Query 013216
Match_columns 447
No_of_seqs 139 out of 1744
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 06:23:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013216.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013216hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfo_A Putative acetylornithin 100.0 3.4E-56 1.2E-60 451.1 35.1 380 23-435 21-431 (433)
2 1vgy_A Succinyl-diaminopimelat 100.0 6.9E-55 2.4E-59 436.0 36.7 375 25-435 3-381 (393)
3 3isz_A Succinyl-diaminopimelat 100.0 3.4E-54 1.2E-58 428.6 40.0 370 28-433 3-376 (377)
4 2f7v_A Aectylcitrulline deacet 100.0 2.4E-53 8.3E-58 421.2 33.3 357 23-430 4-367 (369)
5 3pfe_A Succinyl-diaminopimelat 100.0 5.8E-53 2E-57 431.3 35.3 389 25-434 14-471 (472)
6 3ct9_A Acetylornithine deacety 100.0 1.1E-52 3.8E-57 414.3 34.9 344 26-431 9-354 (356)
7 1cg2_A Carboxypeptidase G2; me 100.0 6E-53 2.1E-57 421.9 27.9 368 24-433 15-391 (393)
8 2pok_A Peptidase, M20/M25/M40 100.0 5.8E-52 2E-56 425.3 34.1 389 24-431 39-480 (481)
9 3dlj_A Beta-Ala-His dipeptidas 100.0 1.8E-51 6.2E-56 421.8 36.7 394 23-434 20-484 (485)
10 3gb0_A Peptidase T; NP_980509. 100.0 3E-51 1E-55 406.9 33.6 356 26-431 4-371 (373)
11 3rza_A Tripeptidase; phosphory 100.0 4.3E-51 1.5E-55 408.8 34.4 362 22-433 18-393 (396)
12 2zog_A Cytosolic non-specific 100.0 5.8E-51 2E-55 418.0 34.5 392 23-434 15-477 (479)
13 3tx8_A Succinyl-diaminopimelat 100.0 1.8E-50 6E-55 400.8 36.2 352 27-429 12-368 (369)
14 2rb7_A Peptidase, M20/M25/M40 100.0 1.2E-51 4.1E-56 408.1 27.5 348 27-433 5-360 (364)
15 1xmb_A IAA-amino acid hydrolas 100.0 7.6E-51 2.6E-55 409.7 29.9 370 24-435 22-405 (418)
16 3ife_A Peptidase T; metallopep 100.0 2.2E-51 7.4E-56 415.6 26.0 360 26-433 25-432 (434)
17 1ysj_A Protein YXEP; M20 famil 100.0 5.2E-51 1.8E-55 409.1 27.5 364 26-433 30-401 (404)
18 3io1_A Aminobenzoyl-glutamate 100.0 1.8E-50 6.2E-55 409.7 26.1 369 24-435 10-435 (445)
19 3khx_A Putative dipeptidase sa 100.0 1.1E-48 3.8E-53 401.1 29.9 371 22-433 28-490 (492)
20 1fno_A Peptidase T; metallo pe 100.0 5.8E-48 2E-52 388.8 30.1 360 28-437 2-410 (417)
21 2qyv_A XAA-His dipeptidase; YP 100.0 1.3E-47 4.5E-52 393.5 31.1 355 24-433 7-486 (487)
22 3mru_A Aminoacyl-histidine dip 100.0 1.3E-47 4.5E-52 392.8 30.6 368 24-433 10-488 (490)
23 1lfw_A PEPV; hydrolase, dipept 100.0 1.3E-46 4.6E-51 384.7 33.6 370 24-434 10-467 (470)
24 3ram_A HMRA protein; two-domai 100.0 1.5E-45 5.2E-50 367.8 22.3 351 24-435 12-376 (394)
25 3n5f_A L-carbamoylase, N-carba 100.0 4.2E-43 1.4E-47 352.3 30.1 348 26-433 3-407 (408)
26 2v8h_A Beta-alanine synthase; 100.0 4.4E-43 1.5E-47 358.3 29.4 351 24-435 28-449 (474)
27 1z2l_A Allantoate amidohydrola 100.0 2.7E-43 9.2E-48 355.5 26.6 351 26-435 7-413 (423)
28 3t68_A Succinyl-diaminopimelat 100.0 2.5E-37 8.5E-42 292.5 25.0 261 25-432 3-267 (268)
29 4h2k_A Succinyl-diaminopimelat 100.0 3.1E-36 1.1E-40 285.0 25.8 260 27-433 5-268 (269)
30 1q7l_A Aminoacylase-1; catalys 100.0 1.6E-35 5.6E-40 267.1 16.7 192 24-216 6-198 (198)
31 2fvg_A Endoglucanase; TM1049, 99.9 1.5E-27 5.2E-32 233.1 12.9 255 33-433 3-335 (340)
32 2wyr_A Cobalt-activated peptid 99.9 1.1E-24 3.8E-29 212.2 19.6 247 29-431 3-332 (332)
33 1vhe_A Aminopeptidase/glucanas 99.9 6.9E-24 2.4E-28 209.6 22.3 262 27-433 6-354 (373)
34 2wzn_A TET3, 354AA long hypoth 99.9 6.2E-27 2.1E-31 227.6 -6.5 335 31-434 12-350 (354)
35 2gre_A Deblocking aminopeptida 99.9 2.1E-23 7E-28 204.5 17.2 152 26-194 4-243 (349)
36 1y0y_A FRV operon protein FRVX 99.9 7.9E-23 2.7E-27 200.6 17.1 253 30-433 8-350 (353)
37 1vho_A Endoglucanase; structur 99.9 4.6E-21 1.6E-25 187.6 19.1 255 28-435 5-338 (346)
38 3cpx_A Aminopeptidase, M42 fam 99.9 1.2E-21 4E-26 189.5 12.0 250 25-431 14-321 (321)
39 1ylo_A Hypothetical protein SF 99.8 9.7E-20 3.3E-24 178.4 22.4 254 32-432 7-337 (348)
40 1rtq_A Bacterial leucyl aminop 99.8 1E-19 3.4E-24 174.3 11.1 156 24-193 16-180 (299)
41 1tkj_A Aminopeptidase, SGAP; d 99.8 1.6E-19 5.5E-24 171.6 12.1 148 24-194 3-162 (284)
42 3tc8_A Leucine aminopeptidase; 99.8 9E-18 3.1E-22 160.7 16.4 159 23-193 20-201 (309)
43 3gux_A Putative Zn-dependent e 99.7 2E-17 6.9E-22 158.3 15.8 159 23-193 22-204 (314)
44 3kl9_A PEPA, glutamyl aminopep 99.7 1.3E-15 4.5E-20 148.2 20.9 257 29-432 4-345 (355)
45 2afw_A Glutaminyl-peptide cycl 99.7 1.9E-16 6.6E-21 153.3 12.6 138 25-179 28-190 (329)
46 2vpu_A TET3, 354AA long hypoth 99.6 7.2E-14 2.5E-18 135.8 17.7 252 29-432 10-348 (354)
47 4fuu_A Leucine aminopeptidase; 99.5 3E-13 1E-17 129.8 16.1 157 24-192 21-201 (309)
48 3pb6_X Glutaminyl-peptide cycl 99.5 9.2E-14 3.2E-18 133.5 12.1 136 25-179 36-194 (330)
49 4f9u_A CG32412; alpha/beta hyd 99.5 4.8E-13 1.6E-17 128.6 14.5 135 28-181 11-165 (312)
50 1q7l_B Aminoacylase-1; catalys 99.5 2.9E-13 1E-17 104.5 10.1 82 353-435 1-82 (88)
51 4fai_A CG5976, isoform B; alph 99.4 5.7E-13 2E-17 128.8 13.2 148 26-193 36-205 (330)
52 3isx_A Endoglucanase; TM1050, 99.4 9.4E-12 3.2E-16 120.0 18.5 132 29-176 12-219 (343)
53 2ek8_A Aminopeptidase; metallo 99.0 9.5E-10 3.3E-14 109.9 12.3 94 76-193 203-302 (421)
54 3iib_A Peptidase M28; YP_92679 99.0 3.5E-10 1.2E-14 113.7 9.1 109 50-180 203-317 (444)
55 3fed_A Glutamate carboxypeptid 98.7 2.7E-08 9.3E-13 104.4 7.5 94 76-193 312-411 (707)
56 3kas_A Transferrin receptor pr 98.6 4.5E-08 1.6E-12 101.7 8.7 94 76-193 266-366 (640)
57 3k9t_A Putative peptidase; str 96.3 0.014 4.9E-07 56.5 9.4 83 78-193 167-253 (435)
58 3vat_A Dnpep, aspartyl aminope 94.9 0.039 1.3E-06 55.1 6.7 82 351-436 404-491 (496)
59 4eme_A M18 aspartyl aminopepti 94.8 0.053 1.8E-06 54.8 7.3 81 351-435 472-564 (571)
60 2glf_A Probable M18-family ami 94.6 0.055 1.9E-06 53.6 6.9 76 351-430 368-449 (450)
61 1y7e_A Probable M18-family ami 94.1 0.034 1.2E-06 55.3 4.1 74 351-428 377-456 (458)
62 2ijz_A Probable M18-family ami 93.0 0.043 1.5E-06 54.1 2.8 75 351-429 343-423 (428)
63 1tkj_A Aminopeptidase, SGAP; d 92.0 0.61 2.1E-05 43.1 9.2 81 353-434 176-278 (284)
64 2glj_A Probable M18-family ami 90.9 0.11 3.9E-06 51.6 3.0 74 351-428 380-459 (461)
65 3iib_A Peptidase M28; YP_92679 89.8 0.31 1E-05 48.4 5.2 64 375-438 370-437 (444)
66 3tc8_A Leucine aminopeptidase; 85.4 4.4 0.00015 37.8 9.9 77 354-430 221-308 (309)
67 1rtq_A Bacterial leucyl aminop 85.0 1.7 5.9E-05 40.3 6.9 87 353-439 199-294 (299)
68 2ek8_A Aminopeptidase; metallo 84.8 4.8 0.00017 39.3 10.4 75 358-435 326-403 (421)
69 3h8g_F Cytosol aminopeptidase; 82.1 12 0.00039 37.2 11.6 119 30-168 182-324 (497)
70 3pei_A Cytosol aminopeptidase; 80.2 12 0.00041 37.0 10.9 118 30-167 166-307 (486)
71 2glf_A Probable M18-family ami 80.0 2.8 9.6E-05 41.4 6.5 75 27-103 13-97 (450)
72 2glj_A Probable M18-family ami 79.6 0.99 3.4E-05 44.8 3.1 46 123-174 254-299 (461)
73 3kzw_A Cytosol aminopeptidase; 78.8 16 0.00055 36.3 11.3 125 30-167 199-339 (515)
74 1y7e_A Probable M18-family ami 78.7 0.47 1.6E-05 47.1 0.4 48 122-174 247-294 (458)
75 1gyt_A Cytosol aminopeptidase; 76.7 24 0.00081 35.2 12.0 118 31-168 184-327 (503)
76 2ijz_A Probable M18-family ami 76.4 1 3.6E-05 44.2 2.1 49 121-176 226-274 (428)
77 4efd_A Aminopeptidase; structu 76.2 21 0.00071 35.4 11.2 126 29-167 205-346 (522)
78 3fed_A Glutamate carboxypeptid 75.4 22 0.00076 37.1 12.0 47 25-71 22-69 (707)
79 2hc9_A Leucine aminopeptidase 73.5 46 0.0016 32.9 12.9 127 30-168 169-309 (491)
80 1lam_A Leucine aminopeptidase; 71.9 33 0.0011 33.9 11.6 129 30-168 163-307 (484)
81 3kr4_A M17 leucyl aminopeptida 70.7 36 0.0012 33.8 11.4 119 30-167 207-350 (528)
82 4f9u_A CG32412; alpha/beta hyd 66.0 15 0.00052 34.0 7.6 57 378-435 242-301 (312)
83 3jru_B Probable cytosol aminop 64.4 68 0.0023 31.7 12.0 117 30-167 178-318 (490)
84 3gux_A Putative Zn-dependent e 58.6 31 0.001 32.1 8.2 77 354-430 224-312 (314)
85 4fuu_A Leucine aminopeptidase; 54.8 61 0.0021 29.8 9.6 76 354-429 222-306 (309)
86 2jvf_A De novo protein M7; tet 53.8 26 0.00089 24.3 4.9 65 290-370 15-80 (96)
87 3vat_A Dnpep, aspartyl aminope 52.4 8.4 0.00029 38.3 3.3 40 26-67 31-70 (496)
88 3ij3_A Cytosol aminopeptidase; 51.6 22 0.00075 35.0 6.0 123 30-167 169-306 (482)
89 4fai_A CG5976, isoform B; alph 49.5 38 0.0013 31.6 7.3 53 379-432 268-323 (330)
90 3pb6_X Glutaminyl-peptide cycl 49.3 39 0.0013 31.6 7.2 55 378-433 272-329 (330)
91 3k9t_A Putative peptidase; str 41.2 1.1E+02 0.0038 29.5 9.0 56 377-432 294-354 (435)
92 2afw_A Glutaminyl-peptide cycl 39.5 67 0.0023 29.8 7.3 54 379-433 272-328 (329)
93 4eme_A M18 aspartyl aminopepti 21.7 2.2E+02 0.0077 28.6 7.7 68 33-102 9-91 (571)
No 1
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=3.4e-56 Score=451.12 Aligned_cols=380 Identities=17% Similarity=0.239 Sum_probs=311.7
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEee------------------cCCCCeEEEEec
Q 013216 23 PAKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEF------------------AKNKPLILLKWP 84 (447)
Q Consensus 23 ~~~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~------------------~~~~~nl~~~~~ 84 (447)
.+.+.+++++++++|++|||+| ++|.+++++|.++|+++|++++..+. .++++||++.++
T Consensus 21 i~~~~~~~~~~l~~l~~~ps~s--~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~~~ 98 (433)
T 3pfo_A 21 VDRNFNDQVAFLQRMVQFRSVR--GEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATAD 98 (433)
T ss_dssp HHHHHHHHHHHHHHHHTSCCBT--TCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGCEEEEEEEC
T ss_pred HHhhHHHHHHHHHHHhcCCCCC--CCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCCcEEEEEEe
Confidence 3456788999999999999985 78899999999999999999886542 246789999998
Q ss_pred CCCCCCCeEEEeeccccCCCCC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeec
Q 013216 85 GSNPQLPSILLNSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVP 163 (447)
Q Consensus 85 g~~~~~~~ill~~H~Dtvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 163 (447)
|.. .+|+|+|+|||||||.++ +.|+++||.++++ +|++||||++|||++++++|.|++.|.+.+.+++++|.|+|++
T Consensus 99 g~~-~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~-~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~ 176 (433)
T 3pfo_A 99 SDG-KGRSLILQGHIDVVPEGPVDLWSDPPYEAKVR-DGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDARVHVQTVT 176 (433)
T ss_dssp CCC-CSCCEEEEEECCBCCCCCGGGCSSCTTTCCEE-TTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSCEEEEEES
T ss_pred cCC-CCCEEEEEcccCCcCCCCcccCCCCCCCcEEE-CCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCccEEEEEEe
Confidence 744 458999999999999987 7999999999997 9999999999999999999999999999887788999999999
Q ss_pred CcccCcccCHHHHHccccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHH
Q 013216 164 DEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIE 242 (447)
Q Consensus 164 ~EE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~ 242 (447)
+||.|+ .|++.+++++. +.|++++.+ |+. ..++.+.+|..+++|+++|+++|+|.|+.| ||+..+++++.
T Consensus 177 ~EE~g~-~G~~~~~~~~~--~~d~~i~~e-----p~~-~~i~~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~i~ 247 (433)
T 3pfo_A 177 EEESTG-NGALSTLMRGY--RADACLIPE-----PTG-HTLTRAQVGAVWFRLRVRGTPVHVAYSETGTSAILSAMHLIR 247 (433)
T ss_dssp CTTTTC-HHHHHHHHTTC--CCSEEEECC-----CCS-SCEEEEECEEEEEEEEEECCCCBGGGGGGSCCHHHHHHHHHH
T ss_pred cCccCC-hhHHHHHhcCC--CCCEEEEeC-----CCC-CceEEecceEEEEEEEEEcCCCccCCCCcCcCHHHHHHHHHH
Confidence 999976 59999887643 467777764 544 478899999999999999999999999988 99999999999
Q ss_pred HHHhchhhhHHHHH-hc-cccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccC
Q 013216 243 SVRRFRASQFDLVK-AG-LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA 320 (447)
Q Consensus 243 ~l~~~~~~~~~~~~-~~-~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~ 320 (447)
.|+.+.....+... .+ .......++++++.+++|. +.|+||++|++.+++|++|.++.+++.++|+++++..
T Consensus 248 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~gG~------~~NvIP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~~ 321 (433)
T 3pfo_A 248 AFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGGD------WASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLADA 321 (433)
T ss_dssp HHHHHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEECS------CTTBCCCEEEEEEEEEECTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccCccccccCCCceEEeeeEECCC------CCcccCcEEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 99876542211100 00 0001223589999999987 8999999999999999999999999999999888632
Q ss_pred C--C------CceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHH-cCCC
Q 013216 321 S--R------NMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRE-RGLP 391 (447)
Q Consensus 321 ~--~------~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~-~g~p 391 (447)
. . .++++ +. ....|++ ..+.++++++.+.+++++..+..+.+..+.|++|+++|.+ .|+|
T Consensus 322 ~~~~~~~~~~~~~v~---~~-------~~~~p~~-~~~~d~~~~~~~~~a~~~~~G~~~~~~~~~g~~D~~~~~~~~giP 390 (433)
T 3pfo_A 322 QATDSFLSENPAELV---WS-------GFQADPA-VCEPGGVAEDVLTAAHKAAFNAPLDARLSTAVNDTRYYSVDYGIP 390 (433)
T ss_dssp HTTCHHHHHSCCEEE---EE-------EEEECCE-ECCTTCHHHHHHHHHHHHHHSSCCCEEEESSCCTHHHHHHTTCCC
T ss_pred hhhCcccccCCeEEE---Ee-------cccCCcc-cCCCCCHHHHHHHHHHHHHhCCCCceeeeeeeccHHHHHhhCCCC
Confidence 1 1 13333 21 1223443 3556899999999999986443335566789999999988 4999
Q ss_pred eEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhhc
Q 013216 392 AIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASYV 435 (447)
Q Consensus 392 ~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~~~ 435 (447)
++.|||+.. ..|++||+++++++.+++++|+.++..+++..
T Consensus 391 ~v~~Gp~~~---~~H~~~E~i~~~~l~~~~~~~~~~i~~~~~~~ 431 (433)
T 3pfo_A 391 ALCYGPYGQ---GPHAFDERIDLESLRKTTLSIALFVAEWCGLR 431 (433)
T ss_dssp EEECCCCEE---CTTSTTCEEEHHHHHHHHHHHHHHHHHHHCEE
T ss_pred EEEECCCCc---cCCCCCceEEHHHHHHHHHHHHHHHHHHhccC
Confidence 999999843 69999999999999999999999999998653
No 2
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=6.9e-55 Score=435.96 Aligned_cols=375 Identities=19% Similarity=0.273 Sum_probs=300.6
Q ss_pred CChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCC
Q 013216 25 KSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS 104 (447)
Q Consensus 25 ~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~ 104 (447)
.+.+++++++++|++|||+| ++|.+++++|.++|+++|++++.... ++.+|+++.+ |. +.|+|+|+|||||||.
T Consensus 3 l~~~~~~~~l~~lv~~ps~s--~~e~~~~~~l~~~l~~~G~~~~~~~~-~~~~nv~a~~-g~--~~~~i~l~~H~D~Vp~ 76 (393)
T 1vgy_A 3 LTETQSLELAKELISRPSVT--PDDRDCQKLMAERLHKIGFAAEEMHF-GNTKNIWLRR-GT--KAPVVCFAGHTDVVPT 76 (393)
T ss_dssp -CCSHHHHHHHHHHTSCCBT--TCCTTHHHHHHHHHHTTTCEEEECCB-TTBCEEEEEE-CS--SSSEEEEEEECCBCCC
T ss_pred CchHHHHHHHHHHhcCCCCC--CCcHHHHHHHHHHHHHcCCcEEEEec-CCCcEEEEEE-CC--CCCEEEEEcccCCcCC
Confidence 35678999999999999996 67888999999999999998875442 3567999998 65 3589999999999999
Q ss_pred CC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHcccccc
Q 013216 105 EP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFN 183 (447)
Q Consensus 105 ~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~ 183 (447)
++ .+|+++||.+.++ ||++||||++|||++++++|.|++.|++.+.+++++|+|+|+++||+++..|++.+++.....
T Consensus 77 ~~~~~w~~~Pf~~~~~-~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~ 155 (393)
T 1vgy_A 77 GPVEKWDSPPFEPAER-DGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKAR 155 (393)
T ss_dssp CCGGGSSSCTTSCEEE-TTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHT
T ss_pred CCcccCCCCCCceEEE-CCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHhc
Confidence 87 7899999999997 999999999999999999999999999987778999999999999986557999888754332
Q ss_pred --CCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccc
Q 013216 184 --SLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLK 260 (447)
Q Consensus 184 --~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 260 (447)
.+|++++.+.+...+.+ ..+..+.+|..+++|+++|+++|++.|+.| ||+..+++++..|+.+.... ..
T Consensus 156 ~~~~d~~i~~e~~~~~~~g-~~i~~g~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~-------~~ 227 (393)
T 1vgy_A 156 DELIDYCIVGEPTAVDKLG-DMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDE-------GN 227 (393)
T ss_dssp TCCEEEEEECCCCBSSSTT-SEEECEECEEEEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHCCCCC-------CC
T ss_pred CcCCCEEEEeCCCCcccCC-ceeEEeeeeEEEEEEEEEccCcccCCCccCCCHHHHHHHHHHHhhcccccc-------cc
Confidence 24666655432211111 236788999999999999999999999988 99999999999998753210 00
Q ss_pred cCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeecccccccccccc
Q 013216 261 AEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDK 340 (447)
Q Consensus 261 ~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (447)
.....++++++.+++|.. +.|+||++|++.+|+|+.+.++.+++.++|+++++.....++++ +. .
T Consensus 228 ~~~~~~~~~v~~i~gG~~-----~~NviP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~~~~---~~-------~ 292 (393)
T 1vgy_A 228 EYFPPTSFQISNINGGTG-----ATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQ---WS-------C 292 (393)
T ss_dssp SSCCCCEEEEEEEEECCS-----CTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEE---EE-------E
T ss_pred cccCCCeEEEeeEcCCCC-----CCcccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHHhCCCeEEE---Ee-------c
Confidence 111235888999998742 78999999999999999999999999999998887432223333 22 1
Q ss_pred CCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHH
Q 013216 341 FGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKG 420 (447)
Q Consensus 341 ~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~ 420 (447)
...|.. .+++++++.+.+++++..+..+.+..+.|++|++++...++|++.|||+.. ..|++||+++++++.++
T Consensus 293 ~~~p~~---~~~~~l~~~~~~~~~~~~g~~~~~~~~~g~~D~~~~~~~~~P~v~~Gp~~~---~~H~~~E~i~~~~l~~~ 366 (393)
T 1vgy_A 293 SGQPFL---TQAGKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKAMAQELIELGPSNA---TIHQINENVRLNDIPKL 366 (393)
T ss_dssp EECCEE---CCSSHHHHHHHHHHHHHHSSCCEEECCSCCCTHHHHGGGEEEEEECCSBCT---TTTSTTCEEETTHHHHH
T ss_pred CCCccc---CCCcHHHHHHHHHHHHHcCCCceEecCCccchHHHHHhCCCCEEEECCCCC---CCCCCCCceeHHHHHHH
Confidence 233432 247899999999999975443344566689999999988899999999754 58999999999999999
Q ss_pred HHHHHHHHHHHHhhc
Q 013216 421 IDIYESIIKAYASYV 435 (447)
Q Consensus 421 ~~~~~~~l~~l~~~~ 435 (447)
+++|+.++..+++..
T Consensus 367 ~~~~~~~l~~l~~~~ 381 (393)
T 1vgy_A 367 SAVYEGILVRLLAGN 381 (393)
T ss_dssp HHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHhccC
Confidence 999999999997543
No 3
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=3.4e-54 Score=428.63 Aligned_cols=370 Identities=19% Similarity=0.286 Sum_probs=294.5
Q ss_pred hHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCCC-
Q 013216 28 DSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP- 106 (447)
Q Consensus 28 ~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~- 106 (447)
+++++++++|+++||+| ++|.+++++|.++|+++|++++..+. ++.+|+++.+ |. ++|+|+|+||||+||.++
T Consensus 3 ~~~~~~~~~L~~~ps~s--~~e~~~~~~l~~~l~~~g~~~~~~~~-~~~~n~~a~~-g~--~~~~i~l~aH~D~vp~~~~ 76 (377)
T 3isz_A 3 EKVVSLAQDLIRRPSIS--PNDEGCQQIIAERLEKLGFQIEWMPF-NDTLNLWAKH-GT--SEPVIAFAGHTDVVPTGDE 76 (377)
T ss_dssp HHHHHHHHHHHTSCCBT--TCCTTHHHHHHHHHHHTTCEEEECCB-TTBCEEEEEE-ES--SSCEEEEEEECCBCCCCCG
T ss_pred hHHHHHHHHHhcCCCCC--CChhhHHHHHHHHHHHCCCceEEeec-CCCceEEEEe-CC--CCCEEEEeccccccCCCCc
Confidence 67899999999999996 67889999999999999999886543 3677999988 54 358999999999999987
Q ss_pred CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccc--cC
Q 013216 107 SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVF--NS 184 (447)
Q Consensus 107 ~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~--~~ 184 (447)
+.|+++||.+.++ +|++||||++|||++++++|.|++.|++.+.+++++|+|+|+++||.++..|++.+++.... ..
T Consensus 77 ~~w~~~pf~~~~~-~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~~~~ 155 (377)
T 3isz_A 77 NQWSSPPFSAEII-DGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEK 155 (377)
T ss_dssp GGCSSCTTSCCEE-TTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHTTCC
T ss_pred ccCCCCCCCcEEE-CCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccCccccHHHHHHHHHhcCCC
Confidence 7899999999997 99999999999999999999999999988878899999999999998754599988875332 23
Q ss_pred CceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCC
Q 013216 185 LNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEG 263 (447)
Q Consensus 185 ~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 263 (447)
+|++++.+.....+.+ ..+..+.+|..+++++++|+++|+|.|+.+ ||+..+++++..|+.+.... .....
T Consensus 156 ~d~~~~~e~~~~~~~g-~~i~~g~~g~~~~~i~~~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~-------~~~~~ 227 (377)
T 3isz_A 156 ITYCMVGEPSSAKNLG-DVVKNGRRGSITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDK-------GNEFF 227 (377)
T ss_dssp CCEEEECCCCBSSSTT-SEEEEEECEEEEEEEEEECC-------CGGGCHHHHHHHHHHHHHHCCCCC-------CCSSS
T ss_pred CCEEEEcCCCCcccCC-ceEEEEcceEEEEEEEEEccccccCCCccCcCHHHHHHHHHHHHHhccccc-------ccccc
Confidence 5666665432111111 237789999999999999999999999988 99999999999998753210 01112
Q ss_pred CcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCC
Q 013216 264 EVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGR 343 (447)
Q Consensus 264 ~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (447)
..++++++.+++|.. +.|+||++|++.+|+|+++.++.+++.++|+++++. .+.+++ ++.. ....
T Consensus 228 ~~~~~~v~~i~gg~~-----~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~~~~--~g~~~~---i~~~-----~~~~ 292 (377)
T 3isz_A 228 PPTSLQIANIHAGTG-----SNNVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEK--HNLKYR---IEWN-----LSGK 292 (377)
T ss_dssp CCCEEEEEEEEECCS-----CSSCCCSEEEEEEEEEECTTSCHHHHHHHHHHHHHH--TTCCEE---EEEE-----ECCC
T ss_pred CCceeEEEEEECCCC-----CCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH--cCCCeE---EEEE-----ecCC
Confidence 346889999998752 689999999999999999999999999999988874 344555 3310 1234
Q ss_pred CcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHH
Q 013216 344 PILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDI 423 (447)
Q Consensus 344 p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~ 423 (447)
|.. .+++++++.+.+++++..+..+.+..+.|++|++++...|+|++.|||+.. ..|++||+++++++.+++++
T Consensus 293 p~~---~~~~~l~~~l~~a~~~~~g~~~~~~~~~g~tDa~~~~~~g~~~v~~Gp~~~---~~H~~~E~i~~~~l~~~~~i 366 (377)
T 3isz_A 293 PFL---TKPGKLLDSITSAIEETIGITPKAETGGGTSDGRFIALMGAEVVEFGPLNS---TIHKVNECVSVEDLGKCGEI 366 (377)
T ss_dssp CEE---CCTTHHHHHHHHHHHHHHSCCCEEEECSSCCSHHHHHTTTCEEEECCSBCT---TTTSTTCEEEHHHHHHHHHH
T ss_pred CCc---CCCCHHHHHHHHHHHHHhCCCCeeeccCcccHHHHHHHcCCCEEEECCCCC---cccCCCCcEEHHHHHHHHHH
Confidence 432 446899999999999954333255566789999999999999999999864 59999999999999999999
Q ss_pred HHHHHHHHHh
Q 013216 424 YESIIKAYAS 433 (447)
Q Consensus 424 ~~~~l~~l~~ 433 (447)
|+.++.+|+.
T Consensus 367 ~~~~i~~ll~ 376 (377)
T 3isz_A 367 YHKMLVNLLD 376 (377)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhh
Confidence 9999998864
No 4
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=2.4e-53 Score=421.19 Aligned_cols=357 Identities=19% Similarity=0.217 Sum_probs=286.6
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCC---ChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeecc
Q 013216 23 PAKSDDSIIERFRAYLQIDTSQPNP---DYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHT 99 (447)
Q Consensus 23 ~~~~~~~~~~~l~~l~~ips~s~~~---~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~ 99 (447)
.+.+.+++++++++|++|||+|+.+ +|.+++++|.++|+ |++++..+...+++|+++ ++|+ |+|+|++||
T Consensus 4 ~~~~~~~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~----~~i~l~~H~ 76 (369)
T 2f7v_A 4 MTDLLASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT----PKYLFNVHL 76 (369)
T ss_dssp CCHHHHHHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC----CSEEEEEEC
T ss_pred hhhhhHHHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC----CeEEEEeee
Confidence 4456789999999999999998656 89999999999999 999886654446789999 8764 789999999
Q ss_pred ccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCccc-CcccCHHHHHc
Q 013216 100 DVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI-GGHDGAEKFAD 178 (447)
Q Consensus 100 Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~-g~~~G~~~~~~ 178 (447)
||||.++ .|+++||+++++ ||++||||++|||++++++|.+++. ++++|+|+|+++||+ |+ .|++.+++
T Consensus 77 D~vp~~~-~w~~~pf~~~~~-~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v~~~~~~~EE~~g~-~G~~~~~~ 146 (369)
T 2f7v_A 77 DTVPDSP-HWSADPHVMRRT-EDRVIGLGVCDIKGAAAALVAAANA-------GDGDAAFLFSSDEEANDP-RCIAAFLA 146 (369)
T ss_dssp CBCCCCS-SCSSCTTSCEEC-SSEEECTTTTTTHHHHHHHHHHHTT-------CCCCEEEEEESCTTSSSC-CHHHHHHT
T ss_pred cccCCCC-CCCCCCCCcEEE-CCEEEecccccccHHHHHHHHHHhc-------CCCCEEEEEEeCcccCCC-cCHHHHHh
Confidence 9999975 799999999997 9999999999999999999999875 678999999999998 54 79999998
Q ss_pred cccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCC-CC-CHHHHHHHHHHHHHhchhhhHHHHH
Q 013216 179 SHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLY-DN-SAMENLFKSIESVRRFRASQFDLVK 256 (447)
Q Consensus 179 ~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~-~g-nai~~~~~~i~~l~~~~~~~~~~~~ 256 (447)
++. +.|++++++ |+. ..++.+.+|..+++|+++|+++|+|.|+ .| ||+..+++++..|+.+.... .
T Consensus 147 ~~~--~~d~~i~~e-----~~~-~~i~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~~i~~l~~~~~~~----~ 214 (369)
T 2f7v_A 147 RGL--PYDAVLVAE-----PTM-SEAVLAHRGISSVLMRFAGRAGHASGKQDPAASALHQAMRWGGKALDHVESL----A 214 (369)
T ss_dssp TCC--CCSEEEECC-----CST-TCBBCCBCCEEEEEEEEECCCC------CTTSCHHHHHHHHHHHHHHHHHHT----T
T ss_pred cCC--CCCEEEECC-----CCC-CcceeecCceEEEEEEEeeeCcccCCCCcCCCCHHHHHHHHHHHHHhhhhhh----c
Confidence 754 467777764 443 4678899999999999999999999999 78 99999999999987654211 0
Q ss_pred hccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeecccccccc
Q 013216 257 AGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRAS 336 (447)
Q Consensus 257 ~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~ 336 (447)
.........++++++.+++|. +.|+||++|++.+|+|+++.++.+++.++|+++++.. +++++ ++.
T Consensus 215 ~~~~~~~~~~~~~vg~i~gG~------~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~--~~~~~---~~~--- 280 (369)
T 2f7v_A 215 HARFGGLTGLRFNIGRVDGGI------KANMIAPAAELRFGFRPLPSMDVDGLLATFAGFADPA--AAHFE---ETF--- 280 (369)
T ss_dssp TCEETTEESCEEEEEEEEECS------STTSCCSEEEEEEEEECCTTCCHHHHHHHHHHTCSSC--CSEEE---EEE---
T ss_pred ccccCcccCCceEEEEeecCC------CCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHHHHh--cCceE---EEe---
Confidence 000000001589999999987 8999999999999999999999999999999888643 34555 331
Q ss_pred cccc-CCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHH
Q 013216 337 LHDK-FGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQA 415 (447)
Q Consensus 337 ~~~~-~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~ 415 (447)
. ..+|++ ..+. +++++.+.+++++..+..+. ....|++|+++|.+.|+|++.|||+... ..|++||+++++
T Consensus 281 ---~~~~~~~~-~~~~-~~l~~~~~~a~~~~~g~~~~-~~~~g~~D~~~~~~~g~p~v~~Gpg~~~--~~H~~~E~~~~~ 352 (369)
T 2f7v_A 281 ---RGPSLPSG-DIAR-AEERRLAARDVADALDLPIG-NAVDFWTEASLFSAGGYTALVYGPGDIA--QAHTADEFVTLA 352 (369)
T ss_dssp ---EECCBSCS-SHHH-HHHHHHHHHHHHHHTTCCBC-CCBSSCCTHHHHHHTTCCEEECCSSCGG--GTTCTTCEEEHH
T ss_pred ---ccCCCCcc-CCCC-CHHHHHHHHHHHHhhCCCCC-ccccccCcHHHHhhCCCCEEEECCCCcc--ccCCCCceEEHH
Confidence 1 233443 2233 78999999999987554323 3467899999999999999999997543 699999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 013216 416 EYLKGIDIYESIIKA 430 (447)
Q Consensus 416 ~l~~~~~~~~~~l~~ 430 (447)
++.+++++|+.++..
T Consensus 353 ~l~~~~~~~~~~~~~ 367 (369)
T 2f7v_A 353 QLQRYVESVNRIING 367 (369)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998763
No 5
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=5.8e-53 Score=431.34 Aligned_cols=389 Identities=17% Similarity=0.159 Sum_probs=302.7
Q ss_pred CCh-hHHHHHHHhhhcccCCCCC--------CChhHHHHHHHHHHHHCCCc---eEEEeecCCCCeEEEEecCCCCCCCe
Q 013216 25 KSD-DSIIERFRAYLQIDTSQPN--------PDYTNASKFILAQAEALSLE---SQTLEFAKNKPLILLKWPGSNPQLPS 92 (447)
Q Consensus 25 ~~~-~~~~~~l~~l~~ips~s~~--------~~e~~~~~~i~~~l~~~G~~---~~~~~~~~~~~nl~~~~~g~~~~~~~ 92 (447)
.+. ++++++|++|++|||+|+. ++|.++++++.++|+++|++ ++.++...+++||++.++|. ++|+
T Consensus 14 ~~~~~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~~~g~--~~~~ 91 (472)
T 3pfe_A 14 QQWQEEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEIPGQ--IDDT 91 (472)
T ss_dssp HHHHHTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEEECCS--EEEE
T ss_pred HhhHHHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEEEcCC--CCCe
Confidence 345 7799999999999999853 34889999999999999995 54444333478999999873 4589
Q ss_pred EEEeeccccCCCCCCCCC--cCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcc
Q 013216 93 ILLNSHTDVVPSEPSKWS--HHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGH 170 (447)
Q Consensus 93 ill~~H~Dtvp~~~~~W~--~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~ 170 (447)
|+|+|||||||+. +.|+ ++||++.++ +|++||||++|||++++++|.|++.|++.+..+. +|+|+|+++||+|+
T Consensus 92 i~l~~H~D~vp~~-~~w~~~~~Pf~~~~~-~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~-~v~~~~~~~EE~g~- 167 (472)
T 3pfe_A 92 VLLYGHLDKQPEM-SGWSDDLHPWKPVLK-NGLLYGRGGADDGYSAYASLTAIRALEQQGLPYP-RCILIIEACEESGS- 167 (472)
T ss_dssp EEEEEECCBCCCC-SCCCTTCBTTBCEEE-TTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCE-EEEEEEESCGGGTS-
T ss_pred EEEEccccCCCCc-CCCCcCCCCCceEEE-CCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCC-cEEEEEEeCCCCCC-
Confidence 9999999999996 7899 999999997 9999999999999999999999999999887766 99999999999986
Q ss_pred cCHHHHHccc--cccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEE--eecCCccCCCCCC--CHHHHHHHHHHHH
Q 013216 171 DGAEKFADSH--VFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKA--RGAPGHGAKLYDN--SAMENLFKSIESV 244 (447)
Q Consensus 171 ~G~~~~~~~~--~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v--~G~~~Hs~~p~~g--nai~~~~~~i~~l 244 (447)
.|++.+++++ .+.++|+++++|.+...++ ...+..+.+|..+++++| +|+++|+|.|+.. ||+..+++++..|
T Consensus 168 ~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~i~~g~~G~~~~~~~v~~~G~~~H~~~~~~~~~nai~~~~~~i~~l 246 (472)
T 3pfe_A 168 YDLPFYIELLKERIGKPSLVICLDSGAGNYE-QLWMTTSLRGNLVGKLTVELINEGVHSGSASGIVADSFRVARQLISRI 246 (472)
T ss_dssp TTHHHHHHHHHHHHCCCSEEEEECCBCSCSS-SCEEEEEECEEEEEEEEEESCSSCBCHHHHTTTSCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHhHhhccCCCEEEEeCCCcCCCC-CeeEEEeeeEEEEEEEEEEeCCCCcccCCCCCCCCCHHHHHHHHHHHh
Confidence 6999999875 4556789999986544333 468999999999877555 8999999998754 9999999999999
Q ss_pred Hhchh-----------------hhHHHHHh--------------ccccCC--C---------cceeeeeeeecCCCCCCC
Q 013216 245 RRFRA-----------------SQFDLVKA--------------GLKAEG--E---------VVSVNMAFLKAGTPSPNG 282 (447)
Q Consensus 245 ~~~~~-----------------~~~~~~~~--------------~~~~~~--~---------~~t~~~~~i~~g~~~~~~ 282 (447)
+.+.. ..+..+.. +..... . .++++++.|++|.. ++
T Consensus 247 ~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i~~i~gG~~--~g 324 (472)
T 3pfe_A 247 EDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGADGFPA--IA 324 (472)
T ss_dssp BCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEEEEEESCCC--TT
T ss_pred hCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEEeeeecCcC--CC
Confidence 88720 00000000 000000 0 46899999998731 23
Q ss_pred ccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCC-CCceEeeccccccccccccC-CCCcccccCCCCh-HHHHH
Q 013216 283 FVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPAS-RNMTFELGQFKQRASLHDKF-GRPILTATDSSNP-WWNLL 359 (447)
Q Consensus 283 ~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~-~~~~~ 359 (447)
.+.|+||++|++.+|+|+.+.++.+.+.++|+++++... ++++++ ++. .. .+|++ ..+.+++ +++.+
T Consensus 325 ~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~g~~v~---v~~------~~~~~pp~-~~~~n~~~l~~~~ 394 (472)
T 3pfe_A 325 DAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNPPYNAKVD---FKI------QNGGSKGW-NAPLLSDWLAKAA 394 (472)
T ss_dssp TCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSCGGGCEEE---EEE------CSCCBCCE-ECCCCCHHHHHHH
T ss_pred CCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhCCCCeEEE---EEe------cCCCCCcc-cCCCCChHHHHHH
Confidence 389999999999999999999999999999999887432 456666 442 23 44544 3444566 77999
Q ss_pred HHHHHHhcCCCCCceecCCCcc-h-HHHHHc--CCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhh
Q 013216 360 EEAVRKANGKLGKPEIFPASTD-A-RYFRER--GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASY 434 (447)
Q Consensus 360 ~~a~~~~~~~~~~~~~~~g~~D-~-~~~~~~--g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~~ 434 (447)
.++++++.+..+. ....|++| + ++|.+. |+|.+.+|++..+ ...|+|||+++++++.+++++|+.++..++++
T Consensus 395 ~~a~~~~~G~~~~-~~~~gg~d~f~~~~~~~~Pg~p~v~~G~g~~~-~~~H~p~E~i~~~~l~~g~~~l~~~l~~la~~ 471 (472)
T 3pfe_A 395 SEASMTYYDKPAA-YMGEGGTIPFMSMLGEQFPKAQFMITGVLGPH-SNAHGPNEFLHLDMVKKLTSCVSYVLYSFSQK 471 (472)
T ss_dssp HHHHHHHHSSCCE-EEEESSCCHHHHHHHHHCTTCEEEEECCBCTT-CCTTSTTCEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCce-eccCCCchhhHHHHHHHcCCCCEEEecCCCCC-CCCcCCCcceeHHHHHHHHHHHHHHHHHHhhc
Confidence 9999986544322 23346667 4 677764 7788888876432 26999999999999999999999999998754
No 6
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=1.1e-52 Score=414.27 Aligned_cols=344 Identities=21% Similarity=0.281 Sum_probs=280.6
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCC
Q 013216 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (447)
Q Consensus 26 ~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~ 105 (447)
..+++++++++|++|||+| ++|.+++++|.++|+++|++++.. .+|++++++|.++..|+|+|+|||||||.+
T Consensus 9 ~~~~~~~~~~~l~~~ps~s--~~e~~~~~~l~~~l~~~g~~~~~~-----~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~ 81 (356)
T 3ct9_A 9 MTAEAVSLLKSLISIPSIS--REETQAADFLQNYIEAEGMQTGRK-----GNNVWCLSPMFDLKKPTILLNSHIDTVKPV 81 (356)
T ss_dssp HHHHHHHHHHHHHTSCCBT--TCCHHHHHHHHHHHHHTTCCEEEE-----TTEEEEECSSCCTTSCEEEEEEECCBCCCC
T ss_pred HHHHHHHHHHHHhcCCCCC--CChHHHHHHHHHHHHHCCCeEEEE-----eeeEEEEEecCCCCCCeEEEEccccccCCC
Confidence 4678999999999999996 788899999999999999988753 459999998733335899999999999997
Q ss_pred CCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCccc-CcccCHHHHHccccccC
Q 013216 106 PSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI-GGHDGAEKFADSHVFNS 184 (447)
Q Consensus 106 ~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~-g~~~G~~~~~~~~~~~~ 184 (447)
+ .|+.+||++.++ +|++||||++|||++++++|.|++.|.+.+ ++++|+|+|+++||+ |+ .|++.+++++ .+
T Consensus 82 ~-~w~~~p~~~~~~-~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~~g~-~G~~~~~~~~--~~ 154 (356)
T 3ct9_A 82 N-GWRKDPFTPREE-NGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYLASCEEEVSGK-EGIESVLPGL--PP 154 (356)
T ss_dssp --------CCCEEC-SSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEEEECCGGGTCT-TTHHHHGGGS--CC
T ss_pred C-CCCCCCCccEEE-CCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEeCcccCCc-cCHHHHHhhC--CC
Confidence 5 799999999997 999999999999999999999999999876 789999999999998 64 7999999865 34
Q ss_pred CceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCC
Q 013216 185 LNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEG 263 (447)
Q Consensus 185 ~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 263 (447)
+|++++.+ |+. ..+..+.+|..+++|+++|+++|+|.| .| ||+..+++++..|+.+.... .....
