGIRFVATSGEEEGK-LGAENLLKR 188 (346)
T ss_pred cc---ccC-----CCCcccCCccccHHHHHHHHHHHHHHhhCC--CCCcEEEEEECCcccCc-HHHHHHHHh
Confidence 21 111 233899999999999999999999998654 67899999999999985 799999986
No 68
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.71 E-value=3.4e-15 Score=145.23 Aligned_cols=134 Identities=20% Similarity=0.240 Sum_probs=106.7
Q ss_pred hhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCC--
Q 013216 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS-- 104 (447)
Q Consensus 27 ~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~-- 104 (447)
.+.++++|++|+++||+| +.|.++++++.++|+++|++++. + +..|+++.++|.. +.++|+|.||||+|..
T Consensus 2 ~~~~~~lLk~Lv~~~s~S--G~E~~V~~~l~~~l~~~g~ev~~-D---~~Gnlia~~~g~~-~~~~v~l~aHmDevG~~V 74 (343)
T TIGR03106 2 TDYLTETLLALLAIPSPT--GFTDAVVRYVAERLEDLGIEYEL-T---RRGAIRATLPGRE-ATPARAVVTHLDTLGAMV 74 (343)
T ss_pred hHHHHHHHHHHhcCCCCC--CCHHHHHHHHHHHHHHcCCeEEE-C---CCeEEEEEECCCC-CCCeEEEEEeecccccee
Confidence 466899999999999975 88999999999999999998774 3 4559999987743 2479999999999933
Q ss_pred --------------CCC----------------C------C--C-------------cCCCc---ee-------------
Q 013216 105 --------------EPS----------------K------W--S-------------HHPFG---AH------------- 117 (447)
Q Consensus 105 --------------~~~----------------~------W--~-------------~~Pf~---~~------------- 117 (447)
++- + + . .++++ ..
T Consensus 75 ~~I~~~G~l~~~~iGG~~~~~l~g~~v~i~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~ 154 (343)
T TIGR03106 75 RELKDNGRLELVPIGHWSARFAEGARVTIFTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVR 154 (343)
T ss_pred eEECCCCeEEEEecCCCcccceeCCEEEEEeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHH
Confidence 100 0 0 0 00111 00
Q ss_pred -----------------eCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCc
Q 013216 118 -----------------LDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGG 169 (447)
Q Consensus 118 -----------------~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~ 169 (447)
. +++++|||+ .|||+++++++.+++.|.+.+.+++.+|+++|+.+||.|+
T Consensus 155 lGV~~Gd~v~~~~~~~~~-~~~~i~gr~-~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG~ 221 (343)
T TIGR03106 155 LGISVGDFVAFDPQPEFL-ANGFIVSRH-LDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVGS 221 (343)
T ss_pred cCCCCCCEEEECCccEEe-cCCEEEEEe-cccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCc
Confidence 1 478999998 9999999999999999998877788999999999999984
No 69
>PRK09961 exoaminopeptidase; Provisional
Probab=99.70 E-value=4.2e-15 Score=145.03 Aligned_cols=256 Identities=16% Similarity=0.239 Sum_probs=173.3
Q ss_pred HHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCC-----
Q 013216 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE----- 105 (447)
Q Consensus 31 ~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~----- 105 (447)
+++|++|+++|++| +.|.++++++.++|+++|.+++. + +..|+++.+.|. +.|+|+|.||||+|+.-
T Consensus 3 ~~~L~~L~~~~s~s--G~E~~v~~~i~~~l~~~~~~v~~-D---~~Gnvi~~~~g~--~~~~v~l~aHmDevg~~V~~I~ 74 (344)
T PRK09961 3 LSLLKALSEADAIA--SSEQEVRQILLEEADRLQKEVRF-D---GLGSVLIRLNES--TGPKVMICAHMDEVGFMVRSIS 74 (344)
T ss_pred HHHHHHHHhCCCCC--CChHHHHHHHHHHHHhhCCEEEE-C---CCCCEEEEEcCC--CCCEEEEEeccceeceEEEEEC
Confidence 46799999999985 89999999999999999998763 3 556999988663 34799999999999431
Q ss_pred --------C-CCCCc----------------------------CCCc-eeeC----------------------------
Q 013216 106 --------P-SKWSH----------------------------HPFG-AHLD---------------------------- 119 (447)
Q Consensus 106 --------~-~~W~~----------------------------~Pf~-~~~~---------------------------- 119 (447)
+ .+|.. +++. ..++
T Consensus 75 ~~G~l~~~~vGG~~~~~~~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~ 154 (344)
T PRK09961 75 REGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQV 154 (344)
T ss_pred CCceEEEEeCCCccccccCCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEE
Confidence 0 12210 1111 1111
Q ss_pred -CCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCceEEEEecCCcCc
Q 013216 120 -SQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLAST 198 (447)
Q Consensus 120 -~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~p 198 (447)
.++++.||. .|++.++++++.+++.+.+. +++.+++++|+..||.|. .|++..... ++ .|+++++|.+.
T Consensus 155 ~~~~~i~gka-lDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~-rGa~~aa~~--i~-pd~~I~vDv~~--- 224 (344)
T PRK09961 155 LPHQRVMGKA-FDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGL-RGGQTATRA--VS-PDVAIVLDTAC--- 224 (344)
T ss_pred ecCCEEEEee-chhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccch-HHHHHHHhc--cC-CCEEEEEeccC---
Confidence 356788866 99999999999999999765 367899999999999995 798876542 32 47777776421
Q ss_pred CCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCC
Q 013216 199 TEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTP 278 (447)
Q Consensus 199 ~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~ 278 (447)
|.-.|... ......+
T Consensus 225 -------------------------~~d~~~~~-----------------------------------~~~~~~l----- 239 (344)
T PRK09961 225 -------------------------WAKNFDYG-----------------------------------AANHRQI----- 239 (344)
T ss_pred -------------------------CCCCCCCC-----------------------------------CCccccc-----
Confidence 00000000 0000000
Q ss_pred CCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCcccccCCCChHHHH
Q 013216 279 SPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNL 358 (447)
Q Consensus 279 ~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 358 (447)
..+..+. +. . . ....+.++.+.
T Consensus 240 ------------------------------------------g~Gp~i~---~~---------D-~---~~i~~~~l~~~ 261 (344)
T PRK09961 240 ------------------------------------------GNGPMLV---LS---------D-K---SLIAPPKLTAW 261 (344)
T ss_pred ------------------------------------------CCCceEE---Ec---------c-C---CcCCCHHHHHH
Confidence 1111111 00 0 0 01224566666
Q ss_pred HHHHHHHhcCCCCCceec-CCCcchHHHHH--cCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHH
Q 013216 359 LEEAVRKANGKLGKPEIF-PASTDARYFRE--RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 431 (447)
Q Consensus 359 ~~~a~~~~~~~~~~~~~~-~g~~D~~~~~~--~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l 431 (447)
+++++++.+.+. +.... +|+||++.+.. .|+|++.+||+.. ..|+++|+++++++..++++|..++..+
T Consensus 262 l~~~A~~~~Ip~-Q~~~~~ggGTDa~~~~~~~~Giptv~ig~p~r---y~Hs~~E~v~~~D~~~~~~Ll~~~i~~l 333 (344)
T PRK09961 262 IETVAAEIGIPL-QADMFSNGGTDGGAVHLTGTGVPTVVMGPATR---HGHCAASIADCRDILQMIQLLSALIQRL 333 (344)
T ss_pred HHHHHHHcCCCc-EEEecCCCcchHHHHHHhCCCCCEEEechhhh---cccChhheEEHHHHHHHHHHHHHHHHHc
Confidence 667776666443 32222 36799997765 6999999999865 5999999999999999999999998665
No 70
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.60 E-value=2.5e-13 Score=132.20 Aligned_cols=149 Identities=15% Similarity=0.205 Sum_probs=109.5
Q ss_pred HHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCC------
Q 013216 32 ERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE------ 105 (447)
Q Consensus 32 ~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~------ 105 (447)
++|++|+++|++| +.|.++++++.++|++++.+++. + +..|+++.++|...+.|+|+|.||||+|+.-
T Consensus 2 ~~L~~L~~~~gpS--G~E~~v~~~i~~~l~~~~~~v~~-D---~~GNvia~~~g~~~~~~~vml~AHmDeVGf~V~~I~~ 75 (350)
T TIGR03107 2 NKIKEVTELQGTS--GFEHPIRDYLRQDITPLVDQVET-D---GLGGIFGIKESQVENAPRVMVAAHMDEVGFMVSQIKP 75 (350)
T ss_pred hHHHHHHhCCCCC--CCcHHHHHHHHHHHHhhCCEEEE-C---CCCCEEEEecCCCCCCCEEEEEecccEeCEEEEEECC
Confidence 5699999999985 89999999999999999987664 3 3449999987641234799999999999210
Q ss_pred -------C-CCCC-------------cC--CCcee-------------------------eC------------------
Q 013216 106 -------P-SKWS-------------HH--PFGAH-------------------------LD------------------ 119 (447)
Q Consensus 106 -------~-~~W~-------------~~--Pf~~~-------------------------~~------------------ 119 (447)
+ .+|. .+ ++.+. ++
T Consensus 76 ~G~l~~~~vGG~~~~~l~gq~V~i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~IDiGa~skee~~~~GI~vGd 155 (350)
T TIGR03107 76 DGTFRVVELGGWNPLVVSSQRFTLFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDILFDGGFTNKDEAWSFGVRPGD 155 (350)
T ss_pred CceEEEEeCCCccccccCCcEEEEEeCCCCEEEEEEeCCcccccChhhcccccCChhhEEEEeCCCCHHHHHhcCCCCCC
Confidence 0 1110 11 10000 00
Q ss_pred ------------CCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCce
Q 013216 120 ------------SQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNV 187 (447)
Q Consensus 120 ------------~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~ 187 (447)
.++++.||+ .|++.++++++.+++.|.+. +++.+++++|+..||.|. .|++..... ++ .|+
T Consensus 156 ~v~~~~~~~~~~~~~~i~~ka-lDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~-rGA~~aa~~--i~-pD~ 228 (350)
T TIGR03107 156 VIVPQTETILTANGKNVISKA-WDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGL-RGAHVSTTK--FN-PDI 228 (350)
T ss_pred EEEECCCeEEEcCCCEEEEec-cccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCc-hhhhhHHhh--CC-CCE
Confidence 235677777 89999999999999999865 467899999999999995 799876442 32 478
Q ss_pred EEEEec
Q 013216 188 GIVLDE 193 (447)
Q Consensus 188 ~~~~d~ 193 (447)
+|++|.