T Consensus 155 ~d~~i~~e-----p~~-~~i~~~~~G~~~~~i~~~G~~~Ha~~p-~g~nAi~~~~~~i~~l~~~~~~~-------~~~~~ 220 (356)
T 3ct9_A 155 VSFAIVGE-----PTE-MQPAIAEKGLMVLDVTATGKAGHAARD-EGDNAIYKVLNDIAWFRDYRFEK-------ESPLL 220 (356)
T ss_dssp CSEEEECC-----SBT-TCCEEEECCCEEEEEEEECBCCBTTSS-CCBCTTGGGHHHHHHHHHCCCSC-------CBTTT
T ss_pred CCEEEEcC-----CCC-ceEEEeeeEEEEEEEEEECCCcccCCC-CCCCHHHHHHHHHHHHHhhhccc-------ccccC
Confidence 67777764 443 457789999999999999999999999 88 99999999999998764311 00011
Q ss_pred CcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCC
Q 013216 264 EVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGR 343 (447)
Q Consensus 264 ~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (447)
..++++++.+++|. +.|+||++|++.+|+|+.+.++.+++.++|+++++. +++ +. ...+
T Consensus 221 ~~~~~~vg~i~gG~------~~NviP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~-----~~~---~~-------~~~~ 279 (356)
T 3ct9_A 221 GPVKMSVTVINAGT------QHNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIAC-----DAK---AR-------SFRL 279 (356)
T ss_dssp BSCEEEEEEEEECS------STTBCCSEEEEEEEEECCTTCCHHHHHHHHHHHCCS-----EEE---ES-------CSCS
T ss_pred CCCcEEeeEEecCC------cCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHhhC-----eEE---Ee-------eccC
Confidence 23689999999987 999999999999999999999999999999988863 444 32 1233
Q ss_pred CcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHH
Q 013216 344 PILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDI 423 (447)
Q Consensus 344 p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~ 423 (447)
|++ ..++++++++.+.++++ .+....|++|++ ..++|++.|||+... ..|++||+++++++.+++++
T Consensus 280 ~~~-~~~~~~~l~~~~~~~~~-------~~~~~~g~tD~~---~~~~p~v~~G~g~~~--~~H~~~E~i~~~~l~~~~~~ 346 (356)
T 3ct9_A 280 NSS-RIDEKHPFVQKAVKMGR-------IPFGSPTLSDQA---LMSFASVKIGPGRSS--RSHTAEEYIMLKEIEEAIGI 346 (356)
T ss_dssp CCE-ECCTTSHHHHHHHHTTC-------CCEEECSCCGGG---GCCSCEEECCSSBGG--GTTSTTCEEEHHHHHHHHHH
T ss_pred CCC-CCCCCCHHHHHHHHHhc-------CCcccccccchh---hcCCCEEEECCCccc--cCcCCCcEEEHHHHHHHHHH
Confidence 443 35568899988877654 234567999999 348999999998543 68999999999999999999
Q ss_pred HHHHHHHH
Q 013216 424 YESIIKAY 431 (447)
Q Consensus 424 ~~~~l~~l 431 (447)
|+.++..+
T Consensus 347 ~~~~~~~~ 354 (356)
T 3ct9_A 347 YLDLLDGL 354 (356)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHHh
Confidence 99988754
No 7
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=6e-53 Score=421.91 Aligned_cols=368 Identities=18% Similarity=0.222 Sum_probs=300.3
Q ss_pred CCChhHHHHHHHhhhcccCCCCCC-ChhHHHHHHHHHHHHCCCceEEEeec--CCCCeEEEEecCCCCCCCeEEEeeccc
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPNP-DYTNASKFILAQAEALSLESQTLEFA--KNKPLILLKWPGSNPQLPSILLNSHTD 100 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~~-~e~~~~~~i~~~l~~~G~~~~~~~~~--~~~~nl~~~~~g~~~~~~~ill~~H~D 100 (447)
+.+.++++++|++|++|||+|... ++.++++||.++|+++|++++..+.. ...+|++++++|.+ .|+|+|+||||
T Consensus 15 ~~~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~--~~~i~l~aH~D 92 (393)
T 1cg2_A 15 TDEQPAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRG--GKNLLLMSHMD 92 (393)
T ss_dssp HHHHHHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSS--CCCEEEEEECC
T ss_pred HhhHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCC--CceEEEEEecC
Confidence 345788999999999999986321 24689999999999999998866532 12469999998653 38999999999
Q ss_pred cCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccc
Q 013216 101 VVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH 180 (447)
Q Consensus 101 tvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 180 (447)
|||+. ..|+..||. ++ +|++||||++|||++++++|.|++.|.+.+.+++++|+|+|+++||+|+ .|++.+++++
T Consensus 93 ~vp~~-~~~~~~Pf~--~~-~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~-~G~~~~~~~~ 167 (393)
T 1cg2_A 93 TVYLK-GILAKAPFR--VE-GDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGS-FGSRDLIQEE 167 (393)
T ss_dssp BSCCT-THHHHSCCE--EE-TTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTT-TTTHHHHHHH
T ss_pred cCCCC-CccccCCee--ee-CCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEcccccCC-ccHHHHHHHH
Confidence 99975 358778998 65 9999999999999999999999999999887788899999999999986 6999998864
Q ss_pred cccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccC-CCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhc
Q 013216 181 VFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGA-KLYDN-SAMENLFKSIESVRRFRASQFDLVKAG 258 (447)
Q Consensus 181 ~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~-~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~ 258 (447)
.. ++|++++++.+.. + ...++.+.+|..+++|+++|+++|+| .|+.| ||+..+++++..|+.+...
T Consensus 168 ~~-~~d~~i~~e~~~~-~--~~~i~~~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~~~~~~-------- 235 (393)
T 1cg2_A 168 AK-LADYVLSFEPTSA-G--DEKLSLGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDDK-------- 235 (393)
T ss_dssp HH-HCSEEEECCCEET-T--SCEEESEECEEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGGCBT--------
T ss_pred hh-cCCEEEEeCCCCC-C--CCcEEEeeeeeEEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHHhhhCc--------
Confidence 33 4678888764320 1 24688899999999999999999996 69988 9999999999999876431
Q ss_pred cccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc-CCCCceEeeccccccccc
Q 013216 259 LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP-ASRNMTFELGQFKQRASL 337 (447)
Q Consensus 259 ~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~~~~~~~ 337 (447)
...++++++.+++|. +.|+||++|++.+|+|+++.++.+.+.++|+++++. ...+++++ ++.
T Consensus 236 ----~~~~~~~v~~i~gG~------~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~---~~~---- 298 (393)
T 1cg2_A 236 ----AKNLRFNWTIAKAGN------VSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQKKLPEADVK---VIV---- 298 (393)
T ss_dssp ----TTTEEEEEEEEEECS------STTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHTSCSSTTCEEE---EEE----
T ss_pred ----ccCceEEEEEEeCCC------CCCEECcccEEEEEEeeCChhhHHHHHHHHHHHHhcccCCCcEEE---EEe----
Confidence 123689999999987 999999999999999999999999999999999874 23456666 442
Q ss_pred cccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCcee-cCCCcchHHHHHcCCCeE-EEccCCCCCCCCCC-CCccccH
Q 013216 338 HDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEI-FPASTDARYFRERGLPAI-GFSPMANTPILLHD-HNEFLNQ 414 (447)
Q Consensus 338 ~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~g~~D~~~~~~~g~p~~-~~gp~~~~~~~~H~-~~E~v~~ 414 (447)
...+|++...+.++++++.+.+++++++... .+.. +.|++|+++|...|+|++ .|||+.. ..|+ |||++++
T Consensus 299 --~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~~~~g~tD~~~~~~~giP~~~~~G~~~~---~~H~~~~E~i~~ 372 (393)
T 1cg2_A 299 --TRGRPAFNAGEGGKKLVDKAVAYYKEAGGTL-GVEERTGGGTDAAYAALSGKPVIESLGLPGF---GYHSDKAEYVDI 372 (393)
T ss_dssp --EECSCCEECHHHHHHHHHHHHHHHHHTTCCC-EEESCBSCCCTHHHHGGGSCCEECCCSCEEE---CTTSSSCCEEEG
T ss_pred --ccccCCccCCcchHHHHHHHHHHHHHhCCCC-ccccCCCcccHHHHHHhCCCCEEEeCCCCCC---CccCCCcceEEe
Confidence 2334443211235789999999998776543 4455 679999999999999998 6888643 5899 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 013216 415 AEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 415 ~~l~~~~~~~~~~l~~l~~ 433 (447)
+++.+++++|..++..+++
T Consensus 373 ~~l~~~~~~~~~~~~~l~~ 391 (393)
T 1cg2_A 373 SAIPRRLYMAARLIMDLGA 391 (393)
T ss_dssp GGHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHHHhc
Confidence 9999999999999999875
No 8
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=5.8e-52 Score=425.32 Aligned_cols=389 Identities=17% Similarity=0.212 Sum_probs=302.7
Q ss_pred CCChh-HHHHHHHhhhcccCCCCC-CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeecccc
Q 013216 24 AKSDD-SIIERFRAYLQIDTSQPN-PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDV 101 (447)
Q Consensus 24 ~~~~~-~~~~~l~~l~~ips~s~~-~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dt 101 (447)
+.+.+ ++++++++|++|||+|+. .++.++++||.++|+++|++++..+. .+.+||+++++|.+++.|+|+|+|||||
T Consensus 39 ~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~-~~~~~v~a~~~g~~~~~~~i~l~aH~D~ 117 (481)
T 2pok_A 39 KDHVAQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDES-YTAPFVMAHFKSSRPDAKTLIFYNHYDT 117 (481)
T ss_dssp HCHHHHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECS-SSSCEEEEEECCSSTTCCEEEEEEECCC
T ss_pred HhhhhHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecC-CCCcEEEEEecCCCCCCCeEEEEEeccC
Confidence 45567 899999999999998742 24589999999999999998876542 3578999999865345689999999999
Q ss_pred CCCCC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccc
Q 013216 102 VPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH 180 (447)
Q Consensus 102 vp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 180 (447)
||.++ +.|+++||.+.++ ||++||||++|||++++++|.|++.|.+.+..++++|+|+|+++||+|+ .|++.+++++
T Consensus 118 vp~~~~~~w~~~pf~~~~~-~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~-~g~~~~~~~~ 195 (481)
T 2pok_A 118 VPADGDQVWTEDPFTLSVR-NGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESAS-TDLDKYLEKH 195 (481)
T ss_dssp CCSCSSCCCSSCTTSCEEE-TTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEEEESCGGGTT-TTHHHHHHHH
T ss_pred cCCCCccccccCCCCceee-CCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccccCc-hhHHHHHHHh
Confidence 99987 6899999999997 9999999999999999999999999999855788999999999999986 6998888764
Q ss_pred --cccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecC--CccCCCCCC-CHHHHHHHHHHHHHhchh------
Q 013216 181 --VFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAP--GHGAKLYDN-SAMENLFKSIESVRRFRA------ 249 (447)
Q Consensus 181 --~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~--~Hs~~p~~g-nai~~~~~~i~~l~~~~~------ 249 (447)
.++++|++++.+.+... .+...+..+.+|..+++|+++|++ +|++.|+.+ ||+..+++++..|+.+..
T Consensus 196 ~~~~~~~d~~i~~~~~~~~-~~~~~i~~~~~G~~~~~i~v~G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~~~~~i~i~g 274 (481)
T 2pok_A 196 ADKLRGADLLVWEQGTKNA-LEQLEISGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEG 274 (481)
T ss_dssp HHHHTTCSEEECSCCBBCT-TSCEEEECCBCEEEEEEEEEECSSSCEEGGGTTTBCCHHHHHHHHHHHTBCTTSCBCCTT
T ss_pred HhhccCCCEEEECCCCccC-CCCeeEEEecceeEEEEEEEecCCCCccccCCCCCCCHHHHHHHHHHHhhCCCCceeccc
Confidence 24436777776543221 112468889999999999999999 899889988 999999999999876430
Q ss_pred ----------hhHHHHHh-------------cc-ccC------------CCcceeeeeeeecCCCCCCCccccccCCceE
Q 013216 250 ----------SQFDLVKA-------------GL-KAE------------GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAE 293 (447)
Q Consensus 250 ----------~~~~~~~~-------------~~-~~~------------~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~ 293 (447)
...+.+.. +. ... ...++++++.|++|.. +..+.|+||++|+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~gG~~--~~~~~NvIP~~a~ 352 (481)
T 2pok_A 275 LYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQ--GQGVKTILPAEAS 352 (481)
T ss_dssp TGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEEEECC--SSSCCCEECSEEE
T ss_pred hhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeeecCCC--CCCCCeeccCeeE
Confidence 00000000 00 000 0136899999998752 1226899999999
Q ss_pred EEEeeecCCCCCHHHHHHHHHHHhccCC-CCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCC
Q 013216 294 AGFDIRVPPTTDAESLERRIVEEWAPAS-RNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGK 372 (447)
Q Consensus 294 ~~~d~R~~~~~~~~~i~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 372 (447)
+.+|+|+.+.++.+.+.++|+++++... .+++++ +. ..+|++ .++.++++++.+.+++++..+..+.
T Consensus 353 ~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~v~---~~--------~~~p~~-~~~~d~~l~~~~~~a~~~~~g~~~~ 420 (481)
T 2pok_A 353 AKLEVRLVPGLEPHDVLEKIRKQLDKNGFDKVELY---YT--------LGEMSY-RSDMSAPAILNVIELAKKFYPQGVS 420 (481)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHHHTTCTTEEEE---EE--------EEECCB-CCCSCSHHHHHHHHHHTTTCTTCEE
T ss_pred EEEEEEeCCCCCHHHHHHHHHHHHHhhCCCceEEE---Ec--------cCCCcc-cCCCCCHHHHHHHHHHHHHcCCCcc
Confidence 9999999999999999999999887432 455555 33 233443 4566899999999999987554321
Q ss_pred ceecCCCc-chHHHHH-cCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHH
Q 013216 373 PEIFPAST-DARYFRE-RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 431 (447)
Q Consensus 373 ~~~~~g~~-D~~~~~~-~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l 431 (447)
.....|++ |+++|.+ .|+|++.|||+... ...|++||+++++++.+++++|+.++..+
T Consensus 421 ~~~~~gg~~D~~~~~~~~g~p~v~~G~g~~~-~~~H~~~E~i~i~~l~~~~~~~~~~l~~l 480 (481)
T 2pok_A 421 VLPTTAGTGPMHTVFDALEVPMVAFGLGNAN-SRDHGGDENVRIADYYTHIELVEELIRSY 480 (481)
T ss_dssp EESCBSSCCTHHHHHHHHCCCEEBCCSBCTT-CCTTSTTCEEEHHHHHHHHHHHHHHHHTT
T ss_pred ccccCCCCCchHHHHHHcCCCEEEecCCCcc-cCCCCCCCcEEHHHHHHHHHHHHHHHHhc
Confidence 22333444 9998865 58999999998621 36999999999999999999999988754
No 9
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=1.8e-51 Score=421.83 Aligned_cols=394 Identities=15% Similarity=0.230 Sum_probs=298.4
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCCC------hhHHHHHHHHHHHHCCCceEEEeec-----CC-----CCeEEEEecCC
Q 013216 23 PAKSDDSIIERFRAYLQIDTSQPNPD------YTNASKFILAQAEALSLESQTLEFA-----KN-----KPLILLKWPGS 86 (447)
Q Consensus 23 ~~~~~~~~~~~l~~l~~ips~s~~~~------e~~~~~~i~~~l~~~G~~~~~~~~~-----~~-----~~nl~~~~~g~ 86 (447)
.+.+.+++++++++|++|||+|.+++ +.++++||.++|+++|++++..+.. .| .+||++.+.+.
T Consensus 20 i~~~~~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~~v~a~~~~~ 99 (485)
T 3dlj_A 20 IDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPVILAELGSD 99 (485)
T ss_dssp HHHTHHHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEECCCEEEEEECCC
T ss_pred HHHhHHHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCCCcEEEEEECCC
Confidence 34578899999999999999933344 6789999999999999998865432 23 36899998643
Q ss_pred CCCCCeEEEeeccccCCCCC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCc
Q 013216 87 NPQLPSILLNSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDE 165 (447)
Q Consensus 87 ~~~~~~ill~~H~Dtvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~E 165 (447)
+++|+|+|+|||||||+++ +.|+.+||++.++ +|++||||++|||++++++|.|++.|.+.+.+++++|+|+|+++|
T Consensus 100 -~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~-~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~E 177 (485)
T 3dlj_A 100 -PTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEV-DGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGME 177 (485)
T ss_dssp -TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEE-TTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCG
T ss_pred -CCCCEEEEEeeecCCCCCCcccCCCCCCccEEE-CCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCccEEEEEEccc
Confidence 3458999999999999986 7899999999997 999999999999999999999999999998888999999999999
Q ss_pred ccCcccCHHHHHcccc---ccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCC--ccCCCCCCCHHHHHHHH
Q 013216 166 EIGGHDGAEKFADSHV---FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPG--HGAKLYDNSAMENLFKS 240 (447)
Q Consensus 166 E~g~~~G~~~~~~~~~---~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~--Hs~~p~~gnai~~~~~~ 240 (447)
|+|+ .|++.+++++. ++++|++++++.+...+ ....++.+.+|..+++|+|+|+++ |+|. ...||+..+..+
T Consensus 178 E~g~-~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~g~~g~~~~~i~v~G~~~~~H~~~-~g~~a~~~~~~l 254 (485)
T 3dlj_A 178 EAGS-VALEELVEKEKDRFFSGVDYIVISDNLWISQ-RKPAITYGTRGNSYFMVEVKCRDQDFHSGT-FGGILHEPMADL 254 (485)
T ss_dssp GGTT-TTHHHHHHHHTTTTSTTCCEEEECCCBCCC---CCEEEEEECEEEEEEEEEESCSSCEETTT-STTSSCCHHHHH
T ss_pred ccCC-ccHHHHHHhhhhhcccCCCEEEEcCCCccCC-CCeeEEEeccceEEEEEEEEECCCCCcCCC-CCccccCHHHHH
Confidence 9986 69999998753 45678888887432211 235788899999999999999999 9987 222666666666
Q ss_pred HHHHHhchhhh-------------------HHHHHh------------cccc------------CCCcceeeeeeeecCC
Q 013216 241 IESVRRFRASQ-------------------FDLVKA------------GLKA------------EGEVVSVNMAFLKAGT 277 (447)
Q Consensus 241 i~~l~~~~~~~-------------------~~~~~~------------~~~~------------~~~~~t~~~~~i~~g~ 277 (447)
+..|+.+.... .+.+.. +... ....++++++.|++|.
T Consensus 255 ~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~i~gG~ 334 (485)
T 3dlj_A 255 VALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAF 334 (485)
T ss_dssp HHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHHTSCEEEEEEEESSC
T ss_pred HHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHhcCCceEEEEEecCC
Confidence 66665553310 000000 0000 0014789999999883
Q ss_pred CCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc--CCCC--ceEeeccccccccccccCCCCcccccCCCC
Q 013216 278 PSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRN--MTFELGQFKQRASLHDKFGRPILTATDSSN 353 (447)
Q Consensus 278 ~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 353 (447)
.++.+.|+||++|++.+++|+.+.++.+.+.++|+++++. ...+ .+++ ++. ...+|++ ..+.++
T Consensus 335 --~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~~~~---v~~------~~~~pp~-~~~~d~ 402 (485)
T 3dlj_A 335 --DEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMV---VSM------TLGLHPW-IANIDD 402 (485)
T ss_dssp --CSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCSSEEE---EEE------EEEECCE-ECCTTS
T ss_pred --cCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccccCCCeeEE---EEE------cCCCCce-eCCCCC
Confidence 1334899999999999999999999999999999988873 2233 3455 332 1233433 355577
Q ss_pred hHHHHHHHHHHHhcCCCCCceecCCCcch-HHHHH-cCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHH
Q 013216 354 PWWNLLEEAVRKANGKLGKPEIFPASTDA-RYFRE-RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 431 (447)
Q Consensus 354 ~~~~~~~~a~~~~~~~~~~~~~~~g~~D~-~~~~~-~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l 431 (447)
++++.+.+++++..+..+....+.|++|+ .+|.+ .++|.+.+|.+... ...|+|||+++++++..++++|+.++..+
T Consensus 403 ~~~~~~~~a~~~~~G~~~~~~~~ggs~Dfa~~~~~~~p~~~i~~g~g~~~-~~~H~p~E~i~~~~l~~g~~~l~~~l~~l 481 (485)
T 3dlj_A 403 TQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVD-DGEHSQNEKINRWNYIEGTKLFAAFFLEM 481 (485)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEEESSCCHHHHHHHHHTC--CEECCCBCTT-CCTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCceecCCCCchhHHHHHHHHhCCCEEEecCCCCC-CCCcCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 99999999999964433233345678896 57765 46677766655321 36999999999999999999999999998
Q ss_pred Hhh
Q 013216 432 ASY 434 (447)
Q Consensus 432 ~~~ 434 (447)
+++
T Consensus 482 a~~ 484 (485)
T 3dlj_A 482 AQL 484 (485)
T ss_dssp HTC
T ss_pred hhc
Confidence 764
No 10
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=3e-51 Score=406.85 Aligned_cols=356 Identities=17% Similarity=0.187 Sum_probs=295.5
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEee----cCCCCeEEEEecCCCCCCCeEEEeecccc
Q 013216 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEF----AKNKPLILLKWPGSNPQLPSILLNSHTDV 101 (447)
Q Consensus 26 ~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~----~~~~~nl~~~~~g~~~~~~~ill~~H~Dt 101 (447)
+.+++++++++|++|||+| ++|.++++||.++|+++|++++.... ..+++|+++.++|++++.|+|+|+||||+
T Consensus 4 ~~~~~~~~l~~l~~~ps~s--~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~ 81 (373)
T 3gb0_A 4 NQERLVNEFMELVQVDSET--KFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDT 81 (373)
T ss_dssp CHHHHHHHHHHHHTSCCBT--TCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCB
T ss_pred CHHHHHHHHHHHhcccCCC--ccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcc
Confidence 6789999999999999985 78999999999999999998875432 12467999999886444699999999999
Q ss_pred CCCCCCCCCcCCCceeeCCCCcEEecCc----ccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHH
Q 013216 102 VPSEPSKWSHHPFGAHLDSQGNIFARGS----QDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFA 177 (447)
Q Consensus 102 vp~~~~~W~~~Pf~~~~~~~g~l~GrG~----~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~ 177 (447)
||+++ ||.+..+ +|++||||+ +|||++++++|.+++.|.+.+. ++++|.|+|+++||.|+ .|++.+.
T Consensus 82 vp~~~------~~~p~~~-~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~-~Ga~~~~ 152 (373)
T 3gb0_A 82 VVPGN------GIKPSIK-DGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGL-VGAKALD 152 (373)
T ss_dssp CSSCS------SCCCEEE-TTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEEEEEESCGGGTS-HHHHHSC
T ss_pred cCCCC------CcCcEEE-CCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEeccccCc-hhhhhhC
Confidence 99863 4556786 999999999 7999999999999999999875 68999999999999985 6999885
Q ss_pred ccccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccC-CCCCC-CHHHHHHHHHHHHHhchhhhHHHH
Q 013216 178 DSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGA-KLYDN-SAMENLFKSIESVRRFRASQFDLV 255 (447)
Q Consensus 178 ~~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~-~p~~g-nai~~~~~~i~~l~~~~~~~~~~~ 255 (447)
.+. + ..+++++++.+. + ...+.++.+|..+++|+++|+++|++ .|+.| ||+..+++++..|+...
T Consensus 153 ~~~-~-~~~~~~~~~~~~--~--~g~i~~~~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~~~~------- 219 (373)
T 3gb0_A 153 RER-I-TAKYGYALDSDG--K--VGEIVVAAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLGR------- 219 (373)
T ss_dssp GGG-C-CCSEEEEEEECS--C--TTEEEEEECEEEEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSCCEE-------
T ss_pred HHh-c-CCCEEEEEcCCC--C--CCeEEEcCCCcEEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhccccc-------
Confidence 432 3 357888887532 1 24688899999999999999999999 79999 99999999998876421
Q ss_pred HhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc--CCCCceEeeccccc
Q 013216 256 KAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQ 333 (447)
Q Consensus 256 ~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~ 333 (447)
....++++++.+++|. +.|+||++|++.+|+|+.+.++.+++.++|+++++. ...+.+++ ++.
T Consensus 220 ------~~~~~~~~vg~i~gG~------~~Nvip~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~---i~~ 284 (373)
T 3gb0_A 220 ------IDSETTANIGRFEGGT------QTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHAD---VEV 284 (373)
T ss_dssp ------EETTEEEEEEEEEECS------CTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEE---EEE
T ss_pred ------CCCccccceeEEecCc------ccccccceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCeEE---EEE
Confidence 1123588999999886 999999999999999999999999999999888763 23455665 432
Q ss_pred cccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCcccc
Q 013216 334 RASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLN 413 (447)
Q Consensus 334 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~ 413 (447)
...+|++ ..++++++++.+.+++++++... .+..+.|++|+++|.+.|+|++.|||+.. ..|++||+++
T Consensus 285 ------~~~~~~~-~~~~~~~l~~~~~~~~~~~g~~~-~~~~~~g~~D~~~~~~~gip~~~~g~~~~---~~H~~~E~i~ 353 (373)
T 3gb0_A 285 ------NVMYPGF-KFADGDHVVEVAKRAAEKIGRTP-SLHQSGGGSDANVIAGHGIPTVNLAVGYE---EIHTTNEKIP 353 (373)
T ss_dssp ------EEEECCE-ECCTTCHHHHHHHHHHHHTTCCC-EEEECSSCCHHHHHHHTTCCEEEEECCCB---STTSTTCEEE
T ss_pred ------ecccCCc-ccCCCCHHHHHHHHHHHHhCCCc-eEecccCcchHHHHHhCCCCEEEecCCCC---cCcCCceEEE
Confidence 2333443 34568999999999999976544 55566789999999999999999999864 5999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013216 414 QAEYLKGIDIYESIIKAY 431 (447)
Q Consensus 414 ~~~l~~~~~~~~~~l~~l 431 (447)
++++.+++++|+.++..+
T Consensus 354 ~~~l~~~~~~~~~~l~~l 371 (373)
T 3gb0_A 354 VEELAKTAELVVAIIEEV 371 (373)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999999887
No 11
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.3e-51 Score=408.84 Aligned_cols=362 Identities=16% Similarity=0.197 Sum_probs=297.9
Q ss_pred CCCCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEee----cCCCCeEEEEecCC--CCCCCeEEE
Q 013216 22 SPAKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEF----AKNKPLILLKWPGS--NPQLPSILL 95 (447)
Q Consensus 22 ~~~~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~----~~~~~nl~~~~~g~--~~~~~~ill 95 (447)
+.+.+.+++++++++|++|||+| ++|.++++||.++|+++|++++.... ..+.+||++.++|+ +++.|+|+|
T Consensus 18 ~~~~~~~~~~~~l~~L~~ips~s--~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~~i~l 95 (396)
T 3rza_A 18 QGMINEQRLLNTFLELVQIDSET--GNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYL 95 (396)
T ss_dssp -CCSCHHHHHHHHHHHHTSCCBT--TCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CCCEEE
T ss_pred EEeecHHHHHHHHHHHeecCCCC--cCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCCeEEE
Confidence 56778999999999999999985 78899999999999999998875431 12467999999875 234689999
Q ss_pred eeccccCCCCCCCCCcCCCceeeCCC-CcEEecCc----ccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcc
Q 013216 96 NSHTDVVPSEPSKWSHHPFGAHLDSQ-GNIFARGS----QDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGH 170 (447)
Q Consensus 96 ~~H~Dtvp~~~~~W~~~Pf~~~~~~~-g~l~GrG~----~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~ 170 (447)
+||||+||+++ +|.+..+ + |++||||+ +|||++++++|.|++.|.+.+. ++++|.|+|+++||.|+
T Consensus 96 ~aH~D~vp~g~------~~~p~~~-~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~- 166 (396)
T 3rza_A 96 TSHMDTVVPAI------NVKPIVK-DDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEESGL- 166 (396)
T ss_dssp EEECCBCSSCS------SCCCEEC-TTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-CCCCEEEEEESCGGGTS-
T ss_pred EEECCccCCCC------CcceEEe-cCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEccccccc-
Confidence 99999999873 3444665 6 99999999 7999999999999999998875 67999999999999985
Q ss_pred cCHHHHHccccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchh
Q 013216 171 DGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRA 249 (447)
Q Consensus 171 ~G~~~~~~~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~ 249 (447)
.|++.+..++ ++ .+++++++.+. + ...+.++.+|..+++|+++|+++|+|.|+.| ||+..+++++..|+....
T Consensus 167 ~Ga~~~~~~~-~~-~~~~~~~~~~~--~--~g~i~~~~~g~~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~ 240 (396)
T 3rza_A 167 IGAKELNSEL-LD-ADFGYAIDASA--D--VGTTVVGAPTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLGQV 240 (396)
T ss_dssp HHHHHCCGGG-CC-CSEEEEEEESS--C--TTCEEEEECEEEEEEEEEECBCCBTTSGGGSBCHHHHHHHHHHHSCCEEE
T ss_pred HhHhhhchhh-cc-cceEEEEecCC--C--cceEEEcCCceEEEEEEEEeEecCCCCccccccHHHHHHHHHHhcccCCC
Confidence 6999886543 32 47888887532 2 2468889999999999999999999999999 999999999998865211
Q ss_pred hhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc--CCCCceEe
Q 013216 250 SQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFE 327 (447)
Q Consensus 250 ~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~ 327 (447)
...++++++.+++|. +.|+||++|++.+|+|+.+.++.+.+.++|+++++. ..++.+++
T Consensus 241 -------------~~~~~~~vg~i~gG~------~~NvIP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~a~~~g~~~~ 301 (396)
T 3rza_A 241 -------------DEITTANIGKFHGGS------ATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAE 301 (396)
T ss_dssp -------------ETTEEEEEEEEEECS------CTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred -------------CCCceeeeeEEecCC------CCcccCceEEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHhcCCEEE
Confidence 123688999999886 999999999999999999999999999999888763 23555665
Q ss_pred eccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCC
Q 013216 328 LGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHD 407 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~ 407 (447)
++. ...+|++ .+++++++++.+.+++++++... .+..+.|++|+++|...|+|++.|||+.. ..|+
T Consensus 302 ---i~~------~~~~p~~-~~~~d~~l~~~~~~~~~~~g~~~-~~~~~~g~tD~~~~~~~giP~~~~g~g~~---~~H~ 367 (396)
T 3rza_A 302 ---VTV------EQSYPGF-KINDNEAVVKIAQESARNLGLSA-NTIISGGGSDGSIINTFGIPSVILGVGYE---KIHT 367 (396)
T ss_dssp ---EEE------EEEECCE-ECCTTSHHHHHHHHHHHHTTCCC-CEEECSSCCHHHHHGGGTCCEEEEECCCB---STTS
T ss_pred ---EEE------EeccCCc-ccCCCcHHHHHHHHHHHHcCCCc-eecccceeccHHHHhhCCCcEEEECCCCC---CCCC
Confidence 442 2334443 34668999999999999986544 55667799999999999999999999864 5999
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 408 HNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 408 ~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
+||+++++++.+++++|+.++..+++
T Consensus 368 ~~E~v~~~~l~~~~~~~~~~~~~l~~ 393 (396)
T 3rza_A 368 TNERMPIKSLNLLASQVLEIIKIVAR 393 (396)
T ss_dssp TTCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceeEHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999865
No 12
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=5.8e-51 Score=417.98 Aligned_cols=392 Identities=16% Similarity=0.243 Sum_probs=303.2
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCC----ChhHHHHHHHHHHHHCCCceEEEeec-----CCC-----CeEEEEecCCCC
Q 013216 23 PAKSDDSIIERFRAYLQIDTSQPNP----DYTNASKFILAQAEALSLESQTLEFA-----KNK-----PLILLKWPGSNP 88 (447)
Q Consensus 23 ~~~~~~~~~~~l~~l~~ips~s~~~----~e~~~~~~i~~~l~~~G~~~~~~~~~-----~~~-----~nl~~~~~g~~~ 88 (447)
.+.+.+++++++++|++|||+|+.. ++.++++||.++|+++|++++..+.. .++ +||++.+++. +
T Consensus 15 ~~~~~~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~-~ 93 (479)
T 2zog_A 15 IDENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSD-P 93 (479)
T ss_dssp HHHTHHHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEEEECCC-T
T ss_pred HHHhHHHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEEEecCC-C
Confidence 3456789999999999999997321 23789999999999999988765421 234 7999999654 3
Q ss_pred CCCeEEEeeccccCCCCC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCccc
Q 013216 89 QLPSILLNSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (447)
Q Consensus 89 ~~~~ill~~H~Dtvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (447)
.+|+|+|+|||||||.++ +.|+++||.+.++ ||++||||++|||++++++|.|++.|.+.+.+++++|+|+|+++||.
T Consensus 94 ~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~-~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~ 172 (479)
T 2zog_A 94 QKKTVCIYGHLDVQPAALEDGWDSEPFTLVER-EGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLEGMEES 172 (479)
T ss_dssp TSCEEEEEEECCBCCCCGGGTCSSCTTSCEEE-TTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGG
T ss_pred CCCeEEEEEecCCCCCCccccCcCCCCcceeE-CCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEEEeccccc
Confidence 458999999999999986 7899999999997 99999999999999999999999999999888889999999999999
Q ss_pred CcccCHHHHHccc---cccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecC--CccCCCCCCCHHHHHHHHHH
Q 013216 168 GGHDGAEKFADSH---VFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAP--GHGAKLYDNSAMENLFKSIE 242 (447)
Q Consensus 168 g~~~G~~~~~~~~---~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~--~Hs~~p~~gnai~~~~~~i~ 242 (447)
|+ .|++.++++. .+.++|++++++.+...++ ...++++.+|..+++|+++|++ +|||.+ ..||+..+++++.
T Consensus 173 g~-~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~-~~~i~~~~~G~~~~~i~v~G~~~~~Hs~~~-g~~ai~~~~~~i~ 249 (479)
T 2zog_A 173 GS-EGLDELIFAQKDKFFKDVDYVCISDNYWLGKN-KPCITYGLRGICYFFIEVECSDKDLHSGVY-GGSVHEAMTDLIS 249 (479)
T ss_dssp TC-TTHHHHHHHTTTTTTTTCCEEEECCCBCSSSS-SCEEEEEECEEEEEEEEEECCSSCEEHHHH-TTTSCCHHHHHHH
T ss_pred CC-ccHHHHHHhhhhhhcccCCEEEEeCCCcCCCC-CeEEEEecceEEEEEEEEEeCCCCCccCCC-CCCccCHHHHHHH
Confidence 86 6999999865 3345788888876543232 3578899999999999999998 999985 2389988899888
Q ss_pred HHHhchhhh-------------------HHH----------HHh--cccc---------C---CCcceeeeeeeecCCCC
Q 013216 243 SVRRFRASQ-------------------FDL----------VKA--GLKA---------E---GEVVSVNMAFLKAGTPS 279 (447)
Q Consensus 243 ~l~~~~~~~-------------------~~~----------~~~--~~~~---------~---~~~~t~~~~~i~~g~~~ 279 (447)
.|+.+.... .+. +.. +... . ...++++++.|++|.
T Consensus 250 ~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~i~gg~-- 327 (479)
T 2zog_A 250 LMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLSLHGIEGAF-- 327 (479)
T ss_dssp HHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHHTSCEEEEEEEESSC--
T ss_pred HHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhhcCCCeEEeeeecCC--
Confidence 887654320 000 000 0000 0 013688999999873
Q ss_pred CCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccC--C--CCceEeeccccccccccccCCCCcccccCCCChH
Q 013216 280 PNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--S--RNMTFELGQFKQRASLHDKFGRPILTATDSSNPW 355 (447)
Q Consensus 280 ~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 355 (447)
.|+.+.|+||++|++.+++|+.|.++.+.+.++|+++++.. . .+.+++ ++. ...+|++ .++.++++
T Consensus 328 ~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~---~~~------~~~~p~~-~~~~d~~~ 397 (479)
T 2zog_A 328 SGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFK---VYM------GHGGKPW-VSDFNHPH 397 (479)
T ss_dssp CSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCSEEE---EEE------EEEECCE-ECCTTSHH
T ss_pred cCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhccCCCceEE---EEe------cCCCCce-ecCCCCHH
Confidence 23348999999999999999999999999999998887631 1 133444 331 1233443 35668999
Q ss_pred HHHHHHHHHHhcCCCCCceecCCCcch-HHHHHc-CCCeEEE--ccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHH
Q 013216 356 WNLLEEAVRKANGKLGKPEIFPASTDA-RYFRER-GLPAIGF--SPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 431 (447)
Q Consensus 356 ~~~~~~a~~~~~~~~~~~~~~~g~~D~-~~~~~~-g~p~~~~--gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l 431 (447)
++.+.++++++.+..+......|++|+ ++|.+. ++|++.+ ||+.. ..|++||+++++++.+++++|+.++..+
T Consensus 398 ~~~~~~a~~~~~g~~~~~~~~~gs~d~~~~~~~~~~~p~~~~g~g~~~~---~~H~~~E~i~~~~l~~~~~~~~~~~~~~ 474 (479)
T 2zog_A 398 YQAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADD---GAHSQNEKLNRLNYIEGTKMLAAYLYEV 474 (479)
T ss_dssp HHHHHHHHHHHHSSCCEEEEESSCCTHHHHHHHHHCSEEEECCCBCTTC---CTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCceecCCCCccchHHHHHHHhCCCEEEecCCCCcc---CCCCCCCcEeHHHHHHHHHHHHHHHHHH
Confidence 999999999974433233345688997 577664 8998875 55432 6999999999999999999999999998
Q ss_pred Hhh
Q 013216 432 ASY 434 (447)
Q Consensus 432 ~~~ 434 (447)
++.
T Consensus 475 ~~~ 477 (479)
T 2zog_A 475 SQL 477 (479)
T ss_dssp HHC
T ss_pred Hhh
Confidence 764
No 13
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.8e-50 Score=400.79 Aligned_cols=352 Identities=18% Similarity=0.220 Sum_probs=283.8
Q ss_pred hhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCc-eEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCC
Q 013216 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLE-SQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (447)
Q Consensus 27 ~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~-~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~ 105 (447)
.+++++++++|++|||+| ++|.+++++|.++|+++|++ .+... ..+|+++.+++. ..|+|+|+|||||||++
T Consensus 12 ~~~~~~~~~~l~~~ps~s--~~e~~~~~~l~~~l~~~G~~~~~~~~---~~~~~~a~~~~~--~~~~v~l~~H~D~vp~~ 84 (369)
T 3tx8_A 12 LGDPIVLTQRLVDIPSPS--GQEKQIADEIEDALRNLNLPGVEVFR---FNNNVLARTNRG--LASRVMLAGHIDTVPIA 84 (369)
T ss_dssp CSCHHHHHHHHHSSCCBT--TCTHHHHHHHHHHHHTTTCTTCEEEE---ETTEEEEECCCC--CSCEEEEEEECCBSCCC
T ss_pred HHHHHHHHHHHhcCCCCC--ccHHHHHHHHHHHHHhcCCCCcEEec---cCCcEEEEecCC--CCCeEEEEcccCccCCC
Confidence 567899999999999985 78999999999999999984 44333 235899999765 35899999999999987
Q ss_pred CCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcc-cCHHHHHcccc-cc
Q 013216 106 PSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGH-DGAEKFADSHV-FN 183 (447)
Q Consensus 106 ~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~-~G~~~~~~~~~-~~ 183 (447)
+ ||.+..+ +|++||||++|||++++++|.|++.|++. ..++++|+|+|+++||+|+. .|++.+++++. ..
T Consensus 85 ~------~~~~~~~-~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE~g~~~~G~~~~~~~~~~~~ 156 (369)
T 3tx8_A 85 D------NLPSRVE-DGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWL 156 (369)
T ss_dssp S------CCSCEEC-SSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCSSCTTSCHHHHHHHHCGGGG
T ss_pred C------CCCCeEE-CCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEeccccCcccccHHHHHHhccccc
Confidence 4 6778887 99999999999999999999999999864 36789999999999999852 49999988651 22
Q ss_pred CCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccC
Q 013216 184 SLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAE 262 (447)
Q Consensus 184 ~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 262 (447)
+.+++++.+ |+. ..++.+.+|..+++|+++|+++|+|.|+.| ||+..+++++..|+.+.....+ ....
T Consensus 157 ~~~~~i~~e-----p~~-~~i~~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~~i~~l~~~~~~~~~-----~~~~ 225 (369)
T 3tx8_A 157 AADLALLGE-----PTG-GWIEAGCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVN-----IDGL 225 (369)
T ss_dssp CCSEEEECC-----CCT-TCEEESBCEEEEEEEEEECBCCBTTSGGGSBCTGGGGHHHHHHHHHCCCCEEE-----ETTE
T ss_pred CCCEEEEeC-----CCC-CceeeecceEEEEEEEEeeeccccCCCCcCcCHHHHHHHHHHHHHhhcccccc-----cCCc
Confidence 457777664 443 578889999999999999999999999988 9999999999999876432100 0000
Q ss_pred CCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccC-CCCceEeeccccccccccccC
Q 013216 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA-SRNMTFELGQFKQRASLHDKF 341 (447)
Q Consensus 263 ~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 341 (447)
...++++++.+++|. +.|+||++|++.+|+|+++.++.+++.++|+++++.. .++++++ +. .
T Consensus 226 ~~~~~~~vg~i~gG~------~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~g~~~~---~~--------~ 288 (369)
T 3tx8_A 226 TYREGLNIVFCESGV------ANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETLELDGQDGIEWA---VE--------D 288 (369)
T ss_dssp EEECEEEEEEEEECS------BTTBCCSEEEEEEEEEECTTSCHHHHHHHHHHHTTTTTSTTEEEE---EE--------E
T ss_pred ccCceEEEEEEECCC------CCccccCcEEEEEEEecCCCCCHHHHHHHHHHHHHhcccCCeEEE---EE--------e
Confidence 013589999999887 9999999999999999999999999999999888742 2455555 42 1
Q ss_pred CCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHH
Q 013216 342 GRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGI 421 (447)
Q Consensus 342 ~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~ 421 (447)
..+.+ +...++|+++.+.+++ +.. .+....|++|+++|.+.|+|++.|||+... ..|++||+++++++.+++
T Consensus 289 ~~~~~-~~~~~~~~~~~~~~~~---g~~--~~~~~~ggtD~~~~~~~giP~~~~Gpg~~~--~~H~~~E~v~~~~l~~~~ 360 (369)
T 3tx8_A 289 GAGGA-LPGLGQQVTSGLIDAV---GRE--KIRAKFGWTDVSRFSAMGIPALNFGAGDPS--FAHKRDEQCPVEQITDVA 360 (369)
T ss_dssp EECCB-CCCTTSHHHHHHHHHH---CGG--GEEECCSCCTHHHHHTTTCCEEEECSSCSS--SSSCTTCEEEHHHHHHHH
T ss_pred cCCCC-CCCCCCHHHHHHHHHc---CCC--CCcccccccchHHHhhCCCCEEEECCCChh--hCCCCCcEEEHHHHHHHH
Confidence 12222 2455788888877663 321 234556889999999999999999998653 699999999999999999
Q ss_pred HHHHHHHH
Q 013216 422 DIYESIIK 429 (447)
Q Consensus 422 ~~~~~~l~ 429 (447)
++|+.++.
T Consensus 361 ~~l~~~l~ 368 (369)
T 3tx8_A 361 AILKQYLS 368 (369)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99999875
No 14
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=1.2e-51 Score=408.12 Aligned_cols=348 Identities=20% Similarity=0.248 Sum_probs=286.6
Q ss_pred hhHHHHHHHhhhcccCCCCC-CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCC-CCCCCeEEEeeccccCCC
Q 013216 27 DDSIIERFRAYLQIDTSQPN-PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGS-NPQLPSILLNSHTDVVPS 104 (447)
Q Consensus 27 ~~~~~~~l~~l~~ips~s~~-~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~-~~~~~~ill~~H~Dtvp~ 104 (447)
.+++++++++|++|||+|+. ++|.+++++|.++|+++|++++... .|+++.++|. +++.|+|+|++||||||.
T Consensus 5 ~~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~~-----~~~~~~~~~~~~~~~~~i~l~aH~D~vp~ 79 (364)
T 2rb7_A 5 MQHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERMD-----HDGIPSVMVLPEKGRAGLLLMAHIDVVDA 79 (364)
T ss_dssp HHHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEEE-----ETTEEEEEECSBTTEEEEEEEEECCCCCC
T ss_pred HHHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEec-----CCCceEEEEEcCCCCCeEEEECccCcCCC
Confidence 57899999999999999743 4688999999999999999987542 3688888642 224589999999999985
Q ss_pred CCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCC---cee--EEEEeecCcccCcccCHHHHHcc
Q 013216 105 EPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQP---VRS--VYLSFVPDEEIGGHDGAEKFADS 179 (447)
Q Consensus 105 ~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~---~~~--i~~~~~~~EE~g~~~G~~~~~~~ 179 (447)
+.+||.+.++ +|++||||++|||++++++|.|++.|.+.+.++ +++ |.|+|+++||.++..|++.++++
T Consensus 80 -----~~~p~~~~~~-~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~ 153 (364)
T 2rb7_A 80 -----EDDLFVPRVE-NDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALPL 153 (364)
T ss_dssp -----CGGGGSCEEE-TTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGGGTSTTTHHHHGGG
T ss_pred -----CCCCCccEEE-CCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccccCchhhHHHHHhc
Confidence 5789999997 999999999999999999999999999876555 568 99999999998555799999887
Q ss_pred ccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhc
Q 013216 180 HVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAG 258 (447)
Q Consensus 180 ~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~ 258 (447)
+ +.|+++++|.+ +|++ ++.+.+|..+++|+++|+++|++.|+.| ||+..+++++..|+.+.+ ..
T Consensus 154 ~---~~d~~i~~d~~--~p~~---i~~~~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~-------~~ 218 (364)
T 2rb7_A 154 I---RADYVVALDGG--NPQQ---VITKEKGIIDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA-------EE 218 (364)
T ss_dssp C---EEEEEEECSSS--BTTE---EEEEECEEEEEEEEEECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC-------CC
T ss_pred C---CCCEEEEccCC--cccc---eEEEeeeEEEEEEEEEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc-------ch
Confidence 5 45788887754 4543 8889999999999999999999999988 999999999999987521 00
Q ss_pred cccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeecccccccccc
Q 013216 259 LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLH 338 (447)
Q Consensus 259 ~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (447)
.. ....++++++.+++|. +.|+||++|++.+|+|+.+.++.+++.++|+++++. +++ ..
T Consensus 219 ~~-~~~~~~~~vg~i~gG~------~~NviP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-----~v~---~~------ 277 (364)
T 2rb7_A 219 NE-DHWHRTVNLGRIRAGE------STNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTVSG-----TVS---IV------ 277 (364)
T ss_dssp CT-TCCSCEEEEEEEEECS------CTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHCSS-----EEE---EE------
T ss_pred hh-cCCCceEEEEEEecCC------cCcccCcceEEEEEEeeCCCCCHHHHHHHHHHHhhh-----hEE---ec------
Confidence 00 0024689999999987 899999999999999999999999999999988863 333 11
Q ss_pred ccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHH
Q 013216 339 DKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYL 418 (447)
Q Consensus 339 ~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~ 418 (447)
...|. ..+.++++++.+.++++..+ . ...|++|+++|...++|++.|||+... ..|++||+++++++.
T Consensus 278 --~~~~~--~~~~~~~l~~~~~~~~~~~g----~--~~~g~~D~~~~~~~~~p~v~~Gp~~~~--~~H~~~E~i~~~~l~ 345 (364)
T 2rb7_A 278 --RTVPV--FLAADSPYTERLLALSGATA----G--KAHGASDARYLGENGLTGVVWGAEGFN--TLHSRDECLHIPSLQ 345 (364)
T ss_dssp --EEECC--EECCCCHHHHHHHHHHCCEE----E--EESSCCGGGGTGGGTCCEEECCCCCTT--CTTSTTCEEETTHHH
T ss_pred --cCCcc--ccCCCCHHHHHHHHHHHhcC----C--CCCCCchHHHHHhcCCCEEEECCCCcc--ccCCCCccccHHHHH
Confidence 22333 34557799999999887332 1 257889999999888999999998651 249999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 013216 419 KGIDIYESIIKAYAS 433 (447)
Q Consensus 419 ~~~~~~~~~l~~l~~ 433 (447)
+++++|+.++..++.
T Consensus 346 ~~~~~~~~~~~~~~~ 360 (364)
T 2rb7_A 346 SIYDPLMQLAREMEE 360 (364)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998864
No 15
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=7.6e-51 Score=409.68 Aligned_cols=370 Identities=17% Similarity=0.149 Sum_probs=281.0
Q ss_pred CCCh--hHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeecccc
Q 013216 24 AKSD--DSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDV 101 (447)
Q Consensus 24 ~~~~--~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dt 101 (447)
+.+. +++++++++|++|||+| ++|.+++++|.++|+++|++++..+ +.+|++++++|.++ |+|+|+|||||
T Consensus 22 ~~~~~~~~~i~~~~~l~~ips~s--~~e~~~~~~l~~~l~~~G~~v~~~~---~~~~l~a~~~~~~~--~~i~l~aH~D~ 94 (418)
T 1xmb_A 22 KSPEVFDWMVKIRRKIHENPELG--YEELETSKLIRSELELIGIKYRYPV---AITGVIGYIGTGEP--PFVALRADMDA 94 (418)
T ss_dssp HSHHHHHHHHHHHHHHHHSCCCT--TCCHHHHHHHHHHHHHHTCCEEEEE---TTTEEEEEEESSSS--CEEEEEEECCC
T ss_pred HhhhcHHHHHHHHHHHHhCCCCC--CChHHHHHHHHHHHHHcCCeeEecc---CCcEEEEEEcCCCC--CEEEEEecccc
Confidence 3456 88999999999999986 7899999999999999999987543 45699999986543 89999999999
Q ss_pred CCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHcccc
Q 013216 102 VPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHV 181 (447)
Q Consensus 102 vp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~ 181 (447)
||.++ |+.+||.+. + +|++||||+ |++++++|.|++.|.+.+.+++++|+|+|+++|| |+ .|++.+++++.
T Consensus 95 vp~~~--~~~~pf~~~-~-~g~~~g~G~---d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE-g~-~G~~~~~~~g~ 165 (418)
T 1xmb_A 95 LPIQE--GVEWEHKSK-I-AGKMHACGH---DGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEE-GL-SGAKKMREEGA 165 (418)
T ss_dssp BSCCC--CCCSTTCCS-S-TTCBCCSSH---HHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTT-TT-CHHHHHHHTTT
T ss_pred cCCCC--CCCCCcccC-C-CCceEeCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecccc-cc-ccHHHHHHcCC
Confidence 99874 999999974 4 899999995 6999999999999999887789999999999999 75 79999998876
Q ss_pred ccCCceEEEEecCCcCcCCcc--eeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhc
Q 013216 182 FNSLNVGIVLDEGLASTTEDY--RAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAG 258 (447)
Q Consensus 182 ~~~~~~~~~~d~g~~~p~~~~--~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~ 258 (447)
++++|..++++.....|++.. .+..+.+|..+++|+++|+++|+|.|+.| ||+..+++++..|+.+.....+
T Consensus 166 ~~~~d~~i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~----- 240 (418)
T 1xmb_A 166 LKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETD----- 240 (418)
T ss_dssp TTTEEEEEEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSS-----
T ss_pred cCCCCEEEEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccC-----
Confidence 655677777654322454432 44567899999999999999999999998 9999999999999876422110
Q ss_pred cccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc--CCCCceEeecccccccc
Q 013216 259 LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQRAS 336 (447)
Q Consensus 259 ~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~ 336 (447)
....++++++.+++|. +.|+||++|++.+|+|+.+ +.+++.++|+++++. ...+++++ ++.
T Consensus 241 ---~~~~~t~~vg~i~gG~------~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a~~~g~~~~---~~~--- 303 (418)
T 1xmb_A 241 ---PLDSKVVTVSKVNGGN------AFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNAS---VNL--- 303 (418)
T ss_dssp ---GGGCEEEEEEEEC--------------CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHHHHTTEEEE---EES---
T ss_pred ---CCCCcEEEEEEEEecC------cCCcCCCeEEEEEEEccCc--HHHHHHHHHHHHHHHHHHHhCCeEE---EEE---
Confidence 1123588999999887 9999999999999999999 899999999988863 22456666 431
Q ss_pred ccccCC-CCcccccCCCChHHHHHHHHHHHhcCCCC--CceecCCCcchHHHHHcCCCeE--EEccCCCC--CCCCCCCC
Q 013216 337 LHDKFG-RPILTATDSSNPWWNLLEEAVRKANGKLG--KPEIFPASTDARYFRERGLPAI--GFSPMANT--PILLHDHN 409 (447)
Q Consensus 337 ~~~~~~-~p~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~g~~D~~~~~~~g~p~~--~~gp~~~~--~~~~H~~~ 409 (447)
... .|+++++..++++++.+.++++++.+..+ .+....|++|+++|... +|++ .|||+..+ ....|++|
T Consensus 304 ---~~~~~~p~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~P~~~~~~G~~~~~~~~~~~H~~~ 379 (418)
T 1xmb_A 304 ---TPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAET-IPGHFSLLGMQDETNGYASSHSPL 379 (418)
T ss_dssp ---SGGGCCCBCCEEECHHHHHHHHHHHHHHHCGGGEEECCCBCCCCTHHHHHTT-SCEEEEEEEEECTTCCSCCTTCTT
T ss_pred ---ccCCcccCCCccCCHHHHHHHHHHHHHhcCCcceeccCCCCCcchHHHHHHH-CCEEEEEEeCCCCCCCCCCCCCCC
Confidence 122 22233456689999999999999644321 23456799999999876 8974 57886421 13689999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHhhc
Q 013216 410 EFLNQAEYLKGIDIYESIIKAYASYV 435 (447)
Q Consensus 410 E~v~~~~l~~~~~~~~~~l~~l~~~~ 435 (447)
|+++++++.+++++|+.++..+++..
T Consensus 380 E~i~~~~l~~~~~~~~~~~~~l~~~~ 405 (418)
T 1xmb_A 380 YRINEDVLPYGAAIHASMAVQYLKEK 405 (418)
T ss_dssp CCCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999987644
No 16
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=2.2e-51 Score=415.64 Aligned_cols=360 Identities=17% Similarity=0.174 Sum_probs=290.8
Q ss_pred ChhHHHHHHHhhhcccCCCCCC--------ChhHHHHHHHHHHHHCCCc-eEEEeecCCCCeEEEEecCCCC-CCCeEEE
Q 013216 26 SDDSIIERFRAYLQIDTSQPNP--------DYTNASKFILAQAEALSLE-SQTLEFAKNKPLILLKWPGSNP-QLPSILL 95 (447)
Q Consensus 26 ~~~~~~~~l~~l~~ips~s~~~--------~e~~~~~~i~~~l~~~G~~-~~~~~~~~~~~nl~~~~~g~~~-~~~~ill 95 (447)
..++++++|++|++|||+|+.+ +|.++++||.++|+++|++ ++. + ..+||+++++|+++ +.|+|+|
T Consensus 25 ~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~-d---~~~nv~a~~~g~~~~~~~~v~l 100 (434)
T 3ife_A 25 MKEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTM-D---DNGYVMATLPANTDKDVPVIGF 100 (434)
T ss_dssp HHHHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEE-C---TTSCEEEEECCBSSSCCCCEEE
T ss_pred HHHHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEE-C---CCcEEEEEeCCCCCCCCCeEEE
Confidence 3578999999999999997532 5789999999999999997 653 3 45699999988753 4689999
Q ss_pred eeccccCCCCCCCCCcCCCceeeC---------------------------CCCcEEecCc----ccchhHHHHHHHHHH
Q 013216 96 NSHTDVVPSEPSKWSHHPFGAHLD---------------------------SQGNIFARGS----QDMKCVGMQYLEAIR 144 (447)
Q Consensus 96 ~~H~Dtvp~~~~~W~~~Pf~~~~~---------------------------~~g~l~GrG~----~D~k~~~a~~l~a~~ 144 (447)
+|||||||.. +.|..+||..... .+++|||||+ +|||++++++|.|++
T Consensus 101 ~~H~DtVp~~-~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~ 179 (434)
T 3ife_A 101 LAHLDTATDF-TGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMN 179 (434)
T ss_dssp EEECCBCTTS-CCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHH
T ss_pred EEEcccCCCC-CCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHH
Confidence 9999999975 4799999975421 0269999998 999999999999999
Q ss_pred HHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCc
Q 013216 145 RLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGH 224 (447)
Q Consensus 145 ~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~H 224 (447)
.|.+.+..++++|.|+|+++||+| .|++.+.. ..+ ++|+++++|.+ + ...++++.+|..+++|+++|+++|
T Consensus 180 ~L~~~~~~~~~~i~~if~~~EE~g--~Ga~~~~~-~~~-~~d~~~~~d~~---~--~g~i~~~~~G~~~~~i~v~G~~~H 250 (434)
T 3ife_A 180 YLIHNPQIKHGKIRVAFTPDEEIG--RGPAHFDV-EAF-GASFAYMMDGG---P--LGGLEYESFNAAGAKLTFNGTNTH 250 (434)
T ss_dssp HHHTCTTSCBCCEEEEEESCGGGT--CTGGGCCH-HHH-CCSEEEECCCC---S--TTEEECCBCEEEEEEEEEECBCCC
T ss_pred HHHhCCCCCCCCEEEEEECCcccC--hHHHHhhh-hhc-CCCEEEEecCC---C--CCceeecCCCeEEEEEEEEEEecC
Confidence 999988788999999999999987 48887743 234 46888888742 2 236888999999999999999999
Q ss_pred cC-CCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCC
Q 013216 225 GA-KLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPP 302 (447)
Q Consensus 225 s~-~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~ 302 (447)
+| .|+.+ ||+..+++++..|+.+... ..++.+++.+++| ..|+||++|++.+|+|+.+
T Consensus 251 ag~~P~~g~nAi~~aa~~i~~l~~~~~~-------------~~~~~~~g~i~~g-------~~n~iP~~a~~~~diR~~~ 310 (434)
T 3ife_A 251 PGTAKNKMRNATKLAMEFNGHLPVEEAP-------------EYTEGYEGFYHLL-------SLNGDVEQSKAYYIIRDFD 310 (434)
T ss_dssp GGGCTTTCBCHHHHHHHHHHTSCTTCSG-------------GGCCTTCCEEEEE-------EEEECSSEEEEEEEEEESS
T ss_pred CCCCcccchhHHHHHHHHHHhcccccCC-------------CcceeeeEEEEee-------eEeEecCeEEEEEEEecCC
Confidence 87 69988 9999999999988765211 0123445556655 6899999999999999999
Q ss_pred CCCHHHHHHHHHHHhccC--CCC---ceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecC
Q 013216 303 TTDAESLERRIVEEWAPA--SRN---MTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFP 377 (447)
Q Consensus 303 ~~~~~~i~~~i~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 377 (447)
.++.+++.++|+++++.. ..+ ++++ +. ..+.|.+..+.+++++++.+++++++++... .+..+.
T Consensus 311 ~~~~~~i~~~i~~~~~~~~~~~g~~~~~v~---~~-------~~~~~~~~~~~~d~~l~~~~~~a~~~~G~~~-~~~~~~ 379 (434)
T 3ife_A 311 RKNFEARKNTIENIVKQMQEKYGQDAVVLE---MN-------DQYYNMLEKIEPVREIVDIAYEAMKSLNIEP-NIHPIR 379 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCGGGEEEE---EE-------EEECCTHHHHGGGTHHHHHHHHHHHHTTCCC-EECCBS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceEEEE---Ee-------ecccchhccccCCHHHHHHHHHHHHHhCCCC-EEeecc
Confidence 999999999999888631 223 4444 32 1233332245678999999999999966543 445567
Q ss_pred CCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 378 ASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 378 g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
|++|+++|...|+|++.|||+.. ..|+|||+++++++.+++++|+.++..+++
T Consensus 380 ggtD~~~~~~~GiP~~~~g~g~~---~~H~~~E~i~~~~l~~~~~~~~~~l~~la~ 432 (434)
T 3ife_A 380 GGTDGSQLSYMGLPTPNIFTGGE---NYHGKFEYVSVDVMEKAVQVIIEIARRFEE 432 (434)
T ss_dssp SCCHHHHHHHTTCCCCEECCSEE---STTSTTCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHhhCCCcEEEeCCCCC---CCcCCceeecHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999865 599999999999999999999999999875
No 17
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=5.2e-51 Score=409.11 Aligned_cols=364 Identities=16% Similarity=0.156 Sum_probs=280.4
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCC
Q 013216 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (447)
Q Consensus 26 ~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~ 105 (447)
..+++++++++|++|||+| ++|.++++||.++|+++|++++..+. +++|+++.++|.++ .|+|+|+|||||||.+
T Consensus 30 ~~~~~i~~~~~l~~ips~s--~~e~~~~~~l~~~l~~~G~~v~~~~~--~~~nv~a~~~g~~~-~~~i~l~~H~D~vp~~ 104 (404)
T 1ysj_A 30 FHTRLINMRRDLHEHPELS--FQEVETTKKIRRWLEEEQIEILDVPQ--LKTGVIAEIKGRED-GPVIAIRADIDALPIQ 104 (404)
T ss_dssp HHHHHHHHHHHHHHSCCCT--TCCHHHHHHHHHHHHHTTCEECCCTT--CSSCEEEEEECSSC-CCEEEEEEECCCBSCC
T ss_pred HHHHHHHHHHHHHhcCCCC--CChHHHHHHHHHHHHHcCCceEEecc--CCceEEEEEeCCCC-CCEEEEEEecccccCC
Confidence 4578999999999999986 78899999999999999998764332 57799999987643 4899999999999987
Q ss_pred CCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCC
Q 013216 106 PSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSL 185 (447)
Q Consensus 106 ~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~ 185 (447)
+ |+.+||.+. . +|++||||+ |++++++|.|++.|.+.+..++++|+|+|+++||+ + .|++.+++++.++++
T Consensus 105 ~--~~~~Pf~~~-~-~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~-~-~G~~~~~~~g~~~~~ 175 (404)
T 1ysj_A 105 E--QTNLPFASK-V-DGTMHACGH---DFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEI-A-AGARKVLEAGVLNGV 175 (404)
T ss_dssp C--CCCCTTCCS-S-TTCBCTTSH---HHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTT-T-CHHHHHHHTTTTTTE
T ss_pred C--CCCCCcccC-C-CCceEcCcC---hHHHHHHHHHHHHHHhccccCCceEEEEEeccccc-c-hhHHHHHhcCCCcCC
Confidence 4 999999987 4 899999994 79999999999999988777899999999999998 4 699999988766656
Q ss_pred ceEEEEecCCcCcCCcceeEee--eeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccC
Q 013216 186 NVGIVLDEGLASTTEDYRAFYA--ERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAE 262 (447)
Q Consensus 186 ~~~~~~d~g~~~p~~~~~i~~~--~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 262 (447)
|..+.++.....+.+...+..+ .+|..+++|+++|+++|++.|+.| ||+..+++++..|+.+.....+ +
T Consensus 176 d~~i~~h~ep~~~~g~v~~~~g~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~--------~ 247 (404)
T 1ysj_A 176 SAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNIS--------S 247 (404)
T ss_dssp EEEEEEEEETTSCTTEEEECSEEEECCEEEEEEEEECC--------CCCCHHHHHHHHHHHHC-----------------
T ss_pred CEEEEEecCCCCCCceEEeccChhhcccceEEEEEEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcC--------C
Confidence 7666664211112121222334 678999999999999999999988 9999999999999765322111 0
Q ss_pred CCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc--CCCCceEeecccccccccccc
Q 013216 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQRASLHDK 340 (447)
Q Consensus 263 ~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 340 (447)
...++++++.+++|. +.|+||++|++.+|+|+.+.++.+++.++|+++++. ..++++++ ++. .
T Consensus 248 ~~~~~~~vg~i~gG~------~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~---~~~------~ 312 (404)
T 1ysj_A 248 LQNAVVSITRVQAGT------SWNVIPDQAEMEGTVRTFQKEARQAVPEHMRRVAEGIAAGYGAQAE---FKW------F 312 (404)
T ss_dssp --CCEEEEEEEEECS------CSSSCCSEEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEE---EEE------E
T ss_pred CCCcEEEEEEEEcCC------CCceecCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCEEE---EEE------e
Confidence 123589999999987 999999999999999999999999999999988863 23456555 431 1
Q ss_pred CCCCcccccCCCChHHHHHHHHHHHh-cCCCCCceecCCCcchHHHHHcCCCeE--EEccCCCCCCCCCCCCccccHHHH
Q 013216 341 FGRPILTATDSSNPWWNLLEEAVRKA-NGKLGKPEIFPASTDARYFRERGLPAI--GFSPMANTPILLHDHNEFLNQAEY 417 (447)
Q Consensus 341 ~~~p~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~~~~~g~~D~~~~~~~g~p~~--~~gp~~~~~~~~H~~~E~v~~~~l 417 (447)
..+|++ ..+.++++.+.++++++ .+..+.. ...|++|+++|.+. +|++ .|||+... ..|++||+++++++
T Consensus 313 ~~~~~~---~~~~~l~~~~~~~~~~~g~g~~~~~-~~~g~tD~~~~~~~-~p~~~~~~G~~~~~--~~H~~~E~v~~~~l 385 (404)
T 1ysj_A 313 PYLPSV---QNDGTFLNAASEAAARLGYQTVHAE-QSPGGEDFALYQEK-IPGFFVWMGTNGTE--EWHHPAFTLDEEAL 385 (404)
T ss_dssp EEECCE---EECGGGHHHHHHHHHHTTCEEEECC-CBSSCCTHHHHHTT-SCEEEEEEECCCSS--CTTCTTCCCCTTHH
T ss_pred cCCCCc---cCCHHHHHHHHHHHHHhcCCccccc-cCCccchHHHHHHH-CCeEEEEEcCCCCC--CCCCCCCcCCHHHH
Confidence 233333 34578999999999998 3332123 56789999999876 8864 78887532 69999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 013216 418 LKGIDIYESIIKAYAS 433 (447)
Q Consensus 418 ~~~~~~~~~~l~~l~~ 433 (447)
.+++++|+.++.++++
T Consensus 386 ~~~~~~~~~~~~~~~~ 401 (404)
T 1ysj_A 386 TVASQYFAELAVIVLE 401 (404)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999875
No 18
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=1.8e-50 Score=409.72 Aligned_cols=369 Identities=15% Similarity=0.122 Sum_probs=272.4
Q ss_pred CCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEee-------------------------------
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEF------------------------------- 72 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~------------------------------- 72 (447)
+...+++++++++|+++|+++ ++|.+++++|.++|+++|++++....
T Consensus 10 ~~~~~~~~~~~~~lh~~Pe~~--~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 87 (445)
T 3io1_A 10 RQLAPSMTQWRRDFHLHAESG--WLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAREQGAPER 87 (445)
T ss_dssp HTTHHHHHHHHHHHHHTCCCT--TCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTTCCTT
T ss_pred HHHHHHHHHHHHHHHhCCCCC--CcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhcccccccc
Confidence 567889999999999999985 89999999999999999998775210
Q ss_pred ----c-CCCCeEEEEecCCCCCCCeEEEeeccccCCCCC-CCCCcCCCce---eeCCCCcEEecCcccchhHHHHHHHHH
Q 013216 73 ----A-KNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP-SKWSHHPFGA---HLDSQGNIFARGSQDMKCVGMQYLEAI 143 (447)
Q Consensus 73 ----~-~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~-~~W~~~Pf~~---~~~~~g~l~GrG~~D~k~~~a~~l~a~ 143 (447)
. .+++||+++++|..+ +|+|+|+||||+||+++ .+|+++||.. ... +|++||||+ +++++++|.|+
T Consensus 88 ~~~~~~~~~~~vva~~~~~~~-g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~-~G~~h~cGh---d~~~a~~l~aa 162 (445)
T 3io1_A 88 WLPAFEGGFAGVVATLDTGRP-GPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCN-AGMMHACGH---DGHTAIGLGLA 162 (445)
T ss_dssp TGGGGTTTCCCEEEEEECSSC-CCEEEEEEECCCCCC--------------------------CTT---CTHHHHHHHHH
T ss_pred ccccccCCCCEEEEEEeCCCC-CCEEEEEEecCCcCCCCCCCCCcCccccccccCC-CCceEecCc---hHHHHHHHHHH
Confidence 0 156899999987654 48999999999999986 7899999987 454 899999997 48999999999
Q ss_pred HHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCceEEEEecCCcCcCCcceeEeeeee---eEEEEEEEee
Q 013216 144 RRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERC---PWWLVIKARG 220 (447)
Q Consensus 144 ~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G---~~~~~i~v~G 220 (447)
+.|.+.+.+++++|+|+|+++||++ .|++.|++++.++++|++++++.+...|.+ .+.++.+| ..+++|+++|
T Consensus 163 ~~L~~~~~~~~g~v~l~f~p~EE~~--~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g--~i~~~~~g~~a~~~~~i~v~G 238 (445)
T 3io1_A 163 HVLKQYAAQLNGVIKLIFQPAEEGT--RGARAMVAAGVVDDVDYFTAIHIGTGVPAG--TVVCGGDNFMATTKFDVQFSG 238 (445)
T ss_dssp HHHHHTGGGCCSEEEEEEESCTTTT--CHHHHHHHTTTTTTCSEEEEEEEEEEEETT--BEESCCCCBCEEEEEEEEEEC
T ss_pred HHHHhCcCcCCceEEEEEecccccc--chHHHHHHcCCccccceeEEEeccCCCCCC--eEEEecCCeeEEEEEEEEEEe
Confidence 9999987788999999999999954 599999998888888999988754323433 45555554 5799999999
Q ss_pred cCCcc-CCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEee
Q 013216 221 APGHG-AKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDI 298 (447)
Q Consensus 221 ~~~Hs-~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~ 298 (447)
+++|+ +.|+.| ||+..+++++..|+.+... ..+.++++++.+++|. +.|+||++|++.+++
T Consensus 239 k~~HaGs~P~~g~nAi~~aa~~i~~l~~l~~~-----------~~~~~~~~vg~i~gG~------~~NvIP~~a~~~~~i 301 (445)
T 3io1_A 239 VAAHAGGKPEDGRNALLAAAQAALGLHAIPPH-----------SAGASRVNVGVMQAGT------GRNVVPSSALLKVET 301 (445)
T ss_dssp CCSSTTCCGGGCCCHHHHHHHHHHHHHTCCCB-----------TTBCEEEEEEEEEECS------CTTSCCCEEEEEEEE
T ss_pred ecCCCCCCCcCCcCHHHHHHHHHHHHHHHHhh-----------cCCCeEEEEEEEecCC------CCceeCCeEEEEEEE
Confidence 99998 689998 9999999999999887421 1123689999999987 999999999999999
Q ss_pred ecCCCCCHHHHHHHHHHHhcc--CCCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCC---Cc
Q 013216 299 RVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLG---KP 373 (447)
Q Consensus 299 R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~---~~ 373 (447)
|+.+.++.+.+.++|+++++. ..++++++ ++. ...+| ++.+|.++++.+.++++++++... ..
T Consensus 302 R~~~~~~~~~i~~~i~~~~~~~a~~~g~~~~---i~~------~~~~~---~~~~d~~l~~~~~~a~~~~~g~~~v~~~~ 369 (445)
T 3io1_A 302 RGESEAINQYVFERAQHVVAGAAAMYEARYE---LRM------MGAAT---ASAPSPAWVDYLREQAARVPGVQQAVDRI 369 (445)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHHHHTTCEEE---EEE------EEEEC---CCCCCHHHHHHHHHHHHHSTTCCBCBSSC
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHhCCeEE---EEE------ecCCC---CcCCCHHHHHHHHHHHHHhcCCccceecC
Confidence 999999999999999988863 23566666 442 12223 346688999999999999864321 11
Q ss_pred eecCCCcchHHHHHcCCC------e-EEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhhc
Q 013216 374 EIFPASTDARYFRERGLP------A-IGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASYV 435 (447)
Q Consensus 374 ~~~~g~~D~~~~~~~g~p------~-~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~~~ 435 (447)
..+.|++|+++|.+. +| + +.|||+... ..|+|||+++++++..++++|+.++..++..+
T Consensus 370 ~~~~g~~D~~~~~~~-~P~~gg~~~~~~~G~~~~~--~~H~~~E~i~~~~l~~g~~~~~~~~~~~~~~~ 435 (445)
T 3io1_A 370 AAPAGSEDATLMMAR-VQARGGLASYMIFGTELSA--GHHNEKFDFDESVMAVAVETLARVALNFPWQR 435 (445)
T ss_dssp CCCCBCCTHHHHHHH-HHHTTCEEEEEEEEEEC-------------CCCHHHHHHHHHHHHHHTCCSCC
T ss_pred CCCccHHHHHHHHHH-hcccCCceEEEEEeCCCCC--CCCCCCCcCCHHHHHHHHHHHHHHHHHHhhcc
Confidence 224689999999876 33 3 578886432 68999999999999999999999998886544
No 19
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=100.00 E-value=1.1e-48 Score=401.13 Aligned_cols=371 Identities=19% Similarity=0.251 Sum_probs=250.3
Q ss_pred CCCCChhHHHHHHHhhhcccCCCCCC----------ChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEec-CCCCCC
Q 013216 22 SPAKSDDSIIERFRAYLQIDTSQPNP----------DYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWP-GSNPQL 90 (447)
Q Consensus 22 ~~~~~~~~~~~~l~~l~~ips~s~~~----------~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~-g~~~~~ 90 (447)
..+.+.+++++++++|++|||+|+.. ++.++++++.++|+++|++++.++ |+++..+ |. +.
T Consensus 28 ~i~~~~~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~~------~~~~~~~~g~--~~ 99 (492)
T 3khx_A 28 KVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD------HIAGRIEAGK--GN 99 (492)
T ss_dssp HHHTTHHHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEET------TTEEEEEEEC--SS
T ss_pred HHHHhHHHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEeC------CEEEEEEeCC--CC
Confidence 34567899999999999999997422 135899999999999999987542 3454443 43 35
Q ss_pred CeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcc
Q 013216 91 PSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGH 170 (447)
Q Consensus 91 ~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~ 170 (447)
|+|+|+|||||||+++ .|+++||.+.++ ||++||||++|||++++++|.|++.|++.+.+++++|.|+|+++||+|+
T Consensus 100 ~~i~l~~H~D~vp~~~-~w~~~Pf~~~~~-~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~- 176 (492)
T 3khx_A 100 DVLGILCHVDVVPAGD-GWDSNPFEPVVT-EDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDW- 176 (492)
T ss_dssp CEEEEEEECCCCCCCS-CCSSCTTSCEEC-SSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEECCTTCCC-
T ss_pred CEEEEEEeccCCCCCC-CcccCCCceEEE-CCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCC-
Confidence 8999999999999964 899999999997 9999999999999999999999999999988889999999999999997
Q ss_pred cCHHHHHccccccCCceEEEEec-------------------------------------CCc---CcCCccee------
Q 013216 171 DGAEKFADSHVFNSLNVGIVLDE-------------------------------------GLA---STTEDYRA------ 204 (447)
Q Consensus 171 ~G~~~~~~~~~~~~~~~~~~~d~-------------------------------------g~~---~p~~~~~i------ 204 (447)
.|++.++++... ++++++.|. |.. .|..-..+
T Consensus 177 ~g~~~~~~~~~~--~~~~~~~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~aiv~ept~ 254 (492)
T 3khx_A 177 KCTDRYFKTEEM--PTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVKEN 254 (492)
T ss_dssp CTTSHHHHHSCC--CSEEECSSCSSCSCCCBCEEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEEEEECSC
T ss_pred cCHHHHHHhCcC--CCEEEecCCCccEEEecCcEEEEEEEEeccccccccccceeEEecccccCCcCCchHheEeecccc
Confidence 699999986421 333333321 100 01100001
Q ss_pred -------------EeeeeeeE-----EEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhch--hhhHHHHHh------
Q 013216 205 -------------FYAERCPW-----WLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFR--ASQFDLVKA------ 257 (447)
Q Consensus 205 -------------~~~~~G~~-----~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~--~~~~~~~~~------ 257 (447)
..+.+|.. +++|+++|+++|+|.|+.| |||..+++++..|..-. ...++.+..
T Consensus 255 ~~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~ 334 (492)
T 3khx_A 255 MTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSD 334 (492)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTTTCT
T ss_pred hHHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhCCCC
Confidence 13458888 9999999999999999999 99999999998875200 001111100
Q ss_pred -cc-------ccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeec
Q 013216 258 -GL-------KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELG 329 (447)
Q Consensus 258 -~~-------~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~ 329 (447)
+. ......++++++.+++| . |++|++.+|+|+.+..+.+++.++|+++++ ..+++++
T Consensus 335 ~~~~l~i~~~d~~~G~~t~n~g~i~~g-------~----P~~a~~~idiR~~~~~~~~~v~~~i~~~~~--~~g~~~~-- 399 (492)
T 3khx_A 335 FGEKMGMKFHTDVMGDVTTNIGVITYD-------N----ENAGLFGINLRYPEGFEFEKAMDRFANEIQ--QYGFEVK-- 399 (492)
T ss_dssp TSGGGTCC-------CCEEEEEEEEEE-------T----TTCCEEEEEEEECTTCCHHHHHHHHHHHHG--GGTEEEE--
T ss_pred CccccCCccccCCcCccEEeeeEEEEe-------c----CCEEEEEEEeeCCCCCCHHHHHHHHHHHHH--HcCCEEE--
Confidence 00 00112357777777755 1 999999999999999999999999998886 3456666
Q ss_pred cccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCC
Q 013216 330 QFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHN 409 (447)
Q Consensus 330 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~ 409 (447)
+. ....|.. .+.++++++.+.++++++.+..+.+..++|++|+++|.. ++|.-.++|+... ..|++|
T Consensus 400 -i~-------~~~~p~~--~~~d~~lv~~l~~a~~~~~G~~~~~~~~gggtDa~~~~~-~v~~G~~fPg~~~--~~H~~d 466 (492)
T 3khx_A 400 -LG-------KVQPPHY--VDKNDPFVQKLVTAYRNQTNDMTEPYTIGGGTYARNLDK-GVAFGAMFSDSED--LMHQKN 466 (492)
T ss_dssp -EE-------EEECCBC--CGGGCHHHHHHHHHHHTTCC--------------------------------------CCS
T ss_pred -Ee-------ccCCcee--cCCCcHHHHHHHHHHHHHhCCCCeEEeeehhHHHHHhhC-ceEECCcCCCCCC--CCCCCc
Confidence 43 2334433 456789999999999998544336667789999999976 3443211166443 699999
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHh
Q 013216 410 EFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 410 E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
|+++++++.+++++|+.++..+++
T Consensus 467 E~v~i~~l~~~~~i~~~~l~~l~~ 490 (492)
T 3khx_A 467 EYITKKQLFNATSIYLEAIYSLCV 490 (492)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHHHT
T ss_pred cCcCHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999865
No 20
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=100.00 E-value=5.8e-48 Score=388.78 Aligned_cols=360 Identities=20% Similarity=0.208 Sum_probs=286.3
Q ss_pred hHHHHHHHhhhcccCCCCCC--------ChhHHHHHHHHHHHHCCCc-eEEEeecCCCCeEEEEecCCCC-CCCeEEEee
Q 013216 28 DSIIERFRAYLQIDTSQPNP--------DYTNASKFILAQAEALSLE-SQTLEFAKNKPLILLKWPGSNP-QLPSILLNS 97 (447)
Q Consensus 28 ~~~~~~l~~l~~ips~s~~~--------~e~~~~~~i~~~l~~~G~~-~~~~~~~~~~~nl~~~~~g~~~-~~~~ill~~ 97 (447)
++++++|++|++|||+|+.+ +|.++++||.++|+++|++ ++. + ..+||++.++|+++ ..|+|+|+|
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~-~---~~~nvia~~~g~~~~~~~~i~l~a 77 (417)
T 1fno_A 2 DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITL-S---EKGTLMATLPANVEGDIPAIGFIS 77 (417)
T ss_dssp CSHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEE-C---TTCCEEEEECCSSCSCCCCEEEEE
T ss_pred hHHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEE-C---CCceEEEEECCCCCCCCCceEEEE
Confidence 46889999999999997533 6789999999999999998 543 2 45699999987642 358999999
Q ss_pred ccccCCCCCCCCCcCCC-----cee-e---------------------CCCCcEEecCc----ccchhHHHHHHHHHHHH
Q 013216 98 HTDVVPSEPSKWSHHPF-----GAH-L---------------------DSQGNIFARGS----QDMKCVGMQYLEAIRRL 146 (447)
Q Consensus 98 H~Dtvp~~~~~W~~~Pf-----~~~-~---------------------~~~g~l~GrG~----~D~k~~~a~~l~a~~~l 146 (447)
||||||..+ .|..+|| .+. + . |+++||||+ +|||++++++|.|++.|
T Consensus 78 H~D~Vp~~~-~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~g-d~~l~grGat~l~~D~K~g~a~~l~a~~~l 155 (417)
T 1fno_A 78 HVDTSPDFS-GKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLG-QTLITTDGKTLLGADDKAGVAEIMTALAVL 155 (417)
T ss_dssp ECCBCTTSC-CSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTT-SCEEECCSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred eccccCCCC-CCCCCceEEecCCCCeecccccccccchhhcchhhhhcC-CcEEEcCCccccccccHHhHHHHHHHHHHH
Confidence 999999875 6998885 443 2 3 579999997 99999999999999999
Q ss_pred HHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccC
Q 013216 147 KASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGA 226 (447)
Q Consensus 147 ~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~ 226 (447)
.+.+ .++++|+|+|+++||+| .|++.+++++ + +.|+++++|.+ |.+ .+..+.+|..+++|+++|+++|+|
T Consensus 156 ~~~~-~~~~~v~~~~~~~EE~g--~Ga~~~~~~~-~-~~d~~i~~d~~---~~g--~i~~~~~g~~~~~i~~~G~~~Hs~ 225 (417)
T 1fno_A 156 KGNP-IPHGDIKVAFTPDEEVG--KGAKHFDVEA-F-GAQWAYTVDGG---GVG--ELEFENFNAASVNIKIVGNNVHPG 225 (417)
T ss_dssp HSSS-CCCCCEEEEEESCGGGT--CTTTTCCHHH-H-CCSEEEECCCC---STT--BEECCBCEEEEEEEEEECBCCCGG
T ss_pred HhCC-CCCCcEEEEEEeccccC--CChhhhchhh-c-CCCEEEEeCCC---CcC--eeEEecCCceeEEEEEEeeccCCC
Confidence 9988 68899999999999987 4888776443 3 36788888753 333 577889999999999999999999
Q ss_pred -CCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCC
Q 013216 227 -KLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTT 304 (447)
Q Consensus 227 -~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~ 304 (447)
.|+.+ ||+..+++++..|+.+.... ......++++++.+++| |++|++.+|+|+.+.+
T Consensus 226 ~~p~~g~nAi~~~a~~i~~l~~~~~~~--------~~~~~~~~~~v~~i~gG------------p~~a~~~~d~R~~~~~ 285 (417)
T 1fno_A 226 TAKGVMVNALSLAARIHAEVPADEAPE--------TTEGYEGFYHLASMKGT------------VDRAEMHYIIRDFDRK 285 (417)
T ss_dssp GCTTTCBCHHHHHHHHHHTSCTTSSGG--------GCCTTCCEEEEEEEEEC------------SSEEEEEEEEEESSHH
T ss_pred CCccccCCHHHHHHHHHHhhhccCCcc--------cccccccEEEEEEEeec------------cCeEEEEEEEeCCCHH
Confidence 58888 99999999999887653211 01112346777777754 8999999999999999
Q ss_pred CHHHHHHHHHHHhccC--CCC----ceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCC
Q 013216 305 DAESLERRIVEEWAPA--SRN----MTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPA 378 (447)
Q Consensus 305 ~~~~i~~~i~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g 378 (447)
+.+.+.++|+++++.. .++ ++++ +. ..+.|....+..++++++.+.+++++++... .+..+.|
T Consensus 286 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~~~g 354 (417)
T 1fno_A 286 QFEARKRKMMEIAKKVGKGLHPDCYIELV---IE-------DSYYNMREKVVEHPHILDIAQQAMRDCHITP-EMKPIRG 354 (417)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCTTCCEEEE---EE-------EEECCCHHHHHTSTHHHHHHHHHHHHTTCCC-BCCCBSS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCceEEEE---Ee-------ccccchhccccCCCHHHHHHHHHHHHcCCCc-eecccee
Confidence 9999999999888632 222 4444 32 1222221134568999999999999975543 4556679
Q ss_pred CcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhhccC
Q 013216 379 STDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASYVQH 437 (447)
Q Consensus 379 ~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~~~~~ 437 (447)
++|+++|...|+|++.|||+.. ..|++||+++++++.+++++|..++..+++..+.