T Consensus 229 aI~vDv 234 (350)
T TIGR03107 229 FFAVDC 234 (350)
T ss_pred EEEEec
Confidence 888885
No 71
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.55 E-value=1.2e-12 Score=125.87 Aligned_cols=152 Identities=20% Similarity=0.330 Sum_probs=113.1
Q ss_pred hHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCC--
Q 013216 28 DSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE-- 105 (447)
Q Consensus 28 ~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~-- 105 (447)
++++++|++|..+|+.| +.|.++.+++.+.|++++.+++. + +..|+++.++|.+ +.+.|++.||||++..-
T Consensus 2 ~~~~~~LkeL~~~~gps--G~E~eVr~~~~~el~~~~~ev~~-D---~lGnlia~~~g~~-g~~~imi~AHmDEiG~mV~ 74 (355)
T COG1363 2 EELLELLKELLEAPGPS--GYEEEVRDVLKEELEPLGDEVEV-D---RLGNLIAKKGGKN-GPPKVMIAAHMDEIGFMVK 74 (355)
T ss_pred hHHHHHHHHHHcCCCCC--CcHHHHHHHHHHHHHHhCCceEE-c---CCCcEEEEecCCC-CCccEEEEeecceeeeeEE
Confidence 56789999999999975 89999999999999999998874 3 4459999998832 33669999999999110
Q ss_pred -----------C-CCCCcC---------------CCceee-------------------------C--------------
Q 013216 106 -----------P-SKWSHH---------------PFGAHL-------------------------D-------------- 119 (447)
Q Consensus 106 -----------~-~~W~~~---------------Pf~~~~-------------------------~-------------- 119 (447)
+ .+|... ++.+.+ +
T Consensus 75 ~I~~~G~Lr~~~IGG~~~~~~~gq~v~i~t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI 154 (355)
T COG1363 75 EIEDDGFLRFVPIGGWDPQVLEGQRVTIHTDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGI 154 (355)
T ss_pred EECCCceEEEEEcCCcChhhccCcEEEEEeCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCC
Confidence 0 112100 111110 0
Q ss_pred ---------------CCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccC
Q 013216 120 ---------------SQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNS 184 (447)
Q Consensus 120 ---------------~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~ 184 (447)
.++++-+|. .|+|.++++++.+++.| + +.+++.+++|+|+..||.|. .|++....+ ++
T Consensus 155 ~vGd~v~~~~~~~~l~~~~i~ska-lDdR~gva~lle~lk~l-~-~~~~~~~vy~v~tvqEEVGl-rGA~~~a~~--i~- 227 (355)
T COG1363 155 RVGDFVVFDPRFRELANGRVVSKA-LDDRAGVAALLELLKEL-K-GIELPADVYFVASVQEEVGL-RGAKTSAFR--IK- 227 (355)
T ss_pred CCCCEEEEcCceEEecCCcEEeee-ccchHhHHHHHHHHHHh-c-cCCCCceEEEEEecchhhcc-chhhccccc--cC-
Confidence 346666665 89999999999999999 5 66789999999999999995 788776542 32
Q ss_pred CceEEEEec
Q 013216 185 LNVGIVLDE 193 (447)
Q Consensus 185 ~~~~~~~d~ 193 (447)
.|+++.+|.
T Consensus 228 pd~aiavd~ 236 (355)
T COG1363 228 PDIAIAVDV 236 (355)
T ss_pred CCEEEEEec
Confidence 467777765
No 72
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.53 E-value=3.8e-14 Score=115.79 Aligned_cols=104 Identities=22% Similarity=0.316 Sum_probs=88.3
Q ss_pred eeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhH-HHHHhccccCCCcceeeeeeeecCCCCCCCc
Q 013216 206 YAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQF-DLVKAGLKAEGEVVSVNMAFLKAGTPSPNGF 283 (447)
Q Consensus 206 ~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~-~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~ 283 (447)
++++|..+++|+++|+++|+|.|+.+ ||+..+++++..|..+..... .. .......++++++.+++|.
T Consensus 1 ~g~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~~----~~~~~~~~~~~~~~i~gG~------ 70 (111)
T PF07687_consen 1 IGHRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFRP----EEFFPGPPTLNIGSIEGGT------ 70 (111)
T ss_dssp EEEEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTSTH----HHCTCTSEEEEEEEEEEES------
T ss_pred CcCCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhccccccc----ccccccccceeEeecccCC------
Confidence 57899999999999999999999999 999999999999987643210 00 0112345799999999997
Q ss_pred cccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc
Q 013216 284 VMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP 319 (447)
Q Consensus 284 ~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~ 319 (447)
..|+||++|++++++|+.|.++.+++++.|++.+++
T Consensus 71 ~~n~ip~~a~~~~~~R~~p~~~~~~i~~~i~~~~~~ 106 (111)
T PF07687_consen 71 APNVIPDEATLTVDIRYPPGEDLEEIKAEIEAAVEK 106 (111)
T ss_dssp STTEESSEEEEEEEEEESTCHHHHHHHHHHHHHHHH
T ss_pred cCCEECCEEEEEEEEECCCcchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988863
No 73
>PRK09864 putative peptidase; Provisional
Probab=99.51 E-value=6e-12 Score=122.24 Aligned_cols=145 Identities=19% Similarity=0.254 Sum_probs=108.6
Q ss_pred HHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCC-----
Q 013216 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE----- 105 (447)
Q Consensus 31 ~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~----- 105 (447)
+++|++|+++|++| +.|.++++++.++|++++.+++. + +..|+++.. |. +.++|+|.||||+|+.-
T Consensus 3 ~~~L~~L~~~~g~S--G~E~~v~~~l~~~l~~~~dev~~-D---~~GNli~~~-g~--~~~kvml~AHmDevG~mV~~I~ 73 (356)
T PRK09864 3 IELLQQLCEASAVS--GDEQEVRDILINTLEPCVNEITF-D---GLGSFVARK-GN--KGPKVAVVGHMDEVGFMVTHID 73 (356)
T ss_pred HHHHHHHHcCCCCC--CchHHHHHHHHHHHHHhCCEEEE-C---CCCCEEEEe-CC--CCcEEEEEecccccCEEEEEEC
Confidence 46799999999985 89999999999999999998763 3 344999986 53 33799999999999211
Q ss_pred --------C-CCCC-------------c-C-CCceee------------------------C------------------
Q 013216 106 --------P-SKWS-------------H-H-PFGAHL------------------------D------------------ 119 (447)
Q Consensus 106 --------~-~~W~-------------~-~-Pf~~~~------------------------~------------------ 119 (447)
+ .+|. . . ++.+.+ +
T Consensus 74 ~~G~l~~~~lGG~~~~~l~~q~V~i~t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ee~~~~GV~vGD 153 (356)
T PRK09864 74 ESGFLRFTTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGD 153 (356)
T ss_pred CCCeEEEEeCCCcCccccCCCEEEEEeCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCHHHHHhcCCCCCC
Confidence 0 1221 1 1 122111 0
Q ss_pred -----------CCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCceE
Q 013216 120 -----------SQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVG 188 (447)
Q Consensus 120 -----------~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~ 188 (447)
.++++.||. .|++.++++++.+++.|.+ ++.+++++|+..||.|. .|++..... ++ +|++
T Consensus 154 ~v~~~~~~~~l~~~~i~~ka-lDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvGl-rGA~~aa~~--i~-PDia 224 (356)
T PRK09864 154 FISPEANFACWGEDKVVGKA-LDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVGL-RGAQTSAEH--IK-PDVV 224 (356)
T ss_pred EEEECCCcEEEcCCEEEEEe-CccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcch-HHHHHHHhc--CC-CCEE
Confidence 356677776 8999999999999998854 67899999999999995 799886543 32 4788
Q ss_pred EEEec
Q 013216 189 IVLDE 193 (447)
Q Consensus 189 ~~~d~ 193 (447)
|++|.
T Consensus 225 IavDv 229 (356)
T PRK09864 225 IVLDT 229 (356)
T ss_pred EEEec
Confidence 88885
No 74
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.82 E-value=1.9e-08 Score=105.09 Aligned_cols=147 Identities=27% Similarity=0.337 Sum_probs=109.9
Q ss_pred ChhHHHHHHHhhhcc-cCCCCC-CChhHHHHHHHHHHHHCCCceEE----Eee-----------------cCCCCeEEEE
Q 013216 26 SDDSIIERFRAYLQI-DTSQPN-PDYTNASKFILAQAEALSLESQT----LEF-----------------AKNKPLILLK 82 (447)
Q Consensus 26 ~~~~~~~~l~~l~~i-ps~s~~-~~e~~~~~~i~~~l~~~G~~~~~----~~~-----------------~~~~~nl~~~ 82 (447)
..++.++.+.++.++ |....+ .+|..+.+++.+.+++..-..+. .+. ..+..||+..
T Consensus 55 ~~~rA~~~l~~ls~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~~i~NIvVk 134 (834)
T KOG2194|consen 55 SEARALKDLLSLSAAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQNISNIVVK 134 (834)
T ss_pred HHHHHHHHHHHHHhcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheeeeeeeEEEe
Confidence 456788889999988 544322 35667888888888775322221 111 1244699999
Q ss_pred ecCCCC-CCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEe
Q 013216 83 WPGSNP-QLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSF 161 (447)
Q Consensus 83 ~~g~~~-~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~ 161 (447)
+.+... ....|++.+|+|+||.++ ||.|+..++++||+++|.+.+....+..+|+|+|
T Consensus 135 i~~k~~~~~~~lLlnaHfDSvpt~~---------------------gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLf 193 (834)
T KOG2194|consen 135 ISPKNGNDKNALLLNAHFDSVPTGP---------------------GATDDGSGVASMLEALRVLSKSDKLLTHSVVFLF 193 (834)
T ss_pred cCCCCCCccceeeeeccccccCCCC---------------------CCCcchhHHHHHHHHHHHhhcCCCcccccEEEEe
Confidence 865433 334799999999999874 7788899999999999999998877899999999
Q ss_pred ecCcccCcccCHHHHHcccccc-CCceEEEEecC
Q 013216 162 VPDEEIGGHDGAEKFADSHVFN-SLNVGIVLDEG 194 (447)
Q Consensus 162 ~~~EE~g~~~G~~~~~~~~~~~-~~~~~~~~d~g 194 (447)
-.+||.+ +.|+..++.++.+. .+...+++|.+
T Consensus 194 NgaEE~~-L~gsH~FItQH~w~~~~ka~INLea~ 226 (834)
T KOG2194|consen 194 NGAEESG-LLGSHAFITQHPWSKNIKAVINLEAA 226 (834)
T ss_pred cCcccch-hhhcccceecChhhhhhheEEecccc
Confidence 9999988 58999999976543 35677777753
No 75
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.75 E-value=1.3e-08 Score=90.46 Aligned_cols=86 Identities=28% Similarity=0.385 Sum_probs=67.2
Q ss_pred eEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCccc
Q 013216 92 SILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHD 171 (447)
Q Consensus 92 ~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~ 171 (447)
.|++.||+|+++.. .++ -++.|+.|+..|++++|++++.|.+.+.+++++|+|+|..+||.|. .
T Consensus 2 ~ivi~aH~Ds~~~~--------------~~~-~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl-~ 65 (179)
T PF04389_consen 2 YIVIGAHYDSVGGD--------------ADG-SWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGL-L 65 (179)
T ss_dssp EEEEEEE--BESCC--------------C-T-CSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTS-H
T ss_pred EEEEEeecCCCCCc--------------CCC-cccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCc-c
Confidence 58999999999822 123 6677999999999999999999999877788999999999999985 7
Q ss_pred CHHHHHccc--cccCCceEEEEec
Q 013216 172 GAEKFADSH--VFNSLNVGIVLDE 193 (447)
Q Consensus 172 G~~~~~~~~--~~~~~~~~~~~d~ 193 (447)
|++.++++. ...++.+.+++|.
T Consensus 66 GS~~~~~~~~~~~~~~~~~inlD~ 89 (179)
T PF04389_consen 66 GSRAFVEHDHEELDNIAAVINLDM 89 (179)
T ss_dssp HHHHHHHHHHCHHHHEEEEEEECS
T ss_pred chHHHHHhhhcccccceeEEeccc
Confidence 999999732 2334566788875
No 76
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=98.27 E-value=3.1e-06 Score=80.81 Aligned_cols=67 Identities=28% Similarity=0.375 Sum_probs=54.3
Q ss_pred CCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCceEEEEec
Q 013216 120 SQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDE 193 (447)
Q Consensus 120 ~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~d~ 193 (447)
.++++.||. .|++.++++++.+++.|.+.+ +..+++|+|+..||.|. .|+.....+ + ++|+++++|.
T Consensus 124 ~~~~i~gka-lDdR~g~~~lle~l~~l~~~~--~~~~v~~v~tvqEEvG~-rGA~~aa~~--i-~PD~ai~vD~ 190 (292)
T PF05343_consen 124 GNGRIVGKA-LDDRAGCAVLLELLRELKEKE--LDVDVYFVFTVQEEVGL-RGAKTAAFR--I-KPDIAIAVDV 190 (292)
T ss_dssp TTTEEEETT-HHHHHHHHHHHHHHHHHTTSS---SSEEEEEEESSCTTTS-HHHHHHHHH--H--CSEEEEEEE
T ss_pred CCCEEEEEe-CCchhHHHHHHHHHHHHhhcC--CCceEEEEEEeeeeecC-cceeecccc--c-CCCEEEEEee
Confidence 466688887 899999999999999998864 45999999999999995 799887653 2 2477888875
No 77
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=98.25 E-value=1.6e-05 Score=72.56 Aligned_cols=134 Identities=18% Similarity=0.173 Sum_probs=97.1
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCC-------CCeEEEEecCCCCCCCeEEEeec
Q 013216 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKN-------KPLILLKWPGSNPQLPSILLNSH 98 (447)
Q Consensus 26 ~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~-------~~nl~~~~~g~~~~~~~ill~~H 98 (447)
+..++.+.|.-+. +|.+-++.+..++.++|++.|+.+|+.++.....+. -.|+++++..+ ....+++.+|
T Consensus 49 ~~~~~~~~L~p~l-v~Rvpgs~g~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~~--A~r~lVlach 125 (338)
T KOG3946|consen 49 DWNRLWENLLPIL-VPRVPGSPGSRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDPN--ASRYLVLACH 125 (338)
T ss_pred CHHHHHHhhhhhh-ccccCCCCccHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCCC--cchheeeecc
Confidence 4555666644433 344334677889999999999999999886443321 23899998654 3477999999
Q ss_pred cccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCC----CCceeEEEEeecCcc-------c
Q 013216 99 TDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGF----QPVRSVYLSFVPDEE-------I 167 (447)
Q Consensus 99 ~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~----~~~~~i~~~~~~~EE-------~ 167 (447)
+|+--.. ++. =+|+.|...++|+++..++.|.+.-. .....+.++|.-+|| .
T Consensus 126 ydsk~~p---------------~~~--~vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf~eW~p~ 188 (338)
T KOG3946|consen 126 YDSKIFP---------------GGM--FVGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAFEEWGPE 188 (338)
T ss_pred cccccCC---------------Ccc--eEeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHHhhcCCc
Confidence 9996543 222 23899999999999999999977422 345689999999998 3
Q ss_pred CcccCHHHHHcc
Q 013216 168 GGHDGAEKFADS 179 (447)
Q Consensus 168 g~~~G~~~~~~~ 179 (447)
++.+|++++.++
T Consensus 189 DSlYGsRhLA~~ 200 (338)
T KOG3946|consen 189 DSLYGSRHLAAK 200 (338)
T ss_pred cccchHHHHHHH
Confidence 457899998774
No 78
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=97.56 E-value=0.00024 Score=72.39 Aligned_cols=102 Identities=25% Similarity=0.242 Sum_probs=71.9
Q ss_pred eEEEEecCCCCCCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeE
Q 013216 78 LILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSV 157 (447)
Q Consensus 78 nl~~~~~g~~~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i 157 (447)
|+++++.++......+...+|.|.+-... +++ +..-.+.|+.|+..|++++|++++.|.... ++.+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------a~~--~s~~~~~GA~DNasGva~llEiAr~l~~~~--p~~~v 252 (435)
T COG2234 186 NVAATISGSSQIIEAIIGTAHSDSLGLLG---------AHI--DSVPTGPGADDNASGVAALLELARVLKGNP--PKRTV 252 (435)
T ss_pred EEeeeeecccccceEEEeccCCCceeeec---------ccc--cCCcCCCCcccccHHHHHHHHHHHHHhcCC--CCceE
Confidence 66666665522334566666666665542 112 234445699999999999999999998875 78999
Q ss_pred EEEeecCcccCcccCHHHHHcccc---ccCCceEEEEec
Q 013216 158 YLSFVPDEEIGGHDGAEKFADSHV---FNSLNVGIVLDE 193 (447)
Q Consensus 158 ~~~~~~~EE~g~~~G~~~~~~~~~---~~~~~~~~~~d~ 193 (447)
.|++...||.|. .|+.+++.+.. .......+++|.
T Consensus 253 ~f~~~~aEE~Gl-~GS~~~~~~~~~~~~~~~~~viN~Dm 290 (435)
T COG2234 253 RFVAFGAEESGL-LGSEAYVKRLSKDLDKKIALVINLDM 290 (435)
T ss_pred EEEEecchhhcc-cccHHHHhcCCcchhhhhheEEeccc
Confidence 999999999985 79999998754 222334566663
No 79
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=97.28 E-value=0.00073 Score=71.38 Aligned_cols=82 Identities=24% Similarity=0.295 Sum_probs=63.3
Q ss_pred CCCeEEEEecCCCCCCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHH---HHcCC
Q 013216 75 NKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRL---KASGF 151 (447)
Q Consensus 75 ~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l---~~~~~ 151 (447)
...|++|.++|+.....-|++.+|-|..-.+ +.|...|.+.++...+.+ ++.|+
T Consensus 337 ki~NIig~I~Gs~epD~~ViigahrDSw~~G-----------------------a~dp~sGta~Ll~i~~~~~~~~k~gw 393 (702)
T KOG2195|consen 337 KIQNIIGKIEGSEEPDRYVIIGAHRDSWTFG-----------------------AIDPNSGTALLLEIARALSKLKKRGW 393 (702)
T ss_pred eeeeEEEEEecCcCCCeEEEEeccccccccC-----------------------CcCCCccHHHHHHHHHHHHHHHHcCC
Confidence 3469999999955445789999998885542 555556767666665554 56789
Q ss_pred CCceeEEEEeecCcccCcccCHHHHHccc
Q 013216 152 QPVRSVYLSFVPDEEIGGHDGAEKFADSH 180 (447)
Q Consensus 152 ~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 180 (447)
+|+++|+|+...+||-|. .|+-.+++..
T Consensus 394 rP~RtI~F~sWdAeEfGl-iGStE~~E~~ 421 (702)
T KOG2195|consen 394 RPRRTILFASWDAEEFGL-LGSTEWAEEY 421 (702)
T ss_pred CccceEEEEEccchhccc-cccHHHHHHH
Confidence 999999999999999986 6888888754
No 80
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=97.01 E-value=0.0035 Score=60.94 Aligned_cols=101 Identities=17% Similarity=0.261 Sum_probs=73.0
Q ss_pred CCCeEEEEec-C-----CCCCCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHH
Q 013216 75 NKPLILLKWP-G-----SNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKA 148 (447)
Q Consensus 75 ~~~nl~~~~~-g-----~~~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~ 148 (447)
..+|+.|++. | .+...|+|++.+|+||....|. +--|+.-+..|+.++|..++.+.+
T Consensus 192 ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap~-----------------lsvgADSNGSGvvaLLelarlfSk 254 (555)
T KOG2526|consen 192 KILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAPG-----------------LSVGADSNGSGVVALLELARLFSK 254 (555)
T ss_pred ccceEEeecccccccccccccCCeEEEEEeccccccCCC-----------------CCCCCCCCCccHHHHHHHHHHHHH
Confidence 3468999886 3 2346899999999999987641 111445555788899999999887
Q ss_pred cC----CCCceeEEEEeecCcccCcccCHHHHHcc--cccc-CCceEEEEec
Q 013216 149 SG----FQPVRSVYLSFVPDEEIGGHDGAEKFADS--HVFN-SLNVGIVLDE 193 (447)
Q Consensus 149 ~~----~~~~~~i~~~~~~~EE~g~~~G~~~~~~~--~~~~-~~~~~~~~d~ 193 (447)
.- -..++|+.|+.+.+.-.. ..|.++.++- ..+. .+|+++|+|.