T Consensus 355 gtD~~~~~~~gip~v~~G~~~~---~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~~~~~ 410 (417)
T 1fno_A 355 GTDGAQLSFMGLPCPNLFTGGY---NYHGKHEFVTLEGMEKAVQVIVRIAELTAKRGQL 410 (417)
T ss_dssp CCHHHHHTTTTCCCCEECCSEE---STTSTTCEEEHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred ccchHhHHhcCCCEEEEcCCCC---CCCCcccccCHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 9999999988999999999865 4899999999999999999999999999876543
No 21
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=100.00 E-value=1.3e-47 Score=393.50 Aligned_cols=355 Identities=13% Similarity=0.151 Sum_probs=279.7
Q ss_pred CCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCC--CCCCeEEEeecccc
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSN--PQLPSILLNSHTDV 101 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~--~~~~~ill~~H~Dt 101 (447)
+.+.+++++++++|++|||+| ++|.++++||.++|+++|++++.. ...|+++.++|+. ++.|+|+|+||||+
T Consensus 7 ~~~~~~~~~~~~~l~~ips~s--~~e~~~~~~l~~~l~~~G~~~~~~----~~~nv~a~~~g~~g~~~~~~i~l~aH~D~ 80 (487)
T 2qyv_A 7 SLQPKLLWQWFDQICAIPHPS--YKEEQLAQFIINWAKTKGFFAERD----EVGNVLIRKPATVGMENRKPVVLQAHLDM 80 (487)
T ss_dssp CSSSHHHHHHHHHHHHSCCBT--TCCHHHHHHHHHHHHHTTCEEEEC----TTCCEEEEECCCTTCTTBCCEEEEEESCB
T ss_pred ccCHHHHHHHHHHHHcCCCCC--CcHHHHHHHHHHHHHHcCCEEEEc----CCCcEEEEeCCCCCCCCCCeEEEEccCCc
Confidence 557889999999999999985 788999999999999999987642 3359999998742 34589999999999
Q ss_pred CCCCCC----CCCcCCCceeeCCCCcEEecCcc---cchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHH
Q 013216 102 VPSEPS----KWSHHPFGAHLDSQGNIFARGSQ---DMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAE 174 (447)
Q Consensus 102 vp~~~~----~W~~~Pf~~~~~~~g~l~GrG~~---D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~ 174 (447)
||.++. +|+++||++.++ ||++||||++ |||++++++|.+++. .+ .++++|.|+|+++||+|+ .|++
T Consensus 81 vp~~~~~~~~~w~~~p~~~~~~-dg~l~g~G~~lgaD~k~g~a~~l~a~~~---~~-~~~~~v~~~~~~~EE~g~-~Ga~ 154 (487)
T 2qyv_A 81 VPQANEGTNHNFDQDPILPYID-GDWVKAKGTTLGADNGIGMASALAVLES---ND-IAHPELEVLLTMTEERGM-EGAI 154 (487)
T ss_dssp CCC----------CCCCCEEEC-SSEEEETTBCCCHHHHHHHHHHHHHHHC---SS-SCCSSEEEEEESCTTTTC-HHHH
T ss_pred cCCCCCCCccccccCCeeEEee-CCEEEeCCCCcCCcCHHHHHHHHHHHHh---CC-CCCCCEEEEEEeccccCC-HHHH
Confidence 999864 899999999997 9999999997 999999999999863 34 367899999999999885 6999
Q ss_pred HHHccccccCCceEEEEecCCcCcCCcceeEeeeeee-----------------EEEEEEEee-cCCccCCC-CCC--CH
Q 013216 175 KFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCP-----------------WWLVIKARG-APGHGAKL-YDN--SA 233 (447)
Q Consensus 175 ~~~~~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~-----------------~~~~i~v~G-~~~Hs~~p-~~g--na 233 (447)
.+++++ ++ .|+++++|.+. ...+..+.+|. .+++|+++| +++|||.| +.+ ||
T Consensus 155 ~~~~~~-~~-~d~~~~~d~~~-----~~~i~~g~~g~~~~~~~~~~~~~~~~~g~~~~i~v~G~~~~Hsg~~~~~g~~nA 227 (487)
T 2qyv_A 155 GLRPNW-LR-SEILINTDTEE-----NGEIYIGCAGGENADLELPIEYQVNNFEHCYQVVLKGLRGGHSGVDIHTGRANA 227 (487)
T ss_dssp TCCSSC-CC-CSEEEECCCCC-----TTEEEEEECEEEEEEEEEECCEEECCCSEEEEEEEECCCCCBTTTTTTSCCCCH
T ss_pred HHHHhc-cC-CCEEEEEccCC-----CCeEEEeccCCcceeeeccccccccCCCeEEEEEEEccCCccCCcccccCCCCH
Confidence 988754 43 67788776431 12355554443 779999999 89999987 553 99
Q ss_pred HHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEee---------------
Q 013216 234 MENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDI--------------- 298 (447)
Q Consensus 234 i~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~--------------- 298 (447)
+..+++++..|+.+.+ .++++++.+++|. +.|+||++|++.+++
T Consensus 228 i~~~~~~i~~l~~~~~---------------~~~~~v~~i~gG~------~~NvIP~~a~~~~~~~~~~~~~~~~~~~~~ 286 (487)
T 2qyv_A 228 IKVLLRFLAELQQNQP---------------HFDFTLANIRGGS------IRNAIPRESVATLVFNGDITVLQSAVQKFA 286 (487)
T ss_dssp HHHHHHHHHHHHHHCT---------------TCCEEEEEEEEES------CTTBCCCCEEEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccC---------------CCcEEEEEEeCCC------cCcccCCceEEEEEecCCHHHHHHHHHHHH
Confidence 9999999999876421 2478899999887 999999999999999
Q ss_pred -------------------------ecCCCCCHHHHHHHHHHHhcc----------------------------------
Q 013216 299 -------------------------RVPPTTDAESLERRIVEEWAP---------------------------------- 319 (447)
Q Consensus 299 -------------------------R~~~~~~~~~i~~~i~~~~~~---------------------------------- 319 (447)
|+.|.++.+.+.+.|++++..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~i~~~i~~~~~gv~~~~~~~~~~~~~s~nl~~~~~~~~~~~~~~~~ 366 (487)
T 2qyv_A 287 DVIKAELALTEPNLIFTLEKVEKPQQVFSSQCTKNIIHCLNVLPNGVVRNSDVIENVVETSLSIGVLKTEDNFVRSTMLV 366 (487)
T ss_dssp HHHHHHTTTTCTTCEEEEEECCCCSEEECHHHHHHHHHHHHHSCCEEEEECSSSTTCEEEEEEEEEEEECSSEEEEEEEE
T ss_pred HHHHHHhccCCCCeEEEEEeccccccccCHHHHHHHHHHHHhCCCcceeeccccCCceEeccceEEEEEcCCeEEEEEEc
Confidence 777777777777777665320
Q ss_pred -------------------CCCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCc
Q 013216 320 -------------------ASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPAST 380 (447)
Q Consensus 320 -------------------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~ 380 (447)
..++++++ +. ..+|++ ..+.++++++.+.++++++.+..+.+....|++
T Consensus 367 R~~~~~~~~~~~~~~~~~~~~~g~~~~---~~--------~~~p~~-~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~gg~ 434 (487)
T 2qyv_A 367 RSLIESGKSYVASLLKSLASLAQGNIN---LS--------GDYPGW-EPQSHSDILDLTKTIYAQVLGTDPEIKVIHAGL 434 (487)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHTCEEE---EE--------EEECCB-CCCSCCHHHHHHHHHHHHHHSSCCEEEEESSCC
T ss_pred cCCCHHHHHHHHHHHHHHHHHcCceEE---EC--------CCCCCC-CCCCCCHHHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 00122232 21 234444 355689999999999999655443556778999
Q ss_pred chHHHHHc--CCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 381 DARYFRER--GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 381 D~~~~~~~--g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
|+++|.+. |+|++.|||+.. ..|+|||+++++++.+++++|+.++..+++
T Consensus 435 D~~~~~~~~pg~~~v~~Gp~~~---~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 486 (487)
T 2qyv_A 435 ECGLLKKIYPTIDMVSIGPTIR---NAHSPDEKVHIPAVETYWKVLTGILAHIPS 486 (487)
T ss_dssp THHHHHHHCTTSEEEECCCCEE---STTSTTCEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred cHHHHHhhCCCCCEEEECCCCC---CCCCCCceeEHHHHHHHHHHHHHHHHHHhc
Confidence 99999886 788999999653 599999999999999999999999988753
No 22
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=100.00 E-value=1.3e-47 Score=392.76 Aligned_cols=368 Identities=14% Similarity=0.144 Sum_probs=284.9
Q ss_pred CCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCC--CCCCeEEEeecccc
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSN--PQLPSILLNSHTDV 101 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~--~~~~~ill~~H~Dt 101 (447)
+.+.+++++++++|++|||+| ++|.++++||.++|+++|++++. + ...|+++.++|+. .+.|+|+|+||||+
T Consensus 10 ~~~~~~~~~~~~~L~~ips~s--~~e~~~~~~l~~~l~~~G~~v~~-~---~~~nv~a~~~g~~g~~~~~~v~l~aH~D~ 83 (490)
T 3mru_A 10 TLSPAPLWQFFDKICSIPHPS--KHEEALAQYIVTWATEQGFDVRR-D---PTGNVFIKKPATPGMENKKGVVLQAHIDM 83 (490)
T ss_dssp GSSSHHHHHHHHHHHHSCCBT--TCCTTHHHHHHHHHHHTTCEEEE-C---TTCCEEEEECCCTTCTTCCCEEEEEECCB
T ss_pred ccCHHHHHHHHHHHhCCCCCC--CCHHHHHHHHHHHHHHcCCEEEE-c---CCCeEEEEEcCCCCCCCCCeEEEEeccCC
Confidence 457889999999999999985 78899999999999999998774 2 3459999998752 24689999999999
Q ss_pred CCCCC----CCCCcCCCceeeCCCCcEEecCcc---cchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHH
Q 013216 102 VPSEP----SKWSHHPFGAHLDSQGNIFARGSQ---DMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAE 174 (447)
Q Consensus 102 vp~~~----~~W~~~Pf~~~~~~~g~l~GrG~~---D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~ 174 (447)
||+.+ .+|+++||++.++ +|++||||++ |||+++|++|.+++ ....++++|.|+|+++||+|+ .|++
T Consensus 84 vp~~~~~~~~~w~~~p~~~~~~-~g~l~g~G~~lgaD~k~g~a~~l~~l~----~~~~~~~~v~~~~~~~EE~g~-~Ga~ 157 (490)
T 3mru_A 84 VPQKNEDTDHDFTQDPIQPYID-GEWVTAKGTTLGADNGIGMASCLAVLA----SKEIKHGPIEVLLTIDEEAGM-TGAF 157 (490)
T ss_dssp CCCBCTTSCCCTTTCCCCEEEE-TTEEEETTBCCCHHHHTTHHHHHHHHH----CSSCCCCSEEEEEESCSSSTT-GGGG
T ss_pred CCCCCCCcccccccCCceEEee-CCeEecCCCccCCCCHHHHHHHHHHHH----hCCCCCCCEEEEEEccccccc-HhHH
Confidence 99985 2799999999997 9999999996 99999999998752 333468999999999999985 7999
Q ss_pred HHHccccccCCceEEEEecCCc----------CcCCc---ceeEeeeeeeEEEEEEEee-cCCccCC-CCCC--CHHHHH
Q 013216 175 KFADSHVFNSLNVGIVLDEGLA----------STTED---YRAFYAERCPWWLVIKARG-APGHGAK-LYDN--SAMENL 237 (447)
Q Consensus 175 ~~~~~~~~~~~~~~~~~d~g~~----------~p~~~---~~i~~~~~G~~~~~i~v~G-~~~Hs~~-p~~g--nai~~~ 237 (447)
.+++. .+ +.++++++|.+.. .|+.. .....+++|..+++|+++| +++|+|. |+.| ||+..+
T Consensus 158 ~~~~~-~~-~~~~~~~~d~~~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p~~g~~nai~~~ 235 (490)
T 3mru_A 158 GLEAG-WL-KGDILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLI 235 (490)
T ss_dssp TCCSS-SC-CSSEEEECCCCCTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCCEETTTSSSSCCCCHHHHH
T ss_pred Hhhhc-cc-CCCEEEEcCCCCCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCCcccccccccCCcCHHHHH
Confidence 98764 33 3578888885311 01000 0012456899999999999 9999996 7876 999999
Q ss_pred HHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHh
Q 013216 238 FKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEW 317 (447)
Q Consensus 238 ~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~ 317 (447)
++++..|+.. ++++++.+++|. +.|+||++|++.+++|..+.+..+++.+++.+.+
T Consensus 236 ~~~l~~l~~~------------------~~~~v~~i~gG~------~~NvIP~~a~~~~~iR~~~~~~~~~~~~~~~~~~ 291 (490)
T 3mru_A 236 GRFLAGHAQE------------------LDLRLVEFRGGS------LRNAIPREAFVTVALPAENQDKLAELFNYYTELL 291 (490)
T ss_dssp HHHHHHHTTT------------------TTCEEEEEEECS------CTTEECCCEEEEEEEEGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc------------------CcEEEEEEECCC------CCcccCCccEEEEEECcccHHHHHHHHHHHHHHH
Confidence 9999988641 368899999987 9999999999999999887666666666665544
Q ss_pred cc----CCCCceEeecc---------------------------------------------------------cccc--
Q 013216 318 AP----ASRNMTFELGQ---------------------------------------------------------FKQR-- 334 (447)
Q Consensus 318 ~~----~~~~~~~~~~~---------------------------------------------------------~~~~-- 334 (447)
+. ....++++... +..+
T Consensus 292 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~l~~~~~G~~~~~~~~~g~v~~S~n~gv~~~~~~~~~~~~~~R~~ 371 (490)
T 3mru_A 292 KTELGKIETDIVTFNEEVATDAQVFAIADQQRFIAALNACPNGVMRMSDEVEGVVETSLNVGVITTEENKVTVLCLIRSL 371 (490)
T ss_dssp HHHHTTTCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHSCCEEEEECTTTTSCEEEEEEEEEEEEETTEEEEEEEEEES
T ss_pred HHHhhccCCCeEEEEEecCCccccCCHHHHHHHHHHHHHCCCccceeccccCCCeeEEEEEEEEEEeCCEEEEEEEcCCC
Confidence 31 11111111000 0000
Q ss_pred --------------------ccccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHc--CCCe
Q 013216 335 --------------------ASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRER--GLPA 392 (447)
Q Consensus 335 --------------------~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~--g~p~ 392 (447)
.++.....+|++ ..+.++++++.+.++++++.+..+.+..++|++|+++|.+. ++|+
T Consensus 372 ~~~~~~~i~~~l~~~~~~~g~~~~~~~~~p~~-~~~~d~~lv~~l~~a~~~~~G~~~~~~~~ggg~d~~~~~~~~p~~~~ 450 (490)
T 3mru_A 372 IDSGRSQVEGMLQSVAELAGAQIEFSGAYPGW-KPDADSEIMAIFRDMYEGIYGHKPNIMVIHAGLECGLFKEPYPNMDM 450 (490)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCEEEEEEEECCB-CCCTTCHHHHHHHHHHHTTSSSCCCCEEESSCCHHHHTTSSCTTCEE
T ss_pred CchHHHHHHHHHHHHHHHcCCeEEecCCCCCC-CCCCCCHHHHHHHHHHHHHHCCCCeEEEEEecHHHHHHHHhCCCCCE
Confidence 001112344555 45778999999999999985554477788899999999987 6779
Q ss_pred EEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 393 IGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 393 ~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
+.|||+.. ..|+|||+++++++.+++++|.+++..+.+
T Consensus 451 v~fGp~~~---~~H~p~E~v~i~~l~~~~~~l~~~l~~l~~ 488 (490)
T 3mru_A 451 VSFGPTIK---FPHSPDEKVKIDTVQLFWDQMVALLEAIPE 488 (490)
T ss_dssp EECCCCEE---STTSTTCEEEHHHHHHHHHHHHHHHHHCCC
T ss_pred EEECCCCC---CCCCCCccccHHHHHHHHHHHHHHHHHhhh
Confidence 99999865 599999999999999999999999988753
No 23
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.3e-46 Score=384.68 Aligned_cols=370 Identities=18% Similarity=0.272 Sum_probs=275.2
Q ss_pred CCChhHHHHHHHhhhcccCCCCCC----------ChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeE
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPNP----------DYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSI 93 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~~----------~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i 93 (447)
+.+.+++++++++|++|||+|... ++.++++||.++|+++|++++.. +..++++.+ |. +.|+|
T Consensus 10 ~~~~~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~----~~~~~~~~~-g~--~~~~i 82 (470)
T 1lfw_A 10 EAKKDAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENF----ANYAGRVNF-GA--GDKRL 82 (470)
T ss_dssp HTTHHHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE----TTTEEEEEE-CC--CSSEE
T ss_pred HHhHHHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEe----cCeEEEEEe-CC--CCCeE
Confidence 457889999999999999997321 23689999999999999988743 345778877 54 35899
Q ss_pred EEeeccccCCCCCCCCCcCCCceee-CCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccC
Q 013216 94 LLNSHTDVVPSEPSKWSHHPFGAHL-DSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDG 172 (447)
Q Consensus 94 ll~~H~Dtvp~~~~~W~~~Pf~~~~-~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G 172 (447)
+|+|||||||+++ +|+++||++.+ + ||++||||++|||++++++|.|++.|++.+.+++++|+|+|+++||+|+ .|
T Consensus 83 ~l~~H~D~vp~~~-~w~~~Pf~~~~~~-~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~~i~~~~EE~g~-~G 159 (470)
T 1lfw_A 83 GIIGHMDVVPAGE-GWTRDPFKMEIDE-EGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNW-VG 159 (470)
T ss_dssp EEEEECCBCCCCS-CCSSCTTSCEECT-TCEEESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEEEEEESCTTTTC-HH
T ss_pred EEEEeecccCCCC-CccCCCcceeEee-CCEEECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCcccCC-cc
Confidence 9999999999975 89999999999 8 9999999999999999999999999999888889999999999999986 69
Q ss_pred HHHHHccccccC----CceE--EEEec-CCc------C-c--CCc-----------cee-------Ee------------
Q 013216 173 AEKFADSHVFNS----LNVG--IVLDE-GLA------S-T--TED-----------YRA-------FY------------ 206 (447)
Q Consensus 173 ~~~~~~~~~~~~----~~~~--~~~d~-g~~------~-p--~~~-----------~~i-------~~------------ 206 (447)
++.+++++.... .|.. +++.. |.. . + .+. ..+ ..
T Consensus 160 ~~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~ 239 (470)
T 1lfw_A 160 IDYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKNDDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLAY 239 (470)
T ss_dssp HHHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECCCCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHHHH
T ss_pred HHHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEccCCcCCCcceeeeecCCcCCcccccceEEecccchHHHHHHH
Confidence 999987643211 1110 11100 000 0 0 000 001 11
Q ss_pred -------eeeeeE-----EEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhch--hhhHHHHHhcc--ccCC------
Q 013216 207 -------AERCPW-----WLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFR--ASQFDLVKAGL--KAEG------ 263 (447)
Q Consensus 207 -------~~~G~~-----~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~--~~~~~~~~~~~--~~~~------ 263 (447)
+.+|.. +++|+++|+++|++.|+.+ ||+..+++++..|+.-. ....+.+.... ...+
T Consensus 240 ~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 319 (470)
T 1lfw_A 240 ESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDFYGKKLGIF 319 (470)
T ss_dssp HHHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTTCTTSTTTTCC
T ss_pred HHHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCCCCcccccCCc
Confidence 246765 8999999999999999988 99999999988774110 00011111000 0000
Q ss_pred ------CcceeeeeeeecCCCCCCCccccccCCc-eEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeecccccccc
Q 013216 264 ------EVVSVNMAFLKAGTPSPNGFVMNLQPSE-AEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRAS 336 (447)
Q Consensus 264 ------~~~t~~~~~i~~g~~~~~~~~~n~iP~~-~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~ 336 (447)
..++++++ ..|.+|++ |++.+|+|+++.++.+.+.++|+++++. +++++ +.
T Consensus 320 ~~~~~~~~~t~~~g------------~i~~~p~~~a~~~~diR~~~~~~~~~i~~~i~~~~~~---g~~v~---~~---- 377 (470)
T 1lfw_A 320 HHDDLMGDLASSPS------------MFDYEHAGKASLLNNVRYPQGTDPDTMIKQVLDKFSG---ILDVT---YN---- 377 (470)
T ss_dssp CEETTTEECEEEEE------------EEEEETTSCEEEEEEEEECTTCCHHHHHHHHHHHHTT---TEEEE---CS----
T ss_pred ccccccccceEEEE------------EEEEcCCceEEEEEEEecCCCCCHHHHHHHHHHHhcC---CeEEE---EE----
Confidence 11344444 34567999 9999999999999999999999998864 55555 33
Q ss_pred ccccCCCCcccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCC-CCCCCCCCccccHH
Q 013216 337 LHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANT-PILLHDHNEFLNQA 415 (447)
Q Consensus 337 ~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~-~~~~H~~~E~v~~~ 415 (447)
..+|++ .++.++++++.+.++++++.+..+.+..++|++|++++. |++.|||...+ ....|+|||+++++
T Consensus 378 ----~~~~~~-~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~g~~d~~~~~----~~v~~G~~~pg~~~~~H~~~E~i~~~ 448 (470)
T 1lfw_A 378 ----GFEEPH-YVPGSDPMVQTLLKVYEKQTGKPGHEVVIGGGTYGRLFE----RGVAFGAQPENGPMVMHAANEFMMLD 448 (470)
T ss_dssp ----CCBCCE-ECCTTCHHHHHHHHHHHHHHCCCCCEEEESSCCGGGGST----TCEECCEECTTCCCCTTSTTCEEEHH
T ss_pred ----eCCCce-eeCCCCHHHHHHHHHHHHHcCCCCceeeecCHhHHHhCC----CeEEECCCCCCCCCCCCCCCcceEHH
Confidence 233443 456789999999999999654433556777999999885 68899975311 23689999999999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 013216 416 EYLKGIDIYESIIKAYASY 434 (447)
Q Consensus 416 ~l~~~~~~~~~~l~~l~~~ 434 (447)
++.+++++|+.++..++..
T Consensus 449 ~l~~~~~~~~~~~~~l~~~ 467 (470)
T 1lfw_A 449 DLILSIAIYAEAIYELTKD 467 (470)
T ss_dssp HHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 9999999999999998753
No 24
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=1.5e-45 Score=367.80 Aligned_cols=351 Identities=16% Similarity=0.157 Sum_probs=274.2
Q ss_pred CCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCC
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVP 103 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp 103 (447)
+...+++++++++|+++||+| ++|.++++||.++|+++|++++... ..+++|++++++|..+ +|+|+|+|||||||
T Consensus 12 ~~~~~~~~~~~~~l~~~pe~s--~~E~~~~~~i~~~l~~~G~~v~~~~-~g~~~~via~~~g~~~-g~~i~l~ah~D~vp 87 (394)
T 3ram_A 12 ETNKYSYIEISHRIHERPELG--NEEIFASRTLIDRLKEHDFEIETEI-AGHATGFIATYDSGLD-GPAIGFLAEYDALP 87 (394)
T ss_dssp HHTHHHHHHHHHHHHHSCCCT--TCCHHHHHHHHHHHHHTTCEEEEEE-TTEEEEEEEEEECSSS-SCEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHHHHhCCCCC--cchHHHHHHHHHHHHHcCCeEEeCC-CCCceEEEEEEeCCCC-CCEEEEEEecccCC
Confidence 457789999999999999985 7899999999999999999987543 2236799999987654 48999999999999
Q ss_pred CCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHH-HHHccccc
Q 013216 104 SEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAE-KFADSHVF 182 (447)
Q Consensus 104 ~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~-~~~~~~~~ 182 (447)
. ++||||+ |++ .+++|.|++.|.+.+..++++|.|+|+++||+++..|++ .+++.+.+
T Consensus 88 g------------------~~ha~G~-d~~--~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~g~~ 146 (394)
T 3ram_A 88 G------------------LGHACGH-NII--GTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVI 146 (394)
T ss_dssp T------------------TSSTTCH-HHH--HHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHHTGG
T ss_pred C------------------cceECCc-cHH--HHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHHcCCc
Confidence 2 3467774 554 467888999998876678999999999999987336999 99998877
Q ss_pred cCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccC-CCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccc
Q 013216 183 NSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGA-KLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLK 260 (447)
Q Consensus 183 ~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~-~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 260 (447)
+++|+++.++. +....+..+.+|..+++|+++|+++|+| .|+.| ||+..+++++..|+.+....
T Consensus 147 ~~~d~~~~~h~-----~~~~~~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l~~~~--------- 212 (394)
T 3ram_A 147 DQIDIALMIHP-----GNETYKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHI--------- 212 (394)
T ss_dssp GGCSEEECCEE-----ESSBBCCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHHGGGS---------
T ss_pred ccCCEEEEECC-----ccccCCCccccceeEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHHHhhC---------
Confidence 77888887753 2223455678999999999999999999 89999 99999999999998764311
Q ss_pred cCCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc--CCCCceEeecccccccccc
Q 013216 261 AEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQRASLH 338 (447)
Q Consensus 261 ~~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~ 338 (447)
...++++++.+++|. +.|+||++|++.+++|+.+.++.+.+.++|+++++. ..++++++ ++..
T Consensus 213 --~~~~~~~~~~i~gG~------~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~e---i~~~---- 277 (394)
T 3ram_A 213 --KKDQRVHGVILDGGK------AANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYE---FGPI---- 277 (394)
T ss_dssp --CTTCEEEEEEEEBCS------CTTBCCSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEE---EEES----
T ss_pred --CCCCeeEEEEEECCC------CCceeCCeEEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCeEE---EEEe----
Confidence 112456677778876 999999999999999999999999999999988863 23456666 4410
Q ss_pred ccCCCCcccccCCCChHHHHHHHHHHHhcCCCC-CceecCCCcchHHHHHcCCCeEE-EccCCCCCCCCCCCCcc-----
Q 013216 339 DKFGRPILTATDSSNPWWNLLEEAVRKANGKLG-KPEIFPASTDARYFRERGLPAIG-FSPMANTPILLHDHNEF----- 411 (447)
Q Consensus 339 ~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~g~~D~~~~~~~g~p~~~-~gp~~~~~~~~H~~~E~----- 411 (447)
...+ +++.+|.++++.++++++++| ... .+..+.|++|+++|.. .+|++. |-+...+....|+| |+
T Consensus 278 -~~~~---~~~~~d~~l~~~~~~a~~~~G-~~~~~~~~~~g~~D~~~~~~-~~P~~~~~~g~~~~~~~~H~~-ef~~~~~ 350 (394)
T 3ram_A 278 -QNGV---NEFIKTPKLDDLFAKYAEEVG-EAVIDDDFGYGSTDTGNVSH-VVPTIHPHIKIGSRNLVGHTH-RFREAAA 350 (394)
T ss_dssp -SCCB---CCCCCCHHHHHHHHHHHHHTT-CCBCCSCCCCBCCTHHHHTT-TSCBCCCEEECSCTTCCTTSH-HHHHHTT
T ss_pred -cCCC---CCccCCHHHHHHHHHHHHHhC-cccccCCCCcccccHHHHHH-HhchheEEeeecCCCCCCCCH-HHHhccC
Confidence 1222 245678999999999999976 431 2345678999999986 488763 22222112358999 66
Q ss_pred --ccHHHHHHHHHHHHHHHHHHHhhc
Q 013216 412 --LNQAEYLKGIDIYESIIKAYASYV 435 (447)
Q Consensus 412 --v~~~~l~~~~~~~~~~l~~l~~~~ 435 (447)
++.+++..++++|+.++.+++.-+
T Consensus 351 ~~~~~~~l~~g~~~la~~~~~~l~~~ 376 (394)
T 3ram_A 351 SVHGDEALIKGAKIMALMGLELITNQ 376 (394)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred CCccHHHHHHHHHHHHHHHHHHhcCH
Confidence 599999999999999999987533
No 25
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=4.2e-43 Score=352.32 Aligned_cols=348 Identities=15% Similarity=0.132 Sum_probs=275.6
Q ss_pred ChhHHHHHHHhhhcccCCC--------CCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEee
Q 013216 26 SDDSIIERFRAYLQIDTSQ--------PNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNS 97 (447)
Q Consensus 26 ~~~~~~~~l~~l~~ips~s--------~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~ 97 (447)
+.++++++|++|++|||.+ .+++|.++++||.++|+++|++++. + ...|+++.++|++++.|+|+|.+
T Consensus 3 ~~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~-d---~~gnv~a~~~g~~~~~~~i~l~a 78 (408)
T 3n5f_A 3 QGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYE-D---AAGNLIGRKEGTNPDATVVLVGS 78 (408)
T ss_dssp CHHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEE-C---TTCCEEEEECCSSTTSCEEEEEE
T ss_pred CHHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEE-c---CCCCEEEEecCCCCCCCEEEEEe
Confidence 5688999999999999954 2578999999999999999998875 2 23399999988765469999999
Q ss_pred ccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccC----cccCH
Q 013216 98 HTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG----GHDGA 173 (447)
Q Consensus 98 H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g----~~~G~ 173 (447)
|||+||.+ |..|+|++++++|.+++.|.+.+.+++++|.|+|+++||.+ ++.|+
T Consensus 79 H~D~v~~~----------------------g~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs 136 (408)
T 3n5f_A 79 HLDSVYNG----------------------GCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGS 136 (408)
T ss_dssp ESCCCTTB----------------------CSSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHH
T ss_pred cCCCCCCC----------------------CccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCH
Confidence 99999963 45799999999999999999998889999999999999973 34689
Q ss_pred HHHHcc------------cc---------------c-----c--CCceEEEEec--CCc-Cc-CCcceeEeeeeeeEEEE
Q 013216 174 EKFADS------------HV---------------F-----N--SLNVGIVLDE--GLA-ST-TEDYRAFYAERCPWWLV 215 (447)
Q Consensus 174 ~~~~~~------------~~---------------~-----~--~~~~~~~~d~--g~~-~p-~~~~~i~~~~~G~~~~~ 215 (447)
+.++.. +. + + +++..+.++. |.. ++ .....++.+.+|..+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~ 216 (408)
T 3n5f_A 137 RAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVK 216 (408)
T ss_dssp HHHHTCCCGGGGSCBCTTCCBHHHHHHHTTCCGGGGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEEEEECEEEEEE
T ss_pred HHHHcCCCHHHhhccCCCCCCHHHHHHHhCCChhhhhhcccCccCccEEEEEeeccchhHHHcCCCeEEEEEeccceEEE
Confidence 888721 11 1 1 2343444432 210 11 11356788999999999
Q ss_pred EEEeecCCcc-CCCC-CC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecC-CCCCCCccccccCCc
Q 013216 216 IKARGAPGHG-AKLY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAG-TPSPNGFVMNLQPSE 291 (447)
Q Consensus 216 i~v~G~~~Hs-~~p~-~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g-~~~~~~~~~n~iP~~ 291 (447)
|+++|+++|+ +.|+ .+ ||+..+++++..|+.+... . . .++++++.+++| . +.|+||++
T Consensus 217 i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l~~~~~~----~-------~-~~~~~vg~i~gG~~------~~NvIP~~ 278 (408)
T 3n5f_A 217 FTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEARR----T-------G-TTVGTVGQLHVYPG------GINVIPER 278 (408)
T ss_dssp EEEECCCEETTTSCTTTCCCHHHHHHHHHHHHHHHHHH----H-------S-SCEEEEEEEEEESC------CTTEECSE
T ss_pred EEEEEEcCcCCCCccccccCHHHHHHHHHHHHHHHHHh----c-------C-CcEEEEEEEEecCC------CCcCcCCe
Confidence 9999999999 5794 77 9999999999999876421 1 1 368999999987 5 89999999
Q ss_pred eEEEEeeecCCCCCHHHHHHHHHHHhcc--CCCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCC
Q 013216 292 AEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGK 369 (447)
Q Consensus 292 ~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~ 369 (447)
|++.+|+|+.+.++.+++.++|+++++. ..++++++ ++. ...+|+ +..+.++++.+++++++++..
T Consensus 279 a~~~~diR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~~---i~~------~~~~p~---~~~d~~l~~~~~~a~~~~g~~ 346 (408)
T 3n5f_A 279 VEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRVT---TER------LQEMPP---VLCSDEVKRAAEAACQKLGYP 346 (408)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEE---EEE------EEEECC---EECCHHHHHHHHHHHHHHTCC
T ss_pred EEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEE---EEE------ecCCCC---cCCCHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999988763 23455666 442 223333 345789999999999998644
Q ss_pred CCCceecCCCcchHHHHHcCCCe-EEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 370 LGKPEIFPASTDARYFRERGLPA-IGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 370 ~~~~~~~~g~~D~~~~~~~g~p~-~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
. .+....|++|+++|.+. +|+ +.|+|+... ..|+|||+++++++.+++++|+.++.++++
T Consensus 347 ~-~~~~~~ggtD~~~~~~~-iP~~~~~~~~~~~--~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 407 (408)
T 3n5f_A 347 S-FWLPSGAAHDSVQLAPI-CPIGMIFVRSQDG--VSHSPAEWSTKEDCAAGAEVLYHTVWQLAQ 407 (408)
T ss_dssp C-CEEEESSCCTTTTTTTT-SCEEEEEECCGGG--CCSSTTCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred c-ccCCCcCchHHHHHHHH-CCEEEEEeCCCCC--CCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 3 45566799999999887 997 578887653 589999999999999999999999998853
No 26
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=4.4e-43 Score=358.30 Aligned_cols=351 Identities=15% Similarity=0.181 Sum_probs=276.1
Q ss_pred CCChhHHHHHHHhh-hcccCCC-----C----------CCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCC
Q 013216 24 AKSDDSIIERFRAY-LQIDTSQ-----P----------NPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSN 87 (447)
Q Consensus 24 ~~~~~~~~~~l~~l-~~ips~s-----~----------~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~ 87 (447)
+.+.++++++|++| ++|||+| + +++|.++++||.++|+++|++++. + ...|++++++|.+
T Consensus 28 ~~~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~-d---~~gnvia~~~g~~ 103 (474)
T 2v8h_A 28 SIASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKV-D---KIGNMFAVYPGKN 103 (474)
T ss_dssp CCCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEE-B---TTCCEEEEECCSS
T ss_pred cCCHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEE-e---cCceEEEEECCCC
Confidence 56789999999999 9999985 2 457889999999999999998763 2 3348999998765
Q ss_pred CCCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCccc
Q 013216 88 PQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (447)
Q Consensus 88 ~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (447)
++ ++|+|+|||||||.+ |+ .|+|++++++|.|++.|.+.+.+++++|.|+|+++||+
T Consensus 104 ~~-~~i~l~~H~DtVp~~----------------g~------~D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE~ 160 (474)
T 2v8h_A 104 GG-KPTATGSHLDTQPEA----------------GK------YDGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAEG 160 (474)
T ss_dssp CC-SCEEEEECCCCCSSB----------------CS------STTHHHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCSC
T ss_pred CC-CeEEEEEecccCCCC----------------CC------cCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccC
Confidence 43 689999999999974 22 39999999999999999999888899999999999998
Q ss_pred C----cccCHHHHHccc---------c-----------------c----------cCCceEEEEec--CCc-C-cCCcce
Q 013216 168 G----GHDGAEKFADSH---------V-----------------F----------NSLNVGIVLDE--GLA-S-TTEDYR 203 (447)
Q Consensus 168 g----~~~G~~~~~~~~---------~-----------------~----------~~~~~~~~~d~--g~~-~-p~~~~~ 203 (447)
+ ++.|++.+.+.. . + .+++..+.++. |.. . ......
T Consensus 161 ~~~~~g~~Gs~~l~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~~~e~~~~~~~lHi~~g~~l~~~g~~~~ 240 (474)
T 2v8h_A 161 ARFARSCTGSSVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKAIG 240 (474)
T ss_dssp SSSSCTTHHHHHHTTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCTTTSCCSEEEEEEECCSSHHHHTTCSEE
T ss_pred CCCCCCcccHHHHHhccCHhhhhhhcccccccCccHHHHHHhcCCcccccccccccchhhheeeeeccCccccccCCcce
Confidence 3 345888886410 0 0 12233333321 100 0 001356
Q ss_pred eEeeeeeeEEEEEEEeecCCccCC-CC-CC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecC-CCC
Q 013216 204 AFYAERCPWWLVIKARGAPGHGAK-LY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAG-TPS 279 (447)
Q Consensus 204 i~~~~~G~~~~~i~v~G~~~Hs~~-p~-~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g-~~~ 279 (447)
++.+.+|..+++|+++|+++|+|. |+ .+ ||+..+++++..|+.+.... .++++++.|++| .
T Consensus 241 i~~~~~G~~~~~i~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-------------~~t~~vg~i~gG~~-- 305 (474)
T 2v8h_A 241 IVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-------------NGLFTCGIIDAKPY-- 305 (474)
T ss_dssp EEEEECEEEEEEEEEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT-------------TCEEECCCEEEESC--
T ss_pred eEEeecceEEEEEEEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc-------------CCEEEEEEEEecCC--
Confidence 788999999999999999999995 87 67 99999999999987653210 358999999987 5
Q ss_pred CCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhcc--CC---CCceEeeccccccccccccCCCCcccccCCCCh
Q 013216 280 PNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--AS---RNMTFELGQFKQRASLHDKFGRPILTATDSSNP 354 (447)
Q Consensus 280 ~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 354 (447)
+.|+||++|++.+|+|+.+.++.+++.++|+++++. .. ++++++ ++. ...+|++ ..+++
T Consensus 306 ----~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~~~~g~~~~---~~~------~~~~~~~---~~d~~ 369 (474)
T 2v8h_A 306 ----SVNIIPGEVSFTLDFRHPSDDVLATMLKEAAAEFDRLIKINDGGALSYE---SET------LQVSPAV---NFHEV 369 (474)
T ss_dssp ----CTTEECSEEEEEEEEEESCHHHHHHHHHHHHHHHHHHTTCCTTCCCEEE---EEE------EEEECCE---ECCHH
T ss_pred ----CCceeCCEEEEEEEecCCChHHHHHHHHHHHHHHHHHHhhcccCCcEEE---EEE------ecCCCCc---cCCHH
Confidence 899999999999999999999999999999988863 22 456666 432 2233433 44789
Q ss_pred HHHHHHHHHHHhc-CCCCCceecCCCcchHHHHHcCCCe-EEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013216 355 WWNLLEEAVRKAN-GKLGKPEIFPASTDARYFRERGLPA-IGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 432 (447)
Q Consensus 355 ~~~~~~~a~~~~~-~~~~~~~~~~g~~D~~~~~~~g~p~-~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~ 432 (447)
+++.+.+++++++ ...+.+....|++|+++|.+. +|+ +.|||+... ..|+|||+++++++.+++++|+.++..++
T Consensus 370 l~~~~~~a~~~~G~~~~~~~~~~~ggtD~~~~~~~-~P~~~~fgp~~~~--~~H~p~E~i~~~~l~~~~~~~~~~l~~l~ 446 (474)
T 2v8h_A 370 CIECVSRSAFAQFKKDQVRQIWSGAGHDSCQTAPH-VPTSMIFIPSKDG--LSHNYYEYSSPEEIENGFKVLLQAIINYD 446 (474)
T ss_dssp HHHHHHHHHHHHSCGGGEEEEEESSCCTHHHHTTT-SCEEEEEECCGGG--CCSSTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCcceecCCcCCccHHHHHhh-CCEEEEEeCCCCC--CCCCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999995 303255677899999999987 887 789998553 69999999999999999999999999987
Q ss_pred hhc
Q 013216 433 SYV 435 (447)
Q Consensus 433 ~~~ 435 (447)
+..
T Consensus 447 ~~~ 449 (474)
T 2v8h_A 447 NYR 449 (474)
T ss_dssp HHH
T ss_pred HhH
Confidence 643
No 27
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=2.7e-43 Score=355.46 Aligned_cols=351 Identities=15% Similarity=0.161 Sum_probs=274.4
Q ss_pred ChhHHHHHHHhhhcccCCCCC--------CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEee
Q 013216 26 SDDSIIERFRAYLQIDTSQPN--------PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNS 97 (447)
Q Consensus 26 ~~~~~~~~l~~l~~ips~s~~--------~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~ 97 (447)
+.++++++|++|++|||+|+. ++|.++++||.++|+++|++++. + ...|++++++|.+++.|+|+|+|
T Consensus 7 ~~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~-~---~~gnv~a~~~g~~~~~~~i~l~~ 82 (423)
T 1z2l_A 7 FRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRF-D---EVGNLYGRLNGTEYPQEVVLSGS 82 (423)
T ss_dssp HHHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEE-C---TTSCEEEEECCSSEEEEEEEEEE
T ss_pred cHHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEE-e---cCCcEEEEEcCCCCCCCEEEEEE
Confidence 568899999999999998732 46889999999999999998764 2 23499999987654348999999
Q ss_pred ccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccC----cccCH
Q 013216 98 HTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG----GHDGA 173 (447)
Q Consensus 98 H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g----~~~G~ 173 (447)
||||||.+ |..|+|++++++|.|++.|.+.+.+++++|.|+|+++||++ ++.|+
T Consensus 83 H~D~Vp~~----------------------g~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs 140 (423)
T 1z2l_A 83 HIDTVVNG----------------------GNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGS 140 (423)
T ss_dssp ECCCCTTB----------------------CSSTTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHH
T ss_pred ecCCCCCC----------------------CccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCcccH
Confidence 99999963 33689999999999999999988788999999999999985 23488
Q ss_pred HHHHc----cccc-----------------------------cCCceEEEEec--CC-cCcCC-cceeEeeeeeeEEEEE
Q 013216 174 EKFAD----SHVF-----------------------------NSLNVGIVLDE--GL-ASTTE-DYRAFYAERCPWWLVI 216 (447)
Q Consensus 174 ~~~~~----~~~~-----------------------------~~~~~~~~~d~--g~-~~p~~-~~~i~~~~~G~~~~~i 216 (447)
+.+.. ++.+ .+++..+.++. |. .+|++ ...++.+.+|..+++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~~~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~~i 220 (423)
T 1z2l_A 141 KNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTV 220 (423)
T ss_dssp HHHTTCCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEEEEEEEEECCSSHHHHTTCCEEEEEEECEEEEEEE
T ss_pred HHHHcCCCHHHHhhhcCcCCcCHHHHHHHcCCccccccccCCCCceEEEEEEeccCchHHHCCCCeEEEeeEecceEEEE
Confidence 88875 2211 01233333321 10 01221 3567788999999999
Q ss_pred EEeecCCccC-CCC-CC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecC-CCCCCCccccccCCce
Q 013216 217 KARGAPGHGA-KLY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAG-TPSPNGFVMNLQPSEA 292 (447)
Q Consensus 217 ~v~G~~~Hs~-~p~-~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g-~~~~~~~~~n~iP~~~ 292 (447)
+++|+++|+| .|+ .+ ||+..+++++..|+.+... . .+.++++++.+++| . +.|+||++|
T Consensus 221 ~v~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~----~-------~~~~~~~vg~i~gg~~------~~NvIP~~a 283 (423)
T 1z2l_A 221 TLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKR----M-------GDPLVLTFGKVEPRPN------TVNVVPGKT 283 (423)
T ss_dssp EEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHH----H-------CTTCEEECCCEEEESC------CTTEECCEE
T ss_pred EEEeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHh----c-------CCCceEEEEEEeecCC------cceeECCEE
Confidence 9999999999 685 67 9999999999999765431 0 11358899999986 4 899999999
Q ss_pred EEEEeeecCCCCCHHHHHHHHHHHhcc--CCCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCCC
Q 013216 293 EAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKL 370 (447)
Q Consensus 293 ~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~ 370 (447)
++.+|+|+.+.++.+++.++|+++++. ..++++++ ++. ...+|++ ..++++++.+.+++++++...
T Consensus 284 ~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~---~~~------~~~~~~~---~~~~~l~~~~~~~~~~~g~~~ 351 (423)
T 1z2l_A 284 TFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGID---IDL------WMDEEPV---PMNKELVATLTELCEREKLNY 351 (423)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEE---EEE------EEEECCE---ECCHHHHHHHHHHHHHTTCCE
T ss_pred EEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEE---EEE------ecCCCCc---cCCHHHHHHHHHHHHHcCCCe
Confidence 999999999999999999999888763 22455555 431 1233332 346899999999999985443
Q ss_pred CCceecCCCcchHHHHHcCCCe-EEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhhc
Q 013216 371 GKPEIFPASTDARYFRERGLPA-IGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASYV 435 (447)
Q Consensus 371 ~~~~~~~g~~D~~~~~~~g~p~-~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~~~ 435 (447)
.+..+.|++|+++|... +|+ +.|||+... ..|++||+++++++.+++++|+.++..++...