T Consensus 255 ly~ypsTrakYnLlF~lt~aG~lN-yqGTkkWLe~dd~~lq~nVdfaiCLdt 305 (555)
T KOG2526|consen 255 LYDYPSTRAKYNLLFILTAAGKLN-YQGTKKWLEFDDADLQKNVDFAICLDT 305 (555)
T ss_pred HhcCcccccceeEEEEEccCcccc-ccchhhhhhcchHHHHhcccEEEEhhh
Confidence 42 235789999999876654 4799888872 2333 5789999974
No 81
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=95.74 E-value=0.052 Score=50.08 Aligned_cols=71 Identities=18% Similarity=0.176 Sum_probs=57.3
Q ss_pred CeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHc---CCCCceeEEEEeecCccc
Q 013216 91 PSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS---GFQPVRSVYLSFVPDEEI 167 (447)
Q Consensus 91 ~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~---~~~~~~~i~~~~~~~EE~ 167 (447)
|.|++.+.||+...-. +- +.|+.+.-.|++++|+++++|.+. ...++++|.|.|..+|--
T Consensus 1 ~iIlv~armDs~s~F~--------------~~---s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~ 63 (234)
T PF05450_consen 1 PIILVVARMDSFSFFH--------------DL---SPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESF 63 (234)
T ss_pred CEEEEEecccchhccc--------------CC---CCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccc
Confidence 5789999999987641 22 358888889999999999999875 235789999999999999
Q ss_pred CcccCHHHHHcc
Q 013216 168 GGHDGAEKFADS 179 (447)
Q Consensus 168 g~~~G~~~~~~~ 179 (447)
|. .|.+.++.+
T Consensus 64 dY-iGS~R~vyD 74 (234)
T PF05450_consen 64 DY-IGSSRFVYD 74 (234)
T ss_pred cc-cchHHHHHH
Confidence 86 688888764
No 82
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=94.46 E-value=0.048 Score=52.22 Aligned_cols=69 Identities=17% Similarity=0.181 Sum_probs=53.8
Q ss_pred CCChHHHHHHHHHHHhcCCCCCc-eecCCCcchHHHHHc--CCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHH
Q 013216 351 SSNPWWNLLEEAVRKANGKLGKP-EIFPASTDARYFRER--GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDI 423 (447)
Q Consensus 351 ~~~~~~~~~~~a~~~~~~~~~~~-~~~~g~~D~~~~~~~--g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~ 423 (447)
.+..+.+.+.+++++.+.+. +. ....++||+..++.. |+|+..++.... ..|+|.|.++++++...+++
T Consensus 221 ~~~~l~~~l~~~A~~~~Ip~-Q~~~~~~ggTDa~~~~~~~~Gi~t~~i~iP~r---y~Hs~~e~~~~~Di~~~~~L 292 (292)
T PF05343_consen 221 PNPKLVDKLREIAEENGIPY-QREVFSGGGTDAGAIQLSGGGIPTAVISIPCR---YMHSPVEVIDLDDIEATIDL 292 (292)
T ss_dssp SHHHHHHHHHHHHHHTT--E-EEEEESSSSSTHHHHHTSTTSSEEEEEEEEEB---STTSTTEEEEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCe-EEEecCCcccHHHHHHHcCCCCCEEEEecccc---cCCCcceEEEHHHHHHHhhC
Confidence 35689999999999988765 33 344689999999865 899887775544 38999999999999988764
No 83
>PRK02256 putative aminopeptidase 1; Provisional
Probab=92.64 E-value=0.23 Score=50.58 Aligned_cols=74 Identities=14% Similarity=0.205 Sum_probs=60.1
Q ss_pred CChHHHHHHHHHHHhcCCCCCce-e----c-CCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHH
Q 013216 352 SNPWWNLLEEAVRKANGKLGKPE-I----F-PASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYE 425 (447)
Q Consensus 352 ~~~~~~~~~~a~~~~~~~~~~~~-~----~-~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~ 425 (447)
+..+...+.+++++.+.+. +.. . . +|+||+-.+++.|+|++-+|.... ..|++.|-+..+|+...++++.
T Consensus 381 ~~~~~~~i~~iA~~~~Ip~-Q~~~~~r~d~~~GgTig~~~s~~Gi~tvdiGiP~l---~MHS~rE~~~~~D~~~~~~ll~ 456 (462)
T PRK02256 381 NAEFVAEVRNLFNKNNVVW-QTAELGKVDQGGGGTIAKFLANYGMEVIDCGVALL---SMHSPFEIASKADIYETYKAYK 456 (462)
T ss_pred CHHHHHHHHHHHHHcCCCE-EEEEeecCCCCCcChHHHHHcCCCCcEEEechhhh---ccccHHHHhhHHHHHHHHHHHH
Confidence 6678888999999887765 332 2 2 579998888878999999987766 4999999999999999999888
Q ss_pred HHHH
Q 013216 426 SIIK 429 (447)
Q Consensus 426 ~~l~ 429 (447)
.++.
T Consensus 457 ~f~~ 460 (462)
T PRK02256 457 AFLE 460 (462)
T ss_pred HHHh
Confidence 7653
No 84
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=90.91 E-value=0.72 Score=44.43 Aligned_cols=73 Identities=21% Similarity=0.146 Sum_probs=49.3
Q ss_pred CeEEEEecCCCCCCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCcee
Q 013216 77 PLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRS 156 (447)
Q Consensus 77 ~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~ 156 (447)
+|+++.-.+ ....+++.+|+|+=-.+ ..|+-.|++..+.++..|..++ ..
T Consensus 179 y~~Ia~~~~---en~vv~i~AH~DHW~~G-----------------------~tDN~lg~~~AV~~~~~lr~~~----~~ 228 (486)
T COG4882 179 YNVIAVDGG---ENGVVLIGAHLDHWYTG-----------------------FTDNILGVAQAVETAGRLRGRG----LA 228 (486)
T ss_pred EEEEEecCC---CCCceEEeechhhhhhc-----------------------ccchhhhHHHHHHHHHHHhhcC----cc
Confidence 356655322 23689999999985543 3455569999999999988775 35
Q ss_pred EEEEeecCcccCcc--------cCHHHHHcc
Q 013216 157 VYLSFVPDEEIGGH--------DGAEKFADS 179 (447)
Q Consensus 157 i~~~~~~~EE~g~~--------~G~~~~~~~ 179 (447)
+.++..++||.|+. -|++.++++
T Consensus 229 ~~lv~FtAEE~g~p~~~sfyWa~GSr~~lk~ 259 (486)
T COG4882 229 AGLVVFTAEEHGMPGMASFYWAAGSRGLLKE 259 (486)
T ss_pred eeEEEEeccccCCCCCcceeecccchHHHhh
Confidence 66777778998752 255666654
No 85
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=89.77 E-value=5.9 Score=40.62 Aligned_cols=125 Identities=15% Similarity=0.101 Sum_probs=76.6
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeec----CCCCeEEEEecCCCCCCCeEEEeeccccCCCC
Q 013216 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFA----KNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (447)
Q Consensus 30 ~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~----~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~ 105 (447)
.+.+.|+|++-|.-- -.-...++++.+.+++.|++++.++.. .+...+++.=+|+.. .|.++...+...-+
T Consensus 156 ~~~~aRdL~n~P~n~--~tP~~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~-~p~lv~l~Y~g~~~-- 230 (468)
T cd00433 156 GVNLARDLVNTPAND--LTPTYLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSEE-PPRLIVLEYKGKGA-- 230 (468)
T ss_pred HHHHHHHhhcCCccc--CCHHHHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCCC-CCEEEEEEECCCCC--
Confidence 456678888888731 344678999999999999999987642 244456666566643 35555444432211
Q ss_pred CCCCCcCCCceeeCCCCcEEecCc---------ccc---hhHHHHHHHHHHHHHHcCCCCceeEEEEeecCccc
Q 013216 106 PSKWSHHPFGAHLDSQGNIFARGS---------QDM---KCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (447)
Q Consensus 106 ~~~W~~~Pf~~~~~~~g~l~GrG~---------~D~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (447)
...|....= .|.-|=-|- .+| ++|.|+.+++++++.+.+ ++.+|+.+....|-.
T Consensus 231 ----~~~~i~LVG--KGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlga~~aia~l~--~~vnV~~i~~~~EN~ 296 (468)
T cd00433 231 ----SKKPIALVG--KGITFDTGGLSLKPAAGMDGMKYDMGGAAAVLGAMKAIAELK--LPVNVVGVLPLAENM 296 (468)
T ss_pred ----CCCcEEEEc--CceEecCCCccccCccChhhccccchhHHHHHHHHHHHHHcC--CCceEEEEEEeeecC
Confidence 011211110 122221111 223 377889999999999986 578999999888864
No 86
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=88.91 E-value=1.1 Score=45.80 Aligned_cols=80 Identities=13% Similarity=0.146 Sum_probs=61.2
Q ss_pred CCCChHHHHHHHHHHHhcCCCCCce----ecCCCcchHHHH--HcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHH
Q 013216 350 DSSNPWWNLLEEAVRKANGKLGKPE----IFPASTDARYFR--ERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDI 423 (447)
Q Consensus 350 ~~~~~~~~~~~~a~~~~~~~~~~~~----~~~g~~D~~~~~--~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~ 423 (447)
..+..+...+++++++.+.+. +.. ..+||++++.+. +.|+|++-+|.... ..|++.|-+...|+...+++
T Consensus 372 ~td~~~~a~i~~la~~~~Ip~-Q~~~~~~d~~~GsTig~i~~s~~Gi~tvDiGiP~l---~MHS~rE~~~~~D~~~~~~l 447 (465)
T PTZ00371 372 ATNGVTASLLKAIAKKANIPI-QEFVVKNDSPCGSTIGPILSSNLGIRTVDIGIPQL---AMHSIREMCGVVDIYYLVKL 447 (465)
T ss_pred ccCHHHHHHHHHHHHHcCCCE-EEEEecCCCCCcchHHHHHHhCCCCcEEEechhhc---ccccHHHHccHHHHHHHHHH
Confidence 346788889999999987654 221 233577766543 46999999998766 49999999999999999999
Q ss_pred HHHHHHHHHh
Q 013216 424 YESIIKAYAS 433 (447)
Q Consensus 424 ~~~~l~~l~~ 433 (447)
|..++..+..
T Consensus 448 ~~af~~~~~~ 457 (465)
T PTZ00371 448 IKAFFTNYSK 457 (465)
T ss_pred HHHHHHhhhh
Confidence 9988875433
No 87
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=88.03 E-value=5.9 Score=38.10 Aligned_cols=119 Identities=14% Similarity=0.146 Sum_probs=71.4
Q ss_pred HHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeec-----------------CCCCe-EEEEecCCC-CCCC
Q 013216 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFA-----------------KNKPL-ILLKWPGSN-PQLP 91 (447)
Q Consensus 31 ~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~-----------------~~~~n-l~~~~~g~~-~~~~ 91 (447)
+.+.|+|++.|.- .-.-...++++++.++++|++++.++.. ...|. ++.++.|.+ ...+
T Consensus 1 vn~aRdL~n~P~n--~~~P~~~a~~~~~~~~~~~v~v~v~~~~~l~~~gmg~llaVg~gS~~~P~lv~l~Y~g~~~~~~~ 78 (311)
T PF00883_consen 1 VNLARDLVNTPPN--ILTPETFAEYAKELAKKYGVKVEVLDEKELEKLGMGGLLAVGRGSRHPPRLVVLEYKGNGGKSKK 78 (311)
T ss_dssp HHHHHHHHHS-TT--TSSHHHHHHHHHHHHHHCTEEEEEEEHHHHHHTT-HHHHHHHTTSSS--EEEEEEEETSTSTTSE
T ss_pred ChHHHhhhCCChh--hcCHHHHHHHHHHHHhhcCCEEEEEeHHHHHHcCCccEeeecccCCCCCEEEEEEECCCCCCCCc
Confidence 3567889999883 2355688999999999999999877642 01122 334555544 3345
Q ss_pred eEEEeec---cccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCccc
Q 013216 92 SILLNSH---TDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (447)
Q Consensus 92 ~ill~~H---~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (447)
+|+|.|- +|+=-.. ++..+.+. +=-.+++|.|+.+.+++++.+.+ ++.+|+.+....|-.
T Consensus 79 ~i~LVGKGiTFDtGG~~------------lKp~~~M~--~Mk~DM~GAAaV~ga~~aia~lk--~~vnV~~~l~~~EN~ 141 (311)
T PF00883_consen 79 PIALVGKGITFDTGGLS------------LKPSGGME--GMKYDMGGAAAVLGAMRAIAKLK--LPVNVVAVLPLAENM 141 (311)
T ss_dssp EEEEEEEEEEEEE-TTS------------SSCSTTGG--GGGGGGHHHHHHHHHHHHHHHCT---SSEEEEEEEEEEE-
T ss_pred cEEEEcceEEEecCCcc------------CCCCcchh--hcccCcchHHHHHHHHHHHHHcC--CCceEEEEEEccccc
Confidence 6666653 2221110 00011111 11334578899999999999976 568999988888754
No 88
>PRK02813 putative aminopeptidase 2; Provisional
Probab=87.90 E-value=1.1 Score=45.44 Aligned_cols=75 Identities=9% Similarity=0.093 Sum_probs=57.4
Q ss_pred CCChHHHHHHHHHHHhcCCCCCcee----cCCCcchHHHH--HcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHH
Q 013216 351 SSNPWWNLLEEAVRKANGKLGKPEI----FPASTDARYFR--ERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIY 424 (447)
Q Consensus 351 ~~~~~~~~~~~a~~~~~~~~~~~~~----~~g~~D~~~~~--~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~ 424 (447)
.+......+++++++.+.+. +... ++||+|++.+. +.|+|++-+|.... ..|++.|-+..+|+...++++
T Consensus 346 t~~~~~a~~~~ia~~~~Ip~-Q~~v~~~d~~gGstig~i~~s~~Gi~tvdiGiP~l---~MHS~~E~~~~~D~~~~~~l~ 421 (428)
T PRK02813 346 TDAESAAVFKLLCEKAGVPY-QEFVNRSDMPCGSTIGPITAARLGIRTVDVGAPML---AMHSARELAGVKDHAYLIKAL 421 (428)
T ss_pred cCHHHHHHHHHHHHHcCCCE-EEEEecCCCCCccHHHHHHHhCCCCcEEEeChhhc---ccccHHHHccHHHHHHHHHHH
Confidence 36778888899999887654 2222 23677777554 46999999997766 499999999999999999988
Q ss_pred HHHHH
Q 013216 425 ESIIK 429 (447)
Q Consensus 425 ~~~l~ 429 (447)
..++.
T Consensus 422 ~~f~~ 426 (428)
T PRK02813 422 TAFFS 426 (428)
T ss_pred HHHhc
Confidence 77653
No 89
>PRK05015 aminopeptidase B; Provisional
Probab=86.48 E-value=14 Score=36.96 Aligned_cols=126 Identities=17% Similarity=0.151 Sum_probs=71.7
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHC---CCceEEEeec----CCCCeEEEEecCCCCCCCeEEEeeccccC
Q 013216 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEAL---SLESQTLEFA----KNKPLILLKWPGSNPQLPSILLNSHTDVV 102 (447)
Q Consensus 30 ~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~---G~~~~~~~~~----~~~~nl~~~~~g~~~~~~~ill~~H~Dtv 102 (447)
.+.+.|+|++-|.-- -.-...++.+.++++++ +++++.++.. .+...+++.=+|+. .|+.++.-+|.
T Consensus 102 ~~~~aRdLvn~P~n~--ltP~~lA~~a~~~~~~~~~~~v~v~Vl~~~~L~~~gmggilaVgrGS~--~pP~lv~L~Y~-- 175 (424)
T PRK05015 102 IIDWVRDTINAPAEE--LGPEQLAQRAADLICSVAGDAVSYRIIKGEDLREQGYMGIHTVGRGSE--RPPVLLALDYN-- 175 (424)
T ss_pred HHHHHHHHhcCCccc--CCHHHHHHHHHHHHHhhccCceEEEEeeHHHHHHCCCCceeeeeccCC--CCCEEEEEEec--
Confidence 466788899888742 23456777777777776 5777766542 24445666656654 24444333332
Q ss_pred CCCCCCCCcCCCc-eeeCCCCcEEecCc-------------ccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccC
Q 013216 103 PSEPSKWSHHPFG-AHLDSQGNIFARGS-------------QDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG 168 (447)
Q Consensus 103 p~~~~~W~~~Pf~-~~~~~~g~l~GrG~-------------~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g 168 (447)
|.++. ..|.. +-+- .|.-|=-|- +|| +|.|+.+.+++.+.+.+ ++.+|++++...|-.-
T Consensus 176 ~~g~~---~~~v~~aLVG-KGITFDSGG~sLKps~~M~~MK~DM-gGAAaV~ga~~~a~~~~--l~~nV~~il~~aENmi 248 (424)
T PRK05015 176 PTGDP---DAPVYACLVG-KGITFDSGGYSIKPSAGMDSMKSDM-GGAATVTGALALAITRG--LNKRVKLFLCCAENLI 248 (424)
T ss_pred CCCCC---CCCeeEEEec-CceEecCCCccCCCCcCHHHhhcch-hHHHHHHHHHHHHHhcC--CCceEEEEEEecccCC
Confidence 33221 11221 1110 122221111 233 56688888888888875 5789999999988643
No 90
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=81.61 E-value=21 Score=36.68 Aligned_cols=124 Identities=15% Similarity=0.071 Sum_probs=75.2
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeec----CCCCeEEEEecCCCCCCCeEEEeeccccCCCC
Q 013216 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFA----KNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (447)
Q Consensus 30 ~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~----~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~ 105 (447)
.+.+.|+|++.|.-- -.-...++++++.++++|++++.++.. .|...+++.=+|+.. .|.++...+. +..
T Consensus 173 ~~~~aRdL~n~P~n~--~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~-~prli~l~Y~---g~~ 246 (483)
T PRK00913 173 GVNLARDLVNEPPNI--LTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSAN-PPRLIVLEYK---GGK 246 (483)
T ss_pred HHHHHHHhhCCChhh--cCHHHHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCCC-CCeEEEEEEC---CCC
Confidence 456678888888731 244578888899999999999877643 244456666566642 3555544432 110
Q ss_pred CCCCCcCCCce-----eeCCCCcEEecC--ccc---chhHHHHHHHHHHHHHHcCCCCceeEEEEeecCccc
Q 013216 106 PSKWSHHPFGA-----HLDSQGNIFARG--SQD---MKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (447)
Q Consensus 106 ~~~W~~~Pf~~-----~~~~~g~l~GrG--~~D---~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (447)
.|... ++|.+|.=.-.+ -.+ +++|.|+.+++++++.+.+ ++.+|+.+....|-.
T Consensus 247 ------~~i~LVGKGITFDsGG~slKp~~~M~~MK~DM~GAAaVlga~~aia~lk--l~vnV~~v~~l~ENm 310 (483)
T PRK00913 247 ------KPIALVGKGLTFDSGGISLKPAAGMDEMKYDMGGAAAVLGTMRALAELK--LPVNVVGVVAACENM 310 (483)
T ss_pred ------CeEEEEcCceEecCCCccCCCCcChhhcccccHhHHHHHHHHHHHHHcC--CCceEEEEEEeeccC
Confidence 11111 111111100011 022 2377788999999999976 578999999988864
No 91
>PRK02256 putative aminopeptidase 1; Provisional
Probab=80.14 E-value=3 Score=42.63 Aligned_cols=49 Identities=33% Similarity=0.457 Sum_probs=37.7
Q ss_pred CCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHH
Q 013216 121 QGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEK 175 (447)
Q Consensus 121 ~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~ 175 (447)
++.+.|++ -|++.++.+++.++..+. ++...++++++..||.|+ .|+..
T Consensus 251 ~efI~s~r-LDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs-~ga~g 299 (462)
T PRK02256 251 RSLIGAYG-QDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGS-EGNTG 299 (462)
T ss_pred cceeeccc-cccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCC-cchhh
Confidence 55666665 899999999999987653 356789999999999986 45443
No 92
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=73.89 E-value=62 Score=33.74 Aligned_cols=125 Identities=12% Similarity=0.049 Sum_probs=73.5
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceE-EEeec----CCCCeEEEEecCCCCCCCeEEEeeccccCCC
Q 013216 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQ-TLEFA----KNKPLILLKWPGSNPQLPSILLNSHTDVVPS 104 (447)
Q Consensus 30 ~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~-~~~~~----~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~ 104 (447)
.+.+.|+|++-|.-- -.-...++.+.+.+.+.|++++ .++.. .|...+++.=+|+.. .|.++...+ . +.
T Consensus 214 ~vn~ARdLvn~P~N~--ltP~~~Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~~-pPrli~L~Y-~--g~ 287 (569)
T PTZ00412 214 CVNEARNLGNLREDE--GVPQFYAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRH-EPYLVVFEY-I--GN 287 (569)
T ss_pred HHHHHHHhccCChhh--cCHHHHHHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCCC-CCEEEEEEe-C--CC
Confidence 355788899888731 2344778888887888999996 55432 244456666566642 355444433 2 21
Q ss_pred CCCCCCcCCCceeeCCCCcEEecC---------cccch---hHHHHHHHHHHHHHHcCCCCceeEEEEeecCccc
Q 013216 105 EPSKWSHHPFGAHLDSQGNIFARG---------SQDMK---CVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (447)
Q Consensus 105 ~~~~W~~~Pf~~~~~~~g~l~GrG---------~~D~k---~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (447)
.+. ..|....= .|.-|=-| -.+|| +|.|+.+++++++.+.+ ++.+|+.++...|-.