T Consensus 352 -~~~~~~ggtD~~~~~~~-~p~~~~~~p~~~~--~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~ 413 (423)
T 1z2l_A 352 -RVMHSGAGHDAQIFAPR-VPTCMIFIPSING--ISHNPAERTNITDLAEGVKTLALMLYQLAWQK 413 (423)
T ss_dssp -EEEEESSCCTHHHHTTT-SCEEEEEECCGGG--CCSSTTCCCCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred -EEecCCCcccHHHHHhh-CCEEEEEeCCCCC--CCCCccccCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 45567799999999887 887 688998653 58999999999999999999999999997654
No 28
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=100.00 E-value=2.5e-37 Score=292.46 Aligned_cols=261 Identities=20% Similarity=0.302 Sum_probs=208.2
Q ss_pred CChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCC
Q 013216 25 KSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS 104 (447)
Q Consensus 25 ~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~ 104 (447)
.+.+++++++++|++|||+| ++|.++++||.++|+++|++++..+.. +++|+++.+ |. +.|+|+|+|||||||.
T Consensus 3 ~~~~~~~~~l~~lv~ips~s--~~e~~~~~~l~~~l~~~G~~~~~~~~~-~~~nv~a~~-g~--~~~~i~l~~H~D~vp~ 76 (268)
T 3t68_A 3 ATDSPVLALAKELISRQSVT--PADAGCQDLMIERLKALGFEIESMVFE-DTTNFWARR-GT--QSPLFVFAGHTDVVPA 76 (268)
T ss_dssp -CCCHHHHHHHHHHTSCCBT--TCCTTHHHHHHHHHHHTTCEECCCEET-TEEC-CEEE-CS--SSCEEEEEEECCBCCC
T ss_pred ccHHHHHHHHHHHhCCCCCC--CCchHHHHHHHHHHHHCCCeEEEEecC-CccEEEEEe-CC--CCCeEEEEccccccCC
Confidence 34688999999999999996 677789999999999999988765533 667999998 54 3589999999999999
Q ss_pred CC-CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccc--c
Q 013216 105 EP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH--V 181 (447)
Q Consensus 105 ~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~--~ 181 (447)
++ +.|+++||++.++ +|++||||++|||++++++|.|++.|.+.+.+++++|+|+|+++||.|+..|++.+++.. .
T Consensus 77 ~~~~~w~~~pf~~~~~-~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~ 155 (268)
T 3t68_A 77 GPLSQWHTPPFEPTVI-DGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMAR 155 (268)
T ss_dssp CCGGGCSSCTTSCEEE-TTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCTTSSSCCHHHHHHHHHHHT
T ss_pred CCcccCCCCCCccEEE-CCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEEEEEeCCccCcccCHHHHHHHHHhc
Confidence 87 7999999999997 999999999999999999999999999887778899999999999998645999988753 2
Q ss_pred ccCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhHHHHHhcccc
Q 013216 182 FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKA 261 (447)
Q Consensus 182 ~~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~ 261 (447)
..+.|++++++.+.....+ ..+..+.+|.
T Consensus 156 ~~~~d~~i~~ept~~~~~~-~~i~~g~~G~-------------------------------------------------- 184 (268)
T 3t68_A 156 NELIDMCIVGEPSSTLAVG-DVVKNGRRGG-------------------------------------------------- 184 (268)
T ss_dssp TCCCCEEEECSCCBSSSTT-SEEEECCGGG--------------------------------------------------
T ss_pred CCCCCEEEEeCCCCCccCC-ceeEEecCCC--------------------------------------------------
Confidence 2346778887532211000 1122233332
Q ss_pred CCCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccC
Q 013216 262 EGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKF 341 (447)
Q Consensus 262 ~~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (447)
. +.
T Consensus 185 -----------------------------------------------------------------p---~~--------- 187 (268)
T 3t68_A 185 -----------------------------------------------------------------G---FL--------- 187 (268)
T ss_dssp -----------------------------------------------------------------G---TS---------
T ss_pred -----------------------------------------------------------------c---cc---------
Confidence 1 11
Q ss_pred CCCcccccCCCChHHHHHHHHHHHh-cCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHH
Q 013216 342 GRPILTATDSSNPWWNLLEEAVRKA-NGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKG 420 (447)
Q Consensus 342 ~~p~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~ 420 (447)
. +++++++.+.+++++. +..+ ......|++|++++++.|+|++.|||+.. ..|+|+|+++++++.++
T Consensus 188 -------~-~~~~l~~~l~~a~~~~~gi~~-~~~~sgggtD~~~~~~~g~p~~~~~~~~~---~~Hs~~E~v~~~d~~~~ 255 (268)
T 3t68_A 188 -------T-DTGELLAAVVAAVEEVNHQAP-ALLTTGGTSDGRFIAQMGAQVVELGPVNA---TIHKVNECVRIADLEKL 255 (268)
T ss_dssp -------C-CCCHHHHHHHHHHHHHHSSCC-EEESSCCCHHHHHHHHHTCEEEECCSBCT---TTTSTTCEEEHHHHHHH
T ss_pred -------C-CchHHHHHHHHHHHHHhCCCc-EEecCccccHHHHHHhcCCCEEEEeeCCC---CCCCccccccHHHHHHH
Confidence 0 1347889999999884 6554 44455689999999999999999999876 47999999999999999
Q ss_pred HHHHHHHHHHHH
Q 013216 421 IDIYESIIKAYA 432 (447)
Q Consensus 421 ~~~~~~~l~~l~ 432 (447)
+++|..++..++
T Consensus 256 ~~vl~~~l~~l~ 267 (268)
T 3t68_A 256 TDMYQKTLNHLL 267 (268)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998875
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=100.00 E-value=3.1e-36 Score=285.02 Aligned_cols=260 Identities=19% Similarity=0.300 Sum_probs=203.0
Q ss_pred hhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCCC
Q 013216 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP 106 (447)
Q Consensus 27 ~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~ 106 (447)
.+++++++++|++|||+| ++|.++++||.++|+++|++++..+. ++++|+++.+ |. +.|+|+|+|||||||.++
T Consensus 5 ~~~~~~~l~~lv~ips~s--~~e~~~~~~l~~~l~~~G~~~~~~~~-~~~~nv~a~~-g~--~~~~i~l~~H~D~vp~~~ 78 (269)
T 4h2k_A 5 KEKVVSLAQDLIRRPSIS--PNDEGCQQIIAERLEKLGFQIEWMPF-NDTLNLWAKH-GT--SEPVIAFAGHTDVVPTGD 78 (269)
T ss_dssp HHHHHHHHHHHHTSCCBT--TCCTTHHHHHHHHHHTTTCEEEECCB-TTBCEEEEEE-CS--SSCEEEEEEECCBCCCCC
T ss_pred HHHHHHHHHHHhCCCCCC--CCcHHHHHHHHHHHHHcCCeEEEEEc-CCceEEEEEe-CC--CCCEEEEEeeecccCCCC
Confidence 368899999999999996 67788999999999999999886553 3678999998 54 358999999999999987
Q ss_pred -CCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHcccc--cc
Q 013216 107 -SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHV--FN 183 (447)
Q Consensus 107 -~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~--~~ 183 (447)
+.|+++||.+.++ +|++||||++|||++++++|.|++.|.+.+.+++++|+|+|+++||.|+..|++.+++... ..
T Consensus 79 ~~~w~~~pf~~~~~-~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~~~ 157 (269)
T 4h2k_A 79 ENQWSSPPFSAEII-DGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDE 157 (269)
T ss_dssp GGGCSSCTTSCCEE-TTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTC
T ss_pred cccccCCCCCeEEE-CCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCcccCHHHHHHHHHhcCC
Confidence 7999999999997 9999999999999999999999999998877788999999999999986459999887422 23
Q ss_pred CCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhHHHHHhccccCC
Q 013216 184 SLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEG 263 (447)
Q Consensus 184 ~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 263 (447)
+.|++++.+.......+ ..+..+.+|.
T Consensus 158 ~~d~~i~~Ept~~~~~~-~~i~~g~~G~---------------------------------------------------- 184 (269)
T 4h2k_A 158 KITYCMVGEPSSAKNLG-DVVKNGRRGG---------------------------------------------------- 184 (269)
T ss_dssp CCCEEEECCCCBSSSTT-SEEECSCTTC----------------------------------------------------
T ss_pred CCCEEEEECCCCCCcCC-ceeEEecccc----------------------------------------------------
Confidence 45777776432110000 0111111111
Q ss_pred CcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCC
Q 013216 264 EVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGR 343 (447)
Q Consensus 264 ~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (447)
+ - +.
T Consensus 185 -----------------------------------------------------------G---~---~~----------- 188 (269)
T 4h2k_A 185 -----------------------------------------------------------G---F---LT----------- 188 (269)
T ss_dssp -----------------------------------------------------------C--------------------
T ss_pred -----------------------------------------------------------c---c---cC-----------
Confidence 0 1 10
Q ss_pred CcccccCCCChHHHHHHHHHHH-hcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHH
Q 013216 344 PILTATDSSNPWWNLLEEAVRK-ANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGID 422 (447)
Q Consensus 344 p~~~~~~~~~~~~~~~~~a~~~-~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~ 422 (447)
.++++++.+.+++++ .+... .....+|+||+++++..|+|++.|||+.. ..|+++|+++++++.++++
T Consensus 189 -------~~~~l~~~l~~aa~~~~gi~~-~~~~~gggtDa~~~~~~g~p~~~~~~~~~---~~Hs~~E~v~~~d~~~~~~ 257 (269)
T 4h2k_A 189 -------KPGKLLDSITSAIEETIGITP-KAETGGGTSDGRFIALMGAEVVEFGPLNS---TIHKVNECVSVEDLGKCGE 257 (269)
T ss_dssp ----------HHHHHHHHHHHHHHSCCC-EEECC--CHHHHHHHTTTCEEEECCSBCT---TTTSTTCEEEHHHHHHHHH
T ss_pred -------CCcHHHHHHHHHHHHHhCCCC-EEecCCCCchHHHHHhhCCCEEEEEeCCC---CCcCCcccccHHHHHHHHH
Confidence 024688888888887 56554 44455689999999999999999999875 4799999999999999999
Q ss_pred HHHHHHHHHHh
Q 013216 423 IYESIIKAYAS 433 (447)
Q Consensus 423 ~~~~~l~~l~~ 433 (447)
+|..++..+++
T Consensus 258 ll~~~l~~l~~ 268 (269)
T 4h2k_A 258 IYHKMLVNLLD 268 (269)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHhh
Confidence 99999988753
No 30
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=100.00 E-value=1.6e-35 Score=267.10 Aligned_cols=192 Identities=49% Similarity=0.907 Sum_probs=165.4
Q ss_pred CCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCC
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVP 103 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp 103 (447)
..+.++++++|++|++|||+|++++|.+++++|.++|+++|++++..+...+++|++++++|.+++.|+|+|+|||||||
T Consensus 6 ~~~~~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp 85 (198)
T 1q7l_A 6 PEEEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVP 85 (198)
T ss_dssp -CCCCHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCC
T ss_pred chhHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccC
Confidence 34678899999999999999855578999999999999999998876544467899999988655458999999999999
Q ss_pred CCCCCCCcCCCceee-CCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccc
Q 013216 104 SEPSKWSHHPFGAHL-DSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVF 182 (447)
Q Consensus 104 ~~~~~W~~~Pf~~~~-~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~ 182 (447)
++++.|+++||.+.+ + +|++||||++|||++++++|.|++.|.+.+.+++++|+|+|+++||.|+..|++.++++..+
T Consensus 86 ~~~~~w~~~pf~~~~~~-~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~ 164 (198)
T 1q7l_A 86 VFKEHWSHDPFEAFKDS-EGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEF 164 (198)
T ss_dssp CCGGGCSSCTTTCCBCT-TSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGGGTSTTTHHHHTTSHHH
T ss_pred CCcccCccCCCeeeEcc-CCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcccccCccccHHHHHHhHHh
Confidence 987789999999997 6 89999999999999999999999999999888899999999999999855799999987554
Q ss_pred cCCceEEEEecCCcCcCCcceeEeeeeeeEEEEE
Q 013216 183 NSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVI 216 (447)
Q Consensus 183 ~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i 216 (447)
...+..+++|.|..+|+....++.++||..+++|
T Consensus 165 ~~~~~~~~id~g~~ept~~~~v~~~~kG~~~~~v 198 (198)
T 1q7l_A 165 HALRAGFALDEGIANPTDAFTVFYSERSPWWVRV 198 (198)
T ss_dssp HTTCEEEEEECCCCCSSSSEEEEECCSSCGGGCC
T ss_pred ccCCcCEEEecCccCCCCCceEEEEccEEEEEEC
Confidence 3345567788887789876689999999887653
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.95 E-value=1.5e-27 Score=233.10 Aligned_cols=255 Identities=15% Similarity=0.168 Sum_probs=172.7
Q ss_pred HHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCC-------
Q 013216 33 RFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE------- 105 (447)
Q Consensus 33 ~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~------- 105 (447)
+|++|+++||+| ++|.+++++|.++|+++|++++. + ...|+++.++|.+ +.|+|+|.||||+||.-
T Consensus 3 ~l~~L~~~~s~s--g~e~~~~~~l~~~l~~~g~~~~~-d---~~gnlia~~~g~~-~~~~v~l~aH~D~v~~~v~~i~~~ 75 (340)
T 2fvg_A 3 YLKELSMMPGVS--GDEGKVRDFIKSKIEGLVDNLYT-D---VLGNLIALKRGRD-SSKKLLVSAHMDEVGFVVSKIEKD 75 (340)
T ss_dssp CHHHHHHSCCBT--TCCHHHHHHHHHHHGGGSSEEEE-C---TTSCEEEEECCSE-EEEEEEEEEECCBCEEEEEEECTT
T ss_pred HHHHHHcCCCCC--CchHHHHHHHHHHHHhhCCEEEE-e---CCCcEEEEecCCC-CCceEEEEeccCcCcEEEEEECCC
Confidence 588999999985 78889999999999999998764 2 3449999987643 24789999999999930
Q ss_pred -------CCCCCcCCCcee-----------------------------------------------eCCC----------
Q 013216 106 -------PSKWSHHPFGAH-----------------------------------------------LDSQ---------- 121 (447)
Q Consensus 106 -------~~~W~~~Pf~~~-----------------------------------------------~~~~---------- 121 (447)
..+|..+||.+. ++.+
T Consensus 76 G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~ 155 (340)
T 2fvg_A 76 GKVSFLPVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYI 155 (340)
T ss_dssp SCEEEEEESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCE
T ss_pred CEEEEEeeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCce
Confidence 137999998773 2115
Q ss_pred ---CcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCceEEEEecCCcCc
Q 013216 122 ---GNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLAST 198 (447)
Q Consensus 122 ---g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~p 198 (447)
+++||| ++|||++++++|.|++.|. +++++|+|+|+++||.|+ .|++.+++. + ..++++++|.+..
T Consensus 156 ~~~~~i~gr-a~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~-~G~~~~~~~--~-~~~~~i~~d~~~~-- 224 (340)
T 2fvg_A 156 EKNGRAVGK-AFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGL-RGSAVVVEQ--L-KPTCAIVVETTTA-- 224 (340)
T ss_dssp EETTEEEES-CHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC------CHHHHHH--H-CCSEEEEEEEEEE--
T ss_pred eecCEEeec-cCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccch-hhhHHHhhc--c-CCCEEEEEecccC--
Confidence 999999 9999999999999999876 367999999999999986 799988763 2 2477888763210
Q ss_pred CCcceeEeeeeeeEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCC
Q 013216 199 TEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGT 277 (447)
Q Consensus 199 ~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~ 277 (447)
. ++.|+++|++.|+.| |++.. .. ..+.
T Consensus 225 ----~-------------~~~G~~~h~~~~~~G~g~~i~---------------------------------~~--~~~~ 252 (340)
T 2fvg_A 225 ----G-------------DNPELEERKWATHLGDGPAIT---------------------------------FY--HRGY 252 (340)
T ss_dssp ----C-------------SCSTTCCSSSSCCTTSCCEEC---------------------------------SC--CSSS
T ss_pred ----C-------------CCCCCccccCCcccCCCcEEE---------------------------------Ee--CCCC
Confidence 1 467888898777766 53200 00 0000
Q ss_pred CCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCcccccCCCChHHH
Q 013216 278 PSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWN 357 (447)
Q Consensus 278 ~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 357 (447)
.. ...+.+.+++++
T Consensus 253 ------~~--------------------~~~l~~~l~~~a---------------------------------------- 266 (340)
T 2fvg_A 253 ------VI--------------------PKEIFQTIVDTA---------------------------------------- 266 (340)
T ss_dssp ------CC--------------------CHHHHHHHHHHH----------------------------------------
T ss_pred ------CC--------------------CHHHHHHHHHHH----------------------------------------
Confidence 00 011333333332
Q ss_pred HHHHHHHHhcCCCCCc-eecCCCcchHHHHH--cCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHh
Q 013216 358 LLEEAVRKANGKLGKP-EIFPASTDARYFRE--RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 358 ~~~~a~~~~~~~~~~~-~~~~g~~D~~~~~~--~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
++.+... .. ....++||+++|.. .|+|++.|||+.. ..|+++|+++++++.+++++|..++..++.
T Consensus 267 ------~~~gi~~-~~~~~~~ggtDa~~~~~~~~GiP~v~~g~~~~---~~Hs~~E~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 267 ------KNNDIPF-QMKRRTAGGTDAGRYARTAYGVPAGVISTPAR---YIHSPNSIIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp ------HHTTCCC-EECCCC-------------CCSCEEEEEEEEE---ESSTTCEEEEHHHHHHHHHHHHHHHHHCHH
T ss_pred ------HHcCCCe-EEEecCCCCccHHHHHhhCCCCcEEEeccccc---ccCChhhcccHHHHHHHHHHHHHHHHhccc
Confidence 2222221 11 13458899998876 7999999999865 399999999999999999999999998764
No 32
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.93 E-value=1.1e-24 Score=212.16 Aligned_cols=247 Identities=17% Similarity=0.187 Sum_probs=184.2
Q ss_pred HHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCC-----
Q 013216 29 SIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVP----- 103 (447)
Q Consensus 29 ~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp----- 103 (447)
+++++|++|+++||+| ++|.+++++|.++|+++|+ ++. + +..|+++.++| + .|+|+|.||||+|+
T Consensus 3 ~~~~~l~~l~~~~s~s--g~e~~~~~~l~~~l~~~g~-~~~-d---~~gnlia~~~~-~--~~~i~l~aH~D~v~~~v~~ 72 (332)
T 2wyr_A 3 SMIEKLKKFTQIPGIS--GYEERIREEIIREIKDFAD-YKV-D---AIGNLIVELGE-G--EERILFMAHMDEIGLLITG 72 (332)
T ss_dssp CHHHHHHHHHTSCCBT--TCCHHHHHHHHHHHTTTCC-CEE-C---TTCCEEEEEES-S--SEEEEEEEECCBCEEEEEE
T ss_pred cHHHHHHHHHcCCCCC--CcHHHHHHHHHHHHhhcCc-EEE-c---CCCeEEEEecC-C--CceEEEEeccCcccEEEEE
Confidence 3678999999999985 7888999999999999999 553 2 56699999876 2 48899999999995
Q ss_pred -----------CCCCCCCc-------------------------------------------------------------
Q 013216 104 -----------SEPSKWSH------------------------------------------------------------- 111 (447)
Q Consensus 104 -----------~~~~~W~~------------------------------------------------------------- 111 (447)
.++ |..
T Consensus 73 i~~~G~l~~~~~Gg--~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~G 150 (332)
T 2wyr_A 73 ITDEGKLRFRKVGG--IDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPL 150 (332)
T ss_dssp ECTTSCEEEEEESC--CCGGGTTTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTT
T ss_pred ECCCCeEEEEecCC--cChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCC
Confidence 442 321
Q ss_pred ------CCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCC
Q 013216 112 ------HPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSL 185 (447)
Q Consensus 112 ------~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~ 185 (447)
+||.. .. ++++||| ++|||++++++|.|++.|.+.+ ++++|.|+|+++||.|+ .|++.++.. + ..
T Consensus 151 d~~~~~~~~~~-~~-~~~i~gr-a~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~-~G~~~~~~~--~-~~ 221 (332)
T 2wyr_A 151 DFAVFKKHFSV-LN-GKYVSTR-GLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGL-KGAKFLANH--Y-YP 221 (332)
T ss_dssp CEEEECCCCEE-ET-TTEEECT-THHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTS-HHHHHHTTT--C-CC
T ss_pred CEEEEccccEE-ec-CCeEEcc-cCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCc-chHHHHhcc--c-CC
Confidence 23443 35 8999999 9999999999999999988765 56899999999999986 699988642 2 35
Q ss_pred ceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhHHHHHhccccCCCc
Q 013216 186 NVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGEV 265 (447)
Q Consensus 186 ~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 265 (447)
++++++|.+.. . ..+| + ... .+
T Consensus 222 ~~~i~~d~~~~------~---~~p~--------------------~--------------~~~-------------lg-- 243 (332)
T 2wyr_A 222 QYAFAIDSFAC------C---SPLT--------------------G--------------DVK-------------LG-- 243 (332)
T ss_dssp SEEEEECCEEC------C---SGGG--------------------T--------------TCC-------------TT--
T ss_pred CEEEEEecccc------c---CCCC--------------------C--------------cee-------------eC--
Confidence 77888864211 0 0000 0 000 00
Q ss_pred ceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCc
Q 013216 266 VSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPI 345 (447)
Q Consensus 266 ~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 345 (447)
.|. . +. +. ..
T Consensus 244 ---------~G~------~-----------------------------------------i~---~~-------d~---- 253 (332)
T 2wyr_A 244 ---------KGP------V-----------------------------------------IR---AV-------DN---- 253 (332)
T ss_dssp ---------SCC------E-----------------------------------------EE---EE-------CS----
T ss_pred ---------CCC------E-----------------------------------------EE---Ec-------CC----
Confidence 010 0 11 10 00
Q ss_pred ccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHH
Q 013216 346 LTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYE 425 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~ 425 (447)
....+.++++.+.+++++.+... .....+++||+++|.. |+|++.|||+.. ..|+++|+++++++.++++++.
T Consensus 254 --~~~~~~~l~~~l~~~~~~~gi~~-~~~~~~ggtDa~~~~~-GiPtv~lg~~~~---~~Hs~~E~v~~~dl~~~~~ll~ 326 (332)
T 2wyr_A 254 --SAIYSRDLARKVWSIAEKNGIEI-QIGVTGGGTDASAFQD-RSKTLALSVPIK---YLHSEVETLHLNDLEKLVKLIE 326 (332)
T ss_dssp --SCBCCHHHHHHHHHHHHHTTCCC-EEEECSSCCGGGGGTT-TSEEEEEECEEB---SCSSTTCEEEHHHHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHHHHcCCCe-EEecCCCCchHHHHHc-CCCEEEEcCCcC---CCCChhhcccHHHHHHHHHHHH
Confidence 12335789999999999987654 4555668999999988 999999999855 5999999999999999999999
Q ss_pred HHHHHH
Q 013216 426 SIIKAY 431 (447)
Q Consensus 426 ~~l~~l 431 (447)
.++..+
T Consensus 327 ~~~~~l 332 (332)
T 2wyr_A 327 ALAFEL 332 (332)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 988653
No 33
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.92 E-value=6.9e-24 Score=209.65 Aligned_cols=262 Identities=18% Similarity=0.228 Sum_probs=189.3
Q ss_pred hhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCC--
Q 013216 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS-- 104 (447)
Q Consensus 27 ~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~-- 104 (447)
.++++++|++|+++||+| ++|.+++++|.++|+++|++++. + ...|+++.++|.. +.|+|+|.||||+|+.
T Consensus 6 ~~~~~~~l~~L~~~~s~s--g~e~~~~~~l~~~l~~~g~~~~~-d---~~gnlia~~~g~~-~~~~vll~aH~D~v~~~v 78 (373)
T 1vhe_A 6 LDETLTMLKDLTDAKGIP--GNEREVRQVMKSYIEPFADEVTT-D---RLGSLIAKKTGAE-NGPKIMIAGHLDEVGFMV 78 (373)
T ss_dssp CCHHHHHHHHHHHSCCCT--TCCHHHHHHHHHHHGGGCSEEEE-C---TTCCEEEEEESST-TSCEEEEEEECCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCCC--CchHHHHHHHHHHHHhhCCEEEE-c---CCCcEEEEecCCC-CCceEEEEecCCcCCEEE
Confidence 457999999999999985 78889999999999999998763 2 3459999988753 3489999999999992
Q ss_pred --------------C----------------CC-------CCCcCC----------------------------------
Q 013216 105 --------------E----------------PS-------KWSHHP---------------------------------- 113 (447)
Q Consensus 105 --------------~----------------~~-------~W~~~P---------------------------------- 113 (447)
+ .+ .|. +|
T Consensus 79 ~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~-~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi 157 (373)
T 1vhe_A 79 TQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSK-PPHILSPEARKKSVEIKDMFIDIGASSREEALEWGV 157 (373)
T ss_dssp EEECTTSCEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECC-CGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTC
T ss_pred EEECCCCeEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCC-CcccCchhhccCCCChhHeEEEecCCCHHHHHHcCC
Confidence 1 01 143 22
Q ss_pred -----------CceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccc
Q 013216 114 -----------FGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVF 182 (447)
Q Consensus 114 -----------f~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~ 182 (447)
|....+ ++++||| ++|||++++++|.|++.|.+.+ ++++|+|+|+++||.|+ .|++.+... +
T Consensus 158 ~~Gd~v~~~~~~~~~~~-~~~i~gr-~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~G~-~G~~~~~~~--~ 230 (373)
T 1vhe_A 158 LPGDMIVPHFEFTVMNN-EKFLLAK-AWDNRIGCAIAIDVLRNLQNTD--HPNIVYGVGTVQEEVGL-RGAKTAAHT--I 230 (373)
T ss_dssp CTTCEEEECCCCEECSS-TTEEEET-THHHHHHHHHHHHHHHHHHTSC--CSSEEEEEEESCCTTTS-HHHHHHHHH--H
T ss_pred CCCCEEEEccccEEecC-CCeEEec-cCccHHHHHHHHHHHHHHhhcC--CCceEEEEEECCcccCh-hhHHHHhcc--c
Confidence 111222 6899999 6999999999999999998764 56899999999999986 699887542 2
Q ss_pred cCCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhHHHHHhccccC
Q 013216 183 NSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAE 262 (447)
Q Consensus 183 ~~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 262 (447)
..|+++++|.+.. .. .+|. .|+.+
T Consensus 231 -~~d~~i~~d~~~~---~~------~~g~---------------~~~~~------------------------------- 254 (373)
T 1vhe_A 231 -QPDIAFGVDVGIA---GD------TPGI---------------SEKEA------------------------------- 254 (373)
T ss_dssp -CCSEEEEEEEEEC---CC------STTC---------------CTTTC-------------------------------
T ss_pred -CCCEEEEEecccc---CC------CCCC---------------ccccc-------------------------------
Confidence 2477888874321 00 0111 01100
Q ss_pred CCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCC
Q 013216 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFG 342 (447)
Q Consensus 263 ~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (447)
. ++-|. . | .+. +. .
T Consensus 255 ----~-----~~lg~------G----~-----------------------------------~i~---~~-------~-- 268 (373)
T 1vhe_A 255 ----Q-----SKMGK------G----P-----------------------------------QII---VY-------D-- 268 (373)
T ss_dssp ----C-----CCTTS------C----C-----------------------------------EEE---EE-------E--
T ss_pred ----c-----cccCC------C----c-----------------------------------eEE---Ee-------C--
Confidence 0 00010 0 0 011 11 0
Q ss_pred CCcccccCCCChHHHHHHHHHHHhcCCCCCc-eecCCCcchHHH--HHcCCCeEEEccCCCCCCCCCCCCccccHHHHHH
Q 013216 343 RPILTATDSSNPWWNLLEEAVRKANGKLGKP-EIFPASTDARYF--RERGLPAIGFSPMANTPILLHDHNEFLNQAEYLK 419 (447)
Q Consensus 343 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~~~~g~~D~~~~--~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~ 419 (447)
+ ....+.++++.+++++++.+... .. ....|+||++++ ...|+|++.|||+.. ..|+++|+++++++..
T Consensus 269 -~---~~~~~~~l~~~l~~~a~~~gi~~-~~~~~~~ggtDa~~~~~~~~GiPtv~lg~~~~---~~Hs~~E~v~~~dl~~ 340 (373)
T 1vhe_A 269 -A---SMVSHKGLRDAVVATAEEAGIPY-QFDAIAGGGTDSGAIHLTANGVPALSITIATR---YIHTHAAMLHRDDYEN 340 (373)
T ss_dssp -T---TEECCHHHHHHHHHHHHHHTCCC-EEEEETTCCCTHHHHTTSTTCCCEEEEEEEEB---STTSSCEEEEHHHHHH
T ss_pred -C---CCCCCHHHHHHHHHHHHHcCCCe-EEecCCCCCccHHHHHHhCCCCcEEEEccccc---cCCChhheecHHHHHH
Confidence 0 12345789999999999987655 44 445689999999 567999999998865 4899999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 013216 420 GIDIYESIIKAYAS 433 (447)
Q Consensus 420 ~~~~~~~~l~~l~~ 433 (447)
++++|..++..++.
T Consensus 341 ~~~ll~~~l~~l~~ 354 (373)
T 1vhe_A 341 AVKLITEVIKKLDR 354 (373)
T ss_dssp HHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHhcH
Confidence 99999999988754
No 34
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.91 E-value=6.2e-27 Score=227.60 Aligned_cols=335 Identities=12% Similarity=0.111 Sum_probs=191.2
Q ss_pred HHHHHhhhcccCCCCCCChh-HHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCCCCCC
Q 013216 31 IERFRAYLQIDTSQPNPDYT-NASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKW 109 (447)
Q Consensus 31 ~~~l~~l~~ips~s~~~~e~-~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~~~W 109 (447)
+++|++|++|||+| ++|+ +++++|.++|+++|++++. + ...||+++++|. .|+|+|.|||||||....
T Consensus 12 ~elL~~Lv~ipS~s--g~E~~~v~~~l~~~l~~~G~~v~~-D---~~GNlia~~~g~---~p~lll~~H~Dtvp~~v~-- 80 (354)
T 2wzn_A 12 WKLMQEIIEAPGVS--GYEHLGIRDIVVDVLKEVADEVKV-D---KLGNVIAHFKGS---SPRIMVAAHMDKIGVMVN-- 80 (354)
T ss_dssp HHHHHHHHHSCCBT--TCGGGTHHHHHHHHHHTTSSEEEE-C---TTCCEEEEECCS---SSEEEEEEECCBCEEEEE--
T ss_pred HHHHHHHhcCCCCC--cchHHHHHHHHHHHHHHcCCEEEE-e---CCCeEEEEECCC---CceEEEEeccccCCCcCC--
Confidence 58999999999985 6664 6899999999999998874 3 334999999753 489999999999997632
Q ss_pred CcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCceEE
Q 013216 110 SHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGI 189 (447)
Q Consensus 110 ~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~ 189 (447)
... ++|++++++..++++..+++. ++..+.+.+ .+...+.++++.+||.+. .|.+.+....... +.+.
T Consensus 81 ------~~~-~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~ee~~~-~~~~~~~~~~~~~--~~g~ 148 (354)
T 2wzn_A 81 ------HID-KDGYLHIVPIGGVLPETLVAQ-RIRFFTEKG-ERYGVVGVLPPHLRRGQE-DKGSKIDWDQIVV--DVGA 148 (354)
T ss_dssp ------EEC-TTSCEEEEEESSCCGGGGTTC-EEEEEETTE-EEEEEECCCCGGGC----------CCGGGCCE--ECSC
T ss_pred ------eee-cCCceeeccCCCccHHHHHHH-HHHHhhccC-CccceEEEeeeeeEeccc-ccccchhhhhhhh--hhcc
Confidence 223 388899888877766554332 222222333 345778888899999775 4665544332221 1111
Q ss_pred EEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceee
Q 013216 190 VLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVN 269 (447)
Q Consensus 190 ~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~ 269 (447)
... .+.....+..+.++.....+++.+..+|++.+. ++...+..++..+..+.... .......
T Consensus 149 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~-----------~~~~~~~ 211 (354)
T 2wzn_A 149 SSK----EEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYL--DDRICLYAMIEAARQLGDHE-----------ADIYIVG 211 (354)
T ss_dssp SSH----HHHHHTTCCTTCEEEECCCCEECSSSEEECTTH--HHHHHHHHHHHHHHHCCCCS-----------SEEEEEE
T ss_pred cch----hhhhccccccceeeeeeeeeEeecccccccccc--cccchhhhHHHHHHHHHhcc-----------ccccccc
Confidence 111 111123455566777777788888888876544 55555555555554433211 0000000
Q ss_pred eeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCccccc
Q 013216 270 MAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPILTAT 349 (447)
Q Consensus 270 ~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 349 (447)
......|. ..++...|.++..+....+.+........ .............. .. .
T Consensus 212 ~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-------------~~------~ 265 (354)
T 2wzn_A 212 SVQEEVGL-RGARVASYAINPEVGIAMDVTFAKQPHDK------GKIVPELGKGPVMD-------------VG------P 265 (354)
T ss_dssp ESCGGGTS-HHHHHHHHHHCCSEEEEEEEEECCCTTST------TCCCCCTTSCCEEE-------------ES------T
T ss_pred cceeeeee-ecccccccccccccceeeeeeeccccchh------hhhheeeccccccc-------------cc------c
Confidence 11111111 11122566667777777777655432210 00000000011111 00 0
Q ss_pred CCCChHHHHHHHHHHHhcCCC-CCceecCCCcchHHHH--HcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHH
Q 013216 350 DSSNPWWNLLEEAVRKANGKL-GKPEIFPASTDARYFR--ERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYES 426 (447)
Q Consensus 350 ~~~~~~~~~~~~a~~~~~~~~-~~~~~~~g~~D~~~~~--~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~ 426 (447)
..................... +.....+|+||++++. ..|+|++.|||+.. .+|++||+++++++.+++++|..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ggTDa~~~~~~~~Giptv~~G~g~~---~~Ht~~E~v~i~dl~~~~~ll~~ 342 (354)
T 2wzn_A 266 NINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINKEGVATAVLSIPIR---YMHSQVELADARDVDNTIKLAKA 342 (354)
T ss_dssp TSCHHHHHHHHHHHHHTTCCCEEEECCSCCSSHHHHHHTSTTCCEEEEEEEEEB---STTSTTCEEEHHHHHHHHHHHHH
T ss_pred ccCcchhhhhHHHHHHhcCCCceEEEecccccHHHHHHHhcCCCCEEEECcccC---CCCcccEEEEHHHHHHHHHHHHH
Confidence 111122222222222222211 1334456899999875 56999999999865 48999999999999999999999
Q ss_pred HHHHHHhh
Q 013216 427 IIKAYASY 434 (447)
Q Consensus 427 ~l~~l~~~ 434 (447)
++.+|.+.
T Consensus 343 ~i~~L~~~ 350 (354)
T 2wzn_A 343 LLEELKPM 350 (354)
T ss_dssp HHHHCCCC
T ss_pred HHHhCccc
Confidence 99998654
No 35
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.90 E-value=2.1e-23 Score=204.47 Aligned_cols=152 Identities=20% Similarity=0.244 Sum_probs=118.1
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccC---
Q 013216 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVV--- 102 (447)
Q Consensus 26 ~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtv--- 102 (447)
+.++++++|++|++|||+| ++|.++++++.++|+++|++++.. ...||++.++|.+ +.|+|+|.||||||
T Consensus 4 ~~~~~~~~l~~lv~i~s~s--~~e~~~~~~l~~~l~~~g~~~~~d----~~gnl~a~~~g~~-~~~~ill~~H~Dtv~~~ 76 (349)
T 2gre_A 4 HTKETMELIKELVSIPSPS--GNTAKIINFIENYVSEWNVETKRN----NKGALILTVKGKN-DAQHRLLTAHVDTLGAM 76 (349)
T ss_dssp HHHHHHHHHHHHHTSCCBT--TCCHHHHHHHHHHTTTSSSEEEEC----SSSCEEEEECCSE-EEEEEEEEEECCBCEEE
T ss_pred cHHHHHHHHHHHHhCCCCC--ccHHHHHHHHHHHHHHhCCEEEEe----cCCcEEEEecCCC-CCceEEEEeccccccee
Confidence 4678999999999999985 678899999999999999987643 3458999997653 24789999999999
Q ss_pred -------------CCCCCCCCcCCCcee----------------------------------------------------
Q 013216 103 -------------PSEPSKWSHHPFGAH---------------------------------------------------- 117 (447)
Q Consensus 103 -------------p~~~~~W~~~Pf~~~---------------------------------------------------- 117 (447)
|.+ +|..+||.+.
T Consensus 77 v~~i~~~G~l~~~~~G--g~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~ 154 (349)
T 2gre_A 77 VKEIKPDGRLSLSMIG--GFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADE 154 (349)
T ss_dssp EEEECTTSCEEEEEES--SCCGGGTTTCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHH
T ss_pred EEEECCCCeEEEEecC--CCccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHH
Confidence 433 4665554211
Q ss_pred --------------------eCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHH
Q 013216 118 --------------------LDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFA 177 (447)
Q Consensus 118 --------------------~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~ 177 (447)
.. ++++||| +.|||++++++|.|++.|.+.+.+++++|+|+|+++||.|+ .|++.+
T Consensus 155 ~~~~gi~~gd~v~~~~~~~~~~-~~~i~gr-~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~G~-~g~~~~- 230 (349)
T 2gre_A 155 VRELGIEVGDFVSFDPRVQITE-SGYIKSR-HLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGY-GGNSNI- 230 (349)
T ss_dssp HHHTTCCTTCEEEECCCCEECT-TSEEEES-CCTTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC-----CCCCCC-
T ss_pred HHHcCCCCCCEEEEccccEEcc-CCeEEEe-eccchHHHHHHHHHHHHHHhccCCCCceEEEEEECcccCCc-hhhccc-
Confidence 12 5899999 69999999999999999998887788999999999999986 687764
Q ss_pred ccccccCCceEEEEecC
Q 013216 178 DSHVFNSLNVGIVLDEG 194 (447)
Q Consensus 178 ~~~~~~~~~~~~~~d~g 194 (447)
.. ..++++++|.+
T Consensus 231 ---~~-~~~~~i~~D~~ 243 (349)
T 2gre_A 231 ---PE-ETVEYLAVDMG 243 (349)
T ss_dssp ---CT-TEEEEEEECCC
T ss_pred ---cc-CCCEEEEEecc
Confidence 12 24677777743
No 36
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.89 E-value=7.9e-23 Score=200.65 Aligned_cols=253 Identities=16% Similarity=0.187 Sum_probs=180.5
Q ss_pred HHHHHHhhhcccCCCCCCCh-hHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCC-----
Q 013216 30 IIERFRAYLQIDTSQPNPDY-TNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVP----- 103 (447)
Q Consensus 30 ~~~~l~~l~~ips~s~~~~e-~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp----- 103 (447)
++++|++|+++||+| ++| .+++++|.++|+++|++++. + ...|+++.++|. .|+|+|.||||+|+
T Consensus 8 ~~~~l~~L~~~~s~s--g~e~~~~~~~l~~~l~~~g~~~~~-d---~~gnlia~~~g~---~~~i~l~aH~D~v~~~v~~ 78 (353)
T 1y0y_A 8 DYELLKKVVEAPGVS--GYEFLGIRDVVIEEIKDYVDEVKV-D---KLGNVIAHKKGE---GPKVMIAAHMDQIGLMVTH 78 (353)
T ss_dssp CHHHHHHHHHSCCBT--TCGGGTHHHHHHHHHGGGSSEEEE-C---TTCCEEEEECCS---SCEEEEEEECCBCEEEEEE
T ss_pred HHHHHHHHHhCCCCC--ccchHHHHHHHHHHHHhhCCeEEE-c---CCCCEEEEecCC---CccEEEEeccCcccEEEEE
Confidence 678999999999985 788 89999999999999998764 2 455999998764 38999999999995
Q ss_pred -----------CCCCCCCc-------------------------CCCc--------------------------------
Q 013216 104 -----------SEPSKWSH-------------------------HPFG-------------------------------- 115 (447)
Q Consensus 104 -----------~~~~~W~~-------------------------~Pf~-------------------------------- 115 (447)
.++ |.. +|+-
T Consensus 79 i~~~G~l~~~~~Gg--~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi 156 (353)
T 1y0y_A 79 IEKNGFLRVAPIGG--VDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGV 156 (353)
T ss_dssp ECTTSCEEEEEESS--CCGGGTTTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTC
T ss_pred ECCCceEEEEEeCC--cchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCC
Confidence 332 321 1100
Q ss_pred ------------eeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHcccccc
Q 013216 116 ------------AHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFN 183 (447)
Q Consensus 116 ------------~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~ 183 (447)
.... ++++||| ++|||++++++|.+++.|.+ ++++|.|+|+++||.|+ .|++.+... +
T Consensus 157 ~~Gd~v~~~~~~~~~~-~~~i~gr-a~D~k~g~a~~l~a~~~l~~----~~~~i~~~~~~~EE~g~-~G~~~~~~~--~- 226 (353)
T 1y0y_A 157 KIGTVITWDGRLERLG-KHRFVSI-AFDDRIAVYTILEVAKQLKD----AKADVYFVATVQEEVGL-RGARTSAFG--I- 226 (353)
T ss_dssp CTTCEEEECCCCEEET-TTEEEET-THHHHHHHHHHHHHHHHCCS----CSSEEEEEEESCCTTTS-HHHHHHHHH--H-
T ss_pred CCCCEEEeccCcEEec-CCeEEec-cCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccch-hHHHHHhhc--c-
Confidence 0112 5789999 89999999999999998754 67899999999999986 699888642 2
Q ss_pred CCceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCC-CCCCHHHHHHHHHHHHHhchhhhHHHHHhccccC
Q 013216 184 SLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKL-YDNSAMENLFKSIESVRRFRASQFDLVKAGLKAE 262 (447)
Q Consensus 184 ~~~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p-~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 262 (447)
..++++++|.+.. . .|-+.. +.+
T Consensus 227 ~~~~~i~~d~~~~---~----------------------~~p~~~~~~g------------------------------- 250 (353)
T 1y0y_A 227 EPDYGFAIDVTIA---A----------------------DIPGTPEHKQ------------------------------- 250 (353)
T ss_dssp CCSEEEEEEEEEC---C----------------------CSTTCCGGGC-------------------------------
T ss_pred CCCEEEEEecccc---c----------------------CCCCCccccC-------------------------------
Confidence 2467888764211 0 011100 000
Q ss_pred CCcceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCC
Q 013216 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFG 342 (447)
Q Consensus 263 ~~~~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (447)
.+. +.+|. . +. +. ..
T Consensus 251 ----~~~---lg~G~------~-----------------------------------------i~---~~-------d~- 265 (353)
T 1y0y_A 251 ----VTH---LGKGT------A-----------------------------------------IK---IM-------DR- 265 (353)
T ss_dssp ----CCC---TTSCE------E-----------------------------------------EE---EE-------ET-
T ss_pred ----ccc---cCCCc------E-----------------------------------------EE---Ee-------CC-
Confidence 000 00110 0 11 10 00
Q ss_pred CCcccccCCCChHHHHHHHHHHHhcCCCCCc-eecCCCcchHHH--HHcCCCeEEEccCCCCCCCCCCCCccccHHHHHH
Q 013216 343 RPILTATDSSNPWWNLLEEAVRKANGKLGKP-EIFPASTDARYF--RERGLPAIGFSPMANTPILLHDHNEFLNQAEYLK 419 (447)
Q Consensus 343 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~~~~g~~D~~~~--~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~ 419 (447)
....+.++++.+++++++.+... .. ....++||+++| ...|+|++.|||+.. ..|+++|+++++++..