T Consensus 288 ~~~---~~~iaLVG--KGITFDSGGisLKP~~~M~~MK~DMgGAAaVlga~~AiA~Lk--lpvnVv~iiplaENm 355 (569)
T PTZ00412 288 PRS---SAATALVG--KGVTFDCGGLNIKPYGSMETMHSDMMGAATVMCTLKAIAKLQ--LPVNVVAAVGLAENA 355 (569)
T ss_pred CCC---CCcEEEEc--CceEEcCCCCCCCCccChhhhhccchhHHHHHHHHHHHHHcC--CCeEEEEEEEhhhcC
Confidence 110 12222111 12222111 12233 67788999999998875 568999999888864
No 93
>PRK02813 putative aminopeptidase 2; Provisional
Probab=68.67 E-value=5.2 Score=40.57 Aligned_cols=46 Identities=24% Similarity=0.169 Sum_probs=35.2
Q ss_pred CcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCccc---CHH
Q 013216 122 GNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHD---GAE 174 (447)
Q Consensus 122 g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~---G~~ 174 (447)
+.+.|+ .-|++.++.+++.|+..+.+ ...++++++..||.|+ . |+.
T Consensus 226 e~i~s~-~lDnr~~~~~~l~al~~~~~-----~~~~~~~~~d~EEVGs-~~~~GA~ 274 (428)
T PRK02813 226 EFISSG-RLDNLSSCHAGLEALLAAAS-----DATNVLAAFDHEEVGS-ATKQGAD 274 (428)
T ss_pred CEEEEe-cchhHHHHHHHHHHHHhcCC-----CCeEEEEEEecCccCC-CCCcccC
Confidence 344444 48999999999999876532 5789999999999986 4 665
No 94
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=64.58 E-value=13 Score=38.25 Aligned_cols=53 Identities=13% Similarity=0.079 Sum_probs=34.4
Q ss_pred CCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEe-ecCcccCcccCHHH
Q 013216 121 QGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSF-VPDEEIGGHDGAEK 175 (447)
Q Consensus 121 ~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~-~~~EE~g~~~G~~~ 175 (447)
++.+.|++ -|++.++.+++.|+..+.....+....+.+++ +..||+|+ .|+..
T Consensus 242 ~e~i~s~r-lDnr~~~~~~l~al~~~~~~~~~~~~~~~v~~~~d~EEVGs-~ga~G 295 (465)
T PTZ00371 242 EEFISSPR-LDNLGSSFCAFKALTEAVESLGENSSNIRMVCLFDHEEVGS-SSSQG 295 (465)
T ss_pred CCeEEEec-chhHHHHHHHHHHHHhccccccCCCCceEEEEEECCcCCCC-Ccchh
Confidence 55666655 89999999999998876432001223454444 88999986 45543
No 95
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=64.22 E-value=8.8 Score=38.61 Aligned_cols=89 Identities=22% Similarity=0.215 Sum_probs=59.4
Q ss_pred CCCeEEEEecCCCC-CCCeEEEeeccccCCCCC----CCCCcCCCceeeCCCCcEE-ecCcccchhHHHHHHHHHHHHHH
Q 013216 75 NKPLILLKWPGSNP-QLPSILLNSHTDVVPSEP----SKWSHHPFGAHLDSQGNIF-ARGSQDMKCVGMQYLEAIRRLKA 148 (447)
Q Consensus 75 ~~~nl~~~~~g~~~-~~~~ill~~H~Dtvp~~~----~~W~~~Pf~~~~~~~g~l~-GrG~~D~k~~~a~~l~a~~~l~~ 148 (447)
...|+....+.... +...+.|-||+|.||.-. -+...+|..+.++ +.++- .+|+. + .+++.+++.+.-
T Consensus 45 E~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~Dt~~d~~~~~v~-~~~l~~~~Gad-~-i~~~~~~a~L~~--- 118 (414)
T COG2195 45 ELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHDTVPDPIGPNVN-PQILKATLGAD-N-IGLAIGLAVLSP--- 118 (414)
T ss_pred hhccccccccccCCCCeeeEEeeccccccccccccccccccccccccccC-CceeeeccCcc-h-hhhhhHHhhcCc---
Confidence 33455555443321 345678999999999643 2334678888886 88888 67754 4 666666655432
Q ss_pred cCCCCceeEEEEeecCcccCcccCHH
Q 013216 149 SGFQPVRSVYLSFVPDEEIGGHDGAE 174 (447)
Q Consensus 149 ~~~~~~~~i~~~~~~~EE~g~~~G~~ 174 (447)
...++.+.++.+||+++ .|+.
T Consensus 119 ----~~~P~~~~~t~~~ei~~-dGa~ 139 (414)
T COG2195 119 ----EHFPLEVLLTGDEEITT-DGAT 139 (414)
T ss_pred ----ccCCceeeeecceEEec-cCcc
Confidence 36789999999999885 5665
No 96
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=63.44 E-value=92 Score=32.51 Aligned_cols=95 Identities=16% Similarity=0.158 Sum_probs=60.7
Q ss_pred HHHHHHHHCCCceEEEeecC------CCCeEEEEecCC-CCCCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEec
Q 013216 55 FILAQAEALSLESQTLEFAK------NKPLILLKWPGS-NPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFAR 127 (447)
Q Consensus 55 ~i~~~l~~~G~~~~~~~~~~------~~~nl~~~~~g~-~~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~Gr 127 (447)
++...++++|.++....... +..|+++.+++- +.+...++| +||-+.. ++
T Consensus 93 ~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl-----~vP~~~~-------------~~----- 149 (617)
T KOG3566|consen 93 WAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVL-----VVPYGRS-------------SG----- 149 (617)
T ss_pred HHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEE-----EEecccC-------------CC-----
Confidence 46777888898887655421 245999998753 224455665 4665421 11
Q ss_pred CcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccc
Q 013216 128 GSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH 180 (447)
Q Consensus 128 G~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 180 (447)
. +..+++.+++.++.++... -..++|+++++-++ ..|....++.+
T Consensus 150 -~--~~~~v~l~lsla~~f~r~~-yWsKDII~v~~d~~----~~g~~AwLeaY 194 (617)
T KOG3566|consen 150 -S--NSASVALLLSLADYFSRWV-YWSKDIIFVFTDGP----ALGLDAWLEAY 194 (617)
T ss_pred -c--chhHHHHHHHHHHHhcCCe-eecccEEEEEeCCc----cccHHHHHHHh
Confidence 1 1357777777777666554 47899999999663 35888888764
No 97
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=59.73 E-value=1.5e+02 Score=27.53 Aligned_cols=98 Identities=17% Similarity=0.227 Sum_probs=62.8
Q ss_pred EEEEecCC-----CCCCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHH--HHcCC
Q 013216 79 ILLKWPGS-----NPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRL--KASGF 151 (447)
Q Consensus 79 l~~~~~g~-----~~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l--~~~~~ 151 (447)
+-..++|+ +.+.|++-+.|-+=.+...|+ . -|.+ +|..|.++++..|++.+ +++|.
T Consensus 15 vki~ipG~~Gk~~Gg~aptlGIiGRLGgigARP~----------~--iGlV-----SDaDGAi~ala~a~KL~~M~~kGd 77 (276)
T PF06675_consen 15 VKILIPGSNGKSSGGSAPTLGIIGRLGGIGARPE----------R--IGLV-----SDADGAIAALAAALKLLDMQAKGD 77 (276)
T ss_pred EEEEecCccCccCCCCCCeeEEEeeccccccccc----------c--eeee-----ecCchHHHHHHHHHHHHHHHHcCC
Confidence 33455662 345789999888877766531 1 2333 77778888888887765 45788
Q ss_pred CCceeEEEEee--cCc------c---cCcccCHHHHHccccccCCceEEEEec
Q 013216 152 QPVRSVYLSFV--PDE------E---IGGHDGAEKFADSHVFNSLNVGIVLDE 193 (447)
Q Consensus 152 ~~~~~i~~~~~--~~E------E---~g~~~G~~~~~~~~~~~~~~~~~~~d~ 193 (447)
.+++++.+.-- ++- = .++..++..+.+....+..|..+.+|.
T Consensus 78 ~L~GDVii~ThIcp~Apt~PH~PvpFM~sPv~~~~~n~~EV~p~mdAILSiDT 130 (276)
T PF06675_consen 78 VLPGDVIITTHICPDAPTRPHDPVPFMGSPVDMATMNRHEVDPEMDAILSIDT 130 (276)
T ss_pred ccCCcEEEEEecCCCCCCCCCCCcccccCccCHHHHHHhhcCcccceEEEEec
Confidence 89999988643 331 1 223346666666555556788888874
No 98
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=59.52 E-value=1.4e+02 Score=30.91 Aligned_cols=126 Identities=15% Similarity=0.097 Sum_probs=70.6
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCC-CceEEEeec----CCCCeEEEEecCCCCCCCeEEEeeccccCCC
Q 013216 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALS-LESQTLEFA----KNKPLILLKWPGSNPQLPSILLNSHTDVVPS 104 (447)
Q Consensus 30 ~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G-~~~~~~~~~----~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~ 104 (447)
.+.+.|+|++.|.-. -.-.+.++. .+.|++.+ ++++.++.. .|...+++.=+|+. ..|+++..- =-+.
T Consensus 169 ~v~~aRdLvN~P~n~--l~P~~la~~-a~~la~~~~v~veVl~~~~l~~~gmg~llaVg~GS~-~~Prlivl~---y~g~ 241 (485)
T COG0260 169 GVNLARDLVNTPANI--LTPEELAER-AELLAKLGGVKVEVLDEKDLEKLGMGALLAVGKGSA-RPPRLIVLE---YNGK 241 (485)
T ss_pred HHHHHHHHhhCCccc--CCHHHHHHH-HHHHhhcCCceEEEecHHHHHHcCCceeeeeccCCC-CCCeEEEEE---cCCC
Confidence 467889999999842 344566777 66677665 888876543 25556666656653 345555321 1111
Q ss_pred CCCCCCcCCCc-----eeeCCCCcEEecC--cccch---hHHHHHHHHHHHHHHcCCCCceeEEEEeecCccc
Q 013216 105 EPSKWSHHPFG-----AHLDSQGNIFARG--SQDMK---CVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (447)
Q Consensus 105 ~~~~W~~~Pf~-----~~~~~~g~l~GrG--~~D~k---~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (447)
+. ...|.. .++|.+|.=.-.+ =.+|| +|.|+.++++.++.+.+ ++.+++.+....|-.
T Consensus 242 ~~---~~~~iaLVGKGitFDsGGisiKp~~~M~~MK~DMgGAAaV~g~~~a~a~l~--l~vnv~~vl~~~ENm 309 (485)
T COG0260 242 GK---AKKPIALVGKGITFDSGGISIKPAAGMDTMKYDMGGAAAVLGAMRALAELK--LPVNVVGVLPAVENM 309 (485)
T ss_pred CC---CCceEEEEcCceeecCCCcccCCccchhhhhcccchHHHHHHHHHHHHHcC--CCceEEEEEeeeccC
Confidence 10 001110 0111111111111 12233 67788999999999986 568999988888864
No 99
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism]
Probab=59.18 E-value=20 Score=35.75 Aligned_cols=77 Identities=16% Similarity=0.185 Sum_probs=58.0
Q ss_pred CCChHHHHHHHHHHHhcCCCC----CceecCCCcchH-HHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHH
Q 013216 351 SSNPWWNLLEEAVRKANGKLG----KPEIFPASTDAR-YFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYE 425 (447)
Q Consensus 351 ~~~~~~~~~~~a~~~~~~~~~----~~~~~~g~~D~~-~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~ 425 (447)
.|.+.+..+++++++.+.... .-...+|+|-.- +.++.|++++-+|+.-. ..|++.|-....++....+.|.
T Consensus 354 td~~~~a~~~~l~~~~~Vp~Q~f~~~~d~~~Gstigpi~aa~tGi~tIDiG~~~L---sMHS~rE~~g~~D~~~~~~~~~ 430 (437)
T COG1362 354 TDSEGIALLRKLAQKAGVPWQVFVLRNDVPCGSTIGPILAARTGIRTIDIGPALL---SMHSIRELSGSADLYEAYKALS 430 (437)
T ss_pred cCchHHHHHHHHHHHcCCceEEEEecccCCCCcccchhHHhhcCCceeecchhhh---hhccHHHHcchhHHHHHHHHHH
Confidence 378889999999999876541 111223555444 55677999999998877 4999999999999999999888
Q ss_pred HHHHH
Q 013216 426 SIIKA 430 (447)
Q Consensus 426 ~~l~~ 430 (447)
.++..
T Consensus 431 aFf~~ 435 (437)
T COG1362 431 AFFEN 435 (437)
T ss_pred HHHhc
Confidence 77653
No 100
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=57.03 E-value=1.6e+02 Score=30.37 Aligned_cols=126 Identities=13% Similarity=-0.016 Sum_probs=71.9
Q ss_pred HHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeec---C-CCCeEEEEecCCCCCCCeEEEeeccccCCCCC
Q 013216 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFA---K-NKPLILLKWPGSNPQLPSILLNSHTDVVPSEP 106 (447)
Q Consensus 31 ~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~---~-~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~ 106 (447)
..+-++|..-|.-- -.-...++++++++...|+.++..+.. . +...+.+.=+++. ..|.++...|..+-+..
T Consensus 192 ~~lar~l~d~PaN~--Mtp~~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~-~pP~ll~lsY~g~~~~~- 267 (513)
T KOG2597|consen 192 QNLARRLGDTPANR--MTPTQFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASC-EPPRLLELSYKGTSGAD- 267 (513)
T ss_pred HHHHHHhccCChhh--cCHHHHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccC-CCCEEEEEEEcCCCCCc-
Confidence 44455555555421 234578999999999999877654321 1 2222333334443 34667777776654332
Q ss_pred CCCCcCCCceeeCCCCcEEecCc------------ccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCc
Q 013216 107 SKWSHHPFGAHLDSQGNIFARGS------------QDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGG 169 (447)
Q Consensus 107 ~~W~~~Pf~~~~~~~g~l~GrG~------------~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~ 169 (447)
.|+-..- .|.-|--|- .-+++|.|+++++++++.+.+ |+-++.+++.-.|-.-+
T Consensus 268 -----~~i~lvG--KGvtfDsGGl~iK~~~~M~~mr~dm~GAA~v~~~~~a~~~l~--~~in~~~v~plcENm~s 333 (513)
T KOG2597|consen 268 -----KTILLVG--KGVTFDSGGLSIKPKTGMDGMRRDMGGAAVVLGAFRAAAQLS--LPINVHAVLPLCENMPS 333 (513)
T ss_pred -----ceEEEEe--cceEEecCccccccCCChhhhhhhccccHHHHHHHHHHHhcC--CCCceEEEEeeeccCCC
Confidence 1111111 122222221 123467788999999998876 44899999988887543
No 101
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=48.93 E-value=45 Score=32.85 Aligned_cols=64 Identities=20% Similarity=0.165 Sum_probs=40.1
Q ss_pred ecCCCCCCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEee
Q 013216 83 WPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFV 162 (447)
Q Consensus 83 ~~g~~~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~ 162 (447)
++|. ....|+|.+|+..-.-. +|+-+|++.++..++.|++.. .+.+.+|+|.
T Consensus 124 ipG~--s~~EillsthiCHPsmA------------------------NdnLSG~~v~~~La~~L~~~~--~rytYRflf~ 175 (386)
T PF09940_consen 124 IPGE--SDEEILLSTHICHPSMA------------------------NDNLSGPAVLTFLAKWLKQLP--NRYTYRFLFV 175 (386)
T ss_dssp E--S--SS-EEEEEEE----S-T------------------------TTTHHHHHHHHHHHHHHTTS----SSEEEEEEE
T ss_pred ecCC--CCCeEEEEEeccCcccc------------------------cccccHHHHHHHHHHHHhcCC--cCceEEEEEc
Confidence 4675 45899999998874432 455689999999999998875 3489999999
Q ss_pred cCcccCcccCHHHHHcc
Q 013216 163 PDEEIGGHDGAEKFADS 179 (447)
Q Consensus 163 ~~EE~g~~~G~~~~~~~ 179 (447)
|+ + .|+-..+.+
T Consensus 176 Pe--T---IGsI~yLsk 187 (386)
T PF09940_consen 176 PE--T---IGSITYLSK 187 (386)
T ss_dssp -T--T---HHHHHHHHH
T ss_pred cc--c---HHHHHHHHH
Confidence 94 2 366655554
No 102
>COG1464 NlpA ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]
Probab=41.44 E-value=63 Score=30.33 Aligned_cols=64 Identities=11% Similarity=0.183 Sum_probs=36.4
Q ss_pred CCccchHHHHHHHHHHHhhhcCCCCChhHHHHHHHhhhcccCCCCCCChhHHHH-HHHHHHHHCCCceEEEeec
Q 013216 1 MRNRHRLLHICFVFYQLIIFSSPAKSDDSIIERFRAYLQIDTSQPNPDYTNASK-FILAQAEALSLESQTLEFA 73 (447)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~~~e~~~~~-~i~~~l~~~G~~~~~~~~~ 73 (447)
|+++.++.+.....+++.+|..+..... +=+.+-..+ ....+..+ ++...+++.|++.+.+++.
T Consensus 1 m~~~~~~~~~~~~~l~~~~~~~~~~~~~-------~~I~vg~~~--~p~a~ile~~~k~~~~k~Gi~l~i~~Ft 65 (268)
T COG1464 1 MKKLKKLALALVALLALAACGAAAAKAT-------KTIKVGATP--GPHAEILEVVVKPALKKKGLDLKIVEFT 65 (268)
T ss_pred CchHHHHHHHHHHHHHHHhhhhhccccC-------CcEEEeecC--CchHHHHHHHHHHHHHhcCceEEEEEec
Confidence 6666665544333333334443333332 344454432 34456666 7777888899999988765
No 103
>PF02127 Peptidase_M18: Aminopeptidase I zinc metalloprotease (M18); InterPro: IPR001948 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M18, (clan MH). The proteins have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal aminoacid, usually neutral or hydrophobic, from a polypeptide []. The type example is aminopeptidase I from Saccharomyces cerevisiae (Baker's yeast), the sequence of which has been deduced, and the mature protein shown to consist of 469 amino acids []. A 45-residue presequence contains both positively- and negatively-charged and hydrophobic residues, which could be arranged in an N-terminal amphiphilic alpha-helix []. The presequence differs from signal sequences that direct proteins across bacterial plasma membranes and endoplasmic reticulum or into mitochondria. It is unclear how this unique presequence targets aminopeptidase I to yeast vacuoles, and how this sorting utilises classical protein secretory pathways [].; GO: 0004177 aminopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1Y7E_A 2GLJ_R 4DYO_A 2IJZ_B 3VAT_A 3VAR_A 2GLF_B.
Probab=37.28 E-value=64 Score=32.81 Aligned_cols=75 Identities=11% Similarity=0.060 Sum_probs=50.8
Q ss_pred CCCChHHHHHHHHHHHhcCCCC----CceecCCCcchHHH-HHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHH
Q 013216 350 DSSNPWWNLLEEAVRKANGKLG----KPEIFPASTDARYF-RERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIY 424 (447)
Q Consensus 350 ~~~~~~~~~~~~a~~~~~~~~~----~~~~~~g~~D~~~~-~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~ 424 (447)
..|......+++++++.+.... .....+|+|-+..+ ++.|++++=+|..-. ..|++.|-....|+...+++|
T Consensus 352 atd~~~~a~~~~i~~~~~ip~Q~f~~r~d~~~GsTiGpi~sa~~gi~tvDiG~P~L---sMHS~rE~~g~~D~~~~~~~~ 428 (432)
T PF02127_consen 352 ATDAASAAVFREICEKAGIPWQEFVNRSDDPGGSTIGPILSARLGIRTVDIGIPQL---SMHSIRETAGKKDIYYLYKAF 428 (432)
T ss_dssp SS-HHHHHHHHHHHHHHH--EEEEESSSTSSS--HHHHHHHHCCTSEEEEEE-EEE---STTSSSEEEEHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCCeEEEEecCCCCCCccHHHHHHHhcCCCEEEechhhh---hcccHHHHhccccHHHHHHHH
Confidence 3355667778888888765431 11233466777665 566999999998776 499999999999999999988
Q ss_pred HHH
Q 013216 425 ESI 427 (447)
Q Consensus 425 ~~~ 427 (447)
..+
T Consensus 429 ~aF 431 (432)
T PF02127_consen 429 KAF 431 (432)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 104
>PRK06925 flagellar motor protein MotS; Reviewed
Probab=31.76 E-value=4e+02 Score=24.33 Aligned_cols=54 Identities=15% Similarity=0.134 Sum_probs=30.6
Q ss_pred CeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHc-CCCCceeEEEEeecC
Q 013216 91 PSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS-GFQPVRSVYLSFVPD 164 (447)
Q Consensus 91 ~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~-~~~~~~~i~~~~~~~ 164 (447)
..|.+.||.|..|.... .|. . +. .....=...+.+.|.+. |+. ...|....-++
T Consensus 149 ~~I~I~GhTD~~~~~~~-----~~~---~-N~----------~LS~~RA~~V~~~L~~~~gv~-~~ri~~~G~G~ 203 (230)
T PRK06925 149 NDIKVEGHTDSRPISTY-----RYP---S-NW----------ELSAARASSVIRYFTSKEKLD-SSRFIAVGYAD 203 (230)
T ss_pred CeEEEEEeCCCCCcccc-----CCc---c-HH----------HHHHHHHHHHHHHHHHccCCC-hHHEEEEeccC
Confidence 36999999999886521 010 0 11 12445556677777775 553 34566554443
No 105
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=30.53 E-value=1.2e+02 Score=31.44 Aligned_cols=39 Identities=10% Similarity=-0.042 Sum_probs=31.0
Q ss_pred ccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEe
Q 013216 287 LQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFE 327 (447)
Q Consensus 287 ~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~ 327 (447)
.--+.+++.+++|+++..+.+++.++|++..+ ..+.+++
T Consensus 353 ~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~--~~g~~~~ 391 (485)
T PRK15026 353 MTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGK--LAGAKTE 391 (485)
T ss_pred EeCCEEEEEEEecCCCchHHHHHHHHHHHHHH--HcCcEEE
Confidence 34478999999999999999999999987764 2344444
No 106
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=28.37 E-value=37 Score=26.48 Aligned_cols=20 Identities=25% Similarity=0.114 Sum_probs=10.4
Q ss_pred CCccchHHHHHHHH-HHHhhh
Q 013216 1 MRNRHRLLHICFVF-YQLIIF 20 (447)
Q Consensus 1 ~~~~~~~~~~~~~~-~~~~~~ 20 (447)
|..|..|||.++++ +++|+.