T Consensus 266 -----~~~~~~~l~~~l~~~a~~~gi~~-~~~~~~~ggsDa~~~~~~~~GiPtv~lg~~~~---~~Hs~~E~v~~~dl~~ 336 (353)
T 1y0y_A 266 -----SVICHPTIVRWLEELAKKHEIPY-QLEILLGGGTDAGAIHLTKAGVPTGALSVPAR---YIHSNTEVVDERDVDA 336 (353)
T ss_dssp -----TEECCHHHHHHHHHHHHHTTCCE-EEEECSSCCCTHHHHTTSTTCCCEEEEEEEEB---SCSSSCEEEEHHHHHH
T ss_pred -----CCCCCHHHHHHHHHHHHHcCCCE-EEeecCCCCchHHHHHHhCCCCcEEEEccccc---ccCCHHHhcCHHHHHH
Confidence 12335689999999999987654 33 335689999999 567999999998864 5999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 013216 420 GIDIYESIIKAYAS 433 (447)
Q Consensus 420 ~~~~~~~~l~~l~~ 433 (447)
++++|..++..++.
T Consensus 337 ~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 337 TVELMTKALENIHE 350 (353)
T ss_dssp HHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHhhhh
Confidence 99999999988753
No 37
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.87 E-value=4.6e-21 Score=187.64 Aligned_cols=255 Identities=15% Similarity=0.129 Sum_probs=174.3
Q ss_pred hHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCC---
Q 013216 28 DSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS--- 104 (447)
Q Consensus 28 ~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~--- 104 (447)
.+++++|++|+++||+| ++|.+++++|.++|+++|++++. + ...|+++.++|.+ .|.|+|.||||||+.
T Consensus 5 ~~~~~~l~~Lv~~~s~s--g~e~~~~~~l~~~l~~~g~~~~~-d---~~gnlia~~~g~~--~~~i~l~aH~DtV~~~v~ 76 (346)
T 1vho_A 5 METGKLLMELSNLDGPS--GYETNVVSYIKSVIEPFVDEAKT-T---RHGSLIGYKKGKG--IGKLAFFAHVDEIGFVVS 76 (346)
T ss_dssp CCHHHHHHHHHHSCCBT--TCCHHHHHHHHHHHGGGCSEEEE-C---TTSCEEEEECCSS--SCEEEEEEECCBCCEEEE
T ss_pred HHHHHHHHHHHcCCCCC--cchHHHHHHHHHHHHhhCCEEEE-e---cCCcEEEEEcCCC--CceEEEEecCcccceEeE
Confidence 45789999999999975 78889999999999999998764 3 4459999987752 488999999999952
Q ss_pred ----------CCCCCCcCCC--------------cee-------------------------------------------
Q 013216 105 ----------EPSKWSHHPF--------------GAH------------------------------------------- 117 (447)
Q Consensus 105 ----------~~~~W~~~Pf--------------~~~------------------------------------------- 117 (447)
.-.+|...++ .+.
T Consensus 77 ~i~~G~l~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~ 156 (346)
T 1vho_A 77 KVEGQFARLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVID 156 (346)
T ss_dssp EEETTEEEEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEEC
T ss_pred EecCCeEEEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEc
Confidence 0123532211 111
Q ss_pred ----eCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCceEEEEec
Q 013216 118 ----LDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDE 193 (447)
Q Consensus 118 ----~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~d~ 193 (447)
+. +++++||+ .|+|.++++++.+++.|.+.+ ++.++.++|+.+||.|+ .|+..... .+. .++.+++|.
T Consensus 157 ~~~~~~-g~~i~g~~-~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~-~Ga~~~~~--~i~-~~~~i~~D~ 228 (346)
T 1vho_A 157 QTAFET-NGKVVGKA-LDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEETGC-LGALTGAY--EIN-PDAAIVMDV 228 (346)
T ss_dssp CCCEEE-TTEEEETT-HHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSSSH-HHHHHTTC--CCC-CSEEEEEEE
T ss_pred cchhhh-cCeEEecc-CccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcccch-hhHHHHhc--ccC-CCEEEEeec
Confidence 11 36799994 799999999999999987654 56899999999999985 67776432 122 355666552
Q ss_pred CCcCcCCcceeEeeeeeeEEEEEEEeecCCccCC-CCCCCHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeee
Q 013216 194 GLASTTEDYRAFYAERCPWWLVIKARGAPGHGAK-LYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAF 272 (447)
Q Consensus 194 g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~-p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 272 (447)
. |++. |.. + .
T Consensus 229 ~-----------------------------~~~~~~~~-~------------------------------------~--- 239 (346)
T 1vho_A 229 T-----------------------------FASEPPFS-D------------------------------------H--- 239 (346)
T ss_dssp E-----------------------------CCCCTTSC-C------------------------------------C---
T ss_pred c-----------------------------cccCCCCC-c------------------------------------c---
Confidence 1 1110 000 0 0
Q ss_pred eecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCcccccCCC
Q 013216 273 LKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPILTATDSS 352 (447)
Q Consensus 273 i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 352 (447)
.. ...+..++ . ....+
T Consensus 240 ~~---------------------------------------------~~~g~~i~------------~-------~~~~~ 255 (346)
T 1vho_A 240 IE---------------------------------------------LGKGPVIG------------L-------GPVVD 255 (346)
T ss_dssp CC---------------------------------------------TTSCCEEE------------C-------STTSC
T ss_pred cc---------------------------------------------cCCCceEE------------e-------CCcCC
Confidence 00 00112333 1 12346
Q ss_pred ChHHHHHHHHHHHhcCCCCCceec-C-CCcchHHHH--HcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHH
Q 013216 353 NPWWNLLEEAVRKANGKLGKPEIF-P-ASTDARYFR--ERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESII 428 (447)
Q Consensus 353 ~~~~~~~~~a~~~~~~~~~~~~~~-~-g~~D~~~~~--~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l 428 (447)
.++++.+++++++.+.+. ..... . |+||++++. ..|+|++.+||+.. ..|+++|+++++++..++++|..++
T Consensus 256 ~~l~~~~~~~a~~~gi~~-~~~~~~g~ggsDa~~~~~~~~gipt~~lg~~~~---~~Hs~~E~~~~~dl~~~~~ll~~~~ 331 (346)
T 1vho_A 256 RNLVQKIIEIAKKHNVSL-QEEAVGGRSGTETDFVQLVRNGVRTSLISIPLK---YMHTPVEMVDPRDVEELARLLSLVA 331 (346)
T ss_dssp HHHHHHHHHHHHHTTCCC-EEESSCCC----CTTHHHHHTTCEEEEEEEECB---STTSTTEEECHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCE-EEEeCCCCCCchHHHHHHhCCCCcEEEEehhhc---ccccHHHhcCHHHHHHHHHHHHHHH
Confidence 788999999999987665 44434 4 889999884 57999999998865 4999999999999999999999999
Q ss_pred HHHHhhc
Q 013216 429 KAYASYV 435 (447)
Q Consensus 429 ~~l~~~~ 435 (447)
..++...
T Consensus 332 ~~~~~~~ 338 (346)
T 1vho_A 332 VELEVEG 338 (346)
T ss_dssp HHCC---
T ss_pred HHhhhhc
Confidence 9876543
No 38
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.86 E-value=1.2e-21 Score=189.47 Aligned_cols=250 Identities=14% Similarity=0.118 Sum_probs=172.3
Q ss_pred CChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEe--e-cCCCCeEEEEecCCCCCCCeEEEeecccc
Q 013216 25 KSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLE--F-AKNKPLILLKWPGSNPQLPSILLNSHTDV 101 (447)
Q Consensus 25 ~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~--~-~~~~~nl~~~~~g~~~~~~~ill~~H~Dt 101 (447)
...++++++|++|+++||.| ++|.+++++|.++|+++|++++..+ . ..+..|+++.++| + |+|+|.|||||
T Consensus 14 ~~~~~~~~~l~~Lv~i~s~s--g~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g---~-~~ill~aH~Dt 87 (321)
T 3cpx_A 14 NLYFQGMQLLKELCSIHAPS--GNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG---N-PRTAVFAHMDS 87 (321)
T ss_dssp GGGCCHHHHHHHHHHSCCBT--TCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES---S-CSEEEEEECCB
T ss_pred hHHHHHHHHHHHHHcCCCCC--CCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC---C-ceEEEEecCCc
Confidence 34567899999999999975 7888999999999999999766422 0 1124599999876 3 78999999999
Q ss_pred CC-----------CCC-CCCCcC---------CCce-----------------------------eeCCCCcEEecCccc
Q 013216 102 VP-----------SEP-SKWSHH---------PFGA-----------------------------HLDSQGNIFARGSQD 131 (447)
Q Consensus 102 vp-----------~~~-~~W~~~---------Pf~~-----------------------------~~~~~g~l~GrG~~D 131 (447)
|+ .++ ..|... ++.+ +.. +|+++|| +.|
T Consensus 88 V~~~v~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~-~g~i~~~-~~D 165 (321)
T 3cpx_A 88 IGFTVSYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREE-GDFILTP-YLD 165 (321)
T ss_dssp CEEEECSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEE-TTEEECT-THH
T ss_pred CCeEecccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEE-cCEEEEc-CCc
Confidence 94 332 122111 1111 111 3788889 589
Q ss_pred chhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHc--cccccCCceEEEEecCCcCcCCcceeEeeee
Q 013216 132 MKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFAD--SHVFNSLNVGIVLDEGLASTTEDYRAFYAER 209 (447)
Q Consensus 132 ~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~--~~~~~~~~~~~~~d~g~~~p~~~~~i~~~~~ 209 (447)
||+++++++.+++.+. . ++++|+.+||.|+ .|++.... ...+ ..++++++|.+.. ..
T Consensus 166 ~k~G~aa~l~al~~l~------~--i~~~~t~~EEvG~-~Ga~~a~~~~~~~~-~~~~~i~~D~~~~---~~-------- 224 (321)
T 3cpx_A 166 DRLGVWTALELAKTLE------H--GIIAFTCWEEHGG-GSVAYLARWIYETF-HVKQSLICDITWV---TE-------- 224 (321)
T ss_dssp HHHHHHHHHHHTTTCC------S--EEEEEESSTTTTC-CSHHHHHHHHHHHH-CCCEEEECCCEEC---CS--------
T ss_pred CHHHHHHHHHHHHHhc------C--cEEEEECCccCch-hcchhhhhcccccc-CCCEEEEEeCccc---cC--------
Confidence 9999999999987643 1 9999999999986 68875321 1122 2467888764311 11
Q ss_pred eeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCCCCCCCccccccC
Q 013216 210 CPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQP 289 (447)
Q Consensus 210 G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~~~~~~~~~n~iP 289 (447)
.. .+ ..|
T Consensus 225 ------------------------------------~~-------------------~~-----~~G------------- 231 (321)
T 3cpx_A 225 ------------------------------------GV-------------------EA-----GKG------------- 231 (321)
T ss_dssp ------------------------------------SS-------------------CT-----TSC-------------
T ss_pred ------------------------------------Cc-------------------cc-----CCC-------------
Confidence 00 00 000
Q ss_pred CceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcCC
Q 013216 290 SEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGK 369 (447)
Q Consensus 290 ~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~ 369 (447)
..++ +. . . ...+.++++.+++++++.+.+
T Consensus 232 ----------------------------------~~i~---~~-------~--~-----~~~~~~l~~~~~~~a~~~gi~ 260 (321)
T 3cpx_A 232 ----------------------------------VAIS---MR-------D--R-----MIPRKKYVNRIIELARQTDIP 260 (321)
T ss_dssp ----------------------------------EEEE---EE-------S--S-----SCCCHHHHHHHHHHHTTSSCC
T ss_pred ----------------------------------cEEE---EC-------C--C-----CCCCHHHHHHHHHHHHHcCCC
Confidence 1122 11 1 0 123566777777777777665
Q ss_pred CCCce-ecCCCcchHHH--HHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHH
Q 013216 370 LGKPE-IFPASTDARYF--RERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 431 (447)
Q Consensus 370 ~~~~~-~~~g~~D~~~~--~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l 431 (447)
. +.. ..+|+||++++ +..|+|++.+||+.. ..|+++|++.++++...++++..++..+
T Consensus 261 ~-q~~~~~~GGsD~~~~~~s~~Gipt~~lG~~~~---~~Hs~~E~~~~~dl~~~~~ll~~~~~~l 321 (321)
T 3cpx_A 261 F-QLEVEGAGASDGRELQLSPYPWDWCFIGAPEK---DAHTPNECVHKKDIESMVGLYKYLMEKL 321 (321)
T ss_dssp E-EEEECSSCCCHHHHHHHSSSCCBCCBEECEEB---STTSTTCEEEHHHHHHHHHHHHHHHHHC
T ss_pred E-EEEeCCCCCccHHHHHHhCCCCCEEEEchhhc---ccchhhhheeHHHHHHHHHHHHHHHHhC
Confidence 4 332 25789999998 556999999999876 5999999999999999999999988653
No 39
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.85 E-value=9.7e-20 Score=178.41 Aligned_cols=254 Identities=16% Similarity=0.204 Sum_probs=178.5
Q ss_pred HHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCC--------
Q 013216 32 ERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVP-------- 103 (447)
Q Consensus 32 ~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp-------- 103 (447)
++|++|+++||+| ++|.++++++.++|+++|++++. + ...|+++.++|. +.|+|+|.||||||+
T Consensus 7 ~~l~~Lv~~~s~s--g~e~~~~~~l~~~l~~~g~~v~~-d---~~gnlia~~~g~--~~~~vll~aH~DtV~~~v~~i~~ 78 (348)
T 1ylo_A 7 SLLKALSEADAIA--SSEQEVRQILLEEAARLQKEVRF-D---GLGSVLIRLNES--TGPKVMICAHMDEVGFMVRSISR 78 (348)
T ss_dssp HHHHHHHHSCCBT--TBCHHHHHHHHHHHHHTTCCEEE-C---TTCCEEEECCCC--SSCEEEEEEECCCCEEEEEEECT
T ss_pred HHHHHHHcCCCCC--CchHHHHHHHHHHHHhhCCEEEE-e---cCCCEEEEecCC--CCceEEEEEcCCccceEEEEECC
Confidence 7899999999985 78889999999999999998763 3 344999998765 348999999999996
Q ss_pred --------CCCCCCC---c-------------------------------------------------------CCCcee
Q 013216 104 --------SEPSKWS---H-------------------------------------------------------HPFGAH 117 (447)
Q Consensus 104 --------~~~~~W~---~-------------------------------------------------------~Pf~~~ 117 (447)
.+.-.|. . ++|..
T Consensus 79 ~G~~~~~~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~- 157 (348)
T 1ylo_A 79 EGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQV- 157 (348)
T ss_dssp TCCEEEEEESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEE-
T ss_pred CCeEEEEecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEE-
Confidence 2211110 0 11211
Q ss_pred eCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCCceEEEEecCCcC
Q 013216 118 LDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLAS 197 (447)
Q Consensus 118 ~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~ 197 (447)
.. +|+++|| +.|||.++++++.+++.+.+.+ ++.++.++|+.+||.|+ .|+..... .+. .++.+++|....
T Consensus 158 ~~-~~~~~~~-~~D~k~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~-~Ga~~~~~--~i~-~~~~i~~D~~~~- 228 (348)
T 1ylo_A 158 LP-HQRVMGK-AFDDRLSCYLLVTLLRELHDAE--LPAEVWLVASSSEEVGL-RGGQTATR--AVS-PDVAIVLDTACW- 228 (348)
T ss_dssp ET-TTEEEET-THHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTTSS-HHHHHHHH--HHC-CSEEEEECCCCC-
T ss_pred ec-CCEEEec-CcccHHHHHHHHHHHHHhhhcC--CCceEEEEEEcccccch-hHHHHhhc--ccC-CCEEEEEecccc-
Confidence 24 7899999 6899999999999999987653 56899999999999986 68766543 222 356677763210
Q ss_pred cCCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhHHHHHhccccCCCcceeeeeeeecCC
Q 013216 198 TTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGT 277 (447)
Q Consensus 198 p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~g~ 277 (447)
+ ..|.. +. .. . +.-|
T Consensus 229 ----------------------~-----~~~~~-~~-----------~~--------------------~-----~~~~- 243 (348)
T 1ylo_A 229 ----------------------A-----KNFDY-GA-----------AN--------------------H-----RQIG- 243 (348)
T ss_dssp ----------------------S-----STTCC-ST-----------TC--------------------C-----CCTT-
T ss_pred ----------------------C-----CCCCC-Cc-----------cc--------------------c-----ccCC-
Confidence 0 01110 10 00 0 0000
Q ss_pred CCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCcccccCCCChHHH
Q 013216 278 PSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWN 357 (447)
Q Consensus 278 ~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 357 (447)
.+..++ +. .. ....+..+++
T Consensus 244 --------------------------------------------~G~~i~---~~-------~~------~~~~~~~l~~ 263 (348)
T 1ylo_A 244 --------------------------------------------NGPMLV---LS-------DK------SLIAPPKLTA 263 (348)
T ss_dssp --------------------------------------------SCCEEE---EE-------CS------SCBCCHHHHH
T ss_pred --------------------------------------------CCcEEE---Ee-------CC------CCCCCHHHHH
Confidence 011122 11 00 1223568889
Q ss_pred HHHHHHHHhcCCCCCc-eecCCCcchHHHH--HcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013216 358 LLEEAVRKANGKLGKP-EIFPASTDARYFR--ERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 432 (447)
Q Consensus 358 ~~~~a~~~~~~~~~~~-~~~~g~~D~~~~~--~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~ 432 (447)
.+++++++.+.+. .. ...+|+||++++. ..|+|++.+||+.. ..|+++|+++++++..++++|..++..++
T Consensus 264 ~~~~~a~~~gi~~-~~~~~~~ggsDa~~~~~~~~gipt~~lg~~~~---~~Hs~~E~~~~~d~~~~~~ll~~~~~~l~ 337 (348)
T 1ylo_A 264 WIETVAAEIGVPL-QADMFSNGGTDGGAVHLTGTGVPTLVMGPATR---HGHCAASIADCRDILQMEQLLSALIQRLT 337 (348)
T ss_dssp HHHHHHHHHTCCC-EEEECSSCCCHHHHHHTSTTCCCEEEEECCCB---SCSSSCEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCCe-EEeecCCCcchHHHHHHhcCCCCEEEECcccC---cCCCcceEeeHHHHHHHHHHHHHHHHHhh
Confidence 9999999988765 33 3356899999995 45999999999875 49999999999999999999999998764
No 40
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.80 E-value=1e-19 Score=174.32 Aligned_cols=156 Identities=21% Similarity=0.245 Sum_probs=122.3
Q ss_pred CCChhHHHHHHHhhhcccCCC-CCCChhHHHHHHHHHHHHCC--Cc-eEEEeec---CCCCeEEEEecCCCCCCCeEEEe
Q 013216 24 AKSDDSIIERFRAYLQIDTSQ-PNPDYTNASKFILAQAEALS--LE-SQTLEFA---KNKPLILLKWPGSNPQLPSILLN 96 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s-~~~~e~~~~~~i~~~l~~~G--~~-~~~~~~~---~~~~nl~~~~~g~~~~~~~ill~ 96 (447)
+.+.++++++|++|++|++.. .++.+.++++||.++|+++| ++ ++..... .+.+||+++++|.++..+.|+|.
T Consensus 16 ~~~~~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~ 95 (299)
T 1rtq_A 16 QVDASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIG 95 (299)
T ss_dssp GCCHHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEE
T ss_pred hcCHHHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEE
Confidence 346789999999999999753 34567899999999999986 43 3322210 12469999998864224789999
Q ss_pred eccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHH
Q 013216 97 SHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKF 176 (447)
Q Consensus 97 ~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~ 176 (447)
||+|+||. .|. ++++||||+.|||++++++|++++.|.+.+.+++++|+|+|+++||.|. .|++.+
T Consensus 96 aH~D~v~~---~~~----------~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~-~Gs~~~ 161 (299)
T 1rtq_A 96 GHLDSTIG---SHT----------NEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEEVGL-RGSQDL 161 (299)
T ss_dssp EECCCCSS---TTC----------CTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTS-HHHHHH
T ss_pred eccccCCC---cCc----------CCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCccCCc-hhHHHH
Confidence 99999983 353 5689999999999999999999999999888889999999999999985 799999
Q ss_pred Hcccc--ccCCceEEEEec
Q 013216 177 ADSHV--FNSLNVGIVLDE 193 (447)
Q Consensus 177 ~~~~~--~~~~~~~~~~d~ 193 (447)
+++.. ..++++.+++|.
T Consensus 162 ~~~~~~~~~~~~~~i~~D~ 180 (299)
T 1rtq_A 162 ANQYKSEGKNVVSALQLDM 180 (299)
T ss_dssp HHHHHHTTCEEEEEEECSC
T ss_pred HHhhhhccccEEEEEEecC
Confidence 87543 223445666664
No 41
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.80 E-value=1.6e-19 Score=171.55 Aligned_cols=148 Identities=18% Similarity=0.309 Sum_probs=122.0
Q ss_pred CCChhHHHHHHHhhhcccCCCCC------CChhHHHHHHHHHHHHCCCceEEEeecC---CCCeEEEEecCCCCCCCeEE
Q 013216 24 AKSDDSIIERFRAYLQIDTSQPN------PDYTNASKFILAQAEALSLESQTLEFAK---NKPLILLKWPGSNPQLPSIL 94 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~s~~------~~e~~~~~~i~~~l~~~G~~~~~~~~~~---~~~nl~~~~~g~~~~~~~il 94 (447)
+.+.++++++|++|++|||+|+. .++.++++||.++|+++|++++...... ..+||++.++|.++ .+.|+
T Consensus 3 ~i~~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~-~~~i~ 81 (284)
T 1tkj_A 3 DIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDP-NKVLM 81 (284)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEE-EEEEE
T ss_pred cCCHHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCC-CCEEE
Confidence 56789999999999999998731 1578999999999999999988654421 24699999987533 37899
Q ss_pred EeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHH
Q 013216 95 LNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAE 174 (447)
Q Consensus 95 l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~ 174 (447)
|.+|+|+||. |||+.|+|++++++|++++.|.+.+.+++++|+|+|+++||.|. .|++
T Consensus 82 l~aH~D~v~~---------------------g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~-~Gs~ 139 (284)
T 1tkj_A 82 AGAHLDSVSS---------------------GAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGL-IGSK 139 (284)
T ss_dssp EEEECCCCTT---------------------SCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTS-HHHH
T ss_pred EEeecCCCCC---------------------CCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCC-cCHH
Confidence 9999999985 35899999999999999999999888889999999999999985 7999
Q ss_pred HHHcccc---ccCCceEEEEecC
Q 013216 175 KFADSHV---FNSLNVGIVLDEG 194 (447)
Q Consensus 175 ~~~~~~~---~~~~~~~~~~d~g 194 (447)
.++++.. ..++++.+++|.+
T Consensus 140 ~~~~~~~~~~~~~~~~~i~~D~~ 162 (284)
T 1tkj_A 140 FYVNNLPSADRSKLAGYLNFDMI 162 (284)
T ss_dssp HHHHHSCHHHHTTEEEEEEECCC
T ss_pred HHHhhCccchhhcEEEEEEecCC
Confidence 9987632 2345677777753
No 42
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.76 E-value=9e-18 Score=160.73 Aligned_cols=159 Identities=18% Similarity=0.201 Sum_probs=127.7
Q ss_pred CCCChhHHHHHHHhhhcccCCC-CCCChhHHHHHHHHHHHHCCCceEEEeec----CC----CCeEEEEecCCCCCCCeE
Q 013216 23 PAKSDDSIIERFRAYLQIDTSQ-PNPDYTNASKFILAQAEALSLESQTLEFA----KN----KPLILLKWPGSNPQLPSI 93 (447)
Q Consensus 23 ~~~~~~~~~~~l~~l~~ips~s-~~~~e~~~~~~i~~~l~~~G~~~~~~~~~----~~----~~nl~~~~~g~~~~~~~i 93 (447)
.+-+.+++++.+++|+++.+.. .+..+.++++||.++|+++|++++..... .+ ..||+++++|.. .+.|
T Consensus 20 ~~~~~~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~--~~~i 97 (309)
T 3tc8_A 20 PDFNADSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPEN--SKRV 97 (309)
T ss_dssp CCCCHHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEE
T ss_pred cccCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCC--CceE
Confidence 3457899999999999887642 34568899999999999999998765432 12 369999999863 4899
Q ss_pred EEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCc----
Q 013216 94 LLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGG---- 169 (447)
Q Consensus 94 ll~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~---- 169 (447)
+|.||+|+|+.++ .+||. .+ ++.+| +|+.|+++|+|++|++++.|.+.+ ++++|.|+++.+||.|.
T Consensus 98 ll~aH~Dsv~~~~----~~p~~--~~-~~~~~-~Ga~D~~sGva~~Le~ar~l~~~~--~~~~i~f~~~~~EE~Gl~~~~ 167 (309)
T 3tc8_A 98 LLFAHWDSRPYSD----HDPDP--SK-HRTPL-DGADDGGSGVGALLEIARQIGQKA--PGIGIDIIFFDAEDYGTPEFV 167 (309)
T ss_dssp EEEEECCCCSCCT----TCSSG--GG-TTSCC-CCTTTTHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCSCSCCTTC
T ss_pred EEEecccCCCCCC----CCccc--cC-CCccc-cCcccchHhHHHHHHHHHHHHhCC--CCCcEEEEEECcccccccccc
Confidence 9999999999874 35775 44 78888 999999999999999999999875 78999999999999884
Q ss_pred --------ccCHHHHHccccc--cCCceEEEEec
Q 013216 170 --------HDGAEKFADSHVF--NSLNVGIVLDE 193 (447)
Q Consensus 170 --------~~G~~~~~~~~~~--~~~~~~~~~d~ 193 (447)
+.|+++++++... .++.+.+++|.
T Consensus 168 ~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~ 201 (309)
T 3tc8_A 168 TDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDM 201 (309)
T ss_dssp CSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEES
T ss_pred ccccccccchhHHHHHhCCCccccceEEEEEecc
Confidence 2699999876432 23456677774
No 43
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.74 E-value=2e-17 Score=158.29 Aligned_cols=159 Identities=18% Similarity=0.184 Sum_probs=112.0
Q ss_pred CCCChhHHHHHHHhhhcccCCC-CCCChhHHHHHHHHHHHHCCCceEEEeec----CC----CCeEEEEecCCCCCCCeE
Q 013216 23 PAKSDDSIIERFRAYLQIDTSQ-PNPDYTNASKFILAQAEALSLESQTLEFA----KN----KPLILLKWPGSNPQLPSI 93 (447)
Q Consensus 23 ~~~~~~~~~~~l~~l~~ips~s-~~~~e~~~~~~i~~~l~~~G~~~~~~~~~----~~----~~nl~~~~~g~~~~~~~i 93 (447)
.+-+.+++++.|++|++|++.. .+..+.++++||.++|+++|++++..... .+ ..||+++++|.. .+.|
T Consensus 22 ~~~~~~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~--~~~i 99 (314)
T 3gux_A 22 PEFDADSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPES--KKRI 99 (314)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEE
T ss_pred CCCCHHHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCC--CceE
Confidence 3457899999999999998754 34568899999999999999998765432 12 369999998863 4899
Q ss_pred EEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCc----
Q 013216 94 LLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGG---- 169 (447)
Q Consensus 94 ll~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~---- 169 (447)
+|.||+|+|+.++ .+|+. .. ++ .+++|+.|++++++++|++++.|.+.+ ++++|.|+++.+||.|.
T Consensus 100 ll~aH~Dsv~~~~----~~p~~--~~-~~-~~~~GA~D~~sGva~~Le~ar~l~~~~--~~~~i~fv~~~~EE~Gl~~~~ 169 (314)
T 3gux_A 100 LLCAHWDSRPYAD----NDPDP--KN-HH-TPILGVNDGASGVGVLLEIARQIQKEQ--PALGIDIVFFDSEDYGIPEFY 169 (314)
T ss_dssp EEEEECCCCC----------------------------CHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCCC------
T ss_pred EEEccccCCCcCC----CCccc--cc-CC-cccCCCcccHHHHHHHHHHHHHHHhCC--CCCcEEEEEECCccccccccc
Confidence 9999999999863 24553 32 44 456999999999999999999999875 78999999999999884
Q ss_pred ---------ccCHHHHHccccc--cCCceEEEEec
Q 013216 170 ---------HDGAEKFADSHVF--NSLNVGIVLDE 193 (447)
Q Consensus 170 ---------~~G~~~~~~~~~~--~~~~~~~~~d~ 193 (447)
..|+++++++... .++.+.+++|.
T Consensus 170 ~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm 204 (314)
T 3gux_A 170 DGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDM 204 (314)
T ss_dssp -----CTTSCHHHHHHHHSCSSTTCCCSEEEEEES
T ss_pred cccccccccchhHHHHHhCCcccccceeEEEEEec
Confidence 1699999876432 33456677764
No 44
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.69 E-value=1.3e-15 Score=148.19 Aligned_cols=257 Identities=17% Similarity=0.169 Sum_probs=173.2
Q ss_pred HHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCC---
Q 013216 29 SIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE--- 105 (447)
Q Consensus 29 ~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~--- 105 (447)
+++++|++|+++||+| +.|.++++++.++|+++|++++. + ...||++.++|.+++.|+|+|.||||+|+.-
T Consensus 4 ~~~~~l~~L~~ips~S--G~E~~v~~~l~~~l~~~g~~~~~-D---~~GNli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~ 77 (355)
T 3kl9_A 4 TLFSKIKEVTELAAVS--GHEAPVRAYLREKLTPHVDEVVT-D---GLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSE 77 (355)
T ss_dssp HHHHHHHHHHTSCCBT--TCCHHHHHHHHHHHGGGSSEEEE-C---TTSCEEEEECCCSTTCCEEEEEEECCBCEEEEEE
T ss_pred HHHHHHHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCEEEE-C---CCCeEEEEECCcCCCCCeEEEEeccccccceEEE
Confidence 6789999999999975 89999999999999999998774 3 4459999998764245899999999999320
Q ss_pred ----------C-CCCCcC--------------C-Cceee------------------------C----------------
Q 013216 106 ----------P-SKWSHH--------------P-FGAHL------------------------D---------------- 119 (447)
Q Consensus 106 ----------~-~~W~~~--------------P-f~~~~------------------------~---------------- 119 (447)
+ .+|... + +.+.+ +
T Consensus 78 I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~ 157 (355)
T 3kl9_A 78 IKPDGTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRP 157 (355)
T ss_dssp ECTTSCEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTCCT
T ss_pred ECCCCEEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCCCC
Confidence 0 122100 1 11110 0
Q ss_pred -------------C-CCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCC
Q 013216 120 -------------S-QGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSL 185 (447)
Q Consensus 120 -------------~-~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~ 185 (447)
. ++++.|| +.|++.++++++.+++.|.+. +++.+++++|+..||.|. .|+...... +. .
T Consensus 158 Gd~v~~d~~~~~~~~~~~i~s~-~lDnr~g~~~~l~~l~~l~~~--~~~~~v~~~ft~qEEvG~-~Ga~~a~~~--~~-p 230 (355)
T 3kl9_A 158 GDTIVPDSSAILTANEKNIISK-AWDNRYGVLMVSELAEALSGQ--KLGNELYLGSNVQEEVGL-RGAHTSTTK--FD-P 230 (355)
T ss_dssp TCEEEECCCCEECTTSSEEEES-CHHHHHHHHHHHHHHHHHSSC--CCSSEEEEEEESCCTTTS-HHHHHHHHH--HC-C
T ss_pred CCEEEeccceEEecCCCEEEee-ccccHHHHHHHHHHHHHhhhc--CCCceEEEEEECccccCc-chhHHHHhc--cC-C
Confidence 2 3467777 599999999999999988654 467899999999999996 677654332 21 2
Q ss_pred ceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhHHHHHhccccCCCc
Q 013216 186 NVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGEV 265 (447)
Q Consensus 186 ~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 265 (447)
|+++.+|.+..
T Consensus 231 d~~i~~D~~~a--------------------------------------------------------------------- 241 (355)
T 3kl9_A 231 EVFLAVDCSPA--------------------------------------------------------------------- 241 (355)
T ss_dssp SEEEEEEEEEC---------------------------------------------------------------------
T ss_pred CEEEEecCccC---------------------------------------------------------------------
Confidence 33333332110
Q ss_pred ceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCc
Q 013216 266 VSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPI 345 (447)
Q Consensus 266 ~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 345 (447)
+. . |+. .. ....+..+. +. ..
T Consensus 242 ----------~d------~----p~~------------------------~~-~lg~G~~i~---~~--------d~--- 262 (355)
T 3kl9_A 242 ----------GD------V----YGG------------------------QG-KIGDGTLIR---FY--------DP--- 262 (355)
T ss_dssp ----------CG------G----GTS------------------------SC-CTTSCEEEE---EE--------ET---
T ss_pred ----------CC------C----CCc------------------------cc-ccCCCcEEE---Ee--------cC---
Confidence 00 0 110 00 011122222 11 00
Q ss_pred ccccCCCChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHH--cCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHH
Q 013216 346 LTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRE--RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDI 423 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~--~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~ 423 (447)
....+..+.+.+++++++.+.+. +.....|+||++.+.. .|+|++.+|++.. ..|+|.|+++++++..++++
T Consensus 263 --~~~~~~~l~~~l~~~a~~~gIp~-q~~~~ggGtDa~~i~~a~~Gipt~~igvp~~---~~Hs~~E~~~~~Di~~~~~l 336 (355)
T 3kl9_A 263 --GHLLLPGMKDFLLTTAEEAGIKY-QYYCGKGGTDAGAAHLKNGGVPSTTIGVCAR---YIHSHQTLYAMDDFLEAQAF 336 (355)
T ss_dssp --TEECCHHHHHHHHHHHHHTTCCE-EEEECSSCCTHHHHTTSTTCCCEEEEEEEEB---SCSSSCEEEEHHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHHHHcCCCE-EEECCCcchHHHHHHHhCCCCCEEEEccCcC---CCCCcceEeeHHHHHHHHHH
Confidence 01224567777777777777654 3333458999998864 6899987876655 39999999999999999999
Q ss_pred HHHHHHHHH
Q 013216 424 YESIIKAYA 432 (447)
Q Consensus 424 ~~~~l~~l~ 432 (447)
+..++..+.
T Consensus 337 l~~~l~~l~ 345 (355)
T 3kl9_A 337 LQALVKKLD 345 (355)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHHhC
Confidence 999987764
No 45
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.68 E-value=1.9e-16 Score=153.32 Aligned_cols=138 Identities=18% Similarity=0.194 Sum_probs=108.7
Q ss_pred CChhHH-HHHHHhhhcccCCCCCCChhHHHHHHHHHHHH--CCCceEEEeecC-------CCCeEEEEecCCCCCCCeEE
Q 013216 25 KSDDSI-IERFRAYLQIDTSQPNPDYTNASKFILAQAEA--LSLESQTLEFAK-------NKPLILLKWPGSNPQLPSIL 94 (447)
Q Consensus 25 ~~~~~~-~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~--~G~~~~~~~~~~-------~~~nl~~~~~g~~~~~~~il 94 (447)
.+.+++ .++|++|+..+... +..+.++++||.++|++ +|++++...... ...||+++++|. ..+.|+
T Consensus 28 ~~~~~~~~~~l~~L~~~r~~~-s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~--~~~~i~ 104 (329)
T 2afw_A 28 TSISEMWQNDLQPLLIERYPG-SPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPT--AKRHLV 104 (329)
T ss_dssp CCHHHHHHHTTGGGCSCCCTT-SHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTT--SSEEEE
T ss_pred cCHHHHHHHHHHHHcCCCCCC-CHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCC--CCcEEE
Confidence 367888 89999997555432 34566899999999999 999887654321 146999999875 348899
Q ss_pred EeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHc--------CCCCceeEEEEeecCcc
Q 013216 95 LNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS--------GFQPVRSVYLSFVPDEE 166 (447)
Q Consensus 95 l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~--------~~~~~~~i~~~~~~~EE 166 (447)
|.||+|+||.+ .| ++++ |+|++|+++|+|++|++++.|.+. +.+++++|.|+++.+||
T Consensus 105 l~aH~Dsv~~~--~~-----------~~~~-~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE 170 (329)
T 2afw_A 105 LACHYDSKYFS--HW-----------NNRV-FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEE 170 (329)
T ss_dssp EEEECCCCCCC--CB-----------TTBC-CCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCS
T ss_pred EEEeccCCCcC--cc-----------cCcC-CCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCcc
Confidence 99999999975 34 3454 899999999999999999999876 35688999999999999
Q ss_pred c-------CcccCHHHHHcc
Q 013216 167 I-------GGHDGAEKFADS 179 (447)
Q Consensus 167 ~-------g~~~G~~~~~~~ 179 (447)
. +++.|++.++++
T Consensus 171 ~~~~~~~~~gl~Gs~~~~~~ 190 (329)
T 2afw_A 171 AFLHWSPQDSLYGSRHLAAK 190 (329)
T ss_dssp CSSSCCSSSSCHHHHHHHHH
T ss_pred cccccCCCccchhHHHHHHH
Confidence 7 135799998875
No 46
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.56 E-value=7.2e-14 Score=135.76 Aligned_cols=252 Identities=17% Similarity=0.202 Sum_probs=165.9
Q ss_pred HHHHHHHhhhcccCCCCCCChh-HHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCCC--
Q 013216 29 SIIERFRAYLQIDTSQPNPDYT-NASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE-- 105 (447)
Q Consensus 29 ~~~~~l~~l~~ips~s~~~~e~-~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~-- 105 (447)
+++++|++|+++||.| +.|. ++++++.++|+++|++++. + ...|+++.++|+ + |+|+|.||||+|+.-
T Consensus 10 ~~~~~l~~L~~ipspS--G~E~~~v~~~l~~~l~~~g~~~~~-D---~~GNvi~~~~g~--~-~~v~l~aHmDtVg~mV~ 80 (354)
T 2vpu_A 10 VDWKLMQEIIEAPGVS--GYEHLGIRDIVVDVLKEVADEVKV-D---KLGNVIAHFKGS--S-PRIMVAAHMDKIGVMVN 80 (354)
T ss_dssp CCHHHHHHHHHSCCBT--TCGGGTHHHHHHHHHHTTCSEEEE-C---TTCCEEEEECCS--S-SEEEEECCCCBCEEEEE
T ss_pred HHHHHHHHHHhCCCCC--cccHHHHHHHHHHHHHHhCCEEEE-c---CCCeEEEEEcCC--C-CEEEEEecccccceeEE
Confidence 4689999999999975 8999 9999999999999997764 3 445999999775 2 899999999999320
Q ss_pred -----------C-CCCC-------------c-----------CCC--c-------------eeeC---------------
Q 013216 106 -----------P-SKWS-------------H-----------HPF--G-------------AHLD--------------- 119 (447)
Q Consensus 106 -----------~-~~W~-------------~-----------~Pf--~-------------~~~~--------------- 119 (447)
+ .+|. . +|. + .+++
T Consensus 81 ~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~Gvi~~~~~H~~~~~~~~~~~~~~~~l~iD~g~~s~ee~~~~GI~ 160 (354)
T 2vpu_A 81 HIDKDGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSKEEAEEMGFR 160 (354)
T ss_dssp EECTTSCEEEEEESSCCGGGGTTCEEEEEETTEEEEEEECCCCSTTC---------CCGGGCCEECSCSSHHHHHHTTCC
T ss_pred EECCCCEEEEEccCCcccccccCCEEEEEcCCCcEEEEEcCCCccccCcccccccCCCcceEEEEecCCCHHHHHhcCCC
Confidence 0 1221 0 000 0 0000
Q ss_pred --------------CCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccccccCC
Q 013216 120 --------------SQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSL 185 (447)
Q Consensus 120 --------------~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~ 185 (447)
+++++.+|+ .|++.++++++.+++.|.+ +..+++++|+..||.|+ .|+..... .+. .
T Consensus 161 ~Gd~v~~d~~~~~~~~~~i~s~~-lDnr~g~~~~l~~l~~l~~----~~~~v~~~ft~qEEVG~-~ga~~aa~--~i~-p 231 (354)
T 2vpu_A 161 VGTVGEFAPNFTRLNEHRFATPY-LDDRICLYAMIEAARQLGD----HEADIYIVGSVQEEVGL-RGARVASY--AIN-P 231 (354)
T ss_dssp TTCEEEECCCCEECSSSEEECTT-HHHHHHHHHHHHHHHHCCC----CSSEEEEEECSCCTTTS-HHHHHHHH--HHC-C
T ss_pred CCCEEEEeeEEEEeCCceEEEec-CccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccCc-cchhhhhc--ccC-C
Confidence 245565655 8999999999999887642 67899999999999996 67765432 121 2
Q ss_pred ceEEEEecCCcCcCCcceeEeeeeeeEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhHHHHHhccccCCCc
Q 013216 186 NVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGEV 265 (447)
Q Consensus 186 ~~~~~~d~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 265 (447)
|+++.+|.+ |+..|. - ..
T Consensus 232 d~~i~~Dv~-----------------------------~a~dp~---~-----------~~------------------- 249 (354)
T 2vpu_A 232 EVGIAMDVT-----------------------------FAKQPH---D-----------KG------------------- 249 (354)
T ss_dssp SEEEEEEEE-----------------------------ECCCTT---S-----------TT-------------------
T ss_pred CEEEEeccc-----------------------------ccCCCC---c-----------cc-------------------
Confidence 444444321 111110 0 00
Q ss_pred ceeeeeeeecCCCCCCCccccccCCceEEEEeeecCCCCCHHHHHHHHHHHhccCCCCceEeeccccccccccccCCCCc
Q 013216 266 VSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFELGQFKQRASLHDKFGRPI 345 (447)
Q Consensus 266 ~t~~~~~i~~g~~~~~~~~~n~iP~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 345 (447)
. +...+..| | .+| -.
T Consensus 250 -~-~~~~lg~G------------p-----v~d----------------------------~~------------------ 264 (354)
T 2vpu_A 250 -K-IVPELGKG------------P-----VMD----------------------------VG------------------ 264 (354)
T ss_dssp -C-CCCCTTSC------------C-----EEE----------------------------ES------------------
T ss_pred -c-cCceECCc------------c-----eEc----------------------------CC------------------
Confidence 0 00001111 1 011 01
Q ss_pred ccccCCCChHHHHHHHHHHHhcCCCCCcee-cC-CCcchHHHHH--cCCCeEEEccCCCCCCCCCCCCccccHHHHHHHH
Q 013216 346 LTATDSSNPWWNLLEEAVRKANGKLGKPEI-FP-ASTDARYFRE--RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGI 421 (447)
Q Consensus 346 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~-g~~D~~~~~~--~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~ 421 (447)
...+..+.+.+++++++.+.+. +... .. |+||++.+.. .|+|++.+|++.. ..|++.|++.++++..++
T Consensus 265 ---~~~~~~l~~~l~~~a~~~gIp~-q~~~~~g~gGtDa~~i~~a~~Gipt~~Igvp~~---~~Hs~~E~~~~~D~~~~~ 337 (354)
T 2vpu_A 265 ---PNINPKLRAFADEVAKKYEIPL-QVEPSPRPTGTDANVMQINKEGVATAVLSIPIR---YMHSQVELADARDVDNTI 337 (354)
T ss_dssp ---TTSCHHHHHHHHHHHHHTTCCC-EEEECCSCCSSTHHHHHTSTTCCEEEEEEEEEB---STTSTTCEEEHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHcCCCc-EEEeCCCCCccHHHHHHHhcCCCCEEEECcccc---cCcCcceEeeHHHHHHHH
Confidence 1123467777777777776654 3222 23 7999998854 5899988887655 499999999999999999
Q ss_pred HHHHHHHHHHH
Q 013216 422 DIYESIIKAYA 432 (447)
Q Consensus 422 ~~~~~~l~~l~ 432 (447)
+++..++..+.