T Consensus 1 MaSK~~llL~l~LA~lLlisS 21 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLISS 21 (95)
T ss_pred CchhHHHHHHHHHHHHHHHHh
Confidence 77666665544443 344443
No 107
>KOG3374 consensus Cellular repressor of transcription [Transcription]
Probab=27.99 E-value=2.7e+02 Score=24.29 Aligned_cols=16 Identities=13% Similarity=-0.159 Sum_probs=9.9
Q ss_pred CceeEEEEeecCcccC
Q 013216 153 PVRSVYLSFVPDEEIG 168 (447)
Q Consensus 153 ~~~~i~~~~~~~EE~g 168 (447)
+.+.+..+-.++||..
T Consensus 141 lsG~v~k~~~~~~~~~ 156 (210)
T KOG3374|consen 141 LSGQVKKMDPSDKSYQ 156 (210)
T ss_pred ecceEEEeCCcchhhh
Confidence 4567777666666643
No 108
>PRK13883 conjugal transfer protein TrbH; Provisional
Probab=27.07 E-value=4e+02 Score=22.77 Aligned_cols=21 Identities=0% Similarity=-0.135 Sum_probs=17.5
Q ss_pred hhHHHHHHHHHHHHCCCceEE
Q 013216 49 YTNASKFILAQAEALSLESQT 69 (447)
Q Consensus 49 e~~~~~~i~~~l~~~G~~~~~ 69 (447)
.......|.+.|+..|+.+..
T Consensus 62 ~D~Fg~aL~~aLR~~GYaV~e 82 (151)
T PRK13883 62 PDAFGQALVKALRDKGYALLE 82 (151)
T ss_pred CcHHHHHHHHHHHHcCeEEEe
Confidence 347888999999999998864
No 109
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=26.70 E-value=1.6e+02 Score=30.61 Aligned_cols=74 Identities=12% Similarity=0.079 Sum_probs=50.1
Q ss_pred CeEEEEecC-CCCCCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCce
Q 013216 77 PLILLKWPG-SNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVR 155 (447)
Q Consensus 77 ~nl~~~~~g-~~~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~ 155 (447)
.|++|.++. ++++...+++..-++.. ++.. +..+++.+++.++.+++... ..+
T Consensus 4 ~nvy~i~rapR~d~tEaivl~~~~~~~------------------~~~~-------n~~~v~l~lal~~~~~~~~~-wsK 57 (504)
T PF04114_consen 4 TNVYGILRAPRGDGTEAIVLVVPWRDS------------------DGEY-------NAGGVALALALARYFRRQSY-WSK 57 (504)
T ss_pred eEEEEEEecCCCCCceeEEEEEecCCC------------------Cccc-------chhhHHHHHHHHHHhhhchh-hhc
Confidence 489998864 22344567776544321 1111 13588999999999998765 689
Q ss_pred eEEEEeecCcccCcccCHHHHHccc
Q 013216 156 SVYLSFVPDEEIGGHDGAEKFADSH 180 (447)
Q Consensus 156 ~i~~~~~~~EE~g~~~G~~~~~~~~ 180 (447)
+|+|+++.+|. .|++..++.+
T Consensus 58 Dii~l~~~~~~----~g~~awl~~Y 78 (504)
T PF04114_consen 58 DIIFLFTDDEL----AGMQAWLEAY 78 (504)
T ss_pred cEEEEecCCcc----hHHHHHHHHH
Confidence 99999986543 4788888764
No 110
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=23.35 E-value=2.7e+02 Score=28.33 Aligned_cols=78 Identities=15% Similarity=0.282 Sum_probs=43.5
Q ss_pred CChHHHHHHHHHHHhcCCC----CCceecCCCcchHHHH-----------------------------HcCCCeEEEccC
Q 013216 352 SNPWWNLLEEAVRKANGKL----GKPEIFPASTDARYFR-----------------------------ERGLPAIGFSPM 398 (447)
Q Consensus 352 ~~~~~~~~~~a~~~~~~~~----~~~~~~~g~~D~~~~~-----------------------------~~g~p~~~~gp~ 398 (447)
+..+.+.++++....+.+. .....++|-+|++|+. .+.+|++.+||-
T Consensus 435 dq~l~~~i~~~~~~~~e~~G~t~~~~~~FpglSD~S~l~l~~s~~i~a~t~N~P~~~r~~~~P~~~i~~L~iP~iN~Gp~ 514 (553)
T COG4187 435 DQLLHNAIKEAAAGLGEDPGETLIEKPFFPGLSDMSFLGLADSQEIDAVTSNTPGWNRLYDRPSEKIQALNIPTINLGPW 514 (553)
T ss_pred hHHHHHHHHHHHHHhhhccCceeEEeeccCcccccccccccccccccchhcCCcchhhccCCCccccccccCceeecccc
Confidence 4445556666655554332 1223456777777662 224788888887
Q ss_pred CCCCCCCCCCCccccHH-HHHHHHHHHHHHHHHHH
Q 013216 399 ANTPILLHDHNEFLNQA-EYLKGIDIYESIIKAYA 432 (447)
Q Consensus 399 ~~~~~~~H~~~E~v~~~-~l~~~~~~~~~~l~~l~ 432 (447)
+.+ .|++-|++-.. ++..--++...+...++
T Consensus 515 GkD---~HkwtERvy~PYsF~VLP~Lvs~t~~~fL 546 (553)
T COG4187 515 GKD---FHKWTERVYKPYSFEVLPELVSETTEAFL 546 (553)
T ss_pred cCc---HHHHHHHhcCCcchhhhHHHHHHHHHHHh
Confidence 765 89998887543 33333333333334443
No 111
>cd06411 PB1_p51 The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain mo
Probab=23.00 E-value=3.3e+02 Score=20.39 Aligned_cols=37 Identities=14% Similarity=0.232 Sum_probs=29.6
Q ss_pred ceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEe
Q 013216 291 EAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFE 327 (447)
Q Consensus 291 ~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~ 327 (447)
+|++++-+|..++.+...+.+.|.+.+.-......++
T Consensus 4 h~~fTVai~v~~g~~y~~L~~~ls~kL~l~~~~~~LS 40 (78)
T cd06411 4 QCAFTVALRAPRGADVSSLRALLSQALPQQAQRGQLS 40 (78)
T ss_pred EEEEEEEEEccCCCCHHHHHHHHHHHhcCChhhcEEE
Confidence 6889999999999999999999998887333334444
No 112
>COG3002 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.97 E-value=2.8e+02 Score=29.52 Aligned_cols=80 Identities=19% Similarity=0.267 Sum_probs=46.5
Q ss_pred ChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEec
Q 013216 48 DYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFAR 127 (447)
Q Consensus 48 ~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~Gr 127 (447)
.+.+-+.++.+.|+.+|++.. -.|-|++.||- +.=+.+|+.+..+ |
T Consensus 540 T~~Eq~~~a~qaLKmmgLte~--------------------fAp~Vvl~GHg-------SqS~NNPy~aaLd-------C 585 (880)
T COG3002 540 TLDEQAQMAAQALKMMGLTEE--------------------FAPLVVLVGHG-------SQSQNNPYRAALD-------C 585 (880)
T ss_pred chHHHHHHHHHHHHHhCchhh--------------------hCceEEEeccc-------cccCCCchhhhcc-------c
Confidence 355666777888888777443 12556667762 1113567776664 4
Q ss_pred CcccchhHH--HHHHH-------HHHHHHHcCCCCceeEEEEe
Q 013216 128 GSQDMKCVG--MQYLE-------AIRRLKASGFQPVRSVYLSF 161 (447)
Q Consensus 128 G~~D~k~~~--a~~l~-------a~~~l~~~~~~~~~~i~~~~ 161 (447)
|+|...+|. |-.|. +=++|++.|+.++-+.+|+.
T Consensus 586 GACgGaSg~fNArvla~l~N~peVRq~lke~GI~Ipedt~Faa 628 (880)
T COG3002 586 GACGGASGGFNARVLAALCNDPEVRQALKEYGISIPEDTVFAA 628 (880)
T ss_pred ccccCccccccHHHHHHHhCCHHHHHHHHhcCccCCccceeee
Confidence 555433222 22222 23567778888888887765
No 113
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=21.23 E-value=96 Score=26.74 Aligned_cols=34 Identities=6% Similarity=0.194 Sum_probs=27.4
Q ss_pred hhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEee
Q 013216 37 YLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEF 72 (447)
Q Consensus 37 l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~ 72 (447)
|+...|. .++..+++++|...|++.|.++...+.
T Consensus 4 LIlYstr--~GqT~kIA~~iA~~L~e~g~qvdi~dl 37 (175)
T COG4635 4 LILYSTR--DGQTRKIAEYIASHLRESGIQVDIQDL 37 (175)
T ss_pred EEEEecC--CCcHHHHHHHHHHHhhhcCCeeeeeeh
Confidence 4444554 588999999999999999999987664
Done!