T Consensus 338 ~ll~~~l~~l~ 348 (354)
T 2vpu_A 338 KLAKALLEELK 348 (354)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHhcc
Confidence 99999988763
No 47
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.50 E-value=3e-13 Score=129.76 Aligned_cols=157 Identities=16% Similarity=0.159 Sum_probs=117.6
Q ss_pred CCChhHHHHHHHhhhcccCC-CCCCChhHHHHHHHHHHHHCCCceEEEeec----CC----CCeEEEEecCCCCCCCeEE
Q 013216 24 AKSDDSIIERFRAYLQIDTS-QPNPDYTNASKFILAQAEALSLESQTLEFA----KN----KPLILLKWPGSNPQLPSIL 94 (447)
Q Consensus 24 ~~~~~~~~~~l~~l~~ips~-s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~----~~----~~nl~~~~~g~~~~~~~il 94 (447)
+-+.++..+.+++|+++... ..+....++++||.+.|+++|++++..... .+ ..||+++++|.. .+.|+
T Consensus 21 ~f~~~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~--~~~i~ 98 (309)
T 4fuu_A 21 QFDADSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPES--KKRIA 98 (309)
T ss_dssp CCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEEE
T ss_pred ccCHHHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCC--CceEE
Confidence 34788999999999998653 334567789999999999999998765432 11 249999999864 47899
Q ss_pred EeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCc-----
Q 013216 95 LNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGG----- 169 (447)
Q Consensus 95 l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~----- 169 (447)
|.+|+|++|..+... ... .+.....|+.|+..|+|++|++++.|.+. +++++|.|+|..+||.|.
T Consensus 99 l~aH~Ds~~~~~~~~-------~~~-~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~ 168 (309)
T 4fuu_A 99 LFAHWDTRPWADNDA-------DEK-NHHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDIIFLDAEDYGTPQFYE 168 (309)
T ss_dssp EEEECCCCSCCTTCS-------SGG-GTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEEEECSSSCCCCTTCC
T ss_pred EEeecCCCCCCCCcc-------ccc-cccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEEeecccccCcccccc
Confidence 999999999864211 011 23334469999999999999999999886 478999999999999873
Q ss_pred --------ccCHHHHHccccc--cCCceEEEEe
Q 013216 170 --------HDGAEKFADSHVF--NSLNVGIVLD 192 (447)
Q Consensus 170 --------~~G~~~~~~~~~~--~~~~~~~~~d 192 (447)
+.|+++++++... ..+.+.+++|
T Consensus 169 ~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlD 201 (309)
T 4fuu_A 169 GKHKEEAWCLGSQYWSRNPHVQGYNARFGILLD 201 (309)
T ss_dssp SCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEEC
T ss_pred chhhhhhhhcchhHHHhcccccCcceEEEEeee
Confidence 2588888775432 2344556665
No 48
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.50 E-value=9.2e-14 Score=133.49 Aligned_cols=136 Identities=16% Similarity=0.144 Sum_probs=105.1
Q ss_pred CChhHHHH-HHHhhhcccCCCCCCChhHHHHHHHHHHHHC--CCceEEEeecC-------CCCeEEEEecCCCCCCCeEE
Q 013216 25 KSDDSIIE-RFRAYLQIDTSQPNPDYTNASKFILAQAEAL--SLESQTLEFAK-------NKPLILLKWPGSNPQLPSIL 94 (447)
Q Consensus 25 ~~~~~~~~-~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~--G~~~~~~~~~~-------~~~nl~~~~~g~~~~~~~il 94 (447)
.+.++.++ .|+.+ -++-...+..+.++++||.++|+++ |++++...... ...||+++++|.. .+.|+
T Consensus 36 ~~~~~~~~~~L~~~-~~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~--~~~iv 112 (330)
T 3pb6_X 36 LDPQRLWSTYLRPL-LVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRA--ARHLT 112 (330)
T ss_dssp CCHHHHHHHTTGGG-CSCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTS--SEEEE
T ss_pred CCHHHHHHHHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCC--CceEE
Confidence 35666666 56666 3444444567789999999999999 88887654321 1259999998864 47899
Q ss_pred EeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHc-----CCCCceeEEEEeecCccc--
Q 013216 95 LNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS-----GFQPVRSVYLSFVPDEEI-- 167 (447)
Q Consensus 95 l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~-----~~~~~~~i~~~~~~~EE~-- 167 (447)
+.+|+|+|+.. +|.-...|+.|+++|+|++|++++.|.+. +.+++++|.|+|..+||.
T Consensus 113 l~aH~Dsv~~~---------------~g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~ 177 (330)
T 3pb6_X 113 LACHYDSKLFP---------------PGSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALK 177 (330)
T ss_dssp EEEECCCCCCC---------------TTSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSS
T ss_pred EEeccCCCCCC---------------CCCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCccccc
Confidence 99999999853 12124679999999999999999999873 346899999999999998
Q ss_pred ------CcccCHHHHHcc
Q 013216 168 ------GGHDGAEKFADS 179 (447)
Q Consensus 168 ------g~~~G~~~~~~~ 179 (447)
| +.|+++++++
T Consensus 178 ~w~~~~g-l~GS~~~a~~ 194 (330)
T 3pb6_X 178 EWGPKDS-LYGSRHLAQL 194 (330)
T ss_dssp CCSTTSS-CHHHHHHHHH
T ss_pred ccCCCCC-CccHHHHHHH
Confidence 5 5799998874
No 49
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.47 E-value=4.8e-13 Score=128.56 Aligned_cols=135 Identities=14% Similarity=0.119 Sum_probs=104.1
Q ss_pred hHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecC--------CCCeEEEEecCCCCCCCeEEEeecc
Q 013216 28 DSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAK--------NKPLILLKWPGSNPQLPSILLNSHT 99 (447)
Q Consensus 28 ~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~--------~~~nl~~~~~g~~~~~~~ill~~H~ 99 (447)
..+-+.|..++ +|-+..+.+..++++||.++|+++|++++...... ...||+|+++|.. .+.|+|.||+
T Consensus 11 ~~~~~~l~~il-~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~--~~~vvl~aHy 87 (312)
T 4f9u_A 11 VHFNRTLDSIL-VPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQA--QNFLALACHY 87 (312)
T ss_dssp HHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTS--SEEEEEEEEC
T ss_pred HHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCC--CceEEEEEEE
Confidence 33444566654 67765566778999999999999999987654321 1249999998863 3789999999
Q ss_pred ccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHc-----CCCCceeEEEEeecCcccC------
Q 013216 100 DVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS-----GFQPVRSVYLSFVPDEEIG------ 168 (447)
Q Consensus 100 Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~-----~~~~~~~i~~~~~~~EE~g------ 168 (447)
|+++..+. .+ ..|+.|+.+|+|++|++++.|.+. +.+++++|.|+|..+||.|
T Consensus 88 Ds~~~~~~-------------~~---~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~ 151 (312)
T 4f9u_A 88 DSKYFPND-------------PG---FVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDA 151 (312)
T ss_dssp CCCCCTTC-------------TT---CCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSS
T ss_pred ecCCCCCC-------------CC---CCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCcc
Confidence 99876420 22 359999999999999999999763 4468899999999999977
Q ss_pred -cccCHHHHHcccc
Q 013216 169 -GHDGAEKFADSHV 181 (447)
Q Consensus 169 -~~~G~~~~~~~~~ 181 (447)
++.|+++++++..
T Consensus 152 ~~L~GS~~~a~~~~ 165 (312)
T 4f9u_A 152 DSVYGSKHLAAKLA 165 (312)
T ss_dssp SSCHHHHHHHHHHH
T ss_pred ccccChHHHHHHHH
Confidence 2579999988643
No 50
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.46 E-value=2.9e-13 Score=104.49 Aligned_cols=82 Identities=49% Similarity=0.941 Sum_probs=72.1
Q ss_pred ChHHHHHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013216 353 NPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 432 (447)
Q Consensus 353 ~~~~~~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~ 432 (447)
+|+++.+++++++++ ..+.+..++|+||+++|...|+|++.|||+......+|++||+++++++.+++++|..++..++
T Consensus 1 ~~~v~~l~~a~~~~g-~~~~~~~~~g~TDar~~~~~gip~v~fGPg~~~~~~~H~~dE~v~i~~l~~~~~iy~~~i~~~~ 79 (88)
T 1q7l_B 1 NPWWAAFSRVCKDMN-LTLEPEIMPAAGDNRYIRAVGVPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALA 79 (88)
T ss_dssp CHHHHHHHHHHHHTT-CCEEEEECCSCSHHHHHHHTTCCEEEECCCCSCCCCTTSTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHcC-CeeEeeeeceeCcHHHHHHcCCCEEEECCCCCCcccccCCCCeeEHHHHHHHHHHHHHHHHHHH
Confidence 478999999999984 3347778889999999999999999999997533479999999999999999999999999998
Q ss_pred hhc
Q 013216 433 SYV 435 (447)
Q Consensus 433 ~~~ 435 (447)
+..
T Consensus 80 ~~~ 82 (88)
T 1q7l_B 80 SVP 82 (88)
T ss_dssp TCC
T ss_pred cCC
Confidence 763
No 51
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.44 E-value=5.7e-13 Score=128.76 Aligned_cols=148 Identities=16% Similarity=0.133 Sum_probs=111.9
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecC--------CCCeEEEEecCCCCCCCeEEEee
Q 013216 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAK--------NKPLILLKWPGSNPQLPSILLNS 97 (447)
Q Consensus 26 ~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~--------~~~nl~~~~~g~~~~~~~ill~~ 97 (447)
+...+-+.|..++ +|-...+....++++||.+.|+++|++++...... ...||+++++|.. ...|+|.|
T Consensus 36 ~~~~~~~~l~~il-~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~--~~~i~l~a 112 (330)
T 4fai_A 36 DKLHLREAIDKIL-IPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNA--ERYLVLSC 112 (330)
T ss_dssp CHHHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTC--SEEEEEEE
T ss_pred HHHHHHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCC--CcEEEEEE
Confidence 4444555666664 67765566778999999999999999988654421 1249999998753 36899999
Q ss_pred ccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHc---CCCCceeEEEEeecCcccCc-----
Q 013216 98 HTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS---GFQPVRSVYLSFVPDEEIGG----- 169 (447)
Q Consensus 98 H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~---~~~~~~~i~~~~~~~EE~g~----- 169 (447)
|+|+++..+ .+ ..|+.|+..|+|++|++++.|.+. +.+++++|.|+|..+||.|-
T Consensus 113 HyDs~~~~~--------------~~---~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~~~ 175 (330)
T 4fai_A 113 HYDSKYMPG--------------VE---FLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPK 175 (330)
T ss_dssp ECCCCCCTT--------------SC---CCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCBTT
T ss_pred eeccccccc--------------CC---CCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEecccccccccccc
Confidence 999998642 22 349999999999999999999763 45789999999999999872
Q ss_pred --ccCHHHHHccc----cccCCceEEEEec
Q 013216 170 --HDGAEKFADSH----VFNSLNVGIVLDE 193 (447)
Q Consensus 170 --~~G~~~~~~~~----~~~~~~~~~~~d~ 193 (447)
+.|+++++++. ...++.+.+++|.
T Consensus 176 ~~llGS~~~a~~~~~~~~~~~i~~~inlDm 205 (330)
T 4fai_A 176 DSIYGARHLAKKWHHEGKLDRIDMLVLLDL 205 (330)
T ss_dssp BSCHHHHHHHHHHHHTTCSTTEEEEEEECS
T ss_pred chhhhhHHHHhcchhccchhceeEEEEecc
Confidence 35999998752 2344556677764
No 52
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=99.40 E-value=9.4e-12 Score=120.03 Aligned_cols=132 Identities=19% Similarity=0.197 Sum_probs=96.2
Q ss_pred HHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCeEEEeeccccCCC----
Q 013216 29 SIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS---- 104 (447)
Q Consensus 29 ~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~---- 104 (447)
-+.++|++|+++|+.| +.|.++++++.++|+++|.+++. + ...|+++.+ |. +.|+|+|.||||+|..
T Consensus 12 ~~~~~l~~L~~~pspS--G~E~~v~~~i~~~l~~~~~e~~~-D---~~Gnvi~~~-g~--~~~~v~l~aHmDevG~mV~~ 82 (343)
T 3isx_A 12 HMKELIRKLTEAFGPS--GREEEVRSIILEELEGHIDGHRI-D---GLGNLIVWK-GS--GEKKVILDAHIDEIGVVVTN 82 (343)
T ss_dssp CCHHHHHHHHHSCCBT--TCCHHHHHHHHHHHTTTCSEEEE-C---TTCCEEEEE-CC--CSSEEEEEEECCBCEEEEEE
T ss_pred HHHHHHHHHHhCCCCC--CchHHHHHHHHHHHHHhCCEEEE-C---CCCCEEEEE-CC--CCCEEEEEecccccceEEEE
Confidence 3567899999999975 89999999999999999987764 3 344999998 43 4589999999999932
Q ss_pred ----C-----C-CCCC-----cCC------Cceee------------------------C--------------------
Q 013216 105 ----E-----P-SKWS-----HHP------FGAHL------------------------D-------------------- 119 (447)
Q Consensus 105 ----~-----~-~~W~-----~~P------f~~~~------------------------~-------------------- 119 (447)
+ + .+|. ... +.+.+ +
T Consensus 83 I~~~G~l~~~~vGG~~~~~~~~~~v~i~t~~~Gvig~~~~H~~~~~~~~~~~~~~~l~iD~g~~s~ee~~~~I~vGd~v~ 162 (343)
T 3isx_A 83 VDDKGFLTIEPVGGVSPYMLLGKRIRFENGTIGVVGMEGETTEERQENVRKLSFDKLFIDIGANSREEAQKMCPIGSFGV 162 (343)
T ss_dssp ECTTSCEEEEEESSCCHHHHTTCEEEETTSCEEEEEECCCSHHHHHHHHHTCCGGGEEEECSCSSHHHHHHHSCTTCEEE
T ss_pred ECCCCeEEEEecCCcCccccCCcEEEEeccEEEEEecccccccChhhcccCCCcceEEEEeCCCCHHHHHhcCCCCCEEE
Confidence 0 0 2231 000 11111 0
Q ss_pred -------CCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHH
Q 013216 120 -------SQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKF 176 (447)
Q Consensus 120 -------~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~ 176 (447)
-++++.||+ .|++.++++++.+++.+.. +.+++++|+..||.|+ .|+...
T Consensus 163 ~~~~~~~~~~~i~s~~-lDdR~g~~~~l~~l~~l~~-----~~~~~~~ft~qEEVG~-~Ga~~a 219 (343)
T 3isx_A 163 YDSGFVEVSGKYVSKA-MDDRIGCAVIVEVFKRIKP-----AVTLYGVFSVQEEVGL-VGASVA 219 (343)
T ss_dssp ESCCCEEETTEEEESC-HHHHHHHHHHHHHHHHCCC-----SSEEEEEEECCCCTTS-CCSTTT
T ss_pred ecCceEEeccEEEecc-CccHHHHHHHHHHHHhccC-----CCeEEEEEECCcccCc-hhHHHH
Confidence 125566665 8999999999999877531 5799999999999996 577543
No 53
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.04 E-value=9.5e-10 Score=109.92 Aligned_cols=94 Identities=20% Similarity=0.121 Sum_probs=76.4
Q ss_pred CCeEEEEecCCCC---CCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCC
Q 013216 76 KPLILLKWPGSNP---QLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQ 152 (447)
Q Consensus 76 ~~nl~~~~~g~~~---~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~ 152 (447)
..||+++++|+.+ ..+.|++.+|+|+|+.+ +|+.|+++|++++|++++.|.+. +
T Consensus 203 ~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g---------------------~Ga~D~~~G~a~~le~~~~l~~~--~ 259 (421)
T 2ek8_A 203 SHNVIATKKPDANKKNTNDIIIIGSHHDSVEKA---------------------PGANDDASGVAVTLELARVMSKL--K 259 (421)
T ss_dssp EEEEEEEECCCSSTTCCCCEEEEEEECCCCTTC---------------------CCTTTTHHHHHHHHHHHHHHTTS--C
T ss_pred ccceEEEecCcccCCCCCCEEEEecccccCCCC---------------------CCCCCCcHhHHHHHHHHHHHhcc--C
Confidence 4699999998643 45789999999999843 59999999999999999999874 4
Q ss_pred CceeEEEEeecCcccCcccCHHHHHcccc---ccCCceEEEEec
Q 013216 153 PVRSVYLSFVPDEEIGGHDGAEKFADSHV---FNSLNVGIVLDE 193 (447)
Q Consensus 153 ~~~~i~~~~~~~EE~g~~~G~~~~~~~~~---~~~~~~~~~~d~ 193 (447)
++++|+|+++.+||.|. .|++.++++.. ..++.+.+++|.
T Consensus 260 ~~~~i~~~~~~~EE~g~-~Gs~~~~~~~~~~~~~~~~~~in~D~ 302 (421)
T 2ek8_A 260 TDTELRFITFGAEENGL-IGSKKYAASLSEDEIKRTIGMFQLDM 302 (421)
T ss_dssp CSSEEEEEEESSSTTTS-HHHHHHHTTCCHHHHHHEEEEEEECS
T ss_pred CCceEEEEEECCccccc-hhHHHHHHhCccchhhcEEEEEEecc
Confidence 67999999999999985 79999988632 223455677774
No 54
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.04 E-value=3.5e-10 Score=113.68 Aligned_cols=109 Identities=17% Similarity=0.149 Sum_probs=83.7
Q ss_pred hHHHHHHHHHHHHCC-CceEEE-ee----cCCCCeEEEEecCCCCCCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCc
Q 013216 50 TNASKFILAQAEALS-LESQTL-EF----AKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGN 123 (447)
Q Consensus 50 ~~~~~~i~~~l~~~G-~~~~~~-~~----~~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~ 123 (447)
.+.++.|.+.|+.-. +.++.. +. .....||+++++|..+..+.|+|.+|+|+++.+
T Consensus 203 ~~da~~L~~~l~~g~~~~v~l~~~~~~~~~~~~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~g------------------ 264 (444)
T 3iib_A 203 NPDADLINAMLKRDKEVVISLELGSERRGETTSYNVIAEVKGSTKADEIVLIGAHLDSWDEG------------------ 264 (444)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEEEEEEEEEEEEEEEEEEECCSTEEEEEEEEEEECCCCSSS------------------
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeeeEcCCceeEEEEEEEeCCCCCCCEEEEEeecccCCCC------------------
Confidence 355667767665421 222210 00 113469999999876334789999999999843
Q ss_pred EEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHHHccc
Q 013216 124 IFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH 180 (447)
Q Consensus 124 l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 180 (447)
+|+.|+++|++++|++++.|.+.+.+++++|+|+++.+||.|. .|+++++++.
T Consensus 265 ---~Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl-~Gs~~~~~~~ 317 (444)
T 3iib_A 265 ---TGAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGL-LGGKTYAKEH 317 (444)
T ss_dssp ---CCTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTS-HHHHHHHHHT
T ss_pred ---CCCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCC-cCHHHHHHhh
Confidence 4899999999999999999999888899999999999999985 7999998864
No 55
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.66 E-value=2.7e-08 Score=104.44 Aligned_cols=94 Identities=21% Similarity=0.186 Sum_probs=75.9
Q ss_pred CCeEEEEecCCCCCCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHH---cCCC
Q 013216 76 KPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKA---SGFQ 152 (447)
Q Consensus 76 ~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~---~~~~ 152 (447)
..||+++++|..+..+.|++.+|+|+++. |+.|+..|++++|++++.|.+ .+++
T Consensus 312 ~~NVi~~i~G~~~~~~~vllgaH~Ds~~~-----------------------Ga~D~~sG~a~lLe~ar~l~~~~~~g~~ 368 (707)
T 3fed_A 312 IYNVVGTIRGSVEPDRYVILGGHRDSWVF-----------------------GAIDPTSGVAVLQEIARSFGKLMSKGWR 368 (707)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSS-----------------------CTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEEEEEEeCCCCCCceEEEeccccCCCC-----------------------CCccCcHHHHHHHHHHHHHHhhhhccCC
Confidence 35999999987533478999999999863 458999999999999999986 5778
Q ss_pred CceeEEEEeecCcccCcccCHHHHHcccc---ccCCceEEEEec
Q 013216 153 PVRSVYLSFVPDEEIGGHDGAEKFADSHV---FNSLNVGIVLDE 193 (447)
Q Consensus 153 ~~~~i~~~~~~~EE~g~~~G~~~~~~~~~---~~~~~~~~~~d~ 193 (447)
++++|+|++..+||.|. .|+..++++.. ..++.+.+++|.
T Consensus 369 p~r~I~f~~~~~EE~Gl-~GS~~~~~~~~~~~~~~~~a~iNlD~ 411 (707)
T 3fed_A 369 PRRTIIFASWDAEEFGL-LGSTEWAEENVKILQERSIAYINSDS 411 (707)
T ss_dssp CSEEEEEEEESCGGGTS-HHHHHHHHHHHHHHHHHEEEEEECSC
T ss_pred CCCCEEEEEeCCccccc-hhHHHHHHhcchhhhhCEEEEEEecc
Confidence 99999999999999984 79999988642 233445667764
No 56
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.64 E-value=4.5e-08 Score=101.73 Aligned_cols=94 Identities=18% Similarity=0.183 Sum_probs=75.2
Q ss_pred CCeEEEEecCCCCCCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHc----CC
Q 013216 76 KPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS----GF 151 (447)
Q Consensus 76 ~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~----~~ 151 (447)
..||+++++|.....+.|++.+|+|++.+ |+.|+..|++++|++++.|.+. ++
T Consensus 266 ~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~-----------------------Ga~D~~sG~a~lLe~ar~l~~~~~~~g~ 322 (640)
T 3kas_A 266 ILNIFGVIKGFVEPDHYVVVGAQRDAWGP-----------------------GAAKSGVGTALLLKLAQMFSDMVLKDGF 322 (640)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSC-----------------------CTTTTHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred EEEEEEEEeCCcCCCCceeeecccCCCCC-----------------------CCCcCcHHHHHHHHHHHHHHHhhhhcCC
Confidence 45999999987322478999999999742 5679999999999999999874 67
Q ss_pred CCceeEEEEeecCcccCcccCHHHHHcccc--c-cCCceEEEEec
Q 013216 152 QPVRSVYLSFVPDEEIGGHDGAEKFADSHV--F-NSLNVGIVLDE 193 (447)
Q Consensus 152 ~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~--~-~~~~~~~~~d~ 193 (447)
+++++|+|++..+||.|. .|+..++++.. + .++...+++|.
T Consensus 323 ~p~r~I~f~~~~~EE~gl-~GS~~~~~~~~~~l~~~~~a~iNlD~ 366 (640)
T 3kas_A 323 QPSRSIIFASWSAGDFGS-VGATEWLEGYLSSLHLKAFTYINLDK 366 (640)
T ss_dssp CCSEEEEEEEESSGGGTS-HHHHHHHHHTTTTGGGTEEEEEECTT
T ss_pred CCCCcEEEEEECCcccCc-hhHHHHHHhhhhhhhhCEEEEEeccc
Confidence 899999999999999984 79999998642 2 33445566653
No 57
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=96.31 E-value=0.014 Score=56.55 Aligned_cols=83 Identities=18% Similarity=0.155 Sum_probs=60.9
Q ss_pred eEEEEe--cCCCCCCCeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEecCcccchhHHHHHHHHHHHHHHcCCCCce
Q 013216 78 LILLKW--PGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVR 155 (447)
Q Consensus 78 nl~~~~--~g~~~~~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~ 155 (447)
.-++++ +|+. .+.|+|.+|+|+ | + +|+|+.+|+|++++.++.|++. +++.
T Consensus 167 l~y~e~~ipG~t--~~~IllsaH~cH-P-----------------~------~ANDNaSG~a~lleLar~l~~~--~~~~ 218 (435)
T 3k9t_A 167 LTYGEYYIRGEL--EEEILLTTYTCH-P-----------------S------MCNDNLSGVALITFIAKALSKL--KTKY 218 (435)
T ss_dssp EEEEEEEECCSS--SCEEEEEEECCC-C-----------------S------CTTTTHHHHHHHHHHHHHHTTS--CCSS
T ss_pred eEEEEEEecCCC--CCEEEEEEEcCC-C-----------------C------CCCccchHHHHHHHHHHHHhcC--CCCc
Confidence 344544 8863 489999999996 1 2 4788899999999999998764 4789
Q ss_pred eEEEEeecCcccCcccCHHHHHccc--cccCCceEEEEec
Q 013216 156 SVYLSFVPDEEIGGHDGAEKFADSH--VFNSLNVGIVLDE 193 (447)
Q Consensus 156 ~i~~~~~~~EE~g~~~G~~~~~~~~--~~~~~~~~~~~d~ 193 (447)
++.|+|.+ | ..|+..++.+. .++++...+++|.
T Consensus 219 t~rFvf~p----g-~iGS~~yl~~~~~~l~~i~a~lnLDm 253 (435)
T 3k9t_A 219 SYRFLFAP----E-TIGSITWLSRNEDKLKNIKMGLVATC 253 (435)
T ss_dssp EEEEEEEC----T-THHHHHHHHHCGGGGGGEEEEEECCS
T ss_pred eEEEEEcC----c-cHHHHHHHHhChHhhhceEEEEEEEE
Confidence 99999998 2 35788777654 2344455677763
No 58
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=94.89 E-value=0.039 Score=55.12 Aligned_cols=82 Identities=15% Similarity=0.159 Sum_probs=65.5
Q ss_pred CCChHHHHHHHHHHHhcCCCCCcee-----cCCCcchHHHH-HcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHH
Q 013216 351 SSNPWWNLLEEAVRKANGKLGKPEI-----FPASTDARYFR-ERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIY 424 (447)
Q Consensus 351 ~~~~~~~~~~~a~~~~~~~~~~~~~-----~~g~~D~~~~~-~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~ 424 (447)
.+..+...+++++++.+.+. +... .+|+|++.+.. +.|+|++.+|.... ..|++.|-+...|+...++++
T Consensus 404 t~~~~~~~l~~ia~~~~Ip~-Q~~v~r~D~~gGgTig~i~~s~~Gi~tvdIGiP~r---yMHS~~E~~~~~D~~~~v~Ll 479 (496)
T 3vat_A 404 SNAVSEALIREVASSVGVPL-QDLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQL---AMHSIRETACTTGVLQTITLF 479 (496)
T ss_dssp CCHHHHHHHHHHHHHHTCCC-EEECCCTTSCCCCCHHHHHHHHHTCEEEEEECEEE---STTSSSEEEESHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCE-EEEEecCCCCCcchHHHHHhcccCCcEEEecHhhh---ccccHHHHhhHHHHHHHHHHH
Confidence 36788889999999988765 3222 24777777665 56999999987766 499999999999999999999
Q ss_pred HHHHHHHHhhcc
Q 013216 425 ESIIKAYASYVQ 436 (447)
Q Consensus 425 ~~~l~~l~~~~~ 436 (447)
..++..+.+..+
T Consensus 480 ~af~~~~~~~~~ 491 (496)
T 3vat_A 480 KGFFELFPSLSR 491 (496)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHhHHHHhh
Confidence 999988876653
No 59
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=94.76 E-value=0.053 Score=54.82 Aligned_cols=81 Identities=14% Similarity=0.038 Sum_probs=64.7
Q ss_pred CCChHHHHHHHHHHHh------cCCCCCcee-----cCCCcchHHHH-HcCCCeEEEccCCCCCCCCCCCCccccHHHHH
Q 013216 351 SSNPWWNLLEEAVRKA------NGKLGKPEI-----FPASTDARYFR-ERGLPAIGFSPMANTPILLHDHNEFLNQAEYL 418 (447)
Q Consensus 351 ~~~~~~~~~~~a~~~~------~~~~~~~~~-----~~g~~D~~~~~-~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~ 418 (447)
.+..++..+++++++. +.+. +... .+|+|++.+.. +.|+|++.+|.... ..|++.|-+...++.
T Consensus 472 tn~~~~~~l~~iA~~~~~~~~~gIP~-Q~~v~rnD~~gGgTig~i~~s~~GIpTvdIGiP~r---yMHS~~E~~~~~Dv~ 547 (571)
T 4eme_A 472 TSPLHASLIKRTFELYYNKYKQQIKY-QNFMVKNDTPCGSTVGSMVAANLSMPGIDIGIPQL---AMHSIREIAAVHDVF 547 (571)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCCCCE-EEECCCSSSCCCCCSHHHHHHHHTCCEEEEECEEE---STTSSSEEEEHHHHH
T ss_pred cCHHHHHHHHHHHHhcccccCCCCCE-EEEEEcCCCCCcchHHHHHHhCCCCcEEEechhhh---ccchHHHHhhHHHHH
Confidence 3678889999999998 6654 2222 24777877665 67999999997766 499999999999999
Q ss_pred HHHHHHHHHHHHHHhhc
Q 013216 419 KGIDIYESIIKAYASYV 435 (447)
Q Consensus 419 ~~~~~~~~~l~~l~~~~ 435 (447)
.++++|..++..+..+.
T Consensus 548 ~~vkLl~aFl~~~~~~~ 564 (571)
T 4eme_A 548 FLIKGVFAFYTYYNQVL 564 (571)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHH
Confidence 99999999998887665
No 60
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=94.59 E-value=0.055 Score=53.65 Aligned_cols=76 Identities=14% Similarity=0.251 Sum_probs=58.7
Q ss_pred CCChHHHHHHHHHHHhcCCCCCce-e----cCCCcch-HHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHH
Q 013216 351 SSNPWWNLLEEAVRKANGKLGKPE-I----FPASTDA-RYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIY 424 (447)
Q Consensus 351 ~~~~~~~~~~~a~~~~~~~~~~~~-~----~~g~~D~-~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~ 424 (447)
.+..+...+++++++.+.+. +.. . .+||+|+ .+.++.|+|++-+|.... ..|++.|-+...|+...+++|
T Consensus 368 ~~~~~~~~~~~ia~~~~Ip~-Q~~~~gr~d~~gGstig~i~a~~Gi~tvdiGiP~l---~MHS~~E~~~~~D~~~~~~l~ 443 (450)
T 2glf_A 368 AHAEFVARVRKVLNEQGVIW-QVATLGKVDQGGGGTIAKFFAERGSDVIDMGPALL---GMHSPFEISSKADLFETYVAY 443 (450)
T ss_dssp CCHHHHHHHHHHHHHTTCCE-EECCSSSTTSCCCCCTHHHHHTTTSCEEEEECEEB---STTSSSEEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCE-EEEEeccCCCCCCCcHHHHHhCCCCcEEEechhhc---ccchHHHHhhHHHHHHHHHHH
Confidence 35678889999999987654 221 1 3355554 455666999999997766 499999999999999999999
Q ss_pred HHHHHH
Q 013216 425 ESIIKA 430 (447)
Q Consensus 425 ~~~l~~ 430 (447)
..++..
T Consensus 444 ~af~~~ 449 (450)
T 2glf_A 444 RSLMEK 449 (450)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988865
No 61
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=94.07 E-value=0.034 Score=55.34 Aligned_cols=74 Identities=14% Similarity=0.194 Sum_probs=59.2
Q ss_pred CCChHHHHHHHHHHHhcCCCCCcee------cCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHH
Q 013216 351 SSNPWWNLLEEAVRKANGKLGKPEI------FPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIY 424 (447)
Q Consensus 351 ~~~~~~~~~~~a~~~~~~~~~~~~~------~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~ 424 (447)
.+.++...+++++++.+.+. +... .+|+|++.++++.|+|++.+|+... ..|++.|.+...++...+++|
T Consensus 377 ~~~~~~~~l~~~a~~~~Ip~-Q~~~~~r~d~~~GgT~~~~~a~~Gi~tvdiGiP~~---~mHS~~E~~~~~Di~~~~~ll 452 (458)
T 1y7e_A 377 ADAELVSYIRQLLNKNNIAW-QVATLGKVEEGGGGTVAKFLAGYGIRTIDMGPAVI---SMHSPMEITSKFDLYNAYLAY 452 (458)
T ss_dssp -CHHHHHHHHHHHHHHTCCE-EEEEECC-----CHHHHHHHHHHTCEEEEECCEEB---STTSSSEEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCe-EEEEeeccCCCCcCcHHHHHhCCCCCEEEEchhhc---ccchHHHHhhHHHHHHHHHHH
Confidence 36778899999999988765 3322 3477777788888999999998876 499999999999999999988
Q ss_pred HHHH
Q 013216 425 ESII 428 (447)
Q Consensus 425 ~~~l 428 (447)
..++
T Consensus 453 ~af~ 456 (458)
T 1y7e_A 453 KAFY 456 (458)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 7764
No 62
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=92.97 E-value=0.043 Score=54.09 Aligned_cols=75 Identities=4% Similarity=0.096 Sum_probs=60.3
Q ss_pred CCChHHHHHHHHHHHhcCCCCCcee----cCCCcchHHHH--HcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHH
Q 013216 351 SSNPWWNLLEEAVRKANGKLGKPEI----FPASTDARYFR--ERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIY 424 (447)
Q Consensus 351 ~~~~~~~~~~~a~~~~~~~~~~~~~----~~g~~D~~~~~--~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~ 424 (447)
.+..+...+++++++.+.+. +... .+|+||++.+. +.|+|++.+|+... ..|++.|.+...++...+++|
T Consensus 343 ~~~~~~~~l~~~a~~~~Ip~-Q~~~~~~d~~gGsd~g~i~~~~~Gi~tvdiGip~~---~mHS~~E~~~~~D~~~~~~ll 418 (428)
T 2ijz_A 343 TNSETAGFFRHLCQDSEVPV-QSFVTRSDMGCGSTIGPITASQVGVRTVDIGLPTF---AMHSIRELAGSHDLAHLVKVL 418 (428)
T ss_dssp CCHHHHTTTTHHHHHTCCCC-CBCCCCSSCCCCCCCSTTTGGGGSCCEEEECCCCC---SCSSSSCCCCSSHHHHHHTTH
T ss_pred CCHHHHHHHHHHHHHcCCCe-EEEEEeCCCCccchHHHHHHhCCCCCEEEEchhhc---ccchHHHHhhHHHHHHHHHHH
Confidence 46678889999999988765 3222 45788877553 66999999998877 499999999999999999988
Q ss_pred HHHHH
Q 013216 425 ESIIK 429 (447)
Q Consensus 425 ~~~l~ 429 (447)
..++.
T Consensus 419 ~af~~ 423 (428)
T 2ijz_A 419 GAFYA 423 (428)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 88765
No 63
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=91.98 E-value=0.61 Score=43.13 Aligned_cols=81 Identities=16% Similarity=0.072 Sum_probs=57.7
Q ss_pred ChHHHHHHHHHHHhcCCCCCceec-CCCcchHHHHHcCCCeEEEccCCC------------------CCCCCCCCCcc--
Q 013216 353 NPWWNLLEEAVRKANGKLGKPEIF-PASTDARYFRERGLPAIGFSPMAN------------------TPILLHDHNEF-- 411 (447)
Q Consensus 353 ~~~~~~~~~a~~~~~~~~~~~~~~-~g~~D~~~~~~~g~p~~~~gp~~~------------------~~~~~H~~~E~-- 411 (447)
..+.+.+.+..++.+... ..... .+.+|...|.+.|+|++.+..... .....|++...
T Consensus 176 ~~l~~~~~~~~~~~gi~~-~~~~~~~~~sD~~~f~~~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~ 254 (284)
T 1tkj_A 176 PVIEKTFKNYFAGLNVPT-EIETEGDGRSDHAPFKNVGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLS 254 (284)
T ss_dssp HHHHHHHHHHHHHHTCCC-EECCSSTTCSTHHHHHHTTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTT
T ss_pred HHHHHHHHHHHHHcCCCc-ccCCCCCCCCchHHHHHCCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChh
Confidence 346667777777776543 21122 366898888889999987765410 12357998877
Q ss_pred -ccHHHHHHHHHHHHHHHHHHHhh
Q 013216 412 -LNQAEYLKGIDIYESIIKAYASY 434 (447)
Q Consensus 412 -v~~~~l~~~~~~~~~~l~~l~~~ 434 (447)
++.+++.+..++++.++..++..
T Consensus 255 ~id~~~l~~~~~~~~~~~~~la~~ 278 (284)
T 1tkj_A 255 NINDTALDRNSDAAAHAIWTLSSG 278 (284)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred hCCHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999988753
No 64
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=90.92 E-value=0.11 Score=51.61 Aligned_cols=74 Identities=15% Similarity=0.144 Sum_probs=58.3
Q ss_pred CCChHHHHHHHHHHHhcCCCCCce-e-----cCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHH
Q 013216 351 SSNPWWNLLEEAVRKANGKLGKPE-I-----FPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIY 424 (447)
Q Consensus 351 ~~~~~~~~~~~a~~~~~~~~~~~~-~-----~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~v~~~~l~~~~~~~ 424 (447)
.+..+...+++++++.+.+. +.. . .+|+|.+.++++.|+|++-+|+... ..|++.|.+...++...+++|
T Consensus 380 ~~~~~~~~l~~ia~~~~Ip~-Q~~~~gr~d~~~GgTig~~~a~~Gi~tvdiGiP~l---~MHS~~E~~~~~Di~~~~~l~ 455 (461)
T 2glj_A 380 ANPEYIAELRRILSKESVNW-QTAELGKVDQGGGGTIAYILAEYGMQVIDCGVALL---NMHAPWEISSKADIYETKNGY 455 (461)
T ss_dssp CCHHHHHHHHHHHHHTCCCE-EECCSSSSSSSCCCCTHHHHHTTTCBCCBBCCEEE---STTSSSEEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCe-EEEeeeccCCCCcccHHHHHhCCCCCEEEEchhhc---ccchHHHHhhHHHHHHHHHHH
Confidence 36778889999999987664 221 1 2467777777888999999988766 499999999999999999988
Q ss_pred HHHH
Q 013216 425 ESII 428 (447)
Q Consensus 425 ~~~l 428 (447)
..++
T Consensus 456 ~af~ 459 (461)
T 2glj_A 456 SAFL 459 (461)
T ss_dssp HTTS
T ss_pred HHHH
Confidence 7653
No 65
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=89.85 E-value=0.31 Score=48.39 Aligned_cols=64 Identities=11% Similarity=0.116 Sum_probs=50.3
Q ss_pred ecCCCcchHHHHHcCCCeEEEccCCCC-CCCCCCC---CccccHHHHHHHHHHHHHHHHHHHhhccCC
Q 013216 375 IFPASTDARYFRERGLPAIGFSPMANT-PILLHDH---NEFLNQAEYLKGIDIYESIIKAYASYVQHS 438 (447)
Q Consensus 375 ~~~g~~D~~~~~~~g~p~~~~gp~~~~-~~~~H~~---~E~v~~~~l~~~~~~~~~~l~~l~~~~~~~ 438 (447)
...++||...|...|+|++.+...... ....|++ -++++.+.+.+..++++.++..++...+..
T Consensus 370 ~~~~~SD~~~f~~~GiP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~~~~ 437 (444)
T 3iib_A 370 KASGGPDVSMLPALGVPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSKVEL 437 (444)
T ss_dssp CCCCCGGGTTSGGGTCCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred CCCCCCccHHHHHCCCCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 345789998888899999877654221 2357888 578999999999999999999998766443
No 66
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=85.37 E-value=4.4 Score=37.85 Aligned_cols=77 Identities=14% Similarity=0.117 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHHhcCCCCCceecC--CCcchHHHHH-cCCCeEEEccCC-----CCCCCCCCCC---ccccHHHHHHHHH
Q 013216 354 PWWNLLEEAVRKANGKLGKPEIFP--ASTDARYFRE-RGLPAIGFSPMA-----NTPILLHDHN---EFLNQAEYLKGID 422 (447)
Q Consensus 354 ~~~~~~~~a~~~~~~~~~~~~~~~--g~~D~~~~~~-~g~p~~~~gp~~-----~~~~~~H~~~---E~v~~~~l~~~~~ 422 (447)
.+.+.+.+.++.++....-..... ..+|...|.+ .|+|++.+.+.. ......|+++ |.++.+.+.+..+
T Consensus 221 ~l~~~~~~~a~~~g~~~~f~~~~~g~~~sDh~~f~~~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~~ 300 (309)
T 3tc8_A 221 PIVEMVWSAARDLGYGKYFINAAGGAITDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLKAAGQ 300 (309)
T ss_dssp HHHHHHHHHHHHHTCTTTEEEEECCCCCCHHHHHHHHHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcceeccCCCCCCCCccHHHHhcCCCCEEEEecccCcccCCCCCCCCCCcCChhhCCHHHHHHHHH
Confidence 355666666666765320111112 3689888888 899999875541 1124689999 9999999999999
Q ss_pred HHHHHHHH
Q 013216 423 IYESIIKA 430 (447)
Q Consensus 423 ~~~~~l~~ 430 (447)
+...+++.
T Consensus 301 ~~~~~vy~ 308 (309)
T 3tc8_A 301 TVLEVIYN 308 (309)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99988875
No 67
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=85.00 E-value=1.7 Score=40.34 Aligned_cols=87 Identities=13% Similarity=0.028 Sum_probs=54.2
Q ss_pred ChHHHHHHHHHHHhcCCCC-Ccee-cCCCcchHHHHHcCCCeEEEccCC--CCCCCCCCCCccccHHH-----HHHHHHH
Q 013216 353 NPWWNLLEEAVRKANGKLG-KPEI-FPASTDARYFRERGLPAIGFSPMA--NTPILLHDHNEFLNQAE-----YLKGIDI 423 (447)
Q Consensus 353 ~~~~~~~~~a~~~~~~~~~-~~~~-~~g~~D~~~~~~~g~p~~~~gp~~--~~~~~~H~~~E~v~~~~-----l~~~~~~ 423 (447)
..+.+.+.++.++.....+ .... ..++||...|.+.|+|++.+.... ......|++.+.++..+ +.+..++
T Consensus 199 ~~l~~~l~~~a~~~~~~i~~~~~~~~~~~sD~~~f~~~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l 278 (299)
T 1rtq_A 199 SNFTQYLTQLMDEYLPSLTYGFDTCGYACSDHASWHNAGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQL 278 (299)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEECCSSCCSTHHHHHHTTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHhCccCCcccCCCCCCCCcHHHHHHCCCCEEEecccccccCCCCCCCccccccccCccHHHHHHHHHH
Confidence 4466677777777631110 1111 126789988888999997543311 11136899998877655 4788889
Q ss_pred HHHHHHHHHhhccCCc
Q 013216 424 YESIIKAYASYVQHSK 439 (447)
Q Consensus 424 ~~~~l~~l~~~~~~~~ 439 (447)
+..++..|+..+...+
T Consensus 279 ~~~~~~~La~~~~~~~ 294 (299)
T 1rtq_A 279 GLAYAIEMGSATGDTP 294 (299)
T ss_dssp HHHHHHHHHHCCC---
T ss_pred HHHHHHHHhCCCcCCC
Confidence 9999988876654443
No 68
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=84.75 E-value=4.8 Score=39.29 Aligned_cols=75 Identities=21% Similarity=0.161 Sum_probs=54.3
Q ss_pred HHHHHHHHhcCCCCCceecCCCcchHHHHHcCCCeEEEccCCCCCCCCCCCCcc---ccHHHHHHHHHHHHHHHHHHHhh
Q 013216 358 LLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEF---LNQAEYLKGIDIYESIIKAYASY 434 (447)
Q Consensus 358 ~~~~a~~~~~~~~~~~~~~~g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~E~---v~~~~l~~~~~~~~~~l~~l~~~ 434 (447)
...+..+.++.. .+....++||...|.+.|+|++.|..... ....|++... ++.+.+....+++..++..++..
T Consensus 326 ~~~~~~~~~~~~--~~~~~~~~SD~~~F~~~GIP~~~~~~~~~-~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~la~~ 402 (421)
T 2ek8_A 326 LGAAASSRLSGV--LPYGQEGRSDHESFHALGIPAALFIHAPV-EPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAARP 402 (421)
T ss_dssp HHHHHHHHHTSC--CCEEECCSSTHHHHHTTTCCEEEEEEESC-CTTTTSTTCCGGGBCHHHHHHHHHHHHHHHHHHHSS
T ss_pred hHHHHHHhcCCC--CCCCCCCCCccHHHHHCCCCEEEEECCcC-CCCCCCcccchhhCCHHHHHHHHHHHHHHHHHHhCC
Confidence 344555666543 33344578898888889999987752221 1257998887 89999999999999999998765
Q ss_pred c
Q 013216 435 V 435 (447)
Q Consensus 435 ~ 435 (447)
+
T Consensus 403 ~ 403 (421)
T 2ek8_A 403 G 403 (421)
T ss_dssp S
T ss_pred C
Confidence 5
No 69
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=82.11 E-value=12 Score=37.25 Aligned_cols=119 Identities=12% Similarity=0.094 Sum_probs=70.5
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHC-CCceEEEeec----CCCCeE--------------EEEecCCCCCC
Q 013216 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEAL-SLESQTLEFA----KNKPLI--------------LLKWPGSNPQL 90 (447)
Q Consensus 30 ~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~-G~~~~~~~~~----~~~~nl--------------~~~~~g~~~~~ 90 (447)
-+.+.|+|++.|.-- -.-...++++.+.++++ |++++.++.. .|.+.+ +-++.|.++..
T Consensus 182 ~~~~aRdL~n~P~n~--~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~ 259 (497)
T 3h8g_F 182 GMAFTRDLGNLPPNL--CHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKKAD 259 (497)
T ss_dssp HHHHHHHHHHSCTTT--SCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSCTTS
T ss_pred HHHHHHHhhcCCccc--cCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEEECCCCCCC
Confidence 466788999998732 34457888889999999 9999876542 122122 22333332233
Q ss_pred CeEEEeeccccCCCCCCCCCcCCCceeeCCCCc-EE-ecCcccc---hhHHHHHHHHHHHHHHcCCCCceeEEEEeecCc
Q 013216 91 PSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGN-IF-ARGSQDM---KCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDE 165 (447)
Q Consensus 91 ~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~-l~-GrG~~D~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~E 165 (447)
++|+|.|-==| +|.+|. |- +.|=.+| ++|.|+.+.+++++.+.+ ++.+|+.+....|
T Consensus 260 ~~i~LVGKGiT----------------FDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~~~i~~~E 321 (497)
T 3h8g_F 260 KPFVLVGKGIT----------------FDTGGISLKPGAGMDEMKYDMCGAASVFGTLRAVLELQ--LPVNLVCLLACAE 321 (497)
T ss_dssp CCEEEEEEEEE----------------EECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEE
T ss_pred CcEEEEcCceE----------------eccCCccCCCccchhhccccchHHHHHHHHHHHHHHcC--CCeEEEEEEEeec
Confidence 44444442111 110111 00 0111233 377889999999999986 5689999998888
Q ss_pred ccC
Q 013216 166 EIG 168 (447)
Q Consensus 166 E~g 168 (447)
-.-
T Consensus 322 Nm~ 324 (497)
T 3h8g_F 322 NMP 324 (497)
T ss_dssp ECC
T ss_pred cCC
Confidence 643
No 70
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=80.21 E-value=12 Score=36.98 Aligned_cols=118 Identities=8% Similarity=-0.016 Sum_probs=68.1
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHC-CCceEEEeec----CCC-------------Ce-EEEEecCCCCCC
Q 013216 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEAL-SLESQTLEFA----KNK-------------PL-ILLKWPGSNPQL 90 (447)
Q Consensus 30 ~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~-G~~~~~~~~~----~~~-------------~n-l~~~~~g~~~~~ 90 (447)
-+.+.|+|++.|.-- -.-...++++++.++++ |++++.++.. .+. |- +.-++.|.++..
T Consensus 166 ~~~~aRdL~n~P~n~--~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~ 243 (486)
T 3pei_A 166 GQNYAKDLQNLPANI--CTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNEGD 243 (486)
T ss_dssp HHHHHHHHHHSCTTT--SCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCTTS
T ss_pred HHHHHHHHhcCChhh--cCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCCCC
Confidence 467889999999732 34457888888888888 8999876542 121 22 222333332233
Q ss_pred CeEEEeeccccCCCCCCCCCcCCCceeeCCCCcEEec--Cccc---chhHHHHHHHHHHHHHHcCCCCceeEEEEeecCc
Q 013216 91 PSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFAR--GSQD---MKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDE 165 (447)
Q Consensus 91 ~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~Gr--G~~D---~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~E 165 (447)
++|+|.|-==|-.. +|.=.-. |=.+ +++|.|+.+++++++.+.+ ++.+|+.+....|
T Consensus 244 ~~i~LVGKGiTFDs----------------GG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~--l~vnv~~~i~~~E 305 (486)
T 3pei_A 244 APIVLVGKGLVFDN----------------GGICIKQAAGMDSMKMDMGGVAAVMGTMKAIAMLN--LPVNVVGVMGLAE 305 (486)
T ss_dssp CCEEEEEEEEETEE----------------CC------------EECSHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEE
T ss_pred CcEEEEccceEEec----------------CCcccCCccchhhhhccchHHHHHHHHHHHHHHcC--CCcEEEEEEEeec
Confidence 44554443111111 1110000 1112 2478889999999999986 5689999888888
Q ss_pred cc
Q 013216 166 EI 167 (447)
Q Consensus 166 E~ 167 (447)
-.
T Consensus 306 Nm 307 (486)
T 3pei_A 306 NA 307 (486)
T ss_dssp C-
T ss_pred cC
Confidence 64
No 71
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=79.98 E-value=2.8 Score=41.37 Aligned_cols=75 Identities=12% Similarity=-0.007 Sum_probs=48.9
Q ss_pred hhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceE----------EEeecCCCCeEEEEecCCCCCCCeEEEe
Q 013216 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQ----------TLEFAKNKPLILLKWPGSNPQLPSILLN 96 (447)
Q Consensus 27 ~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~----------~~~~~~~~~nl~~~~~g~~~~~~~ill~ 96 (447)
.+++.+..++|+++=+-| +.+..+.+.+.++|++.||..- .+.......|+++...|..++.+.+++.
T Consensus 13 ~~~~~~~~~~~~~Fl~~s--~t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~ 90 (450)
T 2glf_A 13 KEEIEAFSKEYMEFMSKA--KTERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVV 90 (450)
T ss_dssp HHHHHHHHHHHHHHHHHC--SSHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEE
T ss_pred HHHHHHHHHHHHHHHHcC--CCHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEE
Confidence 344555555566555543 4567889999999999998531 0111111258999877753234789999
Q ss_pred eccccCC
Q 013216 97 SHTDVVP 103 (447)
Q Consensus 97 ~H~Dtvp 103 (447)
||+|.+.
T Consensus 91 AH~Dsp~ 97 (450)
T 2glf_A 91 AHIDSPR 97 (450)
T ss_dssp EECCCCE
T ss_pred EecccCC
Confidence 9999873
No 72
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=79.63 E-value=0.99 Score=44.79 Aligned_cols=46 Identities=26% Similarity=0.394 Sum_probs=34.8
Q ss_pred cEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHH
Q 013216 123 NIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAE 174 (447)
Q Consensus 123 ~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~ 174 (447)
.+.+++ -|++.++.++|.|++.+. .+...++++++..||.|+ .|+.
T Consensus 254 ~I~s~~-lDdr~~~~~~l~al~~~~----~~~~~~~~~~~d~EEVGs-~ga~ 299 (461)
T 2glj_A 254 MVMGYG-QDDRICAYTSFEAMLEMK----NAKKTCITILVDKEEVGS-IGAT 299 (461)
T ss_dssp EEEETT-HHHHHHHHHHHHHHHTCC----SCSSCEEEEEECCGGGTC-CTTT
T ss_pred EEEEec-chhHHHHHHHHHHHHhhc----cCCCeEEEEEEccCCCCC-cccc
Confidence 444444 899999999998877542 356899999999999986 4543
No 73
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=78.82 E-value=16 Score=36.27 Aligned_cols=125 Identities=11% Similarity=0.128 Sum_probs=68.4
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeec----CCCCeEEEEecCCCCCCCeEEEeeccccCCCC
Q 013216 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFA----KNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (447)
Q Consensus 30 ~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~----~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~ 105 (447)
.+.+.|+|++.|.-- -.-...++++.+.+++.|++++.++.. .|.+.+++.=+|+. ..|.++.. ++- |.+
T Consensus 199 ~~~~aRdL~n~P~n~--ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~-~pPrli~l-~y~--g~~ 272 (515)
T 3kzw_A 199 SINLARDFSNMPPNV--LTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSK-HKPRLVTI-TYN--GKD 272 (515)
T ss_dssp HHHHHHHHHHSCTTT--SCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSS-SCCEEEEE-EEE--SSC
T ss_pred HHHHHHHHhcCCccc--cCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCC-CCCEEEEE-EEC--CCC
Confidence 355789999999832 344577888888889999999876542 12222222223332 11222222 111 110
Q ss_pred CCCCCcCCCceeeCCCCcEEecCc---------ccc---hhHHHHHHHHHHHHHHcCCCCceeEEEEeecCccc
Q 013216 106 PSKWSHHPFGAHLDSQGNIFARGS---------QDM---KCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (447)
Q Consensus 106 ~~~W~~~Pf~~~~~~~g~l~GrG~---------~D~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (447)
+ ..+|....= .|.-|=-|- .+| ++|.|+.+++++++.+.+ ++.+|+.+....|-.
T Consensus 273 ~---~~~~i~LVG--KGiTFDsGG~slKp~~~M~~MK~DM~GAAaVlg~~~a~a~l~--lpvnv~~~i~~~ENm 339 (515)
T 3kzw_A 273 K---DEAPIALVG--KGITYDSGGYSIKTKNGMATMKFDMCGAANVVGIIEAASRLQ--LPVNIVGVLACAENM 339 (515)
T ss_dssp S---SCCCEEEEE--EEEEEECCTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTT--CSCEEEEEEEEEEEC
T ss_pred C---CCCcEEEec--CceEEecCCcCCCCccChhhchhchHHHHHHHHHHHHHHHcC--CCceEEEEEEeeccC
Confidence 0 011111110 111111111 223 377889999999999986 568999888888864
No 74
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=78.66 E-value=0.47 Score=47.10 Aligned_cols=48 Identities=35% Similarity=0.394 Sum_probs=33.2
Q ss_pred CcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHH
Q 013216 122 GNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAE 174 (447)
Q Consensus 122 g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~ 174 (447)
+.+.+++ -|++.+++++|.|++.+.+ .+...++++++..||.|+ .|+.
T Consensus 247 ~~I~s~~-lDdr~~~~~~l~al~~~~~---~~~~~~~~~~~d~EEVGs-~ga~ 294 (458)
T 1y7e_A 247 ALIGAYG-QDDKICVFTSLESIFDLEE---TPNKTAICFLVDKEEIGS-TGST 294 (458)
T ss_dssp CEEEESS-HHHHHHHHHHHHHHSSSSC---CCSSCEECCCBCSTTC-------
T ss_pred CeEEEec-CccHHHHHHHHHHHHhhhc---cCCceEEEEEEcccccCc-ccch
Confidence 4555555 8999999999999775532 356899999999999986 4554
No 75
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=76.69 E-value=24 Score=35.19 Aligned_cols=118 Identities=15% Similarity=0.145 Sum_probs=69.5
Q ss_pred HHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCC--CceEEEeec----CCCCeEE--------------EEecCCCC-C
Q 013216 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALS--LESQTLEFA----KNKPLIL--------------LKWPGSNP-Q 89 (447)
Q Consensus 31 ~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G--~~~~~~~~~----~~~~nl~--------------~~~~g~~~-~ 89 (447)
+.+.|+|++-|.-- -.-...+++.++.++++| ++++.++.. .|.+.++ -++.|.++ .
T Consensus 184 ~~laRdL~n~P~N~--~tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~~~~ 261 (503)
T 1gyt_A 184 IKAAKDLGNMPPNI--CNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASED 261 (503)
T ss_dssp HHHHHHHHHSCTTT--CSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCCCTT
T ss_pred HHHHHHHhcCChhh--cCHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCCCCC
Confidence 46688999988732 244578888889999999 999876542 1222222 23333221 1
Q ss_pred CCeEEEeeccccCCCCCCCCCcCCCceeeCCCCc-EE-ecCcccch---hHHHHHHHHHHHHHHcCCCCceeEEEEeecC
Q 013216 90 LPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGN-IF-ARGSQDMK---CVGMQYLEAIRRLKASGFQPVRSVYLSFVPD 164 (447)
Q Consensus 90 ~~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~-l~-GrG~~D~k---~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~ 164 (447)
.++|+|.|== .++|.+|. |- +.|=.+|| +|.|+.+++++++.+.+ ++.+|+.+....
T Consensus 262 ~~~i~LVGKG----------------ITFDsGGislKp~~~M~~MK~DM~GAAaVlg~~~aia~l~--l~vnV~~~i~~~ 323 (503)
T 1gyt_A 262 ARPIVLVGKG----------------LTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQ--LPINVIGVLAGC 323 (503)
T ss_dssp CCCEEEEEEE----------------EEEECCTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHHT--CSSEEEEEEEEE
T ss_pred CCcEEEEcCc----------------eEecCCCccccCCcChhhcccccchHHHHHHHHHHHHHcC--CCeeEEEEEEee
Confidence 2344444321 11111111 11 11223343 77889999999999986 568999999888
Q ss_pred cccC
Q 013216 165 EEIG 168 (447)
Q Consensus 165 EE~g 168 (447)
|-.-
T Consensus 324 ENm~ 327 (503)
T 1gyt_A 324 ENMP 327 (503)
T ss_dssp EECC
T ss_pred ccCC
Confidence 8643
No 76
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=76.38 E-value=1 Score=44.20 Aligned_cols=49 Identities=16% Similarity=0.029 Sum_probs=38.2
Q ss_pred CCcEEecCcccchhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccCcccCHHHH
Q 013216 121 QGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKF 176 (447)
Q Consensus 121 ~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~ 176 (447)
++.+.+++ -|++.+++++|.|++.+. ....++.++| ..||.|+ .|+...
T Consensus 226 ~~~I~s~~-lDdr~~~~~~l~al~~~~----~~~~~v~~~f-d~EEVGs-~ga~gA 274 (428)
T 2ijz_A 226 DEFIAGAR-LDNLLSCHAGLEALLNAE----GDENCILVCT-DHEEVGS-CSHCGA 274 (428)
T ss_dssp SSSSSCCC-SSCSSTTTTTTTHHHHTT----SCSSSCEEEE-CBSCTTT-TCHHHH
T ss_pred CCeEEeec-CccHHHHHHHHHHHHhcc----cCCceEEEEE-eccccCc-cchhhh
Confidence 56676666 899999999999988763 3557888888 8999997 577654
No 77
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=76.21 E-value=21 Score=35.42 Aligned_cols=126 Identities=9% Similarity=-0.005 Sum_probs=69.5
Q ss_pred HHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecC----CCCeEEEEecCCCCCCCeEEEeeccccCCC
Q 013216 29 SIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAK----NKPLILLKWPGSNPQLPSILLNSHTDVVPS 104 (447)
Q Consensus 29 ~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~----~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~ 104 (447)
+.+.+.|+|++.|.-- -.-...++.+++.++++|++++.++... |.+.+++.=+|+. ..|.++...+- |.
T Consensus 205 ~~~~laRdLvn~P~N~--~tP~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~-~pPrli~L~Y~---g~ 278 (522)
T 4efd_A 205 TSTQLCQRLVDAPPNL--LTTATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAF-EAPRLVTLLYT---PK 278 (522)
T ss_dssp HHHHHHHHHHHSCTTT--SCHHHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSS-SCCEEEEEEEC---CS
T ss_pred HHHHHHHHHhcCCchh--CCHHHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCC-CCCEEEEEEEC---CC
Confidence 4577899999999832 3455788888899999999998776431 2222333223332 12333322211 11
Q ss_pred CCCCCCcCCCceeeCCCCcEEecCc---------ccc---hhHHHHHHHHHHHHHHcCCCCceeEEEEeecCccc
Q 013216 105 EPSKWSHHPFGAHLDSQGNIFARGS---------QDM---KCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (447)
Q Consensus 105 ~~~~W~~~Pf~~~~~~~g~l~GrG~---------~D~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (447)
++. .+|....= .|.-|=-|- .+| ++|.|+.+++++++.+.+ ++.+|+.++...|-.
T Consensus 279 ~~~---~~~iaLVG--KGITFDSGGlsLKp~~~M~~MK~DMgGAAaVlga~~a~a~l~--lpvnV~~vl~~~ENm 346 (522)
T 4efd_A 279 GTP---VKKVSLVG--KGIVYDCGGLALKPADYMKLMKHDMGGAAAVFCGFLTAVRLQ--QPVQLSCTLCLAENA 346 (522)
T ss_dssp SCC---SEEEEEEE--EEEETCCCCSSSCHHHHHHHGGGTTHHHHHHHHHHHHHHHHT--CSEEEEEEEEEEECC
T ss_pred CCC---CCcEEEec--CceEeecCCccCCCccchhhcccccchHHHHHHHHHHHHHcC--CCceEEEEEEEeccC
Confidence 100 00100000 011111110 122 367788899999999876 568999988888864
No 78
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=75.36 E-value=22 Score=37.11 Aligned_cols=47 Identities=13% Similarity=0.154 Sum_probs=39.7
Q ss_pred CChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCc-eEEEe
Q 013216 25 KSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLE-SQTLE 71 (447)
Q Consensus 25 ~~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~-~~~~~ 71 (447)
.+.+.+.+.|+.|.++|-...+.++.++++|+++.|+++|++ ++..+
T Consensus 22 ~~~~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~~~ 69 (707)
T 3fed_A 22 MKAENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKLVH 69 (707)
T ss_dssp CCHHHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCHHHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeEEe
Confidence 366788999999999998876677889999999999999998 65443
No 79
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=73.52 E-value=46 Score=32.89 Aligned_cols=127 Identities=13% Similarity=0.024 Sum_probs=69.5
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecC----CCCeEEEEecCCCCCCCeEEEeeccccCCCC
Q 013216 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAK----NKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (447)
Q Consensus 30 ~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~----~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~ 105 (447)
.+.+.|+|++-|.-- -.-...++++.+.+++.|++++.++... +.+.+++.=+|+. ..|.++...+. |.+
T Consensus 169 ~~~~aR~L~n~P~n~--~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~-~pPrli~l~y~---~~~ 242 (491)
T 2hc9_A 169 SVRETARLIDTPANI--LTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGP-TPPAFVVLSHE---VPG 242 (491)
T ss_dssp HHHHHHHHHHSCTTT--SCHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSS-SCCEEEEEEEC---CTT
T ss_pred HHHHHHHHhcCCchh--CCHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCC-CCCEEEEEEeC---CCC
Confidence 456788899888732 2445788899999999999998776421 2222222223332 12333322221 111
Q ss_pred CCCCCcCCCce-----eeCCCCc-EE-ecCcccc---hhHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccC
Q 013216 106 PSKWSHHPFGA-----HLDSQGN-IF-ARGSQDM---KCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG 168 (447)
Q Consensus 106 ~~~W~~~Pf~~-----~~~~~g~-l~-GrG~~D~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g 168 (447)
+ .+|... ++|.+|. |- +.|=..| ++|.|+.+++++++.+.+ ++.+|+.++...|-.-
T Consensus 243 ~----~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~--l~vnv~~~l~~~ENm~ 309 (491)
T 2hc9_A 243 S----TEHIALVGKGVVYDTGGLQIKTKTGMPNMKRDMGGAAGMLEAYSALVKHG--FSQTLHACLCIVENNV 309 (491)
T ss_dssp C----SCEEEEEEEEEEEECCTTSCCCTTTSTTGGGGGHHHHHHHHHHHHHHTTT--CCSEEEEEEEEEEECC
T ss_pred C----CCcEEEEcCceEecCCCccCCCCcChhhccccccHHHHHHHHHHHHHHcC--CCceEEEEEEeeecCC
Confidence 0 011110 0110110 10 0111223 477889999999998875 5689999888888643
No 80
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=71.90 E-value=33 Score=33.91 Aligned_cols=129 Identities=15% Similarity=-0.008 Sum_probs=70.4
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCC--CceEEEeec----CCCCeEEEEecCCCCCCCeEEEeeccccCC
Q 013216 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALS--LESQTLEFA----KNKPLILLKWPGSNPQLPSILLNSHTDVVP 103 (447)
Q Consensus 30 ~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G--~~~~~~~~~----~~~~nl~~~~~g~~~~~~~ill~~H~Dtvp 103 (447)
-+.+.|+|++-|.-- -.-...++++++.++++| ++++.++.. .+.+.+++.=+|+. ..|.++...+. |
T Consensus 163 ~~~laRdLvn~P~N~--~tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~-~pPrli~l~y~---g 236 (484)
T 1lam_A 163 GQNLARRLMETPANE--MTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSE-EPPVFLEIHYK---G 236 (484)
T ss_dssp HHHHHHHHHHSCTTT--SCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSS-SCCEEEEEEEE---C
T ss_pred HHHHHHHhhCCChhh--cCHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCC-CCCeEEEEEEC---C
Confidence 356789999999732 244578888888899999 888876542 12222333323332 12333322221 1
Q ss_pred CCCCCCCcCCCce-----eeCCCCc-EE-ecCcccch---hHHHHHHHHHHHHHHcCCCCceeEEEEeecCcccC
Q 013216 104 SEPSKWSHHPFGA-----HLDSQGN-IF-ARGSQDMK---CVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG 168 (447)
Q Consensus 104 ~~~~~W~~~Pf~~-----~~~~~g~-l~-GrG~~D~k---~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g 168 (447)
... .+ ..|... ++|.+|. |- +.|=.+|| +|.|+.+.+++++.+.+ ++.+|+.+....|-.-
T Consensus 237 ~~~-~~-~~~i~LVGKGITFDsGG~slKp~~~M~~MK~DMgGAAaVlg~~~aia~l~--l~vnv~~~i~~~ENm~ 307 (484)
T 1lam_A 237 SPN-AS-EPPLVFVGKGITFDSGGISIKAAANMDLMRADMGGAATICSAIVSAAKLD--LPINIVGLAPLCENMP 307 (484)
T ss_dssp SSS-TT-SCCEEEEECEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEECC
T ss_pred CCC-CC-CCcEEEEecceEEcCCCcCCcCccchhhhhccchHHHHHHHHHHHHHHcC--CCeeEEEEEEeeccCC
Confidence 100 00 112111 1111111 11 11113333 77889999999999986 5689999988888643
No 81
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=70.66 E-value=36 Score=33.81 Aligned_cols=119 Identities=16% Similarity=0.049 Sum_probs=69.1
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeec----CCC-------------C-eEEEEecCCCCCCC
Q 013216 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFA----KNK-------------P-LILLKWPGSNPQLP 91 (447)
Q Consensus 30 ~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~----~~~-------------~-nl~~~~~g~~~~~~ 91 (447)
-+.+.|+|++.|.-- -.-...++...+.++++|++++.++.. .|. | -++-++.|.++..+
T Consensus 207 ~v~laRdLvn~P~N~--ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~~~ 284 (528)
T 3kr4_A 207 GTYYASQLIAAPSNY--CNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDVKK 284 (528)
T ss_dssp HHHHHHHHHHSCTTT--SCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCCCE
T ss_pred HHHHHHHHhhCCccc--cCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCCCC
Confidence 466889999999732 344577888888888899999876642 121 2 12233444332234
Q ss_pred eEEEeeccccCCCCCCCCCcCCCceeeCCCCc-EEe-cC--cccch---hHHHHHHHHHHHHHHcCCCCceeEEEEeecC
Q 013216 92 SILLNSHTDVVPSEPSKWSHHPFGAHLDSQGN-IFA-RG--SQDMK---CVGMQYLEAIRRLKASGFQPVRSVYLSFVPD 164 (447)
Q Consensus 92 ~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~-l~G-rG--~~D~k---~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~ 164 (447)
+|+|.|-==| ++.+|. |-- .| -.+|| +|.|+.+++++++.+.+ ..+.+|..+....
T Consensus 285 ~iaLVGKGIT----------------FDsGG~slKp~~g~~M~~MK~DM~GAAaVlg~~~aia~l~-~~~vnv~~vi~~~ 347 (528)
T 3kr4_A 285 KIALVGKGIT----------------FDSGGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCVGTLK-PENVEIHFLSAVC 347 (528)
T ss_dssp EEEEEEEEEE----------------EECCTTSCSCSTTCCGGGGGGGGHHHHHHHHHHHHHHHHC-CSSEEEEEEEEEE
T ss_pred cEEEecCceE----------------eecCCcccCCCCCcCHHHhhcCcchHHHHHHHHHHHHhcC-CCCceEEEEEEee
Confidence 4555443111 110111 110 12 12333 67788899999998876 2357888888888
Q ss_pred ccc
Q 013216 165 EEI 167 (447)
Q Consensus 165 EE~ 167 (447)
|-.
T Consensus 348 ENm 350 (528)
T 3kr4_A 348 ENM 350 (528)
T ss_dssp EEC
T ss_pred ccC
Confidence 764
No 82
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=65.99 E-value=15 Score=34.01 Aligned_cols=57 Identities=12% Similarity=0.174 Sum_probs=44.4
Q ss_pred CCcchHHHHHcCCCeEEEccCCCCCCCCCCCC---ccccHHHHHHHHHHHHHHHHHHHhhc
Q 013216 378 ASTDARYFRERGLPAIGFSPMANTPILLHDHN---EFLNQAEYLKGIDIYESIIKAYASYV 435 (447)
Q Consensus 378 g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~---E~v~~~~l~~~~~~~~~~l~~l~~~~ 435 (447)
+.+|..-|.+.|+|++.|.+.... ...|+++ |.++.+.+.+..+++..++++++...
T Consensus 242 ~~SDH~pF~~~GIP~l~~~~~~~~-~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~~~ 301 (312)
T 4f9u_A 242 VDDDHRPFLDENVPVLHLVATPFP-DVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLKRH 301 (312)
T ss_dssp CCCTTHHHHTTTCCEEEEECSSCC-TTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCchHHHHHCCCCEEEEECCCCC-CCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 457888888899999977665443 2468765 55889999999999999998887664
No 83
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=64.41 E-value=68 Score=31.67 Aligned_cols=117 Identities=17% Similarity=0.160 Sum_probs=68.5
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHC-CCceEEEeec----CCCCeEE--------------EEecCCCCCC
Q 013216 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEAL-SLESQTLEFA----KNKPLIL--------------LKWPGSNPQL 90 (447)
Q Consensus 30 ~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~-G~~~~~~~~~----~~~~nl~--------------~~~~g~~~~~ 90 (447)
-+.+.|+|++.|.-- -.-...++++++.++++ |++++.++.. .+.+.++ -++.|.+ ..
T Consensus 178 ~~~~aRdL~n~P~n~--~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~-~~ 254 (490)
T 3jru_B 178 GVEFARELGNLPPNY--CTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGG-DA 254 (490)
T ss_dssp HHHHHHHHHHSCTTT--SCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTT-TS
T ss_pred HHHHHHHhhcCCccc--cCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCC-CC
Confidence 466789999998732 34457788888888887 9998876542 1222222 2333332 22
Q ss_pred CeEEEeeccccCCCCCCCCCcCCCceeeCCCCc-EE-ecCcccc---hhHHHHHHHHHHHHHHcCCCCceeEEEEeecCc
Q 013216 91 PSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGN-IF-ARGSQDM---KCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDE 165 (447)
Q Consensus 91 ~~ill~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~-l~-GrG~~D~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~E 165 (447)
++|+|.|-== ++|.+|. |- +.|=.+| ++|.|+.+.+++++.+.+ ++.+|+.+....|
T Consensus 255 ~~i~LVGKGi----------------TFDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~~~i~~~E 316 (490)
T 3jru_B 255 RPYVLVGKGI----------------TFDTGGVNLKTQGGIEEMKYDMCGGATVIGTFVATVKAE--LPINLVVVVPAVE 316 (490)
T ss_dssp CCEEEEECEE----------------EEECCTTSCCCSSCGGGGGGGGHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEE
T ss_pred CcEEEEcCee----------------EecCCCccCCCcccHhhCcccchHHHHHHHHHHHHHHcC--CCcEEEEEEEeec
Confidence 3444443210 1110111 00 0111233 377889999999999986 5689998888888
Q ss_pred cc
Q 013216 166 EI 167 (447)
Q Consensus 166 E~ 167 (447)
-.
T Consensus 317 Nm 318 (490)
T 3jru_B 317 NA 318 (490)
T ss_dssp EC
T ss_pred cC
Confidence 64
No 84
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=58.58 E-value=31 Score=32.08 Aligned_cols=77 Identities=9% Similarity=-0.012 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHhcCCCCCceecC--CCcchHHHHH-cCCCeEEEccCCC-----C-CCCCCCCC---ccccHHHHHHHH
Q 013216 354 PWWNLLEEAVRKANGKLGKPEIFP--ASTDARYFRE-RGLPAIGFSPMAN-----T-PILLHDHN---EFLNQAEYLKGI 421 (447)
Q Consensus 354 ~~~~~~~~a~~~~~~~~~~~~~~~--g~~D~~~~~~-~g~p~~~~gp~~~-----~-~~~~H~~~---E~v~~~~l~~~~ 421 (447)
.+.+.+.++++.++...--+.... ..+|...|.+ .|+|++.|.+... + ....|+++ +.++.+.+.+..
T Consensus 224 ~l~~~~~~~~~~~g~~~~f~~~~~~~~~sDh~pF~~~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~~~ 303 (314)
T 3gux_A 224 SEMKKIWKKAHELGYGKYFVKEDGGETVDDHIYVNKLARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVG 303 (314)
T ss_dssp HHHHHHHHHHHHHTCTTTEEEEECCCCCCHHHHHHHHSCCCEEEEEBCC--------------------CBCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCccccccccCCCCCCccHHHHhcCCCceEEEecccccccccCCCCCCCCCcCcchhCCHHHHHHHH
Confidence 556677777777765320111112 3589888888 7999998766421 1 13578865 678899999999
Q ss_pred HHHHHHHHH
Q 013216 422 DIYESIIKA 430 (447)
Q Consensus 422 ~~~~~~l~~ 430 (447)
++...+++.
T Consensus 304 ~~~~~~~y~ 312 (314)
T 3gux_A 304 QTVMDVIYN 312 (314)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 988888764
No 85
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=54.81 E-value=61 Score=29.75 Aligned_cols=76 Identities=12% Similarity=0.037 Sum_probs=45.6
Q ss_pred hHHHHHHHHHHHhcCCCCCce--ecCCCcchHHHHH-cCCCeEEEccCCCC---CCCCCCCCc---cccHHHHHHHHHHH
Q 013216 354 PWWNLLEEAVRKANGKLGKPE--IFPASTDARYFRE-RGLPAIGFSPMANT---PILLHDHNE---FLNQAEYLKGIDIY 424 (447)
Q Consensus 354 ~~~~~~~~a~~~~~~~~~~~~--~~~g~~D~~~~~~-~g~p~~~~gp~~~~---~~~~H~~~E---~v~~~~l~~~~~~~ 424 (447)
.+.+.+.+.....+.....+. ....++|...|.+ .|+|++.|.+.... ....|++.- +++.+.|....++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sDh~~F~~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~vg~~v 301 (309)
T 4fuu_A 222 DINKKVWKAAKKAGYGKTFIDERGDTITDDHLFINRLARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKAVGQTV 301 (309)
T ss_dssp HHHHHHHHHHHHTTCTTTEEEEECCCCCCHHHHHHHHTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcccccccCCCCCCCChHHHHhcCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHHHHHHH
Confidence 455566666666654321111 2224678888875 59999977554221 235688764 57788888777777
Q ss_pred HHHHH
Q 013216 425 ESIIK 429 (447)
Q Consensus 425 ~~~l~ 429 (447)
..+++
T Consensus 302 l~~ly 306 (309)
T 4fuu_A 302 LEVIY 306 (309)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66665
No 86
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=53.84 E-value=26 Score=24.32 Aligned_cols=65 Identities=18% Similarity=0.233 Sum_probs=44.5
Q ss_pred CceEEEEeeecCCCCCHHHHHHHHHHHhcc-CCCCceEeeccccccccccccCCCCcccccCCCChHHHHHHHHHHHhcC
Q 013216 290 SEAEAGFDIRVPPTTDAESLERRIVEEWAP-ASRNMTFELGQFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANG 368 (447)
Q Consensus 290 ~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~ 368 (447)
+--++.+|+|...+...+...+.+++.+.. .+..+.++ +. .... ...+++.+.+.+.+.++|+
T Consensus 15 dgqeieidirvstgkeleralqelekalaragarnvqit---is---------aend----eqakelleliarllqklgy 78 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARAGARNVQIT---IS---------AEND----EQAKELLELIARLLQKLGY 78 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHHTCSEEEEE---EE---------CSSH----HHHHHHHHHHHHHHHHHTC
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhccccceEEE---EE---------ecCh----HHHHHHHHHHHHHHHHhCC
Confidence 556889999999999999999999887763 33455555 22 1111 1124677777788888887
Q ss_pred CC
Q 013216 369 KL 370 (447)
Q Consensus 369 ~~ 370 (447)
..
T Consensus 79 kd 80 (96)
T 2jvf_A 79 KD 80 (96)
T ss_dssp SE
T ss_pred Cc
Confidence 64
No 87
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=52.42 E-value=8.4 Score=38.34 Aligned_cols=40 Identities=10% Similarity=0.079 Sum_probs=28.3
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCce
Q 013216 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLES 67 (447)
Q Consensus 26 ~~~~~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~ 67 (447)
..+++.+..++|+++=.-| +.+..+.+.+.++|++.||..
T Consensus 31 ~~~~~~~~a~~~~~Fl~~s--pT~~hav~~~~~~L~~aGF~~ 70 (496)
T 3vat_A 31 RKEAVQAAARELLKFVNRS--PSPFHAVAECRSRLLQAGFHE 70 (496)
T ss_dssp HHHHHHHHHHHHHHHHHTC--SSHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHcC--CCHHHHHHHHHHHHHHCcCeE
Confidence 4445555666666665543 456788899999999999853
No 88
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=51.57 E-value=22 Score=34.95 Aligned_cols=123 Identities=12% Similarity=0.022 Sum_probs=71.4
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecC---CCCeEEEEecCCCCCCCeEEEeeccccCCCCC
Q 013216 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAK---NKPLILLKWPGSNPQLPSILLNSHTDVVPSEP 106 (447)
Q Consensus 30 ~~~~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~---~~~nl~~~~~g~~~~~~~ill~~H~Dtvp~~~ 106 (447)
-+.+.|+|++.|.-. -.-...++++++.++++|++++.++... +.+.+++.=+|+. ..|.++.. ++ . +..
T Consensus 169 ~~~laRdLvn~P~N~--~tP~~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~-~pPrli~l-~y-~-~~~- 241 (482)
T 3ij3_A 169 TIYLIRDLINTPAED--MGPSELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGS-RPPLLIDL-KW-G-DIK- 241 (482)
T ss_dssp HHHHHHHHHHSCGGG--SSHHHHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSS-SCCEEEEE-EE-S-CTT-
T ss_pred HHHHHHHHhcCCccc--cCHHHHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCC-CCCEEEEE-Ee-C-CCC-
Confidence 467889999999732 2445778888888899999998765321 2222333324443 22444433 33 1 111
Q ss_pred CCCCcCCCceeeCCCCcEEecCc---------ccc---hhHHHHHHHHHHHHHHcCCCCceeEEEEeecCccc
Q 013216 107 SKWSHHPFGAHLDSQGNIFARGS---------QDM---KCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (447)
Q Consensus 107 ~~W~~~Pf~~~~~~~g~l~GrG~---------~D~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (447)
.+|....= .|.-|=-|- .+| ++|.|+.+++++++.+.+ ++.+|+.+....|-.
T Consensus 242 ----~~~i~LVG--KGITFDsGGlslKp~~~M~~MK~DMgGAAaVlg~~~aia~l~--lpvnv~~ii~~~ENm 306 (482)
T 3ij3_A 242 ----APKVTLVG--KGVCFDSGGLDIKTPGGMLLMKKDMGGAAHALGLARMIMLQQ--LPVRLRLLIPAVENA 306 (482)
T ss_dssp ----SCEEEEEE--CEEEEECCTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEEC
T ss_pred ----CCeEEEEc--cceEeecCCccCcCccchhhccccchHHHHHHHHHHHHHHcC--CCceEEEEEEeeccC
Confidence 12221111 122222221 222 377788999999999986 568999998888864
No 89
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=49.49 E-value=38 Score=31.62 Aligned_cols=53 Identities=17% Similarity=0.190 Sum_probs=38.8
Q ss_pred CcchHHHHHcCCCeEEEccCCCCCCCCCCCC---ccccHHHHHHHHHHHHHHHHHHH
Q 013216 379 STDARYFRERGLPAIGFSPMANTPILLHDHN---EFLNQAEYLKGIDIYESIIKAYA 432 (447)
Q Consensus 379 ~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~---E~v~~~~l~~~~~~~~~~l~~l~ 432 (447)
.+|..-|.+.|+|++.|-+.... ...|+++ |.++.+.+....+++..++.+.+
T Consensus 268 ~SDH~pF~~~GIP~l~~i~~~~~-~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~EyL 323 (330)
T 4fai_A 268 EDDHIPFLRRNVPILHLIPVPFP-SVWHTPDDNASVIDYATTDNLALIIRLFALEYL 323 (330)
T ss_dssp CSTTHHHHTTTCCEEEECCSSCC-TTTTSTTSSGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHCCCCEEEEECCCCC-CCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHH
Confidence 47888888899999977554432 2568876 45788888888888887776654
No 90
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=49.32 E-value=39 Score=31.63 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=43.0
Q ss_pred CCcchHHHHHcCCCeEEEccCCCCCCCCCCCC---ccccHHHHHHHHHHHHHHHHHHHh
Q 013216 378 ASTDARYFRERGLPAIGFSPMANTPILLHDHN---EFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 378 g~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~---E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
+.+|-.-|.+.|+|++.+.+.... ...|++. |.++.+.+.+..+++..++.+.+.
T Consensus 272 ~~SDH~pF~~~GIP~~~~~~~~f~-~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~Eyl~ 329 (330)
T 3pb6_X 272 VEDDHIPFLRRGVPVLHLISTPFP-AVWHTPADTEVNLHPPTVHNLCRILAVFLAEYLG 329 (330)
T ss_dssp CSCTTHHHHTTTCCEEEEECSSCC-TTTTSTTCSGGGSCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCchHhHHHCCCCEEEEEcCCCC-CCCCCCcCchhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 578988888899999988765432 3578865 468889999999999988877654
No 91
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=41.17 E-value=1.1e+02 Score=29.54 Aligned_cols=56 Identities=18% Similarity=0.242 Sum_probs=43.9
Q ss_pred CCCcchHHHHHcC--CCeEEEccCCCCCCCCCCCCc---cccHHHHHHHHHHHHHHHHHHH
Q 013216 377 PASTDARYFRERG--LPAIGFSPMANTPILLHDHNE---FLNQAEYLKGIDIYESIIKAYA 432 (447)
Q Consensus 377 ~g~~D~~~~~~~g--~p~~~~gp~~~~~~~~H~~~E---~v~~~~l~~~~~~~~~~l~~l~ 432 (447)
+.++|-..|...| +|++.|.-...+....|++.- +++.+.+..+.+++.+++..|.
T Consensus 294 ~~GSDh~qF~spG~dIPv~~~~r~~~~~peYHTs~Dtld~ISpe~L~~s~~iv~~~i~~Le 354 (435)
T 3k9t_A 294 PWGSDERQFSSPGINLSVGSLMRSCYGFDGYHTSADNLCYMNKDGLADSYKTYLEVIYTIE 354 (435)
T ss_dssp SCSSTHHHHTSTTTCCCEEEEESSCTTCTTTTBTTSSGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcchhHhhCCCCCCEEEEecCCCCCcccCCCcCChhhCCHHHHHHHHHHHHHHHHHhh
Confidence 3779999999999 999988665433335788664 5778899999999999988774
No 92
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=39.53 E-value=67 Score=29.82 Aligned_cols=54 Identities=20% Similarity=0.291 Sum_probs=40.7
Q ss_pred CcchHHHHHcCCCeEEEccCCCCCCCCCCCC---ccccHHHHHHHHHHHHHHHHHHHh
Q 013216 379 STDARYFRERGLPAIGFSPMANTPILLHDHN---EFLNQAEYLKGIDIYESIIKAYAS 433 (447)
Q Consensus 379 ~~D~~~~~~~g~p~~~~gp~~~~~~~~H~~~---E~v~~~~l~~~~~~~~~~l~~l~~ 433 (447)
.+|..-|.+.|+|++.|...... ...|++. ++++.+.+.+..+++..++.+++.
T Consensus 272 ~sDh~~F~~~GiP~~~~~~~~~~-~~yHt~~Dt~~~ld~~~l~~~~~~~~~~v~eyl~ 328 (329)
T 2afw_A 272 QDDHIPFLRRGVPVLHLIPSPFP-EVWHTMDDNEENLDESTIDNLNKILQVFVLEYLH 328 (329)
T ss_dssp CSTTHHHHTTTCCEEEECCSSCC-TTTTSTTCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHhHHHCCCCEEEEEcCCCC-CCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 47888888889999988765432 3578864 458888889999988888777654
No 93
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=21.72 E-value=2.2e+02 Score=28.61 Aligned_cols=68 Identities=15% Similarity=0.036 Sum_probs=40.7
Q ss_pred HHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEE------------EeecCCCCeEEEEecCCC--CCCC-eEEEee
Q 013216 33 RFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQT------------LEFAKNKPLILLKWPGSN--PQLP-SILLNS 97 (447)
Q Consensus 33 ~l~~l~~ips~s~~~~e~~~~~~i~~~l~~~G~~~~~------------~~~~~~~~nl~~~~~g~~--~~~~-~ill~~ 97 (447)
..++|+.+=.-| +.+..+.+.+.++|++.||..-. .....+..+|+|..-|.. ++.. --++.+
T Consensus 9 ~a~~~~~Fl~~s--pT~~HaV~~~~~~L~~aGF~~L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~IvgA 86 (571)
T 4eme_A 9 YAQDALKFIQRS--GSNFLACKNLKERLENNGFINLSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILISIG 86 (571)
T ss_dssp HHHHHHHHHHHC--CSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEEEEE
T ss_pred HHHHHHHHHHcC--CCHHHHHHHHHHHHHHCcCEEccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEEEEE
Confidence 334444443332 45678888999999999985310 000112346777655654 3334 568899
Q ss_pred ccccC
Q 013216 98 HTDVV 102 (447)
Q Consensus 98 H~Dtv 102 (447)
|.|.-
T Consensus 87 HtDSP 91 (571)
T 4eme_A 87 HIDSC 91 (571)
T ss_dssp ECCCC
T ss_pred eccCC
Confidence 99985
Done!